BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043580
(665 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225432514|ref|XP_002277532.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
mitochondrial [Vitis vinifera]
Length = 694
Score = 1009 bits (2610), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 467/664 (70%), Positives = 568/664 (85%), Gaps = 1/664 (0%)
Query: 2 PLDHFHSVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQ 61
P+DH + FN K + Q+SDYEL LVSAL+ CS+ +A+SQGQQIHSL+FKSGL SN F++
Sbjct: 32 PIDHLRAFFNGNK-DTQHSDYELTLVSALKSCSSLLALSQGQQIHSLVFKSGLLSNIFVK 90
Query: 62 NSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCV 121
NSLI+ Y KC LIS A+S+FD+CS LDPV+CNIM++GY+++ L++AR +F+K PIK CV
Sbjct: 91 NSLISFYVKCRLISNARSLFDTCSVLDPVSCNIMLAGYVKSGSLDNARHLFEKMPIKGCV 150
Query: 122 SYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLV 181
SYT+M+MG AQN+CW EA+ VF+DMR GVIPNEVTLASVIS+ H+GGI CRMLH L
Sbjct: 151 SYTTMVMGLAQNNCWLEAIGVFKDMRFAGVIPNEVTLASVISAYSHVGGILNCRMLHALS 210
Query: 182 IKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELAR 241
KL ++ I++TNL++MYCVCSSL AR LFDE+ ERN+V+WNVMLNG++K+GLV+LAR
Sbjct: 211 FKLGLEALNIVATNLVHMYCVCSSLGNARVLFDEIPERNVVTWNVMLNGYSKSGLVDLAR 270
Query: 242 ELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAM 301
+LFERIP+KDVVSWGT+IDGY+Q+ERL EAL MYR+ML G+ PN+VMIVDLISACGR M
Sbjct: 271 DLFERIPAKDVVSWGTIIDGYVQIERLGEALRMYRSMLRTGVGPNEVMIVDLISACGRTM 330
Query: 302 AFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIA 361
A EG Q H IIV+ GFDCYDFIQATIIHFYAACG INLA LQFELG KDH++SWNALI+
Sbjct: 331 AVSEGQQFHGIIVRTGFDCYDFIQATIIHFYAACGEINLAFLQFELGSKDHVSSWNALIS 390
Query: 362 GFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEIT 421
GF+RNGMIE ARQLF+ M +RDV+SWS+MISGY+QNEQP++AL+LFH MV GV+PNEIT
Sbjct: 391 GFVRNGMIEQARQLFDEMPERDVFSWSSMISGYSQNEQPDLALQLFHEMVAGGVQPNEIT 450
Query: 422 MVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIR 481
MVSVF AIA+ GTL EGRWAHEY+L+NSI LNDNL+AA+IDMYAKCGSI A ++FY I+
Sbjct: 451 MVSVFSAIATLGTLMEGRWAHEYILSNSIPLNDNLNAALIDMYAKCGSITIALQLFYEIQ 510
Query: 482 DRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLG 541
DR +SVSPWNAIICGLAMHG AN++LK++S L++ IK NSITFIGVLS CCHAGLVD G
Sbjct: 511 DRVSSVSPWNAIICGLAMHGHANVSLKLFSQLQRVRIKPNSITFIGVLSACCHAGLVDTG 570
Query: 542 ERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASR 601
E+YFK MK++YN+EP++KHYGCM+DLLGRAG+L++A E+IR MPMKADVVIWGTLLAA R
Sbjct: 571 EKYFKGMKNLYNIEPNIKHYGCMIDLLGRAGRLKEAAEMIRKMPMKADVVIWGTLLAACR 630
Query: 602 IHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGF 661
HGNVE+GERAA++LA L SHG RVLLSNIYADAGRW+DAF +R+ M+ MK+ PG
Sbjct: 631 THGNVEIGERAAENLAKLDISHGAGRVLLSNIYADAGRWDDAFLVRRAMQSQRMKKSPGC 690
Query: 662 SGVV 665
SGVV
Sbjct: 691 SGVV 694
>gi|255551485|ref|XP_002516788.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543876|gb|EEF45402.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 710
Score = 992 bits (2564), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 457/663 (68%), Positives = 570/663 (85%), Gaps = 1/663 (0%)
Query: 2 PLDHFHSVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQ 61
P H +S+ N K ++ +YEL LVSAL++CS H+ +SQG+QIH L+ KSGL SN FIQ
Sbjct: 46 PFLHLNSLLNP-KTGQRHFNYELVLVSALKFCSDHLFLSQGKQIHCLVSKSGLGSNNFIQ 104
Query: 62 NSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCV 121
NSLIN+Y KCGL+ AKS+FD C DPV+ N+MISGY+++ +L+ A E+FD+ P+K CV
Sbjct: 105 NSLINMYGKCGLLVDAKSIFDVCPRSDPVSYNVMISGYVKSGQLDYACELFDEMPVKGCV 164
Query: 122 SYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLV 181
SYT+MIMGF+QN+CW +A+E+F+ MR +GV+PNEVT+A+++S+ H GGIW CRMLHGLV
Sbjct: 165 SYTTMIMGFSQNECWNQAVELFKQMRNVGVVPNEVTIATLVSAYSHFGGIWACRMLHGLV 224
Query: 182 IKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELAR 241
IK++ + FV++STNLL MYCVCSSLVEAR+LFDEM E+NIVSWNVMLNG++KAG V+ AR
Sbjct: 225 IKMLFEEFVLVSTNLLRMYCVCSSLVEARALFDEMPEKNIVSWNVMLNGYSKAGFVDSAR 284
Query: 242 ELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAM 301
+FERIP+KD+V+WGT+IDGY++VER++EAL MYR+M+ G PNDVM+VDLIS CGR M
Sbjct: 285 VVFERIPNKDLVTWGTIIDGYVRVERINEALMMYRSMISAGWEPNDVMMVDLISGCGRTM 344
Query: 302 AFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIA 361
A EG Q+ S +VK GFDCYDFIQ+TIIH YAACGRIN A LQF +G K+++ASWNALIA
Sbjct: 345 AMTEGQQLLSAVVKMGFDCYDFIQSTIIHLYAACGRINEACLQFRIGSKENVASWNALIA 404
Query: 362 GFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEIT 421
G++RN MI+ A +LFN M +RDV+SWS MISGY QNEQPN+ALELFH MV +G+KPNE+T
Sbjct: 405 GYVRNRMIDRAMELFNEMPERDVFSWSTMISGYTQNEQPNLALELFHKMVASGIKPNEVT 464
Query: 422 MVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIR 481
MVSV AIA+SGTLKEGRWAHEYV NNSIT++DNLSAAIIDMYAKCGSIN A EVFY IR
Sbjct: 465 MVSVLSAIATSGTLKEGRWAHEYVHNNSITVSDNLSAAIIDMYAKCGSINNALEVFYEIR 524
Query: 482 DRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLG 541
++ ++VSPWNAIICGLA+HG ANL+LKI+SDLE+R+IKLN+ITFIGVL+ CCH GLV+ G
Sbjct: 525 EKASTVSPWNAIICGLAVHGHANLSLKIFSDLERRHIKLNAITFIGVLTACCHVGLVESG 584
Query: 542 ERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASR 601
+R+F SMKS ++++PD+KHYGCMVDLLGRAG+LE+AEE+IRSMPMKADVVIWGTLLAA R
Sbjct: 585 KRHFMSMKSEHSIDPDIKHYGCMVDLLGRAGRLEEAEEMIRSMPMKADVVIWGTLLAACR 644
Query: 602 IHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGF 661
HGNV+VGERAA++LA L+PSHG SRVLLSN+YADAG+WEDAF +R+ M+ M+RLPG+
Sbjct: 645 THGNVDVGERAAENLARLEPSHGASRVLLSNMYADAGKWEDAFLVRRAMQSHRMQRLPGY 704
Query: 662 SGV 664
SGV
Sbjct: 705 SGV 707
>gi|449516814|ref|XP_004165441.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
mitochondrial-like isoform 1 [Cucumis sativus]
Length = 703
Score = 920 bits (2379), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/664 (64%), Positives = 544/664 (81%), Gaps = 1/664 (0%)
Query: 2 PLDHFHSVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQ 61
PL + S N + ++ + D EL++VSAL+YC++ A+S GQQIH+++ K G SNTFI
Sbjct: 41 PLQNLSSFLNGRPSS-SSLDCELSVVSALKYCASSSAISSGQQIHAIVLKYGFNSNTFIL 99
Query: 62 NSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCV 121
NSLIN+Y KCGL+S A+ +FDSCS LD V+CNIM+SGY++ +L +AR++F K P + CV
Sbjct: 100 NSLINMYVKCGLLSSARLLFDSCSVLDSVSCNIMMSGYVKLRQLENARQLFAKMPERGCV 159
Query: 122 SYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLV 181
SYT+MI+G AQNDCW EA+EVF+DMR GV PNEVT+ASV+S+ H+GGIW CRMLH LV
Sbjct: 160 SYTTMILGLAQNDCWGEAIEVFKDMRSAGVAPNEVTMASVMSACSHIGGIWNCRMLHALV 219
Query: 182 IKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELAR 241
IKL G V+ISTNLL+MYCV SSL + + LF+EM RN VSWNVML G+ K+GLV+ AR
Sbjct: 220 IKLHFFGLVLISTNLLHMYCVFSSLKDTKRLFNEMPVRNTVSWNVMLKGYVKSGLVDQAR 279
Query: 242 ELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAM 301
ELFERIP +DV SW MIDG++Q++RL +AL +Y AM + PN+V+IVDL+SACG+++
Sbjct: 280 ELFERIPERDVFSWAIMIDGFVQMKRLRKALLLYSAMRKSDLHPNEVLIVDLLSACGQSV 339
Query: 302 AFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIA 361
+ EG Q HS+IVK GF C+DFIQATII FYAAC RI+LA LQ+++ K H+ S N +I
Sbjct: 340 SIEEGRQFHSLIVKNGFVCFDFIQATIISFYAACRRIDLAYLQYQMSDKSHLTSSNVMIV 399
Query: 362 GFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEIT 421
GF +NGMI+ ARQ+F+ M ++DV+SWS MISGYAQNE P++AL+LFHGM+D+ V+PNEIT
Sbjct: 400 GFTKNGMIDQARQIFDMMPEKDVFSWSTMISGYAQNELPDVALDLFHGMIDSKVEPNEIT 459
Query: 422 MVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIR 481
MVSVF AIA+ G L EGRWAHEYV N I LNDNLSAAIIDMYAKCGSI+TA +VF I+
Sbjct: 460 MVSVFSAIAALGKLPEGRWAHEYVCNKVIPLNDNLSAAIIDMYAKCGSIDTALDVFRQIK 519
Query: 482 DRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLG 541
D+T++VSPWNAIICGLAMHG ANL+L+I+S+L++R+IKLNSITF+GVLS CCHAGLV++G
Sbjct: 520 DKTSTVSPWNAIICGLAMHGHANLSLEIFSNLQRRSIKLNSITFLGVLSACCHAGLVEVG 579
Query: 542 ERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASR 601
ERYF SMK+ + VEP++KHYGC+VDLLGR G+L +AEE++R+MPMKADVVIWGTLLA+SR
Sbjct: 580 ERYFWSMKTQHGVEPNIKHYGCLVDLLGRVGRLREAEEIVRTMPMKADVVIWGTLLASSR 639
Query: 602 IHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGF 661
HG VE+GERAA++LA LQPSHGP RVLLSN+YADAG WEDA +R+ ++ M R PG+
Sbjct: 640 THGEVEIGERAAENLARLQPSHGPGRVLLSNLYADAGLWEDAALVRRAIQSQRMIRSPGY 699
Query: 662 SGVV 665
SGVV
Sbjct: 700 SGVV 703
>gi|356557876|ref|XP_003547236.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
mitochondrial-like [Glycine max]
Length = 912
Score = 920 bits (2378), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/662 (64%), Positives = 541/662 (81%), Gaps = 3/662 (0%)
Query: 4 DHFHSVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNS 63
HF +F + + + + + ELALVSAL+YCS+ SQG+Q+HSL+ K GL SNTFIQNS
Sbjct: 253 QHFIGIFCNARLHQNHYECELALVSALKYCSSS---SQGRQLHSLVLKLGLHSNTFIQNS 309
Query: 64 LINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSY 123
LIN+YAK G I A+ +FD+C TL+P++CNIM+ GY + +L++AR++FD P K CVSY
Sbjct: 310 LINMYAKRGSIKDAQLLFDACPTLNPISCNIMVCGYAKAGQLDNARKLFDIMPDKGCVSY 369
Query: 124 TSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIK 183
T+MIMG QN+C+REALEVF+DMR GV+PN++TL +VI + H G I CRM+H + IK
Sbjct: 370 TTMIMGLVQNECFREALEVFKDMRSDGVVPNDLTLVNVIYACSHFGEILNCRMIHAIAIK 429
Query: 184 LMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELAREL 243
L ++G V++STNL+ YC+CS + EAR LFD M E N+VSWNVMLNG+AKAGLV++AREL
Sbjct: 430 LFVEGLVLVSTNLMRAYCLCSGVGEARRLFDRMPEVNLVSWNVMLNGYAKAGLVDMAREL 489
Query: 244 FERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAF 303
FER+P KDV+SWGTMIDGY+ + RL EAL MYRAML G+A N++++V+L+SACGR A
Sbjct: 490 FERVPDKDVISWGTMIDGYILMNRLHEALVMYRAMLRSGLALNEILVVNLVSACGRLNAI 549
Query: 304 GEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGF 363
G+G Q+H ++VK GFDCY+FIQ TIIHFYAACG ++LA LQFE+G KDH+ SWNAL++GF
Sbjct: 550 GDGWQLHGMVVKKGFDCYNFIQTTIIHFYAACGMMDLACLQFEVGAKDHLESWNALVSGF 609
Query: 364 IRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMV 423
I+N M++ AR++F++M +RDV+SWS MISGYAQ +Q +ALELFH MV +G+KPNE+TMV
Sbjct: 610 IKNRMVDQARKIFDDMPERDVFSWSTMISGYAQTDQSRIALELFHKMVASGIKPNEVTMV 669
Query: 424 SVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDR 483
SVF AIA+ GTLKEGRWAHEY+ N SI LNDNL AA+IDMYAKCGSIN+A + F IRD+
Sbjct: 670 SVFSAIATLGTLKEGRWAHEYICNESIPLNDNLRAALIDMYAKCGSINSALQFFNQIRDK 729
Query: 484 TTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGER 543
T SVSPWNAIICGLA HG A++ L ++SD+++ NIK N ITFIGVLS CCHAGLV+ G R
Sbjct: 730 TFSVSPWNAIICGLASHGHASMCLDVFSDMQRYNIKPNPITFIGVLSACCHAGLVEPGRR 789
Query: 544 YFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIH 603
F+ MKS YNVEPD+KHYGCMVDLLGRAG LE+AEE+IRSMPMKAD+VIWGTLLAA R H
Sbjct: 790 IFRIMKSAYNVEPDIKHYGCMVDLLGRAGLLEEAEEMIRSMPMKADIVIWGTLLAACRTH 849
Query: 604 GNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSG 663
G+V +GERAA+SLAGL PSHG +VLLSNIYADAGRWED +R+ +++ M+R+PG SG
Sbjct: 850 GDVNIGERAAESLAGLAPSHGGGKVLLSNIYADAGRWEDVSLVRRAIQNQRMERMPGCSG 909
Query: 664 VV 665
V+
Sbjct: 910 VI 911
>gi|449465220|ref|XP_004150326.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
mitochondrial-like [Cucumis sativus]
Length = 874
Score = 915 bits (2364), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/645 (65%), Positives = 535/645 (82%)
Query: 21 DYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSM 80
D EL++VSAL+YC++ A+S GQQIH+++ K G SNTFI NSLIN+Y KCGL+S A+ +
Sbjct: 230 DCELSVVSALKYCASSSAISSGQQIHAIVLKYGFNSNTFILNSLINMYVKCGLLSSARLL 289
Query: 81 FDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREAL 140
FDSCS LD V+CNIM+SGY++ +L +AR++F K P + CVSYT+MI+G AQNDCW EA+
Sbjct: 290 FDSCSVLDSVSCNIMMSGYVKLRQLENARQLFAKMPERGCVSYTTMILGLAQNDCWGEAI 349
Query: 141 EVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMY 200
EVF+DMR GV PNEVT+ASV+S+ H+GGIW CRMLH LVIKL G V+ISTNLL+MY
Sbjct: 350 EVFKDMRSAGVAPNEVTMASVMSACSHIGGIWNCRMLHALVIKLHFFGLVLISTNLLHMY 409
Query: 201 CVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMID 260
CV SSL + + LF+EM RN VSWNVML G+ K+GLV+ ARELFERIP +DV SW MID
Sbjct: 410 CVFSSLKDTKRLFNEMPVRNTVSWNVMLKGYVKSGLVDQARELFERIPERDVFSWAIMID 469
Query: 261 GYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDC 320
G++Q++RL +AL +Y AM + PN+V+IVDL+SACG++++ EG Q HS+IVK GF C
Sbjct: 470 GFVQMKRLRKALLLYSAMRKSDLHPNEVLIVDLLSACGQSVSIEEGRQFHSLIVKNGFVC 529
Query: 321 YDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ 380
+DFIQATII FYAAC RI+LA LQ+++ K H+ S N +I GF +NGMI+ ARQ+F+ M
Sbjct: 530 FDFIQATIISFYAACRRIDLAYLQYQMSDKSHLTSSNVMIVGFTKNGMIDQARQIFDMMP 589
Query: 381 KRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRW 440
++DV+SWS MISGYAQNE P++AL+LFHGM+D+ V+PNEITMVSVF AIA+ G L EGRW
Sbjct: 590 EKDVFSWSTMISGYAQNELPDVALDLFHGMIDSKVEPNEITMVSVFSAIAALGKLPEGRW 649
Query: 441 AHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMH 500
AHEYV N I LNDNLSAAIIDMYAKCGSI+TA +VF I+D+T++VSPWNAIICGLAMH
Sbjct: 650 AHEYVCNKVIPLNDNLSAAIIDMYAKCGSIDTALDVFRQIKDKTSTVSPWNAIICGLAMH 709
Query: 501 GDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKH 560
G ANL+L+I+S+L++R+IKLNSITF+GVLS CCHAGLV++GERYF SMK+ + VEP++KH
Sbjct: 710 GHANLSLEIFSNLQRRSIKLNSITFLGVLSACCHAGLVEVGERYFWSMKTQHGVEPNIKH 769
Query: 561 YGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQ 620
YGC+VDLLGR G+L +AEE++R+MPMKADVVIWGTLLA+SR HG VE+GERAA++LA LQ
Sbjct: 770 YGCLVDLLGRVGRLREAEEIVRTMPMKADVVIWGTLLASSRTHGEVEIGERAAENLARLQ 829
Query: 621 PSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGVV 665
PSHGP RVLLSN+YADAG WEDA +R+ ++ M R PG+SGVV
Sbjct: 830 PSHGPGRVLLSNLYADAGLWEDAALVRRAIQSQRMIRSPGYSGVV 874
>gi|357447703|ref|XP_003594127.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124365519|gb|ABN09753.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355483175|gb|AES64378.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 727
Score = 905 bits (2340), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/661 (64%), Positives = 533/661 (80%)
Query: 5 HFHSVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSL 64
HF +F + + + + D ELALVSAL+ CS+ +SQG+QIHSLIFK GL NTFIQNSL
Sbjct: 35 HFIHIFTNARNHQNHHDSELALVSALKSCSSLSFISQGRQIHSLIFKLGLHFNTFIQNSL 94
Query: 65 INLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYT 124
IN+YAKCG I A+ +FD +TLD V+CNIM+SGY+RN ++++AR++FD P K CVSYT
Sbjct: 95 INMYAKCGDIKNAQLLFDGFATLDSVSCNIMVSGYVRNGQIDNARKLFDVMPNKGCVSYT 154
Query: 125 SMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKL 184
+MIMGF QN +REALEVF+DMR GV+PN++TL +VIS+ HLG + CRM+HGLV+K+
Sbjct: 155 TMIMGFVQNGFFREALEVFKDMRSCGVVPNDLTLVNVISACSHLGEVLNCRMVHGLVVKM 214
Query: 185 MIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELF 244
+ G VI+STNL++ YC+CS + EAR LFDEM ERN+V+WNVMLNG+AK GLV+ ARELF
Sbjct: 215 FVVGLVIVSTNLMHAYCLCSGVREARRLFDEMPERNLVTWNVMLNGYAKTGLVDEARELF 274
Query: 245 ERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFG 304
+ I KDV+SWGTMIDGY+Q RL EAL +YRAML G PN+VMIV+L+SACGR A
Sbjct: 275 DGICDKDVISWGTMIDGYIQKGRLREALEIYRAMLQTGHGPNEVMIVNLVSACGRGTAIV 334
Query: 305 EGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFI 364
+G Q+H +VK GFDCY+FIQ TII+FYAACG ++LA LQFE+G+KDH+ SWNAL AGFI
Sbjct: 335 DGWQLHGTVVKRGFDCYNFIQTTIIYFYAACGMMDLACLQFEVGVKDHLESWNALTAGFI 394
Query: 365 RNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVS 424
+NGM++ A + F+ M RDV+SWS MISGYAQ+E P MALELFH M+ G+KPNE+TMVS
Sbjct: 395 KNGMMDHALKTFDKMHVRDVFSWSTMISGYAQSEHPKMALELFHKMLAGGIKPNEVTMVS 454
Query: 425 VFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRT 484
VF AIA+ GTL+EG+ AHEY+ + SI NDNL AA+IDMYAKCGSIN+A + F IRD
Sbjct: 455 VFSAIATLGTLQEGKLAHEYMRSESIPFNDNLRAALIDMYAKCGSINSALQFFNQIRDEV 514
Query: 485 TSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERY 544
+SVSPWNAIICGLA HG A++ L+++SD+++ +IK N ITFIGVLS CCHAGLV+ G+R
Sbjct: 515 SSVSPWNAIICGLASHGHASMCLEVFSDMQRFHIKPNPITFIGVLSACCHAGLVESGKRI 574
Query: 545 FKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHG 604
FK+MKS YNVEPD+KHYGCM+D+LGRAG LE+AEE+IRSMPM+AD+VIWGTLLAA R HG
Sbjct: 575 FKTMKSAYNVEPDIKHYGCMIDILGRAGLLEEAEEMIRSMPMEADIVIWGTLLAACRTHG 634
Query: 605 NVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
NV +GERAA++LA L PSHG +VLLSNIYA+AG+WE+ +R M+ M R PG+SG
Sbjct: 635 NVNIGERAAENLARLAPSHGGGKVLLSNIYANAGKWEEVSFVRSVMQGQTMDREPGYSGF 694
Query: 665 V 665
V
Sbjct: 695 V 695
>gi|224107245|ref|XP_002314420.1| predicted protein [Populus trichocarpa]
gi|222863460|gb|EEF00591.1| predicted protein [Populus trichocarpa]
Length = 571
Score = 869 bits (2245), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/571 (69%), Positives = 489/571 (85%)
Query: 95 MISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPN 154
MISGY+++ L+DAR++F+ P K CVSYT+MIMGF +ND W EA++V+++MR +GV+PN
Sbjct: 1 MISGYVKSGNLDDARKLFEVMPQKGCVSYTTMIMGFVKNDFWGEAIKVYKEMRSVGVVPN 60
Query: 155 EVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFD 214
EVT+ASVIS+ +G IW+CRMLHGLVIK+M DGFV++STNLLNMYC SSL EAR+LFD
Sbjct: 61 EVTMASVISACCRVGRIWDCRMLHGLVIKMMFDGFVLVSTNLLNMYCASSSLGEARALFD 120
Query: 215 EMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTM 274
EM+E+N+VSWNVMLNG++KAG LA+E+FE IP KD+VSWGT+IDGY++VERL EAL M
Sbjct: 121 EMQEKNVVSWNVMLNGYSKAGFANLAKEVFEMIPDKDIVSWGTIIDGYVRVERLREALMM 180
Query: 275 YRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAA 334
YR M+ G+ P++V ++DLISACGRAMA EG Q+H ++VK FDCYDF+QAT+IHFY+A
Sbjct: 181 YRLMVSTGLGPSEVTMIDLISACGRAMAIVEGQQLHCVVVKTSFDCYDFVQATVIHFYSA 240
Query: 335 CGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGY 394
CGRIN A Q E G+KDH+AS NALIAGFIRN +I+ AR+LFN M +RDV+SWS MISGY
Sbjct: 241 CGRINEACFQLEFGMKDHVASRNALIAGFIRNRIIDQARELFNEMPERDVFSWSTMISGY 300
Query: 395 AQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLND 454
Q++QP MALELFH MV +G++PNE+TMVSVF AIA+ GTLKEGRWAHEYV NSI LND
Sbjct: 301 TQSDQPGMALELFHRMVTSGIRPNEVTMVSVFSAIAALGTLKEGRWAHEYVHYNSIPLND 360
Query: 455 NLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLE 514
NLSA+IIDMYAKCGSINTA EVFY IRD+ ++VSPWN IICGLA HG A L+L+IYSDL+
Sbjct: 361 NLSASIIDMYAKCGSINTALEVFYQIRDKASTVSPWNTIICGLATHGHAKLSLEIYSDLQ 420
Query: 515 KRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQL 574
+R+IKL++ITFIGVLS CCHAGLV LG+ YFKSMKS YN++PD++HYGCMVDLLG+AG+L
Sbjct: 421 RRHIKLSAITFIGVLSACCHAGLVGLGKSYFKSMKSKYNIDPDIRHYGCMVDLLGKAGRL 480
Query: 575 EDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIY 634
E+ EE+IRSMPMKADVVIWG LL+A + H N+ +GERAA++LA L PSHGPSR+LLSN+Y
Sbjct: 481 EEVEELIRSMPMKADVVIWGMLLSACKTHRNITIGERAAENLAKLDPSHGPSRILLSNLY 540
Query: 635 ADAGRWEDAFSIRKEMRDCGMKRLPGFSGVV 665
AD GRWEDAF +R+ M+ M RLPG+SGVV
Sbjct: 541 ADVGRWEDAFLVRRVMQSHRMHRLPGYSGVV 571
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 107/365 (29%), Positives = 193/365 (52%), Gaps = 4/365 (1%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E+ + S + C + + +H L+ K + + +L+N+Y + +A+++FD
Sbjct: 61 EVTMASVISACCRVGRIWDCRMLHGLVIKMMFDGFVLVSTNLLNMYCASSSLGEARALFD 120
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+ V+ N+M++GY + N A+EVF+ P K VS+ ++I G+ + + REAL +
Sbjct: 121 EMQEKNVVSWNVMLNGYSKAGFANLAKEVFEMIPDKDIVSWGTIIDGYVRVERLREALMM 180
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
+R M G+ P+EVT+ +IS+ I E + LH +V+K D + + +++ Y
Sbjct: 181 YRLMVSTGLGPSEVTMIDLISACGRAMAIVEGQQLHCVVVKTSFDCYDFVQATVIHFYSA 240
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
C + EA + + ++ S N ++ GF + +++ ARELF +P +DV SW TMI GY
Sbjct: 241 CGRINEACFQLEFGMKDHVASRNALIAGFIRNRIIDQARELFNEMPERDVFSWSTMISGY 300
Query: 263 LQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD 322
Q ++ AL ++ M+ GI PN+V +V + SA EG H + D
Sbjct: 301 TQSDQPGMALELFHRMVTSGIRPNEVTMVSVFSAIAALGTLKEGRWAHEYVHYNSIPLND 360
Query: 323 FIQATIIHFYAACGRINLARLQFELGIKDH---IASWNALIAGFIRNGMIEDARQLFNNM 379
+ A+II YA CG IN A L+ I+D ++ WN +I G +G + + ++++++
Sbjct: 361 NLSASIIDMYAKCGSINTA-LEVFYQIRDKASTVSPWNTIICGLATHGHAKLSLEIYSDL 419
Query: 380 QKRDV 384
Q+R +
Sbjct: 420 QRRHI 424
>gi|297736974|emb|CBI26175.3| unnamed protein product [Vitis vinifera]
Length = 619
Score = 855 bits (2208), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/664 (62%), Positives = 502/664 (75%), Gaps = 76/664 (11%)
Query: 2 PLDHFHSVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQ 61
P+DH + FN K + Q+SDYEL LVSAL+ CS+ +A+SQGQQIHSL+FKSGL SN F++
Sbjct: 32 PIDHLRAFFNGNK-DTQHSDYELTLVSALKSCSSLLALSQGQQIHSLVFKSGLLSNIFVK 90
Query: 62 NSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCV 121
NSLI+ Y KC LIS A+S+FD+CS LDPV+CNIM++GY+++ L++AR +F+K PIK CV
Sbjct: 91 NSLISFYVKCRLISNARSLFDTCSVLDPVSCNIMLAGYVKSGSLDNARHLFEKMPIKGCV 150
Query: 122 SYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLV 181
SYT+M+MG AQN+CW EA+ VF+DMR GVIPNEVTLASVIS+ H+GGI CRMLH L
Sbjct: 151 SYTTMVMGLAQNNCWLEAIGVFKDMRFAGVIPNEVTLASVISAYSHVGGILNCRMLHALS 210
Query: 182 IKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELAR 241
KL ++ I++TNL++MYCVCS LV+ LAR
Sbjct: 211 FKLGLEALNIVATNLVHMYCVCSRLVD------------------------------LAR 240
Query: 242 ELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAM 301
+LFERIP+KDVVSWGT+IDGY+Q+ERL EAL MYR+ML G+ PN+VMIVDLISACGR M
Sbjct: 241 DLFERIPAKDVVSWGTIIDGYVQIERLGEALRMYRSMLRTGVGPNEVMIVDLISACGRTM 300
Query: 302 AFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIA 361
A EG Q H IIV+ GFDCYDFIQATIIHFYAACG INLA LQFELG KDH++SWNALI+
Sbjct: 301 AVSEGQQFHGIIVRTGFDCYDFIQATIIHFYAACGEINLAFLQFELGSKDHVSSWNALIS 360
Query: 362 GFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEIT 421
GF+RNGMIE ARQLF+ M +RDV+SWS+MISG
Sbjct: 361 GFVRNGMIEQARQLFDEMPERDVFSWSSMISG---------------------------- 392
Query: 422 MVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIR 481
RWAHEY+L+NSI LNDNL+AA+IDMYAKCGSI A ++FY I+
Sbjct: 393 -----------------RWAHEYILSNSIPLNDNLNAALIDMYAKCGSITIALQLFYEIQ 435
Query: 482 DRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLG 541
DR +SVSPWNAIICGLAMHG AN++LK++S L++ IK NSITFIGVLS CCHAGLVD G
Sbjct: 436 DRVSSVSPWNAIICGLAMHGHANVSLKLFSQLQRVRIKPNSITFIGVLSACCHAGLVDTG 495
Query: 542 ERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASR 601
E+YFK MK++YN+EP++KHYGCM+DLLGRAG+L++A E+IR MPMKADVVIWGTLLAA R
Sbjct: 496 EKYFKGMKNLYNIEPNIKHYGCMIDLLGRAGRLKEAAEMIRKMPMKADVVIWGTLLAACR 555
Query: 602 IHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGF 661
HGNVE+GERAA++LA L SHG RVLLSNIYADAGRW+DAF +R+ M+ MK+ PG
Sbjct: 556 THGNVEIGERAAENLAKLDISHGAGRVLLSNIYADAGRWDDAFLVRRAMQSQRMKKSPGC 615
Query: 662 SGVV 665
SGVV
Sbjct: 616 SGVV 619
>gi|334187761|ref|NP_197403.2| mitochondrial editing factor 18 [Arabidopsis thaliana]
gi|223635651|sp|P0C8Q8.1|PP394_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g19020, mitochondrial; Flags: Precursor
gi|332005257|gb|AED92640.1| mitochondrial editing factor 18 [Arabidopsis thaliana]
Length = 685
Score = 790 bits (2040), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/650 (58%), Positives = 505/650 (77%), Gaps = 2/650 (0%)
Query: 18 QNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQA 77
++SD E ALVSAL C++ V+ G+QIH + KSGL+SN +I NS++N+YAKC L++ A
Sbjct: 36 ESSDTERALVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADA 95
Query: 78 KSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWR 137
+S+F + LD + NIM+ GY+R+ RL DA ++FD P + CVSYT++I G+AQN+ W
Sbjct: 96 ESVFRDHAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWS 155
Query: 138 EALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLL 197
EA+E+FR+MR LG++ NEVTLA+VIS+ HLGGIW+CRML L IKL ++G V +STNLL
Sbjct: 156 EAMELFREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLL 215
Query: 198 NMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGT 257
+MYC+C L +AR LFDEM ERN+V+WNVMLNG++KAGL+E A ELF++I KD+VSWGT
Sbjct: 216 HMYCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGT 275
Query: 258 MIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAG 317
MIDG L+ +L EAL Y ML G+ P++VM+VDL+SA R++ +GLQ+H IVK G
Sbjct: 276 MIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRG 335
Query: 318 FDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFN 377
FDCYDF+QATIIHFYA I LA QFE +KDHIAS NALIAGF++NGM+E AR++F+
Sbjct: 336 FDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFD 395
Query: 378 NMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAG-VKPNEITMVSVFCAIASSGTLK 436
+D++SW+AMISGYAQ+ P +AL LF M+ + VKP+ ITMVSVF AI+S G+L+
Sbjct: 396 QTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLE 455
Query: 437 EGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRD-RTTSVSPWNAIIC 495
EG+ AH+Y+ ++I NDNL+AAIIDMYAKCGSI TA +F+ ++ ++++SPWNAIIC
Sbjct: 456 EGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIIC 515
Query: 496 GLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVE 555
G A HG A L L +YSDL+ IK NSITF+GVLS CCHAGLV+LG+ YF+SMKS + +E
Sbjct: 516 GSATHGHAKLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIE 575
Query: 556 PDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKS 615
PD+KHYGCMVDLLG+AG+LE+A+E+I+ MP+KADV+IWG LL+ASR HGNVE+ E AA
Sbjct: 576 PDIKHYGCMVDLLGKAGRLEEAKEMIKKMPVKADVMIWGMLLSASRTHGNVEIAELAATE 635
Query: 616 LAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGVV 665
LA + PSHG +V+LSN+YADAGRWED +R+EMR ++ FSGVV
Sbjct: 636 LAAIDPSHGGCKVMLSNVYADAGRWEDVALVREEMRTRDVEWSRAFSGVV 685
>gi|297812081|ref|XP_002873924.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319761|gb|EFH50183.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 939
Score = 778 bits (2010), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 381/650 (58%), Positives = 505/650 (77%), Gaps = 2/650 (0%)
Query: 18 QNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQA 77
++S+ E ALVSAL C++ V+ G+QIH + KSG +SN FI NS++N+YAKC L+ A
Sbjct: 290 ESSNIERALVSALGSCASSNDVTCGRQIHGRVLKSGHDSNGFICNSVLNMYAKCRLLVDA 349
Query: 78 KSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWR 137
+S+F + + LD + NIM+ GY R+ RL DA ++FD P + CVSYT++I G+AQN+ W
Sbjct: 350 ESVFRAHAKLDSASFNIMVDGYARSRRLGDALKLFDVMPERSCVSYTTLIKGYAQNNQWS 409
Query: 138 EALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLL 197
EA+E+FR+MR LG++ NEVTLA+VIS+ HLGGIW+C+MLH L IKL +D V STNLL
Sbjct: 410 EAMELFREMRNLGIMLNEVTLATVISACSHLGGIWDCKMLHSLAIKLNLDDRVFASTNLL 469
Query: 198 NMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGT 257
MYC+CS L +AR LFDEM ERN+V+WNVMLNG++KAGL+E A+ELF++I KD+VSWGT
Sbjct: 470 LMYCICSCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAKELFDQITEKDIVSWGT 529
Query: 258 MIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAG 317
MIDG L+ +L EAL Y ML G+ P++VM+VDL+SA R++ +GLQ+H IVK G
Sbjct: 530 MIDGCLRKNQLDEALVYYTEMLRRGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKMG 589
Query: 318 FDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFN 377
FDCYDF+QATIIHFYA + LA QFE+ +KDHIAS NALIAGF++NGM+E AR++F+
Sbjct: 590 FDCYDFLQATIIHFYAVSNNLKLALQQFEVSVKDHIASRNALIAGFVKNGMVEQAREVFD 649
Query: 378 NMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAG-VKPNEITMVSVFCAIASSGTLK 436
+ +D++SW+AM+SGYAQ+ P +AL LF M+ + VKP+ ITMVSVF AI+S G+L+
Sbjct: 650 QTRDKDIFSWNAMMSGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLE 709
Query: 437 EGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRD-RTTSVSPWNAIIC 495
EG+ AHEY+ +SI NDNL AAII+MYAKCGSI TA +F+ ++ ++++SPWNAIIC
Sbjct: 710 EGKRAHEYLNRSSIPPNDNLIAAIINMYAKCGSIETALNIFHQTKNIFSSTISPWNAIIC 769
Query: 496 GLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVE 555
G A HG A L L +YSDL+ IK NSITF+GVLS CCHAGLV+LG+ YF+SMKS + +E
Sbjct: 770 GSATHGHAKLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIE 829
Query: 556 PDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKS 615
PD+KHYGCMVDLLG++G+LE+A+E+I++MP+KADV+IWG LL+ASRIHGNVE+ E AA
Sbjct: 830 PDIKHYGCMVDLLGKSGKLEEAKEMIKNMPVKADVMIWGMLLSASRIHGNVEIAELAAAE 889
Query: 616 LAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGVV 665
LA + PSHG +V+LSN+YADAGRWED +R+ MR ++ FSGVV
Sbjct: 890 LAAIDPSHGGCKVMLSNVYADAGRWEDVALVREVMRTRDVEWSRAFSGVV 939
>gi|357132191|ref|XP_003567715.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
mitochondrial-like [Brachypodium distachyon]
Length = 656
Score = 639 bits (1647), Expect = e-180, Method: Compositional matrix adjust.
Identities = 304/632 (48%), Positives = 445/632 (70%), Gaps = 7/632 (1%)
Query: 41 QGQQIHSLIFKSGL-ESNTFIQNSLINLYAKCG---LISQAKSMFDS--CSTLDPVACNI 94
G+Q+H+L KSGL SN F++NSL+ Y++ + A +FD + D A N
Sbjct: 24 HGEQLHALAAKSGLLVSNLFVRNSLLAFYSRLPSSHAPALAHHLFDEIPLALRDAAAHNT 83
Query: 95 MISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPN 154
+++ R L+ A+ + + P + VS+T+++ A+ +A+ VFR M V PN
Sbjct: 84 LLAALARGGHLDHAKRMLAEMPQRDTVSFTTVLTALARAGHAEDAMAVFRGMLAQDVPPN 143
Query: 155 EVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFD 214
EVTLA VI++ M+HG+ ++ +DGFVI++TNL++ Y + + AR++F+
Sbjct: 144 EVTLAGVITALARDWAPAPLGMVHGVSVQRGLDGFVIVATNLVHAYAAAAQVGFARAVFE 203
Query: 215 EMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTM 274
M ++N V+WN MLNG+ KAG +++A E+FERIP +DVVSW MIDGY++ + +SEAL
Sbjct: 204 WMPDKNTVTWNAMLNGYVKAGAIDMAAEMFERIPERDVVSWLVMIDGYIRADCISEALRT 263
Query: 275 YRAMLCD-GIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYA 333
Y AM+ + N ++VD AC R A EG Q+H++I+K GFD + F+QAT+IHFY
Sbjct: 264 YVAMMAEVDTRGNVALLVDFQKACARHAAVLEGQQLHTVILKDGFDTHLFVQATLIHFYG 323
Query: 334 ACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISG 393
+C ++LA++QF+L K HIASWNA +AG +R ++ +ARQLF+NM ++D SWS ++SG
Sbjct: 324 SCDLLDLAKMQFKLSDKSHIASWNAFMAGIVRKNLMHEARQLFDNMPEKDTISWSTLLSG 383
Query: 394 YAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLN 453
Y Q+ +MAL+LF M+ AGVKPN IT+ S A+A+SGTL++GRW H+Y+++ SI L
Sbjct: 384 YVQSGHSDMALQLFCLMLGAGVKPNHITLASTLSAVANSGTLEQGRWIHDYIISKSIHLT 443
Query: 454 DNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDL 513
DNL A +IDMYAKCGS+ A +F H++++ +S+SPWNA+IC LA+HG A+++L+++S L
Sbjct: 444 DNLIAGLIDMYAKCGSVADAVLLFNHVKEKLSSLSPWNAMICSLAIHGHAHMSLELFSQL 503
Query: 514 EKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQ 573
+ NIK NSIT+IGVL+ CCHAG+V G+ +F+SM+ Y + P +KHYGCMVDLLGRAG
Sbjct: 504 QSSNIKPNSITYIGVLNACCHAGMVTEGKHHFESMRREYGIPPTIKHYGCMVDLLGRAGY 563
Query: 574 LEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNI 633
LE+AE +I++MP+K+DVVIWG++LAA+R HGNV +GE+AA+ LA L P+HG S+V L NI
Sbjct: 564 LEEAERLIKTMPVKSDVVIWGSILAAARSHGNVALGEKAAEELAKLDPNHGASKVALCNI 623
Query: 634 YADAGRWEDAFSIRKEMRDCGMKRLPGFSGVV 665
YADAGRW + +RKE+R ++RL G SGVV
Sbjct: 624 YADAGRWNNVSVVRKELRYENLERLSGSSGVV 655
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 108/418 (25%), Positives = 186/418 (44%), Gaps = 70/418 (16%)
Query: 26 LVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCS 85
LV + C+ H AV +GQQ+H++I K G +++ F+Q +LI+ Y C L+ AK F
Sbjct: 280 LVDFQKACARHAAVLEGQQLHTVILKDGFDTHLFVQATLIHFYGSCDLLDLAKMQFKLSD 339
Query: 86 TLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRD 145
+ N ++G +R + +++AR++FD P K +S+++++ G+ Q+ AL++F
Sbjct: 340 KSHIASWNAFMAGIVRKNLMHEARQLFDNMPEKDTISWSTLLSGYVQSGHSDMALQLFCL 399
Query: 146 MRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSS 205
M GV PN +TLAS +S+ + G + + R +H +I I + L++MY C S
Sbjct: 400 MLGAGVKPNHITLASTLSAVANSGTLEQGRWIHDYIISKSIHLTDNLIAGLIDMYAKCGS 459
Query: 206 LVEARSLFDEMKER--NIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYL 263
+ +A LF+ +KE+ ++ WN M+ A G ++ ELF ++ S +
Sbjct: 460 VADAVLLFNHVKEKLSSLSPWNAMICSLAIHGHAHMSLELFSQLQSSN------------ 507
Query: 264 QVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDF 323
I PN + + +++AC A EG
Sbjct: 508 -------------------IKPNSITYIGVLNACCHAGMVTEGKH--------------- 533
Query: 324 IQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ-KR 382
HF + ++ E GI I + ++ R G +E+A +L M K
Sbjct: 534 ------HFES---------MRREYGIPPTIKHYGCMVDLLGRAGYLEEAERLIKTMPVKS 578
Query: 383 DVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRW 440
DV W ++++ A N+AL A + PN C I + GRW
Sbjct: 579 DVVIWGSILA--AARSHGNVALGEKAAEELAKLDPNHGASKVALCNIYADA----GRW 630
>gi|226531155|ref|NP_001148193.1| methyltransferase small domain [Zea mays]
gi|195616632|gb|ACG30146.1| methyltransferase small domain [Zea mays]
Length = 656
Score = 638 bits (1645), Expect = e-180, Method: Compositional matrix adjust.
Identities = 305/632 (48%), Positives = 437/632 (69%), Gaps = 9/632 (1%)
Query: 42 GQQIHSLIFKSGL-ESNTFIQNSLINLYAKC-GLISQAKSMFDSCST--LDPVACNIMIS 97
G+Q+H+L KSGL SN F++NS+++ Y++ ++ A +FD D A N +++
Sbjct: 25 GEQLHALAAKSGLLASNVFVRNSVLSSYSRLPSSLASALQLFDETPPPLRDATARNSILA 84
Query: 98 GYIRNDRLNDAREVFDKTPI--KCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNE 155
R L+ A+ + ++ P + VSYT+++ FA+ A+ VFR M V+PNE
Sbjct: 85 ALTRAGHLDRAQGLLEEMPRIHRDAVSYTTLVTAFARAGHAARAVAVFRSMLSENVVPNE 144
Query: 156 VTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDE 215
TLA I++ G M+HG ++ +DGFVI++TNL++ Y L AR+LFD
Sbjct: 145 ATLAGAITAFARCGAPATVGMIHGFALQRALDGFVIVATNLVHAYAGVLELCSARALFDG 204
Query: 216 MKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMY 275
M RN V+WNVMLNG+ KA ++++A E+F RIP +D VSW T+IDGY+ + +S+A+ Y
Sbjct: 205 MTHRNTVTWNVMLNGYVKAKMIDMAAEVFWRIPERDEVSWLTLIDGYICADLISDAMKAY 264
Query: 276 RAMLCDGIAPND--VMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYA 333
M+ + + ND V++VDL+ AC R A EG Q+H++I+K GFD F+QAT++HFY
Sbjct: 265 VQMVGE-VGANDYEVLLVDLMKACARYSAVTEGQQLHTVILKNGFDALAFVQATLVHFYG 323
Query: 334 ACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISG 393
CG I LA++ F L K H ASWNAL+A +RNG+I +AR+LF++M +RD SWS MISG
Sbjct: 324 CCGLIGLAQMTFRLSDKSHTASWNALLAALLRNGLIREARELFDDMPERDTVSWSTMISG 383
Query: 394 YAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLN 453
Y Q + +MAL+LF+ M++ ++PNE+T+ S AIA SGTL +G+W H+Y++N + L
Sbjct: 384 YVQTGRSDMALKLFYSMLNTSIEPNEVTLASALSAIADSGTLDQGKWIHDYIMNRPVQLT 443
Query: 454 DNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDL 513
DNLS+ +IDMYAKCGSI A + F + D+ +SVSPWNA+IC LA+HG A+++L ++S L
Sbjct: 444 DNLSSGLIDMYAKCGSIADAVQFFNRVNDKFSSVSPWNAMICSLAIHGYAHMSLDLFSQL 503
Query: 514 EKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQ 573
++ +IK NSITFIGVLS CCHAG V G+ YF+SM Y ++P +KHYGCMVDLLGRAG
Sbjct: 504 QRTSIKPNSITFIGVLSACCHAGTVTKGKYYFESMTREYGIQPTIKHYGCMVDLLGRAGY 563
Query: 574 LEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNI 633
LE+AE+++ MPMK DVVIWG++L+ASR GNV +GERAA+ LA L +HG S++ LSNI
Sbjct: 564 LEEAEQLVSMMPMKPDVVIWGSILSASRAQGNVALGERAAEELAKLDQTHGASKIALSNI 623
Query: 634 YADAGRWEDAFSIRKEMRDCGMKRLPGFSGVV 665
YADAG W + +RKE++D ++RL G SG+V
Sbjct: 624 YADAGHWTNVSVVRKELQDANLERLTGRSGIV 655
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 103/388 (26%), Positives = 185/388 (47%), Gaps = 66/388 (17%)
Query: 20 SDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKS 79
+DYE+ LV ++ C+ + AV++GQQ+H++I K+G ++ F+Q +L++ Y CGLI A+
Sbjct: 274 NDYEVLLVDLMKACARYSAVTEGQQLHTVILKNGFDALAFVQATLVHFYGCCGLIGLAQM 333
Query: 80 MFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREA 139
F + N +++ +RN + +ARE+FD P + VS+++MI G+ Q A
Sbjct: 334 TFRLSDKSHTASWNALLAALLRNGLIREARELFDDMPERDTVSWSTMISGYVQTGRSDMA 393
Query: 140 LEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNM 199
L++F M + PNEVTLAS +S+ G + + + +H ++ + +S+ L++M
Sbjct: 394 LKLFYSMLNTSIEPNEVTLASALSAIADSGTLDQGKWIHDYIMNRPVQLTDNLSSGLIDM 453
Query: 200 YCVCSSLVEARSLFDEMKER--NIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGT 257
Y C S+ +A F+ + ++ ++ WN M+ A G ++ +LF
Sbjct: 454 YAKCGSIADAVQFFNRVNDKFSSVSPWNAMICSLAIHGYAHMSLDLFS------------ 501
Query: 258 MIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAG 317
Q++R S I PN + + ++SAC A +G
Sbjct: 502 ------QLQRTS-------------IKPNSITFIGVLSACCHAGTVTKG----------- 531
Query: 318 FDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFN 377
+++ + R E GI+ I + ++ R G +E+A QL +
Sbjct: 532 -----------KYYFESMTR--------EYGIQPTIKHYGCMVDLLGRAGYLEEAEQLVS 572
Query: 378 NMQ-KRDVYSWSAMISGYAQNEQPNMAL 404
M K DV W +++S A Q N+AL
Sbjct: 573 MMPMKPDVVIWGSILS--ASRAQGNVAL 598
>gi|125526069|gb|EAY74183.1| hypothetical protein OsI_02067 [Oryza sativa Indica Group]
Length = 657
Score = 637 bits (1643), Expect = e-180, Method: Compositional matrix adjust.
Identities = 311/646 (48%), Positives = 454/646 (70%), Gaps = 9/646 (1%)
Query: 26 LVSALRYCSAHIAVSQGQQIHSLIFKSGL-ESNTFIQNSLINLYAKCGLISQAKSMFDSC 84
LVS+L+ +A + S G+Q+H+L KSGL SN F++NSL+ Y++ S A +FD
Sbjct: 13 LVSSLKSAAARL--SHGEQLHALAAKSGLLTSNLFVRNSLLAFYSRVA-PSLAYHLFDEI 69
Query: 85 STL--DPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
L D A NI++S R RL A+ + + P + VS+T++I +++ AL V
Sbjct: 70 PPLLRDATAHNILLSALARAGRLERAQCLLAEMPQRDAVSFTTVISALSRSGHPERALAV 129
Query: 143 FRDMRILGVIPNEVTLASVISS-SVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYC 201
FRDM V PNEVTLA V+++ + G HG+ ++ +DGFVI++TNL++ Y
Sbjct: 130 FRDMLTEAVQPNEVTLAEVLTAMACDHGAPAPVGAAHGVAVRRGLDGFVIVATNLVHAYG 189
Query: 202 VCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDG 261
S + ARS+F+ M +RN V+WN MLN + KAG++ +A E+F IP +D VSW TMIDG
Sbjct: 190 AVSQVPSARSIFELMPDRNTVTWNTMLNCYVKAGMINMAAEVFGVIPERDEVSWLTMIDG 249
Query: 262 YLQVERLSEALTMYRAMLCD-GIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDC 320
Y+ + L +AL Y AM+ GI N+V++V L+ AC R A EG Q+H++I+K GFD
Sbjct: 250 YMCADFLLQALRTYVAMVGTVGIRANEVILVGLVKACSRHSAVSEGQQLHTVILKNGFDA 309
Query: 321 YDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ 380
+ F+QAT+IH+Y +C I+ +++QF+L K H+ASWNAL+A +R ++ +ARQLF++M
Sbjct: 310 HAFVQATLIHYYGSCDFIDHSQMQFKLSDKSHVASWNALMASLLRRNLVHEARQLFDDMP 369
Query: 381 KRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRW 440
+RD SWS +ISGY Q+ NMAL++F M+DAGV+PNEIT+ S A+A+SGTL + RW
Sbjct: 370 ERDTISWSTLISGYVQSGNSNMALQIFCSMLDAGVEPNEITLASALSAVANSGTLGQARW 429
Query: 441 AHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMH 500
H+Y+++ SI L D LSA +I++YAKCGSI A ++F H++D++ SVSPWN+IIC LA+H
Sbjct: 430 IHDYIISRSIQLTDKLSAGLINVYAKCGSIAEAVQLFNHVKDKSISVSPWNSIICNLAIH 489
Query: 501 GDANLTLKIYSDLEK-RNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLK 559
G N++L+++S L+ NIK NSIT++GVL+ CCHAG+V G+R F+SM+ Y ++P++K
Sbjct: 490 GYVNMSLELFSQLQSTTNIKPNSITYLGVLNACCHAGMVAEGKRQFESMRQQYGIQPEIK 549
Query: 560 HYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGL 619
HYGCMVDLL RAG LE+AE +I++MPMKADVV WG +LAA+R GNV +GE+AA+ L+ L
Sbjct: 550 HYGCMVDLLCRAGYLEEAELLIKTMPMKADVVAWGCILAAARTQGNVALGEKAAEELSKL 609
Query: 620 QPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGVV 665
PSHG S++ LSN+YADAG W + +RKE+++ ++RL G SG++
Sbjct: 610 DPSHGASKIALSNLYADAGHWSNVSVVRKELQNENLERLTGSSGIL 655
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 105/385 (27%), Positives = 183/385 (47%), Gaps = 65/385 (16%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E+ LV ++ CS H AVS+GQQ+H++I K+G +++ F+Q +LI+ Y C I ++ F
Sbjct: 276 EVILVGLVKACSRHSAVSEGQQLHTVILKNGFDAHAFVQATLIHYYGSCDFIDHSQMQFK 335
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+ N +++ +R + +++AR++FD P + +S++++I G+ Q+ AL++
Sbjct: 336 LSDKSHVASWNALMASLLRRNLVHEARQLFDDMPERDTISWSTLISGYVQSGNSNMALQI 395
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
F M GV PNE+TLAS +S+ + G + + R +H +I I +S L+N+Y
Sbjct: 396 FCSMLDAGVEPNEITLASALSAVANSGTLGQARWIHDYIISRSIQLTDKLSAGLINVYAK 455
Query: 203 CSSLVEARSLFDEMKERNI--VSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMID 260
C S+ EA LF+ +K+++I WN ++ A G V ++ ELF ++ S
Sbjct: 456 CGSIAEAVQLFNHVKDKSISVSPWNSIICNLAIHGYVNMSLELFSQLQST---------- 505
Query: 261 GYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDC 320
I PN + + +++AC A EG K F+
Sbjct: 506 --------------------TNIKPNSITYLGVLNACCHAGMVAEG--------KRQFES 537
Query: 321 YDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ 380
R Q+ GI+ I + ++ R G +E+A L M
Sbjct: 538 M--------------------RQQY--GIQPEIKHYGCMVDLLCRAGYLEEAELLIKTMP 575
Query: 381 -KRDVYSWSAMISGYAQNEQPNMAL 404
K DV +W +++ A Q N+AL
Sbjct: 576 MKADVVAWGCILA--AARTQGNVAL 598
>gi|125570503|gb|EAZ12018.1| hypothetical protein OsJ_01900 [Oryza sativa Japonica Group]
Length = 657
Score = 636 bits (1641), Expect = e-180, Method: Compositional matrix adjust.
Identities = 311/646 (48%), Positives = 454/646 (70%), Gaps = 9/646 (1%)
Query: 26 LVSALRYCSAHIAVSQGQQIHSLIFKSGL-ESNTFIQNSLINLYAKCGLISQAKSMFDSC 84
LVS+L+ +A + S G+Q+H+L KSGL SN F++NSL+ Y++ S A +FD
Sbjct: 13 LVSSLKSAAARL--SHGEQLHALAAKSGLLTSNLFVRNSLLAFYSRVA-PSLAYHLFDEI 69
Query: 85 STL--DPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
L D A NI++S R RL A+ + + P + VS+T++I +++ AL V
Sbjct: 70 PPLLRDATAQNILLSALARAGRLERAQCLLAEMPQRDAVSFTTVISALSRSGHPERALAV 129
Query: 143 FRDMRILGVIPNEVTLASVISS-SVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYC 201
FRDM V PNEVTLA V+++ + G HG+ ++ +DGFVI++TNL++ Y
Sbjct: 130 FRDMLTEAVQPNEVTLAEVLTAMACDHGAPAPVGAAHGVAVRRGLDGFVIVATNLVHAYG 189
Query: 202 VCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDG 261
S + ARS+F+ M +RN V+WN MLN + KAG++ +A E+F IP +D VSW TMIDG
Sbjct: 190 AVSQVPSARSIFELMPDRNTVTWNTMLNCYVKAGMINMAAEVFGVIPERDEVSWLTMIDG 249
Query: 262 YLQVERLSEALTMYRAMLCD-GIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDC 320
Y+ + L +AL Y AM+ GI N+V++V L+ AC R A EG Q+H++I+K GFD
Sbjct: 250 YMCADFLLQALRTYVAMVGTVGIRANEVILVGLVKACSRHSAVSEGQQLHTVILKNGFDA 309
Query: 321 YDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ 380
+ F+QAT+IH+Y +C I+ A++QF+L K H+ASWNAL+A +R ++ +ARQLF++M
Sbjct: 310 HAFVQATLIHYYGSCDFIDHAQMQFKLSDKSHVASWNALMASLLRRNLVHEARQLFDDMP 369
Query: 381 KRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRW 440
+RD SWS +ISGY Q+ NMAL++F M+DAGV+PNEIT+ S A+A+SGTL + RW
Sbjct: 370 ERDTISWSTLISGYVQSGNSNMALQIFCSMLDAGVEPNEITLASALSAVANSGTLGQARW 429
Query: 441 AHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMH 500
H+Y+++ SI L D LSA +I++YAKCGSI A ++F H++D++ SVSPWN+IIC LA+H
Sbjct: 430 IHDYIISRSIQLTDKLSAGLINVYAKCGSIAEAVQLFNHVKDKSISVSPWNSIICNLAIH 489
Query: 501 GDANLTLKIYSDLEK-RNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLK 559
G N++L+++S L+ +IK NSIT++GVL+ CCHAG+V G+R F+SM+ Y ++P++K
Sbjct: 490 GYVNMSLELFSQLQSTTHIKPNSITYLGVLNACCHAGMVAEGKRQFESMRQQYGIQPEIK 549
Query: 560 HYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGL 619
HYGCMVDLL RAG LE+AE +I++MPMKADVV WG +LAA+R GNV +GE+AA+ L+ L
Sbjct: 550 HYGCMVDLLCRAGYLEEAELLIKTMPMKADVVAWGCILAAARTQGNVALGEKAAEELSKL 609
Query: 620 QPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGVV 665
PSHG S++ LSN+YADAG W + +RKE+++ ++RL G SG++
Sbjct: 610 DPSHGASKIALSNLYADAGHWSNVSVVRKELQNENLERLTGSSGIL 655
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 106/385 (27%), Positives = 183/385 (47%), Gaps = 65/385 (16%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E+ LV ++ CS H AVS+GQQ+H++I K+G +++ F+Q +LI+ Y C I A+ F
Sbjct: 276 EVILVGLVKACSRHSAVSEGQQLHTVILKNGFDAHAFVQATLIHYYGSCDFIDHAQMQFK 335
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+ N +++ +R + +++AR++FD P + +S++++I G+ Q+ AL++
Sbjct: 336 LSDKSHVASWNALMASLLRRNLVHEARQLFDDMPERDTISWSTLISGYVQSGNSNMALQI 395
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
F M GV PNE+TLAS +S+ + G + + R +H +I I +S L+N+Y
Sbjct: 396 FCSMLDAGVEPNEITLASALSAVANSGTLGQARWIHDYIISRSIQLTDKLSAGLINVYAK 455
Query: 203 CSSLVEARSLFDEMKERNI--VSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMID 260
C S+ EA LF+ +K+++I WN ++ A G V ++ ELF ++ S
Sbjct: 456 CGSIAEAVQLFNHVKDKSISVSPWNSIICNLAIHGYVNMSLELFSQLQST---------- 505
Query: 261 GYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDC 320
I PN + + +++AC A EG K F+
Sbjct: 506 --------------------THIKPNSITYLGVLNACCHAGMVAEG--------KRQFES 537
Query: 321 YDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ 380
R Q+ GI+ I + ++ R G +E+A L M
Sbjct: 538 M--------------------RQQY--GIQPEIKHYGCMVDLLCRAGYLEEAELLIKTMP 575
Query: 381 -KRDVYSWSAMISGYAQNEQPNMAL 404
K DV +W +++ A Q N+AL
Sbjct: 576 MKADVVAWGCILA--AARTQGNVAL 598
>gi|115436706|ref|NP_001043111.1| Os01g0390600 [Oryza sativa Japonica Group]
gi|21328171|dbj|BAC00748.1| pentatricopeptide (PPR) repeat-containing-like protein [Oryza
sativa Japonica Group]
gi|113532642|dbj|BAF05025.1| Os01g0390600 [Oryza sativa Japonica Group]
Length = 657
Score = 636 bits (1641), Expect = e-179, Method: Compositional matrix adjust.
Identities = 311/646 (48%), Positives = 454/646 (70%), Gaps = 9/646 (1%)
Query: 26 LVSALRYCSAHIAVSQGQQIHSLIFKSGL-ESNTFIQNSLINLYAKCGLISQAKSMFDSC 84
LVS+L+ +A + S G+Q+H+L KSGL SN F++NSL+ Y++ S A +FD
Sbjct: 13 LVSSLKSAAARL--SHGEQLHALAAKSGLLTSNLFVRNSLLAFYSRVA-PSLAYHLFDEI 69
Query: 85 STL--DPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
L D A NI++S R RL A+ + + P + VS+T++I +++ AL V
Sbjct: 70 PPLLRDATAHNILLSALARAGRLERAQCLLAEMPQRDAVSFTTVISALSRSGHPERALAV 129
Query: 143 FRDMRILGVIPNEVTLASVISS-SVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYC 201
FRDM V PNEVTLA V+++ + G HG+ ++ +DGFVI++TNL++ Y
Sbjct: 130 FRDMLTEAVQPNEVTLAEVLTAMACDHGAPAPVGAAHGVAVRRGLDGFVIVATNLVHAYG 189
Query: 202 VCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDG 261
S + ARS+F+ M +RN V+WN MLN + KAG++ +A E+F IP +D VSW TMIDG
Sbjct: 190 AVSQVPSARSIFELMPDRNTVTWNTMLNCYVKAGMINMAAEVFGVIPERDEVSWLTMIDG 249
Query: 262 YLQVERLSEALTMYRAMLCD-GIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDC 320
Y+ + L +AL Y AM+ GI N+V++V L+ AC R A EG Q+H++I+K GFD
Sbjct: 250 YMCADFLLQALRTYVAMVGTVGIRANEVILVGLVKACSRHSAVSEGQQLHTVILKNGFDA 309
Query: 321 YDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ 380
+ F+QAT+IH+Y +C I+ A++QF+L K H+ASWNAL+A +R ++ +ARQLF++M
Sbjct: 310 HAFVQATLIHYYGSCDFIDHAQMQFKLSDKSHVASWNALMASLLRRNLVHEARQLFDDMP 369
Query: 381 KRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRW 440
+RD SWS +ISGY Q+ NMAL++F M+DAGV+PNEIT+ S A+A+SGTL + RW
Sbjct: 370 ERDTISWSTLISGYVQSGNSNMALQIFCSMLDAGVEPNEITLASALSAVANSGTLGQARW 429
Query: 441 AHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMH 500
H+Y+++ SI L D LSA +I++YAKCGSI A ++F H++D++ SVSPWN+IIC LA+H
Sbjct: 430 IHDYIISRSIQLTDKLSAGLINVYAKCGSIAEAVQLFNHVKDKSISVSPWNSIICNLAIH 489
Query: 501 GDANLTLKIYSDLEK-RNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLK 559
G N++L+++S L+ +IK NSIT++GVL+ CCHAG+V G+R F+SM+ Y ++P++K
Sbjct: 490 GYVNMSLELFSQLQSTTHIKPNSITYLGVLNACCHAGMVAEGKRQFESMRQQYGIQPEIK 549
Query: 560 HYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGL 619
HYGCMVDLL RAG LE+AE +I++MPMKADVV WG +LAA+R GNV +GE+AA+ L+ L
Sbjct: 550 HYGCMVDLLCRAGYLEEAELLIKTMPMKADVVAWGCILAAARTQGNVALGEKAAEELSKL 609
Query: 620 QPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGVV 665
PSHG S++ LSN+YADAG W + +RKE+++ ++RL G SG++
Sbjct: 610 DPSHGASKIALSNLYADAGHWSNVSVVRKELQNENLERLTGSSGIL 655
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 106/385 (27%), Positives = 183/385 (47%), Gaps = 65/385 (16%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E+ LV ++ CS H AVS+GQQ+H++I K+G +++ F+Q +LI+ Y C I A+ F
Sbjct: 276 EVILVGLVKACSRHSAVSEGQQLHTVILKNGFDAHAFVQATLIHYYGSCDFIDHAQMQFK 335
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+ N +++ +R + +++AR++FD P + +S++++I G+ Q+ AL++
Sbjct: 336 LSDKSHVASWNALMASLLRRNLVHEARQLFDDMPERDTISWSTLISGYVQSGNSNMALQI 395
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
F M GV PNE+TLAS +S+ + G + + R +H +I I +S L+N+Y
Sbjct: 396 FCSMLDAGVEPNEITLASALSAVANSGTLGQARWIHDYIISRSIQLTDKLSAGLINVYAK 455
Query: 203 CSSLVEARSLFDEMKERNI--VSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMID 260
C S+ EA LF+ +K+++I WN ++ A G V ++ ELF ++ S
Sbjct: 456 CGSIAEAVQLFNHVKDKSISVSPWNSIICNLAIHGYVNMSLELFSQLQST---------- 505
Query: 261 GYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDC 320
I PN + + +++AC A EG K F+
Sbjct: 506 --------------------THIKPNSITYLGVLNACCHAGMVAEG--------KRQFES 537
Query: 321 YDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ 380
R Q+ GI+ I + ++ R G +E+A L M
Sbjct: 538 M--------------------RQQY--GIQPEIKHYGCMVDLLCRAGYLEEAELLIKTMP 575
Query: 381 -KRDVYSWSAMISGYAQNEQPNMAL 404
K DV +W +++ A Q N+AL
Sbjct: 576 MKADVVAWGCILA--AARTQGNVAL 598
>gi|414886077|tpg|DAA62091.1| TPA: methyltransferase small domain protein [Zea mays]
Length = 656
Score = 636 bits (1640), Expect = e-179, Method: Compositional matrix adjust.
Identities = 305/632 (48%), Positives = 438/632 (69%), Gaps = 9/632 (1%)
Query: 42 GQQIHSLIFKSGL-ESNTFIQNSLINLYAKC-GLISQAKSMFDSCST--LDPVACNIMIS 97
G+Q+H+L KSGL SN F++NS+++ Y++ ++ A +FD D A N +++
Sbjct: 25 GEQLHALAAKSGLLASNVFVRNSVLSSYSRLPSSLASALQLFDETPPPLRDATARNSVLA 84
Query: 98 GYIRNDRLNDAREVFDKTPI--KCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNE 155
R L+ A+ + ++ P + VSYT+++ FA+ A+ VFR M V+PNE
Sbjct: 85 ALTRAGYLDRAQGLLEEMPRIHRDAVSYTTLVTSFARAGHAARAVAVFRSMLSENVVPNE 144
Query: 156 VTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDE 215
TLA I++ G M+HG ++ +DGFVI++TNL++ Y L AR+LFD
Sbjct: 145 ATLAGAITAFARCGAPATVGMIHGFALQRALDGFVIVATNLVHAYAGVLELCSARALFDG 204
Query: 216 MKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMY 275
M RN V+WNVMLNG+ KA ++++A E+F RIP +D VSW T+IDGY+ + +S+A+ Y
Sbjct: 205 MTYRNTVTWNVMLNGYVKAKMIDMAAEVFWRIPERDEVSWLTLIDGYICADLISDAMKAY 264
Query: 276 RAMLCDGIAPND--VMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYA 333
M+ + + ND V++VDL+ AC R A EG Q+H++I+K GFD + F+QAT++HFY
Sbjct: 265 VQMVGE-VGANDYEVLLVDLMKACARYSAVTEGQQLHTVILKNGFDAHAFVQATLVHFYG 323
Query: 334 ACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISG 393
CG I LA++ F L K H ASWNAL+A +RNG+I +AR+LF++M +RD SWS MISG
Sbjct: 324 CCGLIGLAQMTFRLSDKSHTASWNALLAALLRNGLIREARELFDDMPERDTVSWSTMISG 383
Query: 394 YAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLN 453
Y Q + +MAL+LF+ M++ ++PNE+T+ S AIA SGTL +G+W H+Y++N + L
Sbjct: 384 YVQTGRSDMALKLFYSMLNTSIEPNEVTLASALSAIADSGTLDQGKWIHDYIMNRPVQLT 443
Query: 454 DNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDL 513
DNLS+ +IDMYAKCGSI A + F + D+ +SVSPWNA+IC LA+HG A+++L ++S L
Sbjct: 444 DNLSSGLIDMYAKCGSIADAVQFFNRVNDKFSSVSPWNAMICSLAIHGYAHMSLDLFSQL 503
Query: 514 EKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQ 573
++ +IK NSITFIGVLS CCHAG V G+ YF+SM Y ++P +KHYGCMVDLLGRAG
Sbjct: 504 QRTSIKPNSITFIGVLSACCHAGTVTKGKYYFESMTREYGIQPTIKHYGCMVDLLGRAGY 563
Query: 574 LEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNI 633
LE+AE+++ MPMK DVVIWG++L+ASR GNV +GERAA+ LA L +HG S++ LSNI
Sbjct: 564 LEEAEQLVSMMPMKPDVVIWGSILSASRAQGNVALGERAAEELAKLDQTHGASKIALSNI 623
Query: 634 YADAGRWEDAFSIRKEMRDCGMKRLPGFSGVV 665
YADAG W + +RKE++D ++RL G SG+V
Sbjct: 624 YADAGHWINVSVVRKELQDANLERLTGRSGIV 655
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 103/388 (26%), Positives = 186/388 (47%), Gaps = 66/388 (17%)
Query: 20 SDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKS 79
+DYE+ LV ++ C+ + AV++GQQ+H++I K+G +++ F+Q +L++ Y CGLI A+
Sbjct: 274 NDYEVLLVDLMKACARYSAVTEGQQLHTVILKNGFDAHAFVQATLVHFYGCCGLIGLAQM 333
Query: 80 MFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREA 139
F + N +++ +RN + +ARE+FD P + VS+++MI G+ Q A
Sbjct: 334 TFRLSDKSHTASWNALLAALLRNGLIREARELFDDMPERDTVSWSTMISGYVQTGRSDMA 393
Query: 140 LEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNM 199
L++F M + PNEVTLAS +S+ G + + + +H ++ + +S+ L++M
Sbjct: 394 LKLFYSMLNTSIEPNEVTLASALSAIADSGTLDQGKWIHDYIMNRPVQLTDNLSSGLIDM 453
Query: 200 YCVCSSLVEARSLFDEMKER--NIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGT 257
Y C S+ +A F+ + ++ ++ WN M+ A G ++ +LF
Sbjct: 454 YAKCGSIADAVQFFNRVNDKFSSVSPWNAMICSLAIHGYAHMSLDLFS------------ 501
Query: 258 MIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAG 317
Q++R S I PN + + ++SAC A +G
Sbjct: 502 ------QLQRTS-------------IKPNSITFIGVLSACCHAGTVTKGK---------- 532
Query: 318 FDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFN 377
+++ + R E GI+ I + ++ R G +E+A QL +
Sbjct: 533 ------------YYFESMTR--------EYGIQPTIKHYGCMVDLLGRAGYLEEAEQLVS 572
Query: 378 NMQ-KRDVYSWSAMISGYAQNEQPNMAL 404
M K DV W +++S A Q N+AL
Sbjct: 573 MMPMKPDVVIWGSILS--ASRAQGNVAL 598
>gi|414886078|tpg|DAA62092.1| TPA: hypothetical protein ZEAMMB73_488923 [Zea mays]
Length = 714
Score = 634 bits (1636), Expect = e-179, Method: Compositional matrix adjust.
Identities = 305/632 (48%), Positives = 438/632 (69%), Gaps = 9/632 (1%)
Query: 42 GQQIHSLIFKSGL-ESNTFIQNSLINLYAKC-GLISQAKSMFDSCST--LDPVACNIMIS 97
G+Q+H+L KSGL SN F++NS+++ Y++ ++ A +FD D A N +++
Sbjct: 25 GEQLHALAAKSGLLASNVFVRNSVLSSYSRLPSSLASALQLFDETPPPLRDATARNSVLA 84
Query: 98 GYIRNDRLNDAREVFDKTPI--KCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNE 155
R L+ A+ + ++ P + VSYT+++ FA+ A+ VFR M V+PNE
Sbjct: 85 ALTRAGYLDRAQGLLEEMPRIHRDAVSYTTLVTSFARAGHAARAVAVFRSMLSENVVPNE 144
Query: 156 VTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDE 215
TLA I++ G M+HG ++ +DGFVI++TNL++ Y L AR+LFD
Sbjct: 145 ATLAGAITAFARCGAPATVGMIHGFALQRALDGFVIVATNLVHAYAGVLELCSARALFDG 204
Query: 216 MKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMY 275
M RN V+WNVMLNG+ KA ++++A E+F RIP +D VSW T+IDGY+ + +S+A+ Y
Sbjct: 205 MTYRNTVTWNVMLNGYVKAKMIDMAAEVFWRIPERDEVSWLTLIDGYICADLISDAMKAY 264
Query: 276 RAMLCDGIAPND--VMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYA 333
M+ + + ND V++VDL+ AC R A EG Q+H++I+K GFD + F+QAT++HFY
Sbjct: 265 VQMVGE-VGANDYEVLLVDLMKACARYSAVTEGQQLHTVILKNGFDAHAFVQATLVHFYG 323
Query: 334 ACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISG 393
CG I LA++ F L K H ASWNAL+A +RNG+I +AR+LF++M +RD SWS MISG
Sbjct: 324 CCGLIGLAQMTFRLSDKSHTASWNALLAALLRNGLIREARELFDDMPERDTVSWSTMISG 383
Query: 394 YAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLN 453
Y Q + +MAL+LF+ M++ ++PNE+T+ S AIA SGTL +G+W H+Y++N + L
Sbjct: 384 YVQTGRSDMALKLFYSMLNTSIEPNEVTLASALSAIADSGTLDQGKWIHDYIMNRPVQLT 443
Query: 454 DNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDL 513
DNLS+ +IDMYAKCGSI A + F + D+ +SVSPWNA+IC LA+HG A+++L ++S L
Sbjct: 444 DNLSSGLIDMYAKCGSIADAVQFFNRVNDKFSSVSPWNAMICSLAIHGYAHMSLDLFSQL 503
Query: 514 EKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQ 573
++ +IK NSITFIGVLS CCHAG V G+ YF+SM Y ++P +KHYGCMVDLLGRAG
Sbjct: 504 QRTSIKPNSITFIGVLSACCHAGTVTKGKYYFESMTREYGIQPTIKHYGCMVDLLGRAGY 563
Query: 574 LEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNI 633
LE+AE+++ MPMK DVVIWG++L+ASR GNV +GERAA+ LA L +HG S++ LSNI
Sbjct: 564 LEEAEQLVSMMPMKPDVVIWGSILSASRAQGNVALGERAAEELAKLDQTHGASKIALSNI 623
Query: 634 YADAGRWEDAFSIRKEMRDCGMKRLPGFSGVV 665
YADAG W + +RKE++D ++RL G SG+V
Sbjct: 624 YADAGHWINVSVVRKELQDANLERLTGRSGIV 655
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 103/388 (26%), Positives = 186/388 (47%), Gaps = 66/388 (17%)
Query: 20 SDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKS 79
+DYE+ LV ++ C+ + AV++GQQ+H++I K+G +++ F+Q +L++ Y CGLI A+
Sbjct: 274 NDYEVLLVDLMKACARYSAVTEGQQLHTVILKNGFDAHAFVQATLVHFYGCCGLIGLAQM 333
Query: 80 MFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREA 139
F + N +++ +RN + +ARE+FD P + VS+++MI G+ Q A
Sbjct: 334 TFRLSDKSHTASWNALLAALLRNGLIREARELFDDMPERDTVSWSTMISGYVQTGRSDMA 393
Query: 140 LEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNM 199
L++F M + PNEVTLAS +S+ G + + + +H ++ + +S+ L++M
Sbjct: 394 LKLFYSMLNTSIEPNEVTLASALSAIADSGTLDQGKWIHDYIMNRPVQLTDNLSSGLIDM 453
Query: 200 YCVCSSLVEARSLFDEMKER--NIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGT 257
Y C S+ +A F+ + ++ ++ WN M+ A G ++ +LF
Sbjct: 454 YAKCGSIADAVQFFNRVNDKFSSVSPWNAMICSLAIHGYAHMSLDLFS------------ 501
Query: 258 MIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAG 317
Q++R S I PN + + ++SAC A +G
Sbjct: 502 ------QLQRTS-------------IKPNSITFIGVLSACCHAGTVTKG----------- 531
Query: 318 FDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFN 377
+++ + R E GI+ I + ++ R G +E+A QL +
Sbjct: 532 -----------KYYFESMTR--------EYGIQPTIKHYGCMVDLLGRAGYLEEAEQLVS 572
Query: 378 NMQ-KRDVYSWSAMISGYAQNEQPNMAL 404
M K DV W +++S A Q N+AL
Sbjct: 573 MMPMKPDVVIWGSILS--ASRAQGNVAL 598
>gi|326504712|dbj|BAK06647.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 658
Score = 634 bits (1636), Expect = e-179, Method: Compositional matrix adjust.
Identities = 304/649 (46%), Positives = 453/649 (69%), Gaps = 12/649 (1%)
Query: 26 LVSALRYCSAHIAVSQGQQIHSLIFKSGL-ESNTFIQNSLINLYAKCG---LISQAKSMF 81
LVS+L+ + + G+Q+H+L KSGL SNTF++NSL+ YA+ + A+ +F
Sbjct: 12 LVSSLKSGAR---LRHGEQLHALAAKSGLLASNTFVRNSLLAFYARLPSPQAPALARHLF 68
Query: 82 D--SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREA 139
D + DP A N +++ R RL+ A+ + + P + VSYT+++ A+ +A
Sbjct: 69 DEIPLALRDPAAHNTLLASLARAGRLDLAQGMLAEMPQRDTVSYTTVLTALARAGHAEDA 128
Query: 140 LEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNM 199
+ VFR M V PNEVTLA V+++ + HG+ ++ ++GF+I++TNL++
Sbjct: 129 VAVFRGMLAQDVPPNEVTLAGVLTALALERPPVPVGVAHGVTVRRGLNGFLIVATNLVHA 188
Query: 200 YCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMI 259
Y S + AR +F++M ++N V+WN MLNG+ KAG++ +A E+F RIP +D VSW T+I
Sbjct: 189 YAAASQVCFAREIFEQMPDKNTVTWNAMLNGYLKAGMLPMAAEVFGRIPERDAVSWLTII 248
Query: 260 DGYLQVERLSEALTMYRAMLCD-GIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGF 318
DGY++ + SEAL Y AM+ + N ++VDLI C R A EG Q+H++I+K GF
Sbjct: 249 DGYIRADCTSEALRAYVAMMAEVDTRGNAALLVDLIKVCARHAAVLEGQQLHTVILKDGF 308
Query: 319 DCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNN 378
D + F+QAT+IHFY +C +++AR+QF+L K HIASWNAL++G + ++ +ARQLF++
Sbjct: 309 DAHPFVQATLIHFYGSCDLLDIARMQFKLSDKSHIASWNALMSGLLHRNLMHEARQLFDD 368
Query: 379 MQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG 438
M +RD SWS ++SGY Q+ N AL+LF+ M+ AGV+PN++T+ S A+A SG L++G
Sbjct: 369 MPERDTISWSTLLSGYVQSGHSNKALQLFYLMLGAGVEPNDVTLASTLSAVADSGMLEQG 428
Query: 439 RWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLA 498
R+ H+Y+++NSI L DNLSA +IDMYAKCGS+ A ++F H++ + +SVSPWNAIIC LA
Sbjct: 429 RFIHDYIISNSIQLTDNLSAGLIDMYAKCGSVADAIQLFSHVKHKLSSVSPWNAIICSLA 488
Query: 499 MHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDL 558
+HG A+ +L+++ +L++ NIK NS+T+IGVL+ CCHAGLV G +F+SM Y ++P +
Sbjct: 489 IHGHAHTSLELFLELQRTNIKPNSVTYIGVLNACCHAGLVTEGRHHFESMSREYGIQPTI 548
Query: 559 KHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAG 618
KHYGCMVDLLGRAG LE+AE +I+ MPM++DVVIWG++LAA+R HGNV +GE+AA+ LA
Sbjct: 549 KHYGCMVDLLGRAGHLEEAENLIQMMPMRSDVVIWGSILAAARTHGNVALGEKAAEELAK 608
Query: 619 LQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMR--DCGMKRLPGFSGVV 665
+ P+HG S+V LSNI+A+A RW + +RKE++ D M R G SGVV
Sbjct: 609 IDPNHGASKVALSNIFAEAARWNNVSLVRKELQDEDENMGRFSGSSGVV 657
Score = 46.6 bits (109), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 52/250 (20%), Positives = 92/250 (36%), Gaps = 84/250 (33%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCG-------LIS 75
++ L S L + + QG+ IH I + ++ + LI++YAKCG L S
Sbjct: 409 DVTLASTLSAVADSGMLEQGRFIHDYIISNSIQLTDNLSAGLIDMYAKCGSVADAIQLFS 468
Query: 76 QAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDC 135
K S S + + C++ I G+ ++TS
Sbjct: 469 HVKHKLSSVSPWNAIICSLAIHGH----------------------AHTS---------- 496
Query: 136 WREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTN 195
LE+F +++ + PN VT V+++ H G +
Sbjct: 497 ----LELFLELQRTNIKPNSVTYIGVLNACCHAGLV------------------------ 528
Query: 196 LLNMYCVCSSLVEARSLFDEMK-----ERNIVSWNVMLNGFAKAGLVELARELFERIPSK 250
E R F+ M + I + M++ +AG +E A L + +P +
Sbjct: 529 -----------TEGRHHFESMSREYGIQPTIKHYGCMVDLLGRAGHLEEAENLIQMMPMR 577
Query: 251 -DVVSWGTMI 259
DVV WG+++
Sbjct: 578 SDVVIWGSIL 587
>gi|242049708|ref|XP_002462598.1| hypothetical protein SORBIDRAFT_02g028755 [Sorghum bicolor]
gi|241925975|gb|EER99119.1| hypothetical protein SORBIDRAFT_02g028755 [Sorghum bicolor]
Length = 655
Score = 624 bits (1608), Expect = e-176, Method: Compositional matrix adjust.
Identities = 300/631 (47%), Positives = 434/631 (68%), Gaps = 7/631 (1%)
Query: 42 GQQIHSLIFKSGLES-NTFIQNSLINLYAKC-GLISQAKSMFDSCST--LDPVACNIMIS 97
G+Q+H+L KSGL + N F++NS+++ Y++ ++ A +FD D A N +++
Sbjct: 25 GEQLHALAAKSGLLACNAFVRNSVLSFYSRLPSSLASALQLFDETPAPLRDTAARNSVLA 84
Query: 98 GYIRNDRLNDAREVFDKTPI--KCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNE 155
R L+ A+ + D+ P + VSYT+++ A+ A+ VFR M V+PNE
Sbjct: 85 ALTRAGHLDRAQRLLDEMPRVHRDAVSYTTLVTALARAGHAGRAVAVFRGMLSENVVPNE 144
Query: 156 VTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDE 215
VTLA I + G M+HG +K +DGFVI++TNL++ Y L AR++FD
Sbjct: 145 VTLAGAIMAFARCGAPATVGMIHGFALKRALDGFVIVATNLVHAYAGVLELYSARAMFDG 204
Query: 216 MKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMY 275
M RN V+WN MLNG+ KA ++++A E+F RIP +D VSW T+IDGY+ + +S+A+ Y
Sbjct: 205 MTHRNAVTWNAMLNGYVKAEMIDMAAEVFWRIPERDEVSWLTLIDGYICADLISDAMKAY 264
Query: 276 RAMLCD-GIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAA 334
M+ + G ++V++VDL+ AC R A EG Q+H++I+K GFD + F+QAT++HFY
Sbjct: 265 VQMVGEVGANDHEVLLVDLMKACARYSAITEGQQLHTVILKNGFDAHAFVQATLVHFYGC 324
Query: 335 CGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGY 394
CG I LA++ F+L K H ASWNAL+A +R G+I +AR+LF++M +RD SWS MISGY
Sbjct: 325 CGLIGLAQMAFKLSDKSHTASWNALLAALLRKGLIHEARELFDDMPERDTVSWSTMISGY 384
Query: 395 AQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLND 454
Q + +MALELF+ M++ V+PNE+T+ S AIA SGTL +G+W H++++N I L D
Sbjct: 385 VQTGRSDMALELFYSMLNTSVEPNEVTLASALSAIADSGTLDQGKWIHDHIMNRPIQLTD 444
Query: 455 NLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLE 514
NLSA +IDMYAK GS+ A + F D+ +SVSPWNA+IC LA+HG A+++L ++S L+
Sbjct: 445 NLSAGLIDMYAKRGSVADAVQFFNCASDKFSSVSPWNAMICSLAIHGYAHMSLDLFSQLQ 504
Query: 515 KRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQL 574
+ +IK NSITFIGVLS CCH G+V G+ YF++M Y ++P +KHYGCMVDLLGRAG L
Sbjct: 505 RTSIKPNSITFIGVLSACCHTGMVAKGKYYFEAMTREYGIQPTIKHYGCMVDLLGRAGYL 564
Query: 575 EDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIY 634
E+AE+++ MPMKADVVIWG++L+A+R GN+ +GE+AA+ LA L +HG S+V LSNIY
Sbjct: 565 EEAEQLVSMMPMKADVVIWGSILSAARAQGNIALGEKAAEELAKLDQTHGASKVALSNIY 624
Query: 635 ADAGRWEDAFSIRKEMRDCGMKRLPGFSGVV 665
ADAG W + +RKE++D +RL G SG+V
Sbjct: 625 ADAGHWTNVSVVRKELQDENFERLVGRSGIV 655
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 103/388 (26%), Positives = 184/388 (47%), Gaps = 66/388 (17%)
Query: 20 SDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKS 79
+D+E+ LV ++ C+ + A+++GQQ+H++I K+G +++ F+Q +L++ Y CGLI A+
Sbjct: 274 NDHEVLLVDLMKACARYSAITEGQQLHTVILKNGFDAHAFVQATLVHFYGCCGLIGLAQM 333
Query: 80 MFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREA 139
F + N +++ +R +++ARE+FD P + VS+++MI G+ Q A
Sbjct: 334 AFKLSDKSHTASWNALLAALLRKGLIHEARELFDDMPERDTVSWSTMISGYVQTGRSDMA 393
Query: 140 LEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNM 199
LE+F M V PNEVTLAS +S+ G + + + +H ++ I +S L++M
Sbjct: 394 LELFYSMLNTSVEPNEVTLASALSAIADSGTLDQGKWIHDHIMNRPIQLTDNLSAGLIDM 453
Query: 200 YCVCSSLVEARSLFDEMKER--NIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGT 257
Y S+ +A F+ ++ ++ WN M+ A G ++ +LF
Sbjct: 454 YAKRGSVADAVQFFNCASDKFSSVSPWNAMICSLAIHGYAHMSLDLFS------------ 501
Query: 258 MIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAG 317
Q++R S I PN + + ++SAC
Sbjct: 502 ------QLQRTS-------------IKPNSITFIGVLSAC-------------------- 522
Query: 318 FDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFN 377
C+ + A +++ A R E GI+ I + ++ R G +E+A QL +
Sbjct: 523 --CHTGMVAKGKYYFEAMTR--------EYGIQPTIKHYGCMVDLLGRAGYLEEAEQLVS 572
Query: 378 NMQ-KRDVYSWSAMISGYAQNEQPNMAL 404
M K DV W +++S A Q N+AL
Sbjct: 573 MMPMKADVVIWGSILS--AARAQGNIAL 598
>gi|224092370|ref|XP_002309579.1| predicted protein [Populus trichocarpa]
gi|222855555|gb|EEE93102.1| predicted protein [Populus trichocarpa]
Length = 854
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 215/636 (33%), Positives = 362/636 (56%), Gaps = 39/636 (6%)
Query: 33 CSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVAC 92
C + V G ++H I K G N + N+L+ LY+KCG
Sbjct: 143 CCKNFDVKLGSEVHGRILKCGFGRNKSLNNNLMGLYSKCG-------------------- 182
Query: 93 NIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVI 152
+L + ++F+K + +S+ +MI + +REAL++F +M + GV+
Sbjct: 183 -----------KLKEVCQLFEKMTHRDVISWNTMISCYVLKGMYREALDLFDEMLVSGVL 231
Query: 153 PNEVTLASVISSSVHLGGIWECRMLHGLVI--KLMIDGFVIISTNLLNMYCVCSSLVEAR 210
P+E+T+ S++S+ L + + LH ++ KL I G ++ L++MY C + EA
Sbjct: 232 PDEITMVSLVSTCAKLKDLEMGKRLHLYIVDNKLWIRGSLL--NCLVDMYSKCGKMDEAH 289
Query: 211 SLFDEMKER--NIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERL 268
L E ++V W +++G+ K+ ++ AR+LF+++ + +VSW TM+ GY+Q
Sbjct: 290 GLLSRCDESEVDVVLWTTLVSGYVKSNKIDKARQLFDKMNERSLVSWTTMMSGYVQGGYY 349
Query: 269 SEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATI 328
E+L +++ M + + P++V +V ++SAC F G +H+ IV G F+ +
Sbjct: 350 CESLELFQQMRFENVIPDEVALVTVLSACVHLEDFDLGRSVHAFIVTYGMLVDGFLGNAL 409
Query: 329 IHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWS 388
+ YA CG+++ A FE ASWN+++ GF R+G ++ AR FN + ++D+ SW+
Sbjct: 410 LDLYAKCGKLDEALRTFEQLPCKSAASWNSMLDGFCRSGGVDKARDFFNKIPEKDIVSWN 469
Query: 389 AMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNN 448
M++ Y +++ N + E+F M + VKP++ T++S+ + A G L G W + Y+ N
Sbjct: 470 TMVNAYVKHDLFNESFEIFCKMQSSNVKPDKTTLISLLSSCAKVGALNHGIWVNVYIEKN 529
Query: 449 SITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLK 508
I ++ L A+IDMY KCG + A+E+F I ++ V W A++ AM G A +
Sbjct: 530 EIGIDAMLGTALIDMYGKCGCVEMAYEIFTQIIEKNVFV--WTAMMAAYAMEGQALEAID 587
Query: 509 IYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLL 568
+Y ++E+R +K + +TFI +L+ C H GLVD G +YF ++S YN+ P + HYGCMVDLL
Sbjct: 588 LYLEMEERGVKPDHVTFIALLAACSHGGLVDEGYKYFNKLRSFYNIIPTIHHYGCMVDLL 647
Query: 569 GRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRV 628
GR G LE+ + I MP++ DV IW +L+ A R H NVE+ E+A K L + P++ + V
Sbjct: 648 GRVGHLEETVKFIERMPIEPDVSIWSSLMRACRSHHNVELAEQAFKQLIEIDPTNNGAHV 707
Query: 629 LLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
LLSNIYADAGRW+D +R ++ + G+ + PGF+ +
Sbjct: 708 LLSNIYADAGRWDDVSKVRTKLHETGVPKQPGFTMI 743
Score = 222 bits (566), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 129/496 (26%), Positives = 251/496 (50%), Gaps = 39/496 (7%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E+ +VS + C+ + G+++H I + L + N L+++Y+KCG + +A +
Sbjct: 234 EITMVSLVSTCAKLKDLEMGKRLHLYIVDNKLWIRGSLLNCLVDMYSKCGKMDEAHGLLS 293
Query: 83 SC--STLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREAL 140
C S +D V ++SGY+++++++ AR++FDK + VS+T+M+ G+ Q + E+L
Sbjct: 294 RCDESEVDVVLWTTLVSGYVKSNKIDKARQLFDKMNERSLVSWTTMMSGYVQGGYYCESL 353
Query: 141 EVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIK--LMIDGFVIISTNLLN 198
E+F+ MR VIP+EV L +V+S+ VHL R +H ++ +++DGF + LL+
Sbjct: 354 ELFQQMRFENVIPDEVALVTVLSACVHLEDFDLGRSVHAFIVTYGMLVDGF--LGNALLD 411
Query: 199 MYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTM 258
+Y C L EA F+++ ++ SWN ML+GF ++G V+ AR+ F +IP KD+VSW TM
Sbjct: 412 LYAKCGKLDEALRTFEQLPCKSAASWNSMLDGFCRSGGVDKARDFFNKIPEKDIVSWNTM 471
Query: 259 IDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGF 318
++ Y++ + +E+ ++ M + P+ ++ L+S+C + A G+ ++ I K
Sbjct: 472 VNAYVKHDLFNESFEIFCKMQSSNVKPDKTTLISLLSSCAKVGALNHGIWVNVYIEKNEI 531
Query: 319 DCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNN 378
+ +I Y CG + +A F I+ ++ W A++A + G +A L+
Sbjct: 532 GIDAMLGTALIDMYGKCGCVEMAYEIFTQIIEKNVFVWTAMMAAYAMEGQALEAIDLYLE 591
Query: 379 MQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG 438
M++R GVKP+ +T +++ A + G + EG
Sbjct: 592 MEER-------------------------------GVKPDHVTFIALLAACSHGGLVDEG 620
Query: 439 -RWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGL 497
++ ++ +I + ++D+ + G + + F VS W++++
Sbjct: 621 YKYFNKLRSFYNIIPTIHHYGCMVDLLGRVGHLEETVK-FIERMPIEPDVSIWSSLMRAC 679
Query: 498 AMHGDANLTLKIYSDL 513
H + L + + L
Sbjct: 680 RSHHNVELAEQAFKQL 695
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 110/539 (20%), Positives = 213/539 (39%), Gaps = 79/539 (14%)
Query: 151 VIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEAR 210
+PN S +S S+H + H ++ I + +N+ + + L+ A
Sbjct: 5 TLPN--IFFSSLSPSIHKPPTLNPKTSHSVLRPHWIIDLLKSCSNIREFSPIHAHLITAN 62
Query: 211 SLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSE 270
+ D ++++ + +N ++ A ++ + + W T+++ L+ E
Sbjct: 63 LIHDPEITSQVLAFLLSVNN------LDCAHQILSYSHEPESIIWNTLLENKLKEGCPQE 116
Query: 271 ALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIH 330
L Y M+ G+ + LI AC + G ++H I+K GF + ++
Sbjct: 117 VLECYYHMVTQGVLLDISTFHFLIHACCKNFDVKLGSEVHGRILKCGFGRNKSLNNNLMG 176
Query: 331 FYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAM 390
Y+ CG++ FE + SWN +I+ ++ GM +
Sbjct: 177 LYSKCGKLKEVCQLFEKMTHRDVISWNTMISCYVLKGMYRE------------------- 217
Query: 391 ISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSI 450
AL+LF M+ +GV P+EITMVS+ A L+ G+ H Y+++N +
Sbjct: 218 ------------ALDLFDEMLVSGVLPDEITMVSLVSTCAKLKDLEMGKRLHLYIVDNKL 265
Query: 451 TLNDNLSAAIIDMYAKCG---------------------------------SINTAFEVF 477
+ +L ++DMY+KCG I+ A ++F
Sbjct: 266 WIRGSLLNCLVDMYSKCGKMDEAHGLLSRCDESEVDVVLWTTLVSGYVKSNKIDKARQLF 325
Query: 478 YHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGL 537
+ +R S+ W ++ G G +L+++ + N+ + + + VLS C H
Sbjct: 326 DKMNER--SLVSWTTMMSGYVQGGYYCESLELFQQMRFENVIPDEVALVTVLSACVHLED 383
Query: 538 VDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLL 597
DLG R + Y + D ++DL + G+L++A +P K+ W ++L
Sbjct: 384 FDLG-RSVHAFIVTYGMLVDGFLGNALLDLYAKCGKLDEALRTFEQLPCKS-AASWNSML 441
Query: 598 AASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMK 656
G V ++A + S + N Y + ++F I +M+ +K
Sbjct: 442 DGFCRSGGV---DKARDFFNKIPEKDIVSWNTMVNAYVKHDLFNESFEIFCKMQSSNVK 497
>gi|359480846|ref|XP_002280702.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Vitis vinifera]
Length = 785
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 227/626 (36%), Positives = 366/626 (58%), Gaps = 4/626 (0%)
Query: 42 GQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIR 101
G+ IH+ I K+GL F+ N+L+N YAK G I A +FD + NI++SGY +
Sbjct: 32 GKSIHARIIKAGLHLGVFLMNNLMNFYAKTGFIYDAHRVFDEMPVKSVFSWNIILSGYAK 91
Query: 102 NDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASV 161
RL +A VF++ P VS+T+MI+G+ Q + A+ +FR+M V P + TL +V
Sbjct: 92 GGRLEEAHRVFEEMPEPDSVSWTAMIVGYNQMGQFENAIGMFREMVSDDVPPTQFTLTNV 151
Query: 162 ISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNI 221
++S + + R +H V+K + ++ ++ +LLNMY V A+ +FD MK ++
Sbjct: 152 LASCAAVECLGIGRKVHSFVVKHGLSSYISVANSLLNMYAKSGDPVTAKIVFDRMKLKST 211
Query: 222 VSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCD 281
SWN M++ ++GLV+LA+ FE++ +DVVSW MI GY Q EAL ++ ML D
Sbjct: 212 SSWNTMISSHMQSGLVDLAQVQFEQMIERDVVSWNAMISGYNQHGFDREALDIFSKMLMD 271
Query: 282 GIA-PNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINL 340
+ P+ + +SAC G QIH+ I++ FD + + +I Y+ G + +
Sbjct: 272 SSSKPDKFTLASALSACANLENLKLGKQIHAHIIRTEFDTFGAVGNALISMYSKSGGVEI 331
Query: 341 ARLQFELGIKDH--IASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNE 398
A+ E + + + ++ AL+ G+++ G I AR++F++++ RDV +W+AMI GY QN
Sbjct: 332 AQKIIEQSMISNLDVIAFTALLDGYVKLGDINPARRIFDSLRVRDVVAWTAMIVGYVQNG 391
Query: 399 QPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSA 458
A+ELF M+ G KPN T+ ++ +S +L GR H + + ++S
Sbjct: 392 FNQDAMELFRSMIKEGPKPNNYTLATMLSVSSSLASLDHGRQIHASATRSGNASSVSVSN 451
Query: 459 AIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNI 518
A+I MYAK GSIN A VF I + +++ W ++I LA HG L ++ + + I
Sbjct: 452 ALITMYAKSGSINDARWVFNLIHWKRDTIT-WTSMIIALAQHGLGEEALTLFERMLENGI 510
Query: 519 KLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAE 578
K + IT++GVLS C H GLV+ G Y+ M++ + + P HY CM+DL GRAG L++A
Sbjct: 511 KPDHITYVGVLSACTHVGLVEQGRSYYNLMQNAHKIIPTPSHYACMIDLFGRAGLLQEAH 570
Query: 579 EVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAG 638
I +MP++ DV+ WG+LLA+ ++H NVE+ E AA+ L ++P + + L+N+Y+ G
Sbjct: 571 AFIENMPIEPDVIAWGSLLASCKVHKNVELAEVAAERLLLIEPENSGAYSALANVYSACG 630
Query: 639 RWEDAFSIRKEMRDCGMKRLPGFSGV 664
+WE+A +IRK M+D G+K+ GFS V
Sbjct: 631 QWENAANIRKSMKDKGVKKDQGFSWV 656
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 127/488 (26%), Positives = 236/488 (48%), Gaps = 37/488 (7%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
+ L + L C+A + G+++HS + K GL S + NSL+N+YAK G AK +FD
Sbjct: 145 QFTLTNVLASCAAVECLGIGRKVHSFVVKHGLSSYISVANSLLNMYAKSGDPVTAKIVFD 204
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+ N MIS ++++ ++ A+ F++ + VS+ +MI G+ Q+ REAL++
Sbjct: 205 RMKLKSTSSWNTMISSHMQSGLVDLAQVQFEQMIERDVVSWNAMISGYNQHGFDREALDI 264
Query: 143 FRDMRI-LGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYC 201
F M + P++ TLAS +S+ +L + + +H +I+ D F + L++MY
Sbjct: 265 FSKMLMDSSSKPDKFTLASALSACANLENLKLGKQIHAHIIRTEFDTFGAVGNALISMYS 324
Query: 202 VCSSLVEARSLFDE--MKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMI 259
+ A+ + ++ + +++++ +L+G+ K G + AR +F+ + +DVV+W MI
Sbjct: 325 KSGGVEIAQKIIEQSMISNLDVIAFTALLDGYVKLGDINPARRIFDSLRVRDVVAWTAMI 384
Query: 260 DGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFD 319
GY+Q +A+ ++R+M+ +G PN+ + ++S + G QIH+ ++G
Sbjct: 385 VGYVQNGFNQDAMELFRSMIKEGPKPNNYTLATMLSVSSSLASLDHGRQIHASATRSGNA 444
Query: 320 CYDFIQATIIHFYAACGRINLARLQFEL-GIKDHIASWNALIAGFIRNGMIEDARQLFNN 378
+ +I YA G IN AR F L K +W ++I ++G+ E+
Sbjct: 445 SSVSVSNALITMYAKSGSINDARWVFNLIHWKRDTITWTSMIIALAQHGLGEE------- 497
Query: 379 MQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG 438
AL LF M++ G+KP+ IT V V A G +++G
Sbjct: 498 ------------------------ALTLFERMLENGIKPDHITYVGVLSACTHVGLVEQG 533
Query: 439 RWAHEYVLN-NSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGL 497
R + + N + I + A +ID++ + G + A F V W +++
Sbjct: 534 RSYYNLMQNAHKIIPTPSHYACMIDLFGRAGLLQEA-HAFIENMPIEPDVIAWGSLLASC 592
Query: 498 AMHGDANL 505
+H + L
Sbjct: 593 KVHKNVEL 600
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 106/416 (25%), Positives = 194/416 (46%), Gaps = 61/416 (14%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
+ L SAL C+ + G+QIH+ I ++ ++ + N+LI++Y+K G + A+ + +
Sbjct: 278 KFTLASALSACANLENLKLGKQIHAHIIRTEFDTFGAVGNALISMYSKSGGVEIAQKIIE 337
Query: 83 SC--STLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREAL 140
S LD +A ++ GY++ +N AR +FD ++ V++T+MI+G+ QN ++A+
Sbjct: 338 QSMISNLDVIAFTALLDGYVKLGDINPARRIFDSLRVRDVVAWTAMIVGYVQNGFNQDAM 397
Query: 141 EVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMY 200
E+FR M G PN TLA+++S S L + R +H + V +S L+ MY
Sbjct: 398 ELFRSMIKEGPKPNNYTLATMLSVSSSLASLDHGRQIHASATRSGNASSVSVSNALITMY 457
Query: 201 CVCSSLVEARSLFDEMK-ERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMI 259
S+ +AR +F+ + +R+ ++W M+ A+ GL E
Sbjct: 458 AKSGSINDARWVFNLIHWKRDTITWTSMIIALAQHGLGE--------------------- 496
Query: 260 DGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFD 319
EALT++ ML +GI P+ + V ++SAC H +V+ G
Sbjct: 497 ----------EALTLFERMLENGIKPDHITYVGVLSAC-----------THVGLVEQGRS 535
Query: 320 CYDFIQ------------ATIIHFYAACGRINLARLQFE-LGIKDHIASWNALIAGFIRN 366
Y+ +Q A +I + G + A E + I+ + +W +L+A +
Sbjct: 536 YYNLMQNAHKIIPTPSHYACMIDLFGRAGLLQEAHAFIENMPIEPDVIAWGSLLASCKVH 595
Query: 367 GMIEDARQLFNNM---QKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNE 419
+E A + + + ++SA+ + Y+ Q A + M D GVK ++
Sbjct: 596 KNVELAEVAAERLLLIEPENSGAYSALANVYSACGQWENAANIRKSMKDKGVKKDQ 651
>gi|224096249|ref|XP_002310592.1| predicted protein [Populus trichocarpa]
gi|222853495|gb|EEE91042.1| predicted protein [Populus trichocarpa]
Length = 747
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 225/619 (36%), Positives = 361/619 (58%), Gaps = 4/619 (0%)
Query: 49 IFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDA 108
+ K GL + ++ N+L+NLYAK G A +F+ + N ++SGY + +L A
Sbjct: 1 MVKLGLTFSVYLMNNLMNLYAKTGFHLDAHDLFNEMPVKTTFSWNTILSGYAKQGKLEKA 60
Query: 109 REVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHL 168
+VFD P++ VS+T++I+G+ Q + +A+++F DM V+P + TL +V++S
Sbjct: 61 HQVFDLIPVRDSVSWTTIIVGYNQMGRFEDAIKIFVDMVKDKVLPTQFTLTNVLASCAAT 120
Query: 169 GGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVML 228
G + +H V+KL + V ++ +LLNMY L A+ +FD MK RN SWN M+
Sbjct: 121 GSRGIGKKVHSFVVKLGLHACVPVANSLLNMYAKTGDLKMAKVVFDRMKLRNTSSWNAMI 180
Query: 229 NGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCD-GIAPND 287
+ G V+LA FE + +D+VSW +MI G Q +EAL + ++L D + P+
Sbjct: 181 SLHMNCGRVDLALAQFELLSERDIVSWNSMIAGCNQHGFDNEALQFFSSILKDTSLKPDR 240
Query: 288 VMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFEL 347
+ +SAC G QIH IV+ FD + +I YA G + +AR E
Sbjct: 241 FSLASALSACANLEKLSFGKQIHGYIVRTMFDASGAVGNALISMYAKSGGVEIARRIIEQ 300
Query: 348 -GIKD-HIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALE 405
GI D + ++ AL+ G+++ G I ARQ+FN+++ DV +W+AMI GY QN N A+E
Sbjct: 301 SGISDLDVIAFTALLNGYVKLGDITPARQIFNSLKDPDVVAWTAMIVGYVQNGLNNDAIE 360
Query: 406 LFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYA 465
+F MV G +PN T+ ++ A +S +L G+ H + + L+ ++ A+ MYA
Sbjct: 361 VFKTMVSEGPRPNSFTLAAMLSASSSVTSLNHGKQIHASAIRSGEALSPSVGNALTTMYA 420
Query: 466 KCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITF 525
K GSIN A +VF +R +VS W ++I LA HG ++++ + IK + IT+
Sbjct: 421 KAGSINGARKVFNLLRQNRDTVS-WTSMIMALAQHGLGEEAIELFEQMLTLGIKPDHITY 479
Query: 526 IGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMP 585
+GVLS C H GLV+ G YF MK+V+ ++P L HY CMVDL GRAG L++A + + +MP
Sbjct: 480 VGVLSACTHGGLVEQGRSYFDLMKNVHKIDPTLSHYACMVDLFGRAGLLQEAYKFVENMP 539
Query: 586 MKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFS 645
M+ DV+ WG+LL++ +++ NV++ + AA+ L ++P++ + L+N+Y+ G+W+DA
Sbjct: 540 MEPDVIAWGSLLSSCKVYKNVDLAKVAAERLLLIEPNNSGAYSALANVYSSCGKWDDAAK 599
Query: 646 IRKEMRDCGMKRLPGFSGV 664
IRK M+ G+K+ G S V
Sbjct: 600 IRKLMKARGVKKEQGLSWV 618
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 125/489 (25%), Positives = 240/489 (49%), Gaps = 39/489 (7%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
+ L + L C+A + G+++HS + K GL + + NSL+N+YAK G + AK +FD
Sbjct: 107 QFTLTNVLASCAATGSRGIGKKVHSFVVKLGLHACVPVANSLLNMYAKTGDLKMAKVVFD 166
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+ + N MIS ++ R++ A F+ + VS+ SMI G Q+ EAL+
Sbjct: 167 RMKLRNTSSWNAMISLHMNCGRVDLALAQFELLSERDIVSWNSMIAGCNQHGFDNEALQF 226
Query: 143 FRD-MRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYC 201
F ++ + P+ +LAS +S+ +L + + +HG +++ M D + L++MY
Sbjct: 227 FSSILKDTSLKPDRFSLASALSACANLEKLSFGKQIHGYIVRTMFDASGAVGNALISMYA 286
Query: 202 VCSSLVEARSLFDE--MKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMI 259
+ AR + ++ + + +++++ +LNG+ K G + AR++F + DVV+W MI
Sbjct: 287 KSGGVEIARRIIEQSGISDLDVIAFTALLNGYVKLGDITPARQIFNSLKDPDVVAWTAMI 346
Query: 260 DGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFD 319
GY+Q ++A+ +++ M+ +G PN + ++SA + G QIH+ +++G
Sbjct: 347 VGYVQNGLNNDAIEVFKTMVSEGPRPNSFTLAAMLSASSSVTSLNHGKQIHASAIRSGEA 406
Query: 320 CYDFIQATIIHFYAACGRINLARLQFELGIKDH-IASWNALIAGFIRNGMIEDARQLFNN 378
+ + YA G IN AR F L ++ SW ++I ++G+ E+
Sbjct: 407 LSPSVGNALTTMYAKAGSINGARKVFNLLRQNRDTVSWTSMIMALAQHGLGEE------- 459
Query: 379 MQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG 438
A+ELF M+ G+KP+ IT V V A G +++G
Sbjct: 460 ------------------------AIELFEQMLTLGIKPDHITYVGVLSACTHGGLVEQG 495
Query: 439 RWAHEYVLNNSITLNDNLS--AAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICG 496
R ++ ++ N ++ LS A ++D++ + G + A++ F V W +++
Sbjct: 496 R-SYFDLMKNVHKIDPTLSHYACMVDLFGRAGLLQEAYK-FVENMPMEPDVIAWGSLLSS 553
Query: 497 LAMHGDANL 505
++ + +L
Sbjct: 554 CKVYKNVDL 562
>gi|297821407|ref|XP_002878586.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324425|gb|EFH54845.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 786
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 222/624 (35%), Positives = 361/624 (57%), Gaps = 4/624 (0%)
Query: 42 GQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIR 101
Q +H + KSGL + ++ N+L+N+Y+K G A+ +FD + N ++S Y +
Sbjct: 33 AQLVHCRVIKSGLVFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYAK 92
Query: 102 NDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASV 161
++ + E FD+ P + VS+T+MI+G+ + +A+ + +M G+ P++ TL +V
Sbjct: 93 RGDMDSSCEFFDRLPQRDSVSWTTMIVGYKNIGQYHKAIRIMGEMMREGIEPSQFTLTNV 152
Query: 162 ISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNI 221
++S + + +H ++KL + G V +S +LLNMY C + A+ +FD M ++I
Sbjct: 153 LASVAATRCLETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKVVFDRMVVKDI 212
Query: 222 VSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCD 281
SWN M+ + G ++LA FE++ +D+V+W +MI GY Q AL M+ ML D
Sbjct: 213 SSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGYNQRGYDLRALDMFSKMLRD 272
Query: 282 G-IAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINL 340
++P+ + ++SAC G QIHS IV GFD + +I Y+ CG +
Sbjct: 273 SMLSPDRFTLASVLSACANLEKLCIGEQIHSHIVTTGFDISGIVLNALISMYSRCGGVET 332
Query: 341 ARLQFEL-GIKD-HIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNE 398
AR E G KD I + AL+ G+I+ G + +A+ +F++++ RDV +W+AMI GY Q+
Sbjct: 333 ARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNEAKNIFDSLKDRDVVAWTAMIVGYEQHG 392
Query: 399 QPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSA 458
A+ LF MV +PN T+ ++ +S +L G+ H + + + ++S
Sbjct: 393 LYGEAINLFRSMVGEEQRPNSYTLAAMLSVASSLASLGHGKQIHGSAVKSGEIYSVSVSN 452
Query: 459 AIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNI 518
A+I MYAK GSI +A F IR +VS W ++I LA HG A L+++ + +
Sbjct: 453 ALITMYAKAGSITSASRAFDLIRCERDTVS-WTSMIIALAQHGHAEEALELFETMLMEGL 511
Query: 519 KLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAE 578
+ + IT++GV S C HAGLV+ G +YF MK V + P L HY CMVDL GRAG L++A+
Sbjct: 512 RPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQ 571
Query: 579 EVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAG 638
E I MP++ DVV WG+LL+A R++ N+++G+ AA+ L L+P + + L+N+Y+ G
Sbjct: 572 EFIEKMPIEPDVVTWGSLLSACRVYKNIDLGKVAAERLLLLEPENSGAYSALANLYSACG 631
Query: 639 RWEDAFSIRKEMRDCGMKRLPGFS 662
+WE+A IRK M+D +K+ GFS
Sbjct: 632 KWEEAAKIRKSMKDGRVKKEQGFS 655
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 133/493 (26%), Positives = 237/493 (48%), Gaps = 45/493 (9%)
Query: 170 GIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLN 229
G + +++H VIK + V + NL+N+Y + AR LFDEM R SWN +L+
Sbjct: 29 GRFTAQLVHCRVIKSGLVFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLS 88
Query: 230 GFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVM 289
+AK G ++ + E F+R+P +D VSW TMI GY + + +A+ + M+ +GI P+
Sbjct: 89 AYAKRGDMDSSCEFFDRLPQRDSVSWTTMIVGYKNIGQYHKAIRIMGEMMREGIEPSQFT 148
Query: 290 IVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGI 349
+ +++++ G ++HS IVK G + ++++ YA CG +A++ F+ +
Sbjct: 149 LTNVLASVAATRCLETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKVVFDRMV 208
Query: 350 KDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHG 409
I+SWNA+IA ++ G ++ A F M +RD+ +W++MISGY Q AL++F
Sbjct: 209 VKDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGYNQRGYDLRALDMFSK 268
Query: 410 MV-DAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCG 468
M+ D+ + P+ T+ SV A A+ L G H +++ ++ + A+I MY++CG
Sbjct: 269 MLRDSMLSPDRFTLASVLSACANLEKLCIGEQIHSHIVTTGFDISGIVLNALISMYSRCG 328
Query: 469 SINTAFE---------------------------------VFYHIRDRTTSVSPWNAIIC 495
+ TA +F ++DR V W A+I
Sbjct: 329 GVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNEAKNIFDSLKDR--DVVAWTAMIV 386
Query: 496 GLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKS-MKS--VY 552
G HG + ++ + + NS T +LS + G++ S +KS +Y
Sbjct: 387 GYEQHGLYGEAINLFRSMVGEEQRPNSYTLAAMLSVASSLASLGHGKQIHGSAVKSGEIY 446
Query: 553 NVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERA 612
+V ++ + +AG + A + + D V W +++ A HG+ E
Sbjct: 447 SVSVS----NALITMYAKAGSITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALEL 502
Query: 613 AKS--LAGLQPSH 623
++ + GL+P H
Sbjct: 503 FETMLMEGLRPDH 515
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 146/567 (25%), Positives = 255/567 (44%), Gaps = 74/567 (13%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
+ L + L +A + G+++HS I K GL N + NSL+N+YAKCG AK +FD
Sbjct: 146 QFTLTNVLASVAATRCLETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKVVFD 205
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
D + N MI+ +++ +++ A F++ + V++ SMI G+ Q AL++
Sbjct: 206 RMVVKDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGYNQRGYDLRALDM 265
Query: 143 FRDM-RILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYC 201
F M R + P+ TLASV+S+ +L + +H ++ D I+ L++MY
Sbjct: 266 FSKMLRDSMLSPDRFTLASVLSACANLEKLCIGEQIHSHIVTTGFDISGIVLNALISMYS 325
Query: 202 VCSSLVEARSLFDE--MKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMI 259
C + AR L ++ K+ I + +L+G+ K G + A+ +F+ + +DVV+W MI
Sbjct: 326 RCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNEAKNIFDSLKDRDVVAWTAMI 385
Query: 260 DGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFD 319
GY Q EA+ ++R+M+ + PN + ++S + G G QIH VK+G
Sbjct: 386 VGYEQHGLYGEAINLFRSMVGEEQRPNSYTLAAMLSVASSLASLGHGKQIHGSAVKSGEI 445
Query: 320 CYDFIQATIIHFYAACGRINLARLQFEL-GIKDHIASWNALIAGFIRNGMIEDARQLFNN 378
+ +I YA G I A F+L + SW ++I ++G E+
Sbjct: 446 YSVSVSNALITMYAKAGSITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEE------- 498
Query: 379 MQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG 438
ALELF M+ G++P+ IT V VF A +G + +G
Sbjct: 499 ------------------------ALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQG 534
Query: 439 RWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLA 498
R + F ++D + + C +
Sbjct: 535 R-----------------------------------QYFDMMKDVDKIIPTLSHYACMVD 559
Query: 499 MHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDL 558
+ G A L + +EK I+ + +T+ +LS C +DLG+ + + + +EP+
Sbjct: 560 LFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVYKNIDLGK---VAAERLLLLEPEN 616
Query: 559 K-HYGCMVDLLGRAGQLEDAEEVIRSM 584
Y + +L G+ E+A ++ +SM
Sbjct: 617 SGAYSALANLYSACGKWEEAAKIRKSM 643
>gi|15227144|ref|NP_179798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206010|sp|Q9SHZ8.1|PP168_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g22070
gi|4587589|gb|AAD25817.1| hypothetical protein [Arabidopsis thaliana]
gi|330252165|gb|AEC07259.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 786
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 224/624 (35%), Positives = 358/624 (57%), Gaps = 4/624 (0%)
Query: 42 GQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIR 101
Q +H + KSGL + ++ N+L+N+Y+K G A+ +FD + N ++S Y +
Sbjct: 33 AQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSK 92
Query: 102 NDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASV 161
++ E FD+ P + VS+T+MI+G+ + +A+ V DM G+ P + TL +V
Sbjct: 93 RGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNV 152
Query: 162 ISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNI 221
++S + + +H ++KL + G V +S +LLNMY C + A+ +FD M R+I
Sbjct: 153 LASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDI 212
Query: 222 VSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCD 281
SWN M+ + G ++LA FE++ +D+V+W +MI G+ Q AL ++ ML D
Sbjct: 213 SSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRD 272
Query: 282 GI-APNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINL 340
+ +P+ + ++SAC G QIHS IV GFD + +I Y+ CG +
Sbjct: 273 SLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVET 332
Query: 341 ARLQFEL-GIKD-HIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNE 398
AR E G KD I + AL+ G+I+ G + A+ +F +++ RDV +W+AMI GY Q+
Sbjct: 333 ARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHG 392
Query: 399 QPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSA 458
A+ LF MV G +PN T+ ++ +S +L G+ H + + + ++S
Sbjct: 393 SYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSN 452
Query: 459 AIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNI 518
A+I MYAK G+I +A F IR +VS W ++I LA HG A L+++ + +
Sbjct: 453 ALITMYAKAGNITSASRAFDLIRCERDTVS-WTSMIIALAQHGHAEEALELFETMLMEGL 511
Query: 519 KLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAE 578
+ + IT++GV S C HAGLV+ G +YF MK V + P L HY CMVDL GRAG L++A+
Sbjct: 512 RPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQ 571
Query: 579 EVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAG 638
E I MP++ DVV WG+LL+A R+H N+++G+ AA+ L L+P + + L+N+Y+ G
Sbjct: 572 EFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACG 631
Query: 639 RWEDAFSIRKEMRDCGMKRLPGFS 662
+WE+A IRK M+D +K+ GFS
Sbjct: 632 KWEEAAKIRKSMKDGRVKKEQGFS 655
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 130/493 (26%), Positives = 235/493 (47%), Gaps = 45/493 (9%)
Query: 170 GIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLN 229
G + +++H VIK + V + NL+N+Y + AR LFDEM R SWN +L+
Sbjct: 29 GRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLS 88
Query: 230 GFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVM 289
++K G ++ E F+++P +D VSW TMI GY + + +A+ + M+ +GI P
Sbjct: 89 AYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFT 148
Query: 290 IVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGI 349
+ +++++ G ++HS IVK G + ++++ YA CG +A+ F+ +
Sbjct: 149 LTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMV 208
Query: 350 KDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHG 409
I+SWNA+IA ++ G ++ A F M +RD+ +W++MISG+ Q AL++F
Sbjct: 209 VRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSK 268
Query: 410 MV-DAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCG 468
M+ D+ + P+ T+ SV A A+ L G+ H +++ ++ + A+I MY++CG
Sbjct: 269 MLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCG 328
Query: 469 SINTAFE---------------------------------VFYHIRDRTTSVSPWNAIIC 495
+ TA +F ++DR V W A+I
Sbjct: 329 GVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDR--DVVAWTAMIV 386
Query: 496 GLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKS-MKS--VY 552
G HG + ++ + + NS T +LS + G++ S +KS +Y
Sbjct: 387 GYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIY 446
Query: 553 NVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERA 612
+V ++ + +AG + A + + D V W +++ A HG+ E
Sbjct: 447 SVSVS----NALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALEL 502
Query: 613 AKS--LAGLQPSH 623
++ + GL+P H
Sbjct: 503 FETMLMEGLRPDH 515
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 147/567 (25%), Positives = 254/567 (44%), Gaps = 74/567 (13%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
+ L + L +A + G+++HS I K GL N + NSL+N+YAKCG AK +FD
Sbjct: 146 QFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFD 205
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
D + N MI+ +++ +++ A F++ + V++ SMI GF Q AL++
Sbjct: 206 RMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDI 265
Query: 143 FRDM-RILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYC 201
F M R + P+ TLASV+S+ +L + + +H ++ D I+ L++MY
Sbjct: 266 FSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYS 325
Query: 202 VCSSLVEARSLFDE--MKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMI 259
C + AR L ++ K+ I + +L+G+ K G + A+ +F + +DVV+W MI
Sbjct: 326 RCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMI 385
Query: 260 DGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFD 319
GY Q EA+ ++R+M+ G PN + ++S + G QIH VK+G
Sbjct: 386 VGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEI 445
Query: 320 CYDFIQATIIHFYAACGRINLARLQFEL-GIKDHIASWNALIAGFIRNGMIEDARQLFNN 378
+ +I YA G I A F+L + SW ++I ++G E+
Sbjct: 446 YSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEE------- 498
Query: 379 MQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG 438
ALELF M+ G++P+ IT V VF A +G + +G
Sbjct: 499 ------------------------ALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQG 534
Query: 439 RWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLA 498
R + F ++D + + C +
Sbjct: 535 R-----------------------------------QYFDMMKDVDKIIPTLSHYACMVD 559
Query: 499 MHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDL 558
+ G A L + +EK I+ + +T+ +LS C +DLG+ + + + +EP+
Sbjct: 560 LFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGK---VAAERLLLLEPEN 616
Query: 559 K-HYGCMVDLLGRAGQLEDAEEVIRSM 584
Y + +L G+ E+A ++ +SM
Sbjct: 617 SGAYSALANLYSACGKWEEAAKIRKSM 643
>gi|449446125|ref|XP_004140822.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 809
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 212/590 (35%), Positives = 334/590 (56%), Gaps = 33/590 (5%)
Query: 104 RLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVIS 163
++ R +F+ C + MI + Q + A +++ M + + T +I
Sbjct: 27 HIDYTRRIFNFIENTNCFMWNMMIRAYIQTNSPHFAFTLYKSMLSNYLGADNYTYPLLIQ 86
Query: 164 SSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVS 223
+ WE + +H V+KL D V + L+N + VCS++ +A +F+E + VS
Sbjct: 87 ACSIRRSEWEAKQVHNHVLKLGFDSDVYVRNTLINCFSVCSNMTDACRVFNESSVLDSVS 146
Query: 224 WNVMLNGFAKAGLVELARELFERIPS-------------------------------KDV 252
WN +L G+ + G VE A+ ++ ++P KD+
Sbjct: 147 WNSILAGYIEIGNVEEAKHIYHQMPERSIIASNSMIVLFGMRGLVVEACKLFDEMLEKDM 206
Query: 253 VSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSI 312
V+W +I + Q E EA+ + M G+ ++V+ V +SAC + G IHS+
Sbjct: 207 VTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNMGKLIHSL 266
Query: 313 IVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDA 372
+K G + Y +Q +I+ Y+ CG I +AR F+ + SWN++I+G+++ ++++A
Sbjct: 267 SLKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNA 326
Query: 373 RQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASS 432
+ +F++M ++DV SWS+MISGYAQN+ + L LF M +G KP+E T+VSV A A
Sbjct: 327 KAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISACARL 386
Query: 433 GTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNA 492
L++G+W H Y+ N +T+N L +IDMY KCG + TA EVFY + ++ +S WNA
Sbjct: 387 AALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMIEK--GISTWNA 444
Query: 493 IICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVY 552
+I GLAM+G +L ++S+++K ++ N ITF+GVL C H GLVD G+ +F SM +
Sbjct: 445 LILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDH 504
Query: 553 NVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERA 612
++P++KHYGCMVDLLGRAG+L++AEE++ MPM DV WG LL A + HG+ E+G R
Sbjct: 505 KIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALLGACKKHGDSEMGRRV 564
Query: 613 AKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
+ L LQP H VLLSNIYA G+W+D IR M + ++PG S
Sbjct: 565 GRKLIELQPDHDGFHVLLSNIYASKGKWDDVLEIRGMMTKHRVLKIPGCS 614
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 147/540 (27%), Positives = 265/540 (49%), Gaps = 72/540 (13%)
Query: 7 HSVFNSQKANLQN----SDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQN 62
H F K+ L N +Y L+ ++ CS + + +Q+H+ + K G +S+ +++N
Sbjct: 60 HFAFTLYKSMLSNYLGADNYTYPLL--IQACSIRRSEWEAKQVHNHVLKLGFDSDVYVRN 117
Query: 63 SLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTP------ 116
+LIN ++ C ++ A +F+ S LD V+ N +++GYI + +A+ ++ + P
Sbjct: 118 TLINCFSVCSNMTDACRVFNESSVLDSVSWNSILAGYIEIGNVEEAKHIYHQMPERSIIA 177
Query: 117 --------------IKCC-----------VSYTSMIMGFAQNDCWREALEVFRDMRILGV 151
++ C V+++++I F QN+ + EA+ F M +GV
Sbjct: 178 SNSMIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGV 237
Query: 152 IPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARS 211
+ +EV S +S+ +L + +++H L +K+ + ++ + L+ MY C ++ AR
Sbjct: 238 MVDEVVAVSALSACANLLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARK 297
Query: 212 LFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEA 271
LFDE +++SWN M++G+ K LV+ A+ +F+ +P KDVVSW +MI GY Q + E
Sbjct: 298 LFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDET 357
Query: 272 LTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHF 331
L +++ M G P++ +V +ISAC R A +G +H+ I + G + T+I
Sbjct: 358 LALFQEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDM 417
Query: 332 YAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMI 391
Y CG + A F I+ I++WNALI G NG++E + +F+NM+K
Sbjct: 418 YMKCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKK---------- 467
Query: 392 SGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVL--NNS 449
V PNEIT + V A G + EG+ H Y + ++
Sbjct: 468 ---------------------CHVTPNEITFMGVLGACRHMGLVDEGQ-HHFYSMIHDHK 505
Query: 450 ITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKI 509
I N ++D+ + G + A E+ + T V+ W A++ HGD+ + ++
Sbjct: 506 IQPNVKHYGCMVDLLGRAGKLQEAEELLNRM-PMTPDVATWGALLGACKKHGDSEMGRRV 564
>gi|224124638|ref|XP_002330073.1| predicted protein [Populus trichocarpa]
gi|222871498|gb|EEF08629.1| predicted protein [Populus trichocarpa]
Length = 793
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 233/658 (35%), Positives = 348/658 (52%), Gaps = 68/658 (10%)
Query: 39 VSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLIS--QAKSMFDSCSTLDPVACNIMI 96
+ Q QI S + SG ++F + L+ + I+ Q+ +F + CN M+
Sbjct: 39 IKQFNQILSQMILSGFFKDSFAASRLLKFSTELPFININQSYQIFSHIENPNGFICNTMM 98
Query: 97 SGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEV 156
GY++ + +P K Y M+ D + + +F+
Sbjct: 99 KGYMQRN-----------SPCKAIWVYKFMLESNVAADNYTYPI-LFQ------------ 134
Query: 157 TLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEM 216
S S+ L ++ + + V+K+ D V I L+NMY VC +L +AR +FD
Sbjct: 135 ------SCSIRLAE-FDGKCIQDHVLKVGFDSDVYIQNTLINMYAVCGNLSDARKVFDGS 187
Query: 217 KERNIVSWNVMLNGFAKAGLVELARELFERIP---------------------------- 248
++VSWN ML G+ G VE A+++++R+P
Sbjct: 188 SVLDMVSWNSMLAGYVLVGNVEEAKDVYDRMPERNVIASNSMIVLFGKKGNVEEACKLFN 247
Query: 249 ---SKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGE 305
KD+VSW +I Y Q E EAL +++ M +GI ++V+++ ++SAC R +
Sbjct: 248 EMKQKDLVSWSALISCYEQNEMYEEALILFKEMNANGIMVDEVVVLSVLSACSRLLVVIT 307
Query: 306 GLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQF-ELGIKDHIASWNALIAGFI 364
G +H ++VK G + Y +Q +IH Y++C + A+ F E D I SWN++I+G++
Sbjct: 308 GKLVHGLVVKVGIETYVNLQNALIHMYSSCEEVVTAQKLFSESCCLDQI-SWNSMISGYV 366
Query: 365 RNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVS 424
+ G IE AR LF++M +D SWSAMISGYAQ ++ L LF M G KP+E +VS
Sbjct: 367 KCGEIEKARALFDSMPDKDNVSWSAMISGYAQQDRFTETLVLFQEMQIEGTKPDETILVS 426
Query: 425 VFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRT 484
V A L +G+W H Y+ N + +N L +I+MY K G + A EVF + ++
Sbjct: 427 VISACTHLAALDQGKWIHAYIRKNGLKINIILGTTLINMYMKLGCVEDALEVFKGLEEK- 485
Query: 485 TSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERY 544
VS WNA+I GLAM+G + +LK +S++++ + N ITF+ VL C H GLVD G R+
Sbjct: 486 -GVSTWNALILGLAMNGLVDKSLKTFSEMKEHGVTPNEITFVAVLGACRHMGLVDEGHRH 544
Query: 545 FKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHG 604
F SM + + P++KHYGCMVDLLGRAG L++AEE+I SMPM DV WG LL A + +G
Sbjct: 545 FNSMIQEHKIGPNIKHYGCMVDLLGRAGMLKEAEELIESMPMAPDVSTWGALLGACKKYG 604
Query: 605 NVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
+ E GER + L L P H VLLSNIYA G W D +R MR G+ + PG S
Sbjct: 605 DNETGERIGRKLVELHPDHDGFNVLLSNIYASKGNWVDVLEVRGMMRQHGVVKTPGCS 662
Score = 249 bits (635), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 153/521 (29%), Positives = 262/521 (50%), Gaps = 66/521 (12%)
Query: 14 KANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGL 73
++N+ +Y ++ + CS +A G+ I + K G +S+ +IQN+LIN+YA CG
Sbjct: 119 ESNVAADNYTYPIL--FQSCSIRLAEFDGKCIQDHVLKVGFDSDVYIQNTLINMYAVCGN 176
Query: 74 ISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFA-- 131
+S A+ +FD S LD V+ N M++GY+ + +A++V+D+ P + ++ SMI+ F
Sbjct: 177 LSDARKVFDGSSVLDMVSWNSMLAGYVLVGNVEEAKDVYDRMPERNVIASNSMIVLFGKK 236
Query: 132 -----------------------------QNDCWREALEVFRDMRILGVIPNEVTLASVI 162
QN+ + EAL +F++M G++ +EV + SV+
Sbjct: 237 GNVEEACKLFNEMKQKDLVSWSALISCYEQNEMYEEALILFKEMNANGIMVDEVVVLSVL 296
Query: 163 SSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIV 222
S+ L + +++HGLV+K+ I+ +V + L++MY C +V A+ LF E + +
Sbjct: 297 SACSRLLVVITGKLVHGLVVKVGIETYVNLQNALIHMYSSCEEVVTAQKLFSESCCLDQI 356
Query: 223 SWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDG 282
SWN M++G+ K G +E AR LF+ +P KD VSW MI GY Q +R +E L +++ M +G
Sbjct: 357 SWNSMISGYVKCGEIEKARALFDSMPDKDNVSWSAMISGYAQQDRFTETLVLFQEMQIEG 416
Query: 283 IAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLAR 342
P++ ++V +ISAC A +G IH+ I K G + T+I+ Y G + A
Sbjct: 417 TKPDETILVSVISACTHLAALDQGKWIHAYIRKNGLKINIILGTTLINMYMKLGCVEDAL 476
Query: 343 LQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNM 402
F+ + +++WNALI G NG+++ + + F+ M++
Sbjct: 477 EVFKGLEEKGVSTWNALILGLAMNGLVDKSLKTFSEMKEH-------------------- 516
Query: 403 ALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG-RWAHEYVLNNSITLNDNLSAAII 461
GV PNEIT V+V A G + EG R + + + I N ++
Sbjct: 517 -----------GVTPNEITFVAVLGACRHMGLVDEGHRHFNSMIQEHKIGPNIKHYGCMV 565
Query: 462 DMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGD 502
D+ + G + A E+ + VS W A++ +GD
Sbjct: 566 DLLGRAGMLKEAEELIESM-PMAPDVSTWGALLGACKKYGD 605
>gi|356502620|ref|XP_003520116.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Glycine max]
Length = 785
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 222/630 (35%), Positives = 358/630 (56%), Gaps = 11/630 (1%)
Query: 42 GQQIHSLIFKSGLES-NTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYI 100
G+ IH+ I K GL F+ N+L+NLY K G S A +FD + N ++S +
Sbjct: 31 GRCIHARIIKHGLRYLGVFLTNNLLNLYVKTGSSSDAHRLFDEMPLKTTFSWNTILSAHA 90
Query: 101 RNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLAS 160
+ L+ AR VFD+ P VS+T+MI+G+ ++ A+ F M G+ P + T +
Sbjct: 91 KAGNLDSARRVFDEIPQPDSVSWTTMIVGYNHLGLFKSAVHAFLRMVSSGISPTQFTFTN 150
Query: 161 VISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERN 220
V++S + + +H V+KL G V ++ +LLNMY C V A+ +FD M+ ++
Sbjct: 151 VLASCAAAQALDVGKKVHSFVVKLGQSGVVPVANSLLNMYAKCGDSVMAKVVFDRMRLKD 210
Query: 221 IVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAML- 279
+WN M++ + +LA LF+++ D+VSW ++I GY AL + ML
Sbjct: 211 TSTWNTMISMHMQFCQFDLALALFDQMTDPDIVSWNSIITGYCHQGYDIRALETFSFMLK 270
Query: 280 CDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRIN 339
+ P+ + ++SAC + G QIH+ IV+A D + +I YA G +
Sbjct: 271 SSSLKPDKFTLGSVLSACANRESLKLGKQIHAHIVRADVDIAGAVGNALISMYAKSGAVE 330
Query: 340 LARLQFEL-GIKD-HIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQN 397
+A E+ G ++ ++ +L+ G+ + G I+ AR +F++++ RDV +W+AMI GYAQN
Sbjct: 331 VAHRIVEITGTPSLNVIAFTSLLDGYFKIGDIDPARAIFDSLKHRDVVAWTAMIVGYAQN 390
Query: 398 EQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLS 457
+ AL LF M+ G KPN T+ +V I+S +L G+ H + + ++
Sbjct: 391 GLISDALVLFRLMIREGPKPNNYTLAAVLSVISSLASLDHGKQLHAVAIRLEEVSSVSVG 450
Query: 458 AAIIDMYAKCGSINTAFEVFYHI---RDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLE 514
A+I MY++ GSI A ++F HI RD T W ++I LA HG N ++++ +
Sbjct: 451 NALITMYSRSGSIKDARKIFNHICSYRDTLT----WTSMILSLAQHGLGNEAIELFEKML 506
Query: 515 KRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQL 574
+ N+K + IT++GVLS C H GLV+ G+ YF MK+V+N+EP HY CM+DLLGRAG L
Sbjct: 507 RINLKPDHITYVGVLSACTHVGLVEQGKSYFNLMKNVHNIEPTSSHYACMIDLLGRAGLL 566
Query: 575 EDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIY 634
E+A IR+MP++ DVV WG+LL++ R+H V++ + AA+ L + P++ + + L+N
Sbjct: 567 EEAYNFIRNMPIEPDVVAWGSLLSSCRVHKYVDLAKVAAEKLLLIDPNNSGAYLALANTL 626
Query: 635 ADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
+ G+WEDA +RK M+D +K+ GFS V
Sbjct: 627 SACGKWEDAAKVRKSMKDKAVKKEQGFSWV 656
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 138/539 (25%), Positives = 256/539 (47%), Gaps = 46/539 (8%)
Query: 20 SDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKS 79
S + + L C+A A+ G+++HS + K G + NSL+N+YAKCG AK
Sbjct: 142 SPTQFTFTNVLASCAAAQALDVGKKVHSFVVKLGQSGVVPVANSLLNMYAKCGDSVMAKV 201
Query: 80 MFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREA 139
+FD D N MIS +++ + + A +FD+ VS+ S+I G+ A
Sbjct: 202 VFDRMRLKDTSTWNTMISMHMQFCQFDLALALFDQMTDPDIVSWNSIITGYCHQGYDIRA 261
Query: 140 LEVFRDM-RILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLN 198
LE F M + + P++ TL SV+S+ + + + +H +++ +D + L++
Sbjct: 262 LETFSFMLKSSSLKPDKFTLGSVLSACANRESLKLGKQIHAHIVRADVDIAGAVGNALIS 321
Query: 199 MYCVCSSLVEARSLFD--EMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWG 256
MY ++ A + + N++++ +L+G+ K G ++ AR +F+ + +DVV+W
Sbjct: 322 MYAKSGAVEVAHRIVEITGTPSLNVIAFTSLLDGYFKIGDIDPARAIFDSLKHRDVVAWT 381
Query: 257 TMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKA 316
MI GY Q +S+AL ++R M+ +G PN+ + ++S + G Q+H++ ++
Sbjct: 382 AMIVGYAQNGLISDALVLFRLMIREGPKPNNYTLAAVLSVISSLASLDHGKQLHAVAIR- 440
Query: 317 GFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLF 376
L ++ NALI + R+G I+DAR++F
Sbjct: 441 ------------------------------LEEVSSVSVGNALITMYSRSGSIKDARKIF 470
Query: 377 NNM-QKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTL 435
N++ RD +W++MI AQ+ N A+ELF M+ +KP+ IT V V A G +
Sbjct: 471 NHICSYRDTLTWTSMILSLAQHGLGNEAIELFEKMLRINLKPDHITYVGVLSACTHVGLV 530
Query: 436 KEGRWAHEYVLN-NSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSP----W 490
++G+ + N ++I + A +ID+ + G + A+ R + P W
Sbjct: 531 EQGKSYFNLMKNVHNIEPTSSHYACMIDLLGRAGLLEEAYNFI-----RNMPIEPDVVAW 585
Query: 491 NAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMK 549
+++ +H +L K+ ++ NS ++ + +T G + + KSMK
Sbjct: 586 GSLLSSCRVHKYVDLA-KVAAEKLLLIDPNNSGAYLALANTLSACGKWEDAAKVRKSMK 643
>gi|225450539|ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 808
Score = 400 bits (1029), Expect = e-108, Method: Compositional matrix adjust.
Identities = 217/593 (36%), Positives = 330/593 (55%), Gaps = 41/593 (6%)
Query: 105 LNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISS 164
L+ + ++FD+ + +M+ + Q++ +AL +++ M V P+ T V+ +
Sbjct: 91 LDYSLQIFDRIENSNGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQA 150
Query: 165 S----VHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERN 220
+ GG + +H V+K+ D V + L+NMY VC ++ +AR LFDE +
Sbjct: 151 CAVRLLEFGG----KEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLD 206
Query: 221 IVSWNVMLNGFAKAGLVELARELFERIPS------------------------------- 249
VSWN +L G+ K G VE A+ +F+++P
Sbjct: 207 SVSWNSILAGYVKKGDVEEAKLIFDQMPQRNIVASNSMIVLLGKMGQVMEAWKLFNEMDE 266
Query: 250 KDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQI 309
KD+VSW +I GY Q EAL M+ M +G+ ++V++V ++SAC G I
Sbjct: 267 KDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACAHLSIVKTGKMI 326
Query: 310 HSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMI 369
H ++++ G + Y +Q +IH Y+ G I A+ F SWN++I+G ++ G +
Sbjct: 327 HGLVIRMGIESYVNLQNALIHMYSGSGEIMDAQKLFNGSHNLDQISWNSMISGCMKCGSV 386
Query: 370 EDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAI 429
E AR LF+ M ++D+ SWSA+ISGYAQ++ + L LFH M ++P+E +VSV A
Sbjct: 387 EKARALFDVMPEKDIVSWSAVISGYAQHDCFSETLALFHEMQLGQIRPDETILVSVISAC 446
Query: 430 ASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSP 489
L +G+W H Y+ N + +N L ++DMY KCG + A EVF + ++ VS
Sbjct: 447 THLAALDQGKWVHAYIRKNGLKVNVILGTTLLDMYMKCGCVENALEVFNGMEEK--GVSS 504
Query: 490 WNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMK 549
WNA+I GLA++G +L ++S+++ + N ITF+GVL C H GLVD G +F SM
Sbjct: 505 WNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFMGVLGACRHMGLVDEGRCHFASMI 564
Query: 550 SVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVG 609
+ +EP++KHYGCMVDLLGRAG L +AE++I SMPM DV WG LL A + HG+ E+G
Sbjct: 565 EKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIESMPMAPDVATWGALLGACKKHGDTEMG 624
Query: 610 ERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
ER + L LQP H VLLSNI+A G WED +R M+ G+ + PG S
Sbjct: 625 ERVGRKLIELQPDHDGFHVLLSNIFASKGDWEDVLEVRGMMKQQGVVKTPGCS 677
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 153/528 (28%), Positives = 258/528 (48%), Gaps = 66/528 (12%)
Query: 14 KANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGL 73
K N+ +Y LV ++ C+ + G++IH + K G +S+ ++QN+LIN+YA CG
Sbjct: 134 KNNVGPDNYTYPLV--VQACAVRLLEFGGKEIHDHVLKVGFDSDVYVQNTLINMYAVCGN 191
Query: 74 ISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPI---------------- 117
+ A+ +FD LD V+ N +++GY++ + +A+ +FD+ P
Sbjct: 192 MRDARKLFDESPVLDSVSWNSILAGYVKKGDVEEAKLIFDQMPQRNIVASNSMIVLLGKM 251
Query: 118 ---------------KCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVI 162
K VS++++I G+ QN + EAL +F +M G+ +EV + SV+
Sbjct: 252 GQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVL 311
Query: 163 SSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIV 222
S+ HL + +M+HGLVI++ I+ +V + L++MY +++A+ LF+ + +
Sbjct: 312 SACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSGSGEIMDAQKLFNGSHNLDQI 371
Query: 223 SWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDG 282
SWN M++G K G VE AR LF+ +P KD+VSW +I GY Q + SE L ++ M
Sbjct: 372 SWNSMISGCMKCGSVEKARALFDVMPEKDIVSWSAVISGYAQHDCFSETLALFHEMQLGQ 431
Query: 283 IAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLAR 342
I P++ ++V +ISAC A +G +H+ I K G + T++ Y CG + A
Sbjct: 432 IRPDETILVSVISACTHLAALDQGKWVHAYIRKNGLKVNVILGTTLLDMYMKCGCVENAL 491
Query: 343 LQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNM 402
F + ++SWNALI G NG++E
Sbjct: 492 EVFNGMEEKGVSSWNALIIGLAVNGLVER------------------------------- 520
Query: 403 ALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVL-NNSITLNDNLSAAII 461
+L++F M + GV PNEIT + V A G + EGR ++ + I N ++
Sbjct: 521 SLDMFSEMKNNGVIPNEITFMGVLGACRHMGLVDEGRCHFASMIEKHGIEPNVKHYGCMV 580
Query: 462 DMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKI 509
D+ + G +N A E V+ W A++ HGD + ++
Sbjct: 581 DLLGRAGLLNEA-EKLIESMPMAPDVATWGALLGACKKHGDTEMGERV 627
>gi|449487256|ref|XP_004157540.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 213/626 (34%), Positives = 355/626 (56%), Gaps = 4/626 (0%)
Query: 42 GQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIR 101
G+ +H I K GL ++ N+L+ YAK G + A +FD + N +ISGY +
Sbjct: 29 GRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMPLKSTFSWNTLISGYAK 88
Query: 102 NDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASV 161
+R + + P VS+T++I+G+ Q + A+ +F M V P++ T+++V
Sbjct: 89 QGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAKMISERVPPSQFTVSNV 148
Query: 162 ISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNI 221
+SS + R +H V+KL + V ++T+LLNMY C V A+ +FD M +NI
Sbjct: 149 LSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPVIAKVVFDRMTVKNI 208
Query: 222 VSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCD 281
+WN +++ + ++G ELA FE++P +D+VSW +MI GY Q EAL ++ ML +
Sbjct: 209 STWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEALAIFSKMLNE 268
Query: 282 -GIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINL 340
+ P++ + ++SAC G QIH+ I++A + + +I YA G + +
Sbjct: 269 PSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGNALISMYAKSGGVEI 328
Query: 341 ARLQFELGIKDH--IASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNE 398
ARL E + I ++ +L+ G+ + G ++ AR++FN ++ RDV +W+AMI GY QN
Sbjct: 329 ARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQNG 388
Query: 399 QPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSA 458
N ALELF MV+ G +PN T+ ++ +S L+ G+ H + + +++
Sbjct: 389 LWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPSVTN 448
Query: 459 AIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNI 518
A+I MYAK G+IN A VF + + + W ++I LA HG + ++ + +
Sbjct: 449 ALIAMYAKTGNINVAKRVF-DLPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLSVGM 507
Query: 519 KLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAE 578
K + IT++GVLS C H GLV+ G +Y+ M V+ +EP L HY CM+DL GRAG L++A
Sbjct: 508 KPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQEAY 567
Query: 579 EVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAG 638
I SMP++ D + WG+LLA+ +IH N ++ + AA+ L + P + + + L+N+Y+ G
Sbjct: 568 LFIESMPIEPDNIAWGSLLASCKIHKNADLAKVAAERLLLIDPGNSGAYLALANVYSACG 627
Query: 639 RWEDAFSIRKEMRDCGMKRLPGFSGV 664
+WE+A RK M+D G+++ G S +
Sbjct: 628 KWENAAQTRKLMKDRGVRKEKGISWI 653
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 136/505 (26%), Positives = 242/505 (47%), Gaps = 45/505 (8%)
Query: 158 LASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMK 217
A ++ +SV + + R +H +IK + V + NL+ Y SL A +FDEM
Sbjct: 13 FAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMP 72
Query: 218 ERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRA 277
++ SWN +++G+AK G E++R L +P D VSW +I GY Q A+ M+
Sbjct: 73 LKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAK 132
Query: 278 MLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGR 337
M+ + + P+ + +++S+C G +IHS +VK G + ++++ YA CG
Sbjct: 133 MISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGD 192
Query: 338 INLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQN 397
+A++ F+ +I++WNALI+ ++++G E A F M RD+ SW++MISGY+Q
Sbjct: 193 PVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQ 252
Query: 398 EQPNMALELFHGMV-DAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVL---------- 446
AL +F M+ + +KP+ T+ S+ A A+ L G+ H Y+L
Sbjct: 253 GYNLEALAIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAV 312
Query: 447 -----------------------NNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDR 483
N + LN +++D Y K G++ A E+F +RDR
Sbjct: 313 GNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDR 372
Query: 484 TTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGER 543
V W A+I G +G N L+++ + + NS T +LS +++ G++
Sbjct: 373 --DVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQ 430
Query: 544 YFKS-MKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRI 602
S +K+ + P + + ++ + + G + A+ V K ++V W +++ A
Sbjct: 431 IHASAIKAGESSTPSVTN--ALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQ 488
Query: 603 HG----NVEVGERAAKSLAGLQPSH 623
HG + + ER G++P H
Sbjct: 489 HGLGKEAINLFERMLS--VGMKPDH 511
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 133/489 (27%), Positives = 241/489 (49%), Gaps = 39/489 (7%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
+ + + L C+A+ + G++IHS + K GL S + SL+N+YAKCG AK +FD
Sbjct: 142 QFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPVIAKVVFD 201
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+ + N +IS Y+++ + A F+K P + VS+ SMI G++Q EAL +
Sbjct: 202 RMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEALAI 261
Query: 143 FRDM-RILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYC 201
F M + P+ TLAS++S+ +L + + +H +++ + + L++MY
Sbjct: 262 FSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGNALISMYA 321
Query: 202 VCSSLVEARSLFDEMKER--NIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMI 259
+ AR + + + NI+++ +L+G+ K G V+ ARE+F ++ +DVV+W MI
Sbjct: 322 KSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMI 381
Query: 260 DGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFD 319
GY+Q ++AL ++R M+ +G PN + ++S G QIH+ +KAG
Sbjct: 382 VGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGES 441
Query: 320 CYDFIQATIIHFYAACGRINLARLQFEL-GIKDHIASWNALIAGFIRNGMIEDARQLFNN 378
+ +I YA G IN+A+ F+L K I SW ++I ++G+ ++
Sbjct: 442 STPSVTNALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQHGLGKE------- 494
Query: 379 MQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG 438
A+ LF M+ G+KP+ IT V V A G +++G
Sbjct: 495 ------------------------AINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQG 530
Query: 439 RWAHEYVLNNSITLNDNLS--AAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICG 496
R + ++ + LS A +ID+Y + G + A+ + +++ W +++
Sbjct: 531 R-KYYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQEAYLFIESMPIEPDNIA-WGSLLAS 588
Query: 497 LAMHGDANL 505
+H +A+L
Sbjct: 589 CKIHKNADL 597
>gi|449449306|ref|XP_004142406.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 213/626 (34%), Positives = 355/626 (56%), Gaps = 4/626 (0%)
Query: 42 GQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIR 101
G+ +H I K GL ++ N+L+ YAK G + A +FD + N +ISGY +
Sbjct: 29 GRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMPLKSTFSWNTLISGYAK 88
Query: 102 NDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASV 161
+R + + P VS+T++I+G+ Q + A+ +F M V P++ T+++V
Sbjct: 89 QGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAKMISERVPPSQFTVSNV 148
Query: 162 ISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNI 221
+SS + R +H V+KL + V ++T+LLNMY C V A+ +FD M +NI
Sbjct: 149 LSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPVIAKVVFDRMTVKNI 208
Query: 222 VSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCD 281
+WN +++ + ++G ELA FE++P +D+VSW +MI GY Q EAL ++ ML +
Sbjct: 209 STWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEALVIFSKMLNE 268
Query: 282 -GIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINL 340
+ P++ + ++SAC G QIH+ I++A + + +I YA G + +
Sbjct: 269 PSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGNALISMYAKSGGVEI 328
Query: 341 ARLQFELGIKDH--IASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNE 398
ARL E + I ++ +L+ G+ + G ++ AR++FN ++ RDV +W+AMI GY QN
Sbjct: 329 ARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQNG 388
Query: 399 QPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSA 458
N ALELF MV+ G +PN T+ ++ +S L+ G+ H + + +++
Sbjct: 389 LWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPSVTN 448
Query: 459 AIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNI 518
A+I MYAK G+IN A VF + + + W ++I LA HG + ++ + +
Sbjct: 449 ALIAMYAKTGNINVAKRVF-DLPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLSVGM 507
Query: 519 KLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAE 578
K + IT++GVLS C H GLV+ G +Y+ M V+ +EP L HY CM+DL GRAG L++A
Sbjct: 508 KPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQEAY 567
Query: 579 EVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAG 638
I SMP++ D + WG+LLA+ +IH N ++ + AA+ L + P + + + L+N+Y+ G
Sbjct: 568 LFIESMPIEPDNIAWGSLLASCKIHKNADLAKVAAERLLLIDPGNSGAYLALANVYSACG 627
Query: 639 RWEDAFSIRKEMRDCGMKRLPGFSGV 664
+WE+A RK M+D G+++ G S +
Sbjct: 628 KWENAAQTRKLMKDRGVRKEKGISWI 653
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 136/505 (26%), Positives = 242/505 (47%), Gaps = 45/505 (8%)
Query: 158 LASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMK 217
A ++ +SV + + R +H +IK + V + NL+ Y SL A +FDEM
Sbjct: 13 FAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMP 72
Query: 218 ERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRA 277
++ SWN +++G+AK G E++R L +P D VSW +I GY Q A+ M+
Sbjct: 73 LKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAK 132
Query: 278 MLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGR 337
M+ + + P+ + +++S+C G +IHS +VK G + ++++ YA CG
Sbjct: 133 MISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGD 192
Query: 338 INLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQN 397
+A++ F+ +I++WNALI+ ++++G E A F M RD+ SW++MISGY+Q
Sbjct: 193 PVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQ 252
Query: 398 EQPNMALELFHGMV-DAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVL---------- 446
AL +F M+ + +KP+ T+ S+ A A+ L G+ H Y+L
Sbjct: 253 GYNLEALVIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAV 312
Query: 447 -----------------------NNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDR 483
N + LN +++D Y K G++ A E+F +RDR
Sbjct: 313 GNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDR 372
Query: 484 TTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGER 543
V W A+I G +G N L+++ + + NS T +LS +++ G++
Sbjct: 373 --DVVAWTAMIVGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQ 430
Query: 544 YFKS-MKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRI 602
S +K+ + P + + ++ + + G + A+ V K ++V W +++ A
Sbjct: 431 IHASAIKAGESSTPSVTN--ALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQ 488
Query: 603 HG----NVEVGERAAKSLAGLQPSH 623
HG + + ER G++P H
Sbjct: 489 HGLGKEAINLFERMLS--VGMKPDH 511
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 133/489 (27%), Positives = 241/489 (49%), Gaps = 39/489 (7%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
+ + + L C+A+ + G++IHS + K GL S + SL+N+YAKCG AK +FD
Sbjct: 142 QFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPVIAKVVFD 201
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+ + N +IS Y+++ + A F+K P + VS+ SMI G++Q EAL +
Sbjct: 202 RMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEALVI 261
Query: 143 FRDM-RILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYC 201
F M + P+ TLAS++S+ +L + + +H +++ + + L++MY
Sbjct: 262 FSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGNALISMYA 321
Query: 202 VCSSLVEARSLFDEMKER--NIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMI 259
+ AR + + + NI+++ +L+G+ K G V+ ARE+F ++ +DVV+W MI
Sbjct: 322 KSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMI 381
Query: 260 DGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFD 319
GY+Q ++AL ++R M+ +G PN + ++S G QIH+ +KAG
Sbjct: 382 VGYVQNGLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGES 441
Query: 320 CYDFIQATIIHFYAACGRINLARLQFEL-GIKDHIASWNALIAGFIRNGMIEDARQLFNN 378
+ +I YA G IN+A+ F+L K I SW ++I ++G+ ++
Sbjct: 442 STPSVTNALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQHGLGKE------- 494
Query: 379 MQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG 438
A+ LF M+ G+KP+ IT V V A G +++G
Sbjct: 495 ------------------------AINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQG 530
Query: 439 RWAHEYVLNNSITLNDNLS--AAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICG 496
R + ++ + LS A +ID+Y + G + A+ + +++ W +++
Sbjct: 531 R-KYYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQEAYLFIESMPIEPDNIA-WGSLLAS 588
Query: 497 LAMHGDANL 505
+H +A+L
Sbjct: 589 CKIHKNADL 597
>gi|449485565|ref|XP_004157209.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 953
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/522 (38%), Positives = 310/522 (59%), Gaps = 33/522 (6%)
Query: 172 WECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGF 231
WE + +H V+KL D V + L+N + VCS++ +A +F+E + VSWN +L G+
Sbjct: 230 WEAKQVHNHVLKLGFDSDVYVRNTLINCFSVCSNMTDACRVFNESSVLDSVSWNSILAGY 289
Query: 232 AKAGLVELARELFERIPS-------------------------------KDVVSWGTMID 260
+ G VE A+ ++ ++P KD+V+W +I
Sbjct: 290 IEIGNVEEAKHIYHQMPERSIIASNSMIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIA 349
Query: 261 GYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDC 320
+ Q E EA+ + M G+ ++V+ V +SAC + G IHS+ +K G +
Sbjct: 350 CFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACANLLVVNMGKLIHSLSLKIGTES 409
Query: 321 YDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ 380
Y +Q +I+ Y+ CG I +AR F+ + SWN++I+G+++ ++++A+ +F++M
Sbjct: 410 YINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMP 469
Query: 381 KRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRW 440
++DV SWS+MISGYAQN+ + L LF M +G KP+E T+VSV A A L++G+W
Sbjct: 470 EKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQGKW 529
Query: 441 AHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMH 500
H Y+ N +T+N L +IDMY KCG + TA EVFY + ++ +S WNA+I GLAM+
Sbjct: 530 VHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMIEK--GISTWNALILGLAMN 587
Query: 501 GDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKH 560
G +L ++S+++K ++ N ITF+GVL C H GLVD G+ +F SM + ++P++KH
Sbjct: 588 GLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMGLVDEGQHHFYSMIHDHKIQPNVKH 647
Query: 561 YGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQ 620
YGCMVDLLGRAG+L++AEE++ MPM DV WG LL A + HG+ E+G R + L LQ
Sbjct: 648 YGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGALLGACKKHGDSEMGRRVGRKLIELQ 707
Query: 621 PSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
P H VLLSNIYA G+W+D IR M + ++PG S
Sbjct: 708 PDHDGFHVLLSNIYASKGKWDDVLEIRGMMTKHRVLKIPGCS 749
Score = 238 bits (607), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 147/540 (27%), Positives = 265/540 (49%), Gaps = 72/540 (13%)
Query: 7 HSVFNSQKANLQN----SDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQN 62
H F K+ L N +Y L+ ++ CS + + +Q+H+ + K G +S+ +++N
Sbjct: 195 HFAFTLYKSMLSNYLGADNYTYPLL--IQACSIRRSEWEAKQVHNHVLKLGFDSDVYVRN 252
Query: 63 SLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTP------ 116
+LIN ++ C ++ A +F+ S LD V+ N +++GYI + +A+ ++ + P
Sbjct: 253 TLINCFSVCSNMTDACRVFNESSVLDSVSWNSILAGYIEIGNVEEAKHIYHQMPERSIIA 312
Query: 117 --------------IKCC-----------VSYTSMIMGFAQNDCWREALEVFRDMRILGV 151
++ C V+++++I F QN+ + EA+ F M +GV
Sbjct: 313 SNSMIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGV 372
Query: 152 IPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARS 211
+ +EV S +S+ +L + +++H L +K+ + ++ + L+ MY C ++ AR
Sbjct: 373 MVDEVVAVSALSACANLLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARK 432
Query: 212 LFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEA 271
LFDE +++SWN M++G+ K LV+ A+ +F+ +P KDVVSW +MI GY Q + E
Sbjct: 433 LFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDET 492
Query: 272 LTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHF 331
L +++ M G P++ +V +ISAC R A +G +H+ I + G + T+I
Sbjct: 493 LALFQEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDM 552
Query: 332 YAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMI 391
Y CG + A F I+ I++WNALI G NG++E + +F+NM+K
Sbjct: 553 YMKCGCVETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKK---------- 602
Query: 392 SGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVL--NNS 449
V PNEIT + V A G + EG+ H Y + ++
Sbjct: 603 ---------------------CHVTPNEITFMGVLGACRHMGLVDEGQ-HHFYSMIHDHK 640
Query: 450 ITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKI 509
I N ++D+ + G + A E+ + T V+ W A++ HGD+ + ++
Sbjct: 641 IQPNVKHYGCMVDLLGRAGKLQEAEELLNRM-PMTPDVATWGALLGACKKHGDSEMGRRV 699
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 101/411 (24%), Positives = 181/411 (44%), Gaps = 70/411 (17%)
Query: 261 GYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDC 320
Y+Q A T+Y++ML + + ++ LI AC + E Q+H+ ++K GFD
Sbjct: 187 AYIQTNSPHFAFTLYKSMLSNYLGADNYTYPLLIQACSIRRSEWEAKQVHNHVLKLGFDS 246
Query: 321 YDFIQATIIHFYAACGRINLA-RLQFELGIKDHIASWNALIAGFIRNGMIEDAR------ 373
+++ T+I+ ++ C + A R+ E + D + SWN+++AG+I G +E+A+
Sbjct: 247 DVYVRNTLINCFSVCSNMTDACRVFNESSVLDSV-SWNSILAGYIEIGNVEEAKHIYHQM 305
Query: 374 -------------------------QLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFH 408
+LF+ M ++D+ +WSA+I+ + QNE A+ F
Sbjct: 306 PERSIIASNSMIVLFGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFV 365
Query: 409 GMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCG 468
GM GV +E+ VS A A+ + G+ H L NL A+I MY+KCG
Sbjct: 366 GMHKIGVMVDEVVAVSALSACANLLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCG 425
Query: 469 SINTAFEVF--YHIRDRTT---------------------------SVSPWNAIICGLAM 499
I A ++F ++ D + V W+++I G A
Sbjct: 426 DIMVARKLFDEAYLLDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQ 485
Query: 500 HGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGE---RYFKSMKSVYNVEP 556
+ + TL ++ +++ K + T + V+S C ++ G+ Y K NV
Sbjct: 486 NDLFDETLALFQEMQMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVIL 545
Query: 557 DLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVE 607
++D+ + G +E A EV M ++ + W L+ ++G VE
Sbjct: 546 G----TTLIDMYMKCGCVETALEVFYGM-IEKGISTWNALILGLAMNGLVE 591
>gi|148909481|gb|ABR17838.1| unknown [Picea sitchensis]
Length = 795
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 216/642 (33%), Positives = 335/642 (52%), Gaps = 95/642 (14%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
+L +S ++ C + + G+++H I G ES+ + +L ++Y KCG
Sbjct: 120 KLVFLSVIKACGSQSDLQAGRKVHEDIIARGFESDVIVGTALASMYTKCG---------- 169
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
L +AR+VFD+ P + VS+ ++I G++QN EAL +
Sbjct: 170 ---------------------SLENARQVFDRMPKRDVVSWNAIIAGYSQNGQPYEALAL 208
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
F +M++ G+ PN TL SV+ HL + + + +H I+ I+ V++ L+NMY
Sbjct: 209 FSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVNGLVNMY-- 266
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
AK G V A +LFER+P +DV SW +I GY
Sbjct: 267 -----------------------------AKCGNVNTAHKLFERMPIRDVASWNAIIGGY 297
Query: 263 LQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD 322
+ EAL + M GI PN + +V ++ AC A +G QIH +++GF+ D
Sbjct: 298 SLNSQHHEALAFFNRMQVRGIKPNSITMVSVLPACAHLFALEQGQQIHGYAIRSGFESND 357
Query: 323 FIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKR 382
+ +++ YA CG +N A +LF M K+
Sbjct: 358 VVGNALVNMYAKCGNVN-------------------------------SAYKLFERMPKK 386
Query: 383 DVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAH 442
+V +W+A+ISGY+Q+ P+ AL LF M G+KP+ +VSV A A L++G+ H
Sbjct: 387 NVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVLPACAHFLALEQGKQIH 446
Query: 443 EYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGD 502
Y + + N + ++D+YAKCG++NTA ++F + ++ V W +I +HG
Sbjct: 447 GYTIRSGFESNVVVGTGLVDIYAKCGNVNTAQKLFERMPEQ--DVVSWTTMILAYGIHGH 504
Query: 503 ANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYG 562
L ++S +++ KL+ I F +L+ C HAGLVD G +YF+ MKS Y + P L+HY
Sbjct: 505 GEDALALFSKMQETGTKLDHIAFTAILTACSHAGLVDQGLQYFQCMKSDYGLAPKLEHYA 564
Query: 563 CMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPS 622
C+VDLLGRAG L++A +I++M ++ D +WG LL A RIH N+E+GE+AAK L L P
Sbjct: 565 CLVDLLGRAGHLDEANGIIKNMSLEPDANVWGALLGACRIHCNIELGEQAAKHLFELDPD 624
Query: 623 HGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
+ VLLSNIYA+A RWED +RK M++ G+K+ PG S V
Sbjct: 625 NAGYYVLLSNIYAEAQRWEDVAKLRKMMKEKGVKKQPGCSVV 666
Score = 236 bits (602), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 151/534 (28%), Positives = 263/534 (49%), Gaps = 82/534 (15%)
Query: 100 IRNDRLNDAREV--------FDKTPIKC-CVSYTSMIMGFAQNDCWREALEVFRDMRILG 150
+R +++ REV F +T I+ V + I+G+ +N W +AL ++ M+ G
Sbjct: 56 LRRNKVKTTREVSACANQTQFTQTDIRNNAVVWKETIIGYVKNGFWNKALRLYYQMQRTG 115
Query: 151 VIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEAR 210
+ P+++ SVI + + R +H +I + VI+ T L +MY C SL AR
Sbjct: 116 INPDKLVFLSVIKACGSQSDLQAGRKVHEDIIARGFESDVIVGTALASMYTKCGSLENAR 175
Query: 211 SLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSE 270
+FD M +R++VSWN ++ G+++ G + E
Sbjct: 176 QVFDRMPKRDVVSWNAIIAGYSQNG-------------------------------QPYE 204
Query: 271 ALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIH 330
AL ++ M +GI PN +V ++ C +A +G QIH +++G + + +++
Sbjct: 205 ALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESDVLVVNGLVN 264
Query: 331 FYAACGRINLARLQFE-LGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSA 389
YA CG +N A FE + I+D +ASWNA+I G+ N +A FN MQ R
Sbjct: 265 MYAKCGNVNTAHKLFERMPIRD-VASWNAIIGGYSLNSQHHEALAFFNRMQVR------- 316
Query: 390 MISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNS 449
G+KPN ITMVSV A A L++G+ H Y + +
Sbjct: 317 ------------------------GIKPNSITMVSVLPACAHLFALEQGQQIHGYAIRSG 352
Query: 450 ITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKI 509
ND + A+++MYAKCG++N+A+++F + + +V WNAII G + HG + L +
Sbjct: 353 FESNDVVGNALVNMYAKCGNVNSAYKLFERMPKK--NVVAWNAIISGYSQHGHPHEALAL 410
Query: 510 YSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGER-YFKSMKSVYNVEPDLKHYGCMVDLL 568
+ +++ + IK +S + VL C H ++ G++ + +++S + E ++ +VD+
Sbjct: 411 FIEMQAQGIKPDSFAIVSVLPACAHFLALEQGKQIHGYTIRSGF--ESNVVVGTGLVDIY 468
Query: 569 GRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPS 622
+ G + A+++ MP + DVV W T++ A IHG+ GE A + +Q +
Sbjct: 469 AKCGNVNTAQKLFERMP-EQDVVSWTTMILAYGIHGH---GEDALALFSKMQET 518
>gi|356569774|ref|XP_003553071.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 775
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 220/526 (41%), Positives = 303/526 (57%), Gaps = 38/526 (7%)
Query: 172 WECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGF 231
+E R LH + DG V + L+N+Y VC S+ AR +F+E ++VSWN +L G+
Sbjct: 122 FEGRQLHAHAVSSGFDGDVYVRNTLMNLYAVCGSVGSARRVFEESPVLDLVSWNTLLAGY 181
Query: 232 AKAGLVELARELFERIPSK---------------------------------DVVSWGTM 258
+AG VE A +FE +P + D+VSW M
Sbjct: 182 VQAGEVEEAERVFEGMPERNTIASNSMIALFGRKGCVEKARRIFNGVRGRERDMVSWSAM 241
Query: 259 IDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGF 318
+ Y Q E EAL ++ M G+A ++V++V +SAC R + G +H + VK G
Sbjct: 242 VSCYEQNEMGEEALVLFVEMKGSGVAVDEVVVVSALSACSRVLNVEMGRWVHGLAVKVGV 301
Query: 319 DCYDFIQATIIHFYAACGRINLARLQFELG--IKDHIASWNALIAGFIRNGMIEDARQLF 376
+ Y ++ +IH Y++CG I AR F+ G + D I SWN++I+G++R G I+DA LF
Sbjct: 302 EDYVSLKNALIHLYSSCGEIVDARRIFDDGGELLDLI-SWNSMISGYLRCGSIQDAEMLF 360
Query: 377 NNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLK 436
+M ++DV SWSAMISGYAQ+E + AL LF M GV+P+E +VS A TL
Sbjct: 361 YSMPEKDVVSWSAMISGYAQHECFSEALALFQEMQLHGVRPDETALVSAISACTHLATLD 420
Query: 437 EGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICG 496
G+W H Y+ N + +N LS +IDMY KCG + A EVFY + ++ VS WNA+I G
Sbjct: 421 LGKWIHAYISRNKLQVNVILSTTLIDMYMKCGCVENALEVFYAMEEK--GVSTWNAVILG 478
Query: 497 LAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEP 556
LAM+G +L +++D++K N ITF+GVL C H GLV+ G YF SM + +E
Sbjct: 479 LAMNGSVEQSLNMFADMKKTGTVPNEITFMGVLGACRHMGLVNDGRHYFNSMIHEHKIEA 538
Query: 557 DLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSL 616
++KHYGCMVDLLGRAG L++AEE+I SMPM DV WG LL A R H + E+GER + L
Sbjct: 539 NIKHYGCMVDLLGRAGLLKEAEELIDSMPMAPDVATWGALLGACRKHRDNEMGERLGRKL 598
Query: 617 AGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
LQP H VLLSNIYA G W + IR M G+ + PG S
Sbjct: 599 IQLQPDHDGFHVLLSNIYASKGNWGNVLEIRGIMAQHGVVKTPGCS 644
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 139/508 (27%), Positives = 245/508 (48%), Gaps = 67/508 (13%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
L+ C+A ++ +G+Q+H+ SG + + +++N+L+NLYA CG + A+ +F+ LD
Sbjct: 112 LQCCAARVSEFEGRQLHAHAVSSGFDGDVYVRNTLMNLYAVCGSVGSARRVFEESPVLDL 171
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTP---------------IKCC-------------- 120
V+ N +++GY++ + +A VF+ P K C
Sbjct: 172 VSWNTLLAGYVQAGEVEEAERVFEGMPERNTIASNSMIALFGRKGCVEKARRIFNGVRGR 231
Query: 121 ----VSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRM 176
VS+++M+ + QN+ EAL +F +M+ GV +EV + S +S+ + + R
Sbjct: 232 ERDMVSWSAMVSCYEQNEMGEEALVLFVEMKGSGVAVDEVVVVSALSACSRVLNVEMGRW 291
Query: 177 LHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKE-RNIVSWNVMLNGFAKAG 235
+HGL +K+ ++ +V + L+++Y C +V+AR +FD+ E +++SWN M++G+ + G
Sbjct: 292 VHGLAVKVGVEDYVSLKNALIHLYSSCGEIVDARRIFDDGGELLDLISWNSMISGYLRCG 351
Query: 236 LVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLIS 295
++ A LF +P KDVVSW MI GY Q E SEAL +++ M G+ P++ +V IS
Sbjct: 352 SIQDAEMLFYSMPEKDVVSWSAMISGYAQHECFSEALALFQEMQLHGVRPDETALVSAIS 411
Query: 296 ACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIAS 355
AC G IH+ I + + T+I Y CG + A F + +++
Sbjct: 412 ACTHLATLDLGKWIHAYISRNKLQVNVILSTTLIDMYMKCGCVENALEVFYAMEEKGVST 471
Query: 356 WNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGV 415
WNA+I G NG +E + +F +M+K G
Sbjct: 472 WNAVILGLAMNGSVEQSLNMFADMKK-------------------------------TGT 500
Query: 416 KPNEITMVSVFCAIASSGTLKEGR-WAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAF 474
PNEIT + V A G + +GR + + + + I N ++D+ + G + A
Sbjct: 501 VPNEITFMGVLGACRHMGLVNDGRHYFNSMIHEHKIEANIKHYGCMVDLLGRAGLLKEAE 560
Query: 475 EVFYHIRDRTTSVSPWNAIICGLAMHGD 502
E+ + V+ W A++ H D
Sbjct: 561 ELIDSM-PMAPDVATWGALLGACRKHRD 587
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 107/381 (28%), Positives = 184/381 (48%), Gaps = 63/381 (16%)
Query: 28 SALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTL 87
SAL CS + V G+ +H L K G+E ++N+LI+LY+ CG I A+ +FD L
Sbjct: 275 SALSACSRVLNVEMGRWVHGLAVKVGVEDYVSLKNALIHLYSSCGEIVDARRIFDDGGEL 334
Query: 88 -DPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDM 146
D ++ N MISGY+R + DA +F P K VS+++MI G+AQ++C+ EAL +F++M
Sbjct: 335 LDLISWNSMISGYLRCGSIQDAEMLFYSMPEKDVVSWSAMISGYAQHECFSEALALFQEM 394
Query: 147 RILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSL 206
++ GV P+E L S IS+ HL + + +H + + + VI+ST L++MY C +
Sbjct: 395 QLHGVRPDETALVSAISACTHLATLDLGKWIHAYISRNKLQVNVILSTTLIDMYMKCGCV 454
Query: 207 VEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVE 266
A +F M+E+ + +WN ++ G A G VE
Sbjct: 455 ENALEVFYAMEEKGVSTWNAVILGLAMNGSVE---------------------------- 486
Query: 267 RLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQA 326
++L M+ M G PN++ + ++ AC H +V G ++
Sbjct: 487 ---QSLNMFADMKKTGTVPNEITFMGVLGACR-----------HMGLVNDGRHYFN---- 528
Query: 327 TIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ-KRDVY 385
++IH E I+ +I + ++ R G++++A +L ++M DV
Sbjct: 529 SMIH---------------EHKIEANIKHYGCMVDLLGRAGLLKEAEELIDSMPMAPDVA 573
Query: 386 SWSAMISGYAQNEQPNMALEL 406
+W A++ ++ M L
Sbjct: 574 TWGALLGACRKHRDNEMGERL 594
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 107/431 (24%), Positives = 196/431 (45%), Gaps = 70/431 (16%)
Query: 243 LFERIPSKDVVSWGTMIDGYLQVERLS-EALTMYRAMLCDGIAPNDVMIVDLISACGRAM 301
+F + + + +W T++ +L ++ +AL Y+ L P+ L+ C +
Sbjct: 60 IFNHLRNPNTFTWNTIMRAHLYLQNSPHQALLHYKLFLASHAKPDSYTYPILLQCCAARV 119
Query: 302 AFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIA 361
+ EG Q+H+ V +GFD +++ T+++ YA CG + AR FE + SWN L+A
Sbjct: 120 SEFEGRQLHAHAVSSGFDGDVYVRNTLMNLYAVCGSVGSARRVFEESPVLDLVSWNTLLA 179
Query: 362 GFI-------------------------------RNGMIEDARQLFNNM--QKRDVYSWS 388
G++ R G +E AR++FN + ++RD+ SWS
Sbjct: 180 GYVQAGEVEEAERVFEGMPERNTIASNSMIALFGRKGCVEKARRIFNGVRGRERDMVSWS 239
Query: 389 AMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNN 448
AM+S Y QNE AL LF M +GV +E+ +VS A + ++ GRW H +
Sbjct: 240 AMVSCYEQNEMGEEALVLFVEMKGSGVAVDEVVVVSALSACSRVLNVEMGRWVHGLAVKV 299
Query: 449 SITLNDNLSAAIIDMYA--------------------------------KCGSINTAFEV 476
+ +L A+I +Y+ +CGSI A +
Sbjct: 300 GVEDYVSLKNALIHLYSSCGEIVDARRIFDDGGELLDLISWNSMISGYLRCGSIQDAEML 359
Query: 477 FYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAG 536
FY + ++ V W+A+I G A H + L ++ +++ ++ + + +S C H
Sbjct: 360 FYSMPEK--DVVSWSAMISGYAQHECFSEALALFQEMQLHGVRPDETALVSAISACTHLA 417
Query: 537 LVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTL 596
+DLG ++ + S ++ ++ ++D+ + G +E+A EV +M K V W +
Sbjct: 418 TLDLG-KWIHAYISRNKLQVNVILSTTLIDMYMKCGCVENALEVFYAMEEKG-VSTWNAV 475
Query: 597 LAASRIHGNVE 607
+ ++G+VE
Sbjct: 476 ILGLAMNGSVE 486
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/194 (20%), Positives = 89/194 (45%), Gaps = 12/194 (6%)
Query: 374 QLFNNMQKRDVYSWSAMISG--YAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIAS 431
++FN+++ + ++W+ ++ Y QN P+ AL + + + KP+ T + A+
Sbjct: 59 RIFNHLRNPNTFTWNTIMRAHLYLQN-SPHQALLHYKLFLASHAKPDSYTYPILLQCCAA 117
Query: 432 SGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWN 491
+ EGR H + +++ + + ++++YA CGS+ +A VF + WN
Sbjct: 118 RVSEFEGRQLHAHAVSSGFDGDVYVRNTLMNLYAVCGSVGSARRVFE--ESPVLDLVSWN 175
Query: 492 AIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSV 551
++ G G+ +++ + +R N+I +++ G V+ R F ++
Sbjct: 176 TLLAGYVQAGEVEEAERVFEGMPER----NTIASNSMIALFGRKGCVEKARRIFNGVR-- 229
Query: 552 YNVEPDLKHYGCMV 565
E D+ + MV
Sbjct: 230 -GRERDMVSWSAMV 242
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 66/169 (39%), Gaps = 17/169 (10%)
Query: 456 LSAAIIDMYAKCGSIN------------TAFEVFYHIRDRTTSVSPWNAII-CGLAMHGD 502
L+ I D YA IN + +F H+R+ T WN I+ L +
Sbjct: 28 LTGLITDPYAASRLINFSSHSTTLVPFHYSLRIFNHLRNPNTFT--WNTIMRAHLYLQNS 85
Query: 503 ANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYG 562
+ L Y + K +S T+ +L CC A + + R + + D+
Sbjct: 86 PHQALLHYKLFLASHAKPDSYTY-PILLQCCAARVSEFEGRQLHAHAVSSGFDGDVYVRN 144
Query: 563 CMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGER 611
+++L G + A V P+ D+V W TLLA G VE ER
Sbjct: 145 TLMNLYAVCGSVGSARRVFEESPV-LDLVSWNTLLAGYVQAGEVEEAER 192
>gi|414873128|tpg|DAA51685.1| TPA: hypothetical protein ZEAMMB73_445170 [Zea mays]
Length = 987
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 221/642 (34%), Positives = 360/642 (56%), Gaps = 10/642 (1%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGL----ISQAKSMFDSC- 84
L+ C + S G+ IH+ K+GL +T++ N+L+ YA G+ +A+ +FD
Sbjct: 216 LQLCRTAVNPSAGRAIHAHAVKAGLLVSTYLCNNLLAYYASVGVSRGCFREARCLFDDIP 275
Query: 85 -STLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
+ + N ++S Y ++ RL DA VF + P + VS+T MI+G ++ + +A++ F
Sbjct: 276 YARRNAFTWNSLLSLYAKSGRLPDAHVVFAEMPDRDAVSWTIMIVGLNRSGRFWDAVKTF 335
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
DM G P++ TL +V+SS + R +H V+KL + V ++ ++L MY C
Sbjct: 336 LDMVSEGFAPSQFTLTNVLSSCAAMEACGVGRKVHPFVVKLGLSSCVPVANSVLYMYGKC 395
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYL 263
AR++F+ M+ R++ SWNVM++ + G +ELA +FE + + +VSW T+I GY
Sbjct: 396 GDAETARAVFERMQVRSVSSWNVMVSLYTHQGRMELAVSMFENMVERSIVSWNTIIAGYN 455
Query: 264 QVERLSEALTMYRAML-CDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD 322
Q AL + ML + P+ + ++SAC G Q+HS I++ G C
Sbjct: 456 QNGLDGMALKFFSRMLSASSMEPDAFTVTSVLSACANLRMLKMGKQMHSYILRTGMPCSS 515
Query: 323 FIQATIIHFYAACGRINLARLQFELGIKD--HIASWNALIAGFIRNGMIEDARQLFNNMQ 380
I +I YA G + AR + + ++ S+ AL+ G+++ G + AR++F+ M
Sbjct: 516 QIMNALISTYAKSGSVETARRIMDQAVVADLNVISFTALLEGYVKLGDTKQAREIFDIMN 575
Query: 381 KRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRW 440
RDV +W+AMI GY QN Q + A+ELF M+ G +PN T+ +V A AS L G+
Sbjct: 576 NRDVIAWTAMIVGYHQNGQNDEAMELFRSMILIGPEPNSHTLAAVLSACASLAYLDYGKQ 635
Query: 441 AHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMH 500
H + + + ++S AII +YA+ GS+ A VF I R +++ W ++I +A H
Sbjct: 636 IHCKAIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETIT-WTSMIVAMAQH 694
Query: 501 GDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKH 560
G + ++ ++ + +K + IT++GVLS C HAG VD G+RY++ M++ + + P + H
Sbjct: 695 GLGEQAVVLFEEMVRVGVKPDHITYVGVLSACAHAGFVDKGKRYYEQMQNEHGIVPQMSH 754
Query: 561 YGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQ 620
Y CMVDL RAG L +A E I+ MP+ D V+WG+LLAA R+ N ++ E AA L +
Sbjct: 755 YACMVDLHARAGLLTEAHEFIQRMPVAPDTVVWGSLLAACRVRKNADLAELAAGKLLSID 814
Query: 621 PSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
P + + L+N+Y+ GRW DA I K +D G+K+ GFS
Sbjct: 815 PHNSGAYSALANVYSACGRWNDAARIWKLRKDKGVKKETGFS 856
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 125/488 (25%), Positives = 234/488 (47%), Gaps = 37/488 (7%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
+ L + L C+A A G+++H + K GL S + NS++ +Y KCG A+++F+
Sbjct: 347 QFTLTNVLSSCAAMEACGVGRKVHPFVVKLGLSSCVPVANSVLYMYGKCGDAETARAVFE 406
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+ N+M+S Y R+ A +F+ + VS+ ++I G+ QN AL+
Sbjct: 407 RMQVRSVSSWNVMVSLYTHQGRMELAVSMFENMVERSIVSWNTIIAGYNQNGLDGMALKF 466
Query: 143 F-RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYC 201
F R + + P+ T+ SV+S+ +L + + +H +++ + I L++ Y
Sbjct: 467 FSRMLSASSMEPDAFTVTSVLSACANLRMLKMGKQMHSYILRTGMPCSSQIMNALISTYA 526
Query: 202 VCSSLVEARSLFDE--MKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMI 259
S+ AR + D+ + + N++S+ +L G+ K G + ARE+F+ + ++DV++W MI
Sbjct: 527 KSGSVETARRIMDQAVVADLNVISFTALLEGYVKLGDTKQAREIFDIMNNRDVIAWTAMI 586
Query: 260 DGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFD 319
GY Q + EA+ ++R+M+ G PN + ++SAC G QIH +++ +
Sbjct: 587 VGYHQNGQNDEAMELFRSMILIGPEPNSHTLAAVLSACASLAYLDYGKQIHCKAIRSLQE 646
Query: 320 CYDFIQATIIHFYAACGRINLARLQF-ELGIKDHIASWNALIAGFIRNGMIEDARQLFNN 378
+ II YA G + LAR F ++ + +W ++I ++G+ E
Sbjct: 647 QSVSVSNAIITVYARSGSVPLARRVFDQICWRKETITWTSMIVAMAQHGLGEQ------- 699
Query: 379 MQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG 438
A+ LF MV GVKP+ IT V V A A +G + +G
Sbjct: 700 ------------------------AVVLFEEMVRVGVKPDHITYVGVLSACAHAGFVDKG 735
Query: 439 RWAHEYVLN-NSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGL 497
+ +E + N + I + A ++D++A+ G + A E + +V W +++
Sbjct: 736 KRYYEQMQNEHGIVPQMSHYACMVDLHARAGLLTEAHEFIQRMPVAPDTVV-WGSLLAAC 794
Query: 498 AMHGDANL 505
+ +A+L
Sbjct: 795 RVRKNADL 802
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 135/271 (49%), Gaps = 12/271 (4%)
Query: 293 LISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGR----INLARLQFE-- 346
L+ C A+ G IH+ VKAG ++ ++ +YA+ G AR F+
Sbjct: 215 LLQLCRTAVNPSAGRAIHAHAVKAGLLVSTYLCNNLLAYYASVGVSRGCFREARCLFDDI 274
Query: 347 LGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALEL 406
+ + +WN+L++ + ++G + DA +F M RD SW+ MI G ++ + A++
Sbjct: 275 PYARRNAFTWNSLLSLYAKSGRLPDAHVVFAEMPDRDAVSWTIMIVGLNRSGRFWDAVKT 334
Query: 407 FHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAK 466
F MV G P++ T+ +V + A+ GR H +V+ ++ ++ +++ MY K
Sbjct: 335 FLDMVSEGFAPSQFTLTNVLSSCAAMEACGVGRKVHPFVVKLGLSSCVPVANSVLYMYGK 394
Query: 467 CGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFI 526
CG TA VF ++ R SVS WN ++ G L + ++ ++ +R+I +++
Sbjct: 395 CGDAETARAVFERMQVR--SVSSWNVMVSLYTHQGRMELAVSMFENMVERSI----VSWN 448
Query: 527 GVLSTCCHAGLVDLGERYFKSMKSVYNVEPD 557
+++ GL + ++F M S ++EPD
Sbjct: 449 TIIAGYNQNGLDGMALKFFSRMLSASSMEPD 479
>gi|357113684|ref|XP_003558631.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 802
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 217/643 (33%), Positives = 363/643 (56%), Gaps = 11/643 (1%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGL-----ISQAKSMFDS- 83
L+ C G+ IH+ K+GL ++ ++ N+L++ YA +A+ +FD
Sbjct: 30 LQRCQTAANPGAGRAIHARAVKAGLLASAYLCNNLLSYYAGPAAGGGGGFREARRLFDEI 89
Query: 84 -CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+ + N ++S Y ++ RL DAR VF + P + VS+T M++G + + EA+++
Sbjct: 90 PAAQRNVFTWNSLLSLYAKSGRLADARAVFAEMPERDPVSWTVMVVGLNRVGRFGEAIKM 149
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
F DM G+ P + TL +V+SS R +H V+KL + V ++ ++LNMY
Sbjct: 150 FLDMVTDGLSPTQFTLTNVLSSCAATEARGVGRKVHSFVVKLGLSSCVPVANSVLNMYGK 209
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
C AR++F+ M ER++ SWN M++ A G ++LA LFE +P + +VSW +I GY
Sbjct: 210 CGDAETARAVFERMPERSVSSWNAMVSLDAHLGRMDLALSLFENMPDRTIVSWNAVIAGY 269
Query: 263 LQVERLSEALTMYRAMLC-DGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCY 321
Q ++AL + ML +AP++ I ++SAC G Q+H+ I+++
Sbjct: 270 NQNGLNAKALWFFSRMLSYSTMAPDEFTITSVLSACANLGMVSIGKQVHAYILRSRMPYI 329
Query: 322 DFIQATIIHFYAACGRINLAR--LQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNM 379
+ +I YA G + AR +Q + ++ S+ AL+ G+++ G ++ AR++F+ M
Sbjct: 330 GQVTNALISMYAKSGSVENARGVMQQAVMADLNVISFTALLEGYVKLGDMKHAREMFDVM 389
Query: 380 QKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGR 439
RDV +W+AMI GY QN + A+ELF M+ +G +PN T+ +V AS L+ G+
Sbjct: 390 SNRDVVAWTAMIVGYEQNGHNDEAMELFRLMIRSGPEPNSYTVAAVLSVCASLACLEYGK 449
Query: 440 WAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAM 499
H + + + ++S +I+ MYA+ GS+ A VF + R +V+ W ++I LA
Sbjct: 450 QIHCKAIRSLQEQSSSVSNSIVTMYARSGSLPWARRVFDRVHWRKETVT-WTSMIVALAQ 508
Query: 500 HGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLK 559
HG + ++ ++ + +K + ITF+GVLS C H G VD G+RYF+ ++ + + P++
Sbjct: 509 HGLGEDAVGLFEEMLRVGVKPDRITFVGVLSACTHVGFVDEGKRYFQQLQDKHGIVPEMS 568
Query: 560 HYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGL 619
HY CMVDLL RAG +A+E I+ MP++ D + WG+LL+A R+H N ++ E AA+ L +
Sbjct: 569 HYACMVDLLARAGLFSEAQEFIQQMPVEPDAIAWGSLLSACRVHKNADLAELAAEKLLSI 628
Query: 620 QPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
P + + LSN+Y+ GRW DA I K +D +K+ GFS
Sbjct: 629 DPGNSGAYSALSNVYSACGRWNDAAKIWKRRKDKSVKKETGFS 671
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 127/491 (25%), Positives = 235/491 (47%), Gaps = 37/491 (7%)
Query: 20 SDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKS 79
S + L + L C+A A G+++HS + K GL S + NS++N+Y KCG A++
Sbjct: 159 SPTQFTLTNVLSSCAATEARGVGRKVHSFVVKLGLSSCVPVANSVLNMYGKCGDAETARA 218
Query: 80 MFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREA 139
+F+ + N M+S R++ A +F+ P + VS+ ++I G+ QN +A
Sbjct: 219 VFERMPERSVSSWNAMVSLDAHLGRMDLALSLFENMPDRTIVSWNAVIAGYNQNGLNAKA 278
Query: 140 LEVFRDMRILGVI-PNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLN 198
L F M + P+E T+ SV+S+ +LG + + +H +++ + ++ L++
Sbjct: 279 LWFFSRMLSYSTMAPDEFTITSVLSACANLGMVSIGKQVHAYILRSRMPYIGQVTNALIS 338
Query: 199 MYCVCSSLVEARSLFDE--MKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWG 256
MY S+ AR + + M + N++S+ +L G+ K G ++ ARE+F+ + ++DVV+W
Sbjct: 339 MYAKSGSVENARGVMQQAVMADLNVISFTALLEGYVKLGDMKHAREMFDVMSNRDVVAWT 398
Query: 257 TMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKA 316
MI GY Q EA+ ++R M+ G PN + ++S C G QIH +++
Sbjct: 399 AMIVGYEQNGHNDEAMELFRLMIRSGPEPNSYTVAAVLSVCASLACLEYGKQIHCKAIRS 458
Query: 317 GFDCYDFIQATIIHFYAACGRINLARLQFE-LGIKDHIASWNALIAGFIRNGMIEDARQL 375
+ + +I+ YA G + AR F+ + + +W ++I ++G+ ED
Sbjct: 459 LQEQSSSVSNSIVTMYARSGSLPWARRVFDRVHWRKETVTWTSMIVALAQHGLGED---- 514
Query: 376 FNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTL 435
A+ LF M+ GVKP+ IT V V A G +
Sbjct: 515 ---------------------------AVGLFEEMLRVGVKPDRITFVGVLSACTHVGFV 547
Query: 436 KEG-RWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAII 494
EG R+ + + I + A ++D+ A+ G + A E + +++ W +++
Sbjct: 548 DEGKRYFQQLQDKHGIVPEMSHYACMVDLLARAGLFSEAQEFIQQMPVEPDAIA-WGSLL 606
Query: 495 CGLAMHGDANL 505
+H +A+L
Sbjct: 607 SACRVHKNADL 617
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/361 (24%), Positives = 166/361 (45%), Gaps = 54/361 (14%)
Query: 293 LISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFY-----AACGRINLARLQFE- 346
L+ C A G G IH+ VKAG ++ ++ +Y G AR F+
Sbjct: 29 LLQRCQTAANPGAGRAIHARAVKAGLLASAYLCNNLLSYYAGPAAGGGGGFREARRLFDE 88
Query: 347 -LGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALE 405
+ ++ +WN+L++ + ++G + DAR +F M +RD SW+ M+ G + + A++
Sbjct: 89 IPAAQRNVFTWNSLLSLYAKSGRLADARAVFAEMPERDPVSWTVMVVGLNRVGRFGEAIK 148
Query: 406 LFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYA 465
+F MV G+ P + T+ +V + A++ GR H +V+ ++ ++ ++++MY
Sbjct: 149 MFLDMVTDGLSPTQFTLTNVLSSCAATEARGVGRKVHSFVVKLGLSSCVPVANSVLNMYG 208
Query: 466 KCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNI------- 518
KCG TA VF + +R SVS WNA++ A G +L L ++ ++ R I
Sbjct: 209 KCGDAETARAVFERMPER--SVSSWNAMVSLDAHLGRMDLALSLFENMPDRTIVSWNAVI 266
Query: 519 ------KLNS-------------------ITFIGVLSTCCHAGLVDLGERYFKSMKSVYN 553
LN+ T VLS C + G+V +G++ Y
Sbjct: 267 AGYNQNGLNAKALWFFSRMLSYSTMAPDEFTITSVLSACANLGMVSIGKQVH-----AYI 321
Query: 554 VEPDLKHYG----CMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVG 609
+ + + G ++ + ++G +E+A V++ M VI T L + G V++G
Sbjct: 322 LRSRMPYIGQVTNALISMYAKSGSVENARGVMQQAVMADLNVISFTAL----LEGYVKLG 377
Query: 610 E 610
+
Sbjct: 378 D 378
>gi|148906747|gb|ABR16520.1| unknown [Picea sitchensis]
Length = 644
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 211/573 (36%), Positives = 335/573 (58%), Gaps = 44/573 (7%)
Query: 93 NIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVI 152
N ++S Y++ L +AR VFD+ P+K VS+T+MI +A+++ +EAL F +M+ +G+
Sbjct: 104 NKLVSIYVKLGSLVEARRVFDEMPVKNVVSWTAMIAAYARHEHGQEALGFFYEMQDVGIQ 163
Query: 153 PNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSL 212
PN T AS++ + L + E H ++K + V + L++MY + AR L
Sbjct: 164 PNHFTFASILPACTDLEVLGE---FHDEIVKGGFESNVFVGNGLVDMYAKRGCIEFAREL 220
Query: 213 FDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEAL 272
FD+M +R++VSWN M+ G+ + GL+E A +LF+ IP +DV++W TM+ GY Q + A+
Sbjct: 221 FDKMPQRDVVSWNAMIAGYVQNGLIEDALKLFQEIPKRDVITWNTMMAGYAQCGDVENAV 280
Query: 273 TMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFY 332
++ M P +L+S T+I Y
Sbjct: 281 ELFEKM------PEQ----NLVS-----------------------------WNTMIAGY 301
Query: 333 AACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMIS 392
G + A F++ + ++ SWNA+I+GF +NG +E+A +LF M + +V SW+AMI+
Sbjct: 302 VQNGSVKEAFKLFQIMPERNVISWNAVISGFAQNGQVEEALKLFKTMPECNVVSWNAMIA 361
Query: 393 GYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITL 452
GY+QN Q AL+LF M +KPN T V A A+ L++G AHE V+ +
Sbjct: 362 GYSQNGQAENALKLFGQMQMVDMKPNTETFAIVLPACAALAVLEQGNEAHEVVIRSGFQS 421
Query: 453 NDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSD 512
+ + ++ MYAKCGSI A +VF +R + ++ +A+I G A++G + +L+++
Sbjct: 422 DVLVGNTLVGMYAKCGSIEDARKVFDRMRQQDSA--SLSAMIVGYAINGCSKESLELFEQ 479
Query: 513 LEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAG 572
++ +K + +TF+GVLS CCHAGLVD G +YF M Y++ P ++HYGCM+DLLGRAG
Sbjct: 480 MQFTGLKPDRVTFVGVLSACCHAGLVDEGRQYFDIMTRFYHITPAMEHYGCMIDLLGRAG 539
Query: 573 QLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSN 632
++A ++I MP+K D +WG+LL+A R H N+++GE+ A+ L L P + VLLSN
Sbjct: 540 CFDEANDLINKMPIKPDADMWGSLLSACRTHNNIDLGEKVAQHLIALNPQNPAPYVLLSN 599
Query: 633 IYADAGRWEDAFSIRKEMRDCGMKRLPGFSGVV 665
IYA AGRW+D S+R M+D +K+ G S +V
Sbjct: 600 IYAAAGRWDDIGSVRNRMKDRKVKKKLGCSWIV 632
Score = 186 bits (471), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 131/471 (27%), Positives = 213/471 (45%), Gaps = 72/471 (15%)
Query: 44 QIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRND 103
+ H I K G ESN F+ N L+++YAK G I A+ +FD D V+ N MI+GY++N
Sbjct: 184 EFHDEIVKGGFESNVFVGNGLVDMYAKRGCIEFARELFDKMPQRDVVSWNAMIAGYVQNG 243
Query: 104 RLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVIS 163
+ DA ++F + P + +++ +M+ G+AQ A+E+F M E L S
Sbjct: 244 LIEDALKLFQEIPKRDVITWNTMMAGYAQCGDVENAVELFEKMP-------EQNLVS--- 293
Query: 164 SSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVS 223
W MI G+V S+ EA LF M ERN++S
Sbjct: 294 --------WNT----------MIAGYV-----------QNGSVKEAFKLFQIMPERNVIS 324
Query: 224 WNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGI 283
WN +++GFA+ G VE A +LF+ +P +VVSW MI GY Q + AL ++ M +
Sbjct: 325 WNAVISGFAQNGQVEEALKLFKTMPECNVVSWNAMIAGYSQNGQAENALKLFGQMQMVDM 384
Query: 284 APNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARL 343
PN ++ AC +G + H +++++GF + T++ YA CG I AR
Sbjct: 385 KPNTETFAIVLPACAALAVLEQGNEAHEVVIRSGFQSDVLVGNTLVGMYAKCGSIEDARK 444
Query: 344 QFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMA 403
F+ + AS +A+I G+ NG ++ +
Sbjct: 445 VFDRMRQQDSASLSAMIVGYAINGCSKE-------------------------------S 473
Query: 404 LELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLN-NSITLNDNLSAAIID 462
LELF M G+KP+ +T V V A +G + EGR + + IT +ID
Sbjct: 474 LELFEQMQFTGLKPDRVTFVGVLSACCHAGLVDEGRQYFDIMTRFYHITPAMEHYGCMID 533
Query: 463 MYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDL 513
+ + G + A ++ + + + W +++ H + +L K+ L
Sbjct: 534 LLGRAGCFDEANDLINKMPIKPDA-DMWGSLLSACRTHNNIDLGEKVAQHL 583
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 130/451 (28%), Positives = 220/451 (48%), Gaps = 50/451 (11%)
Query: 137 REALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVI-ISTN 195
REAL + +DM G+ P+ T S++ ++ + + ++LH +I+ + I +
Sbjct: 46 REALHILQDMVENGIWPHSSTYDSLLQGCLNAKSLPDAKLLHAHMIQTQFECQDISLGNK 105
Query: 196 LLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSW 255
L+++Y SLVEAR +F+ +P K+VVSW
Sbjct: 106 LVSIYVKLGSLVEAR-------------------------------RVFDEMPVKNVVSW 134
Query: 256 GTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVK 315
MI Y + E EAL + M GI PN ++ AC GE H IVK
Sbjct: 135 TAMIAAYARHEHGQEALGFFYEMQDVGIQPNHFTFASILPACTDLEVLGE---FHDEIVK 191
Query: 316 AGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQL 375
GF+ F+ ++ YA G I AR F+ + + SWNA+IAG+++NG+IEDA +L
Sbjct: 192 GGFESNVFVGNGLVDMYAKRGCIEFARELFDKMPQRDVVSWNAMIAGYVQNGLIEDALKL 251
Query: 376 FNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTL 435
F + KRDV +W+ M++GYAQ A+ELF M + N ++ ++ +G++
Sbjct: 252 FQEIPKRDVITWNTMMAGYAQCGDVENAVELFEKMPEQ----NLVSWNTMIAGYVQNGSV 307
Query: 436 KEGRWAHEYVLN-NSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAII 494
KE + + N I+ N A+I +A+ G + A ++F + + +V WNA+I
Sbjct: 308 KEAFKLFQIMPERNVISWN-----AVISGFAQNGQVEEALKLFKTMPE--CNVVSWNAMI 360
Query: 495 CGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLG-ERYFKSMKSVYN 553
G + +G A LK++ ++ ++K N+ TF VL C +++ G E + ++S +
Sbjct: 361 AGYSQNGQAENALKLFGQMQMVDMKPNTETFAIVLPACAALAVLEQGNEAHEVVIRSGF- 419
Query: 554 VEPDLKHYGCMVDLLGRAGQLEDAEEVIRSM 584
+ D+ +V + + G +EDA +V M
Sbjct: 420 -QSDVLVGNTLVGMYAKCGSIEDARKVFDRM 449
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 98/390 (25%), Positives = 181/390 (46%), Gaps = 48/390 (12%)
Query: 267 RLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQA 326
RL EAL + + M+ +GI P+ L+ C A + + +H+ +++ F+C D
Sbjct: 44 RLREALHILQDMVENGIWPHSSTYDSLLQGCLNAKSLPDAKLLHAHMIQTQFECQD---- 99
Query: 327 TIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYS 386
I+ N L++ +++ G + +AR++F+ M ++V S
Sbjct: 100 --------------------------ISLGNKLVSIYVKLGSLVEARRVFDEMPVKNVVS 133
Query: 387 WSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVL 446
W+AMI+ YA++E AL F+ M D G++PN T S+ A L E H+ ++
Sbjct: 134 WTAMIAAYARHEHGQEALGFFYEMQDVGIQPNHFTFASILPACTDLEVLGE---FHDEIV 190
Query: 447 NNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLT 506
N + ++DMYAK G I A E+F + R V WNA+I G +G
Sbjct: 191 KGGFESNVFVGNGLVDMYAKRGCIEFARELFDKMPQR--DVVSWNAMIAGYVQNGLIEDA 248
Query: 507 LKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVD 566
LK++ ++ KR++ IT+ +++ G V+ F+ M E +L + M+
Sbjct: 249 LKLFQEIPKRDV----ITWNTMMAGYAQCGDVENAVELFEKMP-----EQNLVSWNTMIA 299
Query: 567 LLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPS 626
+ G +++A ++ + MP + +V+ W +++ +G V E A K + + S
Sbjct: 300 GYVQNGSVKEAFKLFQIMPER-NVISWNAVISGFAQNGQV---EEALKLFKTMPECNVVS 355
Query: 627 RVLLSNIYADAGRWEDAFSIRKEMRDCGMK 656
+ Y+ G+ E+A + +M+ MK
Sbjct: 356 WNAMIAGYSQNGQAENALKLFGQMQMVDMK 385
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 105/248 (42%), Gaps = 64/248 (25%)
Query: 13 QKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCG 72
Q +++ + A+V L C+A + QG + H ++ +SG +S+ + N+L+ +YAKCG
Sbjct: 380 QMVDMKPNTETFAIV--LPACAALAVLEQGNEAHEVVIRSGFQSDVLVGNTLVGMYAKCG 437
Query: 73 LISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQ 132
I A+ +FD D + + MI GY A
Sbjct: 438 SIEDARKVFDRMRQQDSASLSAMIVGY-------------------------------AI 466
Query: 133 NDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVII 192
N C +E+LE+F M+ G+ P+ VT V+S+ H G + E R ++ + F I
Sbjct: 467 NGCSKESLELFEQMQFTGLKPDRVTFVGVLSACCHAGLVDEGRQYFDIMTR-----FYHI 521
Query: 193 STNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSK-D 251
+ + + C M++ +AG + A +L ++P K D
Sbjct: 522 TPAMEHYGC-------------------------MIDLLGRAGCFDEANDLINKMPIKPD 556
Query: 252 VVSWGTMI 259
WG+++
Sbjct: 557 ADMWGSLL 564
>gi|449464596|ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449529868|ref|XP_004171920.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 734
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 235/634 (37%), Positives = 348/634 (54%), Gaps = 66/634 (10%)
Query: 29 ALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYA--KCGLISQAKSMFDSCST 86
+L+ S ++ +QIH+ I K+GL + F + LI A + G IS A S+F+S
Sbjct: 32 SLKLLSKCQSIRTFKQIHAHIIKTGLHNTLFALSKLIEFSAVSRSGDISYAISLFNSIE- 90
Query: 87 LDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDM 146
+P N+ I + SMI G + + AL F M
Sbjct: 91 -EP---NLFI--------------------------WNSMIRGLSMSLSPALALVFFVRM 120
Query: 147 RILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSL 206
GV PN T ++ S L E + +H V+KL V I T+L+NMY +
Sbjct: 121 IYSGVEPNSYTFPFLLKSCAKLASAHEGKQIHAHVLKLGFVSDVFIHTSLINMYAQSGEM 180
Query: 207 VEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVE 266
A+ +FD+ R+ +S+ ++ G+A G ++ AR+LF+ +P KDVVSW MI GY Q+
Sbjct: 181 NNAQLVFDQSNFRDAISFTALIAGYALWGYMDRARQLFDEMPVKDVVSWNAMIAGYAQMG 240
Query: 267 RLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQA 326
R EAL ++ M + PN+ IV ++SAC ++ A G + S I G
Sbjct: 241 RSKEALLLFEDMRKANVPPNESTIVSVLSACAQSNALDLGNSMRSWIEDRGL-------- 292
Query: 327 TIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYS 386
C + L NALI + + G ++ AR+LF++M +RDV S
Sbjct: 293 --------CSNLKLV---------------NALIDMYSKCGDLQTARELFDDMLERDVIS 329
Query: 387 WSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVL 446
W+ MI GY AL LF M+ +GV+P EIT +S+ + A G + G+W H Y+
Sbjct: 330 WNVMIGGYTHMCSYKEALALFREMLASGVEPTEITFLSILPSCAHLGAIDLGKWIHAYIN 389
Query: 447 NNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLT 506
N +++ +LS ++ID+YAKCG+I A +VF ++ S++ WNA+ICGLAMHG A+
Sbjct: 390 KNFNSVSTSLSTSLIDLYAKCGNIVAARQVFDGMK--IKSLASWNAMICGLAMHGQADKA 447
Query: 507 LKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVD 566
+++S + I+ N ITF+G+LS C HAGLVDLG+++F SM Y + P +HYGCM+D
Sbjct: 448 FELFSKMSSDGIEPNEITFVGILSACKHAGLVDLGQQFFSSMVQDYKISPKSQHYGCMID 507
Query: 567 LLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPS 626
LLGRAG E+AE ++++M +K D IWG+LL A R HG VE+GE A+ L L+P + +
Sbjct: 508 LLGRAGLFEEAESLLQNMEVKPDGAIWGSLLGACRDHGRVELGELVAERLFELEPDNPGA 567
Query: 627 RVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPG 660
VLLSNIYA AG+W+D IR + D GMK++PG
Sbjct: 568 YVLLSNIYAGAGKWDDVARIRTRLNDRGMKKVPG 601
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 103/380 (27%), Positives = 161/380 (42%), Gaps = 95/380 (25%)
Query: 13 QKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCG 72
+KAN+ + E +VS L C+ A+ G + S I GL SN + N+LI++Y+KCG
Sbjct: 253 RKANVPPN--ESTIVSVLSACAQSNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCG 310
Query: 73 LISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQ 132
+ A+ +FD D ++ N+MI G YT M
Sbjct: 311 DLQTARELFDDMLERDVISWNVMIGG------------------------YTHMC----- 341
Query: 133 NDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVII 192
++EAL +FR+M GV P E+T S++ S HLG I + +H + K +
Sbjct: 342 --SYKEALALFREMLASGVEPTEITFLSILPSCAHLGAIDLGKWIHAYINKNFNSVSTSL 399
Query: 193 STNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDV 252
ST+L+++Y C ++V AR +FD MK +++ SWN M+ G A G + A ELF ++ S
Sbjct: 400 STSLIDLYAKCGNIVAARQVFDGMKIKSLASWNAMICGLAMHGQADKAFELFSKMSS--- 456
Query: 253 VSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSI 312
DGI PN++ V ++SAC A G Q S
Sbjct: 457 ----------------------------DGIEPNEITFVGILSACKHAGLVDLGQQFFSS 488
Query: 313 IVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDA 372
+V+ + I + +I R G+ E+A
Sbjct: 489 MVQ------------------------------DYKISPKSQHYGCMIDLLGRAGLFEEA 518
Query: 373 RQLFNNMQ-KRDVYSWSAMI 391
L NM+ K D W +++
Sbjct: 519 ESLLQNMEVKPDGAIWGSLL 538
>gi|225458036|ref|XP_002280360.1| PREDICTED: pentatricopeptide repeat-containing protein At1g25360
[Vitis vinifera]
Length = 799
Score = 390 bits (1003), Expect = e-105, Method: Compositional matrix adjust.
Identities = 236/659 (35%), Positives = 366/659 (55%), Gaps = 28/659 (4%)
Query: 28 SALRYCSAH--IAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCS 85
+ L+ C H ++ S + +H+ + SG + +I N LI++Y K + A +FD
Sbjct: 18 AQLQQCCPHNPMSYSIARTVHAHMIASGFKPRGYILNRLIDVYCKSSDLVSAHHLFDEIR 77
Query: 86 TLDPVACNIMISGYIRNDRLNDAREVFDKTP--IKCCVSYTSMIMGFAQNDCWREALEVF 143
D VA +I+ + N ARE+F TP I+ V Y +MI G++ N+ A+E+F
Sbjct: 78 QPDIVARTTLIAAHSSAGNSNLAREIFFATPLGIRDTVCYNAMITGYSHNNDGFGAIELF 137
Query: 144 RDMRILGVIPNEVTLASVISS-SVHLGGIWECRMLHGLVIKLMIDGFVIISTN-LLNMYC 201
RD+ G P+ T SV+ + ++ + +C+ +H V+K GFV N LL+++
Sbjct: 138 RDLLRNGFRPDNFTFTSVLGALALIVEDEKQCQQIHCAVVK-SGSGFVTSVLNALLSVFV 196
Query: 202 VCSS---------LVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDV 252
C+S + AR LFDEM ER+ +SW M+ G+ + G ++ AR+ + + K V
Sbjct: 197 KCASSPLVSSSSLMAAARKLFDEMTERDELSWTTMIAGYVRNGELDAARQFLDGMTEKLV 256
Query: 253 VSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSI 312
V+W MI GY+ EAL M+R M GI ++ ++SAC A F G Q+H+
Sbjct: 257 VAWNAMISGYVHHGFFLEALEMFRKMYLLGIQWDEFTYTSVLSACANAGFFLHGKQVHAY 316
Query: 313 IVKA----GFDCYDFIQATIIHFYAACGRINLARLQF-ELGIKDHIASWNALIAGFIRNG 367
I++ D + + Y CG+++ AR F ++ +KD + SWNA+++G++ G
Sbjct: 317 ILRTEPRPSLDFSLSVNNALATLYWKCGKVDEARQVFNQMPVKD-LVSWNAILSGYVNAG 375
Query: 368 MIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFC 427
I++A+ F M +R++ +W+ MISG AQN +L+LF+ M G +P +
Sbjct: 376 RIDEAKSFFEEMPERNLLTWTVMISGLAQNGFGEESLKLFNRMKSEGFEPCDYAFAGAII 435
Query: 428 AIASSGTLKEGRWAHEYVLNNSITLNDNLSA--AIIDMYAKCGSINTAFEVFYHIRDRTT 485
A A L GR H ++ + + +LSA A+I MYAKCG + A +F +
Sbjct: 436 ACAWLAALMHGRQLHAQLVR--LGFDSSLSAGNALITMYAKCGVVEAAHCLFLTM-PYLD 492
Query: 486 SVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYF 545
SVS WNA+I L HG L+++ + K +I + ITF+ VLSTC HAGLV+ G RYF
Sbjct: 493 SVS-WNAMIAALGQHGHGAQALELFELMLKEDILPDRITFLTVLSTCSHAGLVEEGHRYF 551
Query: 546 KSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGN 605
KSM +Y + P HY M+DLL RAG+ +A+++I +MP++ IW LLA RIHGN
Sbjct: 552 KSMSGLYGICPGEDHYARMIDLLCRAGKFSEAKDMIETMPVEPGPPIWEALLAGCRIHGN 611
Query: 606 VEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
+++G +AA+ L L P H + VLLSN+YA GRW+D +RK MRD G+K+ PG S +
Sbjct: 612 MDLGIQAAERLFELMPQHDGTYVLLSNMYATVGRWDDVAKVRKLMRDKGVKKEPGCSWI 670
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 106/255 (41%), Gaps = 48/255 (18%)
Query: 8 SVFNSQKAN-LQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLIN 66
+FN K+ + DY A A+ C+ A+ G+Q+H+ + + G +S+ N+LI
Sbjct: 413 KLFNRMKSEGFEPCDY--AFAGAIIACAWLAALMHGRQLHAQLVRLGFDSSLSAGNALIT 470
Query: 67 LYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSM 126
+YAKCG++ A +F + LD V S+ +M
Sbjct: 471 MYAKCGVVEAAHCLFLTMPYLDSV-------------------------------SWNAM 499
Query: 127 IMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMI 186
I Q+ +ALE+F M ++P+ +T +V+S+ H G + E K M
Sbjct: 500 IAALGQHGHGAQALELFELMLKEDILPDRITFLTVLSTCSHAGLVEEGHR----YFKSMS 555
Query: 187 DGFVIIS-----TNLLNMYCVCSSLVEARSLFDEMK-ERNIVSWNVMLNGFAKAGLVEL- 239
+ I ++++ C EA+ + + M E W +L G G ++L
Sbjct: 556 GLYGICPGEDHYARMIDLLCRAGKFSEAKDMIETMPVEPGPPIWEALLAGCRIHGNMDLG 615
Query: 240 ---ARELFERIPSKD 251
A LFE +P D
Sbjct: 616 IQAAERLFELMPQHD 630
>gi|225423499|ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 738
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 236/666 (35%), Positives = 347/666 (52%), Gaps = 74/666 (11%)
Query: 2 PLDHFHSVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQ 61
P HF + LQN L L+S + + +QIHS I K+GL + F
Sbjct: 15 PTLHFQPTSDPPYKLLQNHP-SLTLLSTCK------SFQNLKQIHSQIIKTGLHNTQFAL 67
Query: 62 NSLINLYA--KCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKC 119
+ LI A G +S A +F+S + N MI G
Sbjct: 68 SKLIEFCAISPFGNLSYALLLFESIEQPNQFIWNTMIRGN-------------------- 107
Query: 120 CVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHG 179
S +S +G A++ + M + GV PN T ++ S +G E + +HG
Sbjct: 108 --SLSSSPVG---------AIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQIHG 156
Query: 180 LVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVEL 239
V+KL ++ + T+L+NMY L A +F + R+ VS+ ++ G+ G ++
Sbjct: 157 HVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLDD 216
Query: 240 ARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGR 299
AR LFE IP +D VSW MI GY Q R EAL ++ M +APN+ +V ++SAC +
Sbjct: 217 ARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQ 276
Query: 300 AMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNAL 359
+ + G + S I G + +I Y+ CG ++ AR FE + I SWN +
Sbjct: 277 SGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVM 336
Query: 360 IAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNE 419
I G+ ++A LF MQ+ + V+PN+
Sbjct: 337 IGGYSHMNSYKEALALFRKMQQ-------------------------------SNVEPND 365
Query: 420 ITMVSVFCAIASSGTLKEGRWAHEYVLNNSITL-NDNLSAAIIDMYAKCGSINTAFEVFY 478
+T VS+ A A G L G+W H Y+ + L N +L ++IDMYAKCG+I A +VF
Sbjct: 366 VTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFA 425
Query: 479 HIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLV 538
++ + S+ WNA+I GLAMHG AN+ L+++ + + + ITF+GVLS C HAGLV
Sbjct: 426 GMKPK--SLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLV 483
Query: 539 DLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLA 598
+LG + F SM Y++ P L+HYGCM+DLLGRAG ++AE ++++M MK D IWG+LL
Sbjct: 484 ELGRQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLLG 543
Query: 599 ASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRL 658
A R+HGNVE+GE AAK L L+P + + VLLSNIYA AGRW+D IR ++ D GMK++
Sbjct: 544 ACRVHGNVELGEFAAKHLFELEPENPGAYVLLSNIYATAGRWDDVARIRTKLNDKGMKKV 603
Query: 659 PGFSGV 664
PG S +
Sbjct: 604 PGCSSI 609
>gi|449467189|ref|XP_004151307.1| PREDICTED: pentatricopeptide repeat-containing protein At1g53600,
mitochondrial-like [Cucumis sativus]
Length = 711
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 213/638 (33%), Positives = 353/638 (55%), Gaps = 49/638 (7%)
Query: 62 NSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCV 121
NS I + G I +A+S+F+ + V+ +++ Y N +N AREVF+K P
Sbjct: 51 NSQITKLGRNGCIKEAESIFNRMPNKNTVSWTALLTAYAENSEINKAREVFNKIPDPNVA 110
Query: 122 SYTSMIMGFAQNDCWREALEVFRDMRILGVIP--NEVTLASVISSSVHLGGIWECRMLHG 179
SY +MI + + + EA E+F M P N V+ A++I+ VH G +
Sbjct: 111 SYNAMITAYHRRNMVDEAFELFSSM------PQRNSVSYATMITGFVHAG-------MFD 157
Query: 180 LVIKLMIDGFVIISTN-LLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVE 238
+ KL + VI+S+N L+N Y + +A +FD M E+++VSW+ M++G + G +
Sbjct: 158 MAEKLHREKPVIVSSNVLINGYSKVGRVEDAVRIFDGMAEKDVVSWSSMISGLCRVGKIV 217
Query: 239 LARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACG 298
AR+LF+++P ++VV+W MIDGY+++ L + ++ M +G+ N + L+ ACG
Sbjct: 218 EARKLFDKMPDRNVVTWTLMIDGYMKMNFLKDGFILFLNMRREGVEVNATTLTVLLEACG 277
Query: 299 RAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNA 358
+GEG+QIH +++ GFD ++ +II Y+ C I+ A QF+L +K I +WN+
Sbjct: 278 SFDRYGEGIQIHGLVLSLGFDVDAYLANSIITMYSRCYSIDAAAKQFDLMVKKDIVTWNS 337
Query: 359 LIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQN--------------------- 397
LI G++++G +E A LF NM ++DV SW+ +I G+A
Sbjct: 338 LITGYVQSGNLEKAVFLFENMPQKDVVSWTTLICGFASEGRIDEFIGLFQMMPEKDAIAW 397
Query: 398 ----------EQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLN 447
E+ +A F M+ + +KPN T+ V A AS L +G H V
Sbjct: 398 TAVISGLVSIEEYEIAFHWFIKMLQSVIKPNAFTLSCVLSAGASMAILNQGLQIHAIVTK 457
Query: 448 NSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTL 507
S+ + ++ +++ MY+KCG+++ A ++FY+I+ +V +N II GLA +G L
Sbjct: 458 MSMENDLSIQNSLVSMYSKCGNVDDALKMFYYIK--VPNVVAYNTIITGLAQNGLGKEAL 515
Query: 508 KIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDL 567
+I++ ++ + N ITF+GVLS C H GLV+ G RYF M+S+Y+++P+ HY CMVDL
Sbjct: 516 EIFTKMQDDYLVPNHITFLGVLSACVHVGLVEEGRRYFDLMRSLYDIQPEPDHYACMVDL 575
Query: 568 LGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSR 627
L RAG ++A ++ SMP +WG +L AS H ++V E AA++L L+P+
Sbjct: 576 LCRAGMFDEAVSLVSSMPFDPHQGVWGAVLGASWTHLRLDVAELAAQNLFELEPNSATPY 635
Query: 628 VLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGVV 665
V+LSN+++ +G IR + G+K+ PG S ++
Sbjct: 636 VILSNLHSISGDERKHELIRLMKKSRGLKKSPGCSWII 673
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 100/460 (21%), Positives = 198/460 (43%), Gaps = 60/460 (13%)
Query: 204 SSLVEARSLFD----EMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMI 259
+ ++ R FD + + +V N + + G ++ A +F R+P+K+ VSW ++
Sbjct: 26 TQILSKRGNFDSATRQKSSKFLVYCNSQITKLGRNGCIKEAESIFNRMPNKNTVSWTALL 85
Query: 260 DGYLQVERLSEALTMYRAMLCDGIAPNDVMIV------------DLISACGRAMAFGEGL 307
Y + +++A ++ + +A + MI +L S+ + +
Sbjct: 86 TAYAENSEINKAREVFNKIPDPNVASYNAMITAYHRRNMVDEAFELFSSMPQRNSVSYAT 145
Query: 308 QIHSIIVKAGFDCYDFIQA---------TIIHFYAACGRINLARLQFELGIKDHIASWNA 358
I + FD + + +I+ Y+ GR+ A F+ + + SW++
Sbjct: 146 MITGFVHAGMFDMAEKLHREKPVIVSSNVLINGYSKVGRVEDAVRIFDGMAEKDVVSWSS 205
Query: 359 LIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPN 418
+I+G R G I +AR+LF+ M R+V +W+ MI GY + LF M GV+ N
Sbjct: 206 MISGLCRVGKIVEARKLFDKMPDRNVVTWTLMIDGYMKMNFLKDGFILFLNMRREGVEVN 265
Query: 419 EITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFY 478
T+ + A S EG H VL+ ++ L+ +II MY++C SI+ A + F
Sbjct: 266 ATTLTVLLEACGSFDRYGEGIQIHGLVLSLGFDVDAYLANSIITMYSRCYSIDAAAKQFD 325
Query: 479 HIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSI------------TFI 526
+ + + WN++I G G+ + ++ ++ ++++ + FI
Sbjct: 326 LMVKK--DIVTWNSLITGYVQSGNLEKAVFLFENMPQKDVVSWTTLICGFASEGRIDEFI 383
Query: 527 GVLS----------TCCHAGLVDLGER------YFKSMKSVYNVEPDLKHYGCMVDLLGR 570
G+ T +GLV + E + K ++SV ++P+ C++
Sbjct: 384 GLFQMMPEKDAIAWTAVISGLVSIEEYEIAFHWFIKMLQSV--IKPNAFTLSCVLSAGAS 441
Query: 571 AGQLEDAEE---VIRSMPMKADVVIWGTLLAASRIHGNVE 607
L + ++ M M+ D+ I +L++ GNV+
Sbjct: 442 MAILNQGLQIHAIVTKMSMENDLSIQNSLVSMYSKCGNVD 481
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 93/386 (24%), Positives = 166/386 (43%), Gaps = 92/386 (23%)
Query: 25 ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSC 84
L L C + +G QIH L+ G + + ++ NS+I +Y++C I A FD
Sbjct: 268 TLTVLLEACGSFDRYGEGIQIHGLVLSLGFDVDAYLANSIITMYSRCYSIDAAAKQFDLM 327
Query: 85 STLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFR 144
D V N +I+GY+++ L A +F+ P K VS+T++I GFA E + +F+
Sbjct: 328 VKKDIVTWNSLITGYVQSGNLEKAVFLFENMPQKDVVSWTTLICGFASEGRIDEFIGLFQ 387
Query: 145 DMR----------ILGVI---------------------PNEVTLASVISSSVHLGGIWE 173
M I G++ PN TL+ V+S+ + + +
Sbjct: 388 MMPEKDAIAWTAVISGLVSIEEYEIAFHWFIKMLQSVIKPNAFTLSCVLSAGASMAILNQ 447
Query: 174 CRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAK 233
+H +V K+ ++ + I +L++MY C ++ +A +F +K N+V++N ++ G A+
Sbjct: 448 GLQIHAIVTKMSMENDLSIQNSLVSMYSKCGNVDDALKMFYYIKVPNVVAYNTIITGLAQ 507
Query: 234 AGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDL 293
GL + A E+F + M D YL PN + + +
Sbjct: 508 NGLGKEALEIFTK-----------MQDDYL--------------------VPNHITFLGV 536
Query: 294 ISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHI 353
+SAC +H +V+ G +D +++ L +Q E DH
Sbjct: 537 LSAC-----------VHVGLVEEGRRYFDLMRS-------------LYDIQPE---PDHY 569
Query: 354 ASWNALIAGFIRNGMIEDARQLFNNM 379
A ++ R GM ++A L ++M
Sbjct: 570 A---CMVDLLCRAGMFDEAVSLVSSM 592
>gi|449530420|ref|XP_004172193.1| PREDICTED: pentatricopeptide repeat-containing protein At1g53600,
mitochondrial-like, partial [Cucumis sativus]
Length = 719
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 212/636 (33%), Positives = 352/636 (55%), Gaps = 45/636 (7%)
Query: 62 NSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCV 121
NS I + G I +A+S+F+ + V+ +++ Y N +N AREVF+K P
Sbjct: 59 NSQITKLGRNGCIKEAESIFNRMPNKNTVSWTALLTAYAENSEINKAREVFNKIPDPNVA 118
Query: 122 SYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLV 181
SY +MI + + + EA E+F M N V+ A++I+ VH G + +
Sbjct: 119 SYNAMITAYHRRNMVDEAFELFSSMPQ----RNSVSYATMITGFVHAG-------MFDMA 167
Query: 182 IKLMIDGFVIISTN-LLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELA 240
KL + VI+S+N L+N Y + +A +FD M E+++VSW+ M++G + G + A
Sbjct: 168 EKLHREKPVIVSSNVLINGYSKVGRVEDAVRIFDGMAEKDVVSWSSMISGLCRVGKIVEA 227
Query: 241 RELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRA 300
R+LF+++P ++VV+W MIDGY+++ L + ++ M +G+ N + L+ ACG
Sbjct: 228 RKLFDKMPDRNVVTWTLMIDGYMKMNFLKDGFILFLNMRREGVEVNATTLTVLLEACGSF 287
Query: 301 MAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALI 360
+GEG+QIH +++ GFD ++ +II Y+ C I+ A QF+L +K I +WN+LI
Sbjct: 288 DRYGEGIQIHGLVLSLGFDVDAYLANSIITMYSRCYSIDAAAKQFDLMVKKDIVTWNSLI 347
Query: 361 AGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQN----------------------- 397
G++++G +E A LF NM ++DV SW+ +I G+A
Sbjct: 348 TGYVQSGNLEKAVFLFENMPQKDVVSWTTLICGFASEGRIDEFIGLFQMMPEKDAIAWTA 407
Query: 398 --------EQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNS 449
E+ +A F M+ + +KPN T+ V A AS L +G H V S
Sbjct: 408 VISGLVSIEEYEIAFHWFIKMLQSVIKPNAFTLSCVLSAGASMAILNQGLQIHAIVTKMS 467
Query: 450 ITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKI 509
+ + ++ +++ MY+KCG+++ A ++FY+I+ +V +N II GLA +G L+I
Sbjct: 468 MENDLSIQNSLVSMYSKCGNVDDALKMFYYIK--VPNVVAYNTIITGLAQNGLGKEALEI 525
Query: 510 YSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLG 569
++ ++ + N ITF+GVLS C H GLV+ G RYF M+S+Y+++P+ HY CMVDLL
Sbjct: 526 FTKMQDDYLVPNHITFLGVLSACVHVGLVEEGRRYFDLMRSLYDIQPEPDHYACMVDLLC 585
Query: 570 RAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVL 629
RAG ++A ++ SMP +WG +L AS H ++V E AA++L L+P+ V+
Sbjct: 586 RAGMFDEAVSLVSSMPFDPHQGVWGAVLGASWTHLRLDVAELAAQNLFELEPNSATPYVI 645
Query: 630 LSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGVV 665
LSN+++ +G IR + G+K+ PG S ++
Sbjct: 646 LSNLHSISGDERKHELIRLMKKSRGLKKSPGCSWII 681
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 100/460 (21%), Positives = 198/460 (43%), Gaps = 60/460 (13%)
Query: 204 SSLVEARSLFD----EMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMI 259
+ ++ R FD + + +V N + + G ++ A +F R+P+K+ VSW ++
Sbjct: 34 TQILSKRGNFDSATRQKSSKFLVYCNSQITKLGRNGCIKEAESIFNRMPNKNTVSWTALL 93
Query: 260 DGYLQVERLSEALTMYRAMLCDGIAPNDVMIV------------DLISACGRAMAFGEGL 307
Y + +++A ++ + +A + MI +L S+ + +
Sbjct: 94 TAYAENSEINKAREVFNKIPDPNVASYNAMITAYHRRNMVDEAFELFSSMPQRNSVSYAT 153
Query: 308 QIHSIIVKAGFDCYDFIQA---------TIIHFYAACGRINLARLQFELGIKDHIASWNA 358
I + FD + + +I+ Y+ GR+ A F+ + + SW++
Sbjct: 154 MITGFVHAGMFDMAEKLHREKPVIVSSNVLINGYSKVGRVEDAVRIFDGMAEKDVVSWSS 213
Query: 359 LIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPN 418
+I+G R G I +AR+LF+ M R+V +W+ MI GY + LF M GV+ N
Sbjct: 214 MISGLCRVGKIVEARKLFDKMPDRNVVTWTLMIDGYMKMNFLKDGFILFLNMRREGVEVN 273
Query: 419 EITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFY 478
T+ + A S EG H VL+ ++ L+ +II MY++C SI+ A + F
Sbjct: 274 ATTLTVLLEACGSFDRYGEGIQIHGLVLSLGFDVDAYLANSIITMYSRCYSIDAAAKQFD 333
Query: 479 HIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSI------------TFI 526
+ + + WN++I G G+ + ++ ++ ++++ + FI
Sbjct: 334 LMVKK--DIVTWNSLITGYVQSGNLEKAVFLFENMPQKDVVSWTTLICGFASEGRIDEFI 391
Query: 527 GVLS----------TCCHAGLVDLGER------YFKSMKSVYNVEPDLKHYGCMVDLLGR 570
G+ T +GLV + E + K ++SV ++P+ C++
Sbjct: 392 GLFQMMPEKDAIAWTAVISGLVSIEEYEIAFHWFIKMLQSV--IKPNAFTLSCVLSAGAS 449
Query: 571 AGQLEDAEE---VIRSMPMKADVVIWGTLLAASRIHGNVE 607
L + ++ M M+ D+ I +L++ GNV+
Sbjct: 450 MAILNQGLQIHAIVTKMSMENDLSIQNSLVSMYSKCGNVD 489
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 93/386 (24%), Positives = 166/386 (43%), Gaps = 92/386 (23%)
Query: 25 ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSC 84
L L C + +G QIH L+ G + + ++ NS+I +Y++C I A FD
Sbjct: 276 TLTVLLEACGSFDRYGEGIQIHGLVLSLGFDVDAYLANSIITMYSRCYSIDAAAKQFDLM 335
Query: 85 STLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFR 144
D V N +I+GY+++ L A +F+ P K VS+T++I GFA E + +F+
Sbjct: 336 VKKDIVTWNSLITGYVQSGNLEKAVFLFENMPQKDVVSWTTLICGFASEGRIDEFIGLFQ 395
Query: 145 DMR----------ILGVI---------------------PNEVTLASVISSSVHLGGIWE 173
M I G++ PN TL+ V+S+ + + +
Sbjct: 396 MMPEKDAIAWTAVISGLVSIEEYEIAFHWFIKMLQSVIKPNAFTLSCVLSAGASMAILNQ 455
Query: 174 CRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAK 233
+H +V K+ ++ + I +L++MY C ++ +A +F +K N+V++N ++ G A+
Sbjct: 456 GLQIHAIVTKMSMENDLSIQNSLVSMYSKCGNVDDALKMFYYIKVPNVVAYNTIITGLAQ 515
Query: 234 AGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDL 293
GL + A E+F + M D YL PN + + +
Sbjct: 516 NGLGKEALEIFTK-----------MQDDYL--------------------VPNHITFLGV 544
Query: 294 ISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHI 353
+SAC +H +V+ G +D +++ L +Q E DH
Sbjct: 545 LSAC-----------VHVGLVEEGRRYFDLMRS-------------LYDIQPE---PDHY 577
Query: 354 ASWNALIAGFIRNGMIEDARQLFNNM 379
A ++ R GM ++A L ++M
Sbjct: 578 A---CMVDLLCRAGMFDEAVSLVSSM 600
>gi|449470104|ref|XP_004152758.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
gi|449504088|ref|XP_004162249.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 225/644 (34%), Positives = 347/644 (53%), Gaps = 24/644 (3%)
Query: 38 AVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMIS 97
+ S + +H + SG + I N LI++Y K A+ +FD D +A +I+
Sbjct: 28 SYSLARTVHGHVIASGFKLRGHIVNRLIDIYWKSSDFVYARKLFDEIPQPDVIARTTLIT 87
Query: 98 GYIRNDRLNDAREVFDKTPI--KCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNE 155
Y L ARE+F++TP+ + V Y +MI G++ + A+E+FR MR P++
Sbjct: 88 AYSALGNLKMAREIFNETPLDMRDTVFYNAMITGYSHMNDGHSAIELFRAMRWANFQPDD 147
Query: 156 VTLASVISSSVHL-GGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSS--------- 205
T ASV+S+S + +C +HG V+K I+ F + LL++Y C+S
Sbjct: 148 FTFASVLSASTLIFYDERQCGQMHGTVVKFGIEIFPAVLNALLSVYVKCASSPLVSSSSL 207
Query: 206 LVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQV 265
+ AR LFDEM +RN W ++ G+ + G + ARE+ + + + ++W MI GYL
Sbjct: 208 MASARKLFDEMPKRNEFIWTTLITGYVRNGDLTGAREILDTMTEQPGIAWNAMISGYLHH 267
Query: 266 ERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDC-YDFI 324
+ALT++R M G+ ++ +ISAC F G Q+H+ I+K + DF+
Sbjct: 268 GLFEDALTLFRKMRLLGVQVDESTYTSVISACADGGFFLLGKQVHAYILKNELNPDRDFL 327
Query: 325 QA---TIIHFYAACGRINLAR-LQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ 380
+ T+I Y G+++ AR + +E+ +KD I +WN L++G++ G +E+A+ F M
Sbjct: 328 LSVGNTLITLYWKYGKVDGARKIFYEMPVKD-IITWNTLLSGYVNAGRMEEAKSFFAQMP 386
Query: 381 KRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRW 440
++++ +W+ MISG AQN AL+LF+ M G +PN+ A + G L+ GR
Sbjct: 387 EKNLLTWTVMISGLAQNGFGEQALKLFNQMKLDGYEPNDYAFAGAITACSVLGALENGRQ 446
Query: 441 AHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSP--WNAIICGLA 498
H +++ ++ A+I MYA+CG + A +F + V P WN++I L
Sbjct: 447 LHAQIVHLGHDSTLSVGNAMITMYARCGIVEAARTMFLTM----PFVDPVSWNSMIAALG 502
Query: 499 MHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDL 558
HG +++Y + K I + TF+ VLS C HAGLV+ G RYF SM Y + P
Sbjct: 503 QHGHGVKAIELYEQMLKEGILPDRRTFLTVLSACSHAGLVEEGNRYFNSMLENYGIAPGE 562
Query: 559 KHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAG 618
HY M+DL RAG+ DA+ VI SMP +A IW LLA R HGN+++G AA+ L
Sbjct: 563 DHYARMIDLFCRAGKFSDAKNVIDSMPFEARAPIWEALLAGCRTHGNMDLGIEAAEKLFK 622
Query: 619 LQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
L P H + VLLSN+YA GRW D RK MRD G+K+ P S
Sbjct: 623 LIPQHDGTYVLLSNMYASLGRWNDVARTRKLMRDRGVKKEPACS 666
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 112/251 (44%), Gaps = 40/251 (15%)
Query: 8 SVFNSQKAN-LQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLIN 66
+FN K + + +DY A A+ CS A+ G+Q+H+ I G +S + N++I
Sbjct: 411 KLFNQMKLDGYEPNDY--AFAGAITACSVLGALENGRQLHAQIVHLGHDSTLSVGNAMIT 468
Query: 67 LYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSM 126
+YA+CG++ A++MF + +DP VS+ SM
Sbjct: 469 MYARCGIVEAARTMFLTMPFVDP-------------------------------VSWNSM 497
Query: 127 IMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWEC-RMLHGLVIKLM 185
I Q+ +A+E++ M G++P+ T +V+S+ H G + E R + ++
Sbjct: 498 IAALGQHGHGVKAIELYEQMLKEGILPDRRTFLTVLSACSHAGLVEEGNRYFNSMLENYG 557
Query: 186 IDGFVIISTNLLNMYCVCSSLVEARSLFDEMK-ERNIVSWNVMLNGFAKAGL----VELA 240
I +++++C +A+++ D M E W +L G G +E A
Sbjct: 558 IAPGEDHYARMIDLFCRAGKFSDAKNVIDSMPFEARAPIWEALLAGCRTHGNMDLGIEAA 617
Query: 241 RELFERIPSKD 251
+LF+ IP D
Sbjct: 618 EKLFKLIPQHD 628
>gi|125545880|gb|EAY92019.1| hypothetical protein OsI_13712 [Oryza sativa Indica Group]
Length = 804
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 208/642 (32%), Positives = 359/642 (55%), Gaps = 10/642 (1%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAK----CGLISQAKSMFDS-- 83
L+ C G+ IH+ K+GL ++ ++ N+L++ Y + G + A+ +FD
Sbjct: 33 LQLCQTAANPGAGRAIHARAVKAGLLASAYLCNNLLSYYGETAGGAGGLRDARRLFDEIP 92
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
+ + N ++S + ++ RL DAR VF + P + VS+T M++G + + EA++
Sbjct: 93 LARRNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTL 152
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
DM G P + TL +V+SS R +H V+KL + V ++ ++LNMY C
Sbjct: 153 LDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKC 212
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYL 263
A ++F+ M R++ SWN M++ G ++LA LFE +P + +VSW MI GY
Sbjct: 213 GDAETASTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPGRSIVSWNAMIAGYN 272
Query: 264 QVERLSEALTMYRAMLCDG-IAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD 322
Q ++AL ++ ML + +AP++ I ++SAC G Q+H+ I++
Sbjct: 273 QNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNS 332
Query: 323 FIQATIIHFYAACGRINLARLQFELGIKD--HIASWNALIAGFIRNGMIEDARQLFNNMQ 380
+ +I YA G + AR + ++ ++ S+ AL+ G+++ G +E AR++F M
Sbjct: 333 QVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMN 392
Query: 381 KRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRW 440
RDV +W+AMI GY QN + + A++LF M+ G +PN T+ +V AS L G+
Sbjct: 393 NRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQ 452
Query: 441 AHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMH 500
H + + + + ++S AII MYA+ GS A +F + R +++ W ++I LA H
Sbjct: 453 IHCRAIRSLLERSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETIT-WTSMIVALAQH 511
Query: 501 GDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKH 560
G + ++ ++ + ++ + IT++GVLS C HAG V+ G+RY+ +K+ + + P++ H
Sbjct: 512 GQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSH 571
Query: 561 YGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQ 620
Y CMVDLL RAG +A+E IR MP++ D + WG+LL+A R+H N E+ E AA+ L +
Sbjct: 572 YACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSID 631
Query: 621 PSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
P++ + ++N+Y+ GRW DA I K ++ +++ GFS
Sbjct: 632 PNNSGAYSAIANVYSACGRWSDAARIWKARKEKAVRKETGFS 673
Score = 191 bits (486), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 131/492 (26%), Positives = 236/492 (47%), Gaps = 45/492 (9%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
+ L + L C+ A + G+++HS + K GL S + NS++N+Y KCG A ++F+
Sbjct: 164 QFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDAETASTVFE 223
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+ N M+S R++ A +F+ P + VS+ +MI G+ QN +AL++
Sbjct: 224 RMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPGRSIVSWNAMIAGYNQNGLDAKALKL 283
Query: 143 F-RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYC 201
F R + + P+E T+ SV+S+ +LG + + +H +++ + ++ L++ Y
Sbjct: 284 FSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYA 343
Query: 202 VCSSLVEARSLFDEMKER--NIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMI 259
S+ AR + D+ E N++S+ +L G+ K G +E ARE+F + ++DVV+W MI
Sbjct: 344 KSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMI 403
Query: 260 DGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFD 319
GY Q R EA+ ++R+M+ G PN + ++S C G QIH +++ +
Sbjct: 404 VGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLE 463
Query: 320 CYDFIQATIIHFYAACGRINLARLQF-ELGIKDHIASWNALIAGFIRNGMIEDARQLFNN 378
+ II YA G AR F ++ + +W ++I ++G E+
Sbjct: 464 RSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEE------- 516
Query: 379 MQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG 438
A+ LF M+ AGV+P+ IT V V A + +G + EG
Sbjct: 517 ------------------------AVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEG 552
Query: 439 RWAHEYVLN-NSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSP----WNAI 493
+ ++ + N + I + A ++D+ A+ G + A E R V P W ++
Sbjct: 553 KRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFI-----RRMPVEPDAIAWGSL 607
Query: 494 ICGLAMHGDANL 505
+ +H +A L
Sbjct: 608 LSACRVHKNAEL 619
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 98/406 (24%), Positives = 184/406 (45%), Gaps = 55/406 (13%)
Query: 293 LISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFY-----AACGRINLARLQFEL 347
L+ C A G G IH+ VKAG ++ ++ +Y A G + RL E+
Sbjct: 32 LLQLCQTAANPGAGRAIHARAVKAGLLASAYLCNNLLSYYGETAGGAGGLRDARRLFDEI 91
Query: 348 GI-KDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALEL 406
+ + ++ +WN+L++ F ++G + DAR +F M +RD SW+ M+ G + + A++
Sbjct: 92 PLARRNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKT 151
Query: 407 FHGMVDAGVKPNEITMVSVF--CAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMY 464
M G P + T+ +V CA+ +G + GR H +V+ + ++ ++++MY
Sbjct: 152 LLDMTADGFTPTQFTLTNVLSSCAVTQAGAV--GRKVHSFVVKLGLGSCVPVANSVLNMY 209
Query: 465 AKCGSINTAFEVFYHIRDRTT-----------------------------SVSPWNAIIC 495
KCG TA VF + R+ S+ WNA+I
Sbjct: 210 GKCGDAETASTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPGRSIVSWNAMIA 269
Query: 496 GLAMHGDANLTLKIYSD-LEKRNIKLNSITFIGVLSTCCHAGLVDLGER---YFKSMKSV 551
G +G LK++S L + ++ + T VLS C + G V +G++ Y +
Sbjct: 270 GYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMA 329
Query: 552 YNVEPDLKHYGCMVDLLGRAGQLEDAEEVI-RSMPMKADVVIWGTLLAASRIHGNVEVGE 610
YN + ++ ++G +E+A ++ +SM +V+ + LL G V++G+
Sbjct: 330 YNSQVT----NALISTYAKSGSVENARRIMDQSMETDLNVISFTALL-----EGYVKIGD 380
Query: 611 -RAAKSLAGLQPSHG-PSRVLLSNIYADAGRWEDAFSIRKEMRDCG 654
+A+ + G+ + + + Y GR ++A + + M CG
Sbjct: 381 MESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCG 426
>gi|115455659|ref|NP_001051430.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|24899461|gb|AAN65031.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108711328|gb|ABF99123.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113549901|dbj|BAF13344.1| Os03g0775400 [Oryza sativa Japonica Group]
gi|215741536|dbj|BAG98031.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 804
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 208/642 (32%), Positives = 359/642 (55%), Gaps = 10/642 (1%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAK----CGLISQAKSMFDS-- 83
L+ C G+ IH+ K+GL ++ ++ N+L++ Y + G + A+ +FD
Sbjct: 33 LQLCQTAANPGAGRAIHARAVKAGLLASAYLCNNLLSYYGETAGGAGGLRDARRLFDEIP 92
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
+ + N ++S + ++ RL DAR VF + P + VS+T M++G + + EA++
Sbjct: 93 LARRNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTL 152
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
DM G P + TL +V+SS R +H V+KL + V ++ ++LNMY C
Sbjct: 153 LDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKC 212
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYL 263
A ++F+ M R++ SWN M++ G ++LA LFE +P + +VSW MI GY
Sbjct: 213 GDSETATTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYN 272
Query: 264 QVERLSEALTMYRAMLCDG-IAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD 322
Q ++AL ++ ML + +AP++ I ++SAC G Q+H+ I++
Sbjct: 273 QNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNS 332
Query: 323 FIQATIIHFYAACGRINLARLQFELGIKD--HIASWNALIAGFIRNGMIEDARQLFNNMQ 380
+ +I YA G + AR + ++ ++ S+ AL+ G+++ G +E AR++F M
Sbjct: 333 QVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMN 392
Query: 381 KRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRW 440
RDV +W+AMI GY QN + + A++LF M+ G +PN T+ +V AS L G+
Sbjct: 393 NRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQ 452
Query: 441 AHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMH 500
H + + + + ++S AII MYA+ GS A +F + R +++ W ++I LA H
Sbjct: 453 IHCRAIRSLLEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETIT-WTSMIVALAQH 511
Query: 501 GDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKH 560
G + ++ ++ + ++ + IT++GVLS C HAG V+ G+RY+ +K+ + + P++ H
Sbjct: 512 GQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSH 571
Query: 561 YGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQ 620
Y CMVDLL RAG +A+E IR MP++ D + WG+LL+A R+H N E+ E AA+ L +
Sbjct: 572 YACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSID 631
Query: 621 PSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
P++ + ++N+Y+ GRW DA I K ++ +++ GFS
Sbjct: 632 PNNSGAYSAIANVYSACGRWSDAARIWKARKEKAVRKETGFS 673
Score = 191 bits (486), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 128/488 (26%), Positives = 237/488 (48%), Gaps = 37/488 (7%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
+ L + L C+ A + G+++HS + K GL S + NS++N+Y KCG A ++F+
Sbjct: 164 QFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFE 223
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+ N M+S R++ A +F+ P + VS+ +MI G+ QN +AL++
Sbjct: 224 RMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKL 283
Query: 143 F-RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYC 201
F R + + P+E T+ SV+S+ +LG + + +H +++ + ++ L++ Y
Sbjct: 284 FSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYA 343
Query: 202 VCSSLVEARSLFDEMKER--NIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMI 259
S+ AR + D+ E N++S+ +L G+ K G +E ARE+F + ++DVV+W MI
Sbjct: 344 KSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMI 403
Query: 260 DGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFD 319
GY Q R EA+ ++R+M+ G PN + ++S C G QIH +++ +
Sbjct: 404 VGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLE 463
Query: 320 CYDFIQATIIHFYAACGRINLARLQF-ELGIKDHIASWNALIAGFIRNGMIEDARQLFNN 378
+ II YA G AR F ++ + +W ++I ++G E+
Sbjct: 464 QSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEE------- 516
Query: 379 MQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG 438
A+ LF M+ AGV+P+ IT V V A + +G + EG
Sbjct: 517 ------------------------AVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEG 552
Query: 439 RWAHEYVLN-NSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGL 497
+ ++ + N + I + A ++D+ A+ G + A E + +++ W +++
Sbjct: 553 KRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAIA-WGSLLSAC 611
Query: 498 AMHGDANL 505
+H +A L
Sbjct: 612 RVHKNAEL 619
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 98/406 (24%), Positives = 184/406 (45%), Gaps = 55/406 (13%)
Query: 293 LISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFY-----AACGRINLARLQFEL 347
L+ C A G G IH+ VKAG ++ ++ +Y A G + RL E+
Sbjct: 32 LLQLCQTAANPGAGRAIHARAVKAGLLASAYLCNNLLSYYGETAGGAGGLRDARRLFDEI 91
Query: 348 GI-KDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALEL 406
+ + ++ +WN+L++ F ++G + DAR +F M +RD SW+ M+ G + + A++
Sbjct: 92 PLARRNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKT 151
Query: 407 FHGMVDAGVKPNEITMVSVF--CAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMY 464
M G P + T+ +V CA+ +G + GR H +V+ + ++ ++++MY
Sbjct: 152 LLDMTADGFTPTQFTLTNVLSSCAVTQAGAV--GRKVHSFVVKLGLGSCVPVANSVLNMY 209
Query: 465 AKCGSINTAFEVFYHIRDRTT-----------------------------SVSPWNAIIC 495
KCG TA VF + R+ S+ WNA+I
Sbjct: 210 GKCGDSETATTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIA 269
Query: 496 GLAMHGDANLTLKIYSD-LEKRNIKLNSITFIGVLSTCCHAGLVDLGER---YFKSMKSV 551
G +G LK++S L + ++ + T VLS C + G V +G++ Y +
Sbjct: 270 GYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMA 329
Query: 552 YNVEPDLKHYGCMVDLLGRAGQLEDAEEVI-RSMPMKADVVIWGTLLAASRIHGNVEVGE 610
YN + ++ ++G +E+A ++ +SM +V+ + LL G V++G+
Sbjct: 330 YNSQVT----NALISTYAKSGSVENARRIMDQSMETDLNVISFTALL-----EGYVKIGD 380
Query: 611 -RAAKSLAGLQPSHG-PSRVLLSNIYADAGRWEDAFSIRKEMRDCG 654
+A+ + G+ + + + Y GR ++A + + M CG
Sbjct: 381 MESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCG 426
>gi|242032827|ref|XP_002463808.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
gi|241917662|gb|EER90806.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
Length = 803
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 215/632 (34%), Positives = 354/632 (56%), Gaps = 10/632 (1%)
Query: 40 SQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGL----ISQAKSMFDSC--STLDPVACN 93
S G+ IH+ K+GL + ++ N+L++ YA+ G+ +A+ +FD + + N
Sbjct: 42 SAGRAIHAHAVKAGLLVSAYLCNNLLSYYARAGVGRGCFHEARRLFDDIPYARRNAFTWN 101
Query: 94 IMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIP 153
++S Y ++ RL DAR VF + P + VS+T M++G + + +A++ F DM G+ P
Sbjct: 102 SLLSMYAKSGRLADARVVFAQMPERDAVSWTVMVVGLNRAGRFWDAVKTFLDMVGEGLAP 161
Query: 154 NEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLF 213
++ L +V+SS R +H VIKL + V ++ ++L MY C AR++F
Sbjct: 162 SQFMLTNVLSSCAATEARGIGRKVHSFVIKLGLSSCVPVANSVLYMYGKCGDAETARAVF 221
Query: 214 DEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALT 273
+ MK R+ SWN M++ + G ++LA +FE + + +VSW +I GY Q AL
Sbjct: 222 ERMKVRSESSWNAMVSLYTHQGRMDLALSMFENMEERSIVSWNAIIAGYNQNGLDDMALK 281
Query: 274 MYRAML-CDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFY 332
+ ML + P++ + ++SAC G Q+HS I++ G I +I Y
Sbjct: 282 FFSRMLTASSMEPDEFTVTSVLSACANLRMLKMGKQMHSYILRTGMPYSSQIMNALISTY 341
Query: 333 AACGRINLARLQFELGIKD--HIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAM 390
A G + AR + + ++ S+ AL+ G+++ G + AR++F+ M RDV +W+AM
Sbjct: 342 AKSGSVETARRIMDKAVVADLNVISFTALLEGYVKLGDTKQAREVFDVMNNRDVIAWTAM 401
Query: 391 ISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSI 450
I GY QN Q + A+ELF M+ +G +PN T+ +V A AS L G+ H + +
Sbjct: 402 IVGYEQNGQNDEAMELFRSMIRSGPEPNSHTLAAVLSACASLAYLGYGKQIHCRAIRSLQ 461
Query: 451 TLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIY 510
+ ++S AII +YA+ GS+ A VF I R +V+ W ++I LA HG + ++
Sbjct: 462 EQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETVT-WTSMIVALAQHGLGEQAIVLF 520
Query: 511 SDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGR 570
++ + +K + +T+IGV S C HAG +D G+RY++ M + + + P++ HY CMVDLL R
Sbjct: 521 EEMLRVGVKPDRVTYIGVFSACTHAGFIDKGKRYYEQMLNEHGIVPEMSHYACMVDLLAR 580
Query: 571 AGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLL 630
AG L +A E I+ MP+ D V+WG+LLAA R+ N ++ E AA+ L + P + + L
Sbjct: 581 AGLLTEAHEFIQRMPVAPDTVVWGSLLAACRVRKNADLAELAAEKLLSIDPDNSGAYSAL 640
Query: 631 SNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
+N+Y+ GRW DA I K +D +K+ GFS
Sbjct: 641 ANVYSACGRWNDAARIWKLRKDKAVKKETGFS 672
Score = 185 bits (469), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 126/488 (25%), Positives = 236/488 (48%), Gaps = 37/488 (7%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
+ L + L C+A A G+++HS + K GL S + NS++ +Y KCG A+++F+
Sbjct: 163 QFMLTNVLSSCAATEARGIGRKVHSFVIKLGLSSCVPVANSVLYMYGKCGDAETARAVFE 222
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+ N M+S Y R++ A +F+ + VS+ ++I G+ QN AL+
Sbjct: 223 RMKVRSESSWNAMVSLYTHQGRMDLALSMFENMEERSIVSWNAIIAGYNQNGLDDMALKF 282
Query: 143 FRDMRILGVI-PNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYC 201
F M + P+E T+ SV+S+ +L + + +H +++ + I L++ Y
Sbjct: 283 FSRMLTASSMEPDEFTVTSVLSACANLRMLKMGKQMHSYILRTGMPYSSQIMNALISTYA 342
Query: 202 VCSSLVEARSLFDE--MKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMI 259
S+ AR + D+ + + N++S+ +L G+ K G + ARE+F+ + ++DV++W MI
Sbjct: 343 KSGSVETARRIMDKAVVADLNVISFTALLEGYVKLGDTKQAREVFDVMNNRDVIAWTAMI 402
Query: 260 DGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFD 319
GY Q + EA+ ++R+M+ G PN + ++SAC G G QIH +++ +
Sbjct: 403 VGYEQNGQNDEAMELFRSMIRSGPEPNSHTLAAVLSACASLAYLGYGKQIHCRAIRSLQE 462
Query: 320 CYDFIQATIIHFYAACGRINLARLQF-ELGIKDHIASWNALIAGFIRNGMIEDARQLFNN 378
+ II YA G + LAR F ++ + +W ++I ++G+ E
Sbjct: 463 QSVSVSNAIITVYARSGSVPLARRVFDQICWRKETVTWTSMIVALAQHGLGEQ------- 515
Query: 379 MQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG 438
A+ LF M+ GVKP+ +T + VF A +G + +G
Sbjct: 516 ------------------------AIVLFEEMLRVGVKPDRVTYIGVFSACTHAGFIDKG 551
Query: 439 RWAHEYVLN-NSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGL 497
+ +E +LN + I + A ++D+ A+ G + A E + +V W +++
Sbjct: 552 KRYYEQMLNEHGIVPEMSHYACMVDLLARAGLLTEAHEFIQRMPVAPDTVV-WGSLLAAC 610
Query: 498 AMHGDANL 505
+ +A+L
Sbjct: 611 RVRKNADL 618
>gi|147798405|emb|CAN70142.1| hypothetical protein VITISV_032085 [Vitis vinifera]
Length = 748
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 231/659 (35%), Positives = 340/659 (51%), Gaps = 74/659 (11%)
Query: 2 PLDHFHSVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQ 61
P HF + LQN L L+S + + +QIHS I K+GL + F
Sbjct: 15 PTLHFQPTSDPPYKLLQNHP-SLTLLSTCK------SFQNLKQIHSQIIKTGLHNTQFAL 67
Query: 62 NSLINLYA--KCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKC 119
+ LI A G +S A +F+S + N MI G +P+
Sbjct: 68 SKLIEFCAISPFGNLSYALLLFESIEQPNQFIWNTMIRG-----------NSLSSSPVG- 115
Query: 120 CVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHG 179
A++ + M + GV PN T ++ S +G E + +HG
Sbjct: 116 -------------------AIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQIHG 156
Query: 180 LVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVEL 239
V+KL ++ + T+L+NMY L A +F + R+ VS+ ++ G+ G ++
Sbjct: 157 HVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLDD 216
Query: 240 ARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGR 299
AR LFE IP +D VSW MI GY Q R EAL ++ M +APN+ +V ++SAC +
Sbjct: 217 ARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACAQ 276
Query: 300 AMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNAL 359
+ + G + S I G + +I Y+ CG ++ AR FE + I SWN +
Sbjct: 277 SGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNVM 336
Query: 360 IAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNE 419
I G+ ++A LF MQ+ + V+PN+
Sbjct: 337 IGGYSHMNSYKEALALFRKMQQSN-------------------------------VEPND 365
Query: 420 ITMVSVFCAIASSGTLKEGRWAHEYVLNNSITL-NDNLSAAIIDMYAKCGSINTAFEVFY 478
+T VS+ A A G L G+W H Y+ + L N +L ++IDMYAKCG+I A +VF
Sbjct: 366 VTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFA 425
Query: 479 HIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLV 538
++ + S+ WNA+I GLAMHG AN+ L+++ + + + ITF+GVLS C HAGLV
Sbjct: 426 GMKPK--SLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLV 483
Query: 539 DLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLA 598
+LG + F SM Y++ P L+HYGCM+DLLGRAG ++AE ++++M MK D IWG+LL
Sbjct: 484 ELGRQCFSSMVEDYDISPKLQHYGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLLG 543
Query: 599 ASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKR 657
A R+HGNVE+GE AAK L L+P + + VLLSNIYA AGRW+D IR ++ D GMK+
Sbjct: 544 ACRVHGNVELGEFAAKHLFELEPENPGAYVLLSNIYATAGRWDDVARIRTKLNDKGMKK 602
>gi|296087629|emb|CBI34885.3| unnamed protein product [Vitis vinifera]
Length = 728
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 221/675 (32%), Positives = 364/675 (53%), Gaps = 34/675 (5%)
Query: 22 YELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKC---------- 71
Y VS L+ S ++QG +H+ + K+G S +I L+ LY C
Sbjct: 20 YAQTCVSLLKKFSNQGLITQGNVLHAHLIKTGFSSQRYIAIKLLILYLNCRKFAEIDQIV 79
Query: 72 ---------------------GLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDARE 110
G + QA+ +FD + V+ + +ISG ++ R+ ++
Sbjct: 80 KEFDGSDLVVSNCMISAYVQWGNLVQARLLFDEMPERNEVSWSALISGLMKYGRVEESMW 139
Query: 111 VFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGG 170
F++ P + VS+T+ I GF +N EAL++F + GV PN+VT SV+ + LG
Sbjct: 140 YFERNPFQNVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELGD 199
Query: 171 IWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNG 230
+ GLV+K + ++ +S +L+ + + AR +FD M++R++VSW +L+
Sbjct: 200 FGLGMSILGLVVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAILDA 259
Query: 231 FAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMI 290
+ + G + AR +F+ +P ++ +SW MI Y Q EAL ++ M+ +G PN
Sbjct: 260 YVETGDLREARRIFDEMPERNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNISCF 319
Query: 291 VDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIK 350
+SA A G+ IH + K G D FI +++I Y CG+ + RL F+L ++
Sbjct: 320 ACTLSALASLRALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDLILE 379
Query: 351 DHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGM 410
++ WN+++ G+ NG +E+ +LF + +++ SW +I+GY +NEQ LE+F+ +
Sbjct: 380 KNVVCWNSMVGGYSINGRLEETEELFELIPEKNDVSWGTIIAGYLENEQCEKVLEVFNTL 439
Query: 411 VDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSI 470
+ +G PN+ T SV CA AS +L +G H ++ I + + A+ DMYAKCG I
Sbjct: 440 LVSGQTPNKSTFSSVLCACASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAKCGDI 499
Query: 471 NTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRN-IKLNSITFIGVL 529
++ +VF + ++ W +I GLA G A +L ++ ++E+ + + N + + VL
Sbjct: 500 GSSKQVFERMPEKNE--ISWTVMIQGLAESGFAVESLILFEEMERTSEVAPNELMLLSVL 557
Query: 530 STCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKAD 589
C H GLVD G YF SM+ VY ++P KHY C+VDLL R+G+L +AEE IR++P + +
Sbjct: 558 FACSHCGLVDKGLWYFNSMEKVYGIKPKGKHYTCVVDLLSRSGRLYEAEEFIRTIPFQPE 617
Query: 590 VVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKE 649
W LL+ + + + ++ ER AK L L ++ VLLSNIYA AGRW D +IRK
Sbjct: 618 ANAWAALLSGCKKYKDEKIAERTAKKLWQLAENNSAGYVLLSNIYASAGRWIDVSNIRKL 677
Query: 650 MRDCGMKRLPGFSGV 664
MR+ G+K+ G S V
Sbjct: 678 MREKGLKKSGGCSWV 692
>gi|147859209|emb|CAN83551.1| hypothetical protein VITISV_001173 [Vitis vinifera]
Length = 728
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 220/675 (32%), Positives = 364/675 (53%), Gaps = 34/675 (5%)
Query: 22 YELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKC---------- 71
Y VS L+ S ++QG +H+ + K+G S +I L+ LY C
Sbjct: 20 YAQTCVSLLKKFSNQGLITQGNVLHAHLIKTGFSSQRYIAIKLLILYLNCRKFAEIDQIV 79
Query: 72 ---------------------GLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDARE 110
G + QA+ +FD + V+ + +ISG ++ R+ ++
Sbjct: 80 KEFDGSDLVVSNCMISAYVQWGNLVQARLLFDEMPERNEVSWSALISGLMKYGRVEESMW 139
Query: 111 VFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGG 170
F++ P + VS+T+ I GF +N EAL++F + GV PN+VT SV+ + LG
Sbjct: 140 YFERNPFQNVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELGD 199
Query: 171 IWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNG 230
+ GLV+K + ++ +S +L+ + + AR +FD M++R++VSW +L+
Sbjct: 200 FGLGMSILGLVVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAILDA 259
Query: 231 FAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMI 290
+ + G + AR +F+ +P ++ +SW MI Y Q EAL ++ M+ +G PN
Sbjct: 260 YVETGDLREARRIFDEMPERNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNISCF 319
Query: 291 VDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIK 350
+SA A G+ IH + K G D FI +++I Y CG+ + RL F+L ++
Sbjct: 320 ACTLSALASLRALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDLILE 379
Query: 351 DHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGM 410
++ WN+++ G+ NG +E+ +LF + +++ SW +J+GY +NEQ LE+F+ +
Sbjct: 380 KNVVCWNSMVGGYSINGRLEEXEELFELIPEKNDXSWGTIJAGYLENEQCEKVLEVFNTL 439
Query: 411 VDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSI 470
+ +G PN+ T SV CA AS +L +G H ++ I + + A+ DMYAKCG I
Sbjct: 440 LVSGQTPNKSTFSSVLCACASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAKCGDI 499
Query: 471 NTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRN-IKLNSITFIGVL 529
++ +VF + ++ W +I GLA G A +L ++ ++E+ + + N + + VL
Sbjct: 500 GSSKQVFERMPEKNE--ISWTVMIQGLAESGFAVESLILFEEMERTSEVAPNELMLLSVL 557
Query: 530 STCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKAD 589
C H GLVD G YF SM+ VY ++P KHY C+VDLL R+G+L +AEE IR++P + +
Sbjct: 558 FACSHCGLVDKGLWYFNSMEKVYGIKPKGKHYTCVVDLLSRSGRLYEAEEFIRTIPFQPE 617
Query: 590 VVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKE 649
W LL+ + + + ++ ER AK L L ++ VLLSNIYA AGRW D +IRK
Sbjct: 618 ANAWAALLSGCKKYKDEKIAERTAKKLWQLAENNSAGYVLLSNIYASAGRWIDVSNIRKL 677
Query: 650 MRDCGMKRLPGFSGV 664
MR+ G+K+ G S V
Sbjct: 678 MREKGLKKSGGCSWV 692
>gi|347954530|gb|AEP33765.1| organelle transcript processing 82, partial [Lepidium sativum]
Length = 672
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 208/564 (36%), Positives = 314/564 (55%), Gaps = 35/564 (6%)
Query: 103 DRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVI 162
D L+ A +F+ + + +M G A N AL+++ M LG++PN + ++
Sbjct: 13 DGLSYAISIFETIQEPNLLIWNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFLL 72
Query: 163 SSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIV 222
S + E + +HG V+KL D + ++T+L++MY L +A +FD R++V
Sbjct: 73 KSCAKSKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHVV 132
Query: 223 SWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDG 282
S+ ++ G+A G + AR+LF+ I KDVVSW MI GY++ EAL +Y+ M+
Sbjct: 133 SYTALITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTN 192
Query: 283 IAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLAR 342
+ P++ +V ++SAC ++ + G Q+HS I GF I +I Y+ CG +
Sbjct: 193 VKPDESTMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEV---- 248
Query: 343 LQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNM 402
E A LF + K+DV SW+ +I G+
Sbjct: 249 ---------------------------ETACGLFQGLAKKDVISWNTLIGGHTHMNLYKE 281
Query: 403 ALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLN--NSITLNDNLSAAI 460
AL LF M+ +G PN++TM+SV A A G + GRW H Y+ +T +L ++
Sbjct: 282 ALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYINKRLKGVTNASSLLTSL 341
Query: 461 IDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKL 520
IDMYAKCG I A +VF + R S+S WNA+I G AMHG AN ++S + K I
Sbjct: 342 IDMYAKCGDIEAAKQVFDSMLTR--SLSSWNAMIFGFAMHGKANAAFDLFSKMRKNGIDP 399
Query: 521 NSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEV 580
+ ITF+G+LS C H+G++DLG F+SM Y + P L+HYGCM+DLLG G ++A+E+
Sbjct: 400 DDITFVGLLSACSHSGMLDLGRHIFRSMSQDYKITPKLEHYGCMIDLLGHCGLFKEAKEM 459
Query: 581 IRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRW 640
IR+MPM+ D VIW +LL A ++H NVE+GE A++L ++P + S VLLSNIYA AGRW
Sbjct: 460 IRTMPMEPDGVIWCSLLKACKMHNNVELGESYAQNLIKIEPENPGSYVLLSNIYATAGRW 519
Query: 641 EDAFSIRKEMRDCGMKRLPGFSGV 664
+ IR + D G+K+ PG S +
Sbjct: 520 DQVAKIRTLLNDKGIKKAPGCSSI 543
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 133/483 (27%), Positives = 217/483 (44%), Gaps = 74/483 (15%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
L+ C+ A+ +GQQIH + K G + + ++ SLI++YA+ G + A +FD S
Sbjct: 72 LKSCAKSKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHV 131
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
V+ +I+GY +N+AR++FD+ +K VS+ +MI G+ + ++EALE+++DM
Sbjct: 132 VSYTALITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKT 191
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
V P+E T+ +V+S+ G I R LH + + I L+++Y C + A
Sbjct: 192 NVKPDESTMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETA 251
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLS 269
LF + +++++SWN T+I G+ +
Sbjct: 252 CGLFQGLAKKDVISWN-------------------------------TLIGGHTHMNLYK 280
Query: 270 EALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVK--AGFDCYDFIQAT 327
EAL +++ ML G +PNDV ++ ++ AC A G IH I K G + +
Sbjct: 281 EALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYINKRLKGVTNASSLLTS 340
Query: 328 IIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSW 387
+I YA CG I A+ F+ + ++SWNA+I GF +G
Sbjct: 341 LIDMYAKCGDIEAAKQVFDSMLTRSLSSWNAMIFGFAMHG-------------------- 380
Query: 388 SAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLN 447
+ N A +LF M G+ P++IT V + A + SG L GR +
Sbjct: 381 -----------KANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDLGRHIFRSMSQ 429
Query: 448 N-SITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGL----AMHGD 502
+ IT +ID+ CG A E+ RT + P I C L MH +
Sbjct: 430 DYKITPKLEHYGCMIDLLGHCGLFKEAKEMI-----RTMPMEPDGVIWCSLLKACKMHNN 484
Query: 503 ANL 505
L
Sbjct: 485 VEL 487
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 128/289 (44%), Gaps = 64/289 (22%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E +V+ + C+ ++ G+Q+HS I G SN I N LI+LY+KCG + A +F
Sbjct: 197 ESTMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETACGLFQ 256
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+ D ++ N +I G +T M + ++EAL +
Sbjct: 257 GLAKKDVISWNTLIGG------------------------HTHM-------NLYKEALLL 285
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLM--IDGFVIISTNLLNMY 200
F++M G PN+VT+ SV+ + HLG I R +H + K + + + T+L++MY
Sbjct: 286 FQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYINKRLKGVTNASSLLTSLIDMY 345
Query: 201 CVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMID 260
C + A+ +FD M R++ SWN M+ GFA G A +LF +
Sbjct: 346 AKCGDIEAAKQVFDSMLTRSLSSWNAMIFGFAMHGKANAAFDLFSK-------------- 391
Query: 261 GYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQI 309
M +GI P+D+ V L+SAC + G I
Sbjct: 392 -----------------MRKNGIDPDDITFVGLLSACSHSGMLDLGRHI 423
>gi|224141765|ref|XP_002324235.1| predicted protein [Populus trichocarpa]
gi|222865669|gb|EEF02800.1| predicted protein [Populus trichocarpa]
Length = 736
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 226/627 (36%), Positives = 328/627 (52%), Gaps = 69/627 (11%)
Query: 43 QQIHSLIFKSGLESNTFIQNSLINLYA--KCGLISQAKSMFDSCSTLDPVACNIMISGYI 100
+QIHS I K+GL + F + LI A G +S A S+F + I
Sbjct: 45 KQIHSQIIKTGLHNTHFALSKLIEFCAVSPHGDLSYALSLFKT----------------I 88
Query: 101 RNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLAS 160
RN V + MI G + ++ ALE + M G PNE T S
Sbjct: 89 RNPN---------------HVIWNHMIRGLSSSESPFLALEYYVHMISSGTEPNEYTFPS 133
Query: 161 VISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERN 220
+ S + G E + +H V+KL ++ + T+L+NMY LV AR +FD+ R+
Sbjct: 134 IFKSCTKIRGAHEGKQVHAHVLKLGLEHNAFVHTSLINMYAQNGELVNARLVFDKSSMRD 193
Query: 221 IVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLC 280
VS+ ++ G+A G ++ ARELF+ IP +DVVSW MI GY Q R+ EA+ + M
Sbjct: 194 AVSFTALITGYASKGFLDEARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRR 253
Query: 281 DGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINL 340
+ PN ++ ++SAC ++ G LQ+ N
Sbjct: 254 AKVTPNVSTMLSVLSACAQS---GSSLQLG----------------------------NW 282
Query: 341 ARLQFE-LGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQ 399
R E G+ +I N LI +++ G +E+A LF +Q ++V SW+ MI GY
Sbjct: 283 VRSWIEDRGLGSNIRLVNGLIDMYVKCGDLEEASNLFEKIQDKNVVSWNVMIGGYTHMSC 342
Query: 400 PNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLS-- 457
AL LF M+ + + PN++T +S+ A A+ G L G+W H YV N ++ + ++
Sbjct: 343 YKEALGLFRRMMQSNIDPNDVTFLSILPACANLGALDLGKWVHAYVDKNMKSMKNTVALW 402
Query: 458 AAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRN 517
++IDMYAKCG + A +F + T S++ WNA+I G AMHG + L ++S +
Sbjct: 403 TSLIDMYAKCGDLAVAKRIFDCMN--TKSLATWNAMISGFAMHGHTDTALGLFSRMTSEG 460
Query: 518 IKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDA 577
+ ITF+GVL+ C HAGL+ LG RYF SM Y V P L HYGCM+DL GRAG ++A
Sbjct: 461 FVPDDITFVGVLTACKHAGLLSLGRRYFSSMIQDYKVSPKLPHYGCMIDLFGRAGLFDEA 520
Query: 578 EEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADA 637
E ++++M MK D IW +LL A RIH +E+ E AK L L+P + + VLLSNIYA A
Sbjct: 521 ETLVKNMEMKPDGAIWCSLLGACRIHRRIELAESVAKHLFELEPENPSAYVLLSNIYAGA 580
Query: 638 GRWEDAFSIRKEMRDCGMKRLPGFSGV 664
GRWED IR + D MK++PG S +
Sbjct: 581 GRWEDVAKIRTRLNDNRMKKVPGCSSI 607
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 138/488 (28%), Positives = 221/488 (45%), Gaps = 89/488 (18%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E S + C+ +G+Q+H+ + K GLE N F+ SLIN+YA+ G + A+ +FD
Sbjct: 128 EYTFPSIFKSCTKIRGAHEGKQVHAHVLKLGLEHNAFVHTSLINMYAQNGELVNARLVFD 187
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
S D V+ +I+GY L++ARE+FD+ P++ VS+ +MI G+AQ+ EA+
Sbjct: 188 KSSMRDAVSFTALITGYASKGFLDEARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAF 247
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLG-----GIW-----ECRMLHGLVIKLMIDGFVII 192
F +MR V PN T+ SV+S+ G G W E R L G I+L+
Sbjct: 248 FEEMRRAKVTPNVSTMLSVLSACAQSGSSLQLGNWVRSWIEDRGL-GSNIRLV------- 299
Query: 193 STNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDV 252
L++MY C L EA +LF++++++N+VSWNVM
Sbjct: 300 -NGLIDMYVKCGDLEEASNLFEKIQDKNVVSWNVM------------------------- 333
Query: 253 VSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSI 312
I GY + EAL ++R M+ I PNDV + ++ AC A G +H+
Sbjct: 334 ------IGGYTHMSCYKEALGLFRRMMQSNIDPNDVTFLSILPACANLGALDLGKWVHAY 387
Query: 313 IVKAGFDCYDFIQ--ATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIE 370
+ K + + ++I YA CG + +A+ F+ +A+WNA+I+GF +G
Sbjct: 388 VDKNMKSMKNTVALWTSLIDMYAKCGDLAVAKRIFDCMNTKSLATWNAMISGFAMHG--- 444
Query: 371 DARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIA 430
+ AL LF M G P++IT V V A
Sbjct: 445 ----------------------------HTDTALGLFSRMTSEGFVPDDITFVGVLTACK 476
Query: 431 SSGTLKEG-RWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSP 489
+G L G R+ + + ++ +ID++ + G + A + + + P
Sbjct: 477 HAGLLSLGRRYFSSMIQDYKVSPKLPHYGCMIDLFGRAGLFDEAETLV-----KNMEMKP 531
Query: 490 WNAIICGL 497
AI C L
Sbjct: 532 DGAIWCSL 539
>gi|359488823|ref|XP_002273685.2| PREDICTED: uncharacterized protein LOC100245824 [Vitis vinifera]
Length = 1984
Score = 380 bits (977), Expect = e-102, Method: Compositional matrix adjust.
Identities = 222/675 (32%), Positives = 366/675 (54%), Gaps = 34/675 (5%)
Query: 22 YELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKC---------- 71
Y VS L+ S ++QG +H+ + K+G S +I L+ LY C
Sbjct: 20 YAQTCVSLLKKFSNQGLITQGNVLHAHLIKTGFSSQRYIAIKLLILYLNCRKFAEIDQIV 79
Query: 72 ---------------------GLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDARE 110
G + QA+ +FD + V+ + +ISG ++ R+ ++
Sbjct: 80 KEFDGSDLVVSNCMISAYVQWGNLVQARLLFDEMPERNEVSWSALISGLMKYGRVEESMW 139
Query: 111 VFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGG 170
F++ P + VS+T+ I GF +N EAL++F + GV PN+VT SV+ + LG
Sbjct: 140 YFERNPFQNVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVRACGELGD 199
Query: 171 IWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNG 230
+ GLV+K + ++ +S +L+ + + AR +FD M++R++VSW +L+
Sbjct: 200 FGLGMSILGLVVKAGFEHYLSVSNSLITLSLRMGEIDLARRVFDRMEKRDVVSWTAILDA 259
Query: 231 FAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMI 290
+ + G + AR +F+ +P ++ +SW MI Y Q EAL ++ M+ +G PN
Sbjct: 260 YVETGDLREARRIFDEMPERNEISWSAMIARYSQSGYAEEALKLFSKMVQEGFKPNISCF 319
Query: 291 VDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIK 350
+SA A G+ IH + K G D FI +++I Y CG+ + RL F+L ++
Sbjct: 320 ACTLSALASLRALSAGINIHGHVTKIGIDKDVFIGSSLIDLYCKCGKPDDGRLVFDLILE 379
Query: 351 DHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGM 410
++ WN+++ G+ NG +E+ +LF + +++ SW +I+GY +NEQ LE+F+ +
Sbjct: 380 KNVVCWNSMVGGYSINGRLEETEELFELIPEKNDVSWGTIIAGYLENEQCEKVLEVFNTL 439
Query: 411 VDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSI 470
+ +G PN+ T SV CA AS +L +G H ++ I + + A+ DMYAKCG I
Sbjct: 440 LVSGQTPNKSTFSSVLCACASIASLDKGMNVHGKIIKLGIQYDIFVGTALTDMYAKCGDI 499
Query: 471 NTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRN-IKLNSITFIGVL 529
++ +VF + ++ +S W +I GLA G A +L ++ ++E+ + + N + + VL
Sbjct: 500 GSSKQVFERMPEK-NEIS-WTVMIQGLAESGFAVESLILFEEMERTSEVAPNELMLLSVL 557
Query: 530 STCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKAD 589
C H GLVD G YF SM+ VY ++P KHY C+VDLL R+G+L +AEE IR++P + +
Sbjct: 558 FACSHCGLVDKGLWYFNSMEKVYGIKPKGKHYTCVVDLLSRSGRLYEAEEFIRTIPFQPE 617
Query: 590 VVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKE 649
W LL+ + + + ++ ER AK L L ++ VLLSNIYA AGRW D +IRK
Sbjct: 618 ANAWAALLSGCKKYKDEKIAERTAKKLWQLAENNSAGYVLLSNIYASAGRWIDVSNIRKL 677
Query: 650 MRDCGMKRLPGFSGV 664
MR+ G+K+ G S V
Sbjct: 678 MREKGLKKSGGCSWV 692
>gi|347954536|gb|AEP33768.1| organelle transcript processing 82, partial [Nasturtium officinale]
Length = 670
Score = 380 bits (976), Expect = e-102, Method: Compositional matrix adjust.
Identities = 209/559 (37%), Positives = 312/559 (55%), Gaps = 35/559 (6%)
Query: 108 AREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVH 167
A VF+ + + +M G A + AL+++ M LG++PN T ++ S
Sbjct: 16 AISVFETIQEPNLLIWNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAK 75
Query: 168 LGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVM 227
L E +HG V+KL + + + T+L++MY L +A +FD R++VS+ +
Sbjct: 76 LKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDVVSYTAL 135
Query: 228 LNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPND 287
+ G+A G +E AR +F+ IP KDVVSW MI GY++ EAL +++ M+ + P++
Sbjct: 136 VTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTNVRPDE 195
Query: 288 VMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFEL 347
+V +ISA R+ + G Q+HS I GF I +I FY+ CG +
Sbjct: 196 STMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEM--------- 246
Query: 348 GIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELF 407
E A LF + +DV SW+ +I GY AL LF
Sbjct: 247 ----------------------ETACGLFLGLSYKDVISWNILIGGYTHLNLYKEALLLF 284
Query: 408 HGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLN--NSITLNDNLSAAIIDMYA 465
M+ +G PN++TM+S+ A A G + GRW H Y+ +T +L ++IDMY+
Sbjct: 285 QEMLRSGESPNDVTMLSILHACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYS 344
Query: 466 KCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITF 525
KCG I A +VF + + S+ WNA+I G AMHG AN I+S + K IK + ITF
Sbjct: 345 KCGDIEAAHQVFNSMLHK--SLPAWNAMIFGFAMHGRANAAFDIFSRMRKNEIKPDDITF 402
Query: 526 IGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMP 585
+G+LS C HAG++DLG F+SM Y + P L+HYGCM+DLLG +G ++AEE+I +M
Sbjct: 403 VGLLSACSHAGMLDLGRHIFRSMTHNYKITPKLEHYGCMIDLLGHSGLFKEAEEMISTMT 462
Query: 586 MKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFS 645
M+ D VIW +LL A ++HGNVE+GE+ A++L ++P++ S VLLSNIYA AGRW +
Sbjct: 463 MEPDGVIWCSLLKACKMHGNVELGEKFAQNLFKIEPNNPGSYVLLSNIYATAGRWNEVAR 522
Query: 646 IRKEMRDCGMKRLPGFSGV 664
IR + D GMK++PG S +
Sbjct: 523 IRGLLNDKGMKKVPGCSSI 541
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 131/493 (26%), Positives = 215/493 (43%), Gaps = 74/493 (15%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
L+ C+ A +G QIH + K G E + ++ SLI++Y + + A +FD S D
Sbjct: 70 LKSCAKLKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDV 129
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
V+ +++GY + AR +FD+ P+K VS+ +MI G+ + ++EALE+F++M
Sbjct: 130 VSYTALVTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKT 189
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
V P+E T+ +VIS+S G I R +H + + I L++ Y C + A
Sbjct: 190 NVRPDESTMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMETA 249
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLS 269
LF + ++++SWN++ I GY +
Sbjct: 250 CGLFLGLSYKDVISWNIL-------------------------------IGGYTHLNLYK 278
Query: 270 EALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVK--AGFDCYDFIQAT 327
EAL +++ ML G +PNDV ++ ++ AC A G IH I K G ++ +
Sbjct: 279 EALLLFQEMLRSGESPNDVTMLSILHACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTS 338
Query: 328 IIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSW 387
+I Y+ CG I A F + + +WNA+I GF +G A +F+ M+K +
Sbjct: 339 LIDMYSKCGDIEAAHQVFNSMLHKSLPAWNAMIFGFAMHGRANAAFDIFSRMRKNE---- 394
Query: 388 SAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLN 447
+KP++IT V + A + +G L GR + +
Sbjct: 395 ---------------------------IKPDDITFVGLLSACSHAGMLDLGRHIFRSMTH 427
Query: 448 N-SITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGL----AMHGD 502
N IT +ID+ G A E+ T ++ P I C L MHG+
Sbjct: 428 NYKITPKLEHYGCMIDLLGHSGLFKEAEEMI-----STMTMEPDGVIWCSLLKACKMHGN 482
Query: 503 ANLTLKIYSDLEK 515
L K +L K
Sbjct: 483 VELGEKFAQNLFK 495
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 124/289 (42%), Gaps = 64/289 (22%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E +V+ + + ++ G+Q+HS I G SN I N+LI+ Y+KCG + A +F
Sbjct: 195 ESTMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMETACGLFL 254
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
S D ++ NI+I GY + ++EAL +
Sbjct: 255 GLSYKDVISWNILIGGY-------------------------------THLNLYKEALLL 283
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLM--IDGFVIISTNLLNMY 200
F++M G PN+VT+ S++ + HLG I R +H + K + + + T+L++MY
Sbjct: 284 FQEMLRSGESPNDVTMLSILHACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMY 343
Query: 201 CVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMID 260
C + A +F+ M +++ +WN M+ GFA G A ++F R+ +
Sbjct: 344 SKCGDIEAAHQVFNSMLHKSLPAWNAMIFGFAMHGRANAAFDIFSRMRKNE--------- 394
Query: 261 GYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQI 309
I P+D+ V L+SAC A G I
Sbjct: 395 ----------------------IKPDDITFVGLLSACSHAGMLDLGRHI 421
>gi|255567371|ref|XP_002524665.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536026|gb|EEF37684.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 2000
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 216/675 (32%), Positives = 362/675 (53%), Gaps = 34/675 (5%)
Query: 22 YELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFI--------------------- 60
Y VS L+ + + G +H+ +FK+G+ S +I
Sbjct: 20 YAQTCVSLLKNLTNQGLIRDGSALHAHLFKTGISSEQYISIKLLIMYLNYRKSAEADQIS 79
Query: 61 ----------QNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDARE 110
N +I+ + G + +A+ +FD + ++ +ISG+++ R+ ++
Sbjct: 80 KDFDGFDLVVHNCMISANVQRGNLDEARKLFDEMPQTNEISWTALISGFMKYGRVRESMW 139
Query: 111 VFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGG 170
F++ P + VS+T+ I G+ QN EA+++F + V PN+VT SV+ + +LG
Sbjct: 140 YFERNPFQNVVSWTAAISGYVQNGFSVEAMKLFIKLLESEVKPNKVTFTSVVRACANLGD 199
Query: 171 IWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNG 230
+ GL++K + + +S +L+ + + AR +FD M+E+++VSW +L+
Sbjct: 200 FGLGMSVLGLIVKTGYEHDLAVSNSLITLCLRMGEIHLAREVFDRMEEKDVVSWTAILDL 259
Query: 231 FAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMI 290
+ + + AR +F+ +P ++ VSW MI Y Q E+L ++ M+ +G PN
Sbjct: 260 YVEMDELGEARRIFDEMPQRNEVSWSAMIARYCQSGYPEESLRLFCRMIQEGFKPNISCF 319
Query: 291 VDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIK 350
++SA A G+ IH + K GF+ F+ +++I Y CG R F+ ++
Sbjct: 320 SSILSALASVEALQAGMNIHGHVTKIGFEKDVFVSSSLIDMYCKCGETKDGRFLFDTILE 379
Query: 351 DHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGM 410
++ SWNA++ G+ NG +E+A+ LFN M R+ SWSA+I+G+ EQ + E+F+ M
Sbjct: 380 KNMVSWNAMVGGYSLNGHMEEAKYLFNIMPVRNNVSWSAIIAGHLDCEQFDEMFEVFNEM 439
Query: 411 VDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSI 470
+ G PN+ T S+ CA AS+ +L +G+ H ++ I + + A+ DMYAK G I
Sbjct: 440 ILLGEIPNKSTFSSLLCACASTASLDKGKNLHGKIVKLGIQCDTYVGTALTDMYAKSGDI 499
Query: 471 NTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEK-RNIKLNSITFIGVL 529
++ +VF + + VS W A+I GLA G A +L ++ ++EK +I N + F+ VL
Sbjct: 500 ESSKKVFNRM-PKKNEVS-WTAMIQGLAESGLAEESLTLFEEMEKTSSIAPNEVMFLAVL 557
Query: 530 STCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKAD 589
C H+GLVD G YF SM++VY ++P +H+ C+VD+L RAG+L +AEE I SMP + +
Sbjct: 558 FACSHSGLVDKGLWYFNSMEAVYGLKPKGRHFTCVVDMLSRAGRLFEAEEFIYSMPFQPE 617
Query: 590 VVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKE 649
W LL+ + + N E+ ER A L + + VLLSNIYA AGRW D +RK
Sbjct: 618 TNAWAALLSGCKTYKNEELAERVAGKLWEMAEKNCAGYVLLSNIYASAGRWRDVLKVRKL 677
Query: 650 MRDCGMKRLPGFSGV 664
M+ G+K+ G S V
Sbjct: 678 MKAKGLKKSGGCSWV 692
>gi|359484390|ref|XP_002281719.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Vitis vinifera]
Length = 662
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 203/566 (35%), Positives = 326/566 (57%), Gaps = 42/566 (7%)
Query: 105 LNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISS 164
L+ A +F+ I Y +I F +N +R+A+ +FR +R G+ P+ T V +
Sbjct: 82 LHYAERIFNYIDIPGLFIYNLVIKAFTKNGSFRKAVLLFRQLREEGLSPDNFTYPFVFKA 141
Query: 165 SVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSW 224
LG + E ++G V+K ++ + +L++MY
Sbjct: 142 IGCLGEVREGEKVYGFVVKSGLEFDTYVCNSLMDMY------------------------ 177
Query: 225 NVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDG-I 283
A+ G V+ R++FE +P +DVVSW +I GY++ R +A+ ++R M +
Sbjct: 178 -------AEVGRVQNLRQVFEEMPQRDVVSWNVLISGYVKCRRYEDAVDVFRRMQQQSSL 230
Query: 284 APNDVMIVDLISACGRAMAFGEGLQIHSIIVKA-GFDCYDFIQATIIHFYAACGRINLAR 342
PN+ +V +SAC G +IH + + GF I ++ Y CG +++AR
Sbjct: 231 RPNEATVVSTLSACIALKMLELGKEIHRYVREQLGFTIK--IGNALVDMYCKCGHLSIAR 288
Query: 343 LQF-ELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPN 401
F ++ IK I W ++++G++ G +++AR+LF RDV W+AMI+GY Q + +
Sbjct: 289 EIFNDMPIKTVIC-WTSMVSGYVNCGQLDEARELFERSPVRDVVLWTAMINGYVQFNRFD 347
Query: 402 MALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAII 461
A+ LF M V P+ T+V++ A GTL++G+W H Y+ N I ++ + A+I
Sbjct: 348 DAVALFREMQIKRVSPDRFTLVALLTGCAQLGTLEQGKWIHGYIDENKIMIDAVVGTALI 407
Query: 462 DMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLN 521
+MYAKCG I + E+F ++++ T+ W +IICGLAM+G + L++++++ + +K +
Sbjct: 408 EMYAKCGFIEKSLEIFNGLKEKDTA--SWTSIICGLAMNGKTSKALELFAEMVQTGVKPD 465
Query: 522 SITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVI 581
ITFIGVLS C H GLV+ G ++F+SM +VY +EP L+HYGC++DLLGRAGQL++AEE+I
Sbjct: 466 DITFIGVLSACSHGGLVEEGRKHFRSMTAVYQIEPKLEHYGCLIDLLGRAGQLDEAEELI 525
Query: 582 RSMPMKADVVI---WGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAG 638
P + VI +G LL+A R HGNVE+GER AK L G++ LL+NIYA A
Sbjct: 526 EKSPNVNNEVIVPLYGALLSACRTHGNVEMGERVAKRLVGIESGDSSVHTLLANIYASAD 585
Query: 639 RWEDAFSIRKEMRDCGMKRLPGFSGV 664
RWED +R++M+D G+K++PG S V
Sbjct: 586 RWEDVTKVRRKMKDLGVKKVPGCSSV 611
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 146/551 (26%), Positives = 256/551 (46%), Gaps = 106/551 (19%)
Query: 39 VSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISG 98
V +G++++ + KSGLE +T++ NSL+++YA+ G
Sbjct: 148 VREGEKVYGFVVKSGLEFDTYVCNSLMDMYAEVG-------------------------- 181
Query: 99 YIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVI-PNEVT 157
R+ + R+VF++ P + VS+ +I G+ + + +A++VFR M+ + PNE T
Sbjct: 182 -----RVQNLRQVFEEMPQRDVVSWNVLISGYVKCRRYEDAVDVFRRMQQQSSLRPNEAT 236
Query: 158 LASVISSSVHLGGIWECRMLHGLVIKLMIDGFVI-ISTNLLNMYCVCSSLVEARSLFDEM 216
+ S +S+ + L + + +H V + + GF I I L++MYC C L AR +F++M
Sbjct: 237 VVSTLSACIALKMLELGKEIHRYVREQL--GFTIKIGNALVDMYCKCGHLSIAREIFNDM 294
Query: 217 KERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYR 276
+ ++ W M++G+ G ++ ARELFER P +DVV W MI+GY+Q R +A+ ++R
Sbjct: 295 PIKTVICWTSMVSGYVNCGQLDEARELFERSPVRDVVLWTAMINGYVQFNRFDDAVALFR 354
Query: 277 AMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACG 336
M ++P+ +V L++ C + +G IH I + + +I YA CG
Sbjct: 355 EMQIKRVSPDRFTLVALLTGCAQLGTLEQGKWIHGYIDENKIMIDAVVGTALIEMYAKCG 414
Query: 337 RINLARLQFELGIKDH-IASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYA 395
I + L+ G+K+ ASW ++I G NG
Sbjct: 415 FIEKS-LEIFNGLKEKDTASWTSIICGLAMNG---------------------------- 445
Query: 396 QNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDN 455
+ + ALELF MV GVKP++IT + V A + G ++EGR H + +
Sbjct: 446 ---KTSKALELFAEMVQTGVKPDDITFIGVLSACSHGGLVEEGR-KHFRSMTAVYQIEPK 501
Query: 456 LS--AAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDL 513
L +ID+ + G ++ A E+ +++ +V+ N +I L
Sbjct: 502 LEHYGCLIDLLGRAGQLDEAEELI----EKSPNVN--NEVIVPL---------------- 539
Query: 514 EKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQ 573
+ +LS C G V++GER K + + + D + + ++ A +
Sbjct: 540 -----------YGALLSACRTHGNVEMGERVAKRLVGIES--GDSSVHTLLANIYASADR 586
Query: 574 LEDAEEVIRSM 584
ED +V R M
Sbjct: 587 WEDVTKVRRKM 597
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 156/297 (52%), Gaps = 38/297 (12%)
Query: 12 SQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKC 71
Q+++L+ + E +VS L C A + G++IH + + L I N+L+++Y KC
Sbjct: 225 QQQSSLRPN--EATVVSTLSACIALKMLELGKEIHRYV-REQLGFTIKIGNALVDMYCKC 281
Query: 72 GLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFA 131
G +S A+ +F+ + M+SGY+ +L++ARE+F+++P++ V +T+MI G+
Sbjct: 282 GHLSIAREIFNDMPIKTVICWTSMVSGYVNCGQLDEARELFERSPVRDVVLWTAMINGYV 341
Query: 132 QNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVI--KLMIDGF 189
Q + + +A+ +FR+M+I V P+ TL ++++ LG + + + +HG + K+MID
Sbjct: 342 QFNRFDDAVALFREMQIKRVSPDRFTLVALLTGCAQLGTLEQGKWIHGYIDENKIMIDA- 400
Query: 190 VIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPS 249
++ T L+ MY C + ++ +F+ +KE++ SW ++ G A G
Sbjct: 401 -VVGTALIEMYAKCGFIEKSLEIFNGLKEKDTASWTSIICGLAMNG-------------- 445
Query: 250 KDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEG 306
+ S+AL ++ M+ G+ P+D+ + ++SAC EG
Sbjct: 446 -----------------KTSKALELFAEMVQTGVKPDDITFIGVLSACSHGGLVEEG 485
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/401 (19%), Positives = 168/401 (41%), Gaps = 62/401 (15%)
Query: 235 GLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLI 294
G + A +F I + + +I + + +A+ ++R + +G++P++ +
Sbjct: 80 GNLHYAERIFNYIDIPGLFIYNLVIKAFTKNGSFRKAVLLFRQLREEGLSPDNFTYPFVF 139
Query: 295 SACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIA 354
A G EG +++ +VK+G + ++ +++ YA GR+ R FE + +
Sbjct: 140 KAIGCLGEVREGEKVYGFVVKSGLEFDTYVCNSLMDMYAEVGRVQNLRQVFEEMPQRDVV 199
Query: 355 SWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAG 414
SWN LI+G+++ EDA +F MQ++ +
Sbjct: 200 SWNVLISGYVKCRRYEDAVDVFRRMQQQ------------------------------SS 229
Query: 415 VKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAF 474
++PNE T+VS A + L+ G+ H YV + + A++DMY KCG ++ A
Sbjct: 230 LRPNEATVVSTLSACIALKMLELGKEIHRYV-REQLGFTIKIGNALVDMYCKCGHLSIAR 288
Query: 475 EVFYHIRDRT----TSV-------------------SP------WNAIICGLAMHGDANL 505
E+F + +T TS+ SP W A+I G +
Sbjct: 289 EIFNDMPIKTVICWTSMVSGYVNCGQLDEARELFERSPVRDVVLWTAMINGYVQFNRFDD 348
Query: 506 TLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMV 565
+ ++ +++ + + + T + +L+ C G ++ G ++ + D ++
Sbjct: 349 AVALFREMQIKRVSPDRFTLVALLTGCAQLGTLEQG-KWIHGYIDENKIMIDAVVGTALI 407
Query: 566 DLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNV 606
++ + G +E + E+ + K D W +++ ++G
Sbjct: 408 EMYAKCGFIEKSLEIFNGLKEK-DTASWTSIICGLAMNGKT 447
>gi|255576950|ref|XP_002529360.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531180|gb|EEF33027.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 683
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 216/656 (32%), Positives = 348/656 (53%), Gaps = 65/656 (9%)
Query: 12 SQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKC 71
S+ + N L+ S + Y + +++ +QIH+ IF+ GL + SL L A C
Sbjct: 23 SKFSTFTNPTTGLSQQSCISYLKSCKSMTHLKQIHAQIFRVGLHQDIV---SLNKLMAFC 79
Query: 72 GLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFA 131
DP N LN A ++F C + Y +I FA
Sbjct: 80 ---------------TDPF-----------NGNLNYAEKMFKYIRYPCLLIYNLIIKAFA 113
Query: 132 QNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVI 191
+ ++ L +F +R G+ P+ T V + +LG + + L GLV K ++
Sbjct: 114 KKGNYKRTLVLFSKLREDGLWPDNFTYPFVFKAIGYLGEVSKAEKLRGLVTKTGLEFDTY 173
Query: 192 ISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKD 251
+ +L++MY + + LFDEM +R+++SWNVM++G+ K E A +F R+ +
Sbjct: 174 VRNSLIDMYAQLALTDVMKMLFDEMPDRDVISWNVMISGYVKCRRFEDAINVFCRMQEE- 232
Query: 252 VVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHS 311
G+ P++ +V +SAC G +IH
Sbjct: 233 -----------------------------SGLMPDEATVVSTLSACTALKRLELGKKIHH 263
Query: 312 IIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIED 371
V+ I ++ Y CG +++AR FE ++ W +++G+ G +E+
Sbjct: 264 -YVRDNVKFTPIIGNALLDMYCKCGCLSIARAVFEEMPSKNVICWTTMVSGYANCGELEE 322
Query: 372 ARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIAS 431
AR+LF RDV W+AMI+GY Q + + A+ LF M VKP++ +VS+ A
Sbjct: 323 ARELFEGSPIRDVVIWTAMINGYVQFNRFDEAVALFREMQIRKVKPDKFIVVSLLTGCAQ 382
Query: 432 SGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWN 491
+G +++G+W HE++ N I ++ + A+I+MYAKCG I A E+FY +R + T + W
Sbjct: 383 TGAIEQGKWIHEFIDENRIPIDAVVGTALIEMYAKCGFIEKALEIFYGLRVKDT--ASWT 440
Query: 492 AIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSV 551
+IICGLAM+G + L+++S +++ ++ + ITFIGVLS C H GLV+ G ++F SM+
Sbjct: 441 SIICGLAMNGKTSKALELFSKMKQAGVRPDDITFIGVLSACSHGGLVEEGRKFFNSMRME 500
Query: 552 YNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKAD---VVIWGTLLAASRIHGNVEV 608
Y ++P ++HYGC+VDLLGRAG L +AEE+I+ +P + V ++G+LL+A RI+GNVE+
Sbjct: 501 YQIKPKVEHYGCLVDLLGRAGLLNEAEELIKKIPDENKAITVPLYGSLLSACRIYGNVEM 560
Query: 609 GERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
GER AK L + S LL+NIYA A RWED +R++M+D G+K+ PG S +
Sbjct: 561 GERVAKQLVKFESSDSSVHTLLANIYAFADRWEDVTKVRRKMKDLGVKKTPGCSSI 616
>gi|225441187|ref|XP_002266244.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 722
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 217/630 (34%), Positives = 338/630 (53%), Gaps = 64/630 (10%)
Query: 38 AVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMIS 97
+ QG QIH+ +GL F + LI+ ++ G
Sbjct: 21 SFKQGLQIHAQTIVNGLHHQIFSISRLISFFSLLG------------------------- 55
Query: 98 GYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIP-NEV 156
D L+ +R +F + + +MI G++++D REA+ ++ M G+ P N
Sbjct: 56 ---SKDGLDHSRLLFSQIDCPNLFMWNTMIRGYSRSDNPREAIVLYMSMIAKGIAPPNNF 112
Query: 157 TLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEM 216
T +++S L + +H +IK + + + L+++Y V +L
Sbjct: 113 TFPFLLNSCARLSSLEPGHEVHSHIIKHGFESDLFVRNALIHLYSVFGNL---------- 162
Query: 217 KERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYR 276
LAR LF+ +D+VS+ TMI GY +V + AL ++
Sbjct: 163 ---------------------NLARTLFDESLVRDLVSYNTMIKGYAEVNQPESALCLFG 201
Query: 277 AMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVK--AGFDCYDFIQATIIHFYAA 334
M GI P++ V L S C G QIH+ + K D +++ I+ YA
Sbjct: 202 EMQNSGILPDEFTFVALFSVCSVLNEPNVGKQIHAQVYKNLRSIDSNILLKSAIVDMYAK 261
Query: 335 CGRINLARLQFE-LGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISG 393
CG IN+A F +G A+W++++ G+ R G I AR+LFN+M +RDV SW+AMISG
Sbjct: 262 CGLINIAERVFSTMGTSKSAAAWSSMVCGYARCGEINVARKLFNHMHERDVISWTAMISG 321
Query: 394 YAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG-RWAHEYVLNNSITL 452
Y+Q Q + ALELF M G+KP+E+T+V+V A A G G R H+Y+ N
Sbjct: 322 YSQAGQCSEALELFKEMEALGIKPDEVTLVAVLSACARLGAFDLGKRLYHQYIENGVFNQ 381
Query: 453 NDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSD 512
N L+AA++DMYAKCGSI++A E+F + + +N++I GLA HG + ++ +
Sbjct: 382 NTILTAAVMDMYAKCGSIDSALEIFRRVGKNMKTGFVFNSMIAGLAQHGLGETAITVFRE 441
Query: 513 LEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAG 572
L +K + +TF+GVL C H+GL++ G++ F+SM + Y ++P ++HYGCMVDLLGR G
Sbjct: 442 LISTGLKPDEVTFVGVLCACGHSGLIEEGKKLFESMFNAYGIKPQMEHYGCMVDLLGRYG 501
Query: 573 QLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSN 632
LE+A ++++ MP +A+ VIW LL+A R HGNV++GE A + L ++ HG VLLSN
Sbjct: 502 CLEEAYDLVQKMPFEANSVIWRALLSACRTHGNVKIGEIAGQKLLEMEAQHGARYVLLSN 561
Query: 633 IYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
I ADA +WE+A +RK M D G+++ PG+S
Sbjct: 562 ILADANQWEEARQVRKVMEDHGIRKPPGWS 591
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 131/481 (27%), Positives = 232/481 (48%), Gaps = 66/481 (13%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
L C+ ++ G ++HS I K G ES+ F++N+LI+LY+ G ++ A+++FD D
Sbjct: 118 LNSCARLSSLEPGHEVHSHIIKHGFESDLFVRNALIHLYSVFGNLNLARTLFDESLVRDL 177
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
V+ N MI GY A+ + AL +F +M+
Sbjct: 178 VSYNTMIKGY-------------------------------AEVNQPESALCLFGEMQNS 206
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLM--IDGFVIISTNLLNMYCVCSSLV 207
G++P+E T ++ S L + +H V K + ID +++ + +++MY C +
Sbjct: 207 GILPDEFTFVALFSVCSVLNEPNVGKQIHAQVYKNLRSIDSNILLKSAIVDMYAKCGLIN 266
Query: 208 EARSLFDEM-KERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVE 266
A +F M ++ +W+ M+ G+A+ G + +AR+LF + +DV+SW MI GY Q
Sbjct: 267 IAERVFSTMGTSKSAAAWSSMVCGYARCGEINVARKLFNHMHERDVISWTAMISGYSQAG 326
Query: 267 RLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQI-HSIIVKAGFDCYDFIQ 325
+ SEAL +++ M GI P++V +V ++SAC R AF G ++ H I F+ +
Sbjct: 327 QCSEALELFKEMEALGIKPDEVTLVAVLSACARLGAFDLGKRLYHQYIENGVFNQNTILT 386
Query: 326 ATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVY 385
A ++ YA CG I+ A +E R++ NM+ V+
Sbjct: 387 AAVMDMYAKCGSIDSA---------------------------LEIFRRVGKNMKTGFVF 419
Query: 386 SWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYV 445
++MI+G AQ+ A+ +F ++ G+KP+E+T V V CA SG ++EG+ E +
Sbjct: 420 --NSMIAGLAQHGLGETAITVFRELISTGLKPDEVTFVGVLCACGHSGLIEEGKKLFESM 477
Query: 446 LNN-SITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDAN 504
N I ++D+ + G + A+++ + SV W A++ HG+
Sbjct: 478 FNAYGIKPQMEHYGCMVDLLGRYGCLEEAYDLVQKMPFEANSVI-WRALLSACRTHGNVK 536
Query: 505 L 505
+
Sbjct: 537 I 537
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 98/389 (25%), Positives = 183/389 (47%), Gaps = 71/389 (18%)
Query: 15 ANLQNSDY---ELALVSALRYCSAHIAVSQGQQIHSLIFKS--GLESNTFIQNSLINLYA 69
+QNS E V+ CS + G+QIH+ ++K+ ++SN ++++++++YA
Sbjct: 201 GEMQNSGILPDEFTFVALFSVCSVLNEPNVGKQIHAQVYKNLRSIDSNILLKSAIVDMYA 260
Query: 70 KCGLISQAKSMFDSCSTLDPVAC-NIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIM 128
KCGLI+ A+ +F + T A + M+ GY R +N AR++F+ + +S+T+MI
Sbjct: 261 KCGLINIAERVFSTMGTSKSAAAWSSMVCGYARCGEINVARKLFNHMHERDVISWTAMIS 320
Query: 129 GFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGI-WECRMLHGLVIKLMID 187
G++Q EALE+F++M LG+ P+EVTL +V+S+ LG R+ H + + +
Sbjct: 321 GYSQAGQCSEALELFKEMEALGIKPDEVTLVAVLSACARLGAFDLGKRLYHQYIENGVFN 380
Query: 188 GFVIISTNLLNMYCVCSSLVEARSLFDEMKE--RNIVSWNVMLNGFAKAGLVELARELFE 245
I++ +++MY C S+ A +F + + + +N M+ G A+ GL E
Sbjct: 381 QNTILTAAVMDMYAKCGSIDSALEIFRRVGKNMKTGFVFNSMIAGLAQHGLGE------- 433
Query: 246 RIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGE 305
A+T++R ++ G+ P++V V ++ ACG + E
Sbjct: 434 ------------------------TAITVFRELISTGLKPDEVTFVGVLCACGHSGLIEE 469
Query: 306 GLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIR 365
G + + ++ F+ Y GIK + + ++ R
Sbjct: 470 GKK----LFESMFNAY--------------------------GIKPQMEHYGCMVDLLGR 499
Query: 366 NGMIEDARQLFNNMQ-KRDVYSWSAMISG 393
G +E+A L M + + W A++S
Sbjct: 500 YGCLEEAYDLVQKMPFEANSVIWRALLSA 528
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/368 (21%), Positives = 164/368 (44%), Gaps = 42/368 (11%)
Query: 293 LISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDH 352
L+ +C +F +GLQIH+ + G F + +I F++ LG KD
Sbjct: 15 LLESCK---SFKQGLQIHAQTIVNGLHHQIFSISRLISFFSL------------LGSKDG 59
Query: 353 IASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVD 412
++ +R LF+ + +++ W+ MI GY++++ P A+ L+ M+
Sbjct: 60 ----------------LDHSRLLFSQIDCPNLFMWNTMIRGYSRSDNPREAIVLYMSMIA 103
Query: 413 AGV-KPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSIN 471
G+ PN T + + A +L+ G H +++ + + + A+I +Y+ G++N
Sbjct: 104 KGIAPPNNFTFPFLLNSCARLSSLEPGHEVHSHIIKHGFESDLFVRNALIHLYSVFGNLN 163
Query: 472 TAFEVFYH--IRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVL 529
A +F +RD + +N +I G A L ++ +++ I + TF+ +
Sbjct: 164 LARTLFDESLVRDLVS----YNTMIKGYAEVNQPESALCLFGEMQNSGILPDEFTFVALF 219
Query: 530 STCCHAGLVDLGER-YFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKA 588
S C ++G++ + + K++ +++ ++ +VD+ + G + AE V +M
Sbjct: 220 SVCSVLNEPNVGKQIHAQVYKNLRSIDSNILLKSAIVDMYAKCGLINIAERVFSTMGTSK 279
Query: 589 DVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRK 648
W +++ G + V A K + S + + Y+ AG+ +A + K
Sbjct: 280 SAAAWSSMVCGYARCGEINV---ARKLFNHMHERDVISWTAMISGYSQAGQCSEALELFK 336
Query: 649 EMRDCGMK 656
EM G+K
Sbjct: 337 EMEALGIK 344
>gi|297851096|ref|XP_002893429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297339271|gb|EFH69688.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 790
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 224/648 (34%), Positives = 351/648 (54%), Gaps = 27/648 (4%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
L L LR S +A + +H I G + + I N LI++Y K + A+ +FD
Sbjct: 19 LRLCLPLRRTSLQLA----RAVHGNIITFGFQPHAHILNRLIDVYCKSSELDYARQLFDE 74
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPI--KCCVSYTSMIMGFAQNDCWREALE 141
S D +A M+SGY + + AR VF++TP+ + V Y +MI GF+ N+ A+
Sbjct: 75 ISEPDKIARTTMVSGYCASGDIALARSVFEETPVSMRDTVMYNAMITGFSHNNDGYSAIN 134
Query: 142 VFRDMRILGVIPNEVTLASVISS-SVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMY 200
+F M+ G P++ T ASV++ ++ + +C H +K +S L+++Y
Sbjct: 135 LFCKMKHEGFKPDDFTYASVLAGLALVVDDEKQCVQFHAAALKSGAGYVTSVSNALVSVY 194
Query: 201 CVCSS----LVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSK-DVVSW 255
C+S L AR +FD++ E++ SW M+ G+ K G +L +EL + + +V++
Sbjct: 195 SRCASSPSLLHSARKVFDDIPEKDERSWTTMMTGYVKNGCFDLGKELLKGMDENMKLVAY 254
Query: 256 GTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVK 315
MI GY+ EAL M R M+ GI ++ +I AC A G Q+H+ +++
Sbjct: 255 NAMISGYVNCGLYQEALEMVRRMVSSGIELDEFTYPSVIRACANARLLQLGKQVHAYVLR 314
Query: 316 AGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQL 375
+ F +++ Y CG+ N AR FE + SWNAL++G++ +G I +A+ +
Sbjct: 315 REDFSFHF-DNSLVTLYYKCGKFNEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLI 373
Query: 376 FNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTL 435
F M+++++ SW MISG A+N L+LF M G +P + + A G
Sbjct: 374 FKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAY 433
Query: 436 KEGRWAHEYVLNNSITLNDNLSA--AIIDMYAKCGSINTAFEVFYHIRDRTT----SVSP 489
G+ H ++ I + +LSA A+I MYAKCG + A +VF RT SVS
Sbjct: 434 CNGQQFHAQLVK--IGFDSSLSAGNALITMYAKCGVVEEAQQVF-----RTMPCLDSVS- 485
Query: 490 WNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMK 549
WNA+I L HG + +Y ++ K+ I+ + ITF+ VL+ C HAGLVD G +YF SM+
Sbjct: 486 WNALIAALGQHGHGVEAVDVYEEMLKKGIRPDRITFLTVLTACSHAGLVDQGRKYFNSME 545
Query: 550 SVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVG 609
+VY + P HY ++DLL R+G+ +AE +I S+P K IW LL+ R+HGN+E+G
Sbjct: 546 TVYRIPPGADHYARLIDLLCRSGKFSEAESIIESLPFKPTAEIWEALLSGCRVHGNMELG 605
Query: 610 ERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKR 657
AA L GL P H + +LLSN+YA G+WE+ +RK MRD G+K+
Sbjct: 606 IIAADKLFGLIPEHDGTYMLLSNMYAATGQWEEVARVRKLMRDRGVKK 653
>gi|449497589|ref|XP_004160443.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 226/657 (34%), Positives = 346/657 (52%), Gaps = 56/657 (8%)
Query: 12 SQKANLQNSDYELA---LVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLY 68
+QK +NSD + +V R SA++ Q + S +F +T N++I+ Y
Sbjct: 43 TQKLESKNSDSTIVDSDIVKWNRKISAYMRKGQCESALS-VFNGMRRRSTVTYNAMISGY 101
Query: 69 AKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIM 128
A+ +F+ D ++ N+M+SGY++N L+ AR +F++ P K VS+ +M+
Sbjct: 102 LSNNKFDCARKVFEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLS 161
Query: 129 GFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDG 188
GFAQN EA ++F M ++ NE++ ++S+ V G I + R L +
Sbjct: 162 GFAQNGFVEEARKIFDQM----LVKNEISWNGLLSAYVQNGRIEDARRLFDSKMD----- 212
Query: 189 FVIISTN-LLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERI 247
+ I+S N L+ Y L +ARSLFD M R+ +SWN+M+ G+A+ GL+ AR LFE +
Sbjct: 213 WEIVSWNCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEEL 272
Query: 248 PSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGL 307
P +DV +W M+ G++Q L EA ++ M N+V +I+
Sbjct: 273 PIRDVFAWTAMVSGFVQNGMLDEATRIFEEM----PEKNEVSWNAMIAG----------- 317
Query: 308 QIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNG 367
Y +I AR F+ + +SWN ++ G+ + G
Sbjct: 318 ------------------------YVQSQQIEKARELFDQMPSRNTSSWNTMVTGYAQCG 353
Query: 368 MIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFC 427
I+ A+ LF+ M +RD SW+AMISGYAQ+ Q AL LF M G N +
Sbjct: 354 NIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALS 413
Query: 428 AIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSV 487
+ A L+ G+ H ++ A++ MY KCGSI AF+VF I ++ +
Sbjct: 414 SCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEK--DI 471
Query: 488 SPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKS 547
WN +I G A HG L ++ + K IK + +T +GVLS C H GLVD G YF S
Sbjct: 472 VSWNTMIAGYARHGFGKEALALFESM-KMTIKPDDVTLVGVLSACSHTGLVDKGMEYFNS 530
Query: 548 MKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVE 607
M Y + + KHY CM+DLLGRAG+L++A +++SMP D WG LL ASRIHG+ E
Sbjct: 531 MYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGDTE 590
Query: 608 VGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
+GE+AA+ + ++P + VLLSN+YA +GRW + +R +MRD G+K++PG+S V
Sbjct: 591 LGEKAAEKVFEMEPDNSGMYVLLSNLYAASGRWREVREMRSKMRDKGVKKVPGYSWV 647
>gi|347954546|gb|AEP33773.1| organelle transcript processing 82, partial [Lobularia maritima]
Length = 695
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 213/566 (37%), Positives = 318/566 (56%), Gaps = 39/566 (6%)
Query: 103 DRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVI 162
D L A VF+ + + +M G A + AL ++ M LG++PN T ++
Sbjct: 36 DGLPYAISVFETIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLL 95
Query: 163 SSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIV 222
S E + +HG V+KL D + + T+L++MY L +AR +FD+ R++V
Sbjct: 96 KSCAKSKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVV 155
Query: 223 SWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDG 282
S+ ++ G+A G + A+++F+ IP KDVVSW MI GY + EAL +++ M+
Sbjct: 156 SYTALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTN 215
Query: 283 IAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLAR 342
+ P++ +V ++SAC ++ + G Q+HS I GF I +I Y CG + A
Sbjct: 216 VRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETAC 275
Query: 343 LQFE-LGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPN 401
FE L KD + SWN LI G+ + ++
Sbjct: 276 GLFEGLSYKD-VISWNTLIGGYTHMNLYKE------------------------------ 304
Query: 402 MALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSA--- 458
AL LF M+ +G PN++TM+S+ A A G ++ GRW H Y+ N + N S+
Sbjct: 305 -ALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYI-NKRLKGVANASSHRT 362
Query: 459 AIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNI 518
++IDMYAKCG I A +VF I +R S+S WNA+I G AMHG AN I+S + K I
Sbjct: 363 SLIDMYAKCGDIEAAQQVFDSILNR--SLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEI 420
Query: 519 KLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAE 578
+ + ITF+G+LS C H+G++DLG F+SMK Y + P L+HYGCM+DLLG +G ++AE
Sbjct: 421 EPDDITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAE 480
Query: 579 EVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAG 638
E+I +M M+ D VIW +LL A ++HGNVE+GE A++L ++P + S VLLSNIYA AG
Sbjct: 481 EMINTMEMEPDGVIWCSLLKACKMHGNVELGESYAQNLIKIEPKNPGSYVLLSNIYATAG 540
Query: 639 RWEDAFSIRKEMRDCGMKRLPGFSGV 664
RW + IR + D GMK++PG S +
Sbjct: 541 RWNEVAKIRALLNDKGMKKVPGCSSI 566
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 130/483 (26%), Positives = 214/483 (44%), Gaps = 74/483 (15%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
L+ C+ A +GQQIH + K G + + ++ SLI++Y + G + A+ +FD S D
Sbjct: 95 LKSCAKSKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDV 154
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
V+ +I+GY + A+++FD+ PIK VS+ +MI G+A+ +EALE+F++M
Sbjct: 155 VSYTALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKT 214
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
V P+E T+ SV+S+ I R +H + + I L+++Y C + A
Sbjct: 215 NVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETA 274
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLS 269
LF+ + ++++SWN + I GY +
Sbjct: 275 CGLFEGLSYKDVISWNTL-------------------------------IGGYTHMNLYK 303
Query: 270 EALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVK--AGFDCYDFIQAT 327
EAL +++ ML G +PNDV ++ ++ AC A G IH I K G + +
Sbjct: 304 EALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTS 363
Query: 328 IIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSW 387
+I YA CG I A+ F+ + ++SWNA+I GF +G A +F+ M+K +
Sbjct: 364 LIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNE---- 419
Query: 388 SAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLN 447
++P++IT V + A + SG L GR +
Sbjct: 420 ---------------------------IEPDDITFVGLLSACSHSGMLDLGRHIFRSMKE 452
Query: 448 N-SITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGL----AMHGD 502
+ IT +ID+ G A E+ T + P I C L MHG+
Sbjct: 453 DYKITPKLEHYGCMIDLLGHSGLFKEAEEMI-----NTMEMEPDGVIWCSLLKACKMHGN 507
Query: 503 ANL 505
L
Sbjct: 508 VEL 510
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 128/290 (44%), Gaps = 66/290 (22%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E +VS + C+ ++ G+Q+HS I G SN I N+LI+LY KCG + A +F+
Sbjct: 220 ESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFE 279
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
S D ++ N +I G YT M + ++EAL +
Sbjct: 280 GLSYKDVISWNTLIGG------------------------YTHM-------NLYKEALLL 308
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIIS---TNLLNM 199
F++M G PN+VT+ S++ + HLG I R +H + I + G S T+L++M
Sbjct: 309 FQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIH-VYINKRLKGVANASSHRTSLIDM 367
Query: 200 YCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMI 259
Y C + A+ +FD + R++ SWN M+ GFA G A ++F R+ +
Sbjct: 368 YAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNE-------- 419
Query: 260 DGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQI 309
I P+D+ V L+SAC + G I
Sbjct: 420 -----------------------IEPDDITFVGLLSACSHSGMLDLGRHI 446
>gi|225432698|ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14820
[Vitis vinifera]
gi|297737070|emb|CBI26271.3| unnamed protein product [Vitis vinifera]
Length = 727
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 204/570 (35%), Positives = 312/570 (54%), Gaps = 33/570 (5%)
Query: 93 NIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVI 152
++IS + L+ A VF+ P + ++++ + L V+ MR G+
Sbjct: 60 KLVISSCALSSSLDYALSVFNLIPKPETHLCNRFLRELSRSEEPEKTLLVYERMRTQGLA 119
Query: 153 PNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSL 212
+ + ++ + + + E +HGL KL D + T L+ MY C + EAR +
Sbjct: 120 VDRFSFPPLLKALSRVKSLVEGLEIHGLAAKLGFDSDPFVQTGLVRMYAACGRIAEARLM 179
Query: 213 FDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEAL 272
FD ++F R DVV+W MIDGY Q ++AL
Sbjct: 180 FD---------------------------KMFHR----DVVTWSIMIDGYCQSGLFNDAL 208
Query: 273 TMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFY 332
++ M + P+++M+ ++SACGRA G IH I++ +Q+ ++ Y
Sbjct: 209 LLFEEMKNYNVEPDEMMLSTVLSACGRAGNLSYGKMIHDFIMENNIVVDPHLQSALVTMY 268
Query: 333 AACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMIS 392
A+CG ++LA FE ++ + A++ G+ + G IE+AR +FN M K+D+ WSAMIS
Sbjct: 269 ASCGSMDLALNLFEKMTPKNLVASTAMVTGYSKLGQIENARSVFNQMVKKDLVCWSAMIS 328
Query: 393 GYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITL 452
GYA+++ P AL LF+ M G+KP+++TM+SV A A G L + +W H +V N
Sbjct: 329 GYAESDSPQEALNLFNEMQSLGIKPDQVTMLSVITACAHLGALDQAKWIHLFVDKNGFGG 388
Query: 453 NDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSD 512
++ A+I+MYAKCGS+ A +F + + +V W +I AMHGDA L+ +
Sbjct: 389 ALPINNALIEMYAKCGSLERARRIFDKMPRK--NVISWTCMISAFAMHGDAGSALRFFHQ 446
Query: 513 LEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAG 572
+E NI+ N ITF+GVL C HAGLV+ G + F SM + +N+ P HYGCMVDL GRA
Sbjct: 447 MEDENIEPNGITFVGVLYACSHAGLVEEGRKIFYSMINEHNITPKHVHYGCMVDLFGRAN 506
Query: 573 QLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSN 632
L +A E++ +MP+ +V+IWG+L+AA R+HG +E+GE AAK L L P H + V LSN
Sbjct: 507 LLREALELVEAMPLAPNVIIWGSLMAACRVHGEIELGEFAAKRLLELDPDHDGAHVFLSN 566
Query: 633 IYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
IYA A RWED +RK M+ G+ + G S
Sbjct: 567 IYAKARRWEDVGQVRKLMKHKGISKERGCS 596
Score = 196 bits (498), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 130/466 (27%), Positives = 220/466 (47%), Gaps = 64/466 (13%)
Query: 41 QGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYI 100
+G +IH L K G +S+ F+Q L+ +YA CG I++A+ MFD D V +IMI GY
Sbjct: 140 EGLEIHGLAAKLGFDSDPFVQTGLVRMYAACGRIAEARLMFDKMFHRDVVTWSIMIDGYC 199
Query: 101 RNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLAS 160
++ ND AL +F +M+ V P+E+ L++
Sbjct: 200 QSGLFND-------------------------------ALLLFEEMKNYNVEPDEMMLST 228
Query: 161 VISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERN 220
V+S+ G + +M+H +++ I + + L+ MY C S+ A +LF++M +N
Sbjct: 229 VLSACGRAGNLSYGKMIHDFIMENNIVVDPHLQSALVTMYASCGSMDLALNLFEKMTPKN 288
Query: 221 IVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLC 280
+V+ M+ G++K G +E AR +F ++ KD+V W MI GY + + EAL ++ M
Sbjct: 289 LVASTAMVTGYSKLGQIENARSVFNQMVKKDLVCWSAMISGYAESDSPQEALNLFNEMQS 348
Query: 281 DGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINL 340
GI P+ V ++ +I+AC A + IH + K GF I +I YA CG +
Sbjct: 349 LGIKPDQVTMLSVITACAHLGALDQAKWIHLFVDKNGFGGALPINNALIEMYAKCGSLER 408
Query: 341 ARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQP 400
AR F+ + ++ SW +I+ F +G DA
Sbjct: 409 ARRIFDKMPRKNVISWTCMISAFAMHG---DA---------------------------- 437
Query: 401 NMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLN-NSITLNDNLSAA 459
AL FH M D ++PN IT V V A + +G ++EGR ++N ++IT
Sbjct: 438 GSALRFFHQMEDENIEPNGITFVGVLYACSHAGLVEEGRKIFYSMINEHNITPKHVHYGC 497
Query: 460 IIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANL 505
++D++ + + A E+ + +V W +++ +HG+ L
Sbjct: 498 MVDLFGRANLLREALELVEAM-PLAPNVIIWGSLMAACRVHGEIEL 542
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 105/428 (24%), Positives = 188/428 (43%), Gaps = 62/428 (14%)
Query: 207 VEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVE 266
V A+ L ++ + ++++ A + ++ A +F IP + + + E
Sbjct: 42 VHAQILRSKLDRSTSLLVKLVISSCALSSSLDYALSVFNLIPKPETHLCNRFLRELSRSE 101
Query: 267 RLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQA 326
+ L +Y M G+A + L+ A R + EGL+IH + K GFD F+Q
Sbjct: 102 EPEKTLLVYERMRTQGLAVDRFSFPPLLKALSRVKSLVEGLEIHGLAAKLGFDSDPFVQT 161
Query: 327 TIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYS 386
++ YAACGRI ARL +F+ M RDV +
Sbjct: 162 GLVRMYAACGRIAEARL-------------------------------MFDKMFHRDVVT 190
Query: 387 WSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVL 446
WS MI GY Q+ N AL LF M + V+P+E+ + +V A +G L G+ H++++
Sbjct: 191 WSIMIDGYCQSGLFNDALLLFEEMKNYNVEPDEMMLSTVLSACGRAGNLSYGKMIHDFIM 250
Query: 447 NNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSP----------------- 489
N+I ++ +L +A++ MYA CGS++ A +F + + S
Sbjct: 251 ENNIVVDPHLQSALVTMYASCGSMDLALNLFEKMTPKNLVASTAMVTGYSKLGQIENARS 310
Query: 490 ------------WNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGL 537
W+A+I G A L ++++++ IK + +T + V++ C H G
Sbjct: 311 VFNQMVKKDLVCWSAMISGYAESDSPQEALNLFNEMQSLGIKPDQVTMLSVITACAHLGA 370
Query: 538 VDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLL 597
+D ++ L ++++ + G LE A + MP K +V+ W ++
Sbjct: 371 LDQA-KWIHLFVDKNGFGGALPINNALIEMYAKCGSLERARRIFDKMPRK-NVISWTCMI 428
Query: 598 AASRIHGN 605
+A +HG+
Sbjct: 429 SAFAMHGD 436
Score = 155 bits (392), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 95/315 (30%), Positives = 165/315 (52%), Gaps = 43/315 (13%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E+ L + L C +S G+ IH I ++ + + +Q++L+ +YA CG + A ++F+
Sbjct: 223 EMMLSTVLSACGRAGNLSYGKMIHDFIMENNIVVDPHLQSALVTMYASCGSMDLALNLFE 282
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+ + VA M++GY + ++ +AR VF++ K V +++MI G+A++D +EAL +
Sbjct: 283 KMTPKNLVASTAMVTGYSKLGQIENARSVFNQMVKKDLVCWSAMISGYAESDSPQEALNL 342
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
F +M+ LG+ P++VT+ SVI++ HLG + + + +H V K G + I+ L+ MY
Sbjct: 343 FNEMQSLGIKPDQVTMLSVITACAHLGALDQAKWIHLFVDKNGFGGALPINNALIEMYAK 402
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFA------------------------------ 232
C SL AR +FD+M +N++SW M++ FA
Sbjct: 403 CGSLERARRIFDKMPRKNVISWTCMISAFAMHGDAGSALRFFHQMEDENIEPNGITFVGV 462
Query: 233 -----KAGLVELARELF-----ERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDG 282
AGLVE R++F E + V +G M+D + + L EAL + AM
Sbjct: 463 LYACSHAGLVEEGRKIFYSMINEHNITPKHVHYGCMVDLFGRANLLREALELVEAM---P 519
Query: 283 IAPNDVMIVDLISAC 297
+APN ++ L++AC
Sbjct: 520 LAPNVIIWGSLMAAC 534
>gi|15222566|ref|NP_173907.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75172213|sp|Q9FRI5.1|PPR57_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g25360
gi|11067273|gb|AAG28801.1|AC079374_4 hypothetical protein [Arabidopsis thaliana]
gi|332192491|gb|AEE30612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 790
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 230/668 (34%), Positives = 353/668 (52%), Gaps = 34/668 (5%)
Query: 4 DHFHSVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNS 63
D ++ N ANL+ L LR S +A + +H I G + I N
Sbjct: 6 DLVRAIANRYAANLR-------LCLPLRRTSLQLA----RAVHGNIITFGFQPRAHILNR 54
Query: 64 LINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPI--KCCV 121
LI++Y K ++ A+ +FD S D +A M+SGY + + AR VF+K P+ + V
Sbjct: 55 LIDVYCKSSELNYARQLFDEISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTV 114
Query: 122 SYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISS-SVHLGGIWECRMLHGL 180
Y +MI GF+ N+ A+ +F M+ G P+ T ASV++ ++ +C H
Sbjct: 115 MYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAA 174
Query: 181 VIKLMIDGFVIISTNLLNMYCVCSS----LVEARSLFDEMKERNIVSWNVMLNGFAKAGL 236
+K +S L+++Y C+S L AR +FDE+ E++ SW M+ G+ K G
Sbjct: 175 ALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGY 234
Query: 237 VELARELFERIPSK-DVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLIS 295
+L EL E + +V++ MI GY+ EAL M R M+ GI ++ +I
Sbjct: 235 FDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIR 294
Query: 296 ACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIAS 355
AC A G Q+H+ +++ + F +++ Y CG+ + AR FE + S
Sbjct: 295 ACATAGLLQLGKQVHAYVLRREDFSFHF-DNSLVSLYYKCGKFDEARAIFEKMPAKDLVS 353
Query: 356 WNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGV 415
WNAL++G++ +G I +A+ +F M+++++ SW MISG A+N L+LF M G
Sbjct: 354 WNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGF 413
Query: 416 KPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSA--AIIDMYAKCGSINTA 473
+P + + A G G+ H +L I + +LSA A+I MYAKCG + A
Sbjct: 414 EPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLK--IGFDSSLSAGNALITMYAKCGVVEEA 471
Query: 474 FEVFYHIRDRT----TSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVL 529
+VF RT SVS WNA+I L HG + +Y ++ K+ I+ + IT + VL
Sbjct: 472 RQVF-----RTMPCLDSVS-WNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVL 525
Query: 530 STCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKAD 589
+ C HAGLVD G +YF SM++VY + P HY ++DLL R+G+ DAE VI S+P K
Sbjct: 526 TACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPT 585
Query: 590 VVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKE 649
IW LL+ R+HGN+E+G AA L GL P H + +LLSN++A G+WE+ +RK
Sbjct: 586 AEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKL 645
Query: 650 MRDCGMKR 657
MRD G+K+
Sbjct: 646 MRDRGVKK 653
>gi|449439555|ref|XP_004137551.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 225/657 (34%), Positives = 345/657 (52%), Gaps = 56/657 (8%)
Query: 12 SQKANLQNSDYELA---LVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLY 68
+QK +NSD + +V R SA++ Q + S +F +T N++I+ Y
Sbjct: 43 TQKLESKNSDSTIVDSDIVKWNRKISAYMRKGQCESALS-VFNGMRRRSTVTYNAMISGY 101
Query: 69 AKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIM 128
A+ +F+ D ++ N+M+SGY++N L+ AR +F++ P K VS+ +M+
Sbjct: 102 LSNNKFDCARKVFEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLS 161
Query: 129 GFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDG 188
GFAQN EA ++F M ++ NE++ ++S+ V G I + R L +
Sbjct: 162 GFAQNGFVEEARKIFDQM----LVKNEISWNGLLSAYVQNGRIEDARRLFDSKMD----- 212
Query: 189 FVIISTN-LLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERI 247
+ I+S N L+ Y L +ARSLFD M R+ +SWN+M+ G+A+ GL+ AR LFE +
Sbjct: 213 WEIVSWNCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARRLFEEL 272
Query: 248 PSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGL 307
P +DV +W M+ G++Q L EA ++ M N+V +I+
Sbjct: 273 PIRDVFAWTAMVSGFVQNGMLDEATRIFEEM----PEKNEVSWNAMIAG----------- 317
Query: 308 QIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNG 367
Y +I AR F+ + +SWN ++ G+ + G
Sbjct: 318 ------------------------YVQSQQIEKARELFDQMPSRNTSSWNTMVTGYAQCG 353
Query: 368 MIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFC 427
I+ A+ LF+ M +RD SW+AMISGYAQ+ Q AL LF M G N +
Sbjct: 354 NIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALS 413
Query: 428 AIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSV 487
+ A L+ G+ H ++ A++ MY KCGSI AF+VF I ++ +
Sbjct: 414 SCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEK--DI 471
Query: 488 SPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKS 547
WN +I G A HG L ++ + K IK + +T +GVLS C H G VD G YF S
Sbjct: 472 VSWNTMIAGYARHGFGKEALALFESM-KMTIKPDDVTLVGVLSACSHTGFVDKGMEYFNS 530
Query: 548 MKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVE 607
M Y + + KHY CM+DLLGRAG+L++A +++SMP D WG LL ASRIHG+ E
Sbjct: 531 MYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGDTE 590
Query: 608 VGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
+GE+AA+ + ++P + VLLSN+YA +GRW + +R +MRD G+K++PG+S V
Sbjct: 591 LGEKAAEKVFEMEPDNSGMYVLLSNLYAASGRWREVREMRSKMRDKGVKKVPGYSWV 647
>gi|357436395|ref|XP_003588473.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477521|gb|AES58724.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 827
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 203/635 (31%), Positives = 361/635 (56%), Gaps = 19/635 (2%)
Query: 42 GQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIR 101
G+Q+H ++ K G +N ++ N+LI++Y KCG + +AK + + + D V+ N +I+ +
Sbjct: 153 GRQVHGMVLKHGFVTNVYVGNALIDMYGKCGSLDEAKKVLEGMTQKDCVSWNSIITACVA 212
Query: 102 NDRLNDAREVFDKTPIK----CCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVT 157
N + +A ++ + + V+++++I GF+ N E++E+F M GV P+ T
Sbjct: 213 NGVVYEALDLLENMLLSELEPNVVTWSAVIGGFSSNAYDVESVELFARMVGAGVAPDART 272
Query: 158 LASVISSSVHLGGIWECRMLHGLVIK--LMIDGFVIISTNLLNMYCVCSSLVEARSLFDE 215
LASV+ + + ++ + LHG +++ L +GFV + L+ MY C + A +F +
Sbjct: 273 LASVLPACSRMKWLFVGKELHGYIVRHELFSNGFV--ANALVGMYRRCGDMKSAFKIFSK 330
Query: 216 MKERNIVSWNVMLNGFAKAGLVELARELFERIPS----KDVVSWGTMIDGYLQVERLSEA 271
+ S+N M+ G+ + G V A+ELF ++ +D +SW MI G++ +A
Sbjct: 331 FARKCAASYNTMIVGYLENGNVGKAKELFYQMEQEGVERDRISWNCMISGHVDNFMFDDA 390
Query: 272 LTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHF 331
L ++R +L +GI P+ + +++ +G +IHSI + G F+ ++
Sbjct: 391 LMLFRDLLMEGIEPDSFTLGSILTGFADMTCIRQGKEIHSIAIVKGLQSNSFVGGALVEM 450
Query: 332 YAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ----KRDVYSW 387
Y C I A++ F+ + ++WNALI+G+ R I R+L M+ + +VY+W
Sbjct: 451 YCKCNDIIAAQMAFDEISERDTSTWNALISGYARCNQIGKIRELVERMKSDGFEPNVYTW 510
Query: 388 SAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLN 447
+++++G +N+Q ++A++LF+ M + ++P+ T+ + A + T+ G+ H Y +
Sbjct: 511 NSILAGLVENKQYDLAMQLFNEMQVSSLRPDIYTVGIILAACSKLATIHRGKQVHAYSIR 570
Query: 448 NSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTL 507
+ ++ A ++DMYAKCGSI ++V+ I + ++ NA++ AMHG +
Sbjct: 571 AGYDSDAHIGATLVDMYAKCGSIKHCYQVYNKISN--PNLVCHNAMLTAYAMHGHGEEGI 628
Query: 508 KIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDL 567
I+ + ++ + +TF+ VLS+C HAG + +G F M++ YN+ P LKHY CMVDL
Sbjct: 629 VIFRRMLDSRVRPDHVTFLSVLSSCVHAGSIKIGYECFYLMET-YNITPTLKHYTCMVDL 687
Query: 568 LGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSR 627
L RAG+L++A ++I++MPM+AD V W LL IH V +GE AA+ L L+PS+ +
Sbjct: 688 LSRAGKLDEAYQLIKNMPMEADSVTWSALLGGCFIHKEVALGEIAAEKLIELEPSNTGNY 747
Query: 628 VLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
VLL+N+YA AGRW D R+ M D GM++ PG S
Sbjct: 748 VLLANLYASAGRWHDLAKTRELMNDKGMQKSPGCS 782
Score = 198 bits (504), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 118/489 (24%), Positives = 240/489 (49%), Gaps = 40/489 (8%)
Query: 25 ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSC 84
L S L CS + G+++H I + L SN F+ N+L+ +Y +CG + A +F
Sbjct: 272 TLASVLPACSRMKWLFVGKELHGYIVRHELFSNGFVANALVGMYRRCGDMKSAFKIFSKF 331
Query: 85 STLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCC----VSYTSMIMGFAQNDCWREAL 140
+ + N MI GY+ N + A+E+F + + +S+ MI G N + +AL
Sbjct: 332 ARKCAASYNTMIVGYLENGNVGKAKELFYQMEQEGVERDRISWNCMISGHVDNFMFDDAL 391
Query: 141 EVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMY 200
+FRD+ + G+ P+ TL S+++ + I + + +H + I + + L+ MY
Sbjct: 392 MLFRDLLMEGIEPDSFTLGSILTGFADMTCIRQGKEIHSIAIVKGLQSNSFVGGALVEMY 451
Query: 201 CVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPS----KDVVSWG 256
C C+ ++ A+ FDE+ ER+ +WN +++G+A+ + REL ER+ S +V +W
Sbjct: 452 CKCNDIIAAQMAFDEISERDTSTWNALISGYARCNQIGKIRELVERMKSDGFEPNVYTWN 511
Query: 257 TMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKA 316
+++ G ++ ++ A+ ++ M + P+ + +++AC + G Q+H+ ++A
Sbjct: 512 SILAGLVENKQYDLAMQLFNEMQVSSLRPDIYTVGIILAACSKLATIHRGKQVHAYSIRA 571
Query: 317 GFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLF 376
G+D I AT++ YA CG I+ Q++
Sbjct: 572 GYDSDAHIGATLVDMYAKCGS-------------------------------IKHCYQVY 600
Query: 377 NNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLK 436
N + ++ +AM++ YA + + +F M+D+ V+P+ +T +SV + +G++K
Sbjct: 601 NKISNPNLVCHNAMLTAYAMHGHGEEGIVIFRRMLDSRVRPDHVTFLSVLSSCVHAGSIK 660
Query: 437 EGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICG 496
G + +IT ++D+ ++ G ++ A+++ ++ SV+ W+A++ G
Sbjct: 661 IGYECFYLMETYNITPTLKHYTCMVDLLSRAGKLDEAYQLIKNMPMEADSVT-WSALLGG 719
Query: 497 LAMHGDANL 505
+H + L
Sbjct: 720 CFIHKEVAL 728
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 140/616 (22%), Positives = 275/616 (44%), Gaps = 78/616 (12%)
Query: 38 AVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMIS 97
+++ G+Q+HS K+G ++ F+Q L+ +Y+
Sbjct: 46 SLTLGKQLHSHSIKTGFYNHNFVQTKLLQMYSI--------------------------- 78
Query: 98 GYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRI--LGVIPNE 155
N DA +FDK +K S+T+++ + + +F + LG +
Sbjct: 79 ----NSSFEDAWHMFDKMTLKNLHSWTAVLRLHLNMGLFYKGFMLFEEFLCDGLGEKLDF 134
Query: 156 VTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDE 215
V++ LG + R +HG+V+K V + L++MY C SL EA+ + +
Sbjct: 135 FVFPVVLNICCGLGDLELGRQVHGMVLKHGFVTNVYVGNALIDMYGKCGSLDEAKKVLEG 194
Query: 216 MKERNIVSWNVMLNGFAKAGLVELARELFERI----PSKDVVSWGTMIDGYLQVERLSEA 271
M +++ VSWN ++ G+V A +L E + +VV+W +I G+ E+
Sbjct: 195 MTQKDCVSWNSIITACVANGVVYEALDLLENMLLSELEPNVVTWSAVIGGFSSNAYDVES 254
Query: 272 LTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHF 331
+ ++ M+ G+AP+ + ++ AC R G ++H IV+ F+ ++
Sbjct: 255 VELFARMVGAGVAPDARTLASVLPACSRMKWLFVGKELHGYIVRHELFSNGFVANALVGM 314
Query: 332 YAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQK----RDVYSW 387
Y CG + A F + AS+N +I G++ NG + A++LF M++ RD SW
Sbjct: 315 YRRCGDMKSAFKIFSKFARKCAASYNTMIVGYLENGNVGKAKELFYQMEQEGVERDRISW 374
Query: 388 SAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLN 447
+ MISG+ N + AL LF ++ G++P+ T+ S+ A +++G+ H +
Sbjct: 375 NCMISGHVDNFMFDDALMLFRDLLMEGIEPDSFTLGSILTGFADMTCIRQGKEIHSIAIV 434
Query: 448 NSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTS--------------------- 486
+ N + A+++MY KC I A F I +R TS
Sbjct: 435 KGLQSNSFVGGALVEMYCKCNDIIAAQMAFDEISERDTSTWNALISGYARCNQIGKIREL 494
Query: 487 ------------VSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCH 534
V WN+I+ GL + +L ++++++++ +++ + T +L+ C
Sbjct: 495 VERMKSDGFEPNVYTWNSILAGLVENKQYDLAMQLFNEMQVSSLRPDIYTVGIILAACSK 554
Query: 535 AGLVDLGER-YFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIW 593
+ G++ + S+++ Y+ + + +VD+ + G ++ +V + ++V
Sbjct: 555 LATIHRGKQVHAYSIRAGYDSDAHIG--ATLVDMYAKCGSIKHCYQVYNKIS-NPNLVCH 611
Query: 594 GTLLAASRIHGNVEVG 609
+L A +HG+ E G
Sbjct: 612 NAMLTAYAMHGHGEEG 627
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 106/422 (25%), Positives = 189/422 (44%), Gaps = 48/422 (11%)
Query: 145 DMRILGVIPNEVTLASVI---SSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYC 201
+ +L P T S I S+S+ LG + LH IK + T LL MY
Sbjct: 23 NFSLLHTPPLTSTTYSTILQSSNSLTLG-----KQLHSHSIKTGFYNHNFVQTKLLQMYS 77
Query: 202 VCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDG 261
+ SS +A +FD+M +N+ SW +L GL LFE
Sbjct: 78 INSSFEDAWHMFDKMTLKNLHSWTAVLRLHLNMGLFYKGFMLFEEF-------------- 123
Query: 262 YLQVERLSEALTMYRAMLCDGIAPN-DVMIVDLI-SACGRAMAFGEGLQIHSIIVKAGFD 319
LCDG+ D + ++ + C G Q+H +++K GF
Sbjct: 124 -----------------LCDGLGEKLDFFVFPVVLNICCGLGDLELGRQVHGMVLKHGFV 166
Query: 320 CYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNM 379
++ +I Y CG ++ A+ E + SWN++I + NG++ +A L NM
Sbjct: 167 TNVYVGNALIDMYGKCGSLDEAKKVLEGMTQKDCVSWNSIITACVANGVVYEALDLLENM 226
Query: 380 ----QKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTL 435
+ +V +WSA+I G++ N ++ELF MV AGV P+ T+ SV A + L
Sbjct: 227 LLSELEPNVVTWSAVIGGFSSNAYDVESVELFARMVGAGVAPDARTLASVLPACSRMKWL 286
Query: 436 KEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIIC 495
G+ H Y++ + + N ++ A++ MY +CG + +AF++F + + +N +I
Sbjct: 287 FVGKELHGYIVRHELFSNGFVANALVGMYRRCGDMKSAFKIFSKFARKCA--ASYNTMIV 344
Query: 496 GLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVE 555
G +G+ +++ +E+ ++ + I++ ++S + D F+ + + +E
Sbjct: 345 GYLENGNVGKAKELFYQMEQEGVERDRISWNCMISGHVDNFMFDDALMLFRDLL-MEGIE 403
Query: 556 PD 557
PD
Sbjct: 404 PD 405
>gi|356513929|ref|XP_003525660.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 736
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 225/631 (35%), Positives = 324/631 (51%), Gaps = 74/631 (11%)
Query: 43 QQIHSLIFKSGLESNTFIQNSLINLYAKCGL-----ISQAKSMFDSCSTLDPVACNIMIS 97
+QIHSLI KSGL + F Q+ LI C L +S A S+F S P NI I
Sbjct: 42 KQIHSLIIKSGLHNTLFAQSKLIEF---CALSPSRDLSYALSLFHSIHHQPP---NIFI- 94
Query: 98 GYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVT 157
+ ++I + +L +F M G+ PN T
Sbjct: 95 -------------------------WNTLIRAHSLTPTPTSSLHLFSQMLHSGLYPNSHT 129
Query: 158 LASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMK 217
S+ S E + LH +KL + + T+L++MY L AR +FD+
Sbjct: 130 FPSLFKSCAKSKATHEAKQLHAHALKLALHLHPHVHTSLIHMYSQVGELRHARLVFDKST 189
Query: 218 ERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRA 277
R+ VS+ ++ G+ G V+ AR LF+ IP+KDVVSW MI GY+Q R EAL +
Sbjct: 190 LRDAVSFTALITGYVSEGHVDDARRLFDEIPAKDVVSWNAMIAGYVQSGRFEEALACFTR 249
Query: 278 MLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGR 337
M ++PN +V ++SACG + G I S + GF + ++ Y+ CG
Sbjct: 250 MQEADVSPNQSTMVSVLSACGHLRSLELGKWIGSWVRDRGFGKNLQLVNALVDMYSKCGE 309
Query: 338 INLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQN 397
I AR+LF+ M+ +DV W+ MI GY
Sbjct: 310 IG-------------------------------TARKLFDGMEDKDVILWNTMIGGYCHL 338
Query: 398 EQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYV---LNNSITLND 454
AL LF M+ V PN++T ++V A AS G L G+W H Y+ L + +N+
Sbjct: 339 SLYEEALVLFEVMLRENVTPNDVTFLAVLPACASLGALDLGKWVHAYIDKNLKGTGNVNN 398
Query: 455 -NLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDL 513
+L +II MYAKCG + A +VF + R S++ WNA+I GLAM+G A L ++ ++
Sbjct: 399 VSLWTSIIVMYAKCGCVEVAEQVFRSMGSR--SLASWNAMISGLAMNGHAERALGLFEEM 456
Query: 514 EKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQ 573
+ + ITF+GVLS C AG V+LG RYF SM Y + P L+HYGCM+DLL R+G+
Sbjct: 457 INEGFQPDDITFVGVLSACTQAGFVELGHRYFSSMNKDYGISPKLQHYGCMIDLLARSGK 516
Query: 574 LEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNI 633
++A+ ++ +M M+ D IWG+LL A RIHG VE GE A+ L L+P + + VLLSNI
Sbjct: 517 FDEAKVLMGNMEMEPDGAIWGSLLNACRIHGQVEFGEYVAERLFELEPENSGAYVLLSNI 576
Query: 634 YADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
YA AGRW+D IR ++ D GMK++PG + +
Sbjct: 577 YAGAGRWDDVAKIRTKLNDKGMKKVPGCTSI 607
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 130/486 (26%), Positives = 217/486 (44%), Gaps = 74/486 (15%)
Query: 28 SALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTL 87
S + C+ A + +Q+H+ K L + + SLI++Y++ G + A+ +FD +
Sbjct: 132 SLFKSCAKSKATHEAKQLHAHALKLALHLHPHVHTSLIHMYSQVGELRHARLVFDKSTLR 191
Query: 88 DPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMR 147
D V+ +I+GY+ ++DAR +FD+ P K VS+ +MI G+ Q+ + EAL F M+
Sbjct: 192 DAVSFTALITGYVSEGHVDDARRLFDEIPAKDVVSWNAMIAGYVQSGRFEEALACFTRMQ 251
Query: 148 ILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLV 207
V PN+ T+ SV+S+ C L L + I +V
Sbjct: 252 EADVSPNQSTMVSVLSA---------CGHLRSLELGKWIGSWVR---------------- 286
Query: 208 EARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVER 267
D +N+ N +++ ++K G + AR+LF+ + KDV+ W TMI GY +
Sbjct: 287 ------DRGFGKNLQLVNALVDMYSKCGEIGTARKLFDGMEDKDVILWNTMIGGYCHLSL 340
Query: 268 LSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVK----AGFDCYDF 323
EAL ++ ML + + PNDV + ++ AC A G +H+ I K G
Sbjct: 341 YEEALVLFEVMLRENVTPNDVTFLAVLPACASLGALDLGKWVHAYIDKNLKGTGNVNNVS 400
Query: 324 IQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRD 383
+ +II YA CG + +A F +ASWNA+I+G NG E
Sbjct: 401 LWTSIIVMYAKCGCVEVAEQVFRSMGSRSLASWNAMISGLAMNGHAE------------- 447
Query: 384 VYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHE 443
AL LF M++ G +P++IT V V A +G ++ G H
Sbjct: 448 ------------------RALGLFEEMINEGFQPDDITFVGVLSACTQAGFVELG---HR 486
Query: 444 YV--LNNSITLNDNLS--AAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAM 499
Y +N ++ L +ID+ A+ G + A +V + + W +++ +
Sbjct: 487 YFSSMNKDYGISPKLQHYGCMIDLLARSGKFDEA-KVLMGNMEMEPDGAIWGSLLNACRI 545
Query: 500 HGDANL 505
HG
Sbjct: 546 HGQVEF 551
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 89/386 (23%), Positives = 152/386 (39%), Gaps = 99/386 (25%)
Query: 13 QKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCG 72
Q+A++ S + +VS L C ++ G+ I S + G N + N+L+++Y+KCG
Sbjct: 251 QEADV--SPNQSTMVSVLSACGHLRSLELGKWIGSWVRDRGFGKNLQLVNALVDMYSKCG 308
Query: 73 LISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQ 132
I A+ +FD D + N MI GY C +S
Sbjct: 309 EIGTARKLFDGMEDKDVILWNTMIGGY-------------------CHLSL--------- 340
Query: 133 NDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMID----G 188
+ EAL +F M V PN+VT +V+ + LG + + +H + K +
Sbjct: 341 ---YEEALVLFEVMLRENVTPNDVTFLAVLPACASLGALDLGKWVHAYIDKNLKGTGNVN 397
Query: 189 FVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIP 248
V + T+++ MY C + A +F M R++ SWN M++G A G E A LFE
Sbjct: 398 NVSLWTSIIVMYAKCGCVEVAEQVFRSMGSRSLASWNAMISGLAMNGHAERALGLFEE-- 455
Query: 249 SKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQ 308
M+ +G P+D+ V ++SAC
Sbjct: 456 -----------------------------MINEGFQPDDITFVGVLSAC----------- 475
Query: 309 IHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGM 368
+AGF G + + + GI + + +I R+G
Sbjct: 476 -----TQAGF--------------VELGHRYFSSMNKDYGISPKLQHYGCMIDLLARSGK 516
Query: 369 IEDARQLFNNMQ-KRDVYSWSAMISG 393
++A+ L NM+ + D W ++++
Sbjct: 517 FDEAKVLMGNMEMEPDGAIWGSLLNA 542
>gi|224108621|ref|XP_002314911.1| predicted protein [Populus trichocarpa]
gi|222863951|gb|EEF01082.1| predicted protein [Populus trichocarpa]
Length = 743
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 202/626 (32%), Positives = 348/626 (55%), Gaps = 38/626 (6%)
Query: 40 SQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGY 99
+Q +++H LI KS TF+ N+LIN Y+K G I+ A+ +FD + + N M+S Y
Sbjct: 22 TQAKKLHCLIIKSLTNPETFLYNNLINAYSKLGNITYARHVFDKMPQPNSFSWNTMLSAY 81
Query: 100 IRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIP-NEVTL 158
++ L+ +E+F P + VS+ S+I G+ EA++ + M GV+ N +T
Sbjct: 82 SKSGDLSTMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKDGVLNLNRITF 141
Query: 159 ASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKE 218
++++ G + R +HG ++K +V + ++L++MY + A +FDE++E
Sbjct: 142 STMLLLVSSQGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSVASQVFDEVQE 201
Query: 219 RNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAM 278
RN+V +N M+ G ++G+V+ ++ LF + +D +SW TMI G +Q +EA+ ++R M
Sbjct: 202 RNVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEAEAMDLFRDM 261
Query: 279 LCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRI 338
+G+A + +++ACG A EG +IH++I+++G++ F+ + ++ Y C +
Sbjct: 262 RQEGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSALVDMYCKCRSV 321
Query: 339 NLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNE 398
A +F M ++V SW+AM+ GY QN
Sbjct: 322 RYAE-------------------------------AVFKRMANKNVVSWTAMLVGYGQNG 350
Query: 399 QPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSA 458
A+ +F M G++P++ T+ SV + A+ +L+EG H L + + +S
Sbjct: 351 FSEEAVRVFCDMQRNGIEPDDFTLGSVISSCANLASLEEGAQFHCQALVSGLISFITVSN 410
Query: 459 AIIDMYAKCGSINTAFEVFYHI--RDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKR 516
A+I +Y KCGSI + ++F + RD + W A++ G A G AN T+ ++ + +
Sbjct: 411 ALITLYGKCGSIEDSNQLFDEMSFRDEVS----WTALVSGYAQFGKANETIDLFERMLVQ 466
Query: 517 NIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLED 576
+K +++TFI VLS C AGLV+ G++YF+SM + + P HY CM+DL GRAG+LE+
Sbjct: 467 GLKPDAVTFIAVLSACSRAGLVERGQQYFESMLKDHGIIPFSDHYTCMIDLFGRAGRLEE 526
Query: 577 AEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYAD 636
A+ I MP D + W TLL++ R++GN E+G+ AA+SL L P + +LLS+IYA
Sbjct: 527 AKNFINKMPFSPDSIGWATLLSSCRLYGNEEIGKWAAESLLELDPQNPAGYILLSSIYAA 586
Query: 637 AGRWEDAFSIRKEMRDCGMKRLPGFS 662
G+W + +R+ MR+ G ++ PGFS
Sbjct: 587 KGKWSNVAQLRRGMREKGARKEPGFS 612
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 141/559 (25%), Positives = 246/559 (44%), Gaps = 84/559 (15%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+ + L S+ V G+QIH I K G + F+ +SL+++YAK GL+S A +FD
Sbjct: 139 ITFSTMLLLVSSQGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSVASQVFDE 198
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
+ V N MI+G +R+ + D++ +F + +S+T+MI G QN EA+++F
Sbjct: 199 VQERNVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEAEAMDLF 258
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
RDMR G+ ++ T SV+++ L + E + +H L+I+ + V + + L++MYC C
Sbjct: 259 RDMRQEGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSALVDMYCKC 318
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYL 263
S V A +F+R+ +K+VVSW M+ GY
Sbjct: 319 RS-------------------------------VRYAEAVFKRMANKNVVSWTAMLVGYG 347
Query: 264 QVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDF 323
Q EA+ ++ M +GI P+D + +IS+C + EG Q H + +G +
Sbjct: 348 QNGFSEEAVRVFCDMQRNGIEPDDFTLGSVISSCANLASLEEGAQFHCQALVSGLISFIT 407
Query: 324 IQATIIHFYAACGRINLARLQF-ELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ-- 380
+ +I Y CG I + F E+ +D + SW AL++G+ + G + LF M
Sbjct: 408 VSNALITLYGKCGSIEDSNQLFDEMSFRDEV-SWTALVSGYAQFGKANETIDLFERMLVQ 466
Query: 381 --KRDVYSWSAMISGYAQNEQPNMALELFHGMV-DAGVKPNEITMVSVFCAIASSGTLKE 437
K D ++ A++S ++ + F M+ D G+ P + +G L+E
Sbjct: 467 GLKPDAVTFIAVLSACSRAGLVERGQQYFESMLKDHGIIPFSDHYTCMIDLFGRAGRLEE 526
Query: 438 --------------------------------GRWAHEYVLNNSITLNDNLSAAII---D 462
G+WA E +L L+ A I
Sbjct: 527 AKNFINKMPFSPDSIGWATLLSSCRLYGNEEIGKWAAESLLE----LDPQNPAGYILLSS 582
Query: 463 MYAKCGSINTAFEVFYHIRDRTTSVSP---W----NAIICGLAMHGDANLTLKIYSDLEK 515
+YA G + ++ +R++ P W + + A + + +IY++LEK
Sbjct: 583 IYAAKGKWSNVAQLRRGMREKGARKEPGFSWIKYKSKVYIFSADDQSSPFSDQIYAELEK 642
Query: 516 RNIKLNSITFIGVLSTCCH 534
N K+ ++ S+ H
Sbjct: 643 LNHKMIEEGYVPDASSVLH 661
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 101/254 (39%), Gaps = 76/254 (29%)
Query: 13 QKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCG 72
Q+ ++ D+ L S + C+ ++ +G Q H SGL S + N+LI LY KCG
Sbjct: 363 QRNGIEPDDFTLG--SVISSCANLASLEEGAQFHCQALVSGLISFITVSNALITLYGKCG 420
Query: 73 LISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQ 132
I + +FD S D V+ ++SGY + + N
Sbjct: 421 SIEDSNQLFDEMSFRDEVSWTALVSGYAQFGKAN-------------------------- 454
Query: 133 NDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVII 192
E +++F M + G+ P+ VT +V+S+
Sbjct: 455 -----ETIDLFERMLVQGLKPDAVTFIAVLSA---------------------------- 481
Query: 193 STNLLNMYCVCSSLVE-ARSLFDEM-KERNIVS----WNVMLNGFAKAGLVELARELFER 246
C + LVE + F+ M K+ I+ + M++ F +AG +E A+ +
Sbjct: 482 --------CSRAGLVERGQQYFESMLKDHGIIPFSDHYTCMIDLFGRAGRLEEAKNFINK 533
Query: 247 IP-SKDVVSWGTMI 259
+P S D + W T++
Sbjct: 534 MPFSPDSIGWATLL 547
>gi|359491499|ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 766
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 213/588 (36%), Positives = 319/588 (54%), Gaps = 49/588 (8%)
Query: 77 AKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCW 136
A+ +F+ T D V+ N+MISG +R L AR +FD+ P + VS+ +M+ G+AQN
Sbjct: 99 ARQLFEKMPTRDLVSWNVMISGCVRYRNLRAARLLFDQMPERDVVSWNAMLSGYAQNGYV 158
Query: 137 REALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNL 196
+EA E+F +M N ++ ++++ V G I + R L + D +I +
Sbjct: 159 KEAKEIFDEM----PCKNSISWNGMLAAYVQNGRIEDARRL----FESKADWELISWNCM 210
Query: 197 LNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWG 256
+ Y + LV+AR +FD M ER+ VSWN M++G+A+ G + A+ LFE P +DV +W
Sbjct: 211 MGGYVKRNRLVDARGIFDRMPERDEVSWNTMISGYAQNGELLEAQRLFEESPVRDVFTWT 270
Query: 257 TMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKA 316
M+ GY+Q L EA ++ DG+ + + +
Sbjct: 271 AMVSGYVQNGMLDEARRVF-----DGMPEKNSVSWN------------------------ 301
Query: 317 GFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLF 376
II Y C R++ AR FE +++SWN +I G+ +NG I AR F
Sbjct: 302 ----------AIIAGYVQCKRMDQARELFEAMPCQNVSSWNTMITGYAQNGDIAQARNFF 351
Query: 377 NNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLK 436
+ M +RD SW+A+I+GYAQ+ AL LF M G + N T S A L+
Sbjct: 352 DRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALE 411
Query: 437 EGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICG 496
G+ H V+ + + A++ MY KCG+I+ A+ VF I ++ V WN +I G
Sbjct: 412 LGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEK--EVVSWNTMIAG 469
Query: 497 LAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEP 556
A HG L ++ ++K I + +T +GVLS C H GLVD G YF SM Y +
Sbjct: 470 YARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITA 529
Query: 557 DLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSL 616
+ KHY CM+DLLGRAG+L+DA+ ++++MP + D WG LL ASRIHGN E+GE+AAK +
Sbjct: 530 NSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAKMI 589
Query: 617 AGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
++P + VLLSN+YA +GRW D +R MRD G+K++PG+S V
Sbjct: 590 FEMEPDNSGMYVLLSNLYAASGRWGDVGRMRLRMRDRGVKKVPGYSWV 637
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 130/462 (28%), Positives = 222/462 (48%), Gaps = 43/462 (9%)
Query: 49 IFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDA 108
IF N+ N ++ Y + G I A+ +F+S + + ++ N M+ GY++ +RL DA
Sbjct: 164 IFDEMPCKNSISWNGMLAAYVQNGRIEDARRLFESKADWELISWNCMMGGYVKRNRLVDA 223
Query: 109 REVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHL 168
R +FD+ P + VS+ +MI G+AQN EA +F + + V T +++S V
Sbjct: 224 RGIFDRMPERDEVSWNTMISGYAQNGELLEAQRLFEESPVRDVF----TWTAMVSGYVQN 279
Query: 169 GGIWECR-MLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVM 227
G + E R + G+ K + II+ Y C + +AR LF+ M +N+ SWN M
Sbjct: 280 GMLDEARRVFDGMPEKNSVSWNAIIAG-----YVQCKRMDQARELFEAMPCQNVSSWNTM 334
Query: 228 LNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPND 287
+ G+A+ G + AR F+R+P +D +SW +I GY Q EAL ++ M DG N
Sbjct: 335 ITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNR 394
Query: 288 VMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFEL 347
+S C A G Q+H +VKAG + ++ ++ Y CG I+ A + FE
Sbjct: 395 STFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEG 454
Query: 348 GIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELF 407
+ + SWN +IAG+ R+G ++A LF +M+K
Sbjct: 455 IEEKEVVSWNTMIAGYARHGFGKEALMLFESMKK-------------------------- 488
Query: 408 HGMVDAGVKPNEITMVSVFCAIASSGTLKEG-RWAHEYVLNNSITLNDNLSAAIIDMYAK 466
G+ P+++TMV V A + +G + +G + + + IT N +ID+ +
Sbjct: 489 -----TGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGR 543
Query: 467 CGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLK 508
G ++ A + ++ + + W A++ +HG+ L K
Sbjct: 544 AGRLDDAQNLMKNMPFEPDAAT-WGALLGASRIHGNTELGEK 584
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 146/322 (45%), Gaps = 27/322 (8%)
Query: 337 RINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQ 396
+ LAR FE + SWN +I+G +R + AR LF+ M +RDV SW+AM+SGYAQ
Sbjct: 95 KFYLARQLFEKMPTRDLVSWNVMISGCVRYRNLRAARLLFDQMPERDVVSWNAMLSGYAQ 154
Query: 397 NEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLN-NSITLNDN 455
N A E+F D N I+ + A +G +++ R E + I+ N
Sbjct: 155 NGYVKEAKEIF----DEMPCKNSISWNGMLAAYVQNGRIEDARRLFESKADWELISWN-- 208
Query: 456 LSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEK 515
++ Y K + A +F + +R VS WN +I G A +G+ +++ +
Sbjct: 209 ---CMMGGYVKRNRLVDARGIFDRMPER-DEVS-WNTMISGYAQNGELLEAQRLFEESPV 263
Query: 516 RNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLE 575
R++ T+ ++S G++D R F M +V + ++ + +++
Sbjct: 264 RDV----FTWTAMVSGYVQNGMLDEARRVFDGMPEKNSVS-----WNAIIAGYVQCKRMD 314
Query: 576 DAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGP-SRVLLSNIY 634
A E+ +MP + +V W T++ +G++ A++ P S + Y
Sbjct: 315 QARELFEAMPCQ-NVSSWNTMITGYAQNGDIA----QARNFFDRMPQRDSISWAAIIAGY 369
Query: 635 ADAGRWEDAFSIRKEMRDCGMK 656
A +G E+A + EM+ G +
Sbjct: 370 AQSGYGEEALHLFVEMKRDGER 391
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 102/230 (44%), Gaps = 37/230 (16%)
Query: 25 ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSC 84
S L C+ A+ G+Q+H + K+GLES ++ N+L+ +Y KCG I A +F+
Sbjct: 396 TFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGI 455
Query: 85 STLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFR 144
+ V+ N MI+GY R+ GF +EAL +F
Sbjct: 456 EEKEVVSWNTMIAGYARH--------------------------GFG-----KEALMLFE 484
Query: 145 DMRILGVIPNEVTLASVISSSVHLGGIWE-CRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
M+ G++P++VT+ V+S+ H G + + + + I T ++++
Sbjct: 485 SMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRA 544
Query: 204 SSLVEARSLFDEMK-ERNIVSWNVMLNGFAKAGLVEL----ARELFERIP 248
L +A++L M E + +W +L G EL A+ +FE P
Sbjct: 545 GRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAKMIFEMEP 594
>gi|347954520|gb|AEP33760.1| organelle transcript processing 82, partial [Capsella
bursa-pastoris]
Length = 706
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 208/565 (36%), Positives = 311/565 (55%), Gaps = 37/565 (6%)
Query: 103 DRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVI 162
D L A VFD + + +M G A + AL ++ M LG++PN T ++
Sbjct: 51 DGLTYAISVFDSIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLVPNSYTFPFLL 110
Query: 163 SSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIV 222
+ E + +HG V+KL D + + T+L+ MY +AR +FD+ R++V
Sbjct: 111 KACAKSKAFREGQQIHGHVLKLGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQSSHRDVV 170
Query: 223 SWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDG 282
S+ ++ G+A G + A+++F+ IP KDVVSW +I GY + EAL +++ M+
Sbjct: 171 SYTALIKGYASNGYIXSAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMKTN 230
Query: 283 IAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLAR 342
+ P++ +V ++SAC ++ + G Q+HS I GF I +I Y CG + A
Sbjct: 231 VKPDESTMVTVLSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETAS 290
Query: 343 LQFE-LGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPN 401
FE L KD + SWN LI G+ + ++
Sbjct: 291 GLFEGLSYKD-VISWNTLIGGYTHMNLYKE------------------------------ 319
Query: 402 MALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLN--NSITLNDNLSAA 459
AL LF M+ +G PNE+TM+S+ A A G + GRW H Y+ ++ +L +
Sbjct: 320 -ALLLFQEMLRSGESPNEVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVSNPSSLRTS 378
Query: 460 IIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIK 519
+IDMYAKCG I A +VF + +R S+S WNA+I G AMHG AN I+S + K I+
Sbjct: 379 LIDMYAKCGDIEAAQQVFDSMLNR--SLSSWNAMIFGFAMHGRANPAFDIFSRMRKDGIE 436
Query: 520 LNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEE 579
+ ITF+G+LS C H+G++DLG F+SM Y + P L+HYGCM+DLLG +G ++AEE
Sbjct: 437 PDDITFVGLLSACSHSGMLDLGRHIFRSMTEDYKITPKLEHYGCMIDLLGHSGLFKEAEE 496
Query: 580 VIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGR 639
+I SM M D VIW +LL A ++HGNVE+GE A++L ++P + S VLLSNIYA AGR
Sbjct: 497 MINSMEMDPDGVIWCSLLKACKMHGNVELGESFAQNLIKIEPKNSGSYVLLSNIYATAGR 556
Query: 640 WEDAFSIRKEMRDCGMKRLPGFSGV 664
W + R + D GMK++PG S +
Sbjct: 557 WNEVAKRRALLNDKGMKKVPGCSSI 581
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 130/500 (26%), Positives = 224/500 (44%), Gaps = 67/500 (13%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
L+ C+ A +GQQIH + K G + + ++ SLI +Y K G A+ +FD S D
Sbjct: 110 LKACAKSKAFREGQQIHGHVLKLGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQSSHRDV 169
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
V+ +I GY N + A+++FD+ P+K VS+ ++I G+A+ ++EALE+F++M
Sbjct: 170 VSYTALIKGYASNGYIXSAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMKT 229
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
V P+E T+ +V+S+ I R +H + + I L+++Y C + A
Sbjct: 230 NVKPDESTMVTVLSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETA 289
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLS 269
LF+ + ++++SWN ++ G+ L +
Sbjct: 290 SGLFEGLSYKDVISWNTLIGGYTHMNLYK------------------------------- 318
Query: 270 EALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVK--AGFDCYDFIQAT 327
EAL +++ ML G +PN+V ++ ++ AC A G IH I K G ++ +
Sbjct: 319 EALLLFQEMLRSGESPNEVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVSNPSSLRTS 378
Query: 328 IIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSW 387
+I YA CG I A+ F+ + ++SWNA+I GF +G
Sbjct: 379 LIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHG-------------------- 418
Query: 388 SAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLN 447
+ N A ++F M G++P++IT V + A + SG L GR +
Sbjct: 419 -----------RANPAFDIFSRMRKDGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTE 467
Query: 448 N-SITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLT 506
+ IT +ID+ G A E+ + V W +++ MHG+ L
Sbjct: 468 DYKITPKLEHYGCMIDLLGHSGLFKEAEEMINSMEMDPDGVI-WCSLLKACKMHGNVELG 526
Query: 507 LKIYSDLEKRNIKLNSITFI 526
+L K K NS +++
Sbjct: 527 ESFAQNLIKIEPK-NSGSYV 545
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 129/289 (44%), Gaps = 64/289 (22%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E +V+ L C+ ++ G+Q+HS I G SN I N+LI+LY KCG + A +F+
Sbjct: 235 ESTMVTVLSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETASGLFE 294
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
S D ++ N +I G YT M + ++EAL +
Sbjct: 295 GLSYKDVISWNTLIGG------------------------YTHM-------NLYKEALLL 323
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLM--IDGFVIISTNLLNMY 200
F++M G PNEVT+ S++ + HLG I R +H + K + + + T+L++MY
Sbjct: 324 FQEMLRSGESPNEVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVSNPSSLRTSLIDMY 383
Query: 201 CVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMID 260
C + A+ +FD M R++ SWN M+ GFA G A ++F R
Sbjct: 384 AKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANPAFDIFSR-------------- 429
Query: 261 GYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQI 309
M DGI P+D+ V L+SAC + G I
Sbjct: 430 -----------------MRKDGIEPDDITFVGLLSACSHSGMLDLGRHI 461
>gi|347954528|gb|AEP33764.1| organelle transcript processing 82, partial [Iberis amara]
Length = 666
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 208/565 (36%), Positives = 316/565 (55%), Gaps = 37/565 (6%)
Query: 103 DRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVI 162
D L A VF+ + + +M G A + AL+++ M LG++PN T ++
Sbjct: 39 DGLPYAISVFETIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLL 98
Query: 163 SSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIV 222
S E + +HG V+KL D + + T+L++MY L +A +FDE R++V
Sbjct: 99 KSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDESPHRDVV 158
Query: 223 SWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDG 282
S+ ++ G+A G +E A+++F+ IP KDVVSW MI GY + EAL +++ M+
Sbjct: 159 SYTALIKGYASRGYIENAQKMFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTN 218
Query: 283 IAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLAR 342
+ P++ +V ++SAC ++ + G Q+HS I GF I +I Y+ CG + A
Sbjct: 219 VRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGELETAC 278
Query: 343 LQFE-LGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPN 401
FE L KD + SWN LI G+ + ++
Sbjct: 279 GLFEGLPYKD-VISWNTLIGGYTHMNLYKE------------------------------ 307
Query: 402 MALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLN--NSITLNDNLSAA 459
AL LF M+ +G PN++TM+S+ A A G + GRW H Y+ + +L +
Sbjct: 308 -ALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVANASSLRTS 366
Query: 460 IIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIK 519
+IDMYAKCG I A +VF I + S+S WNA+I G AMHG A+ + I+S + K I+
Sbjct: 367 LIDMYAKCGDIEAAHQVFNSILHK--SLSSWNAMIFGFAMHGRADASFDIFSRMRKNGIE 424
Query: 520 LNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEE 579
+ ITF+G+LS C H+G++DLG F+SM Y + P L+HYGCM+DLLG +G ++AEE
Sbjct: 425 PDDITFVGLLSACSHSGMLDLGRHIFRSMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEE 484
Query: 580 VIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGR 639
+I +M M+ D VIW +LL A ++HGNVE+GE A++L ++P + S VLLSNIYA AGR
Sbjct: 485 MINTMEMEPDGVIWCSLLKACKMHGNVELGESFAQNLIKIEPENPGSYVLLSNIYATAGR 544
Query: 640 WEDAFSIRKEMRDCGMKRLPGFSGV 664
W + + R + D GMK++PG S +
Sbjct: 545 WNEVANTRALLNDKGMKKVPGCSSI 569
Score = 185 bits (469), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 129/483 (26%), Positives = 213/483 (44%), Gaps = 74/483 (15%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
L+ C+ A +GQQIH + K G + + ++ SLI++Y + G + A +FD D
Sbjct: 98 LKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDESPHRDV 157
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
V+ +I GY + +A+++FD+ P+K VS+ +MI G+A+ ++EALE+F+DM
Sbjct: 158 VSYTALIKGYASRGYIENAQKMFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKT 217
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
V P+E T+ +V+S+ G I R +H + + I L+++Y C L A
Sbjct: 218 NVRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGELETA 277
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLS 269
LF+ + ++++SWN + I GY +
Sbjct: 278 CGLFEGLPYKDVISWNTL-------------------------------IGGYTHMNLYK 306
Query: 270 EALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVK--AGFDCYDFIQAT 327
EAL +++ ML G PNDV ++ ++ AC A G IH I K G ++ +
Sbjct: 307 EALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVANASSLRTS 366
Query: 328 IIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSW 387
+I YA CG I A F + ++SWNA+I GF +G + + +F+ M+K
Sbjct: 367 LIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDIFSRMRKN----- 421
Query: 388 SAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLN 447
G++P++IT V + A + SG L GR +
Sbjct: 422 --------------------------GIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQ 455
Query: 448 N-SITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGL----AMHGD 502
+ +T +ID+ G A E+ T + P I C L MHG+
Sbjct: 456 DYKMTPKLEHYGCMIDLLGHSGLFKEAEEMI-----NTMEMEPDGVIWCSLLKACKMHGN 510
Query: 503 ANL 505
L
Sbjct: 511 VEL 513
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 129/289 (44%), Gaps = 64/289 (22%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E +V+ + C+ ++ G+Q+HS I G SN I N+LI+LY+KCG + A +F+
Sbjct: 223 ESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFE 282
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
D ++ N +I G YT M + ++EAL +
Sbjct: 283 GLPYKDVISWNTLIGG------------------------YTHM-------NLYKEALLL 311
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLM--IDGFVIISTNLLNMY 200
F++M G PN+VT+ S++ + HLG I R +H + K + + + T+L++MY
Sbjct: 312 FQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVANASSLRTSLIDMY 371
Query: 201 CVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMID 260
C + A +F+ + +++ SWN M+ GFA G + + ++F R
Sbjct: 372 AKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDIFSR-------------- 417
Query: 261 GYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQI 309
M +GI P+D+ V L+SAC + G I
Sbjct: 418 -----------------MRKNGIEPDDITFVGLLSACSHSGMLDLGRHI 449
>gi|356519383|ref|XP_003528352.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Glycine max]
Length = 614
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 206/642 (32%), Positives = 342/642 (53%), Gaps = 70/642 (10%)
Query: 27 VSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCST 86
+S L+ C + +SQ +QI + IF GL+ + N L+ S S+ D
Sbjct: 12 ISLLKSCKS---MSQLKQIQAHIFCVGLQQDRDTLNKLMAF-------SMDSSLGD---- 57
Query: 87 LDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDM 146
N A +F+ Y MI F ++ +R A+ +F+ +
Sbjct: 58 ------------------FNYANRIFNYIHDPSLFIYNLMIKAFVKSGSFRSAISLFQQL 99
Query: 147 RILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSL 206
R GV P+ T V+ +G + E +H V+K ++ + + ++MY
Sbjct: 100 REHGVWPDNYTYPYVLKGIGCIGEVREGEKVHAFVVKTGLEFDPYVCNSFMDMY------ 153
Query: 207 VEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVE 266
A+ GLVE ++FE +P +D VSW MI GY++ +
Sbjct: 154 -------------------------AELGLVEGFTQVFEEMPDRDAVSWNIMISGYVRCK 188
Query: 267 RLSEALTMYRAMLCDG-IAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQ 325
R EA+ +YR M + PN+ +V +SAC G +IH I + D +
Sbjct: 189 RFEEAVDVYRRMWTESNEKPNEATVVSTLSACAVLRNLELGKEIHDYIA-SELDLTTIMG 247
Query: 326 ATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVY 385
++ Y CG +++AR F+ ++ W +++ G++ G ++ AR LF RD+
Sbjct: 248 NALLDMYCKCGHVSVAREIFDAMTVKNVNCWTSMVTGYVICGQLDQARNLFERSPSRDIV 307
Query: 386 SWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYV 445
W+AMI+GY Q + + LF M GVKP++ +V++ A SG L++G+W H Y+
Sbjct: 308 LWTAMINGYVQFNRFEETIALFGEMQIRGVKPDKFIVVTLLTGCAQSGALEQGKWIHNYI 367
Query: 446 LNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANL 505
N I ++ + A+I+MYAKCG I +FE+F ++++ T + W +IICGLAM+G +
Sbjct: 368 DENRIKVDAVVGTALIEMYAKCGCIEKSFEIFNGLKEKDT--TSWTSIICGLAMNGKPSE 425
Query: 506 TLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMV 565
L+++ ++ +K + ITF+ VLS C HAGLV+ G + F SM S+Y++EP+L+HYGC +
Sbjct: 426 ALELFKAMQTCGLKPDDITFVAVLSACSHAGLVEEGRKLFHSMSSMYHIEPNLEHYGCFI 485
Query: 566 DLLGRAGQLEDAEEVIRSMPMKADVVI---WGTLLAASRIHGNVEVGERAAKSLAGLQPS 622
DLLGRAG L++AEE+++ +P + + +I +G LL+A R +GN+++GER A +LA ++ S
Sbjct: 486 DLLGRAGLLQEAEELVKKLPAQNNEIIVPLYGALLSACRTYGNIDMGERLATALAKVKSS 545
Query: 623 HGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
LL++IYA A RWED +R +M+D G+K++PG+S +
Sbjct: 546 DSSLHTLLASIYASADRWEDVRKVRNKMKDLGIKKVPGYSAI 587
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 151/291 (51%), Gaps = 33/291 (11%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E +VS L C+ + G++IH I S L+ T + N+L+++Y KCG +S A+ +FD
Sbjct: 210 EATVVSTLSACAVLRNLELGKEIHDYI-ASELDLTTIMGNALLDMYCKCGHVSVAREIFD 268
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+ + + M++GY+ +L+ AR +F+++P + V +T+MI G+ Q + + E + +
Sbjct: 269 AMTVKNVNCWTSMVTGYVICGQLDQARNLFERSPSRDIVLWTAMINGYVQFNRFEETIAL 328
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
F +M+I GV P++ + ++++ G + + + +H + + I ++ T L+ MY
Sbjct: 329 FGEMQIRGVKPDKFIVVTLLTGCAQSGALEQGKWIHNYIDENRIKVDAVVGTALIEMYAK 388
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
C + ++ +F+ +KE++ SW ++ G A G
Sbjct: 389 CGCIEKSFEIFNGLKEKDTTSWTSIICGLAMNG--------------------------- 421
Query: 263 LQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQI-HSI 312
+ SEAL +++AM G+ P+D+ V ++SAC A EG ++ HS+
Sbjct: 422 ----KPSEALELFKAMQTCGLKPDDITFVAVLSACSHAGLVEEGRKLFHSM 468
>gi|168023826|ref|XP_001764438.1| predicted protein [Physcomitrella patens subsp. patens]
gi|54695178|dbj|BAD67154.1| PpPPR_91 [Physcomitrella patens]
gi|162684302|gb|EDQ70705.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 868
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 208/668 (31%), Positives = 342/668 (51%), Gaps = 71/668 (10%)
Query: 2 PLDHFHSVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQ 61
P F + AN++ + + +S L+ C+ + + +G++IH+++ G+E++ +
Sbjct: 138 PAKAFDTFERMTDANIEPN--RITFLSILKACNNYSILEKGRKIHTIVKAMGMETDVAVA 195
Query: 62 NSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCV 121
+LI +Y+KCG IS VAC EVF K + V
Sbjct: 196 TALITMYSKCGEIS--------------VAC-----------------EVFHKMTERNVV 224
Query: 122 SYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLV 181
S+T++I AQ+ EA E++ M G+ PN VT S+++S + R +H +
Sbjct: 225 SWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHI 284
Query: 182 IKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELAR 241
+ ++ +I++ L+ MYC C+S+ EA R
Sbjct: 285 SERGLETDMIVANALITMYCKCNSVQEA-------------------------------R 313
Query: 242 ELFERIPSKDVVSWGTMIDGYLQV-----ERLSEALTMYRAMLCDGIAPNDVMIVDLISA 296
E+F+R+ +DV+SW MI GY Q E + E + M +G+ PN V + ++ A
Sbjct: 314 EIFDRMSKRDVISWSAMIAGYAQSGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRA 373
Query: 297 CGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASW 356
C A +G QIH+ + K GF+ +Q I + YA CG I A F ++ +W
Sbjct: 374 CTAHGALEQGRQIHAELSKVGFELDRSLQTAIFNMYAKCGSIYEAEQVFSKMANKNVVAW 433
Query: 357 NALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVK 416
+ ++ +I+ G + A ++F+ M R+V SW+ MI+GYAQN EL M G +
Sbjct: 434 TSFLSMYIKCGDLSSAEKVFSEMPTRNVVSWNLMIAGYAQNGDIVKVFELLSSMKAEGFQ 493
Query: 417 PNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEV 476
P+ +T++++ A + L+ G+ H + + + ++ ++I MY+KCG + A V
Sbjct: 494 PDRVTVITILEACGALAGLERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGQVAEARTV 553
Query: 477 FYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAG 536
F + +R T WNA++ G HGD + ++ + K + N IT V+S C AG
Sbjct: 554 FDKMSNRDTVA--WNAMLAGYGQHGDGLEAVDLFKRMLKERVSPNEITLTAVISACSRAG 611
Query: 537 LVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTL 596
LV G F+ M+ + + P +HYGCMVDLLGRAG+L++AEE I+SMP + D+ +W L
Sbjct: 612 LVQEGREIFRMMQEDFKMTPRKQHYGCMVDLLGRAGRLQEAEEFIQSMPCEPDISVWHAL 671
Query: 597 LAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMK 656
L A + H NV++ ERAA + L+PS+ + LSNIYA AGRW+D+ +R+ M D G+K
Sbjct: 672 LGACKSHNNVQLAERAAHHILELEPSYASVYITLSNIYAQAGRWDDSTKVRRVMDDRGLK 731
Query: 657 RLPGFSGV 664
+ G S +
Sbjct: 732 KDRGESSI 739
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 145/605 (23%), Positives = 254/605 (41%), Gaps = 119/605 (19%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
+ +C+ G+ +H + + G+E + ++ NSLIN Y+K F+ ++
Sbjct: 63 IEHCAKARRFEDGKMVHKQLDELGVEIDIYLGNSLINFYSK----------FEDVAS--- 109
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
A +VF + ++ V+++SMI +A N+ +A + F M
Sbjct: 110 ------------------AEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTDA 151
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
+ PN +T S++ + + + + R +H +V + ++ V ++T L+ MY C + A
Sbjct: 152 NIEPNRITFLSILKACNNYSILEKGRKIHTIVKAMGMETDVAVATALITMYSKCGEISVA 211
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLS 269
+F +M ERN+VSW ++ A Q +L+
Sbjct: 212 CEVFHKMTERNVVSWTAIIQANA-------------------------------QHRKLN 240
Query: 270 EALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATII 329
EA +Y ML GI+PN V V L+++C A G +IHS I + G + + +I
Sbjct: 241 EAFELYEQMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDMIVANALI 300
Query: 330 HFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSA 389
Y C + AR F+ K + SW+A+IAG+ +
Sbjct: 301 TMYCKCNSVQEAREIFDRMSKRDVISWSAMIAGYAQ------------------------ 336
Query: 390 MISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNS 449
SGY E + +L M GV PN++T +S+ A + G L++GR H +
Sbjct: 337 --SGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHGALEQGRQIHAELSKVG 394
Query: 450 ITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDR-------------------------- 483
L+ +L AI +MYAKCGSI A +VF + ++
Sbjct: 395 FELDRSLQTAIFNMYAKCGSIYEAEQVFSKMANKNVVAWTSFLSMYIKCGDLSSAEKVFS 454
Query: 484 ---TTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDL 540
T +V WN +I G A +GD ++ S ++ + + +T I +L C ++
Sbjct: 455 EMPTRNVVSWNLMIAGYAQNGDIVKVFELLSSMKAEGFQPDRVTVITILEACGALAGLER 514
Query: 541 GERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAAS 600
G + + +E D ++ + + GQ+ +A V M + D V W +LA
Sbjct: 515 G-KLVHAEAVKLGLESDTVVATSLIGMYSKCGQVAEARTVFDKMSNR-DTVAWNAMLAGY 572
Query: 601 RIHGN 605
HG+
Sbjct: 573 GQHGD 577
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 117/468 (25%), Positives = 203/468 (43%), Gaps = 57/468 (12%)
Query: 164 SSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLL----NMY-CVCSSLVEARSL------ 212
+SV G +W R+ ++ I II L N Y CV +AR
Sbjct: 21 TSVSGGEVW--RLCKAGRLREAIQLLGIIKQRGLLVNSNTYGCVIEHCAKARRFEDGKMV 78
Query: 213 ---FDEMK-ERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERL 268
DE+ E +I N ++N ++K V A ++F R+ +DVV+W +MI Y
Sbjct: 79 HKQLDELGVEIDIYLGNSLINFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHP 138
Query: 269 SEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATI 328
++A + M I PN + + ++ AC +G +IH+I+ G + + +
Sbjct: 139 AKAFDTFERMTDANIEPNRITFLSILKACNNYSILEKGRKIHTIVKAMGMETDVAVATAL 198
Query: 329 IHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWS 388
I Y+ CG I++A F + ++ SW +
Sbjct: 199 ITMYSKCGEISVACEVFHKMTERNVVSW-------------------------------T 227
Query: 389 AMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNN 448
A+I AQ+ + N A EL+ M+ AG+ PN +T VS+ + + L GR H ++
Sbjct: 228 AIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISER 287
Query: 449 SITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHG--DANLT 506
+ + ++ A+I MY KC S+ A E+F + R V W+A+I G A G D
Sbjct: 288 GLETDMIVANALITMYCKCNSVQEAREIFDRMSKR--DVISWSAMIAGYAQSGYKDKESI 345
Query: 507 LKIYSDLE---KRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGC 563
+++ LE + + N +TF+ +L C G ++ G + + V E D
Sbjct: 346 DEVFQLLERMRREGVFPNKVTFMSILRACTAHGALEQGRQIHAELSKV-GFELDRSLQTA 404
Query: 564 MVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGER 611
+ ++ + G + +AE+V M K +VV W + L+ G++ E+
Sbjct: 405 IFNMYAKCGSIYEAEQVFSKMANK-NVVAWTSFLSMYIKCGDLSSAEK 451
>gi|347954522|gb|AEP33761.1| organelle transcript processing 82, partial [Crucihimalaya
wallichii]
Length = 710
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 211/566 (37%), Positives = 317/566 (56%), Gaps = 39/566 (6%)
Query: 103 DRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVI 162
D L A VF+ + + +M G A + AL ++ M LG++PN T ++
Sbjct: 51 DGLPYAISVFETIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLL 110
Query: 163 SSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIV 222
S E + +HG V+KL D + + T+L++MY L +AR +FD+ R++V
Sbjct: 111 KSCAKSKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVV 170
Query: 223 SWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDG 282
S+ ++ G+A G + A+++F+ IP KDVVSW MI GY + EAL +++ M+
Sbjct: 171 SYTALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTN 230
Query: 283 IAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLAR 342
+ P++ +V ++SAC ++ + G Q+HS I GF I +I Y CG + A
Sbjct: 231 VRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETAC 290
Query: 343 LQFE-LGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPN 401
FE L KD + SWN LI G+ + ++
Sbjct: 291 GLFEGLSYKD-VISWNTLIGGYTHMNLYKE------------------------------ 319
Query: 402 MALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSA--- 458
AL LF M+ +G PN++TM+S+ A A G ++ GRW H Y+ N + N S+
Sbjct: 320 -ALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYI-NKRLKGVANASSHRT 377
Query: 459 AIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNI 518
++IDMYAKCG I A +VF I +R S+S WNA+I G AMHG AN I+S + K I
Sbjct: 378 SLIDMYAKCGDIEAAQQVFDSILNR--SLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEI 435
Query: 519 KLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAE 578
+ + ITF+G+LS C H+G++DLG F+SMK Y + P L+HYGCM+DLLG +G ++AE
Sbjct: 436 EPDDITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAE 495
Query: 579 EVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAG 638
E+I +M M+ D VIW +LL A +++ NVE+GE A++L ++P + S VLLSNIYA AG
Sbjct: 496 EMINTMEMEPDGVIWCSLLKACKMYANVELGESYAQNLIKIEPKNPGSYVLLSNIYATAG 555
Query: 639 RWEDAFSIRKEMRDCGMKRLPGFSGV 664
RW + IR + D GMK++PG S +
Sbjct: 556 RWNEVAKIRALLNDKGMKKVPGCSSI 581
Score = 175 bits (444), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 125/471 (26%), Positives = 210/471 (44%), Gaps = 70/471 (14%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
L+ C+ A +GQQIH + K G + + ++ SLI++Y + G + A+ +FD S D
Sbjct: 110 LKSCAKSKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDV 169
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
V+ +I+GY + A+++FD+ PIK VS+ +MI G+A+ +EALE+F++M
Sbjct: 170 VSYTALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKT 229
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
V P+E T+ SV+S+ I R +H + + I L+++Y C + A
Sbjct: 230 NVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETA 289
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLS 269
LF+ + ++++SWN ++ G+ L +
Sbjct: 290 CGLFEGLSYKDVISWNTLIGGYTHMNLYK------------------------------- 318
Query: 270 EALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVK--AGFDCYDFIQAT 327
EAL +++ ML G +PNDV ++ ++ AC A G IH I K G + +
Sbjct: 319 EALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTS 378
Query: 328 IIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSW 387
+I YA CG I A+ F+ + ++SWNA+I GF +G A +F+ M+K +
Sbjct: 379 LIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNE---- 434
Query: 388 SAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLN 447
++P++IT V + A + SG L GR +
Sbjct: 435 ---------------------------IEPDDITFVGLLSACSHSGMLDLGRHIFRSMKE 467
Query: 448 N-SITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGL 497
+ IT +ID+ G A E+ T + P I C L
Sbjct: 468 DYKITPKLEHYGCMIDLLGHSGLFKEAEEMI-----NTMEMEPDGVIWCSL 513
Score = 108 bits (271), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 128/290 (44%), Gaps = 66/290 (22%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E +VS + C+ ++ G+Q+HS I G SN I N+LI+LY KCG + A +F+
Sbjct: 235 ESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFE 294
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
S D ++ N +I G YT M + ++EAL +
Sbjct: 295 GLSYKDVISWNTLIGG------------------------YTHM-------NLYKEALLL 323
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIIS---TNLLNM 199
F++M G PN+VT+ S++ + HLG I R +H + I + G S T+L++M
Sbjct: 324 FQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIH-VYINKRLKGVANASSHRTSLIDM 382
Query: 200 YCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMI 259
Y C + A+ +FD + R++ SWN M+ GFA G A ++F R+ +
Sbjct: 383 YAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNE-------- 434
Query: 260 DGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQI 309
I P+D+ V L+SAC + G I
Sbjct: 435 -----------------------IEPDDITFVGLLSACSHSGMLDLGRHI 461
>gi|147857367|emb|CAN80796.1| hypothetical protein VITISV_034275 [Vitis vinifera]
Length = 771
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 211/635 (33%), Positives = 326/635 (51%), Gaps = 93/635 (14%)
Query: 28 SALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTL 87
S L+ C G++IH + K GL+ + F+ N+L+ +Y +C + A
Sbjct: 99 SVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYA---------- 148
Query: 88 DPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMR 147
R VFDK + VS+++MI ++N + ALE+ R+M
Sbjct: 149 ---------------------RLVFDKMMERDVVSWSTMIRSLSRNKEFDMALELIREMN 187
Query: 148 ILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLV 207
+ V P+EV + S+++ + + +H VI+ ++N +M
Sbjct: 188 FMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIR---------NSNNEHM-------- 230
Query: 208 EARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVER 267
+ + +L+ +AK G + LAR+LF + K VVSW MI G ++ R
Sbjct: 231 ------------GVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNR 278
Query: 268 LSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQAT 327
L E ++ M + I PN++ ++ LI CG A G Q+H+ I++ GF +
Sbjct: 279 LEEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNGFSVSLALATA 338
Query: 328 IIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSW 387
++ Y C I +AR LF++ Q RDV W
Sbjct: 339 LVDMYGKCSDI-------------------------------RNARALFDSTQNRDVMIW 367
Query: 388 SAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLN 447
+AM+S YAQ + A LF M +GV+P ++T+VS+ A +G L G+W H Y+
Sbjct: 368 TAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDK 427
Query: 448 NSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTL 507
+ ++ L+ A++DMYAKCG IN A +F R + WNAII G AMHG L
Sbjct: 428 ERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISR--DICMWNAIITGFAMHGYGEEAL 485
Query: 508 KIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDL 567
I++++E++ +K N ITFIG+L C HAGLV G++ F+ M + + P ++HYGCMVDL
Sbjct: 486 DIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDL 545
Query: 568 LGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSR 627
LGRAG L++A E+I+SMP+K + ++WG L+AA R+H N ++GE AA L ++P +
Sbjct: 546 LGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQLGELAATQLLEIEPENCGYN 605
Query: 628 VLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
VL+SNIYA A RW DA +RK M+ GMK+ PG S
Sbjct: 606 VLMSNIYAAANRWSDAAGVRKTMKTVGMKKEPGHS 640
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/382 (21%), Positives = 152/382 (39%), Gaps = 93/382 (24%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E+ ++S + C A+ G+Q+H+ I ++G + + +L+++Y KC I A+++FD
Sbjct: 298 EITMLSLIVECGFTGALQLGKQLHAYILRNGFSVSLALATALVDMYGKCSDIRNARALFD 357
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
S D + M+S Y AQ +C +A +
Sbjct: 358 STQNRDVMIWTAMLSAY-------------------------------AQANCIDQAFNL 386
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
F MR GV P +VT+ S++S G + + +H + K ++ I++T L++MY
Sbjct: 387 FDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAK 446
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
C + A LF E R+I WN ++ GFA G E
Sbjct: 447 CGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGE------------------------ 482
Query: 263 LQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD 322
EAL ++ M G+ PND+ + L+ AC A EG ++ +V
Sbjct: 483 -------EALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHT------ 529
Query: 323 FIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ-K 381
G+ I + ++ R G++++A ++ +M K
Sbjct: 530 ------------------------FGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIK 565
Query: 382 RDVYSWSAMISGYAQNEQPNMA 403
+ W A+++ ++ P +
Sbjct: 566 PNTIVWGALVAACRLHKNPQLG 587
>gi|356511263|ref|XP_003524346.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 763
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 218/617 (35%), Positives = 327/617 (52%), Gaps = 51/617 (8%)
Query: 49 IFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDA 108
+F S ++ N++I+ Y + S A+ +FD D + N+M++GY+RN RL +A
Sbjct: 68 VFNSMPRRSSVSYNAMISGYLRNAKFSLARDLFDKMPERDLFSWNVMLTGYVRNRRLGEA 127
Query: 109 REVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHL 168
++FD P K VS+ +M+ G+AQN EA EVF M N ++ ++++ VH
Sbjct: 128 HKLFDLMPKKDVVSWNAMLSGYAQNGFVDEAREVFNKM----PHRNSISWNGLLAAYVHN 183
Query: 169 GGIWECRMLHGLVIKLMIDGFVIISTN-LLNMYCVCSSLVEARSLFDEMKERNIVSWNVM 227
G + E R L + +IS N L+ Y + L +AR LFD M R+++SWN M
Sbjct: 184 GRLKEARRLFE-----SQSNWELISWNCLMGGYVKRNMLGDARQLFDRMPVRDVISWNTM 238
Query: 228 LNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPND 287
++G+A+ G + A+ LF P +DV +W M+ GY+Q + EA + M +
Sbjct: 239 ISGYAQVGDLSQAKRLFNESPIRDVFTWTAMVSGYVQNGMVDEARKYFDEMPVKNEISYN 298
Query: 288 VMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFEL 347
M+ AG+ Y ++ +A FE
Sbjct: 299 AML-------------------------AGYVQYK--------------KMVIAGELFEA 319
Query: 348 GIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELF 407
+I+SWN +I G+ +NG I AR+LF+ M +RD SW+A+ISGYAQN AL +F
Sbjct: 320 MPCRNISSWNTMITGYGQNGGIAQARKLFDMMPQRDCVSWAAIISGYAQNGHYEEALNMF 379
Query: 408 HGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKC 467
M G N T A L+ G+ H V+ + A++ MY KC
Sbjct: 380 VEMKRDGESSNRSTFSCALSTCADIAALELGKQVHGQVVKAGFETGCFVGNALLGMYFKC 439
Query: 468 GSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIG 527
GS + A +VF I ++ V WN +I G A HG L ++ ++K +K + IT +G
Sbjct: 440 GSTDEANDVFEGIEEK--DVVSWNTMIAGYARHGFGRQALVLFESMKKAGVKPDEITMVG 497
Query: 528 VLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMK 587
VLS C H+GL+D G YF SM YNV+P KHY CM+DLLGRAG+LE+AE ++R+MP
Sbjct: 498 VLSACSHSGLIDRGTEYFYSMDRDYNVKPTSKHYTCMIDLLGRAGRLEEAENLMRNMPFD 557
Query: 588 ADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIR 647
WG LL ASRIHGN E+GE+AA+ + ++P + VLLSN+YA +GRW D +R
Sbjct: 558 PGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDVGKMR 617
Query: 648 KEMRDCGMKRLPGFSGV 664
+MR+ G++++ G+S V
Sbjct: 618 SKMREAGVQKVTGYSWV 634
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 121/446 (27%), Positives = 208/446 (46%), Gaps = 60/446 (13%)
Query: 192 ISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKD 251
IS+++ N +C A +F+ M R+ VS+N M++G+ + LAR+LF+++P +D
Sbjct: 53 ISSHMRNGHCD-----SALRVFNSMPRRSSVSYNAMISGYLRNAKFSLARDLFDKMPERD 107
Query: 252 VVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHS 311
+ SW M+ GY++ RL EA ++ M + + M +S + E ++ +
Sbjct: 108 LFSWNVMLTGYVRNRRLGEAHKLFDLMPKKDVVSWNAM----LSGYAQNGFVDEAREVFN 163
Query: 312 IIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIED 371
+ ++ + A +H GR+ AR FE + SWN L+ G+++ M+ D
Sbjct: 164 KMPHRNSISWNGLLAAYVH----NGRLKEARRLFESQSNWELISWNCLMGGYVKRNMLGD 219
Query: 372 ARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIAS 431
ARQLF+ M RDV SW+ MISGYAQ + A LF+ ++ ++ + T ++
Sbjct: 220 ARQLFDRMPVRDVISWNTMISGYAQVGDLSQAKRLFN---ESPIR-DVFTWTAMVSGYVQ 275
Query: 432 SGTLKEGR-WAHEYVLNNSITLNDNLSA--------------------------AIIDMY 464
+G + E R + E + N I+ N L+ +I Y
Sbjct: 276 NGMVDEARKYFDEMPVKNEISYNAMLAGYVQYKKMVIAGELFEAMPCRNISSWNTMITGY 335
Query: 465 AKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSIT 524
+ G I A ++F + R W AII G A +G L ++ ++++ N T
Sbjct: 336 GQNGGIAQARKLFDMMPQR--DCVSWAAIISGYAQNGHYEEALNMFVEMKRDGESSNRST 393
Query: 525 FIGVLSTCCHAGLVDLGER-YFKSMKSVYNVEPDLKHYGCMVD--LLG---RAGQLEDAE 578
F LSTC ++LG++ + + +K+ + GC V LLG + G ++A
Sbjct: 394 FSCALSTCADIAALELGKQVHGQVVKAGFET-------GCFVGNALLGMYFKCGSTDEAN 446
Query: 579 EVIRSMPMKADVVIWGTLLAASRIHG 604
+V + K DVV W T++A HG
Sbjct: 447 DVFEGIEEK-DVVSWNTMIAGYARHG 471
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 69/143 (48%), Gaps = 31/143 (21%)
Query: 29 ALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLD 88
AL C+ A+ G+Q+H + K+G E+ F+ N+L+ +Y KCG +A +F+ D
Sbjct: 397 ALSTCADIAALELGKQVHGQVVKAGFETGCFVGNALLGMYFKCGSTDEANDVFEGIEEKD 456
Query: 89 PVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRI 148
V+ N MI+GY R+ GF R+AL +F M+
Sbjct: 457 VVSWNTMIAGYARH--------------------------GFG-----RQALVLFESMKK 485
Query: 149 LGVIPNEVTLASVISSSVHLGGI 171
GV P+E+T+ V+S+ H G I
Sbjct: 486 AGVKPDEITMVGVLSACSHSGLI 508
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 79/357 (22%), Positives = 149/357 (41%), Gaps = 71/357 (19%)
Query: 353 IASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELF----- 407
I +WN I+ +RNG + A ++FN+M +R S++AMISGY +N + ++A +LF
Sbjct: 46 IVTWNKAISSHMRNGHCDSALRVFNSMPRRSSVSYNAMISGYLRNAKFSLARDLFDKMPE 105
Query: 408 ----------------------HGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYV 445
H + D K + ++ ++ A +G + E R +
Sbjct: 106 RDLFSWNVMLTGYVRNRRLGEAHKLFDLMPKKDVVSWNAMLSGYAQNGFVDEAREVFNKM 165
Query: 446 LN-NSITLNDNLSAAI--------------------------IDMYAKCGSINTAFEVFY 478
+ NSI+ N L+A + + Y K + A ++F
Sbjct: 166 PHRNSISWNGLLAAYVHNGRLKEARRLFESQSNWELISWNCLMGGYVKRNMLGDARQLFD 225
Query: 479 HIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLV 538
+ R V WN +I G A GD + +++++ R++ T+ ++S G+V
Sbjct: 226 RMPVR--DVISWNTMISGYAQVGDLSQAKRLFNESPIRDV----FTWTAMVSGYVQNGMV 279
Query: 539 DLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLA 598
D +YF M + Y M+ + ++ A E+ +MP + ++ W T++
Sbjct: 280 DEARKYFDEMPVKNEIS-----YNAMLAGYVQYKKMVIAGELFEAMPCR-NISSWNTMIT 333
Query: 599 ASRIHGNVEVGERAAKSLAGLQPSHG-PSRVLLSNIYADAGRWEDAFSIRKEMRDCG 654
+G + A+ L + P S + + YA G +E+A ++ EM+ G
Sbjct: 334 GYGQNGGIA----QARKLFDMMPQRDCVSWAAIISGYAQNGHYEEALNMFVEMKRDG 386
>gi|449521645|ref|XP_004167840.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like, partial [Cucumis sativus]
Length = 735
Score = 370 bits (951), Expect = e-99, Method: Compositional matrix adjust.
Identities = 220/667 (32%), Positives = 360/667 (53%), Gaps = 75/667 (11%)
Query: 2 PLDHFHSVFNSQKA-NLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFI 60
P F F+S A NLQ + + + + LR C + + Q +QI S IF+ GLE +
Sbjct: 77 PSFFFKPPFSSSSASNLQTN--KKSCIECLRNCKS---MDQLKQIQSQIFRIGLEGDRDT 131
Query: 61 QNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCC 120
N L+ A L G +R A ++F+
Sbjct: 132 INKLMAFCADSSL------------------------GNLRY-----AEKIFNYVQDPSL 162
Query: 121 VSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGL 180
Y M+ +A+ R+ L +F+ +R G+ P+ T V+ + L + + + G
Sbjct: 163 FVYNVMVKIYAKRGILRKVLLLFQQLREDGLWPDGFTYPFVLKAIGCLRDVRQGEKVRGF 222
Query: 181 VIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELA 240
++K +D + +L++MY S+ VE A
Sbjct: 223 IVKTGMDLDNYVYNSLIDMYYELSN-------------------------------VENA 251
Query: 241 RELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDG-IAPNDVMIVDLISACGR 299
++LF+ + ++D VSW MI GY++ R +A+ +R M +G P++ +V +SAC
Sbjct: 252 KKLFDEMTTRDSVSWNVMISGYVRCRRFEDAINTFREMQQEGNEKPDEATVVSTLSACTA 311
Query: 300 AMAFGEGLQIHSIIVKA-GFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNA 358
G +IH+ + K GF I ++ YA CG +N+AR F+ ++ W +
Sbjct: 312 LKNLELGDEIHNYVRKELGFTTR--IDNALLDMYAKCGCLNIARNIFDEMSMKNVICWTS 369
Query: 359 LIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPN 418
+I+G+I G + +AR LF+ RDV W+AMI+GY Q + A+ LF M +KP+
Sbjct: 370 MISGYINCGDLREARDLFDKSPVRDVVLWTAMINGYVQFHHFDDAVALFREMQIQKIKPD 429
Query: 419 EITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFY 478
+ T+V++ A G L++G+W H Y+ N IT++ + A+I+MY+KCG ++ + E+FY
Sbjct: 430 KFTVVTLLTGCAQLGALEQGKWIHGYLDENRITMDVVVGTALIEMYSKCGCVDKSLEIFY 489
Query: 479 HIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLV 538
+ D+ T + W +IICGLAM+G + L+++S++E+ K + ITFIGVLS C H GLV
Sbjct: 490 ELEDKDT--ASWTSIICGLAMNGKTSEALRLFSEMERVGAKPDDITFIGVLSACSHGGLV 547
Query: 539 DLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMK-ADVVI--WGT 595
+ G R+F SMK V+ +EP ++HYGC++DLLGRAG L++AEE+I+ +P++ ++V+ +G
Sbjct: 548 EEGRRFFNSMKKVHRIEPKVEHYGCVIDLLGRAGLLDEAEELIQEIPIENCEIVVPLYGA 607
Query: 596 LLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGM 655
LL+A RIH NV++GER AK L ++ LL+NIYA RWEDA +R++M++ G+
Sbjct: 608 LLSACRIHNNVDMGERLAKKLENIESCDSSIHTLLANIYASVDRWEDAKKVRRKMKELGV 667
Query: 656 KRLPGFS 662
K++PG S
Sbjct: 668 KKMPGCS 674
>gi|356544545|ref|XP_003540710.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Glycine max]
Length = 705
Score = 370 bits (950), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 213/630 (33%), Positives = 344/630 (54%), Gaps = 40/630 (6%)
Query: 42 GQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIR 101
++IH+ I K+ S FIQN L++ Y KCG A+ +FD + + N ++S +
Sbjct: 38 ARRIHARIIKTQFSSEIFIQNRLVDAYGKCGYFEDARKVFDRMPQRNTFSYNAVLSVLTK 97
Query: 102 NDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASV 161
+L++A VF P S+ +M+ GFAQ+D + EAL F DM + NE + S
Sbjct: 98 FGKLDEAFNVFKSMPEPDQCSWNAMVSGFAQHDRFEEALRFFVDMHSEDFVLNEYSFGSA 157
Query: 162 ISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNI 221
+S+ C L L + + I + S LL++Y + S+LV+
Sbjct: 158 LSA---------CAGLTDLNMGIQIHALISKSRYLLDVY-MGSALVDM------------ 195
Query: 222 VSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCD 281
++K G+V A+ F+ + +++VSW ++I Y Q +AL ++ M+ +
Sbjct: 196 ---------YSKCGVVACAQRAFDGMAVRNIVSWNSLITCYEQNGPAGKALEVFVMMMDN 246
Query: 282 GIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQA-TIIHFYAACGRINL 340
G+ P+++ + ++SAC A EGLQIH+ +VK D + ++ YA C R+N
Sbjct: 247 GVEPDEITLASVVSACASWSAIREGLQIHARVVKRDKYRNDLVLGNALVDMYAKCRRVNE 306
Query: 341 ARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQP 400
ARL F+ ++ S +++ G+ R ++ AR +F+NM +++V SW+A+I+GY QN +
Sbjct: 307 ARLVFDRMPLRNVVSETSMVCGYARAASVKAARLMFSNMMEKNVVSWNALIAGYTQNGEN 366
Query: 401 NMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDN----- 455
A+ LF + + P T ++ A A+ LK GR AH +L +
Sbjct: 367 EEAVRLFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQAHTQILKHGFWFQSGEESDI 426
Query: 456 -LSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLE 514
+ ++IDMY KCG + VF + +R V WNA+I G A +G L+I+ +
Sbjct: 427 FVGNSLIDMYMKCGMVEDGCLVFERMVER--DVVSWNAMIVGYAQNGYGTNALEIFRKML 484
Query: 515 KRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQL 574
K + +T IGVLS C HAGLV+ G RYF SM++ + P H+ CMVDLLGRAG L
Sbjct: 485 VSGQKPDHVTMIGVLSACSHAGLVEEGRRYFHSMRTELGLAPMKDHFTCMVDLLGRAGCL 544
Query: 575 EDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIY 634
++A ++I++MPM+ D V+WG+LLAA ++HGN+E+G+ A+ L + P + VLLSN+Y
Sbjct: 545 DEANDLIQTMPMQPDNVVWGSLLAACKVHGNIELGKYVAEKLMEIDPLNSGPYVLLSNMY 604
Query: 635 ADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
A+ GRW+D +RK+MR G+ + PG S +
Sbjct: 605 AELGRWKDVVRVRKQMRQRGVIKQPGCSWI 634
Score = 189 bits (481), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 138/497 (27%), Positives = 234/497 (47%), Gaps = 83/497 (16%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E + SAL C+ ++ G QIH+LI KS + ++ ++L+++Y+KCG+++ A+ FD
Sbjct: 151 EYSFGSALSACAGLTDLNMGIQIHALISKSRYLLDVYMGSALVDMYSKCGVVACAQRAFD 210
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+ + V+ N +I+ Y QN +ALEV
Sbjct: 211 GMAVRNIVSWNSLITCY-------------------------------EQNGPAGKALEV 239
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGF---VIISTNLLNM 199
F M GV P+E+TLASV+S+ I E +H V+K D + +++ L++M
Sbjct: 240 FVMMMDNGVEPDEITLASVVSACASWSAIREGLQIHARVVKR--DKYRNDLVLGNALVDM 297
Query: 200 YCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMI 259
Y C + EAR +FD M RN+VS M+ G+A+A V+ AR +F + K+VVSW +I
Sbjct: 298 YAKCRRVNEARLVFDRMPLRNVVSETSMVCGYARAASVKAARLMFSNMMEKNVVSWNALI 357
Query: 260 DGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGF- 318
GY Q EA+ ++ + + I P +L++AC G Q H+ I+K GF
Sbjct: 358 AGYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQAHTQILKHGFW 417
Query: 319 -----DCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDAR 373
+ F+ ++I Y CG + L FE ++ + SWNA+I G+ +N
Sbjct: 418 FQSGEESDIFVGNSLIDMYMKCGMVEDGCLVFERMVERDVVSWNAMIVGYAQN------- 470
Query: 374 QLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSG 433
GY N ALE+F M+ +G KP+ +TM+ V A + +G
Sbjct: 471 -------------------GYGTN-----ALEIFRKMLVSGQKPDHVTMIGVLSACSHAG 506
Query: 434 TLKEG-RWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSP--- 489
++EG R+ H + + ++D+ + G ++ A ++ +T + P
Sbjct: 507 LVEEGRRYFHSMRTELGLAPMKDHFTCMVDLLGRAGCLDEANDLI-----QTMPMQPDNV 561
Query: 490 -WNAIICGLAMHGDANL 505
W +++ +HG+ L
Sbjct: 562 VWGSLLAACKVHGNIEL 578
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 127/487 (26%), Positives = 212/487 (43%), Gaps = 77/487 (15%)
Query: 158 LASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMK 217
A ++ S V + R +H +IK + I L++ Y C +AR +FD M
Sbjct: 22 FAKLLDSCVRSKSGIDARRIHARIIKTQFSSEIFIQNRLVDAYGKCGYFEDARKVFDRMP 81
Query: 218 ERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRA 277
+RN S+N +L+ K G ++ A +F+ +P D SW M+ G+ Q +R EAL +
Sbjct: 82 QRNTFSYNAVLSVLTKFGKLDEAFNVFKSMPEPDQCSWNAMVSGFAQHDRFEEALRFFVD 141
Query: 278 MLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGR 337
M + N+ +SAC G+QIH++I K+ + ++ + ++ Y+ CG
Sbjct: 142 MHSEDFVLNEYSFGSALSACAGLTDLNMGIQIHALISKSRYLLDVYMGSALVDMYSKCGV 201
Query: 338 INLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQN 397
+ A+ F+ +I SWN+L I+ Y QN
Sbjct: 202 VACAQRAFDGMAVRNIVSWNSL-------------------------------ITCYEQN 230
Query: 398 EQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLND-NL 456
ALE+F M+D GV+P+EIT+ SV A AS ++EG H V+ ND L
Sbjct: 231 GPAGKALEVFVMMMDNGVEPDEITLASVVSACASWSAIREGLQIHARVVKRDKYRNDLVL 290
Query: 457 SAAIIDMYAKCGSINTAFEVFYHIRDRTT-----------------------------SV 487
A++DMYAKC +N A VF + R +V
Sbjct: 291 GNALVDMYAKCRRVNEARLVFDRMPLRNVVSETSMVCGYARAASVKAARLMFSNMMEKNV 350
Query: 488 SPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGER---- 543
WNA+I G +G+ ++++ L++ +I TF +L+ C + + LG +
Sbjct: 351 VSWNALIAGYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQAHTQ 410
Query: 544 ------YFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLL 597
+F+S + E D+ ++D+ + G +ED V M ++ DVV W ++
Sbjct: 411 ILKHGFWFQSGE-----ESDIFVGNSLIDMYMKCGMVEDGCLVFERM-VERDVVSWNAMI 464
Query: 598 AASRIHG 604
+G
Sbjct: 465 VGYAQNG 471
>gi|449435276|ref|XP_004135421.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
gi|449493520|ref|XP_004159329.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
Length = 743
Score = 370 bits (950), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 203/641 (31%), Positives = 344/641 (53%), Gaps = 38/641 (5%)
Query: 27 VSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCST 86
+AL++C +Q +++H I ++ TF+ N+LIN Y K G + A+++FD
Sbjct: 9 TAALKFCCEARNRAQVKKLHCRIIRTLTNPETFLYNNLINTYGKLGDLKNARNVFDHIPQ 68
Query: 87 LDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDM 146
+ + N ++S Y + L D + VFD P VS+ S++ G+A N E++ V+ M
Sbjct: 69 PNLFSWNTLLSAYSKLGYLQDMQRVFDSMPNHDVVSWNSLLSGYAGNGLISESVRVYNMM 128
Query: 147 RILGVIP-NEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSS 205
G + N +T ++++ S + G + R +HG + K ++ + + L++MY
Sbjct: 129 LKDGSVNLNRITFSTMLILSSNRGFVDLGRQIHGQIFKFGYQSYLFVGSPLVDMYAKTGF 188
Query: 206 LVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQV 265
+ +A +F+E+ E+NIV +N M+ G + + A +LF+ +P KD +SW T+I G Q
Sbjct: 189 INDANRIFEEIPEKNIVVYNTMITGLLRCRFIVEAEQLFDNMPEKDSISWTTIITGLTQN 248
Query: 266 ERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQ 325
EA+ ++ M +G + +++ACG +A EG QIH+ I++ + F+
Sbjct: 249 GLFKEAVDKFKEMGIEGFCMDQFTFGSVLTACGGFLALDEGKQIHAYIIRTDYQDNIFVG 308
Query: 326 ATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVY 385
+ ++ Y C RN ++ A +F M+ ++V
Sbjct: 309 SALLDMYCKC-----------------------------RN--VKYAEAVFRKMRHKNVI 337
Query: 386 SWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYV 445
SW+AM+ GY QN A+ +F M + P++ T+ SV + A+ +L+EG H
Sbjct: 338 SWTAMLVGYGQNGYSEEAVRIFCDMQRNEIHPDDFTLGSVISSCANLASLEEGAQFHGQA 397
Query: 446 LNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYH--IRDRTTSVSPWNAIICGLAMHGDA 503
L + + +S A+I +Y KCGS+ A ++F+ IRD + W A++ G A G A
Sbjct: 398 LASGLICFVTVSNALITLYGKCGSLEHAHQLFHEMKIRDEVS----WTALVSGYAQFGKA 453
Query: 504 NLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGC 563
N T+ ++ + I + +TF+GVLS C AGLV+ G YF+ M + + P HY C
Sbjct: 454 NETISLFETMLAHGIVPDGVTFVGVLSACSRAGLVEKGYHYFECMVKEHRITPIPDHYTC 513
Query: 564 MVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSH 623
M+DLL RAG+LE+A+ I MP D + W TLL++ R++GN+E+G+ AA+SL L+P +
Sbjct: 514 MIDLLSRAGRLEEAKNFINQMPFSPDAIGWATLLSSCRLNGNLEIGKWAAESLHKLEPQN 573
Query: 624 GPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
S +LLS+IYA G+W+D +RK MR+ G+K+ PG S +
Sbjct: 574 PASYILLSSIYAAKGKWDDVAKLRKGMREMGVKKEPGHSWI 614
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/254 (21%), Positives = 93/254 (36%), Gaps = 76/254 (29%)
Query: 13 QKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCG 72
Q+ + D+ L S + C+ ++ +G Q H SGL + N+LI LY KCG
Sbjct: 363 QRNEIHPDDFTLG--SVISSCANLASLEEGAQFHGQALASGLICFVTVSNALITLYGKCG 420
Query: 73 LISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQ 132
+ A +F D V+ ++SGY + + N
Sbjct: 421 SLEHAHQLFHEMKIRDEVSWTALVSGYAQFGKAN-------------------------- 454
Query: 133 NDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVII 192
E + +F M G++P+ VT V+S+
Sbjct: 455 -----ETISLFETMLAHGIVPDGVTFVGVLSA---------------------------- 481
Query: 193 STNLLNMYCVCSSLVEARSLFDE--MKERNIVS----WNVMLNGFAKAGLVELARELFER 246
C + LVE + E +KE I + M++ ++AG +E A+ +
Sbjct: 482 --------CSRAGLVEKGYHYFECMVKEHRITPIPDHYTCMIDLLSRAGRLEEAKNFINQ 533
Query: 247 IP-SKDVVSWGTMI 259
+P S D + W T++
Sbjct: 534 MPFSPDAIGWATLL 547
>gi|356502400|ref|XP_003520007.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Glycine max]
Length = 591
Score = 369 bits (948), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 210/642 (32%), Positives = 340/642 (52%), Gaps = 70/642 (10%)
Query: 27 VSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCST 86
+S L+ C + +SQ +QI + IF GL+ + I N L+ S S+ D
Sbjct: 12 ISLLKSCKS---MSQLKQIQAHIFCFGLQQDRDILNKLMAF-------SMDSSLGD---- 57
Query: 87 LDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDM 146
N A +F+ Y MI F + R A+ +F+ +
Sbjct: 58 ------------------FNYANRIFNHIHHPSLFIYNLMIKAFVKRGSLRSAISLFQQL 99
Query: 147 RILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSL 206
R GV P+ T V+ +G + E +H V+K ++ + +L++MY
Sbjct: 100 RERGVWPDNYTYPYVLKGIGCIGEVREGEKIHAFVVKTGLEFDPYVCNSLMDMY------ 153
Query: 207 VEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVE 266
A+ GLVE ++FE +P +D VSW MI GY++ +
Sbjct: 154 -------------------------AELGLVEGFTQVFEEMPERDAVSWNIMISGYVRCK 188
Query: 267 RLSEALTMYRAMLCDG-IAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQ 325
R EA+ +YR M + PN+ +V +SAC G +IH I D +
Sbjct: 189 RFEEAVDVYRRMQMESNEKPNEATVVSTLSACAVLRNLELGKEIHDYIANE-LDLTPIMG 247
Query: 326 ATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVY 385
++ Y CG +++AR F+ I ++ W +++ G++ G ++ AR LF RDV
Sbjct: 248 NALLDMYCKCGCVSVAREIFDAMIVKNVNCWTSMVTGYVICGQLDQARYLFERSPSRDVV 307
Query: 386 SWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYV 445
W+AMI+GY Q A+ LF M GV+P++ +V++ A G L++G+W H Y+
Sbjct: 308 LWTAMINGYVQFNHFEDAIALFGEMQIRGVEPDKFIVVTLLTGCAQLGALEQGKWIHNYI 367
Query: 446 LNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANL 505
N I ++ +S A+I+MYAKCG I + E+F ++D T + W +IICGLAM+G +
Sbjct: 368 DENRIKMDAVVSTALIEMYAKCGCIEKSLEIFNGLKDMDT--TSWTSIICGLAMNGKTSE 425
Query: 506 TLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMV 565
L+++ ++ +K + ITF+ VLS C HAGLV+ G + F SM S+Y++EP+L+HYGC +
Sbjct: 426 ALELFEAMQTCGLKPDDITFVAVLSACGHAGLVEEGRKLFHSMSSIYHIEPNLEHYGCFI 485
Query: 566 DLLGRAGQLEDAEEVIRSMPMKADVVI---WGTLLAASRIHGNVEVGERAAKSLAGLQPS 622
DLLGRAG L++AEE+++ +P + + +I +G LL+A R +GN+++GER A +LA ++ S
Sbjct: 486 DLLGRAGLLQEAEELVKKLPDQNNEIIVPLYGALLSACRTYGNIDMGERLATALAKVKSS 545
Query: 623 HGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
LL++IYA A RWED +R +M+D G+K++PG+S +
Sbjct: 546 DSSLHTLLASIYASADRWEDVRKVRSKMKDLGIKKVPGYSAI 587
Score = 129 bits (323), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 151/291 (51%), Gaps = 33/291 (11%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E +VS L C+ + G++IH I + L+ + N+L+++Y KCG +S A+ +FD
Sbjct: 210 EATVVSTLSACAVLRNLELGKEIHDYI-ANELDLTPIMGNALLDMYCKCGCVSVAREIFD 268
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+ + M++GY+ +L+ AR +F+++P + V +T+MI G+ Q + + +A+ +
Sbjct: 269 AMIVKNVNCWTSMVTGYVICGQLDQARYLFERSPSRDVVLWTAMINGYVQFNHFEDAIAL 328
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
F +M+I GV P++ + ++++ LG + + + +H + + I ++ST L+ MY
Sbjct: 329 FGEMQIRGVEPDKFIVVTLLTGCAQLGALEQGKWIHNYIDENRIKMDAVVSTALIEMYAK 388
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
C + ++ +F+ +K+ + SW ++ G A G
Sbjct: 389 CGCIEKSLEIFNGLKDMDTTSWTSIICGLAMNG--------------------------- 421
Query: 263 LQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQI-HSI 312
+ SEAL ++ AM G+ P+D+ V ++SACG A EG ++ HS+
Sbjct: 422 ----KTSEALELFEAMQTCGLKPDDITFVAVLSACGHAGLVEEGRKLFHSM 468
>gi|92870988|gb|ABE80149.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 766
Score = 368 bits (945), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 223/662 (33%), Positives = 348/662 (52%), Gaps = 64/662 (9%)
Query: 8 SVFNSQKANLQNSD---YELALVSALR--YCSAHIAVSQGQQIHSLIFKSGLESNTFIQN 62
SV N+ K +++ D + A+ + +R +C + + V F + ++ N
Sbjct: 35 SVTNNNKPRVKDPDILKWNKAISTHMRNGHCDSALHV----------FNTMPRRSSVSYN 84
Query: 63 SLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVS 122
++I+ Y + + A+++FD D + N+M++GY+RN RL DAR +FD P K VS
Sbjct: 85 AMISGYLRNSKFNLARNLFDQMPERDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVS 144
Query: 123 YTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVI 182
+ S++ G+AQN EA EVF +M N ++ ++++ VH G I E L+
Sbjct: 145 WNSLLSGYAQNGYVDEAREVFDNM----PEKNSISWNGLLAAYVHNGRIEEA----CLLF 196
Query: 183 KLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARE 242
+ D +I L+ + L +AR LFD+M R+ +SWN M++G+A+ G + AR
Sbjct: 197 ESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKMPVRDAISWNTMISGYAQGGGLSQARR 256
Query: 243 LFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMA 302
LF+ P++DV +W M+ GY+Q L EA T + M N+V +I+
Sbjct: 257 LFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEM----PEKNEVSYNAMIAG------ 306
Query: 303 FGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAG 362
Y ++++AR FE +I+SWN +I G
Sbjct: 307 -----------------------------YVQTKKMDIARELFESMPCRNISSWNTMITG 337
Query: 363 FIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITM 422
+ + G I AR+ F+ M +RD SW+A+I+GYAQ+ AL +F + G N T
Sbjct: 338 YGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATF 397
Query: 423 VSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRD 482
A L+ G+ H + + A++ MY KCGSI+ A + F I +
Sbjct: 398 GCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEE 457
Query: 483 RTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGE 542
+ V WN ++ G A HG L ++ ++ +K + IT +GVLS C H GL+D G
Sbjct: 458 K--DVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGT 515
Query: 543 RYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRI 602
YF SM Y V P KHY CM+DLLGRAG+LE+A+++IR+MP + WG LL ASRI
Sbjct: 516 EYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRI 575
Query: 603 HGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
HGN E+GE+AA+ + ++P + VLLSN+YA +GRW DA +R +MRD G++++PG+S
Sbjct: 576 HGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDADKMRSKMRDIGVQKVPGYS 635
Query: 663 GV 664
V
Sbjct: 636 WV 637
>gi|347954524|gb|AEP33762.1| organelle transcript processing 82, partial [Hesperis matronalis]
Length = 672
Score = 368 bits (945), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 207/570 (36%), Positives = 314/570 (55%), Gaps = 43/570 (7%)
Query: 103 DRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVI 162
D L A VF+ P + + M G A + AL+++ M LG++PN T ++
Sbjct: 23 DGLPYAISVFETIPEPNQLIWNIMFRGHALSSDPVSALKLYVVMISLGLLPNFFTFPFLL 82
Query: 163 SSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIV 222
S E + +HG V+KL D + + T+L++MY L +A+ +FD R++V
Sbjct: 83 KSCAKSKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHRDVV 142
Query: 223 SWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDG 282
S+ ++ G+A G +E A+++F+ IP KDVVSW MI GY + +AL +++ M+
Sbjct: 143 SYTALITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKTN 202
Query: 283 IAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLAR 342
+ P++ + ++SAC ++ + G Q+HS I GF I +I Y+ CG + A
Sbjct: 203 VKPDESTMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGEVETAC 262
Query: 343 LQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNM 402
E + SWN LI G+ + ++
Sbjct: 263 ELLEGLSNKDVISWNTLIGGYTHMNLYKE------------------------------- 291
Query: 403 ALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYV---LNNSITLN-DNLSA 458
AL LF M+ +G PN++TM+S+ A A G + GRW H Y+ L + N +L
Sbjct: 292 ALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGVVVTNASSLRT 351
Query: 459 AIIDMYAKCGSINTAFEVFYHIRDRTT---SVSPWNAIICGLAMHGDANLTLKIYSDLEK 515
++IDMYAKCG I+ A +V D + S+S WNA+I G AMHG AN I+S + K
Sbjct: 352 SLIDMYAKCGDIDAAPQV----SDSSAFNRSLSTWNAMIFGFAMHGRANAAFDIFSRMRK 407
Query: 516 RNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLE 575
I+ + ITF+G+LS C H+G++DLG F+SM+ YN+ P L+HYGCM+DLLG +G +
Sbjct: 408 NGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMRQDYNITPKLEHYGCMIDLLGHSGLFK 467
Query: 576 DAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYA 635
+AEE+I +MPM+ D VIW +LL A +IHGN+E+GE AK L ++P + S VLLSNIYA
Sbjct: 468 EAEEMINTMPMEPDGVIWCSLLKACKIHGNLELGESFAKKLIKIEPENPGSYVLLSNIYA 527
Query: 636 DAGRWEDAFSIRKEMRDCGM-KRLPGFSGV 664
AG+W + IR + D GM K++PG S +
Sbjct: 528 TAGKWNEVXKIRTLLNDKGMKKKVPGCSSI 557
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 128/497 (25%), Positives = 221/497 (44%), Gaps = 73/497 (14%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
L+ C+ +GQQIH + K G + + ++ SLI++YA+ G + A+ +FD S D
Sbjct: 82 LKSCAKSKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHRDV 141
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
V+ +I+GY + A+++FD+ PIK VS+ +MI G+A+ +++ALE+F++M
Sbjct: 142 VSYTALITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKT 201
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
V P+E T+A+V+S+ G I R +H + + I L+++Y C + A
Sbjct: 202 NVKPDESTMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGEVETA 261
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLS 269
L + + ++++SWN + I GY +
Sbjct: 262 CELLEGLSNKDVISWNTL-------------------------------IGGYTHMNLYK 290
Query: 270 EALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVK--AGFDCYDF--IQ 325
EAL +++ ML G PNDV ++ ++ AC A G IH I K G + ++
Sbjct: 291 EALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGVVVTNASSLR 350
Query: 326 ATIIHFYAACGRINLA-RLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDV 384
++I YA CG I+ A ++ +++WNA+I GF +G
Sbjct: 351 TSLIDMYAKCGDIDAAPQVSDSSAFNRSLSTWNAMIFGFAMHG----------------- 393
Query: 385 YSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEY 444
+ N A ++F M G++P++IT V + A + SG L GR
Sbjct: 394 --------------RANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRNIFRS 439
Query: 445 VLNN-SITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDA 503
+ + +IT +ID+ G A E+ T + P I C L
Sbjct: 440 MRQDYNITPKLEHYGCMIDLLGHSGLFKEAEEMI-----NTMPMEPDGVIWCSLLKACKI 494
Query: 504 NLTLKIYSDLEKRNIKL 520
+ L++ K+ IK+
Sbjct: 495 HGNLELGESFAKKLIKI 511
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 130/293 (44%), Gaps = 71/293 (24%)
Query: 14 KANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGL 73
K N++ + +A V + C+ ++ G+Q+HS I G SN I N+LI+LY+KCG
Sbjct: 200 KTNVKPDESTMATV--VSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGE 257
Query: 74 ISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQN 133
+ A + + S D ++ N +I G YT M
Sbjct: 258 VETACELLEGLSNKDVISWNTLIGG------------------------YTHM------- 286
Query: 134 DCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVI-- 191
+ ++EAL +F++M G PN+VT+ S++ + HLG I R +H + I + G V+
Sbjct: 287 NLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIH-VYIDKKLKGVVVTN 345
Query: 192 ---ISTNLLNMYCVCSSLVEARSLFDEMK-ERNIVSWNVMLNGFAKAGLVELARELFERI 247
+ T+L++MY C + A + D R++ +WN M+ GFA G A ++F R
Sbjct: 346 ASSLRTSLIDMYAKCGDIDAAPQVSDSSAFNRSLSTWNAMIFGFAMHGRANAAFDIFSR- 404
Query: 248 PSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRA 300
M +GI P+D+ V L+SAC +
Sbjct: 405 ------------------------------MRKNGIEPDDITFVGLLSACSHS 427
>gi|297849104|ref|XP_002892433.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338275|gb|EFH68692.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 741
Score = 368 bits (945), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 205/564 (36%), Positives = 313/564 (55%), Gaps = 35/564 (6%)
Query: 103 DRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVI 162
D L A VF+ + + +M G A + AL+++ M LG++PN T ++
Sbjct: 82 DGLPYAISVFETIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLL 141
Query: 163 SSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIV 222
S E + +HG V+KL D + + T+L+++Y L +AR +FD R++V
Sbjct: 142 KSCAKSKAFKEGQQIHGHVLKLGYDLDLFVHTSLISVYVQNGRLEDARKVFDRSPHRDVV 201
Query: 223 SWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDG 282
S+ ++ G+A G +E A++LF+ IP KDVVSW MI GY + EAL +++ M+
Sbjct: 202 SYTALIKGYASRGYIESAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKEMMKTN 261
Query: 283 IAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLAR 342
I P++ +V ++SAC ++ + G Q+HS I GF I +++ Y+ CG + A
Sbjct: 262 IRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNSLMDLYSKCGELETAC 321
Query: 343 LQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNM 402
FE + + SWN LI G+ + ++
Sbjct: 322 GLFEGLLYKDVISWNTLIGGYTHMNLYKE------------------------------- 350
Query: 403 ALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLN--NSITLNDNLSAAI 460
AL LF M+ +G +PN++TM+S+ A A G + GRW H Y+ S T +L ++
Sbjct: 351 ALLLFQEMLRSGERPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKSATNASSLRTSL 410
Query: 461 IDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKL 520
IDMYAKCG I A +VF I + S+S WNA+I G AMHG A+ I+S + K I+
Sbjct: 411 IDMYAKCGDIEAAHQVFNSILHK--SLSSWNAMIFGFAMHGRADAAFDIFSRMRKIGIEP 468
Query: 521 NSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEV 580
+ ITF+G+LS C +G++DLG F++M Y + P L+HYGCM+DLLG +G ++AEE+
Sbjct: 469 DDITFVGLLSACSRSGMLDLGRHIFRTMTQDYKITPKLEHYGCMIDLLGHSGLFKEAEEM 528
Query: 581 IRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRW 640
I +M M+ D VIW +LL A +I GNVE+GE A++L ++P + VLLSNIYA AGRW
Sbjct: 529 INNMEMEPDGVIWCSLLKACKIRGNVELGESFAQNLIKIEPENPGCYVLLSNIYATAGRW 588
Query: 641 EDAFSIRKEMRDCGMKRLPGFSGV 664
+ IR + D GMK++PG S +
Sbjct: 589 NEVAKIRALLNDKGMKKVPGCSSI 612
Score = 178 bits (451), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 123/480 (25%), Positives = 217/480 (45%), Gaps = 68/480 (14%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
L+ C+ A +GQQIH + K G + + F+ SLI++Y + G + A+ +FD D
Sbjct: 141 LKSCAKSKAFKEGQQIHGHVLKLGYDLDLFVHTSLISVYVQNGRLEDARKVFDRSPHRDV 200
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
V+ +I GY + A+++FD+ P+K VS+ +MI G+A+ ++EALE+F++M
Sbjct: 201 VSYTALIKGYASRGYIESAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKEMMKT 260
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
+ P+E T+ +V+S+ G I R +H + + I +L+++Y C L A
Sbjct: 261 NIRPDESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNSLMDLYSKCGELETA 320
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLS 269
LF+ + ++++SWN ++ G+ L +
Sbjct: 321 CGLFEGLLYKDVISWNTLIGGYTHMNLYK------------------------------- 349
Query: 270 EALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSII---VKAGFDCYDFIQA 326
EAL +++ ML G PNDV ++ ++ AC A G IH I +K+ + ++
Sbjct: 350 EALLLFQEMLRSGERPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKSATNASS-LRT 408
Query: 327 TIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYS 386
++I YA CG I A F + ++SWNA+I GF +G + A +F+ M+K
Sbjct: 409 SLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADAAFDIFSRMRK----- 463
Query: 387 WSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVL 446
G++P++IT V + A + SG L GR +
Sbjct: 464 --------------------------IGIEPDDITFVGLLSACSRSGMLDLGRHIFRTMT 497
Query: 447 NN-SITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANL 505
+ IT +ID+ G A E+ ++ V W +++ + G+ L
Sbjct: 498 QDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINNMEMEPDGVI-WCSLLKACKIRGNVEL 556
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 126/289 (43%), Gaps = 64/289 (22%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E +V+ + C+ ++ G+Q+HS I G SN I NSL++LY+KCG + A +F+
Sbjct: 266 ESTMVTVVSACAQSGSIELGRQVHSWIDDHGFGSNLKIVNSLMDLYSKCGELETACGLFE 325
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
D ++ N +I GY + ++EAL +
Sbjct: 326 GLLYKDVISWNTLIGGY-------------------------------THMNLYKEALLL 354
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIIS--TNLLNMY 200
F++M G PN+VT+ S++ + HLG I R +H + K + S T+L++MY
Sbjct: 355 FQEMLRSGERPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKSATNASSLRTSLIDMY 414
Query: 201 CVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMID 260
C + A +F+ + +++ SWN M+ GFA G + A ++F R
Sbjct: 415 AKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADAAFDIFSR-------------- 460
Query: 261 GYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQI 309
M GI P+D+ V L+SAC R+ G I
Sbjct: 461 -----------------MRKIGIEPDDITFVGLLSACSRSGMLDLGRHI 492
>gi|347954542|gb|AEP33771.1| organelle transcript processing 82, partial [Thlaspi arvense]
Length = 673
Score = 368 bits (945), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 199/545 (36%), Positives = 310/545 (56%), Gaps = 37/545 (6%)
Query: 123 YTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVI 182
+ +M+ G+A + AL+++ M LG++PN T ++ S E + +HG V+
Sbjct: 34 WNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLLKSCAKSKAFEEGQQIHGHVL 93
Query: 183 KLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARE 242
KL + + + T+L++MY L +A +FD R++VS+ ++ G+A +G + A+E
Sbjct: 94 KLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSYTALITGYASSGNIRSAQE 153
Query: 243 LFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMA 302
+F+ IP KDVVSW MI GY + EAL +++ M+ + P++ +V ++SAC ++ +
Sbjct: 154 MFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVRPDEGTMVTVLSACAQSRS 213
Query: 303 FGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFE-LGIKDHIASWNALIA 361
G Q+HS I GF I +I Y+ CG++ A FE L KD + SWN LI
Sbjct: 214 VELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETACGLFEGLSCKD-VVSWNTLIG 272
Query: 362 GFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEIT 421
G+ + ++ AL LF M+ +G PN++T
Sbjct: 273 GYTHMNLYKE-------------------------------ALLLFQEMLRSGESPNDVT 301
Query: 422 MVSVFCAIASSGTLKEGRWAHEYVLN--NSITLNDNLSAAIIDMYAKCGSINTAFEVFYH 479
+VS+ A A G + GRW H Y+ +T +L ++IDMYAKCG I A +VF
Sbjct: 302 IVSILPACAHLGAIDIGRWIHVYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNS 361
Query: 480 IRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVD 539
+ + S+S WNA+I G AMHG AN ++S + K I+ + ITF+G+LS C H+G +D
Sbjct: 362 MLHK--SLSSWNAMIFGFAMHGRANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSGKLD 419
Query: 540 LGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAA 599
LG FKSM Y++ P L+HYGCM+DLLG +G ++A+E+I++MPM+ D VIW +LL A
Sbjct: 420 LGRHIFKSMTQDYDITPKLEHYGCMIDLLGHSGLFKEAKEMIKTMPMEPDGVIWCSLLKA 479
Query: 600 SRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLP 659
R HGN+E+ E A++L ++P + S VLLSNIYA AG W++ +R + GMK++P
Sbjct: 480 CRRHGNLELAESFARNLMKVEPENPGSYVLLSNIYATAGEWDEVAKVRALLNGKGMKKVP 539
Query: 660 GFSGV 664
G S +
Sbjct: 540 GCSSI 544
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 116/375 (30%), Positives = 193/375 (51%), Gaps = 12/375 (3%)
Query: 240 ARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGR 299
A +F I + + W TM+ GY AL +Y M+ G+ PN L+ +C +
Sbjct: 19 AISVFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLLKSCAK 78
Query: 300 AMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNAL 359
+ AF EG QIH ++K G++ ++ ++I YA GR+ A F+ + S+ AL
Sbjct: 79 SKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSYTAL 138
Query: 360 IAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNE 419
I G+ +G I A+++F+ + +DV SW+AMISGYA+ ALELF M+ V+P+E
Sbjct: 139 ITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVRPDE 198
Query: 420 ITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYH 479
TMV+V A A S +++ GR H ++ ++ N + A+ID+Y+KCG + TA +F
Sbjct: 199 GTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETACGLFEG 258
Query: 480 IRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVD 539
+ + V WN +I G L ++ ++ + N +T + +L C H G +D
Sbjct: 259 LSCK--DVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAHLGAID 316
Query: 540 LGERYF-----KSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWG 594
+G R+ K +K V N P L+ ++D+ + G +E A +V SM K+ + W
Sbjct: 317 IG-RWIHVYIDKKLKDVTNA-PSLR--TSLIDMYAKCGDIEAAHQVFNSMLHKS-LSSWN 371
Query: 595 TLLAASRIHGNVEVG 609
++ +HG G
Sbjct: 372 AMIFGFAMHGRANAG 386
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 135/493 (27%), Positives = 219/493 (44%), Gaps = 74/493 (15%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
L+ C+ A +GQQIH + K G E + ++ SLI++YA+ G + A +FD S D
Sbjct: 73 LKSCAKSKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDV 132
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
V+ +I+GY + + A+E+FD+ P+K VS+ +MI G+A+ ++EALE+F++M
Sbjct: 133 VSYTALITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKT 192
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
V P+E T+ +V+S+ + R +H + + I L+++Y C + A
Sbjct: 193 NVRPDEGTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETA 252
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLS 269
LF+ + +++VSWN + I GY +
Sbjct: 253 CGLFEGLSCKDVVSWNTL-------------------------------IGGYTHMNLYK 281
Query: 270 EALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDF--IQAT 327
EAL +++ ML G +PNDV IV ++ AC A G IH I K D + ++ +
Sbjct: 282 EALLLFQEMLRSGESPNDVTIVSILPACAHLGAIDIGRWIHVYIDKKLKDVTNAPSLRTS 341
Query: 328 IIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSW 387
+I YA CG I A F + ++SWNA+I GF +G
Sbjct: 342 LIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHG-------------------- 381
Query: 388 SAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLN 447
+ N +LF M G++P++IT V + A + SG L GR + +
Sbjct: 382 -----------RANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSGKLDLGRHIFKSMTQ 430
Query: 448 N-SITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGL----AMHGD 502
+ IT +ID+ G A E+ +T + P I C L HG+
Sbjct: 431 DYDITPKLEHYGCMIDLLGHSGLFKEAKEMI-----KTMPMEPDGVIWCSLLKACRRHGN 485
Query: 503 ANLTLKIYSDLEK 515
L +L K
Sbjct: 486 LELAESFARNLMK 498
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 95/364 (26%), Positives = 156/364 (42%), Gaps = 68/364 (18%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E +V+ L C+ +V G+Q+HS I G SN I N+LI+LY+KCG + A +F+
Sbjct: 198 EGTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETACGLFE 257
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
S D V+ N +I G YT M + ++EAL +
Sbjct: 258 GLSCKDVVSWNTLIGG------------------------YTHM-------NLYKEALLL 286
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMID--GFVIISTNLLNMY 200
F++M G PN+VT+ S++ + HLG I R +H + K + D + T+L++MY
Sbjct: 287 FQEMLRSGESPNDVTIVSILPACAHLGAIDIGRWIHVYIDKKLKDVTNAPSLRTSLIDMY 346
Query: 201 CVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMID 260
C + A +F+ M +++ SWN M+ GFA G +LF R
Sbjct: 347 AKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRANAGFDLFSR-------------- 392
Query: 261 GYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDC 320
M +GI P+D+ V L+SAC + G I + + +D
Sbjct: 393 -----------------MRKNGIEPDDITFVGLLSACSHSGKLDLGRHIFKSMTQ-DYDI 434
Query: 321 YDFIQ--ATIIHFYAACGRINLARLQFE-LGIKDHIASWNALIAGFIRNGMIEDARQLFN 377
++ +I G A+ + + ++ W +L+ R+G +E A
Sbjct: 435 TPKLEHYGCMIDLLGHSGLFKEAKEMIKTMPMEPDGVIWCSLLKACRRHGNLELAESFAR 494
Query: 378 NMQK 381
N+ K
Sbjct: 495 NLMK 498
>gi|224107977|ref|XP_002314675.1| predicted protein [Populus trichocarpa]
gi|222863715|gb|EEF00846.1| predicted protein [Populus trichocarpa]
Length = 845
Score = 368 bits (944), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 207/635 (32%), Positives = 330/635 (51%), Gaps = 64/635 (10%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
L C+ A+++G Q+H I K G E + F++NSLI+ Y +CG
Sbjct: 146 LSACTKSAALTEGFQVHGAIVKMGFERDMFVENSLIHFYGECG----------------- 188
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
++ R VFDK + VS+TS+I G+A+ C++EA+ +F +M +
Sbjct: 189 --------------EIDCMRRVFDKMSERNVVSWTSLIGGYAKRGCYKEAVSLFFEMVEV 234
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
G+ PN VT+ VIS+ C L L L C C +E
Sbjct: 235 GIRPNSVTMVGVISA---------CAKLQDL--------------QLGEQVCTCIGELEL 271
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLS 269
E N + N +++ + K G ++ AR++F+ K++V + T++ Y++
Sbjct: 272 --------EVNALMVNALVDMYMKCGAIDKARKIFDECVDKNLVLYNTIMSNYVRQGLAR 323
Query: 270 EALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATII 329
E L + ML G P+ + ++ +SAC G H +++ G + +D + II
Sbjct: 324 EVLAVLGEMLKHGPRPDRITMLSAVSACSELDDVSCGKWCHGYVLRNGLEGWDNVCNAII 383
Query: 330 HFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSA 389
+ Y CG+ +A F+ + SWN+LIAGF+RNG +E A ++F+ M D+ SW+
Sbjct: 384 NMYMKCGKQEMACRVFDRMLNKTRVSWNSLIAGFVRNGDMESAWKIFSAMPDSDLVSWNT 443
Query: 390 MISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNS 449
MI Q A+ELF M G+ +++TMV V A G L +W H Y+
Sbjct: 444 MIGALVQESMFKEAIELFRVMQSEGITADKVTMVGVASACGYLGALDLAKWIHGYIKKKD 503
Query: 450 ITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKI 509
I + +L A++DM+A+CG +A +VF + R VS W A I +AM G+ +++
Sbjct: 504 IHFDMHLGTALVDMFARCGDPQSAMQVFNKMVKR--DVSAWTAAIGAMAMEGNGTGAIEL 561
Query: 510 YSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLG 569
+ ++ ++ IK + + F+ +L+ H GLV+ G F+SMK +Y + P HYGCMVDLLG
Sbjct: 562 FDEMLQQGIKPDGVVFVALLTALSHGGLVEQGWHIFRSMKDIYGIAPQAVHYGCMVDLLG 621
Query: 570 RAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVL 629
RAG L +A +I SM M+ + VIWG+LLAA R+H NV++ AA+ ++ L P VL
Sbjct: 622 RAGLLSEALSLINSMQMEPNDVIWGSLLAACRVHKNVDIAAYAAERISELDPERTGIHVL 681
Query: 630 LSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
LSNIYA AGRW+D +R +++ G ++PG S +
Sbjct: 682 LSNIYASAGRWDDVAKVRLHLKEKGAHKMPGSSSI 716
Score = 181 bits (460), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 154/652 (23%), Positives = 275/652 (42%), Gaps = 131/652 (20%)
Query: 38 AVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMIS 97
+++ +Q+HS I K+GL + SL NL + C + +S+
Sbjct: 45 TMTELKQLHSQITKNGLNHHPL---SLTNLISSCTEMGTFESL----------------- 84
Query: 98 GYIRNDRLNDAREVF--DKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNE 155
+ A E+F D + ++S+I GF+ +A+ VFR + +G +P+
Sbjct: 85 -----EYAQKALELFIEDNGIMGTHYMFSSLIRGFSACGLGYKAIVVFRQLMCMGAVPDN 139
Query: 156 VTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDE 215
T V+S+ + E +HG ++K+ + + + +L++ Y C + R +FD+
Sbjct: 140 FTFPFVLSACTKSAALTEGFQVHGAIVKMGFERDMFVENSLIHFYGECGEIDCMRRVFDK 199
Query: 216 MKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMY 275
M ERN+VSW ++ G+AK G + EA++++
Sbjct: 200 MSERNVVSWTSLIGGYAKRGCYK-------------------------------EAVSLF 228
Query: 276 RAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAAC 335
M+ GI PN V +V +ISAC + G Q+ + I + + + ++ Y C
Sbjct: 229 FEMVEVGIRPNSVTMVGVISACAKLQDLQLGEQVCTCIGELELEVNALMVNALVDMYMKC 288
Query: 336 GRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYA 395
G I+ AR F+ + ++ +N +++ ++R G+ AR++
Sbjct: 289 GAIDKARKIFDECVDKNLVLYNTIMSNYVRQGL---AREV-------------------- 325
Query: 396 QNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDN 455
L + M+ G +P+ ITM+S A + + G+W H YVL N + DN
Sbjct: 326 --------LAVLGEMLKHGPRPDRITMLSAVSACSELDDVSCGKWCHGYVLRNGLEGWDN 377
Query: 456 LSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSD--- 512
+ AII+MY KCG A VF + ++T WN++I G +GD KI+S
Sbjct: 378 VCNAIINMYMKCGKQEMACRVFDRMLNKTR--VSWNSLIAGFVRNGDMESAWKIFSAMPD 435
Query: 513 ----------------------------LEKRNIKLNSITFIGVLSTCCHAGLVDLGERY 544
++ I + +T +GV S C + G +DL +
Sbjct: 436 SDLVSWNTMIGALVQESMFKEAIELFRVMQSEGITADKVTMVGVASACGYLGALDLAKWI 495
Query: 545 FKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHG 604
+K ++ D+ +VD+ R G + A +V M +K DV W + A + G
Sbjct: 496 HGYIKK-KDIHFDMHLGTALVDMFARCGDPQSAMQVFNKM-VKRDVSAWTAAIGAMAMEG 553
Query: 605 N----VEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRD 652
N +E+ + + G++P G V L + G E + I + M+D
Sbjct: 554 NGTGAIELFDEMLQQ--GIKPD-GVVFVALLTALSHGGLVEQGWHIFRSMKD 602
Score = 179 bits (453), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 119/415 (28%), Positives = 193/415 (46%), Gaps = 62/415 (14%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+ +V + C+ + G+Q+ + I + LE N + N+L+++Y KCG I +A+ +FD
Sbjct: 241 VTMVGVISACAKLQDLQLGEQVCTCIGELELEVNALMVNALVDMYMKCGAIDKARKIFDE 300
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
C + V N ++S Y+R G A RE L V
Sbjct: 301 CVDKNLVLYNTIMSNYVRQ--------------------------GLA-----REVLAVL 329
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
+M G P+ +T+ S +S+ L + + HG V++ ++G+ + ++NMY C
Sbjct: 330 GEMLKHGPRPDRITMLSAVSACSELDDVSCGKWCHGYVLRNGLEGWDNVCNAIINMYMKC 389
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYL 263
A +FD M + VSWN ++ GF + G +E A ++F +P D+VSW TMI +
Sbjct: 390 GKQEMACRVFDRMLNKTRVSWNSLIAGFVRNGDMESAWKIFSAMPDSDLVSWNTMIGALV 449
Query: 264 QVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDF 323
Q EA+ ++R M +GI + V +V + SACG A IH +
Sbjct: 450 QESMFKEAIELFRVMQSEGITADKVTMVGVASACGYLGALDLAKWIHG-----------Y 498
Query: 324 IQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRD 383
I+ IHF LG AL+ F R G + A Q+FN M KRD
Sbjct: 499 IKKKDIHF------------DMHLG--------TALVDMFARCGDPQSAMQVFNKMVKRD 538
Query: 384 VYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG 438
V +W+A I A A+ELF M+ G+KP+ + V++ A++ G +++G
Sbjct: 539 VSAWTAAIGAMAMEGNGTGAIELFDEMLQQGIKPDGVVFVALLTALSHGGLVEQG 593
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 103/446 (23%), Positives = 188/446 (42%), Gaps = 90/446 (20%)
Query: 203 CSSLVEARSLFDEMKER----------NIVSWNVMLNGFAKAGLVELARELFERIPSKDV 252
C ++ E + L ++ + N++S + F + A ELF I +
Sbjct: 43 CKTMTELKQLHSQITKNGLNHHPLSLTNLISSCTEMGTFESLEYAQKALELF--IEDNGI 100
Query: 253 VS----WGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQ 308
+ + ++I G+ +A+ ++R ++C G P++ ++SAC ++ A EG Q
Sbjct: 101 MGTHYMFSSLIRGFSACGLGYKAIVVFRQLMCMGAVPDNFTFPFVLSACTKSAALTEGFQ 160
Query: 309 IHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGM 368
+H IVK GF+ F++ ++IHFY CG I+ R F+ + ++ SW +LI G+ + G
Sbjct: 161 VHGAIVKMGFERDMFVENSLIHFYGECGEIDCMRRVFDKMSERNVVSWTSLIGGYAKRGC 220
Query: 369 IEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCA 428
++ A+ LF MV+ G++PN +TMV V A
Sbjct: 221 YKE-------------------------------AVSLFFEMVEVGIRPNSVTMVGVISA 249
Query: 429 IASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVS 488
A L+ G + + +N + A++DMY KCG+I+ A ++F D+ +
Sbjct: 250 CAKLQDLQLGEQVCTCIGELELEVNALMVNALVDMYMKCGAIDKARKIFDECVDKNLVL- 308
Query: 489 PWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTC-----------CHA-- 535
+N I+ G A L + ++ K + + IT + +S C CH
Sbjct: 309 -YNTIMSNYVRQGLAREVLAVLGEMLKHGPRPDRITMLSAVSACSELDDVSCGKWCHGYV 367
Query: 536 ----------------------GLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQ 573
G ++ R F M + V + ++ R G
Sbjct: 368 LRNGLEGWDNVCNAIINMYMKCGKQEMACRVFDRMLNKTRVS-----WNSLIAGFVRNGD 422
Query: 574 LEDAEEVIRSMPMKADVVIWGTLLAA 599
+E A ++ +MP +D+V W T++ A
Sbjct: 423 MESAWKIFSAMP-DSDLVSWNTMIGA 447
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 146/291 (50%), Gaps = 5/291 (1%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+ ++SA+ CS VS G+ H + ++GLE + N++IN+Y KCG A +FD
Sbjct: 342 ITMLSAVSACSELDDVSCGKWCHGYVLRNGLEGWDNVCNAIINMYMKCGKQEMACRVFDR 401
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
V+ N +I+G++RN + A ++F P VS+ +MI Q ++EA+E+F
Sbjct: 402 MLNKTRVSWNSLIAGFVRNGDMESAWKIFSAMPDSDLVSWNTMIGALVQESMFKEAIELF 461
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
R M+ G+ ++VT+ V S+ +LG + + +HG + K I + + T L++M+ C
Sbjct: 462 RVMQSEGITADKVTMVGVASACGYLGALDLAKWIHGYIKKKDIHFDMHLGTALVDMFARC 521
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFA----KAGLVELARELFERIPSKDVVSWGTMI 259
A +F++M +R++ +W + A G +EL E+ ++ D V + ++
Sbjct: 522 GDPQSAMQVFNKMVKRDVSAWTAAIGAMAMEGNGTGAIELFDEMLQQGIKPDGVVFVALL 581
Query: 260 DGYLQVERLSEALTMYRAML-CDGIAPNDVMIVDLISACGRAMAFGEGLQI 309
+ + ++R+M GIAP V ++ GRA E L +
Sbjct: 582 TALSHGGLVEQGWHIFRSMKDIYGIAPQAVHYGCMVDLLGRAGLLSEALSL 632
>gi|357521591|ref|XP_003631084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525106|gb|AET05560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 980
Score = 368 bits (944), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 223/662 (33%), Positives = 348/662 (52%), Gaps = 64/662 (9%)
Query: 8 SVFNSQKANLQNSD---YELALVSALR--YCSAHIAVSQGQQIHSLIFKSGLESNTFIQN 62
SV N+ K +++ D + A+ + +R +C + + V F + ++ N
Sbjct: 35 SVTNNNKPRVKDPDILKWNKAISTHMRNGHCDSALHV----------FNTMPRRSSVSYN 84
Query: 63 SLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVS 122
++I+ Y + + A+++FD D + N+M++GY+RN RL DAR +FD P K VS
Sbjct: 85 AMISGYLRNSKFNLARNLFDQMPERDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVS 144
Query: 123 YTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVI 182
+ S++ G+AQN EA EVF +M N ++ ++++ VH G I E L+
Sbjct: 145 WNSLLSGYAQNGYVDEAREVFDNM----PEKNSISWNGLLAAYVHNGRIEEA----CLLF 196
Query: 183 KLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARE 242
+ D +I L+ + L +AR LFD+M R+ +SWN M++G+A+ G + AR
Sbjct: 197 ESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKMPVRDAISWNTMISGYAQGGGLSQARR 256
Query: 243 LFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMA 302
LF+ P++DV +W M+ GY+Q L EA T + M N+V +I+
Sbjct: 257 LFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEM----PEKNEVSYNAMIAG------ 306
Query: 303 FGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAG 362
Y ++++AR FE +I+SWN +I G
Sbjct: 307 -----------------------------YVQTKKMDIARELFESMPCRNISSWNTMITG 337
Query: 363 FIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITM 422
+ + G I AR+ F+ M +RD SW+A+I+GYAQ+ AL +F + G N T
Sbjct: 338 YGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATF 397
Query: 423 VSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRD 482
A L+ G+ H + + A++ MY KCGSI+ A + F I +
Sbjct: 398 GCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEE 457
Query: 483 RTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGE 542
+ V WN ++ G A HG L ++ ++ +K + IT +GVLS C H GL+D G
Sbjct: 458 K--DVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGT 515
Query: 543 RYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRI 602
YF SM Y V P KHY CM+DLLGRAG+LE+A+++IR+MP + WG LL ASRI
Sbjct: 516 EYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRI 575
Query: 603 HGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
HGN E+GE+AA+ + ++P + VLLSN+YA +GRW DA +R +MRD G++++PG+S
Sbjct: 576 HGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDADKMRSKMRDIGVQKVPGYS 635
Query: 663 GV 664
V
Sbjct: 636 WV 637
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 64/129 (49%), Gaps = 38/129 (29%)
Query: 534 HAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIW 593
+ GL+D G YF M Y+V P KHY CM+DLLGR +LE+
Sbjct: 776 YTGLLDTGAEYFYPMNEEYSVTPTSKHYTCMIDLLGRVDRLEE----------------- 818
Query: 594 GTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDC 653
G LL ASRIHGN E+GE+AA+ + P + S I +MRD
Sbjct: 819 GALLGASRIHGNTELGEKAAQMFFKMGPQN-------SGI--------------SKMRDV 857
Query: 654 GMKRLPGFS 662
G++++PG+S
Sbjct: 858 GVQKVPGYS 866
>gi|357477961|ref|XP_003609266.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355510321|gb|AES91463.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 738
Score = 367 bits (942), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 219/626 (34%), Positives = 331/626 (52%), Gaps = 65/626 (10%)
Query: 43 QQIHSLIFKSGLESNTFIQNSLINLYA--KCGLISQAKSMFDSCSTLDPVACNIMISGYI 100
+QIHSLI K+GL + F+Q+ LI+ A G +S A S+F+
Sbjct: 45 KQIHSLIIKTGLNNTVFVQSKLIHFCAVSPSGDLSYALSLFEE----------------- 87
Query: 101 RNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLAS 160
++ + VF + S+I G++ + +L +F M GV PN T
Sbjct: 88 --NQQHHKHNVF---------IWNSLIRGYSLSSSPLSSLHLFSRMLYYGVQPNSHTFPF 136
Query: 161 VISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERN 220
+ S E + LH +KL + + T++++MY + AR +FD+ R+
Sbjct: 137 LFKSCTKAKATHEGKQLHAHALKLALHFNPHVHTSVIHMYASVGEMDFARLVFDKSSLRD 196
Query: 221 IVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLC 280
VS+ ++ G+ G ++ AR LF+ IP KDVVSW MI GY+Q R EA+ + M
Sbjct: 197 AVSFTALITGYVSQGCLDDARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQE 256
Query: 281 DGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINL 340
+ PN +V ++SACG + G I S + GF + +I Y CG ++
Sbjct: 257 ANVLPNKSTMVVVLSACGHTRSGELGKWIGSWVRDNGFGSNLQLTNALIDMYCKCGETDI 316
Query: 341 ARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQP 400
A R+LF+ ++++DV SW+ MI GY+
Sbjct: 317 A-------------------------------RELFDGIEEKDVISWNTMIGGYSYLSLY 345
Query: 401 NMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNN-SITLNDNLSAA 459
AL LF M+ + VKPN++T + + A A G L G+W H Y+ N + N +L +
Sbjct: 346 EEALALFEVMLRSNVKPNDVTFLGILHACACLGALDLGKWVHAYIDKNLRNSSNASLWTS 405
Query: 460 IIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNI- 518
+IDMYAKCG I A VF + R +++ WNA++ G AMHG A L ++S++ + +
Sbjct: 406 LIDMYAKCGCIEAAERVFRSMHSR--NLASWNAMLSGFAMHGHAERALALFSEMVNKGLF 463
Query: 519 KLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAE 578
+ + ITF+GVLS C AGLVDLG +YF+SM Y + P L+HYGCM+DLL RA + E+AE
Sbjct: 464 RPDDITFVGVLSACTQAGLVDLGHQYFRSMIQDYGISPKLQHYGCMIDLLARAEKFEEAE 523
Query: 579 EVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAG 638
++++M M+ D IWG+LL+A + HG VE GE A+ L L+P + + VLLSNIYA AG
Sbjct: 524 ILMKNMEMEPDGAIWGSLLSACKAHGRVEFGEYVAERLFQLEPENAGAFVLLSNIYAGAG 583
Query: 639 RWEDAFSIRKEMRDCGMKRLPGFSGV 664
RW+D IR + D GMK++PG + +
Sbjct: 584 RWDDVARIRTRLNDKGMKKVPGCTSI 609
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 110/395 (27%), Positives = 192/395 (48%), Gaps = 38/395 (9%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
+ C+ A +G+Q+H+ K L N + S+I++YA G + A+ +FD S D
Sbjct: 138 FKSCTKAKATHEGKQLHAHALKLALHFNPHVHTSVIHMYASVGEMDFARLVFDKSSLRDA 197
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
V+ +I+GY+ L+DAR +FD+ P+K VS+ +MI G+ Q+ + EA+ F +M+
Sbjct: 198 VSFTALITGYVSQGCLDDARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEA 257
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
V+PN+ T+ V+S+ H + + V + ++ L++MYC C A
Sbjct: 258 NVLPNKSTMVVVLSACGHTRSGELGKWIGSWVRDNGFGSNLQLTNALIDMYCKCGETDIA 317
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLS 269
R LFD ++E++++SWN M+ G++ L E
Sbjct: 318 RELFDGIEEKDVISWNTMIGGYSYLSLYE------------------------------- 346
Query: 270 EALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDF-IQATI 328
EAL ++ ML + PNDV + ++ AC A G +H+ I K + + + ++
Sbjct: 347 EALALFEVMLRSNVKPNDVTFLGILHACACLGALDLGKWVHAYIDKNLRNSSNASLWTSL 406
Query: 329 IHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVY--- 385
I YA CG I A F ++ASWNA+++GF +G E A LF+ M + ++
Sbjct: 407 IDMYAKCGCIEAAERVFRSMHSRNLASWNAMLSGFAMHGHAERALALFSEMVNKGLFRPD 466
Query: 386 --SWSAMISGYAQNEQPNMALELFHGMV-DAGVKP 417
++ ++S Q ++ + F M+ D G+ P
Sbjct: 467 DITFVGVLSACTQAGLVDLGHQYFRSMIQDYGISP 501
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 134/305 (43%), Gaps = 42/305 (13%)
Query: 10 FNSQKAN-LQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLY 68
+ Q+AN L N + ++SA C + G+ I S + +G SN + N+LI++Y
Sbjct: 252 YEMQEANVLPNKSTMVVVLSA---CGHTRSGELGKWIGSWVRDNGFGSNLQLTNALIDMY 308
Query: 69 AKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIM 128
KCG A+ +FD D ++ N MI GY SY S+
Sbjct: 309 CKCGETDIARELFDGIEEKDVISWNTMIGGY----------------------SYLSL-- 344
Query: 129 GFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIK-LMID 187
+ EAL +F M V PN+VT ++ + LG + + +H + K L
Sbjct: 345 -------YEEALALFEVMLRSNVKPNDVTFLGILHACACLGALDLGKWVHAYIDKNLRNS 397
Query: 188 GFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERI 247
+ T+L++MY C + A +F M RN+ SWN ML+GFA G E A LF +
Sbjct: 398 SNASLWTSLIDMYAKCGCIEAAERVFRSMHSRNLASWNAMLSGFAMHGHAERALALFSEM 457
Query: 248 PSK-----DVVSWGTMIDGYLQVERLSEALTMYRAMLCD-GIAPNDVMIVDLISACGRAM 301
+K D +++ ++ Q + +R+M+ D GI+P +I RA
Sbjct: 458 VNKGLFRPDDITFVGVLSACTQAGLVDLGHQYFRSMIQDYGISPKLQHYGCMIDLLARAE 517
Query: 302 AFGEG 306
F E
Sbjct: 518 KFEEA 522
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 81/340 (23%), Positives = 143/340 (42%), Gaps = 64/340 (18%)
Query: 291 VDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYA--ACGRINLARLQFELG 348
++L+ C F QIHS+I+K G + F+Q+ +IHF A G ++ A FE
Sbjct: 32 LNLLEKCKNINTFK---QIHSLIIKTGLNNTVFVQSKLIHFCAVSPSGDLSYALSLFEEN 88
Query: 349 IKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFH 408
+ H K +V+ W+++I GY+ + P +L LF
Sbjct: 89 QQHH----------------------------KHNVFIWNSLIRGYSLSSSPLSSLHLFS 120
Query: 409 GMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCG 468
M+ GV+PN T +F + + EG+ H + L ++ N ++ ++I MYA G
Sbjct: 121 RMLYYGVQPNSHTFPFLFKSCTKAKATHEGKQLHAHALKLALHFNPHVHTSVIHMYASVG 180
Query: 469 SINTAFEVF--YHIRDRTT---------------------------SVSPWNAIICGLAM 499
++ A VF +RD + V WNA+I G
Sbjct: 181 EMDFARLVFDKSSLRDAVSFTALITGYVSQGCLDDARRLFDEIPVKDVVSWNAMISGYVQ 240
Query: 500 HGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLK 559
G + + ++++ N+ N T + VLS C H +LG ++ S +L+
Sbjct: 241 SGRFEEAIVCFYEMQEANVLPNKSTMVVVLSACGHTRSGELG-KWIGSWVRDNGFGSNLQ 299
Query: 560 HYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAA 599
++D+ + G+ + A E+ + K DV+ W T++
Sbjct: 300 LTNALIDMYCKCGETDIARELFDGIEEK-DVISWNTMIGG 338
>gi|15235498|ref|NP_192184.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213324|sp|Q9SY02.1|PP301_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g02750
gi|4263522|gb|AAD15348.1| hypothetical protein [Arabidopsis thaliana]
gi|7269760|emb|CAB77760.1| hypothetical protein [Arabidopsis thaliana]
gi|332656824|gb|AEE82224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 781
Score = 367 bits (941), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 215/675 (31%), Positives = 348/675 (51%), Gaps = 73/675 (10%)
Query: 5 HFHSVFNSQKANLQNS--------------DYELALVSALRYCSAHIAVSQGQQIHSLIF 50
+FHS+ + + +Q S ++ +A+ S +R + A+ +F
Sbjct: 36 NFHSLKRATQTQIQKSQTKPLLKCGDSDIKEWNVAISSYMRTGRCNEALR--------VF 87
Query: 51 KSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDARE 110
K ++ N +I+ Y + G A+ +FD D V+ N+MI GY+RN L ARE
Sbjct: 88 KRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARE 147
Query: 111 VFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGG 170
+F+ P + S+ +M+ G+AQN C +A VF M N+V+ +++S+ V
Sbjct: 148 LFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRM----PEKNDVSWNALLSAYVQNSK 203
Query: 171 IWECRMLHGLVIKLMIDGFVIISTN-LLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLN 229
+ E ML + + ++S N LL + +VEAR FD M R++VSWN ++
Sbjct: 204 MEEACMLFK-----SRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIIT 258
Query: 230 GFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVM 289
G+A++G ++ AR+LF+ P +DV +W M+ GY+Q + EA ++ M N+V
Sbjct: 259 GYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKM----PERNEVS 314
Query: 290 IVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGI 349
+++ Y R+ +A+ F++
Sbjct: 315 WNAMLAG-----------------------------------YVQGERMEMAKELFDVMP 339
Query: 350 KDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHG 409
++++WN +I G+ + G I +A+ LF+ M KRD SW+AMI+GY+Q+ AL LF
Sbjct: 340 CRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQ 399
Query: 410 MVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGS 469
M G + N + S A L+ G+ H ++ + A++ MY KCGS
Sbjct: 400 MEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGS 459
Query: 470 INTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVL 529
I A ++F + + + WN +I G + HG + L+ + +++ +K + T + VL
Sbjct: 460 IEEANDLFKEMAGK--DIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVL 517
Query: 530 STCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKAD 589
S C H GLVD G +YF +M Y V P+ +HY CMVDLLGRAG LEDA ++++MP + D
Sbjct: 518 SACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPD 577
Query: 590 VVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKE 649
IWGTLL ASR+HGN E+ E AA + ++P + VLLSN+YA +GRW D +R
Sbjct: 578 AAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVR 637
Query: 650 MRDCGMKRLPGFSGV 664
MRD G+K++PG+S +
Sbjct: 638 MRDKGVKKVPGYSWI 652
>gi|449457225|ref|XP_004146349.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Cucumis sativus]
Length = 781
Score = 367 bits (941), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 213/641 (33%), Positives = 348/641 (54%), Gaps = 72/641 (11%)
Query: 27 VSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCST 86
+ LR C + + Q +QI S IF+ GLE + N L+ A L
Sbjct: 147 IECLRNCKS---MDQLKQIQSQIFRIGLEGDRDTINKLMAFCADSSL------------- 190
Query: 87 LDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDM 146
G +R A ++F+ Y M+ +A+ R+ L +F+ +
Sbjct: 191 -----------GNLRY-----AEKIFNYVQDPSLFVYNVMVKMYAKRGILRKVLLLFQQL 234
Query: 147 RILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSL 206
R G+ P+ T V+ + L + + + G ++K +D + +L++MY S+
Sbjct: 235 REDGLWPDGFTYPFVLKAIGCLRDVRQGEKVRGFIVKTGMDLDNYVYNSLIDMYYELSN- 293
Query: 207 VEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVE 266
VE A++LF+ + ++D VSW MI GY++
Sbjct: 294 ------------------------------VENAKKLFDEMTTRDSVSWNVMISGYVRCR 323
Query: 267 RLSEALTMYRAMLCDG-IAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKA-GFDCYDFI 324
R +A+ +R M +G P++ +V +SAC G +IH+ + K GF I
Sbjct: 324 RFEDAINTFREMQQEGNEKPDEATVVSTLSACTALKNLELGDEIHNYVRKELGFTTR--I 381
Query: 325 QATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDV 384
++ YA CG +N+AR F+ ++ W ++I+G+I G + +AR LF+ RDV
Sbjct: 382 DNALLDMYAKCGCLNIARNIFDEMSMKNVICWTSMISGYINCGDLREARDLFDKSPVRDV 441
Query: 385 YSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEY 444
W+AMI+GY Q + A+ LF M VKP++ T+V++ A G L++G+W H Y
Sbjct: 442 VLWTAMINGYVQFHHFDDAVALFREMQIQRVKPDKFTVVTLLTGCAQLGALEQGKWIHGY 501
Query: 445 VLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDAN 504
+ N IT++ + A+I+MY+KCG ++ + E+FY + D+ T + W +IICGLAM+G +
Sbjct: 502 LDENRITMDVVVGTALIEMYSKCGCVDKSLEIFYELEDKDT--ASWTSIICGLAMNGKTS 559
Query: 505 LTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCM 564
L+++S++E+ K + ITFIGVLS C H GLV+ G R+F SMK V+ +EP ++HYGC+
Sbjct: 560 EALRLFSEMERVGAKPDDITFIGVLSACSHGGLVEEGRRFFNSMKKVHRIEPKVEHYGCV 619
Query: 565 VDLLGRAGQLEDAEEVIRSMPMK-ADVVI--WGTLLAASRIHGNVEVGERAAKSLAGLQP 621
+DLLGRAG L++AEE+I+ +P++ ++V+ +G LL+A RIH NV++GER AK L ++
Sbjct: 620 IDLLGRAGLLDEAEELIQEIPIENCEIVVPLYGALLSACRIHNNVDMGERLAKKLENIES 679
Query: 622 SHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
LL+NIYA RWEDA +R++M++ G+K++PG S
Sbjct: 680 CDSSIHTLLANIYASVDRWEDAKKVRRKMKELGVKKMPGCS 720
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 149/284 (52%), Gaps = 32/284 (11%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E +VS L C+A + G +IH+ + K L T I N+L+++YAKCG ++ A+++FD
Sbjct: 345 EATVVSTLSACTALKNLELGDEIHNYVRKE-LGFTTRIDNALLDMYAKCGCLNIARNIFD 403
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
S + + MISGYI L +AR++FDK+P++ V +T+MI G+ Q + +A+ +
Sbjct: 404 EMSMKNVICWTSMISGYINCGDLREARDLFDKSPVRDVVLWTAMINGYVQFHHFDDAVAL 463
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
FR+M+I V P++ T+ ++++ LG + + + +HG + + I V++ T L+ MY
Sbjct: 464 FREMQIQRVKPDKFTVVTLLTGCAQLGALEQGKWIHGYLDENRITMDVVVGTALIEMYSK 523
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
C + ++ +F E+++++ SW ++ G A G
Sbjct: 524 CGCVDKSLEIFYELEDKDTASWTSIICGLAMNG--------------------------- 556
Query: 263 LQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEG 306
+ SEAL ++ M G P+D+ + ++SAC EG
Sbjct: 557 ----KTSEALRLFSEMERVGAKPDDITFIGVLSACSHGGLVEEG 596
>gi|108710611|gb|ABF98406.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 787
Score = 367 bits (941), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 208/610 (34%), Positives = 337/610 (55%), Gaps = 4/610 (0%)
Query: 56 SNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKT 115
++ F + ++ + K G I A+ +FD V+ M+ ++ + DA E++ +
Sbjct: 146 ASPFAYDFMVREHVKAGDIVSARRLFDGMPERSVVSYTTMVDALMKRGSVRDAVELYRQC 205
Query: 116 PIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECR 175
P+ +T+MI GF N+ ++AL VF +M GV PNE+TL SVI + + G
Sbjct: 206 PLCSVPFFTAMIAGFVLNELPKDALGVFHEMLSCGVSPNEITLVSVIKACIGAGEFDLAM 265
Query: 176 MLHGLVIKL-MIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKA 234
+ GL +K ++D + + +L+ +Y AR +FDEM+ R++VSW +L+ +A+
Sbjct: 266 SIVGLAMKSNLLDKNLGVRNSLITLYLRKGDADAARRMFDEMEVRDVVSWTALLDVYAEL 325
Query: 235 GLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLI 294
G +E AR + + +P ++ VSWGT++ + Q EA+++Y ML DG PN ++
Sbjct: 326 GDLEGARRVLDEMPERNEVSWGTLVARHEQKGNAKEAVSLYSQMLADGCRPNISCFSSVL 385
Query: 295 SACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIA 354
AC G +IH+ +K F+ + +I Y C ++ A++ F + +I
Sbjct: 386 GACASLQDLRSGRKIHNQTLKMACSNNVFVSSALIDMYCKCKQLPDAQMIFYSLPQKNIV 445
Query: 355 SWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAG 414
WN+LI+G+ N + +A +LF M R+V SW+++ISGYAQN Q AL+ FH M+ +G
Sbjct: 446 CWNSLISGYSNNSKMVEAEELFKKMPARNVASWNSIISGYAQNRQFIDALKSFHAMLASG 505
Query: 415 VKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAF 474
P EIT SV A AS +L+ G+ H ++ I + + A+ DMYAK G ++++
Sbjct: 506 QSPGEITFSSVLLACASLCSLEMGKMVHAKIIKLGIKESIFVGTALSDMYAKSGDLDSSK 565
Query: 475 EVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCH 534
VFY + R W A+I GLA +G A ++ ++ D+ I N TF+ +L C H
Sbjct: 566 RVFYEMPKRNDVA--WTAMIQGLAENGFAEESILLFEDMISAGITPNEQTFLAILFACSH 623
Query: 535 AGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWG 594
+GLV+ YF+ M++ + P KHY CMVD+L RAG L +AE+++ + K++ W
Sbjct: 624 SGLVEHAMHYFEMMQAC-GISPKAKHYTCMVDVLARAGHLAEAEDLLLKIESKSEANSWA 682
Query: 595 TLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCG 654
LL+A I+ N E+GERAAK L L + VLLSN+YA G+W+DA +R M+
Sbjct: 683 ALLSACNIYRNKEMGERAAKRLQELDKDNTAGYVLLSNMYASCGKWKDAAEMRILMKGIN 742
Query: 655 MKRLPGFSGV 664
+K+ G S V
Sbjct: 743 LKKDGGCSWV 752
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 128/502 (25%), Positives = 232/502 (46%), Gaps = 36/502 (7%)
Query: 20 SDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGL-ESNTFIQNSLINLYAKCGLISQAK 78
S E+ LVS ++ C I L KS L + N ++NSLI LY + G A+
Sbjct: 242 SPNEITLVSVIKACIGAGEFDLAMSIVGLAMKSNLLDKNLGVRNSLITLYLRKGDADAAR 301
Query: 79 SMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWRE 138
MFD D V+ ++ Y L AR V D+ P + VS+ +++ Q +E
Sbjct: 302 RMFDEMEVRDVVSWTALLDVYAELGDLEGARRVLDEMPERNEVSWGTLVARHEQKGNAKE 361
Query: 139 ALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLN 198
A+ ++ M G PN +SV+ + L + R +H +K+ V +S+ L++
Sbjct: 362 AVSLYSQMLADGCRPNISCFSSVLGACASLQDLRSGRKIHNQTLKMACSNNVFVSSALID 421
Query: 199 MYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTM 258
MYC C L +A+ +F + ++NIV WN +++G++ + A ELF+++P+++V SW ++
Sbjct: 422 MYCKCKQLPDAQMIFYSLPQKNIVCWNSLISGYSNNSKMVEAEELFKKMPARNVASWNSI 481
Query: 259 IDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGF 318
I GY Q + +AL + AML G +P ++ ++ AC + G +H+ I+K G
Sbjct: 482 ISGYAQNRQFIDALKSFHAMLASGQSPGEITFSSVLLACASLCSLEMGKMVHAKIIKLGI 541
Query: 319 DCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNN 378
F+ + YA G ++ ++ F K + +W A+I G NG E+
Sbjct: 542 KESIFVGTALSDMYAKSGDLDSSKRVFYEMPKRNDVAWTAMIQGLAENGFAEE------- 594
Query: 379 MQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG 438
++ LF M+ AG+ PNE T +++ A + SG ++
Sbjct: 595 ------------------------SILLFEDMISAGITPNEQTFLAILFACSHSGLVEHA 630
Query: 439 RWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLA 498
E + I+ ++D+ A+ G + A ++ I ++ + S W A++
Sbjct: 631 MHYFEMMQACGISPKAKHYTCMVDVLARAGHLAEAEDLLLKIESKSEANS-WAALLSACN 689
Query: 499 MHGDANL---TLKIYSDLEKRN 517
++ + + K +L+K N
Sbjct: 690 IYRNKEMGERAAKRLQELDKDN 711
>gi|62733531|gb|AAX95648.1| Tetratricopeptide repeat, putative [Oryza sativa Japonica Group]
Length = 888
Score = 367 bits (941), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 208/610 (34%), Positives = 337/610 (55%), Gaps = 4/610 (0%)
Query: 56 SNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKT 115
++ F + ++ + K G I A+ +FD V+ M+ ++ + DA E++ +
Sbjct: 146 ASPFAYDFMVREHVKAGDIVSARRLFDGMPERSVVSYTTMVDALMKRGSVRDAVELYRQC 205
Query: 116 PIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECR 175
P+ +T+MI GF N+ ++AL VF +M GV PNE+TL SVI + + G
Sbjct: 206 PLCSVPFFTAMIAGFVLNELPKDALGVFHEMLSCGVSPNEITLVSVIKACIGAGEFDLAM 265
Query: 176 MLHGLVIKL-MIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKA 234
+ GL +K ++D + + +L+ +Y AR +FDEM+ R++VSW +L+ +A+
Sbjct: 266 SIVGLAMKSNLLDKNLGVRNSLITLYLRKGDADAARRMFDEMEVRDVVSWTALLDVYAEL 325
Query: 235 GLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLI 294
G +E AR + + +P ++ VSWGT++ + Q EA+++Y ML DG PN ++
Sbjct: 326 GDLEGARRVLDEMPERNEVSWGTLVARHEQKGNAKEAVSLYSQMLADGCRPNISCFSSVL 385
Query: 295 SACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIA 354
AC G +IH+ +K F+ + +I Y C ++ A++ F + +I
Sbjct: 386 GACASLQDLRSGRKIHNQTLKMACSNNVFVSSALIDMYCKCKQLPDAQMIFYSLPQKNIV 445
Query: 355 SWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAG 414
WN+LI+G+ N + +A +LF M R+V SW+++ISGYAQN Q AL+ FH M+ +G
Sbjct: 446 CWNSLISGYSNNSKMVEAEELFKKMPARNVASWNSIISGYAQNRQFIDALKSFHAMLASG 505
Query: 415 VKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAF 474
P EIT SV A AS +L+ G+ H ++ I + + A+ DMYAK G ++++
Sbjct: 506 QSPGEITFSSVLLACASLCSLEMGKMVHAKIIKLGIKESIFVGTALSDMYAKSGDLDSSK 565
Query: 475 EVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCH 534
VFY + R W A+I GLA +G A ++ ++ D+ I N TF+ +L C H
Sbjct: 566 RVFYEMPKRNDVA--WTAMIQGLAENGFAEESILLFEDMISAGITPNEQTFLAILFACSH 623
Query: 535 AGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWG 594
+GLV+ YF+ M++ + P KHY CMVD+L RAG L +AE+++ + K++ W
Sbjct: 624 SGLVEHAMHYFEMMQAC-GISPKAKHYTCMVDVLARAGHLAEAEDLLLKIESKSEANSWA 682
Query: 595 TLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCG 654
LL+A I+ N E+GERAAK L L + VLLSN+YA G+W+DA +R M+
Sbjct: 683 ALLSACNIYRNKEMGERAAKRLQELDKDNTAGYVLLSNMYASCGKWKDAAEMRILMKGIN 742
Query: 655 MKRLPGFSGV 664
+K+ G S V
Sbjct: 743 LKKDGGCSWV 752
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 128/502 (25%), Positives = 232/502 (46%), Gaps = 36/502 (7%)
Query: 20 SDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGL-ESNTFIQNSLINLYAKCGLISQAK 78
S E+ LVS ++ C I L KS L + N ++NSLI LY + G A+
Sbjct: 242 SPNEITLVSVIKACIGAGEFDLAMSIVGLAMKSNLLDKNLGVRNSLITLYLRKGDADAAR 301
Query: 79 SMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWRE 138
MFD D V+ ++ Y L AR V D+ P + VS+ +++ Q +E
Sbjct: 302 RMFDEMEVRDVVSWTALLDVYAELGDLEGARRVLDEMPERNEVSWGTLVARHEQKGNAKE 361
Query: 139 ALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLN 198
A+ ++ M G PN +SV+ + L + R +H +K+ V +S+ L++
Sbjct: 362 AVSLYSQMLADGCRPNISCFSSVLGACASLQDLRSGRKIHNQTLKMACSNNVFVSSALID 421
Query: 199 MYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTM 258
MYC C L +A+ +F + ++NIV WN +++G++ + A ELF+++P+++V SW ++
Sbjct: 422 MYCKCKQLPDAQMIFYSLPQKNIVCWNSLISGYSNNSKMVEAEELFKKMPARNVASWNSI 481
Query: 259 IDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGF 318
I GY Q + +AL + AML G +P ++ ++ AC + G +H+ I+K G
Sbjct: 482 ISGYAQNRQFIDALKSFHAMLASGQSPGEITFSSVLLACASLCSLEMGKMVHAKIIKLGI 541
Query: 319 DCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNN 378
F+ + YA G ++ ++ F K + +W A+I G NG E+
Sbjct: 542 KESIFVGTALSDMYAKSGDLDSSKRVFYEMPKRNDVAWTAMIQGLAENGFAEE------- 594
Query: 379 MQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG 438
++ LF M+ AG+ PNE T +++ A + SG ++
Sbjct: 595 ------------------------SILLFEDMISAGITPNEQTFLAILFACSHSGLVEHA 630
Query: 439 RWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLA 498
E + I+ ++D+ A+ G + A ++ I ++ + S W A++
Sbjct: 631 MHYFEMMQACGISPKAKHYTCMVDVLARAGHLAEAEDLLLKIESKSEANS-WAALLSACN 689
Query: 499 MHGDANL---TLKIYSDLEKRN 517
++ + + K +L+K N
Sbjct: 690 IYRNKEMGERAAKRLQELDKDN 711
>gi|347954526|gb|AEP33763.1| organelle transcript processing 82, partial [Isatis tinctoria]
Length = 671
Score = 367 bits (941), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 205/564 (36%), Positives = 309/564 (54%), Gaps = 35/564 (6%)
Query: 103 DRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVI 162
D L A VF+ + + +MI G A + +L ++ M LG++PN T ++
Sbjct: 12 DGLPYATSVFETIQEPNQLIWNTMIRGHALSSDPVSSLTLYVCMVSLGLLPNSYTFPFLL 71
Query: 163 SSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIV 222
S E + +HG V+KL D + + T+L++MY L +A +FD R++V
Sbjct: 72 KSCAKSKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRDVV 131
Query: 223 SWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDG 282
S+ ++ G+A G + A++LF+ IP KDVVSW MI GY + EAL ++ M+
Sbjct: 132 SYTALITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKMN 191
Query: 283 IAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLAR 342
+ P++ V ++SAC + + G Q+HS + GFD I +I Y+ CG +
Sbjct: 192 VRPDESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEV---- 247
Query: 343 LQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNM 402
E A LF + +DV SW+ +I GY
Sbjct: 248 ---------------------------ETACGLFQGLSYKDVISWNTLIGGYTHMNLYKE 280
Query: 403 ALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLN--NSITLNDNLSAAI 460
AL LF M+ +G PN++TM+SV A A G + GRW H Y+ +T +L ++
Sbjct: 281 ALLLFQEMLRSGETPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSL 340
Query: 461 IDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKL 520
IDMYAKCG I A +VF + + S+S WNA+I G AMHG A+ + ++S + K I+
Sbjct: 341 IDMYAKCGDIEAAHQVFNSMLHK--SLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIEP 398
Query: 521 NSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEV 580
+ ITF+G+LS C H+G++DLG F+SM Y + P L+HYGCM+DLLG +G ++AEE+
Sbjct: 399 DDITFVGLLSACSHSGMLDLGRHIFRSMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEM 458
Query: 581 IRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRW 640
I +M M+ D VIW +LL A ++HGNVE+ E A++L ++P + S +LLSNIYA AGRW
Sbjct: 459 INTMEMEPDGVIWCSLLKACKMHGNVELAESFAQNLIKIEPENPSSYILLSNIYASAGRW 518
Query: 641 EDAFSIRKEMRDCGMKRLPGFSGV 664
ED IR + MK++PG S +
Sbjct: 519 EDVARIRALLNGKCMKKVPGCSSI 542
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 132/493 (26%), Positives = 218/493 (44%), Gaps = 74/493 (15%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
L+ C+ ++GQQIH + K G + + ++ SLI++Y + + A +FD S D
Sbjct: 71 LKSCAKSKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRDV 130
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
V+ +I+GY + A+++FD+ P+K VS+ +MI G+A+ C++EALE+F +M +
Sbjct: 131 VSYTALITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKM 190
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
V P+E T +V+S+ H G I R +H V D + I L+++Y C + A
Sbjct: 191 NVRPDESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEVETA 250
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLS 269
LF + ++++SWN ++ G+ L +
Sbjct: 251 CGLFQGLSYKDVISWNTLIGGYTHMNLYK------------------------------- 279
Query: 270 EALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVK--AGFDCYDFIQAT 327
EAL +++ ML G PNDV ++ ++ AC A G IH I K G ++ +
Sbjct: 280 EALLLFQEMLRSGETPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTS 339
Query: 328 IIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSW 387
+I YA CG I A F + ++SWNA+I GF +G + + LF+ M+K
Sbjct: 340 LIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRADASFDLFSRMRK------ 393
Query: 388 SAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLN 447
G++P++IT V + A + SG L GR +
Sbjct: 394 -------------------------IGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQ 428
Query: 448 N-SITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGL----AMHGD 502
+ +T +ID+ G A E+ T + P I C L MHG+
Sbjct: 429 DYKMTPKLEHYGCMIDLLGHSGLFKEAEEMI-----NTMEMEPDGVIWCSLLKACKMHGN 483
Query: 503 ANLTLKIYSDLEK 515
L +L K
Sbjct: 484 VELAESFAQNLIK 496
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 126/289 (43%), Gaps = 64/289 (22%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E V+ L C+ ++ G+Q+HS + G +SN I N+LI+LY+KCG + A +F
Sbjct: 196 ESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEVETACGLFQ 255
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
S D ++ N +I GY + ++EAL +
Sbjct: 256 GLSYKDVISWNTLIGGY-------------------------------THMNLYKEALLL 284
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLM--IDGFVIISTNLLNMY 200
F++M G PN+VT+ SV+ + HLG I R +H + K + + + T+L++MY
Sbjct: 285 FQEMLRSGETPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMY 344
Query: 201 CVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMID 260
C + A +F+ M +++ SWN M+ GFA G + + +LF R
Sbjct: 345 AKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRADASFDLFSR-------------- 390
Query: 261 GYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQI 309
M GI P+D+ V L+SAC + G I
Sbjct: 391 -----------------MRKIGIEPDDITFVGLLSACSHSGMLDLGRHI 422
>gi|297809863|ref|XP_002872815.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318652|gb|EFH49074.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 776
Score = 366 bits (940), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 217/677 (32%), Positives = 349/677 (51%), Gaps = 77/677 (11%)
Query: 5 HFHSVFNSQKANLQNS--------------DYELALVSALR--YCSAHIAVSQGQQIHSL 48
+FHS +S + +Q S ++ +A+ S +R CS + V
Sbjct: 31 NFHSSKSSTQTQIQKSQTKPLPKSGDSDIKEWNVAISSYMRTGRCSEALRV--------- 81
Query: 49 IFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDA 108
FK ++ N++I+ Y + G A+ +FD D V+ N+MI GY+RN L A
Sbjct: 82 -FKRMPRWSSVSYNAMISGYLRNGEFELARMLFDEMPERDLVSWNVMIKGYVRNRNLGKA 140
Query: 109 REVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHL 168
RE+F++ P + S+ +++ G+AQN C +A VF M N+V+ +++S+ V
Sbjct: 141 RELFERMPERDVCSWNTILSGYAQNGCVDDARRVFDRM----PEKNDVSWNALLSAYVQN 196
Query: 169 GGIWECRMLHGLVIKLMIDGFVIISTN-LLNMYCVCSSLVEARSLFDEMKERNIVSWNVM 227
+ E +L G + + ++S N LL + +VEAR FD MK R++VSWN +
Sbjct: 197 SKLEEACVLFG-----SRENWALVSWNCLLGGFVKKKKIVEARQFFDSMKVRDVVSWNTI 251
Query: 228 LNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPND 287
+ G+A+ G ++ AR+LF+ P DV +W M+ GY+Q + EA ++ M N+
Sbjct: 252 ITGYAQNGEIDEARQLFDESPVHDVFTWTAMVSGYIQNRMVEEARELFDRM----PERNE 307
Query: 288 VMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFEL 347
V +++ Y R+ +A+ F++
Sbjct: 308 VSWNAMLAG-----------------------------------YVQGERVEMAKELFDV 332
Query: 348 GIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELF 407
++++WN +I G+ + G I +A+ LF+ M KRD SW+AMI+GY+Q+ AL LF
Sbjct: 333 MPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSYEALRLF 392
Query: 408 HGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKC 467
M G + N + S A L+ G+ H ++ + A++ MY KC
Sbjct: 393 VLMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKC 452
Query: 468 GSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIG 527
GSI A ++F + + + WN +I G + HG L+ + +++ +K + T +
Sbjct: 453 GSIEEANDLFKEMAGK--DIVSWNTMIAGYSRHGFGEEALRFFESMKREGLKPDDATMVA 510
Query: 528 VLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMK 587
VLS C H GLVD G +YF +M Y V P+ +HY CMVDLLGRAG LE+A ++++MP +
Sbjct: 511 VLSACSHTGLVDKGRQYFHTMTQDYGVRPNSQHYACMVDLLGRAGLLEEAHNLMKNMPFE 570
Query: 588 ADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIR 647
D IWGTLL ASR+HGN E+ E AA + ++P + VLLSN+YA +GRW D +R
Sbjct: 571 PDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLR 630
Query: 648 KEMRDCGMKRLPGFSGV 664
MRD G+K++PG+S +
Sbjct: 631 VRMRDKGVKKVPGYSWI 647
>gi|218193589|gb|EEC76016.1| hypothetical protein OsI_13171 [Oryza sativa Indica Group]
Length = 950
Score = 366 bits (940), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 208/610 (34%), Positives = 337/610 (55%), Gaps = 4/610 (0%)
Query: 56 SNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKT 115
++ F + ++ + K G I A+ +FD V+ M+ ++ + DA E++ +
Sbjct: 146 ASPFAYDFMVREHVKAGDIVSARRLFDGMPERSVVSYTTMVDALMKRGSVRDAVELYRQC 205
Query: 116 PIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECR 175
P+ +T+MI GF N+ ++AL VF +M GV PNE+TL SVI + + G
Sbjct: 206 PLCSVPFFTAMIAGFVLNELPKDALGVFHEMLSCGVSPNEITLVSVIKACIGAGEFDLAM 265
Query: 176 MLHGLVIKL-MIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKA 234
+ GL +K ++D + + +L+ +Y AR +FDEM+ R++VSW +L+ +A+
Sbjct: 266 SIVGLAMKSNLLDKNLGVRNSLITLYLRKGDADAARRMFDEMEVRDVVSWTALLDVYAEL 325
Query: 235 GLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLI 294
G +E AR + + +P ++ VSWGT++ + Q EA+++Y ML DG PN ++
Sbjct: 326 GDLEGARRVLDEMPERNEVSWGTLVARHEQKGNAKEAVSLYSQMLADGCRPNISCFSSVL 385
Query: 295 SACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIA 354
AC G +IH+ +K F+ + +I Y C ++ A++ F + +I
Sbjct: 386 GACASLQDLRSGRKIHNQTLKMACSNNVFVSSALIDMYCKCKQLPDAQMIFYSLPQKNIV 445
Query: 355 SWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAG 414
WN+LI+G+ N + +A +LF M R+V SW+++ISGYAQN Q AL+ FH M+ +G
Sbjct: 446 CWNSLISGYSNNSKMVEAEELFKKMPARNVASWNSIISGYAQNRQFIDALKSFHAMLASG 505
Query: 415 VKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAF 474
P EIT SV A AS +L+ G+ H ++ I + + A+ DMYAK G ++++
Sbjct: 506 QSPGEITFSSVLLACASLCSLEMGKMVHAKIIKLGIKESIFVGTALSDMYAKSGDLDSSK 565
Query: 475 EVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCH 534
VFY + R W A+I GLA +G A ++ ++ D+ I N TF+ +L C H
Sbjct: 566 RVFYEMPKRNDVA--WTAMIQGLAENGFAEESILLFEDMISAGITPNEQTFLAILFACSH 623
Query: 535 AGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWG 594
+GLV+ YF+ M++ + P KHY CMVD+L RAG L +AE+++ + K++ W
Sbjct: 624 SGLVEHAMHYFEMMQAC-GISPKAKHYTCMVDVLARAGHLAEAEDLLLKIESKSEANSWA 682
Query: 595 TLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCG 654
LL+A I+ N E+GERAAK L L + VLLSN+YA G+W+DA +R M+
Sbjct: 683 ALLSACNIYRNKEMGERAAKRLQELDKDNTAGYVLLSNMYASCGKWKDAAEMRILMKGIN 742
Query: 655 MKRLPGFSGV 664
+K+ G S V
Sbjct: 743 LKKDGGCSWV 752
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 128/502 (25%), Positives = 232/502 (46%), Gaps = 36/502 (7%)
Query: 20 SDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGL-ESNTFIQNSLINLYAKCGLISQAK 78
S E+ LVS ++ C I L KS L + N ++NSLI LY + G A+
Sbjct: 242 SPNEITLVSVIKACIGAGEFDLAMSIVGLAMKSNLLDKNLGVRNSLITLYLRKGDADAAR 301
Query: 79 SMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWRE 138
MFD D V+ ++ Y L AR V D+ P + VS+ +++ Q +E
Sbjct: 302 RMFDEMEVRDVVSWTALLDVYAELGDLEGARRVLDEMPERNEVSWGTLVARHEQKGNAKE 361
Query: 139 ALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLN 198
A+ ++ M G PN +SV+ + L + R +H +K+ V +S+ L++
Sbjct: 362 AVSLYSQMLADGCRPNISCFSSVLGACASLQDLRSGRKIHNQTLKMACSNNVFVSSALID 421
Query: 199 MYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTM 258
MYC C L +A+ +F + ++NIV WN +++G++ + A ELF+++P+++V SW ++
Sbjct: 422 MYCKCKQLPDAQMIFYSLPQKNIVCWNSLISGYSNNSKMVEAEELFKKMPARNVASWNSI 481
Query: 259 IDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGF 318
I GY Q + +AL + AML G +P ++ ++ AC + G +H+ I+K G
Sbjct: 482 ISGYAQNRQFIDALKSFHAMLASGQSPGEITFSSVLLACASLCSLEMGKMVHAKIIKLGI 541
Query: 319 DCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNN 378
F+ + YA G ++ ++ F K + +W A+I G NG E+
Sbjct: 542 KESIFVGTALSDMYAKSGDLDSSKRVFYEMPKRNDVAWTAMIQGLAENGFAEE------- 594
Query: 379 MQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG 438
++ LF M+ AG+ PNE T +++ A + SG ++
Sbjct: 595 ------------------------SILLFEDMISAGITPNEQTFLAILFACSHSGLVEHA 630
Query: 439 RWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLA 498
E + I+ ++D+ A+ G + A ++ I ++ + S W A++
Sbjct: 631 MHYFEMMQACGISPKAKHYTCMVDVLARAGHLAEAEDLLLKIESKSEANS-WAALLSACN 689
Query: 499 MHGDANL---TLKIYSDLEKRN 517
++ + + K +L+K N
Sbjct: 690 IYRNKEMGERAAKRLQELDKDN 711
>gi|222625627|gb|EEE59759.1| hypothetical protein OsJ_12247 [Oryza sativa Japonica Group]
Length = 950
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 208/610 (34%), Positives = 337/610 (55%), Gaps = 4/610 (0%)
Query: 56 SNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKT 115
++ F + ++ + K G I A+ +FD V+ M+ ++ + DA E++ +
Sbjct: 146 ASPFAYDFMVREHVKAGDIVSARRLFDGMPERSVVSYTTMVDALMKRGSVRDAVELYRQC 205
Query: 116 PIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECR 175
P+ +T+MI GF N+ ++AL VF +M GV PNE+TL SVI + + G
Sbjct: 206 PLCSVPFFTAMIAGFVLNELPKDALGVFHEMLSCGVSPNEITLVSVIKACIGAGEFDLAM 265
Query: 176 MLHGLVIKL-MIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKA 234
+ GL +K ++D + + +L+ +Y AR +FDEM+ R++VSW +L+ +A+
Sbjct: 266 SIVGLAMKSNLLDKNLGVRNSLITLYLRKGDADAARRMFDEMEVRDVVSWTALLDVYAEL 325
Query: 235 GLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLI 294
G +E AR + + +P ++ VSWGT++ + Q EA+++Y ML DG PN ++
Sbjct: 326 GDLEGARRVLDEMPERNEVSWGTLVARHEQKGNAKEAVSLYSQMLADGCRPNISCFSSVL 385
Query: 295 SACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIA 354
AC G +IH+ +K F+ + +I Y C ++ A++ F + +I
Sbjct: 386 GACASLQDLRSGRKIHNQTLKMACSNNVFVSSALIDMYCKCKQLPDAQMIFYSLPQKNIV 445
Query: 355 SWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAG 414
WN+LI+G+ N + +A +LF M R+V SW+++ISGYAQN Q AL+ FH M+ +G
Sbjct: 446 CWNSLISGYSNNSKMVEAEELFKKMPARNVASWNSIISGYAQNRQFIDALKSFHAMLASG 505
Query: 415 VKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAF 474
P EIT SV A AS +L+ G+ H ++ I + + A+ DMYAK G ++++
Sbjct: 506 QSPGEITFSSVLLACASLCSLEMGKMVHAKIIKLGIKESIFVGTALSDMYAKSGDLDSSK 565
Query: 475 EVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCH 534
VFY + R W A+I GLA +G A ++ ++ D+ I N TF+ +L C H
Sbjct: 566 RVFYEMPKRNDVA--WTAMIQGLAENGFAEESILLFEDMISAGITPNEQTFLAILFACSH 623
Query: 535 AGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWG 594
+GLV+ YF+ M++ + P KHY CMVD+L RAG L +AE+++ + K++ W
Sbjct: 624 SGLVEHAMHYFEMMQAC-GISPKAKHYTCMVDVLARAGHLAEAEDLLLKIESKSEANSWA 682
Query: 595 TLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCG 654
LL+A I+ N E+GERAAK L L + VLLSN+YA G+W+DA +R M+
Sbjct: 683 ALLSACNIYRNKEMGERAAKRLQELDKDNTAGYVLLSNMYASCGKWKDAAEMRILMKGIN 742
Query: 655 MKRLPGFSGV 664
+K+ G S V
Sbjct: 743 LKKDGGCSWV 752
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 128/502 (25%), Positives = 232/502 (46%), Gaps = 36/502 (7%)
Query: 20 SDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGL-ESNTFIQNSLINLYAKCGLISQAK 78
S E+ LVS ++ C I L KS L + N ++NSLI LY + G A+
Sbjct: 242 SPNEITLVSVIKACIGAGEFDLAMSIVGLAMKSNLLDKNLGVRNSLITLYLRKGDADAAR 301
Query: 79 SMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWRE 138
MFD D V+ ++ Y L AR V D+ P + VS+ +++ Q +E
Sbjct: 302 RMFDEMEVRDVVSWTALLDVYAELGDLEGARRVLDEMPERNEVSWGTLVARHEQKGNAKE 361
Query: 139 ALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLN 198
A+ ++ M G PN +SV+ + L + R +H +K+ V +S+ L++
Sbjct: 362 AVSLYSQMLADGCRPNISCFSSVLGACASLQDLRSGRKIHNQTLKMACSNNVFVSSALID 421
Query: 199 MYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTM 258
MYC C L +A+ +F + ++NIV WN +++G++ + A ELF+++P+++V SW ++
Sbjct: 422 MYCKCKQLPDAQMIFYSLPQKNIVCWNSLISGYSNNSKMVEAEELFKKMPARNVASWNSI 481
Query: 259 IDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGF 318
I GY Q + +AL + AML G +P ++ ++ AC + G +H+ I+K G
Sbjct: 482 ISGYAQNRQFIDALKSFHAMLASGQSPGEITFSSVLLACASLCSLEMGKMVHAKIIKLGI 541
Query: 319 DCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNN 378
F+ + YA G ++ ++ F K + +W A+I G NG E+
Sbjct: 542 KESIFVGTALSDMYAKSGDLDSSKRVFYEMPKRNDVAWTAMIQGLAENGFAEE------- 594
Query: 379 MQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG 438
++ LF M+ AG+ PNE T +++ A + SG ++
Sbjct: 595 ------------------------SILLFEDMISAGITPNEQTFLAILFACSHSGLVEHA 630
Query: 439 RWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLA 498
E + I+ ++D+ A+ G + A ++ I ++ + S W A++
Sbjct: 631 MHYFEMMQACGISPKAKHYTCMVDVLARAGHLAEAEDLLLKIESKSEANS-WAALLSACN 689
Query: 499 MHGDANL---TLKIYSDLEKRN 517
++ + + K +L+K N
Sbjct: 690 IYRNKEMGERAAKRLQELDKDN 711
>gi|224118338|ref|XP_002317794.1| predicted protein [Populus trichocarpa]
gi|222858467|gb|EEE96014.1| predicted protein [Populus trichocarpa]
Length = 852
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 202/647 (31%), Positives = 360/647 (55%), Gaps = 17/647 (2%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
+ CS +V G+Q+H L+ K N ++ N+LI++Y KCG + AK + D
Sbjct: 167 FKACSGLGSVELGRQLHGLVIKFRFCLNIYVSNALIDMYGKCGSLDDAKKVLVKMPERDS 226
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTP-----IKCCVSYTSMIMGFAQNDCWREALEVFR 144
V N +I+ N + +A E +K + VS++++I GFAQN EA+E+
Sbjct: 227 VTWNSVITACAANGMVYEALEFLEKMKSLDYSMPNVVSWSAVIGGFAQNGYDEEAIEMLF 286
Query: 145 DMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCS 204
M++ G++PN TLA V+ + L + + LHG + + ++ L+++Y C
Sbjct: 287 RMQVEGLVPNAQTLAGVLPACARLQRLDLGKQLHGYITRHDFISNPVVVNALVDVYRRCG 346
Query: 205 SLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIP----SKDVVSWGTMID 260
+ A +F + +N++S N M+ G+ ++G V A+ELF+ + + ++SW ++I
Sbjct: 347 DMGGAAKIFLKFSVKNVLSCNTMIVGYCESGDVSKAKELFDCMDVLGIERGLISWNSIIS 406
Query: 261 GYLQVERLSEALTMYRAMLCD-GIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFD 319
GY++ EA +M++ ML + GI P+ + +++AC ++ +G +IH+ + G
Sbjct: 407 GYVRNFMFDEAFSMFQNMLMEEGIEPDSFTLGSVLTACADTISLRQGKEIHAQAIVKGLQ 466
Query: 320 CYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNM 379
F+ ++ Y+ C + A++ F+ ++ + +WNALI+G+ R+ IE + L M
Sbjct: 467 SDTFVGGALVEMYSKCQDLTAAQVAFDEVMEKDVPTWNALISGYTRSNQIERIQYLLEKM 526
Query: 380 Q----KRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTL 435
+ ++Y+W+++++G +N Q ++ ++LF M + ++P+ T+ + A + TL
Sbjct: 527 KGDGYHPNIYTWNSILAGLVENRQLDLTMQLFSEMQISKLRPDIYTVGIILPACSRLATL 586
Query: 436 KEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIIC 495
+ G+ AH + + + ++ AA++DMYAKCGS+ A + I + ++ NA++
Sbjct: 587 ERGKQAHAHSIKCGYDTDVHIGAALVDMYAKCGSLKYAQLAYDRISN--PNLVSHNAMLT 644
Query: 496 GLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVE 555
AMHG + ++ + + +TF+ VLS+C H G V+ G +F M YNV+
Sbjct: 645 ACAMHGHGEEGISLFQTMLALGFIPDHVTFLSVLSSCVHVGSVETGCEFFDLM-GYYNVK 703
Query: 556 PDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKS 615
P LKHY MVDLL R+GQL +A E+I+ MP++ D V+WG LL HGN+E+GE AA+
Sbjct: 704 PTLKHYTSMVDLLSRSGQLHEAYELIKKMPVECDSVLWGALLGGCVTHGNIELGEIAAER 763
Query: 616 LAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
L L+P++ + VLL+N++A A RW D +R M+D GM + PG S
Sbjct: 764 LIELEPNNSGNYVLLANLHAYARRWTDLARVRGMMKDRGMHKSPGCS 810
Score = 212 bits (540), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 152/629 (24%), Positives = 292/629 (46%), Gaps = 82/629 (13%)
Query: 42 GQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIR 101
G+Q+H+ K+G +++ FI L+ +YA+CGL
Sbjct: 78 GKQVHAHTIKTGFDADGFIDTKLLQMYARCGL---------------------------- 109
Query: 102 NDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASV 161
L DA +F+ P++ S+ +++ + + + EA +F+ ++ GV + V
Sbjct: 110 ---LKDADFLFETMPMRNLHSWKAILSVYLDHGLFEEAFLLFQVLQFDGVELDFFVFPLV 166
Query: 162 ISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNI 221
+ LG + R LHGLVIK + +S L++MY C SL +A+ + +M ER+
Sbjct: 167 FKACSGLGSVELGRQLHGLVIKFRFCLNIYVSNALIDMYGKCGSLDDAKKVLVKMPERDS 226
Query: 222 VSWNVMLNGFAKAGLVELARELFERIPSKD-----VVSWGTMIDGYLQVERLSEALTMYR 276
V+WN ++ A G+V A E E++ S D VVSW +I G+ Q EA+ M
Sbjct: 227 VTWNSVITACAANGMVYEALEFLEKMKSLDYSMPNVVSWSAVIGGFAQNGYDEEAIEMLF 286
Query: 277 AMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACG 336
M +G+ PN + ++ AC R G Q+H I + F + ++ Y CG
Sbjct: 287 RMQVEGLVPNAQTLAGVLPACARLQRLDLGKQLHGYITRHDFISNPVVVNALVDVYRRCG 346
Query: 337 RI-NLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ----KRDVYSWSAMI 391
+ A++ + +K+ + S N +I G+ +G + A++LF+ M +R + SW+++I
Sbjct: 347 DMGGAAKIFLKFSVKN-VLSCNTMIVGYCESGDVSKAKELFDCMDVLGIERGLISWNSII 405
Query: 392 SGYAQNEQPNMALELFHGMV-DAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSI 450
SGY +N + A +F M+ + G++P+ T+ SV A A + +L++G+ H + +
Sbjct: 406 SGYVRNFMFDEAFSMFQNMLMEEGIEPDSFTLGSVLTACADTISLRQGKEIHAQAIVKGL 465
Query: 451 TLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTT------------------------- 485
+ + A+++MY+KC + A F + ++
Sbjct: 466 QSDTFVGGALVEMYSKCQDLTAAQVAFDEVMEKDVPTWNALISGYTRSNQIERIQYLLEK 525
Query: 486 --------SVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGL 537
++ WN+I+ GL + +LT++++S+++ ++ + T +L C
Sbjct: 526 MKGDGYHPNIYTWNSILAGLVENRQLDLTMQLFSEMQISKLRPDIYTVGIILPACSRLAT 585
Query: 538 VDLGER-YFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTL 596
++ G++ + S+K Y+ D+ +VD+ + G L+ A+ + ++V +
Sbjct: 586 LERGKQAHAHSIKCGYDT--DVHIGAALVDMYAKCGSLKYAQLAYDRIS-NPNLVSHNAM 642
Query: 597 LAASRIHGNVEVGERAAKSL--AGLQPSH 623
L A +HG+ E G +++ G P H
Sbjct: 643 LTACAMHGHGEEGISLFQTMLALGFIPDH 671
Score = 172 bits (436), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 111/490 (22%), Positives = 231/490 (47%), Gaps = 41/490 (8%)
Query: 25 ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSC 84
L L C+ + G+Q+H I + SN + N+L+++Y +CG + A +F
Sbjct: 299 TLAGVLPACARLQRLDLGKQLHGYITRHDFISNPVVVNALVDVYRRCGDMGGAAKIFLKF 358
Query: 85 STLDPVACNIMISGYIRNDRLNDAREVFDKTPI----KCCVSYTSMIMGFAQNDCWREAL 140
S + ++CN MI GY + ++ A+E+FD + + +S+ S+I G+ +N + EA
Sbjct: 359 SVKNVLSCNTMIVGYCESGDVSKAKELFDCMDVLGIERGLISWNSIISGYVRNFMFDEAF 418
Query: 141 EVFRDMRI-LGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNM 199
+F++M + G+ P+ TL SV+++ + + + +H I + + L+ M
Sbjct: 419 SMFQNMLMEEGIEPDSFTLGSVLTACADTISLRQGKEIHAQAIVKGLQSDTFVGGALVEM 478
Query: 200 YCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPS----KDVVSW 255
Y C L A+ FDE+ E+++ +WN +++G+ ++ +E + L E++ ++ +W
Sbjct: 479 YSKCQDLTAAQVAFDEVMEKDVPTWNALISGYTRSNQIERIQYLLEKMKGDGYHPNIYTW 538
Query: 256 GTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVK 315
+++ G ++ +L + ++ M + P+ + ++ AC R G Q H+ +K
Sbjct: 539 NSILAGLVENRQLDLTMQLFSEMQISKLRPDIYTVGIILPACSRLATLERGKQAHAHSIK 598
Query: 316 AGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQL 375
G+D I A ++ YA CG + A+L + D I++ N
Sbjct: 599 CGYDTDVHIGAALVDMYAKCGSLKYAQLAY-----DRISNPN------------------ 635
Query: 376 FNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTL 435
+ S +AM++ A + + LF M+ G P+ +T +SV + G++
Sbjct: 636 --------LVSHNAMLTACAMHGHGEEGISLFQTMLALGFIPDHVTFLSVLSSCVHVGSV 687
Query: 436 KEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIIC 495
+ G + + ++ +++D+ ++ G ++ A+E+ + SV W A++
Sbjct: 688 ETGCEFFDLMGYYNVKPTLKHYTSMVDLLSRSGQLHEAYELIKKMPVECDSVL-WGALLG 746
Query: 496 GLAMHGDANL 505
G HG+ L
Sbjct: 747 GCVTHGNIEL 756
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/363 (23%), Positives = 162/363 (44%), Gaps = 58/363 (15%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
L S L C+ I++ QG++IH+ GL+S+TF+ +L+ +Y+KC ++ A+ FD
Sbjct: 435 FTLGSVLTACADTISLRQGKEIHAQAIVKGLQSDTFVGGALVEMYSKCQDLTAAQVAFDE 494
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTP----IKCCVSYTSMIMGFAQNDCWREA 139
D N +ISGY R++++ + + +K ++ S++ G +N
Sbjct: 495 VMEKDVPTWNALISGYTRSNQIERIQYLLEKMKGDGYHPNIYTWNSILAGLVENRQLDLT 554
Query: 140 LEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNM 199
+++F +M+I + P+ T+ ++ + L + + H IK D V I L++M
Sbjct: 555 MQLFSEMQISKLRPDIYTVGIILPACSRLATLERGKQAHAHSIKCGYDTDVHIGAALVDM 614
Query: 200 YCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMI 259
Y C SL A+ +D + N+VS N ML A G E
Sbjct: 615 YAKCGSLKYAQLAYDRISNPNLVSHNAMLTACAMHGHGE--------------------- 653
Query: 260 DGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFD 319
E +++++ ML G P+ V + ++S+C +H V+ G +
Sbjct: 654 ----------EGISLFQTMLALGFIPDHVTFLSVLSSC-----------VHVGSVETGCE 692
Query: 320 CYDF-----IQATIIHF------YAACGRINLA-RLQFELGIKDHIASWNALIAGFIRNG 367
+D ++ T+ H+ + G+++ A L ++ ++ W AL+ G + +G
Sbjct: 693 FFDLMGYYNVKPTLKHYTSMVDLLSRSGQLHEAYELIKKMPVECDSVLWGALLGGCVTHG 752
Query: 368 MIE 370
IE
Sbjct: 753 NIE 755
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 79/171 (46%), Gaps = 4/171 (2%)
Query: 436 KEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIIC 495
K G+ H + + + + ++ MYA+CG + A +F + R ++ W AI+
Sbjct: 76 KLGKQVHAHTIKTGFDADGFIDTKLLQMYARCGLLKDADFLFETMPMR--NLHSWKAILS 133
Query: 496 GLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVE 555
HG ++ L+ ++L+ F V C G V+LG R + +
Sbjct: 134 VYLDHGLFEEAFLLFQVLQFDGVELDFFVFPLVFKACSGLGSVELG-RQLHGLVIKFRFC 192
Query: 556 PDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNV 606
++ ++D+ G+ G L+DA++V+ MP + D V W +++ A +G V
Sbjct: 193 LNIYVSNALIDMYGKCGSLDDAKKVLVKMPER-DSVTWNSVITACAANGMV 242
>gi|347954538|gb|AEP33769.1| organelle transcript processing 82, partial [Olimarabidopsis
pumila]
Length = 710
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 206/565 (36%), Positives = 312/565 (55%), Gaps = 37/565 (6%)
Query: 103 DRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVI 162
D L A VFD + + +M G A + AL+++ M LG++PN T ++
Sbjct: 51 DGLPYAISVFDTIQEPXLLIWNTMFRGHALSSDPVSALKLYVCMVSLGLLPNSYTFPFLL 110
Query: 163 SSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIV 222
S E + LHG V+K D + I T+L++MY L +A+ + D+ R++V
Sbjct: 111 KSCAKSXAFKEGQQLHGQVLKFGFDLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHRDVV 170
Query: 223 SWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDG 282
S+ ++ G+A G +E A ++F+ IP KDVVSW I GY + EAL +++ M+
Sbjct: 171 SYTALITGYASRGXIESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMKTN 230
Query: 283 IAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLAR 342
+ P++ +V ++SAC ++ + G Q+HS I GF I +I Y+ CG + A
Sbjct: 231 VRPDESTMVTVLSACAQSGSIELGRQVHSWINDHGFGXNLKIVNALIDLYSKCGELETAC 290
Query: 343 LQFE-LGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPN 401
F+ L KD + SWN LI G+ + ++
Sbjct: 291 GLFQGLSNKD-VISWNTLIGGYTHMNLYKE------------------------------ 319
Query: 402 MALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLN--NSITLNDNLSAA 459
AL LF M+ +G KPN++TM+S+ A A G + GRW H Y+ +T +L +
Sbjct: 320 -ALLLFQDMLRSGEKPNDVTMLSILSACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTS 378
Query: 460 IIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIK 519
+IDMYAKCG I A +VF + +R S+S WNA+I G AMHG AN I+S + K I+
Sbjct: 379 LIDMYAKCGDIEAAQQVFDSMLNR--SLSSWNAMIFGFAMHGRANAAFDIFSRMRKNGIE 436
Query: 520 LNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEE 579
+ ITF+G+LS C H+G++DLG F+SM Y + P L+HYGCM+DL G +G ++AE+
Sbjct: 437 PDDITFVGLLSACSHSGMLDLGRHIFRSMTRDYKLMPKLEHYGCMIDLXGHSGLFKEAEK 496
Query: 580 VIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGR 639
+I +M M+ D VIW +LL A ++HGNVE+GE A++L ++P + S VLLSNIYA A R
Sbjct: 497 MINTMEMEPDGVIWCSLLKACKMHGNVELGESYAQNLIKIEPENPGSYVLLSNIYATAER 556
Query: 640 WEDAFSIRKEMRDCGMKRLPGFSGV 664
W + R + D GMK++PG S +
Sbjct: 557 WNEVAKTRALLNDKGMKKVPGCSSI 581
Score = 179 bits (455), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 128/484 (26%), Positives = 212/484 (43%), Gaps = 76/484 (15%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
L+ C+ A +GQQ+H + K G + + +I SLI++Y + G + A+ + D S D
Sbjct: 110 LKSCAKSXAFKEGQQLHGQVLKFGFDLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHRDV 169
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
V+ +I+GY + A ++FD+ P+K VS+ + I G+A+ ++EALE+F+ M
Sbjct: 170 VSYTALITGYASRGXIESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMKT 229
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
V P+E T+ +V+S+ G I R +H + + I L+++Y C L A
Sbjct: 230 NVRPDESTMVTVLSACAQSGSIELGRQVHSWINDHGFGXNLKIVNALIDLYSKCGELETA 289
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLS 269
LF + ++++SWN ++ G+ L +
Sbjct: 290 CGLFQGLSNKDVISWNTLIGGYTHMNLYK------------------------------- 318
Query: 270 EALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVK--AGFDCYDFIQAT 327
EAL +++ ML G PNDV ++ ++SAC A G IH I K G ++ +
Sbjct: 319 EALLLFQDMLRSGEKPNDVTMLSILSACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTS 378
Query: 328 IIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSW 387
+I YA CG I A+ F+ + ++SWNA+I GF +G
Sbjct: 379 LIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHG-------------------- 418
Query: 388 SAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLN 447
+ N A ++F M G++P++IT V + A + SG L GR +
Sbjct: 419 -----------RANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFR-SMT 466
Query: 448 NSITLNDNLS--AAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGL----AMHG 501
L L +ID+ G A ++ T + P I C L MHG
Sbjct: 467 RDYKLMPKLEHYGCMIDLXGHSGLFKEAEKMI-----NTMEMEPDGVIWCSLLKACKMHG 521
Query: 502 DANL 505
+ L
Sbjct: 522 NVEL 525
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 129/289 (44%), Gaps = 64/289 (22%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E +V+ L C+ ++ G+Q+HS I G N I N+LI+LY+KCG + A +F
Sbjct: 235 ESTMVTVLSACAQSGSIELGRQVHSWINDHGFGXNLKIVNALIDLYSKCGELETACGLFQ 294
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
S D ++ N +I G YT M + ++EAL +
Sbjct: 295 GLSNKDVISWNTLIGG------------------------YTHM-------NLYKEALLL 323
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLM--IDGFVIISTNLLNMY 200
F+DM G PN+VT+ S++S+ HLG I R +H + K + + + T+L++MY
Sbjct: 324 FQDMLRSGEKPNDVTMLSILSACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMY 383
Query: 201 CVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMID 260
C + A+ +FD M R++ SWN M+ GFA G A ++F R
Sbjct: 384 AKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANAAFDIFSR-------------- 429
Query: 261 GYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQI 309
M +GI P+D+ V L+SAC + G I
Sbjct: 430 -----------------MRKNGIEPDDITFVGLLSACSHSGMLDLGRHI 461
>gi|449476227|ref|XP_004154678.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g22410, mitochondrial-like [Cucumis sativus]
Length = 681
Score = 366 bits (939), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 211/644 (32%), Positives = 331/644 (51%), Gaps = 74/644 (11%)
Query: 26 LVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGL-----ISQAKSM 80
L+S L C++ +++ ++IH+ + +GL S+ F +L L A C + + +
Sbjct: 57 LLSLLEACTS---MAKMKEIHAQMISTGLISDGF---ALSRLVAFCAISEWRNLDYCDKI 110
Query: 81 FDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREAL 140
++ + L+ + N+ I GY+ ++ PI + Y +M
Sbjct: 111 LNNAANLNXFSWNMAIRGYVESE-----------NPINAVLLYRNM-------------- 145
Query: 141 EVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMY 200
+R IP+ T + W + G VI+L D + + ++++
Sbjct: 146 -----LRKGSAIPDNYTYPLLFKVCAGFSLSWTANEILGHVIQLGFDSDLFVHNAIIHVL 200
Query: 201 CVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMID 260
C L+ AR +LF+ +D+VSW ++I+
Sbjct: 201 VSCGELLAAR-------------------------------KLFDESCVRDLVSWNSIIN 229
Query: 261 GYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDC 320
GY++ EA +Y M + P++V ++ ++SA + G ++H I + G +
Sbjct: 230 GYVRCGLADEAFDLYYKMGELNVMPDEVTMIGVVSASAQLENLALGRKLHQSIEEMGLNL 289
Query: 321 YDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ 380
+ ++ Y C I A++ FE K + SW ++ G+ + G++E A +LFN M
Sbjct: 290 TVPLANALMDMYIKCKNIEAAKILFENMTKKTVVSWTTMVIGYAKFGLLESAVRLFNEMP 349
Query: 381 KRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRW 440
++DV W+A+I G+ Q ++ AL LFH M + V P++IT+V+ A + G L G W
Sbjct: 350 EKDVVLWNALIGGFVQAKRSKEALALFHEMQASSVAPDKITVVNCLSACSQLGALDVGIW 409
Query: 441 AHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMH 500
H YV +++T+N L A++DMYAKCG+I A +VF + R + W AIICGLA+H
Sbjct: 410 MHHYVDKHNLTMNVALGTALVDMYAKCGNIKKAIQVFEEMPGRNSLT--WTAIICGLALH 467
Query: 501 GDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKH 560
G + + +S++ + + ITFIGVLS CCH GLVD G YF M S Y + P LKH
Sbjct: 468 GQPHAAISYFSEMISIGLVPDEITFIGVLSACCHGGLVDQGRDYFYQMTSKYGISPKLKH 527
Query: 561 YGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQ 620
Y C+VDLLGRAG LE+AEE+IRSMP + D V+WG L SRIHGNV +GERAA L L
Sbjct: 528 YSCLVDLLGRAGFLEEAEELIRSMPFEPDAVVWGALFFGSRIHGNVHMGERAASKLLELD 587
Query: 621 PSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
P G VLL+N+Y DA WE A +RK M + G+++ PG S +
Sbjct: 588 PHDGGIYVLLANMYGDANMWEQARKVRKMMEERGVEKTPGCSSI 631
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 108/260 (41%), Gaps = 73/260 (28%)
Query: 8 SVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINL 67
++F+ +A+ D ++ +V+ L CS A+ G +H + K L N + +L+++
Sbjct: 374 ALFHEMQASSVAPD-KITVVNCLSACSQLGALDVGIWMHHYVDKHNLTMNVALGTALVDM 432
Query: 68 YAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMI 127
YAKCG I +A +VF++ P + +++T++I
Sbjct: 433 YAKCGNIKKAI-------------------------------QVFEEMPGRNSLTWTAII 461
Query: 128 MGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMID 187
G A + A+ F +M +G++P+E+T V+S+ H G ++D
Sbjct: 462 CGLALHGQPHAAISYFSEMISIGLVPDEITFIGVLSACCHGG---------------LVD 506
Query: 188 GFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVS-----WNVMLNGFAKAGLVELARE 242
+ R F +M + +S ++ +++ +AG +E A E
Sbjct: 507 --------------------QGRDYFYQMTSKYGISPKLKHYSCLVDLLGRAGFLEEAEE 546
Query: 243 LFERIP-SKDVVSWGTMIDG 261
L +P D V WG + G
Sbjct: 547 LIRSMPFEPDAVVWGALFFG 566
>gi|449442687|ref|XP_004139112.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Cucumis sativus]
Length = 681
Score = 365 bits (938), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 211/644 (32%), Positives = 331/644 (51%), Gaps = 74/644 (11%)
Query: 26 LVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGL-----ISQAKSM 80
L+S L C++ +++ ++IH+ + +GL S+ F +L L A C + + +
Sbjct: 57 LLSLLEACTS---MAKMKEIHAQMISTGLISDGF---ALSRLVAFCAISEWRNLDYCDKI 110
Query: 81 FDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREAL 140
++ + L+ + N+ I GY+ ++ PI + Y +M
Sbjct: 111 LNNAANLNVFSWNMAIRGYVESE-----------NPINAVLLYRNM-------------- 145
Query: 141 EVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMY 200
+R IP+ T + W + G VI+L D + + ++++
Sbjct: 146 -----LRKGSAIPDNYTYPLLFKVCAGFSLSWTANEILGHVIQLGFDSDLFVHNAIIHVL 200
Query: 201 CVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMID 260
C L+ AR +LF+ +D+VSW ++I+
Sbjct: 201 VSCGELLAAR-------------------------------KLFDESCVRDLVSWNSIIN 229
Query: 261 GYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDC 320
GY++ EA +Y M + P++V ++ ++SA + G ++H I + G +
Sbjct: 230 GYVRCGLADEAFDLYYKMGELNVMPDEVTMIGVVSASAQLENLALGRKLHQSIEEMGLNL 289
Query: 321 YDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ 380
+ ++ Y C I A++ FE K + SW ++ G+ + G++E A +LFN M
Sbjct: 290 TVPLANALMDMYIKCKNIEAAKILFENMTKKTVVSWTTMVIGYAKFGLLESAVRLFNEMP 349
Query: 381 KRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRW 440
++DV W+A+I G+ Q ++ AL LFH M + V P++IT+V+ A + G L G W
Sbjct: 350 EKDVVLWNALIGGFVQAKRSKEALALFHEMQASSVAPDKITVVNCLSACSQLGALDVGIW 409
Query: 441 AHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMH 500
H YV +++T+N L A++DMYAKCG+I A +VF + R + W AIICGLA+H
Sbjct: 410 MHHYVDKHNLTMNVALGTALVDMYAKCGNIKKAIQVFEEMPGRNSLT--WTAIICGLALH 467
Query: 501 GDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKH 560
G + + +S++ + + ITFIGVLS CCH GLVD G YF M S Y + P LKH
Sbjct: 468 GQPHAAISYFSEMISIGLVPDEITFIGVLSACCHGGLVDQGRDYFYQMTSKYGISPKLKH 527
Query: 561 YGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQ 620
Y C+VDLLGRAG LE+AEE+IRSMP + D V+WG L SRIHGNV +GERAA L L
Sbjct: 528 YSCLVDLLGRAGFLEEAEELIRSMPFEPDAVVWGALFFGSRIHGNVHMGERAASKLLELD 587
Query: 621 PSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
P G VLL+N+Y DA WE A +RK M + G+++ PG S +
Sbjct: 588 PHDGGIYVLLANMYGDANMWEQARKVRKMMEERGVEKTPGCSSI 631
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 108/260 (41%), Gaps = 73/260 (28%)
Query: 8 SVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINL 67
++F+ +A+ D ++ +V+ L CS A+ G +H + K L N + +L+++
Sbjct: 374 ALFHEMQASSVAPD-KITVVNCLSACSQLGALDVGIWMHHYVDKHNLTMNVALGTALVDM 432
Query: 68 YAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMI 127
YAKCG I +A +VF++ P + +++T++I
Sbjct: 433 YAKCGNIKKAI-------------------------------QVFEEMPGRNSLTWTAII 461
Query: 128 MGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMID 187
G A + A+ F +M +G++P+E+T V+S+ H G ++D
Sbjct: 462 CGLALHGQPHAAISYFSEMISIGLVPDEITFIGVLSACCHGG---------------LVD 506
Query: 188 GFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVS-----WNVMLNGFAKAGLVELARE 242
+ R F +M + +S ++ +++ +AG +E A E
Sbjct: 507 --------------------QGRDYFYQMTSKYGISPKLKHYSCLVDLLGRAGFLEEAEE 546
Query: 243 LFERIP-SKDVVSWGTMIDG 261
L +P D V WG + G
Sbjct: 547 LIRSMPFEPDAVVWGALFFG 566
>gi|224066034|ref|XP_002302000.1| predicted protein [Populus trichocarpa]
gi|222843726|gb|EEE81273.1| predicted protein [Populus trichocarpa]
Length = 797
Score = 365 bits (936), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 219/659 (33%), Positives = 346/659 (52%), Gaps = 28/659 (4%)
Query: 28 SALRYC--SAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCS 85
S L+ C + I+ S + +H+ + SG + I N LI++Y+K ++ A+ +FD
Sbjct: 16 SLLQICCLQSPISYSLARPVHAHMIASGFQPRGHILNRLIDIYSKSSKLNYARYLFDEIP 75
Query: 86 TLDPVACNIMISGYIRNDRLNDAREVFDKTPI--KCCVSYTSMIMGFAQNDCWREALEVF 143
D VA +I+ Y L +R++F TP+ + V Y +MI ++ N A+E+F
Sbjct: 76 QPDIVARTTLIAAYSAAGDLKLSRKIFSDTPLGMRDSVFYNAMITAYSHNHDGHAAIELF 135
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWE----CRMLHGLVIKLMIDGFVIISTN-LLN 198
DM+ P+ T SV+ + L + E C+ LH V+K GFV N L++
Sbjct: 136 CDMQRDNFRPDNYTFTSVLGA---LALVAEKEKHCQQLHCAVVKSGT-GFVTSVLNALIS 191
Query: 199 MYCVCSS---------LVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPS 249
Y C++ + EAR LFDEM R+ +SW ++ G+ K ++ A+E
Sbjct: 192 SYVKCAASPSAQSSSLMAEARKLFDEMPNRDELSWTTIITGYVKNNDLDAAKEFLNGTSK 251
Query: 250 KDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQI 309
K V+W MI GY EA M+R M+ I ++ +IS C A F G ++
Sbjct: 252 KLGVAWNAMISGYAHRGLYLEAFEMFRKMIMSKIQLDEFTFTSVISVCANAGCFRLGKEM 311
Query: 310 HSIIVKA----GFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIR 365
H+ +K D + +I FY CG++++A+ F + + SWN +++G++
Sbjct: 312 HAYFLKTVANPAPDVAMPVNNALITFYWKCGKVDIAQEIFNKMPERDLVSWNIILSGYVN 371
Query: 366 NGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSV 425
+++A+ FN M ++++ SW MISG AQ AL+ F+ M G +P +
Sbjct: 372 VRCMDEAKSFFNEMPEKNILSWIIMISGLAQIGFAEEALKFFNRMKLQGFEPCDYAFAGA 431
Query: 426 FCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTT 485
+ + G+LK GR H V+ + + A+I MYA+CG ++ A +F I
Sbjct: 432 IISCSVLGSLKHGRQLHAQVVRYGYESSLSAGNALITMYARCGVVDAAHCLF--INMPCV 489
Query: 486 SVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYF 545
WNA+I L HG ++++ ++ K I + I+F+ V+S C HAGLV G +YF
Sbjct: 490 DAISWNAMIAALGQHGQGTQAIELFEEMLKEGILPDRISFLTVISACSHAGLVKEGRKYF 549
Query: 546 KSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGN 605
SM +VY V PD +HY ++DLL RAG+ +A+EV+ SMP + IW LLA RIHGN
Sbjct: 550 DSMHNVYGVNPDEEHYARIIDLLCRAGKFSEAKEVMESMPFEPGAPIWEALLAGCRIHGN 609
Query: 606 VEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
+++G AA+ L L+P H + VLLSN+YA AG+W D +RK MRD G+K+ PG S +
Sbjct: 610 IDLGIEAAERLFELKPQHDGTYVLLSNMYAVAGQWNDMAKVRKLMRDRGVKKEPGCSWI 668
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 106/249 (42%), Gaps = 40/249 (16%)
Query: 10 FNSQK-ANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLY 68
FN K + DY A A+ CS ++ G+Q+H+ + + G ES+ N+LI +Y
Sbjct: 413 FNRMKLQGFEPCDY--AFAGAIISCSVLGSLKHGRQLHAQVVRYGYESSLSAGNALITMY 470
Query: 69 AKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIM 128
A+CG++ A +F + +D + S+ +MI
Sbjct: 471 ARCGVVDAAHCLFINMPCVDAI-------------------------------SWNAMIA 499
Query: 129 GFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLM-ID 187
Q+ +A+E+F +M G++P+ ++ +VIS+ H G + E R + + ++
Sbjct: 500 ALGQHGQGTQAIELFEEMLKEGILPDRISFLTVISACSHAGLVKEGRKYFDSMHNVYGVN 559
Query: 188 GFVIISTNLLNMYCVCSSLVEARSLFDEMK-ERNIVSWNVMLNGFAKAGLVEL----ARE 242
++++ C EA+ + + M E W +L G G ++L A
Sbjct: 560 PDEEHYARIIDLLCRAGKFSEAKEVMESMPFEPGAPIWEALLAGCRIHGNIDLGIEAAER 619
Query: 243 LFERIPSKD 251
LFE P D
Sbjct: 620 LFELKPQHD 628
>gi|359478743|ref|XP_002282912.2| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Vitis vinifera]
Length = 642
Score = 365 bits (936), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 217/640 (33%), Positives = 334/640 (52%), Gaps = 66/640 (10%)
Query: 26 LVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCS 85
+S L C + +SQ +QI S + +GL + F + LI A IS+ + + D C+
Sbjct: 9 FLSLLEKCKS---ISQLKQIQSQMVLTGLIEDGFASSRLIAFCA----ISEWRDL-DYCT 60
Query: 86 TLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF-R 144
NI+ + RN S+ I GF ++ REA+ ++ R
Sbjct: 61 -------NILFN--TRNPN---------------TFSWNVAIRGFLDSENPREAVVLYKR 96
Query: 145 DMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCS 204
++ G P+ T + + L I + G V+ L D + +S ++++ C
Sbjct: 97 VLQCDGTKPDNYTYPLLFKACARLSLIRMGSEILGHVLHLGFDSDIFVSNAVIHLLVSCG 156
Query: 205 SLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQ 264
L AR +FD+ R++VSWN M+NG+ + G W
Sbjct: 157 DLDGARKMFDKSCVRDLVSWNSMINGYVRRG-------------------WAY------- 190
Query: 265 VERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFI 324
EAL YR M +GI P++V ++ ++S+C + G + H I + G +
Sbjct: 191 -----EALNFYREMKVEGIKPDEVTMIGVVSSCAQLEDLDLGRESHCYIEENGLKLTVPL 245
Query: 325 QATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDV 384
++ Y CG + AR F+ + SW ++ G+ ++G+++ A +LF+ M +DV
Sbjct: 246 ANALMDMYMKCGNLESARKLFDSMTNKTMVSWTTMVVGYAQSGLLDMAWKLFDEMPDKDV 305
Query: 385 YSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEY 444
W+AMI GY + AL LF+ M + P+E+TMVS A + G L G W H Y
Sbjct: 306 VPWNAMIGGYVHANRGKEALALFNEMQAMNINPDEVTMVSCLSACSQLGALDVGIWIHHY 365
Query: 445 VLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDAN 504
+ + ++LN L A+IDMYAKCG I A +VF + R + W AII GLA+HG+A+
Sbjct: 366 IEKHELSLNVALGTALIDMYAKCGKITKAIQVFQELPGRNSLT--WTAIISGLALHGNAH 423
Query: 505 LTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCM 564
+ +S++ ++ + +TF+G+LS CCH GLV+ G +YF M S +N+ P LKHY CM
Sbjct: 424 GAIAYFSEMIDNSVMPDEVTFLGLLSACCHGGLVEEGRKYFSQMSSKFNLSPKLKHYSCM 483
Query: 565 VDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHG 624
VDLLGRAG LE+AEE+I+SMP++AD V+WG L A RIHGNV +GERAA L + P
Sbjct: 484 VDLLGRAGLLEEAEELIKSMPIEADAVVWGALFFACRIHGNVLMGERAASKLLQMDPHDS 543
Query: 625 PSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
VLL+N+Y +A W++A RK MR G+++ PG S +
Sbjct: 544 GIYVLLANMYGEAEMWKEAGKARKLMRQRGVEKTPGCSSI 583
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/374 (22%), Positives = 170/374 (45%), Gaps = 70/374 (18%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E+ ++ + C+ + G++ H I ++GL+ + N+L+++Y KCG + A+ +FD
Sbjct: 208 EVTMIGVVSSCAQLEDLDLGRESHCYIEENGLKLTVPLANALMDMYMKCGNLESARKLFD 267
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
S + V+ M+ GY ++ L+ A ++FD+ P K V + +MI G+ + +EAL +
Sbjct: 268 SMTNKTMVSWTTMVVGYAQSGLLDMAWKLFDEMPDKDVVPWNAMIGGYVHANRGKEALAL 327
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLG----GIWECRMLHGLVIKLMIDGFVIISTNLLN 198
F +M+ + + P+EVT+ S +S+ LG GIW +H + K + V + T L++
Sbjct: 328 FNEMQAMNINPDEVTMVSCLSACSQLGALDVGIW----IHHYIEKHELSLNVALGTALID 383
Query: 199 MYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTM 258
MY C + +A +F E+ RN ++W +++G A G
Sbjct: 384 MYAKCGKITKAIQVFQELPGRNSLTWTAIISGLALHG----------------------- 420
Query: 259 IDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGF 318
A+ + M+ + + P++V + L+SAC H +V+
Sbjct: 421 --------NAHGAIAYFSEMIDNSVMPDEVTFLGLLSAC-----------CHGGLVEE-- 459
Query: 319 DCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNN 378
GR +++ + + + ++ ++ R G++E+A +L +
Sbjct: 460 -----------------GRKYFSQMSSKFNLSPKLKHYSCMVDLLGRAGLLEEAEELIKS 502
Query: 379 MQ-KRDVYSWSAMI 391
M + D W A+
Sbjct: 503 MPIEADAVVWGALF 516
>gi|328774755|gb|AEB39777.1| pentatricopeptide repeat protein 91 [Funaria hygrometrica]
Length = 890
Score = 365 bits (936), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 208/668 (31%), Positives = 340/668 (50%), Gaps = 71/668 (10%)
Query: 2 PLDHFHSVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQ 61
P F + + AN++ + + +S L+ C+ + + + ++IH+++ SG+E++ +
Sbjct: 160 PAKAFDTFERMKDANIEPN--RITFLSILKACNNYSMLEKAREIHTVVKASGMETDVAVA 217
Query: 62 NSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCV 121
+LI +Y+KCG IS +AC E+F K + V
Sbjct: 218 TALITMYSKCGEIS--------------LAC-----------------EIFQKMKERNVV 246
Query: 122 SYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLV 181
S+T++I AQ+ EA E++ M G+ PN VT S+++S + R +H +
Sbjct: 247 SWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHI 306
Query: 182 IKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELAR 241
+ ++ V+++ L+ MYC C+ + + AR
Sbjct: 307 SERGLETDVVVANALITMYCKCNCIQD-------------------------------AR 335
Query: 242 ELFERIPSKDVVSWGTMIDGYLQV-----ERLSEALTMYRAMLCDGIAPNDVMIVDLISA 296
E F+R+ +DV+SW MI GY Q E L E + M +G+ PN V + ++ A
Sbjct: 336 ETFDRMSKRDVISWSAMIAGYAQSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKA 395
Query: 297 CGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASW 356
C A +G QIH+ I K GF+ +Q I + YA CG I A F ++ +W
Sbjct: 396 CSVHGALEQGRQIHAEISKVGFESDRSLQTAIFNMYAKCGSIYEAEQVFSKMENKNVVAW 455
Query: 357 NALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVK 416
+L+ +I+ G + A ++F+ M R+V SW+ MI+GYAQ+ EL M G +
Sbjct: 456 ASLLTMYIKCGDLTSAEKVFSEMSTRNVVSWNLMIAGYAQSGDIAKVFELLSSMKVEGFQ 515
Query: 417 PNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEV 476
P+ +T++S+ A + L+ G+ H + + + ++ ++I MY+KCG + A V
Sbjct: 516 PDRVTIISILEACGALSALERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGEVTEARTV 575
Query: 477 FYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAG 536
F I +R T WNA++ G HG + ++ + K + N ITF V+S C AG
Sbjct: 576 FDKISNRDTVA--WNAMLAGYGQHGIGPEAVDLFKRMLKERVPPNEITFTAVISACGRAG 633
Query: 537 LVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTL 596
LV G F+ M+ + ++P +HYGCMVDLLGRAG+L++AEE I+ MP + D+ +W L
Sbjct: 634 LVQEGREIFRIMQEDFRMKPGKQHYGCMVDLLGRAGRLQEAEEFIQRMPCEPDISVWHAL 693
Query: 597 LAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMK 656
L A + H NV++ E AA + L+PS+ V LSNIYA AGRW+D+ +RK M D G+K
Sbjct: 694 LGACKSHDNVQLAEWAAHHILRLEPSNASVYVTLSNIYAQAGRWDDSTKVRKVMDDKGLK 753
Query: 657 RLPGFSGV 664
+ G S +
Sbjct: 754 KDRGESSI 761
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 149/640 (23%), Positives = 263/640 (41%), Gaps = 123/640 (19%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
+ +C+ G+ +H + + GL + ++ NSLIN Y+K G ++ +
Sbjct: 85 IEHCAKLRRFEDGKMVHKQLDELGLAIDIYLGNSLINFYSKFGDVASVE----------- 133
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
+VF + ++ V+++SMI +A N+ +A + F M+
Sbjct: 134 --------------------QVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKDA 173
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
+ PN +T S++ + + + + R +H +V ++ V ++T L+ MY C + A
Sbjct: 174 NIEPNRITFLSILKACNNYSMLEKAREIHTVVKASGMETDVAVATALITMYSKCGEISLA 233
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLS 269
+F +MKERN+VSW ++ A Q +L+
Sbjct: 234 CEIFQKMKERNVVSWTAIIQANA-------------------------------QHRKLN 262
Query: 270 EALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATII 329
EA +Y ML GI+PN V V L+++C A G +IHS I + G + + +I
Sbjct: 263 EAFELYEKMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDVVVANALI 322
Query: 330 HFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSA 389
Y C I AR F+ K + SW+A+IAG+ +
Sbjct: 323 TMYCKCNCIQDARETFDRMSKRDVISWSAMIAGYAQ------------------------ 358
Query: 390 MISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNS 449
SGY E + +L M GV PN++T +S+ A + G L++GR H +
Sbjct: 359 --SGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACSVHGALEQGRQIHAEISKVG 416
Query: 450 ITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDR-------------------------- 483
+ +L AI +MYAKCGSI A +VF + ++
Sbjct: 417 FESDRSLQTAIFNMYAKCGSIYEAEQVFSKMENKNVVAWASLLTMYIKCGDLTSAEKVFS 476
Query: 484 ---TTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDL 540
T +V WN +I G A GD ++ S ++ + + +T I +L C ++
Sbjct: 477 EMSTRNVVSWNLMIAGYAQSGDIAKVFELLSSMKVEGFQPDRVTIISILEACGALSALER 536
Query: 541 GERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAAS 600
G + + +E D ++ + + G++ +A V + + D V W +LA
Sbjct: 537 G-KLVHAEAVKLGLESDTVVATSLIGMYSKCGEVTEARTVFDKISNR-DTVAWNAMLAGY 594
Query: 601 RIHGNVEVGERAAKSLAG-LQPSHGPSRVLLSNIYADAGR 639
HG +G A L+ P+ + + + + GR
Sbjct: 595 GQHG---IGPEAVDLFKRMLKERVPPNEITFTAVISACGR 631
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 89/305 (29%), Positives = 148/305 (48%), Gaps = 8/305 (2%)
Query: 299 RAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQF----ELGIKDHIA 354
+A E +Q+ II + G II A R ++ ELG+ I
Sbjct: 55 KAGRLKEAIQLLGIIKQRGLLVNSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAIDIY 114
Query: 355 SWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAG 414
N+LI + + G + Q+F M RDV +WS+MI+ YA N P A + F M DA
Sbjct: 115 LGNSLINFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKDAN 174
Query: 415 VKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAF 474
++PN IT +S+ A + L++ R H V + + + ++ A+I MY+KCG I+ A
Sbjct: 175 IEPNRITFLSILKACNNYSMLEKAREIHTVVKASGMETDVAVATALITMYSKCGEISLAC 234
Query: 475 EVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCH 534
E+F +++R +V W AII A H N ++Y + + I N++TF+ +L++C
Sbjct: 235 EIFQKMKER--NVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCNT 292
Query: 535 AGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWG 594
++ G R S S +E D+ ++ + + ++DA E M K DV+ W
Sbjct: 293 PEALNRGRR-IHSHISERGLETDVVVANALITMYCKCNCIQDARETFDRMS-KRDVISWS 350
Query: 595 TLLAA 599
++A
Sbjct: 351 AMIAG 355
>gi|413933352|gb|AFW67903.1| pentatricopeptide repeat protein PPR868-14 [Zea mays]
Length = 788
Score = 364 bits (935), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 203/608 (33%), Positives = 336/608 (55%), Gaps = 4/608 (0%)
Query: 56 SNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKT 115
+++F + +++ + K G I+ A+ +F V+ M+ ++ + DA E++++
Sbjct: 147 ASSFTYDFMVSEHVKAGDIASARRLFYGMPEKSVVSYTTMVDALMKRGSVRDAVELYERC 206
Query: 116 PIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECR 175
P+ +T+MI GF +N+ ++A VFR M V PN VTL VI + V G
Sbjct: 207 PLHSVAFFTAMISGFVRNELHKDAFTVFRKMLTCSVRPNVVTLICVIKACVGAGEFDLAM 266
Query: 176 MLHGLVIKL-MIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKA 234
+ GL +K + + + + +L+ +Y AR +FD+M+ R++VSW +L+ +A
Sbjct: 267 GVVGLAVKCNLFEKSIEVHNSLITLYLRMGDAAAARRVFDDMEVRDVVSWTALLDVYADL 326
Query: 235 GLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLI 294
G ++ AR + + +P+++ VSWGT+I + Q +EAL +Y ML DG PN ++
Sbjct: 327 GDLDGARRVLDAMPARNEVSWGTLIARHEQKGDTAEALKLYSQMLADGCRPNISCFSSVL 386
Query: 295 SACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIA 354
SAC G +IH+ +K G F+ +++I Y C + A+ F + +
Sbjct: 387 SACATLQDLRGGTRIHANALKMGSSTNLFVSSSLIDMYCKCKQCTYAQRVFNSLPEKNTV 446
Query: 355 SWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAG 414
WN+LI+G+ NG + +A LFN M R+ SW+ MISGYA+N + AL F+ M+ +G
Sbjct: 447 CWNSLISGYSWNGKMVEAEGLFNKMPARNSVSWNTMISGYAENRRFGDALNYFYAMLASG 506
Query: 415 VKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAF 474
P EIT+ SV A A+ +L+ GR H ++ I N + A+ DMYAK G ++++
Sbjct: 507 HIPGEITLSSVLLACANLCSLEMGRMVHAEIVKLGIEDNIFMGTALCDMYAKSGDLDSSR 566
Query: 475 EVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCH 534
VFY + ++ W A++ GLA +G A ++ ++ D+ + I N TF+ +L C H
Sbjct: 567 RVFYQMPEKNNIT--WTAMVQGLAENGFAEESISLFEDMIENGIAPNEHTFLAILFACSH 624
Query: 535 AGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWG 594
GLV+ YF++M++ + + P KHY CMVD+L RAG L +AEE++ + + D W
Sbjct: 625 CGLVEQAIHYFETMQA-HGIPPKSKHYTCMVDVLARAGCLPEAEELLMKVSSELDTSSWS 683
Query: 595 TLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCG 654
+LL+A + N E+GERAAK L L+ + VLLSN+YA G+W+DA R M+
Sbjct: 684 SLLSACSTYRNKEIGERAAKKLHELEKDNTAGYVLLSNMYASCGKWKDAAETRILMQGAS 743
Query: 655 MKRLPGFS 662
+K+ G S
Sbjct: 744 LKKDAGCS 751
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 118/468 (25%), Positives = 220/468 (47%), Gaps = 37/468 (7%)
Query: 54 LESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFD 113
E + + NSLI LY + G + A+ +FD D V+ ++ Y L+ AR V D
Sbjct: 278 FEKSIEVHNSLITLYLRMGDAAAARRVFDDMEVRDVVSWTALLDVYADLGDLDGARRVLD 337
Query: 114 KTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWE 173
P + VS+ ++I Q EAL+++ M G PN +SV+S+ L +
Sbjct: 338 AMPARNEVSWGTLIARHEQKGDTAEALKLYSQMLADGCRPNISCFSSVLSACATLQDLRG 397
Query: 174 CRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAK 233
+H +K+ + +S++L++MYC C A+ +F+ + E+N V WN +++G++
Sbjct: 398 GTRIHANALKMGSSTNLFVSSSLIDMYCKCKQCTYAQRVFNSLPEKNTVCWNSLISGYSW 457
Query: 234 AGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDL 293
G + A LF ++P+++ VSW TMI GY + R +AL + AML G P ++ + +
Sbjct: 458 NGKMVEAEGLFNKMPARNSVSWNTMISGYAENRRFGDALNYFYAMLASGHIPGEITLSSV 517
Query: 294 ISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQF-ELGIKDH 352
+ AC + G +H+ IVK G + F+ + YA G ++ +R F ++ K++
Sbjct: 518 LLACANLCSLEMGRMVHAEIVKLGIEDNIFMGTALCDMYAKSGDLDSSRRVFYQMPEKNN 577
Query: 353 IASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVD 412
I +W A++ G NG E+ ++ LF M++
Sbjct: 578 I-TWTAMVQGLAENGFAEE-------------------------------SISLFEDMIE 605
Query: 413 AGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINT 472
G+ PNE T +++ A + G +++ E + + I ++D+ A+ G +
Sbjct: 606 NGIAPNEHTFLAILFACSHCGLVEQAIHYFETMQAHGIPPKSKHYTCMVDVLARAGCLPE 665
Query: 473 AFEVFYHIRDRTTSVSPWNAIICGLAMHGDANL---TLKIYSDLEKRN 517
A E+ + + S W++++ + + + + K +LEK N
Sbjct: 666 AEELLMKVSSELDT-SSWSSLLSACSTYRNKEIGERAAKKLHELEKDN 712
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 115/285 (40%), Gaps = 75/285 (26%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E+ L S L C+ ++ G+ +H+ I K G+E N F+ +L ++YAK G
Sbjct: 511 EITLSSVLLACANLCSLEMGRMVHAEIVKLGIEDNIFMGTALCDMYAKSG---------- 560
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
L+ +R VF + P K +++T+M+ G A+N E++ +
Sbjct: 561 ---------------------DLDSSRRVFYQMPEKNNITWTAMVQGLAENGFAEESISL 599
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
F DM G+ PNE T +++ + H
Sbjct: 600 FEDMIENGIAPNEHTFLAILFACSH----------------------------------- 624
Query: 203 CSSLVEARSLFDEMKERNIVS----WNVMLNGFAKAGLVELARELFERIPSK-DVVSWGT 257
C + +A F+ M+ I + M++ A+AG + A EL ++ S+ D SW +
Sbjct: 625 CGLVEQAIHYFETMQAHGIPPKSKHYTCMVDVLARAGCLPEAEELLMKVSSELDTSSWSS 684
Query: 258 MIDG---YLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGR 299
++ Y E A + D A V++ ++ ++CG+
Sbjct: 685 LLSACSTYRNKEIGERAAKKLHELEKDNTA-GYVLLSNMYASCGK 728
>gi|359483031|ref|XP_002271968.2| PREDICTED: pentatricopeptide repeat-containing protein At4g02750
[Vitis vinifera]
Length = 788
Score = 364 bits (935), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 217/671 (32%), Positives = 358/671 (53%), Gaps = 65/671 (9%)
Query: 49 IFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDA 108
+F+ NT NS+I+ +AK G IS A+ +FD + V+ N MI+ Y+ NDR+ +A
Sbjct: 37 VFQHMTHKNTVTHNSMISAFAKNGRISDARQLFDGMPQRNIVSWNSMIAAYLHNDRVEEA 96
Query: 109 REVFDKTPIKCCVSYT--------------------------------SMIMGFAQNDCW 136
R++FDK P + S+T +M+ G+A+N +
Sbjct: 97 RQLFDKMPTRDLYSWTLMITCYTRNGELAKARNLFNLLPYKWNPVCCNAMVAGYAKNRQF 156
Query: 137 REALEVFRDMRILGVIP-NEVTLASVISSSVHLGGIWECRMLHGLVI--KLMIDGFVII- 192
EA +F M ++ N + + + LG + M V+ LM+DGFV +
Sbjct: 157 DEARRLFDAMPAKDLVSWNSMLTGYTRNGEMRLGLQFFEEMAERDVVSWNLMVDGFVEVG 216
Query: 193 ----------------STNLLNMYCVCS---SLVEARSLFDEMKERNIVSWNVMLNGFAK 233
+ + + M C + + EAR LFD+M RN+V+WN M+ + +
Sbjct: 217 DLNSSWEFFEKIPNPNTVSWVTMLCGFARFGKIAEARRLFDQMPIRNVVAWNAMIAAYVQ 276
Query: 234 AGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDL 293
V+ A LF +P K+ +SW T+I+GY+++ +L EA + M +A MI
Sbjct: 277 NCHVDEAISLFMEMPEKNSISWTTVINGYVRMGKLDEARQLLNQMPYRNVAAQTAMISGY 336
Query: 294 ISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHI 353
+ + + QI + I C++ T+I Y+ CGR++ A F+ +K I
Sbjct: 337 V----QNKRMDDARQIFNQISIRDVVCWN----TMIAGYSQCGRMDEALHLFKQMVKKDI 388
Query: 354 ASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDA 413
SWN ++A + + G ++ A ++F M+++++ SW+++ISG QN AL+ F M
Sbjct: 389 VSWNTMVASYAQVGQMDAAIKIFEEMKEKNIVSWNSLISGLTQNGSYLDALKSFMLMGHE 448
Query: 414 GVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTA 473
G KP++ T + A L+ G+ H+ V+ + + +S A+I MYAKCGSI++A
Sbjct: 449 GQKPDQSTFACGLSSCAHLAALQVGKQLHQLVMKSGYATDLFVSNALITMYAKCGSISSA 508
Query: 474 FEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCC 533
E+ + D VS WN++I A++G+ LK++ +E + + +TF+G+LS C
Sbjct: 509 -ELLFKDIDHFDVVS-WNSLIAAYALNGNGREALKLFHKMEVEGVAPDEVTFVGILSACS 566
Query: 534 HAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIW 593
H GL+D G + FK M YN+EP +HY CMVDLLGRAG+LE+A +++R M + A+ IW
Sbjct: 567 HVGLIDQGLKLFKCMVQAYNIEPLAEHYACMVDLLGRAGRLEEAFQLVRGMKINANAGIW 626
Query: 594 GTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDC 653
G LL A RIHGN+E+ + AA+ L +P + VLLSN+ A+AGRW++ +R+ M++
Sbjct: 627 GALLGACRIHGNLELAKFAAEKLLEFEPHKTSNYVLLSNMQAEAGRWDEVARVRRLMKEK 686
Query: 654 GMKRLPGFSGV 664
G ++ PG+S +
Sbjct: 687 GAEKQPGWSWI 697
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 95/393 (24%), Positives = 183/393 (46%), Gaps = 29/393 (7%)
Query: 208 EARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVER 267
EA +F M +N V+ N M++ FAK G + AR+LF+ +P +++VSW +MI YL +R
Sbjct: 33 EAIKVFQHMTHKNTVTHNSMISAFAKNGRISDARQLFDGMPQRNIVSWNSMIAAYLHNDR 92
Query: 268 LSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQAT 327
+ EA ++ D + D+ L+ C GE + ++ +
Sbjct: 93 VEEARQLF-----DKMPTRDLYSWTLMITC--YTRNGELAKARNLFNLLPYKWNPVCCNA 145
Query: 328 IIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSW 387
++ YA + + AR F+ + SWN+++ G+ RNG + Q F M +RDV SW
Sbjct: 146 MVAGYAKNRQFDEARRLFDAMPAKDLVSWNSMLTGYTRNGEMRLGLQFFEEMAERDVVSW 205
Query: 388 SAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYV-L 446
+ M+ G+ + N + E F + + PN ++ V++ C A G + E R + + +
Sbjct: 206 NLMVDGFVEVGDLNSSWEFFEKIPN----PNTVSWVTMLCGFARFGKIAEARRLFDQMPI 261
Query: 447 NNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLT 506
N + N A+I Y + ++ A +F + ++ S+S W +I G G +
Sbjct: 262 RNVVAWN-----AMIAAYVQNCHVDEAISLFMEMPEK-NSIS-WTTVINGYVRMGKLDEA 314
Query: 507 LKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVD 566
++ + + RN+ + G + +D + F + D+ + M+
Sbjct: 315 RQLLNQMPYRNVAAQTAMISGYVQN----KRMDDARQIFNQISI-----RDVVCWNTMIA 365
Query: 567 LLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAA 599
+ G++++A + + M +K D+V W T++A+
Sbjct: 366 GYSQCGRMDEALHLFKQM-VKKDIVSWNTMVAS 397
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 101/223 (45%), Gaps = 38/223 (17%)
Query: 35 AHIAVSQ-GQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACN 93
AH+A Q G+Q+H L+ KSG ++ F+ N+LI +YAKCG IS A+ +F D V+ N
Sbjct: 465 AHLAALQVGKQLHQLVMKSGYATDLFVSNALITMYAKCGSISSAELLFKDIDHFDVVSWN 524
Query: 94 IMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIP 153
+I+ Y A N REAL++F M + GV P
Sbjct: 525 SLIAAY-------------------------------ALNGNGREALKLFHKMEVEGVAP 553
Query: 154 NEVTLASVISSSVHLGGIWE-CRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSL 212
+EVT ++S+ H+G I + ++ +V I+ ++++ L EA L
Sbjct: 554 DEVTFVGILSACSHVGLIDQGLKLFKCMVQAYNIEPLAEHYACMVDLLGRAGRLEEAFQL 613
Query: 213 FDEMK-ERNIVSWNVMLNGFAKAGLVELAR----ELFERIPSK 250
MK N W +L G +ELA+ +L E P K
Sbjct: 614 VRGMKINANAGIWGALLGACRIHGNLELAKFAAEKLLEFEPHK 656
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 132/279 (47%), Gaps = 19/279 (6%)
Query: 321 YDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ 380
Y F I G+I+ A F+ + + N++I+ F +NG I DARQLF+ M
Sbjct: 14 YVFRHNLKITQLGKSGQIDEAIKVFQHMTHKNTVTHNSMISAFAKNGRISDARQLFDGMP 73
Query: 381 KRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRW 440
+R++ SW++MI+ Y N++ A +LF M + + M++ + +G L + R
Sbjct: 74 QRNIVSWNSMIAAYLHNDRVEEARQLFDKMPTRDLYSWTL-MITCY---TRNGELAKARN 129
Query: 441 AHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMH 500
+ N A++ YAK + A +F + + + WN+++ G +
Sbjct: 130 LFNLL---PYKWNPVCCNAMVAGYAKNRQFDEARRLFDAMPAK--DLVSWNSMLTGYTRN 184
Query: 501 GDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKH 560
G+ L L+ + ++ +R++ +++ ++ G ++ +F+ + + P+
Sbjct: 185 GEMRLGLQFFEEMAERDV----VSWNLMVDGFVEVGDLNSSWEFFEKIPN-----PNTVS 235
Query: 561 YGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAA 599
+ M+ R G++ +A + MP++ +VV W ++AA
Sbjct: 236 WVTMLCGFARFGKIAEARRLFDQMPIR-NVVAWNAMIAA 273
>gi|347954518|gb|AEP33759.1| organelle transcript processing 82, partial [Brassica oleracea]
Length = 691
Score = 363 bits (932), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 206/565 (36%), Positives = 306/565 (54%), Gaps = 36/565 (6%)
Query: 103 DRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVI 162
D L A VF+ + + +M+ G A + LE++ M G +PN T ++
Sbjct: 31 DGLPYAVSVFETXQEPNLLIWNTMLRGLASSSDLVSPLEMYVRMVSXGHVPNAYTFPFLL 90
Query: 163 SSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIV 222
S E R +H V+KL + T+L++MY L +AR +FD +R++V
Sbjct: 91 KSCAKSKTFEEGRQIHAQVMKLGCELDRYAHTSLISMYARNGRLEDARKVFDXSSQRDVV 150
Query: 223 SWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDG 282
S ++ G+A G V AR++F+ I +DVVSW MI GY++ EAL +++ M+
Sbjct: 151 SCTALITGYASRGDVRSARKVFDXITERDVVSWNAMITGYVENCGYEEALELFKEMMRTN 210
Query: 283 IAPNDVMIVDLISACGRAMAFGEGLQIHSIIV-KAGFDCYDFIQATIIHFYAACGRINLA 341
+ P++ +V ++SAC ++ + G +IH+++ GF I I Y+ CG +
Sbjct: 211 VRPDEGTLVSVLSACAQSGSIELGREIHTLVDDHHGFGSSLKIVNAFIGLYSKCGDV--- 267
Query: 342 RLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPN 401
E A LF + +DV SW+ +I GY
Sbjct: 268 ----------------------------EIASGLFEGLSCKDVVSWNTLIGGYTHMNLYK 299
Query: 402 MALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLN--NSITLNDNLSAA 459
AL LF M+ +G PN++TM+SV A A G + GRW H Y+ +T L +
Sbjct: 300 EALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNGSALRTS 359
Query: 460 IIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIK 519
+IDMYAKCG I A +VF + + S+S WNA+I G AMHG AN ++S + K I+
Sbjct: 360 LIDMYAKCGDIEAAHQVFNSMMHK--SLSSWNAMIFGFAMHGRANAAFDLFSRMRKNGIE 417
Query: 520 LNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEE 579
+ IT +G+LS C H+GL+DLG FKS+ YN+ P L+HYGCM+DLLG AG ++AEE
Sbjct: 418 PDDITLVGLLSACSHSGLLDLGRHIFKSVTQDYNITPKLEHYGCMIDLLGHAGLFKEAEE 477
Query: 580 VIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGR 639
+I MPM+ D VIW +LL A ++HGN+E+ E A+ L ++P + S VLLSNIYA AGR
Sbjct: 478 IIHMMPMEPDGVIWCSLLKACKMHGNLELAESFAQKLMEIEPENSGSYVLLSNIYATAGR 537
Query: 640 WEDAFSIRKEMRDCGMKRLPGFSGV 664
WED IR+ + GMK++PG S +
Sbjct: 538 WEDVARIREVLNGKGMKKVPGCSSI 562
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 135/482 (28%), Positives = 218/482 (45%), Gaps = 71/482 (14%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
L+ C+ +G+QIH+ + K G E + + SLI++YA+ G + A+ +FD S D
Sbjct: 90 LKSCAKSKTFEEGRQIHAQVMKLGCELDRYAHTSLISMYARNGRLEDARKVFDXSSQRDV 149
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
V+C +I+GY + AR+VFD + VS+ +MI G+ +N + EALE+F++M
Sbjct: 150 VSCTALITGYASRGDVRSARKVFDXITERDVVSWNAMITGYVENCGYEEALELFKEMMRT 209
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGF---VIISTNLLNMYCVCSSL 206
V P+E TL SV+S+ G I R +H LV GF + I + +Y C +
Sbjct: 210 NVRPDEGTLVSVLSACAQSGSIELGREIHTLVDDH--HGFGSSLKIVNAFIGLYSKCGDV 267
Query: 207 VEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVE 266
A LF+ + +++VSWN ++ G+ L +
Sbjct: 268 EIASGLFEGLSCKDVVSWNTLIGGYTHMNLYK---------------------------- 299
Query: 267 RLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVK--AGFDCYDFI 324
EAL +++ ML G +PNDV ++ ++ AC A G IH I K G +
Sbjct: 300 ---EALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNGSAL 356
Query: 325 QATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDV 384
+ ++I YA CG I A F + ++SWNA+I GF +G
Sbjct: 357 RTSLIDMYAKCGDIEAAHQVFNSMMHKSLSSWNAMIFGFAMHG----------------- 399
Query: 385 YSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEY 444
+ N A +LF M G++P++IT+V + A + SG L GR +
Sbjct: 400 --------------RANAAFDLFSRMRKNGIEPDDITLVGLLSACSHSGLLDLGRHIFKS 445
Query: 445 VLNN-SITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDA 503
V + +IT +ID+ G A E+ + + V W +++ MHG+
Sbjct: 446 VTQDYNITPKLEHYGCMIDLLGHAGLFKEAEEIIHMMPMEPDGVI-WCSLLKACKMHGNL 504
Query: 504 NL 505
L
Sbjct: 505 EL 506
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 125/414 (30%), Positives = 197/414 (47%), Gaps = 48/414 (11%)
Query: 201 CVCSS----LVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWG 256
CV S L A S+F+ +E N++ WN ML G A S D+VS
Sbjct: 24 CVVSPHFDGLPYAVSVFETXQEPNLLIWNTMLRGLAS---------------SSDLVS-- 66
Query: 257 TMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKA 316
L MY M+ G PN L+ +C ++ F EG QIH+ ++K
Sbjct: 67 --------------PLEMYVRMVSXGHVPNAYTFPFLLKSCAKSKTFEEGRQIHAQVMKL 112
Query: 317 GFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLF 376
G + + ++I YA GR+ AR F+ + + S ALI G+ G + AR++F
Sbjct: 113 GCELDRYAHTSLISMYARNGRLEDARKVFDXSSQRDVVSCTALITGYASRGDVRSARKVF 172
Query: 377 NNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLK 436
+ + +RDV SW+AMI+GY +N ALELF M+ V+P+E T+VSV A A SG+++
Sbjct: 173 DXITERDVVSWNAMITGYVENCGYEEALELFKEMMRTNVRPDEGTLVSVLSACAQSGSIE 232
Query: 437 EGRWAHEYVLN-NSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIIC 495
GR H V + + + + A I +Y+KCG + A +F + + V WN +I
Sbjct: 233 LGREIHTLVDDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLFEGLSCK--DVVSWNTLIG 290
Query: 496 GLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYF-----KSMKS 550
G L ++ ++ + N +T + VL C H G +D+G R+ K +K
Sbjct: 291 GYTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIG-RWIHVYIDKRLKG 349
Query: 551 VYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHG 604
V N L+ ++D+ + G +E A +V SM M + W ++ +HG
Sbjct: 350 VTNGSA-LR--TSLIDMYAKCGDIEAAHQVFNSM-MHKSLSSWNAMIFGFAMHG 399
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 129/296 (43%), Gaps = 65/296 (21%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLI-FKSGLESNTFIQNSLINLYAKCGLISQAKSMF 81
E LVS L C+ ++ G++IH+L+ G S+ I N+ I LY+KCG + A +F
Sbjct: 215 EGTLVSVLSACAQSGSIELGREIHTLVDDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLF 274
Query: 82 DSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALE 141
+ S D V+ N +I GY + ++EAL
Sbjct: 275 EGLSCKDVVSWNTLIGGY-------------------------------THMNLYKEALL 303
Query: 142 VFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLM--IDGFVIISTNLLNM 199
+F++M G PN+VT+ SV+ + HLG I R +H + K + + + T+L++M
Sbjct: 304 LFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNGSALRTSLIDM 363
Query: 200 YCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMI 259
Y C + A +F+ M +++ SWN M+ GFA G A +LF R
Sbjct: 364 YAKCGDIEAAHQVFNSMMHKSLSSWNAMIFGFAMHGRANAAFDLFSR------------- 410
Query: 260 DGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVK 315
M +GI P+D+ +V L+SAC + G I + +
Sbjct: 411 ------------------MRKNGIEPDDITLVGLLSACSHSGLLDLGRHIFKSVTQ 448
>gi|125588087|gb|EAZ28751.1| hypothetical protein OsJ_12773 [Oryza sativa Japonica Group]
Length = 698
Score = 363 bits (932), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 191/567 (33%), Positives = 323/567 (56%), Gaps = 4/567 (0%)
Query: 99 YIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTL 158
+ ++ RL DAR VF + P + VS+T M++G + + EA++ DM G P + TL
Sbjct: 2 FAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQFTL 61
Query: 159 ASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKE 218
+V+SS R +H V+KL + V ++ ++LNMY C A ++F+ M
Sbjct: 62 TNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERMPV 121
Query: 219 RNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAM 278
R++ SWN M++ G ++LA LFE +P + +VSW MI GY Q ++AL ++ M
Sbjct: 122 RSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSRM 181
Query: 279 LCDG-IAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGR 337
L + +AP++ I ++SAC G Q+H+ I++ + +I YA G
Sbjct: 182 LHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGS 241
Query: 338 INLARLQFELGIKD--HIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYA 395
+ AR + ++ ++ S+ AL+ G+++ G +E AR++F M RDV +W+AMI GY
Sbjct: 242 VENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIVGYE 301
Query: 396 QNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDN 455
QN + + A++LF M+ G +PN T+ +V AS L G+ H + + + + +
Sbjct: 302 QNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQSSS 361
Query: 456 LSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEK 515
+S AII MYA+ GS A +F + R +++ W ++I LA HG + ++ ++ +
Sbjct: 362 VSNAIITMYARSGSFPWARRMFDQVCWRKETIT-WTSMIVALAQHGQGEEAVGLFEEMLR 420
Query: 516 RNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLE 575
++ + IT++GVLS C HAG V+ G+RY+ +K+ + + P++ HY CMVDLL RAG
Sbjct: 421 AGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFS 480
Query: 576 DAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYA 635
+A+E IR MP++ D + WG+LL+A R+H N E+ E AA+ L + P++ + ++N+Y+
Sbjct: 481 EAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSAIANVYS 540
Query: 636 DAGRWEDAFSIRKEMRDCGMKRLPGFS 662
GRW DA I K ++ +++ GFS
Sbjct: 541 ACGRWSDAARIWKARKEKAVRKETGFS 567
Score = 191 bits (486), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 128/488 (26%), Positives = 237/488 (48%), Gaps = 37/488 (7%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
+ L + L C+ A + G+++HS + K GL S + NS++N+Y KCG A ++F+
Sbjct: 58 QFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFE 117
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+ N M+S R++ A +F+ P + VS+ +MI G+ QN +AL++
Sbjct: 118 RMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKALKL 177
Query: 143 F-RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYC 201
F R + + P+E T+ SV+S+ +LG + + +H +++ + ++ L++ Y
Sbjct: 178 FSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYA 237
Query: 202 VCSSLVEARSLFDEMKER--NIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMI 259
S+ AR + D+ E N++S+ +L G+ K G +E ARE+F + ++DVV+W MI
Sbjct: 238 KSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMI 297
Query: 260 DGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFD 319
GY Q R EA+ ++R+M+ G PN + ++S C G QIH +++ +
Sbjct: 298 VGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLE 357
Query: 320 CYDFIQATIIHFYAACGRINLARLQF-ELGIKDHIASWNALIAGFIRNGMIEDARQLFNN 378
+ II YA G AR F ++ + +W ++I ++G E+
Sbjct: 358 QSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEE------- 410
Query: 379 MQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG 438
A+ LF M+ AGV+P+ IT V V A + +G + EG
Sbjct: 411 ------------------------AVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEG 446
Query: 439 RWAHEYVLN-NSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGL 497
+ ++ + N + I + A ++D+ A+ G + A E + +++ W +++
Sbjct: 447 KRYYDQIKNEHQIAPEMSHYACMVDLLARAGLFSEAQEFIRRMPVEPDAIA-WGSLLSAC 505
Query: 498 AMHGDANL 505
+H +A L
Sbjct: 506 RVHKNAEL 513
>gi|356540339|ref|XP_003538647.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g22690-like [Glycine max]
Length = 836
Score = 362 bits (930), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 204/635 (32%), Positives = 336/635 (52%), Gaps = 64/635 (10%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
L CS +A+S+G Q+H + K GLE + F+ NSLI+ YA+CG
Sbjct: 137 LSACSKILALSEGVQVHGAVLKMGLEGDIFVSNSLIHFYAECG----------------- 179
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
+++ R++FD + VS+TS+I G++ D +EA+ +F M
Sbjct: 180 --------------KVDLGRKLFDGMLERNVVSWTSLINGYSGRDLSKEAVSLFFQMGEA 225
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
GV PN VT+ VIS+ L + + + + +L ++ I+ L++MY C
Sbjct: 226 GVEPNPVTMVCVISACAKLKDLELGKKVCSYISELGMELSTIMVNALVDMYMKC------ 279
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLS 269
G + AR++F+ +K++V + T++ Y+ E S
Sbjct: 280 -------------------------GDICAARQIFDECANKNLVMYNTIMSNYVHHEWAS 314
Query: 270 EALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATII 329
+ L + ML G P+ V ++ I+AC + G H+ +++ G + +D I II
Sbjct: 315 DVLVILDEMLQKGPRPDKVTMLSTIAACAQLGDLSVGKSSHAYVLRNGLEGWDNISNAII 374
Query: 330 HFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSA 389
Y CG+ A FE + +WN+LIAG +R+G +E A ++F+ M +RD+ SW+
Sbjct: 375 DMYMKCGKREAACKVFEHMPNKTVVTWNSLIAGLVRDGDMELAWRIFDEMLERDLVSWNT 434
Query: 390 MISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNS 449
MI Q A+ELF M + G+ + +TMV + A G L +W Y+ N
Sbjct: 435 MIGALVQVSMFEEAIELFREMQNQGIPGDRVTMVGIASACGYLGALDLAKWVCTYIEKND 494
Query: 450 ITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKI 509
I ++ L A++DM+++CG ++A VF + R VS W A I +AM G+ +++
Sbjct: 495 IHVDLQLGTALVDMFSRCGDPSSAMHVFKRMEKR--DVSAWTAAIGVMAMEGNTEGAIEL 552
Query: 510 YSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLG 569
++++ ++ +K + + F+ +L+ C H G VD G + F SM+ + + P + HYGCMVDLLG
Sbjct: 553 FNEMLEQKVKPDDVVFVALLTACSHGGSVDQGRQLFWSMEKAHGIRPHIVHYGCMVDLLG 612
Query: 570 RAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVL 629
RAG LE+A ++I+SMP++ + V+WG+LLAA R H NVE+ AA+ L L P VL
Sbjct: 613 RAGLLEEAVDLIQSMPIEPNDVVWGSLLAACRKHKNVELAHYAAEKLTQLAPERVGIHVL 672
Query: 630 LSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
LSNIYA AG+W D +R +M++ G++++PG S +
Sbjct: 673 LSNIYASAGKWTDVARVRLQMKEKGVQKVPGSSSI 707
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 148/604 (24%), Positives = 263/604 (43%), Gaps = 112/604 (18%)
Query: 48 LIFKSGLESNTFIQNSLINLYAKCGLISQAKSMF-----------DSCSTLDPVACNIMI 96
L+ S E+N +NS L C + + K + S L+ + + +
Sbjct: 12 LVPASLKEANPITRNSSSKLLVNCKTLKELKQLHCDMMKKGLLCHKPASNLNKLIASSVQ 71
Query: 97 SGYIRNDRLNDAREVF--DKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPN 154
G + + L+ AR F D + Y +I G+A +A+ ++ M ++G++P+
Sbjct: 72 IGTL--ESLDYARNAFGDDDGNMASLFMYNCLIRGYASAGLGDQAILLYVQMLVMGIVPD 129
Query: 155 EVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFD 214
+ T ++S+ + + E +HG V+K+ ++G + +S +L++ Y C + R LFD
Sbjct: 130 KYTFPFLLSACSKILALSEGVQVHGAVLKMGLEGDIFVSNSLIHFYAECGKVDLGRKLFD 189
Query: 215 EMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTM 274
M ERN+VSW ++NG++ R+L + EA+++
Sbjct: 190 GMLERNVVSWTSLINGYS-------GRDLSK------------------------EAVSL 218
Query: 275 YRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAA 334
+ M G+ PN V +V +ISAC + G ++ S I + G + + ++ Y
Sbjct: 219 FFQMGEAGVEPNPVTMVCVISACAKLKDLELGKKVCSYISELGMELSTIMVNALVDMYMK 278
Query: 335 CGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGY 394
CG I A RQ+F+ +++ ++ ++S Y
Sbjct: 279 CGDICAA-------------------------------RQIFDECANKNLVMYNTIMSNY 307
Query: 395 AQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLND 454
+E + L + M+ G +P+++TM+S A A G L G+ +H YVL N + D
Sbjct: 308 VHHEWASDVLVILDEMLQKGPRPDKVTMLSTIAACAQLGDLSVGKSSHAYVLRNGLEGWD 367
Query: 455 NLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLE 514
N+S AIIDMY KCG A +VF H+ ++T V WN++I GL GD L +I+ ++
Sbjct: 368 NISNAIIDMYMKCGKREAACKVFEHMPNKT--VVTWNSLIAGLVRDGDMELAWRIFDEML 425
Query: 515 KRN-------------------------------IKLNSITFIGVLSTCCHAGLVDLGER 543
+R+ I + +T +G+ S C + G +DL +
Sbjct: 426 ERDLVSWNTMIGALVQVSMFEEAIELFREMQNQGIPGDRVTMVGIASACGYLGALDLA-K 484
Query: 544 YFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIH 603
+ + ++ DL+ +VD+ R G A V + M K DV W + +
Sbjct: 485 WVCTYIEKNDIHVDLQLGTALVDMFSRCGDPSSAMHVFKRME-KRDVSAWTAAIGVMAME 543
Query: 604 GNVE 607
GN E
Sbjct: 544 GNTE 547
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 122/485 (25%), Positives = 224/485 (46%), Gaps = 68/485 (14%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+ +V + C+ + G+++ S I + G+E +T + N+L+++Y KCG I A+ +FD
Sbjct: 232 VTMVCVISACAKLKDLELGKKVCSYISELGMELSTIMVNALVDMYMKCGDICAARQIFDE 291
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
C+ + V N ++S Y+ ++ +D + D+ K
Sbjct: 292 CANKNLVMYNTIMSNYVHHEWASDVLVILDEMLQK------------------------- 326
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
G P++VT+ S I++ LG + + H V++ ++G+ IS +++MY C
Sbjct: 327 ------GPRPDKVTMLSTIAACAQLGDLSVGKSSHAYVLRNGLEGWDNISNAIIDMYMKC 380
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYL 263
A +F+ M + +V+WN ++ G + G +ELA +F+ + +D+VSW TMI +
Sbjct: 381 GKREAACKVFEHMPNKTVVTWNSLIAGLVRDGDMELAWRIFDEMLERDLVSWNTMIGALV 440
Query: 264 QVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDF 323
QV EA+ ++R M GI + V +V + SACG A A + C +
Sbjct: 441 QVSMFEEAIELFREMQNQGIPGDRVTMVGIASACGYLGALD----------LAKWVC-TY 489
Query: 324 IQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRD 383
I+ IH + +LG AL+ F R G A +F M+KRD
Sbjct: 490 IEKNDIH------------VDLQLG--------TALVDMFSRCGDPSSAMHVFKRMEKRD 529
Query: 384 VYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGR---W 440
V +W+A I A A+ELF+ M++ VKP+++ V++ A + G++ +GR W
Sbjct: 530 VSAWTAAIGVMAMEGNTEGAIELFNEMLEQKVKPDDVVFVALLTACSHGGSVDQGRQLFW 589
Query: 441 AHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMH 500
+ E + I + ++D+ + G + A ++ + V W +++ H
Sbjct: 590 SMEKA--HGIRPHIVHYGCMVDLLGRAGLLEEAVDLIQSMPIEPNDVV-WGSLLAACRKH 646
Query: 501 GDANL 505
+ L
Sbjct: 647 KNVEL 651
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 88/387 (22%), Positives = 168/387 (43%), Gaps = 72/387 (18%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
++ ++S + C+ +S G+ H+ + ++GLE I N++I++Y KCG A +F+
Sbjct: 332 KVTMLSTIAACAQLGDLSVGKSSHAYVLRNGLEGWDNISNAIIDMYMKCGKREAACKVFE 391
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
V N +I+G +R+ + A +FD+ + VS+ +MI Q + EA+E+
Sbjct: 392 HMPNKTVVTWNSLIAGLVRDGDMELAWRIFDEMLERDLVSWNTMIGALVQVSMFEEAIEL 451
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGI----WECRMLHGLVIKLMIDGFVIISTNLLN 198
FR+M+ G+ + VT+ + S+ +LG + W C + I + + + T L++
Sbjct: 452 FREMQNQGIPGDRVTMVGIASACGYLGALDLAKWVCTYIEKNDIHVDLQ----LGTALVD 507
Query: 199 MYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTM 258
M+ C A +F M++R++ +W + A G E A ELF
Sbjct: 508 MFSRCGDPSSAMHVFKRMEKRDVSAWTAAIGVMAMEGNTEGAIELFNE------------ 555
Query: 259 IDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGF 318
ML + P+DV+ V L++AC + +G Q+ + KA
Sbjct: 556 -------------------MLEQKVKPDDVVFVALLTACSHGGSVDQGRQLFWSMEKAH- 595
Query: 319 DCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNN 378
GI+ HI + ++ R G++E+A L +
Sbjct: 596 -----------------------------GIRPHIVHYGCMVDLLGRAGLLEEAVDLIQS 626
Query: 379 M--QKRDVYSWSAMISGYAQNEQPNMA 403
M + DV W ++++ +++ +A
Sbjct: 627 MPIEPNDVV-WGSLLAACRKHKNVELA 652
>gi|357440933|ref|XP_003590744.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479792|gb|AES60995.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 795
Score = 362 bits (930), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 229/665 (34%), Positives = 359/665 (53%), Gaps = 34/665 (5%)
Query: 29 ALRYCSA--HIAVSQ--GQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSC 84
A RY + H++ +Q + +H+ I SG + NTFI N LIN+Y K I+ A+ +FD
Sbjct: 7 AYRYLTQLNHVSTTQIIARAVHAHILTSGFKPNTFILNRLINIYCKSSNITYARKLFDKI 66
Query: 85 STLDPVACNIMISGYIRNDRLNDAREVFDKTP--IKCCVSYTSMIMGFAQNDCWREALEV 142
D VA ++S Y + + A+++F+ TP I+ VSY +MI ++ + AL +
Sbjct: 67 PKPDIVARTTLLSAYSSSGNVKLAQQLFNATPLTIRDTVSYNAMITAYSHGNDGHAALNL 126
Query: 143 FRDMRILGVIPNEVTLASVISS-SVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYC 201
F M+ G +P+ T +SV+S+ S+ C+MLH VIKL ++ LL+ Y
Sbjct: 127 FVQMKRYGFLPDPFTFSSVLSALSLIADEERHCQMLHCEVIKLGTLLIPSVTNALLSCYV 186
Query: 202 VCSS---------LVEARSLFDEMKERNIV--SWNVMLNGFAKAGLVELARELFERIPSK 250
C+S + AR +FDE + I SW M+ G+ + + AREL + +
Sbjct: 187 CCASSPLVKSSQLMASARKVFDETPKNQIYEPSWTTMIAGYVRNDDLVAARELLDGLTYP 246
Query: 251 DVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACG----RAMAFGEG 306
V+W MI GY++ EA +R M GI ++ LISACG + F G
Sbjct: 247 IDVAWNAMISGYVRRGLYEEAFDTFRRMHSMGIQEDEYTYTSLISACGSCNEKMGMFNCG 306
Query: 307 LQIHSIIVKAGFD-CYDFIQAT---IIHFYAACGRINLARLQFE-LGIKDHIASWNALIA 361
Q+H I++ + + F+ + +I FY R+ AR F+ + ++D I SWNA+++
Sbjct: 307 RQVHGYILRTVVEPSHHFVLSVNNALITFYTKYDRMIEARRVFDKMPVRD-IISWNAVLS 365
Query: 362 GFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEIT 421
G++ IE+A +F+ M +R+V +W+ MISG AQN L+LF+ M G++P +
Sbjct: 366 GYVNAQRIEEANSIFSEMPERNVLTWTVMISGLAQNGFGEEGLKLFNQMKSEGLEPCDYA 425
Query: 422 MVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSA--AIIDMYAKCGSINTAFEVFYH 479
A + G+L G+ H V+ + + LSA A+I MY++CG + +A VF
Sbjct: 426 FAGAITACSVLGSLDNGQQIHSQVIR--LGHDSGLSAGNALITMYSRCGVVESAESVFLT 483
Query: 480 IRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVD 539
+ SVS WNA+I LA HG ++++ + K +I + ITF+ +L+ C HAGL+
Sbjct: 484 M-PYVDSVS-WNAMIAALAQHGHGVKAIELFEQMMKEDILPDRITFLTILTACNHAGLIK 541
Query: 540 LGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAA 599
G YF +M + Y + P HY ++DLL RAG A+ VI+SMP +A IW LLA
Sbjct: 542 EGRHYFDTMCTRYGITPGEDHYARLIDLLCRAGMFLKAQSVIKSMPFEAGAPIWEALLAG 601
Query: 600 SRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLP 659
RIHGN+E+G +AA L L P + ++LSN+YA G+W++ +R MR+ G+K+ P
Sbjct: 602 CRIHGNMELGIQAADRLLELIPGQDGTYIILSNMYAALGQWDEVARVRLLMRERGVKKEP 661
Query: 660 GFSGV 664
G S V
Sbjct: 662 GCSWV 666
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 110/250 (44%), Gaps = 40/250 (16%)
Query: 9 VFNSQKAN-LQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINL 67
+FN K+ L+ DY A A+ CS ++ GQQIHS + + G +S N+LI +
Sbjct: 410 LFNQMKSEGLEPCDY--AFAGAITACSVLGSLDNGQQIHSQVIRLGHDSGLSAGNALITM 467
Query: 68 YAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMI 127
Y++CG++ A+S+F + +D V S+ +MI
Sbjct: 468 YSRCGVVESAESVFLTMPYVDSV-------------------------------SWNAMI 496
Query: 128 MGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECR-MLHGLVIKLMI 186
AQ+ +A+E+F M ++P+ +T +++++ H G I E R + + I
Sbjct: 497 AALAQHGHGVKAIELFEQMMKEDILPDRITFLTILTACNHAGLIKEGRHYFDTMCTRYGI 556
Query: 187 DGFVIISTNLLNMYCVCSSLVEARSLFDEMK-ERNIVSWNVMLNGFAKAGLVEL----AR 241
L+++ C ++A+S+ M E W +L G G +EL A
Sbjct: 557 TPGEDHYARLIDLLCRAGMFLKAQSVIKSMPFEAGAPIWEALLAGCRIHGNMELGIQAAD 616
Query: 242 ELFERIPSKD 251
L E IP +D
Sbjct: 617 RLLELIPGQD 626
>gi|357464699|ref|XP_003602631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491679|gb|AES72882.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 705
Score = 362 bits (928), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 210/640 (32%), Positives = 336/640 (52%), Gaps = 40/640 (6%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
L C +V + + +H+ I K+ S FIQN L+++Y KCG + A+ +FD +
Sbjct: 26 LDTCVKSKSVFEARLVHARIIKTQFSSEIFIQNRLVDVYGKCGFLEDARKVFDHMQQRNT 85
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
+ N ++ + L++A +F P + S+ +M+ GFAQ D + EAL DM
Sbjct: 86 FSWNAVLGALTKFGALDEALNLFKCMPERDQCSWNAMVSGFAQRDRFEEALRFVVDMHSE 145
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
+ NE + S +S+ L + +HGL+ K V + + L++MY C + A
Sbjct: 146 DFVLNEYSFGSALSACAGLMDLSIGVQIHGLIAKSRYSLDVYMGSALVDMYSKCRVVASA 205
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLS 269
+ FD+M RNI VSW ++I Y Q
Sbjct: 206 QRAFDDMDVRNI-------------------------------VSWNSLITCYEQNGPAG 234
Query: 270 EALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQAT-I 328
+AL ++ M+ GI P+++ + + SAC A EGLQIH+ ++K D + +
Sbjct: 235 KALEVFVRMMNCGIEPDEITLASVASACASLSAIREGLQIHARVMKHDKYRNDLVLGNAL 294
Query: 329 IHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWS 388
+ YA C R+N ARL F+ + S ++++G+ + ++ AR +F+NM +R+V SW+
Sbjct: 295 VDMYAKCRRVNEARLVFDRMPLRDVVSETSMVSGYAKASSVKAARLMFSNMMERNVVSWN 354
Query: 389 AMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNN 448
A+I+GY QN + A+ LF + + P T ++ A A+ LK GR AH ++L +
Sbjct: 355 ALIAGYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQAHTHILKH 414
Query: 449 SITLNDN------LSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGD 502
+ ++IDMY KCG + VF + +R WNA+I G A +G
Sbjct: 415 GFWFKSGEDSDIFVGNSLIDMYMKCGLVEDGRLVFERMLERDNV--SWNAMIVGYAQNGY 472
Query: 503 ANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYG 562
L+I+ ++ + + +T IGVLS C HAGLV+ G YF+SM + + P HY
Sbjct: 473 GTEALEIFREMLVSGERPDHVTMIGVLSACSHAGLVEEGRCYFQSMTIEHGLVPVKDHYT 532
Query: 563 CMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPS 622
CMVDLLGRAG L++A +I++MPM+ D V+WG+LLAA ++HGN+ +G+ A+ L + P
Sbjct: 533 CMVDLLGRAGCLDEANNLIQTMPMEPDAVVWGSLLAACKVHGNITLGKYVAERLLEIDPL 592
Query: 623 HGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
+ VLLSN+YA+ GRW+D +RK+MR G+ + PG S
Sbjct: 593 NSGPYVLLSNMYAELGRWKDVVRVRKQMRQMGVIKQPGCS 632
Score = 189 bits (480), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 138/502 (27%), Positives = 235/502 (46%), Gaps = 85/502 (16%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E + SAL C+ + +S G QIH LI KS + ++ ++L+++Y+KC +++ A+ FD
Sbjct: 151 EYSFGSALSACAGLMDLSIGVQIHGLIAKSRYSLDVYMGSALVDMYSKCRVVASAQRAFD 210
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+ V+ N +I+ Y QN +ALEV
Sbjct: 211 DMDVRNIVSWNSLITCY-------------------------------EQNGPAGKALEV 239
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGF---VIISTNLLNM 199
F M G+ P+E+TLASV S+ L I E +H V+K D + +++ L++M
Sbjct: 240 FVRMMNCGIEPDEITLASVASACASLSAIREGLQIHARVMKH--DKYRNDLVLGNALVDM 297
Query: 200 YCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMI 259
Y C + EAR +FD M R++VS M++G+AKA V+ AR +F + ++VVSW +I
Sbjct: 298 YAKCRRVNEARLVFDRMPLRDVVSETSMVSGYAKASSVKAARLMFSNMMERNVVSWNALI 357
Query: 260 DGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGF- 318
GY Q EA+ ++ + + I P +L++AC G Q H+ I+K GF
Sbjct: 358 AGYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQAHTHILKHGFW 417
Query: 319 -----DCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDAR 373
D F+ ++I Y CG + RL FE ++ SWNA+I G+ +NG +
Sbjct: 418 FKSGEDSDIFVGNSLIDMYMKCGLVEDGRLVFERMLERDNVSWNAMIVGYAQNGYGTE-- 475
Query: 374 QLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSG 433
ALE+F M+ +G +P+ +TM+ V A + +G
Sbjct: 476 -----------------------------ALEIFREMLVSGERPDHVTMIGVLSACSHAG 506
Query: 434 TLKEGR-WAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSP--- 489
++EGR + + + + + ++D+ + G ++ A + +T + P
Sbjct: 507 LVEEGRCYFQSMTIEHGLVPVKDHYTCMVDLLGRAGCLDEANNLI-----QTMPMEPDAV 561
Query: 490 -WNAIICGLAMHGDANLTLKIY 510
W +++ +HG N+TL Y
Sbjct: 562 VWGSLLAACKVHG--NITLGKY 581
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 138/525 (26%), Positives = 232/525 (44%), Gaps = 83/525 (15%)
Query: 141 EVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMY 200
+V D+ L P A ++ + V ++E R++H +IK + I L+++Y
Sbjct: 9 KVVGDLSFLDSSP----FAKLLDTCVKSKSVFEARLVHARIIKTQFSSEIFIQNRLVDVY 64
Query: 201 CVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMID 260
C L +AR +FD M++RN SWN +L K G ++ A LF+ +P +D SW M+
Sbjct: 65 GKCGFLEDARKVFDHMQQRNTFSWNAVLGALTKFGALDEALNLFKCMPERDQCSWNAMVS 124
Query: 261 GYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDC 320
G+ Q +R EAL M + N+ +SAC M G+QIH +I K+ +
Sbjct: 125 GFAQRDRFEEALRFVVDMHSEDFVLNEYSFGSALSACAGLMDLSIGVQIHGLIAKSRYSL 184
Query: 321 YDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ 380
++ + ++ Y+ C + A+ F+ +I SWN+L
Sbjct: 185 DVYMGSALVDMYSKCRVVASAQRAFDDMDVRNIVSWNSL--------------------- 223
Query: 381 KRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRW 440
I+ Y QN ALE+F M++ G++P+EIT+ SV A AS ++EG
Sbjct: 224 ----------ITCYEQNGPAGKALEVFVRMMNCGIEPDEITLASVASACASLSAIREGLQ 273
Query: 441 AHEYVLNNSITLND-NLSAAIIDMYAKCGSINTAFEVF--YHIRDRTTSVS--------- 488
H V+ + ND L A++DMYAKC +N A VF +RD + S
Sbjct: 274 IHARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRDVVSETSMVSGYAKAS 333
Query: 489 ------------------PWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLS 530
WNA+I G +G+ ++++ L++ +I TF +L+
Sbjct: 334 SVKAARLMFSNMMERNVVSWNALIAGYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLN 393
Query: 531 TCCHAGLVDLGER----------YFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEV 580
C + + LG + +FKS + + D+ ++D+ + G +ED V
Sbjct: 394 ACANLADLKLGRQAHTHILKHGFWFKSGE-----DSDIFVGNSLIDMYMKCGLVEDGRLV 448
Query: 581 IRSMPMKADVVIWGTLLAASRIHG-NVEVGERAAKSL-AGLQPSH 623
M ++ D V W ++ +G E E + L +G +P H
Sbjct: 449 FERM-LERDNVSWNAMIVGYAQNGYGTEALEIFREMLVSGERPDH 492
>gi|347954516|gb|AEP33758.1| organelle transcript processing 82, partial [Barbarea verna]
Length = 710
Score = 361 bits (927), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 204/565 (36%), Positives = 312/565 (55%), Gaps = 37/565 (6%)
Query: 103 DRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVI 162
D L A VF+ + + +M G A + A++++ M LG++PN T ++
Sbjct: 51 DGLPYAISVFETIQEPNLLIWNTMFRGHALSSDPVSAIKLYVCMISLGLLPNSYTFPFLL 110
Query: 163 SSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIV 222
S L E + +HG V+KL + + + T+L++MY +A +FD R++V
Sbjct: 111 KSCAKLKVSKEGQQIHGHVLKLGYELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHRDVV 170
Query: 223 SWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDG 282
S+ ++ G+A G +E A+++F+ IP KDVVSW +I GY EAL +++ M+
Sbjct: 171 SYTALITGYASRGYIESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKTN 230
Query: 283 IAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLAR 342
+ P++ +V ++SAC ++ + G Q+HS I G I +I Y+ CG + A
Sbjct: 231 VKPDESTMVTVVSACAQSGSIQLGRQVHSWIDDHGLGSNLKIVNALIDLYSKCGEVETAC 290
Query: 343 LQFE-LGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPN 401
F+ L KD + SWN +I G+ + ++
Sbjct: 291 GLFQGLSNKD-VISWNTMIGGYTHLNLYKE------------------------------ 319
Query: 402 MALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLN--NSITLNDNLSAA 459
AL LF M+ +G PN++TM+S+ A A G + GRW H Y+ +T +L +
Sbjct: 320 -ALLLFQEMLRSGENPNDVTMLSILPACAQLGAIDFGRWIHVYIDKRIKGVTNASSLRTS 378
Query: 460 IIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIK 519
+IDMYAKCG I A +VF + RT +S NA+I G AMHG AN I+S + K I+
Sbjct: 379 LIDMYAKCGDIEAAHQVFNSMHHRT--LSACNAMIFGFAMHGRANAAFDIFSRMRKNGIE 436
Query: 520 LNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEE 579
+ ITF+G+LS C H+G++DLG R F+SM Y + P L+HYGCM+DLLG G ++AEE
Sbjct: 437 PDDITFVGLLSACSHSGMLDLGRRIFRSMTQNYKITPKLEHYGCMIDLLGHLGLFKEAEE 496
Query: 580 VIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGR 639
+I +M M+ D VIW +LL A ++HGNVE+GE A+ L ++P + S VLLSNIYA AGR
Sbjct: 497 MINTMTMEPDGVIWCSLLKACKMHGNVELGESFAQKLIKIEPENPGSYVLLSNIYATAGR 556
Query: 640 WEDAFSIRKEMRDCGMKRLPGFSGV 664
W + +IR + D GMK++PG S +
Sbjct: 557 WNEVANIRALLNDKGMKKVPGCSSI 581
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 133/483 (27%), Positives = 215/483 (44%), Gaps = 74/483 (15%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
L+ C+ +GQQIH + K G E + ++ SLI++Y K G A +FD S D
Sbjct: 110 LKSCAKLKVSKEGQQIHGHVLKLGYELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHRDV 169
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
V+ +I+GY + A+++FD+ P+K VS+ ++I G+A +EAL++F++M
Sbjct: 170 VSYTALITGYASRGYIESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKT 229
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
V P+E T+ +V+S+ G I R +H + + + I L+++Y C + A
Sbjct: 230 NVKPDESTMVTVVSACAQSGSIQLGRQVHSWIDDHGLGSNLKIVNALIDLYSKCGEVETA 289
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLS 269
LF + ++++SWN M I GY +
Sbjct: 290 CGLFQGLSNKDVISWNTM-------------------------------IGGYTHLNLYK 318
Query: 270 EALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVK--AGFDCYDFIQAT 327
EAL +++ ML G PNDV ++ ++ AC + A G IH I K G ++ +
Sbjct: 319 EALLLFQEMLRSGENPNDVTMLSILPACAQLGAIDFGRWIHVYIDKRIKGVTNASSLRTS 378
Query: 328 IIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSW 387
+I YA CG I E A Q+FN+M R + +
Sbjct: 379 LIDMYAKCGDI-------------------------------EAAHQVFNSMHHRTLSAC 407
Query: 388 SAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLN 447
+AMI G+A + + N A ++F M G++P++IT V + A + SG L GR +
Sbjct: 408 NAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRRIFRSMTQ 467
Query: 448 N-SITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGL----AMHGD 502
N IT +ID+ G A E+ T ++ P I C L MHG+
Sbjct: 468 NYKITPKLEHYGCMIDLLGHLGLFKEAEEMI-----NTMTMEPDGVIWCSLLKACKMHGN 522
Query: 503 ANL 505
L
Sbjct: 523 VEL 525
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 125/290 (43%), Gaps = 66/290 (22%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E +V+ + C+ ++ G+Q+HS I GL SN I N+LI+LY+KCG + A +F
Sbjct: 235 ESTMVTVVSACAQSGSIQLGRQVHSWIDDHGLGSNLKIVNALIDLYSKCGEVETACGLFQ 294
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
S D ++ N MI GY + ++EAL +
Sbjct: 295 GLSNKDVISWNTMIGGY-------------------------------THLNLYKEALLL 323
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIIS---TNLLNM 199
F++M G PN+VT+ S++ + LG I R +H + I I G S T+L++M
Sbjct: 324 FQEMLRSGENPNDVTMLSILPACAQLGAIDFGRWIH-VYIDKRIKGVTNASSLRTSLIDM 382
Query: 200 YCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMI 259
Y C + A +F+ M R + + N M+ GFA G A ++F R
Sbjct: 383 YAKCGDIEAAHQVFNSMHHRTLSACNAMIFGFAMHGRANAAFDIFSR------------- 429
Query: 260 DGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQI 309
M +GI P+D+ V L+SAC + G +I
Sbjct: 430 ------------------MRKNGIEPDDITFVGLLSACSHSGMLDLGRRI 461
>gi|356511265|ref|XP_003524347.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 750
Score = 361 bits (926), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 211/616 (34%), Positives = 324/616 (52%), Gaps = 49/616 (7%)
Query: 49 IFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDA 108
+F + N+ N++I+ Y + S A+ +FD D + N+M++GY RN RL DA
Sbjct: 55 VFDAMPLRNSVSYNAMISGYLRNAKFSLARDLFDKMPHKDLFSWNLMLTGYARNRRLRDA 114
Query: 109 REVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHL 168
R +FD P K VS+ +M+ G+ ++ EA +VF M N ++ ++++ V
Sbjct: 115 RMLFDSMPEKDVVSWNAMLSGYVRSGHVDEARDVFDRM----PHKNSISWNGLLAAYVRS 170
Query: 169 GGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVML 228
G + E R L + D +I L+ Y + L +AR LFD++ R+++SWN M+
Sbjct: 171 GRLEEARRL----FESKSDWELISCNCLMGGYVKRNMLGDARQLFDQIPVRDLISWNTMI 226
Query: 229 NGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDV 288
+G+A+ G + AR LFE P +DV +W M+ Y+Q L EA ++ M P
Sbjct: 227 SGYAQDGDLSQARRLFEESPVRDVFTWTAMVYAYVQDGMLDEARRVFDEM------PQK- 279
Query: 289 MIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELG 348
R M++ +I YA R+++ R FE
Sbjct: 280 ----------REMSYN----------------------VMIAGYAQYKRMDMGRELFEEM 307
Query: 349 IKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFH 408
+I SWN +I+G+ +NG + AR LF+ M +RD SW+A+I+GYAQN A+ +
Sbjct: 308 PFPNIGSWNIMISGYCQNGDLAQARNLFDMMPQRDSVSWAAIIAGYAQNGLYEEAMNMLV 367
Query: 409 GMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCG 468
M G N T A A L+ G+ H V+ + A++ MY KCG
Sbjct: 368 EMKRDGESLNRSTFCCALSACADIAALELGKQVHGQVVRTGYEKGCLVGNALVGMYCKCG 427
Query: 469 SINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGV 528
I+ A++VF ++ + + WN ++ G A HG L ++ + +K + IT +GV
Sbjct: 428 CIDEAYDVFQGVQHK--DIVSWNTMLAGYARHGFGRQALTVFESMITAGVKPDEITMVGV 485
Query: 529 LSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKA 588
LS C H GL D G YF SM Y + P+ KHY CM+DLLGRAG LE+A+ +IR+MP +
Sbjct: 486 LSACSHTGLTDRGTEYFHSMNKDYGITPNSKHYACMIDLLGRAGCLEEAQNLIRNMPFEP 545
Query: 589 DVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRK 648
D WG LL ASRIHGN+E+GE+AA+ + ++P + VLLSN+YA +GRW D +R
Sbjct: 546 DAATWGALLGASRIHGNMELGEQAAEMVFKMEPHNSGMYVLLSNLYAASGRWVDVSKMRL 605
Query: 649 EMRDCGMKRLPGFSGV 664
+MR G+++ PG+S V
Sbjct: 606 KMRQIGVQKTPGYSWV 621
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 125/447 (27%), Positives = 209/447 (46%), Gaps = 62/447 (13%)
Query: 192 ISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKD 251
IST++ N +C + V FD M RN VS+N M++G+ + LAR+LF+++P KD
Sbjct: 40 ISTHMRNGHCDLALCV-----FDAMPLRNSVSYNAMISGYLRNAKFSLARDLFDKMPHKD 94
Query: 252 VVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVD-LISACGRAMAFGEGLQIH 310
+ SW M+ GY + RL +A ML D + DV+ + ++S R+ E +
Sbjct: 95 LFSWNLMLTGYARNRRLRDA-----RMLFDSMPEKDVVSWNAMLSGYVRSGHVDEARDVF 149
Query: 311 SIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIE 370
+ ++ + A Y GR+ AR FE + S N L+ G+++ M+
Sbjct: 150 DRMPHKNSISWNGLLAA----YVRSGRLEEARRLFESKSDWELISCNCLMGGYVKRNMLG 205
Query: 371 DARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIA 430
DARQLF+ + RD+ SW+ MISGYAQ+ + A LF ++ V+ + T ++ A
Sbjct: 206 DARQLFDQIPVRDLISWNTMISGYAQDGDLSQARRLFE---ESPVR-DVFTWTAMVYAYV 261
Query: 431 SSGTLKEGR--------------------WAHEYVLNNSITLNDNLSAA-------IIDM 463
G L E R +A ++ L + + +I
Sbjct: 262 QDGMLDEARRVFDEMPQKREMSYNVMIAGYAQYKRMDMGRELFEEMPFPNIGSWNIMISG 321
Query: 464 YAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSI 523
Y + G + A +F + R SVS W AII G A +G + + ++++ LN
Sbjct: 322 YCQNGDLAQARNLFDMMPQR-DSVS-WAAIIAGYAQNGLYEEAMNMLVEMKRDGESLNRS 379
Query: 524 TFIGVLSTCCHAGLVDLGER-YFKSMKSVYNVEPDLKHYGCMVD--LLG---RAGQLEDA 577
TF LS C ++LG++ + + +++ Y GC+V L+G + G +++A
Sbjct: 380 TFCCALSACADIAALELGKQVHGQVVRTGYEK-------GCLVGNALVGMYCKCGCIDEA 432
Query: 578 EEVIRSMPMKADVVIWGTLLAASRIHG 604
+V + + K D+V W T+LA HG
Sbjct: 433 YDVFQGVQHK-DIVSWNTMLAGYARHG 458
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 92/221 (41%), Gaps = 33/221 (14%)
Query: 29 ALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLD 88
AL C+ A+ G+Q+H + ++G E + N+L+ +Y KCG I +A +F D
Sbjct: 384 ALSACADIAALELGKQVHGQVVRTGYEKGCLVGNALVGMYCKCGCIDEAYDVFQGVQHKD 443
Query: 89 PVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRI 148
V+ N M++GY R+ GF R+AL VF M
Sbjct: 444 IVSWNTMLAGYARH--------------------------GFG-----RQALTVFESMIT 472
Query: 149 LGVIPNEVTLASVISSSVHLGGIWE-CRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLV 207
GV P+E+T+ V+S+ H G H + I ++++ L
Sbjct: 473 AGVKPDEITMVGVLSACSHTGLTDRGTEYFHSMNKDYGITPNSKHYACMIDLLGRAGCLE 532
Query: 208 EARSLFDEMK-ERNIVSWNVMLNGFAKAGLVELARELFERI 247
EA++L M E + +W +L G +EL + E +
Sbjct: 533 EAQNLIRNMPFEPDAATWGALLGASRIHGNMELGEQAAEMV 573
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 74/371 (19%), Positives = 144/371 (38%), Gaps = 74/371 (19%)
Query: 339 NLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNE 398
N + FE H I+ +RNG + A +F+ M R+ S++AMISGY +N
Sbjct: 22 NYPKPHFE---DPHTVKCTKAISTHMRNGHCDLALCVFDAMPLRNSVSYNAMISGYLRNA 78
Query: 399 QPNMALELFHGM---------------------------VDAGVKPNEITMVSVFCAIAS 431
+ ++A +LF M D+ + + ++ ++
Sbjct: 79 KFSLARDLFDKMPHKDLFSWNLMLTGYARNRRLRDARMLFDSMPEKDVVSWNAMLSGYVR 138
Query: 432 SGTLKEGRWAHEYVLN-NSITLNDNLSAAI--------------------------IDMY 464
SG + E R + + + NSI+ N L+A + + Y
Sbjct: 139 SGHVDEARDVFDRMPHKNSISWNGLLAAYVRSGRLEEARRLFESKSDWELISCNCLMGGY 198
Query: 465 AKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSIT 524
K + A ++F I R + WN +I G A GD + +++ + R++ T
Sbjct: 199 VKRNMLGDARQLFDQIPVR--DLISWNTMISGYAQDGDLSQARRLFEESPVRDV----FT 252
Query: 525 FIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSM 584
+ ++ G++D R F M + Y M+ + +++ E+ M
Sbjct: 253 WTAMVYAYVQDGMLDEARRVFDEMPQKREMS-----YNVMIAGYAQYKRMDMGRELFEEM 307
Query: 585 PMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGP-SRVLLSNIYADAGRWEDA 643
P ++ W +++ +G++ A++L + P S + YA G +E+A
Sbjct: 308 PF-PNIGSWNIMISGYCQNGDLA----QARNLFDMMPQRDSVSWAAIIAGYAQNGLYEEA 362
Query: 644 FSIRKEMRDCG 654
++ EM+ G
Sbjct: 363 MNMLVEMKRDG 373
>gi|347954540|gb|AEP33770.1| organelle transcript processing 82, partial [Raphanus sativus]
Length = 675
Score = 361 bits (926), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 207/569 (36%), Positives = 310/569 (54%), Gaps = 41/569 (7%)
Query: 103 DRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVI 162
D L A VF+ + + +M+ G A + ALE++ M LG +PN + ++
Sbjct: 12 DGLPYAISVFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFLL 71
Query: 163 SSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIV 222
S E R +H V+KL + T+L++MY L +AR +FD R++V
Sbjct: 72 KSCAKSKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDVV 131
Query: 223 SWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDG 282
S ++ G+A G AR++F+ I +DVVSW MI GY++ R EAL +++ M+
Sbjct: 132 SCTALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRTN 191
Query: 283 IAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKA----GFDCYDFIQATIIHFYAACGRI 338
+ P++ +V ++SAC ++ + G Q+HS + GF I +I Y+ CG +
Sbjct: 192 VRPDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDV 251
Query: 339 NLARLQFE-LGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQN 397
A FE L KD + SWN LI G+ + ++
Sbjct: 252 ETAFGLFEGLSCKD-VVSWNTLIGGYTHTNLYKE-------------------------- 284
Query: 398 EQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLN--NSITLNDN 455
AL LF M+ +G PN++T++SV A A G + GRW H Y+ +T +
Sbjct: 285 -----ALLLFQEMLRSGECPNDVTLLSVLPACAHLGAIDIGRWIHVYIDKKLKGVTNETS 339
Query: 456 LSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEK 515
L ++IDMYAKCG I A +VF + R S+S WNA+I G AMHG AN ++S +
Sbjct: 340 LRTSLIDMYAKCGDIEAAHQVFNSMLYR--SLSSWNAMIFGFAMHGRANAAFDLFSRMRG 397
Query: 516 RNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLE 575
++ + ITF+G+LS C H+GL+DLG + FKSM YN+ P L+HYGCM+DLLG +G +
Sbjct: 398 NRVEPDDITFVGLLSACSHSGLLDLGRQIFKSMTQDYNLTPKLEHYGCMIDLLGHSGLFK 457
Query: 576 DAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYA 635
+AEE+I +MPM+ D VIW +LL A + HGN+E+ E A+ L ++P + S VLLSNIYA
Sbjct: 458 EAEEMIHTMPMEPDGVIWCSLLKACKKHGNLELAESFAQKLIKIEPENSGSYVLLSNIYA 517
Query: 636 DAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
AGRWED +R + GMK++PG S +
Sbjct: 518 TAGRWEDVARVRGVLNGKGMKKVPGCSSI 546
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 138/504 (27%), Positives = 224/504 (44%), Gaps = 84/504 (16%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
L+ C+ A +G+QIH+ + K G + ++ SLI++YA+ G + A+ +FD+ S D
Sbjct: 71 LKSCAKSKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDV 130
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
V+C +I+GY AR+VFD+ + VS+ +MI G+ +N + EALE+F++M
Sbjct: 131 VSCTALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRT 190
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLV-IKLMIDGF---VIISTNLLNMYCVCSS 205
V P+E TL SV+S+ G I R +H V GF + I L+++Y C
Sbjct: 191 NVRPDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGD 250
Query: 206 LVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQV 265
+ A LF+ + +++VSWN ++ G+ L +
Sbjct: 251 VETAFGLFEGLSCKDVVSWNTLIGGYTHTNLYK--------------------------- 283
Query: 266 ERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVK--AGFDCYDF 323
EAL +++ ML G PNDV ++ ++ AC A G IH I K G
Sbjct: 284 ----EALLLFQEMLRSGECPNDVTLLSVLPACAHLGAIDIGRWIHVYIDKKLKGVTNETS 339
Query: 324 IQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRD 383
++ ++I YA CG I A F + ++SWNA+I GF +G
Sbjct: 340 LRTSLIDMYAKCGDIEAAHQVFNSMLYRSLSSWNAMIFGFAMHG---------------- 383
Query: 384 VYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHE 443
+ N A +LF M V+P++IT V + A + SG L GR
Sbjct: 384 ---------------RANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGLLDLGRQ--- 425
Query: 444 YVLNNSITLNDNLSAAI------IDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGL 497
+ S+T + NL+ + ID+ G A E+ + T + P I C L
Sbjct: 426 --IFKSMTQDYNLTPKLEHYGCMIDLLGHSGLFKEAEEMIH-----TMPMEPDGVIWCSL 478
Query: 498 AMHGDANLTLKIYSDLEKRNIKLN 521
+ L++ ++ IK+
Sbjct: 479 LKACKKHGNLELAESFAQKLIKIE 502
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 127/293 (43%), Gaps = 68/293 (23%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKS----GLESNTFIQNSLINLYAKCGLISQAK 78
E LVS + C+ ++ G+Q+HS + G S+ I N+LI+LY+KCG + A
Sbjct: 196 EGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDVETAF 255
Query: 79 SMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWRE 138
+F+ S D V+ N +I GY + ++E
Sbjct: 256 GLFEGLSCKDVVSWNTLIGGY-------------------------------THTNLYKE 284
Query: 139 ALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLM--IDGFVIISTNL 196
AL +F++M G PN+VTL SV+ + HLG I R +H + K + + + T+L
Sbjct: 285 ALLLFQEMLRSGECPNDVTLLSVLPACAHLGAIDIGRWIHVYIDKKLKGVTNETSLRTSL 344
Query: 197 LNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWG 256
++MY C + A +F+ M R++ SWN M+ GFA G A +LF R
Sbjct: 345 IDMYAKCGDIEAAHQVFNSMLYRSLSSWNAMIFGFAMHGRANAAFDLFSR---------- 394
Query: 257 TMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQI 309
M + + P+D+ V L+SAC + G QI
Sbjct: 395 ---------------------MRGNRVEPDDITFVGLLSACSHSGLLDLGRQI 426
>gi|356503240|ref|XP_003520419.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 801
Score = 361 bits (926), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 207/655 (31%), Positives = 330/655 (50%), Gaps = 100/655 (15%)
Query: 15 ANLQNSDYEL---ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKC 71
A ++ +D E+ + S L+ C + GQ++H + K+G + F+ N+LI +Y++
Sbjct: 113 AYMRGTDTEVDNFVIPSVLKACCLIPSFLLGQEVHGFVVKNGFHGDVFVCNALIMMYSEV 172
Query: 72 GLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFA 131
G ++ A R +FDK K VS+++MI +
Sbjct: 173 GSLALA-------------------------------RLLFDKIENKDVVSWSTMIRSYD 201
Query: 132 QNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGF-- 189
++ EAL++ RDM ++ V P+E+ + S+ L + + +H V++ G
Sbjct: 202 RSGLLDEALDLLRDMHVMRVKPSEIGMISITHVLAELADLKLGKAMHAYVMRNGKCGKSG 261
Query: 190 VIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPS 249
V + T L++MY C +L AR +FD G +KA
Sbjct: 262 VPLCTALIDMYVKCENLAYARRVFD---------------GLSKAS-------------- 292
Query: 250 KDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQI 309
++SW MI Y+ L+E + ++ ML +G+ PN++ ++ L+ CG A A G +
Sbjct: 293 --IISWTAMIAAYIHCNNLNEGVRLFVKMLGEGMFPNEITMLSLVKECGTAGALELGKLL 350
Query: 310 HSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMI 369
H+ ++ GF + I Y CG +
Sbjct: 351 HAFTLRNGFTLSLVLATAFIDMYGKCGDV------------------------------- 379
Query: 370 EDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAI 429
AR +F++ + +D+ WSAMIS YAQN + A ++F M G++PNE TMVS+
Sbjct: 380 RSARSVFDSFKSKDLMMWSAMISSYAQNNCIDEAFDIFVHMTGCGIRPNERTMVSLLMIC 439
Query: 430 ASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSP 489
A +G+L+ G+W H Y+ I + L + +DMYA CG I+TA +F DR +S
Sbjct: 440 AKAGSLEMGKWIHSYIDKQGIKGDMILKTSFVDMYANCGDIDTAHRLFAEATDR--DISM 497
Query: 490 WNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMK 549
WNA+I G AMHG L+++ ++E + N ITFIG L C H+GL+ G+R F M
Sbjct: 498 WNAMISGFAMHGHGEAALELFEEMEALGVTPNDITFIGALHACSHSGLLQEGKRLFHKMV 557
Query: 550 SVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVG 609
+ P ++HYGCMVDLLGRAG L++A E+I+SMPM+ ++ ++G+ LAA ++H N+++G
Sbjct: 558 HEFGFTPKVEHYGCMVDLLGRAGLLDEAHELIKSMPMRPNIAVFGSFLAACKLHKNIKLG 617
Query: 610 ERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
E AAK L+P VL+SNIYA A RW D IR+ M+D G+ + PG S +
Sbjct: 618 EWAAKQFLSLEPHKSGYNVLMSNIYASANRWGDVAYIRRAMKDEGIVKEPGVSSI 672
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 120/503 (23%), Positives = 219/503 (43%), Gaps = 71/503 (14%)
Query: 114 KTPIKCCVSYTS-------MIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSV 166
+ P+ SY+S +I + +N+C +A +++ MR + + SV+ +
Sbjct: 76 RVPLAALESYSSNAAIHSFLITSYIKNNCPADAAKIYAYMRGTDTEVDNFVIPSVLKACC 135
Query: 167 HLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNV 226
+ + +HG V+K G V + L+ MY
Sbjct: 136 LIPSFLLGQEVHGFVVKNGFHGDVFVCNALIMMY-------------------------- 169
Query: 227 MLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPN 286
++ G + LAR LF++I +KDVVSW TMI Y + L EAL + R M + P+
Sbjct: 170 -----SEVGSLALARLLFDKIENKDVVSWSTMIRSYDRSGLLDEALDLLRDMHVMRVKPS 224
Query: 287 DVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFE 346
++ ++ + G +H+ +++ G CG
Sbjct: 225 EIGMISITHVLAELADLKLGKAMHAYVMRNG----------------KCG---------- 258
Query: 347 LGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALEL 406
K + ALI +++ + AR++F+ + K + SW+AMI+ Y N + L
Sbjct: 259 ---KSGVPLCTALIDMYVKCENLAYARRVFDGLSKASIISWTAMIAAYIHCNNLNEGVRL 315
Query: 407 FHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAK 466
F M+ G+ PNEITM+S+ ++G L+ G+ H + L N TL+ L+ A IDMY K
Sbjct: 316 FVKMLGEGMFPNEITMLSLVKECGTAGALELGKLLHAFTLRNGFTLSLVLATAFIDMYGK 375
Query: 467 CGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFI 526
CG + +A VF + + + W+A+I A + + I+ + I+ N T +
Sbjct: 376 CGDVRSARSVFDSFKSKDLMM--WSAMISSYAQNNCIDEAFDIFVHMTGCGIRPNERTMV 433
Query: 527 GVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPM 586
+L C AG +++G ++ S ++ D+ VD+ G ++ A +
Sbjct: 434 SLLMICAKAGSLEMG-KWIHSYIDKQGIKGDMILKTSFVDMYANCGDIDTAHRLFAEATD 492
Query: 587 KADVVIWGTLLAASRIHGNVEVG 609
+ D+ +W +++ +HG+ E
Sbjct: 493 R-DISMWNAMISGFAMHGHGEAA 514
>gi|195647336|gb|ACG43136.1| pentatricopeptide repeat protein PPR868-14 [Zea mays]
Length = 788
Score = 360 bits (925), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 202/608 (33%), Positives = 334/608 (54%), Gaps = 4/608 (0%)
Query: 56 SNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKT 115
+++F + +++ + K G I+ A+ +F V+ M+ ++ + DA E++++
Sbjct: 147 ASSFTYDFMVSEHVKAGDIASARRLFYGMPEKSVVSYTTMVDALMKRGSVRDAVELYERC 206
Query: 116 PIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECR 175
P+ +T+MI GF +N+ ++A VFR M V PN VTL VI + V G
Sbjct: 207 PLHSVAFFTAMISGFVRNELHKDAFPVFRKMLTCSVRPNVVTLICVIKACVGAGEFDLAM 266
Query: 176 MLHGLVIKL-MIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKA 234
+ GL +K + + + + +L+ +Y A +FD+M+ R++VSW +L+ +A
Sbjct: 267 GVVGLAVKCNLFEKSIEVHNSLITLYLRMGDAAAAHRVFDDMEVRDVVSWTALLDVYADL 326
Query: 235 GLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLI 294
G + AR + + +P+++ VSWGT+I + Q +EAL +Y ML DG PN ++
Sbjct: 327 GDLYGARRVLDAMPARNEVSWGTLIARHEQKGDTAEALKLYSQMLADGCRPNISCFSSVL 386
Query: 295 SACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIA 354
SAC G +IH+ +K G F+ +++I Y C + A+ F + +
Sbjct: 387 SACATLQDLRGGTRIHANALKMGSSTNLFVSSSLIDMYCKCKQCTYAQRVFNSLPEKNTV 446
Query: 355 SWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAG 414
WN+LI+G+ NG + +A LFN M R+ SW+ MISGYA+N + AL F+ M+ +G
Sbjct: 447 CWNSLISGYSWNGKMVEAEGLFNKMPARNSVSWNTMISGYAENRRFGDALNYFYAMLASG 506
Query: 415 VKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAF 474
P EIT+ SV A A+ +L+ GR H ++ I N + A+ DMYAK G ++++
Sbjct: 507 HIPGEITLSSVLLACANLCSLEMGRMVHAEIVKLGIEDNIFMGTALSDMYAKSGDLDSSR 566
Query: 475 EVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCH 534
VFY + ++ W A++ GLA +G A ++ ++ D+ + I N TF+ +L C H
Sbjct: 567 RVFYQMPEKNNIT--WTAMVQGLAENGFAEESISLFEDMIENGIAPNEHTFLAILFACSH 624
Query: 535 AGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWG 594
GLV+ YF++M++ + + P KHY CMVD+L RAG L +AEE++ + + D W
Sbjct: 625 CGLVEQAIHYFETMQA-HGIPPKSKHYTCMVDVLARAGCLPEAEELLMKVSSELDTSSWS 683
Query: 595 TLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCG 654
+LL+A + N E+GERAAK L L+ + VLLSN+YA G+W+DA R M+
Sbjct: 684 SLLSACSTYRNKEIGERAAKKLHELEKDNTAGYVLLSNMYASCGKWKDAAETRILMQGAS 743
Query: 655 MKRLPGFS 662
+K+ G S
Sbjct: 744 LKKDAGCS 751
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 118/468 (25%), Positives = 218/468 (46%), Gaps = 37/468 (7%)
Query: 54 LESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFD 113
E + + NSLI LY + G + A +FD D V+ ++ Y L AR V D
Sbjct: 278 FEKSIEVHNSLITLYLRMGDAAAAHRVFDDMEVRDVVSWTALLDVYADLGDLYGARRVLD 337
Query: 114 KTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWE 173
P + VS+ ++I Q EAL+++ M G PN +SV+S+ L +
Sbjct: 338 AMPARNEVSWGTLIARHEQKGDTAEALKLYSQMLADGCRPNISCFSSVLSACATLQDLRG 397
Query: 174 CRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAK 233
+H +K+ + +S++L++MYC C A+ +F+ + E+N V WN +++G++
Sbjct: 398 GTRIHANALKMGSSTNLFVSSSLIDMYCKCKQCTYAQRVFNSLPEKNTVCWNSLISGYSW 457
Query: 234 AGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDL 293
G + A LF ++P+++ VSW TMI GY + R +AL + AML G P ++ + +
Sbjct: 458 NGKMVEAEGLFNKMPARNSVSWNTMISGYAENRRFGDALNYFYAMLASGHIPGEITLSSV 517
Query: 294 ISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQF-ELGIKDH 352
+ AC + G +H+ IVK G + F+ + YA G ++ +R F ++ K++
Sbjct: 518 LLACANLCSLEMGRMVHAEIVKLGIEDNIFMGTALSDMYAKSGDLDSSRRVFYQMPEKNN 577
Query: 353 IASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVD 412
I +W A++ G NG E+ ++ LF M++
Sbjct: 578 I-TWTAMVQGLAENGFAEE-------------------------------SISLFEDMIE 605
Query: 413 AGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINT 472
G+ PNE T +++ A + G +++ E + + I ++D+ A+ G +
Sbjct: 606 NGIAPNEHTFLAILFACSHCGLVEQAIHYFETMQAHGIPPKSKHYTCMVDVLARAGCLPE 665
Query: 473 AFEVFYHIRDRTTSVSPWNAIICGLAMHGDANL---TLKIYSDLEKRN 517
A E+ + + S W++++ + + + + K +LEK N
Sbjct: 666 AEELLMKVSSELDT-SSWSSLLSACSTYRNKEIGERAAKKLHELEKDN 712
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 115/285 (40%), Gaps = 75/285 (26%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E+ L S L C+ ++ G+ +H+ I K G+E N F+ +L ++YAK G
Sbjct: 511 EITLSSVLLACANLCSLEMGRMVHAEIVKLGIEDNIFMGTALSDMYAKSG---------- 560
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
L+ +R VF + P K +++T+M+ G A+N E++ +
Sbjct: 561 ---------------------DLDSSRRVFYQMPEKNNITWTAMVQGLAENGFAEESISL 599
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
F DM G+ PNE T +++ + H
Sbjct: 600 FEDMIENGIAPNEHTFLAILFACSH----------------------------------- 624
Query: 203 CSSLVEARSLFDEMKERNIVS----WNVMLNGFAKAGLVELARELFERIPSK-DVVSWGT 257
C + +A F+ M+ I + M++ A+AG + A EL ++ S+ D SW +
Sbjct: 625 CGLVEQAIHYFETMQAHGIPPKSKHYTCMVDVLARAGCLPEAEELLMKVSSELDTSSWSS 684
Query: 258 MIDG---YLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGR 299
++ Y E A + D A V++ ++ ++CG+
Sbjct: 685 LLSACSTYRNKEIGERAAKKLHELEKDNTA-GYVLLSNMYASCGK 728
>gi|449470118|ref|XP_004152765.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 360 bits (925), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 217/654 (33%), Positives = 338/654 (51%), Gaps = 26/654 (3%)
Query: 30 LRYCSAH--IAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTL 87
L+ CS + S + +H+ + SG + N L+ +Y K + A+ +F+
Sbjct: 18 LQLCSPQDPASFSLARAVHAHMIASGFKPRGHFLNRLLEMYCKSSNVVYARQLFEEIPNP 77
Query: 88 DPVACNIMISGYIRNDRLNDAREVFDKTPI--KCCVSYTSMIMGFAQNDCWREALEVFRD 145
D +A +I+ Y L RE+F+ TP+ + V Y +MI G+A N ALE+FR
Sbjct: 78 DAIARTTLITAYCALGNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRA 137
Query: 146 MRILGVIPNEVTLASVISSSV-HLGGIWECRMLHGLVIKLMIDGFVIISTNLLN------ 198
MR P++ T SV+S+ V +G +C +H V+K G +S+++LN
Sbjct: 138 MRRDDFRPDDFTFTSVLSALVLFVGNEQQCGQMHCAVVK---TGMGCVSSSVLNALLSVY 194
Query: 199 ------MYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDV 252
+ CS++V AR LFDEM +R+ ++W M+ G+ + + ARE+FE +
Sbjct: 195 VKRASELGIPCSAMVSARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAMVENLG 254
Query: 253 VSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSI 312
+W MI GY+ EALT+ R M GI +D+ +ISAC +F G Q+H+
Sbjct: 255 AAWNAMISGYVHCGCFQEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQMHAY 314
Query: 313 IVKAGFDC-YDF---IQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGM 368
I+K + + F + +I Y +++ AR F +I +WNA+++G++ G
Sbjct: 315 ILKNELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYAMPVRNIITWNAILSGYVNAGR 374
Query: 369 IEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCA 428
+E+A+ F M +++ + + MISG AQN + L+LF M G +P + A
Sbjct: 375 MEEAKSFFEEMPVKNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTA 434
Query: 429 IASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVS 488
+ G L+ GR H +++ + ++ A+I MYAKCG + A VF + + +
Sbjct: 435 CSVLGALENGRQLHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVF--VTMPSVDLV 492
Query: 489 PWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSM 548
WN++I L HG ++++ + K + + ITF+ VL+ C HAGLV+ G YF SM
Sbjct: 493 SWNSMIAALGQHGHGVKAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSM 552
Query: 549 KSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEV 608
Y + P HY MVDL RAG A VI SMP K +W LLA RIHGN+++
Sbjct: 553 LESYGITPCEDHYARMVDLFCRAGMFSYARIVIDSMPSKPGAPVWEALLAGCRIHGNMDL 612
Query: 609 GERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
G AA+ L L P + + VLLSNIYAD GRW D +RK MRD +++ P S
Sbjct: 613 GIEAAEQLFKLMPQNDGTYVLLSNIYADVGRWNDVAKVRKLMRDQAVRKEPACS 666
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 105/239 (43%), Gaps = 45/239 (18%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
+ A AL CS A+ G+Q+H+ + G ES+ + N++I++YAKCG++ A+S+F
Sbjct: 425 DFAFAGALTACSVLGALENGRQLHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFV 484
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+ ++D V S+ SMI Q+ +A+E+
Sbjct: 485 TMPSVDLV-------------------------------SWNSMIAALGQHGHGVKAIEL 513
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECR-----MLHGLVIKLMIDGFVIISTNLL 197
F M GV P+ +T +V+++ H G + + R ML I D + ++
Sbjct: 514 FDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLESYGITPCEDHY----ARMV 569
Query: 198 NMYCVCSSLVEARSLFDEMKER-NIVSWNVMLNGFAKAGL----VELARELFERIPSKD 251
+++C AR + D M + W +L G G +E A +LF+ +P D
Sbjct: 570 DLFCRAGMFSYARIVIDSMPSKPGAPVWEALLAGCRIHGNMDLGIEAAEQLFKLMPQND 628
>gi|347954534|gb|AEP33767.1| organelle transcript processing 82, partial [Matthiola incana]
Length = 694
Score = 360 bits (923), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 205/563 (36%), Positives = 311/563 (55%), Gaps = 39/563 (6%)
Query: 108 AREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVH 167
A VFD + + +M G A + AL+++ M LG++P+ T ++ S
Sbjct: 42 AISVFDTIQEPNLLIWNTMFRGHALSSDPVSALKLYLVMISLGLLPDSYTFPFLLKSCAK 101
Query: 168 LGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVM 227
E + +HG V+KL D + + T+L++MY L +AR +FD R++VS+ +
Sbjct: 102 SKIRKEGQQIHGHVLKLGFDLDIYVHTSLISMYAQNGRLEDARKVFDISSHRDVVSYTAL 161
Query: 228 LNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRA-MLCDGIAPN 286
+ G+ G +E A++LF+ IP KDVVSW MI GY++ EAL +++ M+ + P+
Sbjct: 162 IAGYVSRGYIESAQKLFDEIPGKDVVSWNAMISGYVETGNYKEALELFKEMMMMTNVRPD 221
Query: 287 DVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFE 346
+ +V ++SAC ++ + G +HS I GF I +I Y+ G + A F+
Sbjct: 222 ESTMVTVVSACAQSDSIELGRHVHSWINDHGFASNLKIVNALIDLYSKFGEVETACELFD 281
Query: 347 LGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALEL 406
+ SWN LI G+ + ++ AL L
Sbjct: 282 GLWNKDVISWNTLIGGYTHMNLYKE-------------------------------ALLL 310
Query: 407 FHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYV---LNNSITLNDNLSAAIIDM 463
F M+ +G PN++TM+S+ A A G + GRW H Y+ L +T +L ++IDM
Sbjct: 311 FQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYINKKLKGVVTNVSSLQTSLIDM 370
Query: 464 YAKCGSINTAFEVF-YHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNS 522
YAKCG I+ A +VF + +R S+S WNA+I G AMHG AN I+S + I+ +
Sbjct: 371 YAKCGDIDAAQQVFDSSMSNR--SLSTWNAMISGFAMHGRANAAFDIFSRMRMNGIEPDD 428
Query: 523 ITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIR 582
ITF+G+LS C H+G++DLG F+SM Y + P L+HYGCM+DLLG +G ++AEE+I
Sbjct: 429 ITFVGLLSACSHSGMLDLGRNIFRSMTRGYEITPKLEHYGCMIDLLGHSGLFKEAEEMIN 488
Query: 583 SMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWED 642
+MPM+ D VIW +LL A +IHGN+E+GE AK L ++P + S VLLSNIYA AGRW +
Sbjct: 489 TMPMEPDGVIWCSLLKACKIHGNLELGESFAKKLIKIEPGNSGSYVLLSNIYAAAGRWNE 548
Query: 643 AFSIRKEMRDCGM-KRLPGFSGV 664
IR + D GM K++PG S +
Sbjct: 549 VAKIRALLNDKGMKKKVPGCSSI 571
Score = 169 bits (429), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 127/497 (25%), Positives = 221/497 (44%), Gaps = 73/497 (14%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
L+ C+ +GQQIH + K G + + ++ SLI++YA+ G + A+ +FD S D
Sbjct: 96 LKSCAKSKIRKEGQQIHGHVLKLGFDLDIYVHTSLISMYAQNGRLEDARKVFDISSHRDV 155
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
V+ +I+GY+ + A+++FD+ P K VS+ +MI G+ + ++EALE+F++M ++
Sbjct: 156 VSYTALIAGYVSRGYIESAQKLFDEIPGKDVVSWNAMISGYVETGNYKEALELFKEMMMM 215
Query: 150 -GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVE 208
V P+E T+ +V+S+ I R +H + + I L+++Y +
Sbjct: 216 TNVRPDESTMVTVVSACAQSDSIELGRHVHSWINDHGFASNLKIVNALIDLYSKFGEVET 275
Query: 209 ARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERL 268
A LFD + ++++SWN + I GY +
Sbjct: 276 ACELFDGLWNKDVISWNTL-------------------------------IGGYTHMNLY 304
Query: 269 SEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSII---VKAGFDCYDFIQ 325
EAL +++ ML G PNDV ++ ++ AC A G IH I +K +Q
Sbjct: 305 KEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYINKKLKGVVTNVSSLQ 364
Query: 326 ATIIHFYAACGRINLARLQFELGIKDH-IASWNALIAGFIRNGMIEDARQLFNNMQKRDV 384
++I YA CG I+ A+ F+ + + +++WNA+I+GF +G
Sbjct: 365 TSLIDMYAKCGDIDAAQQVFDSSMSNRSLSTWNAMISGFAMHG----------------- 407
Query: 385 YSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEY 444
+ N A ++F M G++P++IT V + A + SG L GR
Sbjct: 408 --------------RANAAFDIFSRMRMNGIEPDDITFVGLLSACSHSGMLDLGRNIFRS 453
Query: 445 VLNN-SITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDA 503
+ IT +ID+ G A E+ T + P I C L
Sbjct: 454 MTRGYEITPKLEHYGCMIDLLGHSGLFKEAEEMI-----NTMPMEPDGVIWCSLLKACKI 508
Query: 504 NLTLKIYSDLEKRNIKL 520
+ L++ K+ IK+
Sbjct: 509 HGNLELGESFAKKLIKI 525
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 125/282 (44%), Gaps = 66/282 (23%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E +V+ + C+ ++ G+ +HS I G SN I N+LI+LY+K G + A +FD
Sbjct: 222 ESTMVTVVSACAQSDSIELGRHVHSWINDHGFASNLKIVNALIDLYSKFGEVETACELFD 281
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
D ++ N +I GY + ++EAL +
Sbjct: 282 GLWNKDVISWNTLIGGY-------------------------------THMNLYKEALLL 310
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLV---IKLMIDGFVIISTNLLNM 199
F++M G PN+VT+ S++ + HLG I R +H + +K ++ + T+L++M
Sbjct: 311 FQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYINKKLKGVVTNVSSLQTSLIDM 370
Query: 200 YCVCSSLVEARSLFD-EMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTM 258
Y C + A+ +FD M R++ +WN M++GFA G A ++F R
Sbjct: 371 YAKCGDIDAAQQVFDSSMSNRSLSTWNAMISGFAMHGRANAAFDIFSR------------ 418
Query: 259 IDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRA 300
M +GI P+D+ V L+SAC +
Sbjct: 419 -------------------MRMNGIEPDDITFVGLLSACSHS 441
>gi|357167109|ref|XP_003581008.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Brachypodium distachyon]
Length = 921
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 226/710 (31%), Positives = 345/710 (48%), Gaps = 99/710 (13%)
Query: 48 LIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLND 107
++F + N L++ YA+ G + A+ +FD + VA N M+S Y++N +
Sbjct: 85 ILFDAISGGNVRTATILLSGYARLGRVLDARRVFDGMPERNTVAWNAMVSCYVQNGDITM 144
Query: 108 AREVFDKTPIKCCVSYTSMIMGFAQN----DCWR-------------------------- 137
AR +FD P + S+ SM+ G+ + D W
Sbjct: 145 ARRLFDAMPSRDVTSWNSMVTGYCHSRQMVDAWNLFKQMPQRNLVTWTVMISGYVRIEQH 204
Query: 138 -EALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNL 196
+ ++FR M G P++ ASV+S+ L + +L LV+K + V+I T++
Sbjct: 205 GKGWDIFRMMHHEGASPDQSNFASVLSAVTGLQDLGVLEVLRPLVLKTGFESDVVIGTSI 264
Query: 197 LNMYCVCSSLVE-ARSLFDEMKERNIVSWNVM---------------------------- 227
LN+Y +S ++ A FD M ERN +W+ M
Sbjct: 265 LNVYTRDASALDIAIKFFDGMVERNEYTWSTMIAALSHGGRIDAAIAVYGRDPVKSIPSQ 324
Query: 228 ---LNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYL--------------------- 263
L G A+ G + AR LFE+IP VVSW MI GY+
Sbjct: 325 TALLTGLARCGRITEARILFEQIPDPIVVSWNAMITGYMQNGMVDEAKELFDRMPFRNTI 384
Query: 264 ----------QVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSII 313
Q R EAL + +A+ +G+ P+ + AC A G Q+HS+
Sbjct: 385 SWAGMIAGYAQNGRSEEALDLLQALHRNGMLPSLSSLTSSFLACSHIGALETGRQVHSLA 444
Query: 314 VKAGFDCYDFIQATIIHFYAACGRINLARLQF-ELGIKDHIASWNALIAGFIRNGMIEDA 372
VKAG ++ +I Y C + R F + +KD + SWN+ IA ++N M+EDA
Sbjct: 445 VKAGCQFNSYVCNALISMYGKCRNMEYVRQVFNRMRVKDTV-SWNSFIAALVQNNMLEDA 503
Query: 373 RQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASS 432
R +F+NM RDV SW+ +IS YAQ E+ + A+E F M+ KPN + +
Sbjct: 504 RHIFDNMLSRDVVSWTTIISAYAQAERGDEAVEFFKTMLHEHEKPNSPILTILLSVCGGL 563
Query: 433 GTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNA 492
G+ K G+ H + + + ++ A++ MY KCG ++ +VF + +R + WN
Sbjct: 564 GSAKLGQQIHTVAIKHGMDSELIVANALMSMYFKCGCADS-HKVFDSMEER--DIFTWNT 620
Query: 493 IICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVY 552
I G A HG +K+Y +E + N +TF+G+L+ C HAGLVD G ++FKSM Y
Sbjct: 621 FITGCAQHGLGREAIKMYEHMESVGVLPNEVTFVGLLNACSHAGLVDEGWQFFKSMSRDY 680
Query: 553 NVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERA 612
+ P L+HY CMVDLLGR G ++ AE+ I MP++ D VIW LL A +IH N E+G RA
Sbjct: 681 GLTPLLEHYACMVDLLGRTGDVQGAEKFIYDMPIEPDTVIWSALLGACKIHKNAEIGRRA 740
Query: 613 AKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
A+ L +PS+ + V+LSNIY+ G W + +RK M+ G+ + PG S
Sbjct: 741 AEKLFTTEPSNAGNYVMLSNIYSSLGMWVEVAELRKIMKQRGVSKEPGCS 790
Score = 211 bits (538), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 130/472 (27%), Positives = 240/472 (50%), Gaps = 38/472 (8%)
Query: 38 AVSQGQQIHSLIFKSGLESNTFI--QNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIM 95
A+S G +I + I G + I Q +L+ A+CG I++A+ +F+ V+ N M
Sbjct: 299 ALSHGGRIDAAIAVYGRDPVKSIPSQTALLTGLARCGRITEARILFEQIPDPIVVSWNAM 358
Query: 96 ISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNE 155
I+GY++N +++A+E+FD+ P + +S+ MI G+AQN EAL++ + + G++P+
Sbjct: 359 ITGYMQNGMVDEAKELFDRMPFRNTISWAGMIAGYAQNGRSEEALDLLQALHRNGMLPSL 418
Query: 156 VTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDE 215
+L S + H+G + R +H L +K + L++MY C ++ R +F+
Sbjct: 419 SSLTSSFLACSHIGALETGRQVHSLAVKAGCQFNSYVCNALISMYGKCRNMEYVRQVFNR 478
Query: 216 MKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMY 275
M+ ++ VSWN + + ++E AR +F+ + S+DVVSW T+I Y Q ER EA+ +
Sbjct: 479 MRVKDTVSWNSFIAALVQNNMLEDARHIFDNMLSRDVVSWTTIISAYAQAERGDEAVEFF 538
Query: 276 RAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAAC 335
+ ML + PN ++ L+S CG + G QIH++ +K G D + ++ Y C
Sbjct: 539 KTMLHEHEKPNSPILTILLSVCGGLGSAKLGQQIHTVAIKHGMDSELIVANALMSMYFKC 598
Query: 336 GRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYA 395
G D+ ++F++M++RD+++W+ I+G A
Sbjct: 599 G--------------------------------CADSHKVFDSMEERDIFTWNTFITGCA 626
Query: 396 QNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDN 455
Q+ A++++ M GV PNE+T V + A + +G + EG W ++ L
Sbjct: 627 QHGLGREAIKMYEHMESVGVLPNEVTFVGLLNACSHAGLVDEG-WQFFKSMSRDYGLTPL 685
Query: 456 LS--AAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANL 505
L A ++D+ + G + A + Y + +V W+A++ +H +A +
Sbjct: 686 LEHYACMVDLLGRTGDVQGAEKFIYDMPIEPDTVI-WSALLGACKIHKNAEI 736
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 158/673 (23%), Positives = 275/673 (40%), Gaps = 119/673 (17%)
Query: 87 LDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDM 146
LD A + I R RL +AREVFD P + +++ SMI + + + D
Sbjct: 31 LDKSAHSARIRELARLGRLREAREVFDAMPHRDIIAWNSMISAYCNSG-------MLEDA 83
Query: 147 RIL--GVIPNEVTLASV-ISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
RIL + V A++ +S LG + + R V M + + +++ Y
Sbjct: 84 RILFDAISGGNVRTATILLSGYARLGRVLDARR----VFDGMPERNTVAWNAMVSCYVQN 139
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYL 263
+ AR LFD M R++ SWN M+ G+ + + A LF+++P +++V+W MI GY+
Sbjct: 140 GDITMARRLFDAMPSRDVTSWNSMVTGYCHSRQMVDAWNLFKQMPQRNLVTWTVMISGYV 199
Query: 264 QVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDF 323
++E+ + ++R M +G +P+ ++SA G + +++K GF+
Sbjct: 200 RIEQHGKGWDIFRMMHHEGASPDQSNFASVLSAVTGLQDLGVLEVLRPLVLKTGFESDVV 259
Query: 324 IQATIIHFY--------------------------------AACGRINLARLQFELGIKD 351
I +I++ Y + GRI+ A +
Sbjct: 260 IGTSILNVYTRDASALDIAIKFFDGMVERNEYTWSTMIAALSHGGRIDAAIAVYGRDPVK 319
Query: 352 HIASWNALIAGFIR-------------------------------NGMIEDARQLFNNMQ 380
I S AL+ G R NGM+++A++LF+ M
Sbjct: 320 SIPSQTALLTGLARCGRITEARILFEQIPDPIVVSWNAMITGYMQNGMVDEAKELFDRMP 379
Query: 381 KRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRW 440
R+ SW+ MI+GYAQN + AL+L + G+ P+ ++ S F A + G L+ GR
Sbjct: 380 FRNTISWAGMIAGYAQNGRSEEALDLLQALHRNGMLPSLSSLTSSFLACSHIGALETGRQ 439
Query: 441 AHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTT--------------- 485
H + N + A+I MY KC ++ +VF +R + T
Sbjct: 440 VHSLAVKAGCQFNSYVCNALISMYGKCRNMEYVRQVFNRMRVKDTVSWNSFIAALVQNNM 499
Query: 486 --------------SVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLST 531
V W II A + ++ + + + K NS +LS
Sbjct: 500 LEDARHIFDNMLSRDVVSWTTIISAYAQAERGDEAVEFFKTMLHEHEKPNSPILTILLSV 559
Query: 532 CCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVV 591
C G LG++ ++ + ++ +L ++ + + G D+ +V SM + D+
Sbjct: 560 CGGLGSAKLGQQ-IHTVAIKHGMDSELIVANALMSMYFKCG-CADSHKVFDSMEER-DIF 616
Query: 592 IWGTLLAASRIHGNVEVGERAAK-----SLAGLQPSHGPSRVLLSNIYADAGRWEDAFSI 646
W T + HG +G A K G+ P+ + V L N + AG ++ +
Sbjct: 617 TWNTFITGCAQHG---LGREAIKMYEHMESVGVLPNE-VTFVGLLNACSHAGLVDEGWQF 672
Query: 647 RKEM-RDCGMKRL 658
K M RD G+ L
Sbjct: 673 FKSMSRDYGLTPL 685
Score = 135 bits (341), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 93/332 (28%), Positives = 157/332 (47%), Gaps = 34/332 (10%)
Query: 33 CSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVAC 92
CS A+ G+Q+HSL K+G + N+++ N+LI++Y KC + + +F+ D V+
Sbjct: 428 CSHIGALETGRQVHSLAVKAGCQFNSYVCNALISMYGKCRNMEYVRQVFNRMRVKDTVSW 487
Query: 93 NIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVI 152
N I+ ++N+ L DAR +FD + VS+T++I +AQ + EA+E F+ M
Sbjct: 488 NSFIAALVQNNMLEDARHIFDNMLSRDVVSWTTIISAYAQAERGDEAVEFFKTMLHEHEK 547
Query: 153 PNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSL 212
PN L ++S LG + +H + IK +D +I++ L++MY C ++ +
Sbjct: 548 PNSPILTILLSVCGGLGSAKLGQQIHTVAIKHGMDSELIVANALMSMYFKCGC-ADSHKV 606
Query: 213 FDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEAL 272
FD M+ER+I +WN + G A+ GL EA+
Sbjct: 607 FDSMEERDIFTWNTFITGCAQHGLGR-------------------------------EAI 635
Query: 273 TMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQ-IHSIIVKAGFDCYDFIQATIIHF 331
MY M G+ PN+V V L++AC A EG Q S+ G A ++
Sbjct: 636 KMYEHMESVGVLPNEVTFVGLLNACSHAGLVDEGWQFFKSMSRDYGLTPLLEHYACMVDL 695
Query: 332 YAACGRINLA-RLQFELGIKDHIASWNALIAG 362
G + A + +++ I+ W+AL+
Sbjct: 696 LGRTGDVQGAEKFIYDMPIEPDTVIWSALLGA 727
>gi|242034539|ref|XP_002464664.1| hypothetical protein SORBIDRAFT_01g023020 [Sorghum bicolor]
gi|241918518|gb|EER91662.1| hypothetical protein SORBIDRAFT_01g023020 [Sorghum bicolor]
Length = 650
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 177/440 (40%), Positives = 270/440 (61%), Gaps = 4/440 (0%)
Query: 225 NVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIA 284
N ++ ++ +G + LAR LF+ P++DVVSW T+I GY++ EAL ++ ++ DG A
Sbjct: 160 NAGVHFWSVSGSMVLARRLFDESPARDVVSWNTLIGGYVRSGLPREALELFWRLVEDGKA 219
Query: 285 --PNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLAR 342
P++V ++ +S C + G ++H + G C + ++ Y CG + LA+
Sbjct: 220 VRPDEVTMIGAVSGCAQMGDLELGKRLHEFVDSKGVRCTVRLMNAVMDMYVKCGSLELAK 279
Query: 343 LQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNM 402
FE + SW +I G R GM+EDAR LF+ M +RDV+ W+A+++GY QN+Q
Sbjct: 280 SVFERIDNKTVVSWTTMIVGHARLGMMEDARMLFDEMPERDVFPWNALMAGYVQNKQGKE 339
Query: 403 ALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIID 462
A+ LFH M ++ V PNEITMV++ A + G L+ G W H Y+ + + L+ L +++D
Sbjct: 340 AIALFHEMQESKVDPNEITMVNLLSACSQLGALEMGMWVHHYIDRHQLYLSVALGTSLVD 399
Query: 463 MYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNS 522
MYAKCG+I A +F I D+ W A+ICGLA HG A+ ++ + + ++ +
Sbjct: 400 MYAKCGNIKKAICIFKEIPDKNALT--WTAMICGLANHGHADEAIEYFQRMIDLGLQPDE 457
Query: 523 ITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIR 582
ITFIGVLS CCHAGLV G ++F M Y++E +KHY CM+DLLGRAG L++AE+++
Sbjct: 458 ITFIGVLSACCHAGLVKEGRQFFSLMHEKYHLERKMKHYSCMIDLLGRAGHLDEAEQLVN 517
Query: 583 SMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWED 642
+MPM D V+WG L A R+HGN+ +GE+AA L L PS VLL+N+YA+A +
Sbjct: 518 TMPMDPDAVVWGALFFACRMHGNITLGEKAAMKLVELDPSDSGIYVLLANMYAEANMRKK 577
Query: 643 AFSIRKEMRDCGMKRLPGFS 662
A +R MR G++++PG S
Sbjct: 578 ADKVRVMMRHLGVEKVPGCS 597
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 111/409 (27%), Positives = 199/409 (48%), Gaps = 45/409 (11%)
Query: 108 AREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILG--VIPNEVTLASVISSS 165
AR +FD++P + VS+ ++I G+ ++ REALE+F + G V P+EVT+ +S
Sbjct: 175 ARRLFDESPARDVVSWNTLIGGYVRSGLPREALELFWRLVEDGKAVRPDEVTMIGAVSGC 234
Query: 166 VHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWN 225
+G + + LH V + V + +++MY C SL A+S+F+ + + +VSW
Sbjct: 235 AQMGDLELGKRLHEFVDSKGVRCTVRLMNAVMDMYVKCGSLELAKSVFERIDNKTVVSWT 294
Query: 226 VMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAP 285
M+ G A+ G++E AR LF+ +P +DV W ++ GY+Q ++ EA+ ++ M + P
Sbjct: 295 TMIVGHARLGMMEDARMLFDEMPERDVFPWNALMAGYVQNKQGKEAIALFHEMQESKVDP 354
Query: 286 NDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQF 345
N++ +V+L+SAC + A G+ +H I + + +++ YA CG I A F
Sbjct: 355 NEITMVNLLSACSQLGALEMGMWVHHYIDRHQLYLSVALGTSLVDMYAKCGNIKKAICIF 414
Query: 346 ELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALE 405
+ + +W A+I G +G ++ A+E
Sbjct: 415 KEIPDKNALTWTAMICGLANHGHADE-------------------------------AIE 443
Query: 406 LFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLS--AAIIDM 463
F M+D G++P+EIT + V A +G +KEGR +++ L + + +ID+
Sbjct: 444 YFQRMIDLGLQPDEITFIGVLSACCHAGLVKEGRQFFS-LMHEKYHLERKMKHYSCMIDL 502
Query: 464 YAKCGSINTAFEVFYHIRDRTTSVSP----WNAIICGLAMHGDANLTLK 508
+ G ++ A ++ T + P W A+ MHG+ L K
Sbjct: 503 LGRAGHLDEAEQLV-----NTMPMDPDAVVWGALFFACRMHGNITLGEK 546
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 95/387 (24%), Positives = 163/387 (42%), Gaps = 73/387 (18%)
Query: 272 LTMYRAMLCDGIA-PNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIH 330
L +YRA+LC A P+ + L+ AC R G + + K GF F+ +H
Sbjct: 105 LPLYRALLCSSSARPDHLTFPFLLKACARLQYRPYGAAVLGHVQKLGFSADVFVVNAGVH 164
Query: 331 FYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAM 390
F++ G + LAR F+ + SWN LI G++R+G+
Sbjct: 165 FWSVSGSMVLARRLFDESPARDVVSWNTLIGGYVRSGL---------------------- 202
Query: 391 ISGYAQNEQPNMALELFHGMVDAG--VKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNN 448
P ALELF +V+ G V+P+E+TM+ A G L+ G+ HE+V +
Sbjct: 203 ---------PREALELFWRLVEDGKAVRPDEVTMIGAVSGCAQMGDLELGKRLHEFVDSK 253
Query: 449 SITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTT----------------------- 485
+ L A++DMY KCGS+ A VF I ++T
Sbjct: 254 GVRCTVRLMNAVMDMYVKCGSLELAKSVFERIDNKTVVSWTTMIVGHARLGMMEDARMLF 313
Query: 486 ------SVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVD 539
V PWNA++ G + + ++ ++++ + N IT + +LS C G ++
Sbjct: 314 DEMPERDVFPWNALMAGYVQNKQGKEAIALFHEMQESKVDPNEITMVNLLSACSQLGALE 373
Query: 540 LG---ERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTL 596
+G Y + +V +VD+ + G ++ A + + +P K + + W +
Sbjct: 374 MGMWVHHYIDRHQLYLSVALGTS----LVDMYAKCGNIKKAICIFKEIPDK-NALTWTAM 428
Query: 597 LAASRIHGNVEVGERAAKSL--AGLQP 621
+ HG+ + + + GLQP
Sbjct: 429 ICGLANHGHADEAIEYFQRMIDLGLQP 455
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/370 (23%), Positives = 169/370 (45%), Gaps = 62/370 (16%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E+ ++ A+ C+ + G+++H + G+ + N+++++Y KCG + AKS+F+
Sbjct: 224 EVTMIGAVSGCAQMGDLELGKRLHEFVDSKGVRCTVRLMNAVMDMYVKCGSLELAKSVFE 283
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
V+ MI G+ R + DAR +FD+ P + + +++ G+ QN +EA+ +
Sbjct: 284 RIDNKTVVSWTTMIVGHARLGMMEDARMLFDEMPERDVFPWNALMAGYVQNKQGKEAIAL 343
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
F +M+ V PNE+T+ +++S+ LG + +H + + + V + T+L++MY
Sbjct: 344 FHEMQESKVDPNEITMVNLLSACSQLGALEMGMWVHHYIDRHQLYLSVALGTSLVDMYAK 403
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
C ++ +A +F E+ ++N ++W M+ G A G + A E F+R MID
Sbjct: 404 CGNIKKAICIFKEIPDKNALTWTAMICGLANHGHADEAIEYFQR-----------MIDL- 451
Query: 263 LQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD 322
G+ P+++ + ++SAC A EG Q S++ +
Sbjct: 452 -------------------GLQPDEITFIGVLSACCHAGLVKEGRQFFSLMHE------- 485
Query: 323 FIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ-K 381
+ E +K ++ +I R G +++A QL N M
Sbjct: 486 -------------------KYHLERKMK----HYSCMIDLLGRAGHLDEAEQLVNTMPMD 522
Query: 382 RDVYSWSAMI 391
D W A+
Sbjct: 523 PDAVVWGALF 532
>gi|225434622|ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 743
Score = 359 bits (922), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 212/667 (31%), Positives = 336/667 (50%), Gaps = 69/667 (10%)
Query: 2 PLDHFHSVFNSQKANLQNSDY--ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTF 59
P H N L N Y +S + CS Q +QIH+ + ++GL + F
Sbjct: 12 PRSHSLPTPNPNSITLNNDRYFANHPTLSLIDQCSE---TKQLKQIHAQMLRTGLFFDPF 68
Query: 60 IQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKC 119
+ LI + A S F S L+ A++VFD+ P
Sbjct: 69 SASRLIT--------AAALSPFPS---------------------LDYAQQVFDQIPHPN 99
Query: 120 CVSYTSMIMGFAQNDCWREALEVF-RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLH 178
++ ++I +A + ++L +F R + P++ T +I ++ L ++ + H
Sbjct: 100 LYTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTGKAFH 159
Query: 179 GLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVE 238
G+VIK+++ V I +L++ Y AK G +
Sbjct: 160 GMVIKVLLGSDVFILNSLIHFY-------------------------------AKCGELG 188
Query: 239 LARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACG 298
L +F IP +DVVSW +MI ++Q EAL +++ M + PN + +V ++SAC
Sbjct: 189 LGYRVFVNIPRRDVVSWNSMITAFVQGGCPEEALELFQEMETQNVKPNGITMVGVLSACA 248
Query: 299 RAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNA 358
+ F G +HS I + + ++ Y CG + A+ F+ + I SW
Sbjct: 249 KKSDFEFGRWVHSYIERNRIGESLTLSNAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTT 308
Query: 359 LIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGM-VDAGVKP 417
++ G+ + G + A+ +F+ M +D+ +W+A+IS Y Q +P ALELFH + + KP
Sbjct: 309 MLVGYAKIGEYDAAQGIFDAMPNQDIAAWNALISAYEQCGKPKEALELFHELQLSKTAKP 368
Query: 418 NEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVF 477
+E+T+VS A A G + G W H Y+ + LN +L+ ++IDMY KCG + A VF
Sbjct: 369 DEVTLVSTLSACAQLGAMDLGGWIHVYIKKQGMKLNCHLTTSLIDMYCKCGDLQKALMVF 428
Query: 478 YHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGL 537
+ + + V W+A+I GLAMHG + ++S +++ +K N++TF +L C H GL
Sbjct: 429 HSVERKDVFV--WSAMIAGLAMHGHGKDAIALFSKMQEDKVKPNAVTFTNILCACSHVGL 486
Query: 538 VDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLL 597
V+ G +F M+ VY V P +KHY CMVD+LGRAG LE+A E+I MPM +WG LL
Sbjct: 487 VEEGRTFFNQMELVYGVLPGVKHYACMVDILGRAGLLEEAVELIEKMPMAPAASVWGALL 546
Query: 598 AASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKR 657
A IH NV + E+A L L+P + + VLLSNIYA AG+W+ +RK MRD G+K+
Sbjct: 547 GACTIHENVVLAEQACSQLIELEPGNHGAYVLLSNIYAKAGKWDRVSGLRKLMRDVGLKK 606
Query: 658 LPGFSGV 664
PG S +
Sbjct: 607 EPGCSSI 613
>gi|449462814|ref|XP_004149135.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
gi|449523485|ref|XP_004168754.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
Length = 687
Score = 359 bits (922), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 211/640 (32%), Positives = 335/640 (52%), Gaps = 40/640 (6%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
L C+ + ++H+ I KS S TFIQN LI++Y KCG + A+ +FD +
Sbjct: 26 LNQCARSRSARDTSRVHACIIKSPFASETFIQNRLIDVYGKCGCVDVARKLFDRMLERNI 85
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
+ N +I + ++ L+DA +F+K P S+ SMI GF Q+ + EAL F M
Sbjct: 86 FSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMISGFEQHGRFDEALVYFAQMHGH 145
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
G + NE + S +S+ L + +H LV + V + + L++MY
Sbjct: 146 GFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRSNYLSDVYMGSALVDMY--------- 196
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLS 269
+K G VE A+ +F+ + + VSW ++I Y Q +
Sbjct: 197 ----------------------SKCGRVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVD 234
Query: 270 EALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQAT-I 328
EAL ++ M+ G+ P++V + ++SAC A EG QIH+ +VK D I +
Sbjct: 235 EALKIFVEMIKCGVEPDEVTLASVVSACATISAIKEGQQIHARVVKCDEFRNDLILGNAL 294
Query: 329 IHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWS 388
+ YA C RIN AR+ F++ + S ++++G+ + ++ AR +F+NM +DV +W+
Sbjct: 295 LDMYAKCNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWN 354
Query: 389 AMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNN 448
A+I+G QN + AL LF + V P T ++ A A+ L+ GR AH +VL +
Sbjct: 355 ALIAGCTQNGENEEALILFRLLKRESVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKH 414
Query: 449 SITLNDN------LSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGD 502
+ ++IDMY KCGS+ VF H+ ++ WNA+I G A +G
Sbjct: 415 GFRFQYGEDSDVFVGNSLIDMYMKCGSVENGCRVFQHMLEK--DCVSWNAMIVGYAQNGF 472
Query: 503 ANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYG 562
N L+++ + + + +T IGVL C HAGL+D G YF+SM + + + P HY
Sbjct: 473 GNKALEVFCKMLESGEAPDHVTMIGVLCACSHAGLLDEGRYYFRSMTAQHGLMPLKDHYT 532
Query: 563 CMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPS 622
CMVDLLGRAG LE+A+ +I M M+ D ++WG+LLAA ++H N+++GE K L + P
Sbjct: 533 CMVDLLGRAGYLEEAKNLIEEMSMQPDAIVWGSLLAACKVHRNIQLGEYVVKKLLEVDPE 592
Query: 623 HGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
+ VLLSN+YA+ W++ +RK MR G+ + PG S
Sbjct: 593 NSGPYVLLSNMYAENRDWKNVVRVRKLMRQRGVVKQPGCS 632
Score = 201 bits (512), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 137/494 (27%), Positives = 240/494 (48%), Gaps = 77/494 (15%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E + SAL C+ + G QIHSL+++S S+ ++ ++L+++Y+KCG + A+S+FD
Sbjct: 151 EYSFGSALSACAGLQDLKLGSQIHSLVYRSNYLSDVYMGSALVDMYSKCGRVEYAQSVFD 210
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+ V+ N +I+ Y +N ++ EAL++
Sbjct: 211 EMTVRSRVSWNSLITCYEQNGPVD-------------------------------EALKI 239
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGF---VIISTNLLNM 199
F +M GV P+EVTLASV+S+ + I E + +H V+K D F +I+ LL+M
Sbjct: 240 FVEMIKCGVEPDEVTLASVVSACATISAIKEGQQIHARVVK--CDEFRNDLILGNALLDM 297
Query: 200 YCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMI 259
Y C+ + EAR +FD M R++VS M++G+AKA V++AR +F + KDV++W +I
Sbjct: 298 YAKCNRINEARIIFDMMPIRSVVSETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALI 357
Query: 260 DGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGF- 318
G Q EAL ++R + + + P +L++AC G Q HS ++K GF
Sbjct: 358 AGCTQNGENEEALILFRLLKRESVWPTHYTFGNLLNACANLADLQLGRQAHSHVLKHGFR 417
Query: 319 -----DCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDAR 373
D F+ ++I Y CG + F+ ++ SWNA+I G+ +NG
Sbjct: 418 FQYGEDSDVFVGNSLIDMYMKCGSVENGCRVFQHMLEKDCVSWNAMIVGYAQNGF----- 472
Query: 374 QLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSG 433
N ALE+F M+++G P+ +TM+ V CA + +G
Sbjct: 473 --------------------------GNKALEVFCKMLESGEAPDHVTMIGVLCACSHAG 506
Query: 434 TLKEGRWAHEYVL--NNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWN 491
L EGR+ + + + L D+ + ++D+ + G + A + + + ++ W
Sbjct: 507 LLDEGRYYFRSMTAQHGLMPLKDHYT-CMVDLLGRAGYLEEAKNLIEEMSMQPDAIV-WG 564
Query: 492 AIICGLAMHGDANL 505
+++ +H + L
Sbjct: 565 SLLAACKVHRNIQL 578
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 153/298 (51%), Gaps = 2/298 (0%)
Query: 293 LISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDH 352
L++ C R+ + + ++H+ I+K+ F FIQ +I Y CG +++AR F+ ++ +
Sbjct: 25 LLNQCARSRSARDTSRVHACIIKSPFASETFIQNRLIDVYGKCGCVDVARKLFDRMLERN 84
Query: 353 IASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVD 412
I SWN++I F ++G ++DA +F M + D SW++MISG+ Q+ + + AL F M
Sbjct: 85 IFSWNSIICAFTKSGFLDDAVHIFEKMPQVDQCSWNSMISGFEQHGRFDEALVYFAQMHG 144
Query: 413 AGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINT 472
G NE + S A A LK G H V ++ + + +A++DMY+KCG +
Sbjct: 145 HGFLVNEYSFGSALSACAGLQDLKLGSQIHSLVYRSNYLSDVYMGSALVDMYSKCGRVEY 204
Query: 473 AFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTC 532
A VF + R S WN++I +G + LKI+ ++ K ++ + +T V+S C
Sbjct: 205 AQSVFDEMTVR--SRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVTLASVVSAC 262
Query: 533 CHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADV 590
+ G++ + DL ++D+ + ++ +A + MP+++ V
Sbjct: 263 ATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRINEARIIFDMMPIRSVV 320
>gi|225449732|ref|XP_002267472.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 1058
Score = 359 bits (922), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 235/719 (32%), Positives = 346/719 (48%), Gaps = 114/719 (15%)
Query: 48 LIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLND 107
L+F + + N L+ YAK G I +A+ +F+S + + V+ N MISGY++N L +
Sbjct: 223 LLFDAFVGKNIRTWTILLTGYAKEGRIEEAREVFESMTERNVVSWNAMISGYVQNGDLKN 282
Query: 108 AREVFDKTPIKCCVSYTSMIMGFAQNDCWR--EALEVFRDMRILGVIP--NEVTLASVIS 163
AR++FD+ P K S+ S++ G+ C+R EA E+F M P N V+ +IS
Sbjct: 283 ARKLFDEMPEKNVASWNSVVTGYCH--CYRMSEARELFDQM------PERNSVSWMVMIS 334
Query: 164 SSVHLGGIWE--------CRM---------------------------LHGLVIKLMIDG 188
VH+ WE CR L + IK +G
Sbjct: 335 GYVHISDYWEAWDVFVKMCRTVARPDQSIFVVVLSAITGLDDLELIGSLRPIAIKTGYEG 394
Query: 189 FVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIP 248
V++ + +LN Y SL A F+ M ERN SW M+ FA+ G ++ A +L+ER+P
Sbjct: 395 DVVVGSAILNAYTRNGSLDLAMHFFETMPERNEYSWTTMIAAFAQCGRLDDAIQLYERVP 454
Query: 249 SK-------------------------------DVVSWGTMIDGYLQVERLSEALTMYRA 277
+ +VV+W +I GY Q L EA +++
Sbjct: 455 EQTVATKTAMMTAYAQVGRIQKARLIFDEILNPNVVAWNAIIAGYTQNGMLKEAKDLFQK 514
Query: 278 MLCDGIA-------------------------------PNDVMIVDLISACGRAMAFGEG 306
M A P+D +SAC G
Sbjct: 515 MPVKNSASWAAMIAGFVQNEESREALELLIELHRSGSVPSDSSFTSALSACANIGDVEIG 574
Query: 307 LQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFE-LGIKDHIASWNALIAGFIR 365
IHS+ +K G ++ +I YA CG + F + +KD + SWN+LI+G
Sbjct: 575 RVIHSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGSHVFRTIRVKDTV-SWNSLISGLSE 633
Query: 366 NGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSV 425
N M++DAR +F M KRDV SW+A+IS Y Q +AL+LF M+ G+KPN++T+ S+
Sbjct: 634 NYMLDDARVVFEKMPKRDVVSWTAIISAYVQAGHGEVALDLFLDMLARGIKPNQLTVTSL 693
Query: 426 FCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTT 485
A + G +K G H + + ++I MY KCG F VF + +
Sbjct: 694 LSACGNLGAIKLGEQFHALIFKLGFDTFLFVGNSLITMYFKCG-YEDGFCVFEEMPEH-- 750
Query: 486 SVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYF 545
+ WNA++ G A +G +KI+ +E I + ++F+GVL C HAGLVD G +F
Sbjct: 751 DLITWNAVLVGCAQNGLGKEAIKIFEQMEVEGILPDQMSFLGVLCACSHAGLVDEGWAHF 810
Query: 546 KSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGN 605
SM Y + P + HY CMVDLLGRAG L +AE +I +MP+K D VIW LL A RIH N
Sbjct: 811 NSMTQKYGIMPLVYHYTCMVDLLGRAGYLSEAEALIENMPVKPDSVIWEALLGACRIHRN 870
Query: 606 VEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
VE+G+R A+ L + + VLLSN++A G W+ IRK M+D G+ + PG S +
Sbjct: 871 VELGQRVAERLFQMTKPKSATYVLLSNLFASQGMWDKVAEIRKLMKDQGLTKEPGISWI 929
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 172/656 (26%), Positives = 283/656 (43%), Gaps = 138/656 (21%)
Query: 51 KSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDARE 110
K +++ F N+ I + G + +A+ +F+ D V+ N MI+GY +N ++++AR
Sbjct: 164 KETPQTHLFQCNTRIQELGRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARL 223
Query: 111 VFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGG 170
+FD K ++T ++ G+A+ EA EVF M T +V+S
Sbjct: 224 LFDAFVGKNIRTWTILLTGYAKEGRIEEAREVFESM----------TERNVVS------- 266
Query: 171 IWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNG 230
W MI G+V L AR LFDEM E+N+ SWN ++ G
Sbjct: 267 -WNA----------MISGYV-----------QNGDLKNARKLFDEMPEKNVASWNSVVTG 304
Query: 231 FAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIA-PNDVM 289
+ + ARELF+++P ++ VSW MI GY+ + EA ++ M C +A P+ +
Sbjct: 305 YCHCYRMSEARELFDQMPERNSVSWMVMISGYVHISDYWEAWDVFVKM-CRTVARPDQSI 363
Query: 290 IVDLISACG-----------RAMAFGEGLQIHSIIVKAGFDCY----------------- 321
V ++SA R +A G + ++ A + Y
Sbjct: 364 FVVVLSAITGLDDLELIGSLRPIAIKTGYEGDVVVGSAILNAYTRNGSLDLAMHFFETMP 423
Query: 322 ---DFIQATIIHFYAAC-------------------------------GRINLARLQFEL 347
++ T+I +A C GRI ARL F+
Sbjct: 424 ERNEYSWTTMIAAFAQCGRLDDAIQLYERVPEQTVATKTAMMTAYAQVGRIQKARLIFDE 483
Query: 348 GIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELF 407
+ ++ +WNA+IAG+ +NGM+++A+ LF M ++ SW+AMI+G+ QNE+ ALEL
Sbjct: 484 ILNPNVVAWNAIIAGYTQNGMLKEAKDLFQKMPVKNSASWAAMIAGFVQNEESREALELL 543
Query: 408 HGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKC 467
+ +G P++ + S A A+ G ++ GR H + N + +I MYAKC
Sbjct: 544 IELHRSGSVPSDSSFTSALSACANIGDVEIGRVIHSLAIKTGCQFNSYVMNGLISMYAKC 603
Query: 468 GSINTAFEVFYHIRDRTT-----------------------------SVSPWNAIICGLA 498
G++ VF IR + T V W AII
Sbjct: 604 GNVEDGSHVFRTIRVKDTVSWNSLISGLSENYMLDDARVVFEKMPKRDVVSWTAIISAYV 663
Query: 499 MHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDL 558
G + L ++ D+ R IK N +T +LS C + G + LGE+ F ++ + L
Sbjct: 664 QAGHGEVALDLFLDMLARGIKPNQLTVTSLLSACGNLGAIKLGEQ-FHALIFKLGFDTFL 722
Query: 559 KHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAK 614
++ + + G ED V MP + D++ W +L +G +G+ A K
Sbjct: 723 FVGNSLITMYFKCG-YEDGFCVFEEMP-EHDLITWNAVLVGCAQNG---LGKEAIK 773
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 128/573 (22%), Positives = 254/573 (44%), Gaps = 107/573 (18%)
Query: 45 IHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDR 104
+ + K+G E + + ++++N Y + G + A F++ + + MI+ + + R
Sbjct: 383 LRPIAIKTGYEGDVVVGSAILNAYTRNGSLDLAMHFFETMPERNEYSWTTMIAAFAQCGR 442
Query: 105 LNDAREVFDKTPIKCCVSYTSM-------------------------------IMGFAQN 133
L+DA +++++ P + + T+M I G+ QN
Sbjct: 443 LDDAIQLYERVPEQTVATKTAMMTAYAQVGRIQKARLIFDEILNPNVVAWNAIIAGYTQN 502
Query: 134 DCWREALEVFRDMRIL-------------------------------GVIPNEVTLASVI 162
+EA ++F+ M + G +P++ + S +
Sbjct: 503 GMLKEAKDLFQKMPVKNSASWAAMIAGFVQNEESREALELLIELHRSGSVPSDSSFTSAL 562
Query: 163 SSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIV 222
S+ ++G + R++H L IK + L++MY C ++ + +F ++ ++ V
Sbjct: 563 SACANIGDVEIGRVIHSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGSHVFRTIRVKDTV 622
Query: 223 SWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDG 282
SWN +++G ++ +++ AR +FE++P +DVVSW +I Y+Q AL ++ ML G
Sbjct: 623 SWNSLISGLSENYMLDDARVVFEKMPKRDVVSWTAIISAYVQAGHGEVALDLFLDMLARG 682
Query: 283 IAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLAR 342
I PN + + L+SACG A G Q H++I K GFD + F+ ++I Y CG +
Sbjct: 683 IKPNQLTVTSLLSACGNLGAIKLGEQFHALIFKLGFDTFLFVGNSLITMYFKCGYED-GF 741
Query: 343 LQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNM 402
FE + + +WNA++ G +NG+ ++A ++F M+
Sbjct: 742 CVFEEMPEHDLITWNAVLVGCAQNGLGKEAIKIFEQMEVE-------------------- 781
Query: 403 ALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAI-- 460
G+ P++++ + V CA + +G + EG WAH NS+T + +
Sbjct: 782 -----------GILPDQMSFLGVLCACSHAGLVDEG-WAH----FNSMTQKYGIMPLVYH 825
Query: 461 ----IDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKR 516
+D+ + G ++ A + ++ + SV W A++ +H + L ++ L +
Sbjct: 826 YTCMVDLLGRAGYLSEAEALIENMPVKPDSVI-WEALLGACRIHRNVELGQRVAERLFQM 884
Query: 517 NIKLNSITFIGVLSTCCHAGLVDLGERYFKSMK 549
K S T++ + + G+ D K MK
Sbjct: 885 T-KPKSATYVLLSNLFASQGMWDKVAEIRKLMK 916
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 98/340 (28%), Positives = 164/340 (48%), Gaps = 34/340 (10%)
Query: 25 ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSC 84
+ SAL C+ V G+ IHSL K+G + N+++ N LI++YAKCG + +F +
Sbjct: 557 SFTSALSACANIGDVEIGRVIHSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGSHVFRTI 616
Query: 85 STLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFR 144
D V+ N +ISG N L+DAR VF+K P + VS+T++I + Q AL++F
Sbjct: 617 RVKDTVSWNSLISGLSENYMLDDARVVFEKMPKRDVVSWTAIISAYVQAGHGEVALDLFL 676
Query: 145 DMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCS 204
DM G+ PN++T+ S++S+ +LG I H L+ KL D F+ + +L+ MY C
Sbjct: 677 DMLARGIKPNQLTVTSLLSACGNLGAIKLGEQFHALIFKLGFDTFLFVGNSLITMYFKC- 735
Query: 205 SLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQ 264
+ +F+EM E ++++WN +L G A+ GL +
Sbjct: 736 GYEDGFCVFEEMPEHDLITWNAVLVGCAQNGLGK-------------------------- 769
Query: 265 VERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGL-QIHSIIVKAGFDCYDF 323
EA+ ++ M +GI P+ + + ++ AC A EG +S+ K G +
Sbjct: 770 -----EAIKIFEQMEVEGILPDQMSFLGVLCACSHAGLVDEGWAHFNSMTQKYGIMPLVY 824
Query: 324 IQATIIHFYAACGRINLARLQFE-LGIKDHIASWNALIAG 362
++ G ++ A E + +K W AL+
Sbjct: 825 HYTCMVDLLGRAGYLSEAEALIENMPVKPDSVIWEALLGA 864
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 150/331 (45%), Gaps = 29/331 (8%)
Query: 327 TIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYS 386
T I GR+ AR F I+ + SWN++I G+ +NG +++AR LF+ +++ +
Sbjct: 176 TRIQELGRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARLLFDAFVGKNIRT 235
Query: 387 WSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVL 446
W+ +++GYA+ + A E+F M + V ++ ++ +G LK R + +
Sbjct: 236 WTILLTGYAKEGRIEEAREVFESMTERNV----VSWNAMISGYVQNGDLKNARKLFDEMP 291
Query: 447 NNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLT 506
++ + +++ Y C ++ A E+F + +R SVS W +I G D
Sbjct: 292 EKNVASWN----SVVTGYCHCYRMSEARELFDQMPER-NSVS-WMVMISGYVHISDYWEA 345
Query: 507 LKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDL---GERYFKSMKSVYNVEPDLKHYGC 563
++ + + + + F+ VLS GL DL G ++K+ Y E D+
Sbjct: 346 WDVFVKMCRTVARPDQSIFVVVLSAI--TGLDDLELIGSLRPIAIKTGY--EGDVVVGSA 401
Query: 564 MVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAA----SRIHGNVEVGERAAKSLAGL 619
+++ R G L+ A +MP + + W T++AA R+ +++ ER +
Sbjct: 402 ILNAYTRNGSLDLAMHFFETMPERNEYS-WTTMIAAFAQCGRLDDAIQLYERVPEQTVA- 459
Query: 620 QPSHGPSRVLLSNIYADAGRWEDAFSIRKEM 650
++ + YA GR + A I E+
Sbjct: 460 ------TKTAMMTAYAQVGRIQKARLIFDEI 484
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 103/227 (45%), Gaps = 34/227 (14%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
+L + S L C A+ G+Q H+LIFK G ++ F+ NSLI +Y KCG
Sbjct: 687 QLTVTSLLSACGNLGAIKLGEQFHALIFKLGFDTFLFVGNSLITMYFKCG---------- 736
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
D VF++ P +++ ++++G AQN +EA+++
Sbjct: 737 ----------------------YEDGFCVFEEMPEHDLITWNAVLVGCAQNGLGKEAIKI 774
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWE-CRMLHGLVIKLMIDGFVIISTNLLNMYC 201
F M + G++P++++ V+ + H G + E + + K I V T ++++
Sbjct: 775 FEQMEVEGILPDQMSFLGVLCACSHAGLVDEGWAHFNSMTQKYGIMPLVYHYTCMVDLLG 834
Query: 202 VCSSLVEARSLFDEMKER-NIVSWNVMLNGFAKAGLVELARELFERI 247
L EA +L + M + + V W +L VEL + + ER+
Sbjct: 835 RAGYLSEAEALIENMPVKPDSVIWEALLGACRIHRNVELGQRVAERL 881
>gi|449520177|ref|XP_004167110.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Cucumis sativus]
Length = 797
Score = 359 bits (921), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 216/654 (33%), Positives = 338/654 (51%), Gaps = 26/654 (3%)
Query: 30 LRYCSAH--IAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTL 87
L+ CS + S + +H+ + SG + N L+ +Y K + A+ +F+
Sbjct: 18 LQLCSPQDPASFSLARAVHAHMIASGFKPRGHFLNRLLEMYCKSSNLVYARQLFEEIPNP 77
Query: 88 DPVACNIMISGYIRNDRLNDAREVFDKTPI--KCCVSYTSMIMGFAQNDCWREALEVFRD 145
D +A +I+ Y L RE+F+ TP+ + V Y +MI G+A N ALE+FR
Sbjct: 78 DAIARTTLITAYCALGNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRA 137
Query: 146 MRILGVIPNEVTLASVISSSV-HLGGIWECRMLHGLVIKLMIDGFVIISTNLLN------ 198
MR P++ T SV+S+ V +G +C +H V+K G +S+++LN
Sbjct: 138 MRRDDFRPDDFTFTSVLSALVLFVGNEQQCGQMHCAVVK---TGMGCVSSSVLNALLSVY 194
Query: 199 ------MYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDV 252
+ CS++V AR LFDEM +R+ ++W M+ G+ + + ARE+FE +
Sbjct: 195 VKRASELGISCSAMVSARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAMVENLG 254
Query: 253 VSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSI 312
+W MI GY+ EALT+ R M GI +D+ +ISAC +F G Q+H+
Sbjct: 255 AAWNAMISGYVHCGCFQEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQVHAY 314
Query: 313 IVKAGFDC-YDF---IQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGM 368
I+K + + F + +I Y +++ AR F +I +WNA+++G++ G
Sbjct: 315 ILKNELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYAMPVRNIITWNAILSGYVNAGR 374
Query: 369 IEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCA 428
+E+A+ F M +++ + + MISG AQN + L+LF M G +P + A
Sbjct: 375 MEEAKSFFEEMPVKNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTA 434
Query: 429 IASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVS 488
+ G L+ GR H +++ + ++ A+I MYAKCG + A VF + + +
Sbjct: 435 CSVLGALENGRQLHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVF--VTMPSVDLV 492
Query: 489 PWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSM 548
WN++I L HG ++++ + K + + ITF+ VL+ C HAGLV+ G YF SM
Sbjct: 493 SWNSMIAALGQHGHGVKAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSM 552
Query: 549 KSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEV 608
Y + P HY MVDL RAG A VI SMP K +W LLA RIHGN+++
Sbjct: 553 LESYGITPCEDHYARMVDLFCRAGMFSYARIVIDSMPSKPGAPVWEALLAGCRIHGNMDL 612
Query: 609 GERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
G AA+ L L P + + VLLSNIYAD GRW + +RK MRD +++ P S
Sbjct: 613 GIEAAEQLFKLMPQNDGTYVLLSNIYADVGRWNEVAKVRKLMRDQAVRKEPACS 666
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 93/371 (25%), Positives = 172/371 (46%), Gaps = 41/371 (11%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESN-TF---IQNSLINLYAKCGLISQAK 78
++ + + C+ + G+Q+H+ I K+ L N +F + N+LI LY K + +A+
Sbjct: 289 DITYTTIISACANVGSFQMGKQVHAYILKNELNPNHSFCLSVSNALITLYCKNNKVDEAR 348
Query: 79 SMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWRE 138
+F + + + N ++SGY+ R+ +A+ F++ P+K ++ T MI G AQN E
Sbjct: 349 KIFYAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGFGDE 408
Query: 139 ALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLN 198
L++F+ MR+ G P + A +++ LG + R LH ++ L + + + +++
Sbjct: 409 GLKLFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQLHAQLVHLGYESSLSVGNAMIS 468
Query: 199 MYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTM 258
MY C + A S+F M ++VSWN M+ + G A ELF++
Sbjct: 469 MYAKCGVVEAAESVFVTMPSVDLVSWNSMIAALGQHGHGVKAIELFDQ------------ 516
Query: 259 IDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQ-IHSIIVKAG 317
ML +G+ P+ + + +++AC A +G +S++ G
Sbjct: 517 -------------------MLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLESYG 557
Query: 318 FDCYDFIQATIIHFYAACGRINLARLQFE-LGIKDHIASWNALIAGFIRNGM----IEDA 372
+ A ++ + G + AR+ + + K W AL+AG +G IE A
Sbjct: 558 ITPCEDHYARMVDLFCRAGMFSYARIVIDSMPSKPGAPVWEALLAGCRIHGNMDLGIEAA 617
Query: 373 RQLFNNMQKRD 383
QLF M + D
Sbjct: 618 EQLFKLMPQND 628
>gi|449523792|ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 358 bits (920), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 203/635 (31%), Positives = 322/635 (50%), Gaps = 95/635 (14%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
L+ C + + +G++IH + + +N F ++N+YAKC
Sbjct: 154 LKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKC------------------ 195
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
+++DA ++FD+ P + VS+ ++I GF+QN ++ALE+ M+
Sbjct: 196 -------------RQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDE 242
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
G P+ +TL +V+ ++ +G + + +HG I+ V IST L +MY C S
Sbjct: 243 GQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGS---- 298
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLS 269
VE AR +F+ + K VVSW +M+DGY+Q
Sbjct: 299 ---------------------------VETARLIFDGMDQKTVVSWNSMMDGYVQNGEPE 331
Query: 270 EALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATII 329
+A+ ++ ML +GI P V I++ + AC G +H + + + ++I
Sbjct: 332 KAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLI 391
Query: 330 HFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSA 389
Y+ C R+++A +FNN+ R SW+A
Sbjct: 392 SMYSKCKRVDIAS-------------------------------DIFNNLNGRTHVSWNA 420
Query: 390 MISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNS 449
MI GYAQN + + AL F M G+KP+ TMVSV A+A + +W H ++ +
Sbjct: 421 MILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSC 480
Query: 450 ITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKI 509
+ N ++ A++DMY+KCG+I+ A ++F I DR V WNA+I G HG L +
Sbjct: 481 LDKNIFVTTALVDMYSKCGAIHMARKLFDMISDR--HVITWNAMIDGYGTHGLGRAALDL 538
Query: 510 YSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLG 569
+ ++K ++ N IT++ V+S C H+GLVD G R+FKSMK Y +EP + HYG MVDLLG
Sbjct: 539 FDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLG 598
Query: 570 RAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVL 629
RAG++++A + I +MP+ + ++G +L A +IH N+EVGE+AAK L L P G VL
Sbjct: 599 RAGRIKEAWDFIENMPISPGITVYGAMLGACKIHKNIEVGEKAAKKLFELNPDEGGYHVL 658
Query: 630 LSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
L+NIYA +W +RK M G+K+ PG S V
Sbjct: 659 LANIYASTSKWSKVAEVRKTMEKKGLKKTPGCSVV 693
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 158/331 (47%), Gaps = 39/331 (11%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+ ++ AL C+ + +G+ +H + + L S+ + NSLI++Y+KC + A +F++
Sbjct: 350 VTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNN 409
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
+ V+ N MI GY +N R++ EAL F
Sbjct: 410 LNGRTHVSWNAMILGYAQNGRVS-------------------------------EALNCF 438
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
+M+ LG+ P+ T+ SVI + L + +HGL+I+ +D + ++T L++MY C
Sbjct: 439 SEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKC 498
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDV----VSWGTMI 259
++ AR LFD + +R++++WN M++G+ GL A +LF+++ V +++ ++I
Sbjct: 499 GAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVI 558
Query: 260 DGYLQVERLSEALTMYRAMLCD-GIAPNDVMIVDLISACGRAMAFGEGLQ-IHSIIVKAG 317
+ E L +++M D G+ P+ ++ GRA E I ++ + G
Sbjct: 559 SACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIENMPISPG 618
Query: 318 FDCYD-FIQATIIHFYAACGRINLARLQFEL 347
Y + A IH G A+ FEL
Sbjct: 619 ITVYGAMLGACKIHKNIEVGE-KAAKKLFEL 648
Score = 38.9 bits (89), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 36/193 (18%), Positives = 81/193 (41%), Gaps = 4/193 (2%)
Query: 407 FHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAK 466
FH + + P+ + + ++KE V+ N + ++ +++K
Sbjct: 34 FHTLSERAHIPSHVYKHPAAVLLELCTSMKELHQIIPLVIKNGLYNEHLFQTKLVSLFSK 93
Query: 467 CGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFI 526
GSIN A VF I D+ ++ ++ ++ G A + L + ++K F
Sbjct: 94 YGSINEAARVFEPIDDKLDAL--YHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFT 151
Query: 527 GVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPM 586
+L C + G+ + + + ++ +V++ + Q++DA ++ MP
Sbjct: 152 YLLKVCGDNADLKRGKEIHGQLIT-NSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPE 210
Query: 587 KADVVIWGTLLAA 599
+ D+V W T++A
Sbjct: 211 R-DLVSWNTIIAG 222
>gi|15227199|ref|NP_179827.1| protein slow growth 1 [Arabidopsis thaliana]
gi|75206347|sp|Q9SJZ3.1|PP169_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g22410, mitochondrial; Flags: Precursor
gi|4544450|gb|AAD22358.1| hypothetical protein [Arabidopsis thaliana]
gi|18086349|gb|AAL57637.1| At2g22410/F14M13.19 [Arabidopsis thaliana]
gi|309260071|gb|ADO62711.1| SLOW GROWTH1 [Arabidopsis thaliana]
gi|330252206|gb|AEC07300.1| protein slow growth 1 [Arabidopsis thaliana]
Length = 681
Score = 358 bits (919), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 206/616 (33%), Positives = 333/616 (54%), Gaps = 46/616 (7%)
Query: 60 IQNSLINLYAKCGLISQAKS----MFDSCSTLDPVACNIMIS--GYIRNDRLNDAREVFD 113
+ N L++L KC L+ K M + LDP A + +I+ + L+ + ++
Sbjct: 52 LHNPLLSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILK 111
Query: 114 KTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVI---PNEVTLASVISSSVHLGG 170
S+ I GF++++ +E+ +++ M G P+ T + L
Sbjct: 112 GIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRL 171
Query: 171 IWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSW--NVML 228
M+ G V+KL ++ +VS N +
Sbjct: 172 SSLGHMILGHVLKLRLE---------------------------------LVSHVHNASI 198
Query: 229 NGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDV 288
+ FA G +E AR++F+ P +D+VSW +I+GY ++ +A+ +Y+ M +G+ P+DV
Sbjct: 199 HMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDV 258
Query: 289 MIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELG 348
++ L+S+C G + + + + G + ++ ++ CG I+ AR F+
Sbjct: 259 TMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNL 318
Query: 349 IKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFH 408
K I SW +I+G+ R G+++ +R+LF++M+++DV W+AMI G Q ++ AL LF
Sbjct: 319 EKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQ 378
Query: 409 GMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCG 468
M + KP+EITM+ A + G L G W H Y+ S++LN L +++DMYAKCG
Sbjct: 379 EMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCG 438
Query: 469 SINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGV 528
+I+ A VF+ I+ R + + AII GLA+HGDA+ + ++++ I + ITFIG+
Sbjct: 439 NISEALSVFHGIQTRNSLT--YTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGL 496
Query: 529 LSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKA 588
LS CCH G++ G YF MKS +N+ P LKHY MVDLLGRAG LE+A+ ++ SMPM+A
Sbjct: 497 LSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEA 556
Query: 589 DVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRK 648
D +WG LL R+HGNVE+GE+AAK L L PS VLL +Y +A WEDA R+
Sbjct: 557 DAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARR 616
Query: 649 EMRDCGMKRLPGFSGV 664
M + G++++PG S +
Sbjct: 617 MMNERGVEKIPGCSSI 632
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 123/488 (25%), Positives = 230/488 (47%), Gaps = 70/488 (14%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
+ C+ S G I + K LE + + N+ I+++A CG + A+ +FD D
Sbjct: 163 FKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDL 222
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
V+ N +I+GY + +G A+ +A+ V++ M
Sbjct: 223 VSWNCLINGYKK--------------------------IGEAE-----KAIYVYKLMESE 251
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
GV P++VT+ ++SS LG + + + V + + + + L++M+ C + EA
Sbjct: 252 GVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEA 311
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLS 269
R +FD +++R IVSW M++G+A+ GL++++R+LF+ + KDVV W MI G +Q +R
Sbjct: 312 RRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQ 371
Query: 270 EALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATII 329
+AL +++ M P+++ ++ +SAC + A G+ IH I K + +++
Sbjct: 372 DALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLV 431
Query: 330 HFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSA 389
YA CG I+ +A +F+ +Q R+ +++A
Sbjct: 432 DMYAKCGNIS-------------------------------EALSVFHGIQTRNSLTYTA 460
Query: 390 MISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYV--LN 447
+I G A + + A+ F+ M+DAG+ P+EIT + + A G ++ GR +Y +
Sbjct: 461 IIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGR---DYFSQMK 517
Query: 448 NSITLNDNLS--AAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANL 505
+ LN L + ++D+ + G + A + + + W A++ G MHG+ L
Sbjct: 518 SRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESM-PMEADAAVWGALLFGCRMHGNVEL 576
Query: 506 TLKIYSDL 513
K L
Sbjct: 577 GEKAAKKL 584
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 89/376 (23%), Positives = 175/376 (46%), Gaps = 70/376 (18%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
++ ++ + CS +++G++ + + ++GL + N+L+++++KCG I +A+ +FD
Sbjct: 257 DVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFD 316
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+ V+ MISGY R L+ +R++FD K V + +MI G Q ++AL +
Sbjct: 317 NLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALAL 376
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLG----GIWECRMLHGLVIKLMIDGFVIISTNLLN 198
F++M+ P+E+T+ +S+ LG GIW +H + K + V + T+L++
Sbjct: 377 FQEMQTSNTKPDEITMIHCLSACSQLGALDVGIW----IHRYIEKYSLSLNVALGTSLVD 432
Query: 199 MYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTM 258
MY C ++ EA S+F ++ RN +++ ++ G A G
Sbjct: 433 MYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHG----------------------- 469
Query: 259 IDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGF 318
S A++ + M+ GIAP+++ + L+SAC H +++ G
Sbjct: 470 --------DASTAISYFNEMIDAGIAPDEITFIGLLSAC-----------CHGGMIQTGR 510
Query: 319 DCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNN 378
D +F R NL + ++ ++ R G++E+A +L +
Sbjct: 511 D----------YFSQMKSRFNL---------NPQLKHYSIMVDLLGRAGLLEEADRLMES 551
Query: 379 MQ-KRDVYSWSAMISG 393
M + D W A++ G
Sbjct: 552 MPMEADAAVWGALLFG 567
>gi|347954514|gb|AEP33757.1| organelle transcript processing 82, partial [Aethionema
cordifolium]
Length = 679
Score = 357 bits (917), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 203/547 (37%), Positives = 302/547 (55%), Gaps = 37/547 (6%)
Query: 121 VSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGL 180
+S+ +MI G A + AL ++ M LG+ PN T + S E + +H
Sbjct: 44 LSWNTMIRGHALSSDPISALNLYVYMISLGLSPNSYTFPFLFKSCAKSKAAQEGKQIHAQ 103
Query: 181 VIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELA 240
++K + + + T+L++MY + +A +FD R++VS+ M+ G+A G ++ A
Sbjct: 104 ILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVSYTAMITGYASRGNMDKA 163
Query: 241 RELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRA 300
+++F+ IP KDVVSW MI GY ++ R EAL ++ M+ + P++ + ++S C +
Sbjct: 164 QKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKMDVKPDESTMATVLSTCTHS 223
Query: 301 MAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFE-LGIKDHIASWNAL 359
G QIHS I GF + +I Y+ CG + A FE L KD + SWN L
Sbjct: 224 GNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEMERAHGLFEGLQYKD-VISWNTL 282
Query: 360 IAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNE 419
I GYA AL +F M+ G PN+
Sbjct: 283 IG-------------------------------GYAYINHHKEALLVFQEMLKLGETPND 311
Query: 420 ITMVSVFCAIASSGTLKEGRWAHEYVLN--NSITLNDNLSAAIIDMYAKCGSINTAFEVF 477
+TM+S+ A A G + GRW H Y+ I N +L ++IDMYAKCG+I A +VF
Sbjct: 312 VTMLSILPACAHLGAIDIGRWIHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVF 371
Query: 478 YHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGL 537
I ++ S+S NA+I G AMHG A+ + S ++K I+ + ITF+G+LS C HAGL
Sbjct: 372 DTILNK--SLSSCNAMIFGFAMHGRADAAFDLLSRMKKDGIEPDDITFVGLLSACSHAGL 429
Query: 538 VDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLL 597
DLG + FKSM Y +EP L+HYGCM+DLLGR+G ++AEE+I SM M+ D VIWG+LL
Sbjct: 430 SDLGRKIFKSMTLDYRIEPKLEHYGCMIDLLGRSGLFKEAEELINSMTMEPDGVIWGSLL 489
Query: 598 AASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKR 657
A +IH N+E+GE A+ L ++P + S VLLSNIYA + RW+D +R + D G+K+
Sbjct: 490 KACKIHKNLELGELIAQKLMKIEPKNPGSYVLLSNIYATSARWDDVARVRTLLNDKGLKK 549
Query: 658 LPGFSGV 664
+PG S +
Sbjct: 550 VPGCSSI 556
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 146/569 (25%), Positives = 259/569 (45%), Gaps = 62/569 (10%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
+ C+ A +G+QIH+ I K GL + + SLI++YA+ G++ A +FD+ S D
Sbjct: 85 FKSCAKSKAAQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDV 144
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
V+ MI+GY ++ A+++FD+ PIK VS+ +MI G+A+ ++EALE+F +M +
Sbjct: 145 VSYTAMITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKM 204
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
V P+E T+A+V+S+ H G + R +H + + + L+++Y C + A
Sbjct: 205 DVKPDESTMATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEMERA 264
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLS 269
LF+ ++ ++++SWN T+I GY +
Sbjct: 265 HGLFEGLQYKDVISWN-------------------------------TLIGGYAYINHHK 293
Query: 270 EALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVK--AGFDCYDFIQAT 327
EAL +++ ML G PNDV ++ ++ AC A G IH I K G +Q +
Sbjct: 294 EALLVFQEMLKLGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGIITNTSLQTS 353
Query: 328 IIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQK----RD 383
+I YA CG I A F+ + ++S NA+I GF +G + A L + M+K D
Sbjct: 354 LIDMYAKCGNIEAANQVFDTILNKSLSSCNAMIFGFAMHGRADAAFDLLSRMKKDGIEPD 413
Query: 384 VYSWSAMISGYAQNEQPNMALELFHGM-VDAGVKPNEITMVSVFCAIASSGTLKEGRWAH 442
++ ++S + ++ ++F M +D ++P + + SG KE A
Sbjct: 414 DITFVGLLSACSHAGLSDLGRKIFKSMTLDYRIEPKLEHYGCMIDLLGRSGLFKE---AE 470
Query: 443 EYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGD 502
E + NS+T+ + I K I+ E+ I + + P N + +
Sbjct: 471 ELI--NSMTMEPD--GVIWGSLLKACKIHKNLELGELIAQKLMKIEPKNP--GSYVLLSN 524
Query: 503 ANLTLKIYSDLEKRNIKLNSITFIGV-------LSTCCHAGLVDLGERYFKSMKSVYNVE 555
T + D+ + LN V + + H L+ G+++ K +Y +
Sbjct: 525 IYATSARWDDVARVRTLLNDKGLKKVPGCSSIEIDSMVHEFLI--GDKFHPQNKEIYKML 582
Query: 556 PDLKHYGCMVDLLGRAGQLEDAEEVIRSM 584
++ LL G + D EV++ M
Sbjct: 583 EEID------SLLAETGFVSDTSEVLQEM 605
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 105/351 (29%), Positives = 179/351 (50%), Gaps = 5/351 (1%)
Query: 240 ARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGR 299
A +F+ I + +SW TMI G+ AL +Y M+ G++PN L +C +
Sbjct: 31 AISVFKSIQEPNQLSWNTMIRGHALSSDPISALNLYVYMISLGLSPNSYTFPFLFKSCAK 90
Query: 300 AMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNAL 359
+ A EG QIH+ I+K G + ++I YA G + A F+ + S+ A+
Sbjct: 91 SKAAQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVSYTAM 150
Query: 360 IAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNE 419
I G+ G ++ A+++F+ + +DV SW+AMISGYA+ + ALELF+ M+ VKP+E
Sbjct: 151 ITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKMDVKPDE 210
Query: 420 ITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYH 479
TM +V SG ++ GR H ++ N+ N L A+ID+Y+KCG + A +F
Sbjct: 211 STMATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEMERAHGLFEG 270
Query: 480 IRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVD 539
++ + V WN +I G A L ++ ++ K N +T + +L C H G +D
Sbjct: 271 LQYK--DVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSILPACAHLGAID 328
Query: 540 LGERYFKSM--KSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKA 588
+G R+ K + + + ++D+ + G +E A +V ++ K+
Sbjct: 329 IG-RWIHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKS 378
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/375 (25%), Positives = 156/375 (41%), Gaps = 97/375 (25%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E + + L C+ V G+QIHS I G SN + N+LI+LY+KCG + +A +F+
Sbjct: 210 ESTMATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEMERAHGLFE 269
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
D ++ N +I GY A + +EAL V
Sbjct: 270 GLQYKDVISWNTLIGGY-------------------------------AYINHHKEALLV 298
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVI---ISTNLLNM 199
F++M LG PN+VT+ S++ + HLG I R +H + I + G + + T+L++M
Sbjct: 299 FQEMLKLGETPNDVTMLSILPACAHLGAIDIGRWIH-VYIDKKLKGIITNTSLQTSLIDM 357
Query: 200 YCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMI 259
Y C ++ A +FD + +++ S N M+ GFA G + A +L R
Sbjct: 358 YAKCGNIEAANQVFDTILNKSLSSCNAMIFGFAMHGRADAAFDLLSR------------- 404
Query: 260 DGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFD 319
M DGI P+D+ V L+SAC A GL
Sbjct: 405 ------------------MKKDGIEPDDITFVGLLSACSHA-----GL------------ 429
Query: 320 CYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNM 379
+ GR + + I+ + + +I R+G+ ++A +L N+M
Sbjct: 430 -------------SDLGRKIFKSMTLDYRIEPKLEHYGCMIDLLGRSGLFKEAEELINSM 476
Query: 380 Q-KRDVYSWSAMISG 393
+ D W +++
Sbjct: 477 TMEPDGVIWGSLLKA 491
>gi|115452665|ref|NP_001049933.1| Os03g0314400 [Oryza sativa Japonica Group]
gi|108707812|gb|ABF95607.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113548404|dbj|BAF11847.1| Os03g0314400 [Oryza sativa Japonica Group]
gi|125586044|gb|EAZ26708.1| hypothetical protein OsJ_10614 [Oryza sativa Japonica Group]
Length = 648
Score = 357 bits (916), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 216/657 (32%), Positives = 339/657 (51%), Gaps = 72/657 (10%)
Query: 44 QIHSLIFKSGLESNTFIQNSLINLYAKCGLIS----QAKSMFDSCSTLDPVACNIMISGY 99
QIH+ SGL ++ F + LI L+ + + + +CN++
Sbjct: 22 QIHAQFVASGLLADAFAASRLILFTTSTRLLPLPFHHSLRLLHVVHRPNAFSCNMV---- 77
Query: 100 IRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLA 159
L ARE P C Y SM A DC+ + LA
Sbjct: 78 -----LKAARE--HGLPHLCLPLYASMS---AAPDCYTHTI-----------------LA 110
Query: 160 SVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKER 219
+ ++ I E R +H ++ + ++ L++MY C L +AR +FD
Sbjct: 111 AACATR---RAIEEGRQVHCHAVRHGFGRNLYLANALMSMYSACGCLGDARKVFDAGPVW 167
Query: 220 NIVSWNVMLNGFAKA-------------------------------GLVELARELFERIP 248
+ VSWN +L + +A G+V+ AR++F+ +
Sbjct: 168 DAVSWNTILAAYVQAEDVDQAVGVFARMPERGAAAVSSMVSLFGRRGMVDEARKVFDVVE 227
Query: 249 SKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQ 308
KDV +W MI + + + +EAL ++ M +G ++ ++V +++AC R G
Sbjct: 228 RKDVFTWTAMISCFQRNGKFAEALALFSDMRGEGWPVDEAVMVCVVAACARLEVTRNGEM 287
Query: 309 IHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGM 368
H + +AG +Q +IH Y++ + AR F+ G SWN++IAG+++NG
Sbjct: 288 CHGLAFRAGLGSRLNVQNALIHMYSSFLNVVAARRLFDSGQCLDQFSWNSMIAGYLKNGS 347
Query: 369 IEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCA 428
++DA++LF M +D SW+ MISG QN+Q + AL +F+ M G+KP+E+T+VSV A
Sbjct: 348 VKDAKELFTVMPDKDNVSWTTMISGCVQNDQSSEALTIFNNMQAQGIKPDEVTLVSVISA 407
Query: 429 IASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVS 488
+ +L++G+ HEY+ + T+ L ++IDMY KCG + +A EVF + +R T
Sbjct: 408 CTNMSSLEQGKSMHEYIREHQYTITVILGTSLIDMYMKCGCLESALEVFDTMEERGTPC- 466
Query: 489 PWNAIICGLAMHGDANLTLKIYSDLEKRNIKL-NSITFIGVLSTCCHAGLVDLGERYFKS 547
WNA+I GLAM+G +L ++S++E + N ITF GVLS C HAGLV+ G+ +FK
Sbjct: 467 -WNAVIVGLAMNGLVMKSLDMFSEMESSSTATPNEITFTGVLSACRHAGLVEEGQHFFKL 525
Query: 548 MKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVE 607
M+ Y++ P+++HYGCMVDLLGRAG +++AE +I SMPM DV WG LL + HG+ E
Sbjct: 526 MQHKYHIIPNIRHYGCMVDLLGRAGYVKEAENLIESMPMSPDVPAWGALLGSCWKHGDNE 585
Query: 608 VGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
VGER + L L P H +LSNIYA G W+ +R M+ + ++PG S V
Sbjct: 586 VGERVGRKLVNLDPHHDGFHTMLSNIYASEGMWQHVKDLRGSMKQWHVPKIPGSSVV 642
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 113/429 (26%), Positives = 193/429 (44%), Gaps = 67/429 (15%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E +V + C+ G+ H L F++GL S +QN+LI++Y+ + A+ +FD
Sbjct: 266 EAVMVCVVAACARLEVTRNGEMCHGLAFRAGLGSRLNVQNALIHMYSSFLNVVAARRLFD 325
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
S LD + N MI+GY++N + DA+E+F P K VS+T+MI G QND EAL +
Sbjct: 326 SGQCLDQFSWNSMIAGYLKNGSVKDAKELFTVMPDKDNVSWTTMISGCVQNDQSSEALTI 385
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
F +M+ G+ P+EVTL SVIS+ ++ + + + +H + + VI+ T+L++MY
Sbjct: 386 FNNMQAQGIKPDEVTLVSVISACTNMSSLEQGKSMHEYIREHQYTITVILGTSLIDMYMK 445
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
C L A +FD M+ER WN ++ G A GLV + ++F + S +
Sbjct: 446 CGCLESALEVFDTMEERGTPCWNAVIVGLAMNGLVMKSLDMFSEMESSSTAT-------- 497
Query: 263 LQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD 322
PN++ ++SAC A EG
Sbjct: 498 ----------------------PNEITFTGVLSACRHAGLVEEGQ--------------- 520
Query: 323 FIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ-K 381
HF+ +Q + I +I + ++ R G +++A L +M
Sbjct: 521 -------HFFKL--------MQHKYHIIPNIRHYGCMVDLLGRAGYVKEAENLIESMPMS 565
Query: 382 RDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWA 441
DV +W A++ ++ + + +V+ + P+ ++ I +S EG W
Sbjct: 566 PDVPAWGALLGSCWKHGDNEVGERVGRKLVN--LDPHHDGFHTMLSNIYAS----EGMWQ 619
Query: 442 HEYVLNNSI 450
H L S+
Sbjct: 620 HVKDLRGSM 628
>gi|125543615|gb|EAY89754.1| hypothetical protein OsI_11297 [Oryza sativa Indica Group]
Length = 648
Score = 357 bits (916), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 216/657 (32%), Positives = 339/657 (51%), Gaps = 72/657 (10%)
Query: 44 QIHSLIFKSGLESNTFIQNSLINLYAKCGLIS----QAKSMFDSCSTLDPVACNIMISGY 99
QIH+ SGL ++ F + LI L+ + + + +CN++
Sbjct: 22 QIHAQFVASGLLADAFAASRLILFTTSTRLLPLPFHHSLRLLHVVHRPNAFSCNMV---- 77
Query: 100 IRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLA 159
L ARE P C Y SM A DC+ + LA
Sbjct: 78 -----LKAARE--HGLPHLCLPLYASMS---AAPDCYTHTI-----------------LA 110
Query: 160 SVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKER 219
+ ++ I E R +H ++ + ++ L++MY C L +AR +FD
Sbjct: 111 AACATR---RAIEEGRQVHCHAVRHGFGRNLYLANALMSMYSACGCLGDARKVFDAGPVW 167
Query: 220 NIVSWNVMLNGFAKA-------------------------------GLVELARELFERIP 248
+ VSWN +L + +A G+V+ AR++F+ +
Sbjct: 168 DAVSWNTILAAYVQAEDVDQAVGVFARMPERGAAAVSSMVSLFGRRGMVDEARKVFDGVE 227
Query: 249 SKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQ 308
KDV +W MI + + + +EAL ++ M +G ++ ++V +++AC R G
Sbjct: 228 RKDVFTWTAMISCFQRNGKFAEALALFSDMRGEGWPVDEAVMVCVVAACARLEVTRNGEM 287
Query: 309 IHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGM 368
H + +AG +Q +IH Y++ + AR F+ G SWN++IAG+++NG
Sbjct: 288 CHGLAFRAGLGSRLNVQNALIHMYSSFLNVVAARRLFDSGQCLDQFSWNSMIAGYLKNGS 347
Query: 369 IEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCA 428
++DA++LF M +D SW+ MISG QN+Q + AL +F+ M G+KP+E+T+VSV A
Sbjct: 348 VKDAKELFTVMPDKDNVSWTTMISGCVQNDQSSEALTIFNNMQAQGIKPDEVTLVSVISA 407
Query: 429 IASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVS 488
+ +L++G+ HEY+ + T+ L ++IDMY KCG + +A EVF + +R T
Sbjct: 408 CTNMSSLEQGKSMHEYIREHQYTITVILGTSLIDMYMKCGCLESALEVFDTMEERGTPC- 466
Query: 489 PWNAIICGLAMHGDANLTLKIYSDLEKRNIKL-NSITFIGVLSTCCHAGLVDLGERYFKS 547
WNA+I GLAM+G +L ++S++E + N ITF GVLS C HAGLV+ G+ +FK
Sbjct: 467 -WNAVIVGLAMNGLVMKSLDMFSEMESSSTATPNEITFTGVLSACRHAGLVEEGQHFFKL 525
Query: 548 MKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVE 607
M+ Y++ P+++HYGCMVDLLGRAG +++AE +I SMPM DV WG LL + HG+ E
Sbjct: 526 MQHKYHIIPNIRHYGCMVDLLGRAGYVKEAENLIESMPMSPDVPAWGALLGSCWKHGDNE 585
Query: 608 VGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
VGER + L L P H +LSNIYA G W+ +R M+ + ++PG S V
Sbjct: 586 VGERVGRKLVNLDPHHDGFHTMLSNIYASEGMWQHVKDLRGSMKQWHVPKIPGSSVV 642
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 113/429 (26%), Positives = 193/429 (44%), Gaps = 67/429 (15%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E +V + C+ G+ H L F++GL S +QN+LI++Y+ + A+ +FD
Sbjct: 266 EAVMVCVVAACARLEVTRNGEMCHGLAFRAGLGSRLNVQNALIHMYSSFLNVVAARRLFD 325
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
S LD + N MI+GY++N + DA+E+F P K VS+T+MI G QND EAL +
Sbjct: 326 SGQCLDQFSWNSMIAGYLKNGSVKDAKELFTVMPDKDNVSWTTMISGCVQNDQSSEALTI 385
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
F +M+ G+ P+EVTL SVIS+ ++ + + + +H + + VI+ T+L++MY
Sbjct: 386 FNNMQAQGIKPDEVTLVSVISACTNMSSLEQGKSMHEYIREHQYTITVILGTSLIDMYMK 445
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
C L A +FD M+ER WN ++ G A GLV + ++F + S +
Sbjct: 446 CGCLESALEVFDTMEERGTPCWNAVIVGLAMNGLVMKSLDMFSEMESSSTAT-------- 497
Query: 263 LQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD 322
PN++ ++SAC A EG
Sbjct: 498 ----------------------PNEITFTGVLSACRHAGLVEEGQ--------------- 520
Query: 323 FIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ-K 381
HF+ +Q + I +I + ++ R G +++A L +M
Sbjct: 521 -------HFFKL--------MQHKYHIIPNIRHYGCMVDLLGRAGYVKEAENLIESMPMS 565
Query: 382 RDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWA 441
DV +W A++ ++ + + +V+ + P+ ++ I +S EG W
Sbjct: 566 PDVPAWGALLGSCWKHGDNEVGERVGRKLVN--LDPHHDGFHTMLSNIYAS----EGMWQ 619
Query: 442 HEYVLNNSI 450
H L S+
Sbjct: 620 HVKDLRGSM 628
>gi|224125684|ref|XP_002319650.1| predicted protein [Populus trichocarpa]
gi|222858026|gb|EEE95573.1| predicted protein [Populus trichocarpa]
Length = 705
Score = 357 bits (915), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 191/528 (36%), Positives = 288/528 (54%), Gaps = 42/528 (7%)
Query: 137 REALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNL 196
R AL + MR L + + + SV+ + + + +HG +K + V + L
Sbjct: 91 RYALNTYTYMRKLDIEVDSFIIPSVLKACSQISVARMGKEIHGFSVKNGLVSDVFVVNAL 150
Query: 197 LNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWG 256
+ MY C SLV AR LFD+M ER++VSW+ M+ + LF + +VSW
Sbjct: 151 MQMYSECGSLVSARLLFDKMSERDVVSWSTMIRAYIT---------LFYGFSQRSIVSWT 201
Query: 257 TMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKA 316
MI GY++ L E ++ M+ + + PND+ ++ LI +CG A G ++H+ I++
Sbjct: 202 AMIAGYIRCNDLEEGERLFVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRN 261
Query: 317 GFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLF 376
GF + ++ Y CG I AR +F
Sbjct: 262 GFGMSLALATALVDMYGKCGEI-------------------------------RSARAIF 290
Query: 377 NNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLK 436
++M+ +DV +W+AMIS YAQ + A +LF M D GV+PNE+TMVS+ A +G L
Sbjct: 291 DSMKNKDVMTWTAMISAYAQANCIDYAFQLFVQMRDNGVRPNELTMVSLLSLCAVNGALD 350
Query: 437 EGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICG 496
G+W H Y+ + ++ L A+IDMYAKCG I+ A +F DR + WN ++ G
Sbjct: 351 MGKWFHAYIDKQGVEVDVILKTALIDMYAKCGDISGAQRLFSEAIDR--DICTWNVMMAG 408
Query: 497 LAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEP 556
MHG LK+++++E +K N ITFIG L C HAGLV G+ F+ M + + P
Sbjct: 409 YGMHGYGEKALKLFTEMETLGVKPNDITFIGALHACSHAGLVVEGKGLFEKMIHDFGLVP 468
Query: 557 DLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSL 616
++HYGCMVDLLGRAG L++A ++I SMP+ ++ IWG +LAA +IH N +GE AA+ L
Sbjct: 469 KVEHYGCMVDLLGRAGLLDEAYKMIESMPVTPNIAIWGAMLAACKIHKNSNMGELAAREL 528
Query: 617 AGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
L+P + +VL+SNIYA A RW D +RK ++D G+K+ PG S +
Sbjct: 529 LALEPQNCGYKVLMSNIYAAANRWNDVAGMRKAVKDTGIKKEPGMSSI 576
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 119/479 (24%), Positives = 224/479 (46%), Gaps = 73/479 (15%)
Query: 28 SALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTL 87
S L+ CS G++IH K+GL S+ F+ N+L+ +Y++CG + A+ +FD S
Sbjct: 114 SVLKACSQISVARMGKEIHGFSVKNGLVSDVFVVNALMQMYSECGSLVSARLLFDKMSER 173
Query: 88 DPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMR 147
D V+ + MI YI +F + VS+T+MI G+ + + E +F M
Sbjct: 174 DVVSWSTMIRAYI---------TLFYGFSQRSIVSWTAMIAGYIRCNDLEEGERLFVRMI 224
Query: 148 ILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLV 207
V PN++T+ S+I S +G + + LH +++ + ++T L++MY C +
Sbjct: 225 EENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRNGFGMSLALATALVDMYGKCGEIR 284
Query: 208 EARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVER 267
AR++FD MK +++++W M++ +A+A ++ A +LF +
Sbjct: 285 SARAIFDSMKNKDVMTWTAMISAYAQANCIDYAFQLFVQ--------------------- 323
Query: 268 LSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQAT 327
M +G+ PN++ +V L+S C A G H+ I K G + ++
Sbjct: 324 ----------MRDNGVRPNELTMVSLLSLCAVNGALDMGKWFHAYIDKQGVEVDVILKTA 373
Query: 328 IIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSW 387
+I YA CG I+ A+ F I I +WN ++AG+ +G E A +LF M+
Sbjct: 374 LIDMYAKCGDISGAQRLFSEAIDRDICTWNVMMAGYGMHGYGEKALKLFTEMET------ 427
Query: 388 SAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLN 447
GVKPN+IT + A + +G + EG+ E +++
Sbjct: 428 -------------------------LGVKPNDITFIGALHACSHAGLVVEGKGLFEKMIH 462
Query: 448 N-SITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANL 505
+ + ++D+ + G ++ A+++ + T +++ W A++ +H ++N+
Sbjct: 463 DFGLVPKVEHYGCMVDLLGRAGLLDEAYKMIESM-PVTPNIAIWGAMLAACKIHKNSNM 520
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 88/382 (23%), Positives = 163/382 (42%), Gaps = 93/382 (24%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
++ ++S + C AV G+++H+ I ++G + + +L+++Y KCG I A+++FD
Sbjct: 232 DITMLSLIISCGFVGAVQLGKRLHAYILRNGFGMSLALATALVDMYGKCGEIRSARAIFD 291
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
S D +++T+MI +AQ +C A ++
Sbjct: 292 SMKNKD-------------------------------VMTWTAMISAYAQANCIDYAFQL 320
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
F MR GV PNE+T+ S++S G + + H + K ++ VI+ T L++MY
Sbjct: 321 FVQMRDNGVRPNELTMVSLLSLCAVNGALDMGKWFHAYIDKQGVEVDVILKTALIDMYAK 380
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
C + A+ LF E +R+I +WNVM+ G+ G E A +LF
Sbjct: 381 CGDISGAQRLFSEAIDRDICTWNVMMAGYGMHGYGEKALKLFT----------------- 423
Query: 263 LQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD 322
++E L G+ PND+ + + AC A EG K F+
Sbjct: 424 -EMETL-------------GVKPNDITFIGALHACSHAGLVVEG--------KGLFE--- 458
Query: 323 FIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ-K 381
+IH + G+ + + ++ R G++++A ++ +M
Sbjct: 459 ----KMIH---------------DFGLVPKVEHYGCMVDLLGRAGLLDEAYKMIESMPVT 499
Query: 382 RDVYSWSAMISGYAQNEQPNMA 403
++ W AM++ ++ NM
Sbjct: 500 PNIAIWGAMLAACKIHKNSNMG 521
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/255 (20%), Positives = 109/255 (42%), Gaps = 24/255 (9%)
Query: 366 NGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSV 425
N + D Q + R ++ + +S P AL + M ++ + + SV
Sbjct: 56 NHLCLDQTQQLHAHITRTHFNHAQQVSFSPFESHPRYALNTYTYMRKLDIEVDSFIIPSV 115
Query: 426 FCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTT 485
A + + G+ H + + N + + + A++ MY++CGS+ +A +F + +R
Sbjct: 116 LKACSQISVARMGKEIHGFSVKNGLVSDVFVVNALMQMYSECGSLVSARLLFDKMSERDV 175
Query: 486 --------------------SVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITF 525
S+ W A+I G D +++ + + N+ N IT
Sbjct: 176 VSWSTMIRAYITLFYGFSQRSIVSWTAMIAGYIRCNDLEEGERLFVRMIEENVFPNDITM 235
Query: 526 IGVLSTCCHAGLVDLGERYFKS-MKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSM 584
+ ++ +C G V LG+R +++ + + L +VD+ G+ G++ A + SM
Sbjct: 236 LSLIISCGFVGAVQLGKRLHAYILRNGFGMSLALA--TALVDMYGKCGEIRSARAIFDSM 293
Query: 585 PMKADVVIWGTLLAA 599
K DV+ W +++A
Sbjct: 294 KNK-DVMTWTAMISA 307
>gi|225425182|ref|XP_002264325.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600
[Vitis vinifera]
Length = 684
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 211/627 (33%), Positives = 329/627 (52%), Gaps = 41/627 (6%)
Query: 45 IHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDR 104
+H+ I + FIQN LI++Y KC + A+ +FD + N +IS ++
Sbjct: 37 VHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARKLFDRMPQRNTFTWNSLISVLTKSGF 96
Query: 105 LNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISS 164
L++A +F P S+ SM+ GFAQ+D + E+LE F M + NE + S +S+
Sbjct: 97 LDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESLEYFVKMHREDFLLNEYSFGSALSA 156
Query: 165 SVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSW 224
L + +H LV K V + + L++MY C S+ A +F
Sbjct: 157 CAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMYSKCGSVACAEEVF----------- 205
Query: 225 NVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIA 284
+G++E +++V+W ++I Y Q SEAL ++ M+ G+
Sbjct: 206 ---------SGMIE-----------RNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLE 245
Query: 285 PNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQAT-IIHFYAACGRINLARL 343
P++V + ++SAC A EGLQIH+ +VK D + ++ YA C ++N AR
Sbjct: 246 PDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARR 305
Query: 344 QFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMA 403
F+ ++ S ++++G+ R ++ AR +F+ M +R+V SW+A+I+GY QN + A
Sbjct: 306 VFDRMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEA 365
Query: 404 LELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSA----- 458
L LF + + P T ++ A A+ L GR AH +VL +
Sbjct: 366 LRLFRLLKRESIWPTHYTFGNLLSACANLADLLLGRQAHTHVLKQGFEFQSGAESDIFVG 425
Query: 459 -AIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRN 517
++IDMY KCGSI VF +++R WNAII G A +G L+I+ +
Sbjct: 426 NSLIDMYMKCGSIEDGSRVFEKMKER--DCVSWNAIIVGYAQNGYGAEALQIFRKMLVCG 483
Query: 518 IKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDA 577
K + +T IGVL C HAGLV+ G YF SM+ + + P HY CMVDLLGRAG L +A
Sbjct: 484 EKPDHVTMIGVLCACSHAGLVEEGRHYFFSMEE-HGLIPLKDHYTCMVDLLGRAGCLNEA 542
Query: 578 EEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADA 637
+ +I +MP+ D V+WG+LLAA ++HGN+E+G+ AA+ L + P + VLLSN+YA+
Sbjct: 543 KNLIEAMPVNPDAVVWGSLLAACKVHGNIEMGKHAAEKLLEIDPWNSGPYVLLSNMYAEL 602
Query: 638 GRWEDAFSIRKEMRDCGMKRLPGFSGV 664
GRW D +RK MR G+ + PG S +
Sbjct: 603 GRWGDVVRVRKLMRQQGVTKQPGCSWI 629
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 141/491 (28%), Positives = 235/491 (47%), Gaps = 72/491 (14%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E + SAL C+ + ++ G Q+H+L+ KS ++ ++ ++LI++Y+KCG
Sbjct: 147 EYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMYSKCG---------- 196
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
VAC A EVF + V++ S+I + QN EALEV
Sbjct: 197 ------SVAC---------------AEEVFSGMIERNLVTWNSLITCYEQNGPASEALEV 235
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKL-MIDGFVIISTNLLNMYC 201
F M G+ P+EVTLASV+S+ L + E +H V+K +++ L++MY
Sbjct: 236 FVRMMDSGLEPDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYA 295
Query: 202 VCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDG 261
CS + EAR +FD M RN+VS M++G+A+A V+ AR +F ++ ++VVSW +I G
Sbjct: 296 KCSKVNEARRVFDRMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAG 355
Query: 262 YLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCY 321
Y Q EAL ++R + + I P +L+SAC G Q H+ ++K GF+
Sbjct: 356 YTQNGENEEALRLFRLLKRESIWPTHYTFGNLLSACANLADLLLGRQAHTHVLKQGFEFQ 415
Query: 322 D------FIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQL 375
F+ ++I Y CG I FE + SWNA+I G+ +NG +
Sbjct: 416 SGAESDIFVGNSLIDMYMKCGSIEDGSRVFEKMKERDCVSWNAIIVGYAQNGYGAE---- 471
Query: 376 FNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTL 435
AL++F M+ G KP+ +TM+ V CA + +G +
Sbjct: 472 ---------------------------ALQIFRKMLVCGEKPDHVTMIGVLCACSHAGLV 504
Query: 436 KEGR-WAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAII 494
+EGR + + I L D+ + ++D+ + G +N A + + +V W +++
Sbjct: 505 EEGRHYFFSMEEHGLIPLKDHYT-CMVDLLGRAGCLNEAKNLIEAMPVNPDAVV-WGSLL 562
Query: 495 CGLAMHGDANL 505
+HG+ +
Sbjct: 563 AACKVHGNIEM 573
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 125/488 (25%), Positives = 217/488 (44%), Gaps = 67/488 (13%)
Query: 152 IPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARS 211
+PN A ++ S + R++H ++ + I L+++Y C L +AR
Sbjct: 12 LPNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARK 71
Query: 212 LFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEA 271
LFD M +RN +WN +++ K+G ++ A LF +P D SW +M+ G+ Q +R E+
Sbjct: 72 LFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEES 131
Query: 272 LTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHF 331
L + M + N+ +SAC M G Q+H+++ K+ + ++ + +I
Sbjct: 132 LEYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDM 191
Query: 332 YAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMI 391
Y+ CG + A F I+ ++ +WN+LI
Sbjct: 192 YSKCGSVACAEEVFSGMIERNLVTWNSLI------------------------------- 220
Query: 392 SGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSIT 451
+ Y QN + ALE+F M+D+G++P+E+T+ SV A AS LKEG H V+ +
Sbjct: 221 TCYEQNGPASEALEVFVRMMDSGLEPDEVTLASVVSACASLCALKEGLQIHARVVKTNKF 280
Query: 452 LND-NLSAAIIDMYAKCGSINTAFEVFYHIRDRTT------------------------- 485
+D L A++DMYAKC +N A VF + R
Sbjct: 281 RDDLVLGNALVDMYAKCSKVNEARRVFDRMSIRNVVSETSMVSGYARAASVKAARFMFSK 340
Query: 486 ----SVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLG 541
+V WNA+I G +G+ L+++ L++ +I TF +LS C + + LG
Sbjct: 341 MTQRNVVSWNALIAGYTQNGENEEALRLFRLLKRESIWPTHYTFGNLLSACANLADLLLG 400
Query: 542 ER-YFKSMKSVYN----VEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTL 596
+ + +K + E D+ ++D+ + G +ED V M + D V W +
Sbjct: 401 RQAHTHVLKQGFEFQSGAESDIFVGNSLIDMYMKCGSIEDGSRVFEKMKER-DCVSWNAI 459
Query: 597 LAASRIHG 604
+ +G
Sbjct: 460 IVGYAQNG 467
>gi|225425015|ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930 [Vitis vinifera]
gi|297738214|emb|CBI27415.3| unnamed protein product [Vitis vinifera]
Length = 743
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 202/638 (31%), Positives = 342/638 (53%), Gaps = 38/638 (5%)
Query: 28 SALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTL 87
S L+ C +Q +++H LI K+ + TF+ N+LI Y K G ++ A +FD
Sbjct: 10 SLLKLCCESQNQTQAKKLHCLILKTIKQPETFLSNNLITAYYKLGNLAYAHHVFDHIPQP 69
Query: 88 DPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDM- 146
+ + N ++S Y + L+ +++F+ P + VS+ I G+A +A+ V++ M
Sbjct: 70 NLFSWNTILSVYSKLGLLSQMQQIFNLMPFRDGVSWNLAISGYANYGSCSDAVRVYKLML 129
Query: 147 RILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSL 206
+ + N +T ++++ + R ++G ++K V + + L++MY +
Sbjct: 130 KDAAMNLNRITFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSPLVDMYTKLGLI 189
Query: 207 VEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVE 266
+A+ FDEM ERN+V N M+ G + G++E ++ LF + +D +SW MI G +Q
Sbjct: 190 YDAKRYFDEMPERNVVMCNTMITGLMRCGMIEESQRLFCGLKERDSISWTIMITGLMQNG 249
Query: 267 RLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQA 326
EAL M+R M G A + +++ACG +A GEG QIH+ +++ F+ +
Sbjct: 250 LEREALDMFREMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDHKDNVFVGS 309
Query: 327 TIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYS 386
++ Y+ C I + A +F M +++V S
Sbjct: 310 ALVDMYSKCRSI-------------------------------KSAETVFKRMPQKNVIS 338
Query: 387 WSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVL 446
W+AM+ GY QN A+++F M GV+P++ T+ SV + A+ +L+EG H L
Sbjct: 339 WTAMLVGYGQNGFSEEAVKIFFEMQRNGVEPDDFTLGSVISSCANLASLEEGAQFHCRAL 398
Query: 447 NNSITLNDNLSAAIIDMYAKCGSINTAFEVF--YHIRDRTTSVSPWNAIICGLAMHGDAN 504
+ + +S A+I +Y KCGS + +F +IRD + W A++ G A G AN
Sbjct: 399 VSGLISFITVSNALITLYGKCGSTENSHRLFTEMNIRDEVS----WTALLAGYAQFGKAN 454
Query: 505 LTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCM 564
T+ ++ + +K + +TFIGVLS C AGLV+ G +YF+SM + + P + H C+
Sbjct: 455 ETIGLFERMLAHGLKPDGVTFIGVLSACSRAGLVEKGLQYFESMIKEHGIMPIVDHCTCI 514
Query: 565 VDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHG 624
+DLLGRAG+LE+A I +MP DVV W TLL++ R+HG++E+G+ AA SL L+P +
Sbjct: 515 IDLLGRAGRLEEARNFINNMPCHPDVVGWATLLSSCRVHGDMEIGKWAADSLIALEPQNP 574
Query: 625 PSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
S VLLS++YA G+W+ +R+ MRD +++ PG+S
Sbjct: 575 ASYVLLSSLYASKGKWDKVAQLRRGMRDKRVRKEPGYS 612
Score = 188 bits (478), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 128/485 (26%), Positives = 219/485 (45%), Gaps = 66/485 (13%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
+ + L CS V G+QI+ I K G S+ F+ + L+++Y K GLI AK FD
Sbjct: 138 RITFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSPLVDMYTKLGLIYDAKRYFD 197
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+ V CN MI+G +R + +++ +F + +S+T MI G QN REAL++
Sbjct: 198 EMPERNVVMCNTMITGLMRCGMIEESQRLFCGLKERDSISWTIMITGLMQNGLEREALDM 257
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
FR+MR+ G ++ T SV+++ L + E + +H VI+ V + + L++MY
Sbjct: 258 FREMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDHKDNVFVGSALVDMYSK 317
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
C S+ A ++F M ++N++SW ML G+ + G E
Sbjct: 318 CRSIKSAETVFKRMPQKNVISWTAMLVGYGQNGFSE------------------------ 353
Query: 263 LQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD 322
EA+ ++ M +G+ P+D + +IS+C + EG Q H + +G +
Sbjct: 354 -------EAVKIFFEMQRNGVEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFI 406
Query: 323 FIQATIIHFYAACGRI-NLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQK 381
+ +I Y CG N RL E+ I+D + SW AL+A
Sbjct: 407 TVSNALITLYGKCGSTENSHRLFTEMNIRDEV-SWTALLA-------------------- 445
Query: 382 RDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG-RW 440
GYAQ + N + LF M+ G+KP+ +T + V A + +G +++G ++
Sbjct: 446 -----------GYAQFGKANETIGLFERMLAHGLKPDGVTFIGVLSACSRAGLVEKGLQY 494
Query: 441 AHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMH 500
+ + I + IID+ + G + A F + V W ++ +H
Sbjct: 495 FESMIKEHGIMPIVDHCTCIIDLLGRAGRLEEA-RNFINNMPCHPDVVGWATLLSSCRVH 553
Query: 501 GDANL 505
GD +
Sbjct: 554 GDMEI 558
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/234 (21%), Positives = 95/234 (40%), Gaps = 35/234 (14%)
Query: 10 FNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYA 69
F Q+ ++ D+ L S + C+ ++ +G Q H SGL S + N+LI LY
Sbjct: 360 FEMQRNGVEPDDFTLG--SVISSCANLASLEEGAQFHCRALVSGLISFITVSNALITLYG 417
Query: 70 KCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMG 129
KCG + +F + D V+ +++GY + + N
Sbjct: 418 KCGSTENSHRLFTEMNIRDEVSWTALLAGYAQFGKAN----------------------- 454
Query: 130 FAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWE-CRMLHGLVIKLMIDG 188
E + +F M G+ P+ VT V+S+ G + + + ++ + I
Sbjct: 455 --------ETIGLFERMLAHGLKPDGVTFIGVLSACSRAGLVEKGLQYFESMIKEHGIMP 506
Query: 189 FVIISTNLLNMYCVCSSLVEARSLFDEMK-ERNIVSWNVMLNGFAKAGLVELAR 241
V T ++++ L EAR+ + M ++V W +L+ G +E+ +
Sbjct: 507 IVDHCTCIIDLLGRAGRLEEARNFINNMPCHPDVVGWATLLSSCRVHGDMEIGK 560
>gi|359495784|ref|XP_003635090.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 616
Score = 356 bits (913), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 204/560 (36%), Positives = 311/560 (55%), Gaps = 33/560 (5%)
Query: 105 LNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISS 164
L A+ +FD+ P Y S+I G++ +D +A+ +FR M G+ PNE TL V+ +
Sbjct: 38 LQYAQRMFDQIPQPNKFMYNSLIRGYSNSDDPIDAVLLFRRMICSGLSPNEFTLPFVLKA 97
Query: 165 SVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSW 224
WE ++HGL IKL I V + L+ +Y VC + AR LFD++ ++ +VSW
Sbjct: 98 CGCKSAYWEAVLVHGLAIKLGIGSLVFVQNALIAVYVVCGLIHCARKLFDDITDKTLVSW 157
Query: 225 NVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIA 284
N M+ G+A G +W EA ++R M G+
Sbjct: 158 NSMIGGYAHMG------------------NW-------------KEAFLLFRKMREWGME 186
Query: 285 PNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQ 344
P+ V+L+S C ++ G +H I G ++ ++ YA CG ++ A+
Sbjct: 187 PDGFTFVNLLSVCSQSRDLDLGRYVHFCIEITGVKIDIIVRNALVDMYAKCGNLHSAQAI 246
Query: 345 FELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMAL 404
F+ + ++ SW ++I+ + ++G IE ARQ+F+ M ++V SW++MIS Y + Q AL
Sbjct: 247 FDRTQEKNVVSWTSMISAYAQHGSIEVARQIFDQMPGKNVVSWNSMISCYLREGQYREAL 306
Query: 405 ELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMY 464
+LF+ M ++ V P+E T+VS+ A + G L G+ H Y+L+N L ++IDMY
Sbjct: 307 DLFNKMRNSRVVPDEATLVSILAACSQLGDLVMGKKIHNYILSNKGAYGVTLYNSLIDMY 366
Query: 465 AKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSIT 524
AKCG + TA ++F + + ++ WN II LA+HG +K++ +++ + IT
Sbjct: 367 AKCGPVVTALDIFLEMPGK--NLVSWNVIIGALALHGCGLEAIKLFEEMQADGTLPDEIT 424
Query: 525 FIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSM 584
G+LS C H+GLVD+G YF M +Y V +++HY CMVDLLGR G L +A E+I M
Sbjct: 425 LTGLLSACSHSGLVDMGLYYFDRMGVIYRVPREIEHYACMVDLLGRGGLLGEAIELIGRM 484
Query: 585 PMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAF 644
PMK DVV+WG LL A RIHGNVE+G++ K L L+P G VL+SNIY +A RWED
Sbjct: 485 PMKPDVVVWGALLGACRIHGNVEIGKQILKQLLELEPHSGGLYVLISNIYWEAQRWEDVK 544
Query: 645 SIRKEMRDCGMKRLPGFSGV 664
IRK M D G+K+ S +
Sbjct: 545 KIRKLMIDRGIKKGRAISSI 564
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 117/409 (28%), Positives = 196/409 (47%), Gaps = 43/409 (10%)
Query: 20 SDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKS 79
S E L L+ C A + +H L K G+ S F+QN+LI +Y CGLI
Sbjct: 85 SPNEFTLPFVLKACGCKSAYWEAVLVHGLAIKLGIGSLVFVQNALIAVYVVCGLI----- 139
Query: 80 MFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREA 139
+ AR++FD K VS+ SMI G+A W+EA
Sbjct: 140 --------------------------HCARKLFDDITDKTLVSWNSMIGGYAHMGNWKEA 173
Query: 140 LEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNM 199
+FR MR G+ P+ T +++S + R +H + + +I+ L++M
Sbjct: 174 FLLFRKMREWGMEPDGFTFVNLLSVCSQSRDLDLGRYVHFCIEITGVKIDIIVRNALVDM 233
Query: 200 YCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMI 259
Y C +L A+++FD +E+N+VSW M++ +A+ G +E+AR++F+++P K+VVSW +MI
Sbjct: 234 YAKCGNLHSAQAIFDRTQEKNVVSWTSMISAYAQHGSIEVARQIFDQMPGKNVVSWNSMI 293
Query: 260 DGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVK---- 315
YL+ + EAL ++ M + P++ +V +++AC + G +IH+ I+
Sbjct: 294 SCYLREGQYREALDLFNKMRNSRVVPDEATLVSILAACSQLGDLVMGKKIHNYILSNKGA 353
Query: 316 AGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQL 375
G Y+ ++I YA CG + A F ++ SWN +I +G +A +L
Sbjct: 354 YGVTLYN----SLIDMYAKCGPVVTALDIFLEMPGKNLVSWNVIIGALALHGCGLEAIKL 409
Query: 376 FNNMQK----RDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEI 420
F MQ D + + ++S + + +M L F M P EI
Sbjct: 410 FEEMQADGTLPDEITLTGLLSACSHSGLVDMGLYYFDRMGVIYRVPREI 458
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 97/405 (23%), Positives = 185/405 (45%), Gaps = 72/405 (17%)
Query: 234 AGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDL 293
AG ++ A+ +F++IP + + ++I GY + +A+ ++R M+C G++PN+ + +
Sbjct: 35 AGDLQYAQRMFDQIPQPNKFMYNSLIRGYSNSDDPIDAVLLFRRMICSGLSPNEFTLPFV 94
Query: 294 ISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHI 353
+ ACG A+ E + +H + +K G F+Q +I Y CG I+ AR F+ +
Sbjct: 95 LKACGCKSAYWEAVLVHGLAIKLGIGSLVFVQNALIAVYVVCGLIHCARKLFDDITDKTL 154
Query: 354 ASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDA 413
SWN++I G+ G ++A LF M++ W
Sbjct: 155 VSWNSMIGGYAHMGNWKEAFLLFRKMRE-----W-------------------------- 183
Query: 414 GVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTA 473
G++P+ T V++ + S L GR+ H + + ++ + A++DMYAKCG++++A
Sbjct: 184 GMEPDGFTFVNLLSVCSQSRDLDLGRYVHFCIEITGVKIDIIVRNALVDMYAKCGNLHSA 243
Query: 474 FEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRN-IKLNSI--------- 523
+F R + +V W ++I A HG + +I+ + +N + NS+
Sbjct: 244 QAIFD--RTQEKNVVSWTSMISAYAQHGSIEVARQIFDQMPGKNVVSWNSMISCYLREGQ 301
Query: 524 ---------------------TFIGVLSTCCHAGLVDLGER---YFKSMKSVYNVEPDLK 559
T + +L+ C G + +G++ Y S K Y V
Sbjct: 302 YREALDLFNKMRNSRVVPDEATLVSILAACSQLGDLVMGKKIHNYILSNKGAYGVTL--- 358
Query: 560 HYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHG 604
Y ++D+ + G + A ++ MP K ++V W ++ A +HG
Sbjct: 359 -YNSLIDMYAKCGPVVTALDIFLEMPGK-NLVSWNVIIGALALHG 401
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 102/409 (24%), Positives = 188/409 (45%), Gaps = 58/409 (14%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
V+ L CS + G+ +H I +G++ + ++N+L+++YAKCG + A+++FD
Sbjct: 190 FTFVNLLSVCSQSRDLDLGRYVHFCIEITGVKIDIIVRNALVDMYAKCGNLHSAQAIFDR 249
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
+ V+ MIS Y ++ + AR++FD+ P K VS+ SMI + + +REAL++F
Sbjct: 250 TQEKNVVSWTSMISAYAQHGSIEVARQIFDQMPGKNVVSWNSMISCYLREGQYREALDLF 309
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
MR V+P+E TL S++++ LG + + +H ++ V + +L++MY C
Sbjct: 310 NKMRNSRVVPDEATLVSILAACSQLGDLVMGKKIHNYILSNKGAYGVTLYNSLIDMYAKC 369
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYL 263
+V A +F EM +N+VSWNV++ A G
Sbjct: 370 GPVVTALDIFLEMPGKNLVSWNVIIGALALHGCG-------------------------- 403
Query: 264 QVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD- 322
EA+ ++ M DG P+++ + L+SAC HS +V G +D
Sbjct: 404 -----LEAIKLFEEMQADGTLPDEITLTGLLSACS-----------HSGLVDMGLYYFDR 447
Query: 323 -----FIQATIIHFYAACGRINLARLQFE-------LGIKDHIASWNALIAGFIRNGMIE 370
+ I H+ + L E + +K + W AL+ +G +E
Sbjct: 448 MGVIYRVPREIEHYACMVDLLGRGGLLGEAIELIGRMPMKPDVVVWGALLGACRIHGNVE 507
Query: 371 DARQLFNNMQKRDVYSWS--AMISG-YAQNEQPNMALELFHGMVDAGVK 416
+Q+ + + + +S +IS Y + ++ ++ M+D G+K
Sbjct: 508 IGKQILKQLLELEPHSGGLYVLISNIYWEAQRWEDVKKIRKLMIDRGIK 556
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 124/284 (43%), Gaps = 45/284 (15%)
Query: 9 VFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLY 68
+FN + + D E LVS L CS + G++IH+ I + + NSLI++Y
Sbjct: 308 LFNKMRNSRVVPD-EATLVSILAACSQLGDLVMGKKIHNYILSNKGAYGVTLYNSLIDMY 366
Query: 69 AKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIM 128
AKCG PV A ++F + P K VS+ +I
Sbjct: 367 AKCG----------------PVVT---------------ALDIFLEMPGKNLVSWNVIIG 395
Query: 129 GFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVH-----LGGIWECRMLHGLVIK 183
A + C EA+++F +M+ G +P+E+TL ++S+ H +G + RM +
Sbjct: 396 ALALHGCGLEAIKLFEEMQADGTLPDEITLTGLLSACSHSGLVDMGLYYFDRMGVIYRVP 455
Query: 184 LMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKER-NIVSWNVMLNGFAKAGLVELARE 242
I+ + ++++ L EA L M + ++V W +L G VE+ ++
Sbjct: 456 REIEHYAC----MVDLLGRGGLLGEAIELIGRMPMKPDVVVWGALLGACRIHGNVEIGKQ 511
Query: 243 LFERIPSKDVVSWGTMI---DGYLQVERLSEALTMYRAMLCDGI 283
+ +++ + S G + + Y + +R + + + M+ GI
Sbjct: 512 ILKQLLELEPHSGGLYVLISNIYWEAQRWEDVKKIRKLMIDRGI 555
>gi|449458783|ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 355 bits (912), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 202/635 (31%), Positives = 320/635 (50%), Gaps = 95/635 (14%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
L+ C + + +G++IH + + +N F ++N+YAKC
Sbjct: 154 LKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKC------------------ 195
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
+++DA ++FD+ P + VS+ ++I GF+QN ++ALE+ M+
Sbjct: 196 -------------RQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDE 242
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
G P+ +TL +V+ ++ +G + + +HG I+ V IST L +MY C S
Sbjct: 243 GQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGS---- 298
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLS 269
VE AR +F+ + K VVSW +M+DGY+Q
Sbjct: 299 ---------------------------VETARLIFDGMDQKTVVSWNSMMDGYVQNGEPE 331
Query: 270 EALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATII 329
+A+ ++ ML +GI P V I++ + AC G +H + + + ++I
Sbjct: 332 KAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLI 391
Query: 330 HFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSA 389
Y+ C R+++A +FNN+ R SW+A
Sbjct: 392 SMYSKCKRVDIAS-------------------------------DIFNNLNGRTHVSWNA 420
Query: 390 MISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNS 449
MI GYAQN + + AL F M G+KP+ TMVSV A+A + +W H ++ +
Sbjct: 421 MILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSC 480
Query: 450 ITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKI 509
+ N ++ A++DMY+KCG+I+ A ++F I DR V WNA+I G HG L +
Sbjct: 481 LDKNIFVTTALVDMYSKCGAIHMARKLFDMISDR--HVITWNAMIDGYGTHGLGRAALDL 538
Query: 510 YSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLG 569
+ ++K ++ N IT++ V+S C H+GLVD G R+FKSMK Y +EP + HYG MVDLLG
Sbjct: 539 FDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLG 598
Query: 570 RAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVL 629
RAG++++A + I +MP+ + ++G A +IH N+EVGE+AAK L L P G VL
Sbjct: 599 RAGRIKEAWDFIENMPISPGITVYGAXXGACKIHKNIEVGEKAAKKLFELNPDEGGYHVL 658
Query: 630 LSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
L+NIYA +W +RK M G+K+ PG S V
Sbjct: 659 LANIYASTSKWSKVAEVRKTMEKKGLKKTPGCSVV 693
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 133/285 (46%), Gaps = 62/285 (21%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+ ++ AL C+ + +G+ +H + + L S+ + NSLI++Y+KC + A +F++
Sbjct: 350 VTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNN 409
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
+ V+ N MI GY +N R++ EAL F
Sbjct: 410 LNGRTHVSWNAMILGYAQNGRVS-------------------------------EALNCF 438
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
+M+ LG+ P+ T+ SVI + L + +HGL+I+ +D + ++T L++MY C
Sbjct: 439 SEMKSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKC 498
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYL 263
++ AR LFD + +R++++WN M++G+ GL A +LF++
Sbjct: 499 GAIHMARKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDK----------------- 541
Query: 264 QVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQ 308
M + PND+ + +ISAC + EGL+
Sbjct: 542 --------------MKKGAVEPNDITYLSVISACSHSGLVDEGLR 572
Score = 38.9 bits (89), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 36/193 (18%), Positives = 81/193 (41%), Gaps = 4/193 (2%)
Query: 407 FHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAK 466
FH + + P+ + + ++KE V+ N + ++ +++K
Sbjct: 34 FHTLSERAHIPSHVYKHPAAVLLELCTSMKELHQIIPLVIKNGLYNEHLFQTKLVSLFSK 93
Query: 467 CGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFI 526
GSIN A VF I D+ ++ ++ ++ G A + L + ++K F
Sbjct: 94 YGSINEAARVFEPIDDKLDAL--YHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFT 151
Query: 527 GVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPM 586
+L C + G+ + + + ++ +V++ + Q++DA ++ MP
Sbjct: 152 YLLKVCGDNADLKRGKEIHGQLIT-NSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPE 210
Query: 587 KADVVIWGTLLAA 599
+ D+V W T++A
Sbjct: 211 R-DLVSWNTIIAG 222
>gi|15225445|ref|NP_178983.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206168|sp|Q9SIT7.1|PP151_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g13600
gi|4558664|gb|AAD22682.1| hypothetical protein [Arabidopsis thaliana]
gi|330251150|gb|AEC06244.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 697
Score = 355 bits (912), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 213/626 (34%), Positives = 329/626 (52%), Gaps = 42/626 (6%)
Query: 45 IHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDR 104
+H+ + KSG + FIQN LI+ Y+KCG + + +FD + N +++G +
Sbjct: 42 VHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGF 101
Query: 105 LNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISS 164
L++A +F P + ++ SM+ GFAQ+D EAL F M G + NE + ASV+S+
Sbjct: 102 LDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSA 161
Query: 165 SVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSW 224
L + + +H L+ K V I + L++MY C
Sbjct: 162 CSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKC--------------------- 200
Query: 225 NVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIA 284
G V A+ +F+ + ++VVSW ++I + Q EAL +++ ML +
Sbjct: 201 ----------GNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVE 250
Query: 285 PNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQAT-IIHFYAACGRINLARL 343
P++V + +ISAC A G ++H +VK D I + + YA C RI AR
Sbjct: 251 PDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARF 310
Query: 344 QFE-LGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNM 402
F+ + I++ IA ++I+G+ + AR +F M +R+V SW+A+I+GY QN +
Sbjct: 311 IFDSMPIRNVIAE-TSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEE 369
Query: 403 ALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDN------L 456
AL LF + V P + ++ A A L G AH +VL + +
Sbjct: 370 ALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFV 429
Query: 457 SAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKR 516
++IDMY KCG + + VF + +R WNA+I G A +G N L+++ ++ +
Sbjct: 430 GNSLIDMYVKCGCVEEGYLVFRKMMER--DCVSWNAMIIGFAQNGYGNEALELFREMLES 487
Query: 517 NIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLED 576
K + IT IGVLS C HAG V+ G YF SM + V P HY CMVDLLGRAG LE+
Sbjct: 488 GEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEE 547
Query: 577 AEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYAD 636
A+ +I MPM+ D VIWG+LLAA ++H N+ +G+ A+ L ++PS+ VLLSN+YA+
Sbjct: 548 AKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAE 607
Query: 637 AGRWEDAFSIRKEMRDCGMKRLPGFS 662
G+WED ++RK MR G+ + PG S
Sbjct: 608 LGKWEDVMNVRKSMRKEGVTKQPGCS 633
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 150/491 (30%), Positives = 248/491 (50%), Gaps = 63/491 (12%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E + S L CS +++G Q+HSLI KS S+ +I ++L+++Y+KCG ++ A+ +FD
Sbjct: 152 EYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFD 211
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
E+ D+ VS+ S+I F QN EAL+V
Sbjct: 212 ---------------------------EMGDRN----VVSWNSLITCFEQNGPAVEALDV 240
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIK-LMIDGFVIISTNLLNMYC 201
F+ M V P+EVTLASVIS+ L I + +HG V+K + +I+S ++MY
Sbjct: 241 FQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYA 300
Query: 202 VCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDG 261
CS + EAR +FD M RN+++ M++G+A A + AR +F ++ ++VVSW +I G
Sbjct: 301 KCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAG 360
Query: 262 YLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCY 321
Y Q EAL+++ + + + P +++ AC G+Q H ++K GF
Sbjct: 361 YTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGF--- 417
Query: 322 DFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQK 381
+F+ G +D I N+LI +++ G +E+ +F M +
Sbjct: 418 ----------------------KFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMME 455
Query: 382 RDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWA 441
RD SW+AMI G+AQN N ALELF M+++G KP+ ITM+ V A +G ++EGR
Sbjct: 456 RDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHY 515
Query: 442 HEYVLNN--SITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAM 499
+ + L D+ + ++D+ + G + A + + + SV W +++ +
Sbjct: 516 FSSMTRDFGVAPLRDHYT-CMVDLLGRAGFLEEAKSMIEEMPMQPDSV-IWGSLLAACKV 573
Query: 500 HGDANLTLKIY 510
H N+TL Y
Sbjct: 574 H--RNITLGKY 582
>gi|328774753|gb|AEB39776.1| pentatricopeptide repeat protein 78 [Funaria hygrometrica]
Length = 1020
Score = 355 bits (911), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 206/639 (32%), Positives = 333/639 (52%), Gaps = 95/639 (14%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+ ++ L S A+ G+ +HS I +G ES+ + +L+ +YAKCG
Sbjct: 346 ITYINVLNAFSGPAALKWGKTVHSHILNAGHESDLAVGTALVKMYAKCG----------- 394
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
D R+VF+K + +++ +MI G A+ W EA E++
Sbjct: 395 --------------------SYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGNWEEASEIY 434
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
M+ G++PN++T ++++ V+ + R +H V+K DGF
Sbjct: 435 HQMQREGMMPNKITYVILLNACVNPTALHWGREIHSRVVK---DGF-------------- 477
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYL 263
+FD I N +++ +A+ G ++ AR LF ++ KD++SW MI G
Sbjct: 478 --------MFD------ISVQNALISMYARCGSIKDARLLFNKMVRKDIISWTAMIGGLA 523
Query: 264 QVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDF 323
+ +EAL +++ M G+ PN V +++AC A G +IH +++AG
Sbjct: 524 KSGLGAEALAVFQDMQQAGLKPNRVTYTSILNACSSPAALDWGRRIHQQVIEAGLATDAH 583
Query: 324 IQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRD 383
+ T+++ Y+ CG + +DARQ+F+ M +RD
Sbjct: 584 VANTLVNMYSMCGSV-------------------------------KDARQVFDRMTQRD 612
Query: 384 VYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHE 443
+ +++AMI GYA + AL+LF + + G+KP+++T +++ A A+SG+L+ + H
Sbjct: 613 IVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAKEIHS 672
Query: 444 YVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDA 503
VL + + +L A++ YAKCGS + A VF + R +V WNAII G A HG
Sbjct: 673 LVLKDGYLSDTSLGNALVSTYAKCGSFSDALLVFDKMMKR--NVISWNAIIGGCAQHGRG 730
Query: 504 NLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGC 563
L+++ ++ IK + +TF+ +LS C HAGL++ G RYF SM + + P ++HYGC
Sbjct: 731 QDVLQLFERMKMEGIKPDIVTFVSLLSACSHAGLLEEGRRYFCSMSRDFGITPTIEHYGC 790
Query: 564 MVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSH 623
MVDLLGRAGQL++ E +I++MP +A+ IWG LL A RIHGNV V ERAA+S L P +
Sbjct: 791 MVDLLGRAGQLDEVEALIKTMPFQANTRIWGALLGACRIHGNVPVAERAAESSLKLDPDN 850
Query: 624 GPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
V LS++YA AG W+ A +RK M G+ + PG S
Sbjct: 851 AAVYVALSHMYAAAGMWDSAAKLRKLMEQRGVTKEPGRS 889
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 147/626 (23%), Positives = 270/626 (43%), Gaps = 105/626 (16%)
Query: 10 FNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYA 69
Q A + + DY + L+ C + G+++H I + + + N+LIN+Y
Sbjct: 132 LQQQGARVNSCDY----MKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNALINMYI 187
Query: 70 KCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMG 129
+CG I +A+ ++ ++LN S+ +M++G
Sbjct: 188 QCGSIEEARQVW---------------------NKLNHTERTVH--------SWNAMVVG 218
Query: 130 FAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWEC-RMLHGLVIKLMIDG 188
+ Q EAL++ R+M+ G+ T ++SS + EC R +H +K +
Sbjct: 219 YVQYGYIEEALKLLREMQQHGLALGRATTMRLLSSCKSPSAL-ECGREIHVEAMKARLLF 277
Query: 189 FVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIP 248
V ++ +LNMY C S+ EAR +FD+M+ +++VSW +++ G+A G E+A E+F++
Sbjct: 278 DVNVANCILNMYAKCGSIHEAREVFDKMETKSVVSWTIIIGGYADCGHSEIAFEIFQK-- 335
Query: 249 SKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQ 308
M +G+ PN + +++++A A G
Sbjct: 336 -----------------------------MQQEGVVPNRITYINVLNAFSGPAALKWGKT 366
Query: 309 IHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGM 368
+HS I+ AG + + ++ YA CG R FE + + +WN +I G G
Sbjct: 367 VHSHILNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGN 426
Query: 369 IEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCA 428
E+A ++++ MQ+ G+ PN+IT V + A
Sbjct: 427 WEEASEIYHQMQRE-------------------------------GMMPNKITYVILLNA 455
Query: 429 IASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVS 488
+ L GR H V+ + + ++ A+I MYA+CGSI A +F + + +
Sbjct: 456 CVNPTALHWGREIHSRVVKDGFMFDISVQNALISMYARCGSIKDARLLFNKMVRK--DII 513
Query: 489 PWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSM 548
W A+I GLA G L ++ D+++ +K N +T+ +L+ C +D G R + +
Sbjct: 514 SWTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTSILNACSSPAALDWGRRIHQQV 573
Query: 549 KSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEV 608
+ D +V++ G ++DA +V M + D+V + ++ H +
Sbjct: 574 IEA-GLATDAHVANTLVNMYSMCGSVKDARQVFDRMTQR-DIVAYNAMIGGYAAHN---L 628
Query: 609 GERAAKSLAGLQPSH-GPSRVLLSNI 633
G+ A K LQ P +V N+
Sbjct: 629 GKEALKLFDRLQEEGLKPDKVTYINM 654
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 133/538 (24%), Positives = 236/538 (43%), Gaps = 116/538 (21%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
++ V L C A+ G++IHS + K G + +QN+LI++YA+CG I A
Sbjct: 446 KITYVILLNACVNPTALHWGREIHSRVVKDGFMFDISVQNALISMYARCGSIKDA----- 500
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
R +F+K K +S+T+MI G A++ EAL V
Sbjct: 501 --------------------------RLLFNKMVRKDIISWTAMIGGLAKSGLGAEALAV 534
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
F+DM+ G+ PN VT S++++ + R +H VI+ + ++ L+NMY +
Sbjct: 535 FQDMQQAGLKPNRVTYTSILNACSSPAALDWGRRIHQQVIEAGLATDAHVANTLVNMYSM 594
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
C S+ +AR +FD M +R+IV++N M+ G+A L + A +LF+R+
Sbjct: 595 CGSVKDARQVFDRMTQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQE------------- 641
Query: 263 LQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD 322
+G+ P+ V +++++AC + + +IHS+++K G+
Sbjct: 642 ------------------EGLKPDKVTYINMLNACANSGSLEWAKEIHSLVLKDGYLSDT 683
Query: 323 FIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKR 382
+ ++ YA CG + A L F+ +K ++ SWNA+I G ++G +D QLF M+
Sbjct: 684 SLGNALVSTYAKCGSFSDALLVFDKMMKRNVISWNAIIGGCAQHGRGQDVLQLFERMKME 743
Query: 383 DVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAH 442
G+KP+ +T VS+ A + +G L+EGR
Sbjct: 744 -------------------------------GIKPDIVTFVSLLSACSHAGLLEEGR--- 769
Query: 443 EYVLNNS----ITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLA 498
Y + S IT ++D+ + G ++ E + W A++
Sbjct: 770 RYFCSMSRDFGITPTIEHYGCMVDLLGRAGQLDE-VEALIKTMPFQANTRIWGALLGACR 828
Query: 499 MHGD-------ANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMK 549
+HG+ A +LK+ D N+ ++ + AG+ D + K M+
Sbjct: 829 IHGNVPVAERAAESSLKLDPD--------NAAVYVALSHMYAAAGMWDSAAKLRKLME 878
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 116/465 (24%), Positives = 206/465 (44%), Gaps = 50/465 (10%)
Query: 180 LVIKLMIDGFVIISTNLLNMYCVC---SSLVEARSLFDEMKERNIV----SWNVMLNGFA 232
+V L G + S + + M C LV R + + + + V + N ++N +
Sbjct: 128 VVQYLQQQGARVNSCDYMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNALINMYI 187
Query: 233 KAGLVELARELFERI--PSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMI 290
+ G +E AR+++ ++ + V SW M+ GY+Q + EAL + R M G+A
Sbjct: 188 QCGSIEEARQVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLALGRATT 247
Query: 291 VDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIK 350
+ L+S+C A G +IH +KA + I++ YA CG I+ AR F+
Sbjct: 248 MRLLSSCKSPSALECGREIHVEAMKARLLFDVNVANCILNMYAKCGSIHEAREVFDKMET 307
Query: 351 DHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGM 410
+ SW +I G+ G E +A E+F M
Sbjct: 308 KSVVSWTIIIGGYADCGHSE-------------------------------IAFEIFQKM 336
Query: 411 VDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSI 470
GV PN IT ++V A + LK G+ H ++LN + + A++ MYAKCGS
Sbjct: 337 QQEGVVPNRITYINVLNAFSGPAALKWGKTVHSHILNAGHESDLAVGTALVKMYAKCGSY 396
Query: 471 NTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLS 530
+VF + +R + WN +I GLA G+ +IY +++ + N IT++ +L+
Sbjct: 397 KDCRQVFEKLVNR--DLIAWNTMIGGLAEGGNWEEASEIYHQMQREGMMPNKITYVILLN 454
Query: 531 TCCHAGLVDLG-ERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKAD 589
C + + G E + + +K + D+ ++ + R G ++DA + M ++ D
Sbjct: 455 ACVNPTALHWGREIHSRVVKDGFMF--DISVQNALISMYARCGSIKDARLLFNKM-VRKD 511
Query: 590 VVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSH-GPSRVLLSNI 633
++ W ++ G +G A +Q + P+RV ++I
Sbjct: 512 IISWTAMIGGLAKSG---LGAEALAVFQDMQQAGLKPNRVTYTSI 553
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 97/383 (25%), Positives = 183/383 (47%), Gaps = 50/383 (13%)
Query: 13 QKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCG 72
Q+A L+ + + S L CS+ A+ G++IH + ++GL ++ + N+L+N+Y+ CG
Sbjct: 539 QQAGLKPN--RVTYTSILNACSSPAALDWGRRIHQQVIEAGLATDAHVANTLVNMYSMCG 596
Query: 73 LISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQ 132
+ A+ +FD + D VA N MI GY A
Sbjct: 597 SVKDARQVFDRMTQRDIVAYNAMIGGY-------------------------------AA 625
Query: 133 NDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFV-- 190
++ +EAL++F ++ G+ P++VT +++++ + G + + +H LV+K DG++
Sbjct: 626 HNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAKEIHSLVLK---DGYLSD 682
Query: 191 -IISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIP- 248
+ L++ Y C S +A +FD+M +RN++SWN ++ G A+ G + +LFER+
Sbjct: 683 TSLGNALVSTYAKCGSFSDALLVFDKMMKRNVISWNAIIGGCAQHGRGQDVLQLFERMKM 742
Query: 249 ---SKDVVSWGTMIDGYLQVERLSEALTMYRAMLCD-GIAPNDVMIVDLISACGRAMAFG 304
D+V++ +++ L E + +M D GI P ++ GRA G
Sbjct: 743 EGIKPDIVTFVSLLSACSHAGLLEEGRRYFCSMSRDFGITPTIEHYGCMVDLLGRA---G 799
Query: 305 EGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIK---DHIASWNALIA 361
+ ++ ++I F I ++ G + +A E +K D+ A + AL
Sbjct: 800 QLDEVEALIKTMPFQANTRIWGALLGACRIHGNVPVAERAAESSLKLDPDNAAVYVALSH 859
Query: 362 GFIRNGMIEDARQLFNNMQKRDV 384
+ GM + A +L M++R V
Sbjct: 860 MYAAAGMWDSAAKLRKLMEQRGV 882
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 110/234 (47%), Gaps = 6/234 (2%)
Query: 401 NMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAI 460
+ A+++ + G + N + + L GR HE+++ + L+ A+
Sbjct: 123 DRAMDVVQYLQQQGARVNSCDYMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNAL 182
Query: 461 IDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKL 520
I+MY +CGSI A +V+ + +V WNA++ G +G LK+ ++++ + L
Sbjct: 183 INMYIQCGSIEEARQVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLAL 242
Query: 521 NSITFIGVLSTCCHAGLVDLG-ERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEE 579
T + +LS+C ++ G E + ++MK+ + D+ C++++ + G + +A E
Sbjct: 243 GRATTMRLLSSCKSPSALECGREIHVEAMKA--RLLFDVNVANCILNMYAKCGSIHEARE 300
Query: 580 VIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNI 633
V M K+ VV W ++ G+ E+ + + Q P+R+ N+
Sbjct: 301 VFDKMETKS-VVSWTIIIGGYADCGHSEIAFEIFQKMQ--QEGVVPNRITYINV 351
>gi|356495448|ref|XP_003516589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Glycine max]
Length = 667
Score = 355 bits (910), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 187/568 (32%), Positives = 311/568 (54%), Gaps = 33/568 (5%)
Query: 95 MISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPN 154
++S ++ L A +FD+ P Y +I G++ ++ ++L +FR M G +PN
Sbjct: 77 LLSLCVQEGDLRYAHLLFDQIPQPNKFMYNHLIRGYSNSNDPMKSLLLFRQMVSAGPMPN 136
Query: 155 EVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFD 214
+ T V+ + WE ++H IKL + + +L Y C ++ AR +FD
Sbjct: 137 QFTFPFVLKACAAKPFYWEAVIVHAQAIKLGMGPHACVQNAILTAYVACRLILSARQVFD 196
Query: 215 EMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTM 274
++ +R IVSWN M+ G++K G + EA+ +
Sbjct: 197 DISDRTIVSWNSMIAGYSKMGFCD-------------------------------EAILL 225
Query: 275 YRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAA 334
++ ML G+ + +V L+SA + G +H IV G + + +I YA
Sbjct: 226 FQEMLQLGVEADVFTLVSLLSASSKHCNLDLGRFVHLYIVITGVEIDSIVTNALIDMYAK 285
Query: 335 CGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGY 394
CG + A+ F+ + + SW +++ + G++E+A Q+FN+M ++V SW+++I
Sbjct: 286 CGHLQFAKHVFDQMLDKDVVSWTSMVNAYANQGLVENAVQIFNHMPVKNVVSWNSIICCL 345
Query: 395 AQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLND 454
Q Q A+ELFH M +GV P++ T+VS+ +++G L G+ AH Y+ +N IT++
Sbjct: 346 VQEGQYTEAVELFHRMCISGVMPDDATLVSILSCCSNTGDLALGKQAHCYICDNIITVSV 405
Query: 455 NLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLE 514
L ++IDMYAKCG++ TA ++F+ + ++ +V WN II LA+HG ++++ ++
Sbjct: 406 TLCNSLIDMYAKCGALQTAIDIFFGMPEK--NVVSWNVIIGALALHGFGEEAIEMFKSMQ 463
Query: 515 KRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQL 574
+ + ITF G+LS C H+GLVD+G YF M S + + P ++HY CMVDLLGR G L
Sbjct: 464 ASGLYPDEITFTGLLSACSHSGLVDMGRYYFDIMISTFRISPGVEHYACMVDLLGRGGFL 523
Query: 575 EDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIY 634
+A +I+ MP+K DVV+WG LL A RI+GN+E+ ++ K L L + VLLSN+Y
Sbjct: 524 GEAMTLIQKMPVKPDVVVWGALLGACRIYGNLEIAKQIMKQLLELGRFNSGLYVLLSNMY 583
Query: 635 ADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
+++ RW+D IRK M D G+K+ S
Sbjct: 584 SESQRWDDMKKIRKIMDDSGIKKCRAIS 611
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 111/430 (25%), Positives = 207/430 (48%), Gaps = 35/430 (8%)
Query: 87 LDPVAC--NIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFR 144
+ P AC N +++ Y+ + AR+VFD + VS+ SMI G+++ EA+ +F+
Sbjct: 168 MGPHACVQNAILTAYVACRLILSARQVFDDISDRTIVSWNSMIAGYSKMGFCDEAILLFQ 227
Query: 145 DMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCS 204
+M LGV + TL S++S+S + R +H ++ ++ I++ L++MY C
Sbjct: 228 EMLQLGVEADVFTLVSLLSASSKHCNLDLGRFVHLYIVITGVEIDSIVTNALIDMYAKCG 287
Query: 205 SLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQ 264
L A+ +FD+M ++++VSW M+N +A GLVE A ++F +P K+VVSW ++I +Q
Sbjct: 288 HLQFAKHVFDQMLDKDVVSWTSMVNAYANQGLVENAVQIFNHMPVKNVVSWNSIICCLVQ 347
Query: 265 VERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFI 324
+ +EA+ ++ M G+ P+D +V ++S C G Q H I +
Sbjct: 348 EGQYTEAVELFHRMCISGVMPDDATLVSILSCCSNTGDLALGKQAHCYICDNIITVSVTL 407
Query: 325 QATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDV 384
++I YA CG + A F + ++ SWN +I +G E+A ++F +MQ
Sbjct: 408 CNSLIDMYAKCGALQTAIDIFFGMPEKNVVSWNVIIGALALHGFGEEAIEMFKSMQA--- 464
Query: 385 YSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEY 444
+G+ P+EIT + A + SG + GR+ +
Sbjct: 465 ----------------------------SGLYPDEITFTGLLSACSHSGLVDMGRYYFDI 496
Query: 445 VLNN-SITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDA 503
+++ I+ A ++D+ + G + A + + + V W A++ ++G+
Sbjct: 497 MISTFRISPGVEHYACMVDLLGRGGFLGEAMTLIQKMPVK-PDVVVWGALLGACRIYGNL 555
Query: 504 NLTLKIYSDL 513
+ +I L
Sbjct: 556 EIAKQIMKQL 565
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 106/451 (23%), Positives = 197/451 (43%), Gaps = 81/451 (17%)
Query: 216 MKERNIVSWNVMLNGFA--------------KAGLVELARELFERIPSKDVVSWGTMIDG 261
MK +V ++L+G A + G + A LF++IP + + +I G
Sbjct: 52 MKRLKLVHAQIILHGLAAQVVTLGKLLSLCVQEGDLRYAHLLFDQIPQPNKFMYNHLIRG 111
Query: 262 YLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCY 321
Y ++L ++R M+ G PN ++ AC + E + +H+ +K
Sbjct: 112 YSNSNDPMKSLLLFRQMVSAGPMPNQFTFPFVLKACAAKPFYWEAVIVHAQAIK------ 165
Query: 322 DFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQK 381
LG+ H NA++ ++ +I ARQ+F+++
Sbjct: 166 -------------------------LGMGPHACVQNAILTAYVACRLILSARQVFDDISD 200
Query: 382 RDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWA 441
R + SW++MI+GY++ + A+ LF M+ GV+ + T+VS+ A + L GR+
Sbjct: 201 RTIVSWNSMIAGYSKMGFCDEAILLFQEMLQLGVEADVFTLVSLLSASSKHCNLDLGRFV 260
Query: 442 HEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDR------------------ 483
H Y++ + ++ ++ A+IDMYAKCG + A VF + D+
Sbjct: 261 HLYIVITGVEIDSIVTNALIDMYAKCGHLQFAKHVFDQMLDKDVVSWTSMVNAYANQGLV 320
Query: 484 -----------TTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTC 532
+V WN+IIC L G ++++ + + + T + +LS C
Sbjct: 321 ENAVQIFNHMPVKNVVSWNSIICCLVQEGQYTEAVELFHRMCISGVMPDDATLVSILSCC 380
Query: 533 CHAGLVDLGER-YFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVV 591
+ G + LG++ + ++ V L + ++D+ + G L+ A ++ MP K +VV
Sbjct: 381 SNTGDLALGKQAHCYICDNIITVSVTLCN--SLIDMYAKCGALQTAIDIFFGMPEK-NVV 437
Query: 592 IWGTLLAASRIHGNVEVGERAAKSLAGLQPS 622
W ++ A +HG GE A + +Q S
Sbjct: 438 SWNVIIGALALHG---FGEEAIEMFKSMQAS 465
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 102/402 (25%), Positives = 191/402 (47%), Gaps = 44/402 (10%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
LVS L S H + G+ +H I +G+E ++ + N+LI++YAKCG + AK +FD
Sbjct: 239 FTLVSLLSASSKHCNLDLGRFVHLYIVITGVEIDSIVTNALIDMYAKCGHLQFAKHVFDQ 298
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
D V+ M++ Y + +A ++F+ P+K VS+ S+I Q + EA+E+F
Sbjct: 299 MLDKDVVSWTSMVNAYANQGLVENAVQIFNHMPVKNVVSWNSIICCLVQEGQYTEAVELF 358
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
M I GV+P++ TL S++S + G + + H + +I V + +L++MY C
Sbjct: 359 HRMCISGVMPDDATLVSILSCCSNTGDLALGKQAHCYICDNIITVSVTLCNSLIDMYAKC 418
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYL 263
+L A +F M E+N+VSWNV++ A G E
Sbjct: 419 GALQTAIDIFFGMPEKNVVSWNVIIGALALHGFGE------------------------- 453
Query: 264 QVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEG-----LQIHSIIVKAGF 318
EA+ M+++M G+ P+++ L+SAC + G + I + + G
Sbjct: 454 ------EAIEMFKSMQASGLYPDEITFTGLLSACSHSGLVDMGRYYFDIMISTFRISPGV 507
Query: 319 DCYDFIQATIIHFYAACGRINLA-RLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFN 377
+ Y A ++ G + A L ++ +K + W AL+ G +E A+Q+
Sbjct: 508 EHY----ACMVDLLGRGGFLGEAMTLIQKMPVKPDVVVWGALLGACRIYGNLEIAKQIMK 563
Query: 378 NMQKRDVYS---WSAMISGYAQNEQPNMALELFHGMVDAGVK 416
+ + ++ + + + Y+++++ + ++ M D+G+K
Sbjct: 564 QLLELGRFNSGLYVLLSNMYSESQRWDDMKKIRKIMDDSGIK 605
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 132/285 (46%), Gaps = 8/285 (2%)
Query: 327 TIIHFYAACG---RINLARLQFEL-GIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKR 382
T+ H C R+ L Q L G+ + + L++ ++ G + A LF+ + +
Sbjct: 41 TLHHLLDQCSSMKRLKLVHAQIILHGLAAQVVTLGKLLSLCVQEGDLRYAHLLFDQIPQP 100
Query: 383 DVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAH 442
+ + ++ +I GY+ + P +L LF MV AG PN+ T V A A+ E H
Sbjct: 101 NKFMYNHLIRGYSNSNDPMKSLLLFRQMVSAGPMPNQFTFPFVLKACAAKPFYWEAVIVH 160
Query: 443 EYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGD 502
+ + + + AI+ Y C I +A +VF I DRT + WN++I G + G
Sbjct: 161 AQAIKLGMGPHACVQNAILTAYVACRLILSARQVFDDISDRT--IVSWNSMIAGYSKMGF 218
Query: 503 ANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYG 562
+ + ++ ++ + ++ + T + +LS +DLG R+ + VE D
Sbjct: 219 CDEAILLFQEMLQLGVEADVFTLVSLLSASSKHCNLDLG-RFVHLYIVITGVEIDSIVTN 277
Query: 563 CMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVE 607
++D+ + G L+ A+ V M + DVV W +++ A G VE
Sbjct: 278 ALIDMYAKCGHLQFAKHVFDQM-LDKDVVSWTSMVNAYANQGLVE 321
>gi|224140549|ref|XP_002323645.1| predicted protein [Populus trichocarpa]
gi|222868275|gb|EEF05406.1| predicted protein [Populus trichocarpa]
Length = 682
Score = 354 bits (908), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 202/620 (32%), Positives = 316/620 (50%), Gaps = 95/620 (15%)
Query: 43 QQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRN 102
+ IH+ + + GL+ +T++ N ++ G + + + D T +P NI +
Sbjct: 27 KHIHAALLRLGLDEDTYLLNKVLRFSFNFGNTNYSFRILDQ--TKEP---NIFL------ 75
Query: 103 DRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVI 162
+ +MI G NDC++E++E++ MR G+ P+ T V+
Sbjct: 76 --------------------FNTMIRGLVLNDCFQESIEIYHSMRKEGLSPDSFTFPFVL 115
Query: 163 SSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIV 222
+ + +H LV+K + + +L+N+Y C
Sbjct: 116 KACARVLDSELGVKMHSLVVKAGCEADAFVKISLINLYTKC------------------- 156
Query: 223 SWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDG 282
G ++ A ++F+ IP K+ SW I GY+ V + EA+ M+R +L G
Sbjct: 157 ------------GFIDNAFKVFDDIPDKNFASWTATISGYVGVGKCREAIDMFRRLLEMG 204
Query: 283 IAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLAR 342
+ P+ +V+++SAC R G I I + G F+ ++ FY CG +
Sbjct: 205 LRPDSFSLVEVLSACKRTGDLRSGEWIDEYITENGMVRNVFVATALVDFYGKCGNM---- 260
Query: 343 LQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNM 402
E AR +F+ M ++++ SWS+MI GYA N P
Sbjct: 261 ---------------------------ERARSVFDGMLEKNIVSWSSMIQGYASNGLPKE 293
Query: 403 ALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIID 462
AL+LF M++ G+KP+ MV V C+ A G L+ G WA + N N L A+ID
Sbjct: 294 ALDLFFKMLNEGLKPDCYAMVGVLCSCARLGALELGDWASNLINGNEFLDNSVLGTALID 353
Query: 463 MYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNS 522
MYAKCG ++ A+EVF +R + V WNA I GLAM G L ++ +EK IK +
Sbjct: 354 MYAKCGRMDRAWEVFRGMRKKDRVV--WNAAISGLAMSGHVKDALGLFGQMEKSGIKPDR 411
Query: 523 ITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIR 582
TF+G+L C HAGLV+ G RYF SM+ V+ + P+++HYGCMVDLLGRAG L++A ++I+
Sbjct: 412 NTFVGLLCACTHAGLVEEGRRYFNSMECVFTLTPEIEHYGCMVDLLGRAGCLDEAHQLIK 471
Query: 583 SMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWED 642
SMPM+A+ ++WG LL R+H + ++ E K L L+P H + VLLSNIYA + +WE+
Sbjct: 472 SMPMEANAIVWGALLGGCRLHRDTQLVEVVLKKLIALEPWHSGNYVLLSNIYAASHKWEE 531
Query: 643 AFSIRKEMRDCGMKRLPGFS 662
A IR M + G+K++PG+S
Sbjct: 532 AAKIRSIMSERGVKKIPGYS 551
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 124/502 (24%), Positives = 217/502 (43%), Gaps = 100/502 (19%)
Query: 6 FHSVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLI 65
+HS+ +K L + V L+ C+ + G ++HSL+ K+G E++ F++ SLI
Sbjct: 96 YHSM---RKEGLSPDSFTFPFV--LKACARVLDSELGVKMHSLVVKAGCEADAFVKISLI 150
Query: 66 NLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTS 125
NLY KCG I ++A +VFD P K S+T+
Sbjct: 151 NLYTKCGFI-------------------------------DNAFKVFDDIPDKNFASWTA 179
Query: 126 MIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLM 185
I G+ REA+++FR + +G+ P+ +L V+S+ G + + + +
Sbjct: 180 TISGYVGVGKCREAIDMFRRLLEMGLRPDSFSLVEVLSACKRTGDLRSGEWIDEYITENG 239
Query: 186 IDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFE 245
+ V ++T L++ Y C ++ ARS+FD M E+NIVSW+ M+ G+A GL +
Sbjct: 240 MVRNVFVATALVDFYGKCGNMERARSVFDGMLEKNIVSWSSMIQGYASNGLPK------- 292
Query: 246 RIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGE 305
EAL ++ ML +G+ P+ +V ++ +C R A
Sbjct: 293 ------------------------EALDLFFKMLNEGLKPDCYAMVGVLCSCARLGALEL 328
Query: 306 GLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIR 365
G ++I F + +I YA CGR++ A F K WNA I+G
Sbjct: 329 GDWASNLINGNEFLDNSVLGTALIDMYAKCGRMDRAWEVFRGMRKKDRVVWNAAISGLAM 388
Query: 366 NGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSV 425
+G ++DA LF M+K +G+KP+ T V +
Sbjct: 389 SGHVKDALGLFGQMEK-------------------------------SGIKPDRNTFVGL 417
Query: 426 FCAIASSGTLKEG-RWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRT 484
CA +G ++EG R+ + ++T ++D+ + G ++ A ++ +
Sbjct: 418 LCACTHAGLVEEGRRYFNSMECVFTLTPEIEHYGCMVDLLGRAGCLDEAHQLIKSMPMEA 477
Query: 485 TSVSPWNAIICGLAMHGDANLT 506
++ W A++ G +H D L
Sbjct: 478 NAIV-WGALLGGCRLHRDTQLV 498
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 127/291 (43%), Gaps = 23/291 (7%)
Query: 317 GFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLF 376
GF C ++ H +AA R LG+ + N ++ G + ++
Sbjct: 19 GFSCLKHLK----HIHAALLR---------LGLDEDTYLLNKVLRFSFNFGNTNYSFRIL 65
Query: 377 NNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLK 436
+ ++ +++ ++ MI G N+ ++E++H M G+ P+ T V A A +
Sbjct: 66 DQTKEPNIFLFNTMIRGLVLNDCFQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSE 125
Query: 437 EGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICG 496
G H V+ + + ++I++Y KCG I+ AF+VF I D+ + + W A I G
Sbjct: 126 LGVKMHSLVVKAGCEADAFVKISLINLYTKCGFIDNAFKVFDDIPDK--NFASWTATISG 183
Query: 497 LAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGE---RYFKSMKSVYN 553
G + ++ L + ++ +S + + VLS C G + GE Y V N
Sbjct: 184 YVGVGKCREAIDMFRRLLEMGLRPDSFSLVEVLSACKRTGDLRSGEWIDEYITENGMVRN 243
Query: 554 VEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHG 604
V +VD G+ G +E A V M ++ ++V W +++ +G
Sbjct: 244 VFVAT----ALVDFYGKCGNMERARSVFDGM-LEKNIVSWSSMIQGYASNG 289
>gi|297734304|emb|CBI15551.3| unnamed protein product [Vitis vinifera]
Length = 685
Score = 354 bits (908), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 204/569 (35%), Positives = 306/569 (53%), Gaps = 49/569 (8%)
Query: 96 ISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNE 155
+ G +R L AR +FD+ P + VS+ +M+ G+AQN +EA E+F +M N
Sbjct: 37 LRGCVRYRNLRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEM----PCKNS 92
Query: 156 VTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDE 215
++ ++++ V G I + R L + D +I ++ Y + LV+AR +FD
Sbjct: 93 ISWNGMLAAYVQNGRIEDARRL----FESKADWELISWNCMMGGYVKRNRLVDARGIFDR 148
Query: 216 MKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMY 275
M ER+ VSWN M++G+A+ G + A+ LFE P +DV +W M+ GY+Q L EA ++
Sbjct: 149 MPERDEVSWNTMISGYAQNGELLEAQRLFEESPVRDVFTWTAMVSGYVQNGMLDEARRVF 208
Query: 276 RAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAAC 335
DG+ + + + II Y C
Sbjct: 209 -----DGMPEKNSVSWN----------------------------------AIIAGYVQC 229
Query: 336 GRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYA 395
R++ AR FE +++SWN +I G+ +NG I AR F+ M +RD SW+A+I+GYA
Sbjct: 230 KRMDQARELFEAMPCQNVSSWNTMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYA 289
Query: 396 QNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDN 455
Q+ AL LF M G + N T S A L+ G+ H V+ +
Sbjct: 290 QSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCY 349
Query: 456 LSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEK 515
+ A++ MY KCG+I+ A+ VF I ++ V WN +I G A HG L ++ ++K
Sbjct: 350 VGNALLVMYCKCGNIDDAYIVFEGIEEK--EVVSWNTMIAGYARHGFGKEALMLFESMKK 407
Query: 516 RNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLE 575
I + +T +GVLS C H GLVD G YF SM Y + + KHY CM+DLLGRAG+L+
Sbjct: 408 TGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLD 467
Query: 576 DAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYA 635
DA+ ++++MP + D WG LL ASRIHGN E+GE+AAK + ++P + VLLSN+YA
Sbjct: 468 DAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAKMIFEMEPDNSGMYVLLSNLYA 527
Query: 636 DAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
+GRW D +R MRD G+K++PG+S V
Sbjct: 528 ASGRWGDVGRMRLRMRDRGVKKVPGYSWV 556
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 130/462 (28%), Positives = 222/462 (48%), Gaps = 43/462 (9%)
Query: 49 IFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDA 108
IF N+ N ++ Y + G I A+ +F+S + + ++ N M+ GY++ +RL DA
Sbjct: 83 IFDEMPCKNSISWNGMLAAYVQNGRIEDARRLFESKADWELISWNCMMGGYVKRNRLVDA 142
Query: 109 REVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHL 168
R +FD+ P + VS+ +MI G+AQN EA +F + + V T +++S V
Sbjct: 143 RGIFDRMPERDEVSWNTMISGYAQNGELLEAQRLFEESPVRDVF----TWTAMVSGYVQN 198
Query: 169 GGIWECR-MLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVM 227
G + E R + G+ K + II+ Y C + +AR LF+ M +N+ SWN M
Sbjct: 199 GMLDEARRVFDGMPEKNSVSWNAIIAG-----YVQCKRMDQARELFEAMPCQNVSSWNTM 253
Query: 228 LNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPND 287
+ G+A+ G + AR F+R+P +D +SW +I GY Q EAL ++ M DG N
Sbjct: 254 ITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNR 313
Query: 288 VMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFEL 347
+S C A G Q+H +VKAG + ++ ++ Y CG I+ A + FE
Sbjct: 314 STFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEG 373
Query: 348 GIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELF 407
+ + SWN +IAG+ R+G ++A LF +M+K
Sbjct: 374 IEEKEVVSWNTMIAGYARHGFGKEALMLFESMKK-------------------------- 407
Query: 408 HGMVDAGVKPNEITMVSVFCAIASSGTLKEG-RWAHEYVLNNSITLNDNLSAAIIDMYAK 466
G+ P+++TMV V A + +G + +G + + + IT N +ID+ +
Sbjct: 408 -----TGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGR 462
Query: 467 CGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLK 508
G ++ A + ++ + + W A++ +HG+ L K
Sbjct: 463 AGRLDDAQNLMKNMPFEPDAAT-WGALLGASRIHGNTELGEK 503
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 87/382 (22%), Positives = 153/382 (40%), Gaps = 115/382 (30%)
Query: 321 YDFIQATIIHFYAACGR---INLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFN 377
+DF++ H C R + ARL F+ + + SWNA+++G+ +NG +++A+++F+
Sbjct: 29 FDFLER---HDLRGCVRYRNLRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFD 85
Query: 378 NMQKRDVYSWSAMISGYAQNEQPNMALELFH---------------------------GM 410
M ++ SW+ M++ Y QN + A LF G+
Sbjct: 86 EMPCKNSISWNGMLAAYVQNGRIEDARRLFESKADWELISWNCMMGGYVKRNRLVDARGI 145
Query: 411 VDAGVKPNEITMVSVFCAIASSGTLKEGRWAHE----------------YVLN------- 447
D + +E++ ++ A +G L E + E YV N
Sbjct: 146 FDRMPERDEVSWNTMISGYAQNGELLEAQRLFEESPVRDVFTWTAMVSGYVQNGMLDEAR 205
Query: 448 ---------NSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLA 498
NS++ N AII Y +C ++ A E+F + +VS WN +I G A
Sbjct: 206 RVFDGMPEKNSVSWN-----AIIAGYVQCKRMDQARELFEAM--PCQNVSSWNTMITGYA 258
Query: 499 MHGD-------------------------------ANLTLKIYSDLEKRNIKLNSITFIG 527
+GD L ++ ++++ +LN TF
Sbjct: 259 QNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTS 318
Query: 528 VLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVD-----LLGRAGQLEDAEEVIR 582
LSTC ++LG++ + V+ L+ GC V + + G ++DA V
Sbjct: 319 TLSTCAEIAALELGKQVHGRV-----VKAGLES-GCYVGNALLVMYCKCGNIDDAYIVFE 372
Query: 583 SMPMKADVVIWGTLLAASRIHG 604
+ K +VV W T++A HG
Sbjct: 373 GIEEK-EVVSWNTMIAGYARHG 393
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 102/230 (44%), Gaps = 37/230 (16%)
Query: 25 ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSC 84
S L C+ A+ G+Q+H + K+GLES ++ N+L+ +Y KCG I A +F+
Sbjct: 315 TFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGI 374
Query: 85 STLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFR 144
+ V+ N MI+GY R+ GF +EAL +F
Sbjct: 375 EEKEVVSWNTMIAGYARH--------------------------GFG-----KEALMLFE 403
Query: 145 DMRILGVIPNEVTLASVISSSVHLGGIWE-CRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
M+ G++P++VT+ V+S+ H G + + + + I T ++++
Sbjct: 404 SMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRA 463
Query: 204 SSLVEARSLFDEMK-ERNIVSWNVMLNGFAKAGLVEL----ARELFERIP 248
L +A++L M E + +W +L G EL A+ +FE P
Sbjct: 464 GRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAKMIFEMEP 513
>gi|298204424|emb|CBI16904.3| unnamed protein product [Vitis vinifera]
Length = 843
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 229/730 (31%), Positives = 357/730 (48%), Gaps = 103/730 (14%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
+ CS A+ G+Q H+ + + + F+ N LI +Y KC + A +FD D
Sbjct: 49 FQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFDGMPQRDT 108
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
V+ N M+ GY + A+++FD P + VS+ S+I G+ N R+ ++VF M +
Sbjct: 109 VSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFLQMGRM 168
Query: 150 GVIPNEVTLASVISSSV----HLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSS 205
G + + T A V+ S H GGI +HGL +K+ D V+ + LL+MY C
Sbjct: 169 GTVFDRTTFAVVLKSCSSLEDHGGGI----QIHGLAVKMGFDCDVVTGSALLDMYAKCKK 224
Query: 206 LVEARSLFDEMKERNIVSWNVMLNGFAK----AGLVELARELFE---------------- 245
L + F M E+N VSW+ ++ G + G +EL +E+ +
Sbjct: 225 LDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFRS 284
Query: 246 -------RIPSK------------DVVSWGTMIDGYLQVERLSEA-----------LTMY 275
R+ S+ DVV +D Y++ LS+A L Y
Sbjct: 285 CAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQSY 344
Query: 276 RAMLC------DGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATII 329
A++ G+ ++V + AC EGLQ+H + +K+ + I+
Sbjct: 345 NAIIVGYARSDKGLGLDEVSLSGAFRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAIL 404
Query: 330 HFYAACGRINLARLQFELGIKDHIASWNALIAG-------------FIRN---------- 366
Y CG + A L FE + SWNA+IA FI N
Sbjct: 405 DMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFIHNRIIKSRLGLD 464
Query: 367 --------------GMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVD 412
GM+E A +L + + ++ V SW+A+ISG++ +Q A + F M++
Sbjct: 465 SFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLE 524
Query: 413 AGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINT 472
GV P+ T ++ A+ T++ G+ H ++ + + +S+ ++DMY+KCG++
Sbjct: 525 MGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQD 584
Query: 473 AFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTC 532
+F +R WNA++CG A HG LKI+ ++ N+K N TF+ VL C
Sbjct: 585 FQLIFEKAPNR--DFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRAC 642
Query: 533 CHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVI 592
H GLV+ G YF SM S Y ++P L+HY C+VD++GR+GQ+ A E+I MP +AD VI
Sbjct: 643 GHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVI 702
Query: 593 WGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRD 652
W TLL+ +IHGNVEV E+AA S+ L+P + VLLSNIYA+AG W + +RK MR
Sbjct: 703 WRTLLSICKIHGNVEVAEKAAYSILQLEPEDSAAYVLLSNIYANAGMWNEVTKLRKMMRF 762
Query: 653 CGMKRLPGFS 662
G+K+ PG S
Sbjct: 763 NGLKKEPGCS 772
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/335 (23%), Positives = 149/335 (44%), Gaps = 69/335 (20%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E++L A R C+ +G Q+H L KS +SN + N+++++Y KCG + +A +F+
Sbjct: 362 EVSLSGAFRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFE 421
Query: 83 SCSTLDPVACNIMISGYIRNDR-------------------------------------L 105
+ D V+ N +I+ + +N +
Sbjct: 422 EMVSRDAVSWNAIIAAHEQNGNEEKTLSLFIHNRIIKSRLGLDSFVGIALIDMYSKCGMM 481
Query: 106 NDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSS 165
A ++ D+ + VS+ ++I GF+ EA + F M +GV P+ T A+++ +
Sbjct: 482 EKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTC 541
Query: 166 VHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWN 225
+L + + +H +IK + IS+ L++MY C ++ + + +F++ R+ V+WN
Sbjct: 542 ANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWN 601
Query: 226 VMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAP 285
M+ G+A+ GL E A ++FE Y+Q+E + P
Sbjct: 602 AMVCGYAQHGLGEEALKIFE----------------YMQLEN---------------VKP 630
Query: 286 NDVMIVDLISACGRAMAFGEGLQ-IHSIIVKAGFD 319
N + ++ ACG +GL HS++ G D
Sbjct: 631 NHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLD 665
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 136/294 (46%), Gaps = 5/294 (1%)
Query: 293 LISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDH 352
+ C A G Q H+ ++ F F+ +I Y C + A F+ +
Sbjct: 48 IFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFDGMPQRD 107
Query: 353 IASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVD 412
SWNA++ G+ G I A++LF+ M +RDV SW+++ISGY N +++F M
Sbjct: 108 TVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFLQMGR 167
Query: 413 AGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINT 472
G + T V + +S G H + + +A++DMYAKC ++
Sbjct: 168 MGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCKKLDC 227
Query: 473 AFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTC 532
+ + F+H VS W+AII G + D L+++ +++K + ++ TF V +C
Sbjct: 228 SIQ-FFHSMPEKNWVS-WSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFRSC 285
Query: 533 CHAGLVDLGER-YFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMP 585
+ LG + + ++K+ + D+ +D+ + L DA+++ S+P
Sbjct: 286 AGLSALRLGSQLHGHALKTDFGT--DVVIGTATLDMYMKCNNLSDAQKLFNSLP 337
Score = 46.6 bits (109), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 54/120 (45%), Gaps = 2/120 (1%)
Query: 421 TMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHI 480
T +F + L G+ AH ++ ++ +I MY KC + AF+VF +
Sbjct: 44 TFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFDGM 103
Query: 481 RDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDL 540
R T WNA++ G A GD + K++ + +R++ + G L H ++D+
Sbjct: 104 PQRDT--VSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDV 161
>gi|297831842|ref|XP_002883803.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329643|gb|EFH60062.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 697
Score = 353 bits (906), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 213/626 (34%), Positives = 327/626 (52%), Gaps = 42/626 (6%)
Query: 45 IHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDR 104
+H+ + KSG + FIQN LI+ YAKCG + + +FD + N +++G +
Sbjct: 42 VHASVIKSGFSNEVFIQNRLIDAYAKCGSLEDGRQLFDKMPQRNVFTWNSVVTGLTKLGF 101
Query: 105 LNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISS 164
L++A +F P + ++ SM+ GFAQ+D EAL F M G + NE T AS +S+
Sbjct: 102 LDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALYYFAMMHKEGFVLNEYTFASGLSA 161
Query: 165 SVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSW 224
L + +H L+ K V I + L++MY C
Sbjct: 162 CSGLNDMNRGVQIHSLIAKSPCLSDVYIGSALVDMYSKC--------------------- 200
Query: 225 NVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIA 284
G V A+++F+ + ++VVSW ++I Y Q EAL +++ ML +
Sbjct: 201 ----------GNVNDAQQVFDEMGDRNVVSWNSLITCYEQNGPAVEALKVFQVMLESWVE 250
Query: 285 PNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQA-TIIHFYAACGRINLARL 343
P++V + +ISAC A G ++H+ +VK D I + + YA C RI AR
Sbjct: 251 PDEVTLASVISACASLSAIKVGQEVHARVVKMDKLRNDIILSNAFVDMYAKCSRIKEARF 310
Query: 344 QFE-LGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNM 402
F+ + I++ IA ++++G+ + AR +F M +R+V SW+A+I+GY QN +
Sbjct: 311 IFDSMPIRNVIAE-TSMVSGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEE 369
Query: 403 ALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDN------L 456
AL LF + V P T ++ A A L G AH +VL + +
Sbjct: 370 ALSLFCLLKRESVCPTHYTFANILKACADLADLHLGMQAHVHVLKHGFKFQSGEEDDIFV 429
Query: 457 SAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKR 516
++IDMY KCG + + VF + +R WNA+I G A +G N L+++ ++
Sbjct: 430 GNSLIDMYVKCGCVEEGYLVFRKMMER--DCVSWNAMIIGFAQNGYGNEALELFREMLDS 487
Query: 517 NIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLED 576
K + IT IGVLS C HAG V+ G YF SM + V P HY CMVDLLGRAG LE+
Sbjct: 488 GEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEE 547
Query: 577 AEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYAD 636
A+ +I MP++ D VIWG+LLAA ++H N+ +G+ A+ L ++ S+ VLLSN+YA+
Sbjct: 548 AKSIIEEMPVQPDSVIWGSLLAACKVHRNITLGKYVAEKLFEVETSNSGPYVLLSNMYAE 607
Query: 637 AGRWEDAFSIRKEMRDCGMKRLPGFS 662
G+W DA ++RK MR G+ + PG S
Sbjct: 608 LGKWGDAMNVRKLMRKEGVTKQPGCS 633
Score = 219 bits (559), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 149/491 (30%), Positives = 247/491 (50%), Gaps = 63/491 (12%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E S L CS +++G QIHSLI KS S+ +I ++L+++Y+KCG ++ A+ +FD
Sbjct: 152 EYTFASGLSACSGLNDMNRGVQIHSLIAKSPCLSDVYIGSALVDMYSKCGNVNDAQQVFD 211
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
E+ D+ + S+ S+I + QN EAL+V
Sbjct: 212 ---------------------------EMGDRNVV----SWNSLITCYEQNGPAVEALKV 240
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKL-MIDGFVIISTNLLNMYC 201
F+ M V P+EVTLASVIS+ L I + +H V+K+ + +I+S ++MY
Sbjct: 241 FQVMLESWVEPDEVTLASVISACASLSAIKVGQEVHARVVKMDKLRNDIILSNAFVDMYA 300
Query: 202 VCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDG 261
CS + EAR +FD M RN+++ M++G+A A + AR +F ++ ++VVSW +I G
Sbjct: 301 KCSRIKEARFIFDSMPIRNVIAETSMVSGYAMAASTKAARLMFTKMAERNVVSWNALIAG 360
Query: 262 YLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCY 321
Y Q EAL+++ + + + P +++ AC G+Q H ++K GF
Sbjct: 361 YTQNGENEEALSLFCLLKRESVCPTHYTFANILKACADLADLHLGMQAHVHVLKHGF--- 417
Query: 322 DFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQK 381
+F+ G +D I N+LI +++ G +E+ +F M +
Sbjct: 418 ----------------------KFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMME 455
Query: 382 RDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWA 441
RD SW+AMI G+AQN N ALELF M+D+G KP+ ITM+ V A +G ++EGR
Sbjct: 456 RDCVSWNAMIIGFAQNGYGNEALELFREMLDSGEKPDHITMIGVLSACGHAGFVEEGRHY 515
Query: 442 HEYVLNN--SITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAM 499
+ + L D+ + ++D+ + G + A + + + SV W +++ +
Sbjct: 516 FSSMTRDFGVAPLRDHYT-CMVDLLGRAGFLEEAKSIIEEMPVQPDSV-IWGSLLAACKV 573
Query: 500 HGDANLTLKIY 510
H N+TL Y
Sbjct: 574 H--RNITLGKY 582
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 134/489 (27%), Positives = 218/489 (44%), Gaps = 71/489 (14%)
Query: 173 ECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFA 232
+ R +H VIK V I L++ Y C SL + R LFD+M +RN+ +WN ++ G
Sbjct: 38 DVRCVHASVIKSGFSNEVFIQNRLIDAYAKCGSLEDGRQLFDKMPQRNVFTWNSVVTGLT 97
Query: 233 KAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVD 292
K G ++ A LF +P +D +W +M+ G+ Q +R EAL + M +G N+
Sbjct: 98 KLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALYYFAMMHKEGFVLNEYTFAS 157
Query: 293 LISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDH 352
+SAC G+QIHS+I K+ +I + ++ Y+ CG +N A+ F+ +
Sbjct: 158 GLSACSGLNDMNRGVQIHSLIAKSPCLSDVYIGSALVDMYSKCGNVNDAQQVFDEMGDRN 217
Query: 353 IASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVD 412
+ SWN+LI + Y QN AL++F M++
Sbjct: 218 VVSWNSLI-------------------------------TCYEQNGPAVEALKVFQVMLE 246
Query: 413 AGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLND-NLSAAIIDMYAKCGSIN 471
+ V+P+E+T+ SV A AS +K G+ H V+ ND LS A +DMYAKC I
Sbjct: 247 SWVEPDEVTLASVISACASLSAIKVGQEVHARVVKMDKLRNDIILSNAFVDMYAKCSRIK 306
Query: 472 TAFEVFYHIRDRTT-----------------------------SVSPWNAIICGLAMHGD 502
A +F + R +V WNA+I G +G+
Sbjct: 307 EARFIFDSMPIRNVIAETSMVSGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGE 366
Query: 503 ANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLG-ERYFKSMKSVYNV----EPD 557
L ++ L++ ++ TF +L C + LG + + +K + E D
Sbjct: 367 NEEALSLFCLLKRESVCPTHYTFANILKACADLADLHLGMQAHVHVLKHGFKFQSGEEDD 426
Query: 558 LKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLA--ASRIHGNVEVGERAAKS 615
+ ++D+ + G +E+ V R M M+ D V W ++ A +GN E E +
Sbjct: 427 IFVGNSLIDMYVKCGCVEEGYLVFRKM-MERDCVSWNAMIIGFAQNGYGN-EALELFREM 484
Query: 616 L-AGLQPSH 623
L +G +P H
Sbjct: 485 LDSGEKPDH 493
>gi|356541109|ref|XP_003539025.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g18840-like [Glycine max]
Length = 681
Score = 353 bits (906), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 204/630 (32%), Positives = 354/630 (56%), Gaps = 17/630 (2%)
Query: 46 HSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRL 105
H KSGL S+ F N LI+LY+ GL+ +A +FD + + N +I YI+ L
Sbjct: 6 HVQAIKSGLVSSIFTCNQLIHLYSNHGLLQEAHKLFDEMPHPNVFSWNAIIMAYIKAHNL 65
Query: 106 NDAREVFDKTPIKCCVSYTSMIMGFAQNDCWR-EALEVFRDMR----ILGVIPNEVTLAS 160
AR +FD + VSY S++ + +D + EAL++F M+ +G+ +E+TL +
Sbjct: 66 TQARALFDSASHRDLVSYNSLLSAYVGSDGYETEALDLFTRMQSARDTIGI--DEITLTN 123
Query: 161 VISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLF---DEMK 217
+++ + L + + +H ++K D ++L++MY C EA +LF DEM
Sbjct: 124 MLNLAAKLRVLCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGCFQEACNLFGSCDEMV 183
Query: 218 ERNIVSWNVMLNGFAKAGLVELARELFERIPS-KDVVSWGTMIDGYLQVERLSEALTMYR 276
+ +VS N M+ + G +++A +F + P KD VSW T+I GY Q + ++LT +
Sbjct: 184 D--LVSKNAMVAACCREGKMDMALNVFWKNPELKDTVSWNTLIAGYSQNGYMEKSLTFFV 241
Query: 277 AMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACG 336
M+ +GI N+ + +++AC G +H+ ++K G+ FI + ++ FY+ CG
Sbjct: 242 EMIENGIDFNEHTLASVLNACSALKCSKLGKSVHAWVLKKGYSSNQFISSGVVDFYSKCG 301
Query: 337 RINLARLQF-ELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYA 395
I A L + ++GIK A +LIA + G + +A++LF+++ +R+ W+A+ SGY
Sbjct: 302 NIRYAELVYAKIGIKSPFAV-ASLIAAYSSQGNMTEAQRLFDSLLERNSVVWTALCSGYV 360
Query: 396 QNEQPNMALELFHGM-VDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLND 454
+++Q +LF + P+ + +VS+ A A L G+ H Y+L ++
Sbjct: 361 KSQQCEAVFKLFREFRTKEALVPDAMIIVSILGACAIQADLSLGKQIHAYILRMRFKVDK 420
Query: 455 NLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLE 514
L ++++DMY+KCG++ A ++F + D +N II G A HG N ++++ ++
Sbjct: 421 KLLSSLVDMYSKCGNVAYAEKLFRLVTDSDRDAILYNVIIAGYAHHGFENKAIELFQEML 480
Query: 515 KRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQL 574
+++K +++TF+ +LS C H GLV+LGE++F SM+ YNV P++ HY CMVD+ GRA QL
Sbjct: 481 NKSVKPDAVTFVALLSACRHRGLVELGEQFFMSMEH-YNVLPEIYHYACMVDMYGRANQL 539
Query: 575 EDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIY 634
E A E +R +P+K D IWG L A ++ + + ++A + L ++ +G V L+N Y
Sbjct: 540 EKAVEFMRKIPIKIDATIWGAFLNACQMSSDAALVKQAEEELLKVEADNGSRYVQLANAY 599
Query: 635 ADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
A G+W++ IRK+MR K+L G S +
Sbjct: 600 AAKGKWDEMGRIRKKMRGHEAKKLAGCSWI 629
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 122/511 (23%), Positives = 239/511 (46%), Gaps = 46/511 (9%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E+ L + L + + G+Q+HS + K+ + + F +SLI++Y+KCG +A ++F
Sbjct: 118 EITLTNMLNLAAKLRVLCYGKQMHSYMVKTANDLSKFALSSLIDMYSKCGCFQEACNLFG 177
Query: 83 SCSTL-DPVACNIMISGYIRNDRLNDAREVFDKTP-IKCCVSYTSMIMGFAQNDCWREAL 140
SC + D V+ N M++ R +++ A VF K P +K VS+ ++I G++QN ++L
Sbjct: 178 SCDEMVDLVSKNAMVAACCREGKMDMALNVFWKNPELKDTVSWNTLIAGYSQNGYMEKSL 237
Query: 141 EVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMY 200
F +M G+ NE TLASV+++ L + +H V+K IS+ +++ Y
Sbjct: 238 TFFVEMIENGIDFNEHTLASVLNACSALKCSKLGKSVHAWVLKKGYSSNQFISSGVVDFY 297
Query: 201 CVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMID 260
C ++ A ++ ++ ++ + ++ ++ G + A+ LF+ + ++ V W +
Sbjct: 298 SKCGNIRYAELVYAKIGIKSPFAVASLIAAYSSQGNMTEAQRLFDSLLERNSVVWTALCS 357
Query: 261 GYLQVERLSEALTMYRAMLC-DGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFD 319
GY++ ++ ++R + + P+ ++IV ++ AC G QIH+ I++ F
Sbjct: 358 GYVKSQQCEAVFKLFREFRTKEALVPDAMIIVSILGACAIQADLSLGKQIHAYILRMRFK 417
Query: 320 CYDFIQATIIHFYAACGRINLARLQFEL---GIKDHIASWNALIAGFIRNGMIEDARQLF 376
+ ++++ Y+ CG + A F L +D I +N +IAG+ +G
Sbjct: 418 VDKKLLSSLVDMYSKCGNVAYAEKLFRLVTDSDRDAIL-YNVIIAGYAHHGF-------- 468
Query: 377 NNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLK 436
N A+ELF M++ VKP+ +T V++ A G ++
Sbjct: 469 -----------------------ENKAIELFQEMLNKSVKPDAVTFVALLSACRHRGLVE 505
Query: 437 EGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICG 496
G + + ++ A ++DMY + + A E I + + + W A +
Sbjct: 506 LGEQFFMSMEHYNVLPEIYHYACMVDMYGRANQLEKAVEFMRKIPIKIDA-TIWGAFLNA 564
Query: 497 LAMHGDANLT-------LKIYSDLEKRNIKL 520
M DA L LK+ +D R ++L
Sbjct: 565 CQMSSDAALVKQAEEELLKVEADNGSRYVQL 595
>gi|359488035|ref|XP_003633690.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Vitis vinifera]
Length = 731
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 191/539 (35%), Positives = 297/539 (55%), Gaps = 35/539 (6%)
Query: 126 MIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLM 185
+I + + + R AL V+ +R + + SV+ + + + +HG V+K
Sbjct: 95 VITSYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKACGQVSWTQLGKEIHGFVLKKG 154
Query: 186 IDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFE 245
+D V + L+ MY C+ VE AR +F+
Sbjct: 155 LDRDVFVGNALMLMYGECAC-------------------------------VEYARLVFD 183
Query: 246 RIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGE 305
++ +DVVSW TMI + + AL + R M + P++V +V +++
Sbjct: 184 KMMERDVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRM 243
Query: 306 GLQIHSIIVKAGFDCYDFIQAT--IIHFYAACGRINLARLQFELGIKDHIASWNALIAGF 363
G +H+ +++ + + + T ++ YA CG + LAR F + + SW A+IAG
Sbjct: 244 GKAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGC 303
Query: 364 IRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMV 423
IR+ +E+AR LF++ Q RDV W+AM+S YAQ + A LF M +GV+P ++T+V
Sbjct: 304 IRSNRLEEARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIV 363
Query: 424 SVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDR 483
S+ A +G L G+W H Y+ + ++ L+ A++DMYAKCG IN A +F R
Sbjct: 364 SLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISR 423
Query: 484 TTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGER 543
+ WNAII G AMHG L I++++E++ +K N ITFIG+L C HAGLV G++
Sbjct: 424 --DICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKK 481
Query: 544 YFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIH 603
F+ M + + P ++HYGCMVDLLGRAG L++A E+I+SMP+K + ++WG L+AA R+H
Sbjct: 482 LFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLH 541
Query: 604 GNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
N ++GE AA L ++P + VL+SNIYA A RW DA +RK M+ GMK+ PG S
Sbjct: 542 KNPQLGELAATQLLEIEPENCGYNVLMSNIYAAANRWSDAAGVRKTMKTVGMKKEPGHS 600
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 128/497 (25%), Positives = 223/497 (44%), Gaps = 69/497 (13%)
Query: 15 ANLQNSDYEL---ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKC 71
A L+ D+E+ S L+ C G++IH + K GL+ + F+ N+L+ +Y +C
Sbjct: 113 AQLRKMDFEVDNFMAPSVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGEC 172
Query: 72 GLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFA 131
+ A R VFDK + VS+++MI +
Sbjct: 173 ACVEYA-------------------------------RLVFDKMMERDVVSWSTMIRSLS 201
Query: 132 QNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGF-- 189
+N + ALE+ R+M + V P+EV + S+++ + + +H VI+ +
Sbjct: 202 RNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMG 261
Query: 190 VIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPS 249
V +T LL+MY C L AR LF+ + ++ +VSW M+ G ++ +E AR LF+ +
Sbjct: 262 VPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEARALFDSTQN 321
Query: 250 KDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQI 309
+DV+ W M+ Y Q + +A ++ M G+ P V IV L+S C A A G +
Sbjct: 322 RDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWV 381
Query: 310 HSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMI 369
HS I K + + ++ YA CG IN A F I I WNA+I GF +G
Sbjct: 382 HSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYG 441
Query: 370 EDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAI 429
E+A +F M+++ GVKPN+IT + + A
Sbjct: 442 EEALDIFAEMERQ-------------------------------GVKPNDITFIGLLHAC 470
Query: 430 ASSGTLKEGRWAHEYVLNN-SITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVS 488
+ +G + EG+ E +++ + ++D+ + G ++ A E+ + + ++
Sbjct: 471 SHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIV 530
Query: 489 PWNAIICGLAMHGDANL 505
W A++ +H + L
Sbjct: 531 -WGALVAACRLHKNPQL 546
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 97/417 (23%), Positives = 171/417 (41%), Gaps = 82/417 (19%)
Query: 246 RIPSKDVVS-------WGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACG 298
+IP D S W +I Y + + AL +Y + ++ M ++ ACG
Sbjct: 76 QIPLNDFPSGLSPSAQWNFVITSYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKACG 135
Query: 299 RAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNA 358
+ G +IH ++K G D F+ ++ Y C + ARL F+ ++ + SW
Sbjct: 136 QVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSW-- 193
Query: 359 LIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPN 418
S MI ++N++ +MALEL M V+P+
Sbjct: 194 -----------------------------STMIRSLSRNKEFDMALELIREMNFMQVRPS 224
Query: 419 EITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNL----SAAIIDMYAKCGSINTAF 474
E+ MVS+ A + ++ G+ H YV+ NS N+++ + A++DMYAKCG + A
Sbjct: 225 EVAMVSMVNLFADTANMRMGKAMHAYVIRNSN--NEHMGVPTTTALLDMYAKCGHLGLAR 282
Query: 475 EVFYHIRDRTTSVSPWNAIICG----------------------------LAMHGDANL- 505
++F + +T V W A+I G L+ + AN
Sbjct: 283 QLFNGLTQKT--VVSWTAMIAGCIRSNRLEEARALFDSTQNRDVMIWTAMLSAYAQANCI 340
Query: 506 --TLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGC 563
++ + ++ +T + +LS C AG +DLG ++ S VE D
Sbjct: 341 DQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLG-KWVHSYIDKERVEVDCILNTA 399
Query: 564 MVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQ 620
+VD+ + G + A + + D+ +W ++ +HG GE A A ++
Sbjct: 400 LVDMYAKCGDINAAGRLFIE-AISRDICMWNAIITGFAMHG---YGEEALDIFAEME 452
>gi|328774749|gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygrometrica]
Length = 771
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 202/633 (31%), Positives = 334/633 (52%), Gaps = 95/633 (15%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
L+ C+ ++ QG+++H+ I KSG++ N +++N+L+++YAKCG
Sbjct: 103 LQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCG----------------- 145
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
L DAR VFD + VS+T+MI F + EA + + M++
Sbjct: 146 --------------SLTDARRVFDGIRDRNIVSWTAMIEAFVAGNQNLEAYKCYETMKLA 191
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
G P++VT S++++ + + + +H + K ++ + T+L+ MY
Sbjct: 192 GCKPDKVTFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRVGTSLVGMY--------- 242
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLS 269
AK G + A+ +F+++P K+VV+W +I GY Q ++
Sbjct: 243 ----------------------AKCGDISKAQVIFDKLPEKNVVTWTLLIAGYAQQGQVD 280
Query: 270 EALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATII 329
AL + M +APN + ++ C +A G ++H I+++G+
Sbjct: 281 VALELLEKMQQAEVAPNKITYTSILQGCTTPLALEHGKKVHRYIIQSGY----------- 329
Query: 330 HFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSA 389
GR I NALI + + G +++AR+LF ++ RDV +W+A
Sbjct: 330 ------GR--------------EIWVVNALITMYCKCGGLKEARKLFGDLPHRDVVTWTA 369
Query: 390 MISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNS 449
M++GYAQ + A++LF M G+KP+++T S + +S L+EG+ H+ +++
Sbjct: 370 MVTGYAQLGFHDEAIDLFRRMQQQGIKPDKMTFTSALTSCSSPAFLQEGKSIHQQLVHAG 429
Query: 450 ITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKI 509
+L+ L +A++ MYAKCGS++ A VF + +R +V W A+I G A HG L+
Sbjct: 430 YSLDVYLQSALVSMYAKCGSMDDARLVFNQMSER--NVVAWTAMITGCAQHGRCREALEY 487
Query: 510 YSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLG 569
+ ++K+ IK + +TF VLS C H GLV+ G ++F+SM Y ++P ++HY C VDLLG
Sbjct: 488 FEQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLG 547
Query: 570 RAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVL 629
RAG LE+AE VI +MP + +WG LL+A RIH +VE GERAA+++ L P + V
Sbjct: 548 RAGHLEEAENVILTMPFQPGPSVWGALLSACRIHSDVERGERAAENVLKLDPDDDGAYVA 607
Query: 630 LSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
LSNIYA AGR+EDA +R+ M + + PG S
Sbjct: 608 LSNIYAAAGRYEDAEKVRQVMEKRDVVKEPGQS 640
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 118/490 (24%), Positives = 209/490 (42%), Gaps = 74/490 (15%)
Query: 137 REALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNL 196
+EAL + M + G ++ L + + R +H ++K I + L
Sbjct: 78 KEALGILNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLENTL 137
Query: 197 LNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWG 256
L+MY C SL +AR +FD +++RNIVSW M+ F AG L
Sbjct: 138 LSMYAKCGSLTDARRVFDGIRDRNIVSWTAMIEAFV-AGNQNL----------------- 179
Query: 257 TMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKA 316
EA Y M G P+ V V L++A G ++H I KA
Sbjct: 180 -------------EAYKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQVGQKVHMEIAKA 226
Query: 317 GFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLF 376
G + + +++ YA CG I+ A++ F+ + ++ +W LIAG+ + G +
Sbjct: 227 GLELEPRVGTSLVGMYAKCGDISKAQVIFDKLPEKNVVTWTLLIAGYAQQGQV------- 279
Query: 377 NNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLK 436
++ALEL M A V PN+IT S+ + L+
Sbjct: 280 ------------------------DVALELLEKMQQAEVAPNKITYTSILQGCTTPLALE 315
Query: 437 EGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICG 496
G+ H Y++ + + A+I MY KCG + A ++F + R V W A++ G
Sbjct: 316 HGKKVHRYIIQSGYGREIWVVNALITMYCKCGGLKEARKLFGDLPHR--DVVTWTAMVTG 373
Query: 497 LAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSM-KSVYNVE 555
A G + + ++ ++++ IK + +TF L++C + G+ + + + Y+++
Sbjct: 374 YAQLGFHDEAIDLFRRMQQQGIKPDKMTFTSALTSCSSPAFLQEGKSIHQQLVHAGYSLD 433
Query: 556 PDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGN----VEVGER 611
L+ +V + + G ++DA V M + +VV W ++ HG +E E+
Sbjct: 434 VYLQ--SALVSMYAKCGSMDDARLVFNQMSER-NVVAWTAMITGCAQHGRCREALEYFEQ 490
Query: 612 AAKSLAGLQP 621
K G++P
Sbjct: 491 MKKQ--GIKP 498
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 79/335 (23%), Positives = 155/335 (46%), Gaps = 39/335 (11%)
Query: 267 RLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQA 326
RL EAL + M+ G + L+ C R + +G ++H+ I+K+G +++
Sbjct: 76 RLKEALGILNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLEN 135
Query: 327 TIIHFYAACGRINLARLQFELGIKD-HIASWNALIAGFIRNGMIEDARQLFNNMQKRDVY 385
T++ YA CG + AR F+ GI+D +I SW A+I F+ +A + + M+
Sbjct: 136 TLLSMYAKCGSLTDARRVFD-GIRDRNIVSWTAMIEAFVAGNQNLEAYKCYETMKL---- 190
Query: 386 SWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYV 445
AG KP+++T VS+ A + L+ G+ H +
Sbjct: 191 ---------------------------AGCKPDKVTFVSLLNAFTNPELLQVGQKVHMEI 223
Query: 446 LNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANL 505
+ L + +++ MYAKCG I+ A +F + ++ +V W +I G A G ++
Sbjct: 224 AKAGLELEPRVGTSLVGMYAKCGDISKAQVIFDKLPEK--NVVTWTLLIAGYAQQGQVDV 281
Query: 506 TLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKS-MKSVYNVEPDLKHYGCM 564
L++ +++ + N IT+ +L C ++ G++ + ++S Y E + +
Sbjct: 282 ALELLEKMQQAEVAPNKITYTSILQGCTTPLALEHGKKVHRYIIQSGYGRE--IWVVNAL 339
Query: 565 VDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAA 599
+ + + G L++A ++ +P + DVV W ++
Sbjct: 340 ITMYCKCGGLKEARKLFGDLPHR-DVVTWTAMVTG 373
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 123/258 (47%), Gaps = 12/258 (4%)
Query: 379 MQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG 438
+K D + S +S + + AL + + M+ G + + A +L++G
Sbjct: 56 FRKVDTLANSGDVSILCKQGRLKEALGILNTMILQGTRVYSDVFRGLLQECARLRSLEQG 115
Query: 439 RWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLA 498
R H +L + I N L ++ MYAKCGS+ A VF IRDR ++ W A+I
Sbjct: 116 REVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDGIRDR--NIVSWTAMIEAFV 173
Query: 499 MHGDANL-TLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGER-YFKSMKSVYNVEP 556
G+ NL K Y ++ K + +TF+ +L+ + L+ +G++ + + K+ +EP
Sbjct: 174 A-GNQNLEAYKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEP 232
Query: 557 DLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSL 616
+ +V + + G + A+ + +P K +VV W L+A G V+V A + L
Sbjct: 233 RVG--TSLVGMYAKCGDISKAQVIFDKLPEK-NVVTWTLLIAGYAQQGQVDV---ALELL 286
Query: 617 AGLQPSH-GPSRVLLSNI 633
+Q + P+++ ++I
Sbjct: 287 EKMQQAEVAPNKITYTSI 304
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 76/153 (49%), Gaps = 31/153 (20%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
++ SAL CS+ + +G+ IH + +G + ++Q++L+++YAKCG + A+ +F+
Sbjct: 399 KMTFTSALTSCSSPAFLQEGKSIHQQLVHAGYSLDVYLQSALVSMYAKCGSMDDARLVFN 458
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
S + VA MI+G C AQ+ REALE
Sbjct: 459 QMSERNVVAWTAMITG--------------------C-----------AQHGRCREALEY 487
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECR 175
F M+ G+ P++VT SV+S+ H+G + E R
Sbjct: 488 FEQMKKQGIKPDKVTFTSVLSACTHVGLVEEGR 520
>gi|326522488|dbj|BAK07706.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 799
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 201/610 (32%), Positives = 329/610 (53%), Gaps = 4/610 (0%)
Query: 56 SNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKT 115
++ F + +++ + K G I+ A+ +FD V+ M+ ++ R+ +A E++++
Sbjct: 150 ASPFTYDFMVHEHVKAGDIASARGLFDGMPERSVVSYTTMVDALMKRGRVAEAVELYEQC 209
Query: 116 PIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECR 175
P +T+ I GF +N+ AL VFR M GV PN +T +I + V G
Sbjct: 210 PSGSVAFFTATISGFVRNELHHNALGVFRKMVSCGVRPNGITFVCMIKACVGAGEFGLAM 269
Query: 176 MLHGLVIKL-MIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKA 234
+ G IK + + + +L+ +Y AR +FDEM +++VSW +L+ ++++
Sbjct: 270 SIVGSAIKSNFFESSIEVQNSLITLYLRMGDAAAARKVFDEMDVKDVVSWTALLDVYSES 329
Query: 235 GLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLI 294
G ++ AR + + +P ++ VSWGT+I + Q +EA+ +Y ML DG PN ++
Sbjct: 330 GDLDGARRVLDAMPERNEVSWGTLIARHEQRGNAAEAVKLYSQMLADGCRPNISCFSSVL 389
Query: 295 SACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIA 354
SAC G +IH+ +K G F+ +++I Y C + A+ F+ + +I
Sbjct: 390 SACATLEDLRGGARIHARSLKMGSSTNVFVSSSLIDMYCKCKKCRDAQTIFDTLPEKNIV 449
Query: 355 SWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAG 414
WN+L +G+ NG + +A LF M R++ SW+ +ISGYAQN Q AL F+ M+ +G
Sbjct: 450 CWNSLASGYSYNGKMVEAMYLFKKMPARNLASWNTIISGYAQNRQFVDALRSFNAMLASG 509
Query: 415 VKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAF 474
P EIT SV A A+ +L G+ AH + + + + A+ DMYAK G + ++
Sbjct: 510 QVPGEITFSSVLLACANLCSLVTGKMAHAKTIKLGMEESIFIGTALSDMYAKSGDLQSSK 569
Query: 475 EVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCH 534
+FY + +R W A+I GLA +G A ++ ++ D+ + N TF+ +L C H
Sbjct: 570 RMFYQMPERNDVT--WTAMIQGLAENGLAEESILLFEDMMATGMTPNEHTFLALLFACSH 627
Query: 535 AGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWG 594
GLV+ YF+ M++ + + P KHY CMVD+L RAG+L +AE ++ P K++ W
Sbjct: 628 GGLVEQAIHYFEKMQA-WGISPKEKHYTCMVDVLARAGRLIEAEALLMKTPSKSEANSWA 686
Query: 595 TLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCG 654
LL+A + N E+GERAAK L L + VLLSN+YA GRW+DA IR M+
Sbjct: 687 ALLSACNTYKNEEIGERAAKRLHELGKDNTAGYVLLSNMYASCGRWKDAARIRVLMKGTT 746
Query: 655 MKRLPGFSGV 664
+K+ G S V
Sbjct: 747 LKKDGGCSWV 756
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 111/401 (27%), Positives = 197/401 (49%), Gaps = 8/401 (1%)
Query: 42 GQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIR 101
G I S F+S +E +QNSLI LY + G + A+ +FD D V+ ++ Y
Sbjct: 273 GSAIKSNFFESSIE----VQNSLITLYLRMGDAAAARKVFDEMDVKDVVSWTALLDVYSE 328
Query: 102 NDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASV 161
+ L+ AR V D P + VS+ ++I Q EA++++ M G PN +SV
Sbjct: 329 SGDLDGARRVLDAMPERNEVSWGTLIARHEQRGNAAEAVKLYSQMLADGCRPNISCFSSV 388
Query: 162 ISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNI 221
+S+ L + +H +K+ V +S++L++MYC C +A+++FD + E+NI
Sbjct: 389 LSACATLEDLRGGARIHARSLKMGSSTNVFVSSSLIDMYCKCKKCRDAQTIFDTLPEKNI 448
Query: 222 VSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCD 281
V WN + +G++ G + A LF+++P++++ SW T+I GY Q + +AL + AML
Sbjct: 449 VCWNSLASGYSYNGKMVEAMYLFKKMPARNLASWNTIISGYAQNRQFVDALRSFNAMLAS 508
Query: 282 GIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLA 341
G P ++ ++ AC + G H+ +K G + FI + YA G + +
Sbjct: 509 GQVPGEITFSSVLLACANLCSLVTGKMAHAKTIKLGMEESIFIGTALSDMYAKSGDLQSS 568
Query: 342 RLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDV----YSWSAMISGYAQN 397
+ F + + +W A+I G NG+ E++ LF +M + +++ A++ +
Sbjct: 569 KRMFYQMPERNDVTWTAMIQGLAENGLAEESILLFEDMMATGMTPNEHTFLALLFACSHG 628
Query: 398 EQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG 438
A+ F M G+ P E + +A +G L E
Sbjct: 629 GLVEQAIHYFEKMQAWGISPKEKHYTCMVDVLARAGRLIEA 669
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 89/336 (26%), Positives = 152/336 (45%), Gaps = 32/336 (9%)
Query: 28 SALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTL 87
S L C+ + G +IH+ K G +N F+ +SLI++Y KC A+++FD+
Sbjct: 387 SVLSACATLEDLRGGARIHARSLKMGSSTNVFVSSSLIDMYCKCKKCRDAQTIFDTLPEK 446
Query: 88 DPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMR 147
+ V N + SGY N ++ +A +F K P + S+ ++I G+AQN + +AL F M
Sbjct: 447 NIVCWNSLASGYSYNGKMVEAMYLFKKMPARNLASWNTIISGYAQNRQFVDALRSFNAML 506
Query: 148 ILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLV 207
G +P E+T +SV+ + +L + +M H IKL ++ + I T L +MY L
Sbjct: 507 ASGQVPGEITFSSVLLACANLCSLVTGKMAHAKTIKLGMEESIFIGTALSDMYAKSGDLQ 566
Query: 208 EARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVER 267
++ +F +M ERN V+W M+ G A+ GL E
Sbjct: 567 SSKRMFYQMPERNDVTWTAMIQGLAENGLAE----------------------------- 597
Query: 268 LSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQAT 327
E++ ++ M+ G+ PN+ + L+ AC + + + G +
Sbjct: 598 --ESILLFEDMMATGMTPNEHTFLALLFACSHGGLVEQAIHYFEKMQAWGISPKEKHYTC 655
Query: 328 IIHFYAACGR-INLARLQFELGIKDHIASWNALIAG 362
++ A GR I L + K SW AL++
Sbjct: 656 MVDVLARAGRLIEAEALLMKTPSKSEANSWAALLSA 691
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 117/297 (39%), Gaps = 74/297 (24%)
Query: 10 FNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYA 69
FN+ A+ Q E+ S L C+ ++ G+ H+ K G+E + FI +L ++YA
Sbjct: 502 FNAMLASGQVPG-EITFSSVLLACANLCSLVTGKMAHAKTIKLGMEESIFIGTALSDMYA 560
Query: 70 KCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMG 129
K G + +K MF RND V++T+MI G
Sbjct: 561 KSGDLQSSKRMFYQMPE--------------RND-----------------VTWTAMIQG 589
Query: 130 FAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGF 189
A+N E++ +F DM G+ PNE T +++ + H GG+ E
Sbjct: 590 LAENGLAEESILLFEDMMATGMTPNEHTFLALLFACSH-GGLVE---------------- 632
Query: 190 VIISTNLLNMYCVCSSLVEARSLFDEMKERNIVS----WNVMLNGFAKAGLVELARELFE 245
+A F++M+ I + M++ A+AG + A L
Sbjct: 633 ------------------QAIHYFEKMQAWGISPKEKHYTCMVDVLARAGRLIEAEALLM 674
Query: 246 RIPSK-DVVSWGTMIDG--YLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGR 299
+ PSK + SW ++ + E + E L V++ ++ ++CGR
Sbjct: 675 KTPSKSEANSWAALLSACNTYKNEEIGERAAKRLHELGKDNTAGYVLLSNMYASCGR 731
>gi|359479564|ref|XP_002274514.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 616
Score = 352 bits (904), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 190/485 (39%), Positives = 292/485 (60%), Gaps = 12/485 (2%)
Query: 192 ISTN-LLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGF-------AKAGLVELAREL 243
ISTN ++++ C SL E R + +M + N+++ ++ +G ++ A +
Sbjct: 4 ISTNPVVSVLDKCKSLCELRQIHAQMIKTNLLNHQFTVSRLIAFCSLSGVSGGLDYASSV 63
Query: 244 FERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAML-CDGIAPN-DVMIVDLISACGRAM 301
F RI + + +I G+ E+L +Y ML C + + I ++ ACG+ +
Sbjct: 64 FSRIQHPNSFIFFALIKGFSDTSNPVESLILYARMLSCLNYSSGVEFSIPSVLKACGKLL 123
Query: 302 AFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIA 361
AF EG Q+H ++K F+ +++ Y G I LAR F+ + SWN++IA
Sbjct: 124 AFDEGRQVHGQVLKTHLWFDPFVGNSMVRMYIDFGEIELARRVFDRMPNRDVVSWNSMIA 183
Query: 362 GFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEIT 421
G+++ G IE A+++F M +DV +W++MIS Y QN P AL+LF M+ G++P+
Sbjct: 184 GYLKAGEIELAKKVFETMSDKDVVTWTSMISAYVQNRCPMKALDLFREMLSLGLRPDGPA 243
Query: 422 MVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDN-LSAAIIDMYAKCGSINTAFEVFYHI 480
+VSV AIA G ++EG+W H YV N I L+ + +A+IDMY+KCG I A+ VF I
Sbjct: 244 IVSVLSAIADLGFVEEGKWLHAYVSMNKIELSSGFIGSALIDMYSKCGYIENAYHVFRSI 303
Query: 481 RDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDL 540
R ++ WN++I GLA+HG A L I+ ++E+ +I+ N ITF+G+LSTC H GLV+
Sbjct: 304 SHRR-NIGDWNSMISGLAIHGLAREALDIFVEMERMDIEPNEITFLGLLSTCSHGGLVEE 362
Query: 541 GERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAAS 600
G+ YF+SM Y + P ++HYGCM+DL GRAG+LEDA VI++MP +AD++ W +L+AS
Sbjct: 363 GQFYFESMHEKYKIVPRIQHYGCMIDLFGRAGRLEDALGVIQNMPFEADLLAWKAILSAS 422
Query: 601 RIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPG 660
HG++E+G+ AA L P S VLLSNIYA AGRW+D IR MR G+K++ G
Sbjct: 423 MKHGHIEIGKSAALRAIELAPDDSSSYVLLSNIYAKAGRWDDVAKIRLMMRQRGVKKIAG 482
Query: 661 FSGVV 665
S ++
Sbjct: 483 CSSML 487
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 122/484 (25%), Positives = 215/484 (44%), Gaps = 74/484 (15%)
Query: 26 LVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLI---NLYAKCGLISQAKSMFD 82
+VS L C + + + +QIH+ + K+ L ++ F + LI +L G + A S+F
Sbjct: 9 VVSVLDKCKS---LCELRQIHAQMIKTNLLNHQFTVSRLIAFCSLSGVSGGLDYASSVFS 65
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+ +I G+ +D N + + C++Y+S +
Sbjct: 66 RIQHPNSFIFFALIKGF--SDTSNPVESLILYARMLSCLNYSSGV--------------- 108
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIK--LMIDGFVIISTNLLNMY 200
E ++ SV+ + L E R +HG V+K L D FV +++ MY
Sbjct: 109 ------------EFSIPSVLKACGKLLAFDEGRQVHGQVLKTHLWFDPFV--GNSMVRMY 154
Query: 201 CVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMID 260
+ AR +FD M R++VSWN M+ G+ KAG +ELA+++FE + KDVV+W +MI
Sbjct: 155 IDFGEIELARRVFDRMPNRDVVSWNSMIAGYLKAGEIELAKKVFETMSDKDVVTWTSMIS 214
Query: 261 GYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDC 320
Y+Q +AL ++R ML G+ P+ IV ++SA EG +H+ + +
Sbjct: 215 AYVQNRCPMKALDLFREMLSLGLRPDGPAIVSVLSAIADLGFVEEGKWLHAYVSMNKIEL 274
Query: 321 YD-FIQATIIHFYAACGRINLARLQFE-LGIKDHIASWNALIAGFIRNGMIEDARQLFNN 378
FI + +I Y+ CG I A F + + +I WN++I+G +G+ +A +F
Sbjct: 275 SSGFIGSALIDMYSKCGYIENAYHVFRSISHRRNIGDWNSMISGLAIHGLAREALDIFVE 334
Query: 379 MQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG 438
M++ D ++PNEIT + + + G ++EG
Sbjct: 335 MERMD-------------------------------IEPNEITFLGLLSTCSHGGLVEEG 363
Query: 439 RWAHEYVLNN-SITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGL 497
++ E + I +ID++ + G + A V ++ ++ W AI+
Sbjct: 364 QFYFESMHEKYKIVPRIQHYGCMIDLFGRAGRLEDALGVIQNMPFEADLLA-WKAILSAS 422
Query: 498 AMHG 501
HG
Sbjct: 423 MKHG 426
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 119/433 (27%), Positives = 197/433 (45%), Gaps = 86/433 (19%)
Query: 19 NSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAK 78
+S E ++ S L+ C +A +G+Q+H + K+ L + F+ NS++ +Y G I A+
Sbjct: 105 SSGVEFSIPSVLKACGKLLAFDEGRQVHGQVLKTHLWFDPFVGNSMVRMYIDFGEIELAR 164
Query: 79 SMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWRE 138
+FD D V+ N MI+GY++ + A++VF+ K V++TSMI + QN C +
Sbjct: 165 RVFDRMPNRDVVSWNSMIAGYLKAGEIELAKKVFETMSDKDVVTWTSMISAYVQNRCPMK 224
Query: 139 ALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMID---GFVIISTN 195
AL++FR+M LG+ P+ + SV+S+ LG + E + LH V I+ GF I +
Sbjct: 225 ALDLFREMLSLGLRPDGPAIVSVLSAIADLGFVEEGKWLHAYVSMNKIELSSGF--IGSA 282
Query: 196 LLNMYCVCSSLVEARSLFDEMKE-RNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVS 254
L++MY C + A +F + RNI WN M++G A G LARE
Sbjct: 283 LIDMYSKCGYIENAYHVFRSISHRRNIGDWNSMISGLAIHG---LARE------------ 327
Query: 255 WGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIV 314
+D ++++ER+ I PN++ + L+S C H +V
Sbjct: 328 ---ALDIFVEMERMD-------------IEPNEITFLGLLSTCS-----------HGGLV 360
Query: 315 KAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQ 374
+ G FY + + I I + +I F R G +EDA
Sbjct: 361 EEG------------QFY-------FESMHEKYKIVPRIQHYGCMIDLFGRAGRLEDALG 401
Query: 375 LFNNMQ-KRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSG 433
+ NM + D+ +W A++S + HG ++ G K + + + +SS
Sbjct: 402 VIQNMPFEADLLAWKAILSASMK-----------HGHIEIG-KSAALRAIELAPDDSSSY 449
Query: 434 TL------KEGRW 440
L K GRW
Sbjct: 450 VLLSNIYAKAGRW 462
>gi|449435966|ref|XP_004135765.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 352 bits (904), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 185/455 (40%), Positives = 260/455 (57%), Gaps = 33/455 (7%)
Query: 238 ELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISAC 297
+ A ++F IP+ +V W +I G L+ +L +A+ Y M+ D PN L AC
Sbjct: 84 DFALKVFSSIPNPNVFIWNIVIKGCLENNKLFKAIYFYGRMVIDA-RPNKFTYPTLFKAC 142
Query: 298 GRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKD------ 351
A A EG QIH +VK G I++ IH YA+ GR+ AR F G D
Sbjct: 143 SVAQAVQEGRQIHGHVVKHGIGSDVHIKSAGIHMYASFGRLEDARKMFYSGESDVVCWNT 202
Query: 352 ------------------------HIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSW 387
+I SWN +I G + G + DAR+LF+ M +RD SW
Sbjct: 203 MIDGYLKCGVLEAAKGLFAQMPVKNIGSWNVMINGLAKGGNLGDARKLFDEMSERDEISW 262
Query: 388 SAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLN 447
S+M+ GY + ALE+F M +P + SV A ++ G + +GRW H Y+
Sbjct: 263 SSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKR 322
Query: 448 NSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTL 507
NSI L+ L A++DMYAKCG ++ +EVF +++R + WNA+I GLA+HG A L
Sbjct: 323 NSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKER--EIFTWNAMIGGLAIHGRAEDAL 380
Query: 508 KIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDL 567
+++S L++ +K N IT +GVL+ C HAG VD G R F++M+ Y V+P+L+HYGCMVDL
Sbjct: 381 ELFSKLQEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTMREFYGVDPELEHYGCMVDL 440
Query: 568 LGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSR 627
LGR+G +AE++I SMPMK + +WG LL A RIHGN ++ ER K L L+P +
Sbjct: 441 LGRSGLFSEAEDLINSMPMKPNAAVWGALLGACRIHGNFDLAERVGKILLELEPQNSGRY 500
Query: 628 VLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
VLLSNIYA GR++D IRK M+D G+K +PG S
Sbjct: 501 VLLSNIYAKVGRFDDVSKIRKLMKDRGIKTVPGVS 535
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 125/526 (23%), Positives = 231/526 (43%), Gaps = 56/526 (10%)
Query: 6 FHSVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLI 65
F V S + N+ S V L + ++ Q+H L+ +SG + ++ +L+
Sbjct: 13 FKPVDFSAEKNIPTSKLPQKTVLKLFDSKSITSLQYLTQLHGLVLRSGHFQDHYVSGALL 72
Query: 66 NLYAKCGL--ISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDA-----REVFDKTPIK 118
YA A +F S + NI+I G + N++L A R V D P K
Sbjct: 73 KCYANPHFSNFDFALKVFSSIPNPNVFIWNIVIKGCLENNKLFKAIYFYGRMVIDARPNK 132
Query: 119 CCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLH 178
+Y ++ + +E ++ + G+ + ++ I G + + R
Sbjct: 133 --FTYPTLFKACSVAQAVQEGRQIHGHVVKHGIGSDVHIKSAGIHMYASFGRLEDAR--- 187
Query: 179 GLVIKLMIDGF--VIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGL 236
K+ G V+ +++ Y C L A+ LF +M +NI SWNVM+NG AK G
Sbjct: 188 ----KMFYSGESDVVCWNTMIDGYLKCGVLEAAKGLFAQMPVKNIGSWNVMINGLAKGGN 243
Query: 237 VELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISA 296
+ AR+LF+ + +D +SW +M+DGY+ R EAL +++ M + P ++ +++A
Sbjct: 244 LGDARKLFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLAA 303
Query: 297 CGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASW 356
C A +G +H+ + + + ++ YA CGR+++ FE + I +W
Sbjct: 304 CSNIGAIDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFTW 363
Query: 357 NALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVK 416
NA+I G +G EDA +LF+ +Q + +K
Sbjct: 364 NAMIGGLAIHGRAEDALELFSKLQ-------------------------------EGRMK 392
Query: 417 PNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLS--AAIIDMYAKCGSINTAF 474
PN IT+V V A A +G + +G + + ++ L ++D+ + G + A
Sbjct: 393 PNGITLVGVLTACAHAGFVDKGLRIFQ-TMREFYGVDPELEHYGCMVDLLGRSGLFSEAE 451
Query: 475 EVFYHIRDRTTSVSPWNAIICGLAMHGDANLTL---KIYSDLEKRN 517
++ + + + + W A++ +HG+ +L KI +LE +N
Sbjct: 452 DLINSMPMKPNA-AVWGALLGACRIHGNFDLAERVGKILLELEPQN 496
>gi|297727555|ref|NP_001176141.1| Os10g0400250 [Oryza sativa Japonica Group]
gi|13940614|gb|AAK50416.1|AC021891_17 Putative selenium-binding protein-like [Oryza sativa Japonica
Group]
gi|31431939|gb|AAP53645.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125574711|gb|EAZ15995.1| hypothetical protein OsJ_31439 [Oryza sativa Japonica Group]
gi|255679385|dbj|BAH94869.1| Os10g0400250 [Oryza sativa Japonica Group]
Length = 651
Score = 352 bits (903), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 169/430 (39%), Positives = 266/430 (61%), Gaps = 4/430 (0%)
Query: 235 GLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDG--IAPNDVMIVD 292
G +E AR LF+R P +D+VSW T+I GY++ +EAL ++ M+ + + P++V ++
Sbjct: 174 GPMEDARRLFDRSPVRDLVSWNTLIGGYVRRGNPAEALELFWRMVAEDAVVRPDEVTMIA 233
Query: 293 LISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDH 352
+S CG+ G ++H + G C + ++ Y CG + +A+ FE
Sbjct: 234 AVSGCGQMRDLELGRRLHGFVDSDGVSCTVRLMNALMDMYIKCGSLEMAKSVFERIEHRT 293
Query: 353 IASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVD 412
+ SW +I GF + G+++DAR++F+ M +RDV+ W+A+++GY Q +Q AL LFH M +
Sbjct: 294 VVSWTTMIVGFAKFGLMDDARKVFDEMPERDVFPWNALMTGYVQCKQCKEALSLFHEMQE 353
Query: 413 AGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINT 472
A V P+EITMV++ A + G L+ G W H Y+ + + + L ++IDMYAKCG+I
Sbjct: 354 ASVVPDEITMVNLLTACSQLGALEMGMWVHRYIEKHRLVFSVALGTSLIDMYAKCGNIEK 413
Query: 473 AFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTC 532
A +F I ++ W A+ICGLA HG AN ++ + + + K + ITFIGVLS C
Sbjct: 414 AIHIFKEIPEKNALT--WTAMICGLANHGHANEAIEHFRTMIELGQKPDEITFIGVLSAC 471
Query: 533 CHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVI 592
CHAGLV G +F M++ Y++E +KHY CM+DLLGRAG L++AE+++ +MPM+ D V+
Sbjct: 472 CHAGLVKEGREFFSLMETKYHLERKMKHYSCMIDLLGRAGHLDEAEQLVNTMPMEPDAVV 531
Query: 593 WGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRD 652
WG + A R+ GN+ +GE+AA L + PS VLL+N+YA+A + A +R MR
Sbjct: 532 WGAIFFACRMQGNISLGEKAAMKLVEIDPSDSGIYVLLANMYAEANMRKKADKVRAMMRH 591
Query: 653 CGMKRLPGFS 662
G++++PG S
Sbjct: 592 LGVEKVPGCS 601
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 118/410 (28%), Positives = 208/410 (50%), Gaps = 41/410 (10%)
Query: 105 LNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVI--PNEVTLASVI 162
+ DAR +FD++P++ VS+ ++I G+ + EALE+F M + P+EVT+ + +
Sbjct: 176 MEDARRLFDRSPVRDLVSWNTLIGGYVRRGNPAEALELFWRMVAEDAVVRPDEVTMIAAV 235
Query: 163 SSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIV 222
S + + R LHG V + V + L++MY C SL A+S+F+ ++ R +V
Sbjct: 236 SGCGQMRDLELGRRLHGFVDSDGVSCTVRLMNALMDMYIKCGSLEMAKSVFERIEHRTVV 295
Query: 223 SWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDG 282
SW M+ GFAK GL++ AR++F+ +P +DV W ++ GY+Q ++ EAL+++ M
Sbjct: 296 SWTTMIVGFAKFGLMDDARKVFDEMPERDVFPWNALMTGYVQCKQCKEALSLFHEMQEAS 355
Query: 283 IAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLAR 342
+ P+++ +V+L++AC + A G+ +H I K + ++I YA CG I
Sbjct: 356 VVPDEITMVNLLTACSQLGALEMGMWVHRYIEKHRLVFSVALGTSLIDMYAKCGNI---- 411
Query: 343 LQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNM 402
E A +F + +++ +W+AMI G A + N
Sbjct: 412 ---------------------------EKAIHIFKEIPEKNALTWTAMICGLANHGHANE 444
Query: 403 ALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEY--VLNNSITLNDNLS--A 458
A+E F M++ G KP+EIT + V A +G +KEGR E+ ++ L + +
Sbjct: 445 AIEHFRTMIELGQKPDEITFIGVLSACCHAGLVKEGR---EFFSLMETKYHLERKMKHYS 501
Query: 459 AIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLK 508
+ID+ + G ++ A ++ + +V W AI M G+ +L K
Sbjct: 502 CMIDLLGRAGHLDEAEQLVNTMPMEPDAVV-WGAIFFACRMQGNISLGEK 550
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 88/383 (22%), Positives = 179/383 (46%), Gaps = 64/383 (16%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E+ +++A+ C + G+++H + G+ + N+L+++Y KCG + AKS+F+
Sbjct: 228 EVTMIAAVSGCGQMRDLELGRRLHGFVDSDGVSCTVRLMNALMDMYIKCGSLEMAKSVFE 287
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
V+ MI G+ + ++DAR+VFD+ P + + +++ G+ Q +EAL +
Sbjct: 288 RIEHRTVVSWTTMIVGFAKFGLMDDARKVFDEMPERDVFPWNALMTGYVQCKQCKEALSL 347
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
F +M+ V+P+E+T+ +++++ LG + +H + K + V + T+L++MY
Sbjct: 348 FHEMQEASVVPDEITMVNLLTACSQLGALEMGMWVHRYIEKHRLVFSVALGTSLIDMYAK 407
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
C ++ +A +F E+ E+N ++W M+ G A G
Sbjct: 408 CGNIEKAIHIFKEIPEKNALTWTAMICGLANHG--------------------------- 440
Query: 263 LQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD 322
+EA+ +R M+ G P+++ + ++SAC H+ +VK G + +
Sbjct: 441 ----HANEAIEHFRTMIELGQKPDEITFIGVLSAC-----------CHAGLVKEGREFFS 485
Query: 323 FIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ-K 381
++ + E +K ++ +I R G +++A QL N M +
Sbjct: 486 LME---------------TKYHLERKMK----HYSCMIDLLGRAGHLDEAEQLVNTMPME 526
Query: 382 RDVYSWSAMISGYAQNEQPNMAL 404
D W A+ +A Q N++L
Sbjct: 527 PDAVVWGAIF--FACRMQGNISL 547
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 92/369 (24%), Positives = 157/369 (42%), Gaps = 71/369 (19%)
Query: 272 LTMYRAMLCDGIA-PNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIH 330
L +YRA+L G A P+ + L+ AC R +G G + +++ G D F+ H
Sbjct: 109 LPLYRALLRSGTARPDHLTFPFLLKACARLREWGYGDAALAHVLRLGLDSDVFVVNAATH 168
Query: 331 FYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAM 390
F + G + AR F+ + SWN LI G++R G
Sbjct: 169 FLSIRGPMEDARRLFDRSPVRDLVSWNTLIGGYVRRG----------------------- 205
Query: 391 ISGYAQNEQPNMALELFHGMV--DAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNN 448
P ALELF MV DA V+P+E+TM++ L+ GR H +V ++
Sbjct: 206 --------NPAEALELFWRMVAEDAVVRPDEVTMIAAVSGCGQMRDLELGRRLHGFVDSD 257
Query: 449 SITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTT----------------------- 485
++ L A++DMY KCGS+ A VF I RT
Sbjct: 258 GVSCTVRLMNALMDMYIKCGSLEMAKSVFERIEHRTVVSWTTMIVGFAKFGLMDDARKVF 317
Query: 486 ------SVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVD 539
V PWNA++ G L ++ ++++ ++ + IT + +L+ C G ++
Sbjct: 318 DEMPERDVFPWNALMTGYVQCKQCKEALSLFHEMQEASVVPDEITMVNLLTACSQLGALE 377
Query: 540 LG---ERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTL 596
+G RY + + V++V ++D+ + G +E A + + +P K + + W +
Sbjct: 378 MGMWVHRYIEKHRLVFSVALGTS----LIDMYAKCGNIEKAIHIFKEIPEK-NALTWTAM 432
Query: 597 LAASRIHGN 605
+ HG+
Sbjct: 433 ICGLANHGH 441
>gi|225456890|ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Vitis vinifera]
Length = 698
Score = 352 bits (903), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 193/586 (32%), Positives = 305/586 (52%), Gaps = 77/586 (13%)
Query: 77 AKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCW 136
A+++ +S + L P + + +S + + D + +Y MI GF
Sbjct: 59 AENLLESAAILLPTSMDYAVSIFRQIDEPDSP-------------AYNIMIRGFTLKQSP 105
Query: 137 REALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNL 196
EA+ +F++M V P+E T ++ L + E +H L++K + L
Sbjct: 106 HEAILLFKEMHENSVQPDEFTFPCILKVCSRLQALSEGEQIHALIMKCGFGSHGFVKNTL 165
Query: 197 LNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWG 256
++MY C G VE+AR +F+ + ++V +W
Sbjct: 166 IHMYANC-------------------------------GEVEVARRVFDEMSERNVRTWN 194
Query: 257 TMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKA 316
+M GY + E + ++ ML I ++V +V +++ACGR G I+ + +
Sbjct: 195 SMFAGYTKSGNWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELGEWINRYVEEK 254
Query: 317 GFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLF 376
G + +++ YA CG+++ AR+LF
Sbjct: 255 GLKGNPTLITSLVDMYAKCGQVD-------------------------------TARRLF 283
Query: 377 NNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLK 436
+ M +RDV +WSAMISGY+Q + AL+LFH M A + PNEITMVS+ + A G L+
Sbjct: 284 DQMDRRDVVAWSAMISGYSQASRCREALDLFHEMQKANIDPNEITMVSILSSCAVLGALE 343
Query: 437 EGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICG 496
G+W H ++ + L L A++D YAKCGS+ ++ EVF + +V W +I G
Sbjct: 344 TGKWVHFFIKKKRMKLTVTLGTALMDFYAKCGSVESSIEVFGKMP--VKNVLSWTVLIQG 401
Query: 497 LAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEP 556
LA +G L+ + + ++N++ N +TFIGVLS C HAGLVD G F SM + +EP
Sbjct: 402 LASNGQGKKALEYFYLMLEKNVEPNDVTFIGVLSACSHAGLVDEGRDLFVSMSRDFGIEP 461
Query: 557 DLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSL 616
++HYGCMVD+LGRAG +E+A + I++MP++ + VIW TLLA+ ++H NVE+GE + K L
Sbjct: 462 RIEHYGCMVDILGRAGLIEEAFQFIKNMPIQPNAVIWRTLLASCKVHKNVEIGEESLKQL 521
Query: 617 AGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
L+P+H +LLSNIYA GRWEDA +R EM++ G+K+ PG S
Sbjct: 522 IILEPTHSGDYILLSNIYASVGRWEDALKVRGEMKEKGIKKTPGCS 567
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 121/502 (24%), Positives = 214/502 (42%), Gaps = 104/502 (20%)
Query: 9 VFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLY 68
+F N D E L+ CS A+S+G+QIH+LI K G S+ F++N+LI++Y
Sbjct: 111 LFKEMHENSVQPD-EFTFPCILKVCSRLQALSEGEQIHALIMKCGFGSHGFVKNTLIHMY 169
Query: 69 AKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIM 128
A CG + A+ +FD S RN R ++ SM
Sbjct: 170 ANCGEVEVARRVFDEMSE--------------RNVR-----------------TWNSMFA 198
Query: 129 GFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDG 188
G+ ++ W E +++F +M L + +EVTL SV+++ L + ++ V + + G
Sbjct: 199 GYTKSGNWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELGEWINRYVEEKGLKG 258
Query: 189 FVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIP 248
+ T+L++MY C + AR LFD+M R++V+W+ M++G+++A
Sbjct: 259 NPTLITSLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQAS------------- 305
Query: 249 SKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQ 308
R EAL ++ M I PN++ +V ++S+C A G
Sbjct: 306 ------------------RCREALDLFHEMQKANIDPNEITMVSILSSCAVLGALETGKW 347
Query: 309 IHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGM 368
+H I K + ++ FYA CG + + F ++ SW LI G NG
Sbjct: 348 VHFFIKKKRMKLTVTLGTALMDFYAKCGSVESSIEVFGKMPVKNVLSWTVLIQGLASNG- 406
Query: 369 IEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCA 428
Q ALE F+ M++ V+PN++T + V A
Sbjct: 407 ------------------------------QGKKALEYFYLMLEKNVEPNDVTFIGVLSA 436
Query: 429 IASSGTLKEGR-----WAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDR 483
+ +G + EGR + ++ + I ++D+ + G I AF+ ++ +
Sbjct: 437 CSHAGLVDEGRDLFVSMSRDFGIEPRI----EHYGCMVDILGRAGLIEEAFQFIKNMPIQ 492
Query: 484 TTSVSPWNAIICGLAMHGDANL 505
+V W ++ +H + +
Sbjct: 493 PNAVI-WRTLLASCKVHKNVEI 513
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 110/258 (42%), Gaps = 67/258 (25%)
Query: 3 LDHFHSVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQN 62
LD FH + QKAN+ + E+ +VS L C+ A+ G+ +H I K ++ +
Sbjct: 311 LDLFHEM---QKANIDPN--EITMVSILSSCAVLGALETGKWVHFFIKKKRMKLTVTLGT 365
Query: 63 SLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVS 122
+L++ YAKCG + + EVF K P+K +S
Sbjct: 366 ALMDFYAKCGSVESSI-------------------------------EVFGKMPVKNVLS 394
Query: 123 YTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVI 182
+T +I G A N ++ALE F M V PN+VT V+S+ H G + E R
Sbjct: 395 WTVLIQGLASNGQGKKALEYFYLMLEKNVEPNDVTFIGVLSACSHAGLVDEGR------- 447
Query: 183 KLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARE 242
D FV +S + +E R I + M++ +AGL+E A +
Sbjct: 448 ----DLFVSMSRDF---------GIEPR----------IEHYGCMVDILGRAGLIEEAFQ 484
Query: 243 LFERIP-SKDVVSWGTMI 259
+ +P + V W T++
Sbjct: 485 FIKNMPIQPNAVIWRTLL 502
>gi|310656753|gb|ADP02188.1| PPR domain-containing protein [Triticum aestivum]
Length = 788
Score = 351 bits (901), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 201/610 (32%), Positives = 329/610 (53%), Gaps = 4/610 (0%)
Query: 56 SNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKT 115
++ F + +++ + K G I+ A+ +FD V+ M+ ++ R+ +A E++++
Sbjct: 147 ASPFAYDFMVSEHVKAGDIASARRLFDGMPDRTVVSYTTMVDALMKRGRVAEAVELYEQC 206
Query: 116 PIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECR 175
P +T+ I GF +N+ AL VFR M V PN +T+ +I + V G
Sbjct: 207 PSGSVAFFTATISGFVRNELHHNALGVFRKMLSCRVRPNGITIVCMIKACVGAGEFGLAL 266
Query: 176 MLHGLVIKL-MIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKA 234
+ GL IK + + + +L+ +Y AR +FDEM +++VSW +L+ ++++
Sbjct: 267 SIVGLAIKSNFFESSIEVQNSLITLYLRMGDAAAARKVFDEMDVKDVVSWTALLDVYSES 326
Query: 235 GLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLI 294
G ++ AR + + +P ++ VSWGT+I + Q +EA+ +Y ML DG PN ++
Sbjct: 327 GDLDGARRVLDAMPERNEVSWGTLIARHEQRGNAAEAVKLYSQMLADGCRPNISCFSSVL 386
Query: 295 SACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIA 354
SAC G +IH+ +K G F+ ++I Y C + A+ F+ + +I
Sbjct: 387 SACASLEDLRGGARIHARSLKMGSSTNVFVSCSLIDMYCKCNKCGDAQTIFDTLPQKNIV 446
Query: 355 SWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAG 414
WN+L++G+ NG + +A LF M R++ SW+ +ISGYAQN Q AL+ F+ M+ +G
Sbjct: 447 CWNSLVSGYSYNGKMVEAMYLFKKMPARNLASWNTIISGYAQNRQFVDALKSFNAMLASG 506
Query: 415 VKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAF 474
P EIT SV A A+ +L G+ AH + I + + A+ DMYAK G + ++
Sbjct: 507 QVPGEITFSSVLLACANLCSLVTGKMAHAKTIKLGIEESIFIGTALSDMYAKSGDLQSSK 566
Query: 475 EVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCH 534
+FY + +R W A+I GLA +G A ++ ++ D+ + N TF+ +L C H
Sbjct: 567 RMFYQMPERNDVT--WTAMIQGLAENGFAEESILLFEDMMATGMTPNEHTFLALLFACSH 624
Query: 535 AGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWG 594
GLV+ YF M+++ + P KHY CMVD+L RAG+L +AE ++ P K++ W
Sbjct: 625 GGLVEQAIHYFDKMQAL-GISPKEKHYTCMVDVLARAGRLAEAEALLMKTPSKSEANSWA 683
Query: 595 TLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCG 654
LL+A + N E+ ERAAK L L + VLLSN+YA GRW+DA IR M+
Sbjct: 684 ALLSACNTYRNEEIAERAAKRLHELAKDNTAGYVLLSNMYASCGRWKDAARIRVLMKGTT 743
Query: 655 MKRLPGFSGV 664
+K+ G S V
Sbjct: 744 LKKDGGCSWV 753
Score = 178 bits (451), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 110/401 (27%), Positives = 197/401 (49%), Gaps = 8/401 (1%)
Query: 42 GQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIR 101
G I S F+S +E +QNSLI LY + G + A+ +FD D V+ ++ Y
Sbjct: 270 GLAIKSNFFESSIE----VQNSLITLYLRMGDAAAARKVFDEMDVKDVVSWTALLDVYSE 325
Query: 102 NDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASV 161
+ L+ AR V D P + VS+ ++I Q EA++++ M G PN +SV
Sbjct: 326 SGDLDGARRVLDAMPERNEVSWGTLIARHEQRGNAAEAVKLYSQMLADGCRPNISCFSSV 385
Query: 162 ISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNI 221
+S+ L + +H +K+ V +S +L++MYC C+ +A+++FD + ++NI
Sbjct: 386 LSACASLEDLRGGARIHARSLKMGSSTNVFVSCSLIDMYCKCNKCGDAQTIFDTLPQKNI 445
Query: 222 VSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCD 281
V WN +++G++ G + A LF+++P++++ SW T+I GY Q + +AL + AML
Sbjct: 446 VCWNSLVSGYSYNGKMVEAMYLFKKMPARNLASWNTIISGYAQNRQFVDALKSFNAMLAS 505
Query: 282 GIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLA 341
G P ++ ++ AC + G H+ +K G + FI + YA G + +
Sbjct: 506 GQVPGEITFSSVLLACANLCSLVTGKMAHAKTIKLGIEESIFIGTALSDMYAKSGDLQSS 565
Query: 342 RLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDV----YSWSAMISGYAQN 397
+ F + + +W A+I G NG E++ LF +M + +++ A++ +
Sbjct: 566 KRMFYQMPERNDVTWTAMIQGLAENGFAEESILLFEDMMATGMTPNEHTFLALLFACSHG 625
Query: 398 EQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG 438
A+ F M G+ P E + +A +G L E
Sbjct: 626 GLVEQAIHYFDKMQALGISPKEKHYTCMVDVLARAGRLAEA 666
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 111/432 (25%), Positives = 184/432 (42%), Gaps = 72/432 (16%)
Query: 28 SALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTL 87
S L C++ + G +IH+ K G +N F+ SLI++Y KC A+++FD+
Sbjct: 384 SVLSACASLEDLRGGARIHARSLKMGSSTNVFVSCSLIDMYCKCNKCGDAQTIFDTLPQK 443
Query: 88 DPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMR 147
+ V N ++SGY N ++ +A +F K P + S+ ++I G+AQN + +AL+ F M
Sbjct: 444 NIVCWNSLVSGYSYNGKMVEAMYLFKKMPARNLASWNTIISGYAQNRQFVDALKSFNAML 503
Query: 148 ILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLV 207
G +P E+T +SV+ + +L + +M H IKL I+ + I T L +MY L
Sbjct: 504 ASGQVPGEITFSSVLLACANLCSLVTGKMAHAKTIKLGIEESIFIGTALSDMYAKSGDLQ 563
Query: 208 EARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVER 267
++ +F +M ERN V+W M+ G A+ G E
Sbjct: 564 SSKRMFYQMPERNDVTWTAMIQGLAENGFAE----------------------------- 594
Query: 268 LSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQAT 327
E++ ++ M+ G+ PN+ + L+ AC H +V+ +D +QA
Sbjct: 595 --ESILLFEDMMATGMTPNEHTFLALLFACS-----------HGGLVEQAIHYFDKMQA- 640
Query: 328 IIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLF-NNMQKRDVYS 386
LGI + ++ R G + +A L K + S
Sbjct: 641 -------------------LGISPKEKHYTCMVDVLARAGRLAEAEALLMKTPSKSEANS 681
Query: 387 WSAMISG---YAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHE 443
W+A++S Y E A + H + K N V + AS G K+ A
Sbjct: 682 WAALLSACNTYRNEEIAERAAKRLHEL----AKDNTAGYVLLSNMYASCGRWKDA--ARI 735
Query: 444 YVLNNSITLNDN 455
VL TL +
Sbjct: 736 RVLMKGTTLKKD 747
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 118/298 (39%), Gaps = 76/298 (25%)
Query: 10 FNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYA 69
FN+ A+ Q E+ S L C+ ++ G+ H+ K G+E + FI +L ++YA
Sbjct: 499 FNAMLASGQVPG-EITFSSVLLACANLCSLVTGKMAHAKTIKLGIEESIFIGTALSDMYA 557
Query: 70 KCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMG 129
K G + +K MF RND V++T+MI G
Sbjct: 558 KSGDLQSSKRMFYQMPE--------------RND-----------------VTWTAMIQG 586
Query: 130 FAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGF 189
A+N E++ +F DM G+ PNE T +++ + H GG+ E
Sbjct: 587 LAENGFAEESILLFEDMMATGMTPNEHTFLALLFACSH-GGLVE---------------- 629
Query: 190 VIISTNLLNMYCVCSSLVEARSLFDEMKERNIVS----WNVMLNGFAKAGLVELARELFE 245
+A FD+M+ I + M++ A+AG + A L
Sbjct: 630 ------------------QAIHYFDKMQALGISPKEKHYTCMVDVLARAGRLAEAEALLM 671
Query: 246 RIPSK-DVVSWGTMIDG---YLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGR 299
+ PSK + SW ++ Y E A + D A V++ ++ ++CGR
Sbjct: 672 KTPSKSEANSWAALLSACNTYRNEEIAERAAKRLHELAKDNTA-GYVLLSNMYASCGR 728
>gi|326507326|dbj|BAJ95740.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 798
Score = 351 bits (901), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 201/610 (32%), Positives = 329/610 (53%), Gaps = 4/610 (0%)
Query: 56 SNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKT 115
++ F + +++ + K G I+ A+ +FD + V+ M+ ++ R+ +A E++++
Sbjct: 149 ASPFTYDFMVHEHVKAGDIASARGLFDGMPERNVVSYTTMVDALMKRGRVAEAVELYEQC 208
Query: 116 PIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECR 175
P +T+ I GF +N+ AL VFR M GV PN +T +I + V G
Sbjct: 209 PSGSVAFFTATISGFVRNELHHNALGVFRKMVSCGVRPNGITFVCMIKACVGAGEFGLAM 268
Query: 176 MLHGLVIKL-MIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKA 234
+ G IK + + + +L+ +Y AR +FDEM +++VSW +L+ ++++
Sbjct: 269 SIVGSAIKSNFFESSIEVQNSLITLYLRMGDAAAARKVFDEMDVKDVVSWTALLDVYSES 328
Query: 235 GLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLI 294
G ++ AR + + +P ++ VSWGT+I + Q +EA+ +Y ML DG PN ++
Sbjct: 329 GDLDGARRVLDAMPERNEVSWGTLIARHEQRGNAAEAVKLYSQMLADGCRPNISCFSSVL 388
Query: 295 SACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIA 354
SAC G +IH+ +K G F+ +++I Y C + A+ F+ + +I
Sbjct: 389 SACATLEDLRGGARIHARSLKMGSSTNVFVSSSLIDMYCKCKKCRDAQTIFDTLPEKNIV 448
Query: 355 SWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAG 414
WN+L +G+ NG + +A LF M R++ SW+ +ISGYAQN Q AL F+ M+ +G
Sbjct: 449 CWNSLASGYSYNGKMVEAMYLFKKMPARNLASWNTIISGYAQNRQFVDALRSFNAMLASG 508
Query: 415 VKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAF 474
P EIT SV A A+ +L G+ AH + + + + A+ DMYAK G + ++
Sbjct: 509 QVPGEITFSSVLLACANLCSLVTGKMAHAKTIKLGMEESIFIGTALSDMYAKSGDLQSSK 568
Query: 475 EVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCH 534
+FY + +R W A+I GLA +G A ++ + D+ + N TF+ +L C H
Sbjct: 569 RMFYQMPERNDVT--WTAMIQGLAENGFAEESILLLEDMMATGMTPNEHTFLALLFACSH 626
Query: 535 AGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWG 594
GLV+ YF+ M++ + + P KHY CMVD+L RAG+L +AE ++ P K++ W
Sbjct: 627 GGLVEQAIHYFEKMQA-WGISPKEKHYTCMVDVLARAGRLIEAEALLMKTPSKSEANSWA 685
Query: 595 TLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCG 654
LL+A + N E+GERAAK L L + VLLSN+YA GRW+DA IR M+
Sbjct: 686 ALLSACNTYKNEEIGERAAKRLHELGKDNTAGYVLLSNMYASCGRWKDAARIRVLMKGTT 745
Query: 655 MKRLPGFSGV 664
+K+ G S V
Sbjct: 746 LKKDGGCSWV 755
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 110/401 (27%), Positives = 195/401 (48%), Gaps = 8/401 (1%)
Query: 42 GQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIR 101
G I S F+S +E +QNSLI LY + G + A+ +FD D V+ ++ Y
Sbjct: 272 GSAIKSNFFESSIE----VQNSLITLYLRMGDAAAARKVFDEMDVKDVVSWTALLDVYSE 327
Query: 102 NDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASV 161
+ L+ AR V D P + VS+ ++I Q EA++++ M G PN +SV
Sbjct: 328 SGDLDGARRVLDAMPERNEVSWGTLIARHEQRGNAAEAVKLYSQMLADGCRPNISCFSSV 387
Query: 162 ISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNI 221
+S+ L + +H +K+ V +S++L++MYC C +A+++FD + E+NI
Sbjct: 388 LSACATLEDLRGGARIHARSLKMGSSTNVFVSSSLIDMYCKCKKCRDAQTIFDTLPEKNI 447
Query: 222 VSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCD 281
V WN + +G++ G + A LF+++P++++ SW T+I GY Q + +AL + AML
Sbjct: 448 VCWNSLASGYSYNGKMVEAMYLFKKMPARNLASWNTIISGYAQNRQFVDALRSFNAMLAS 507
Query: 282 GIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLA 341
G P ++ ++ AC + G H+ +K G + FI + YA G + +
Sbjct: 508 GQVPGEITFSSVLLACANLCSLVTGKMAHAKTIKLGMEESIFIGTALSDMYAKSGDLQSS 567
Query: 342 RLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDV----YSWSAMISGYAQN 397
+ F + + +W A+I G NG E++ L +M + +++ A++ +
Sbjct: 568 KRMFYQMPERNDVTWTAMIQGLAENGFAEESILLLEDMMATGMTPNEHTFLALLFACSHG 627
Query: 398 EQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG 438
A+ F M G+ P E + +A +G L E
Sbjct: 628 GLVEQAIHYFEKMQAWGISPKEKHYTCMVDVLARAGRLIEA 668
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 88/336 (26%), Positives = 150/336 (44%), Gaps = 32/336 (9%)
Query: 28 SALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTL 87
S L C+ + G +IH+ K G +N F+ +SLI++Y KC A+++FD+
Sbjct: 386 SVLSACATLEDLRGGARIHARSLKMGSSTNVFVSSSLIDMYCKCKKCRDAQTIFDTLPEK 445
Query: 88 DPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMR 147
+ V N + SGY N ++ +A +F K P + S+ ++I G+AQN + +AL F M
Sbjct: 446 NIVCWNSLASGYSYNGKMVEAMYLFKKMPARNLASWNTIISGYAQNRQFVDALRSFNAML 505
Query: 148 ILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLV 207
G +P E+T +SV+ + +L + +M H IKL ++ + I T L +MY L
Sbjct: 506 ASGQVPGEITFSSVLLACANLCSLVTGKMAHAKTIKLGMEESIFIGTALSDMYAKSGDLQ 565
Query: 208 EARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVER 267
++ +F +M ERN V+W M+ G A+ G E
Sbjct: 566 SSKRMFYQMPERNDVTWTAMIQGLAENGFAE----------------------------- 596
Query: 268 LSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQAT 327
E++ + M+ G+ PN+ + L+ AC + + + G +
Sbjct: 597 --ESILLLEDMMATGMTPNEHTFLALLFACSHGGLVEQAIHYFEKMQAWGISPKEKHYTC 654
Query: 328 IIHFYAACGR-INLARLQFELGIKDHIASWNALIAG 362
++ A GR I L + K SW AL++
Sbjct: 655 MVDVLARAGRLIEAEALLMKTPSKSEANSWAALLSA 690
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 116/297 (39%), Gaps = 74/297 (24%)
Query: 10 FNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYA 69
FN+ A+ Q E+ S L C+ ++ G+ H+ K G+E + FI +L ++YA
Sbjct: 501 FNAMLASGQVPG-EITFSSVLLACANLCSLVTGKMAHAKTIKLGMEESIFIGTALSDMYA 559
Query: 70 KCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMG 129
K G + +K MF RND V++T+MI G
Sbjct: 560 KSGDLQSSKRMFYQMPE--------------RND-----------------VTWTAMIQG 588
Query: 130 FAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGF 189
A+N E++ + DM G+ PNE T +++ + H GG+ E
Sbjct: 589 LAENGFAEESILLLEDMMATGMTPNEHTFLALLFACSH-GGLVE---------------- 631
Query: 190 VIISTNLLNMYCVCSSLVEARSLFDEMKERNIVS----WNVMLNGFAKAGLVELARELFE 245
+A F++M+ I + M++ A+AG + A L
Sbjct: 632 ------------------QAIHYFEKMQAWGISPKEKHYTCMVDVLARAGRLIEAEALLM 673
Query: 246 RIPSK-DVVSWGTMIDG--YLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGR 299
+ PSK + SW ++ + E + E L V++ ++ ++CGR
Sbjct: 674 KTPSKSEANSWAALLSACNTYKNEEIGERAAKRLHELGKDNTAGYVLLSNMYASCGR 730
>gi|225432742|ref|XP_002279134.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22690
[Vitis vinifera]
Length = 836
Score = 351 bits (901), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 208/639 (32%), Positives = 327/639 (51%), Gaps = 73/639 (11%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
L C+ A +G Q+H + K GLE + FIQN LI+ YA+CG + +F+ S
Sbjct: 138 LSGCTKIAAFCEGIQVHGSVVKMGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSE--- 194
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
RN VS+TS+I G+A+ D +EA+ +F +M
Sbjct: 195 -----------RN-----------------VVSWTSLICGYARGDRPKEAVSLFFEMVEA 226
Query: 150 GVIPNEVTLASVISSSVHLG----GIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSS 205
G+ P+ VT+ VIS+ L G C + L +KL
Sbjct: 227 GIRPSSVTMVCVISACAKLRDLDMGERVCAYIGELGLKL--------------------- 265
Query: 206 LVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQV 265
N V N +++ + K G ++ A+ LF+ +++V + T++ Y +
Sbjct: 266 --------------NKVMVNALVDMYMKCGAIDAAKRLFDECVDRNLVLYNTILSNYARQ 311
Query: 266 ERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQ 325
EAL + ML G P+ V ++ ISA + + G H +++ G + +D I
Sbjct: 312 GLAREALAILDEMLQQGPRPDRVTMLSAISASAQLVDLFYGKVCHGYVIRNGLEGWDSIG 371
Query: 326 ATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVY 385
II Y CG+ +A F+L + SWN+L AGFIRNG +E A ++FN + +R+
Sbjct: 372 NVIIDMYMKCGKPEMACRVFDLMSNKTVVSWNSLTAGFIRNGDVESAWEVFNQIPERNAV 431
Query: 386 SWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYV 445
W+ MISG Q A+ELF M G+K + +TM+ + A G + +W H Y+
Sbjct: 432 FWNTMISGLVQKSLFEDAIELFREMQGEGIKADRVTMMGIASACGYLGAPELAKWVHTYI 491
Query: 446 LNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANL 505
N I + L+ A++DM+A+CG +A +VF + +R VS W A I +AM G+
Sbjct: 492 EKNGIPCDMRLNTALVDMFARCGDPQSAMQVFNKMTER--DVSAWTAAIGTMAMEGNGEG 549
Query: 506 TLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMV 565
+++ + + +K + + F+ VL+ C H G V+ G F M+ + + P ++HYGCMV
Sbjct: 550 ATGLFNQMLIQGVKPDVVLFVQVLTACSHGGQVEQGLHIFSLMED-HGISPQIEHYGCMV 608
Query: 566 DLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGP 625
DLLGRAG L +A ++I+SMPM+ + V+WG+LLAA R+H NVE+ AA+ + L P
Sbjct: 609 DLLGRAGLLREAFDLIKSMPMEPNDVVWGSLLAACRVHKNVEMATYAAERINELAPQRAG 668
Query: 626 SRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
VLLSNIYA AG+W D +R +R+ G++++PG S V
Sbjct: 669 VHVLLSNIYASAGKWTDVARVRLNLREKGVRKVPGSSSV 707
Score = 186 bits (471), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 132/510 (25%), Positives = 229/510 (44%), Gaps = 67/510 (13%)
Query: 2 PLDHFHSVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQ 61
P + F +A ++ S + +V + C+ + G+++ + I + GL+ N +
Sbjct: 213 PKEAVSLFFEMVEAGIRPSS--VTMVCVISACAKLRDLDMGERVCAYIGELGLKLNKVMV 270
Query: 62 NSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCV 121
N+L+++Y KCG I AK +FD C + V N ++S Y R
Sbjct: 271 NALVDMYMKCGAIDAAKRLFDECVDRNLVLYNTILSNYARQ------------------- 311
Query: 122 SYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLV 181
G A REAL + +M G P+ VT+ S IS+S L ++ ++ HG V
Sbjct: 312 -------GLA-----REALAILDEMLQQGPRPDRVTMLSAISASAQLVDLFYGKVCHGYV 359
Query: 182 IKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELAR 241
I+ ++G+ I +++MY C A +FD M + +VSWN + GF + G VE A
Sbjct: 360 IRNGLEGWDSIGNVIIDMYMKCGKPEMACRVFDLMSNKTVVSWNSLTAGFIRNGDVESAW 419
Query: 242 ELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAM 301
E+F +IP ++ V W TMI G +Q +A+ ++R M +GI + V ++ + SACG
Sbjct: 420 EVFNQIPERNAVFWNTMISGLVQKSLFEDAIELFREMQGEGIKADRVTMMGIASACGYLG 479
Query: 302 AFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIA 361
A +H+ I K G C + ++ +A CG
Sbjct: 480 APELAKWVHTYIEKNGIPCDMRLNTALVDMFARCGD------------------------ 515
Query: 362 GFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEIT 421
+ A Q+FN M +RDV +W+A I A A LF+ M+ GVKP+ +
Sbjct: 516 -------PQSAMQVFNKMTERDVSAWTAAIGTMAMEGNGEGATGLFNQMLIQGVKPDVVL 568
Query: 422 MVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIR 481
V V A + G +++G + ++ I+ ++D+ + G + AF++ +
Sbjct: 569 FVQVLTACSHGGQVEQGLHIFSLMEDHGISPQIEHYGCMVDLLGRAGLLREAFDLIKSMP 628
Query: 482 DRTTSVSPWNAIICGLAMHGDANLTLKIYS 511
V W +++ +H N+ + Y+
Sbjct: 629 MEPNDVV-WGSLLAACRVH--KNVEMATYA 655
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 142/615 (23%), Positives = 253/615 (41%), Gaps = 127/615 (20%)
Query: 26 LVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCS 85
L +LR C ++Q +Q+H I K+GL+ L+N A+ I+ +S+
Sbjct: 28 LNESLRCCKT---LNQLKQLHCQITKNGLDQIPSTLTKLVNAGAE---IASPESL----- 76
Query: 86 TLDPVACNIMISGYIRNDRLNDAREVF--DKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
D A E+F D S+I G++ REA+ ++
Sbjct: 77 -----------------DYARKAFELFKEDVRSDDALFMLNSLIRGYSSAGLGREAILLY 119
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
M +LGV PN T V+S + E +HG V+K+ ++ V I L++ Y C
Sbjct: 120 VRMLVLGVTPNHYTFPFVLSGCTKIAAFCEGIQVHGSVVKMGLEEDVFIQNCLIHFYAEC 179
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYL 263
G ++ ++FE + ++VVSW ++I GY
Sbjct: 180 -------------------------------GHMDHGHKVFEGMSERNVVSWTSLICGYA 208
Query: 264 QVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDF 323
+ +R EA++++ M+ GI P+ V +V +ISAC + G ++ + I + G
Sbjct: 209 RGDRPKEAVSLFFEMVEAGIRPSSVTMVCVISACAKLRDLDMGERVCAYIGELGLKLNKV 268
Query: 324 IQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRD 383
+ ++ Y CG I+ A+ F+ + ++ +N +++ + R G+ AR+
Sbjct: 269 MVNALVDMYMKCGAIDAAKRLFDECVDRNLVLYNTILSNYARQGL---ARE--------- 316
Query: 384 VYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHE 443
AL + M+ G +P+ +TM+S A A L G+ H
Sbjct: 317 -------------------ALAILDEMLQQGPRPDRVTMLSAISASAQLVDLFYGKVCHG 357
Query: 444 YVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDA 503
YV+ N + D++ IIDMY KCG A VF + ++T V WN++ G +GD
Sbjct: 358 YVIRNGLEGWDSIGNVIIDMYMKCGKPEMACRVFDLMSNKT--VVSWNSLTAGFIRNGDV 415
Query: 504 NLTLKIYSDLEKRN-------------------------------IKLNSITFIGVLSTC 532
++++ + +RN IK + +T +G+ S C
Sbjct: 416 ESAWEVFNQIPERNAVFWNTMISGLVQKSLFEDAIELFREMQGEGIKADRVTMMGIASAC 475
Query: 533 CHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVI 592
+ G +L ++ + + D++ +VD+ R G + A +V M + DV
Sbjct: 476 GYLGAPELA-KWVHTYIEKNGIPCDMRLNTALVDMFARCGDPQSAMQVFNKMTER-DVSA 533
Query: 593 WGTLLAASRIHGNVE 607
W + + GN E
Sbjct: 534 WTAAIGTMAMEGNGE 548
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 124/429 (28%), Positives = 200/429 (46%), Gaps = 60/429 (13%)
Query: 240 ARELF-ERIPSKDVV-SWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISAC 297
A ELF E + S D + ++I GY EA+ +Y ML G+ PN ++S C
Sbjct: 82 AFELFKEDVRSDDALFMLNSLIRGYSSAGLGREAILLYVRMLVLGVTPNHYTFPFVLSGC 141
Query: 298 GRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWN 357
+ AF EG+Q+H +VK G + FIQ +IHFYA CG + DH
Sbjct: 142 TKIAAFCEGIQVHGSVVKMGLEEDVFIQNCLIHFYAECGHM------------DH----- 184
Query: 358 ALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKP 417
++F M +R+V SW+++I GYA+ ++P A+ LF MV+AG++P
Sbjct: 185 --------------GHKVFEGMSERNVVSWTSLICGYARGDRPKEAVSLFFEMVEAGIRP 230
Query: 418 NEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVF 477
+ +TMV V A A L G Y+ + LN + A++DMY KCG+I+ A +F
Sbjct: 231 SSVTMVCVISACAKLRDLDMGERVCAYIGELGLKLNKVMVNALVDMYMKCGAIDAAKRLF 290
Query: 478 YHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGL 537
DR + +N I+ A G A L I ++ ++ + + +T + +S A L
Sbjct: 291 DECVDRNLVL--YNTILSNYARQGLAREALAILDEMLQQGPRPDRVTMLSAISA--SAQL 346
Query: 538 VDLGERYFKSMKSVYNVEPDLKHY----GCMVDLLGRAGQLEDAEEVIRSMPMKADVVIW 593
VDL ++ + Y + L+ + ++D+ + G+ E A V M K VV W
Sbjct: 347 VDL---FYGKVCHGYVIRNGLEGWDSIGNVIIDMYMKCGKPEMACRVFDLMSNKT-VVSW 402
Query: 594 GTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSR------VLLSNIYADAGRWEDAFSIR 647
+L A +G+VE + P R ++S + + +EDA +
Sbjct: 403 NSLTAGFIRNGDVESAWEVFNQI--------PERNAVFWNTMISGLVQKS-LFEDAIELF 453
Query: 648 KEMRDCGMK 656
+EM+ G+K
Sbjct: 454 REMQGEGIK 462
>gi|357483943|ref|XP_003612258.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513593|gb|AES95216.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 907
Score = 351 bits (901), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 212/623 (34%), Positives = 339/623 (54%), Gaps = 20/623 (3%)
Query: 43 QQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSC-STLDPVACNIMISGYIR 101
++ H L F E + F +I Y + G++ +A+ +F+ LD N MI+GY +
Sbjct: 96 EEAHKL-FDLMAERDNFSWALMITCYTRKGMLEKARELFELVPDKLDTACWNAMIAGYAK 154
Query: 102 NDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASV 161
R +DA +VF+K P+K VSY SM+ G+ QN A++ F M V+ + +A
Sbjct: 155 KGRFDDAEKVFEKMPVKDLVSYNSMLAGYTQNGKMGLAMKFFERMAERNVVSWNLMVAGF 214
Query: 162 ISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNI 221
+++ LG WE + + + D + +L + +VEAR LFD M +N+
Sbjct: 215 VNN-CDLGSAWE-------LFEKIPDPNAVSWVTMLCGFARHGKIVEARKLFDRMPCKNV 266
Query: 222 VSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCD 281
VSWN M+ + + ++ A +LF+ P KD VSW TMI+GY++V +L EA +Y M
Sbjct: 267 VSWNAMIAAYVQDLQIDEAVKLFKETPYKDCVSWTTMINGYVRVGKLDEAREVYNQMPYK 326
Query: 282 GIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLA 341
+A ++ LI GR E Q+ S + K C++ ++I Y GR++ A
Sbjct: 327 DVAAKTALMSGLIQN-GR---IDEASQVFSQLNKRDAICWN----SMIAGYCQSGRMSEA 378
Query: 342 RLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPN 401
F + SWN +I+G+ + G ++ A ++F M R+V SW+++I+G+ QN
Sbjct: 379 LNLFRQMPVKNAVSWNTMISGYAQAGEMDRATEIFEAMGVRNVISWNSLITGFLQNGLYL 438
Query: 402 MALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAII 461
AL+ M G KP++ T + A+ L+ G+ HE +L + + +S A+I
Sbjct: 439 DALKSLVLMGQEGKKPDQSTFACSLSSCANLAALQVGKQLHELILKSGYINDLFVSNALI 498
Query: 462 DMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLN 521
MYAKCG + +A +VF I + WN++I G A++G AN + + +
Sbjct: 499 AMYAKCGGVQSAEKVFKDIEG--VDLISWNSLISGYALNGYANEAFWAFEQMSSEGTVPD 556
Query: 522 SITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVI 581
+TFIG+LS C HAGL + G FK M + +EP +HY C+VDLLGR G+LE+A ++
Sbjct: 557 EVTFIGMLSACSHAGLTNQGVDLFKCMIEGFAIEPLAEHYSCLVDLLGRMGRLEEAFNIV 616
Query: 582 RSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWE 641
R M +KA+ +WG+LLAA R+H N+E+G+ AA L L+P + + + LSN++A+AGRWE
Sbjct: 617 RGMKVKANAGLWGSLLAACRVHKNMELGKIAALRLLELEPHNASNYITLSNMHAEAGRWE 676
Query: 642 DAFSIRKEMRDCGMKRLPGFSGV 664
D +R MR+ +LPG S +
Sbjct: 677 DVERLRVLMRERRAGKLPGCSWI 699
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 105/420 (25%), Positives = 192/420 (45%), Gaps = 83/420 (19%)
Query: 208 EARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVER 267
+AR LFD+M +RN+VSWN M+ G+ +VE A +LF+ + +D SW MI Y +
Sbjct: 66 DARQLFDKMSQRNLVSWNTMIAGYLHNNMVEEAHKLFDLMAERDNFSWALMITCYTRKGM 125
Query: 268 LSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQAT 327
L +A ++ + P+ L +AC AM G
Sbjct: 126 LEKARELFE------LVPD-----KLDTACWNAMIAG----------------------- 151
Query: 328 IIHFYAACGRINLARLQFE-LGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYS 386
YA GR + A FE + +KD + S+N+++AG+ +NG + A + F M +R+V S
Sbjct: 152 ----YAKKGRFDDAEKVFEKMPVKD-LVSYNSMLAGYTQNGKMGLAMKFFERMAERNVVS 206
Query: 387 WSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYV- 445
W+ M++G+ N A ELF + D PN ++ V++ C A G + E R + +
Sbjct: 207 WNLMVAGFVNNCDLGSAWELFEKIPD----PNAVSWVTMLCGFARHGKIVEARKLFDRMP 262
Query: 446 LNNSITLNDNLSAAIIDM--------------------------YAKCGSINTAFEVFYH 479
N ++ N ++A + D+ Y + G ++ A EV+
Sbjct: 263 CKNVVSWNAMIAAYVQDLQIDEAVKLFKETPYKDCVSWTTMINGYVRVGKLDEAREVYNQ 322
Query: 480 IRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVD 539
+ + V+ A++ GL +G + +++S L KR ++I + +++ C +G +
Sbjct: 323 MPYK--DVAAKTALMSGLIQNGRIDEASQVFSQLNKR----DAICWNSMIAGYCQSGRMS 376
Query: 540 LGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAA 599
F+ M V + M+ +AG+++ A E+ +M ++ +V+ W +L+
Sbjct: 377 EALNLFRQMPVKNAVS-----WNTMISGYAQAGEMDRATEIFEAMGVR-NVISWNSLITG 430
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 136/279 (48%), Gaps = 23/279 (8%)
Query: 323 FIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKR 382
F Q I + G+I+ A+ F I + A++N+++ F +NG + DARQLF+ M +R
Sbjct: 18 FNQNKKIIYLGKQGKIDEAKRVFSNVIHKNHATYNSMVTVFAKNGRVSDARQLFDKMSQR 77
Query: 383 DVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAH 442
++ SW+ MI+GY N NM +E H + D + + + + G L++ R
Sbjct: 78 NLVSWNTMIAGYLHN---NM-VEEAHKLFDLMAERDNFSWALMITCYTRKGMLEKARELF 133
Query: 443 EYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGD 502
E V + L+ A+I YAK G + A +VF + + +N+++ G +G
Sbjct: 134 ELVPDK---LDTACWNAMIAGYAKKGRFDDAEKVFEKM--PVKDLVSYNSMLAGYTQNGK 188
Query: 503 ANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERY--FKSMKSVYNVEPDLKH 560
L +K + + +RN+ ++ G ++ C DLG + F+ + +P+
Sbjct: 189 MGLAMKFFERMAERNVVSWNLMVAGFVNNC------DLGSAWELFEKIP-----DPNAVS 237
Query: 561 YGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAA 599
+ M+ R G++ +A ++ MP K +VV W ++AA
Sbjct: 238 WVTMLCGFARHGKIVEARKLFDRMPCK-NVVSWNAMIAA 275
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 148/314 (47%), Gaps = 30/314 (9%)
Query: 298 GRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWN 357
G+ E ++ S ++ Y+ +++ +A GR++ AR F+ + ++ SWN
Sbjct: 28 GKQGKIDEAKRVFSNVIHKNHATYN----SMVTVFAKNGRVSDARQLFDKMSQRNLVSWN 83
Query: 358 ALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKP 417
+IAG++ N M+E+A +LF+ M +RD +SW+ MI+ Y + A ELF + P
Sbjct: 84 TMIAGYLHNNMVEEAHKLFDLMAERDNFSWALMITCYTRKGMLEKARELFE------LVP 137
Query: 418 NEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLS-AAIIDMYAKCGSINTAFEV 476
+++ IA G K+GR+ + + + D +S +++ Y + G + A +
Sbjct: 138 DKLDTACWNAMIA--GYAKKGRFDDAEKVFEKMPVKDLVSYNSMLAGYTQNGKMGLAMKF 195
Query: 477 FYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAG 536
F + +R +V WN ++ G + D +++ + N+++++ +L G
Sbjct: 196 FERMAER--NVVSWNLMVAGFVNNCDLGSAWELFEKIPDP----NAVSWVTMLCGFARHG 249
Query: 537 LVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTL 596
+ + F M ++ + M+ + Q+++A ++ + P K D V W T+
Sbjct: 250 KIVEARKLFDRMPC-----KNVVSWNAMIAAYVQDLQIDEAVKLFKETPYK-DCVSWTTM 303
Query: 597 LAASRIHGNVEVGE 610
I+G V VG+
Sbjct: 304 -----INGYVRVGK 312
>gi|15223099|ref|NP_172286.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174869|sp|Q9LN01.1|PPR21_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g08070
gi|8778839|gb|AAF79838.1|AC026875_18 T6D22.15 [Arabidopsis thaliana]
gi|332190118|gb|AEE28239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 741
Score = 351 bits (900), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 202/545 (37%), Positives = 307/545 (56%), Gaps = 37/545 (6%)
Query: 123 YTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVI 182
+ +M G A + AL+++ M LG++PN T V+ S E + +HG V+
Sbjct: 102 WNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVL 161
Query: 183 KLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARE 242
KL D + + T+L++MY L +A +FD+ R++VS+ ++ G+A G +E A++
Sbjct: 162 KLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQK 221
Query: 243 LFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMA 302
LF+ IP KDVVSW MI GY + EAL +++ M+ + P++ +V ++SAC ++ +
Sbjct: 222 LFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGS 281
Query: 303 FGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFE-LGIKDHIASWNALIA 361
G Q+H I GF I +I Y+ CG + A FE L KD + SWN LI
Sbjct: 282 IELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKD-VISWNTLIG 340
Query: 362 GFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEIT 421
G+ + ++ AL LF M+ +G PN++T
Sbjct: 341 GYTHMNLYKE-------------------------------ALLLFQEMLRSGETPNDVT 369
Query: 422 MVSVFCAIASSGTLKEGRWAHEYVLN--NSITLNDNLSAAIIDMYAKCGSINTAFEVFYH 479
M+S+ A A G + GRW H Y+ +T +L ++IDMYAKCG I A +VF
Sbjct: 370 MLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNS 429
Query: 480 IRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVD 539
I + S+S WNA+I G AMHG A+ + ++S + K I+ + ITF+G+LS C H+G++D
Sbjct: 430 ILHK--SLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLD 487
Query: 540 LGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAA 599
LG F++M Y + P L+HYGCM+DLLG +G ++AEE+I M M+ D VIW +LL A
Sbjct: 488 LGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKA 547
Query: 600 SRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLP 659
++HGNVE+GE A++L ++P + S VLLSNIYA AGRW + R + D GMK++P
Sbjct: 548 CKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVP 607
Query: 660 GFSGV 664
G S +
Sbjct: 608 GCSSI 612
Score = 192 bits (488), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 119/391 (30%), Positives = 199/391 (50%), Gaps = 18/391 (4%)
Query: 240 ARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGR 299
A +F+ I +++ W TM G+ AL +Y M+ G+ PN ++ +C +
Sbjct: 87 AISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAK 146
Query: 300 AMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNAL 359
+ AF EG QIH ++K G D ++ ++I Y GR+ A F+ + S+ AL
Sbjct: 147 SKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTAL 206
Query: 360 IAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNE 419
I G+ G IE+A++LF+ + +DV SW+AMISGYA+ ALELF M+ V+P+E
Sbjct: 207 IKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDE 266
Query: 420 ITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYH 479
TMV+V A A SG+++ GR H ++ ++ N + A+ID+Y+KCG + TA +F
Sbjct: 267 STMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFER 326
Query: 480 IRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVD 539
+ + V WN +I G L ++ ++ + N +T + +L C H G +D
Sbjct: 327 LPYK--DVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAID 384
Query: 540 LGERYF-----KSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWG 594
+G R+ K +K V N L+ ++D+ + G +E A +V S+ K+ + W
Sbjct: 385 IG-RWIHVYIDKRLKGVTNAS-SLR--TSLIDMYAKCGDIEAAHQVFNSILHKS-LSSWN 439
Query: 595 TLLAASRIHGNVEVG----ERAAKSLAGLQP 621
++ +HG + R K G+QP
Sbjct: 440 AMIFGFAMHGRADASFDLFSRMRK--IGIQP 468
Score = 181 bits (460), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 114/412 (27%), Positives = 191/412 (46%), Gaps = 64/412 (15%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
L+ C+ A +GQQIH + K G + + ++ SLI++Y + G + A +FD D
Sbjct: 141 LKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDV 200
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
V+ +I GY + +A+++FD+ P+K VS+ +MI G+A+ ++EALE+F+DM
Sbjct: 201 VSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKT 260
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
V P+E T+ +V+S+ G I R +H + + I L+++Y C L A
Sbjct: 261 NVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETA 320
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLS 269
LF+ + ++++SWN ++ G+ L +
Sbjct: 321 CGLFERLPYKDVISWNTLIGGYTHMNLYK------------------------------- 349
Query: 270 EALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVK--AGFDCYDFIQAT 327
EAL +++ ML G PNDV ++ ++ AC A G IH I K G ++ +
Sbjct: 350 EALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTS 409
Query: 328 IIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSW 387
+I YA CG I A F + ++SWNA+I GF +G + + LF+ M+K
Sbjct: 410 LIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRK------ 463
Query: 388 SAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGR 439
G++P++IT V + A + SG L GR
Sbjct: 464 -------------------------IGIQPDDITFVGLLSACSHSGMLDLGR 490
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 125/289 (43%), Gaps = 64/289 (22%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E +V+ + C+ ++ G+Q+H I G SN I N+LI+LY+KCG + A +F+
Sbjct: 266 ESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFE 325
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
D ++ N +I GY + ++EAL +
Sbjct: 326 RLPYKDVISWNTLIGGY-------------------------------THMNLYKEALLL 354
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLM--IDGFVIISTNLLNMY 200
F++M G PN+VT+ S++ + HLG I R +H + K + + + T+L++MY
Sbjct: 355 FQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMY 414
Query: 201 CVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMID 260
C + A +F+ + +++ SWN M+ GFA G + + +LF R
Sbjct: 415 AKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSR-------------- 460
Query: 261 GYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQI 309
M GI P+D+ V L+SAC + G I
Sbjct: 461 -----------------MRKIGIQPDDITFVGLLSACSHSGMLDLGRHI 492
>gi|224096022|ref|XP_002310520.1| predicted protein [Populus trichocarpa]
gi|222853423|gb|EEE90970.1| predicted protein [Populus trichocarpa]
Length = 710
Score = 350 bits (899), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 207/628 (32%), Positives = 332/628 (52%), Gaps = 40/628 (6%)
Query: 42 GQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIR 101
+ +H + ++ FIQN LI++Y KCG + A+ +FD S + + N +IS +R
Sbjct: 43 ARSVHGRLIQTPFCEEVFIQNRLIDVYGKCGYLDYARKVFDRMSERNVFSFNSIISTLMR 102
Query: 102 NDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASV 161
++++ +F P K S+ SMI GFAQ+D + EAL+ F M + N+ + S
Sbjct: 103 WGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFEEALDWFVRMHRDDFVLNDYSFGSG 162
Query: 162 ISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNI 221
+S+ L + +HGL+ K V + + L++ Y C
Sbjct: 163 LSACSRLKDLKLGAQIHGLISKSKYSLDVFMGSGLIDFYSKC------------------ 204
Query: 222 VSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCD 281
GLV AR +F+ + K+VVSW +I Y Q EAL + M
Sbjct: 205 -------------GLVGCARRVFDGMEEKNVVSWNCLITCYEQNGPAIEALEAFGRMTEL 251
Query: 282 GIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQA-TIIHFYAACGRINL 340
G P++V + ++SAC AF EG+QIH+ +VK+ D I ++ YA CGR+N
Sbjct: 252 GFKPDEVTLASVVSACATLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYAKCGRVNE 311
Query: 341 ARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQP 400
AR F+ + S +++G+ ++ ++ AR +F ++++D+ SW+A+I+GY QN +
Sbjct: 312 ARCVFDRMPVRNAVSETTMVSGYAKSASVKAARSMFATIKQKDIVSWNALIAGYTQNGEN 371
Query: 401 NMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDN----- 455
AL LF + V P T ++ A A+ L+ GR AH +V+ +
Sbjct: 372 EEALGLFRMLKRESVCPTHYTFGNLLNASANLADLELGRQAHSHVVKHGFRFQSGEEPDI 431
Query: 456 -LSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLE 514
+ ++IDMY KCGS+ VF ++ ++ VS WN +I G A +G L+++ +
Sbjct: 432 FVGNSLIDMYMKCGSVEEGLRVFENMVEKD-HVS-WNTMIIGYAQNGYGMEALELFQKML 489
Query: 515 KRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQL 574
+ K + +T IG L C HAGLV+ G RYF SM + + P HY CMVDLLGRAG L
Sbjct: 490 ESGEKPDHVTMIGTLCACSHAGLVEEGRRYFFSMTKEHGLLPVKDHYTCMVDLLGRAGCL 549
Query: 575 EDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIY 634
E+A+++I SMP + D V+W +LL+A ++H N+ +G+ A+ + + P+ VLL+N+Y
Sbjct: 550 EEAKDLIESMPKQPDAVVWSSLLSACKVHRNITLGKYVAEKIFEIDPTSSGPYVLLANMY 609
Query: 635 ADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
++ GRW DA S+RK MR G+ + PG S
Sbjct: 610 SELGRWGDAVSVRKLMRRRGVVKQPGCS 637
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 148/502 (29%), Positives = 229/502 (45%), Gaps = 81/502 (16%)
Query: 20 SDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKS 79
+DY S L CS + G QIH LI KS + F+ + LI+ Y+KCGL+ A+
Sbjct: 155 NDYSFG--SGLSACSRLKDLKLGAQIHGLISKSKYSLDVFMGSGLIDFYSKCGLVGCARR 212
Query: 80 MFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREA 139
+FD + V+ N +I+ Y QN EA
Sbjct: 213 VFDGMEEKNVVSWNCLITCY-------------------------------EQNGPAIEA 241
Query: 140 LEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGF---VIISTNL 196
LE F M LG P+EVTLASV+S+ L E +H V+K D F +I+ L
Sbjct: 242 LEAFGRMTELGFKPDEVTLASVVSACATLAAFKEGVQIHARVVK--SDKFRNDLILGNAL 299
Query: 197 LNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWG 256
++MY C + EAR +FD M RN VS M++G+AK+ V+ AR +F I KD+VSW
Sbjct: 300 VDMYAKCGRVNEARCVFDRMPVRNAVSETTMVSGYAKSASVKAARSMFATIKQKDIVSWN 359
Query: 257 TMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKA 316
+I GY Q EAL ++R + + + P +L++A G Q HS +VK
Sbjct: 360 ALIAGYTQNGENEEALGLFRMLKRESVCPTHYTFGNLLNASANLADLELGRQAHSHVVKH 419
Query: 317 GFDCYD------FIQATIIHFYAACGRINLARLQFELGI-KDHIASWNALIAGFIRNGMI 369
GF F+ ++I Y CG + FE + KDH+ SWN +I G+ +N
Sbjct: 420 GFRFQSGEEPDIFVGNSLIDMYMKCGSVEEGLRVFENMVEKDHV-SWNTMIIGYAQN--- 475
Query: 370 EDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAI 429
GY ALELF M+++G KP+ +TM+ CA
Sbjct: 476 -----------------------GYGME-----ALELFQKMLESGEKPDHVTMIGTLCAC 507
Query: 430 ASSGTLKEG-RWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVS 488
+ +G ++EG R+ + + + ++D+ + G + A ++ + + +V
Sbjct: 508 SHAGLVEEGRRYFFSMTKEHGLLPVKDHYTCMVDLLGRAGCLEEAKDLIESMPKQPDAVV 567
Query: 489 PWNAIICGLAMHGDANLTLKIY 510
W++++ +H N+TL Y
Sbjct: 568 -WSSLLSACKVH--RNITLGKY 586
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 144/503 (28%), Positives = 226/503 (44%), Gaps = 69/503 (13%)
Query: 158 LASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMK 217
A ++ V L + R +HG +I+ V I L+++Y C L AR +FD M
Sbjct: 27 FAKLLDLCVKLRSSRDARSVHGRLIQTPFCEEVFIQNRLIDVYGKCGYLDYARKVFDRMS 86
Query: 218 ERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRA 277
ERN+ S+N +++ + G V+ + LF +P KD SW +MI G+ Q +R EAL +
Sbjct: 87 ERNVFSFNSIISTLMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFEEALDWFVR 146
Query: 278 MLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGR 337
M D ND +SAC R G QIH +I K+ + F+ + +I FY+ CG
Sbjct: 147 MHRDDFVLNDYSFGSGLSACSRLKDLKLGAQIHGLISKSKYSLDVFMGSGLIDFYSKCGL 206
Query: 338 INLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQN 397
+ AR F+ + ++ SWN LI + Y QN
Sbjct: 207 VGCARRVFDGMEEKNVVSWNCLI-------------------------------TCYEQN 235
Query: 398 EQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLND-NL 456
ALE F M + G KP+E+T+ SV A A+ KEG H V+ + ND L
Sbjct: 236 GPAIEALEAFGRMTELGFKPDEVTLASVVSACATLAAFKEGVQIHARVVKSDKFRNDLIL 295
Query: 457 SAAIIDMYAKCGSINTAFEVFYHIRDR-----TTSVS----------------------- 488
A++DMYAKCG +N A VF + R TT VS
Sbjct: 296 GNALVDMYAKCGRVNEARCVFDRMPVRNAVSETTMVSGYAKSASVKAARSMFATIKQKDI 355
Query: 489 -PWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGER-YFK 546
WNA+I G +G+ L ++ L++ ++ TF +L+ + ++LG + +
Sbjct: 356 VSWNALIAGYTQNGENEEALGLFRMLKRESVCPTHYTFGNLLNASANLADLELGRQAHSH 415
Query: 547 SMKSVYNV----EPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRI 602
+K + EPD+ ++D+ + G +E+ V +M ++ D V W T++
Sbjct: 416 VVKHGFRFQSGEEPDIFVGNSLIDMYMKCGSVEEGLRVFENM-VEKDHVSWNTMIIGYAQ 474
Query: 603 HG-NVEVGERAAKSL-AGLQPSH 623
+G +E E K L +G +P H
Sbjct: 475 NGYGMEALELFQKMLESGEKPDH 497
>gi|356540844|ref|XP_003538894.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 748
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 207/620 (33%), Positives = 337/620 (54%), Gaps = 21/620 (3%)
Query: 47 SLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSC-STLDPVACNIMISGYIRNDRL 105
S +F E + F +I Y + G + +A+ + + LD N MI+GY + +
Sbjct: 99 SELFDVMPERDNFSWALMITCYTRKGKLEKARELLELVPDKLDTACWNAMIAGYAKKGQF 158
Query: 106 NDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSS 165
NDA++VF++ P K VSY SM+ G+ QN AL+ F M V+ + +A + S
Sbjct: 159 NDAKKVFEQMPAKDLVSYNSMLAGYTQNGKMHLALQFFESMTERNVVSWNLMVAGYVKSG 218
Query: 166 VHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWN 225
L W+ + + + + + +L + EAR LFD M +N+VSWN
Sbjct: 219 -DLSSAWQ-------LFEKIPNPNAVSWVTMLCGLAKYGKMAEARELFDRMPSKNVVSWN 270
Query: 226 VMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAP 285
M+ + + V+ A +LF+++P KD VSW T+I+GY++V +L EA +Y M C I
Sbjct: 271 AMIATYVQDLQVDEAVKLFKKMPHKDSVSWTTIINGYIRVGKLDEARQVYNQMPCKDITA 330
Query: 286 NDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQF 345
++ LI GR E Q+ S I C++ ++I Y+ GR++ A F
Sbjct: 331 QTALMSGLIQN-GR---IDEADQMFSRIGAHDVVCWN----SMIAGYSRSGRMDEALNLF 382
Query: 346 -ELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMAL 404
++ IK+ + SWN +I+G+ + G ++ A ++F M+++++ SW+++I+G+ QN AL
Sbjct: 383 RQMPIKNSV-SWNTMISGYAQAGQMDRATEIFQAMREKNIVSWNSLIAGFLQNNLYLDAL 441
Query: 405 ELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMY 464
+ M G KP++ T A A+ L+ G HEY+L + + + A+I MY
Sbjct: 442 KSLVMMGKEGKKPDQSTFACTLSACANLAALQVGNQLHEYILKSGYMNDLFVGNALIAMY 501
Query: 465 AKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSIT 524
AKCG + +A +VF I + WN++I G A++G AN K + + + + +T
Sbjct: 502 AKCGRVQSAEQVFRDIE--CVDLISWNSLISGYALNGYANKAFKAFEQMSSERVVPDEVT 559
Query: 525 FIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSM 584
FIG+LS C HAGL + G FK M + +EP +HY C+VDLLGR G+LE+A +R M
Sbjct: 560 FIGMLSACSHAGLANQGLDIFKCMIEDFAIEPLAEHYSCLVDLLGRVGRLEEAFNTVRGM 619
Query: 585 PMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAF 644
+KA+ +WG+LL A R+H N+E+G AA+ L L+P + + + LSN++A+AGRWE+
Sbjct: 620 KVKANAGLWGSLLGACRVHKNLELGRFAAERLFELEPHNASNYITLSNMHAEAGRWEEVE 679
Query: 645 SIRKEMRDCGMKRLPGFSGV 664
+R MR + PG S +
Sbjct: 680 RVRMLMRGKRAGKQPGCSWI 699
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 115/420 (27%), Positives = 200/420 (47%), Gaps = 38/420 (9%)
Query: 32 YCSAHIAVSQGQQIHSLI--FKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
Y S +Q ++H + F+S E N N ++ Y K G +S A +F+ +
Sbjct: 176 YNSMLAGYTQNGKMHLALQFFESMTERNVVSWNLMVAGYVKSGDLSSAWQLFEKIPNPNA 235
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
V+ M+ G + ++ +ARE+FD+ P K VS+ +MI + Q+ EA+++F+ M
Sbjct: 236 VSWVTMLCGLAKYGKMAEARELFDRMPSKNVVSWNAMIATYVQDLQVDEAVKLFKKM--- 292
Query: 150 GVIPNEVTLASVISSSVHLGGIWECR----------------MLHGLVIKLMIDGF---- 189
+ V+ ++I+ + +G + E R ++ GL+ ID
Sbjct: 293 -PHKDSVSWTTIINGYIRVGKLDEARQVYNQMPCKDITAQTALMSGLIQNGRIDEADQMF 351
Query: 190 -------VIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARE 242
V+ +++ Y + EA +LF +M +N VSWN M++G+A+AG ++ A E
Sbjct: 352 SRIGAHDVVCWNSMIAGYSRSGRMDEALNLFRQMPIKNSVSWNTMISGYAQAGQMDRATE 411
Query: 243 LFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMA 302
+F+ + K++VSW ++I G+LQ +AL M +G P+ +SAC A
Sbjct: 412 IFQAMREKNIVSWNSLIAGFLQNNLYLDALKSLVMMGKEGKKPDQSTFACTLSACANLAA 471
Query: 303 FGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAG 362
G Q+H I+K+G+ F+ +I YA CGR+ A F + SWN+LI+G
Sbjct: 472 LQVGNQLHEYILKSGYMNDLFVGNALIAMYAKCGRVQSAEQVFRDIECVDLISWNSLISG 531
Query: 363 FIRNGMIEDARQLFNNMQKR----DVYSWSAMISGYAQNEQPNMALELFHGMV-DAGVKP 417
+ NG A + F M D ++ M+S + N L++F M+ D ++P
Sbjct: 532 YALNGYANKAFKAFEQMSSERVVPDEVTFIGMLSACSHAGLANQGLDIFKCMIEDFAIEP 591
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 113/437 (25%), Positives = 207/437 (47%), Gaps = 69/437 (15%)
Query: 208 EARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVER 267
+AR LFD+M RN+VSWN M+ G+ +VE A ELF+ +P +D SW MI Y + +
Sbjct: 66 DARQLFDQMSLRNLVSWNTMIAGYLHNNMVEEASELFDVMPERDNFSWALMITCYTRKGK 125
Query: 268 LSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQAT 327
L +A + + P+ L +AC AM G
Sbjct: 126 LEKARELLE------LVPD-----KLDTACWNAMIAG----------------------- 151
Query: 328 IIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSW 387
YA G+ N A+ FE + S+N+++AG+ +NG + A Q F +M +R+V SW
Sbjct: 152 ----YAKKGQFNDAKKVFEQMPAKDLVSYNSMLAGYTQNGKMHLALQFFESMTERNVVSW 207
Query: 388 SAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLN 447
+ M++GY ++ + A +LF + + PN ++ V++ C +A G + E R + + +
Sbjct: 208 NLMVAGYVKSGDLSSAWQLFEKIPN----PNAVSWVTMLCGLAKYGKMAEARELFDRMPS 263
Query: 448 -NSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLT 506
N ++ N A+I Y + ++ A ++F + + SVS W II G G +
Sbjct: 264 KNVVSWN-----AMIATYVQDLQVDEAVKLFKKMPHK-DSVS-WTTIINGYIRVGKLDEA 316
Query: 507 LKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVD 566
++Y+ + ++I + G++ G +D ++ F + + D+ + M+
Sbjct: 317 RQVYNQMPCKDITAQTALMSGLIQN----GRIDEADQMFSRIGA-----HDVVCWNSMIA 367
Query: 567 LLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPS 626
R+G++++A + R MP+K + V W T+++ G + +RA + ++ + S
Sbjct: 368 GYSRSGRMDEALNLFRQMPIK-NSVSWNTMISGYAQAGQM---DRATEIFQAMREKNIVS 423
Query: 627 ------RVLLSNIYADA 637
L +N+Y DA
Sbjct: 424 WNSLIAGFLQNNLYLDA 440
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 73/163 (44%), Gaps = 37/163 (22%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
L C+ A+ G Q+H I KSG ++ F+ N+LI +YAKCG + A+ +F +D
Sbjct: 463 LSACANLAALQVGNQLHEYILKSGYMNDLFVGNALIAMYAKCGRVQSAEQVFRDIECVDL 522
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
++ N +ISGY N G+A +A + F M
Sbjct: 523 ISWNSLISGYALN--------------------------GYAN-----KAFKAFEQMSSE 551
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGL-VIKLMIDGFVI 191
V+P+EVT ++S+ H G GL + K MI+ F I
Sbjct: 552 RVVPDEVTFIGMLSACSHAG-----LANQGLDIFKCMIEDFAI 589
>gi|413934265|gb|AFW68816.1| hypothetical protein ZEAMMB73_462632 [Zea mays]
Length = 648
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 174/440 (39%), Positives = 264/440 (60%), Gaps = 4/440 (0%)
Query: 225 NVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDG-- 282
N ++ ++ G + AR LF+ P +DVVSW T+I GY++ EAL ++ + DG
Sbjct: 160 NAAMHFWSVRGPMAFARRLFDESPVRDVVSWNTLIGGYVRSGLPREALELFWRLAEDGNA 219
Query: 283 IAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLAR 342
+ P++V ++ +S C + G ++H + G C + ++ Y CG + LA
Sbjct: 220 VRPDEVTVIGAVSGCAQMGDLELGKRLHEFVDNKGVRCTVRLMNAVMDMYVKCGSLELAN 279
Query: 343 LQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNM 402
FE SW +I G R GM+EDAR LF+ M +RDV+ W+A+++GY QN+Q
Sbjct: 280 SVFERISNRTAVSWTTMIVGHARLGMMEDARMLFDEMPERDVFPWNALMAGYVQNKQGKE 339
Query: 403 ALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIID 462
A+ LFH M + V PNEITMV++ A + G L+ G W H Y+ + + L+ L +++D
Sbjct: 340 AIALFHEMQKSKVDPNEITMVNLLSACSQLGALEMGMWVHHYIDRHKLHLSVALGTSLVD 399
Query: 463 MYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNS 522
MYAKCG+I A VF I + W ++ICGLA HG A+ ++ + + ++ +
Sbjct: 400 MYAKCGNIKKAICVFNEIP--VQNALTWTSMICGLANHGHADEAIEYFQRMIDLGLQPDE 457
Query: 523 ITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIR 582
ITFIGVLS CCHAGLV+ G ++F M + Y++E +KHY CM+DLLGRAG L++AE+++
Sbjct: 458 ITFIGVLSACCHAGLVEAGRQFFSLMHAKYHLERKMKHYSCMIDLLGRAGHLDEAEQLVN 517
Query: 583 SMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWED 642
+MPM D V+WG L A R+HGN+ +GE+AA L L PS VLL+N+YA+A +
Sbjct: 518 AMPMDPDAVVWGALFFACRMHGNITLGEKAAMKLVELDPSDSGIYVLLANMYAEANMRKK 577
Query: 643 AFSIRKEMRDCGMKRLPGFS 662
A +R MR G++++PG S
Sbjct: 578 ADKVRVMMRHLGVEKVPGCS 597
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 109/406 (26%), Positives = 201/406 (49%), Gaps = 39/406 (9%)
Query: 108 AREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILG--VIPNEVTLASVISSS 165
AR +FD++P++ VS+ ++I G+ ++ REALE+F + G V P+EVT+ +S
Sbjct: 175 ARRLFDESPVRDVVSWNTLIGGYVRSGLPREALELFWRLAEDGNAVRPDEVTVIGAVSGC 234
Query: 166 VHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWN 225
+G + + LH V + V + +++MY C SL A S+F+ + R VSW
Sbjct: 235 AQMGDLELGKRLHEFVDNKGVRCTVRLMNAVMDMYVKCGSLELANSVFERISNRTAVSWT 294
Query: 226 VMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAP 285
M+ G A+ G++E AR LF+ +P +DV W ++ GY+Q ++ EA+ ++ M + P
Sbjct: 295 TMIVGHARLGMMEDARMLFDEMPERDVFPWNALMAGYVQNKQGKEAIALFHEMQKSKVDP 354
Query: 286 NDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQF 345
N++ +V+L+SAC + A G+ +H I + + +++ YA CG I A F
Sbjct: 355 NEITMVNLLSACSQLGALEMGMWVHHYIDRHKLHLSVALGTSLVDMYAKCGNIKKAICVF 414
Query: 346 -ELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMAL 404
E+ +++ + +W ++I G +G ++ A+
Sbjct: 415 NEIPVQNAL-TWTSMICGLANHGHADE-------------------------------AI 442
Query: 405 ELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLS--AAIID 462
E F M+D G++P+EIT + V A +G ++ GR +++ L + + +ID
Sbjct: 443 EYFQRMIDLGLQPDEITFIGVLSACCHAGLVEAGRQFFS-LMHAKYHLERKMKHYSCMID 501
Query: 463 MYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLK 508
+ + G ++ A ++ + +V W A+ MHG+ L K
Sbjct: 502 LLGRAGHLDEAEQLVNAMPMDPDAVV-WGALFFACRMHGNITLGEK 546
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 97/387 (25%), Positives = 162/387 (41%), Gaps = 73/387 (18%)
Query: 272 LTMYRAMLCDGIA-PNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIH 330
L +YRA+L G A P+ + LI AC R G + + K GF F+ +H
Sbjct: 105 LPLYRALLHSGSARPDHLTFPFLIKACARLQYRSYGAAVLGHVQKLGFSADVFVVNAAMH 164
Query: 331 FYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAM 390
F++ G + AR F+ + SWN LI G++R+G+
Sbjct: 165 FWSVRGPMAFARRLFDESPVRDVVSWNTLIGGYVRSGL---------------------- 202
Query: 391 ISGYAQNEQPNMALELFHGMVDAG--VKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNN 448
P ALELF + + G V+P+E+T++ A G L+ G+ HE+V N
Sbjct: 203 ---------PREALELFWRLAEDGNAVRPDEVTVIGAVSGCAQMGDLELGKRLHEFVDNK 253
Query: 449 SITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTT----------------------- 485
+ L A++DMY KCGS+ A VF I +RT
Sbjct: 254 GVRCTVRLMNAVMDMYVKCGSLELANSVFERISNRTAVSWTTMIVGHARLGMMEDARMLF 313
Query: 486 ------SVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVD 539
V PWNA++ G + + ++ +++K + N IT + +LS C G ++
Sbjct: 314 DEMPERDVFPWNALMAGYVQNKQGKEAIALFHEMQKSKVDPNEITMVNLLSACSQLGALE 373
Query: 540 LG---ERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTL 596
+G Y K +V +VD+ + G ++ A V +P++ + + W ++
Sbjct: 374 MGMWVHHYIDRHKLHLSVALGTS----LVDMYAKCGNIKKAICVFNEIPVQ-NALTWTSM 428
Query: 597 LAASRIHGNVEVGERAAKSL--AGLQP 621
+ HG+ + + + GLQP
Sbjct: 429 ICGLANHGHADEAIEYFQRMIDLGLQP 455
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 87/370 (23%), Positives = 171/370 (46%), Gaps = 62/370 (16%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E+ ++ A+ C+ + G+++H + G+ + N+++++Y KCG + A S+F+
Sbjct: 224 EVTVIGAVSGCAQMGDLELGKRLHEFVDNKGVRCTVRLMNAVMDMYVKCGSLELANSVFE 283
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
S V+ MI G+ R + DAR +FD+ P + + +++ G+ QN +EA+ +
Sbjct: 284 RISNRTAVSWTTMIVGHARLGMMEDARMLFDEMPERDVFPWNALMAGYVQNKQGKEAIAL 343
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
F +M+ V PNE+T+ +++S+ LG + +H + + + V + T+L++MY
Sbjct: 344 FHEMQKSKVDPNEITMVNLLSACSQLGALEMGMWVHHYIDRHKLHLSVALGTSLVDMYAK 403
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
C ++ +A +F+E+ +N ++W M+ G A G + A E F+R MID
Sbjct: 404 CGNIKKAICVFNEIPVQNALTWTSMICGLANHGHADEAIEYFQR-----------MIDL- 451
Query: 263 LQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD 322
G+ P+++ + ++SAC H+ +V+AG +
Sbjct: 452 -------------------GLQPDEITFIGVLSAC-----------CHAGLVEAGRQFFS 481
Query: 323 FIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ-K 381
+ A+ E +K ++ +I R G +++A QL N M
Sbjct: 482 LMH---------------AKYHLERKMK----HYSCMIDLLGRAGHLDEAEQLVNAMPMD 522
Query: 382 RDVYSWSAMI 391
D W A+
Sbjct: 523 PDAVVWGALF 532
>gi|356561853|ref|XP_003549191.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Glycine max]
Length = 748
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 207/652 (31%), Positives = 348/652 (53%), Gaps = 50/652 (7%)
Query: 26 LVSALRYC--SAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+ AL C S+ ++SQ +Q H+LI + L S+T + SL++ YA +S +
Sbjct: 1 MFHALSQCLSSSTASLSQARQAHALILRLNLFSDTQLTTSLLSFYANALSLSTPQ----- 55
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
++ +S ++ P S++S+I FA++ + L F
Sbjct: 56 --------LSLTLSSHL---------------PHPTLFSFSSLIHAFARSHHFPHVLTTF 92
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFV---IISTNLLNMY 200
+ L +IP+ L S I S L + + LH GF+ I++++L +MY
Sbjct: 93 SHLHPLRLIPDAFLLPSAIKSCASLRALDPGQQLHAFAAA---SGFLTDSIVASSLTHMY 149
Query: 201 CVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPS----KDVVSWG 256
C +++AR LFD M +R++V W+ M+ G+++ GLVE A+ELF + S ++VSW
Sbjct: 150 LKCDRILDARKLFDRMPDRDVVVWSAMIAGYSRLGLVEEAKELFGEMRSGGVEPNLVSWN 209
Query: 257 TMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKA 316
M+ G+ EA+ M+R ML G P+ + ++ A G G Q+H ++K
Sbjct: 210 GMLAGFGNNGFYDEAVGMFRMMLVQGFWPDGSTVSCVLPAVGCLEDVVVGAQVHGYVIKQ 269
Query: 317 GFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLF 376
G F+ + ++ Y CG + F+ + I S NA + G RNGM++ A ++F
Sbjct: 270 GLGSDKFVVSAMLDMYGKCGCVKEMSRVFDEVEEMEIGSLNAFLTGLSRNGMVDTALEVF 329
Query: 377 NNMQKR----DVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASS 432
N + + +V +W+++I+ +QN + ALELF M GV+PN +T+ S+ A +
Sbjct: 330 NKFKDQKMELNVVTWTSIIASCSQNGKDLEALELFRDMQAYGVEPNAVTIPSLIPACGNI 389
Query: 433 GTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVS--PW 490
L G+ H + L I + + +A+IDMYAKCG I A F D+ ++++ W
Sbjct: 390 SALMHGKEIHCFSLRRGIFDDVYVGSALIDMYAKCGRIQLARRCF----DKMSALNLVSW 445
Query: 491 NAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKS 550
NA++ G AMHG A T++++ + + K + +TF VLS C GL + G R + SM
Sbjct: 446 NAVMKGYAMHGKAKETMEMFHMMLQSGQKPDLVTFTCVLSACAQNGLTEEGWRCYNSMSE 505
Query: 551 VYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGE 610
+ +EP ++HY C+V LL R G+LE+A +I+ MP + D +WG LL++ R+H N+ +GE
Sbjct: 506 EHGIEPKMEHYACLVTLLSRVGKLEEAYSIIKEMPFEPDACVWGALLSSCRVHNNLSLGE 565
Query: 611 RAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
AA+ L L+P++ + +LLSNIYA G W++ IR+ M+ G+++ PG+S
Sbjct: 566 IAAEKLFFLEPTNPGNYILLSNIYASKGLWDEENRIREVMKSKGLRKNPGYS 617
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 64/129 (49%), Gaps = 8/129 (6%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+ + S + C A+ G++IH + G+ + ++ ++LI++YAKCG I A+ FD
Sbjct: 377 VTIPSLIPACGNISALMHGKEIHCFSLRRGIFDDVYVGSALIDMYAKCGRIQLARRCFDK 436
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFD------KTPIKCCVSYTSMIMGFAQNDCWR 137
S L+ V+ N ++ GY + + + E+F + P V++T ++ AQN
Sbjct: 437 MSALNLVSWNAVMKGYAMHGKAKETMEMFHMMLQSGQKPD--LVTFTCVLSACAQNGLTE 494
Query: 138 EALEVFRDM 146
E + M
Sbjct: 495 EGWRCYNSM 503
>gi|168044807|ref|XP_001774871.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673765|gb|EDQ60283.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 902
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 206/639 (32%), Positives = 328/639 (51%), Gaps = 95/639 (14%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+ +S L S+ A+ G+ +HS I +G ES+T + +L+ +YAKCG
Sbjct: 228 ITYISVLNAFSSPAALKWGKAVHSRILNAGHESDTAVGTALVKMYAKCG----------- 276
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
D R+VF+K + +++ +MI G A+ W EA EV+
Sbjct: 277 --------------------SYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGYWEEASEVY 316
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
M+ GV+PN++T ++++ V+ + + +H V K + + L++MY C
Sbjct: 317 NQMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGFTSDIGVQNALISMYSRC 376
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYL 263
S+ +A R +F+++ KDV+SW MI G
Sbjct: 377 GSIKDA-------------------------------RLVFDKMVRKDVISWTAMIGGLA 405
Query: 264 QVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDF 323
+ +EALT+Y+ M G+ PN V +++AC A G +IH +V+AG
Sbjct: 406 KSGFGAEALTVYQEMQQAGVEPNRVTYTSILNACSSPAALEWGRRIHQQVVEAGLATDAH 465
Query: 324 IQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRD 383
+ T+++ Y+ CG + +DARQ+F+ M +RD
Sbjct: 466 VGNTLVNMYSMCGSV-------------------------------KDARQVFDRMIQRD 494
Query: 384 VYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHE 443
+ +++AMI GYA + AL+LF + + G+KP+++T +++ A A+SG+L+ R H
Sbjct: 495 IVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAREIHT 554
Query: 444 YVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDA 503
V + ++ A++ YAKCGS + A VF + R +V WNAII G A HG
Sbjct: 555 LVRKGGFFSDTSVGNALVSTYAKCGSFSDASIVFEKMTKR--NVISWNAIIGGSAQHGRG 612
Query: 504 NLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGC 563
L+++ ++ +K + +TF+ +LS C HAGL++ G RYF SM + + P ++HYGC
Sbjct: 613 QDALQLFERMKMEGVKPDIVTFVSLLSACSHAGLLEEGRRYFCSMSQDFAIIPTIEHYGC 672
Query: 564 MVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSH 623
MVDLLGRAGQL++AE +I++MP +A+ IWG LL A RIHGNV V ERAA+S L +
Sbjct: 673 MVDLLGRAGQLDEAEALIKTMPFQANTRIWGALLGACRIHGNVPVAERAAESSLKLDLDN 732
Query: 624 GPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
V LS++YA AG W+ A +RK M G+ + PG S
Sbjct: 733 AVVYVALSHMYAAAGMWDSAAKLRKLMEQRGVTKEPGRS 771
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 159/653 (24%), Positives = 283/653 (43%), Gaps = 114/653 (17%)
Query: 10 FNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYA 69
Q A + +SDY + L+ C + G+Q+H I + + + N+LIN+Y
Sbjct: 14 LQQQGAQVNSSDY----MKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNALINMYI 69
Query: 70 KCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMG 129
+CG I +A+ ++ S ++ + S+ +M++G
Sbjct: 70 QCGSIEEARQVWKKLSYME-----------------------------RTVHSWNAMVVG 100
Query: 130 FAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGF 189
+ Q +AL++ R M+ G+ P+ T+ S +SS G + R +H ++ +
Sbjct: 101 YIQYGYIEKALKLLRQMQQHGLAPDRTTIMSFLSSCKSPGALEWGREIHFQAMQAGLLFD 160
Query: 190 VIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPS 249
V ++ +LNMY C S+ EAR +FD+M+++++VSW + + G+A G E A E+F+++
Sbjct: 161 VKVANCILNMYAKCGSIEEAREVFDKMEKKSVVSWTITIGGYADCGRSETAFEIFQKMEQ 220
Query: 250 KDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQI 309
+G+ PN + + +++A A G +
Sbjct: 221 -------------------------------EGVVPNRITYISVLNAFSSPAALKWGKAV 249
Query: 310 HSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMI 369
HS I+ AG + + ++ YA CG R FE + + +WN +I G G
Sbjct: 250 HSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGYW 309
Query: 370 EDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAI 429
E+A +++N MQ+ GV PN+IT V + A
Sbjct: 310 EEASEVYNQMQRE-------------------------------GVMPNKITYVILLNAC 338
Query: 430 ASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSP 489
+S L G+ H V T + + A+I MY++CGSI A VF + + V
Sbjct: 339 VNSAALHWGKEIHSRVAKAGFTSDIGVQNALISMYSRCGSIKDARLVFDKMVRK--DVIS 396
Query: 490 WNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMK 549
W A+I GLA G L +Y ++++ ++ N +T+ +L+ C ++ G R + +
Sbjct: 397 WTAMIGGLAKSGFGAEALTVYQEMQQAGVEPNRVTYTSILNACSSPAALEWGRRIHQQV- 455
Query: 550 SVYNVEPDL---KHYG-CMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGN 605
VE L H G +V++ G ++DA +V M ++ D+V + ++ H
Sbjct: 456 ----VEAGLATDAHVGNTLVNMYSMCGSVKDARQVFDRM-IQRDIVAYNAMIGGYAAH-- 508
Query: 606 VEVGERAAKSLAGLQPSH-GPSRVLLSNIY---ADAGRWEDAFSIRKEMRDCG 654
+G+ A K LQ P +V N+ A++G E A I +R G
Sbjct: 509 -NLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAREIHTLVRKGG 560
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 130/532 (24%), Positives = 237/532 (44%), Gaps = 102/532 (19%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
++ V L C A+ G++IHS + K+G S+ +QN+LI++Y++CG I A+ +FD
Sbjct: 328 KITYVILLNACVNSAALHWGKEIHSRVAKAGFTSDIGVQNALISMYSRCGSIKDARLVFD 387
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+R D +S+T+MI G A++ EAL V
Sbjct: 388 K---------------MVRKD----------------VISWTAMIGGLAKSGFGAEALTV 416
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
+++M+ GV PN VT S++++ + R +H V++ + + L+NMY +
Sbjct: 417 YQEMQQAGVEPNRVTYTSILNACSSPAALEWGRRIHQQVVEAGLATDAHVGNTLVNMYSM 476
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
C S+ +AR +FD M +R+IV++N M+ G+A L + A +LF+R+
Sbjct: 477 CGSVKDARQVFDRMIQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQE------------- 523
Query: 263 LQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD 322
+G+ P+ V +++++AC + + +IH+++ K GF
Sbjct: 524 ------------------EGLKPDKVTYINMLNACANSGSLEWAREIHTLVRKGGFFSDT 565
Query: 323 FIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKR 382
+ ++ YA CG + A + FE K ++ SWNA+I G ++G +DA QLF M+
Sbjct: 566 SVGNALVSTYAKCGSFSDASIVFEKMTKRNVISWNAIIGGSAQHGRGQDALQLFERMKME 625
Query: 383 DVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAH 442
GVKP+ +T VS+ A + +G L+EGR
Sbjct: 626 -------------------------------GVKPDIVTFVSLLSACSHAGLLEEGR--- 651
Query: 443 EYVLNNS----ITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLA 498
Y + S I ++D+ + G ++ A E + W A++
Sbjct: 652 RYFCSMSQDFAIIPTIEHYGCMVDLLGRAGQLDEA-EALIKTMPFQANTRIWGALLGACR 710
Query: 499 MHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKS 550
+HG+ + + K ++ N++ ++ + AG+ D + K M+
Sbjct: 711 IHGNVPVAERAAESSLKLDLD-NAVVYVALSHMYAAAGMWDSAAKLRKLMEQ 761
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 110/429 (25%), Positives = 194/429 (45%), Gaps = 44/429 (10%)
Query: 180 LVIKLMIDGFVIISTNLLNMYCVC---SSLVEARSLFDEMKERNIV----SWNVMLNGFA 232
+V L G + S++ + M C LV R + + + V + N ++N +
Sbjct: 10 VVQYLQQQGAQVNSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNALINMYI 69
Query: 233 KAGLVELARELFERIP--SKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMI 290
+ G +E AR++++++ + V SW M+ GY+Q + +AL + R M G+AP+ I
Sbjct: 70 QCGSIEEARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDRTTI 129
Query: 291 VDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIK 350
+ +S+C A G +IH ++AG + I++ YA CG I AR F+ K
Sbjct: 130 MSFLSSCKSPGALEWGREIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEAREVFDKMEK 189
Query: 351 DHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGM 410
+ SW I G+ G E A ++F M++
Sbjct: 190 KSVVSWTITIGGYADCGRSETAFEIFQKMEQE---------------------------- 221
Query: 411 VDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSI 470
GV PN IT +SV A +S LK G+ H +LN + + A++ MYAKCGS
Sbjct: 222 ---GVVPNRITYISVLNAFSSPAALKWGKAVHSRILNAGHESDTAVGTALVKMYAKCGSY 278
Query: 471 NTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLS 530
+VF + +R + WN +I GLA G ++Y+ +++ + N IT++ +L+
Sbjct: 279 KDCRQVFEKLVNR--DLIAWNTMIGGLAEGGYWEEASEVYNQMQREGVMPNKITYVILLN 336
Query: 531 TCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADV 590
C ++ + G+ S + D+ ++ + R G ++DA V M ++ DV
Sbjct: 337 ACVNSAALHWGKE-IHSRVAKAGFTSDIGVQNALISMYSRCGSIKDARLVFDKM-VRKDV 394
Query: 591 VIWGTLLAA 599
+ W ++
Sbjct: 395 ISWTAMIGG 403
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 100/222 (45%), Gaps = 38/222 (17%)
Query: 435 LKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAII 494
L GR H++++ + + A+I+MY +CGSI A +V+ + +V WNA++
Sbjct: 39 LVAGRQVHQHIIQHRTVPDQYTVNALINMYIQCGSIEEARQVWKKLSYMERTVHSWNAMV 98
Query: 495 CGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLG-ERYFKSMKSVYN 553
G +G LK+ +++ + + T + LS+C G ++ G E +F++M++
Sbjct: 99 VGYIQYGYIEKALKLLRQMQQHGLAPDRTTIMSFLSSCKSPGALEWGREIHFQAMQA--G 156
Query: 554 VEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAA 613
+ D+K C++++ + G +E+A EV M K+ VV W +
Sbjct: 157 LLFDVKVANCILNMYAKCGSIEEAREVFDKMEKKS-VVSWTITIGG-------------- 201
Query: 614 KSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGM 655
YAD GR E AF I ++M G+
Sbjct: 202 --------------------YADCGRSETAFEIFQKMEQEGV 223
>gi|147856457|emb|CAN80769.1| hypothetical protein VITISV_013866 [Vitis vinifera]
Length = 761
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 210/593 (35%), Positives = 320/593 (53%), Gaps = 55/593 (9%)
Query: 111 VFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGG 170
+F+ T +TSM+ ++ + + +F M+ GV P+ +I S+ + GG
Sbjct: 56 LFNSTLNPNVFVFTSMLRFYSHLQDHAKVVLMFEHMQGCGVRPDAFVYPILIKSAGN-GG 114
Query: 171 IWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDE--------------- 215
I H V+KL + +++MY + AR +FDE
Sbjct: 115 I----GFHAHVLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMV 170
Query: 216 ------------------MKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGT 257
M ERN+++W M+ G+AK +E AR F+ +P + VVSW
Sbjct: 171 SGYWKWESEGQAQWLFDVMPERNVITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNA 230
Query: 258 MIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGR----AMAFGEGLQIHSII 313
M+ GY Q E L ++ M+ GI P++ V +ISAC +A +H
Sbjct: 231 MLSGYAQNGLAEEVLRLFDEMVNAGIEPDETTWVTVISACSSRGDPCLAASLVRTLHQKQ 290
Query: 314 VKAGFDCYDFIQATIIHFYAACGRINLARLQF-ELGIKDHIASWNALIAGFIRNGMIEDA 372
++ +C F++ ++ YA CG I AR F ELG + +WNA+I+ + R G ++ A
Sbjct: 291 IQ--LNC--FVRTALLDMYAKCGSIGAARRIFDELGAYRNSVTWNAMISAYTRVGNLDSA 346
Query: 373 RQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAG-VKPNEITMVSVFCAIAS 431
R+LFN M R+V +W++MI+GYAQN Q MA+ELF M+ A + P+E+TMVSV A
Sbjct: 347 RELFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGH 406
Query: 432 SGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWN 491
G L+ G W ++ N I L+ + A+I MY++CGS+ A VF + R V +N
Sbjct: 407 LGALELGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATR--DVVSYN 464
Query: 492 AIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSV 551
+I G A HG + + S +++ I+ + +TFIGVL+ C HAGL++ G + F+S+K
Sbjct: 465 TLISGFAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVFESIK-- 522
Query: 552 YNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGER 611
+P + HY CMVDLLGR G+LEDA+ + MPM+ ++G+LL ASRIH VE+GE
Sbjct: 523 ---DPAIDHYACMVDLLGRVGELEDAKRTMERMPMEPHAGVYGSLLNASRIHKQVELGEL 579
Query: 612 AAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
AA L L+P + + +LLSNIYA AGRW+D IR+ M+ G+K+ G+S V
Sbjct: 580 AANKLFELEPDNSGNFILLSNIYASAGRWKDVERIREAMKKGGVKKTTGWSWV 632
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 137/473 (28%), Positives = 231/473 (48%), Gaps = 82/473 (17%)
Query: 42 GQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP------------ 89
G H+ + K G S+ F++N++I++YA+ G I A+ +FD +
Sbjct: 114 GIGFHAHVLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMVSGY 173
Query: 90 ---------------------VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIM 128
+ M++GY + L AR FD P + VS+ +M+
Sbjct: 174 WKWESEGQAQWLFDVMPERNVITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNAMLS 233
Query: 129 GFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWEC------RMLHGLVI 182
G+AQN E L +F +M G+ P+E T +VIS+ G C R LH I
Sbjct: 234 GYAQNGLAEEVLRLFDEMVNAGIEPDETTWVTVISACSSRGD--PCLAASLVRTLHQKQI 291
Query: 183 KLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKE-RNIVSWNVMLNGFAKAGLVELAR 241
+L + T LL+MY C S+ AR +FDE+ RN V+WN M++ + + G ++ AR
Sbjct: 292 QLN----CFVRTALLDMYAKCGSIGAARRIFDELGAYRNSVTWNAMISAYTRVGNLDSAR 347
Query: 242 ELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAML-CDGIAPNDVMIVDLISACGRA 300
ELF +P ++VV+W +MI GY Q + + A+ +++ M+ + P++V +V +ISACG
Sbjct: 348 ELFNTMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHL 407
Query: 301 MAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALI 360
A L++ + +V+ L Q +L I H NA+I
Sbjct: 408 GA----LELGNWVVRF-----------------------LTENQIKLSISGH----NAMI 436
Query: 361 AGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEI 420
+ R G +EDA+++F M RDV S++ +ISG+A + A+ L M + G++P+ +
Sbjct: 437 FMYSRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPDRV 496
Query: 421 TMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTA 473
T + V A + +G L+EGR E + + +I + A ++D+ + G + A
Sbjct: 497 TFIGVLTACSHAGLLEEGRKVFESIKDPAI----DHYACMVDLLGRVGELEDA 545
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 65/156 (41%), Gaps = 35/156 (22%)
Query: 93 NIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVI 152
N MI Y R + DA+ VF + + VSY ++I GFA + EA+ + M+ G+
Sbjct: 433 NAMIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIE 492
Query: 153 PNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSL 212
P+ VT V+++ H G L E R +
Sbjct: 493 PDRVTFIGVLTACSHAG-----------------------------------LLEEGRKV 517
Query: 213 FDEMKERNIVSWNVMLNGFAKAGLVELARELFERIP 248
F+ +K+ I + M++ + G +E A+ ER+P
Sbjct: 518 FESIKDPAIDHYACMVDLLGRVGELEDAKRTMERMP 553
>gi|255594521|ref|XP_002536106.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223520840|gb|EEF26277.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 519
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 184/511 (36%), Positives = 297/511 (58%), Gaps = 3/511 (0%)
Query: 93 NIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVI 152
N +++GY + L A VFD+ P + VS+T+MI+G+ Q + A+++F M V+
Sbjct: 10 NTILTGYAKLGTLAKAHSVFDEIPDRDSVSWTTMIVGYNQMGRFESAIKMFVAMMKDKVL 69
Query: 153 PNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSL 212
P + T+ +V +S LG + + +H VIKL + G V ++ +LLNMY V A+ +
Sbjct: 70 PTQFTVTNVFASCAALGALDIGKKIHSFVIKLGLSGCVPVANSLLNMYAKAGDSVMAKIV 129
Query: 213 FDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEAL 272
FD M+ R+I SWN+M++ G +LA FE++ +DVV+W +MI GY Q EAL
Sbjct: 130 FDRMRLRSISSWNIMISLHMHGGRADLALAQFEQMSERDVVTWNSMITGYSQHGFDKEAL 189
Query: 273 TMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFY 332
++ ML D + P+ + ++SAC G QIHS I++ FD +Q +I Y
Sbjct: 190 ELFSRMLEDSLKPDRFTLASILSACANIENLNLGKQIHSYIIRTEFDISGVVQNALISMY 249
Query: 333 AACGRINLARLQFEL-GIKD-HIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAM 390
A G + +A+ E GI D ++ ++ AL+ G+++ G I AR +F++++ DV +W+AM
Sbjct: 250 AKTGGVEIAQSIVEQSGISDLNVIAFTALLDGYVKLGNITPARHIFDSLKDSDVVAWTAM 309
Query: 391 ISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSI 450
I GY QN + A+ELF M G +PN T+ ++ ++ +L G+ H + +
Sbjct: 310 IVGYVQNGLNDDAMELFRIMAKEGPRPNSFTLAAMLSVSSNVASLNHGKQIHASAIRSGE 369
Query: 451 TLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIY 510
L+ ++ A+I MYAK GSI A +VF I+ +VS W ++I L HG +++++
Sbjct: 370 NLSVSVGNALITMYAKAGSITDAQQVFNLIQRNKDTVS-WTSMIIALGQHGLGQESIELF 428
Query: 511 SDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGR 570
+ IK + IT++GVLS C H GLV+ G YF M S++ +EP L HY CM+DL GR
Sbjct: 429 EKMLALGIKPDHITYVGVLSACTHVGLVEQGRGYFNLMTSIHKIEPTLSHYACMIDLFGR 488
Query: 571 AGQLEDAEEVIRSMPMKADVVIWGTLLAASR 601
AG L++A I +MP++ DV+ WG+LL++ +
Sbjct: 489 AGLLQEAFSFIENMPIEPDVIAWGSLLSSCK 519
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 123/442 (27%), Positives = 215/442 (48%), Gaps = 36/442 (8%)
Query: 216 MKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMY 275
M + SWN +L G+AK G + A +F+ IP +D VSW TMI GY Q+ R A+ M+
Sbjct: 1 MPVKTTFSWNTILTGYAKLGTLAKAHSVFDEIPDRDSVSWTTMIVGYNQMGRFESAIKMF 60
Query: 276 RAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAAC 335
AM+ D + P + ++ ++C A G +IHS ++K G + ++++ YA
Sbjct: 61 VAMMKDKVLPTQFTVTNVFASCAALGALDIGKKIHSFVIKLGLSGCVPVANSLLNMYAKA 120
Query: 336 GRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYA 395
G +A++ F+ I+SWN +I+ + G + A F M +RDV +W++MI+GY+
Sbjct: 121 GDSVMAKIVFDRMRLRSISSWNIMISLHMHGGRADLALAQFEQMSERDVVTWNSMITGYS 180
Query: 396 QNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDN 455
Q+ ALELF M++ +KP+ T+ S+ A A+ L G+ H Y++ ++
Sbjct: 181 QHGFDKEALELFSRMLEDSLKPDRFTLASILSACANIENLNLGKQIHSYIIRTEFDISGV 240
Query: 456 LSAAIIDMYAKCGSINTAFEVF-----------------------------YHIRD--RT 484
+ A+I MYAK G + A + HI D +
Sbjct: 241 VQNALISMYAKTGGVEIAQSIVEQSGISDLNVIAFTALLDGYVKLGNITPARHIFDSLKD 300
Query: 485 TSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERY 544
+ V W A+I G +G + ++++ + K + NS T +LS + ++ G++
Sbjct: 301 SDVVAWTAMIVGYVQNGLNDDAMELFRIMAKEGPRPNSFTLAAMLSVSSNVASLNHGKQI 360
Query: 545 FKS-MKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIH 603
S ++S N+ + + ++ + +AG + DA++V + D V W +++ A H
Sbjct: 361 HASAIRSGENLSVSVGN--ALITMYAKAGSITDAQQVFNLIQRNKDTVSWTSMIIALGQH 418
Query: 604 G-NVEVGERAAKSLA-GLQPSH 623
G E E K LA G++P H
Sbjct: 419 GLGQESIELFEKMLALGIKPDH 440
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 125/457 (27%), Positives = 229/457 (50%), Gaps = 37/457 (8%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
+ + + C+A A+ G++IHS + K GL + NSL+N+YAK G AK +FD
Sbjct: 72 QFTVTNVFASCAALGALDIGKKIHSFVIKLGLSGCVPVANSLLNMYAKAGDSVMAKIVFD 131
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+ NIMIS ++ R + A F++ + V++ SMI G++Q+ +EALE+
Sbjct: 132 RMRLRSISSWNIMISLHMHGGRADLALAQFEQMSERDVVTWNSMITGYSQHGFDKEALEL 191
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
F M + P+ TLAS++S+ ++ + + +H +I+ D ++ L++MY
Sbjct: 192 FSRMLEDSLKPDRFTLASILSACANIENLNLGKQIHSYIIRTEFDISGVVQNALISMYAK 251
Query: 203 CSSLVEARSLFDE--MKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMID 260
+ A+S+ ++ + + N++++ +L+G+ K G + AR +F+ + DVV+W MI
Sbjct: 252 TGGVEIAQSIVEQSGISDLNVIAFTALLDGYVKLGNITPARHIFDSLKDSDVVAWTAMIV 311
Query: 261 GYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDC 320
GY+Q +A+ ++R M +G PN + ++S + G QIH+ +++G +
Sbjct: 312 GYVQNGLNDDAMELFRIMAKEGPRPNSFTLAAMLSVSSNVASLNHGKQIHASAIRSGENL 371
Query: 321 YDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ 380
+ +I YA G I DA+Q+FN +Q
Sbjct: 372 SVSVGNALITMYAKAGSIT-------------------------------DAQQVFNLIQ 400
Query: 381 K-RDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGR 439
+ +D SW++MI Q+ ++ELF M+ G+KP+ IT V V A G +++GR
Sbjct: 401 RNKDTVSWTSMIIALGQHGLGQESIELFEKMLALGIKPDHITYVGVLSACTHVGLVEQGR 460
Query: 440 WAHEYVLNNSITLNDNLS--AAIIDMYAKCGSINTAF 474
+ ++ + + LS A +ID++ + G + AF
Sbjct: 461 -GYFNLMTSIHKIEPTLSHYACMIDLFGRAGLLQEAF 496
>gi|225427963|ref|XP_002277549.1| PREDICTED: pentatricopeptide repeat-containing protein At2g21090
[Vitis vinifera]
Length = 612
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 197/570 (34%), Positives = 310/570 (54%), Gaps = 21/570 (3%)
Query: 93 NIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVI 152
N+ S + N R R + +K C + + EA+ ++ G+
Sbjct: 8 NLNFSPFRTNPRKPRRRPCLVEAIVKLC-----------KKNKLNEAVSSLENLARRGLR 56
Query: 153 PNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGF----VIISTNLLNMYCVCSSLVE 208
+ TLAS++ + E + +H + L + G +S +L+NMY C VE
Sbjct: 57 LDSRTLASLLQHCADSRALREGKRVH---LHLKLTGLKRPGTFLSNHLINMYAKCGKEVE 113
Query: 209 ARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERL 268
AR +FD+M RN+ SWN ML+G+AK G+++ AR+LF+++P KDVVSW TM+ + Q
Sbjct: 114 ARKVFDKMSARNLYSWNNMLSGYAKLGMIKPARKLFDKMPEKDVVSWNTMVIAHAQCGYW 173
Query: 269 SEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATI 328
EAL Y GI N +++ C + G Q+H I+ AGF + +++
Sbjct: 174 DEALRFYSEFRQLGIQCNGFSFAGVLTVCVKLKEVGLTRQVHGQILVAGFLSNVVLSSSV 233
Query: 329 IHFYAACGRINLARLQF-ELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSW 387
+ Y CG + AR F E+ +D +A W +++G+ + G ++ A +LF M +++ SW
Sbjct: 234 LDAYVKCGLMGDARKLFDEMSARDVLA-WTTMVSGYAKWGDMKSANELFVEMPEKNPVSW 292
Query: 388 SAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLN 447
+A+ISGYA+N + ALELF M+ V+P++ T S CA AS +LK G+ H Y+L
Sbjct: 293 TALISGYARNGMGHKALELFTKMMLFHVRPDQFTFSSCLCACASIASLKHGKQIHAYLLR 352
Query: 448 NSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTL 507
+ N + +A+IDMY+KCGS+ +VF + V WN II LA HG +
Sbjct: 353 INFQPNTIVVSALIDMYSKCGSLGIGRKVF-DLMGNKLDVVLWNTIISALAQHGCGEEAI 411
Query: 508 KIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDL 567
++ D+ + K + ITF+ +L+ C H+GLV G +F+SM Y + P +HY C++DL
Sbjct: 412 QMLDDMVRSGAKPDKITFVVILNACSHSGLVQQGLNFFESMSCDYGIVPSQEHYACLIDL 471
Query: 568 LGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSR 627
LGRAG E+ + + MP K D +W LL RIHG++E+G +AA+ L L+P +
Sbjct: 472 LGRAGCFEEVMDQLEKMPYKPDDRVWNALLGVCRIHGHIELGRKAAERLIELEPQSSTAY 531
Query: 628 VLLSNIYADAGRWEDAFSIRKEMRDCGMKR 657
VLLS+IYA GRWE +R+ M + +K+
Sbjct: 532 VLLSSIYAVLGRWESVQKVRQLMNERQVKK 561
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 143/494 (28%), Positives = 249/494 (50%), Gaps = 49/494 (9%)
Query: 25 ALVSALRYCSAHIAVSQGQQIHSLIFKSGLE-SNTFIQNSLINLYAKCGLISQAKSMFDS 83
L S L++C+ A+ +G+++H + +GL+ TF+ N LIN+YAKCG +A+ +FD
Sbjct: 61 TLASLLQHCADSRALREGKRVHLHLKLTGLKRPGTFLSNHLINMYAKCGKEVEARKVFDK 120
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
S + + N M+SGY + + AR++FDK P K VS+ +M++ AQ W EAL +
Sbjct: 121 MSARNLYSWNNMLSGYAKLGMIKPARKLFDKMPEKDVVSWNTMVIAHAQCGYWDEALRFY 180
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGF---VIISTNLLNMY 200
+ R LG+ N + A V++ V L + R +HG ++++ GF V++S+++L+ Y
Sbjct: 181 SEFRQLGIQCNGFSFAGVLTVCVKLKEVGLTRQVHG---QILVAGFLSNVVLSSSVLDAY 237
Query: 201 CVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMID 260
C + +AR LFDEM R++++W M++G+AK G ++ A ELF +P K+ VSW +I
Sbjct: 238 VKCGLMGDARKLFDEMSARDVLAWTTMVSGYAKWGDMKSANELFVEMPEKNPVSWTALIS 297
Query: 261 GYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDC 320
GY + +AL ++ M+ + P+ + AC + G QIH+ +++ F
Sbjct: 298 GYARNGMGHKALELFTKMMLFHVRPDQFTFSSCLCACASIASLKHGKQIHAYLLRINFQP 357
Query: 321 YDFIQATIIHFYAACGRINLARLQFEL-GIKDHIASWNALIAGFIRNGMIEDARQLFNNM 379
+ + +I Y+ CG + + R F+L G K + WN +I+ ++G E+A Q+ ++
Sbjct: 358 NTIVVSALIDMYSKCGSLGIGRKVFDLMGNKLDVVLWNTIISALAQHGCGEEAIQMLDD- 416
Query: 380 QKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG- 438
MV +G KP++IT V + A + SG +++G
Sbjct: 417 ------------------------------MVRSGAKPDKITFVVILNACSHSGLVQQGL 446
Query: 439 RWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVF----YHIRDRTTSVSPWNAII 494
+ + I + A +ID+ + G + Y DR WNA++
Sbjct: 447 NFFESMSCDYGIVPSQEHYACLIDLLGRAGCFEEVMDQLEKMPYKPDDRV-----WNALL 501
Query: 495 CGLAMHGDANLTLK 508
+HG L K
Sbjct: 502 GVCRIHGHIELGRK 515
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 111/428 (25%), Positives = 201/428 (46%), Gaps = 25/428 (5%)
Query: 6 FHSVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLI 65
F+S F ++ +Q + + A V L C V +Q+H I +G SN + +S++
Sbjct: 179 FYSEF--RQLGIQCNGFSFAGV--LTVCVKLKEVGLTRQVHGQILVAGFLSNVVLSSSVL 234
Query: 66 NLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTS 125
+ Y KCGL+ A+ +FD S D +A M+SGY + + A E+F + P K VS+T+
Sbjct: 235 DAYVKCGLMGDARKLFDEMSARDVLAWTTMVSGYAKWGDMKSANELFVEMPEKNPVSWTA 294
Query: 126 MIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLM 185
+I G+A+N +ALE+F M + V P++ T +S + + + + + +H ++++
Sbjct: 295 LISGYARNGMGHKALELFTKMMLFHVRPDQFTFSSCLCACASIASLKHGKQIHAYLLRIN 354
Query: 186 IDGFVIISTNLLNMYCVCSSLVEARSLFDEMKER-NIVSWNVMLNGFAKAGLVELARELF 244
I+ + L++MY C SL R +FD M + ++V WN +++ A+ G E A ++
Sbjct: 355 FQPNTIVVSALIDMYSKCGSLGIGRKVFDLMGNKLDVVLWNTIISALAQHGCGEEAIQML 414
Query: 245 ERI----PSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCD-GIAPNDVMIVDLISACGR 299
+ + D +++ +++ + + L + +M CD GI P+ LI GR
Sbjct: 415 DDMVRSGAKPDKITFVVILNACSHSGLVQQGLNFFESMSCDYGIVPSQEHYACLIDLLGR 474
Query: 300 AMAFGEGL-QIHSIIVKAGFDCYD-FIQATIIHFYAACGRINLARL-QFELGIKDHIASW 356
A F E + Q+ + K ++ + IH + GR RL + E
Sbjct: 475 AGCFEEVMDQLEKMPYKPDDRVWNALLGVCRIHGHIELGRKAAERLIELEPQSSTAYVLL 534
Query: 357 NALIAGFIRNGMIEDARQLFNNMQ------------KRDVYSWSAMISGYAQNEQPNMAL 404
+++ A R ++ RQL N Q + V+S+S S + EQ L
Sbjct: 535 SSIYAVLGRWESVQKVRQLMNERQVKKERAISWLEIENKVHSFSVSDSSHPLKEQIYSVL 594
Query: 405 ELFHGMVD 412
E G ++
Sbjct: 595 EQLAGQME 602
>gi|224106277|ref|XP_002314110.1| predicted protein [Populus trichocarpa]
gi|222850518|gb|EEE88065.1| predicted protein [Populus trichocarpa]
Length = 738
Score = 349 bits (896), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 204/624 (32%), Positives = 319/624 (51%), Gaps = 64/624 (10%)
Query: 43 QQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRN 102
+Q+H+ + ++GL F S L+ C L S S+LD AC
Sbjct: 47 KQLHAHMLRTGL---FFDPPSATKLFTACAL--------SSPSSLD-YAC---------- 84
Query: 103 DRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDM-RILGVIPNEVTLASV 161
+VFD+ P ++ ++I FA + + L VF M PN T V
Sbjct: 85 -------KVFDQIPRPNLYTWNTLIRAFASSPKPIQGLLVFIQMLHESQRFPNSYTFPFV 137
Query: 162 ISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNI 221
I ++ + + + +HG+V+K + IS +L++ Y L A +F ++ E++I
Sbjct: 138 IKAATEVSSLLAGQAIHGMVMKASFGSDLFISNSLIHFYSSLGDLDSAYLVFSKIVEKDI 197
Query: 222 VSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCD 281
VSWN M++GF + G E EAL +++ M +
Sbjct: 198 VSWNSMISGFVQGGSPE-------------------------------EALQLFKRMKME 226
Query: 282 GIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLA 341
PN V +V ++SAC + + G I + G D + ++ Y CG + A
Sbjct: 227 NARPNRVTMVGVLSACAKRIDLEFGRWACDYIERNGIDINLILSNAMLDMYVKCGSLEDA 286
Query: 342 RLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPN 401
R F+ + I SW +I G+ + G + AR++F+ M + D+ +W+A+IS Y QN +P
Sbjct: 287 RRLFDKMEEKDIVSWTTMIDGYAKVGDYDAARRVFDVMPREDITAWNALISSYQQNGKPK 346
Query: 402 MALELFHGM-VDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAI 460
AL +F + ++ KPNE+T+ S A A G + G W H Y+ I LN +++ ++
Sbjct: 347 EALAIFRELQLNKNTKPNEVTLASTLAACAQLGAMDLGGWIHVYIKKQGIKLNFHITTSL 406
Query: 461 IDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKL 520
IDMY+KCG + A EVFY + R V W+A+I GLAMHG + ++S +++ +K
Sbjct: 407 IDMYSKCGHLEKALEVFYSVERRDVFV--WSAMIAGLAMHGHGRAAIDLFSKMQETKVKP 464
Query: 521 NSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEV 580
N++TF +L C H+GLVD G +F M+ VY V P KHY CMVD+LGRAG LE+A E+
Sbjct: 465 NAVTFTNLLCACSHSGLVDEGRLFFNQMRPVYGVVPGSKHYACMVDILGRAGCLEEAVEL 524
Query: 581 IRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRW 640
I MP+ +WG LL A RI+GNVE+ E A L ++ + VLLSNIYA AG+W
Sbjct: 525 IEKMPIVPSASVWGALLGACRIYGNVELAEMACSRLLETDSNNHGAYVLLSNIYAKAGKW 584
Query: 641 EDAFSIRKEMRDCGMKRLPGFSGV 664
+ +R+ M+ G+++ PG S +
Sbjct: 585 DCVSRLRQHMKVSGLEKEPGCSSI 608
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 132/470 (28%), Positives = 212/470 (45%), Gaps = 73/470 (15%)
Query: 42 GQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIR 101
GQ IH ++ K+ S+ FI NSLI+ Y+ G + A +F D V+ N MISG
Sbjct: 150 GQAIHGMVMKASFGSDLFISNSLIHFYSSLGDLDSAYLVFSKIVEKDIVSWNSMISG--- 206
Query: 102 NDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASV 161
F Q EAL++F+ M++ PN VT+ V
Sbjct: 207 ----------------------------FVQGGSPEEALQLFKRMKMENARPNRVTMVGV 238
Query: 162 ISSSVHL----GGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMK 217
+S+ G W C + + ID +I+S +L+MY C SL +AR LFD+M+
Sbjct: 239 LSACAKRIDLEFGRWACDYIE----RNGIDINLILSNAMLDMYVKCGSLEDARRLFDKME 294
Query: 218 ERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRA 277
E++IVSW M++G+AK G + AR +F+ +P +D+ +W +I Y Q + EAL ++R
Sbjct: 295 EKDIVSWTTMIDGYAKVGDYDAARRVFDVMPREDITAWNALISSYQQNGKPKEALAIFRE 354
Query: 278 M-LCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACG 336
+ L PN+V + ++AC + A G IH I K G I ++I Y+ CG
Sbjct: 355 LQLNKNTKPNEVTLASTLAACAQLGAMDLGGWIHVYIKKQGIKLNFHITTSLIDMYSKCG 414
Query: 337 RINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQ 396
+ A F + + W+A+IAG +G A LF+ MQ
Sbjct: 415 HLEKALEVFYSVERRDVFVWSAMIAGLAMHGHGRAAIDLFSKMQ---------------- 458
Query: 397 NEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGR-WAHEYVLNNSITLNDN 455
+ VKPN +T ++ CA + SG + EGR + ++ +
Sbjct: 459 ---------------ETKVKPNAVTFTNLLCACSHSGLVDEGRLFFNQMRPVYGVVPGSK 503
Query: 456 LSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANL 505
A ++D+ + G + A E+ + S S W A++ ++G+ L
Sbjct: 504 HYACMVDILGRAGCLEEAVELIEKM-PIVPSASVWGALLGACRIYGNVEL 552
Score = 119 bits (297), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 143/292 (48%), Gaps = 6/292 (2%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+ +V L C+ I + G+ I ++G++ N + N+++++Y KCG + A+ +FD
Sbjct: 233 VTMVGVLSACAKRIDLEFGRWACDYIERNGIDINLILSNAMLDMYVKCGSLEDARRLFDK 292
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
D V+ MI GY + + AR VFD P + ++ ++I + QN +EAL +F
Sbjct: 293 MEEKDIVSWTTMIDGYAKVGDYDAARRVFDVMPREDITAWNALISSYQQNGKPKEALAIF 352
Query: 144 RDMRI-LGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
R++++ PNEVTLAS +++ LG + +H + K I I+T+L++MY
Sbjct: 353 RELQLNKNTKPNEVTLASTLAACAQLGAMDLGGWIHVYIKKQGIKLNFHITTSLIDMYSK 412
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDV----VSWGTM 258
C L +A +F ++ R++ W+ M+ G A G A +LF ++ V V++ +
Sbjct: 413 CGHLEKALEVFYSVERRDVFVWSAMIAGLAMHGHGRAAIDLFSKMQETKVKPNAVTFTNL 472
Query: 259 IDGYLQVERLSEALTMYRAM-LCDGIAPNDVMIVDLISACGRAMAFGEGLQI 309
+ + E + M G+ P ++ GRA E +++
Sbjct: 473 LCACSHSGLVDEGRLFFNQMRPVYGVVPGSKHYACMVDILGRAGCLEEAVEL 524
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 104/258 (40%), Gaps = 72/258 (27%)
Query: 8 SVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINL 67
++F + N E+ L S L C+ A+ G IH I K G++ N I SLI++
Sbjct: 350 AIFRELQLNKNTKPNEVTLASTLAACAQLGAMDLGGWIHVYIKKQGIKLNFHITTSLIDM 409
Query: 68 YAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMI 127
Y+KCG + +A +F S + R+VF +++MI
Sbjct: 410 YSKCGHLEKALEVFYSV----------------------ERRDVF---------VWSAMI 438
Query: 128 MGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMID 187
G A + R A+++F M+ V PN VT +++ + H G ++D
Sbjct: 439 AGLAMHGHGRAAIDLFSKMQETKVKPNAVTFTNLLCACSHSG---------------LVD 483
Query: 188 GFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIV-----SWNVMLNGFAKAGLVELARE 242
E R F++M+ V + M++ +AG +E A E
Sbjct: 484 --------------------EGRLFFNQMRPVYGVVPGSKHYACMVDILGRAGCLEEAVE 523
Query: 243 LFERIPSKDVVS-WGTMI 259
L E++P S WG ++
Sbjct: 524 LIEKMPIVPSASVWGALL 541
>gi|225466196|ref|XP_002265420.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 537
Score = 349 bits (895), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 179/459 (38%), Positives = 271/459 (59%), Gaps = 6/459 (1%)
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYL 263
S L + +LFD I+S+ + + G + A LF +P + W TM+ +
Sbjct: 34 SHLTVSGTLFDPFAAGRIISFCAV----SAQGDISHAYLLFLSLPRRTSFIWNTMLRAFT 89
Query: 264 QVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDF 323
+ + L++Y+ ML G PN+ L+ AC + G+ +H+ V+ G++ YDF
Sbjct: 90 DKKEPATVLSLYKYMLSTGFLPNNYTFSFLLQACAQLSDLSFGILLHAQAVRLGWEAYDF 149
Query: 324 IQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRD 383
+Q ++H YA+C ++ AR F+ + + +W A+I G+ ++G + ARQLF+ M +++
Sbjct: 150 VQNGLLHLYASCNCMDSARRLFDGSVNRDVVTWTAVINGYAKSGQVVVARQLFDEMPEKN 209
Query: 384 VYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHE 443
SWSAMI+GYAQ ALELF+ M AG +PN +V A A G L +GRW H
Sbjct: 210 AVSWSAMITGYAQIGLFREALELFNDMQIAGFRPNHGAIVGALTACAFLGALDQGRWIHA 269
Query: 444 YVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDA 503
YV N + L+ L A+IDMYAKCG + TA VF + DR V + ++I GLA HG +
Sbjct: 270 YVDRNRMVLDRILGTALIDMYAKCGCVETACRVFDEMLDR--DVFAFTSLISGLANHGHS 327
Query: 504 NLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGC 563
+++++ ++ + N +TFI +LS C GLV+ G R FKSM ++Y +EP ++HYGC
Sbjct: 328 ATAIEMFTRMQNEGVCPNEVTFICLLSACSRVGLVEEGLRIFKSMTNIYGIEPVVQHYGC 387
Query: 564 MVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSH 623
+VDLLGRAG LEDA+ V+R MP++ D + G LL A R+HG+VE+G+ + LA H
Sbjct: 388 LVDLLGRAGMLEDAKRVVREMPLEPDSYVLGALLNACRVHGDVELGKETVECLAERSLDH 447
Query: 624 GPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
G VLLSN+YA A +WED +RK M + +K++PG S
Sbjct: 448 GGVHVLLSNMYASANQWEDVAKVRKGMEEKKVKKVPGCS 486
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 124/464 (26%), Positives = 212/464 (45%), Gaps = 44/464 (9%)
Query: 63 SLINLYAKCGLISQAKSMFDSCSTL-DPVACNIMIS--GYIRNDRLNDAREVFDKTPIKC 119
SL++ I Q +S TL DP A +IS ++ A +F P +
Sbjct: 18 SLLDQCVTMAHIKQIQSHLTVSGTLFDPFAAGRIISFCAVSAQGDISHAYLLFLSLPRRT 77
Query: 120 CVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHG 179
+ +M+ F L +++ M G +PN T + ++ + L + +LH
Sbjct: 78 SFIWNTMLRAFTDKKEPATVLSLYKYMLSTGFLPNNYTFSFLLQACAQLSDLSFGILLHA 137
Query: 180 LVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVEL 239
++L + + + LL++Y C+ + AR LFD R++V+W ++NG+AK+G V +
Sbjct: 138 QAVRLGWEAYDFVQNGLLHLYASCNCMDSARRLFDGSVNRDVVTWTAVINGYAKSGQVVV 197
Query: 240 ARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGR 299
AR+LF+ +P K+ VSW MI GY Q+ EAL ++ M G PN IV ++AC
Sbjct: 198 ARQLFDEMPEKNAVSWSAMITGYAQIGLFREALELFNDMQIAGFRPNHGAIVGALTACAF 257
Query: 300 AMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNAL 359
A +G IH+ Y R+ L R+ LG AL
Sbjct: 258 LGALDQGRWIHA--------------------YVDRNRMVLDRI---LG--------TAL 286
Query: 360 IAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNE 419
I + + G +E A ++F+ M RDV++++++ISG A + A+E+F M + GV PNE
Sbjct: 287 IDMYAKCGCVETACRVFDEMLDRDVFAFTSLISGLANHGHSATAIEMFTRMQNEGVCPNE 346
Query: 420 ITMVSVFCAIASSGTLKEGRWAHEYVLN-NSITLNDNLSAAIIDMYAKCGSINTAFEVFY 478
+T + + A + G ++EG + + N I ++D+ + G + A V
Sbjct: 347 VTFICLLSACSRVGLVEEGLRIFKSMTNIYGIEPVVQHYGCLVDLLGRAGMLEDAKRVV- 405
Query: 479 HIRDRTTSVSP----WNAIICGLAMHGDANLTLKIYSDLEKRNI 518
R + P A++ +HGD L + L +R++
Sbjct: 406 ----REMPLEPDSYVLGALLNACRVHGDVELGKETVECLAERSL 445
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 101/365 (27%), Positives = 174/365 (47%), Gaps = 62/365 (16%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
L+ C+ +S G +H+ + G E+ F+QN L++LYA C + A+ +FD D
Sbjct: 120 LQACAQLSDLSFGILLHAQAVRLGWEAYDFVQNGLLHLYASCNCMDSARRLFDGSVNRDV 179
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
V +I+GY ++ ++ AR++FD+ P K VS+++MI G+AQ +REALE+F DM+I
Sbjct: 180 VTWTAVINGYAKSGQVVVARQLFDEMPEKNAVSWSAMITGYAQIGLFREALELFNDMQIA 239
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
G PN + +++ LG + + R +H V + + I+ T L++MY C + A
Sbjct: 240 GFRPNHGAIVGALTACAFLGALDQGRWIHAYVDRNRMVLDRILGTALIDMYAKCGCVETA 299
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLS 269
+FDEM +R++ ++ +++G A G A E+F R+ +
Sbjct: 300 CRVFDEMLDRDVFAFTSLISGLANHGHSATAIEMFTRMQN-------------------- 339
Query: 270 EALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATII 329
+G+ PN+V + L+SAC R EGL+I F T I
Sbjct: 340 -----------EGVCPNEVTFICLLSACSRVGLVEEGLRI-------------FKSMTNI 375
Query: 330 HFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ-KRDVYSWS 388
+ GI+ + + L+ R GM+EDA+++ M + D Y
Sbjct: 376 Y-----------------GIEPVVQHYGCLVDLLGRAGMLEDAKRVVREMPLEPDSYVLG 418
Query: 389 AMISG 393
A+++
Sbjct: 419 ALLNA 423
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 107/237 (45%), Gaps = 33/237 (13%)
Query: 25 ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSC 84
A+V AL C+ A+ QG+ IH+ + ++ + + + +LI++YAKCG + A +FD
Sbjct: 247 AIVGALTACAFLGALDQGRWIHAYVDRNRMVLDRILGTALIDMYAKCGCVETACRVFD-- 304
Query: 85 STLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFR 144
LD R+VF ++TS+I G A + A+E+F
Sbjct: 305 EMLD--------------------RDVF---------AFTSLISGLANHGHSATAIEMFT 335
Query: 145 DMRILGVIPNEVTLASVISSSVHLGGIWE-CRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
M+ GV PNEVT ++S+ +G + E R+ + I+ V L+++
Sbjct: 336 RMQNEGVCPNEVTFICLLSACSRVGLVEEGLRIFKSMTNIYGIEPVVQHYGCLVDLLGRA 395
Query: 204 SSLVEARSLFDEMK-ERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMI 259
L +A+ + EM E + +LN G VEL +E E + + + G +
Sbjct: 396 GMLEDAKRVVREMPLEPDSYVLGALLNACRVHGDVELGKETVECLAERSLDHGGVHV 452
>gi|168003497|ref|XP_001754449.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694551|gb|EDQ80899.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 723
Score = 349 bits (895), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 205/634 (32%), Positives = 335/634 (52%), Gaps = 96/634 (15%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
L+ C+ ++ QG+++H+ I KSG++ N +++N+L+++YAKCG
Sbjct: 54 LQECARLRSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCG----------------- 96
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
L DAR VFD + VS+T+MI F + EA + + M++
Sbjct: 97 --------------SLTDARRVFDSIRDRNIVSWTAMIEAFVAGNKNLEAFKCYETMKLA 142
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
G P++VT S++++ + + + +H +++ ++ + T+L+ MY
Sbjct: 143 GCKPDKVTFVSLLNAFTNPELLQLGQKVHMEIVEAGLELEPRVGTSLVGMY--------- 193
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLS 269
AK G + AR +F+R+P K+VV+W +I GY Q ++
Sbjct: 194 ----------------------AKCGDISKARVIFDRLPEKNVVTWTLLIAGYAQQGQVD 231
Query: 270 EALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATII 329
AL + M +APN + ++ C A G ++H I+++G+
Sbjct: 232 VALELLETMQQAEVAPNKITFASILQGCTTPAALEHGKKVHRYIIQSGY----------- 280
Query: 330 HFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSA 389
GR EL + N+LI + + G +E+AR+LF+++ RDV +W+A
Sbjct: 281 ------GR--------ELWV------VNSLITMYCKCGGLEEARKLFSDLPHRDVVTWTA 320
Query: 390 MISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNS 449
M++GYAQ + A+ LF M G+KP+++T SV + +S L+EG+ H+ +++
Sbjct: 321 MVTGYAQLGFHDEAINLFRRMQQQGIKPDKMTFTSVLTSCSSPAFLQEGKRIHQQLVHAG 380
Query: 450 ITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGL-AMHGDANLTLK 508
L+ L +A++ MYAKCGS++ A VF + +R +V W AII G A HG L+
Sbjct: 381 YNLDVYLQSALVSMYAKCGSMDDASLVFNQMSER--NVVAWTAIITGCCAQHGRCREALE 438
Query: 509 IYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLL 568
+ ++K+ IK + +TF VLS C H GLV+ G ++F+SM Y ++P ++HY C VDLL
Sbjct: 439 YFDQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLL 498
Query: 569 GRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRV 628
GRAG LE+AE VI SMP +WG LL+A R+H +VE GERAA+++ L P + V
Sbjct: 499 GRAGHLEEAENVILSMPFIPGPSVWGALLSACRVHSDVERGERAAENVLKLDPDDDGAYV 558
Query: 629 LLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
LS+IYA AGR+EDA +R+ M + + PG S
Sbjct: 559 ALSSIYAAAGRYEDAEKVRQVMEKRDVVKEPGQS 592
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 114/464 (24%), Positives = 201/464 (43%), Gaps = 68/464 (14%)
Query: 137 REALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNL 196
+EAL + M + G ++ L + + R +H ++K I + L
Sbjct: 29 KEALGIMNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLENTL 88
Query: 197 LNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWG 256
L+MY C SL +AR +FD +++RNIVSW M+ F AG L
Sbjct: 89 LSMYAKCGSLTDARRVFDSIRDRNIVSWTAMIEAFV-AGNKNL----------------- 130
Query: 257 TMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKA 316
EA Y M G P+ V V L++A G ++H IV+A
Sbjct: 131 -------------EAFKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQLGQKVHMEIVEA 177
Query: 317 GFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLF 376
G + + +++ YA CG I+ AR+ F+ + ++ +W LIAG+ + G +
Sbjct: 178 GLELEPRVGTSLVGMYAKCGDISKARVIFDRLPEKNVVTWTLLIAGYAQQGQV------- 230
Query: 377 NNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLK 436
++ALEL M A V PN+IT S+ + L+
Sbjct: 231 ------------------------DVALELLETMQQAEVAPNKITFASILQGCTTPAALE 266
Query: 437 EGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICG 496
G+ H Y++ + + ++I MY KCG + A ++F + R V W A++ G
Sbjct: 267 HGKKVHRYIIQSGYGRELWVVNSLITMYCKCGGLEEARKLFSDLPHR--DVVTWTAMVTG 324
Query: 497 LAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSM-KSVYNVE 555
A G + + ++ ++++ IK + +TF VL++C + G+R + + + YN++
Sbjct: 325 YAQLGFHDEAINLFRRMQQQGIKPDKMTFTSVLTSCSSPAFLQEGKRIHQQLVHAGYNLD 384
Query: 556 PDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAA 599
L+ +V + + G ++DA V M + +VV W ++
Sbjct: 385 VYLQ--SALVSMYAKCGSMDDASLVFNQMSER-NVVAWTAIITG 425
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 156/335 (46%), Gaps = 39/335 (11%)
Query: 267 RLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQA 326
RL EAL + M+ G + L+ C R + +G ++H+ I+K+G +++
Sbjct: 27 RLKEALGIMNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLEN 86
Query: 327 TIIHFYAACGRINLARLQFELGIKD-HIASWNALIAGFIRNGMIEDARQLFNNMQKRDVY 385
T++ YA CG + AR F+ I+D +I SW A+I F+ N++
Sbjct: 87 TLLSMYAKCGSLTDARRVFD-SIRDRNIVSWTAMIEAFVAGN---------KNLE----- 131
Query: 386 SWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYV 445
A + + M AG KP+++T VS+ A + L+ G+ H +
Sbjct: 132 -----------------AFKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQLGQKVHMEI 174
Query: 446 LNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANL 505
+ + L + +++ MYAKCG I+ A +F + ++ +V W +I G A G ++
Sbjct: 175 VEAGLELEPRVGTSLVGMYAKCGDISKARVIFDRLPEK--NVVTWTLLIAGYAQQGQVDV 232
Query: 506 TLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKS-MKSVYNVEPDLKHYGCM 564
L++ +++ + N ITF +L C ++ G++ + ++S Y E L +
Sbjct: 233 ALELLETMQQAEVAPNKITFASILQGCTTPAALEHGKKVHRYIIQSGYGRE--LWVVNSL 290
Query: 565 VDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAA 599
+ + + G LE+A ++ +P + DVV W ++
Sbjct: 291 ITMYCKCGGLEEARKLFSDLPHR-DVVTWTAMVTG 324
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 89/371 (23%), Positives = 168/371 (45%), Gaps = 43/371 (11%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
++ S L+ C+ A+ G+++H I +SG ++ NSLI +Y KCG + +A+ +F
Sbjct: 249 KITFASILQGCTTPAALEHGKKVHRYIIQSGYGRELWVVNSLITMYCKCGGLEEARKLFS 308
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
D V++T+M+ G+AQ EA+ +
Sbjct: 309 DLPHRD-------------------------------VVTWTAMVTGYAQLGFHDEAINL 337
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
FR M+ G+ P+++T SV++S + E + +H ++ + V + + L++MY
Sbjct: 338 FRRMQQQGIKPDKMTFTSVLTSCSSPAFLQEGKRIHQQLVHAGYNLDVYLQSALVSMYAK 397
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNG-FAKAGLVELARELFERIPSK----DVVSWGT 257
C S+ +A +F++M ERN+V+W ++ G A+ G A E F+++ + D V++ +
Sbjct: 398 CGSMDDASLVFNQMSERNVVAWTAIITGCCAQHGRCREALEYFDQMKKQGIKPDKVTFTS 457
Query: 258 MIDGYLQVERLSEALTMYRAMLCD-GIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKA 316
++ V + E +R+M D GI P + GRA G + ++I+
Sbjct: 458 VLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRA---GHLEEAENVILSM 514
Query: 317 GFDCYDFIQATIIHFYAACGRINLARLQFELGIK---DHIASWNALIAGFIRNGMIEDAR 373
F + ++ + E +K D ++ AL + + G EDA
Sbjct: 515 PFIPGPSVWGALLSACRVHSDVERGERAAENVLKLDPDDDGAYVALSSIYAAAGRYEDAE 574
Query: 374 QLFNNMQKRDV 384
++ M+KRDV
Sbjct: 575 KVRQVMEKRDV 585
>gi|297740547|emb|CBI30729.3| unnamed protein product [Vitis vinifera]
Length = 506
Score = 349 bits (895), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 179/439 (40%), Positives = 258/439 (58%), Gaps = 5/439 (1%)
Query: 225 NVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIA 284
+V N A+A + A +F RIP+ + W T+I Y ALT++ ML +
Sbjct: 48 SVSTNSHAQA--IPYAHSIFSRIPNPNSYMWNTIIRAYANSPTPEAALTIFHQMLHASVL 105
Query: 285 PNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQ 344
P+ + +CG EG QIH ++K G FIQ T+IH YA+CG I AR
Sbjct: 106 PDKYTFTFALKSCGSFSGVEEGRQIHGHVLKTGLGDDLFIQNTLIHLYASCGCIEDARHL 165
Query: 345 FELGIKDHIASWNALIAGFIRNGMIEDA-RQLFNNMQKRDVYSWSAMISGYAQNEQPNMA 403
+ ++ + SWNAL++ + G++E A R++F ++V SW+AMI+GY+ + +
Sbjct: 166 LDRMLERDVVSWNALLSAYAERGLMELASRRVFGETPVKNVVSWNAMITGYSHAGRFSEV 225
Query: 404 LELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDM 463
L LF M AGVKP+ T+VSV A A G L +G W H Y+ N I+++ ++ A++DM
Sbjct: 226 LVLFEDMQHAGVKPDNCTLVSVLSACAHVGALSQGEWVHAYIDKNGISIDGFVATALVDM 285
Query: 464 YAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSI 523
Y+KCGSI A EVF + +S WN+II GL+ HG L+I+S++ K N +
Sbjct: 286 YSKCGSIEKALEVFNSCLRK--DISTWNSIISGLSTHGSGQHALQIFSEMLVEGFKPNEV 343
Query: 524 TFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRS 583
TF+ VLS C AGL+D G F M V+ ++P ++HYGCMVDLLGR G LE+AEE+++
Sbjct: 344 TFVCVLSACSRAGLLDEGREMFNLMVHVHGIQPTIEHYGCMVDLLGRVGLLEEAEELVQK 403
Query: 584 MPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDA 643
MP K V+W +LL A R HGNVE+ ER A+ L L P S V LSN+YA GRW+D
Sbjct: 404 MPQKEASVVWESLLGACRNHGNVELAERVAQKLLELSPQESSSFVQLSNMYASMGRWKDV 463
Query: 644 FSIRKEMRDCGMKRLPGFS 662
+R++MR G+++ PG S
Sbjct: 464 MEVRQKMRAQGVRKDPGCS 482
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 130/486 (26%), Positives = 221/486 (45%), Gaps = 62/486 (12%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
L + ++S+ Q H+ I KSGL +TF + LI A S A++
Sbjct: 11 LSFAEMATSISELHQAHAHILKSGLIHSTFAASRLI---ASVSTNSHAQA---------- 57
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
+ A +F + P + ++I +A + AL +F M
Sbjct: 58 ---------------IPYAHSIFSRIPNPNSYMWNTIIRAYANSPTPEAALTIFHQMLHA 102
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
V+P++ T + S G+ E R +HG V+K + + I L+++Y C + +A
Sbjct: 103 SVLPDKYTFTFALKSCGSFSGVEEGRQIHGHVLKTGLGDDLFIQNTLIHLYASCGCIEDA 162
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELA-RELFERIPSKDVVSWGTMIDGYLQVERL 268
R L D M ER++VSWN +L+ +A+ GL+ELA R +F P K+VVSW MI GY R
Sbjct: 163 RHLLDRMLERDVVSWNALLSAYAERGLMELASRRVFGETPVKNVVSWNAMITGYSHAGRF 222
Query: 269 SEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATI 328
SE L ++ M G+ P++ +V ++SAC A +G +H+ I K G F+ +
Sbjct: 223 SEVLVLFEDMQHAGVKPDNCTLVSVLSACAHVGALSQGEWVHAYIDKNGISIDGFVATAL 282
Query: 329 IHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWS 388
+ Y+ CG I A F ++ I++WN++I+G +G + A Q+F+ M
Sbjct: 283 VDMYSKCGSIEKALEVFNSCLRKDISTWNSIISGLSTHGSGQHALQIFSEM--------- 333
Query: 389 AMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLN- 447
++ G+ KPNE+T V V A + +G L EGR +++
Sbjct: 334 -LVEGF---------------------KPNEVTFVCVLSACSRAGLLDEGREMFNLMVHV 371
Query: 448 NSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTL 507
+ I ++D+ + G + A E+ + + SV W +++ HG+ L
Sbjct: 372 HGIQPTIEHYGCMVDLLGRVGLLEEAEELVQKMPQKEASVV-WESLLGACRNHGNVELAE 430
Query: 508 KIYSDL 513
++ L
Sbjct: 431 RVAQKL 436
Score = 165 bits (417), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 119/405 (29%), Positives = 196/405 (48%), Gaps = 55/405 (13%)
Query: 29 ALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLD 88
AL+ C + V +G+QIH + K+GL + FIQN+LI+LYA CG I A+ + D D
Sbjct: 114 ALKSCGSFSGVEEGRQIHGHVLKTGLGDDLFIQNTLIHLYASCGCIEDARHLLDRMLERD 173
Query: 89 PVACNIMISGYIRNDRLNDA-REVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMR 147
V+ N ++S Y + A R VF +TP+K VS+ +MI G++ + E L +F DM+
Sbjct: 174 VVSWNALLSAYAERGLMELASRRVFGETPVKNVVSWNAMITGYSHAGRFSEVLVLFEDMQ 233
Query: 148 ILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIK--LMIDGFVIISTNLLNMYCVCSS 205
GV P+ TL SV+S+ H+G + + +H + K + IDGFV +T L++MY C S
Sbjct: 234 HAGVKPDNCTLVSVLSACAHVGALSQGEWVHAYIDKNGISIDGFV--ATALVDMYSKCGS 291
Query: 206 LVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQV 265
+ +A +F+ ++I +WN +++G + G +
Sbjct: 292 IEKALEVFNSCLRKDISTWNSIISGLSTHGSGQ--------------------------- 324
Query: 266 ERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQ 325
AL ++ ML +G PN+V V ++SAC RA EG ++ +++V IQ
Sbjct: 325 ----HALQIFSEMLVEGFKPNEVTFVCVLSACSRAGLLDEGREMFNLMVHV-----HGIQ 375
Query: 326 ATIIHFYAAC-----GRINLARLQFEL----GIKDHIASWNALIAGFIRNGMIEDAR--- 373
TI H+ C GR+ L EL K+ W +L+ +G +E A
Sbjct: 376 PTIEHY--GCMVDLLGRVGLLEEAEELVQKMPQKEASVVWESLLGACRNHGNVELAERVA 433
Query: 374 QLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPN 418
Q + ++ S+ + + YA + +E+ M GV+ +
Sbjct: 434 QKLLELSPQESSSFVQLSNMYASMGRWKDVMEVRQKMRAQGVRKD 478
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 132/289 (45%), Gaps = 40/289 (13%)
Query: 26 LVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCS 85
LVS L C+ A+SQG+ +H+ I K+G+ + F+ +L+++Y+KCG I +A +F+SC
Sbjct: 244 LVSVLSACAHVGALSQGEWVHAYIDKNGISIDGFVATALVDMYSKCGSIEKALEVFNSC- 302
Query: 86 TLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRD 145
+R D ++ S+I G + + + AL++F +
Sbjct: 303 --------------LRKD----------------ISTWNSIISGLSTHGSGQHALQIFSE 332
Query: 146 MRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLM-IDGFVIISTNLLNMYCVCS 204
M + G PNEVT V+S+ G + E R + L++ + I + ++++
Sbjct: 333 MLVEGFKPNEVTFVCVLSACSRAGLLDEGREMFNLMVHVHGIQPTIEHYGCMVDLLGRVG 392
Query: 205 SLVEARSLFDEMKERNI-VSWNVMLNGFAKAGLVELARELFER---IPSKDVVSWGTMID 260
L EA L +M ++ V W +L G VELA + ++ + ++ S+ + +
Sbjct: 393 LLEEAEELVQKMPQKEASVVWESLLGACRNHGNVELAERVAQKLLELSPQESSSFVQLSN 452
Query: 261 GYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAF--GEGL 307
Y + R + + + + M G+ + +I G F GEGL
Sbjct: 453 MYASMGRWKDVMEVRQKMRAQGVRKDPG--CSMIEVDGTVYEFLAGEGL 499
>gi|296085795|emb|CBI31119.3| unnamed protein product [Vitis vinifera]
Length = 512
Score = 348 bits (894), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 179/459 (38%), Positives = 271/459 (59%), Gaps = 6/459 (1%)
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYL 263
S L + +LFD I+S+ + + G + A LF +P + W TM+ +
Sbjct: 9 SHLTVSGTLFDPFAAGRIISFCAV----SAQGDISHAYLLFLSLPRRTSFIWNTMLRAFT 64
Query: 264 QVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDF 323
+ + L++Y+ ML G PN+ L+ AC + G+ +H+ V+ G++ YDF
Sbjct: 65 DKKEPATVLSLYKYMLSTGFLPNNYTFSFLLQACAQLSDLSFGILLHAQAVRLGWEAYDF 124
Query: 324 IQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRD 383
+Q ++H YA+C ++ AR F+ + + +W A+I G+ ++G + ARQLF+ M +++
Sbjct: 125 VQNGLLHLYASCNCMDSARRLFDGSVNRDVVTWTAVINGYAKSGQVVVARQLFDEMPEKN 184
Query: 384 VYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHE 443
SWSAMI+GYAQ ALELF+ M AG +PN +V A A G L +GRW H
Sbjct: 185 AVSWSAMITGYAQIGLFREALELFNDMQIAGFRPNHGAIVGALTACAFLGALDQGRWIHA 244
Query: 444 YVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDA 503
YV N + L+ L A+IDMYAKCG + TA VF + DR V + ++I GLA HG +
Sbjct: 245 YVDRNRMVLDRILGTALIDMYAKCGCVETACRVFDEMLDR--DVFAFTSLISGLANHGHS 302
Query: 504 NLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGC 563
+++++ ++ + N +TFI +LS C GLV+ G R FKSM ++Y +EP ++HYGC
Sbjct: 303 ATAIEMFTRMQNEGVCPNEVTFICLLSACSRVGLVEEGLRIFKSMTNIYGIEPVVQHYGC 362
Query: 564 MVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSH 623
+VDLLGRAG LEDA+ V+R MP++ D + G LL A R+HG+VE+G+ + LA H
Sbjct: 363 LVDLLGRAGMLEDAKRVVREMPLEPDSYVLGALLNACRVHGDVELGKETVECLAERSLDH 422
Query: 624 GPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
G VLLSN+YA A +WED +RK M + +K++PG S
Sbjct: 423 GGVHVLLSNMYASANQWEDVAKVRKGMEEKKVKKVPGCS 461
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 122/453 (26%), Positives = 208/453 (45%), Gaps = 44/453 (9%)
Query: 74 ISQAKSMFDSCSTL-DPVACNIMIS--GYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGF 130
I Q +S TL DP A +IS ++ A +F P + + +M+ F
Sbjct: 4 IKQIQSHLTVSGTLFDPFAAGRIISFCAVSAQGDISHAYLLFLSLPRRTSFIWNTMLRAF 63
Query: 131 AQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFV 190
L +++ M G +PN T + ++ + L + +LH ++L + +
Sbjct: 64 TDKKEPATVLSLYKYMLSTGFLPNNYTFSFLLQACAQLSDLSFGILLHAQAVRLGWEAYD 123
Query: 191 IISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSK 250
+ LL++Y C+ + AR LFD R++V+W ++NG+AK+G V +AR+LF+ +P K
Sbjct: 124 FVQNGLLHLYASCNCMDSARRLFDGSVNRDVVTWTAVINGYAKSGQVVVARQLFDEMPEK 183
Query: 251 DVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIH 310
+ VSW MI GY Q+ EAL ++ M G PN IV ++AC A +G IH
Sbjct: 184 NAVSWSAMITGYAQIGLFREALELFNDMQIAGFRPNHGAIVGALTACAFLGALDQGRWIH 243
Query: 311 SIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIE 370
+ Y R+ L R+ LG ALI + + G +E
Sbjct: 244 A--------------------YVDRNRMVLDRI---LG--------TALIDMYAKCGCVE 272
Query: 371 DARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIA 430
A ++F+ M RDV++++++ISG A + A+E+F M + GV PNE+T + + A +
Sbjct: 273 TACRVFDEMLDRDVFAFTSLISGLANHGHSATAIEMFTRMQNEGVCPNEVTFICLLSACS 332
Query: 431 SSGTLKEGRWAHEYVLN-NSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSP 489
G ++EG + + N I ++D+ + G + A V R + P
Sbjct: 333 RVGLVEEGLRIFKSMTNIYGIEPVVQHYGCLVDLLGRAGMLEDAKRVV-----REMPLEP 387
Query: 490 ----WNAIICGLAMHGDANLTLKIYSDLEKRNI 518
A++ +HGD L + L +R++
Sbjct: 388 DSYVLGALLNACRVHGDVELGKETVECLAERSL 420
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 101/365 (27%), Positives = 174/365 (47%), Gaps = 62/365 (16%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
L+ C+ +S G +H+ + G E+ F+QN L++LYA C + A+ +FD D
Sbjct: 95 LQACAQLSDLSFGILLHAQAVRLGWEAYDFVQNGLLHLYASCNCMDSARRLFDGSVNRDV 154
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
V +I+GY ++ ++ AR++FD+ P K VS+++MI G+AQ +REALE+F DM+I
Sbjct: 155 VTWTAVINGYAKSGQVVVARQLFDEMPEKNAVSWSAMITGYAQIGLFREALELFNDMQIA 214
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
G PN + +++ LG + + R +H V + + I+ T L++MY C + A
Sbjct: 215 GFRPNHGAIVGALTACAFLGALDQGRWIHAYVDRNRMVLDRILGTALIDMYAKCGCVETA 274
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLS 269
+FDEM +R++ ++ +++G A G A E+F R+ +
Sbjct: 275 CRVFDEMLDRDVFAFTSLISGLANHGHSATAIEMFTRMQN-------------------- 314
Query: 270 EALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATII 329
+G+ PN+V + L+SAC R EGL+I F T I
Sbjct: 315 -----------EGVCPNEVTFICLLSACSRVGLVEEGLRI-------------FKSMTNI 350
Query: 330 HFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ-KRDVYSWS 388
+ GI+ + + L+ R GM+EDA+++ M + D Y
Sbjct: 351 Y-----------------GIEPVVQHYGCLVDLLGRAGMLEDAKRVVREMPLEPDSYVLG 393
Query: 389 AMISG 393
A+++
Sbjct: 394 ALLNA 398
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 107/237 (45%), Gaps = 33/237 (13%)
Query: 25 ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSC 84
A+V AL C+ A+ QG+ IH+ + ++ + + + +LI++YAKCG + A +FD
Sbjct: 222 AIVGALTACAFLGALDQGRWIHAYVDRNRMVLDRILGTALIDMYAKCGCVETACRVFD-- 279
Query: 85 STLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFR 144
LD R+VF ++TS+I G A + A+E+F
Sbjct: 280 EMLD--------------------RDVF---------AFTSLISGLANHGHSATAIEMFT 310
Query: 145 DMRILGVIPNEVTLASVISSSVHLGGIWE-CRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
M+ GV PNEVT ++S+ +G + E R+ + I+ V L+++
Sbjct: 311 RMQNEGVCPNEVTFICLLSACSRVGLVEEGLRIFKSMTNIYGIEPVVQHYGCLVDLLGRA 370
Query: 204 SSLVEARSLFDEMK-ERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMI 259
L +A+ + EM E + +LN G VEL +E E + + + G +
Sbjct: 371 GMLEDAKRVVREMPLEPDSYVLGALLNACRVHGDVELGKETVECLAERSLDHGGVHV 427
>gi|147838932|emb|CAN63659.1| hypothetical protein VITISV_008415 [Vitis vinifera]
Length = 760
Score = 348 bits (894), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 206/637 (32%), Positives = 326/637 (51%), Gaps = 41/637 (6%)
Query: 34 SAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACN 93
S ++SQ +Q H+ I K+GL ++T + L++ YA
Sbjct: 24 STTASLSQTRQAHAHILKTGLFNDTHLATKLLSHYAN----------------------- 60
Query: 94 IMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIP 153
N DA V D P S++++I F++ + AL F M G++P
Sbjct: 61 --------NMCFADATLVLDLVPEPNVFSFSTLIYAFSKFHQFHHALSTFSQMLTRGLMP 112
Query: 154 NEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLF 213
+ L S + + L + R +HG+ D + ++L++MY C+ + +A +F
Sbjct: 113 DNRVLPSAVKACAGLSALKPARQVHGIASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVF 172
Query: 214 DEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDV----VSWGTMIDGYLQVERLS 269
D M E ++VSW+ ++ +A+ G V+ A+ LF + V +SW MI G+ S
Sbjct: 173 DRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYS 232
Query: 270 EALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATII 329
EA+ M+ M G P+ I ++ A G G+ IH ++K G + + +I
Sbjct: 233 EAVLMFLDMHLRGFEPDGTTISSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSALI 292
Query: 330 HFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKR----DVY 385
Y C + F+ + S NA I G RNG +E + +LF ++ + +V
Sbjct: 293 DMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNVV 352
Query: 386 SWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYV 445
SW++MI+ +QN + ALELF M AGVKPN +T+ + A + L G+ AH +
Sbjct: 353 SWTSMIACCSQNGRDMEALELFREMQIAGVKPNSVTIPCLLPACGNIAALMHGKAAHCFS 412
Query: 446 LNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANL 505
L I+ + + +A+IDMYAKCG I + F I T ++ WNA+I G AMHG A
Sbjct: 413 LRRGISTDVYVGSALIDMYAKCGRIQASRICFDGIP--TKNLVCWNAVIAGYAMHGKAKE 470
Query: 506 TLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMV 565
++I+ +++ K + I+F VLS C +GL + G YF SM S Y +E ++HY CMV
Sbjct: 471 AMEIFDLMQRSGQKPDIISFTCVLSACSQSGLTEEGSYYFNSMSSKYGIEARVEHYACMV 530
Query: 566 DLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGP 625
LL RAG+LE A +IR MP+ D +WG LL++ R+H NV +GE AA+ L L+PS+
Sbjct: 531 TLLSRAGKLEQAYAMIRRMPVNPDACVWGALLSSCRVHNNVSLGEVAAEKLFELEPSNPG 590
Query: 626 SRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
+ +LLSNIYA G W + +R M++ G+++ PG S
Sbjct: 591 NYILLSNIYASKGMWNEVNRVRDMMKNKGLRKNPGCS 627
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 134/493 (27%), Positives = 239/493 (48%), Gaps = 49/493 (9%)
Query: 26 LVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCS 85
L SA++ C+ A+ +Q+H + SG +S++F+Q+SL+++Y KC I A +FD
Sbjct: 117 LPSAVKACAGLSALKPARQVHGIASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMF 176
Query: 86 TLDPVACNIMISGYIRNDRLNDAREVF----DKTPIKCCVSYTSMIMGFAQNDCWREALE 141
D V+ + +++ Y R +++A+ +F D +S+ MI GF + + EA+
Sbjct: 177 EPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVL 236
Query: 142 VFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYC 201
+F DM + G P+ T++SV+ + L + ++HG VIK + +S+ L++MY
Sbjct: 237 MFLDMHLRGFEPDGTTISSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYG 296
Query: 202 VCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSK----DVVSWGT 257
CS E +FD+M ++ S N + G ++ G VE + LF ++ + +VVSW +
Sbjct: 297 KCSCTSEMSQVFDQMDHMDVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTS 356
Query: 258 MIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAG 317
MI Q R EAL ++R M G+ PN V I L+ ACG A G H ++ G
Sbjct: 357 MIACCSQNGRDMEALELFREMQIAGVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRG 416
Query: 318 FDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFN 377
++ + +I YA CGRI +R+ F+ ++ WNA+IAG+ +G ++A ++F+
Sbjct: 417 ISTDVYVGSALIDMYAKCGRIQASRICFDGIPTKNLVCWNAVIAGYAMHGKAKEAMEIFD 476
Query: 378 NMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKE 437
MQ+ +G KP+ I+ V A + SG +E
Sbjct: 477 LMQR-------------------------------SGQKPDIISFTCVLSACSQSGLTEE 505
Query: 438 GRWAHEYVLNN-SITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSP----WNA 492
G + + + I A ++ + ++ G + A+ + R V+P W A
Sbjct: 506 GSYYFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYAMI-----RRMPVNPDACVWGA 560
Query: 493 IICGLAMHGDANL 505
++ +H + +L
Sbjct: 561 LLSSCRVHNNVSL 573
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 85/199 (42%), Gaps = 8/199 (4%)
Query: 427 CAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTS 486
C +++ +L + R AH ++L + + +L+ ++ YA A V + + +
Sbjct: 21 CLNSTTASLSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPE--PN 78
Query: 487 VSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGE-RYF 545
V ++ +I + + L +S + R + ++ + C AGL L R
Sbjct: 79 VFSFSTLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKAC--AGLSALKPARQV 136
Query: 546 KSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGN 605
+ SV + D +V + + Q+ DA V M + DVV W L+AA G
Sbjct: 137 HGIASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRM-FEPDVVSWSALVAAYARQGC 195
Query: 606 VEVGERAAKSL--AGLQPS 622
V+ +R + +G+QP+
Sbjct: 196 VDEAKRLFSEMGDSGVQPN 214
>gi|357141789|ref|XP_003572348.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
chloroplastic-like [Brachypodium distachyon]
Length = 555
Score = 348 bits (894), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 207/566 (36%), Positives = 299/566 (52%), Gaps = 48/566 (8%)
Query: 104 RLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVIS 163
R + A F P C + +I A + R A F + G P+ T S++
Sbjct: 27 RTSAASLYFPLFPSSCTFLHNLLIRASATSPSPRLAFAAFSSILRSGDTPDRFTFPSLLK 86
Query: 164 SSVHLGGIWEC-RMLHGLVIK--LMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKE-R 219
S+ L +H ++ L++D FV+ LL MY R +FD
Sbjct: 87 SASRLASFPRTGAQVHAQAVRRGLLVDVFVV--NTLLAMYAAFRDTRSMREVFDSCAGVA 144
Query: 220 NIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAML 279
++V+WN ML G+ K G + AR +FE++P ++ VSW M+ Y L A M+
Sbjct: 145 DLVTWNTMLGGYVKCGEIGEARRVFEQMPQRNGVSWSAMVGAYAGAGELDVAREMF---- 200
Query: 280 CDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRIN 339
D + A GR + ++I +A G +
Sbjct: 201 ------------DEMPAIGRNVVSWN---------------------SMITGFARHGLLP 227
Query: 340 LARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQ 399
LAR F+ ++ SWN ++ G+ NG + DAR+LF+ M ++DV SW+ MISGYAQ
Sbjct: 228 LARKMFDEMPVRNLVSWNTMVRGYAVNGEMNDARELFDRMPEKDVVSWTCMISGYAQARC 287
Query: 400 PNMALELFHGM-VDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLND--NL 456
LELF M ++ V PNE+TMVSV A A L+EGRWAH ++ + + L+ NL
Sbjct: 288 YTETLELFRAMQSESNVLPNEVTMVSVLSACAHLTALEEGRWAHAFIDKHKMVLDSEFNL 347
Query: 457 SAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKR 516
AA+IDMY+KCG + A ++F+ + + +VS WNA+I GLA++GD ++ ++ + +
Sbjct: 348 GAALIDMYSKCGRTDLAVKIFHSLDQK--NVSAWNALITGLAVNGDVRSSIDVFEQMRRS 405
Query: 517 NIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLED 576
K N ITF+GVL+ C H GLVD G R F+SM S V+P+ KHYGCMVD+LGRAG LE+
Sbjct: 406 GEKPNGITFVGVLTACAHGGLVDEGRRCFQSMASTCGVQPEAKHYGCMVDMLGRAGLLEE 465
Query: 577 AEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYAD 636
AEE+IRSMPM DV+I G LL A R+H V+V R + GL VL+S+IYA
Sbjct: 466 AEELIRSMPMVPDVMILGALLGACRMHKRVDVAARVQNEILGLSTQQSGCHVLISDIYAA 525
Query: 637 AGRWEDAFSIRKEMRDCGMKRLPGFS 662
AG+W DA R ++ G+ +L G S
Sbjct: 526 AGKWADALYARGVLQKFGISKLRGSS 551
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 140/477 (29%), Positives = 222/477 (46%), Gaps = 74/477 (15%)
Query: 42 GQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTL-DPVACNIMISGYI 100
G Q+H+ + GL + F+ N+L+ +YA + +FDSC+ + D V N M+ GY+
Sbjct: 98 GAQVHAQAVRRGLLVDVFVVNTLLAMYAAFRDTRSMREVFDSCAGVADLVTWNTMLGGYV 157
Query: 101 RNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLAS 160
+ + +AR VF++ P + VS+++M+ +A A E+F +M +G N V+ S
Sbjct: 158 KCGEIGEARRVFEQMPQRNGVSWSAMVGAYAGAGELDVAREMFDEMPAIG--RNVVSWNS 215
Query: 161 VISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERN 220
+I+ HGL L AR +FDEM RN
Sbjct: 216 MITGFAR----------HGL-------------------------LPLARKMFDEMPVRN 240
Query: 221 IVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLC 280
+VSWN M+ G+A G + ARELF+R+P KDVVSW MI GY Q +E L ++RAM
Sbjct: 241 LVSWNTMVRGYAVNGEMNDARELFDRMPEKDVVSWTCMISGYAQARCYTETLELFRAMQS 300
Query: 281 DG-IAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAG--FDCYDFIQATIIHFYAACGR 337
+ + PN+V +V ++SAC A EG H+ I K D + A +I Y+ CGR
Sbjct: 301 ESNVLPNEVTMVSVLSACAHLTALEEGRWAHAFIDKHKMVLDSEFNLGAALIDMYSKCGR 360
Query: 338 INLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQN 397
+LA F + ++++WNALI G NG DV S
Sbjct: 361 TDLAVKIFHSLDQKNVSAWNALITGLAVNG---------------DVRS----------- 394
Query: 398 EQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNN-SITLNDNL 456
++++F M +G KPN IT V V A A G + EGR + + + +
Sbjct: 395 -----SIDVFEQMRRSGEKPNGITFVGVLTACAHGGLVDEGRRCFQSMASTCGVQPEAKH 449
Query: 457 SAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDL 513
++DM + G + A E+ + V A++ MH ++ ++ +++
Sbjct: 450 YGCMVDMLGRAGLLEEAEELIRSM-PMVPDVMILGALLGACRMHKRVDVAARVQNEI 505
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 119/302 (39%), Gaps = 73/302 (24%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSG--LESNTFIQNSLINLYAKCGLISQAKSM 80
E+ +VS L C+ A+ +G+ H+ I K L+S + +LI++Y+KCG A +
Sbjct: 308 EVTMVSVLSACAHLTALEEGRWAHAFIDKHKMVLDSEFNLGAALIDMYSKCGRTDLAVKI 367
Query: 81 FDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREAL 140
F S + A N +I+ G A N R ++
Sbjct: 368 FHSLDQKNVSAWNALIT-------------------------------GLAVNGDVRSSI 396
Query: 141 EVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMY 200
+VF MR G PN +T V+++ H G + E R +M
Sbjct: 397 DVFEQMRRSGEKPNGITFVGVLTACAHGGLVDEGRRC------------------FQSMA 438
Query: 201 CVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPS-KDVVSWGTMI 259
C EA+ + M++ +AGL+E A EL +P DV+ G ++
Sbjct: 439 STCGVQPEAK------------HYGCMVDMLGRAGLLEEAEELIRSMPMVPDVMILGALL 486
Query: 260 DGYLQVERLSEALTMYRAMLCDGIAPND----VMIVDLISACGRAMAFGEGLQIHSIIVK 315
+R+ A + +L G++ V+I D+ +A G+ + + L ++ K
Sbjct: 487 GACRMHKRVDVAARVQNEIL--GLSTQQSGCHVLISDIYAAAGK---WADALYARGVLQK 541
Query: 316 AG 317
G
Sbjct: 542 FG 543
>gi|413946157|gb|AFW78806.1| hypothetical protein ZEAMMB73_634908 [Zea mays]
Length = 1145
Score = 348 bits (894), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 214/670 (31%), Positives = 342/670 (51%), Gaps = 68/670 (10%)
Query: 57 NTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTP 116
NT N+++ Y + G I+ A+ +FD+ + D + N M++GY + + +AR +F++ P
Sbjct: 125 NTVAWNAMVTCYVQNGDITLARKLFDAMPSRDVSSWNTMLTGYCHSQLMEEARNLFERMP 184
Query: 117 IKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRM 176
+ VS+T MI G+ + A ++FR M G+ P + L SV+S+ HLG
Sbjct: 185 ERNGVSWTVMISGYVLIEQHGRAWDMFRTMLCEGMTPEQPNLVSVLSAVRHLGKPGILES 244
Query: 177 LHGLVIKLMIDGFVIISTNLLNMYCVCSSLVE-ARSLFDEMKERNIVSWNV--------- 226
+H LV K + V++ T +LN Y ++++ A F+ M RN +W+
Sbjct: 245 IHVLVHKTGFERDVVVGTAILNGYTKDVNMLDSAVKFFEGMAARNEYTWSTIIAALSQAG 304
Query: 227 ----------------------MLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQ 264
ML G A+ G ++ A+ LF++I +VVSW MI GY+Q
Sbjct: 305 RIDDAFAVYQRDPLKSVPSRTSMLTGLARYGRIDDAKILFDQIHEPNVVSWNAMITGYMQ 364
Query: 265 VERLSEALTMYRAM----------LCDGIAPNDVMIVDLIS------------------- 295
E + EA ++ M + G A N L+S
Sbjct: 365 NEMVDEAEDLFNRMPFRNTISWAGMIAGYARNGRSEQALVSLQALHRKGMLPSLSSLTSS 424
Query: 296 --ACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFE-LGIKDH 352
AC A G Q+HS+ VKAG ++ +I Y I R F+ + +KD
Sbjct: 425 FFACSNIEALETGKQVHSLAVKAGCQFNSYVCNALITLYGKYRSIGSVRQIFDRMTVKDT 484
Query: 353 IASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVD 412
+ S+N+ ++ ++N + ++AR +FNNM DV SW+ +IS AQ +Q N A+E+F M+
Sbjct: 485 V-SYNSFMSALVQNNLFDEARDVFNNMPSPDVVSWTTIISACAQADQGNEAVEIFRSMLH 543
Query: 413 AGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINT 472
PN + + + G + G+ H + + ++ A++ MY KC S ++
Sbjct: 544 ERELPNPPILTILLGLSGNLGAPQLGQQIHTIAIKLGMDSGLVVANALVSMYFKCSSADS 603
Query: 473 AFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTC 532
+VF + +R + WN II G A HG +++Y + + N +TF+G+L C
Sbjct: 604 -LKVFDSMEER--DIFTWNTIITGYAQHGLGREAIRMYQLMVSAGVLPNEVTFVGLLHAC 660
Query: 533 CHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVI 592
H+GLVD G ++FKSM S Y + P L+HY CMVDLLGRAG ++ AE I MP++ D VI
Sbjct: 661 SHSGLVDEGHQFFKSMSSDYGLTPLLEHYACMVDLLGRAGDVQGAEHFIYDMPIEPDSVI 720
Query: 593 WGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRD 652
W LL A +IH NVE+G RAA+ L ++PS+ + V+LSNIY+ G W++ +RK M++
Sbjct: 721 WSALLGACKIHKNVEIGRRAAEKLFSIEPSNAGNYVMLSNIYSSQGMWDEVAKVRKLMKE 780
Query: 653 CGMKRLPGFS 662
G+ + PG S
Sbjct: 781 RGVNKDPGCS 790
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 142/543 (26%), Positives = 240/543 (44%), Gaps = 93/543 (17%)
Query: 101 RNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLAS 160
R RL++AREVFD P + +++ SMI + N+ +A D G N T
Sbjct: 45 RLGRLHEAREVFDSMPFRDIIAWNSMIFAYC-NNGMPDAGRSLADAISGG---NLRTGTI 100
Query: 161 VISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC----SSLVEARSLFDEM 216
++S G + + R + DG + +T N C + AR LFD M
Sbjct: 101 LLSGYARAGRVRDARRV--------FDGMGVRNTVAWNAMVTCYVQNGDITLARKLFDAM 152
Query: 217 KERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYR 276
R++ SWN ML G+ + L+E AR LFER+P ++ VSW MI GY+ +E+ A M+R
Sbjct: 153 PSRDVSSWNTMLTGYCHSQLMEEARNLFERMPERNGVSWTVMISGYVLIEQHGRAWDMFR 212
Query: 277 AMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFD----------------- 319
MLC+G+ P +V ++SA G IH ++ K GF+
Sbjct: 213 TMLCEGMTPEQPNLVSVLSAVRHLGKPGILESIHVLVHKTGFERDVVVGTAILNGYTKDV 272
Query: 320 ---------------CYDFIQATIIHFYAACGRIN-----------------------LA 341
++ +TII + GRI+ LA
Sbjct: 273 NMLDSAVKFFEGMAARNEYTWSTIIAALSQAGRIDDAFAVYQRDPLKSVPSRTSMLTGLA 332
Query: 342 R--------LQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISG 393
R + F+ + ++ SWNA+I G+++N M+++A LFN M R+ SW+ MI+G
Sbjct: 333 RYGRIDDAKILFDQIHEPNVVSWNAMITGYMQNEMVDEAEDLFNRMPFRNTISWAGMIAG 392
Query: 394 YAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLN 453
YA+N + AL + G+ P+ ++ S F A ++ L+ G+ H + N
Sbjct: 393 YARNGRSEQALVSLQALHRKGMLPSLSSLTSSFFACSNIEALETGKQVHSLAVKAGCQFN 452
Query: 454 DNLSAAIIDMYAKCGSINTAFEVFYHIRDRTT--SVSPWNAIICGLAMHGDANLTLKIYS 511
+ A+I +Y K SI + ++F DR T +N+ + L + + +++
Sbjct: 453 SYVCNALITLYGKYRSIGSVRQIF----DRMTVKDTVSYNSFMSALVQNNLFDEARDVFN 508
Query: 512 DLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRA 571
++ ++ +++ ++S C A + F+SM E +L + + LLG +
Sbjct: 509 NMPSPDV----VSWTTIISACAQADQGNEAVEIFRSMLH----ERELPNPPILTILLGLS 560
Query: 572 GQL 574
G L
Sbjct: 561 GNL 563
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 88/277 (31%), Positives = 145/277 (52%), Gaps = 32/277 (11%)
Query: 33 CSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVAC 92
CS A+ G+Q+HSL K+G + N+++ N+LI LY K I + +FD + D V+
Sbjct: 428 CSNIEALETGKQVHSLAVKAGCQFNSYVCNALITLYGKYRSIGSVRQIFDRMTVKDTVSY 487
Query: 93 NIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVI 152
N +S ++N+ ++AR+VF+ P VS+T++I AQ D EA+E+FR M +
Sbjct: 488 NSFMSALVQNNLFDEARDVFNNMPSPDVVSWTTIISACAQADQGNEAVEIFRSMLHEREL 547
Query: 153 PNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSL 212
PN L ++ S +LG + +H + IKL +D ++++ L++MY CSS ++ +
Sbjct: 548 PNPPILTILLGLSGNLGAPQLGQQIHTIAIKLGMDSGLVVANALVSMYFKCSS-ADSLKV 606
Query: 213 FDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEAL 272
FD M+ER+I +WN ++ G+A+ GL EA+
Sbjct: 607 FDSMEERDIFTWNTIITGYAQHGLGR-------------------------------EAI 635
Query: 273 TMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQI 309
MY+ M+ G+ PN+V V L+ AC + EG Q
Sbjct: 636 RMYQLMVSAGVLPNEVTFVGLLHACSHSGLVDEGHQF 672
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 73/337 (21%), Positives = 138/337 (40%), Gaps = 52/337 (15%)
Query: 325 QATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDV 384
Q+ I GR++ AR F+ I +WN++I + NGM + R L + + ++
Sbjct: 36 QSARIRELGRLGRLHEAREVFDSMPFRDIIAWNSMIFAYCNNGMPDAGRSLADAISGGNL 95
Query: 385 YSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEY 444
+ + ++SGYA+ + A +F GM GV+
Sbjct: 96 RTGTILLSGYARAGRVRDARRVFDGM---GVR---------------------------- 124
Query: 445 VLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDAN 504
N++ N A++ Y + G I A ++F + R VS WN ++ G
Sbjct: 125 ---NTVAWN-----AMVTCYVQNGDITLARKLFDAMPSR--DVSSWNTMLTGYCHSQLME 174
Query: 505 LTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSM--KSVYNVEPDLKHYG 562
++ + +RN ++ G + H D+ F++M + + +P+L
Sbjct: 175 EARNLFERMPERNGVSWTVMISGYVLIEQHGRAWDM----FRTMLCEGMTPEQPNLVSVL 230
Query: 563 CMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPS 622
V LG+ G LE ++ + DVV+ +L +V + + A K G+
Sbjct: 231 SAVRHLGKPGILESIHVLVHKTGFERDVVVGTAILNG--YTKDVNMLDSAVKFFEGMAAR 288
Query: 623 HGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLP 659
+ + + + AGR +DAF++ + RD +K +P
Sbjct: 289 NEYTWSTIIAALSQAGRIDDAFAVYQ--RD-PLKSVP 322
>gi|242038427|ref|XP_002466608.1| hypothetical protein SORBIDRAFT_01g010975 [Sorghum bicolor]
gi|241920462|gb|EER93606.1| hypothetical protein SORBIDRAFT_01g010975 [Sorghum bicolor]
Length = 752
Score = 348 bits (894), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 199/603 (33%), Positives = 334/603 (55%), Gaps = 4/603 (0%)
Query: 56 SNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKT 115
+++F + +++ + K G I+ A+ +FD V+ M+ ++ + DA +++++
Sbjct: 152 ASSFTYDFMVSEHVKAGDIASARRLFDGMPEKSVVSYTTMVDALMKRGSVKDAVKLYERC 211
Query: 116 PIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECR 175
P+ +T+MI GF +N+ ++A VFR M V PN VTL VI + V G
Sbjct: 212 PLYSVAFFTAMIAGFVRNELHKDAFPVFRKMLRCSVRPNVVTLICVIKACVGAGEFDLAM 271
Query: 176 MLHGLVIKL-MIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKA 234
+ GL IK + + + + +L+ +Y A +FD+M+ R++VSW +L+ +A+
Sbjct: 272 GVVGLAIKWNLFEKSIEVHNSLITLYLRMGDAAAAHRVFDDMEVRDVVSWTALLDVYAEL 331
Query: 235 GLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLI 294
G +E AR + + +P ++ VSW T+I + Q +EAL +Y ML +G PN ++
Sbjct: 332 GDLEGARRVLDAMPERNEVSWSTLIARHEQKGDSAEALKLYSQMLAEGCRPNISCFSSVL 391
Query: 295 SACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIA 354
SAC G +IH+ +K GF F+ +++I Y C + A+ F + +
Sbjct: 392 SACATLHDLRGGTRIHANALKMGFSSSLFVSSSLIDMYCKCKQCTDAQRIFNSLPEKNTV 451
Query: 355 SWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAG 414
WN+LI+G+ NG + +A +LF M R+ SW+ MISGYA+N + AL F M+ +G
Sbjct: 452 CWNSLISGYSWNGKMVEAEELFKKMPARNAASWNTMISGYAENRRFGDALNYFCAMLASG 511
Query: 415 VKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAF 474
P EIT+ SV A A+ +L+ G+ H ++ I N + A+ DMYAK G ++++
Sbjct: 512 QIPGEITLSSVLLACANLCSLEMGKMVHAEIVKLGIEDNIFMGTALSDMYAKSGDLDSSR 571
Query: 475 EVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCH 534
+FY + ++ W A++ GLA +G A ++ ++ ++ I N TF+ +L C H
Sbjct: 572 RMFYQMPEKNNIT--WTAMVQGLAENGFAEESILLFENMIANRIAPNEHTFLAILFACSH 629
Query: 535 AGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWG 594
GLV+ YF++M++ + + P KHY CMVD+L RAG+L +AEE++ +P K D W
Sbjct: 630 CGLVEQAIHYFETMQA-HGIPPKDKHYTCMVDVLARAGRLPEAEELLMKVPSKLDTSSWS 688
Query: 595 TLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCG 654
+LL+A + N E+GERAAK L L+ + VLLSN+YA G+W+DA R M+
Sbjct: 689 SLLSACNTYRNKEIGERAAKKLHELEKDNTAGYVLLSNMYASCGKWKDAAETRILMQGPR 748
Query: 655 MKR 657
+K+
Sbjct: 749 LKK 751
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 119/468 (25%), Positives = 220/468 (47%), Gaps = 37/468 (7%)
Query: 54 LESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFD 113
E + + NSLI LY + G + A +FD D V+ ++ Y L AR V D
Sbjct: 283 FEKSIEVHNSLITLYLRMGDAAAAHRVFDDMEVRDVVSWTALLDVYAELGDLEGARRVLD 342
Query: 114 KTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWE 173
P + VS++++I Q EAL+++ M G PN +SV+S+ L +
Sbjct: 343 AMPERNEVSWSTLIARHEQKGDSAEALKLYSQMLAEGCRPNISCFSSVLSACATLHDLRG 402
Query: 174 CRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAK 233
+H +K+ + +S++L++MYC C +A+ +F+ + E+N V WN +++G++
Sbjct: 403 GTRIHANALKMGFSSSLFVSSSLIDMYCKCKQCTDAQRIFNSLPEKNTVCWNSLISGYSW 462
Query: 234 AGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDL 293
G + A ELF+++P+++ SW TMI GY + R +AL + AML G P ++ + +
Sbjct: 463 NGKMVEAEELFKKMPARNAASWNTMISGYAENRRFGDALNYFCAMLASGQIPGEITLSSV 522
Query: 294 ISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQF-ELGIKDH 352
+ AC + G +H+ IVK G + F+ + YA G ++ +R F ++ K++
Sbjct: 523 LLACANLCSLEMGKMVHAEIVKLGIEDNIFMGTALSDMYAKSGDLDSSRRMFYQMPEKNN 582
Query: 353 IASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVD 412
I +W A++ G NG E++ LF N M+
Sbjct: 583 I-TWTAMVQGLAENGFAEESILLFEN-------------------------------MIA 610
Query: 413 AGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINT 472
+ PNE T +++ A + G +++ E + + I D ++D+ A+ G +
Sbjct: 611 NRIAPNEHTFLAILFACSHCGLVEQAIHYFETMQAHGIPPKDKHYTCMVDVLARAGRLPE 670
Query: 473 AFEVFYHIRDRTTSVSPWNAIICGLAMHGDANL---TLKIYSDLEKRN 517
A E+ + + + S W++++ + + + K +LEK N
Sbjct: 671 AEELLMKVPSKLDT-SSWSSLLSACNTYRNKEIGERAAKKLHELEKDN 717
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 115/285 (40%), Gaps = 75/285 (26%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E+ L S L C+ ++ G+ +H+ I K G+E N F+ +L ++YAK G
Sbjct: 516 EITLSSVLLACANLCSLEMGKMVHAEIVKLGIEDNIFMGTALSDMYAKSG---------- 565
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
L+ +R +F + P K +++T+M+ G A+N E++ +
Sbjct: 566 ---------------------DLDSSRRMFYQMPEKNNITWTAMVQGLAENGFAEESILL 604
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
F +M + PNE T +++ + H
Sbjct: 605 FENMIANRIAPNEHTFLAILFACSH----------------------------------- 629
Query: 203 CSSLVEARSLFDEMKERNIVS----WNVMLNGFAKAGLVELARELFERIPSK-DVVSWGT 257
C + +A F+ M+ I + M++ A+AG + A EL ++PSK D SW +
Sbjct: 630 CGLVEQAIHYFETMQAHGIPPKDKHYTCMVDVLARAGRLPEAEELLMKVPSKLDTSSWSS 689
Query: 258 MIDG---YLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGR 299
++ Y E A + D A V++ ++ ++CG+
Sbjct: 690 LLSACNTYRNKEIGERAAKKLHELEKDNTA-GYVLLSNMYASCGK 733
>gi|225442904|ref|XP_002264123.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930 [Vitis vinifera]
Length = 724
Score = 348 bits (893), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 197/610 (32%), Positives = 322/610 (52%), Gaps = 43/610 (7%)
Query: 61 QNSLINLYAKCGLISQAKSMFDS--CSTL--DPVACNIMISGYIRND--RLNDAREVFDK 114
Q ++L C ++Q K + C+ L +P+ +I+ +++ + AR VFD
Sbjct: 19 QTPPLSLIKTCKSMAQLKQIHSQTICTGLISNPIVPAQIIAFCCKHELGDMEYARMVFDT 78
Query: 115 TPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWEC 174
P + +MI G+++ C A+ ++ +M GV+P+E T ++ +
Sbjct: 79 MPGPNHFVWNNMIKGYSRVGCPNSAVSMYCEMLERGVMPDEYTYPFLLKRFTRDTAVKCG 138
Query: 175 RMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKA 234
R LH ++KL V + L+++Y + +
Sbjct: 139 RELHDHIVKLGFSSNVFVQNALIHLYSL-------------------------------S 167
Query: 235 GLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLI 294
G V +AR +F+R DVV+W MI GY + ++ E++ ++ M + P+ + +V ++
Sbjct: 168 GEVSVARGVFDRSSKGDVVTWNVMISGYNRSKQFDESMKLFDEMERMRVLPSSITLVSVL 227
Query: 295 SACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIA 354
SAC + G ++H + + ++ +I YAACG ++ A F+ +
Sbjct: 228 SACSKLKDLNVGKRVHRYVKDLKIEPVRVLENALIDMYAACGDMDTALGIFDNMKSRDVI 287
Query: 355 SWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAG 414
SW A++ GF G + AR F+ M +RD SW+AMI GY Q + L LF M A
Sbjct: 288 SWTAIVTGFTNLGQVGLARNYFDKMPERDFVSWTAMIDGYLQVNRFKEVLSLFREMQAAN 347
Query: 415 VKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAF 474
+KP+E TMVS+ A A G L+ G W Y+ N I ++ + A+IDMY CG++ A
Sbjct: 348 IKPDEFTMVSILTACAHLGALELGEWIKAYIDKNEIKIDSFVGNALIDMYFNCGNVEKAI 407
Query: 475 EVFYHI--RDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTC 532
+F + RD+ + W A+I GLA++G L ++S + K +I + +T IGVL C
Sbjct: 408 RIFNAMPHRDKIS----WTAVIFGLAINGYGEEALDMFSQMLKASITPDEVTCIGVLCAC 463
Query: 533 CHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVI 592
H+G+VD G+++F M + + +EP++ HYGCMVDLLGRAG L++A EVI++MP+K + ++
Sbjct: 464 THSGMVDKGKKFFARMTTQHGIEPNVAHYGCMVDLLGRAGHLKEAHEVIKNMPVKPNSIV 523
Query: 593 WGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRD 652
WG+LL A R+H + E+ E AA+ + L+P +G VLL NIYA RWE +RK M D
Sbjct: 524 WGSLLGACRVHRDEEMAEMAAQQILELEPENGAVYVLLCNIYAACNRWEKLHEVRKLMMD 583
Query: 653 CGMKRLPGFS 662
G+K+ PG S
Sbjct: 584 RGIKKTPGCS 593
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 141/493 (28%), Positives = 233/493 (47%), Gaps = 69/493 (13%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
L+ + AV G+++H I K G SN F+QN+LI+LY+ G +S A+ +FD S D
Sbjct: 126 LKRFTRDTAVKCGRELHDHIVKLGFSSNVFVQNALIHLYSLSGEVSVARGVFDRSSKGDV 185
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
V N+MISGY R+ + +++ ++FD +M +
Sbjct: 186 VTWNVMISGYNRSKQFDESMKLFD-------------------------------EMERM 214
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
V+P+ +TL SV+S+ L + + +H V L I+ ++ L++MY C + A
Sbjct: 215 RVLPSSITLVSVLSACSKLKDLNVGKRVHRYVKDLKIEPVRVLENALIDMYAACGDMDTA 274
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLS 269
+FD MK R+++SW ++ GF G V LAR F+++P +D VSW MIDGYLQV R
Sbjct: 275 LGIFDNMKSRDVISWTAIVTGFTNLGQVGLARNYFDKMPERDFVSWTAMIDGYLQVNRFK 334
Query: 270 EALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATII 329
E L+++R M I P++ +V +++AC A G I + I K F+ +I
Sbjct: 335 EVLSLFREMQAANIKPDEFTMVSILTACAHLGALELGEWIKAYIDKNEIKIDSFVGNALI 394
Query: 330 HFYAACGRINLA-RLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWS 388
Y CG + A R+ + +D I SW A+I G NG E+
Sbjct: 395 DMYFNCGNVEKAIRIFNAMPHRDKI-SWTAVIFGLAINGYGEE----------------- 436
Query: 389 AMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG-RWAHEYVLN 447
AL++F M+ A + P+E+T + V CA SG + +G ++
Sbjct: 437 --------------ALDMFSQMLKASITPDEVTCIGVLCACTHSGMVDKGKKFFARMTTQ 482
Query: 448 NSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGD---AN 504
+ I N ++D+ + G + A EV ++ + S+ W +++ +H D A
Sbjct: 483 HGIEPNVAHYGCMVDLLGRAGHLKEAHEVIKNMPVKPNSIV-WGSLLGACRVHRDEEMAE 541
Query: 505 LTLKIYSDLEKRN 517
+ + +LE N
Sbjct: 542 MAAQQILELEPEN 554
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 95/383 (24%), Positives = 180/383 (46%), Gaps = 66/383 (17%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+ LVS L CS ++ G+++H + +E ++N+LI++YA CG + A +FD+
Sbjct: 221 ITLVSVLSACSKLKDLNVGKRVHRYVKDLKIEPVRVLENALIDMYAACGDMDTALGIFDN 280
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
+ D ++ +++G+ ++ AR FDK P + VS+T+MI G+ Q + ++E L +F
Sbjct: 281 MKSRDVISWTAIVTGFTNLGQVGLARNYFDKMPERDFVSWTAMIDGYLQVNRFKEVLSLF 340
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIK--LMIDGFVIISTNLLNMYC 201
R+M+ + P+E T+ S++++ HLG + + + K + ID FV L++MY
Sbjct: 341 REMQAANIKPDEFTMVSILTACAHLGALELGEWIKAYIDKNEIKIDSFV--GNALIDMYF 398
Query: 202 VCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDG 261
C ++ +A +F+ M R+ +SW ++ G A I+G
Sbjct: 399 NCGNVEKAIRIFNAMPHRDKISWTAVIFGLA--------------------------ING 432
Query: 262 YLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCY 321
Y + EAL M+ ML I P++V + ++ AC HS +V
Sbjct: 433 YGE-----EALDMFSQMLKASITPDEVTCIGVLCAC-----------THSGMVDK----- 471
Query: 322 DFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ- 380
G+ AR+ + GI+ ++A + ++ R G +++A ++ NM
Sbjct: 472 --------------GKKFFARMTTQHGIEPNVAHYGCMVDLLGRAGHLKEAHEVIKNMPV 517
Query: 381 KRDVYSWSAMISGYAQNEQPNMA 403
K + W +++ + MA
Sbjct: 518 KPNSIVWGSLLGACRVHRDEEMA 540
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 127/297 (42%), Gaps = 80/297 (26%)
Query: 13 QKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCG 72
Q AN++ E +VS L C+ A+ G+ I + I K+ ++ ++F+ N+LI++Y CG
Sbjct: 344 QAANIKPD--EFTMVSILTACAHLGALELGEWIKAYIDKNEIKIDSFVGNALIDMYFNCG 401
Query: 73 LISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQ 132
+ +A IR +F+ P + +S+T++I G A
Sbjct: 402 NVEKA----------------------IR---------IFNAMPHRDKISWTAVIFGLAI 430
Query: 133 NDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVII 192
N EAL++F M + P+EVT V+ + H G M+D
Sbjct: 431 NGYGEEALDMFSQMLKASITPDEVTCIGVLCACTHSG---------------MVD----- 470
Query: 193 STNLLNMYCVCSSLVEARSLFDEMK-----ERNIVSWNVMLNGFAKAGLVELARELFERI 247
+ + F M E N+ + M++ +AG ++ A E+ + +
Sbjct: 471 ---------------KGKKFFARMTTQHGIEPNVAHYGCMVDLLGRAGHLKEAHEVIKNM 515
Query: 248 PSK-DVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPND----VMIVDLISACGR 299
P K + + WG+++ G +V R E M + + + P + V++ ++ +AC R
Sbjct: 516 PVKPNSIVWGSLL-GACRVHRDEEMAEMAAQQILE-LEPENGAVYVLLCNIYAACNR 570
>gi|224137432|ref|XP_002322556.1| predicted protein [Populus trichocarpa]
gi|222867186|gb|EEF04317.1| predicted protein [Populus trichocarpa]
Length = 702
Score = 348 bits (892), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 210/608 (34%), Positives = 328/608 (53%), Gaps = 29/608 (4%)
Query: 64 LINLYAKCGLISQAKSMFDS--CSTLDPVAC-NIMISGYIRNDRLNDAREVFDKTPIKCC 120
+I Y + G + +A+ +FDS CS VAC N MISGY++ R+N+A+ +FD+ P+K
Sbjct: 74 MITCYTRNGEVEKARELFDSLPCSYRKGVACWNAMISGYVKKGRVNEAKRLFDEMPVKNL 133
Query: 121 VSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGL 180
+S+ SM+ G+ QN R LE F +M V+ + + I L W+
Sbjct: 134 ISWNSMLAGYTQNRKMRLGLEFFNEMDERDVVSWNLMVDGFIQVG-DLDSAWK------- 185
Query: 181 VIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELA 240
+ V+ +L+ + +++E+R LFD+M RNIVSWN M++ + + ++ A
Sbjct: 186 FFQETQKPNVVSWVTMLSGFARNGNILESRRLFDQMPSRNIVSWNAMISAYVQRCEIDEA 245
Query: 241 RELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRA 300
LFE +P +D VSW TMI+GY+++ +L EA + M I MI I C +
Sbjct: 246 SRLFEEMPERDSVSWTTMINGYVRIGKLDEARELLNEMPYRNIGAQTAMISGYIQ-CNKV 304
Query: 301 MAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALI 360
E + I C++ +I YA GRIN A + + + +WN +I
Sbjct: 305 ---DEARRFFDEIGTWDVVCWN----AMIAGYAHHGRINEALCLSKRMVNKDMVTWNTMI 357
Query: 361 AGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEI 420
+ + + G ++ A ++F M +RD+ SW+++I+G+ N Q AL+ F M G KP+++
Sbjct: 358 SCYAQVGQMDRAVKIFEEMGERDLVSWNSLIAGFMLNGQNLDALKSFALMGHEGKKPDQL 417
Query: 421 TMVSVFCAIASSGTLKEGRWAHEYVLN----NSITLNDNLSAAIIDMYAKCGSINTAFEV 476
+ + A+ L+ G H+ V+ N + +N+ A+I MYAKCG I A V
Sbjct: 418 SFACGLSSCATIAALQVGNQLHQVVVKGGYLNYLVVNN----ALITMYAKCGRILEAGLV 473
Query: 477 FYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAG 536
F I V WN++I G A++G LK++ ++ + + +TFIG+LS C HAG
Sbjct: 474 FNGICH--ADVISWNSLIGGYAINGYGKEALKLFEEMASEGMAPDEVTFIGILSACNHAG 531
Query: 537 LVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTL 596
+VD G + FK M VY +EP +HY CMVDLLGR G+L++A E++R M +KA +WG L
Sbjct: 532 MVDHGLKLFKCMSKVYAIEPLAEHYACMVDLLGRVGRLDEAFEIVRGMKVKATAGVWGAL 591
Query: 597 LAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMK 656
L A R HGN+E+G AA L+ +P + VLLSNI+A+A RW + +R M
Sbjct: 592 LGACRAHGNLELGRLAAHKLSEFEPHKTSNYVLLSNIHAEANRWNEVQEVRMLMNASSTV 651
Query: 657 RLPGFSGV 664
+ PG S V
Sbjct: 652 KEPGCSWV 659
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 113/463 (24%), Positives = 219/463 (47%), Gaps = 51/463 (11%)
Query: 49 IFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDA 108
F+ + N ++++ +A+ G I +++ +FD + + V+ N MIS Y++ +++A
Sbjct: 186 FFQETQKPNVVSWVTMLSGFARNGNILESRRLFDQMPSRNIVSWNAMISAYVQRCEIDEA 245
Query: 109 REVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDM--RILGVIPNEVTLASVISSSV 166
+F++ P + VS+T+MI G+ + EA E+ +M R +G ++IS +
Sbjct: 246 SRLFEEMPERDSVSWTTMINGYVRIGKLDEARELLNEMPYRNIG------AQTAMISGYI 299
Query: 167 HLGGIWECRMLHGLVIKLMIDGFVIISTN-LLNMYCVCSSLVEARSLFDEMKERNIVSWN 225
+ E R I + ++ N ++ Y + EA L M +++V+WN
Sbjct: 300 QCNKVDEARRFFD-----EIGTWDVVCWNAMIAGYAHHGRINEALCLSKRMVNKDMVTWN 354
Query: 226 VMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAP 285
M++ +A+ G ++ A ++FE + +D+VSW ++I G++ + +AL + M +G P
Sbjct: 355 TMISCYAQVGQMDRAVKIFEEMGERDLVSWNSLIAGFMLNGQNLDALKSFALMGHEGKKP 414
Query: 286 NDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQF 345
+ + +S+C A G Q+H ++VK G+ Y + +I YA CGRI A L F
Sbjct: 415 DQLSFACGLSSCATIAALQVGNQLHQVVVKGGYLNYLVVNNALITMYAKCGRILEAGLVF 474
Query: 346 ELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALE 405
+ SWN+LI G+ I+GY + AL+
Sbjct: 475 NGICHADVISWNSLIGGYA--------------------------INGYGKE-----ALK 503
Query: 406 LFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLS---AAIID 462
LF M G+ P+E+T + + A +G + G + + + + L+ A ++D
Sbjct: 504 LFEEMASEGMAPDEVTFIGILSACNHAGMVDHG--LKLFKCMSKVYAIEPLAEHYACMVD 561
Query: 463 MYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANL 505
+ + G ++ AFE+ ++ + T+ W A++ HG+ L
Sbjct: 562 LLGRVGRLDEAFEIVRGMKVKATA-GVWGALLGACRAHGNLEL 603
Score = 132 bits (332), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 109/420 (25%), Positives = 193/420 (45%), Gaps = 47/420 (11%)
Query: 185 MIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELF 244
M + + +++++Y + AR+LFD+M RN+VSWN M++G+ G + A +LF
Sbjct: 1 MAEKNTVTYNSMISVYAKNGRINAARNLFDKMPRRNLVSWNTMVSGYLHNGKFDEAYKLF 60
Query: 245 ERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLC---DGIAPNDVMIVDLISACGR-- 299
+P +D+ SW MI Y + + +A ++ ++ C G+A + MI + GR
Sbjct: 61 VIMPRRDLFSWTLMITCYTRNGEVEKARELFDSLPCSYRKGVACWNAMISGYVKK-GRVN 119
Query: 300 -AMAFGEGLQIHSII--------------VKAGFDCYDFIQAT-------IIHFYAACGR 337
A + + + ++I ++ G + ++ + ++ + G
Sbjct: 120 EAKRLFDEMPVKNLISWNSMLAGYTQNRKMRLGLEFFNEMDERDVVSWNLMVDGFIQVGD 179
Query: 338 INLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQN 397
++ A F+ K ++ SW +++GF RNG I ++R+LF+ M R++ SW+AMIS Y Q
Sbjct: 180 LDSAWKFFQETQKPNVVSWVTMLSGFARNGNILESRRLFDQMPSRNIVSWNAMISAYVQR 239
Query: 398 EQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLS 457
+ + A LF M + + ++ ++ G L E R +LN N
Sbjct: 240 CEIDEASRLFEEMPER----DSVSWTTMINGYVRIGKLDEAR----ELLNEMPYRNIGAQ 291
Query: 458 AAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRN 517
A+I Y +C ++ A F I T V WNA+I G A HG N L L KR
Sbjct: 292 TAMISGYIQCNKVDEARRFFDEI--GTWDVVCWNAMIAGYAHHGRINEALC----LSKRM 345
Query: 518 IKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDA 577
+ + +T+ ++S G +D + F+ M E DL + ++ GQ DA
Sbjct: 346 VNKDMVTWNTMISCYAQVGQMDRAVKIFEEMG-----ERDLVSWNSLIAGFMLNGQNLDA 400
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 140/286 (48%), Gaps = 26/286 (9%)
Query: 327 TIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYS 386
++I YA GRIN AR F+ + ++ SWN +++G++ NG ++A +LF M +RD++S
Sbjct: 11 SMISVYAKNGRINAARNLFDKMPRRNLVSWNTMVSGYLHNGKFDEAYKLFVIMPRRDLFS 70
Query: 387 WSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIAS-SGTLKEGRWAHEYV 445
W+ MI+ Y +N + A ELF + + K V C A SG +K+GR
Sbjct: 71 WTLMITCYTRNGEVEKARELFDSLPCSYRK-------GVACWNAMISGYVKKGRVNEAKR 123
Query: 446 LNNSITLNDNLS-AAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDAN 504
L + + + + +S +++ Y + + E F + +R V WN ++ G GD +
Sbjct: 124 LFDEMPVKNLISWNSMLAGYTQNRKMRLGLEFFNEMDER--DVVSWNLMVDGFIQVGDLD 181
Query: 505 LTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCM 564
K + + +K N+ ++++ +LS G + R F M S ++ + M
Sbjct: 182 SAWKFFQETQKPNV----VSWVTMLSGFARNGNILESRRLFDQMPS-----RNIVSWNAM 232
Query: 565 VDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGE 610
+ + ++++A + MP + D V W T+ I+G V +G+
Sbjct: 233 ISAYVQRCEIDEASRLFEEMPER-DSVSWTTM-----INGYVRIGK 272
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 91/367 (24%), Positives = 163/367 (44%), Gaps = 47/367 (12%)
Query: 47 SLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLN 106
S +F+ E ++ ++IN Y + G + +A+ + + + A MISGYI+ ++++
Sbjct: 246 SRLFEEMPERDSVSWTTMINGYVRIGKLDEARELLNEMPYRNIGAQTAMISGYIQCNKVD 305
Query: 107 DAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSV 166
+AR FD+ V + +MI G+A + EAL + + M V + VT ++IS
Sbjct: 306 EARRFFDEIGTWDVVCWNAMIAGYAHHGRINEALCLSKRM----VNKDMVTWNTMISCYA 361
Query: 167 HLG------GIWECRMLHGLV-IKLMIDGFVIISTNL------------------LNMYC 201
+G I+E LV +I GF++ NL L+ C
Sbjct: 362 QVGQMDRAVKIFEEMGERDLVSWNSLIAGFMLNGQNLDALKSFALMGHEGKKPDQLSFAC 421
Query: 202 VCSS--LVEARSLFDEMKE--------RNIVSWNVMLNGFAKAGLVELARELFERIPSKD 251
SS + A + +++ + +V N ++ +AK G + A +F I D
Sbjct: 422 GLSSCATIAALQVGNQLHQVVVKGGYLNYLVVNNALITMYAKCGRILEAGLVFNGICHAD 481
Query: 252 VVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHS 311
V+SW ++I GY EAL ++ M +G+AP++V + ++SAC A GL++
Sbjct: 482 VISWNSLIGGYAINGYGKEALKLFEEMASEGMAPDEVTFIGILSACNHAGMVDHGLKLFK 541
Query: 312 IIVKA-GFDCYDFIQATIIHFYAACGRINLARLQFE----LGIKDHIASWNALIAGFIRN 366
+ K + A ++ GR++ A FE + +K W AL+ +
Sbjct: 542 CMSKVYAIEPLAEHYACMVDLLGRVGRLDEA---FEIVRGMKVKATAGVWGALLGACRAH 598
Query: 367 GMIEDAR 373
G +E R
Sbjct: 599 GNLELGR 605
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 66/147 (44%), Gaps = 31/147 (21%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
+L+ L C+ A+ G Q+H ++ K G + + N+LI +YAKCG I +A +F+
Sbjct: 416 QLSFACGLSSCATIAALQVGNQLHQVVVKGGYLNYLVVNNALITMYAKCGRILEAGLVFN 475
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
D ++ N +I GY A N +EAL++
Sbjct: 476 GICHADVISWNSLIGGY-------------------------------AINGYGKEALKL 504
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLG 169
F +M G+ P+EVT ++S+ H G
Sbjct: 505 FEEMASEGMAPDEVTFIGILSACNHAG 531
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 106/230 (46%), Gaps = 21/230 (9%)
Query: 379 MQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG 438
M +++ ++++MIS YA+N + N A LF M + N ++ ++ SG L G
Sbjct: 1 MAEKNTVTYNSMISVYAKNGRINAARNLFDKM----PRRNLVSWNTMV-----SGYLHNG 51
Query: 439 RWAHEYVLNNSITLNDNLSAAI-IDMYAKCGSINTAFEVFYHIR-DRTTSVSPWNAIICG 496
++ Y L + D S + I Y + G + A E+F + V+ WNA+I G
Sbjct: 52 KFDEAYKLFVIMPRRDLFSWTLMITCYTRNGEVEKARELFDSLPCSYRKGVACWNAMISG 111
Query: 497 LAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEP 556
G N +++ ++ +N+ I++ +L+ + LG +F M E
Sbjct: 112 YVKKGRVNEAKRLFDEMPVKNL----ISWNSMLAGYTQNRKMRLGLEFFNEMD-----ER 162
Query: 557 DLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNV 606
D+ + MVD + G L+ A + + K +VV W T+L+ +GN+
Sbjct: 163 DVVSWNLMVDGFIQVGDLDSAWKFFQE-TQKPNVVSWVTMLSGFARNGNI 211
>gi|328774759|gb|AEB39779.1| pentatricopeptide repeat protein 98 [Funaria hygrometrica]
Length = 980
Score = 348 bits (892), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 205/645 (31%), Positives = 333/645 (51%), Gaps = 102/645 (15%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
++A VS L+ C+ A+ QG+++H+ + + GL++ ++ +L+++Y KCG
Sbjct: 306 KVAFVSLLKACNHPEALEQGKRVHARMKEVGLDTEIYVGTALLSMYTKCG---------- 355
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+ DA EVF+ + VS+T+MI GFAQ+ EA
Sbjct: 356 ---------------------SMEDALEVFNLVKGRNVVSWTAMIAGFAQHGRMEEAFLF 394
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVI---ISTNLLNM 199
F M G+ PN VT S++ + + + R +H +IK G++ + T LL+M
Sbjct: 395 FNKMIESGIEPNRVTFMSILGACSRPSALKQGRQIHDRIIKA---GYITDDRVRTALLSM 451
Query: 200 YCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMI 259
Y C SL++AR+ +FERI ++VV+W MI
Sbjct: 452 YAKCGSLMDARN-------------------------------VFERISKQNVVAWNAMI 480
Query: 260 DGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFD 319
Y+Q E+ A+ ++A+L +GI P+ +++ C A G + S+I++AGF+
Sbjct: 481 TAYVQHEKYDNAVATFQALLKEGIKPDSSTFTSILNVCKSPDALELGKWVQSLIIRAGFE 540
Query: 320 CYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNM 379
+L I+ NAL++ F+ G + A LFN+M
Sbjct: 541 S-------------------------DLHIR------NALVSMFVNCGDLMSAMNLFNDM 569
Query: 380 QKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGR 439
+RD+ SW+ +I+G+ Q+ + A + F M ++GVKP++IT + A AS L EGR
Sbjct: 570 PERDLVSWNTIIAGFVQHGENQFAFDYFKMMQESGVKPDQITFTGLLNACASPEALTEGR 629
Query: 440 WAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAM 499
H + ++ + + +I MY KCGSI+ A VF+++ + +V W ++I G A
Sbjct: 630 RLHALITEAALDCDVVVGTGLISMYTKCGSIDDAHLVFHNLPKK--NVYSWTSMITGYAQ 687
Query: 500 HGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLK 559
HG L+++ +++ +K + ITF+G LS C HAGL+ G +F+SMK +N+EP ++
Sbjct: 688 HGRGKEALELFCQMQQEGVKPDWITFVGALSACAHAGLIKEGLHHFESMKD-FNIEPRME 746
Query: 560 HYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGL 619
HYGCMVDL GRAG L +A E I M +K D +WG LL A ++H +VE+ E+ A+ L
Sbjct: 747 HYGCMVDLFGRAGLLHEAVEFINKMQVKPDSRLWGALLGACQVHLDVELAEKVAQKKLEL 806
Query: 620 QPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
P+ V+LSNIYA AG W++ +RK M D G+ + PG S +
Sbjct: 807 DPNDDGVYVILSNIYAAAGMWKEVTKMRKVMLDRGVVKKPGQSWI 851
Score = 211 bits (537), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 140/577 (24%), Positives = 254/577 (44%), Gaps = 97/577 (16%)
Query: 28 SALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTL 87
S L+ C H + G++IH+ I S ++ + F+ N LI++YAKCG
Sbjct: 109 SLLQLCIKHKNLGDGERIHNHIKFSKIQPDIFMWNMLISMYAKCG--------------- 153
Query: 88 DPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMR 147
N A+++FD+ P K S+ ++ G+ Q+ + EA + M
Sbjct: 154 ----------------NTNSAKQIFDEMPDKDVYSWNLLLGGYVQHRRYEEAFRLHEQMV 197
Query: 148 ILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLV 207
GV P++ T ++++ + + L L++ D + + T L+NM+ C +
Sbjct: 198 QDGVKPDKYTFVYMLNACADAKNVDKGGELFSLILNAGWDTDLFVGTALINMHIKCGGVD 257
Query: 208 EARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVER 267
+A +F+ + R++++W M+ G A+ +
Sbjct: 258 DALKVFNNLPRRDLITWTSMITGLARH-------------------------------RQ 286
Query: 268 LSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQAT 327
+A +++ M +G+ P+ V V L+ AC A +G ++H+ + + G D ++
Sbjct: 287 FKQACNLFQVMEEEGVQPDKVAFVSLLKACNHPEALEQGKRVHARMKEVGLDTEIYVGTA 346
Query: 328 IIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSW 387
++ Y CG + A F L ++ SW A+IAGF ++G +E+A FN
Sbjct: 347 LLSMYTKCGSMEDALEVFNLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFNK--------- 397
Query: 388 SAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLN 447
M+++G++PN +T +S+ A + LK+GR H+ ++
Sbjct: 398 ----------------------MIESGIEPNRVTFMSILGACSRPSALKQGRQIHDRIIK 435
Query: 448 NSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTL 507
+D + A++ MYAKCGS+ A VF I + +V WNA+I H + +
Sbjct: 436 AGYITDDRVRTALLSMYAKCGSLMDARNVFERISKQ--NVVAWNAMITAYVQHEKYDNAV 493
Query: 508 KIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDL 567
+ L K IK +S TF +L+ C ++LG ++ +S+ E DL +V +
Sbjct: 494 ATFQALLKEGIKPDSSTFTSILNVCKSPDALELG-KWVQSLIIRAGFESDLHIRNALVSM 552
Query: 568 LGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHG 604
G L A + MP + D+V W T++A HG
Sbjct: 553 FVNCGDLMSAMNLFNDMPER-DLVSWNTIIAGFVQHG 588
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 134/259 (51%), Gaps = 4/259 (1%)
Query: 349 IKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFH 408
I+ I WN LI+ + + G A+Q+F+ M +DVYSW+ ++ GY Q+ + A L
Sbjct: 135 IQPDIFMWNMLISMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGYVQHRRYEEAFRLHE 194
Query: 409 GMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCG 468
MV GVKP++ T V + A A + + +G +LN + + A+I+M+ KCG
Sbjct: 195 QMVQDGVKPDKYTFVYMLNACADAKNVDKGGELFSLILNAGWDTDLFVGTALINMHIKCG 254
Query: 469 SINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGV 528
++ A +VF ++ R + W ++I GLA H ++ +E+ ++ + + F+ +
Sbjct: 255 GVDDALKVFNNLPRR--DLITWTSMITGLARHRQFKQACNLFQVMEEEGVQPDKVAFVSL 312
Query: 529 LSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKA 588
L C H ++ G+R MK V ++ ++ ++ + + G +EDA EV + +
Sbjct: 313 LKACNHPEALEQGKRVHARMKEV-GLDTEIYVGTALLSMYTKCGSMEDALEVFNLVKGR- 370
Query: 589 DVVIWGTLLAASRIHGNVE 607
+VV W ++A HG +E
Sbjct: 371 NVVSWTAMIAGFAQHGRME 389
>gi|449526834|ref|XP_004170418.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 348 bits (892), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 183/455 (40%), Positives = 259/455 (56%), Gaps = 33/455 (7%)
Query: 238 ELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISAC 297
+ A ++F IP+ +V W +I G L+ +L +A+ Y M+ D PN L AC
Sbjct: 84 DFALKVFSSIPNPNVFIWNIVIKGCLENNKLFKAIYFYGRMVIDA-RPNKFTYPTLFKAC 142
Query: 298 GRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKD------ 351
A A EG QIH +VK G I++ I YA+ GR+ AR F G D
Sbjct: 143 SVAQAVQEGRQIHGHVVKHGIGSDVHIKSAGIQMYASFGRLEDARKMFYSGESDVVCWNT 202
Query: 352 ------------------------HIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSW 387
+I SWN +I G + G + DAR+LF+ M +RD SW
Sbjct: 203 MIDGYLKCGVLEAAKGLFAQMPVKNIGSWNVMINGLAKGGNLGDARKLFDEMSERDEISW 262
Query: 388 SAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLN 447
S+M+ GY + ALE+F M +P + SV A ++ G + +GRW H Y+
Sbjct: 263 SSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKR 322
Query: 448 NSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTL 507
NSI L+ L A++DMYAKCG ++ +EVF +++R + WNA+I GLA+HG A L
Sbjct: 323 NSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKER--EIFTWNAMIGGLAIHGRAEDAL 380
Query: 508 KIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDL 567
+++S L++ +K N IT +GVL+ C HAG VD G R F++M+ Y V+P+L+HYGCMVDL
Sbjct: 381 ELFSKLQEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTMREFYGVDPELEHYGCMVDL 440
Query: 568 LGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSR 627
LGR+G +AE++I SMPMK + +WG LL A RIHGN ++ ER K L L+P +
Sbjct: 441 LGRSGLFSEAEDLINSMPMKPNAAVWGALLGACRIHGNFDLAERVGKILLELEPQNSGRY 500
Query: 628 VLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
VLLSNIYA GR++D IRK M++ G+K +PG S
Sbjct: 501 VLLSNIYAKVGRFDDVSKIRKLMKNRGIKTVPGVS 535
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 125/526 (23%), Positives = 232/526 (44%), Gaps = 56/526 (10%)
Query: 6 FHSVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLI 65
F V S + N+ S V L + ++ Q+H+L+ +SG + ++ +L+
Sbjct: 13 FKPVDFSAEKNIPTSKLPQKTVLKLFDSKSITSLQYLTQLHALVLRSGHFQDHYVSGALL 72
Query: 66 NLYAKCGL--ISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDA-----REVFDKTPIK 118
YA A +F S + NI+I G + N++L A R V D P K
Sbjct: 73 KCYANPHFSNFDFALKVFSSIPNPNVFIWNIVIKGCLENNKLFKAIYFYGRMVIDARPNK 132
Query: 119 CCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLH 178
+Y ++ + +E ++ + G+ + ++ I G + + R
Sbjct: 133 --FTYPTLFKACSVAQAVQEGRQIHGHVVKHGIGSDVHIKSAGIQMYASFGRLEDAR--- 187
Query: 179 GLVIKLMIDGF--VIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGL 236
K+ G V+ +++ Y C L A+ LF +M +NI SWNVM+NG AK G
Sbjct: 188 ----KMFYSGESDVVCWNTMIDGYLKCGVLEAAKGLFAQMPVKNIGSWNVMINGLAKGGN 243
Query: 237 VELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISA 296
+ AR+LF+ + +D +SW +M+DGY+ R EAL +++ M + P ++ +++A
Sbjct: 244 LGDARKLFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLAA 303
Query: 297 CGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASW 356
C A +G +H+ + + + ++ YA CGR+++ FE + I +W
Sbjct: 304 CSNIGAIDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFTW 363
Query: 357 NALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVK 416
NA+I G +G EDA +LF+ +Q + +K
Sbjct: 364 NAMIGGLAIHGRAEDALELFSKLQ-------------------------------EGRMK 392
Query: 417 PNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLS--AAIIDMYAKCGSINTAF 474
PN IT+V V A A +G + +G + + ++ L ++D+ + G + A
Sbjct: 393 PNGITLVGVLTACAHAGFVDKGLRIFQ-TMREFYGVDPELEHYGCMVDLLGRSGLFSEAE 451
Query: 475 EVFYHIRDRTTSVSPWNAIICGLAMHGDANLTL---KIYSDLEKRN 517
++ + + + + W A++ +HG+ +L KI +LE +N
Sbjct: 452 DLINSMPMKPNA-AVWGALLGACRIHGNFDLAERVGKILLELEPQN 496
>gi|413918370|gb|AFW58302.1| hypothetical protein ZEAMMB73_070872 [Zea mays]
Length = 688
Score = 348 bits (892), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 206/626 (32%), Positives = 327/626 (52%), Gaps = 42/626 (6%)
Query: 46 HSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRL 105
H + KS + TF+ N+L++ YA+ G + +A+ +FD + + N ++S Y R R
Sbjct: 40 HGCVLKSPVAGETFLLNTLVSTYARLGRLREARRVFDGIPLRNTFSYNALLSAYARLGRP 99
Query: 106 NDAREVFDKTPIKCCVSYTSMIMGFAQNDCWR--EALEVFRDMRILGVIPNEVTLASVIS 163
++AR +F+ P SY +++ A++ +AL M + N + AS +S
Sbjct: 100 DEARALFEAIPDPDQCSYNAVVAALARHGRGHAGDALRFLAAMHADDFVLNAYSFASALS 159
Query: 164 SSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVS 223
+ + +HGLV + V I T L++MY C V+AR +FD M
Sbjct: 160 ACAAEKDLRTGEQVHGLVARSPHADDVHIGTALVDMYAKCERPVDARRVFDAM------- 212
Query: 224 WNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGI 283
P ++VVSW ++I Y Q + EAL ++ M+ G
Sbjct: 213 ------------------------PERNVVSWNSLITCYEQNGPVGEALVLFVEMMATGF 248
Query: 284 APNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFI-QATIIHFYAACGRINLAR 342
P++V + ++SAC A EG Q+H+ +VK D + ++ YA CGR AR
Sbjct: 249 FPDEVTLSSVMSACAGLAAEREGRQVHAHMVKRDRLRDDMVLNNALVDMYAKCGRTWEAR 308
Query: 343 LQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNM 402
F+ + S +++AG+ ++ +EDA+ +F+ M +++V +W+ +I+ YAQN +
Sbjct: 309 CIFDSMPSRSVVSETSILAGYAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEE 368
Query: 403 ALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSA---- 458
A+ LF + + P T +V A + L+ G+ AH +VL + +
Sbjct: 369 AIRLFVQLKRDSIWPTHYTYGNVLNACGNIAVLQLGQQAHVHVLKEGFRFDFGPESDVFV 428
Query: 459 --AIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKR 516
+++DMY K GSI+ +VF + R +VS WNA+I G A +G A L ++ +
Sbjct: 429 GNSLVDMYLKTGSIDDGAKVFERMAARD-NVS-WNAMIVGYAQNGRAKDALHLFERMLCS 486
Query: 517 NIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLED 576
N +S+T IGVLS C H+GLVD G R+F M + + P HY CMVDLLGRAG L++
Sbjct: 487 NENPDSVTMIGVLSACGHSGLVDEGRRHFHFMTEDHGITPSRDHYTCMVDLLGRAGHLKE 546
Query: 577 AEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYAD 636
AEE+I+ MP + D V+W +LL A R+H NVE+GER A L L P + VLLSN+YA+
Sbjct: 547 AEELIKDMPTEPDSVLWASLLGACRLHKNVELGERTAGRLFELDPENSGPYVLLSNMYAE 606
Query: 637 AGRWEDAFSIRKEMRDCGMKRLPGFS 662
G+W D F +R+ M+D G+ + PG S
Sbjct: 607 MGKWADVFRVRRSMKDRGVSKQPGCS 632
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 133/483 (27%), Positives = 230/483 (47%), Gaps = 59/483 (12%)
Query: 25 ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSC 84
+ SAL C+A + G+Q+H L+ +S + I +L+++YAKC A+ +FD+
Sbjct: 153 SFASALSACAAEKDLRTGEQVHGLVARSPHADDVHIGTALVDMYAKCERPVDARRVFDA- 211
Query: 85 STLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFR 144
P + VS+ S+I + QN EAL +F
Sbjct: 212 ------------------------------MPERNVVSWNSLITCYEQNGPVGEALVLFV 241
Query: 145 DMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKL-MIDGFVIISTNLLNMYCVC 203
+M G P+EVTL+SV+S+ L E R +H ++K + ++++ L++MY C
Sbjct: 242 EMMATGFFPDEVTLSSVMSACAGLAAEREGRQVHAHMVKRDRLRDDMVLNNALVDMYAKC 301
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYL 263
EAR +FD M R++VS +L G+AK+ VE A+ +F ++ K+V++W +I Y
Sbjct: 302 GRTWEARCIFDSMPSRSVVSETSILAGYAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYA 361
Query: 264 QVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDF 323
Q EA+ ++ + D I P ++++ACG G Q H ++K GF
Sbjct: 362 QNGEEEEAIRLFVQLKRDSIWPTHYTYGNVLNACGNIAVLQLGQQAHVHVLKEGF----- 416
Query: 324 IQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRD 383
+F+ G + + N+L+ +++ G I+D ++F M RD
Sbjct: 417 --------------------RFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAARD 456
Query: 384 VYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHE 443
SW+AMI GYAQN + AL LF M+ + P+ +TM+ V A SG + EGR
Sbjct: 457 NVSWNAMIVGYAQNGRAKDALHLFERMLCSNENPDSVTMIGVLSACGHSGLVDEGRRHFH 516
Query: 444 YVL-NNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGD 502
++ ++ IT + + ++D+ + G + A E+ + SV W +++ +H +
Sbjct: 517 FMTEDHGITPSRDHYTCMVDLLGRAGHLKEAEELIKDMPTEPDSVL-WASLLGACRLHKN 575
Query: 503 ANL 505
L
Sbjct: 576 VEL 578
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 118/477 (24%), Positives = 202/477 (42%), Gaps = 72/477 (15%)
Query: 158 LASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMK 217
LA ++ S+ L G R HG V+K + G + L++ Y L EAR +FD +
Sbjct: 23 LADLLRSAPSLPG---ARAAHGCVLKSPVAGETFLLNTLVSTYARLGRLREARRVFDGIP 79
Query: 218 ERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVER--LSEALTMY 275
RN S+N +L+ +A+ G + AR LFE IP D S+ ++ + R +AL
Sbjct: 80 LRNTFSYNALLSAYARLGRPDEARALFEAIPDPDQCSYNAVVAALARHGRGHAGDALRFL 139
Query: 276 RAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAAC 335
AM D N +SAC G Q+H ++ ++ I ++ YA C
Sbjct: 140 AAMHADDFVLNAYSFASALSACAAEKDLRTGEQVHGLVARSPHADDVHIGTALVDMYAKC 199
Query: 336 GRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYA 395
R AR F+ + ++ SWN+LI + +NG + +
Sbjct: 200 ERPVDARRVFDAMPERNVVSWNSLITCYEQNGPVGE------------------------ 235
Query: 396 QNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDN 455
AL LF M+ G P+E+T+ SV A A +EGR H +++ +D
Sbjct: 236 -------ALVLFVEMMATGFFPDEVTLSSVMSACAGLAAEREGRQVHAHMVKRDRLRDDM 288
Query: 456 -LSAAIIDMYAKCGSINTAFEVFYHIRDRTT----------------------------- 485
L+ A++DMYAKCG A +F + R+
Sbjct: 289 VLNNALVDMYAKCGRTWEARCIFDSMPSRSVVSETSILAGYAKSANVEDAQVVFSQMVEK 348
Query: 486 SVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYF 545
+V WN +I A +G+ ++++ L++ +I T+ VL+ C + ++ LG++
Sbjct: 349 NVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSIWPTHYTYGNVLNACGNIAVLQLGQQAH 408
Query: 546 -----KSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLL 597
+ + + E D+ +VD+ + G ++D +V M + D V W ++
Sbjct: 409 VHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAAR-DNVSWNAMI 464
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 143/294 (48%), Gaps = 44/294 (14%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHS-LIFKSGLESNTFIQNSLINLYAKCGLISQAKSMF 81
E+ L S + C+ A +G+Q+H+ ++ + L + + N+L+++YAKCG +A+ +F
Sbjct: 252 EVTLSSVMSACAGLAAEREGRQVHAHMVKRDRLRDDMVLNNALVDMYAKCGRTWEARCIF 311
Query: 82 DSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALE 141
DS + V+ +++GY ++ + DA+ VF + K +++ +I +AQN EA+
Sbjct: 312 DSMPSRSVVSETSILAGYAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIR 371
Query: 142 VFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGF---------VII 192
+F ++ + P T +V+++ ++ + + H V+K +GF V +
Sbjct: 372 LFVQLKRDSIWPTHYTYGNVLNACGNIAVLQLGQQAHVHVLK---EGFRFDFGPESDVFV 428
Query: 193 STNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDV 252
+L++MY S+ + +F+ M R+ VSWN M+ G+A+ G + A LFER
Sbjct: 429 GNSLVDMYLKTGSIDDGAKVFERMAARDNVSWNAMIVGYAQNGRAKDALHLFER------ 482
Query: 253 VSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEG 306
MLC P+ V ++ ++SACG + EG
Sbjct: 483 -------------------------MLCSNENPDSVTMIGVLSACGHSGLVDEG 511
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 110/260 (42%), Gaps = 43/260 (16%)
Query: 37 IAVSQ-GQQIHSLIFKSGL------ESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
IAV Q GQQ H + K G ES+ F+ NSL+++Y K G I
Sbjct: 398 IAVLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSI--------------- 442
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
+D +VF++ + VS+ +MI+G+AQN ++AL +F M
Sbjct: 443 ----------------DDGAKVFERMAARDNVSWNAMIVGYAQNGRAKDALHLFERMLCS 486
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRM-LHGLVIKLMIDGFVIISTNLLNMYCVCSSLVE 208
P+ VT+ V+S+ H G + E R H + I T ++++ L E
Sbjct: 487 NENPDSVTMIGVLSACGHSGLVDEGRRHFHFMTEDHGITPSRDHYTCMVDLLGRAGHLKE 546
Query: 209 ARSLFDEMK-ERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMI---DGYLQ 264
A L +M E + V W +L VEL R+ D + G + + Y +
Sbjct: 547 AEELIKDMPTEPDSVLWASLLGACRLHKNVELGERTAGRLFELDPENSGPYVLLSNMYAE 606
Query: 265 VERLSEALTMYRAMLCDGIA 284
+ + ++ + R+M G++
Sbjct: 607 MGKWADVFRVRRSMKDRGVS 626
>gi|225459736|ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
Length = 758
Score = 347 bits (891), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 206/637 (32%), Positives = 326/637 (51%), Gaps = 41/637 (6%)
Query: 34 SAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACN 93
S ++SQ +Q H+ I K+GL ++T + L++ YA
Sbjct: 24 STTASLSQTRQAHAHILKTGLFNDTHLATKLLSHYAN----------------------- 60
Query: 94 IMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIP 153
N DA V D P S++++I F++ + AL F M G++P
Sbjct: 61 --------NMCFADATLVLDLVPEPNVFSFSTLIYAFSKFHQFHHALSTFSQMLTRGLMP 112
Query: 154 NEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLF 213
+ L S + + L + R +HG+ D + ++L++MY C+ + +A +F
Sbjct: 113 DNRVLPSAVKACAGLSALKPARQVHGIASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVF 172
Query: 214 DEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDV----VSWGTMIDGYLQVERLS 269
D M E ++VSW+ ++ +A+ G V+ A+ LF + V +SW MI G+ S
Sbjct: 173 DRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYS 232
Query: 270 EALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATII 329
EA+ M+ M G P+ I ++ A G G+ IH ++K G + + +I
Sbjct: 233 EAVLMFLDMHLRGFEPDGTTISSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSALI 292
Query: 330 HFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKR----DVY 385
Y C + F+ + S NA I G RNG +E + +LF ++ + +V
Sbjct: 293 DMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNVV 352
Query: 386 SWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYV 445
SW++MI+ +QN + ALELF M AGVKPN +T+ + A + L G+ AH +
Sbjct: 353 SWTSMIACCSQNGRDIEALELFREMQIAGVKPNSVTIPCLLPACGNIAALMHGKAAHCFS 412
Query: 446 LNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANL 505
L I+ + + +A+IDMYAKCG I + F I T ++ WNA+I G AMHG A
Sbjct: 413 LRRGISTDVYVGSALIDMYAKCGRIQASRICFDGIP--TKNLVCWNAVIAGYAMHGKAKE 470
Query: 506 TLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMV 565
++I+ +++ K + I+F VLS C +GL + G YF SM S Y +E ++HY CMV
Sbjct: 471 AMEIFDLMQRSGQKPDIISFTCVLSACSQSGLTEEGSYYFNSMSSKYGIEARVEHYACMV 530
Query: 566 DLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGP 625
LL RAG+LE A +IR MP+ D +WG LL++ R+H NV +GE AA+ L L+PS+
Sbjct: 531 TLLSRAGKLEQAYAMIRRMPVNPDACVWGALLSSCRVHNNVSLGEVAAEKLFELEPSNPG 590
Query: 626 SRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
+ +LLSNIYA G W + +R M++ G+++ PG S
Sbjct: 591 NYILLSNIYASKGMWNEVNRVRDMMKNKGLRKNPGCS 627
Score = 199 bits (505), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 134/493 (27%), Positives = 239/493 (48%), Gaps = 49/493 (9%)
Query: 26 LVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCS 85
L SA++ C+ A+ +Q+H + SG +S++F+Q+SL+++Y KC I A +FD
Sbjct: 117 LPSAVKACAGLSALKPARQVHGIASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMF 176
Query: 86 TLDPVACNIMISGYIRNDRLNDAREVF----DKTPIKCCVSYTSMIMGFAQNDCWREALE 141
D V+ + +++ Y R +++A+ +F D +S+ MI GF + + EA+
Sbjct: 177 EPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVL 236
Query: 142 VFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYC 201
+F DM + G P+ T++SV+ + L + ++HG VIK + +S+ L++MY
Sbjct: 237 MFLDMHLRGFEPDGTTISSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYG 296
Query: 202 VCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSK----DVVSWGT 257
CS E +FD+M ++ S N + G ++ G VE + LF ++ + +VVSW +
Sbjct: 297 KCSCTSEMSQVFDQMDHMDVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTS 356
Query: 258 MIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAG 317
MI Q R EAL ++R M G+ PN V I L+ ACG A G H ++ G
Sbjct: 357 MIACCSQNGRDIEALELFREMQIAGVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRG 416
Query: 318 FDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFN 377
++ + +I YA CGRI +R+ F+ ++ WNA+IAG+ +G ++A ++F+
Sbjct: 417 ISTDVYVGSALIDMYAKCGRIQASRICFDGIPTKNLVCWNAVIAGYAMHGKAKEAMEIFD 476
Query: 378 NMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKE 437
MQ+ +G KP+ I+ V A + SG +E
Sbjct: 477 LMQR-------------------------------SGQKPDIISFTCVLSACSQSGLTEE 505
Query: 438 GRWAHEYVLNN-SITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSP----WNA 492
G + + + I A ++ + ++ G + A+ + R V+P W A
Sbjct: 506 GSYYFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYAMI-----RRMPVNPDACVWGA 560
Query: 493 IICGLAMHGDANL 505
++ +H + +L
Sbjct: 561 LLSSCRVHNNVSL 573
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 85/199 (42%), Gaps = 8/199 (4%)
Query: 427 CAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTS 486
C +++ +L + R AH ++L + + +L+ ++ YA A V + + +
Sbjct: 21 CLNSTTASLSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPE--PN 78
Query: 487 VSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGE-RYF 545
V ++ +I + + L +S + R + ++ + C AGL L R
Sbjct: 79 VFSFSTLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKAC--AGLSALKPARQV 136
Query: 546 KSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGN 605
+ SV + D +V + + Q+ DA V M + DVV W L+AA G
Sbjct: 137 HGIASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRM-FEPDVVSWSALVAAYARQGC 195
Query: 606 VEVGERAAKSL--AGLQPS 622
V+ +R + +G+QP+
Sbjct: 196 VDEAKRLFSEMGDSGVQPN 214
>gi|15220337|ref|NP_172596.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122213654|sp|Q3E6Q1.1|PPR32_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g11290
gi|332190592|gb|AEE28713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 809
Score = 347 bits (891), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 209/635 (32%), Positives = 321/635 (50%), Gaps = 95/635 (14%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
L+ C + G++IH L+ KSG + F L N+YAKC
Sbjct: 142 LKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKC------------------ 183
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
++N+AR+VFD+ P + VS+ +++ G++QN R ALE+ + M
Sbjct: 184 -------------RQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEE 230
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
+ P+ +T+ SV+ + L I + +HG ++ D V IST L++MY C SL
Sbjct: 231 NLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSL--- 287
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLS 269
E AR+LF+ + ++VVSW +MID Y+Q E
Sbjct: 288 ----------------------------ETARQLFDGMLERNVVSWNSMIDAYVQNENPK 319
Query: 270 EALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATII 329
EA+ +++ ML +G+ P DV ++ + AC D D + I
Sbjct: 320 EAMLIFQKMLDEGVKPTDVSVMGALHACA--------------------DLGDLERGRFI 359
Query: 330 HFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSA 389
H +L ELG+ +++ N+LI+ + + ++ A +F +Q R + SW+A
Sbjct: 360 H-----------KLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNA 408
Query: 390 MISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNS 449
MI G+AQN +P AL F M VKP+ T VSV AIA +W H V+ +
Sbjct: 409 MILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSC 468
Query: 450 ITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKI 509
+ N ++ A++DMYAKCG+I A +F + +R V+ WNA+I G HG L++
Sbjct: 469 LDKNVFVTTALVDMYAKCGAIMIARLIFDMMSER--HVTTWNAMIDGYGTHGFGKAALEL 526
Query: 510 YSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLG 569
+ +++K IK N +TF+ V+S C H+GLV+ G + F MK Y++E + HYG MVDLLG
Sbjct: 527 FEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLG 586
Query: 570 RAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVL 629
RAG+L +A + I MP+K V ++G +L A +IH NV E+AA+ L L P G VL
Sbjct: 587 RAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVL 646
Query: 630 LSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
L+NIY A WE +R M G+++ PG S V
Sbjct: 647 LANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMV 681
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 146/605 (24%), Positives = 264/605 (43%), Gaps = 106/605 (17%)
Query: 2 PLDHFHSVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQ 61
P H H F S++ + + YE L CS+ + + +QI L+FK+GL F Q
Sbjct: 18 PSRHRH--FLSERNYIPANVYEHPAALLLERCSS---LKELRQILPLVFKNGLYQEHFFQ 72
Query: 62 NSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCV 121
L++L+ + G + +A +F +P+ + +LN V
Sbjct: 73 TKLVSLFCRYGSVDEAARVF------EPI-----------DSKLN--------------V 101
Query: 122 SYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLV 181
Y +M+ GFA+ +AL+ F MR V P ++ + + +HGL+
Sbjct: 102 LYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLL 161
Query: 182 IK--LMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVEL 239
+K +D F + T L NMY C + EAR +FD M ER++VSWN ++ G+++ G+ +
Sbjct: 162 VKSGFSLDLFAM--TGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARM 219
Query: 240 ARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGR 299
AL M ++M + + P+ + IV ++ A
Sbjct: 220 -------------------------------ALEMVKSMCEENLKPSFITIVSVLPAVSA 248
Query: 300 AMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNAL 359
G +IH +++GFD I ++ YA CG + AR F+ ++ ++ SWN++
Sbjct: 249 LRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSM 308
Query: 360 IAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNE 419
I Y QNE P A+ +F M+D GVKP +
Sbjct: 309 I-------------------------------DAYVQNENPKEAMLIFQKMLDEGVKPTD 337
Query: 420 ITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYH 479
++++ A A G L+ GR+ H+ + + N ++ ++I MY KC ++TA +F
Sbjct: 338 VSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGK 397
Query: 480 IRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVD 539
++ RT + WNA+I G A +G L +S + R +K ++ T++ V++ +
Sbjct: 398 LQSRT--LVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITH 455
Query: 540 LGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAA 599
++ + ++ ++ +VD+ + G + A +I M + V W ++
Sbjct: 456 HA-KWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIA-RLIFDMMSERHVTTWNAMIDG 513
Query: 600 SRIHG 604
HG
Sbjct: 514 YGTHG 518
Score = 171 bits (434), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 123/495 (24%), Positives = 219/495 (44%), Gaps = 95/495 (19%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+ +VS L SA +S G++IH +SG +S I +L+++YAKCG + A+ +FD
Sbjct: 237 ITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDG 296
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
+ V+ N MI Y+ QN+ +EA+ +F
Sbjct: 297 MLERNVVSWNSMIDAYV-------------------------------QNENPKEAMLIF 325
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
+ M GV P +V++ + + LG + R +H L ++L +D V + +L++MYC C
Sbjct: 326 QKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKC 385
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYL 263
+ A S+F +++ R +VSWN M+ GFA+ G
Sbjct: 386 KEVDTAASMFGKLQSRTLVSWNAMILGFAQNG---------------------------- 417
Query: 264 QVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDF 323
R +AL + M + P+ V +I+A IH +++++ D F
Sbjct: 418 ---RPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVF 474
Query: 324 IQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRD 383
+ ++ YA CG I +ARL F++ + H+ +WNA+I G+ +G + A +LF MQK
Sbjct: 475 VTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQK-- 532
Query: 384 VYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG-RWAH 442
+KPN +T +SV A + SG ++ G + +
Sbjct: 533 -----------------------------GTIKPNGVTFLSVISACSHSGLVEAGLKCFY 563
Query: 443 EYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGD 502
N SI L+ + A++D+ + G +N A++ + + +V+ + A++ +H +
Sbjct: 564 MMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVK-PAVNVYGAMLGACQIHKN 622
Query: 503 ANLTLKIYSDLEKRN 517
N K L + N
Sbjct: 623 VNFAEKAAERLFELN 637
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 135/299 (45%), Gaps = 73/299 (24%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
+++++ AL C+ + +G+ IH L + GL+ N + NSLI++Y KC + A SMF
Sbjct: 337 DVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFG 396
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+ V+ N MI G+ +N R PI +AL
Sbjct: 397 KLQSRTLVSWNAMILGFAQNGR-----------PI--------------------DALNY 425
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
F MR V P+ T SVI++ L + +HG+V++ +D V ++T L++MY
Sbjct: 426 FSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAK 485
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
C +++ AR +FD M ER++ +WN M++G+ G + A ELFE + GT
Sbjct: 486 CGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQK------GT----- 534
Query: 263 LQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCY 321
I PN V + +ISAC HS +V+AG C+
Sbjct: 535 --------------------IKPNGVTFLSVISACS-----------HSGLVEAGLKCF 562
>gi|15237421|ref|NP_197188.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174141|sp|Q9LFL5.1|PP390_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g16860
gi|9755687|emb|CAC01699.1| putative protein [Arabidopsis thaliana]
gi|332004967|gb|AED92350.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 850
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 216/645 (33%), Positives = 326/645 (50%), Gaps = 67/645 (10%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
+ C +V G+ H+L +G SN F+ N+L+ +Y++C
Sbjct: 134 FKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRC------------------ 175
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDM-RI 148
L+DAR+VFD+ + VS+ S+I +A+ + ALE+F M
Sbjct: 176 -------------RSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNE 222
Query: 149 LGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVE 208
G P+ +TL +V+ LG + LH + + + + L++MY C + E
Sbjct: 223 FGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDE 282
Query: 209 ARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSK----DVVSWGTMIDGYLQ 264
A ++F M +++VSWN M+ G+++ G E A LFE++ + DVV+W I GY Q
Sbjct: 283 ANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQ 342
Query: 265 VERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFI 324
EAL + R ML GI PN+V ++ ++S C A G +IH +K D
Sbjct: 343 RGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDL---- 398
Query: 325 QATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNM--QKR 382
R N G D N LI + + ++ AR +F+++ ++R
Sbjct: 399 ------------RKN--------GHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKER 438
Query: 383 DVYSWSAMISGYAQNEQPNMALELFHGMV--DAGVKPNEITMVSVFCAIASSGTLKEGRW 440
DV +W+ MI GY+Q+ N ALEL M D +PN T+ A AS L+ G+
Sbjct: 439 DVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQ 498
Query: 441 AHEYVLNNSI-TLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAM 499
H Y L N + +S +IDMYAKCGSI+ A VF ++ + W +++ G M
Sbjct: 499 IHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVT--WTSLMTGYGM 556
Query: 500 HGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLK 559
HG L I+ ++ + KL+ +T + VL C H+G++D G YF MK+V+ V P +
Sbjct: 557 HGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPE 616
Query: 560 HYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGL 619
HY C+VDLLGRAG+L A +I MPM+ V+W L+ RIHG VE+GE AA+ + L
Sbjct: 617 HYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITEL 676
Query: 620 QPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
+H S LLSN+YA+AGRW+D IR MR G+K+ PG S V
Sbjct: 677 ASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWV 721
Score = 223 bits (567), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 169/594 (28%), Positives = 273/594 (45%), Gaps = 65/594 (10%)
Query: 48 LIFKSGLESNTFIQNSLINLYA---------KCGLISQAKSMFDSCSTLDPVACNI---M 95
LI + +S+ +I+ SL + A KC ISQ K + + + N+ +
Sbjct: 6 LIPNAAAKSHQYIKVSLFSTSAPEITPPFIHKCKTISQVKLIHQKLLSFGILTLNLTSHL 65
Query: 96 ISGYIRNDRLNDAREVFDKTPIKCCVSY--TSMIMGFAQNDCWREALEVFRDMRILGVIP 153
IS YI L+ A + + P Y S+I + N C + L +F M L P
Sbjct: 66 ISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTP 125
Query: 154 NEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLF 213
+ T V + + + H L + V + L+ MY C SL +AR +F
Sbjct: 126 DNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVF 185
Query: 214 DEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALT 273
DEM ++VSWN ++ +AK G ++A E+F R+ ++
Sbjct: 186 DEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNE----------------------- 222
Query: 274 MYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYA 333
G P+++ +V+++ C G Q+H V + F+ ++ YA
Sbjct: 223 -------FGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYA 275
Query: 334 ACGRINLARLQFE-LGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ----KRDVYSWS 388
CG ++ A F + +KD + SWNA++AG+ + G EDA +LF MQ K DV +WS
Sbjct: 276 KCGMMDEANTVFSNMSVKD-VVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWS 334
Query: 389 AMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNN 448
A ISGYAQ AL + M+ +G+KPNE+T++SV AS G L G+ H Y +
Sbjct: 335 AAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKY 394
Query: 449 SITLNDN-------LSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHG 501
I L N + +IDMYAKC ++TA +F + + V W +I G + HG
Sbjct: 395 PIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHG 454
Query: 502 DANLTLKIYSDL--EKRNIKLNSITFIGVLSTCCHAGLVDLGER-YFKSMKSVYNVEPDL 558
DAN L++ S++ E + N+ T L C + +G++ + ++++ N P L
Sbjct: 455 DANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVP-L 513
Query: 559 KHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERA 612
C++D+ + G + DA V +M M + V W +L+ +HG GE A
Sbjct: 514 FVSNCLIDMYAKCGSISDARLVFDNM-MAKNEVTWTSLMTGYGMHG---YGEEA 563
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 130/497 (26%), Positives = 223/497 (44%), Gaps = 76/497 (15%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+ LV+ L C++ S G+Q+H S + N F+ N L+++YAKCG++ +A ++F +
Sbjct: 230 ITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSN 289
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDK---TPIKC-CVSYTSMIMGFAQNDCWREA 139
S D V+ N M++GY + R DA +F+K IK V++++ I G+AQ EA
Sbjct: 290 MSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEA 349
Query: 140 LEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMID-------GFVII 192
L V R M G+ PNEVTL SV+S +G + + +H IK ID ++
Sbjct: 350 LGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMV 409
Query: 193 STNLLNMYCVCSSLVEARSLFDEM--KERNIVSWNVMLNGFAKAGLVELARELFERIPSK 250
L++MY C + AR++FD + KER++V+W VM+ G+++ G A EL + +
Sbjct: 410 INQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEE 469
Query: 251 DVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIH 310
D + PN I + AC A G QIH
Sbjct: 470 DCQT-----------------------------RPNAFTISCALVACASLAALRIGKQIH 500
Query: 311 SIIVKAGFDCYD-FIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMI 369
+ ++ + F+ +I YA CG I+ ARL F+ + + +W +L+ G+ +G
Sbjct: 501 AYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYG 560
Query: 370 EDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAI 429
E+A +F+ M++ G K + +T++ V A
Sbjct: 561 EEALGIFDEMRR-------------------------------IGFKLDGVTLLVVLYAC 589
Query: 430 ASSGTLKEG-RWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVS 488
+ SG + +G + + ++ A ++D+ + G +N A + + V
Sbjct: 590 SHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVV 649
Query: 489 PWNAIICGLAMHGDANL 505
W A + +HG L
Sbjct: 650 -WVAFLSCCRIHGKVEL 665
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 110/235 (46%), Gaps = 39/235 (16%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSL-------IFKSGLESNTFIQNSLINLYAKCGLIS 75
E+ L+S L C++ A+ G++IH + K+G + N LI++YAKC +
Sbjct: 365 EVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVD 424
Query: 76 QAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDC 135
A++MFDS S + R+V V++T MI G++Q+
Sbjct: 425 TARAMFDSLSPKE--------------------RDV---------VTWTVMIGGYSQHGD 455
Query: 136 WREALEVFRDM--RILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIIS 193
+ALE+ +M PN T++ + + L + + +H ++ + +
Sbjct: 456 ANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFV 515
Query: 194 TN-LLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERI 247
+N L++MY C S+ +AR +FD M +N V+W ++ G+ G E A +F+ +
Sbjct: 516 SNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEM 570
>gi|326498517|dbj|BAJ98686.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 647
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 186/501 (37%), Positives = 281/501 (56%), Gaps = 34/501 (6%)
Query: 196 LLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNG------------------------- 230
L++MY VC L +AR +FD + VSWN +L
Sbjct: 144 LMHMYSVCGCLWDARRVFDAGPVWDAVSWNTILAAYVHAGDVDQAVGVFARMPKRNATAV 203
Query: 231 ------FAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIA 284
F + G+VE AR +F+ +D+ +W MI + + + +EAL M+ M +
Sbjct: 204 SSMVSLFGRRGMVEEARGVFDEAECRDIFTWTAMISCFERNDMFAEALHMFSCMRREMWP 263
Query: 285 PNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQ 344
++ ++V +++AC ++ G H ++++AG IQ +IH Y+ C + AR
Sbjct: 264 VDEALMVSVVAACAQSEVIRNGELCHGLVIRAGLCSLLNIQNVLIHMYSCCLDVVAARRL 323
Query: 345 FELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMAL 404
F+ G SWN++IAG+++NG +E+A LF+ M +D SWS MISG QN Q + AL
Sbjct: 324 FDSGDCLDQFSWNSMIAGYLKNGHVENAMTLFSAMPDKDNVSWSTMISGCVQNNQSSHAL 383
Query: 405 ELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMY 464
+F M GV+P+E+T+VSV A + L++G+ H+YV N + L ++IDMY
Sbjct: 384 TVFDNMRAQGVRPDEVTIVSVISACTNLSALEKGKSVHDYVRQNKCYITLVLGTSLIDMY 443
Query: 465 AKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKL-NSI 523
KCG + A +VF + ++ WNA+I GLAM+G +L+I+S++E + + N I
Sbjct: 444 MKCGYLEAAMDVFNIMEEKGAPC--WNAVIVGLAMNGLVTKSLEIFSEMEASSTAIPNEI 501
Query: 524 TFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRS 583
TF GVLS C HAGLV+ G +FK M+ Y + P+++HYGCMVDLLGRAG +++AE++I S
Sbjct: 502 TFTGVLSACRHAGLVEEGRHFFKLMQHKYQIVPNIRHYGCMVDLLGRAGYVKEAEDLIES 561
Query: 584 MPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDA 643
MPM DV WG LL A HG EVGER + L L P H + +LSNIYA G W+
Sbjct: 562 MPMSPDVPAWGALLGACWKHGENEVGERVGRKLVNLDPRHDGFQTMLSNIYAKEGMWQSV 621
Query: 644 FSIRKEMRDCGMKRLPGFSGV 664
+R M+ + ++ G+S V
Sbjct: 622 NDLRDSMKQRHVPKVSGYSVV 642
Score = 196 bits (498), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 136/506 (26%), Positives = 228/506 (45%), Gaps = 71/506 (14%)
Query: 33 CSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVAC 92
C+A VS+G+Q+ S + G + +++N+L+++Y+ CG + A+ +FD+ D V+
Sbjct: 113 CAARRDVSEGRQVQSHAIRHGFGDDLYLRNALMHMYSVCGCLWDARRVFDAGPVWDAVSW 172
Query: 93 NIMISGYI-------------------------------RNDRLNDAREVFDKTPIKCCV 121
N +++ Y+ R + +AR VFD+ +
Sbjct: 173 NTILAAYVHAGDVDQAVGVFARMPKRNATAVSSMVSLFGRRGMVEEARGVFDEAECRDIF 232
Query: 122 SYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLV 181
++T+MI F +ND + EAL +F MR +E + SV+++ I + HGLV
Sbjct: 233 TWTAMISCFERNDMFAEALHMFSCMRREMWPVDEALMVSVVAACAQSEVIRNGELCHGLV 292
Query: 182 IKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELAR 241
I+ + + I L++MY C +V AR LFD + SWN M+ G+ K G VE A
Sbjct: 293 IRAGLCSLLNIQNVLIHMYSCCLDVVAARRLFDSGDCLDQFSWNSMIAGYLKNGHVENAM 352
Query: 242 ELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAM 301
LF +P KD VSW TMI G +Q + S ALT++ M G+ P++V IV +ISAC
Sbjct: 353 TLFSAMPDKDNVSWSTMISGCVQNNQSSHALTVFDNMRAQGVRPDEVTIVSVISACTNLS 412
Query: 302 AFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIA 361
A +G +H + + + ++I Y CG + A F + + WNA+I
Sbjct: 413 ALEKGKSVHDYVRQNKCYITLVLGTSLIDMYMKCGYLEAAMDVFNIMEEKGAPCWNAVIV 472
Query: 362 GFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEIT 421
G NG++ + ++F+ M+ + PNEIT
Sbjct: 473 GLAMNGLVTKSLEIFSEME------------------------------ASSTAIPNEIT 502
Query: 422 MVSVFCAIASSGTLKEGR-----WAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEV 476
V A +G ++EGR H+Y I N ++D+ + G + A ++
Sbjct: 503 FTGVLSACRHAGLVEEGRHFFKLMQHKY----QIVPNIRHYGCMVDLLGRAGYVKEAEDL 558
Query: 477 FYHIRDRTTSVSPWNAIICGLAMHGD 502
+ + V W A++ HG+
Sbjct: 559 IESM-PMSPDVPAWGALLGACWKHGE 583
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 105/380 (27%), Positives = 177/380 (46%), Gaps = 64/380 (16%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E +VS + C+ + G+ H L+ ++GL S IQN LI++Y+ C + A+ +FD
Sbjct: 266 EALMVSVVAACAQSEVIRNGELCHGLVIRAGLCSLLNIQNVLIHMYSCCLDVVAARRLFD 325
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
S LD + N MI+GY++N + +A +F P K VS+++MI G QN+ AL V
Sbjct: 326 SGDCLDQFSWNSMIAGYLKNGHVENAMTLFSAMPDKDNVSWSTMISGCVQNNQSSHALTV 385
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
F +MR GV P+EVT+ SVIS+ +L + + + +H V + +++ T+L++MY
Sbjct: 386 FDNMRAQGVRPDEVTIVSVISACTNLSALEKGKSVHDYVRQNKCYITLVLGTSLIDMYMK 445
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
C L A +F+ M+E+ WN ++ G A GLV + E+F
Sbjct: 446 CGYLEAAMDVFNIMEEKGAPCWNAVIVGLAMNGLVTKSLEIFS----------------- 488
Query: 263 LQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD 322
++E S A+ PN++ ++SAC A EG
Sbjct: 489 -EMEASSTAI------------PNEITFTGVLSACRHAGLVEEGR--------------- 520
Query: 323 FIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ-K 381
HF+ +Q + I +I + ++ R G +++A L +M
Sbjct: 521 -------HFFKL--------MQHKYQIVPNIRHYGCMVDLLGRAGYVKEAEDLIESMPMS 565
Query: 382 RDVYSWSAMISG---YAQNE 398
DV +W A++ + +NE
Sbjct: 566 PDVPAWGALLGACWKHGENE 585
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 87/389 (22%), Positives = 160/389 (41%), Gaps = 74/389 (19%)
Query: 284 APNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARL 343
+P+ L +AC EG Q+ S ++ GF +++ ++H Y+ CG + AR
Sbjct: 100 SPDTYTHPILAAACAARRDVSEGRQVQSHAIRHGFGDDLYLRNALMHMYSVCGCLWDARR 159
Query: 344 QFELGIKDHIASWNALIAGFI-------------------------------RNGMIEDA 372
F+ G SWN ++A ++ R GM+E+A
Sbjct: 160 VFDAGPVWDAVSWNTILAAYVHAGDVDQAVGVFARMPKRNATAVSSMVSLFGRRGMVEEA 219
Query: 373 RQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASS 432
R +F+ + RD+++W+AMIS + +N+ AL +F M +E MVSV A A S
Sbjct: 220 RGVFDEAECRDIFTWTAMISCFERNDMFAEALHMFSCMRREMWPVDEALMVSVVAACAQS 279
Query: 433 GTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVF--------------- 477
++ G H V+ + N+ +I MY+ C + A +F
Sbjct: 280 EVIRNGELCHGLVIRAGLCSLLNIQNVLIHMYSCCLDVVAARRLFDSGDCLDQFSWNSMI 339
Query: 478 ------YHIRDRTTSVSP--------WNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSI 523
H+ + T S W+ +I G + ++ L ++ ++ + ++ + +
Sbjct: 340 AGYLKNGHVENAMTLFSAMPDKDNVSWSTMISGCVQNNQSSHALTVFDNMRAQGVRPDEV 399
Query: 524 TFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHY------GCMVDLLGRAGQLEDA 577
T + V+S C + ++ G KSV++ K Y ++D+ + G LE A
Sbjct: 400 TIVSVISACTNLSALEKG-------KSVHDYVRQNKCYITLVLGTSLIDMYMKCGYLEAA 452
Query: 578 EEVIRSMPMKADVVIWGTLLAASRIHGNV 606
+V M K W ++ ++G V
Sbjct: 453 MDVFNIMEEKG-APCWNAVIVGLAMNGLV 480
>gi|449455158|ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449470513|ref|XP_004152961.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
gi|449523079|ref|XP_004168552.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 733
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 203/622 (32%), Positives = 322/622 (51%), Gaps = 42/622 (6%)
Query: 52 SGLESNTFIQN-SLINLYAKCGLISQAKS----MFDSCSTLDPVACNIMISGYIRND--R 104
S L +N +N +++ KC Q K M + DP + + + + +
Sbjct: 15 STLNNNLLFRNHQILSTIDKCSSSKQLKEVHARMLRTGLFFDPFSASKLFTASALSSFST 74
Query: 105 LNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDM-RILGVIPNEVTLASVIS 163
L+ AR +FD+ P ++ ++I +A + ++ +F D+ +PN+ T VI
Sbjct: 75 LDYARNLFDQIPQPNLYTWNTLIRAYASSSDPFQSFVIFLDLLDKCEDLPNKFTFPFVIK 134
Query: 164 SSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVS 223
++ L +HG+ IKL + I +L+ Y C
Sbjct: 135 AASELKASRVGTAVHGMAIKLSFGMDLYILNSLVRFYGAC-------------------- 174
Query: 224 WNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGI 283
G + +A LF+ I KDVVSW +MI + Q +AL ++ M + +
Sbjct: 175 -----------GDLSMAERLFKGISCKDVVSWNSMISAFAQGNCPEDALELFLKMERENV 223
Query: 284 APNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARL 343
PN V +V ++SAC + + G + S I + G + ++ Y CG ++ A+
Sbjct: 224 MPNSVTMVGVLSACAKKLDLEFGRWVCSYIERKGIKVDLTLCNAMLDMYTKCGSVDDAQK 283
Query: 344 QFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMA 403
F+ + + SW ++ G+ + G + AR +FN M +++ +W+ +IS Y QN +P A
Sbjct: 284 LFDEMPERDVFSWTIMLDGYAKMGDYDAARLVFNAMPVKEIAAWNVLISAYEQNGKPKEA 343
Query: 404 LELFHGMVDAGV-KPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIID 462
L +F+ + + + KP+E+T+VS A A G + G W H Y+ I LN +L ++++D
Sbjct: 344 LAIFNELQLSKIAKPDEVTLVSTLSACAQLGAIDLGGWIHVYIKREGIVLNCHLISSLVD 403
Query: 463 MYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNS 522
MYAKCGS+ A EVFY + +R V W+A+I GL MHG + ++ ++++ +K NS
Sbjct: 404 MYAKCGSLEKALEVFYSVEERDVYV--WSAMIAGLGMHGRGKAAIDLFFEMQEAKVKPNS 461
Query: 523 ITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIR 582
+TF VL C HAGLVD G +F M+ VY V P++KHY CMVD+LGRAG LE+A E+I
Sbjct: 462 VTFTNVLCACSHAGLVDEGRVFFHEMEPVYGVVPEMKHYACMVDILGRAGFLEEAMELIN 521
Query: 583 SMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWED 642
M +WG LL A +H NVE+GE A+ L L+P + + VLLSNIYA GRWE
Sbjct: 522 EMSTTPSASVWGALLGACSLHMNVELGELASDQLLKLEPRNHGAIVLLSNIYAKTGRWEK 581
Query: 643 AFSIRKEMRDCGMKRLPGFSGV 664
+RK MRD +K+ PG S +
Sbjct: 582 VSELRKLMRDTELKKEPGCSSI 603
Score = 205 bits (522), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 142/486 (29%), Positives = 228/486 (46%), Gaps = 78/486 (16%)
Query: 42 GQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIR 101
G +H + K + +I NSL+ Y CG +S A+ +F S D V+ N MIS
Sbjct: 145 GTAVHGMAIKLSFGMDLYILNSLVRFYGACGDLSMAERLFKGISCKDVVSWNSMIS---- 200
Query: 102 NDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASV 161
FAQ +C +ALE+F M V+PN VT+ V
Sbjct: 201 ---------------------------AFAQGNCPEDALELFLKMERENVMPNSVTMVGV 233
Query: 162 ISSSVHL----GGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMK 217
+S+ G W C + IK+ + + +L+MY C S+ +A+ LFDEM
Sbjct: 234 LSACAKKLDLEFGRWVCSYIERKGIKVDL----TLCNAMLDMYTKCGSVDDAQKLFDEMP 289
Query: 218 ERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRA 277
ER++ SW +ML+G+AK G + AR +F +P K++ +W +I Y Q + EAL ++
Sbjct: 290 ERDVFSWTIMLDGYAKMGDYDAARLVFNAMPVKEIAAWNVLISAYEQNGKPKEALAIFNE 349
Query: 278 MLCDGIA-PNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACG 336
+ IA P++V +V +SAC + A G IH I + G + ++++ YA CG
Sbjct: 350 LQLSKIAKPDEVTLVSTLSACAQLGAIDLGGWIHVYIKREGIVLNCHLISSLVDMYAKCG 409
Query: 337 RINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQ 396
+E A ++F ++++RDVY WSAMI+G
Sbjct: 410 S-------------------------------LEKALEVFYSVEERDVYVWSAMIAGLGM 438
Query: 397 NEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGR-WAHEYVLNNSITLNDN 455
+ + A++LF M +A VKPN +T +V CA + +G + EGR + HE +
Sbjct: 439 HGRGKAAIDLFFEMQEAKVKPNSVTFTNVLCACSHAGLVDEGRVFFHEMEPVYGVVPEMK 498
Query: 456 LSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSD--- 512
A ++D+ + G + A E+ + T S S W A++ ++H + L ++ SD
Sbjct: 499 HYACMVDILGRAGFLEEAMELINEM-STTPSASVWGALLGACSLHMNVELG-ELASDQLL 556
Query: 513 -LEKRN 517
LE RN
Sbjct: 557 KLEPRN 562
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/395 (21%), Positives = 168/395 (42%), Gaps = 71/395 (17%)
Query: 2 PLDHFHSVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQ 61
P D ++ N+ + + +V L C+ + + G+ + S I + G++ + +
Sbjct: 208 PEDALELFLKMERENVMPNS--VTMVGVLSACAKKLDLEFGRWVCSYIERKGIKVDLTLC 265
Query: 62 NSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCV 121
N+++++Y KCG + A+ +FD D + IM+ GY + + AR VF+ P+K
Sbjct: 266 NAMLDMYTKCGSVDDAQKLFDEMPERDVFSWTIMLDGYAKMGDYDAARLVFNAMPVKEIA 325
Query: 122 SYTSMIMGFAQNDCWREALEVFRDMRILGVI-PNEVTLASVISSSVHLGGIWECRMLHGL 180
++ +I + QN +EAL +F ++++ + P+EVTL S +S+ LG I +H
Sbjct: 326 AWNVLISAYEQNGKPKEALAIFNELQLSKIAKPDEVTLVSTLSACAQLGAIDLGGWIHVY 385
Query: 181 VIKLMIDGFVI---ISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLV 237
+ + +G V+ + ++L++MY C SL +A +F ++ER++ W+ M+ G G
Sbjct: 386 IKR---EGIVLNCHLISSLVDMYAKCGSLEKALEVFYSVEERDVYVWSAMIAGLGMHG-- 440
Query: 238 ELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISAC 297
R A+ ++ M + PN V +++ AC
Sbjct: 441 -----------------------------RGKAAIDLFFEMQEAKVKPNSVTFTNVLCAC 471
Query: 298 GRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWN 357
A E GR+ ++ G+ + +
Sbjct: 472 SHAGLVDE------------------------------GRVFFHEMEPVYGVVPEMKHYA 501
Query: 358 ALIAGFIRNGMIEDARQLFNNMQKRDVYS-WSAMI 391
++ R G +E+A +L N M S W A++
Sbjct: 502 CMVDILGRAGFLEEAMELINEMSTTPSASVWGALL 536
>gi|225439588|ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Vitis vinifera]
Length = 686
Score = 347 bits (889), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 199/559 (35%), Positives = 297/559 (53%), Gaps = 64/559 (11%)
Query: 106 NDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSS 165
N R +F + + +MI G NDC+ +A+E + MR G +PN T V+ +
Sbjct: 63 NYTRFLFHQIKQPNIFLWNTMIRGLVSNDCFDDAIEFYGLMRSEGFLPNNFTFPFVLKAC 122
Query: 166 VHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWN 225
L + +H LV+K D V + T+L+ +Y
Sbjct: 123 ARLLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCLY------------------------- 157
Query: 226 VMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAP 285
AK G +E A ++F+ IP K+VVSW +I GY+ V + EA+ M+R +L +AP
Sbjct: 158 ------AKCGYLEDAHKVFDDIPDKNVVSWTAIISGYIGVGKFREAIDMFRRLLEMNLAP 211
Query: 286 NDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQF 345
+ IV ++SAC + G IH I++ G F+ +++ YA CG +
Sbjct: 212 DSFTIVRVLSACTQLGDLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNM------- 264
Query: 346 ELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALE 405
E AR +F+ M ++D+ SW AMI GYA N P A++
Sbjct: 265 ------------------------EKARSVFDGMPEKDIVSWGAMIQGYALNGLPKEAID 300
Query: 406 LFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYA 465
LF M VKP+ T+V V A A G L+ G W V N N L A+ID+YA
Sbjct: 301 LFLQMQRENVKPDCYTVVGVLSACARLGALELGEWVSGLVDRNEFLYNPVLGTALIDLYA 360
Query: 466 KCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITF 525
KCGS++ A+EVF ++++ V WNAII GLAM+G ++ ++ +EK IK + TF
Sbjct: 361 KCGSMSRAWEVFKGMKEKDRVV--WNAIISGLAMNGYVKISFGLFGQVEKLGIKPDGNTF 418
Query: 526 IGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMP 585
IG+L C HAGLVD G RYF SM +++ P ++HYGCMVDLLGRAG L++A ++IR+MP
Sbjct: 419 IGLLCGCTHAGLVDEGRRYFNSMYRFFSLTPSIEHYGCMVDLLGRAGLLDEAHQLIRNMP 478
Query: 586 MKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFS 645
M+A+ ++WG LL A RIH + ++ E A K L L+P + + VLLSNIY+ +W++A
Sbjct: 479 MEANAIVWGALLGACRIHRDTQLAELALKQLIELEPWNSGNYVLLSNIYSANLKWDEAAK 538
Query: 646 IRKEMRDCGMKRLPGFSGV 664
+R M + +++ PG S +
Sbjct: 539 VRLSMNEKRIQKPPGCSWI 557
Score = 163 bits (412), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 123/493 (24%), Positives = 224/493 (45%), Gaps = 100/493 (20%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
L+ C+ + + G +IH+L+ K G + + F++ SL+ LYAKCG
Sbjct: 119 LKACARLLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKCGY---------------- 162
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
L DA +VFD P K VS+T++I G+ +REA+++FR + +
Sbjct: 163 ---------------LEDAHKVFDDIPDKNVVSWTAIISGYIGVGKFREAIDMFRRLLEM 207
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
+ P+ T+ V+S+ LG + +H ++++ + V + T+L++MY C ++ +A
Sbjct: 208 NLAPDSFTIVRVLSACTQLGDLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKA 267
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLS 269
RS+FD M E++IVSW M+ G+A GL + A ID +LQ++R
Sbjct: 268 RSVFDGMPEKDIVSWGAMIQGYALNGLPKEA------------------IDLFLQMQR-- 307
Query: 270 EALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATII 329
+ + P+ +V ++SAC R A G + ++ + F + +I
Sbjct: 308 -----------ENVKPDCYTVVGVLSACARLGALELGEWVSGLVDRNEFLYNPVLGTALI 356
Query: 330 HFYAACGRINLARLQFE-LGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWS 388
YA CG ++ A F+ + KD + WNA+I+G NG ++ + LF ++K
Sbjct: 357 DLYAKCGSMSRAWEVFKGMKEKDRVV-WNAIISGLAMNGYVKISFGLFGQVEK------- 408
Query: 389 AMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG-RWAHEYVLN 447
G+KP+ T + + C +G + EG R+ +
Sbjct: 409 ------------------------LGIKPDGNTFIGLLCGCTHAGLVDEGRRYFNSMYRF 444
Query: 448 NSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGD---AN 504
S+T + ++D+ + G ++ A ++ ++ ++ W A++ +H D A
Sbjct: 445 FSLTPSIEHYGCMVDLLGRAGLLDEAHQLIRNMPMEANAIV-WGALLGACRIHRDTQLAE 503
Query: 505 LTLKIYSDLEKRN 517
L LK +LE N
Sbjct: 504 LALKQLIELEPWN 516
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 87/369 (23%), Positives = 148/369 (40%), Gaps = 93/369 (25%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+V L C+ ++ G+ IH I + G+ N F+ SL+++YAKCG + +A+S+FD
Sbjct: 214 FTIVRVLSACTQLGDLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDG 273
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
D V+ MI GY A N +EA+++F
Sbjct: 274 MPEKDIVSWGAMIQGY-------------------------------ALNGLPKEAIDLF 302
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
M+ V P+ T+ V+S+ LG + + GLV + ++ T L+++Y C
Sbjct: 303 LQMQRENVKPDCYTVVGVLSACARLGALELGEWVSGLVDRNEFLYNPVLGTALIDLYAKC 362
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYL 263
S+ A +F MKE++ V WN +++G A G V+++ LF
Sbjct: 363 GSMSRAWEVFKGMKEKDRVVWNAIISGLAMNGYVKISFGLFG------------------ 404
Query: 264 QVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDF 323
QVE+L GI P+ + L+ C A EG + + + Y F
Sbjct: 405 QVEKL-------------GIKPDGNTFIGLLCGCTHAGLVDEGRRYFNSM-------YRF 444
Query: 324 IQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ-KR 382
T I + ++ R G++++A QL NM +
Sbjct: 445 FSLT-----------------------PSIEHYGCMVDLLGRAGLLDEAHQLIRNMPMEA 481
Query: 383 DVYSWSAMI 391
+ W A++
Sbjct: 482 NAIVWGALL 490
>gi|449491161|ref|XP_004158817.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g15930-like [Cucumis
sativus]
Length = 744
Score = 347 bits (889), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 207/640 (32%), Positives = 319/640 (49%), Gaps = 69/640 (10%)
Query: 25 ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSC 84
L+S L C + + Q QQ+H K GL +N +QN ++ C
Sbjct: 41 PLISLLETCES---MDQLQQVHCQAIKKGLNANPVLQNRVMTF----------------C 81
Query: 85 STLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFR 144
T + AR +FD+ P + +MI G+++ D + + ++
Sbjct: 82 CTHE-------------YGDFQYARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYL 128
Query: 145 DMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCS 204
+M GV P+ T + + R LHG V+K + V + T L+ MY +C
Sbjct: 129 EMLRRGVKPDRYTFPFLFKGFTRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLC- 187
Query: 205 SLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQ 264
G ++ AR +F+ P DV++W +I Y +
Sbjct: 188 ------------------------------GQLDTARGVFDVCPKADVITWNMIISAYNK 217
Query: 265 VERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFI 324
V + E+ ++ M + P V +V ++SAC + G ++HS + + +
Sbjct: 218 VGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVL 277
Query: 325 QATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDV 384
+ +I YA CG ++ A F I SW +++GF G I+ AR F+ M ++D
Sbjct: 278 ENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDY 337
Query: 385 YSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEY 444
SW+AMI GY ++ + ALELF M VKP+E TMVSV A A G L+ G W Y
Sbjct: 338 VSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTY 397
Query: 445 VLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHI--RDRTTSVSPWNAIICGLAMHGD 502
+ N I + + A+IDMY KCG ++ A +F + RD+ T W A+I GLA++G
Sbjct: 398 IDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFT----WTAMIVGLAVNGH 453
Query: 503 ANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYG 562
L ++S++ K +I + IT+IGVLS C H GLVD G +YF M S + +EP++ HYG
Sbjct: 454 GEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYG 513
Query: 563 CMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPS 622
C+VDLL RAG+L++A EVI +MP+KA+ ++WG LLA R++ ++ E K + L+P
Sbjct: 514 CLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQILELEPD 573
Query: 623 HGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
+G VLL NIYA RW D +R+ M D G+K+ PG S
Sbjct: 574 NGAVYVLLCNIYAACKRWNDLRELRQMMMDKGIKKXPGCS 613
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 103/410 (25%), Positives = 195/410 (47%), Gaps = 64/410 (15%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+ LV L CS + G+++HS + +ESN ++N++I++YA CG + A +F S
Sbjct: 241 VTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYADCGEMDSALGIFRS 300
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
+ D ++ ++SG+ ++ AR FDK P K VS+T+MI G+ +++ ++EALE+F
Sbjct: 301 MNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELF 360
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
R+M+ V P+E T+ SV+++ HLG + + + + I + + L++MY C
Sbjct: 361 RNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIKNDLFVRNALIDMYFKC 420
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYL 263
+ +A S+F EM +R+ +W M+ G A G E
Sbjct: 421 GDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGE------------------------- 455
Query: 264 QVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDF 323
+AL M+ ML I P+++ + ++SAC H+ +V
Sbjct: 456 ------KALDMFSNMLKASILPDEITYIGVLSAC-----------THTGLVDK------- 491
Query: 324 IQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ-KR 382
GR R+ + GI+ +IA + L+ R G +++A ++ NM K
Sbjct: 492 ------------GRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAYEVIENMPIKA 539
Query: 383 DVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASS 432
+ W A+++G + +MA + +++ ++P+ + + C I ++
Sbjct: 540 NSIVWGALLAGCRVYRESDMAEMVVKQILE--LEPDNGAVYVLLCNIYAA 587
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 133/299 (44%), Gaps = 80/299 (26%)
Query: 11 NSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAK 70
N Q N++ E +VS L C+ A+ G+ I + I ++ ++++ F++N+LI++Y K
Sbjct: 362 NMQATNVKPD--EFTMVSVLTACAHLGALELGEWIRTYIDRNKIKNDLFVRNALIDMYFK 419
Query: 71 CGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGF 130
CG + +A+S+F S D ++T+MI+G
Sbjct: 420 CGDVDKAESIFREMSQRDK-------------------------------FTWTAMIVGL 448
Query: 131 AQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFV 190
A N +AL++F +M ++P+E+T V+S+ H G ++D
Sbjct: 449 AVNGHGEKALDMFSNMLKASILPDEITYIGVLSACTHTG---------------LVD--- 490
Query: 191 IISTNLLNMYCVCSSLVEARSLFDEMK-----ERNIVSWNVMLNGFAKAGLVELARELFE 245
+ R F M E NI + +++ A+AG ++ A E+ E
Sbjct: 491 -----------------KGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAYEVIE 533
Query: 246 RIPSK-DVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPND----VMIVDLISACGR 299
+P K + + WG ++ G +V R S+ M + + + P++ V++ ++ +AC R
Sbjct: 534 NMPIKANSIVWGALLAG-CRVYRESDMAEMVVKQILE-LEPDNGAVYVLLCNIYAACKR 590
>gi|225449798|ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 849
Score = 347 bits (889), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 201/635 (31%), Positives = 327/635 (51%), Gaps = 95/635 (14%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
L+ C + + +G++IH + +G SN F ++N+YAKC L+ +A MFD
Sbjct: 182 LKVCGDNADLRKGKEIHCQLIVNGFASNVFAMTGVVNMYAKCRLVEEAYKMFD------- 234
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
+ P + V + ++I G+AQN + ALE+ M+
Sbjct: 235 ------------------------RMPERDLVCWNTIISGYAQNGFGKTALELVLRMQEE 270
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
G P+ +T+ S++ + +G + R +HG ++ + FV +ST L++MY C S
Sbjct: 271 GKRPDSITIVSILPAVADVGSLRIGRSIHGYSMRAGFESFVNVSTALVDMYSKCGS---- 326
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLS 269
V AR +F+R+ K VVSW +MIDGY+Q
Sbjct: 327 ---------------------------VGTARLIFDRMTGKTVVSWNSMIDGYVQNGDPG 359
Query: 270 EALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATII 329
A+ +++ M+ + + +V ++ + AC +G +H ++
Sbjct: 360 AAMEIFQKMMDEQVEMTNVTVMGALHACADLGDVEQGRFVHKLLD--------------- 404
Query: 330 HFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSA 389
Q ELG ++ N+LI+ + + ++ A ++F N+Q + + SW+A
Sbjct: 405 --------------QLELG--SDVSVMNSLISMYSKCKRVDIAAEIFENLQHKTLVSWNA 448
Query: 390 MISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNS 449
MI GYAQN + N A++ F M +KP+ TMVSV A+A L + +W H V+
Sbjct: 449 MILGYAQNGRINEAIDYFCKMQLQNIKPDSFTMVSVIPALAELSVLPQAKWIHGLVIRTC 508
Query: 450 ITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKI 509
+ N ++ A++DMYAKCG+++TA ++F + +R V+ WNA+I G HG L++
Sbjct: 509 LDKNVFVATALVDMYAKCGAVHTARKLFDMMDER--HVTTWNAMIDGYGTHGLGKAALEL 566
Query: 510 YSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLG 569
+ ++K IK N +TF+ VLS C H+GLV+ G +YF SMK Y +EP + HYG MVDLLG
Sbjct: 567 FEKMKKEVIKPNEVTFLCVLSACSHSGLVEEGFQYFGSMKKDYGLEPAMDHYGAMVDLLG 626
Query: 570 RAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVL 629
RA +L +A + I+ MP++ + ++G +L A RIH NVE+GE+AA + L P G VL
Sbjct: 627 RANRLNEAWDFIQKMPIEPAISVFGAMLGACRIHKNVELGEKAANRIFDLDPDDGGYHVL 686
Query: 630 LSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
L+NIYA A W+ +R M G+++ PG+S V
Sbjct: 687 LANIYATASMWDKVARVRTTMEKKGIQKTPGWSVV 721
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 99/411 (24%), Positives = 186/411 (45%), Gaps = 43/411 (10%)
Query: 202 VCSSLVEARSLFDEMKERNIVSWNV----MLNGFAKAGLVELARELFERIPSKDVVSWGT 257
+C+S+ E + + + S ++ +++ F K G + A +F+ I K + T
Sbjct: 86 LCTSMKELHQFIPLIIKNGLYSEHLFQTKLVSLFCKFGSLHEAARVFQPIEDKIDELYHT 145
Query: 258 MIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAG 317
M+ GY + L +A++ + M DG+ P L+ CG +G +IH ++ G
Sbjct: 146 MLKGYARNSSLDDAVSFFCRMRYDGVRPVVYNFTYLLKVCGDNADLRKGKEIHCQLIVNG 205
Query: 318 FDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFN 377
F F +++ YA C + A F+ + + WN +I+G+ +NG
Sbjct: 206 FASNVFAMTGVVNMYAKCRLVEEAYKMFDRMPERDLVCWNTIISGYAQNGF--------- 256
Query: 378 NMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKE 437
ALEL M + G +P+ IT+VS+ A+A G+L+
Sbjct: 257 ----------------------GKTALELVLRMQEEGKRPDSITIVSILPAVADVGSLRI 294
Query: 438 GRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTT--SVSPWNAIIC 495
GR H Y + N+S A++DMY+KCGS+ TA +F DR T +V WN++I
Sbjct: 295 GRSIHGYSMRAGFESFVNVSTALVDMYSKCGSVGTARLIF----DRMTGKTVVSWNSMID 350
Query: 496 GLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVE 555
G +GD ++I+ + +++ ++T +G L C G V+ G R+ + +
Sbjct: 351 GYVQNGDPGAAMEIFQKMMDEQVEMTNVTVMGALHACADLGDVEQG-RFVHKLLDQLELG 409
Query: 556 PDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNV 606
D+ ++ + + +++ A E+ ++ K +V W ++ +G +
Sbjct: 410 SDVSVMNSLISMYSKCKRVDIAAEIFENLQHKT-LVSWNAMILGYAQNGRI 459
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 136/285 (47%), Gaps = 62/285 (21%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+ ++ AL C+ V QG+ +H L+ + L S+ + NSLI++Y+KC + A +F++
Sbjct: 378 VTVMGALHACADLGDVEQGRFVHKLLDQLELGSDVSVMNSLISMYSKCKRVDIAAEIFEN 437
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
V+ N MI GY +N R+N EA++ F
Sbjct: 438 LQHKTLVSWNAMILGYAQNGRIN-------------------------------EAIDYF 466
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
M++ + P+ T+ SVI + L + + + +HGLVI+ +D V ++T L++MY C
Sbjct: 467 CKMQLQNIKPDSFTMVSVIPALAELSVLPQAKWIHGLVIRTCLDKNVFVATALVDMYAKC 526
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYL 263
++ AR LFD M ER++ +WN M++G+ GL + A ELFE++ K+V
Sbjct: 527 GAVHTARKLFDMMDERHVTTWNAMIDGYGTHGLGKAALELFEKM-KKEV----------- 574
Query: 264 QVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQ 308
I PN+V + ++SAC + EG Q
Sbjct: 575 -------------------IKPNEVTFLCVLSACSHSGLVEEGFQ 600
>gi|334185551|ref|NP_001189950.1| uncharacterized protein [Arabidopsis thaliana]
gi|75274240|sp|Q9LUJ2.1|PP249_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g22690
gi|9279687|dbj|BAB01244.1| unnamed protein product [Arabidopsis thaliana]
gi|332643145|gb|AEE76666.1| uncharacterized protein [Arabidopsis thaliana]
Length = 842
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 204/638 (31%), Positives = 332/638 (52%), Gaps = 66/638 (10%)
Query: 29 ALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLD 88
L C+ A G QIH LI K G + F+QNSL++ YA+CG
Sbjct: 140 GLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECG---------------- 183
Query: 89 PVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF-RDMR 147
L+ AR+VFD+ + VS+TSMI G+A+ D ++A+++F R +R
Sbjct: 184 ---------------ELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVR 228
Query: 148 ILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLV 207
V PN VT+ VIS+ L + ++ + I+ ++ + L++MY C+++
Sbjct: 229 DEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAID 288
Query: 208 EARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVER 267
A+ LFDE N+ N M + + + GL
Sbjct: 289 VAKRLFDEYGASNLDLCNAMASNYVRQGLTR----------------------------- 319
Query: 268 LSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQAT 327
EAL ++ M+ G+ P+ + ++ IS+C + G H +++ GF+ +D I
Sbjct: 320 --EALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNA 377
Query: 328 IIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSW 387
+I Y C R + A F+ + +WN+++AG++ NG ++ A + F M ++++ SW
Sbjct: 378 LIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSW 437
Query: 388 SAMISGYAQNEQPNMALELFHGM-VDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVL 446
+ +ISG Q A+E+F M GV + +TM+S+ A G L +W + Y+
Sbjct: 438 NTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIE 497
Query: 447 NNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLT 506
N I L+ L ++DM+++CG +A +F + +R VS W A I +AM G+A
Sbjct: 498 KNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNR--DVSAWTAAIGAMAMAGNAERA 555
Query: 507 LKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVD 566
++++ D+ ++ +K + + F+G L+ C H GLV G+ F SM ++ V P+ HYGCMVD
Sbjct: 556 IELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVD 615
Query: 567 LLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPS 626
LLGRAG LE+A ++I MPM+ + VIW +LLAA R+ GNVE+ AA+ + L P S
Sbjct: 616 LLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGS 675
Query: 627 RVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
VLLSN+YA AGRW D +R M++ G+++ PG S +
Sbjct: 676 YVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSI 713
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 128/538 (23%), Positives = 237/538 (44%), Gaps = 98/538 (18%)
Query: 103 DRLNDAREVFDKT-PIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASV 161
+ L+ A+EVF+ + C Y S+I G+A + EA+ +F M G+ P++ T
Sbjct: 81 ESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFG 140
Query: 162 ISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNI 221
+S+ +HGL++K+ + + +L++ Y C L AR +FDEM ERN+
Sbjct: 141 LSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNV 200
Query: 222 VSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCD 281
VSW M+ G+A+ + A +LF +R + +
Sbjct: 201 VSWTSMICGYARRDFAKDAVDLF------------------------------FRMVRDE 230
Query: 282 GIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLA 341
+ PN V +V +ISAC + G ++++ I +G + D + + ++ Y C I++A
Sbjct: 231 EVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVA 290
Query: 342 RLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPN 401
+ F+ ++ NA+ + ++R G+ +
Sbjct: 291 KRLFDEYGASNLDLCNAMASNYVRQGLTRE------------------------------ 320
Query: 402 MALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAII 461
AL +F+ M+D+GV+P+ I+M+S + + + G+ H YVL N DN+ A+I
Sbjct: 321 -ALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALI 379
Query: 462 DMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNI--- 518
DMY KC +TAF +F + ++T V WN+I+ G +G+ + + + + ++NI
Sbjct: 380 DMYMKCHRQDTAFRIFDRMSNKT--VVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSW 437
Query: 519 -----------------------------KLNSITFIGVLSTCCHAGLVDLGERYFKSMK 549
+ +T + + S C H G +DL + + ++
Sbjct: 438 NTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIE 497
Query: 550 SVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVE 607
++ D++ +VD+ R G E A + S+ + DV W + A + GN E
Sbjct: 498 K-NGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNR-DVSAWTAAIGAMAMAGNAE 553
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 124/484 (25%), Positives = 216/484 (44%), Gaps = 65/484 (13%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+ +V + C+ + G+++++ I SG+E N + ++L+++Y KC I AK +FD
Sbjct: 237 VTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDE 296
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
+ CN M S Y+R G REAL VF
Sbjct: 297 YGASNLDLCNAMASNYVRQ--------------------------GLT-----REALGVF 325
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
M GV P+ +++ S ISS L I + HG V++ + + I L++MY C
Sbjct: 326 NLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKC 385
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYL 263
A +FD M + +V+WN ++ G+ + G V+ A E FE +P K++VSW T+I G +
Sbjct: 386 HRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLV 445
Query: 264 QVERLSEALTMYRAMLC-DGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD 322
Q EA+ ++ +M +G+ + V ++ + SACG A I+ I K G
Sbjct: 446 QGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGI---- 501
Query: 323 FIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKR 382
+L LG L+ F R G E A +FN++ R
Sbjct: 502 -------------------QLDVRLG--------TTLVDMFSRCGDPESAMSIFNSLTNR 534
Query: 383 DVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAH 442
DV +W+A I A A+ELF M++ G+KP+ + V A + G +++G+
Sbjct: 535 DVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIF 594
Query: 443 EYVLN-NSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHG 501
+L + ++ D ++D+ + G + A ++ + V WN+++ + G
Sbjct: 595 YSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDV-IWNSLLAACRVQG 653
Query: 502 DANL 505
+ +
Sbjct: 654 NVEM 657
>gi|449436619|ref|XP_004136090.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Cucumis sativus]
Length = 723
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 207/640 (32%), Positives = 319/640 (49%), Gaps = 69/640 (10%)
Query: 25 ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSC 84
L+S L C + + Q QQ+H K GL +N +QN ++ C
Sbjct: 20 PLISLLETCES---MDQLQQVHCQAIKKGLNANPVLQNRVMTF----------------C 60
Query: 85 STLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFR 144
T + AR +FD+ P + +MI G+++ D + + ++
Sbjct: 61 CTHE-------------YGDFQYARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYL 107
Query: 145 DMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCS 204
+M GV P+ T + + R LHG V+K + V + T L+ MY +C
Sbjct: 108 EMLRRGVKPDRYTFPFLFKGFTRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLC- 166
Query: 205 SLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQ 264
G ++ AR +F+ P DV++W +I Y +
Sbjct: 167 ------------------------------GQLDTARGVFDVCPKADVITWNMIISAYNK 196
Query: 265 VERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFI 324
V + E+ ++ M + P V +V ++SAC + G ++HS + + +
Sbjct: 197 VGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVL 256
Query: 325 QATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDV 384
+ +I YA CG ++ A F I SW +++GF G I+ AR F+ M ++D
Sbjct: 257 ENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDY 316
Query: 385 YSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEY 444
SW+AMI GY ++ + ALELF M VKP+E TMVSV A A G L+ G W Y
Sbjct: 317 VSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTY 376
Query: 445 VLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHI--RDRTTSVSPWNAIICGLAMHGD 502
+ N I + + A+IDMY KCG ++ A +F + RD+ T W A+I GLA++G
Sbjct: 377 IDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFT----WTAMIVGLAVNGH 432
Query: 503 ANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYG 562
L ++S++ K +I + IT+IGVLS C H GLVD G +YF M S + +EP++ HYG
Sbjct: 433 GEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYG 492
Query: 563 CMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPS 622
C+VDLL RAG+L++A EVI +MP+KA+ ++WG LLA R++ ++ E K + L+P
Sbjct: 493 CLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQILELEPD 552
Query: 623 HGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
+G VLL NIYA RW D +R+ M D G+K+ PG S
Sbjct: 553 NGAVYVLLCNIYAACKRWNDLRELRQMMMDKGIKKTPGCS 592
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 103/410 (25%), Positives = 195/410 (47%), Gaps = 64/410 (15%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+ LV L CS + G+++HS + +ESN ++N++I++YA CG + A +F S
Sbjct: 220 VTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYADCGEMDSALGIFRS 279
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
+ D ++ ++SG+ ++ AR FDK P K VS+T+MI G+ +++ ++EALE+F
Sbjct: 280 MNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELF 339
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
R+M+ V P+E T+ SV+++ HLG + + + + I + + L++MY C
Sbjct: 340 RNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIKNDLFVRNALIDMYFKC 399
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYL 263
+ +A S+F EM +R+ +W M+ G A G E
Sbjct: 400 GDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGE------------------------- 434
Query: 264 QVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDF 323
+AL M+ ML I P+++ + ++SAC H+ +V
Sbjct: 435 ------KALDMFSNMLKASILPDEITYIGVLSAC-----------THTGLVDK------- 470
Query: 324 IQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ-KR 382
GR R+ + GI+ +IA + L+ R G +++A ++ NM K
Sbjct: 471 ------------GRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAYEVIENMPIKA 518
Query: 383 DVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASS 432
+ W A+++G + +MA + +++ ++P+ + + C I ++
Sbjct: 519 NSIVWGALLAGCRVYRESDMAEMVVKQILE--LEPDNGAVYVLLCNIYAA 566
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 133/299 (44%), Gaps = 80/299 (26%)
Query: 11 NSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAK 70
N Q N++ E +VS L C+ A+ G+ I + I ++ ++++ F++N+LI++Y K
Sbjct: 341 NMQATNVKPD--EFTMVSVLTACAHLGALELGEWIRTYIDRNKIKNDLFVRNALIDMYFK 398
Query: 71 CGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGF 130
CG + +A+S+F S D ++T+MI+G
Sbjct: 399 CGDVDKAESIFREMSQRDK-------------------------------FTWTAMIVGL 427
Query: 131 AQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFV 190
A N +AL++F +M ++P+E+T V+S+ H G ++D
Sbjct: 428 AVNGHGEKALDMFSNMLKASILPDEITYIGVLSACTHTG---------------LVD--- 469
Query: 191 IISTNLLNMYCVCSSLVEARSLFDEMK-----ERNIVSWNVMLNGFAKAGLVELARELFE 245
+ R F M E NI + +++ A+AG ++ A E+ E
Sbjct: 470 -----------------KGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAYEVIE 512
Query: 246 RIPSK-DVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPND----VMIVDLISACGR 299
+P K + + WG ++ G +V R S+ M + + + P++ V++ ++ +AC R
Sbjct: 513 NMPIKANSIVWGALLAG-CRVYRESDMAEMVVKQILE-LEPDNGAVYVLLCNIYAACKR 569
>gi|359490408|ref|XP_002267761.2| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Vitis vinifera]
Length = 650
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 199/578 (34%), Positives = 315/578 (54%), Gaps = 34/578 (5%)
Query: 88 DPVACNIMISGY-IRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDM 146
DP + +I Y + + L+ A VF++ V + MI G +Q+D EA+ ++ M
Sbjct: 48 DPFLMSDVIRSYSLSSTNLHKAHLVFNQIECPTLVVWNHMIRGLSQSDHPVEAIHMYTRM 107
Query: 147 RILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSL 206
G+ N +TL + + + I R +H +KL + ++ +S L++MY +C L
Sbjct: 108 HHQGITGNNLTLIFLFKACARVSDIVSGRKIHVHALKLGFESYLFVSNALIHMYAMCGQL 167
Query: 207 VEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVE 266
A+ +FD M +R++VSWN T+I GY Q
Sbjct: 168 GFAQKMFDGMLDRDLVSWN-------------------------------TLICGYSQYN 196
Query: 267 RLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQA 326
+ E L ++ AM I + V +V +I AC + + I + + ++
Sbjct: 197 KYKEVLRLFDAMTAANIKADAVTMVKIILACSHLGDWEFADSMVKYIKENNLEIDVYLGN 256
Query: 327 TIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYS 386
T+I Y LA+ F+ + +I SWNAL+ G + G + AR+LF+NM KRDV S
Sbjct: 257 TLIDMYGRRSLAELAQGVFDRMRERNIVSWNALVMGHAKVGNLTAARKLFDNMPKRDVIS 316
Query: 387 WSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVL 446
W++MI+GY+Q Q + A++LF M+ A VKP+++T+ SV A A G L G H Y+
Sbjct: 317 WTSMITGYSQASQFSDAVKLFQEMMAAKVKPDKVTVASVLSACAHLGKLDVGWAVHHYIR 376
Query: 447 NNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLT 506
+ + + + ++IDMY KCG + A EVF+ ++D+ SVS W ++I GLA++G AN
Sbjct: 377 RHGVQADIYVGNSLIDMYCKCGMVEKALEVFHRMKDK-DSVS-WTSVISGLAVNGFANSA 434
Query: 507 LKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVD 566
L ++S + + ++ TF+G+L C HAGLV+ G YF+SM+SV+ + P +KHYGC+VD
Sbjct: 435 LDLFSQMLREGVQPTHGTFVGILLACAHAGLVNKGLEYFESMESVHGLVPAMKHYGCVVD 494
Query: 567 LLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPS 626
LL R+G ++ A E I+ MP+ DVV+W LL+A ++HGNV + E A K L L P +
Sbjct: 495 LLSRSGNIDKAYEFIKKMPIVPDVVVWRILLSACKLHGNVVLAEIATKRLLELDPCDSGN 554
Query: 627 RVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
VLLSN YA RW+DA +R+ M D +++ G S +
Sbjct: 555 YVLLSNTYAGVDRWDDAMKMRELMEDSDVQKPSGSSSI 592
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 137/486 (28%), Positives = 226/486 (46%), Gaps = 70/486 (14%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
L L+ + C+ + G++IH K G ES F+ N+LI++YA CG + A+ MFD
Sbjct: 117 LTLIFLFKACARVSDIVSGRKIHVHALKLGFESYLFVSNALIHMYAMCGQLGFAQKMFDG 176
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
D V+ N +I GY +Q + ++E L +F
Sbjct: 177 MLDRDLVSWNTLICGY-------------------------------SQYNKYKEVLRLF 205
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIK---LMIDGFVIISTNLLNMY 200
M + + VT+ +I + HLG WE IK L ID V + L++MY
Sbjct: 206 DAMTAANIKADAVTMVKIILACSHLGD-WEFADSMVKYIKENNLEID--VYLGNTLIDMY 262
Query: 201 CVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMID 260
S A+ +FD M+ERNIVSWN ++ G AK G + AR+LF+ +P +DV+SW +MI
Sbjct: 263 GRRSLAELAQGVFDRMRERNIVSWNALVMGHAKVGNLTAARKLFDNMPKRDVISWTSMIT 322
Query: 261 GYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDC 320
GY Q + S+A+ +++ M+ + P+ V + ++SAC G +H I + G
Sbjct: 323 GYSQASQFSDAVKLFQEMMAAKVKPDKVTVASVLSACAHLGKLDVGWAVHHYIRRHGVQA 382
Query: 321 YDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ 380
++ ++I Y CG M+E A ++F+ M+
Sbjct: 383 DIYVGNSLIDMYCKCG-------------------------------MVEKALEVFHRMK 411
Query: 381 KRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRW 440
+D SW+++ISG A N N AL+LF M+ GV+P T V + A A +G + +G
Sbjct: 412 DKDSVSWTSVISGLAVNGFANSALDLFSQMLREGVQPTHGTFVGILLACAHAGLVNKGLE 471
Query: 441 AHEYVLN-NSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAM 499
E + + + + ++D+ ++ G+I+ A+E F V W ++ +
Sbjct: 472 YFESMESVHGLVPAMKHYGCVVDLLSRSGNIDKAYE-FIKKMPIVPDVVVWRILLSACKL 530
Query: 500 HGDANL 505
HG+ L
Sbjct: 531 HGNVVL 536
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 111/267 (41%), Gaps = 48/267 (17%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
++ + S L C+ + G +H I + G++++ ++ NSLI++Y KCG++ +A +F
Sbjct: 349 KVTVASVLSACAHLGKLDVGWAVHHYIRRHGVQADIYVGNSLIDMYCKCGMVEKALEVF- 407
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
R+ D V S+TS+I G A N AL++
Sbjct: 408 --------------------HRMKDKDSV----------SWTSVISGLAVNGFANSALDL 437
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWE-------CRMLHGLVIKLMIDGFVIISTN 195
F M GV P T ++ + H G + + +HGLV + G V+
Sbjct: 438 FSQMLREGVQPTHGTFVGILLACAHAGLVNKGLEYFESMESVHGLVPAMKHYGCVV---- 493
Query: 196 LLNMYCVCSSLVEARSLFDEMK-ERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVS 254
++ ++ +A +M ++V W ++L+ G V LA +R+ D
Sbjct: 494 --DLLSRSGNIDKAYEFIKKMPIVPDVVVWRILLSACKLHGNVVLAEIATKRLLELDPCD 551
Query: 255 WGTMI---DGYLQVERLSEALTMYRAM 278
G + + Y V+R +A+ M M
Sbjct: 552 SGNYVLLSNTYAGVDRWDDAMKMRELM 578
>gi|225435834|ref|XP_002283791.1| PREDICTED: pentatricopeptide repeat-containing protein At5g56310
[Vitis vinifera]
Length = 576
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 179/474 (37%), Positives = 284/474 (59%), Gaps = 6/474 (1%)
Query: 193 STNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKA----GLVELARELFERIP 248
S +LL++ CS+L M R + N++L+ F +A G + +F
Sbjct: 41 SYHLLSLLKQCSNLKHLHQTHCFMLSRGLDQDNILLSRFIEACSSLGFSHYSHSIFTHKT 100
Query: 249 SKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQ 308
D+ + T+I E +EA+ +Y +L + + + ++ A R +A G Q
Sbjct: 101 RPDIYLYNTIIKALSNPELATEAILLYNRILASDLRFDTYSLPFVLKAVVRLLAIHVGRQ 160
Query: 309 IHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGM 368
IH + G + +I Y++CG ++ AR F+ +A WNA++AG+ + G
Sbjct: 161 IHCQAIGTGLVSDIHVVTALIQMYSSCGCVSEARQLFDGVCFRDVAFWNAMVAGYAKVGD 220
Query: 369 IEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCA 428
+++AR LF M +R+V SW+A+I+GYAQ ++PN A+ +F M V+P+EI M++ A
Sbjct: 221 VDNARHLFERMPERNVISWTAVIAGYAQMDRPNEAITMFRRMQLEEVEPDEIAMLAALSA 280
Query: 429 IASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVS 488
A G L+ G W H Y+ + ++ L+ A+IDMYAKCG I A EVF ++ + SV
Sbjct: 281 CAHLGALELGEWIHNYIDKHGLSKIVPLNNALIDMYAKCGKIEKALEVFKNMEHK--SVI 338
Query: 489 PWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSM 548
W ++I GLA+HG L+++S +E+ IK N ITF+ +LS CCH GLV++G YFK M
Sbjct: 339 TWTSMIDGLALHGLGREALEMFSCMERNRIKPNEITFVAILSACCHVGLVEMGRWYFKCM 398
Query: 549 KSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEV 608
+ Y ++P ++HYGCM+DLLGRAG L++A+E++R MP +A+ IWG+LLAA+RIHG+ E+
Sbjct: 399 GTKYGIKPKIQHYGCMIDLLGRAGFLQEAQELVRGMPFEANAPIWGSLLAAARIHGDAEL 458
Query: 609 GERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
G++A + L ++P + + LLSNIYA +W +A +RK MRD G+K++PG S
Sbjct: 459 GKQALQHLIKVEPHNSGNYTLLSNIYATQSKWNEAGMVRKVMRDTGVKKMPGGS 512
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 110/384 (28%), Positives = 184/384 (47%), Gaps = 33/384 (8%)
Query: 123 YTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVI 182
Y ++I + + EA+ ++ + + + +L V+ + V L I R +H I
Sbjct: 107 YNTIIKALSNPELATEAILLYNRILASDLRFDTYSLPFVLKAVVRLLAIHVGRQIHCQAI 166
Query: 183 KLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARE 242
+ + + T L+ MY C + EAR LFD + R++ WN M+ G+AK G V+ AR
Sbjct: 167 GTGLVSDIHVVTALIQMYSSCGCVSEARQLFDGVCFRDVAFWNAMVAGYAKVGDVDNARH 226
Query: 243 LFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMA 302
LFER+P ++V+SW +I GY Q++R +EA+TM+R M + + P+++ ++ +SAC A
Sbjct: 227 LFERMPERNVISWTAVIAGYAQMDRPNEAITMFRRMQLEEVEPDEIAMLAALSACAHLGA 286
Query: 303 FGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAG 362
G IH+ I K G + +I YA CG+
Sbjct: 287 LELGEWIHNYIDKHGLSKIVPLNNALIDMYAKCGK------------------------- 321
Query: 363 FIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITM 422
IE A ++F NM+ + V +W++MI G A + ALE+F M +KPNEIT
Sbjct: 322 ------IEKALEVFKNMEHKSVITWTSMIDGLALHGLGREALEMFSCMERNRIKPNEITF 375
Query: 423 VSVFCAIASSGTLKEGRWAHEYV-LNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIR 481
V++ A G ++ GRW + + I +ID+ + G + A E+ +
Sbjct: 376 VAILSACCHVGLVEMGRWYFKCMGTKYGIKPKIQHYGCMIDLLGRAGFLQEAQELVRGM- 434
Query: 482 DRTTSVSPWNAIICGLAMHGDANL 505
+ W +++ +HGDA L
Sbjct: 435 PFEANAPIWGSLLAAARIHGDAEL 458
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 93/365 (25%), Positives = 172/365 (47%), Gaps = 63/365 (17%)
Query: 15 ANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLI 74
++L+ Y L V L+ +A+ G+QIH +GL S+ + +LI +Y+ CG +
Sbjct: 133 SDLRFDTYSLPFV--LKAVVRLLAIHVGRQIHCQAIGTGLVSDIHVVTALIQMYSSCGCV 190
Query: 75 SQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQND 134
S+A+ +FD D N M++GY + +++AR +F++ P + +S+T++I G+AQ D
Sbjct: 191 SEARQLFDGVCFRDVAFWNAMVAGYAKVGDVDNARHLFERMPERNVISWTAVIAGYAQMD 250
Query: 135 CWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIIST 194
EA+ +FR M++ V P+E+ + + +S+ HLG + +H + K + V ++
Sbjct: 251 RPNEAITMFRRMQLEEVEPDEIAMLAALSACAHLGALELGEWIHNYIDKHGLSKIVPLNN 310
Query: 195 NLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVS 254
L++MY C + +A +F M+ +++++W M++G A GL
Sbjct: 311 ALIDMYAKCGKIEKALEVFKNMEHKSVITWTSMIDGLALHGLGR---------------- 354
Query: 255 WGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIV 314
EAL M+ M + I PN++ V ++SAC H +V
Sbjct: 355 ---------------EALEMFSCMERNRIKPNEITFVAILSAC-----------CHVGLV 388
Query: 315 KAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQ 374
+ G +Y C + + GIK I + +I R G +++A++
Sbjct: 389 EMG------------RWYFKC-------MGTKYGIKPKIQHYGCMIDLLGRAGFLQEAQE 429
Query: 375 LFNNM 379
L M
Sbjct: 430 LVRGM 434
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 104/233 (44%), Gaps = 45/233 (19%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E+A+++AL C+ A+ G+ IH+ I K GL + N+LI++YAKCG
Sbjct: 271 EIAMLAALSACAHLGALELGEWIHNYIDKHGLSKIVPLNNALIDMYAKCG---------- 320
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
++ A EVF K +++TSMI G A + REALE+
Sbjct: 321 ---------------------KIEKALEVFKNMEHKSVITWTSMIDGLALHGLGREALEM 359
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLG----GIWECRML---HGLVIKLMIDGFVIISTN 195
F M + PNE+T +++S+ H+G G W + + +G+ K+ G +I
Sbjct: 360 FSCMERNRIKPNEITFVAILSACCHVGLVEMGRWYFKCMGTKYGIKPKIQHYGCMI---- 415
Query: 196 LLNMYCVCSSLVEARSLFDEMK-ERNIVSWNVMLNGFAKAGLVELARELFERI 247
++ L EA+ L M E N W +L G EL ++ + +
Sbjct: 416 --DLLGRAGFLQEAQELVRGMPFEANAPIWGSLLAAARIHGDAELGKQALQHL 466
>gi|147774372|emb|CAN72397.1| hypothetical protein VITISV_041201 [Vitis vinifera]
Length = 576
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 179/474 (37%), Positives = 284/474 (59%), Gaps = 6/474 (1%)
Query: 193 STNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKA----GLVELARELFERIP 248
S +LL++ CS+L M R + N++L+ F +A G + +F
Sbjct: 41 SYHLLSLLKQCSNLKHLHQTHCFMLSRGLDQDNILLSRFIEACSSLGFSHYSHSIFTHKT 100
Query: 249 SKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQ 308
D+ + T+I E +EA+ +Y +L + + + ++ A R +A G Q
Sbjct: 101 RPDIYLYNTIIKALSNPELATEAILLYNRILASDLRFDTYSLPFVLKAVVRLLAIHVGRQ 160
Query: 309 IHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGM 368
IH + G + +I Y++CG ++ AR F+ +A WNA++AG+ + G
Sbjct: 161 IHCQAIGTGLVSDIHVVTALIQMYSSCGCVSEARQLFDGVCFRDVAFWNAMVAGYAKVGD 220
Query: 369 IEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCA 428
+++AR LF M +R+V SW+A+I+GYAQ ++PN A+ +F M V+P+EI M++ A
Sbjct: 221 VDNARHLFERMPERNVISWTAVIAGYAQMDRPNEAITMFRRMQLEEVEPDEIAMLAALSA 280
Query: 429 IASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVS 488
A G L+ G W H Y+ + ++ L+ A+IDMYAKCG I A EVF ++ + SV
Sbjct: 281 CAHLGALELGEWIHNYIDKHGLSKIVPLNNALIDMYAKCGKIEKALEVFKNMEHK--SVI 338
Query: 489 PWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSM 548
W ++I GLA+HG L+++S +E+ IK N ITF+ +LS CCH GLV++G YFK M
Sbjct: 339 TWTSMIDGLALHGLGREALEMFSCMERNRIKPNEITFVAILSACCHVGLVEMGRWYFKCM 398
Query: 549 KSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEV 608
+ Y ++P ++HYGCM+DLLGRAG L++A+E++R MP +A+ IWG+LLAA+RIHG+ E+
Sbjct: 399 GTKYGIKPKIQHYGCMIDLLGRAGFLQEAQELVRGMPFEANAPIWGSLLAAARIHGDAEL 458
Query: 609 GERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
G++A + L ++P + + LLSNIYA +W +A +RK MRD G+K++PG S
Sbjct: 459 GKQALQHLIKVEPHNSGNYTLLSNIYATQSKWNEAGMVRKVMRDTGVKKMPGGS 512
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 110/384 (28%), Positives = 184/384 (47%), Gaps = 33/384 (8%)
Query: 123 YTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVI 182
Y ++I + + EA+ ++ + + + +L V+ + V L I R +H I
Sbjct: 107 YNTIIKALSNPELATEAILLYNRILASDLRFDTYSLPFVLKAVVRLLAIHVGRQIHCQAI 166
Query: 183 KLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARE 242
+ + + T L+ MY C + EAR LFD + R++ WN M+ G+AK G V+ AR
Sbjct: 167 GTGLVSDIHVVTALIQMYSSCGCVSEARQLFDGVCFRDVAFWNAMVAGYAKVGDVDNARH 226
Query: 243 LFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMA 302
LFER+P ++V+SW +I GY Q++R +EA+TM+R M + + P+++ ++ +SAC A
Sbjct: 227 LFERMPERNVISWTAVIAGYAQMDRPNEAITMFRRMQLEEVEPDEIAMLAALSACAHLGA 286
Query: 303 FGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAG 362
G IH+ I K G + +I YA CG+
Sbjct: 287 LELGEWIHNYIDKHGLSKIVPLNNALIDMYAKCGK------------------------- 321
Query: 363 FIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITM 422
IE A ++F NM+ + V +W++MI G A + ALE+F M +KPNEIT
Sbjct: 322 ------IEKALEVFKNMEHKSVITWTSMIDGLALHGLGREALEMFSCMERNRIKPNEITF 375
Query: 423 VSVFCAIASSGTLKEGRWAHEYV-LNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIR 481
V++ A G ++ GRW + + I +ID+ + G + A E+ +
Sbjct: 376 VAILSACCHVGLVEMGRWYFKCMGTKYGIKPKIQHYGCMIDLLGRAGFLQEAQELVRGM- 434
Query: 482 DRTTSVSPWNAIICGLAMHGDANL 505
+ W +++ +HGDA L
Sbjct: 435 PFEANAPIWGSLLAAARIHGDAEL 458
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 93/365 (25%), Positives = 172/365 (47%), Gaps = 63/365 (17%)
Query: 15 ANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLI 74
++L+ Y L V L+ +A+ G+QIH +GL S+ + +LI +Y+ CG +
Sbjct: 133 SDLRFDTYSLPFV--LKAVVRLLAIHVGRQIHCQAIGTGLVSDIHVVTALIQMYSSCGCV 190
Query: 75 SQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQND 134
S+A+ +FD D N M++GY + +++AR +F++ P + +S+T++I G+AQ D
Sbjct: 191 SEARQLFDGVCFRDVAFWNAMVAGYAKVGDVDNARHLFERMPERNVISWTAVIAGYAQMD 250
Query: 135 CWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIIST 194
EA+ +FR M++ V P+E+ + + +S+ HLG + +H + K + V ++
Sbjct: 251 RPNEAITMFRRMQLEEVEPDEIAMLAALSACAHLGALELGEWIHNYIDKHGLSKIVPLNN 310
Query: 195 NLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVS 254
L++MY C + +A +F M+ +++++W M++G A GL
Sbjct: 311 ALIDMYAKCGKIEKALEVFKNMEHKSVITWTSMIDGLALHGLGR---------------- 354
Query: 255 WGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIV 314
EAL M+ M + I PN++ V ++SAC H +V
Sbjct: 355 ---------------EALEMFSCMERNRIKPNEITFVAILSAC-----------CHVGLV 388
Query: 315 KAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQ 374
+ G +Y C + + GIK I + +I R G +++A++
Sbjct: 389 EMG------------RWYFKC-------MGTKYGIKPKIQHYGCMIDLLGRAGFLQEAQE 429
Query: 375 LFNNM 379
L M
Sbjct: 430 LVRGM 434
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 104/233 (44%), Gaps = 45/233 (19%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E+A+++AL C+ A+ G+ IH+ I K GL + N+LI++YAKCG
Sbjct: 271 EIAMLAALSACAHLGALELGEWIHNYIDKHGLSKIVPLNNALIDMYAKCG---------- 320
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
++ A EVF K +++TSMI G A + REALE+
Sbjct: 321 ---------------------KIEKALEVFKNMEHKSVITWTSMIDGLALHGLGREALEM 359
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLG----GIWECRML---HGLVIKLMIDGFVIISTN 195
F M + PNE+T +++S+ H+G G W + + +G+ K+ G +I
Sbjct: 360 FSCMERNRIKPNEITFVAILSACCHVGLVEMGRWYFKCMGTKYGIKPKIQHYGCMI---- 415
Query: 196 LLNMYCVCSSLVEARSLFDEMK-ERNIVSWNVMLNGFAKAGLVELARELFERI 247
++ L EA+ L M E N W +L G EL ++ + +
Sbjct: 416 --DLLGRAGFLQEAQELVRGMPFEANAPIWGSLLAAARIHGDAELGKQALQHL 466
>gi|334185549|ref|NP_188908.2| uncharacterized protein [Arabidopsis thaliana]
gi|332643144|gb|AEE76665.1| uncharacterized protein [Arabidopsis thaliana]
Length = 938
Score = 346 bits (887), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 204/638 (31%), Positives = 332/638 (52%), Gaps = 66/638 (10%)
Query: 29 ALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLD 88
L C+ A G QIH LI K G + F+QNSL++ YA+CG
Sbjct: 140 GLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECG---------------- 183
Query: 89 PVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF-RDMR 147
L+ AR+VFD+ + VS+TSMI G+A+ D ++A+++F R +R
Sbjct: 184 ---------------ELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVR 228
Query: 148 ILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLV 207
V PN VT+ VIS+ L + ++ + I+ ++ + L++MY C+++
Sbjct: 229 DEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAID 288
Query: 208 EARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVER 267
A+ LFDE N+ N M + + + GL
Sbjct: 289 VAKRLFDEYGASNLDLCNAMASNYVRQGLTR----------------------------- 319
Query: 268 LSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQAT 327
EAL ++ M+ G+ P+ + ++ IS+C + G H +++ GF+ +D I
Sbjct: 320 --EALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNA 377
Query: 328 IIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSW 387
+I Y C R + A F+ + +WN+++AG++ NG ++ A + F M ++++ SW
Sbjct: 378 LIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSW 437
Query: 388 SAMISGYAQNEQPNMALELFHGM-VDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVL 446
+ +ISG Q A+E+F M GV + +TM+S+ A G L +W + Y+
Sbjct: 438 NTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIE 497
Query: 447 NNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLT 506
N I L+ L ++DM+++CG +A +F + +R VS W A I +AM G+A
Sbjct: 498 KNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNR--DVSAWTAAIGAMAMAGNAERA 555
Query: 507 LKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVD 566
++++ D+ ++ +K + + F+G L+ C H GLV G+ F SM ++ V P+ HYGCMVD
Sbjct: 556 IELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVD 615
Query: 567 LLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPS 626
LLGRAG LE+A ++I MPM+ + VIW +LLAA R+ GNVE+ AA+ + L P S
Sbjct: 616 LLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGS 675
Query: 627 RVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
VLLSN+YA AGRW D +R M++ G+++ PG S +
Sbjct: 676 YVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSI 713
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 128/538 (23%), Positives = 237/538 (44%), Gaps = 98/538 (18%)
Query: 103 DRLNDAREVFDKTP-IKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASV 161
+ L+ A+EVF+ + C Y S+I G+A + EA+ +F M G+ P++ T
Sbjct: 81 ESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFG 140
Query: 162 ISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNI 221
+S+ +HGL++K+ + + +L++ Y C L AR +FDEM ERN+
Sbjct: 141 LSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNV 200
Query: 222 VSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCD 281
VSW M+ G+A+ + A +LF +R + +
Sbjct: 201 VSWTSMICGYARRDFAKDAVDLF------------------------------FRMVRDE 230
Query: 282 GIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLA 341
+ PN V +V +ISAC + G ++++ I +G + D + + ++ Y C I++A
Sbjct: 231 EVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVA 290
Query: 342 RLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPN 401
+ F+ ++ NA+ + ++R G+ +
Sbjct: 291 KRLFDEYGASNLDLCNAMASNYVRQGLTRE------------------------------ 320
Query: 402 MALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAII 461
AL +F+ M+D+GV+P+ I+M+S + + + G+ H YVL N DN+ A+I
Sbjct: 321 -ALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALI 379
Query: 462 DMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNI--- 518
DMY KC +TAF +F + ++T V WN+I+ G +G+ + + + + ++NI
Sbjct: 380 DMYMKCHRQDTAFRIFDRMSNKT--VVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSW 437
Query: 519 -----------------------------KLNSITFIGVLSTCCHAGLVDLGERYFKSMK 549
+ +T + + S C H G +DL + + ++
Sbjct: 438 NTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIE 497
Query: 550 SVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVE 607
++ D++ +VD+ R G E A + S+ + DV W + A + GN E
Sbjct: 498 K-NGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNR-DVSAWTAAIGAMAMAGNAE 553
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 124/484 (25%), Positives = 216/484 (44%), Gaps = 65/484 (13%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+ +V + C+ + G+++++ I SG+E N + ++L+++Y KC I AK +FD
Sbjct: 237 VTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDE 296
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
+ CN M S Y+R G REAL VF
Sbjct: 297 YGASNLDLCNAMASNYVRQ--------------------------GLT-----REALGVF 325
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
M GV P+ +++ S ISS L I + HG V++ + + I L++MY C
Sbjct: 326 NLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKC 385
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYL 263
A +FD M + +V+WN ++ G+ + G V+ A E FE +P K++VSW T+I G +
Sbjct: 386 HRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLV 445
Query: 264 QVERLSEALTMYRAMLC-DGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD 322
Q EA+ ++ +M +G+ + V ++ + SACG A I+ I K G
Sbjct: 446 QGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGI---- 501
Query: 323 FIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKR 382
+L LG L+ F R G E A +FN++ R
Sbjct: 502 -------------------QLDVRLG--------TTLVDMFSRCGDPESAMSIFNSLTNR 534
Query: 383 DVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAH 442
DV +W+A I A A+ELF M++ G+KP+ + V A + G +++G+
Sbjct: 535 DVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIF 594
Query: 443 EYVLN-NSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHG 501
+L + ++ D ++D+ + G + A ++ + V WN+++ + G
Sbjct: 595 YSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDV-IWNSLLAACRVQG 653
Query: 502 DANL 505
+ +
Sbjct: 654 NVEM 657
>gi|326497745|dbj|BAK05962.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 742
Score = 346 bits (887), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 199/630 (31%), Positives = 332/630 (52%), Gaps = 30/630 (4%)
Query: 38 AVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMIS 97
+V Q ++H+L+ SG + L+N C S DP+
Sbjct: 11 SVRQATELHALVTTSGRLLHPPSAAHLLNSLTSC------------ISPSDPL------- 51
Query: 98 GYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVT 157
L A +FD+ P + T++ F + + ++R M + V P+ T
Sbjct: 52 ------HLRYALSLFDRMPCSTFLFDTALRACFRASSGPDRPIILYRRMHGVDVPPDAFT 105
Query: 158 LASVISSSVHLGG-IWECRMLHGLVIKLMIDGFV-IISTNLLNMYCVCSSLVEARSLFDE 215
+ G + RMLH + ++ V +I++ +++MY +AR FDE
Sbjct: 106 FHFLFKCCARGGAHVLLGRMLHAACFRTLLPSAVPLIASPIIHMYAELGLPGDARRAFDE 165
Query: 216 MKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMY 275
+++V+W +++G AK GL++ AR L R P ++VV+W +I GY + R +EA+ +
Sbjct: 166 ASVKDVVAWTTVISGLAKMGLLDDARRLLARAPVRNVVTWTGLISGYSRAGRAAEAVDCF 225
Query: 276 RAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAAC 335
+ML DGIAP++V ++ ++SACG+ G +H ++ D + +I YA C
Sbjct: 226 NSMLSDGIAPDEVTVIGMLSACGQLKDLNFGCSLHMLVGDKRMLMSDKLVVALIDMYAKC 285
Query: 336 GRINLARLQFE-LGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGY 394
G AR F+ LG WNA+I G+ + G ++ AR LF+ M+ DV +++++I+GY
Sbjct: 286 GDTGRAREVFDALGRGRGPQPWNAMIDGYCKVGHVDIARSLFDQMEDHDVITFNSLITGY 345
Query: 395 AQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLND 454
+ AL LF M G+ + TMV + A AS G L +GR H + + +
Sbjct: 346 IHGGRLREALLLFTKMRRHGLGADNFTMVGLLTASASLGALPQGRALHACIEQRLVERDV 405
Query: 455 NLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLE 514
L A++DMY KCG + A F + R V W+A+I GLA +G L+ + ++
Sbjct: 406 YLGTALLDMYMKCGRVEEAMVAFKQMSVR--DVHTWSAMIGGLAFNGMGKAALEHFFWMK 463
Query: 515 KRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQL 574
NS+T+I VL+ C H+ L+D G YF M+ ++N+ P ++HYGCM+DLLGR+G L
Sbjct: 464 CDGFHANSVTYIAVLTACSHSCLLDEGRLYFDEMRLLHNIRPQIEHYGCMIDLLGRSGLL 523
Query: 575 EDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIY 634
++A +++++MPM+ + VIW ++L+A R+H NV++ + AA L L+P+ V + NIY
Sbjct: 524 DEAMDLVQTMPMQPNAVIWASILSACRVHKNVDLAQNAAHHLLKLEPAEDAVYVQMYNIY 583
Query: 635 ADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
D+ +WEDA IR+ M G+K+ G+S +
Sbjct: 584 IDSRQWEDASKIRRLMEKRGVKKTAGYSSI 613
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 94/412 (22%), Positives = 179/412 (43%), Gaps = 66/412 (16%)
Query: 10 FNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYA 69
FNS ++ D E+ ++ L C ++ G +H L+ + + + +LI++YA
Sbjct: 225 FNSMLSDGIAPD-EVTVIGMLSACGQLKDLNFGCSLHMLVGDKRMLMSDKLVVALIDMYA 283
Query: 70 KCGLISQAKSMFDSCST-LDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIM 128
KCG +A+ +FD+ P N MI GY + ++ AR +FD+ +++ S+I
Sbjct: 284 KCGDTGRAREVFDALGRGRGPQPWNAMIDGYCKVGHVDIARSLFDQMEDHDVITFNSLIT 343
Query: 129 GFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDG 188
G+ REAL +F MR G+ + T+ ++++S LG + + R LH + + +++
Sbjct: 344 GYIHGGRLREALLLFTKMRRHGLGADNFTMVGLLTASASLGALPQGRALHACIEQRLVER 403
Query: 189 FVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIP 248
V + T LL+MY C + EA F +M R++ +W+ M+ G A G+ + A E F
Sbjct: 404 DVYLGTALLDMYMKCGRVEEAMVAFKQMSVRDVHTWSAMIGGLAFNGMGKAALEHF---- 459
Query: 249 SKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQ 308
W M CDG N V + +++AC + E
Sbjct: 460 -----FW----------------------MKCDGFHANSVTYIAVLTACSHSCLLDE--- 489
Query: 309 IHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGM 368
GR+ ++ I+ I + +I R+G+
Sbjct: 490 ---------------------------GRLYFDEMRLLHNIRPQIEHYGCMIDLLGRSGL 522
Query: 369 IEDARQLFNNMQ-KRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNE 419
+++A L M + + W++++S ++ ++A H ++ ++P E
Sbjct: 523 LDEAMDLVQTMPMQPNAVIWASILSACRVHKNVDLAQNAAHHLLK--LEPAE 572
>gi|449458231|ref|XP_004146851.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g17630-like [Cucumis sativus]
gi|449522932|ref|XP_004168479.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g17630-like [Cucumis sativus]
Length = 705
Score = 345 bits (886), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 210/678 (30%), Positives = 348/678 (51%), Gaps = 57/678 (8%)
Query: 2 PLD-HFHSVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFI 60
PL +FHS F+S + D+ L LR C+ + +Q+HS +G + F+
Sbjct: 19 PLSINFHSQFSSITYDEDLPDFFDHL---LRQCNG---IQHSKQVHSATVVTGAYCSAFV 72
Query: 61 QNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCC 120
L+++Y++ GL+S DAR+VF P +C
Sbjct: 73 SARLVSIYSRYGLVS-------------------------------DARKVFGSAPFECY 101
Query: 121 VSY---TSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRML 177
++ S+I + EAL+++ MR GV+ + T ++ +S +LG C+ L
Sbjct: 102 SNFLLWNSIIRANVYHGYCIEALQLYGKMRNYGVLGDGFTFPLLLRASSNLGAFNMCKNL 161
Query: 178 HGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLV 237
H V++ + + L+ MY + +AR +FD+M+ +++VSWN M++G+A V
Sbjct: 162 HCHVVQFGFQNHLHVGNELIGMYAKLERMDDARKVFDKMRIKSVVSWNTMVSGYAYNYDV 221
Query: 238 ELARELFERIPSKDV----VSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDL 293
A +F ++ + V V+W +++ + + L E + ++ M G+ P M+ +
Sbjct: 222 NGASRMFHQMELEGVEPNPVTWTSLLSSHARCGHLEETMVLFCKMRMKGVGPTAEMLAVV 281
Query: 294 ISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLA-RLQFELGIKDH 352
+S C G IH +VK GF+ Y F + +I Y G + A +L E+ +K+
Sbjct: 282 LSVCADLATLNSGQMIHGYMVKGGFNDYLFAKNALITLYGKGGGVGDAEKLFHEMKVKN- 340
Query: 353 IASWNALIAGFIRNGMIEDARQLFNNMQKRDVY--------SWSAMISGYAQNEQPNMAL 404
+ SWNALI+ F +G+ + A +L + ++K + Y +WSA+I G+A +L
Sbjct: 341 LVSWNALISSFAESGVYDKALELLSQLEKMEAYPEMKPNVITWSAIICGFASKGLGEESL 400
Query: 405 ELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMY 464
E+F M A VK N +T+ SV A L GR H +V+ + N + +I+MY
Sbjct: 401 EVFRKMQLANVKANSVTIASVLSICAMLAALNLGREMHGHVIRARMDDNVLVGNGLINMY 460
Query: 465 AKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSIT 524
KCGS F VF + +R S+S WN++I G HG L ++ + K + + +T
Sbjct: 461 TKCGSFKPGFMVFEKLENRD-SIS-WNSMIAGYGTHGLGKDALATFNHMIKSGYRPDGVT 518
Query: 525 FIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSM 584
FI LS C HAGLV G F M+ + +EP+++HY CMVDLLGRAG +E+A +I+ M
Sbjct: 519 FIAALSACSHAGLVAEGHWLFSQMRQNFKIEPEIEHYACMVDLLGRAGLVEEASNIIKGM 578
Query: 585 PMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAF 644
PM+ + IW +LL + R+H + ++ E AA ++ L S +LLSNI+A + RWED+
Sbjct: 579 PMEPNAYIWSSLLNSCRMHKDTDLAEEAAAKISNLNSKITGSHMLLSNIFAASCRWEDSA 638
Query: 645 SIRKEMRDCGMKRLPGFS 662
+R R G+K++PG+S
Sbjct: 639 RVRISARAKGLKKVPGWS 656
>gi|293336578|ref|NP_001168380.1| uncharacterized protein LOC100382149 [Zea mays]
gi|223947871|gb|ACN28019.1| unknown [Zea mays]
gi|413955892|gb|AFW88541.1| hypothetical protein ZEAMMB73_254585 [Zea mays]
Length = 651
Score = 345 bits (886), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 188/545 (34%), Positives = 297/545 (54%), Gaps = 36/545 (6%)
Query: 153 PNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSL 212
P+ T + ++ G + E +H +K + + L++MY C + AR +
Sbjct: 104 PDTYTHPLLAAACAARGDVREGLQVHSHSVKHGFSDNLYLRNALMHMYSACGCVASARRV 163
Query: 213 FDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSK---------------------- 250
FD + VSWN +L + + G VE A ++F R+P +
Sbjct: 164 FDAGPVWDAVSWNTILATYVRDGDVEQAVKVFTRMPERSAAAVSAMVALFARRGMVEEAR 223
Query: 251 ---------DVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAM 301
D +W M+ + + + EAL ++ M +G ++ ++V +++AC ++
Sbjct: 224 GVFDGAEHRDAFTWTAMVSCFERNDLFMEALAVFSDMREEGWPVDEAVMVSVVAACAKSG 283
Query: 302 AFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIK-DHIASWNALI 360
G H ++V+AG +Q +IH Y++C + AR F+ G DH SWN++I
Sbjct: 284 VIQNGEVCHGLVVRAGLGSRVNVQNVLIHMYSSCQDVVAARRLFDNGESLDHF-SWNSMI 342
Query: 361 AGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEI 420
+G+++NG +EDA+ LF+ M +D SWSAMI+G N Q + AL +F M +KP+++
Sbjct: 343 SGYLKNGRVEDAKALFDVMPDKDNVSWSAMIAGCVHNNQSSEALNVFDSMRAHEIKPDDV 402
Query: 421 TMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHI 480
T+VSV A ++ L++G+ HEY+ + L ++IDMY KCG + A EVF +
Sbjct: 403 TLVSVISACSNLSALEQGKLVHEYIRKYQYNITIVLGTSLIDMYMKCGCMEAALEVFDML 462
Query: 481 RDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKL-NSITFIGVLSTCCHAGLVD 539
++ T WNA+I GLAM+G +L ++S++E + N ITF GVLS C H GLV+
Sbjct: 463 EEKGTPC--WNAVIVGLAMNGLVTRSLDMFSEMEATGTAVPNEITFTGVLSACRHGGLVE 520
Query: 540 LGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAA 599
G ++FK M++ Y + P+++HYGCMVDLLGRAG + +AE++I+SMPM DV WG LL A
Sbjct: 521 EGRQFFKLMQNKYQIVPNIRHYGCMVDLLGRAGYVREAEDMIQSMPMSPDVPAWGALLGA 580
Query: 600 SRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLP 659
HG+ EVGER K L L P H + +LSNIYA G W+ +R M+ + ++
Sbjct: 581 CWKHGDSEVGERVGKKLVKLDPDHDGFQTMLSNIYASEGMWQCVKDLRGSMKQQHVAKVA 640
Query: 660 GFSGV 664
G S V
Sbjct: 641 GCSMV 645
Score = 221 bits (564), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 143/515 (27%), Positives = 242/515 (46%), Gaps = 63/515 (12%)
Query: 33 CSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVAC 92
C+A V +G Q+HS K G N +++N+L+++Y+ CG ++ A+ +FD+ D V+
Sbjct: 116 CAARGDVREGLQVHSHSVKHGFSDNLYLRNALMHMYSACGCVASARRVFDAGPVWDAVSW 175
Query: 93 NIMISGYIRNDRLNDAREVFDKTPIKC-------------------------------CV 121
N +++ Y+R+ + A +VF + P +
Sbjct: 176 NTILATYVRDGDVEQAVKVFTRMPERSAAAVSAMVALFARRGMVEEARGVFDGAEHRDAF 235
Query: 122 SYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLV 181
++T+M+ F +ND + EAL VF DMR G +E + SV+++ G I + HGLV
Sbjct: 236 TWTAMVSCFERNDLFMEALAVFSDMREEGWPVDEAVMVSVVAACAKSGVIQNGEVCHGLV 295
Query: 182 IKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELAR 241
++ + V + L++MY C +V AR LFD + + SWN M++G+ K G VE A+
Sbjct: 296 VRAGLGSRVNVQNVLIHMYSSCQDVVAARRLFDNGESLDHFSWNSMISGYLKNGRVEDAK 355
Query: 242 ELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAM 301
LF+ +P KD VSW MI G + + SEAL ++ +M I P+DV +V +ISAC
Sbjct: 356 ALFDVMPDKDNVSWSAMIAGCVHNNQSSEALNVFDSMRAHEIKPDDVTLVSVISACSNLS 415
Query: 302 AFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIA 361
A +G +H I K ++ + ++I Y CG + A F++ + WNA+I
Sbjct: 416 ALEQGKLVHEYIRKYQYNITIVLGTSLIDMYMKCGCMEAALEVFDMLEEKGTPCWNAVIV 475
Query: 362 GFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEIT 421
G NG++ + +F+ M+ +G A PNEIT
Sbjct: 476 GLAMNGLVTRSLDMFSEMEA----------TGTA--------------------VPNEIT 505
Query: 422 MVSVFCAIASSGTLKEGRWAHEYVLNN-SITLNDNLSAAIIDMYAKCGSINTAFEVFYHI 480
V A G ++EGR + + N I N ++D+ + G + A ++ +
Sbjct: 506 FTGVLSACRHGGLVEEGRQFFKLMQNKYQIVPNIRHYGCMVDLLGRAGYVREAEDMIQSM 565
Query: 481 RDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEK 515
+ V W A++ HGD+ + ++ L K
Sbjct: 566 -PMSPDVPAWGALLGACWKHGDSEVGERVGKKLVK 599
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 98/365 (26%), Positives = 176/365 (48%), Gaps = 36/365 (9%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E +VS + C+ + G+ H L+ ++GL S +QN LI++Y+ C + A+ +FD
Sbjct: 269 EAVMVSVVAACAKSGVIQNGEVCHGLVVRAGLGSRVNVQNVLIHMYSSCQDVVAARRLFD 328
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+ +LD + N MISGY++N R+ DA+ +FD P K VS+++MI G N+ EAL V
Sbjct: 329 NGESLDHFSWNSMISGYLKNGRVEDAKALFDVMPDKDNVSWSAMIAGCVHNNQSSEALNV 388
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
F MR + P++VTL SVIS+ +L + + +++H + K + +++ T+L++MY
Sbjct: 389 FDSMRAHEIKPDDVTLVSVISACSNLSALEQGKLVHEYIRKYQYNITIVLGTSLIDMYMK 448
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
C + A +FD ++E+ WN ++ G A GLV
Sbjct: 449 CGCMEAALEVFDMLEEKGTPCWNAVIVGLAMNGLV------------------------- 483
Query: 263 LQVERLSEALTMYRAMLCDGIA-PNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCY 321
+ +L M+ M G A PN++ ++SAC EG Q ++ + +
Sbjct: 484 ------TRSLDMFSEMEATGTAVPNEITFTGVLSACRHGGLVEEGRQFFKLM-QNKYQIV 536
Query: 322 DFIQ--ATIIHFYAACGRINLARLQFE-LGIKDHIASWNALIAGFIRNGMIEDARQLFNN 378
I+ ++ G + A + + + + +W AL+ ++G E ++
Sbjct: 537 PNIRHYGCMVDLLGRAGYVREAEDMIQSMPMSPDVPAWGALLGACWKHGDSEVGERVGKK 596
Query: 379 MQKRD 383
+ K D
Sbjct: 597 LVKLD 601
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 101/427 (23%), Positives = 182/427 (42%), Gaps = 69/427 (16%)
Query: 242 ELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAM 301
+LF + S + + T++ L+ +Y +M AP+ L +AC
Sbjct: 64 QLFGLVRSPNAFTCNTLLKAALRQGFPHLCFPLYASM---PAAPDTYTHPLLAAACAARG 120
Query: 302 AFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIA 361
EGLQ+HS VK GF +++ ++H Y+ACG + AR F+ G SWN ++A
Sbjct: 121 DVREGLQVHSHSVKHGFSDNLYLRNALMHMYSACGCVASARRVFDAGPVWDAVSWNTILA 180
Query: 362 GFIRNG-------------------------------MIEDARQLFNNMQKRDVYSWSAM 390
++R+G M+E+AR +F+ + RD ++W+AM
Sbjct: 181 TYVRDGDVEQAVKVFTRMPERSAAAVSAMVALFARRGMVEEARGVFDGAEHRDAFTWTAM 240
Query: 391 ISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSI 450
+S + +N+ AL +F M + G +E MVSV A A SG ++ G H V+ +
Sbjct: 241 VSCFERNDLFMEALAVFSDMREEGWPVDEAVMVSVVAACAKSGVIQNGEVCHGLVVRAGL 300
Query: 451 TLNDNLSAAIIDMYAKCGSINTAFEVF------------------------------YHI 480
N+ +I MY+ C + A +F + +
Sbjct: 301 GSRVNVQNVLIHMYSSCQDVVAARRLFDNGESLDHFSWNSMISGYLKNGRVEDAKALFDV 360
Query: 481 RDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDL 540
+VS W+A+I G + ++ L ++ + IK + +T + V+S C + ++
Sbjct: 361 MPDKDNVS-WSAMIAGCVHNNQSSEALNVFDSMRAHEIKPDDVTLVSVISACSNLSALEQ 419
Query: 541 GERYFKSM-KSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAA 599
G+ + + K YN+ L ++D+ + G +E A EV + K W ++
Sbjct: 420 GKLVHEYIRKYQYNITIVLG--TSLIDMYMKCGCMEAALEVFDMLEEKG-TPCWNAVIVG 476
Query: 600 SRIHGNV 606
++G V
Sbjct: 477 LAMNGLV 483
>gi|356540333|ref|XP_003538644.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Glycine max]
Length = 721
Score = 345 bits (885), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 170/427 (39%), Positives = 264/427 (61%), Gaps = 2/427 (0%)
Query: 231 FAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMI 290
+A G + AR LF+++ +DVV+W MIDGY Q L +Y M G P+ +++
Sbjct: 161 YAACGRIMDARFLFDKMSHRDVVTWNIMIDGYSQNAHYDHVLKLYEEMKTSGTEPDAIIL 220
Query: 291 VDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIK 350
++SAC A G IH I GF IQ ++++ YA CG ++LAR ++
Sbjct: 221 CTVLSACAHAGNLSYGKAIHQFIKDNGFRVGSHIQTSLVNMYANCGAMHLAREVYDQLPS 280
Query: 351 DHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGM 410
H+ A+++G+ + GM++DAR +F+ M ++D+ WSAMISGYA++ QP AL+LF+ M
Sbjct: 281 KHMVVSTAMLSGYAKLGMVQDARFIFDRMVEKDLVCWSAMISGYAESYQPLEALQLFNEM 340
Query: 411 VDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSI 470
+ P++ITM+SV A A+ G L + +W H Y N ++ A+IDMYAKCG++
Sbjct: 341 QRRRIVPDQITMLSVISACANVGALVQAKWIHTYADKNGFGRTLPINNALIDMYAKCGNL 400
Query: 471 NTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLS 530
A EVF ++ + +V W+++I AMHGDA+ + ++ ++++NI+ N +TFIGVL
Sbjct: 401 VKAREVFENMPRK--NVISWSSMINAFAMHGDADSAIALFHRMKEQNIEPNGVTFIGVLY 458
Query: 531 TCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADV 590
C HAGLV+ G+++F SM + + + P +HYGCMVDL RA L A E+I +MP +V
Sbjct: 459 ACSHAGLVEEGQKFFSSMINEHRISPQREHYGCMVDLYCRANHLRKAMELIETMPFPPNV 518
Query: 591 VIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEM 650
+IWG+L++A + HG +E+GE AA L L+P H + V+LSNIYA RW+D +RK M
Sbjct: 519 IIWGSLMSACQNHGEIELGEFAATRLLELEPDHDGALVVLSNIYAKEKRWDDVGLVRKLM 578
Query: 651 RDCGMKR 657
+ G+ +
Sbjct: 579 KHKGVSK 585
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 137/486 (28%), Positives = 228/486 (46%), Gaps = 81/486 (16%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGL-ESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLD 88
L+ S A++ G +IH L K G ++ FIQ++LI +YA CG I A+ +FD S D
Sbjct: 122 LKAVSKLSALNLGLEIHGLASKFGFFHADPFIQSALIAMYAACGRIMDARFLFDKMSHRD 181
Query: 89 PVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRI 148
V NIMI GY +QN + L+++ +M+
Sbjct: 182 VVTWNIMIDGY-------------------------------SQNAHYDHVLKLYEEMKT 210
Query: 149 LGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVI---ISTNLLNMYCVCSS 205
G P+ + L +V+S+ H G + + +H + +GF + I T+L+NMY C +
Sbjct: 211 SGTEPDAIILCTVLSACAHAGNLSYGKAIHQFIKD---NGFRVGSHIQTSLVNMYANCGA 267
Query: 206 LVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQV 265
+ AR ++D++ +++V ML+G+AK G+V+ AR +F+R+ KD+V W MI GY +
Sbjct: 268 MHLAREVYDQLPSKHMVVSTAMLSGYAKLGMVQDARFIFDRMVEKDLVCWSAMISGYAES 327
Query: 266 ERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQ 325
+ EAL ++ M I P+ + ++ +ISAC A + IH+ K GF I
Sbjct: 328 YQPLEALQLFNEMQRRRIVPDQITMLSVISACANVGALVQAKWIHTYADKNGFGRTLPIN 387
Query: 326 ATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVY 385
+I YA CG + AR FE + ++ SW+++I F +G DA
Sbjct: 388 NALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAMHG---DA------------- 431
Query: 386 SWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYV 445
+ A+ LFH M + ++PN +T + V A + +G ++EG+ +
Sbjct: 432 ---------------DSAIALFHRMKEQNIEPNGVTFIGVLYACSHAGLVEEGQKFFSSM 476
Query: 446 LN-NSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAM----- 499
+N + I+ ++D+Y + + A E+ T P N II G M
Sbjct: 477 INEHRISPQREHYGCMVDLYCRANHLRKAMELI------ETMPFPPNVIIWGSLMSACQN 530
Query: 500 HGDANL 505
HG+ L
Sbjct: 531 HGEIEL 536
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 80/260 (30%), Positives = 143/260 (55%), Gaps = 1/260 (0%)
Query: 4 DHFHSVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNS 63
DH ++ K + D + L + L C+ +S G+ IH I +G + IQ S
Sbjct: 199 DHVLKLYEEMKTSGTEPD-AIILCTVLSACAHAGNLSYGKAIHQFIKDNGFRVGSHIQTS 257
Query: 64 LINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSY 123
L+N+YA CG + A+ ++D + V M+SGY + + DAR +FD+ K V +
Sbjct: 258 LVNMYANCGAMHLAREVYDQLPSKHMVVSTAMLSGYAKLGMVQDARFIFDRMVEKDLVCW 317
Query: 124 TSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIK 183
++MI G+A++ EAL++F +M+ ++P+++T+ SVIS+ ++G + + + +H K
Sbjct: 318 SAMISGYAESYQPLEALQLFNEMQRRRIVPDQITMLSVISACANVGALVQAKWIHTYADK 377
Query: 184 LMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELAREL 243
+ I+ L++MY C +LV+AR +F+ M +N++SW+ M+N FA G + A L
Sbjct: 378 NGFGRTLPINNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAMHGDADSAIAL 437
Query: 244 FERIPSKDVVSWGTMIDGYL 263
F R+ +++ G G L
Sbjct: 438 FHRMKEQNIEPNGVTFIGVL 457
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/401 (23%), Positives = 175/401 (43%), Gaps = 63/401 (15%)
Query: 237 VELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISA 296
++ A LF IP+ ++ + + L++Y + +G + L+ A
Sbjct: 65 LDYALSLFSHIPNPPTRFSNQLLRQFSRGPTPENTLSLYLHLRRNGFPLDRFSFPPLLKA 124
Query: 297 CGRAMAFGEGLQIHSIIVKAGFDCYD-FIQATIIHFYAACGRINLARLQFELGIKDHIAS 355
+ A GL+IH + K GF D FIQ+ +I YAACGRI AR F+ + +
Sbjct: 125 VSKLSALNLGLEIHGLASKFGFFHADPFIQSALIAMYAACGRIMDARFLFDKMSHRDVVT 184
Query: 356 WNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGV 415
WN +I G Y+QN + L+L+ M +G
Sbjct: 185 WNIMIDG-------------------------------YSQNAHYDHVLKLYEEMKTSGT 213
Query: 416 KPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFE 475
+P+ I + +V A A +G L G+ H+++ +N + ++ ++++MYA CG+++ A E
Sbjct: 214 EPDAIILCTVLSACAHAGNLSYGKAIHQFIKDNGFRVGSHIQTSLVNMYANCGAMHLARE 273
Query: 476 VFYHIRDRTTSVSP-----------------------------WNAIICGLAMHGDANLT 506
V+ + + VS W+A+I G A
Sbjct: 274 VYDQLPSKHMVVSTAMLSGYAKLGMVQDARFIFDRMVEKDLVCWSAMISGYAESYQPLEA 333
Query: 507 LKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVD 566
L++++++++R I + IT + V+S C + G + + ++ + L ++D
Sbjct: 334 LQLFNEMQRRRIVPDQITMLSVISACANVGAL-VQAKWIHTYADKNGFGRTLPINNALID 392
Query: 567 LLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVE 607
+ + G L A EV +MP K +V+ W +++ A +HG+ +
Sbjct: 393 MYAKCGNLVKAREVFENMPRK-NVISWSSMINAFAMHGDAD 432
>gi|147836314|emb|CAN59994.1| hypothetical protein VITISV_012660 [Vitis vinifera]
Length = 768
Score = 345 bits (884), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 202/640 (31%), Positives = 335/640 (52%), Gaps = 67/640 (10%)
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
++ NI IS Y + +L+ AR++FD+ P + VS+ +MI ++++ + EAL + M
Sbjct: 73 ISTNIAISNYAKQSKLDVARQLFDQMPQRTVVSWNTMISSYSKHGRFSEALFLVYSMHRS 132
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
+ +E T +SV+S L + + +++H LV+K + F ++ + LL Y C + EA
Sbjct: 133 HMKLSESTFSSVLSVCARLRCLRDGKLIHCLVLKSGSESFELVGSALLYFYASCFEIGEA 192
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQV-ERL 268
R +FD + RN V W++ML G+ +++ A +F ++P +DVV+W T+I G+ + +
Sbjct: 193 RRVFDVLVRRNEVLWSLMLVGYVTCNVMDDALSVFVKMPRRDVVAWTTLISGFSKNGDGC 252
Query: 269 SEALTMYRAMLCDG-IAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQAT 327
+AL M+R M+ G PN+ ++ ACGR G +H +++K G + I
Sbjct: 253 GKALEMFRLMMRSGETTPNEFTFDCVVRACGRLGILSVGRTVHGLLMKCGLEYDPSIGGA 312
Query: 328 IIHFYAAC-------------------------------GRINLARLQFELGIKDHIASW 356
++ FY C GRI A L F + + S+
Sbjct: 313 LVEFYCECEAIDDALRVCKGVVNPCLNALNSLIEGLISMGRIEDAELVFNGMTEMNPVSY 372
Query: 357 NALIAGFIRNGMIEDARQLFNNMQKRDVYS------------------------------ 386
N +I G+ G ++D+++LF M R ++S
Sbjct: 373 NLMIKGYAVGGQMDDSKRLFEKMPCRTIFSSNTMISVYSRNGEIDKALELFEETKNEKDP 432
Query: 387 --WSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEY 444
W++MISGY + QP AL+L+ M ++ T ++F A + G+L++G+ H +
Sbjct: 433 VTWNSMISGYIHSGQPEEALKLYITMHRLSIQQTRSTFSALFHACSCLGSLQQGQLLHAH 492
Query: 445 VLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDAN 504
++ N + ++IDMY+KCGSI A F I + +V+ W A+I G A HG +
Sbjct: 493 LIKTPFESNVYVGTSLIDMYSKCGSIMEAQTSFVSI--FSPNVAAWTALINGHAYHGLGS 550
Query: 505 LTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCM 564
+ ++ + ++ + N TF+GVLS C AGLV+ G + F SM+ Y+V P L+HY C+
Sbjct: 551 EAISLFDXMIEQGLAPNGATFVGVLSACSRAGLVNEGMKIFHSMERCYSVTPTLEHYACV 610
Query: 565 VDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHG 624
VDLLGR+G + +AEE I+ MP++AD V+WG LL+A ++EVGER A+ + P
Sbjct: 611 VDLLGRSGHIREAEEFIKKMPLEADGVVWGALLSACWFWMDLEVGERVAEKMFSFDPKPI 670
Query: 625 PSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
S V+LSNIYA GRW + +RK +R +K+ PG S +
Sbjct: 671 SSYVILSNIYAGLGRWREKMMVRKILRGFKVKKDPGCSWI 710
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 141/533 (26%), Positives = 236/533 (44%), Gaps = 99/533 (18%)
Query: 9 VFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLY 68
V++ +++++ S E S L C+ + G+ IH L+ KSG ES + ++L+ Y
Sbjct: 126 VYSMHRSHMKLS--ESTFSSVLSVCARLRCLRDGKLIHCLVLKSGSESFELVGSALLYFY 183
Query: 69 AKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIM 128
A C I +A+ +FD + V ++M+ GY+ + ++DA VF K P + V++T++I
Sbjct: 184 ASCFEIGEARRVFDVLVRRNEVLWSLMLVGYVTCNVMDDALSVFVKMPRRDVVAWTTLIS 243
Query: 129 GFAQN-DCWREALEVFRDMRILG-VIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMI 186
GF++N D +ALE+FR M G PNE T V+ + LG + R +HGL++K +
Sbjct: 244 GFSKNGDGCGKALEMFRLMMRSGETTPNEFTFDCVVRACGRLGILSVGRTVHGLLMKCGL 303
Query: 187 DGFVIISTNLLNMYCVC---------------------SSLVE----------ARSLFDE 215
+ I L+ YC C +SL+E A +F+
Sbjct: 304 EYDPSIGGALVEFYCECEAIDDALRVCKGVVNPCLNALNSLIEGLISMGRIEDAELVFNG 363
Query: 216 MKERNIVSWNVMLNGFAKAGLVELARELFERIP--------------------------- 248
M E N VS+N+M+ G+A G ++ ++ LFE++P
Sbjct: 364 MTEMNPVSYNLMIKGYAVGGQMDDSKRLFEKMPCRTIFSSNTMISVYSRNGEIDKALELF 423
Query: 249 -----SKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAF 303
KD V+W +MI GY+ + EAL +Y M I L AC +
Sbjct: 424 EETKNEKDPVTWNSMISGYIHSGQPEEALKLYITMHRLSIQQTRSTFSALFHACSCLGSL 483
Query: 304 GEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGF 363
+G +H+ ++K F+ ++ ++I Y+ CG I A+ F ++A+W ALI G
Sbjct: 484 QQGQLLHAHLIKTPFESNVYVGTSLIDMYSKCGSIMEAQTSFVSIFSPNVAAWTALINGH 543
Query: 364 IRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMV 423
+G+ + A+ LF M++ G+ PN T V
Sbjct: 544 AYHGLGSE-------------------------------AISLFDXMIEQGLAPNGATFV 572
Query: 424 SVFCAIASSGTLKEG-RWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFE 475
V A + +G + EG + H S+T A ++D+ + G I A E
Sbjct: 573 GVLSACSRAGLVNEGMKIFHSMERCYSVTPTLEHYACVVDLLGRSGHIREAEE 625
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 101/394 (25%), Positives = 206/394 (52%), Gaps = 23/394 (5%)
Query: 221 IVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLC 280
I+S N+ ++ +AK +++AR+LF+++P + VVSW TMI Y + R SEAL + +M
Sbjct: 72 IISTNIAISNYAKQSKLDVARQLFDQMPQRTVVSWNTMISSYSKHGRFSEALFLVYSMHR 131
Query: 281 DGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINL 340
+ ++ ++S C R +G IH +++K+G + ++ + + +++FYA+C I
Sbjct: 132 SHMKLSESTFSSVLSVCARLRCLRDGKLIHCLVLKSGSESFELVGSALLYFYASCFEIGE 191
Query: 341 ARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQN-EQ 399
AR F++ ++ + W+ ++ G++ +++DA +F M +RDV +W+ +ISG+++N +
Sbjct: 192 ARRVFDVLVRRNEVLWSLMLVGYVTCNVMDDALSVFVKMPRRDVVAWTTLISGFSKNGDG 251
Query: 400 PNMALELFHGMVDAG-VKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSA 458
ALE+F M+ +G PNE T V A G L GR H ++ + + ++
Sbjct: 252 CGKALEMFRLMMRSGETTPNEFTFDCVVRACGRLGILSVGRTVHGLLMKCGLEYDPSIGG 311
Query: 459 AIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHG---DANLTLKIYSDLEK 515
A+++ Y +C +I+ A V + + ++ N++I GL G DA L ++
Sbjct: 312 ALVEFYCECEAIDDALRVCKGVVN--PCLNALNSLIEGLISMGRIEDAELVFNGMTE--- 366
Query: 516 RNIKLNSITFIGVLSTCCHAGLVDLGERYFKSM--KSVYNVEPDLKHYGCMVDLLGRAGQ 573
+N +++ ++ G +D +R F+ M +++++ M+ + R G+
Sbjct: 367 ----MNPVSYNLMIKGYAVGGQMDDSKRLFEKMPCRTIFSSNT-------MISVYSRNGE 415
Query: 574 LEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVE 607
++ A E+ + D V W ++++ G E
Sbjct: 416 IDKALELFEETKNEKDPVTWNSMISGYIHSGQPE 449
>gi|224057446|ref|XP_002299231.1| predicted protein [Populus trichocarpa]
gi|222846489|gb|EEE84036.1| predicted protein [Populus trichocarpa]
Length = 668
Score = 345 bits (884), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 170/473 (35%), Positives = 290/473 (61%), Gaps = 9/473 (1%)
Query: 199 MYCVCSSLVEARSLFDEMKE-------RNIVSWNVMLNGFAKAGLVELARELFERIPSKD 251
++ VC++LV + F+ + + +++ +N +++ G LA ++F+ +D
Sbjct: 160 LFKVCANLVLSYMGFEILGQVLKMGFDKDMYLYNGIIHMLVSVGESGLAHKVFDEGCVRD 219
Query: 252 VVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHS 311
+VSW ++I+GY++ + EA+ +Y+ M+ + + P++V ++ ++SAC + + G +IH
Sbjct: 220 LVSWNSLINGYVRRRQPREAMGIYQQMITEHVKPDEVTMIGVVSACAQLESLKLGREIHR 279
Query: 312 IIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIED 371
I ++G + + ++ Y CG + ++ F+ K + SW +I G+ +NG+++
Sbjct: 280 YIEESGLNLKISLVNALMDMYVKCGDLEAGKVLFDNMRKKTVVSWTTMIVGYAKNGLLDM 339
Query: 372 ARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIAS 431
A +LF++M +++V +W+AMI Q ALELF M + +KP+++TM+ A +
Sbjct: 340 AGKLFHDMPEKNVVAWNAMIGSCVQANLSFEALELFREMQWSNMKPDKVTMLHCLSACSQ 399
Query: 432 SGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWN 491
G L G W H Y+ ++++L+ L A+IDMYAKCG++ A +VF + R + W
Sbjct: 400 LGALDTGMWTHNYIKKHNLSLDVALGTALIDMYAKCGNMTKALQVFNEMPRRNSLT--WT 457
Query: 492 AIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSV 551
AII GLA++G+ N + +S + + + ITF+GVL+ CCH GLV+ G +YF MKS
Sbjct: 458 AIIGGLALYGNVNDAIFYFSKMIDSGLMPDEITFLGVLTACCHGGLVEEGRKYFDQMKSR 517
Query: 552 YNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGER 611
+N+ P KHY CMV+LLGRAG LE+AEE+I++MPM+AD ++WG L A IH N+ +GER
Sbjct: 518 FNLSPQPKHYSCMVNLLGRAGLLEEAEELIKTMPMEADAMVWGALFFACGIHRNLLIGER 577
Query: 612 AAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
AA L L P VLL+N+Y +AG+WE+A +IRK M + G+++ PG S +
Sbjct: 578 AASKLLDLDPHDSGIYVLLANMYREAGKWEEAQNIRKMMMERGVEKTPGSSSI 630
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 95/332 (28%), Positives = 162/332 (48%), Gaps = 31/332 (9%)
Query: 108 AREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVH 167
A +VFD+ ++ VS+ S+I G+ + REA+ +++ M V P+EVT+ V+S+
Sbjct: 208 AHKVFDEGCVRDLVSWNSLINGYVRRRQPREAMGIYQQMITEHVKPDEVTMIGVVSACAQ 267
Query: 168 LGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVM 227
L + R +H + + ++ + + L++MY C L + LFD M+++ +VSW M
Sbjct: 268 LESLKLGREIHRYIEESGLNLKISLVNALMDMYVKCGDLEAGKVLFDNMRKKTVVSWTTM 327
Query: 228 LNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPND 287
+ G+AK GL+++A +LF +P K+VV+W MI +Q EAL ++R M + P+
Sbjct: 328 IVGYAKNGLLDMAGKLFHDMPEKNVVAWNAMIGSCVQANLSFEALELFREMQWSNMKPDK 387
Query: 288 VMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFEL 347
V ++ +SAC + A G+ H+ I K + +I YA CG + A F
Sbjct: 388 VTMLHCLSACSQLGALDTGMWTHNYIKKHNLSLDVALGTALIDMYAKCGNMTKALQVFNE 447
Query: 348 GIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELF 407
+ + +W A+I G G + D A+ F
Sbjct: 448 MPRRNSLTWTAIIGGLALYGNVND-------------------------------AIFYF 476
Query: 408 HGMVDAGVKPNEITMVSVFCAIASSGTLKEGR 439
M+D+G+ P+EIT + V A G ++EGR
Sbjct: 477 SKMIDSGLMPDEITFLGVLTACCHGGLVEEGR 508
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 107/459 (23%), Positives = 196/459 (42%), Gaps = 83/459 (18%)
Query: 191 IISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELAR--------- 241
++S LL++ C S + + + +M + ++L+GFA + L+
Sbjct: 51 VLSNPLLSLLENCKSFSQLKQIQAQM-----ILTGLILDGFASSRLISFCAISESRNLDY 105
Query: 242 --ELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCD-GIAPNDVMIVDLISACG 298
++ + + +V SW +I G ++ E + L +Y+ ML G P++ L C
Sbjct: 106 CIKILNNLQNPNVFSWNAVIRGCVESENPQKGLVLYKRMLTRAGCRPDNYTYSFLFKVCA 165
Query: 299 RAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNA 358
+ G +I ++K GFD ++ IIH + G LA F+ G + SWN+
Sbjct: 166 NLVLSYMGFEILGQVLKMGFDKDMYLYNGIIHMLVSVGESGLAHKVFDEGCVRDLVSWNS 225
Query: 359 LIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPN 418
LI G++R QP A+ ++ M+ VKP+
Sbjct: 226 LINGYVR-------------------------------RRQPREAMGIYQQMITEHVKPD 254
Query: 419 EITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFY 478
E+TM+ V A A +LK GR H Y+ + + L +L A++DMY KCG + +F
Sbjct: 255 EVTMIGVVSACAQLESLKLGREIHRYIEESGLNLKISLVNALMDMYVKCGDLEAGKVLFD 314
Query: 479 HIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNI-------------------- 518
++R +T V W +I G A +G ++ K++ D+ ++N+
Sbjct: 315 NMRKKT--VVSWTTMIVGYAKNGLLDMAGKLFHDMPEKNVVAWNAMIGSCVQANLSFEAL 372
Query: 519 -----------KLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDL 567
K + +T + LS C G +D G +K +N+ D+ ++D+
Sbjct: 373 ELFREMQWSNMKPDKVTMLHCLSACSQLGALDTGMWTHNYIKK-HNLSLDVALGTALIDM 431
Query: 568 LGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNV 606
+ G + A +V MP + + + W ++ ++GNV
Sbjct: 432 YAKCGNMTKALQVFNEMP-RRNSLTWTAIIGGLALYGNV 469
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 86/370 (23%), Positives = 168/370 (45%), Gaps = 62/370 (16%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E+ ++ + C+ ++ G++IH I +SGL + N+L+++Y KCG + K +FD
Sbjct: 255 EVTMIGVVSACAQLESLKLGREIHRYIEESGLNLKISLVNALMDMYVKCGDLEAGKVLFD 314
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+ V+ MI GY +N L+ A ++F P K V++ +MI Q + EALE+
Sbjct: 315 NMRKKTVVSWTTMIVGYAKNGLLDMAGKLFHDMPEKNVVAWNAMIGSCVQANLSFEALEL 374
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
FR+M+ + P++VT+ +S+ LG + H + K + V + T L++MY
Sbjct: 375 FREMQWSNMKPDKVTMLHCLSACSQLGALDTGMWTHNYIKKHNLSLDVALGTALIDMYAK 434
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
C ++ +A +F+EM RN ++W ++ G A G
Sbjct: 435 CGNMTKALQVFNEMPRRNSLTWTAIIGGLALYG--------------------------- 467
Query: 263 LQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD 322
+++A+ + M+ G+ P+++ + +++AC H +V+ G +D
Sbjct: 468 ----NVNDAIFYFSKMIDSGLMPDEITFLGVLTAC-----------CHGGLVEEGRKYFD 512
Query: 323 FIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ-K 381
+++ R NL+ ++ ++ R G++E+A +L M +
Sbjct: 513 QMKS----------RFNLS---------PQPKHYSCMVNLLGRAGLLEEAEELIKTMPME 553
Query: 382 RDVYSWSAMI 391
D W A+
Sbjct: 554 ADAMVWGALF 563
>gi|125564656|gb|EAZ10036.1| hypothetical protein OsI_32340 [Oryza sativa Indica Group]
Length = 644
Score = 344 bits (883), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 190/558 (34%), Positives = 302/558 (54%), Gaps = 35/558 (6%)
Query: 108 AREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVH 167
AR++FD+ P Y S+I + + C +EAL + R M G++PNE TL ++ +
Sbjct: 63 ARQLFDRIPDPDRFVYNSLIRAYCNSHCPQEALPLLRGMIRRGILPNEFTLPFLLKACAR 122
Query: 168 LGGIWECRML-HGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNV 226
+ WE M+ HG+V+KL G V + LL+ Y SL ++R FDEM +RN+VSWN
Sbjct: 123 VQA-WEHVMVTHGVVVKLGFVGQVFVGNALLHSYASAGSLGDSRRFFDEMVDRNVVSWNS 181
Query: 227 MLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPN 286
M+NG+A+AG EA +++ M G+ +
Sbjct: 182 MINGYAQAG-------------------------------NTREACSLFEGMRRQGLLAD 210
Query: 287 DVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFE 346
+ +V L+ AC G +HS ++ G + ++ Y CG + +A F+
Sbjct: 211 EFTLVSLLFACSAEGNLEFGKLVHSHLLVRGCRIDLILANALVDMYGKCGDLLMAHTCFD 270
Query: 347 LGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALEL 406
+ + SW +++ + I+ AR F + ++ + SW+AMIS Y Q + + AL+L
Sbjct: 271 MMPFKNAVSWTSMLCALAKRASIDAARDWFEQIPEKSIISWNAMISCYVQGGRFHEALDL 330
Query: 407 FHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAK 466
++ M G+ P+E T+ +V A G L G+ H+ + +N L +++DMYA+
Sbjct: 331 YNRMKLLGLAPDEFTLAAVLSACGQLGDLASGKMIHDCIRDNFHNPGVALFNSLLDMYAR 390
Query: 467 CGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFI 526
CG ++TA +F + + +V WNAII LAMHG A L + + + ITF+
Sbjct: 391 CGQVDTAISLFSEMPSK--NVISWNAIIGALAMHGRAQDALMFFRSMVSDAFPPDEITFV 448
Query: 527 GVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPM 586
+LS C H GL++ G+ YF++M+ VYNV+P ++HY CMVDLLGR GQL A ++I+ MPM
Sbjct: 449 ALLSACNHGGLLEAGQYYFQAMRHVYNVKPGVEHYACMVDLLGRGGQLAKAVDLIKDMPM 508
Query: 587 KADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSI 646
+ DVV+WG LL A RIHG++++G++ K L L+ G VL+SN+ + +WED +
Sbjct: 509 RPDVVVWGALLGACRIHGHIQIGKQVIKQLLELEGMSGGLFVLISNMLYETHQWEDMKRL 568
Query: 647 RKEMRDCGMKRLPGFSGV 664
RK MR+ GMK+ G S +
Sbjct: 569 RKLMREWGMKKNMGVSSI 586
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 133/496 (26%), Positives = 215/496 (43%), Gaps = 72/496 (14%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E L L+ C+ A H ++ K G F+ N+L++ YA G
Sbjct: 110 EFTLPFLLKACARVQAWEHVMVTHGVVVKLGFVGQVFVGNALLHSYASAG---------- 159
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
L D+R FD+ + VS+ SMI G+AQ REA +
Sbjct: 160 ---------------------SLGDSRRFFDEMVDRNVVSWNSMINGYAQAGNTREACSL 198
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHG--LVIKLMIDGFVIISTNLLNMY 200
F MR G++ +E TL S++ + G + +++H LV ID +I++ L++MY
Sbjct: 199 FEGMRRQGLLADEFTLVSLLFACSAEGNLEFGKLVHSHLLVRGCRID--LILANALVDMY 256
Query: 201 CVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMID 260
C L+ A + FD M +N VSW ML AK ++ AR+ FE+IP K ++SW MI
Sbjct: 257 GKCGDLLMAHTCFDMMPFKNAVSWTSMLCALAKRASIDAARDWFEQIPEKSIISWNAMIS 316
Query: 261 GYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDC 320
Y+Q R EAL +Y M G+AP++ + ++SACG+ G IH I +
Sbjct: 317 CYVQGGRFHEALDLYNRMKLLGLAPDEFTLAAVLSACGQLGDLASGKMIHDCIRDNFHNP 376
Query: 321 YDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ 380
+ +++ YA CG+++ A F ++ SWNA+I +G +D
Sbjct: 377 GVALFNSLLDMYARCGQVDTAISLFSEMPSKNVISWNAIIGALAMHGRAQD--------- 427
Query: 381 KRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRW 440
AL F MV P+EIT V++ A G L+ G++
Sbjct: 428 ----------------------ALMFFRSMVSDAFPPDEITFVALLSACNHGGLLEAGQY 465
Query: 441 ---AHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGL 497
A +V N + A ++D+ + G + A ++ + R V W A++
Sbjct: 466 YFQAMRHVYN--VKPGVEHYACMVDLLGRGGQLAKAVDLIKDMPMRPDVVV-WGALLGAC 522
Query: 498 AMHGDANLTLKIYSDL 513
+HG + ++ L
Sbjct: 523 RIHGHIQIGKQVIKQL 538
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 101/405 (24%), Positives = 181/405 (44%), Gaps = 66/405 (16%)
Query: 234 AGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDL 293
G V AR+LF+RIP D + ++I Y EAL + R M+ GI PN+ + L
Sbjct: 57 GGGVWYARQLFDRIPDPDRFVYNSLIRAYCNSHCPQEALPLLRGMIRRGILPNEFTLPFL 116
Query: 294 ISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHI 353
+ AC R A+ + H ++VK GF F+ ++H YA+ G + +R F+ + ++
Sbjct: 117 LKACARVQAWEHVMVTHGVVVKLGFVGQVFVGNALLHSYASAGSLGDSRRFFDEMVDRNV 176
Query: 354 ASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDA 413
SWN++I G+ + G +A LF M+++
Sbjct: 177 VSWNSMINGYAQAGNTREACSLFEGMRRQ------------------------------- 205
Query: 414 GVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCG----- 468
G+ +E T+VS+ A ++ G L+ G+ H ++L ++ L+ A++DMY KCG
Sbjct: 206 GLLADEFTLVSLLFACSAEGNLEFGKLVHSHLLVRGCRIDLILANALVDMYGKCGDLLMA 265
Query: 469 --------------------------SINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGD 502
SI+ A + F I ++ S+ WNA+I G
Sbjct: 266 HTCFDMMPFKNAVSWTSMLCALAKRASIDAARDWFEQIPEK--SIISWNAMISCYVQGGR 323
Query: 503 ANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYG 562
+ L +Y+ ++ + + T VLS C G + G+ ++ ++ P + +
Sbjct: 324 FHEALDLYNRMKLLGLAPDEFTLAAVLSACGQLGDLASGKMIHDCIRDNFH-NPGVALFN 382
Query: 563 CMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVE 607
++D+ R GQ++ A + MP K +V+ W ++ A +HG +
Sbjct: 383 SLLDMYARCGQVDTAISLFSEMPSK-NVISWNAIIGALAMHGRAQ 426
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 135/308 (43%), Gaps = 21/308 (6%)
Query: 353 IASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVD 412
+AS+ AL AG G + ARQLF+ + D + ++++I Y + P AL L GM+
Sbjct: 48 LASYCALPAG----GGVWYARQLFDRIPDPDRFVYNSLIRAYCNSHCPQEALPLLRGMIR 103
Query: 413 AGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINT 472
G+ PNE T+ + A A + H V+ + A++ YA GS+
Sbjct: 104 RGILPNEFTLPFLLKACARVQAWEHVMVTHGVVVKLGFVGQVFVGNALLHSYASAGSLGD 163
Query: 473 AFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTC 532
+ F + DR +V WN++I G A G+ ++ + ++ + + T + +L C
Sbjct: 164 SRRFFDEMVDR--NVVSWNSMINGYAQAGNTREACSLFEGMRRQGLLADEFTLVSLLFAC 221
Query: 533 CHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVI 592
G ++ G + S V DL +VD+ G+ G L A MP K + V
Sbjct: 222 SAEGNLEFG-KLVHSHLLVRGCRIDLILANALVDMYGKCGDLLMAHTCFDMMPFK-NAVS 279
Query: 593 WGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLS-----NIYADAGRWEDAFSIR 647
W ++L A + +RA+ A P + ++S + Y GR+ +A +
Sbjct: 280 WTSMLCA--------LAKRASIDAARDWFEQIPEKSIISWNAMISCYVQGGRFHEALDLY 331
Query: 648 KEMRDCGM 655
M+ G+
Sbjct: 332 NRMKLLGL 339
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/244 (20%), Positives = 102/244 (41%), Gaps = 43/244 (17%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E L + L C ++ G+ IH I + + NSL+++YA+CG + A S+F
Sbjct: 343 EFTLAAVLSACGQLGDLASGKMIHDCIRDNFHNPGVALFNSLLDMYARCGQVDTAISLFS 402
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+ P K +S+ ++I A + ++AL
Sbjct: 403 -------------------------------EMPSKNVISWNAIIGALAMHGRAQDALMF 431
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWEC------RMLHGLVIKLMIDGFVIISTNL 196
FR M P+E+T +++S+ H GG+ E M H +K ++ + +
Sbjct: 432 FRSMVSDAFPPDEITFVALLSACNH-GGLLEAGQYYFQAMRHVYNVKPGVEHYAC----M 486
Query: 197 LNMYCVCSSLVEARSLFDEMKER-NIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSW 255
+++ L +A L +M R ++V W +L G +++ +++ +++ + +S
Sbjct: 487 VDLLGRGGQLAKAVDLIKDMPMRPDVVVWGALLGACRIHGHIQIGKQVIKQLLELEGMSG 546
Query: 256 GTMI 259
G +
Sbjct: 547 GLFV 550
>gi|359482004|ref|XP_002276764.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Vitis vinifera]
Length = 681
Score = 344 bits (883), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 203/641 (31%), Positives = 319/641 (49%), Gaps = 96/641 (14%)
Query: 25 ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSC 84
AL ++ + + +G+Q+H+L+ +G TF+ N L+N+Y+KCG
Sbjct: 7 ALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCG------------ 54
Query: 85 STLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFR 144
L+ A ++FD P + VS+T+MI G +QN + EA+ F
Sbjct: 55 -------------------ELDHALKLFDTMPQRNLVSWTAMISGLSQNSKFSEAIRTFC 95
Query: 145 DMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCS 204
MRI G +P + +S I + LG I + +H L +K I + + +NL +MY C
Sbjct: 96 GMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCG 155
Query: 205 SLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQ 264
++ +A +F+EM P KD VSW MIDGY +
Sbjct: 156 AMFDACKVFEEM-------------------------------PCKDEVSWTAMIDGYSK 184
Query: 265 VERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFI 324
+ EAL ++ M+ + + + ++ + ACG A G +HS +VK GF+ F+
Sbjct: 185 IGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFV 244
Query: 325 QATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFN-NMQKRD 383
NAL + + G +E A +F + + R+
Sbjct: 245 G-------------------------------NALTDMYSKAGDMESASNVFGIDSECRN 273
Query: 384 VYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHE 443
V S++ +I GY + EQ L +F + G++PNE T S+ A A+ L++G H
Sbjct: 274 VVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHA 333
Query: 444 YVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDA 503
V+ + + +S+ ++DMY KCG + A + F I D T WN+++ HG
Sbjct: 334 QVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDEIGDPTEIA--WNSLVSVFGQHGLG 391
Query: 504 NLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGC 563
+KI+ + R +K N+ITFI +L+ C HAGLV+ G YF SM Y V P +HY C
Sbjct: 392 KDAIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSC 451
Query: 564 MVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSH 623
++DLLGRAG+L++A+E I MP + + W + L A RIHG+ E+G+ AA+ L L+P +
Sbjct: 452 VIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGACRIHGDKEMGKLAAEKLVKLEPKN 511
Query: 624 GPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
+ VLLSNIYA+ +WED S+R MRD +K+LPG+S V
Sbjct: 512 SGALVLLSNIYANERQWEDVRSVRMRMRDGNVKKLPGYSWV 552
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 119/487 (24%), Positives = 216/487 (44%), Gaps = 100/487 (20%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
+ A SA+R C++ ++ G+Q+H L K G+ S F+ ++L ++Y+KCG +MFD
Sbjct: 106 QFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCG------AMFD 159
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+C +VF++ P K VS+T+MI G+++ + EAL
Sbjct: 160 AC-------------------------KVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLA 194
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
F+ M V ++ L S + + L R +H V+KL + + + L +MY
Sbjct: 195 FKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSK 254
Query: 203 CSSLVEARSLFDEMKE-RNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDG 261
+ A ++F E RN+VS+ +IDG
Sbjct: 255 AGDMESASNVFGIDSECRNVVSYTC-------------------------------LIDG 283
Query: 262 YLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCY 321
Y++ E++ + L+++ + GI PN+ LI AC A +G Q+H+ ++K FD
Sbjct: 284 YVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDED 343
Query: 322 DFIQATIIHFYAACGRINLARLQF-ELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ 380
F+ + ++ Y CG + A F E+G IA WN+L++ F ++G+ +D
Sbjct: 344 PFVSSILVDMYGKCGLLEQAIQAFDEIGDPTEIA-WNSLVSVFGQHGLGKD--------- 393
Query: 381 KRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRW 440
A+++F MVD GVKPN IT +S+ + +G ++EG
Sbjct: 394 ----------------------AIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEG-L 430
Query: 441 AHEYVLNNS--ITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLA 498
+ Y ++ + + + + +ID+ + G + A E + + W + +
Sbjct: 431 DYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFG-WCSFLGACR 489
Query: 499 MHGDANL 505
+HGD +
Sbjct: 490 IHGDKEM 496
>gi|242041125|ref|XP_002467957.1| hypothetical protein SORBIDRAFT_01g037150 [Sorghum bicolor]
gi|241921811|gb|EER94955.1| hypothetical protein SORBIDRAFT_01g037150 [Sorghum bicolor]
Length = 650
Score = 344 bits (883), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 190/532 (35%), Positives = 290/532 (54%), Gaps = 36/532 (6%)
Query: 153 PNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSL 212
P+ T + ++ G E R +H +K + + L++MY C + AR +
Sbjct: 104 PDTYTHPLLAAACAARGDAREGRQVHSHAVKHGFGDNLYLRNALMHMYSACGCVAGARRV 163
Query: 213 FDEMKERNIVSWNVMLNG-------------------------------FAKAGLVELAR 241
FD + VSWN +L FA+ G+VE AR
Sbjct: 164 FDAGPVWDAVSWNTILATYVRDGDVEQAVGVFARMPERSAAAVSSMVALFARTGMVEEAR 223
Query: 242 ELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAM 301
+F+ +D +W MI + + + EAL ++ M +G ++ ++V +++AC ++
Sbjct: 224 GVFDGAEHRDAFTWTAMISCFERNDLFVEALAVFSDMREEGWPVDEAVMVSVVAACAKSE 283
Query: 302 AFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIK-DHIASWNALI 360
G H ++V+AG +Q +IH Y++C + AR F+ DH SWN++I
Sbjct: 284 VIQNGEVCHGLVVRAGLGSRVNVQNALIHMYSSCLDVVAARRLFDSSESLDHF-SWNSMI 342
Query: 361 AGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEI 420
+G+++NG +EDA+ LFN M +D SWSAMI+G QN Q + AL +F M +KP+E+
Sbjct: 343 SGYLKNGRVEDAKALFNVMPDKDNVSWSAMIAGCVQNNQSSEALTVFDNMRAHEIKPDEV 402
Query: 421 TMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHI 480
T+VSV A + L++G+ HEY+ + L ++IDMY KCG + A EVF +
Sbjct: 403 TLVSVISACTNLCALEQGKLVHEYIRQYQYNITIVLGTSLIDMYMKCGCMEAALEVFDMV 462
Query: 481 RDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNS-ITFIGVLSTCCHAGLVD 539
++ T WNA+I GLAM+G +L ++S++E I + S ITF GVLS C H GLV+
Sbjct: 463 EEKGTPC--WNAVIVGLAMNGLVTRSLDMFSEMETSGIAVPSEITFTGVLSACRHGGLVE 520
Query: 540 LGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAA 599
G ++FK M++ Y + P+++HYGCMVDLLGRAG + +AE++I+SMPM DV WG LL A
Sbjct: 521 EGRQFFKLMQNKYQIIPNIRHYGCMVDLLGRAGYVREAEDLIQSMPMSPDVPAWGALLGA 580
Query: 600 SRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMR 651
H + EVGER K L L P H + +LSNIYA G W+ +R M+
Sbjct: 581 CWKHSDSEVGERVGKKLVKLDPHHDGFQTMLSNIYASEGMWQCVKDLRGSMK 632
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 140/507 (27%), Positives = 237/507 (46%), Gaps = 63/507 (12%)
Query: 41 QGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYI 100
+G+Q+HS K G N +++N+L+++Y+ CG ++ A+ +FD+ D V+ N +++ Y+
Sbjct: 124 EGRQVHSHAVKHGFGDNLYLRNALMHMYSACGCVAGARRVFDAGPVWDAVSWNTILATYV 183
Query: 101 RNDRLN-------------------------------DAREVFDKTPIKCCVSYTSMIMG 129
R+ + +AR VFD + ++T+MI
Sbjct: 184 RDGDVEQAVGVFARMPERSAAAVSSMVALFARTGMVEEARGVFDGAEHRDAFTWTAMISC 243
Query: 130 FAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGF 189
F +ND + EAL VF DMR G +E + SV+++ I + HGLV++ +
Sbjct: 244 FERNDLFVEALAVFSDMREEGWPVDEAVMVSVVAACAKSEVIQNGEVCHGLVVRAGLGSR 303
Query: 190 VIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPS 249
V + L++MY C +V AR LFD + + SWN M++G+ K G VE A+ LF +P
Sbjct: 304 VNVQNALIHMYSSCLDVVAARRLFDSSESLDHFSWNSMISGYLKNGRVEDAKALFNVMPD 363
Query: 250 KDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQI 309
KD VSW MI G +Q + SEALT++ M I P++V +V +ISAC A +G +
Sbjct: 364 KDNVSWSAMIAGCVQNNQSSEALTVFDNMRAHEIKPDEVTLVSVISACTNLCALEQGKLV 423
Query: 310 HSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMI 369
H I + ++ + ++I Y CG + A F++ + WNA+I G NG++
Sbjct: 424 HEYIRQYQYNITIVLGTSLIDMYMKCGCMEAALEVFDMVEEKGTPCWNAVIVGLAMNGLV 483
Query: 370 EDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAI 429
+ +F+ M+ SG A P+EIT V A
Sbjct: 484 TRSLDMFSEMET----------SGIA--------------------VPSEITFTGVLSAC 513
Query: 430 ASSGTLKEGRWAHEYVLNN-SITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVS 488
G ++EGR + + N I N ++D+ + G + A ++ + + V
Sbjct: 514 RHGGLVEEGRQFFKLMQNKYQIIPNIRHYGCMVDLLGRAGYVREAEDLIQSM-PMSPDVP 572
Query: 489 PWNAIICGLAMHGDANLTLKIYSDLEK 515
W A++ H D+ + ++ L K
Sbjct: 573 AWGALLGACWKHSDSEVGERVGKKLVK 599
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 101/371 (27%), Positives = 176/371 (47%), Gaps = 63/371 (16%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E +VS + C+ + G+ H L+ ++GL S +QN+LI++Y+ C + A+ +FD
Sbjct: 269 EAVMVSVVAACAKSEVIQNGEVCHGLVVRAGLGSRVNVQNALIHMYSSCLDVVAARRLFD 328
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
S +LD + N MISGY++N R+ DA+ +F+ P K VS+++MI G QN+ EAL V
Sbjct: 329 SSESLDHFSWNSMISGYLKNGRVEDAKALFNVMPDKDNVSWSAMIAGCVQNNQSSEALTV 388
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
F +MR + P+EVTL SVIS+ +L + + +++H + + + +++ T+L++MY
Sbjct: 389 FDNMRAHEIKPDEVTLVSVISACTNLCALEQGKLVHEYIRQYQYNITIVLGTSLIDMYMK 448
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
C + A +FD ++E+ WN ++ G A GLV
Sbjct: 449 CGCMEAALEVFDMVEEKGTPCWNAVIVGLAMNGLV------------------------- 483
Query: 263 LQVERLSEALTMYRAMLCDGIA-PNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCY 321
+ +L M+ M GIA P+++ ++SAC EG Q +
Sbjct: 484 ------TRSLDMFSEMETSGIAVPSEITFTGVLSACRHGGLVEEGRQFFKL--------- 528
Query: 322 DFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ- 380
+Q + I +I + ++ R G + +A L +M
Sbjct: 529 ---------------------MQNKYQIIPNIRHYGCMVDLLGRAGYVREAEDLIQSMPM 567
Query: 381 KRDVYSWSAMI 391
DV +W A++
Sbjct: 568 SPDVPAWGALL 578
Score = 47.0 bits (110), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 63/144 (43%), Gaps = 5/144 (3%)
Query: 374 QLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSG 433
QLF ++ + ++ + +I + P++ L+ M A P+ T + A A+ G
Sbjct: 64 QLFRLVRSPNAFTCNTLIRAALRQGLPHLCFPLYASMPAA---PDTYTHPLLAAACAARG 120
Query: 434 TLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAI 493
+EGR H + + + N L A++ MY+ CG + A VF WN I
Sbjct: 121 DAREGRQVHSHAVKHGFGDNLYLRNALMHMYSACGCVAGARRVF--DAGPVWDAVSWNTI 178
Query: 494 ICGLAMHGDANLTLKIYSDLEKRN 517
+ GD + +++ + +R+
Sbjct: 179 LATYVRDGDVEQAVGVFARMPERS 202
>gi|297807711|ref|XP_002871739.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317576|gb|EFH47998.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 850
Score = 344 bits (883), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 213/650 (32%), Positives = 324/650 (49%), Gaps = 77/650 (11%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
+ C +V G H+L +G SN F+ N+L+ +Y++CG
Sbjct: 134 FKACGEISSVRCGDSSHALSRVTGFMSNVFVGNALVAMYSRCG----------------- 176
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDM-RI 148
L+DAR+VFD+ P+ VS+ S+I +A+ + ALE+F M
Sbjct: 177 --------------SLSDARKVFDEMPVWDVVSWNSIIESYAKLGKPKMALEMFSKMTNE 222
Query: 149 LGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVE 208
G P+++TL +V+ +G + HG + + + + L++MY + E
Sbjct: 223 FGFRPDDITLVNVLPPCASVGTRSLGKQFHGFAVTSEMIQNMFVGNCLVDMYAKFGMMDE 282
Query: 209 ARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSK----DVVSWGTMIDGYLQ 264
A ++F M +++VSWN M+ G+++ G E A LFE++ + DVV+W I GY Q
Sbjct: 283 ANTVFSNMPVKDVVSWNAMVAGYSQIGRFEDAVRLFEQMQEEKIKMDVVTWSAAISGYAQ 342
Query: 265 VERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCY--- 321
EAL + R ML GI PN+V ++ ++S C A G +IH +K D
Sbjct: 343 RGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPMDLRKNG 402
Query: 322 ----DFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFN 377
+ + +I YA C ++++AR F D ++
Sbjct: 403 HGDENMVINQLIDMYAKCKKVDIARAMF-----DSLSP---------------------- 435
Query: 378 NMQKRDVYSWSAMISGYAQNEQPNMALELFHGMV--DAGVKPNEITMVSVFCAIASSGTL 435
++RDV +W+ MI GY+Q+ N ALEL M D +PN T+ A AS L
Sbjct: 436 --KERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAAL 493
Query: 436 KEGRWAHEYVLNNSI-TLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAII 494
G+ H Y L N + +S +IDMYAKCG I A VF ++ ++ W +++
Sbjct: 494 SIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGDIGDARLVFDNMMEKNEVT--WTSLM 551
Query: 495 CGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNV 554
G MHG L I+ ++ + KL+ +T + VL C H+G++D G YF MK+ + V
Sbjct: 552 TGYGMHGYGEEALGIFEEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTDFGV 611
Query: 555 EPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAK 614
P +HY C+VDLLGRAG+L A +I MPM+ V+W LL+ RIHG VE+GE AAK
Sbjct: 612 SPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVALLSCCRIHGKVELGEYAAK 671
Query: 615 SLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
+ L ++ S LLSN+YA+AGRW+D IR MR G+K+ PG S V
Sbjct: 672 KITELASNNDGSYTLLSNMYANAGRWKDVTRIRSLMRHKGIKKRPGCSWV 721
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 126/498 (25%), Positives = 222/498 (44%), Gaps = 76/498 (15%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
++ LV+ L C++ S G+Q H S + N F+ N L+++YAK G++ +A ++F
Sbjct: 229 DITLVNVLPPCASVGTRSLGKQFHGFAVTSEMIQNMFVGNCLVDMYAKFGMMDEANTVFS 288
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDK---TPIKC-CVSYTSMIMGFAQNDCWRE 138
+ D V+ N M++GY + R DA +F++ IK V++++ I G+AQ E
Sbjct: 289 NMPVKDVVSWNAMVAGYSQIGRFEDAVRLFEQMQEEKIKMDVVTWSAAISGYAQRGLGYE 348
Query: 139 ALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMID-------GFVI 191
AL V R M G+ PNEVTL SV+S +G + + +H IK +D +
Sbjct: 349 ALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPMDLRKNGHGDENM 408
Query: 192 ISTNLLNMYCVCSSLVEARSLFDEM--KERNIVSWNVMLNGFAKAGLVELARELFERIPS 249
+ L++MY C + AR++FD + KER++V+W VM+ G+++ G A EL +
Sbjct: 409 VINQLIDMYAKCKKVDIARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFE 468
Query: 250 KDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQI 309
+D + PN I + AC A G QI
Sbjct: 469 EDCQT-----------------------------RPNAFTISCALVACASLAALSIGKQI 499
Query: 310 HSIIVKAGFDCYD-FIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGM 368
H+ ++ + F+ +I YA CG I ARL F+ ++ + +W +L+ G+ +G
Sbjct: 500 HAYALRNQQNAVPLFVSNCLIDMYAKCGDIGDARLVFDNMMEKNEVTWTSLMTGYGMHGY 559
Query: 369 IEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCA 428
E+A +F M++ G K + +T++ V A
Sbjct: 560 GEEALGIFEEMRR-------------------------------IGFKLDGVTLLVVLYA 588
Query: 429 IASSGTLKEG-RWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSV 487
+ SG + +G + + + ++ A ++D+ + G +N A + + V
Sbjct: 589 CSHSGMIDQGMEYFNRMKTDFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPV 648
Query: 488 SPWNAIICGLAMHGDANL 505
W A++ +HG L
Sbjct: 649 V-WVALLSCCRIHGKVEL 665
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 80/342 (23%), Positives = 154/342 (45%), Gaps = 41/342 (11%)
Query: 203 CSSLVEARSLFDEMKERNIVSWNV---MLNGFAKAGLVELARELFERIPSKD--VVSWGT 257
C ++ + + + ++ I++ N+ +++ + G + A L R P D V W +
Sbjct: 38 CKTISQVKLIHQKLLSFGILTLNLTSHLISTYISLGCLSHAVSLLRRFPPSDAGVYHWNS 97
Query: 258 MIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAG 317
+I Y R ++ L+ + M P++ + ACG + G H++ G
Sbjct: 98 LIRSYGNNGRANKCLSSFCLMHSLSWTPDNYTFPFVFKACGEISSVRCGDSSHALSRVTG 157
Query: 318 FDCYDFIQATIIHFYAACGRINLARLQF-ELGIKDHIASWNALIAGFIRNGMIEDARQLF 376
F F+ ++ Y+ CG ++ AR F E+ + D + SWN++
Sbjct: 158 FMSNVFVGNALVAMYSRCGSLSDARKVFDEMPVWD-VVSWNSI----------------- 199
Query: 377 NNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDA-GVKPNEITMVSVFCAIASSGTL 435
I YA+ +P MALE+F M + G +P++IT+V+V AS GT
Sbjct: 200 --------------IESYAKLGKPKMALEMFSKMTNEFGFRPDDITLVNVLPPCASVGTR 245
Query: 436 KEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIIC 495
G+ H + + + + N + ++DMYAK G ++ A VF ++ V WNA++
Sbjct: 246 SLGKQFHGFAVTSEMIQNMFVGNCLVDMYAKFGMMDEANTVFSNM--PVKDVVSWNAMVA 303
Query: 496 GLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGL 537
G + G ++++ +++ IK++ +T+ +S GL
Sbjct: 304 GYSQIGRFEDAVRLFEQMQEEKIKMDVVTWSAAISGYAQRGL 345
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 135/307 (43%), Gaps = 18/307 (5%)
Query: 359 LIAGFIRNGMIEDARQLFNNMQKRD--VYSWSAMISGYAQNEQPNMALELFHGMVDAGVK 416
LI+ +I G + A L D VY W+++I Y N + N L F M
Sbjct: 65 LISTYISLGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGNNGRANKCLSSFCLMHSLSWT 124
Query: 417 PNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEV 476
P+ T VF A +++ G +H N + A++ MY++CGS++ A +V
Sbjct: 125 PDNYTFPFVFKACGEISSVRCGDSSHALSRVTGFMSNVFVGNALVAMYSRCGSLSDARKV 184
Query: 477 FYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKR-NIKLNSITFIGVLSTCCHA 535
F + V WN+II A G + L+++S + + + IT + VL C
Sbjct: 185 FDEM--PVWDVVSWNSIIESYAKLGKPKMALEMFSKMTNEFGFRPDDITLVNVLPPCASV 242
Query: 536 GLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGT 595
G LG++ F + ++ C+VD+ + G +++A V +MP+K DVV W
Sbjct: 243 GTRSLGKQ-FHGFAVTSEMIQNMFVGNCLVDMYAKFGMMDEANTVFSNMPVK-DVVSWNA 300
Query: 596 LLAASRIHGNVEVG--ERAAKSLAGLQPSHGPSRVLLSNI----YADAGRWEDAFSIRKE 649
++A G ++G E A + +Q V+ + YA G +A + ++
Sbjct: 301 MVA-----GYSQIGRFEDAVRLFEQMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQ 355
Query: 650 MRDCGMK 656
M G+K
Sbjct: 356 MLSSGIK 362
Score = 45.8 bits (107), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 72/166 (43%), Gaps = 3/166 (1%)
Query: 434 TLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAI 493
T+ + + H+ +L+ I L NL++ +I Y G ++ A + V WN++
Sbjct: 40 TISQVKLIHQKLLSFGI-LTLNLTSHLISTYISLGCLSHAVSLLRRFPPSDAGVYHWNSL 98
Query: 494 ICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYN 553
I +G AN L + + + ++ TF V C V G+ ++ V
Sbjct: 99 IRSYGNNGRANKCLSSFCLMHSLSWTPDNYTFPFVFKACGEISSVRCGDSS-HALSRVTG 157
Query: 554 VEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAA 599
++ +V + R G L DA +V MP+ DVV W +++ +
Sbjct: 158 FMSNVFVGNALVAMYSRCGSLSDARKVFDEMPV-WDVVSWNSIIES 202
>gi|449488311|ref|XP_004157997.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Cucumis sativus]
Length = 785
Score = 344 bits (882), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 213/640 (33%), Positives = 327/640 (51%), Gaps = 56/640 (8%)
Query: 31 RYCSAHIAVS--QGQQIHSLIFKSGLESNTFI-QNSLINLYAKCGLISQAKSMFDSCSTL 87
RYC + S G L+ SN I +NSLI Y++ G I +A+ +FD
Sbjct: 68 RYCFSQPGYSMFSGLMFFRLVLNRFYCSNFIISRNSLITRYSRLGQIEKARVVFDEMRDK 127
Query: 88 DPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMR 147
+ ++ N +++GY +N R +A+ +FDK + +S+ ++ G+ N EA EVF M
Sbjct: 128 NIISWNSIVAGYFQNKRPQEAQNMFDKMSERNTISWNGLVSGYINNGMINEAREVFDRMP 187
Query: 148 ILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLV 207
V+ W M+ G V + MI
Sbjct: 188 ERNVVS------------------WTA-MVRGYVKEGMIS-------------------- 208
Query: 208 EARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVER 267
EA +LF +M E+N+VSW VML G + G ++ A LF+ +P KDVV+ MI GY QV R
Sbjct: 209 EAETLFWQMPEKNVVSWTVMLGGLLQEGRIDEACRLFDMMPEKDVVTRTNMIGGYCQVGR 268
Query: 268 LSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQAT 327
L EA ++ M + MI + + + I + + + +
Sbjct: 269 LVEARMLFDEMPRRNVVSWTTMITGYVQ--------NQQVDIARKLFEVMPEKNEVSWTA 320
Query: 328 IIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSW 387
++ Y CGR++ A F + + NA+I F +NG + ARQ+F+ M+++D +W
Sbjct: 321 MLKGYTNCGRLDEASELFNAMPIKSVVACNAMILCFGQNGEVPKARQVFDQMREKDEGTW 380
Query: 388 SAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLN 447
SAMI Y + ALELF M G++PN +++SV A L GR H ++
Sbjct: 381 SAMIKVYERKGLELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVR 440
Query: 448 NSITLNDNLSAAIIDMYAKCGSINTAFEVF--YHIRDRTTSVSPWNAIICGLAMHGDANL 505
+ L+ +++ ++ MY KCG++ A +VF + ++D V WN+II G A HG
Sbjct: 441 SQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKD----VVMWNSIITGYAQHGLGVE 496
Query: 506 TLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMV 565
L+++ D+ I + +TF+GVLS C + G V G F SM++ Y VE ++HY CMV
Sbjct: 497 ALRVFHDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYACMV 556
Query: 566 DLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGP 625
DLLGRAG+L +A ++I MPM+AD +IWG LL A R H +++ E AAK L L+P +
Sbjct: 557 DLLGRAGKLNEAMDLIEKMPMEADAIIWGALLGACRTHMKLDLAEVAAKKLLVLEPKNAG 616
Query: 626 SRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGVV 665
+LLSNIYA GRW+D +R+ MRD + + PG S +V
Sbjct: 617 PFILLSNIYASQGRWDDVAELRRNMRDRRVSKYPGCSWIV 656
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 105/236 (44%), Gaps = 62/236 (26%)
Query: 25 ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSC 84
+L+S L C+ + G++IH+ + +S + + ++ + L+++Y KCG +++AK +FD
Sbjct: 414 SLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRF 473
Query: 85 STLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFR 144
+ D V N S+I G+AQ+ EAL VF
Sbjct: 474 AVKDVVMWN-------------------------------SIITGYAQHGLGVEALRVFH 502
Query: 145 DMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCS 204
DM G++P++VT V+S+ + G +K ++ F + T Y V
Sbjct: 503 DMHFSGIMPDDVTFVGVLSACSYTGN-----------VKKGLEIFNSMETK----YQV-- 545
Query: 205 SLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSK-DVVSWGTMI 259
E+ I + M++ +AG + A +L E++P + D + WG ++
Sbjct: 546 -------------EQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIWGALL 588
>gi|449453226|ref|XP_004144359.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Cucumis sativus]
Length = 785
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 213/640 (33%), Positives = 327/640 (51%), Gaps = 56/640 (8%)
Query: 31 RYCSAHIAVS--QGQQIHSLIFKSGLESNTFI-QNSLINLYAKCGLISQAKSMFDSCSTL 87
RYC + S G L+ SN I +NSLI Y++ G I +A+ +FD
Sbjct: 68 RYCFSQPGYSMFSGLMFFRLVLNRFYCSNFIISRNSLITRYSRLGQIEKARVVFDEMRDK 127
Query: 88 DPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMR 147
+ ++ N +++GY +N R +A+ +FDK + +S+ ++ G+ N EA EVF M
Sbjct: 128 NIISWNSIVAGYFQNKRPQEAQNMFDKMSERNTISWNGLVSGYINNGMINEAREVFDRMP 187
Query: 148 ILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLV 207
V+ W M+ G V + MI
Sbjct: 188 ERNVVS------------------WTA-MVRGYVKEGMIS-------------------- 208
Query: 208 EARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVER 267
EA +LF +M E+N+VSW VML G + G ++ A LF+ +P KDVV+ MI GY QV R
Sbjct: 209 EAETLFWQMPEKNVVSWTVMLGGLLQEGRIDEACRLFDMMPEKDVVTRTNMIGGYCQVGR 268
Query: 268 LSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQAT 327
L EA ++ M + MI + + + I + + + +
Sbjct: 269 LVEARMLFDEMPRRNVVSWTTMITGYVQ--------NQQVDIARKLFEVMPEKNEVSWTA 320
Query: 328 IIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSW 387
++ Y CGR++ A F + + NA+I F +NG + ARQ+F+ M+++D +W
Sbjct: 321 MLKGYTNCGRLDEASELFNAMPIKSVVACNAMILCFGQNGEVPKARQVFDQMREKDEGTW 380
Query: 388 SAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLN 447
SAMI Y + ALELF M G++PN +++SV A L GR H ++
Sbjct: 381 SAMIKVYERKGLELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVR 440
Query: 448 NSITLNDNLSAAIIDMYAKCGSINTAFEVF--YHIRDRTTSVSPWNAIICGLAMHGDANL 505
+ L+ +++ ++ MY KCG++ A +VF + ++D V WN+II G A HG
Sbjct: 441 SQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKD----VVMWNSIITGYAQHGLGVE 496
Query: 506 TLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMV 565
L+++ D+ I + +TF+GVLS C + G V G F SM++ Y VE ++HY CMV
Sbjct: 497 ALRVFHDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYACMV 556
Query: 566 DLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGP 625
DLLGRAG+L +A ++I MPM+AD +IWG LL A R H +++ E AAK L L+P +
Sbjct: 557 DLLGRAGKLNEAMDLIEKMPMEADAIIWGALLGACRTHMKLDLAEVAAKKLLVLEPKNAG 616
Query: 626 SRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGVV 665
+LLSNIYA GRW+D +R+ MRD + + PG S +V
Sbjct: 617 PFILLSNIYASQGRWDDVAELRRNMRDRRVSKYPGCSWIV 656
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 105/236 (44%), Gaps = 62/236 (26%)
Query: 25 ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSC 84
+L+S L C+ + G++IH+ + +S + + ++ + L+++Y KCG +++AK +FD
Sbjct: 414 SLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRF 473
Query: 85 STLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFR 144
+ D V N S+I G+AQ+ EAL VF
Sbjct: 474 AVKDVVMWN-------------------------------SIITGYAQHGLGVEALRVFH 502
Query: 145 DMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCS 204
DM G++P++VT V+S+ + G +K ++ F + T Y V
Sbjct: 503 DMHFSGIMPDDVTFVGVLSACSYTGN-----------VKKGLEIFNSMETK----YQV-- 545
Query: 205 SLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSK-DVVSWGTMI 259
E+ I + M++ +AG + A +L E++P + D + WG ++
Sbjct: 546 -------------EQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIWGALL 588
>gi|242050128|ref|XP_002462808.1| hypothetical protein SORBIDRAFT_02g032350 [Sorghum bicolor]
gi|241926185|gb|EER99329.1| hypothetical protein SORBIDRAFT_02g032350 [Sorghum bicolor]
Length = 638
Score = 343 bits (881), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 190/560 (33%), Positives = 304/560 (54%), Gaps = 33/560 (5%)
Query: 105 LNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISS 164
L AR +FD P V Y ++I + + C REAL + R M G++PNE TL V+ +
Sbjct: 62 LCHARRLFDGIPGPDRVMYNTIIRAYCNSSCPREALRLHRGMLRRGILPNEFTLPFVVKA 121
Query: 165 SVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSW 224
+HG+ ++L + G V +
Sbjct: 122 CTIAQAREHALAVHGVALRLGLVGQVFVG------------------------------- 150
Query: 225 NVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIA 284
N +L+ +A AG + +R F+ + ++VVSW +MI GY Q E +++ M G
Sbjct: 151 NALLHSYASAGSLGDSRRFFDEMVDRNVVSWNSMIGGYAQAGDTREVCSLFGEMRRQGFL 210
Query: 285 PNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQ 344
++ +V L+ AC + G +H ++ +G +++ ++ Y CG + +AR
Sbjct: 211 EDEFTLVSLLIACSQEGNLEIGRLVHCRMLVSGSRVDLILESALVDMYGKCGDLWMARRC 270
Query: 345 FELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMAL 404
FE+ + SW +++ ++G + AR F++M +R++ SW+AMIS Y Q Q + AL
Sbjct: 271 FEMMPIKSVVSWTSMLCAQTKHGSVNAARCWFDHMPERNIVSWNAMISCYVQRGQCHEAL 330
Query: 405 ELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMY 464
+L++ M G+ P+EIT+V+V A G L G+ H Y+ +N + +L +++DMY
Sbjct: 331 DLYNQMQSQGLAPDEITLVAVLSASGRIGDLTVGKMVHLYIRDNIYNPDVSLVNSLLDMY 390
Query: 465 AKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSIT 524
AKCG ++TA +F + +R +V WN II GLAMHG A T+ + + + + IT
Sbjct: 391 AKCGQVDTAISLFSEMCNR--NVVSWNVIIGGLAMHGRALDTITFFRSMVTDSFAPDGIT 448
Query: 525 FIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSM 584
F+ +LS C H GL++ G+ YF+SM+ VYNV+ +++HY CMVDLLGR G LE A +I+ M
Sbjct: 449 FVALLSACSHGGLLETGQHYFESMRHVYNVKHEVEHYACMVDLLGRRGHLEKAVCLIKEM 508
Query: 585 PMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAF 644
PMK DVV+WG LL A RIHGNV++G + K L L+ G VL+SN+ + +WED
Sbjct: 509 PMKPDVVVWGALLGACRIHGNVKIGRQVIKQLLELEGISGGLFVLISNLLYETHQWEDMK 568
Query: 645 SIRKEMRDCGMKRLPGFSGV 664
+RK M++ G ++ G S +
Sbjct: 569 RLRKLMKEWGTRKDMGVSSI 588
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 123/497 (24%), Positives = 212/497 (42%), Gaps = 74/497 (14%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E L ++ C+ A +H + + GL F+ N+L++ YA G
Sbjct: 112 EFTLPFVVKACTIAQAREHALAVHGVALRLGLVGQVFVGNALLHSYASAG---------- 161
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
L D+R FD+ + VS+ SMI G+AQ RE +
Sbjct: 162 ---------------------SLGDSRRFFDEMVDRNVVSWNSMIGGYAQAGDTREVCSL 200
Query: 143 FRDMRILGVIPNEVTLASVI-----SSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLL 197
F +MR G + +E TL S++ ++ +G + CRML V +D +I+ + L+
Sbjct: 201 FGEMRRQGFLEDEFTLVSLLIACSQEGNLEIGRLVHCRML---VSGSRVD--LILESALV 255
Query: 198 NMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGT 257
+MY C L AR F+ M +++VSW ML K G V AR F+ +P +++VSW
Sbjct: 256 DMYGKCGDLWMARRCFEMMPIKSVVSWTSMLCAQTKHGSVNAARCWFDHMPERNIVSWNA 315
Query: 258 MIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAG 317
MI Y+Q + EAL +Y M G+AP+++ +V ++SA GR G +H I
Sbjct: 316 MISCYVQRGQCHEALDLYNQMQSQGLAPDEITLVAVLSASGRIGDLTVGKMVHLYIRDNI 375
Query: 318 FDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFN 377
++ + +++ YA CG+++ A F ++ SWN +I G +G D
Sbjct: 376 YNPDVSLVNSLLDMYAKCGQVDTAISLFSEMCNRNVVSWNVIIGGLAMHGRALD------ 429
Query: 378 NMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKE 437
+ F MV P+ IT V++ A + G L+
Sbjct: 430 -------------------------TITFFRSMVTDSFAPDGITFVALLSACSHGGLLET 464
Query: 438 GRWAHEYVLN-NSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICG 496
G+ E + + ++ A ++D+ + G + A + + V W A++
Sbjct: 465 GQHYFESMRHVYNVKHEVEHYACMVDLLGRRGHLEKAVCLIKEM-PMKPDVVVWGALLGA 523
Query: 497 LAMHGDANLTLKIYSDL 513
+HG+ + ++ L
Sbjct: 524 CRIHGNVKIGRQVIKQL 540
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 103/408 (25%), Positives = 181/408 (44%), Gaps = 70/408 (17%)
Query: 231 FAKAGLVEL--ARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDV 288
AKAG L AR LF+ IP D V + T+I Y EAL ++R ML GI PN+
Sbjct: 54 LAKAGHGVLCHARRLFDGIPGPDRVMYNTIIRAYCNSSCPREALRLHRGMLRRGILPNEF 113
Query: 289 MIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELG 348
+ ++ AC A A L +H + ++ G F+ ++H YA+ G + +R F+
Sbjct: 114 TLPFVVKACTIAQAREHALAVHGVALRLGLVGQVFVGNALLHSYASAGSLGDSRRFFDEM 173
Query: 349 IKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFH 408
+ ++ SWN++I G+ + G + LF M+++
Sbjct: 174 VDRNVVSWNSMIGGYAQAGDTREVCSLFGEMRRQ-------------------------- 207
Query: 409 GMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKC- 467
G +E T+VS+ A + G L+ GR H +L + ++ L +A++DMY KC
Sbjct: 208 -----GFLEDEFTLVSLLIACSQEGNLEIGRLVHCRMLVSGSRVDLILESALVDMYGKCG 262
Query: 468 ------------------------------GSINTAFEVFYHIRDRTTSVSPWNAIICGL 497
GS+N A F H+ +R ++ WNA+I
Sbjct: 263 DLWMARRCFEMMPIKSVVSWTSMLCAQTKHGSVNAARCWFDHMPER--NIVSWNAMISCY 320
Query: 498 AMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMK-SVYNVEP 556
G + L +Y+ ++ + + + IT + VLS G + +G+ ++ ++YN P
Sbjct: 321 VQRGQCHEALDLYNQMQSQGLAPDEITLVAVLSASGRIGDLTVGKMVHLYIRDNIYN--P 378
Query: 557 DLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHG 604
D+ ++D+ + GQ++ A + M + +VV W ++ +HG
Sbjct: 379 DVSLVNSLLDMYAKCGQVDTAISLFSEMCNR-NVVSWNVIIGGLAMHG 425
>gi|449461160|ref|XP_004148310.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g18840-like [Cucumis
sativus]
Length = 1096
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 192/603 (31%), Positives = 336/603 (55%), Gaps = 9/603 (1%)
Query: 51 KSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDARE 110
KSG F+ N LI YAK GL++ A+ +FD + + N +I+ Y+++ L AR
Sbjct: 439 KSGFTPTIFMSNQLITFYAKHGLLNDAQKLFDEMPERNVFSWNAIIAAYVKSHNLRQARA 498
Query: 111 VFDKTPIKCCVSYTSMIMGFAQNDCWR-EALEVFRDMRILG--VIPNEVTLASVISSSVH 167
+FD K V+Y SM+ G+A++D ++ +AL F +M+ + +E TL ++++ +
Sbjct: 499 LFDSAVCKDLVTYNSMLSGYARSDGYQGQALGFFMEMQTAPDMIRIDEFTLITMLNLTAK 558
Query: 168 LGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA-RSLFDEMKERNIVSWNV 226
L I + LH ++K D V +++L++MY C EA R + + + VS N
Sbjct: 559 LCVISYGKQLHSFMLKTANDLTVFAASSLIDMYSKCGFFKEACRVYYGCGEVVDSVSRNA 618
Query: 227 MLNGFAKAGLVELARELF-ERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAP 285
M+ + G +++A +LF + + DVV+W TMI G++Q E+L ++ M + +
Sbjct: 619 MVAACCREGEIDVALDLFWKELEQNDVVAWNTMISGFVQNGYEEESLKLFVRMADEKVGW 678
Query: 286 NDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLAR-LQ 344
N+ ++SAC + G ++H+ ++K FI + ++ Y C + A+ +
Sbjct: 679 NEHTFASVLSACSNLRSLKLGKEVHAYVLKNRLIANPFICSGLVDVYCKCNNMRYAKSVN 738
Query: 345 FELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMAL 404
EL +++ + S ++I G+ G + +AR+LF+++ +++ W+A+ GY + +Q
Sbjct: 739 SELRMQN-VYSITSMIVGYSSQGNMAEARKLFDSLDEKNSAVWTALFFGYVKLQQCEAVF 797
Query: 405 ELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMY 464
EL P+ + ++S+ A A L G+ H Y+L I L+ L+++++DMY
Sbjct: 798 ELLSEYRKEAKVPDVLILISIIGACAIQAALVPGKQIHSYMLRAGIKLDTKLTSSLVDMY 857
Query: 465 AKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSIT 524
+KCGSI A +F + D+ + + +N +I G A HG N ++++ ++ K K ++IT
Sbjct: 858 SKCGSIIYAERIFREVTDKDSII--YNIMIAGYAHHGWENEAVQLFKEMVKHGFKPDAIT 915
Query: 525 FIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSM 584
F+ +LS C H GLV+LGE +F SM + YN+ P++ HY CM+DL GRA QL+ A E +R +
Sbjct: 916 FVALLSACRHGGLVELGEHFFDSMSNDYNICPEIDHYACMIDLYGRANQLDKALEFMRKI 975
Query: 585 PMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAF 644
P++ D VIWG L A RI+GN E+ +A L ++ +G V L+N+YA G WE+
Sbjct: 976 PIQLDAVIWGAFLNACRINGNAELARKAEDELLVIEGENGSRYVQLANVYAAEGNWEEMG 1035
Query: 645 SIR 647
IR
Sbjct: 1036 RIR 1038
Score = 181 bits (460), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 138/498 (27%), Positives = 247/498 (49%), Gaps = 43/498 (8%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E L++ L + +S G+Q+HS + K+ + F +SLI++Y+KCG +A ++
Sbjct: 546 EFTLITMLNLTAKLCVISYGKQLHSFMLKTANDLTVFAASSLIDMYSKCGFFKEACRVYY 605
Query: 83 SC-STLDPVACNIMISGYIRNDRLNDAREVFDKT-PIKCCVSYTSMIMGFAQNDCWREAL 140
C +D V+ N M++ R ++ A ++F K V++ +MI GF QN E+L
Sbjct: 606 GCGEVVDSVSRNAMVAACCREGEIDVALDLFWKELEQNDVVAWNTMISGFVQNGYEEESL 665
Query: 141 EVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMY 200
++F M V NE T ASV+S+ +L + + +H V+K + I + L+++Y
Sbjct: 666 KLFVRMADEKVGWNEHTFASVLSACSNLRSLKLGKEVHAYVLKNRLIANPFICSGLVDVY 725
Query: 201 CVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMID 260
C C+++ A+S+ E++ +N+ S M+ G++ G + AR+LF+ + K+ W +
Sbjct: 726 CKCNNMRYAKSVNSELRMQNVYSITSMIVGYSSQGNMAEARKLFDSLDEKNSAVWTALFF 785
Query: 261 GYL---QVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAG 317
GY+ Q E + E L+ YR + P+ ++++ +I AC A G QIHS +++AG
Sbjct: 786 GYVKLQQCEAVFELLSEYRK---EAKVPDVLILISIIGACAIQAALVPGKQIHSYMLRAG 842
Query: 318 FDCYDFIQATIIHFYAACGRINLARLQF-ELGIKDHIASWNALIAGFIRNGMIEDARQLF 376
+ ++++ Y+ CG I A F E+ KD I +N +IAG+ +G
Sbjct: 843 IKLDTKLTSSLVDMYSKCGSIIYAERIFREVTDKDSII-YNIMIAGYAHHG--------- 892
Query: 377 NNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLK 436
W +NE A++LF MV G KP+ IT V++ A G ++
Sbjct: 893 ----------W--------ENE----AVQLFKEMVKHGFKPDAITFVALLSACRHGGLVE 930
Query: 437 EGRWAHEYVLNN-SITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIIC 495
G + + N+ +I + A +ID+Y + ++ A E I + +V W A +
Sbjct: 931 LGEHFFDSMSNDYNICPEIDHYACMIDLYGRANQLDKALEFMRKIPIQLDAVI-WGAFLN 989
Query: 496 GLAMHGDANLTLKIYSDL 513
++G+A L K +L
Sbjct: 990 ACRINGNAELARKAEDEL 1007
>gi|255551961|ref|XP_002517025.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543660|gb|EEF45188.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 640
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 194/612 (31%), Positives = 334/612 (54%), Gaps = 35/612 (5%)
Query: 73 LISQAKSMFDSCSTLDPVACNIMISGYIRNDRL---------------NDAREVFDKTPI 117
LIS+ S TL + +++ISG I + L + A ++FD+TP
Sbjct: 5 LISKLLKQCRSLKTLTTIHAHLLISGSIASSDLTLNKLLRLYSKFGAVSYAHKLFDETPE 64
Query: 118 KCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRML 177
+T++I GF +N+ + A F M ++P T+ASV+ + LG I + ++
Sbjct: 65 PNSFLWTALIHGFTENNQYENAFAFFIKMHRENIVPLNFTIASVLKAVSRLGRIKDGDLV 124
Query: 178 HGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLV 237
+GL ++ + +++ ++ ++ C + AR +FDEM+ER+ VSWN M+ G+ G V
Sbjct: 125 YGLAVRCGYEFDLVVKNVMIELFMRCGEMGSARQMFDEMEERDAVSWNSMITGYGNNGRV 184
Query: 238 ELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISAC 297
++AR+LF+R+ ++V+SW +MI GY++ L EA ++ M +A VM+ +S
Sbjct: 185 DIARKLFDRMEERNVISWTSMIQGYVKAGDLLEARVLFERMPEKDLASWKVMVSAYMSVG 244
Query: 298 GRAMA--FGEGLQIHSIIVKAGFDCYDFIQATIIHFYAAC---GRINLARLQFELGIKDH 352
A E + IH + T + C G ++ A+ F+ + +
Sbjct: 245 NLVAARNLFELMPIHDV-------------GTWNLMISGCCKAGEMDAAKEFFDRMQERN 291
Query: 353 IASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVD 412
+ASW +I G+I+ G ++ AR +F+ M ++++ +WS MI GYA+ P +L+L+ +
Sbjct: 292 VASWVMIIDGYIKVGDVDAARSVFDQMPEKNLVAWSTMIGGYAKTGHPYSSLKLYKTFKE 351
Query: 413 AGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINT 472
G+KP+E + + A + G + S+ N + ++IDMYAKCG+I
Sbjct: 352 QGIKPDETFALGIISACSQLGVPDTAESVICDFVGPSLFPNLQVVTSLIDMYAKCGNIER 411
Query: 473 AFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTC 532
A +VF + + + ++ +I A HG + + ++S+++K NIK + + F+GVL+ C
Sbjct: 412 AVQVFEMVDQK--DLHCYSTVITAFANHGLSEDAISLFSEMQKANIKPDGVAFLGVLTAC 469
Query: 533 CHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVI 592
H GLV G R F+ M Y ++P KHY CMVD+LGRAG LE+A +I SMP+ + +
Sbjct: 470 NHGGLVGEGRRLFRQMIDEYGIQPSEKHYACMVDILGRAGCLEEAHSLICSMPVAPNATV 529
Query: 593 WGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRD 652
WG LL+A R+H NV++ E AA L ++P++ + VLL NIYADAG+W+D +R +R+
Sbjct: 530 WGALLSACRVHLNVQLAEAAATELFQIEPNNSGNYVLLFNIYADAGQWDDFSKVRAMIRE 589
Query: 653 CGMKRLPGFSGV 664
+++ G S +
Sbjct: 590 NRVRKNRGSSWI 601
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 126/456 (27%), Positives = 221/456 (48%), Gaps = 42/456 (9%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+ S L+ S + G ++ L + G E + ++N +I L+ +CG + A+ MFD
Sbjct: 103 FTIASVLKAVSRLGRIKDGDLVYGLAVRCGYEFDLVVKNVMIELFMRCGEMGSARQMFDE 162
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
D V+ N MI+GY N R++ AR++FD+ + +S+TSMI G+ + EA +F
Sbjct: 163 MEERDAVSWNSMITGYGNNGRVDIARKLFDRMEERNVISWTSMIQGYVKAGDLLEARVLF 222
Query: 144 RDMRILGVIPNEVTLAS---VISSSVHLGGIWECRMLHGLVI-------KLMIDGFVIIS 193
M E LAS ++S+ + +G + R L L+ LMI G
Sbjct: 223 ERM-------PEKDLASWKVMVSAYMSVGNLVAARNLFELMPIHDVGTWNLMISG----- 270
Query: 194 TNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVV 253
C + A+ FD M+ERN+ SW ++++G+ K G V+ AR +F+++P K++V
Sbjct: 271 ------CCKAGEMDAAKEFFDRMQERNVASWVMIIDGYIKVGDVDAARSVFDQMPEKNLV 324
Query: 254 SWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSII 313
+W TMI GY + +L +Y+ GI P++ + +ISAC + G S+I
Sbjct: 325 AWSTMIGGYAKTGHPYSSLKLYKTFKEQGIKPDETFALGIISACSQ---LGVPDTAESVI 381
Query: 314 VK-AGFDCYDFIQ--ATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIE 370
G + +Q ++I YA CG I A FE+ + + ++ +I F +G+ E
Sbjct: 382 CDFVGPSLFPNLQVVTSLIDMYAKCGNIERAVQVFEMVDQKDLHCYSTVITAFANHGLSE 441
Query: 371 DARQLFNNMQKRDV----YSWSAMISGYAQNEQPNMALELFHGMVDA-GVKPNEITMVSV 425
DA LF+ MQK ++ ++ +++ LF M+D G++P+E +
Sbjct: 442 DAISLFSEMQKANIKPDGVAFLGVLTACNHGGLVGEGRRLFRQMIDEYGIQPSEKHYACM 501
Query: 426 FCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAII 461
+ +G L+E AH + + + N + A++
Sbjct: 502 VDILGRAGCLEE---AHSLICSMPVAPNATVWGALL 534
>gi|225462731|ref|XP_002267928.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic [Vitis vinifera]
gi|302143682|emb|CBI22543.3| unnamed protein product [Vitis vinifera]
Length = 728
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 201/640 (31%), Positives = 335/640 (52%), Gaps = 67/640 (10%)
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
++ NI IS Y + +L+ AR++FD+ P + VS+ +MI ++++ + EAL + M
Sbjct: 33 ISTNIAISNYAKQSKLDVARQLFDQMPQRTVVSWNTMISSYSKHGRFSEALFLVYSMHRS 92
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
+ +E T +SV+S L + + +++H LV+K + F ++ + LL Y C + EA
Sbjct: 93 HMKLSESTFSSVLSVCARLRCLRDGKLIHCLVLKSGSESFELVGSALLYFYASCFEIGEA 152
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQV-ERL 268
R +FD + RN V W++ML G+ +++ A +F ++P +DVV+W T+I G+ + +
Sbjct: 153 RRVFDVLVRRNEVLWSLMLVGYVTCNVMDDALSVFVKMPRRDVVAWTTLISGFSKNGDGC 212
Query: 269 SEALTMYRAMLCDG-IAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQAT 327
+AL ++R M+ G PN+ ++ ACGR G +H +++K G + I
Sbjct: 213 GKALEIFRLMMRSGETTPNEFTFDCVVRACGRLGILSVGRTVHGLLMKCGLEYDPSIGGA 272
Query: 328 IIHFYAAC-------------------------------GRINLARLQFELGIKDHIASW 356
++ FY C GRI A L F + + S+
Sbjct: 273 LVEFYCECEAIDDALRVCKGVVNPCLNALNSLIEGLISMGRIEDAELVFNGMTEMNPVSY 332
Query: 357 NALIAGFIRNGMIEDARQLFNNMQKRDVYS------------------------------ 386
N +I G+ G ++D+++LF M R ++S
Sbjct: 333 NLMIKGYAVGGQMDDSKRLFEKMPCRTIFSSNTMISVYSRNGEIDKALELFEETKNEKDP 392
Query: 387 --WSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEY 444
W++MISGY + QP AL+L+ M ++ + T ++F A + G+L +G+ H +
Sbjct: 393 VTWNSMISGYIHSGQPEEALKLYITMHRLSIQQTQSTFSALFHACSCLGSLHQGQLLHAH 452
Query: 445 VLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDAN 504
++ N + ++IDMY+KCGSI A F I + +V+ W A+I G A HG +
Sbjct: 453 LIKTPFESNVYVGTSLIDMYSKCGSIMEAQTSFVSI--FSPNVAAWTALINGHAYHGLGS 510
Query: 505 LTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCM 564
+ ++ + ++ + N TF+GVLS C AGLV+ G + F SM+ Y+V P L+HY C+
Sbjct: 511 EAISLFDRMIEQGLAPNGATFVGVLSACSRAGLVNEGMKIFHSMERCYSVTPTLEHYACV 570
Query: 565 VDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHG 624
VDLLGR+G + +AEE I+ MP++AD V+WG LL+A ++EVGER A+ + P
Sbjct: 571 VDLLGRSGHIREAEEFIKKMPLEADGVVWGALLSACWFWMDLEVGERVAEKMFSFDPKPI 630
Query: 625 PSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
S V+LSNIYA GRW + +RK +R +K+ PG S +
Sbjct: 631 SSYVILSNIYAGLGRWREKMMVRKILRGFKVKKDPGCSWI 670
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 141/533 (26%), Positives = 236/533 (44%), Gaps = 99/533 (18%)
Query: 9 VFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLY 68
V++ +++++ S E S L C+ + G+ IH L+ KSG ES + ++L+ Y
Sbjct: 86 VYSMHRSHMKLS--ESTFSSVLSVCARLRCLRDGKLIHCLVLKSGSESFELVGSALLYFY 143
Query: 69 AKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIM 128
A C I +A+ +FD + V ++M+ GY+ + ++DA VF K P + V++T++I
Sbjct: 144 ASCFEIGEARRVFDVLVRRNEVLWSLMLVGYVTCNVMDDALSVFVKMPRRDVVAWTTLIS 203
Query: 129 GFAQN-DCWREALEVFRDMRILG-VIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMI 186
GF++N D +ALE+FR M G PNE T V+ + LG + R +HGL++K +
Sbjct: 204 GFSKNGDGCGKALEIFRLMMRSGETTPNEFTFDCVVRACGRLGILSVGRTVHGLLMKCGL 263
Query: 187 DGFVIISTNLLNMYCVC---------------------SSLVE----------ARSLFDE 215
+ I L+ YC C +SL+E A +F+
Sbjct: 264 EYDPSIGGALVEFYCECEAIDDALRVCKGVVNPCLNALNSLIEGLISMGRIEDAELVFNG 323
Query: 216 MKERNIVSWNVMLNGFAKAGLVELARELFERIP--------------------------- 248
M E N VS+N+M+ G+A G ++ ++ LFE++P
Sbjct: 324 MTEMNPVSYNLMIKGYAVGGQMDDSKRLFEKMPCRTIFSSNTMISVYSRNGEIDKALELF 383
Query: 249 -----SKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAF 303
KD V+W +MI GY+ + EAL +Y M I L AC +
Sbjct: 384 EETKNEKDPVTWNSMISGYIHSGQPEEALKLYITMHRLSIQQTQSTFSALFHACSCLGSL 443
Query: 304 GEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGF 363
+G +H+ ++K F+ ++ ++I Y+ CG I A+ F ++A+W ALI G
Sbjct: 444 HQGQLLHAHLIKTPFESNVYVGTSLIDMYSKCGSIMEAQTSFVSIFSPNVAAWTALINGH 503
Query: 364 IRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMV 423
+G+ +A LF+ M++ G+ PN T V
Sbjct: 504 AYHGLGSEAISLFDR-------------------------------MIEQGLAPNGATFV 532
Query: 424 SVFCAIASSGTLKEG-RWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFE 475
V A + +G + EG + H S+T A ++D+ + G I A E
Sbjct: 533 GVLSACSRAGLVNEGMKIFHSMERCYSVTPTLEHYACVVDLLGRSGHIREAEE 585
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 101/394 (25%), Positives = 206/394 (52%), Gaps = 23/394 (5%)
Query: 221 IVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLC 280
I+S N+ ++ +AK +++AR+LF+++P + VVSW TMI Y + R SEAL + +M
Sbjct: 32 IISTNIAISNYAKQSKLDVARQLFDQMPQRTVVSWNTMISSYSKHGRFSEALFLVYSMHR 91
Query: 281 DGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINL 340
+ ++ ++S C R +G IH +++K+G + ++ + + +++FYA+C I
Sbjct: 92 SHMKLSESTFSSVLSVCARLRCLRDGKLIHCLVLKSGSESFELVGSALLYFYASCFEIGE 151
Query: 341 ARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQN-EQ 399
AR F++ ++ + W+ ++ G++ +++DA +F M +RDV +W+ +ISG+++N +
Sbjct: 152 ARRVFDVLVRRNEVLWSLMLVGYVTCNVMDDALSVFVKMPRRDVVAWTTLISGFSKNGDG 211
Query: 400 PNMALELFHGMVDAG-VKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSA 458
ALE+F M+ +G PNE T V A G L GR H ++ + + ++
Sbjct: 212 CGKALEIFRLMMRSGETTPNEFTFDCVVRACGRLGILSVGRTVHGLLMKCGLEYDPSIGG 271
Query: 459 AIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHG---DANLTLKIYSDLEK 515
A+++ Y +C +I+ A V + + ++ N++I GL G DA L ++
Sbjct: 272 ALVEFYCECEAIDDALRVCKGVVN--PCLNALNSLIEGLISMGRIEDAELVFNGMTE--- 326
Query: 516 RNIKLNSITFIGVLSTCCHAGLVDLGERYFKSM--KSVYNVEPDLKHYGCMVDLLGRAGQ 573
+N +++ ++ G +D +R F+ M +++++ M+ + R G+
Sbjct: 327 ----MNPVSYNLMIKGYAVGGQMDDSKRLFEKMPCRTIFSSNT-------MISVYSRNGE 375
Query: 574 LEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVE 607
++ A E+ + D V W ++++ G E
Sbjct: 376 IDKALELFEETKNEKDPVTWNSMISGYIHSGQPE 409
>gi|115480595|ref|NP_001063891.1| Os09g0555400 [Oryza sativa Japonica Group]
gi|113632124|dbj|BAF25805.1| Os09g0555400 [Oryza sativa Japonica Group]
gi|125606583|gb|EAZ45619.1| hypothetical protein OsJ_30287 [Oryza sativa Japonica Group]
Length = 644
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 190/558 (34%), Positives = 302/558 (54%), Gaps = 35/558 (6%)
Query: 108 AREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVH 167
AR++FD+ P Y S+I + + C +EAL + R M G++PNE TL ++ +
Sbjct: 63 ARQLFDRIPDPDRFVYNSLIRAYCNSHCPQEALPLLRGMIRRGILPNEFTLPFLLKACAR 122
Query: 168 LGGIWECRML-HGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNV 226
+ WE M+ HG+V+KL G V + LL+ Y SL ++R FDEM +RN+VSWN
Sbjct: 123 VQA-WEHVMVTHGVVVKLGFVGQVFVGNALLHSYASAGSLGDSRRFFDEMVDRNVVSWNS 181
Query: 227 MLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPN 286
M+NG+A+AG EA +++ M G+ +
Sbjct: 182 MINGYAQAG-------------------------------NTREACSLFEGMRRQGLLAD 210
Query: 287 DVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFE 346
+ +V L+ AC G +HS ++ G + ++ Y CG + +A F+
Sbjct: 211 EFTLVSLLFACSAEGNLEFGKLVHSHLLVRGCRIDLILANALVDMYGKCGDLLMAHTCFD 270
Query: 347 LGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALEL 406
+ + SW +++ + I+ AR F + ++ + SW+AMIS Y Q + + AL+L
Sbjct: 271 MMPFKNAVSWTSMLCALAKRASIDAARDWFEQIPEKSIISWNAMISCYVQGGRFHEALDL 330
Query: 407 FHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAK 466
++ M G+ P+E T+ +V A G L G+ H+ + +N L +++DMYA+
Sbjct: 331 YNRMKLLGLAPDEFTLAAVLSACGQLGDLASGKMIHDCIRDNFHNPGVALFNSLLDMYAR 390
Query: 467 CGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFI 526
CG ++TA +F + + +V WNAII LAMHG A L + + + ITF+
Sbjct: 391 CGQVDTAISLFSEMPSK--NVISWNAIIGALAMHGRAQDALMFFRSMVFDAFPPDEITFV 448
Query: 527 GVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPM 586
+LS C H GL++ G+ YF++M+ VYNV+P ++HY CMVDLLGR GQL A ++I+ MPM
Sbjct: 449 ALLSACNHGGLLEAGQYYFQAMRHVYNVKPGVEHYACMVDLLGRGGQLAKAVDLIKDMPM 508
Query: 587 KADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSI 646
+ DVV+WG LL A RIHG++++G++ K L L+ G VL+SN+ + +WED +
Sbjct: 509 RPDVVVWGALLGACRIHGHIQIGKQVIKQLLELEGMSGGLFVLISNMLYETHQWEDMKRL 568
Query: 647 RKEMRDCGMKRLPGFSGV 664
RK MR+ GMK+ G S +
Sbjct: 569 RKLMREWGMKKNMGVSSI 586
Score = 172 bits (437), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 133/496 (26%), Positives = 215/496 (43%), Gaps = 72/496 (14%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E L L+ C+ A H ++ K G F+ N+L++ YA G
Sbjct: 110 EFTLPFLLKACARVQAWEHVMVTHGVVVKLGFVGQVFVGNALLHSYASAG---------- 159
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
L D+R FD+ + VS+ SMI G+AQ REA +
Sbjct: 160 ---------------------SLGDSRRFFDEMVDRNVVSWNSMINGYAQAGNTREACSL 198
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHG--LVIKLMIDGFVIISTNLLNMY 200
F MR G++ +E TL S++ + G + +++H LV ID +I++ L++MY
Sbjct: 199 FEGMRRQGLLADEFTLVSLLFACSAEGNLEFGKLVHSHLLVRGCRID--LILANALVDMY 256
Query: 201 CVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMID 260
C L+ A + FD M +N VSW ML AK ++ AR+ FE+IP K ++SW MI
Sbjct: 257 GKCGDLLMAHTCFDMMPFKNAVSWTSMLCALAKRASIDAARDWFEQIPEKSIISWNAMIS 316
Query: 261 GYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDC 320
Y+Q R EAL +Y M G+AP++ + ++SACG+ G IH I +
Sbjct: 317 CYVQGGRFHEALDLYNRMKLLGLAPDEFTLAAVLSACGQLGDLASGKMIHDCIRDNFHNP 376
Query: 321 YDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ 380
+ +++ YA CG+++ A F ++ SWNA+I +G +D
Sbjct: 377 GVALFNSLLDMYARCGQVDTAISLFSEMPSKNVISWNAIIGALAMHGRAQD--------- 427
Query: 381 KRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRW 440
AL F MV P+EIT V++ A G L+ G++
Sbjct: 428 ----------------------ALMFFRSMVFDAFPPDEITFVALLSACNHGGLLEAGQY 465
Query: 441 ---AHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGL 497
A +V N + A ++D+ + G + A ++ + R V W A++
Sbjct: 466 YFQAMRHVYN--VKPGVEHYACMVDLLGRGGQLAKAVDLIKDMPMRPDVVV-WGALLGAC 522
Query: 498 AMHGDANLTLKIYSDL 513
+HG + ++ L
Sbjct: 523 RIHGHIQIGKQVIKQL 538
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 101/405 (24%), Positives = 181/405 (44%), Gaps = 66/405 (16%)
Query: 234 AGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDL 293
G V AR+LF+RIP D + ++I Y EAL + R M+ GI PN+ + L
Sbjct: 57 GGGVWYARQLFDRIPDPDRFVYNSLIRAYCNSHCPQEALPLLRGMIRRGILPNEFTLPFL 116
Query: 294 ISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHI 353
+ AC R A+ + H ++VK GF F+ ++H YA+ G + +R F+ + ++
Sbjct: 117 LKACARVQAWEHVMVTHGVVVKLGFVGQVFVGNALLHSYASAGSLGDSRRFFDEMVDRNV 176
Query: 354 ASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDA 413
SWN++I G+ + G +A LF M+++
Sbjct: 177 VSWNSMINGYAQAGNTREACSLFEGMRRQ------------------------------- 205
Query: 414 GVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCG----- 468
G+ +E T+VS+ A ++ G L+ G+ H ++L ++ L+ A++DMY KCG
Sbjct: 206 GLLADEFTLVSLLFACSAEGNLEFGKLVHSHLLVRGCRIDLILANALVDMYGKCGDLLMA 265
Query: 469 --------------------------SINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGD 502
SI+ A + F I ++ S+ WNA+I G
Sbjct: 266 HTCFDMMPFKNAVSWTSMLCALAKRASIDAARDWFEQIPEK--SIISWNAMISCYVQGGR 323
Query: 503 ANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYG 562
+ L +Y+ ++ + + T VLS C G + G+ ++ ++ P + +
Sbjct: 324 FHEALDLYNRMKLLGLAPDEFTLAAVLSACGQLGDLASGKMIHDCIRDNFH-NPGVALFN 382
Query: 563 CMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVE 607
++D+ R GQ++ A + MP K +V+ W ++ A +HG +
Sbjct: 383 SLLDMYARCGQVDTAISLFSEMPSK-NVISWNAIIGALAMHGRAQ 426
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 135/308 (43%), Gaps = 21/308 (6%)
Query: 353 IASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVD 412
+AS+ AL AG G + ARQLF+ + D + ++++I Y + P AL L GM+
Sbjct: 48 LASYCALPAG----GGVWYARQLFDRIPDPDRFVYNSLIRAYCNSHCPQEALPLLRGMIR 103
Query: 413 AGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINT 472
G+ PNE T+ + A A + H V+ + A++ YA GS+
Sbjct: 104 RGILPNEFTLPFLLKACARVQAWEHVMVTHGVVVKLGFVGQVFVGNALLHSYASAGSLGD 163
Query: 473 AFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTC 532
+ F + DR +V WN++I G A G+ ++ + ++ + + T + +L C
Sbjct: 164 SRRFFDEMVDR--NVVSWNSMINGYAQAGNTREACSLFEGMRRQGLLADEFTLVSLLFAC 221
Query: 533 CHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVI 592
G ++ G + S V DL +VD+ G+ G L A MP K + V
Sbjct: 222 SAEGNLEFG-KLVHSHLLVRGCRIDLILANALVDMYGKCGDLLMAHTCFDMMPFK-NAVS 279
Query: 593 WGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLS-----NIYADAGRWEDAFSIR 647
W ++L A + +RA+ A P + ++S + Y GR+ +A +
Sbjct: 280 WTSMLCA--------LAKRASIDAARDWFEQIPEKSIISWNAMISCYVQGGRFHEALDLY 331
Query: 648 KEMRDCGM 655
M+ G+
Sbjct: 332 NRMKLLGL 339
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/244 (20%), Positives = 102/244 (41%), Gaps = 43/244 (17%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E L + L C ++ G+ IH I + + NSL+++YA+CG + A S+F
Sbjct: 343 EFTLAAVLSACGQLGDLASGKMIHDCIRDNFHNPGVALFNSLLDMYARCGQVDTAISLFS 402
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+ P K +S+ ++I A + ++AL
Sbjct: 403 -------------------------------EMPSKNVISWNAIIGALAMHGRAQDALMF 431
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWEC------RMLHGLVIKLMIDGFVIISTNL 196
FR M P+E+T +++S+ H GG+ E M H +K ++ + +
Sbjct: 432 FRSMVFDAFPPDEITFVALLSACNH-GGLLEAGQYYFQAMRHVYNVKPGVEHYAC----M 486
Query: 197 LNMYCVCSSLVEARSLFDEMKER-NIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSW 255
+++ L +A L +M R ++V W +L G +++ +++ +++ + +S
Sbjct: 487 VDLLGRGGQLAKAVDLIKDMPMRPDVVVWGALLGACRIHGHIQIGKQVIKQLLELEGMSG 546
Query: 256 GTMI 259
G +
Sbjct: 547 GLFV 550
>gi|357167614|ref|XP_003581249.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21300-like
[Brachypodium distachyon]
Length = 1430
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 208/620 (33%), Positives = 320/620 (51%), Gaps = 40/620 (6%)
Query: 50 FKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAR 109
KS + TF+ N+L++ YA+ G + A+ +FD + + N ++S + R R DAR
Sbjct: 787 LKSPFVAETFLLNTLVSAYARLGRLPDARRVFDEIPHPNTFSYNALLSAHARLGRPADAR 846
Query: 110 EVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLG 169
+F P SY ++I AQ+ +AL M + N + AS +S+
Sbjct: 847 ALFHAIPDPDQCSYNAVIAALAQHSRGADALLFLAAMHADDFVLNAYSFASALSACAAEK 906
Query: 170 GIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLN 229
+H LV K V I + LL+MY C EAR +F+ M ERNIVSWN ++
Sbjct: 907 DSRTGVQVHALVSKSPHAKDVYIGSALLDMYAKCEWPEEARRVFEAMPERNIVSWNSLIT 966
Query: 230 GFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVM 289
+ + G V EAL ++ +M+ G P++V
Sbjct: 967 CYEQNGPV-------------------------------GEALVLFVSMMKAGFVPDEVT 995
Query: 290 IVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQA-TIIHFYAACGRINLARLQFELG 348
+ ++SAC A EG Q+H+ +VK+ D + + ++ YA CGR AR F+
Sbjct: 996 LASVMSACAGLAADREGRQVHARVVKSDRFREDMVLSNALVDMYAKCGRTRAARCVFDRM 1055
Query: 349 IKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFH 408
+ S +LI G+ R+ +EDA+ +F+ M +++V +W+ +I+ YAQN + AL LF
Sbjct: 1056 ASRSVVSETSLITGYARSANVEDAQMVFSQMVEKNVIAWNVLIAAYAQNGEEEEALRLFV 1115
Query: 409 GMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSA------AIID 462
+ V P T +V A + L+ G+ AH +VL + + +++D
Sbjct: 1116 RLKRESVWPTHYTYGNVLNACGNVADLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVD 1175
Query: 463 MYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNS 522
MY K GSI+ +VF + R +VS WNA+I G A +G A L ++ + +S
Sbjct: 1176 MYLKTGSIDDGAKVFERMAAR-DNVS-WNAMIVGHAQNGRAKDALHLFERMLCSKESPDS 1233
Query: 523 ITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIR 582
+T IGVLS C H+GLV+ G RYF+SM + + P HY CM+DLLGRAG L++ EE+I+
Sbjct: 1234 VTMIGVLSACGHSGLVEEGRRYFRSMTEDHGIIPSQDHYTCMIDLLGRAGHLKEVEELIK 1293
Query: 583 SMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWED 642
M M+ D V+W +LL + R+H NVE+GE AA L L P + VLLSN+YA+ G+W D
Sbjct: 1294 EMSMEPDAVLWASLLGSCRLHKNVEMGEWAAGKLFELDPRNSGPYVLLSNMYAELGKWAD 1353
Query: 643 AFSIRKEMRDCGMKRLPGFS 662
F +R M+ G+ + PG S
Sbjct: 1354 VFRVRSSMKHRGVSKQPGCS 1373
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 163/638 (25%), Positives = 299/638 (46%), Gaps = 73/638 (11%)
Query: 26 LVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCS 85
+ S L C+ + + +Q+H I K +SN + +L+++Y C L++ A+ FD
Sbjct: 154 MASVLSCCAECLDLCGARQLHGHIAKRDFQSNVILGTALVDVYGNCFLLADARRAFDDIL 213
Query: 86 TLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRD 145
+ ++ N+++ Y + G A+++F
Sbjct: 214 EPNAISWNVIVRRY--------------------------HLAGMGDM-----AVDMFFR 242
Query: 146 MRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSS 205
M GV P T++ + + + E R +H V++ + V + +++++MY C +
Sbjct: 243 MLSAGVRPLGYTVSHAVLACRDNNALEEGRCIHAFVLRHGYEHHVHVRSSVVDMYAKCGA 302
Query: 206 LVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQV 265
+ A+SLF+ +++V +++G A G + A+ +FE + +++VSW M+ GY++
Sbjct: 303 MDAAQSLFNLAPMKDMVMSTSIVSGLASCGRIADAKRVFEGMKERNLVSWNAMLTGYIRS 362
Query: 266 ERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQ 325
L+ AL +++ M + + + + ++SAC + G+G ++H+ +K GF ++
Sbjct: 363 MDLTGALLLFQQMRQETREFDAITLGSVLSACTGILDIGKGEEVHAFAIKCGFFSSPILK 422
Query: 326 ATIIHFYAACGRINLAR--LQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRD 383
++ Y+ CG + A L FE+G + SWN+LI+G+ R+ M E A MQ
Sbjct: 423 NALVRMYSKCGCLRSAERLLLFEMGSERDSYSWNSLISGYERHSMSEAALYALTKMQSE- 481
Query: 384 VYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHE 443
V PN+ T S A A+ LK+G H
Sbjct: 482 -------------------------------VTPNQSTFSSALAACANIFLLKQGMQIHA 510
Query: 444 YVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDA 503
Y++ ++D L + +IDMY KC + + +F R V WN++I G A G
Sbjct: 511 YMIRKGYEIDDILRSVLIDMYCKCRQFDYSIRIFEARPSR--DVILWNSMIFGCAYSGKG 568
Query: 504 NLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGC 563
L ++ +++K+ IK +S+TF+G L +C G V LG YF M ++ P ++HY C
Sbjct: 569 EYGLDLFDEMQKQGIKADSVTFLGALVSCISEGHVRLGRSYFTLMMD-ESIIPRIEHYEC 627
Query: 564 MVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSH 623
M++LLG+ G + + E+ + MP + +W + R +GN ++GERAAK + P
Sbjct: 628 MIELLGKHGCMVELEDFVEHMPFEPTTAMWLRIFDCCREYGNRKLGERAAKCINDSNPL- 686
Query: 624 GPSRVLLSNIYA--DAGRWEDAFSIRKEMRDCGMKRLP 659
P + + + Y D GR ++ S E C + LP
Sbjct: 687 TPVQFVATVDYESNDGGREAESTSFSSEGEGC--EELP 722
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 130/485 (26%), Positives = 230/485 (47%), Gaps = 63/485 (12%)
Query: 25 ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSC 84
+ SAL C+A G Q+H+L+ KS + +I ++L+++YAKC +A+ +F++
Sbjct: 894 SFASALSACAAEKDSRTGVQVHALVSKSPHAKDVYIGSALLDMYAKCEWPEEARRVFEA- 952
Query: 85 STLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFR 144
P + VS+ S+I + QN EAL +F
Sbjct: 953 ------------------------------MPERNIVSWNSLITCYEQNGPVGEALVLFV 982
Query: 145 DMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGF---VIISTNLLNMYC 201
M G +P+EVTLASV+S+ L E R +H V+K D F +++S L++MY
Sbjct: 983 SMMKAGFVPDEVTLASVMSACAGLAADREGRQVHARVVK--SDRFREDMVLSNALVDMYA 1040
Query: 202 VCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDG 261
C AR +FD M R++VS ++ G+A++ VE A+ +F ++ K+V++W +I
Sbjct: 1041 KCGRTRAARCVFDRMASRSVVSETSLITGYARSANVEDAQMVFSQMVEKNVIAWNVLIAA 1100
Query: 262 YLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCY 321
Y Q EAL ++ + + + P ++++ACG G Q H ++K GF
Sbjct: 1101 YAQNGEEEEALRLFVRLKRESVWPTHYTYGNVLNACGNVADLQLGQQAHVHVLKEGF--- 1157
Query: 322 DFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQK 381
+F+ G + + N+L+ +++ G I+D ++F M
Sbjct: 1158 ----------------------RFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAA 1195
Query: 382 RDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG-RW 440
RD SW+AMI G+AQN + AL LF M+ + P+ +TM+ V A SG ++EG R+
Sbjct: 1196 RDNVSWNAMIVGHAQNGRAKDALHLFERMLCSKESPDSVTMIGVLSACGHSGLVEEGRRY 1255
Query: 441 AHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMH 500
++ I + + +ID+ + G + E+ + +V W +++ +H
Sbjct: 1256 FRSMTEDHGIIPSQDHYTCMIDLLGRAGHLKEVEELIKEMSMEPDAVL-WASLLGSCRLH 1314
Query: 501 GDANL 505
+ +
Sbjct: 1315 KNVEM 1319
Score = 191 bits (484), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 130/505 (25%), Positives = 242/505 (47%), Gaps = 38/505 (7%)
Query: 107 DAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSV 166
DARE+FD P++ S+ ++I ++ EAL +F +M LG+ P + T+ASV+S
Sbjct: 103 DARELFDLMPLRDGGSWNAIITASSRAGHPSEALSLFSNMNSLGIRPKDATMASVLSCCA 162
Query: 167 HLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNV 226
+ R LHG + K VI+ T L+++Y C L +AR FD++ E N +SWNV
Sbjct: 163 ECLDLCGARQLHGHIAKRDFQSNVILGTALVDVYGNCFLLADARRAFDDILEPNAISWNV 222
Query: 227 MLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPN 286
++ + AG+ ++A ++F R ML G+ P
Sbjct: 223 IVRRYHLAGMGDMAVDMFFR-------------------------------MLSAGVRPL 251
Query: 287 DVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFE 346
+ + AC A EG IH+ +++ G++ + ++++++ YA CG ++ A+ F
Sbjct: 252 GYTVSHAVLACRDNNALEEGRCIHAFVLRHGYEHHVHVRSSVVDMYAKCGAMDAAQSLFN 311
Query: 347 LG-IKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALE 405
L +KD + S ++++G G I DA+++F M++R++ SW+AM++GY ++ AL
Sbjct: 312 LAPMKDMVMS-TSIVSGLASCGRIADAKRVFEGMKERNLVSWNAMLTGYIRSMDLTGALL 370
Query: 406 LFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYA 465
LF M + + IT+ SV A + +G H + + + L A++ MY+
Sbjct: 371 LFQQMRQETREFDAITLGSVLSACTGILDIGKGEEVHAFAIKCGFFSSPILKNALVRMYS 430
Query: 466 KCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITF 525
KCG + +A + WN++I G H + L + ++ + N TF
Sbjct: 431 KCGCLRSAERLLLFEMGSERDSYSWNSLISGYERHSMSEAALYALTKMQS-EVTPNQSTF 489
Query: 526 IGVLSTCCHAGLVDLGERYFKSM-KSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSM 584
L+ C + L+ G + M + Y ++ L+ ++D+ + Q + + + +
Sbjct: 490 SSALAACANIFLLKQGMQIHAYMIRKGYEIDDILR--SVLIDMYCKCRQFDYSIRIFEAR 547
Query: 585 PMKADVVIWGTLLAASRIHGNVEVG 609
P + DV++W +++ G E G
Sbjct: 548 PSR-DVILWNSMIFGCAYSGKGEYG 571
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 106/445 (23%), Positives = 188/445 (42%), Gaps = 71/445 (15%)
Query: 224 WNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGI 283
+N + A G V ARELF+ +P +D SW +I + SEAL+++ M GI
Sbjct: 88 FNRAIESLAACGSVADARELFDLMPLRDGGSWNAIITASSRAGHPSEALSLFSNMNSLGI 147
Query: 284 APNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARL 343
P D + ++S C + Q+H I K F + ++ Y C + AR
Sbjct: 148 RPKDATMASVLSCCAECLDLCGARQLHGHIAKRDFQSNVILGTALVDVYGNCFLLADARR 207
Query: 344 QFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMA 403
F+ ++ + SWN ++ + GM +MA
Sbjct: 208 AFDDILEPNAISWNVIVRRYHLAGM-------------------------------GDMA 236
Query: 404 LELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDM 463
+++F M+ AGV+P T+ A + L+EGR H +VL + + ++ ++++DM
Sbjct: 237 VDMFFRMLSAGVRPLGYTVSHAVLACRDNNALEEGRCIHAFVLRHGYEHHVHVRSSVVDM 296
Query: 464 YAKCGSINTAFEVF--YHIRDRTTSVS---------------------------PWNAII 494
YAKCG+++ A +F ++D S S WNA++
Sbjct: 297 YAKCGAMDAAQSLFNLAPMKDMVMSTSIVSGLASCGRIADAKRVFEGMKERNLVSWNAML 356
Query: 495 CGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLG---ERYFKSMKSV 551
G D L ++ + + + ++IT VLS C G++D+G E + ++K
Sbjct: 357 TGYIRSMDLTGALLLFQQMRQETREFDAITLGSVLSAC--TGILDIGKGEEVHAFAIKCG 414
Query: 552 YNVEPDLKHYGCMVDLLGRAGQLEDAEEVIR-SMPMKADVVIWGTLLAASRIHGNVEVGE 610
+ P LK+ +V + + G L AE ++ M + D W +L++ H + E
Sbjct: 415 FFSSPILKN--ALVRMYSKCGCLRSAERLLLFEMGSERDSYSWNSLISGYERHS---MSE 469
Query: 611 RAAKSLAGLQPSHGPSRVLLSNIYA 635
A +L +Q P++ S+ A
Sbjct: 470 AALYALTKMQSEVTPNQSTFSSALA 494
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 141/294 (47%), Gaps = 44/294 (14%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSG-LESNTFIQNSLINLYAKCGLISQAKSMF 81
E+ L S + C+ A +G+Q+H+ + KS + + N+L+++YAKCG A+ +F
Sbjct: 993 EVTLASVMSACAGLAADREGRQVHARVVKSDRFREDMVLSNALVDMYAKCGRTRAARCVF 1052
Query: 82 DSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALE 141
D ++ V+ +I+GY R+ + DA+ VF + K +++ +I +AQN EAL
Sbjct: 1053 DRMASRSVVSETSLITGYARSANVEDAQMVFSQMVEKNVIAWNVLIAAYAQNGEEEEALR 1112
Query: 142 VFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGF---------VII 192
+F ++ V P T +V+++ ++ + + H V+K +GF V +
Sbjct: 1113 LFVRLKRESVWPTHYTYGNVLNACGNVADLQLGQQAHVHVLK---EGFRFDFGPESDVFV 1169
Query: 193 STNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDV 252
+L++MY S+ + +F+ M R+ VSWN M+ G A+ G + A LFER
Sbjct: 1170 GNSLVDMYLKTGSIDDGAKVFERMAARDNVSWNAMIVGHAQNGRAKDALHLFER------ 1223
Query: 253 VSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEG 306
MLC +P+ V ++ ++SACG + EG
Sbjct: 1224 -------------------------MLCSKESPDSVTMIGVLSACGHSGLVEEG 1252
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 111/243 (45%), Gaps = 35/243 (14%)
Query: 13 QKANLQNSDYE-LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKC 71
Q+ + +++ + L S L C+ + + +G+++H+ K G S+ ++N+L+ +Y+KC
Sbjct: 373 QQMRQETREFDAITLGSVLSACTGILDIGKGEEVHAFAIKCGFFSSPILKNALVRMYSKC 432
Query: 72 GLISQAKSM--FDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMG 129
G + A+ + F+ S D + N +ISGY R+ A K +
Sbjct: 433 GCLRSAERLLLFEMGSERDSYSWNSLISGYERHSMSEAALYALTKMQSE----------- 481
Query: 130 FAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGF 189
V PN+ T +S +++ ++ + + +H +I+ +
Sbjct: 482 ---------------------VTPNQSTFSSALAACANIFLLKQGMQIHAYMIRKGYEID 520
Query: 190 VIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPS 249
I+ + L++MYC C + +F+ R+++ WN M+ G A +G E +LF+ +
Sbjct: 521 DILRSVLIDMYCKCRQFDYSIRIFEARPSRDVILWNSMIFGCAYSGKGEYGLDLFDEMQK 580
Query: 250 KDV 252
+ +
Sbjct: 581 QGI 583
>gi|359484317|ref|XP_003633097.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 1005
Score = 343 bits (879), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 202/642 (31%), Positives = 316/642 (49%), Gaps = 95/642 (14%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
+ L + L+ C+ + GQ +HSL + G E + FI L+++Y+KCGL
Sbjct: 330 KFTLSTVLKGCANSGNLRAGQIVHSLAIRIGCELDEFISCCLVDMYSKCGLAG------- 382
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
DA +VF + VS++++I Q REA EV
Sbjct: 383 ------------------------DALKVFVRIEDPDVVSWSAIITCLDQKGQSREAAEV 418
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
F+ MR GVIPN+ TLAS++S++ LG ++ +H V K GF +T V
Sbjct: 419 FKRMRHSGVIPNQFTLASLVSAATDLGDLYYGESIHACVCKY---GFEYDNT-------V 468
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
C++LV + K G V+ +FE ++D++SW ++ G+
Sbjct: 469 CNALVTM---------------------YMKIGSVQDGCRVFEATTNRDLISWNALLSGF 507
Query: 263 LQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD 322
E L ++ ML +G PN + ++ +C G Q+H+ IVK D D
Sbjct: 508 HDNETCDTGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGND 567
Query: 323 FIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKR 382
F+ ++ YA +N +EDA +FN + KR
Sbjct: 568 FVGTALVDMYA-------------------------------KNRFLEDAETIFNRLIKR 596
Query: 383 DVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAH 442
D+++W+ +++GYAQ+ Q A++ F M GVKPNE T+ S + TL GR H
Sbjct: 597 DLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLH 656
Query: 443 EYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGD 502
+ + + +++A++DMYAKCG + A VF + R T WN IICG + HG
Sbjct: 657 SMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTV--SWNTIICGYSQHGQ 714
Query: 503 ANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYG 562
LK + + + +TFIGVLS C H GL++ G+++F S+ +Y + P ++HY
Sbjct: 715 GGKALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYA 774
Query: 563 CMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPS 622
CMVD+LGRAG+ + E I M + ++V+IW T+L A ++HGN+E GERAA L L+P
Sbjct: 775 CMVDILGRAGKFHEVESFIEEMKLTSNVLIWETVLGACKMHGNIEFGERAAMKLFELEPE 834
Query: 623 HGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
+ +LLSN++A G W+D ++R M G+K+ PG S V
Sbjct: 835 IDSNYILLSNMFAAKGMWDDVTNVRALMSTRGVKKEPGCSWV 876
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 150/592 (25%), Positives = 251/592 (42%), Gaps = 102/592 (17%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
LR C++ +++G+ IH + KSG+ ++ + NSL+N+YAKCG
Sbjct: 135 LRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCG----------------- 177
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
N A +VF + P + VS+T++I GF A+ +F +MR
Sbjct: 178 --------------SANYACKVFGEIPERDVVSWTALITGFVAEGYGSGAVNLFCEMRRE 223
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
GV NE T A+ + + + + +H IK+ + + + L+++Y C +V A
Sbjct: 224 GVEANEFTYATALKACSMCLDLEFGKQVHAEAIKVGDFSDLFVGSALVDLYAKCGEMVLA 283
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLS 269
+F M ++N VSWN +LNGFA+ G E LF R+ +
Sbjct: 284 ERVFLCMPKQNAVSWNALLNGFAQMGDAEKVLNLFCRMTGSE------------------ 325
Query: 270 EALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATII 329
I + + ++ C + G +HS+ ++ G + +FI ++
Sbjct: 326 -------------INFSKFTLSTVLKGCANSGNLRAGQIVHSLAIRIGCELDEFISCCLV 372
Query: 330 HFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSA 389
Y+ CG +AG DA ++F ++ DV SWSA
Sbjct: 373 DMYSKCG-----------------------LAG--------DALKVFVRIEDPDVVSWSA 401
Query: 390 MISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNS 449
+I+ Q Q A E+F M +GV PN+ T+ S+ A G L G H V
Sbjct: 402 IITCLDQKGQSREAAEVFKRMRHSGVIPNQFTLASLVSAATDLGDLYYGESIHACVCKYG 461
Query: 450 ITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKI 509
++ + A++ MY K GS+ VF +R + WNA++ G + + L+I
Sbjct: 462 FEYDNTVCNALVTMYMKIGSVQDGCRVFEATTNR--DLISWNALLSGFHDNETCDTGLRI 519
Query: 510 YSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYG-CMVDLL 568
++ + N TFI +L +C VDLG++ + V N G +VD+
Sbjct: 520 FNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQI--VKNSLDGNDFVGTALVDMY 577
Query: 569 GRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQ 620
+ LEDAE + + +K D+ W ++A G GE+A K +Q
Sbjct: 578 AKNRFLEDAETIFNRL-IKRDLFAWTVIVAGYAQDGQ---GEKAVKCFIQMQ 625
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 140/597 (23%), Positives = 244/597 (40%), Gaps = 100/597 (16%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E +AL+ CS + + G+Q+H+ K G S+ F+ ++L++LYAKCG
Sbjct: 229 EFTYATALKACSMCLDLEFGKQVHAEAIKVGDFSDLFVGSALVDLYAKCG---------- 278
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+ A VF P + VS+ +++ GFAQ + L +
Sbjct: 279 ---------------------EMVLAERVFLCMPKQNAVSWNALLNGFAQMGDAEKVLNL 317
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
F M + ++ TL++V+ + G + +++H L I++ + IS L++MY
Sbjct: 318 FCRMTGSEINFSKFTLSTVLKGCANSGNLRAGQIVHSLAIRIGCELDEFISCCLVDMYSK 377
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
C +A +F +++ ++VSW+ ++ + G A E+F+R
Sbjct: 378 CGLAGDALKVFVRIEDPDVVSWSAIITCLDQKGQSREAAEVFKR---------------- 421
Query: 263 LQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD 322
M G+ PN + L+SA G IH+ + K GF+ +
Sbjct: 422 ---------------MRHSGVIPNQFTLASLVSAATDLGDLYYGESIHACVCKYGFEYDN 466
Query: 323 FIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKR 382
+ ++ Y G + FE + SWNAL++GF
Sbjct: 467 TVCNALVTMYMKIGSVQDGCRVFEATTNRDLISWNALLSGF------------------- 507
Query: 383 DVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAH 442
NE + L +F+ M+ G PN T +S+ + +S + G+ H
Sbjct: 508 ------------HDNETCDTGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVH 555
Query: 443 EYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGD 502
++ NS+ ND + A++DMYAK + A +F + R + W I+ G A G
Sbjct: 556 AQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKR--DLFAWTVIVAGYAQDGQ 613
Query: 503 ANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYG 562
+K + +++ +K N T LS C +D G R SM D+
Sbjct: 614 GEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSG-RQLHSMAIKAGQSGDMFVAS 672
Query: 563 CMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGL 619
+VD+ + G +EDAE V + + D V W T++ HG G +A K+ +
Sbjct: 673 ALVDMYAKCGCVEDAEVVFDGL-VSRDTVSWNTIICGYSQHGQ---GGKALKAFEAM 725
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 137/298 (45%), Gaps = 63/298 (21%)
Query: 9 VFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLY 68
+FN A N + +S LR CS+ V G+Q+H+ I K+ L+ N F+ +L+++Y
Sbjct: 519 IFNQMLAEGFNPNM-YTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMY 577
Query: 69 AKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIM 128
AK + A+++F N +I R++F ++T ++
Sbjct: 578 AKNRFLEDAETIF-----------NRLIK-----------RDLF---------AWTVIVA 606
Query: 129 GFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDG 188
G+AQ+ +A++ F M+ GV PNE TLAS +S + + R LH + IK G
Sbjct: 607 GYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSG 666
Query: 189 FVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIP 248
+ +++ L++MY C + +A +FD + R+ VSWN
Sbjct: 667 DMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWN----------------------- 703
Query: 249 SKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEG 306
T+I GY Q + +AL + AML +G P++V + ++SAC EG
Sbjct: 704 --------TIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEG 753
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 132/306 (43%), Gaps = 35/306 (11%)
Query: 293 LISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDH 352
++ C EG IH ++K+G + + ++++ YA CG N
Sbjct: 134 MLRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANY------------ 181
Query: 353 IASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVD 412
A ++F + +RDV SW+A+I+G+ + A+ LF M
Sbjct: 182 -------------------ACKVFGEIPERDVVSWTALITGFVAEGYGSGAVNLFCEMRR 222
Query: 413 AGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINT 472
GV+ NE T + A + L+ G+ H + + + +A++D+YAKCG +
Sbjct: 223 EGVEANEFTYATALKACSMCLDLEFGKQVHAEAIKVGDFSDLFVGSALVDLYAKCGEMVL 282
Query: 473 AFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTC 532
A VF + + +VS WNA++ G A GDA L ++ + I + T VL C
Sbjct: 283 AERVFLCM-PKQNAVS-WNALLNGFAQMGDAEKVLNLFCRMTGSEINFSKFTLSTVLKGC 340
Query: 533 CHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVI 592
++G + G+ S+ E D C+VD+ + G DA +V + DVV
Sbjct: 341 ANSGNLRAGQ-IVHSLAIRIGCELDEFISCCLVDMYSKCGLAGDALKVFVRIE-DPDVVS 398
Query: 593 WGTLLA 598
W ++
Sbjct: 399 WSAIIT 404
>gi|225439325|ref|XP_002267596.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Vitis vinifera]
Length = 623
Score = 343 bits (879), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 176/427 (41%), Positives = 255/427 (59%), Gaps = 2/427 (0%)
Query: 236 LVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLIS 295
L++ A +F +I + ++ + MI G+ + +A Y G+ P+++ L+
Sbjct: 68 LIDYASRIFSQIQNPNLFIFNAMIRGHSGSKNPDQAFHFYVQSQRQGLLPDNLTFPFLVK 127
Query: 296 ACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIAS 355
+C + G Q H I+K GF+ ++Q +++H YA G A L F+ + S
Sbjct: 128 SCTKLHCISMGSQAHGHIIKHGFEKDVYVQNSLVHMYATFGDTEAATLIFQRMYYVDVVS 187
Query: 356 WNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGV 415
W ++I GF + G +E AR+LF+ M ++++ +WS MISGYAQN + A+ELF + GV
Sbjct: 188 WTSMIRGFNKCGDVESARKLFDQMPEKNLVTWSTMISGYAQNNHFDKAVELFKVLQSQGV 247
Query: 416 KPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFE 475
+ NE MVSV + A G L+ G AH+YV+ N +TLN L A++DMYA+CGSI+ A
Sbjct: 248 RANETVMVSVISSCAHLGALELGERAHDYVVKNGMTLNLILGTALVDMYARCGSIDKAVW 307
Query: 476 VFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHA 535
VF + +R T W A+I GLAMHG + +LK ++ + + + ITF VLS C H
Sbjct: 308 VFEDLPERDTL--SWTALIAGLAMHGYSERSLKYFATMVEAGLTPRDITFTAVLSACSHG 365
Query: 536 GLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGT 595
GLV+ G + F+SMK + VEP L+HYGCMVDLLGRAG+LE+AE + MP+K + +WG
Sbjct: 366 GLVERGFQIFESMKRDHRVEPRLEHYGCMVDLLGRAGKLEEAERFVLKMPVKPNAPVWGA 425
Query: 596 LLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGM 655
LL A RIH N E+GER K L L P H VLLSNIYA+A WE +R+ M+ G+
Sbjct: 426 LLGACRIHKNAEIGERVGKILIQLLPQHSGYYVLLSNIYANAKEWEKVTEMRQMMKAKGL 485
Query: 656 KRLPGFS 662
K+ PG S
Sbjct: 486 KKPPGHS 492
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 98/367 (26%), Positives = 171/367 (46%), Gaps = 43/367 (11%)
Query: 2 PLDHFHSVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQ 61
P FH SQ+ L + + ++ C+ +S G Q H I K G E + ++Q
Sbjct: 100 PDQAFHFYVQSQRQGLLPDNLTFPFL--VKSCTKLHCISMGSQAHGHIIKHGFEKDVYVQ 157
Query: 62 NSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCV 121
NSL+++YA G A +F +D V+ MI G+ + + AR++FD+ P K V
Sbjct: 158 NSLVHMYATFGDTEAATLIFQRMYYVDVVSWTSMIRGFNKCGDVESARKLFDQMPEKNLV 217
Query: 122 SYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLV 181
++++MI G+AQN+ + +A+E+F+ ++ GV NE + SVISS HLG + H V
Sbjct: 218 TWSTMISGYAQNNHFDKAVELFKVLQSQGVRANETVMVSVISSCAHLGALELGERAHDYV 277
Query: 182 IKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELAR 241
+K + +I+ T L++MY C S+ +A +F+++ ER+ +SW ++ G A G E +
Sbjct: 278 VKNGMTLNLILGTALVDMYARCGSIDKAVWVFEDLPERDTLSWTALIAGLAMHGYSERSL 337
Query: 242 ELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAM 301
+ F TM++ G+ P D+ ++SAC
Sbjct: 338 KYF-----------ATMVEA--------------------GLTPRDITFTAVLSACSHGG 366
Query: 302 AFGEGLQIHSII-----VKAGFDCYDFIQATIIHFYAACGRINLA-RLQFELGIKDHIAS 355
G QI + V+ + Y ++ G++ A R ++ +K +
Sbjct: 367 LVERGFQIFESMKRDHRVEPRLEHY----GCMVDLLGRAGKLEEAERFVLKMPVKPNAPV 422
Query: 356 WNALIAG 362
W AL+
Sbjct: 423 WGALLGA 429
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 98/388 (25%), Positives = 176/388 (45%), Gaps = 33/388 (8%)
Query: 123 YTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVI 182
+ +MI G + + +A + + G++P+ +T ++ S L I HG +I
Sbjct: 87 FNAMIRGHSGSKNPDQAFHFYVQSQRQGLLPDNLTFPFLVKSCTKLHCISMGSQAHGHII 146
Query: 183 KLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARE 242
K + V + +L++MY A +F M ++VSW M+ GF K G VE AR+
Sbjct: 147 KHGFEKDVYVQNSLVHMYATFGDTEAATLIFQRMYYVDVVSWTSMIRGFNKCGDVESARK 206
Query: 243 LFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMA 302
LF+++P K++V+W TMI GY Q +A+ +++ + G+ N+ ++V +IS+C A
Sbjct: 207 LFDQMPEKNLVTWSTMISGYAQNNHFDKAVELFKVLQSQGVRANETVMVSVISSCAHLGA 266
Query: 303 FGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAG 362
G + H +VK G + ++ YA CG I+ A FE + SW ALIAG
Sbjct: 267 LELGERAHDYVVKNGMTLNLILGTALVDMYARCGSIDKAVWVFEDLPERDTLSWTALIAG 326
Query: 363 FIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITM 422
+ GY++ +L+ F MV+AG+ P +IT
Sbjct: 327 L--------------------------AMHGYSER-----SLKYFATMVEAGLTPRDITF 355
Query: 423 VSVFCAIASSGTLKEGRWAHEYV-LNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIR 481
+V A + G ++ G E + ++ + ++D+ + G + A E F
Sbjct: 356 TAVLSACSHGGLVERGFQIFESMKRDHRVEPRLEHYGCMVDLLGRAGKLEEA-ERFVLKM 414
Query: 482 DRTTSVSPWNAIICGLAMHGDANLTLKI 509
+ W A++ +H +A + ++
Sbjct: 415 PVKPNAPVWGALLGACRIHKNAEIGERV 442
>gi|449493040|ref|XP_004159175.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g18840-like [Cucumis sativus]
Length = 1096
Score = 342 bits (878), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 192/603 (31%), Positives = 335/603 (55%), Gaps = 9/603 (1%)
Query: 51 KSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDARE 110
KSG F+ N LI YAK GL++ A+ +FD + + N +I+ Y+++ L AR
Sbjct: 439 KSGFTPTIFMSNQLITFYAKHGLLNDAQKLFDEMPERNVFSWNAIIAAYVKSQNLRQARA 498
Query: 111 VFDKTPIKCCVSYTSMIMGFAQNDCWR-EALEVFRDMRILG--VIPNEVTLASVISSSVH 167
+FD K V+Y SM+ G+A++D ++ +AL F +M+ + +E TL ++++ +
Sbjct: 499 LFDSAVCKDLVTYNSMLSGYARSDGYQGQALGFFMEMQTAPDMIRIDEFTLITMLNLTAK 558
Query: 168 LGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA-RSLFDEMKERNIVSWNV 226
L I + LH ++K D V +++L++MY C EA R + + + VS N
Sbjct: 559 LCVISYGKQLHSFMLKTANDLTVFAASSLIDMYSKCGFFKEACRVYYGCGEVVDSVSRNA 618
Query: 227 MLNGFAKAGLVELARELF-ERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAP 285
M+ + G +++A +LF + + DVV+W TMI G++Q E+L ++ M + +
Sbjct: 619 MVAACCREGEIDVALDLFWKELEQNDVVAWNTMISGFVQNGYEEESLKLFVRMADEKVGW 678
Query: 286 NDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLAR-LQ 344
N+ ++SAC + G ++H+ ++K FI + ++ Y C + A +
Sbjct: 679 NEHTFASVLSACSNLRSLKLGKEVHAYVLKNRLIANPFICSGLVDVYCKCNNMRYAESVN 738
Query: 345 FELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMAL 404
EL +++ + S ++I G+ G + +AR+LF+++ +++ W+A+ GY + +Q
Sbjct: 739 SELRMQN-VYSITSMIVGYSSQGNMAEARKLFDSLDEKNSVVWTALFFGYVKLQQCEAVF 797
Query: 405 ELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMY 464
EL P+ + ++S+ A A L G+ H Y+L I L+ L+++++DMY
Sbjct: 798 ELLSEYRKEAKVPDVLILISIIGACAIQAALVPGKQIHSYMLRAGIKLDTKLTSSLVDMY 857
Query: 465 AKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSIT 524
+KCGSI A +F + D+ + + +N +I G A HG N ++++ ++ K K ++IT
Sbjct: 858 SKCGSIIYAERIFREVTDKDSII--YNIMIAGYAHHGWENEAVQLFKEMVKHGFKPDAIT 915
Query: 525 FIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSM 584
F+ +LS C H GLV+LGE +F SM + YN+ P++ HY CM+DL GRA QL+ A E +R +
Sbjct: 916 FVALLSACRHGGLVELGEHFFDSMSNDYNICPEIDHYACMIDLYGRANQLDKALEFMRKI 975
Query: 585 PMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAF 644
P++ D VIWG L A RI+GN E+ +A L ++ +G V L+N+YA G WE+
Sbjct: 976 PIQLDAVIWGAFLNACRINGNAELARKAEDELLVIEGENGSRYVQLANVYAAEGNWEEMG 1035
Query: 645 SIR 647
IR
Sbjct: 1036 RIR 1038
Score = 182 bits (461), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 139/498 (27%), Positives = 248/498 (49%), Gaps = 43/498 (8%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E L++ L + +S G+Q+HS + K+ + F +SLI++Y+KCG +A ++
Sbjct: 546 EFTLITMLNLTAKLCVISYGKQLHSFMLKTANDLTVFAASSLIDMYSKCGFFKEACRVYY 605
Query: 83 SC-STLDPVACNIMISGYIRNDRLNDAREVFDKTPIKC-CVSYTSMIMGFAQNDCWREAL 140
C +D V+ N M++ R ++ A ++F K + V++ +MI GF QN E+L
Sbjct: 606 GCGEVVDSVSRNAMVAACCREGEIDVALDLFWKELEQNDVVAWNTMISGFVQNGYEEESL 665
Query: 141 EVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMY 200
++F M V NE T ASV+S+ +L + + +H V+K + I + L+++Y
Sbjct: 666 KLFVRMADEKVGWNEHTFASVLSACSNLRSLKLGKEVHAYVLKNRLIANPFICSGLVDVY 725
Query: 201 CVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMID 260
C C+++ A S+ E++ +N+ S M+ G++ G + AR+LF+ + K+ V W +
Sbjct: 726 CKCNNMRYAESVNSELRMQNVYSITSMIVGYSSQGNMAEARKLFDSLDEKNSVVWTALFF 785
Query: 261 GYL---QVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAG 317
GY+ Q E + E L+ YR + P+ ++++ +I AC A G QIHS +++AG
Sbjct: 786 GYVKLQQCEAVFELLSEYRK---EAKVPDVLILISIIGACAIQAALVPGKQIHSYMLRAG 842
Query: 318 FDCYDFIQATIIHFYAACGRINLARLQF-ELGIKDHIASWNALIAGFIRNGMIEDARQLF 376
+ ++++ Y+ CG I A F E+ KD I +N +IAG+ +G
Sbjct: 843 IKLDTKLTSSLVDMYSKCGSIIYAERIFREVTDKDSII-YNIMIAGYAHHG--------- 892
Query: 377 NNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLK 436
W +NE A++LF MV G KP+ IT V++ A G ++
Sbjct: 893 ----------W--------ENE----AVQLFKEMVKHGFKPDAITFVALLSACRHGGLVE 930
Query: 437 EGRWAHEYVLNN-SITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIIC 495
G + + N+ +I + A +ID+Y + ++ A E I + +V W A +
Sbjct: 931 LGEHFFDSMSNDYNICPEIDHYACMIDLYGRANQLDKALEFMRKIPIQLDAVI-WGAFLN 989
Query: 496 GLAMHGDANLTLKIYSDL 513
++G+A L K +L
Sbjct: 990 ACRINGNAELARKAEDEL 1007
>gi|225443714|ref|XP_002265079.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g18840-like [Vitis vinifera]
Length = 536
Score = 342 bits (878), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 181/469 (38%), Positives = 261/469 (55%), Gaps = 35/469 (7%)
Query: 225 NVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIA 284
+V N A+A + A +F RIP+ + W T+I Y ALT++ ML +
Sbjct: 48 SVSTNSHAQA--IPYAHSIFSRIPNPNSYMWNTIIRAYANSPTPEAALTIFHQMLHASVL 105
Query: 285 PNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQ 344
P+ + +CG EG QIH ++K G FIQ T+IH YA+CG I AR
Sbjct: 106 PDKYTFTFALKSCGSFSGVEEGRQIHGHVLKTGLGDDLFIQNTLIHLYASCGCIEDARHL 165
Query: 345 FELGIKDHIASWNAL-------------------------------IAGFIRNGMIEDAR 373
+ ++ + SWNAL I+G++ G++E+AR
Sbjct: 166 LDRMLERDVVSWNALLSAYAERGLMELACHLFDEMTERNVESWNFMISGYVGVGLLEEAR 225
Query: 374 QLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSG 433
++F ++V SW+AMI+GY+ + + L LF M AGVKP+ T+VSV A A G
Sbjct: 226 RVFGETPVKNVVSWNAMITGYSHAGRFSEVLVLFEDMQHAGVKPDNCTLVSVLSACAHVG 285
Query: 434 TLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAI 493
L +G W H Y+ N I+++ ++ A++DMY+KCGSI A EVF + +S WN+I
Sbjct: 286 ALSQGEWVHAYIDKNGISIDGFVATALVDMYSKCGSIEKALEVFNSCLRK--DISTWNSI 343
Query: 494 ICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYN 553
I GL+ HG L+I+S++ K N +TF+ VLS C AGL+D G F M V+
Sbjct: 344 ISGLSTHGSGQHALQIFSEMLVEGFKPNEVTFVCVLSACSRAGLLDEGREMFNLMVHVHG 403
Query: 554 VEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAA 613
++P ++HYGCMVDLLGR G LE+AEE+++ MP K V+W +LL A R HGNVE+ ER A
Sbjct: 404 IQPTIEHYGCMVDLLGRVGLLEEAEELVQKMPQKEASVVWESLLGACRNHGNVELAERVA 463
Query: 614 KSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
+ L L P S V LSN+YA GRW+D +R++MR G+++ PG S
Sbjct: 464 QKLLELSPQESSSFVQLSNMYASMGRWKDVMEVRQKMRAQGVRKDPGCS 512
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 131/516 (25%), Positives = 220/516 (42%), Gaps = 92/516 (17%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
L + ++S+ Q H+ I KSGL +TF + LI A S A++
Sbjct: 11 LSFAEMATSISELHQAHAHILKSGLIHSTFAASRLI---ASVSTNSHAQA---------- 57
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
+ A +F + P + ++I +A + AL +F M
Sbjct: 58 ---------------IPYAHSIFSRIPNPNSYMWNTIIRAYANSPTPEAALTIFHQMLHA 102
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
V+P++ T + S G+ E R +HG V+K + + I L+++Y C + +A
Sbjct: 103 SVLPDKYTFTFALKSCGSFSGVEEGRQIHGHVLKTGLGDDLFIQNTLIHLYASCGCIEDA 162
Query: 210 RSL-------------------------------FDEMKERNIVSWNVMLNGFAKAGLVE 238
R L FDEM ERN+ SWN M++G+ GL+E
Sbjct: 163 RHLLDRMLERDVVSWNALLSAYAERGLMELACHLFDEMTERNVESWNFMISGYVGVGLLE 222
Query: 239 LARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACG 298
AR +F P K+VVSW MI GY R SE L ++ M G+ P++ +V ++SAC
Sbjct: 223 EARRVFGETPVKNVVSWNAMITGYSHAGRFSEVLVLFEDMQHAGVKPDNCTLVSVLSACA 282
Query: 299 RAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNA 358
A +G +H+ I K G F+ ++ Y+ CG I A F ++ I++WN+
Sbjct: 283 HVGALSQGEWVHAYIDKNGISIDGFVATALVDMYSKCGSIEKALEVFNSCLRKDISTWNS 342
Query: 359 LIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPN 418
+I+G +G + A Q+F+ M ++ G+ KPN
Sbjct: 343 IISGLSTHGSGQHALQIFSEM----------LVEGF---------------------KPN 371
Query: 419 EITMVSVFCAIASSGTLKEGRWAHEYVLN-NSITLNDNLSAAIIDMYAKCGSINTAFEVF 477
E+T V V A + +G L EGR +++ + I ++D+ + G + A E+
Sbjct: 372 EVTFVCVLSACSRAGLLDEGREMFNLMVHVHGIQPTIEHYGCMVDLLGRVGLLEEAEELV 431
Query: 478 YHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDL 513
+ + SV W +++ HG+ L ++ L
Sbjct: 432 QKMPQKEASVV-WESLLGACRNHGNVELAERVAQKL 466
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 123/435 (28%), Positives = 201/435 (46%), Gaps = 85/435 (19%)
Query: 29 ALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD------ 82
AL+ C + V +G+QIH + K+GL + FIQN+LI+LYA CG I A+ + D
Sbjct: 114 ALKSCGSFSGVEEGRQIHGHVLKTGLGDDLFIQNTLIHLYASCGCIEDARHLLDRMLERD 173
Query: 83 -------------------SCSTLDPV------ACNIMISGYIRNDRLNDAREVFDKTPI 117
+C D + + N MISGY+ L +AR VF +TP+
Sbjct: 174 VVSWNALLSAYAERGLMELACHLFDEMTERNVESWNFMISGYVGVGLLEEARRVFGETPV 233
Query: 118 KCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRML 177
K VS+ +MI G++ + E L +F DM+ GV P+ TL SV+S+ H+G + + +
Sbjct: 234 KNVVSWNAMITGYSHAGRFSEVLVLFEDMQHAGVKPDNCTLVSVLSACAHVGALSQGEWV 293
Query: 178 HGLVIK--LMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAG 235
H + K + IDGFV +T L++MY C S+ +A +F+ ++I +WN +++G + G
Sbjct: 294 HAYIDKNGISIDGFV--ATALVDMYSKCGSIEKALEVFNSCLRKDISTWNSIISGLSTHG 351
Query: 236 LVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLIS 295
+ AL ++ ML +G PN+V V ++S
Sbjct: 352 SGQ-------------------------------HALQIFSEMLVEGFKPNEVTFVCVLS 380
Query: 296 ACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAAC-----GRINLARLQFEL--- 347
AC RA EG ++ +++V IQ TI H+ C GR+ L EL
Sbjct: 381 ACSRAGLLDEGREMFNLMVHV-----HGIQPTIEHY--GCMVDLLGRVGLLEEAEELVQK 433
Query: 348 -GIKDHIASWNALIAGFIRNGMIEDAR---QLFNNMQKRDVYSWSAMISGYAQNEQPNMA 403
K+ W +L+ +G +E A Q + ++ S+ + + YA +
Sbjct: 434 MPQKEASVVWESLLGACRNHGNVELAERVAQKLLELSPQESSSFVQLSNMYASMGRWKDV 493
Query: 404 LELFHGMVDAGVKPN 418
+E+ M GV+ +
Sbjct: 494 MEVRQKMRAQGVRKD 508
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 132/289 (45%), Gaps = 40/289 (13%)
Query: 26 LVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCS 85
LVS L C+ A+SQG+ +H+ I K+G+ + F+ +L+++Y+KCG I +A +F+SC
Sbjct: 274 LVSVLSACAHVGALSQGEWVHAYIDKNGISIDGFVATALVDMYSKCGSIEKALEVFNSC- 332
Query: 86 TLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRD 145
+R D ++ S+I G + + + AL++F +
Sbjct: 333 --------------LRKD----------------ISTWNSIISGLSTHGSGQHALQIFSE 362
Query: 146 MRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLM-IDGFVIISTNLLNMYCVCS 204
M + G PNEVT V+S+ G + E R + L++ + I + ++++
Sbjct: 363 MLVEGFKPNEVTFVCVLSACSRAGLLDEGREMFNLMVHVHGIQPTIEHYGCMVDLLGRVG 422
Query: 205 SLVEARSLFDEMKERNI-VSWNVMLNGFAKAGLVELARELFER---IPSKDVVSWGTMID 260
L EA L +M ++ V W +L G VELA + ++ + ++ S+ + +
Sbjct: 423 LLEEAEELVQKMPQKEASVVWESLLGACRNHGNVELAERVAQKLLELSPQESSSFVQLSN 482
Query: 261 GYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAF--GEGL 307
Y + R + + + + M G+ + +I G F GEGL
Sbjct: 483 MYASMGRWKDVMEVRQKMRAQGVRKDPG--CSMIEVDGTVYEFLAGEGL 529
>gi|225425100|ref|XP_002272744.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 622
Score = 342 bits (877), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 175/476 (36%), Positives = 274/476 (57%), Gaps = 8/476 (1%)
Query: 193 STNLLNMYCVCSSLVEARSLFDEMKERNIV------SWNVMLNGFAKAGLVELARELFER 246
+ L++ CS++ E R + +M + ++ S + +G + AR +F+R
Sbjct: 18 AAQTLHLLQRCSNMEELRQIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDR 77
Query: 247 IPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEG 306
I + W TMI GY + EAL +Y ML + N L+ AC A E
Sbjct: 78 IFRPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSALEET 137
Query: 307 LQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRN 366
QIH+ I+K GF + ++++ Y+ G I ARL F+ + SWN++I G+ +
Sbjct: 138 QQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYTKC 197
Query: 367 GMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVF 426
G IE A ++FN+M +R++ SW++MISG +P AL LFH M AG+K + + +VS
Sbjct: 198 GEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTL 257
Query: 427 CAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTS 486
A A G L +G+W H Y+ + I ++ L +IDMYAKCG + A EVF + ++ S
Sbjct: 258 QACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVS 317
Query: 487 VSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFK 546
V W A+I G A+HG L+ + ++ ++ N +TF G+L+ C HAGLV + F+
Sbjct: 318 V--WTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLFE 375
Query: 547 SMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNV 606
SM+ ++ +P ++HYGCMVDLLGRAG L++AEE+I +MP+K + IWG LL A IHGN+
Sbjct: 376 SMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNACHIHGNL 435
Query: 607 EVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
E+G++ K L + P HG + L++I+A AG W A +R++M++ G+ +LPG S
Sbjct: 436 ELGKQIGKILIQVDPGHGGRYIHLASIHAAAGEWNQAARVRRQMKEQGVSKLPGCS 491
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 100/403 (24%), Positives = 186/403 (46%), Gaps = 33/403 (8%)
Query: 108 AREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVH 167
AR VFD+ + +MI G++ + EAL ++ M V N T ++ +
Sbjct: 71 ARTVFDRIFRPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSS 130
Query: 168 LGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVM 227
+ + E + +H +IK+ + + +LLN+Y + AR LFD++ +R+ VSWN M
Sbjct: 131 MSALEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSM 190
Query: 228 LNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPND 287
++G+ K G +E+A E+F +P ++++SW +MI G + + EAL ++ M GI ++
Sbjct: 191 IDGYTKCGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDN 250
Query: 288 VMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFEL 347
V +V + AC +G IH+ I K + + +I YA CG + A F
Sbjct: 251 VALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRK 310
Query: 348 GIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELF 407
+ ++ W A+I+G YA + + ALE F
Sbjct: 311 MEEKGVSVWTAMISG-------------------------------YAIHGRGREALEWF 339
Query: 408 HGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLN-NSITLNDNLSAAIIDMYAK 466
M AGV+PN++T + A + +G + E + E + + + ++D+ +
Sbjct: 340 MKMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLFESMERIHGFKPSIEHYGCMVDLLGR 399
Query: 467 CGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKI 509
G + A E+ ++ + + + W A++ +HG+ L +I
Sbjct: 400 AGLLKEAEELIENMPVKPNA-AIWGALLNACHIHGNLELGKQI 441
Score = 138 bits (348), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 98/370 (26%), Positives = 162/370 (43%), Gaps = 72/370 (19%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
L+ CS+ A+ + QQIH+ I K G S + NSL+N+Y+K G I A+ +FD D
Sbjct: 125 LKACSSMSALEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDT 184
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
V+ N MI GY + + A E+F+ P + +S+TSMI G +EAL +F M+
Sbjct: 185 VSWNSMIDGYTKCGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTA 244
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
G+ + V L S + + LG + + + +H + K I+ I+ L++MY C L EA
Sbjct: 245 GIKLDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEA 304
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLS 269
+F +M+E+ + W M++G+A G R
Sbjct: 305 IEVFRKMEEKGVSVWTAMISGYAIHG-------------------------------RGR 333
Query: 270 EALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATII 329
EAL + M G+ PN + +++AC A
Sbjct: 334 EALEWFMKMQTAGVEPNQMTFTGILTACSHA----------------------------- 364
Query: 330 HFYAACGRINLARLQFE-----LGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ-KRD 383
G ++ A+L FE G K I + ++ R G++++A +L NM K +
Sbjct: 365 ------GLVHEAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPN 418
Query: 384 VYSWSAMISG 393
W A+++
Sbjct: 419 AAIWGALLNA 428
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 105/239 (43%), Gaps = 62/239 (25%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+ALVS L+ C+ + QG+ IH+ I K +E + + LI++YAKCG
Sbjct: 251 VALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCG----------- 299
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
L +A EVF K K +T+MI G+A + REALE F
Sbjct: 300 --------------------DLEEAIEVFRKMEEKGVSVWTAMISGYAIHGRGREALEWF 339
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
M+ GV PN++T ++++ H G + E ++L + + I GF
Sbjct: 340 MKMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLFESMER--IHGF-------------- 383
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSK-DVVSWGTMIDG 261
+ +I + M++ +AGL++ A EL E +P K + WG +++
Sbjct: 384 --------------KPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNA 428
>gi|356545843|ref|XP_003541343.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Glycine max]
Length = 747
Score = 342 bits (876), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 195/634 (30%), Positives = 329/634 (51%), Gaps = 34/634 (5%)
Query: 32 YCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVA 91
YC ++IH I K+ F+ N+L++ YAK I+ A+ +FD + +
Sbjct: 18 YCELLKHCRDTKKIHCHIIKAFRNPEIFLLNNLVSAYAKFDRITYARRVFDQMPQRNLYS 77
Query: 92 CNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGV 151
N ++S Y + L + VF P + VS+ S+I +A ++++ + M G
Sbjct: 78 WNTLLSSYSKLACLPEMERVFHAMPTRDMVSWNSLISAYAGRGFLLQSVKAYNLMLYNGP 137
Query: 152 IP-NEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEAR 210
N + L++++ + G + +HG V+K +V + + L++MY + AR
Sbjct: 138 FNLNRIALSTMLILASKQGCVHLGLQVHGHVVKFGFQSYVFVGSPLVDMYSKTGLVFCAR 197
Query: 211 SLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSE 270
FDEM E+N+V +N ++ G + +E +R+LF + KD +SW MI G+ Q E
Sbjct: 198 QAFDEMPEKNVVMYNTLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNGLDRE 257
Query: 271 ALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIH 330
A+ ++R M + + + +++ACG MA EG Q+H+ I++ + F+ + ++
Sbjct: 258 AIDLFREMRLENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNIFVGSALVD 317
Query: 331 FYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAM 390
Y C I + A +F M ++V SW+AM
Sbjct: 318 MYCKCKSI-------------------------------KSAETVFRKMNCKNVVSWTAM 346
Query: 391 ISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSI 450
+ GY QN A+++F M + G++P++ T+ SV + A+ +L+EG H L + +
Sbjct: 347 LVGYGQNGYSEEAVKIFCDMQNNGIEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGL 406
Query: 451 TLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIY 510
+S A++ +Y KCGSI + +F + VS W A++ G A G AN TL+++
Sbjct: 407 ISFITVSNALVTLYGKCGSIEDSHRLFSEM-SYVDEVS-WTALVSGYAQFGKANETLRLF 464
Query: 511 SDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGR 570
+ K + +TFIGVLS C AGLV G + F+SM + + P HY CM+DL R
Sbjct: 465 ESMLAHGFKPDKVTFIGVLSACSRAGLVQKGNQIFESMIKEHRIIPIEDHYTCMIDLFSR 524
Query: 571 AGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLL 630
AG+LE+A + I MP D + W +LL++ R H N+E+G+ AA+SL L+P + S +LL
Sbjct: 525 AGRLEEARKFINKMPFSPDAIGWASLLSSCRFHRNMEIGKWAAESLLKLEPHNTASYILL 584
Query: 631 SNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
S+IYA G+WE+ ++RK MRD G+++ PG S +
Sbjct: 585 SSIYAAKGKWEEVANLRKGMRDKGLRKEPGCSWI 618
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 120/453 (26%), Positives = 216/453 (47%), Gaps = 67/453 (14%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+AL + L S V G Q+H + K G +S F+ + L+++Y+K GL+ A+ FD
Sbjct: 143 IALSTMLILASKQGCVHLGLQVHGHVVKFGFQSYVFVGSPLVDMYSKTGLVFCARQAFDE 202
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
+ V N +I+G +R R+ D+R++F K +S+T+MI GF QN REA+++F
Sbjct: 203 MPEKNVVMYNTLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNGLDREAIDLF 262
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
R+MR+ + ++ T SV+++ + + E + +H +I+ + + + L++MYC C
Sbjct: 263 REMRLENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNIFVGSALVDMYCKC 322
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYL 263
S+ A ++F +M +N+VSW ML G+ + G E
Sbjct: 323 KSIKSAETVFRKMNCKNVVSWTAMLVGYGQNGYSE------------------------- 357
Query: 264 QVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDF 323
EA+ ++ M +GI P+D + +IS+C + EG Q H + +G +
Sbjct: 358 ------EAVKIFCDMQNNGIEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFIT 411
Query: 324 IQATIIHFYAACGRI-NLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKR 382
+ ++ Y CG I + RL E+ D + SW AL++G
Sbjct: 412 VSNALVTLYGKCGSIEDSHRLFSEMSYVDEV-SWTALVSG-------------------- 450
Query: 383 DVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAH 442
YAQ + N L LF M+ G KP+++T + V A + +G +++G
Sbjct: 451 -----------YAQFGKANETLRLFESMLAHGFKPDKVTFIGVLSACSRAGLVQKGNQIF 499
Query: 443 EYVLNNS--ITLNDNLSAAIIDMYAKCGSINTA 473
E ++ I + D+ + +ID++++ G + A
Sbjct: 500 ESMIKEHRIIPIEDHYT-CMIDLFSRAGRLEEA 531
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 100/254 (39%), Gaps = 77/254 (30%)
Query: 16 NLQNSDYE---LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCG 72
++QN+ E L S + C+ ++ +G Q H SGL S + N+L+ LY KCG
Sbjct: 365 DMQNNGIEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALVTLYGKCG 424
Query: 73 LISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQ 132
I + +F S +D V+ ++SGY + + N
Sbjct: 425 SIEDSHRLFSEMSYVDEVSWTALVSGYAQFGKAN-------------------------- 458
Query: 133 NDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVII 192
E L +F M G P++VT V+S+
Sbjct: 459 -----ETLRLFESMLAHGFKPDKVTFIGVLSA---------------------------- 485
Query: 193 STNLLNMYCVCSSLVE-ARSLFDEM-KERNIVS----WNVMLNGFAKAGLVELARELFER 246
C + LV+ +F+ M KE I+ + M++ F++AG +E AR+ +
Sbjct: 486 --------CSRAGLVQKGNQIFESMIKEHRIIPIEDHYTCMIDLFSRAGRLEEARKFINK 537
Query: 247 IP-SKDVVSWGTMI 259
+P S D + W +++
Sbjct: 538 MPFSPDAIGWASLL 551
>gi|359477376|ref|XP_002280144.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 642
Score = 342 bits (876), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 204/633 (32%), Positives = 342/633 (54%), Gaps = 62/633 (9%)
Query: 43 QQIHS-LIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIR 101
+ IH+ L+ +S + S+ F+ N L+ LY++ G A +FD + + Y+
Sbjct: 19 KSIHARLLIESSVASSEFVINKLLRLYSRFGATDYAHKVFDEITQPN---------AYL- 68
Query: 102 NDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASV 161
+TS+I G+ +N + EA +F MR + T++SV
Sbjct: 69 ---------------------WTSLIHGYVENRQYDEAFSLFIQMRREPISVLNFTISSV 107
Query: 162 ISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNI 221
+ + L + ++G V+K +I+ ++L+++ C + AR FDEM E++I
Sbjct: 108 LKALARLTRFKGGQAVYGFVLKYGFAFDLIVQNSVLDLFMRCRKVDTARQAFDEMCEKDI 167
Query: 222 VSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCD 281
VSWN+M++G+ V++AR+ F+R+P ++VVSW +MI GY++ ++EA ++ +M
Sbjct: 168 VSWNMMISGYGNNDRVDIARKFFDRMPERNVVSWTSMICGYVKAGDMAEAQVLFDSMPVK 227
Query: 282 GIAPNDVMI---VDLISACGRAMAFGEGLQIHSI----IVKAGFDCYDFIQATIIHFYAA 334
+A +VM+ +D+ + FG+ + IH I+ +GF
Sbjct: 228 DLASWNVMVSGYMDIGDCVNARIIFGK-MPIHDTGSWNIMISGF--------------CK 272
Query: 335 CGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGY 394
G + A+ F+ ++ SW ++ G+I+NG AR LF+ M +++ +WS MI GY
Sbjct: 273 AGELESAKDFFDRMPNKNVISWGIMLDGYIKNGDTNGARCLFDQMPMKNLVTWSTMIGGY 332
Query: 395 AQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGR-WAHEYVLNNSITLN 453
A+N QP ALELF + +KP+E ++ + A + G + H YV S+ +
Sbjct: 333 ARNGQPLKALELFERFKEQDIKPDETFILGIISACSQLGIIDAAESIIHNYV-GPSLLSD 391
Query: 454 DNLSAAIIDMYAKCGSINTAFEVFY--HIRDRTTSVSPWNAIICGLAMHGDANLTLKIYS 511
+ ++IDMYAKCGSI A ++F H +D ++ +I LA HG + ++
Sbjct: 392 LRVFTSLIDMYAKCGSIEKALQMFEMAHPKDLLC----YSTMIAALANHGLGRDAIFLFD 447
Query: 512 DLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRA 571
+++ NIK +S+TF+GVL+ C H GLVD G +YFK M + ++P KHY C+VDLLGR
Sbjct: 448 KMQRANIKPDSVTFLGVLTACNHGGLVDEGRKYFKQMTEEFGIQPSEKHYACVVDLLGRV 507
Query: 572 GQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLS 631
G LE+A +IR+MP+ V+WG LLAA R+H NV++ E AA L ++P + + +LLS
Sbjct: 508 GCLEEAYNLIRNMPIAPHSVVWGALLAACRVHCNVQLAEVAAAELFKIEPDNSGNYILLS 567
Query: 632 NIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
NIYA AGRW +R ++R+ +++ G S +
Sbjct: 568 NIYAAAGRWGSVAKVRAKIREHRVRKNRGSSWI 600
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 130/477 (27%), Positives = 223/477 (46%), Gaps = 63/477 (13%)
Query: 42 GQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIR 101
GQ ++ + K G + +QNS+++L+ +C + A+ FD D V+ N+MISGY
Sbjct: 120 GQAVYGFVLKYGFAFDLIVQNSVLDLFMRCRKVDTARQAFDEMCEKDIVSWNMMISGYGN 179
Query: 102 NDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASV 161
NDR++ AR+ FD+ P + VS+TSMI G+ + EA +F M + + V +
Sbjct: 180 NDRVDIARKFFDRMPERNVVSWTSMICGYVKAGDMAEAQVLFDSMPVKDLASWNV----M 235
Query: 162 ISSSVHLGGIWECRMLHGLVI-------KLMIDGFVIISTNLLNMYCVCSSLVEARSLFD 214
+S + +G R++ G + +MI GF C L A+ FD
Sbjct: 236 VSGYMDIGDCVNARIIFGKMPIHDTGSWNIMISGF-----------CKAGELESAKDFFD 284
Query: 215 EMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTM 274
M +N++SW +ML+G+ K G AR LF+++P K++V+W TMI GY + + +AL +
Sbjct: 285 RMPNKNVISWGIMLDGYIKNGDTNGARCLFDQMPMKNLVTWSTMIGGYARNGQPLKALEL 344
Query: 275 YRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAA 334
+ I P++ I+ +ISAC + II A +IIH Y
Sbjct: 345 FERFKEQDIKPDETFILGIISACSQL----------GIIDAA---------ESIIHNYVG 385
Query: 335 CGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGY 394
++ R+ + +LI + + G IE A Q+F +D+ +S MI+
Sbjct: 386 PSLLSDLRV------------FTSLIDMYAKCGSIEKALQMFEMAHPKDLLCYSTMIAAL 433
Query: 395 AQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGR-WAHEYVLNNSITLN 453
A + A+ LF M A +KP+ +T + V A G + EGR + + I +
Sbjct: 434 ANHGLGRDAIFLFDKMQRANIKPDSVTFLGVLTACNHGGLVDEGRKYFKQMTEEFGIQPS 493
Query: 454 DNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSP----WNAIICGLAMHGDANLT 506
+ A ++D+ + G + A+ + R ++P W A++ +H + L
Sbjct: 494 EKHYACVVDLLGRVGCLEEAYNLI-----RNMPIAPHSVVWGALLAACRVHCNVQLA 545
>gi|224138230|ref|XP_002322762.1| predicted protein [Populus trichocarpa]
gi|222867392|gb|EEF04523.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 342 bits (876), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 177/474 (37%), Positives = 278/474 (58%), Gaps = 8/474 (1%)
Query: 189 FVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIP 248
F+ T L ++ + + L+ A ++FD ++S ++ N L++ A ++F +I
Sbjct: 21 FLESCTTLSHLKIIHAHLIRAHTIFDVFAASCLISISINKN------LLDYAAQVFYQIQ 74
Query: 249 SKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQ 308
+ ++ + + I G+ + ++ Y +G+ P+++ L+ AC + + G+Q
Sbjct: 75 NPNLFIYNSFIRGFSGSKDPDKSFHFYVQSKRNGLVPDNLTYPFLVKACTQKGSLDMGIQ 134
Query: 309 IHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGM 368
H I++ GFD ++Q +++ Y+ G I A F + SW +++AG+I++G
Sbjct: 135 AHGQIIRHGFDSDVYVQNSLVTMYSTLGDIKSASYVFRRISCLDVVSWTSMVAGYIKSGD 194
Query: 369 IEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCA 428
+ AR+LF+ M ++++ +WS MISGYA+N + A+EL+ + GV NE MVSV +
Sbjct: 195 VTSARKLFDKMPEKNLVTWSVMISGYAKNSFFDKAIELYFLLQSEGVHANETVMVSVIAS 254
Query: 429 IASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVS 488
A G L+ G AH+Y+L N +T+N L A++DMYA+CGSI+ A VF + R
Sbjct: 255 CAHLGALELGERAHDYILRNKMTVNLILGTALVDMYARCGSIDKAIWVFDQLPGR--DAL 312
Query: 489 PWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSM 548
W +I G AMHG A L+ +S +EK + ITF VLS C H GLV+ G F+SM
Sbjct: 313 SWTTLIAGFAMHGYAEKALEYFSRMEKAGLTPREITFTAVLSACSHGGLVERGLELFESM 372
Query: 549 KSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEV 608
K Y +EP L+HYGCMVDLLGRAG+L +AE+ + MPMK + IWG LL A RIH N E+
Sbjct: 373 KRDYRIEPRLEHYGCMVDLLGRAGKLAEAEKFVNEMPMKPNAPIWGALLGACRIHKNSEI 432
Query: 609 GERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
ERA K+L L+P H VLLSNIYA +WE+ +IR+ M++ G+ + PG++
Sbjct: 433 AERAGKTLIELKPEHSGYYVLLSNIYARTNKWENVENIRQMMKERGVVKPPGYT 486
Score = 145 bits (365), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 151/308 (49%), Gaps = 33/308 (10%)
Query: 2 PLDHFHSVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQ 61
P FH S++ L + + ++ C+ ++ G Q H I + G +S+ ++Q
Sbjct: 94 PDKSFHFYVQSKRNGLVPDNLTYPFL--VKACTQKGSLDMGIQAHGQIIRHGFDSDVYVQ 151
Query: 62 NSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCV 121
NSL+ +Y+ G I A +F S LD V+ M++GYI++ + AR++FDK P K V
Sbjct: 152 NSLVTMYSTLGDIKSASYVFRRISCLDVVSWTSMVAGYIKSGDVTSARKLFDKMPEKNLV 211
Query: 122 SYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLV 181
+++ MI G+A+N + +A+E++ ++ GV NE + SVI+S HLG + H +
Sbjct: 212 TWSVMISGYAKNSFFDKAIELYFLLQSEGVHANETVMVSVIASCAHLGALELGERAHDYI 271
Query: 182 IKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELAR 241
++ + +I+ T L++MY C S+ +A +FD++ R+ +SW ++ GFA G E A
Sbjct: 272 LRNKMTVNLILGTALVDMYARCGSIDKAIWVFDQLPGRDALSWTTLIAGFAMHGYAEKAL 331
Query: 242 ELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAM 301
E F R+ G+ P ++ ++SAC
Sbjct: 332 EYFSRMEKA-------------------------------GLTPREITFTAVLSACSHGG 360
Query: 302 AFGEGLQI 309
GL++
Sbjct: 361 LVERGLEL 368
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 103/451 (22%), Positives = 196/451 (43%), Gaps = 37/451 (8%)
Query: 60 IQNSLINLYAKCGLISQAK----SMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKT 115
++N ++ C +S K + + + D A + +IS I + L+ A +VF +
Sbjct: 14 LKNPKLSFLESCTTLSHLKIIHAHLIRAHTIFDVFAASCLISISINKNLLDYAAQVFYQI 73
Query: 116 PIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECR 175
Y S I GF+ + ++ + + G++P+ +T ++ + G +
Sbjct: 74 QNPNLFIYNSFIRGFSGSKDPDKSFHFYVQSKRNGLVPDNLTYPFLVKACTQKGSLDMGI 133
Query: 176 MLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAG 235
HG +I+ D V + +L+ MY + A +F + ++VSW M+ G+ K+G
Sbjct: 134 QAHGQIIRHGFDSDVYVQNSLVTMYSTLGDIKSASYVFRRISCLDVVSWTSMVAGYIKSG 193
Query: 236 LVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLIS 295
V AR+LF+++P K++V+W MI GY + +A+ +Y + +G+ N+ ++V +I+
Sbjct: 194 DVTSARKLFDKMPEKNLVTWSVMISGYAKNSFFDKAIELYFLLQSEGVHANETVMVSVIA 253
Query: 296 ACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIAS 355
+C A G + H I++ + ++ YA CG I+ A F+ S
Sbjct: 254 SCAHLGALELGERAHDYILRNKMTVNLILGTALVDMYARCGSIDKAIWVFDQLPGRDALS 313
Query: 356 WNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGV 415
W LIAGF +G E A + F+ M+K AG+
Sbjct: 314 WTTLIAGFAMHGYAEKALEYFSRMEK-------------------------------AGL 342
Query: 416 KPNEITMVSVFCAIASSGTLKEGRWAHEYVLNN-SITLNDNLSAAIIDMYAKCGSINTAF 474
P EIT +V A + G ++ G E + + I ++D+ + G + A
Sbjct: 343 TPREITFTAVLSACSHGGLVERGLELFESMKRDYRIEPRLEHYGCMVDLLGRAGKLAEA- 401
Query: 475 EVFYHIRDRTTSVSPWNAIICGLAMHGDANL 505
E F + + W A++ +H ++ +
Sbjct: 402 EKFVNEMPMKPNAPIWGALLGACRIHKNSEI 432
>gi|224114351|ref|XP_002332376.1| predicted protein [Populus trichocarpa]
gi|222832200|gb|EEE70677.1| predicted protein [Populus trichocarpa]
Length = 660
Score = 342 bits (876), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 200/627 (31%), Positives = 320/627 (51%), Gaps = 97/627 (15%)
Query: 39 VSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISG 98
+SQ +QIH+ + ++GL + F + ++ C++ SG
Sbjct: 1 MSQLKQIHAQMLRTGLFFDPFTASKIVAF------------------------CSLQESG 36
Query: 99 YIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTL 158
++ RL VF + P + S+I G + +EAL +++M + G+IP+ T
Sbjct: 37 SLQYARL-----VFSQIPNPTSYTCNSIIRGCTDKNLHQEALLFYQEMMVQGLIPDRYTF 91
Query: 159 ASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKE 218
S+ S + E + +H KL L+NMY C LV A
Sbjct: 92 PSLFKSCRNSS---EGKQIHCHSTKLGFASDTYAQNTLMNMYSNCGCLVSA--------- 139
Query: 219 RNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMY-RA 277
R++F+++ K VVSW TMI + Q ++ +EA+ ++ R
Sbjct: 140 ----------------------RKVFDKMEDKTVVSWATMIGVHAQWDQPNEAVRLFDRM 177
Query: 278 MLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGR 337
M + + PN+V +V++++AC RA +IH I + GF + + ++ Y CG
Sbjct: 178 MKSENVKPNEVTLVNVLTACARARDLAMVKRIHEYIDEHGFGRHVVLNTVLMDVYCKCGC 237
Query: 338 INLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQN 397
+ LA R LF+ Q+++++SW+ MI+G+ ++
Sbjct: 238 VQLA-------------------------------RDLFDKAQEKNLFSWNIMINGHVED 266
Query: 398 EQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLS 457
AL LF M G+K +++TM S+ A G L+ G+W H Y+ I ++ L
Sbjct: 267 SNYEEALLLFREMQTKGIKGDKVTMASLLLACTHLGALELGKWLHAYIKKQRIDVDVALG 326
Query: 458 AAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRN 517
A++DMYAKCGSI TA +VF+ + ++ V W A+I GLAM G A L+ + ++ +
Sbjct: 327 TALVDMYAKCGSIETAIQVFHEMPEK--DVMTWTALILGLAMCGQAENALQYFDEMHIKG 384
Query: 518 IKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDA 577
+K ++ITF+GVL+ C HAG VD G +F SM Y ++P ++HYG +VD+LGRAG++ +A
Sbjct: 385 VKPDAITFVGVLAACSHAGFVDEGISHFNSMSDTYGIQPTIEHYGGLVDILGRAGRIAEA 444
Query: 578 EEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADA 637
EE+I+SMPM D + G LL A RIHGN+E ERAAK L + P H + VLLSNIY +
Sbjct: 445 EELIKSMPMAPDQFVLGGLLGACRIHGNLEAAERAAKQLLEIDPYHSGTYVLLSNIYKSS 504
Query: 638 GRWEDAFSIRKEMRDCGMKRLPGFSGV 664
+WE+A R+ M + GM++ PG S +
Sbjct: 505 KKWEEAKRTRELMAERGMRKPPGCSQI 531
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 137/309 (44%), Gaps = 67/309 (21%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E+ LV+ L C+ ++ ++IH I + G + + L+++Y KCG + A+ +FD
Sbjct: 187 EVTLVNVLTACARARDLAMVKRIHEYIDEHGFGRHVVLNTVLMDVYCKCGCVQLARDLFD 246
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+ + NIMI+G++ + + EAL +
Sbjct: 247 KAQEKNLFSWNIMINGHVEDSN-------------------------------YEEALLL 275
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
FR+M+ G+ ++VT+AS++ + HLG + + LH + K ID V + T L++MY
Sbjct: 276 FREMQTKGIKGDKVTMASLLLACTHLGALELGKWLHAYIKKQRIDVDVALGTALVDMYAK 335
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
C S+ A +F EM E+++++W ++ G A G E A + F+ + K
Sbjct: 336 CGSIETAIQVFHEMPEKDVMTWTALILGLAMCGQAENALQYFDEMHIK------------ 383
Query: 263 LQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD 322
G+ P+ + V +++AC A EG+ + + D Y
Sbjct: 384 -------------------GVKPDAITFVGVLAACSHAGFVDEGISHFNSMS----DTYG 420
Query: 323 FIQATIIHF 331
IQ TI H+
Sbjct: 421 -IQPTIEHY 428
>gi|357138408|ref|XP_003570784.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Brachypodium distachyon]
Length = 750
Score = 342 bits (876), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 197/625 (31%), Positives = 327/625 (52%), Gaps = 44/625 (7%)
Query: 45 IHSLIFKS-GLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRND 103
+H+LI ++ S T++ N+L+ YA GL+ A+ +FD+ + V N ++S R
Sbjct: 32 VHALILRTLPHPSPTYLLNTLLTAYASSGLLPHARRVFDAMPGRNLVTGNSLLSALARAG 91
Query: 104 RLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREA----LEVFRDMRILGVIPNEVTLA 159
+ D +F P + VSY +++ GF++ A + + RD GV P+ +T++
Sbjct: 92 LVRDMERLFTSLPQRDAVSYNALLAGFSRAGAHARAAGAYVALLRDE--AGVRPSRITMS 149
Query: 160 SVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKER 219
V+ + LG R +H +++L + + L++MY + +AR +FDEM+ +
Sbjct: 150 GVVMVASALGDRALGRQVHCQILRLGFGAYAFTGSPLVDMYAKVGPIGDARRVFDEMEGK 209
Query: 220 NIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAML 279
N+V N M+ G + +V AR LFE I +D ++W TM+ G Q SEAL ++R M
Sbjct: 210 NVVMCNTMITGLLRCKMVAEARALFEAIEERDSITWTTMVTGLTQNGLESEALDVFRRMR 269
Query: 280 CDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRIN 339
+G+ + +++ACG A EG QIH+ I + ++ F+ + ++ Y+ C +
Sbjct: 270 AEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTCYEDNVFVGSALVDMYSKCRSVR 329
Query: 340 LARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQ 399
LA +F M +++ SW+AMI GY QN
Sbjct: 330 LAE-------------------------------AVFRRMMWKNIISWTAMIVGYGQNGC 358
Query: 400 PNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAA 459
A+ +F M G+KP++ T+ SV + A+ +L+EG H L + + +S A
Sbjct: 359 GEEAVRVFSEMQRDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLRPYVTVSNA 418
Query: 460 IIDMYAKCGSINTAFEVFYHI--RDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRN 517
++ +Y KCGSI A +F + D+ + W A++ G A G A T+ ++ + +
Sbjct: 419 LVTLYGKCGSIEDAHRLFDEMSFHDQVS----WTALVMGYAQFGKAKETIDLFEKMLSKG 474
Query: 518 IKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDA 577
+K + +TFIGVLS C +GLVD G YF SM+ +++ P HY CM+DL R+G L+ A
Sbjct: 475 VKPDGVTFIGVLSACSRSGLVDKGRSYFHSMQQDHDIVPLDDHYTCMIDLYSRSGWLKQA 534
Query: 578 EEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADA 637
EE I+ MP D W TLL+A R+ G++E+G+ AA++L L P + S VLL +++A
Sbjct: 535 EEFIKQMPRCPDAFGWATLLSACRLRGDMEIGKWAAENLLKLDPQNPASYVLLCSMHASK 594
Query: 638 GRWEDAFSIRKEMRDCGMKRLPGFS 662
G W D +R+ MRD +K+ PG S
Sbjct: 595 GEWNDVAKLRRGMRDRQVKKEPGCS 619
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 106/395 (26%), Positives = 175/395 (44%), Gaps = 69/395 (17%)
Query: 28 SALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTL 87
S L C A A+ +G+QIH+ I ++ E N F+ ++L+++Y+KC
Sbjct: 282 SILTACGALAALEEGKQIHAYITRTCYEDNVFVGSALVDMYSKC---------------- 325
Query: 88 DPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMR 147
R+ RL +A VF + K +S+T+MI+G+ QN C EA+ VF +M+
Sbjct: 326 -------------RSVRLAEA--VFRRMMWKNIISWTAMIVGYGQNGCGEEAVRVFSEMQ 370
Query: 148 ILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLV 207
G+ P++ TL SVISS +L + E H L + + +V +S L+ +Y C S+
Sbjct: 371 RDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLRPYVTVSNALVTLYGKCGSIE 430
Query: 208 EARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVER 267
+A LFDEM + VSW ++ G+A+ G + +LFE+
Sbjct: 431 DAHRLFDEMSFHDQVSWTALVMGYAQFGKAKETIDLFEK--------------------- 469
Query: 268 LSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQ-IHSIIVKAGFDCYDFIQA 326
ML G+ P+ V + ++SAC R+ +G HS+ D
Sbjct: 470 ----------MLSKGVKPDGVTFIGVLSACSRSGLVDKGRSYFHSMQQDHDIVPLDDHYT 519
Query: 327 TIIHFYAACGRINLARLQF--ELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDV 384
+I Y+ G + A +F ++ W L++ G +E + N+ K D
Sbjct: 520 CMIDLYSRSGWLKQAE-EFIKQMPRCPDAFGWATLLSACRLRGDMEIGKWAAENLLKLDP 578
Query: 385 Y---SWSAMISGYAQNEQPNMALELFHGMVDAGVK 416
S+ + S +A + N +L GM D VK
Sbjct: 579 QNPASYVLLCSMHASKGEWNDVAKLRRGMRDRQVK 613
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 100/254 (39%), Gaps = 76/254 (29%)
Query: 13 QKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCG 72
Q+ ++ D+ L S + C+ ++ +G Q H L SGL + N+L+ LY KCG
Sbjct: 370 QRDGIKPDDFTLG--SVISSCANLASLEEGAQFHCLALVSGLRPYVTVSNALVTLYGKCG 427
Query: 73 LISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQ 132
I A +FD S D V+ ++ MG+AQ
Sbjct: 428 SIEDAHRLFDEMSFHDQVSWTALV-------------------------------MGYAQ 456
Query: 133 NDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVII 192
+E +++F M GV P+ VT V+S+
Sbjct: 457 FGKAKETIDLFEKMLSKGVKPDGVTFIGVLSA---------------------------- 488
Query: 193 STNLLNMYCVCSSLVE-ARSLFDEMKE-RNIVS----WNVMLNGFAKAGLVELARELFER 246
C S LV+ RS F M++ +IV + M++ ++++G ++ A E ++
Sbjct: 489 --------CSRSGLVDKGRSYFHSMQQDHDIVPLDDHYTCMIDLYSRSGWLKQAEEFIKQ 540
Query: 247 IPS-KDVVSWGTMI 259
+P D W T++
Sbjct: 541 MPRCPDAFGWATLL 554
>gi|359475162|ref|XP_003631603.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g18840-like [Vitis vinifera]
Length = 670
Score = 341 bits (875), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 200/635 (31%), Positives = 342/635 (53%), Gaps = 13/635 (2%)
Query: 38 AVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMIS 97
++ G + H+ K+G+ S F N LI+LY+K G +++A +FD + N +I
Sbjct: 3 SIKDGFRFHAHAIKNGITSTVFTSNQLIHLYSKHGFLAEAHKLFDEMPERNVFTWNAIIW 62
Query: 98 GYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWR-EALEVFRDMRILG--VIPN 154
YI+ L ARE+FD P K V+Y SM+ G+ D + AL++F +M+ L +
Sbjct: 63 AYIKTQNLKQARELFDSAPSKDLVTYNSMLSGYINTDGYETNALKLFIEMQSLNDETRID 122
Query: 155 EVTLASVISSSVHLGGIWECRMLHGLVIKLM--IDGFVIISTNLLNMYCVCSSLVEARSL 212
E +L +++ S L + LH ++K I GF + ++L++MY C E +
Sbjct: 123 EFSLTRMLNLSAKLSMESYGKQLHSYMVKTANNISGFAV--SSLIDMYSKCGCFREVCQV 180
Query: 213 FDEMKE-RNIVSWNVMLNGFAKAGLVELARELFER-IPSKDVVSWGTMIDGYLQVERLSE 270
FD ++VS N M+ + G +E+ LF R + DVVSW T+I GY+Q +
Sbjct: 181 FDGCAGVLDLVSKNAMVAACCREGELEMGVNLFWRDLELNDVVSWNTLISGYVQNGCEED 240
Query: 271 ALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIH 330
AL ++ M + + N+ I L+SAC + G ++H ++K FI + ++
Sbjct: 241 ALKLFVHMEENEVRWNEHTIAGLLSACAGLRSLKLGKEVHGWVLKYELGFNPFISSGLVD 300
Query: 331 FYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAM 390
Y CG + A L + + S ++I G G + +AR+LF+++ ++ W+A+
Sbjct: 301 VYCKCGNMKYAELVYATIGTGNAFSITSMIVGHSSQGNMGEARRLFDSLTEKSSIIWTAL 360
Query: 391 ISGYAQNEQPNMALELFHGM-VDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNS 449
+GY +++Q EL V + P+ + ++SV A A L G+ H YVL
Sbjct: 361 FTGYVKSQQCEAVFELLSEFRVKEAMVPDALILISVLGACAIQAALNPGKQIHAYVLRIG 420
Query: 450 ITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKI 509
I L++ L +A++DMY+K G+I A ++F + +R + +N + G A HG N ++
Sbjct: 421 IELDEKLVSAMVDMYSKSGNIKYAEKIFQRVTNRDAVI--YNIMTAGYAHHGHENQAIQQ 478
Query: 510 YSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLG 569
+ ++ +R ++ +++TF+ +LS C H GLV+LGE+YF SM YN+ P++ HY CM+DL G
Sbjct: 479 FEEMLERGVRPDAVTFVALLSACRHCGLVELGEKYFASMTD-YNILPEIDHYACMIDLYG 537
Query: 570 RAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVL 629
RA QLE A ++ +P++ D VI G L A RI+ N ++ A + + ++ +G V
Sbjct: 538 RANQLEKAVAFMKRIPIEPDAVILGAFLNACRINRNTKLAREAEEKILRIEGDNGARYVQ 597
Query: 630 LSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
L+N+YA G+W + IR++MR+ +K+ G S V
Sbjct: 598 LANVYAAEGKWVEMGRIRRKMRENEIKKFAGCSWV 632
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 115/466 (24%), Positives = 221/466 (47%), Gaps = 38/466 (8%)
Query: 13 QKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCG 72
Q N + E +L L + S G+Q+HS + K+ + F +SLI++Y+KCG
Sbjct: 113 QSLNDETRIDEFSLTRMLNLSAKLSMESYGKQLHSYMVKTANNISGFAVSSLIDMYSKCG 172
Query: 73 LISQAKSMFDSCS-TLDPVACNIMISGYIRNDRLNDAREVFDKT-PIKCCVSYTSMIMGF 130
+ +FD C+ LD V+ N M++ R L +F + + VS+ ++I G+
Sbjct: 173 CFREVCQVFDGCAGVLDLVSKNAMVAACCREGELEMGVNLFWRDLELNDVVSWNTLISGY 232
Query: 131 AQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFV 190
QN C +AL++F M V NE T+A ++S+ L + + +HG V+K +
Sbjct: 233 VQNGCEEDALKLFVHMEENEVRWNEHTIAGLLSACAGLRSLKLGKEVHGWVLKYELGFNP 292
Query: 191 IISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSK 250
IS+ L+++YC C ++ A ++ + N S M+ G + G + AR LF+ + K
Sbjct: 293 FISSGLVDVYCKCGNMKYAELVYATIGTGNAFSITSMIVGHSSQGNMGEARRLFDSLTEK 352
Query: 251 DVVSWGTMIDGYL---QVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGL 307
+ W + GY+ Q E + E L+ +R + + P+ ++++ ++ AC A G
Sbjct: 353 SSIIWTALFTGYVKSQQCEAVFELLSEFRVK--EAMVPDALILISVLGACAIQAALNPGK 410
Query: 308 QIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNG 367
QIH+ +++ G + + + + ++ Y+ ++G
Sbjct: 411 QIHAYVLRIGIELDEKLVSAMVDMYS-------------------------------KSG 439
Query: 368 MIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFC 427
I+ A ++F + RD ++ M +GYA + N A++ F M++ GV+P+ +T V++
Sbjct: 440 NIKYAEKIFQRVTNRDAVIYNIMTAGYAHHGHENQAIQQFEEMLERGVRPDAVTFVALLS 499
Query: 428 AIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTA 473
A G ++ G + + +I + A +ID+Y + + A
Sbjct: 500 ACRHCGLVELGEKYFASMTDYNILPEIDHYACMIDLYGRANQLEKA 545
>gi|297743088|emb|CBI35955.3| unnamed protein product [Vitis vinifera]
Length = 708
Score = 341 bits (875), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 212/650 (32%), Positives = 334/650 (51%), Gaps = 55/650 (8%)
Query: 30 LRYCS-AHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLD 88
L+ CS +H++ QQIHS I +G + F+ ++++YA GL+S
Sbjct: 41 LQQCSKSHLS----QQIHSQIIVTGSHRSAFLAARVVSVYAGFGLVS------------- 83
Query: 89 PVACNIMISGYIRNDRLNDAREVFDKTPIKC---CVSYTSMIMGFAQNDCWREALEVFRD 145
DA+ VF+ +PI+C + + S++ + EALE++
Sbjct: 84 ------------------DAQRVFEVSPIECFSNLLLWNSILRANVAHGYCEEALEIYCR 125
Query: 146 MRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSS 205
MR LGV + T VI + +G CR +HG V+++ + + L+ MY
Sbjct: 126 MRKLGVSADGFTFPLVIRACALMGSRKLCRSVHGHVVEMGFQWNLHVGNELMGMYGKIGR 185
Query: 206 LVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPS----KDVVSWGTMIDG 261
+ +AR +F+ M R+ VSWN M++G+A A E+F + S ++V+W +++
Sbjct: 186 MDDARKVFERMAVRSCVSWNTMVSGYALNYDCHGASEMFRMMGSAGLEPNLVTWTSLLSS 245
Query: 262 YLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCY 321
+ + + E + ++ M GI + ++S AF EG IH +VK GF+ Y
Sbjct: 246 HARCGQHVETMELFGRMRMRGIGATAEALAVVLSVSVDLAAFDEGKVIHGYVVKGGFENY 305
Query: 322 DFIQATIIHFYAACGRINLARLQF-ELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ 380
F++ ++I Y G +N AR+ F E+ K+ I SWNALI+ + G ++A +F ++
Sbjct: 306 LFVKNSLICLYGKHGNVNAARILFLEIKTKN-IVSWNALISSYADLGWCDEAFAIFLQLE 364
Query: 381 KRDVY--------SWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASS 432
K D Y SWSA+I G+A Q ALELF M A VK N +T+ SV A
Sbjct: 365 KTDEYPMVRPNVVSWSAVIGGFASKGQGEEALELFRRMQLAKVKANSVTIASVLSVCAEL 424
Query: 433 GTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNA 492
L GR H +V+ + + N + +I+MY K GS VF I ++ + WN
Sbjct: 425 AALHLGREIHGHVVRSLMDGNILVGNGLINMYTKSGSFKEGNLVFEKIENK--DLISWNT 482
Query: 493 IICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVY 552
++ G +HG ++ + + K + + +TF+ VLS C HAGLV G F M +
Sbjct: 483 MVAGYGIHGLGENAIRTFDQMIKDGFEPDGVTFVAVLSACSHAGLVAEGRELFDKMIKEF 542
Query: 553 NVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERA 612
VEP ++HY CMVDLLGRAG L++A +V++SMP++ + +WG LL + R+H N EV E
Sbjct: 543 RVEPQMEHYACMVDLLGRAGLLQEASKVVKSMPVEPNACVWGALLNSCRMHKNTEVAEET 602
Query: 613 AKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
A + L S +LLSNIYA +GRWED+ +R + G+K+ PG S
Sbjct: 603 ASQIFNLNSEIAGSYMLLSNIYAASGRWEDSAKVRISAKTKGLKKTPGQS 652
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 92/226 (40%), Gaps = 33/226 (14%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+ + S L C+ A+ G++IH + +S ++ N + N LIN+Y K G + +F+
Sbjct: 412 VTIASVLSVCAELAALHLGREIHGHVVRSLMDGNILVGNGLINMYTKSGSFKEGNLVFEK 471
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
D ++ N M++GY I G +N A+ F
Sbjct: 472 IENKDLISWNTMVAGY--------------------------GIHGLGEN-----AIRTF 500
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIK-LMIDGFVIISTNLLNMYCV 202
M G P+ VT +V+S+ H G + E R L +IK ++ + ++++
Sbjct: 501 DQMIKDGFEPDGVTFVAVLSACSHAGLVAEGRELFDKMIKEFRVEPQMEHYACMVDLLGR 560
Query: 203 CSSLVEARSLFDEMK-ERNIVSWNVMLNGFAKAGLVELARELFERI 247
L EA + M E N W +LN E+A E +I
Sbjct: 561 AGLLQEASKVVKSMPVEPNACVWGALLNSCRMHKNTEVAEETASQI 606
>gi|356552027|ref|XP_003544373.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Glycine max]
Length = 986
Score = 341 bits (875), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 216/633 (34%), Positives = 333/633 (52%), Gaps = 71/633 (11%)
Query: 46 HSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSC---STLDPVACNIMISGYIRN 102
H+ + +SG SN F+ N+++++Y KCG + A +MFD D V+ N ++S Y+
Sbjct: 282 HATVSRSGFASNVFVCNAVVSMYGKCGALRHAHNMFDDLCHRGIQDLVSWNSVVSAYMWA 341
Query: 103 DRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVI 162
N A +F K + +S P+ ++L +++
Sbjct: 342 SDANTALALFHKMTTRHLMS------------------------------PDVISLVNIL 371
Query: 163 SSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIV 222
+ L R +HG I+ + V + +++MY C + EA +F MK +++V
Sbjct: 372 PACASLAASLRGRQVHGFSIRSGLVDDVFVGNAVVDMYAKCGKMEEANKVFQRMKFKDVV 431
Query: 223 SWNVMLNGFAKAGLVELARELFERIPSK----DVVSWGTMIDGYLQVERLSEALTMYRAM 278
SWN M+ G+++AG +E A LFER+ + DVV+W +I GY Q + EAL ++R M
Sbjct: 432 SWNAMVTGYSQAGRLEHALSLFERMTEENIELDVVTWTAVITGYAQRGQGCEALDVFRQM 491
Query: 279 LCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRI 338
G PN V +V L+SAC A G + H +K FI +
Sbjct: 492 CDCGSRPNVVTLVSLLSACVSVGALLHGKETHCYAIK-------FI-------------L 531
Query: 339 NLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNM--QKRDVYSWSAMISGYAQ 396
NL + G D + N LI + + E AR++F+++ + RDV +W+ MI GYAQ
Sbjct: 532 NLDGP--DPGADD-LKVINGLIDMYAKCQSTEVARKMFDSVSPKDRDVVTWTVMIGGYAQ 588
Query: 397 NEQPNMALELFHGM--VDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNN---SIT 451
+ N AL+LF GM +D +KPN+ T+ A A L+ GR H YVL N S+
Sbjct: 589 HGDANNALQLFSGMFKMDKSIKPNDFTLSCALVACARLAALRFGRQVHAYVLRNFYGSVM 648
Query: 452 LNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYS 511
L ++ +IDMY+K G ++TA VF ++ R +VS W +++ G MHG L+++
Sbjct: 649 LF--VANCLIDMYSKSGDVDTAQIVFDNMPQRN-AVS-WTSLMTGYGMHGRGEDALRVFD 704
Query: 512 DLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRA 571
++ K + + ITF+ VL C H+G+VD G +F M + V+P +HY CMVDL GRA
Sbjct: 705 EMRKVPLVPDGITFLVVLYACSHSGMVDHGINFFNRMSKDFGVDPGPEHYACMVDLWGRA 764
Query: 572 GQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLS 631
G+L +A ++I MPM+ V+W LL+A R+H NVE+GE AA L L+ + S LLS
Sbjct: 765 GRLGEAMKLINEMPMEPTPVVWVALLSACRLHSNVELGEFAANRLLELESGNDGSYTLLS 824
Query: 632 NIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
NIYA+A RW+D IR M+ G+K+ PG S +
Sbjct: 825 NIYANARRWKDVARIRYTMKRTGIKKRPGCSWI 857
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 134/487 (27%), Positives = 232/487 (47%), Gaps = 46/487 (9%)
Query: 137 REALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNL 196
R+ ++R M+ LG P+ T V + +L + LH V + V + +
Sbjct: 241 RDVFTLYRQMKSLGWTPDHYTFPFVFKACANLSSLSLGASLHATVSRSGFASNVFVCNAV 300
Query: 197 LNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWG 256
++MY C +L A ++FD++ R I +D+VSW
Sbjct: 301 VSMYGKCGALRHAHNMFDDLCHRGI----------------------------QDLVSWN 332
Query: 257 TMIDGYLQVERLSEALTMYRAMLCDGI-APNDVMIVDLISACGRAMAFGEGLQIHSIIVK 315
+++ Y+ + AL ++ M + +P+ + +V+++ AC A G Q+H ++
Sbjct: 333 SVVSAYMWASDANTALALFHKMTTRHLMSPDVISLVNILPACASLAASLRGRQVHGFSIR 392
Query: 316 AGFDCYDFIQATIIHFYAACGRINLARLQFE-LGIKDHIASWNALIAGFIRNGMIEDARQ 374
+G F+ ++ YA CG++ A F+ + KD + SWNA++ G+ + G +E A
Sbjct: 393 SGLVDDVFVGNAVVDMYAKCGKMEEANKVFQRMKFKD-VVSWNAMVTGYSQAGRLEHALS 451
Query: 375 LFNNMQKR----DVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIA 430
LF M + DV +W+A+I+GYAQ Q AL++F M D G +PN +T+VS+ A
Sbjct: 452 LFERMTEENIELDVVTWTAVITGYAQRGQGCEALDVFRQMCDCGSRPNVVTLVSLLSACV 511
Query: 431 SSGTLKEGRWAHEYVLNNSITLN------DNLSA--AIIDMYAKCGSINTAFEVFYHIRD 482
S G L G+ H Y + + L+ D+L +IDMYAKC S A ++F +
Sbjct: 512 SVGALLHGKETHCYAIKFILNLDGPDPGADDLKVINGLIDMYAKCQSTEVARKMFDSVSP 571
Query: 483 RTTSVSPWNAIICGLAMHGDANLTLKIYSDLEK--RNIKLNSITFIGVLSTCCHAGLVDL 540
+ V W +I G A HGDAN L+++S + K ++IK N T L C +
Sbjct: 572 KDRDVVTWTVMIGGYAQHGDANNALQLFSGMFKMDKSIKPNDFTLSCALVACARLAALRF 631
Query: 541 GERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAAS 600
G + + + L C++D+ ++G ++ A+ V +MP + + V W +L+
Sbjct: 632 GRQVHAYVLRNFYGSVMLFVANCLIDMYSKSGDVDTAQIVFDNMPQR-NAVSWTSLMTGY 690
Query: 601 RIHGNVE 607
+HG E
Sbjct: 691 GMHGRGE 697
Score = 169 bits (428), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 126/499 (25%), Positives = 233/499 (46%), Gaps = 79/499 (15%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
++LV+ L C++ A +G+Q+H +SGL + F+ N+++++YAKCG + +A +F
Sbjct: 365 ISLVNILPACASLAASLRGRQVHGFSIRSGLVDDVFVGNAVVDMYAKCGKMEEANKVFQR 424
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKC----CVSYTSMIMGFAQNDCWREA 139
D V+ N M++GY + RL A +F++ + V++T++I G+AQ EA
Sbjct: 425 MKFKDVVSWNAMVTGYSQAGRLEHALSLFERMTEENIELDVVTWTAVITGYAQRGQGCEA 484
Query: 140 LEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMI---------DGFV 190
L+VFR M G PN VTL S++S+ V +G + + H IK ++ D
Sbjct: 485 LDVFRQMCDCGSRPNVVTLVSLLSACVSVGALLHGKETHCYAIKFILNLDGPDPGADDLK 544
Query: 191 IISTNLLNMYCVCSSLVEARSLFDEM--KERNIVSWNVMLNGFAKAGLVELARELFERIP 248
+I+ L++MY C S AR +FD + K+R++V+W VM+ G+A+ G A +LF
Sbjct: 545 VIN-GLIDMYAKCQSTEVARKMFDSVSPKDRDVVTWTVMIGGYAQHGDANNALQLFS--- 600
Query: 249 SKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQ 308
G ++++ I PND + + AC R A G Q
Sbjct: 601 ------------GMFKMDK--------------SIKPNDFTLSCALVACARLAALRFGRQ 634
Query: 309 IHSIIVKAGF-DCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNG 367
+H+ +++ + F+ +I Y+ G ++ A++ F+ + + SW +L+ G+ +G
Sbjct: 635 VHAYVLRNFYGSVMLFVANCLIDMYSKSGDVDTAQIVFDNMPQRNAVSWTSLMTGYGMHG 694
Query: 368 MIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFC 427
EDA ++F+ M+K + P+ IT + V
Sbjct: 695 RGEDALRVFDEMRK-------------------------------VPLVPDGITFLVVLY 723
Query: 428 AIASSGTLKEG-RWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTS 486
A + SG + G + + + + A ++D++ + G + A ++ + T
Sbjct: 724 ACSHSGMVDHGINFFNRMSKDFGVDPGPEHYACMVDLWGRAGRLGEAMKLINEMPMEPTP 783
Query: 487 VSPWNAIICGLAMHGDANL 505
V W A++ +H + L
Sbjct: 784 VV-WVALLSACRLHSNVEL 801
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 117/279 (41%), Gaps = 11/279 (3%)
Query: 384 VYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHE 443
V+ W+ +I P L+ M G P+ T VF A A+ +L G H
Sbjct: 224 VFWWNQLIRRALHLGSPRDVFTLYRQMKSLGWTPDHYTFPFVFKACANLSSLSLGASLHA 283
Query: 444 YVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDR-TTSVSPWNAIICGLAMHGD 502
V + N + A++ MY KCG++ A +F + R + WN+++ D
Sbjct: 284 TVSRSGFASNVFVCNAVVSMYGKCGALRHAHNMFDDLCHRGIQDLVSWNSVVSAYMWASD 343
Query: 503 ANLTLKIYSDLEKRNI-KLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHY 561
AN L ++ + R++ + I+ + +L C L R + D+
Sbjct: 344 ANTALALFHKMTTRHLMSPDVISLVNILPACASLA-ASLRGRQVHGFSIRSGLVDDVFVG 402
Query: 562 GCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLA----ASRIHGNVEVGERAAKSLA 617
+VD+ + G++E+A +V + M K DVV W ++ A R+ + + ER +
Sbjct: 403 NAVVDMYAKCGKMEEANKVFQRMKFK-DVVSWNAMVTGYSQAGRLEHALSLFERMTEENI 461
Query: 618 GLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMK 656
L + + YA G+ +A + ++M DCG +
Sbjct: 462 ELDVV---TWTAVITGYAQRGQGCEALDVFRQMCDCGSR 497
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 65/119 (54%), Gaps = 7/119 (5%)
Query: 3 LDHFHSVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLES-NTFIQ 61
L F +F K+ ++ +D+ L+ AL C+ A+ G+Q+H+ + ++ S F+
Sbjct: 596 LQLFSGMFKMDKS-IKPNDFTLS--CALVACARLAALRFGRQVHAYVLRNFYGSVMLFVA 652
Query: 62 NSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFD---KTPI 117
N LI++Y+K G + A+ +FD+ + V+ +++GY + R DA VFD K P+
Sbjct: 653 NCLIDMYSKSGDVDTAQIVFDNMPQRNAVSWTSLMTGYGMHGRGEDALRVFDEMRKVPL 711
>gi|242075862|ref|XP_002447867.1| hypothetical protein SORBIDRAFT_06g017170 [Sorghum bicolor]
gi|241939050|gb|EES12195.1| hypothetical protein SORBIDRAFT_06g017170 [Sorghum bicolor]
Length = 688
Score = 341 bits (875), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 208/633 (32%), Positives = 330/633 (52%), Gaps = 42/633 (6%)
Query: 39 VSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISG 98
+S + H+ I KS + TF+ N+L++ YA+ G + A+ +FD + + N ++S
Sbjct: 33 LSGARAAHARILKSPVAGETFLLNTLVSTYARLGRLRDARRVFDEIPLRNTFSYNALLSA 92
Query: 99 YIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWR--EALEVFRDMRILGVIPNEV 156
Y R R ++AR +F+ P SY +++ A++ +AL M + N
Sbjct: 93 YARLGRPDEARALFEAIPDPDQCSYNAVVAALARHGRGHAADALRFLAAMHADDFVLNAY 152
Query: 157 TLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEM 216
+ AS +S+ +HGLV + V I + L++MY C
Sbjct: 153 SFASALSACAAEKDSRTGEQVHGLVARSPHADDVHIRSALVDMYAKC------------- 199
Query: 217 KERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYR 276
ER E AR +F+ +P ++VVSW ++I Y Q + EAL ++
Sbjct: 200 -ER-----------------PEDARRVFDAMPERNVVSWNSLITCYEQNGPVGEALMLFV 241
Query: 277 AMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFI-QATIIHFYAAC 335
M+ G +P++V + ++SAC A EG Q+H+ +VK D + ++ YA C
Sbjct: 242 EMMAAGFSPDEVTLSSVMSACAGLAADREGRQVHAHMVKCDRLRDDMVLNNALVDMYAKC 301
Query: 336 GRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYA 395
GR AR F+ I S +++ G+ ++ +EDA+ +F+ M +++V +W+ +I+ YA
Sbjct: 302 GRTWEARCIFDSMPSRSIVSETSILTGYAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYA 361
Query: 396 QNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDN 455
QN + A+ LF + + P T +V A + L+ G+ AH +VL +
Sbjct: 362 QNGEEEEAIRLFVQLKRDSIWPTHYTYGNVLNACGNIADLQLGQQAHVHVLKEGFRFDFG 421
Query: 456 LSA------AIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKI 509
+ +++DMY K GSI+ +VF + R +VS WNA+I G A +G A L +
Sbjct: 422 PESDVFVGNSLVDMYLKTGSIDDGAKVFERMAARD-NVS-WNAMIVGYAQNGRAKDALHL 479
Query: 510 YSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLG 569
+ + N +S+T IGVLS C H+GLVD G RYF SM + + P HY CMVDLLG
Sbjct: 480 FERMLCSNENPDSVTMIGVLSACGHSGLVDEGRRYFHSMTEDHGITPSRDHYTCMVDLLG 539
Query: 570 RAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVL 629
RAG L++AEE+I MPM+ D V+W +LL A R+H NVE+GE A L L P + VL
Sbjct: 540 RAGHLKEAEELINDMPMEPDSVLWASLLGACRLHKNVELGEWTAGRLFELDPQNSGPYVL 599
Query: 630 LSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
LSN+YA+ G+W + F +R+ M+D G+ + PG S
Sbjct: 600 LSNMYAEMGKWAEVFRVRRSMKDRGVSKQPGCS 632
Score = 208 bits (529), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 135/483 (27%), Positives = 231/483 (47%), Gaps = 59/483 (12%)
Query: 25 ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSC 84
+ SAL C+A G+Q+H L+ +S + I+++L+++YAKC A+ +FD+
Sbjct: 153 SFASALSACAAEKDSRTGEQVHGLVARSPHADDVHIRSALVDMYAKCERPEDARRVFDA- 211
Query: 85 STLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFR 144
P + VS+ S+I + QN EAL +F
Sbjct: 212 ------------------------------MPERNVVSWNSLITCYEQNGPVGEALMLFV 241
Query: 145 DMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKL-MIDGFVIISTNLLNMYCVC 203
+M G P+EVTL+SV+S+ L E R +H ++K + ++++ L++MY C
Sbjct: 242 EMMAAGFSPDEVTLSSVMSACAGLAADREGRQVHAHMVKCDRLRDDMVLNNALVDMYAKC 301
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYL 263
EAR +FD M R+IVS +L G+AK+ VE A+ +F ++ K+V++W +I Y
Sbjct: 302 GRTWEARCIFDSMPSRSIVSETSILTGYAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYA 361
Query: 264 QVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDF 323
Q EA+ ++ + D I P ++++ACG G Q H ++K GF
Sbjct: 362 QNGEEEEAIRLFVQLKRDSIWPTHYTYGNVLNACGNIADLQLGQQAHVHVLKEGF----- 416
Query: 324 IQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRD 383
+F+ G + + N+L+ +++ G I+D ++F M RD
Sbjct: 417 --------------------RFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAARD 456
Query: 384 VYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG-RWAH 442
SW+AMI GYAQN + AL LF M+ + P+ +TM+ V A SG + EG R+ H
Sbjct: 457 NVSWNAMIVGYAQNGRAKDALHLFERMLCSNENPDSVTMIGVLSACGHSGLVDEGRRYFH 516
Query: 443 EYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGD 502
++ IT + + ++D+ + G + A E+ + SV W +++ +H +
Sbjct: 517 SMTEDHGITPSRDHYTCMVDLLGRAGHLKEAEELINDMPMEPDSVL-WASLLGACRLHKN 575
Query: 503 ANL 505
L
Sbjct: 576 VEL 578
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 117/477 (24%), Positives = 206/477 (43%), Gaps = 72/477 (15%)
Query: 158 LASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMK 217
LA ++ S+ +L G R H ++K + G + L++ Y L +AR +FDE+
Sbjct: 23 LADLLRSAPNLSG---ARAAHARILKSPVAGETFLLNTLVSTYARLGRLRDARRVFDEIP 79
Query: 218 ERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVER--LSEALTMY 275
RN S+N +L+ +A+ G + AR LFE IP D S+ ++ + R ++AL
Sbjct: 80 LRNTFSYNALLSAYARLGRPDEARALFEAIPDPDQCSYNAVVAALARHGRGHAADALRFL 139
Query: 276 RAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAAC 335
AM D N +SAC G Q+H ++ ++ I++ ++ YA C
Sbjct: 140 AAMHADDFVLNAYSFASALSACAAEKDSRTGEQVHGLVARSPHADDVHIRSALVDMYAKC 199
Query: 336 GRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYA 395
R AR F+ + ++ SWN+LI + +NG + +
Sbjct: 200 ERPEDARRVFDAMPERNVVSWNSLITCYEQNGPVGE------------------------ 235
Query: 396 QNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDN 455
AL LF M+ AG P+E+T+ SV A A +EGR H +++ +D
Sbjct: 236 -------ALMLFVEMMAAGFSPDEVTLSSVMSACAGLAADREGRQVHAHMVKCDRLRDDM 288
Query: 456 -LSAAIIDMYAKCGSINTAFEVFYHIRDRT-----------------------------T 485
L+ A++DMYAKCG A +F + R+
Sbjct: 289 VLNNALVDMYAKCGRTWEARCIFDSMPSRSIVSETSILTGYAKSANVEDAQVVFSQMVEK 348
Query: 486 SVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYF 545
+V WN +I A +G+ ++++ L++ +I T+ VL+ C + + LG++
Sbjct: 349 NVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSIWPTHYTYGNVLNACGNIADLQLGQQAH 408
Query: 546 -----KSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLL 597
+ + + E D+ +VD+ + G ++D +V M + D V W ++
Sbjct: 409 VHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAAR-DNVSWNAMI 464
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 147/306 (48%), Gaps = 45/306 (14%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFK-SGLESNTFIQNSLINLYAKCGLISQAKSMF 81
E+ L S + C+ A +G+Q+H+ + K L + + N+L+++YAKCG +A+ +F
Sbjct: 252 EVTLSSVMSACAGLAADREGRQVHAHMVKCDRLRDDMVLNNALVDMYAKCGRTWEARCIF 311
Query: 82 DSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALE 141
DS + V+ +++GY ++ + DA+ VF + K +++ +I +AQN EA+
Sbjct: 312 DSMPSRSIVSETSILTGYAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIR 371
Query: 142 VFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGF---------VII 192
+F ++ + P T +V+++ G I + ++ + ++ +GF V +
Sbjct: 372 LFVQLKRDSIWPTHYTYGNVLNA---CGNIADLQLGQQAHVHVLKEGFRFDFGPESDVFV 428
Query: 193 STNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDV 252
+L++MY S+ + +F+ M R+ VSWN M+ G+A+ G + A LFER
Sbjct: 429 GNSLVDMYLKTGSIDDGAKVFERMAARDNVSWNAMIVGYAQNGRAKDALHLFER------ 482
Query: 253 VSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQ-IHS 311
MLC P+ V ++ ++SACG + EG + HS
Sbjct: 483 -------------------------MLCSNENPDSVTMIGVLSACGHSGLVDEGRRYFHS 517
Query: 312 IIVKAG 317
+ G
Sbjct: 518 MTEDHG 523
>gi|359482518|ref|XP_002279880.2| PREDICTED: uncharacterized protein LOC100266920 [Vitis vinifera]
Length = 1753
Score = 341 bits (875), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 213/650 (32%), Positives = 334/650 (51%), Gaps = 55/650 (8%)
Query: 30 LRYCS-AHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLD 88
L+ CS +H++ QQIHS I +G + F+ ++++YA GL+S
Sbjct: 879 LQQCSKSHLS----QQIHSQIIVTGSHRSAFLAARVVSVYAGFGLVS------------- 921
Query: 89 PVACNIMISGYIRNDRLNDAREVFDKTPIKC---CVSYTSMIMGFAQNDCWREALEVFRD 145
DA+ VF+ +PI+C + + S++ + EALE++
Sbjct: 922 ------------------DAQRVFEVSPIECFSNLLLWNSILRANVAHGYCEEALEIYCR 963
Query: 146 MRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSS 205
MR LGV + T VI + +G CR +HG V+++ + + L+ MY
Sbjct: 964 MRKLGVSADGFTFPLVIRACALMGSRKLCRSVHGHVVEMGFQWNLHVGNELMGMYGKIGR 1023
Query: 206 LVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPS----KDVVSWGTMIDG 261
+ +AR +F+ M R+ VSWN M++G+A A E+F + S ++V+W +++
Sbjct: 1024 MDDARKVFERMAVRSCVSWNTMVSGYALNYDCHGASEMFRMMGSAGLEPNLVTWTSLLSS 1083
Query: 262 YLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCY 321
+ + + E + ++ M GI + ++S AF EG IH +VK GF+ Y
Sbjct: 1084 HARCGQHVETMELFGRMRMRGIGATAEALAVVLSVSVDLAAFDEGKVIHGYVVKGGFENY 1143
Query: 322 DFIQATIIHFYAACGRINLARLQFELGIK-DHIASWNALIAGFIRNGMIEDARQLFNNMQ 380
F++ ++I Y G +N AR+ F L IK +I SWNALI+ + G ++A +F ++
Sbjct: 1144 LFVKNSLICLYGKHGNVNAARILF-LEIKTKNIVSWNALISSYADLGWCDEAFAIFLQLE 1202
Query: 381 KRDVY--------SWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASS 432
K D Y SWSA+I G+A Q ALELF M A VK N +T+ SV A
Sbjct: 1203 KTDEYPMVRPNVVSWSAVIGGFASKGQGEEALELFRRMQLAKVKANSVTIASVLSVCAEL 1262
Query: 433 GTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNA 492
L GR H +V+ + + N + +I+MY K GS VF I ++ + WN
Sbjct: 1263 AALHLGREIHGHVVRSLMDGNILVGNGLINMYTKSGSFKEGNLVFEKIENK--DLISWNT 1320
Query: 493 IICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVY 552
++ G +HG ++ + + K + + +TF+ VLS C HAGLV G F M +
Sbjct: 1321 MVAGYGIHGLGENAIRTFDQMIKDGFEPDGVTFVAVLSACSHAGLVAEGRELFDKMIKEF 1380
Query: 553 NVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERA 612
VEP ++HY CMVDLLGRAG L++A +V++SMP++ + +WG LL + R+H N EV E
Sbjct: 1381 RVEPQMEHYACMVDLLGRAGLLQEASKVVKSMPVEPNACVWGALLNSCRMHKNTEVAEET 1440
Query: 613 AKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
A + L S +LLSNIYA +GRWED+ +R + G+K+ PG S
Sbjct: 1441 ASQIFNLNSEIAGSYMLLSNIYAASGRWEDSAKVRISAKTKGLKKTPGQS 1490
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 92/226 (40%), Gaps = 33/226 (14%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+ + S L C+ A+ G++IH + +S ++ N + N LIN+Y K G + +F+
Sbjct: 1250 VTIASVLSVCAELAALHLGREIHGHVVRSLMDGNILVGNGLINMYTKSGSFKEGNLVFEK 1309
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
D ++ N M++GY I G +N A+ F
Sbjct: 1310 IENKDLISWNTMVAGY--------------------------GIHGLGEN-----AIRTF 1338
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIK-LMIDGFVIISTNLLNMYCV 202
M G P+ VT +V+S+ H G + E R L +IK ++ + ++++
Sbjct: 1339 DQMIKDGFEPDGVTFVAVLSACSHAGLVAEGRELFDKMIKEFRVEPQMEHYACMVDLLGR 1398
Query: 203 CSSLVEARSLFDEMK-ERNIVSWNVMLNGFAKAGLVELARELFERI 247
L EA + M E N W +LN E+A E +I
Sbjct: 1399 AGLLQEASKVVKSMPVEPNACVWGALLNSCRMHKNTEVAEETASQI 1444
>gi|297743099|emb|CBI35966.3| unnamed protein product [Vitis vinifera]
Length = 624
Score = 341 bits (875), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 195/573 (34%), Positives = 315/573 (54%), Gaps = 36/573 (6%)
Query: 95 MISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPN 154
+I I ++ AR V D+TP S+ S+I + + + +L ++ M P+
Sbjct: 33 LIPKLIDLHSIDYARFVLDQTPSPTDFSWNSLIRAYTVHGSPQNSLFLYLKMLRSSTKPS 92
Query: 155 EVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFD 214
T V+ + LG + E +H V++L + + +L++MYC C L AR+ +D
Sbjct: 93 NFTFPFVLKACSTLGSVLEGEQIHTHVLRLGFGSDLFVCNSLIDMYCKCFRLDSARNFWD 152
Query: 215 EMKERNIVSWNVMLNGFAKAGLVELARELFERIP-SKDVVSWGTMIDGYLQVERLSEALT 273
+M R+ VSWN +++G+ + G VE AR+LFE +P ++VV W MI+GY + E L+
Sbjct: 153 DMGFRDEVSWNSIISGYVQWGQVEKARDLFEEMPMRRNVVCWTAMINGYGKEGDFVEMLS 212
Query: 274 MYRAML--CDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHF 331
++R ML D + PN +V L+SAC + G + I + +I
Sbjct: 213 LFRQMLVSADEVQPNAATMVCLLSACSTLCNYEVGRFLSVFIDVNKIPLNTILVTALIDM 272
Query: 332 YAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMI 391
Y+ CG + A F+ ++ SWNA+I G ++ G++E+A L+ +M+ +
Sbjct: 273 YSKCGDVEKAWRIFDGVSCKNLPSWNAIITGCVQGGLLEEAIDLYRHMKAQ--------- 323
Query: 392 SGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSIT 451
VKPNEIT+V+V A A G L+ GR H Y+ N +
Sbjct: 324 ----------------------SVKPNEITLVNVLSACAGLGALELGREVHLYLGRNGLD 361
Query: 452 LNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYS 511
LN L+ A++DMYAKCG I+ A +F ++ V+ WNA+I GLA HGD +L ++S
Sbjct: 362 LNVILATALVDMYAKCGKIDDACLIF--VKTSEKDVALWNAMILGLAYHGDGRDSLAVFS 419
Query: 512 DLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRA 571
+ + ++ N +TFIGVLS C H+GLV+ G F SM + + P L+HY CMVDLLGRA
Sbjct: 420 QMVRAGVQPNDVTFIGVLSACNHSGLVEEGRVQFSSMADKHGLSPKLEHYACMVDLLGRA 479
Query: 572 GQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLS 631
G L++A E++++M + D +IWG LL+A RIH N+E+ ++ ++++ Q + +LLS
Sbjct: 480 GHLKEAYELVQNMLIPPDSIIWGALLSACRIHRNLELADKISETIMASQDPNIGFCILLS 539
Query: 632 NIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
NIYA +GRW+D +R+++++ +K+ G S V
Sbjct: 540 NIYASSGRWKDVARVRRQVKEKRIKKPSGCSWV 572
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 135/505 (26%), Positives = 239/505 (47%), Gaps = 79/505 (15%)
Query: 14 KANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGL 73
+++ + S++ V L+ CS +V +G+QIH+ + + G S+ F+ NSLI++Y KC
Sbjct: 86 RSSTKPSNFTFPFV--LKACSTLGSVLEGEQIHTHVLRLGFGSDLFVCNSLIDMYCKCFR 143
Query: 74 ISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPI-KCCVSYTSMIMGFAQ 132
+ A++ +D D V+ N +ISGY++ ++ AR++F++ P+ + V +T+MI G+ +
Sbjct: 144 LDSARNFWDDMGFRDEVSWNSIISGYVQWGQVEKARDLFEEMPMRRNVVCWTAMINGYGK 203
Query: 133 NDCWREALEVFRDMRILG--VIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFV 190
+ E L +FR M + V PN T+ ++S+ L R L + I
Sbjct: 204 EGDFVEMLSLFRQMLVSADEVQPNAATMVCLLSACSTLCNYEVGRFLSVFIDVNKIPLNT 263
Query: 191 IISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSK 250
I+ T L++MY C + +A +FD + +N+ SWN ++ G + GL+E
Sbjct: 264 ILVTALIDMYSKCGDVEKAWRIFDGVSCKNLPSWNAIITGCVQGGLLE------------ 311
Query: 251 DVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIH 310
EA+ +YR M + PN++ +V+++SAC A G ++H
Sbjct: 312 -------------------EAIDLYRHMKAQSVKPNEITLVNVLSACAGLGALELGREVH 352
Query: 311 SIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIE 370
+ + G D + ++ YA CG+I+ A L F + +A WNA+I G +G
Sbjct: 353 LYLGRNGLDLNVILATALVDMYAKCGKIDDACLIFVKTSEKDVALWNAMILGLAYHG--- 409
Query: 371 DARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIA 430
D R +L +F MV AGV+PN++T + V A
Sbjct: 410 DGRD----------------------------SLAVFSQMVRAGVQPNDVTFIGVLSACN 441
Query: 431 SSGTLKEGRWAHEYVLNNSITLNDNLS------AAIIDMYAKCGSINTAFEVFYHIRDRT 484
SG ++EGR V +S+ LS A ++D+ + G + A+E+ ++
Sbjct: 442 HSGLVEEGR-----VQFSSMADKHGLSPKLEHYACMVDLLGRAGHLKEAYELVQNMLIPP 496
Query: 485 TSVSPWNAIICGLAMHGDANLTLKI 509
S+ W A++ +H + L KI
Sbjct: 497 DSII-WGALLSACRIHRNLELADKI 520
>gi|125595802|gb|EAZ35582.1| hypothetical protein OsJ_19868 [Oryza sativa Japonica Group]
Length = 734
Score = 341 bits (874), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 203/638 (31%), Positives = 316/638 (49%), Gaps = 96/638 (15%)
Query: 26 LVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCS 85
S L+ C+A ++ G+ +H+ + G++S +L N+YAKC
Sbjct: 62 FTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALANMYAKC-------------- 107
Query: 86 TLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALE-VFR 144
R DAR VFD+ P++ V++ +++ G+A+N R A+E V R
Sbjct: 108 -----------------RRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVR 150
Query: 145 DMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCS 204
G P+ +TL SV+ + + + CR H I+ ++ V ++T +L+ YC C
Sbjct: 151 MQEEEGERPDSITLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKC- 209
Query: 205 SLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQ 264
G + AR +F+ +P+K+ VSW MIDGY Q
Sbjct: 210 ------------------------------GDIRAARVVFDWMPTKNSVSWNAMIDGYAQ 239
Query: 265 VERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFI 324
EAL ++ M+ +G+ DV ++ + ACG EG+++H ++V+ G D +
Sbjct: 240 NGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSV 299
Query: 325 QATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDV 384
+I Y+ C R++L A +F+ + +R
Sbjct: 300 MNALITMYSKCKRVDL-------------------------------ASHVFDELDRRTQ 328
Query: 385 YSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEY 444
SW+AMI G AQN A+ LF M VKP+ T+VSV A+A + RW H Y
Sbjct: 329 VSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGY 388
Query: 445 VLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDAN 504
+ + + + A+IDMYAKCG +N A +F R+R V WNA+I G HG
Sbjct: 389 SIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARER--HVITWNAMIHGYGSHGFGK 446
Query: 505 LTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCM 564
++++ +++ I N TF+ VLS C HAGLVD G YF SMK Y +EP ++HYG M
Sbjct: 447 AAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTM 506
Query: 565 VDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHG 624
VDLLGRAG+L++A I+ MPM + ++G +L A ++H NVE+ E +A+ + L P G
Sbjct: 507 VDLLGRAGKLDEAWAFIQKMPMDPGLSVYGAMLGACKLHKNVELAEESAQKIFELGPQEG 566
Query: 625 PSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
VLL+NIYA+A W+D +R M G+++ PG+S
Sbjct: 567 VYHVLLANIYANASMWKDVARVRTAMEKNGLQKTPGWS 604
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 117/467 (25%), Positives = 207/467 (44%), Gaps = 67/467 (14%)
Query: 139 ALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLN 198
AL F M G P T S++ G + R +H + ID + +T L N
Sbjct: 43 ALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALAN 102
Query: 199 MYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTM 258
MY C +AR +FD M R+ V+WN ++ G+A+ GL +A E+ R+ +
Sbjct: 103 MYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEE-------- 154
Query: 259 IDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGF 318
+G P+ + +V ++ AC A A + H+ +++G
Sbjct: 155 ----------------------EGERPDSITLVSVLPACANARALAACREAHAFAIRSGL 192
Query: 319 DCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNN 378
+ + I+ Y CG I AR+ F+ + SWNA+I G+ +NG D+R+
Sbjct: 193 EELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNG---DSRE---- 245
Query: 379 MQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG 438
AL LF+ MV+ GV ++++++ A G L EG
Sbjct: 246 ------------------------ALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEG 281
Query: 439 RWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLA 498
HE ++ + N ++ A+I MY+KC ++ A VF + DR T VS WNA+I G A
Sbjct: 282 MRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDEL-DRRTQVS-WNAMILGCA 339
Query: 499 MHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVD-LGERYFKSMKSVYNVEPD 557
+G + +++++ ++ N+K +S T + V+ A + D L R+ +++ D
Sbjct: 340 QNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPAL--ADISDPLQARWIHGYSIRLHLDQD 397
Query: 558 LKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHG 604
+ ++D+ + G++ A + S + V+ W ++ HG
Sbjct: 398 VYVLTALIDMYAKCGRVNIARILFNSARER-HVITWNAMIHGYGSHG 443
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 124/486 (25%), Positives = 202/486 (41%), Gaps = 101/486 (20%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+ LVS L C+ A++ ++ H+ +SGLE + ++++ Y KCG I A
Sbjct: 162 ITLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAA------ 215
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
R VFD P K VS+ +MI G+AQN REAL +F
Sbjct: 216 -------------------------RVVFDWMPTKNSVSWNAMIDGYAQNGDSREALALF 250
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
M GV +V++ + + + LG + E +H L++++ +D V + L+ MY C
Sbjct: 251 NRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKC 310
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYL 263
+ A +FDE+ R VSWN M+ G A+ G E A LF R
Sbjct: 311 KRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTR----------------- 353
Query: 264 QVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDF 323
M + + P+ +V +I A + IH ++ D +
Sbjct: 354 --------------MQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVY 399
Query: 324 IQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRD 383
+ +I YA CGR+N+AR+ F + H+ +WNA+I G+ +G
Sbjct: 400 VLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGF--------------- 444
Query: 384 VYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHE 443
G A A+ELF M G+ PNE T +SV A + +G + EGR E
Sbjct: 445 ---------GKA-------AVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGR---E 485
Query: 444 YV--LNNSITLNDNLS--AAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAM 499
Y + L + ++D+ + G ++ A+ F +S + A++ +
Sbjct: 486 YFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAW-AFIQKMPMDPGLSVYGAMLGACKL 544
Query: 500 HGDANL 505
H + L
Sbjct: 545 HKNVEL 550
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 136/286 (47%), Gaps = 62/286 (21%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
++++++AL+ C + +G ++H L+ + GL+SN + N+LI +Y+KC
Sbjct: 262 DVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKC----------- 310
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
R++ A VFD+ + VS+ +MI+G AQN C +A+ +
Sbjct: 311 --------------------KRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRL 350
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
F M++ V P+ TL SVI + + + R +HG I+L +D V + T L++MY
Sbjct: 351 FTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAK 410
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
C + AR LF+ +ER++++WN M++G+ G + A ELFE + S
Sbjct: 411 CGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSI------------ 458
Query: 263 LQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQ 308
GI PN+ + ++SAC A EG +
Sbjct: 459 -------------------GIVPNETTFLSVLSACSHAGLVDEGRE 485
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 97/390 (24%), Positives = 167/390 (42%), Gaps = 48/390 (12%)
Query: 268 LSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQAT 327
L AL + AM G P L+ C G +H+ + G D
Sbjct: 40 LPAALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATA 99
Query: 328 IIHFYAACGRINLARLQFE-LGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYS 386
+ + YA C R AR F+ + ++D +A WNAL+AG+ RNG+ A ++ MQ+ +
Sbjct: 100 LANMYAKCRRPADARRVFDRMPVRDRVA-WNALVAGYARNGLARMAMEMVVRMQEEE--- 155
Query: 387 WSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVL 446
G +P+ IT+VSV A A++ L R AH + +
Sbjct: 156 ---------------------------GERPDSITLVSVLPACANARALAACREAHAFAI 188
Query: 447 NNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLT 506
+ + N++ AI+D Y KCG I A VF + + SVS WNA+I G A +GD+
Sbjct: 189 RSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTK-NSVS-WNAMIDGYAQNGDSREA 246
Query: 507 LKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVD 566
L +++ + + + + ++ + L C G +D G R + + + ++ ++ ++
Sbjct: 247 LALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRI-GLDSNVSVMNALIT 305
Query: 567 LLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGER--AAKSLAGLQPSHG 624
+ + +++ A V + + V W ++ +G E R L ++P
Sbjct: 306 MYSKCKRVDLASHVFDELDRRTQVS-WNAMILGCAQNGCSEDAVRLFTRMQLENVKPD-- 362
Query: 625 PSRVLLSNIYADA-------GRWEDAFSIR 647
S L+S I A A RW +SIR
Sbjct: 363 -SFTLVSVIPALADISDPLQARWIHGYSIR 391
>gi|115465982|ref|NP_001056590.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|7363286|dbj|BAA93030.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113594630|dbj|BAF18504.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|215737111|dbj|BAG96040.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 734
Score = 341 bits (874), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 203/638 (31%), Positives = 316/638 (49%), Gaps = 96/638 (15%)
Query: 26 LVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCS 85
S L+ C+A ++ G+ +H+ + G++S +L N+YAKC
Sbjct: 62 FTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALANMYAKC-------------- 107
Query: 86 TLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALE-VFR 144
R DAR VFD+ P++ V++ +++ G+A+N R A+E V R
Sbjct: 108 -----------------RRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVR 150
Query: 145 DMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCS 204
G P+ +TL SV+ + + + CR H I+ ++ V ++T +L+ YC C
Sbjct: 151 MQEEEGERPDSITLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKC- 209
Query: 205 SLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQ 264
G + AR +F+ +P+K+ VSW MIDGY Q
Sbjct: 210 ------------------------------GDIRAARVVFDWMPTKNSVSWNAMIDGYAQ 239
Query: 265 VERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFI 324
EAL ++ M+ +G+ DV ++ + ACG EG+++H ++V+ G D +
Sbjct: 240 NGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSV 299
Query: 325 QATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDV 384
+I Y+ C R++L A +F+ + +R
Sbjct: 300 MNALITMYSKCKRVDL-------------------------------ASHVFDELDRRTQ 328
Query: 385 YSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEY 444
SW+AMI G AQN A+ LF M VKP+ T+VSV A+A + RW H Y
Sbjct: 329 VSWNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGY 388
Query: 445 VLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDAN 504
+ + + + A+IDMYAKCG +N A +F R+R V WNA+I G HG
Sbjct: 389 SIRLHLDQDVYVLTALIDMYAKCGRVNIARILFNSARER--HVITWNAMIHGYGSHGFGK 446
Query: 505 LTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCM 564
++++ +++ I N TF+ VLS C HAGLVD G YF SMK Y +EP ++HYG M
Sbjct: 447 AAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTM 506
Query: 565 VDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHG 624
VDLLGRAG+L++A I+ MPM + ++G +L A ++H NVE+ E +A+ + L P G
Sbjct: 507 VDLLGRAGKLDEAWAFIQKMPMDPGLSVYGAMLGACKLHKNVELAEESAQKIFELGPQEG 566
Query: 625 PSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
VLL+NIYA+A W+D +R M G+++ PG+S
Sbjct: 567 VYHVLLANIYANASMWKDVARVRTAMEKNGLQKTPGWS 604
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 117/467 (25%), Positives = 207/467 (44%), Gaps = 67/467 (14%)
Query: 139 ALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLN 198
AL F M G P T S++ G + R +H + ID + +T L N
Sbjct: 43 ALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALAN 102
Query: 199 MYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTM 258
MY C +AR +FD M R+ V+WN ++ G+A+ GL +A E+ R+ +
Sbjct: 103 MYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEE-------- 154
Query: 259 IDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGF 318
+G P+ + +V ++ AC A A + H+ +++G
Sbjct: 155 ----------------------EGERPDSITLVSVLPACANARALAACREAHAFAIRSGL 192
Query: 319 DCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNN 378
+ + I+ Y CG I AR+ F+ + SWNA+I G+ +NG D+R+
Sbjct: 193 EELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNG---DSRE---- 245
Query: 379 MQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG 438
AL LF+ MV+ GV ++++++ A G L EG
Sbjct: 246 ------------------------ALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEG 281
Query: 439 RWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLA 498
HE ++ + N ++ A+I MY+KC ++ A VF + DR T VS WNA+I G A
Sbjct: 282 MRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDEL-DRRTQVS-WNAMILGCA 339
Query: 499 MHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVD-LGERYFKSMKSVYNVEPD 557
+G + +++++ ++ N+K +S T + V+ A + D L R+ +++ D
Sbjct: 340 QNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPAL--ADISDPLQARWIHGYSIRLHLDQD 397
Query: 558 LKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHG 604
+ ++D+ + G++ A + S + V+ W ++ HG
Sbjct: 398 VYVLTALIDMYAKCGRVNIARILFNSARER-HVITWNAMIHGYGSHG 443
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 124/486 (25%), Positives = 202/486 (41%), Gaps = 101/486 (20%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+ LVS L C+ A++ ++ H+ +SGLE + ++++ Y KCG I A
Sbjct: 162 ITLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAA------ 215
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
R VFD P K VS+ +MI G+AQN REAL +F
Sbjct: 216 -------------------------RVVFDWMPTKNSVSWNAMIDGYAQNGDSREALALF 250
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
M GV +V++ + + + LG + E +H L++++ +D V + L+ MY C
Sbjct: 251 NRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKC 310
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYL 263
+ A +FDE+ R VSWN M+ G A+ G E A LF R
Sbjct: 311 KRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTR----------------- 353
Query: 264 QVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDF 323
M + + P+ +V +I A + IH ++ D +
Sbjct: 354 --------------MQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVY 399
Query: 324 IQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRD 383
+ +I YA CGR+N+AR+ F + H+ +WNA+I G+ +G
Sbjct: 400 VLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGF--------------- 444
Query: 384 VYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHE 443
G A A+ELF M G+ PNE T +SV A + +G + EGR E
Sbjct: 445 ---------GKA-------AVELFEEMKSIGIVPNETTFLSVLSACSHAGLVDEGR---E 485
Query: 444 YV--LNNSITLNDNLS--AAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAM 499
Y + L + ++D+ + G ++ A+ F +S + A++ +
Sbjct: 486 YFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAW-AFIQKMPMDPGLSVYGAMLGACKL 544
Query: 500 HGDANL 505
H + L
Sbjct: 545 HKNVEL 550
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 136/286 (47%), Gaps = 62/286 (21%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
++++++AL+ C + +G ++H L+ + GL+SN + N+LI +Y+KC
Sbjct: 262 DVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKC----------- 310
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
R++ A VFD+ + VS+ +MI+G AQN C +A+ +
Sbjct: 311 --------------------KRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRL 350
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
F M++ V P+ TL SVI + + + R +HG I+L +D V + T L++MY
Sbjct: 351 FTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAK 410
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
C + AR LF+ +ER++++WN M++G+ G + A ELFE + S
Sbjct: 411 CGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSI------------ 458
Query: 263 LQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQ 308
GI PN+ + ++SAC A EG +
Sbjct: 459 -------------------GIVPNETTFLSVLSACSHAGLVDEGRE 485
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 97/390 (24%), Positives = 167/390 (42%), Gaps = 48/390 (12%)
Query: 268 LSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQAT 327
L AL + AM G P L+ C G +H+ + G D
Sbjct: 40 LPAALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATA 99
Query: 328 IIHFYAACGRINLARLQFE-LGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYS 386
+ + YA C R AR F+ + ++D +A WNAL+AG+ RNG+ A ++ MQ+ +
Sbjct: 100 LANMYAKCRRPADARRVFDRMPVRDRVA-WNALVAGYARNGLARMAMEMVVRMQEEE--- 155
Query: 387 WSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVL 446
G +P+ IT+VSV A A++ L R AH + +
Sbjct: 156 ---------------------------GERPDSITLVSVLPACANARALAACREAHAFAI 188
Query: 447 NNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLT 506
+ + N++ AI+D Y KCG I A VF + + SVS WNA+I G A +GD+
Sbjct: 189 RSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTK-NSVS-WNAMIDGYAQNGDSREA 246
Query: 507 LKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVD 566
L +++ + + + + ++ + L C G +D G R + + + ++ ++ ++
Sbjct: 247 LALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRI-GLDSNVSVMNALIT 305
Query: 567 LLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGER--AAKSLAGLQPSHG 624
+ + +++ A V + + V W ++ +G E R L ++P
Sbjct: 306 MYSKCKRVDLASHVFDELDRRTQVS-WNAMILGCAQNGCSEDAVRLFTRMQLENVKPD-- 362
Query: 625 PSRVLLSNIYADA-------GRWEDAFSIR 647
S L+S I A A RW +SIR
Sbjct: 363 -SFTLVSVIPALADISDPLQARWIHGYSIR 391
>gi|147856499|emb|CAN78640.1| hypothetical protein VITISV_031739 [Vitis vinifera]
Length = 954
Score = 341 bits (874), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 213/650 (32%), Positives = 334/650 (51%), Gaps = 55/650 (8%)
Query: 30 LRYCS-AHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLD 88
L+ CS +H++ QQIHS I +G + F+ ++++YA GL+S
Sbjct: 41 LQQCSKSHLS----QQIHSQIIVTGSHRSAFLAARVVSVYAGFGLVS------------- 83
Query: 89 PVACNIMISGYIRNDRLNDAREVFDKTPIKC---CVSYTSMIMGFAQNDCWREALEVFRD 145
DA+ VF+ +PI+C + + S++ + EALE++
Sbjct: 84 ------------------DAQRVFEVSPIECFSNLLLWNSILRANVAHGYCEEALEIYCR 125
Query: 146 MRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSS 205
MR LGV + T VI + +G CR +HG V+++ + + L+ MY
Sbjct: 126 MRKLGVSADGFTFPLVIRACALMGSRKLCRSVHGHVVEMGFQWNLHVGNELMGMYGKIGR 185
Query: 206 LVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPS----KDVVSWGTMIDG 261
+ +AR +F+ M R+ VSWN M++G+A A E+F + S ++V+W +++
Sbjct: 186 MDDARKVFERMAVRSCVSWNTMVSGYALNYDCHGASEMFRMMGSAGLEPNLVTWTSLLSS 245
Query: 262 YLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCY 321
+ + + E + ++ M GI + ++S AF EG IH +VK GF+ Y
Sbjct: 246 HARCGQHVETMELFGRMRMRGIGATAEALAVVLSVSVDLAAFDEGKVIHGYVVKGGFENY 305
Query: 322 DFIQATIIHFYAACGRINLARLQFELGIK-DHIASWNALIAGFIRNGMIEDARQLFNNMQ 380
F++ ++I Y G +N AR+ F L IK +I SWNALI+ + G ++A +F ++
Sbjct: 306 LFVKNSLICLYGKHGNVNAARILF-LEIKTKNIVSWNALISSYADLGWCDEAFAIFLQLE 364
Query: 381 KRDVY--------SWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASS 432
K D Y SWSA+I G+A Q ALELF M A VK N +T+ SV A
Sbjct: 365 KTDEYPMVRPNVVSWSAVIGGFASKGQGEEALELFRRMQLAKVKANSVTIASVLSVCAEL 424
Query: 433 GTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNA 492
L GR H +V+ + + N + +I+MY K GS VF I ++ + WN
Sbjct: 425 AALHLGREIHGHVVRSLMDGNILVGNGLINMYTKSGSFKEGNLVFEKIENK--DLISWNT 482
Query: 493 IICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVY 552
++ G +HG ++ + + K + + +TF+ VLS C HAGLV G F M +
Sbjct: 483 MVAGYGIHGLGENAIRTFDQMIKDGFEPDGVTFVAVLSACSHAGLVAEGRELFDKMIKEF 542
Query: 553 NVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERA 612
VEP ++HY CMVDLLGRAG L++A +V++SMP++ + +WG LL + R+H N EV E
Sbjct: 543 RVEPQMEHYACMVDLLGRAGLLQEASKVVKSMPVEPNACVWGALLNSCRMHKNTEVAEET 602
Query: 613 AKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
A + L S +LLSNIYA +GRWED+ +R + G+K+ PG S
Sbjct: 603 ASQIFNLNSEIAGSYMLLSNIYAASGRWEDSAKVRISAKTKGLKKTPGQS 652
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 92/226 (40%), Gaps = 33/226 (14%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+ + S L C+ A+ G++IH + +S ++ N + N LIN+Y K G + +F+
Sbjct: 412 VTIASVLSVCAELAALHLGREIHGHVVRSLMDGNILVGNGLINMYTKSGSFKEGNLVFEK 471
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
D ++ N M++GY I G +N A+ F
Sbjct: 472 IENKDLISWNTMVAGY--------------------------GIHGLGEN-----AIRTF 500
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIK-LMIDGFVIISTNLLNMYCV 202
M G P+ VT +V+S+ H G + E R L +IK ++ + ++++
Sbjct: 501 DQMIKDGFEPDGVTFVAVLSACSHAGLVAEGRELFDKMIKEFRVEPQMEHYACMVDLLGR 560
Query: 203 CSSLVEARSLFDEMK-ERNIVSWNVMLNGFAKAGLVELARELFERI 247
L EA + M E N W +LN E+A E +I
Sbjct: 561 AGLLQEASKVVKSMPVEPNACVWGALLNSCRMHKNTEVAEETASQI 606
>gi|147832325|emb|CAN66581.1| hypothetical protein VITISV_030261 [Vitis vinifera]
Length = 622
Score = 341 bits (874), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 175/476 (36%), Positives = 274/476 (57%), Gaps = 8/476 (1%)
Query: 193 STNLLNMYCVCSSLVEARSLFDEMKERNIV------SWNVMLNGFAKAGLVELARELFER 246
+ L++ CS++ E R + +M + ++ S + +G + AR +F+R
Sbjct: 18 AAQTLHLLQRCSNMEELRQIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDR 77
Query: 247 IPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEG 306
I + W TMI GY + EAL +Y ML + N L+ AC A E
Sbjct: 78 IFRPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSASEET 137
Query: 307 LQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRN 366
QIH+ I+K GF + ++++ Y+ G I ARL F+ + SWN++I G+ +
Sbjct: 138 QQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYTKC 197
Query: 367 GMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVF 426
G IE A ++FN+M +R++ SW++MISG +P AL LFH M AG+K + + +VS
Sbjct: 198 GEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTL 257
Query: 427 CAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTS 486
A A G L +G+W H Y+ + I ++ L +IDMYAKCG + A EVF + ++ S
Sbjct: 258 QACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVS 317
Query: 487 VSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFK 546
V W A+I G A+HG L+ + ++ ++ N +TF G+L+ C HAGLV + F+
Sbjct: 318 V--WTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLFE 375
Query: 547 SMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNV 606
SM+ ++ +P ++HYGCMVDLLGRAG L++AEE+I +MP+K + IWG LL A IHGN+
Sbjct: 376 SMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNACHIHGNL 435
Query: 607 EVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
E+G++ K L + P HG + L++I+A AG W A +R++M++ G+ +LPG S
Sbjct: 436 ELGKQIGKILIQVDPGHGGRYIHLASIHAAAGEWNQAARVRRQMKEQGVSKLPGCS 491
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 100/403 (24%), Positives = 185/403 (45%), Gaps = 33/403 (8%)
Query: 108 AREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVH 167
AR VFD+ + +MI G++ + EAL ++ M V N T ++ +
Sbjct: 71 ARTVFDRIFRPNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSS 130
Query: 168 LGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVM 227
+ E + +H +IK+ + + +LLN+Y + AR LFD++ +R+ VSWN M
Sbjct: 131 MSASEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSM 190
Query: 228 LNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPND 287
++G+ K G +E+A E+F +P ++++SW +MI G + + EAL ++ M GI ++
Sbjct: 191 IDGYTKCGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDN 250
Query: 288 VMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFEL 347
V +V + AC +G IH+ I K + + +I YA CG + A F
Sbjct: 251 VALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRK 310
Query: 348 GIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELF 407
+ ++ W A+I+G YA + + ALE F
Sbjct: 311 MEEKGVSVWTAMISG-------------------------------YAIHGRGREALEWF 339
Query: 408 HGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLN-NSITLNDNLSAAIIDMYAK 466
M AGV+PN++T + A + +G + E + E + + + ++D+ +
Sbjct: 340 MKMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLFESMERIHGFKPSIEHYGCMVDLLGR 399
Query: 467 CGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKI 509
G + A E+ ++ + + + W A++ +HG+ L +I
Sbjct: 400 AGLLKEAEELIENMPVKPNA-AIWGALLNACHIHGNLELGKQI 441
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 98/370 (26%), Positives = 161/370 (43%), Gaps = 72/370 (19%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
L+ CS+ A + QQIH+ I K G S + NSL+N+Y+K G I A+ +FD D
Sbjct: 125 LKACSSMSASEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDT 184
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
V+ N MI GY + + A E+F+ P + +S+TSMI G +EAL +F M+
Sbjct: 185 VSWNSMIDGYTKCGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTA 244
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
G+ + V L S + + LG + + + +H + K I+ I+ L++MY C L EA
Sbjct: 245 GIKLDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEA 304
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLS 269
+F +M+E+ + W M++G+A G R
Sbjct: 305 IEVFRKMEEKGVSVWTAMISGYAIHG-------------------------------RGR 333
Query: 270 EALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATII 329
EAL + M G+ PN + +++AC A
Sbjct: 334 EALEWFMKMQTAGVEPNQMTFTGILTACSHA----------------------------- 364
Query: 330 HFYAACGRINLARLQFE-----LGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ-KRD 383
G ++ A+L FE G K I + ++ R G++++A +L NM K +
Sbjct: 365 ------GLVHEAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPN 418
Query: 384 VYSWSAMISG 393
W A+++
Sbjct: 419 AAIWGALLNA 428
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 105/239 (43%), Gaps = 62/239 (25%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+ALVS L+ C+ + QG+ IH+ I K +E + + LI++YAKCG
Sbjct: 251 VALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCG----------- 299
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
L +A EVF K K +T+MI G+A + REALE F
Sbjct: 300 --------------------DLEEAIEVFRKMEEKGVSVWTAMISGYAIHGRGREALEWF 339
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
M+ GV PN++T ++++ H G + E ++L + + I GF
Sbjct: 340 MKMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLFESMER--IHGF-------------- 383
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSK-DVVSWGTMIDG 261
+ +I + M++ +AGL++ A EL E +P K + WG +++
Sbjct: 384 --------------KPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNA 428
>gi|357112521|ref|XP_003558057.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Brachypodium distachyon]
Length = 656
Score = 341 bits (874), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 208/653 (31%), Positives = 329/653 (50%), Gaps = 64/653 (9%)
Query: 44 QIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRND 103
QIH+ SGL ++ F + L+ +F S S L P+ +
Sbjct: 22 QIHAQFIASGLLADAFAASRLL--------------LFTSASRLLPLPFH---------H 58
Query: 104 RLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVIS 163
L R V C S ++G + C L ++ L P+ T + +
Sbjct: 59 SLRLLRLVRYPNAFSCNTLLKSALIGGMPHLC----LPLYAS---LPAPPDSYTHPILAA 111
Query: 164 SSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVS 223
+ + E R +H + + + L+ MY C L +AR +FD + VS
Sbjct: 112 ACASRKDVIEGRQVHAHAVSHGFGDNLYLRNALIFMYSACGCLWDARRVFDAGPVWDAVS 171
Query: 224 WNVMLNGFAKAGLVELARELFERIPSK-------------------------------DV 252
WN +L + AG V+ A E+F ++P + D+
Sbjct: 172 WNTILAAYVHAGDVDQAVEVFAQMPKRNATAVSSMVSLFGRRGMVDEARRVFDAAECRDI 231
Query: 253 VSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSI 312
+W MI + + + +EAL ++ M + ++ ++V ++SAC ++ G H +
Sbjct: 232 FTWTAMISCFERNDMFAEALHVFSCMRRERWHVDEPLMVSVVSACAQSEVIQNGQMCHGL 291
Query: 313 IVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDA 372
+++AG +Q +IH Y++C + AR F+ G SWN++IAG+++NG ++DA
Sbjct: 292 VIRAGLCSQVNVQNALIHMYSSCLDVFAARRLFDSGECLDQYSWNSMIAGYLKNGHVKDA 351
Query: 373 RQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASS 432
LF+ M +D SWS +ISG QN Q + AL +F M G++P+E+T+VSV A +
Sbjct: 352 MALFSAMPNKDNVSWSTVISGCVQNNQSSDALTVFDNMQAQGIRPDEVTIVSVISACTNL 411
Query: 433 GTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNA 492
L++G+ HEY+ N ++ L ++I+MY KCG + A E F + ++ T WNA
Sbjct: 412 SALEKGKSVHEYIKQNQYYVSLVLGTSLINMYMKCGCLEAALEAFNIMEEKGTPC--WNA 469
Query: 493 IICGLAMHGDANLTLKIYSDLEKRNIKL-NSITFIGVLSTCCHAGLVDLGERYFKSMKSV 551
+I GLAM+G +L ++S++E + N ITF GVLS C HAGLVD G +FK M+
Sbjct: 470 VIVGLAMNGLVMKSLDMFSEMEASDTATPNEITFTGVLSACRHAGLVDEGRHFFKLMQHR 529
Query: 552 YNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGER 611
Y + P+++HYGCMVDLLGRAG +++AE++I+SMPM DV WG LL A HG EVGER
Sbjct: 530 YQIVPNIRHYGCMVDLLGRAGYVKEAEDMIQSMPMSPDVPAWGALLGACWKHGEYEVGER 589
Query: 612 AAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
+ L P H + +LSNIYA G W+ +R M+ ++++ G S V
Sbjct: 590 VGRKLVNRDPLHDGFQTMLSNIYAKEGMWQSVDDLRGSMKQRHVQKVSGHSVV 642
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 141/521 (27%), Positives = 235/521 (45%), Gaps = 71/521 (13%)
Query: 33 CSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVAC 92
C++ V +G+Q+H+ G N +++N+LI +Y+ CG + A+ +FD+ D V+
Sbjct: 113 CASRKDVIEGRQVHAHAVSHGFGDNLYLRNALIFMYSACGCLWDARRVFDAGPVWDAVSW 172
Query: 93 NIMISGYI-------------------------------RNDRLNDAREVFDKTPIKCCV 121
N +++ Y+ R +++AR VFD +
Sbjct: 173 NTILAAYVHAGDVDQAVEVFAQMPKRNATAVSSMVSLFGRRGMVDEARRVFDAAECRDIF 232
Query: 122 SYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLV 181
++T+MI F +ND + EAL VF MR +E + SV+S+ I +M HGLV
Sbjct: 233 TWTAMISCFERNDMFAEALHVFSCMRRERWHVDEPLMVSVVSACAQSEVIQNGQMCHGLV 292
Query: 182 IKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELAR 241
I+ + V + L++MY C + AR LFD + + SWN M+ G+ K G V+ A
Sbjct: 293 IRAGLCSQVNVQNALIHMYSSCLDVFAARRLFDSGECLDQYSWNSMIAGYLKNGHVKDAM 352
Query: 242 ELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAM 301
LF +P+KD VSW T+I G +Q + S+ALT++ M GI P++V IV +ISAC
Sbjct: 353 ALFSAMPNKDNVSWSTVISGCVQNNQSSDALTVFDNMQAQGIRPDEVTIVSVISACTNLS 412
Query: 302 AFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIA 361
A +G +H I + + + ++I+ Y CG + A F + + WNA+I
Sbjct: 413 ALEKGKSVHEYIKQNQYYVSLVLGTSLINMYMKCGCLEAALEAFNIMEEKGTPCWNAVIV 472
Query: 362 GFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEIT 421
G NG++ + +F+ M+ D + PNEIT
Sbjct: 473 GLAMNGLVMKSLDMFSEMEASDTAT------------------------------PNEIT 502
Query: 422 MVSVFCAIASSGTLKEGR-----WAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEV 476
V A +G + EGR H Y I N ++D+ + G + A ++
Sbjct: 503 FTGVLSACRHAGLVDEGRHFFKLMQHRY----QIVPNIRHYGCMVDLLGRAGYVKEAEDM 558
Query: 477 FYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRN 517
+ + V W A++ HG+ + ++ L R+
Sbjct: 559 IQSM-PMSPDVPAWGALLGACWKHGEYEVGERVGRKLVNRD 598
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/367 (26%), Positives = 171/367 (46%), Gaps = 40/367 (10%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E +VS + C+ + GQ H L+ ++GL S +QN+LI++Y+ C + A+ +FD
Sbjct: 266 EPLMVSVVSACAQSEVIQNGQMCHGLVIRAGLCSQVNVQNALIHMYSSCLDVFAARRLFD 325
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
S LD + N MI+GY++N + DA +F P K VS++++I G QN+ +AL V
Sbjct: 326 SGECLDQYSWNSMIAGYLKNGHVKDAMALFSAMPNKDNVSWSTVISGCVQNNQSSDALTV 385
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
F +M+ G+ P+EVT+ SVIS+ +L + + + +H + + +++ T+L+NMY
Sbjct: 386 FDNMQAQGIRPDEVTIVSVISACTNLSALEKGKSVHEYIKQNQYYVSLVLGTSLINMYMK 445
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
C L A F+ M+E+ WN ++ G A GLV + ++F + + D +
Sbjct: 446 CGCLEAALEAFNIMEEKGTPCWNAVIVGLAMNGLVMKSLDMFSEMEASDTAT-------- 497
Query: 263 LQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEG-----LQIHSIIVKAG 317
PN++ ++SAC A EG L H +
Sbjct: 498 ----------------------PNEITFTGVLSACRHAGLVDEGRHFFKLMQHRYQIVPN 535
Query: 318 FDCYDFIQATIIHFYAACGRINLARLQFE-LGIKDHIASWNALIAGFIRNGMIEDARQLF 376
Y ++ G + A + + + + +W AL+ ++G E ++
Sbjct: 536 IRHY----GCMVDLLGRAGYVKEAEDMIQSMPMSPDVPAWGALLGACWKHGEYEVGERVG 591
Query: 377 NNMQKRD 383
+ RD
Sbjct: 592 RKLVNRD 598
>gi|297849508|ref|XP_002892635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338477|gb|EFH68894.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 809
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 205/635 (32%), Positives = 318/635 (50%), Gaps = 95/635 (14%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
L+ C + G++IH L+ KSG + F L N+YAKC
Sbjct: 142 LKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKC------------------ 183
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
++++AR+VFD+ P + VS+ +++ G++QN R ALE+ M
Sbjct: 184 -------------RQVHEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVNLMCEE 230
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
+ P+ +T+ SV+ + L I + +HG ++ D V I+T L++MY C SL
Sbjct: 231 NLKPSFITIVSVLPAVSALRLIRIGKEIHGYAMRAGFDSLVNIATALVDMYAKCGSL--- 287
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLS 269
+ AR LF+ + ++VVSW +MID Y+Q E
Sbjct: 288 ----------------------------KTARLLFDGMLERNVVSWNSMIDAYVQNENPK 319
Query: 270 EALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATII 329
EA+ +++ ML +G+ P DV ++ + AC D D + I
Sbjct: 320 EAMVIFQKMLDEGVKPTDVSVMGALHACA--------------------DLGDLERGRFI 359
Query: 330 HFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSA 389
H +L EL + +++ N+LI+ + + ++ A +F +Q R + SW+A
Sbjct: 360 H-----------KLSVELELDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTIVSWNA 408
Query: 390 MISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNS 449
MI G+AQN +P AL F M VKP+ T VSV AIA +W H V+ N
Sbjct: 409 MILGFAQNGRPIEALNYFSQMQARTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRNC 468
Query: 450 ITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKI 509
+ N ++ A++DMYAKCG+I A +F + +R V+ WNA+I G HG L++
Sbjct: 469 LDKNVFVTTALVDMYAKCGAIMIARLIFDMMSER--HVTTWNAMIDGYGTHGIGKAALEL 526
Query: 510 YSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLG 569
+ +++K I+ N +TF+ V+S C H+GLV+ G + F MK Y++EP + HYG MVDLLG
Sbjct: 527 FEEMQKGTIRPNGVTFLSVISACSHSGLVEAGLKCFHMMKENYSIEPSMDHYGAMVDLLG 586
Query: 570 RAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVL 629
RAG+L +A + I MP+K V ++G +L A +IH NV E+ A+ L L P G VL
Sbjct: 587 RAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKVAERLFELNPEDGGYHVL 646
Query: 630 LSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
L+NIY A WE +R M G+++ PG S V
Sbjct: 647 LANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMV 681
Score = 190 bits (482), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 154/624 (24%), Positives = 271/624 (43%), Gaps = 113/624 (18%)
Query: 2 PLDHFHSVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQ 61
P+ H F SQ+ + + YE L CS+ + + + I LIFK+GL Q
Sbjct: 16 PISSSHRHFLSQRNYIPANVYEHPAALLLERCSS---LKELRHILPLIFKNGLYQEHLFQ 72
Query: 62 NSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCV 121
L++L+ + G + +A +F+ P+ + +LN V
Sbjct: 73 TKLVSLFCRYGSVDEAARVFE------PI-----------DKKLN--------------V 101
Query: 122 SYTSMIMGFAQNDCWREALEVF---RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLH 178
Y +M+ GFA+ +AL+ F RD + V+ N L V L E +H
Sbjct: 102 LYYTMLKGFAKVSDLDKALKFFVRMRDDEVEPVVYNFTYLLKVCGDEAELRVGKE---IH 158
Query: 179 GLVIK--LMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGL 236
GL++K +D F + T L NMY C + EAR +FD M ER++VSWN ++ G+++ G+
Sbjct: 159 GLLVKSGFSLDLFAM--TGLENMYAKCRQVHEARKVFDRMPERDLVSWNTIVAGYSQNGM 216
Query: 237 VELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISA 296
+ AL M M + + P+ + IV ++ A
Sbjct: 217 ARM-------------------------------ALEMVNLMCEENLKPSFITIVSVLPA 245
Query: 297 CGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASW 356
G +IH ++AGFD I ++ YA CG + ARL F+ ++ ++ SW
Sbjct: 246 VSALRLIRIGKEIHGYAMRAGFDSLVNIATALVDMYAKCGSLKTARLLFDGMLERNVVSW 305
Query: 357 NALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVK 416
N++I Y QNE P A+ +F M+D GVK
Sbjct: 306 NSMI-------------------------------DAYVQNENPKEAMVIFQKMLDEGVK 334
Query: 417 PNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEV 476
P +++++ A A G L+ GR+ H+ + + N ++ ++I MY KC ++TA +
Sbjct: 335 PTDVSVMGALHACADLGDLERGRFIHKLSVELELDRNVSVVNSLISMYCKCKEVDTAASM 394
Query: 477 FYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAG 536
F ++ RT + WNA+I G A +G L +S ++ R +K ++ T++ V++
Sbjct: 395 FGKLQSRT--IVSWNAMILGFAQNGRPIEALNYFSQMQARTVKPDTFTYVSVITAIAELS 452
Query: 537 LVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTL 596
+ ++ + ++ ++ +VD+ + G + A +I M + V W +
Sbjct: 453 ITHHA-KWIHGVVMRNCLDKNVFVTTALVDMYAKCGAIMIA-RLIFDMMSERHVTTWNAM 510
Query: 597 LAASRIHGNVEVGERAAKSLAGLQ 620
+ HG +G+ A + +Q
Sbjct: 511 IDGYGTHG---IGKAALELFEEMQ 531
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 124/495 (25%), Positives = 218/495 (44%), Gaps = 95/495 (19%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+ +VS L SA + G++IH ++G +S I +L+++YAKCG
Sbjct: 237 ITIVSVLPAVSALRLIRIGKEIHGYAMRAGFDSLVNIATALVDMYAKCG----------- 285
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
L AR +FD + VS+ SMI + QN+ +EA+ +F
Sbjct: 286 --------------------SLKTARLLFDGMLERNVVSWNSMIDAYVQNENPKEAMVIF 325
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
+ M GV P +V++ + + LG + R +H L ++L +D V + +L++MYC C
Sbjct: 326 QKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELELDRNVSVVNSLISMYCKC 385
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYL 263
+ A S+F +++ R IVSWN M+ GFA+ G
Sbjct: 386 KEVDTAASMFGKLQSRTIVSWNAMILGFAQNG---------------------------- 417
Query: 264 QVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDF 323
R EAL + M + P+ V +I+A IH ++++ D F
Sbjct: 418 ---RPIEALNYFSQMQARTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRNCLDKNVF 474
Query: 324 IQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRD 383
+ ++ YA CG I +ARL F++ + H+ +WNA+I G+ +G+ + A +LF MQK
Sbjct: 475 VTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGIGKAALELFEEMQK-- 532
Query: 384 VYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG-RWAH 442
++PN +T +SV A + SG ++ G + H
Sbjct: 533 -----------------------------GTIRPNGVTFLSVISACSHSGLVEAGLKCFH 563
Query: 443 EYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGD 502
N SI + + A++D+ + G +N A++ + + +V+ + A++ +H +
Sbjct: 564 MMKENYSIEPSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVK-PAVNVYGAMLGACQIHKN 622
Query: 503 ANLTLKIYSDLEKRN 517
N K+ L + N
Sbjct: 623 VNFAEKVAERLFELN 637
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 155/353 (43%), Gaps = 86/353 (24%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
+++++ AL C+ + +G+ IH L + L+ N + NSLI++Y KC + A SMF
Sbjct: 337 DVSVMGALHACADLGDLERGRFIHKLSVELELDRNVSVVNSLISMYCKCKEVDTAASMFG 396
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+ V+ N MI +GFAQN EAL
Sbjct: 397 KLQSRTIVSWNAMI-------------------------------LGFAQNGRPIEALNY 425
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
F M+ V P+ T SVI++ L + +HG+V++ +D V ++T L++MY
Sbjct: 426 FSQMQARTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRNCLDKNVFVTTALVDMYAK 485
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
C +++ AR +FD M ER++ +WN M++G+ G+ + A ELFE + GT
Sbjct: 486 CGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGIGKAALELFEEMQK------GT----- 534
Query: 263 LQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD 322
I PN V + +ISAC HS +V+AG C+
Sbjct: 535 --------------------IRPNGVTFLSVISACS-----------HSGLVEAGLKCFH 563
Query: 323 F------IQATIIHFYAA------CGRINLA-RLQFELGIKDHIASWNALIAG 362
I+ ++ H+ A GR+N A ++ +K + + A++
Sbjct: 564 MMKENYSIEPSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGA 616
>gi|356515320|ref|XP_003526349.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 816
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 199/637 (31%), Positives = 321/637 (50%), Gaps = 99/637 (15%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
L+ ++ + +G++IH ++ +G +SN F +++NLYAKC
Sbjct: 149 LQLSGENLDLRRGREIHGMVITNGFQSNLFAMTAVVNLYAKC------------------ 190
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
++ DA ++F++ P + VS+ +++ G+AQN R A++V M+
Sbjct: 191 -------------RQIEDAYKMFERMPQRDLVSWNTVVAGYAQNGFARRAVQVVLQMQEA 237
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
G P+ +TL SV+ + L + R +HG + + V ++T +L+ Y C S
Sbjct: 238 GQKPDSITLVSVLPAVADLKALRIGRSIHGYAFRAGFEYMVNVATAMLDTYFKCGS---- 293
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLS 269
V AR +F+ + S++VVSW TMIDGY Q
Sbjct: 294 ---------------------------VRSARLVFKGMSSRNVVSWNTMIDGYAQNGESE 326
Query: 270 EALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSII--VKAGFDCYDFIQAT 327
EA + ML +G+ P +V ++ + AC G +H ++ K GFD + +
Sbjct: 327 EAFATFLKMLDEGVEPTNVSMMGALHACANLGDLERGRYVHRLLDEKKIGFDVS--VMNS 384
Query: 328 IIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSW 387
+I Y+ C R+++A +F N++ + V +W
Sbjct: 385 LISMYSKCKRVDIAA-------------------------------SVFGNLKHKTVVTW 413
Query: 388 SAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLN 447
+AMI GYAQN N AL LF M +KP+ T+VSV A+A ++ +W H +
Sbjct: 414 NAMILGYAQNGCVNEALNLFCEMQSHDIKPDSFTLVSVITALADLSVTRQAKWIHGLAIR 473
Query: 448 NSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTL 507
+ N + A+ID +AKCG+I TA ++F +++R V WNA+I G +G L
Sbjct: 474 TLMDKNVFVCTALIDTHAKCGAIQTARKLFDLMQER--HVITWNAMIDGYGTNGHGREAL 531
Query: 508 KIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDL 567
++++++ ++K N ITF+ V++ C H+GLV+ G YF+SMK Y +EP + HYG MVDL
Sbjct: 532 DLFNEMQNGSVKPNEITFLSVIAACSHSGLVEEGMYYFESMKENYGLEPTMDHYGAMVDL 591
Query: 568 LGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSR 627
LGRAG+L+DA + I+ MP+K + + G +L A RIH NVE+GE+ A L L P G
Sbjct: 592 LGRAGRLDDAWKFIQDMPVKPGITVLGAMLGACRIHKNVELGEKTADELFDLDPDDGGYH 651
Query: 628 VLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
VLL+N+YA A W+ +R M G+++ PG S V
Sbjct: 652 VLLANMYASASMWDKVARVRTAMEKKGIQKTPGCSLV 688
Score = 149 bits (375), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 125/506 (24%), Positives = 210/506 (41%), Gaps = 97/506 (19%)
Query: 9 VFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLY 68
V Q+A Q D + LVS L + A+ G+ IH F++G E + ++++ Y
Sbjct: 231 VLQMQEAG-QKPD-SITLVSVLPAVADLKALRIGRSIHGYAFRAGFEYMVNVATAMLDTY 288
Query: 69 AKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIM 128
KCG + A+ +F S+ + V+ N MI GY
Sbjct: 289 FKCGSVRSARLVFKGMSSRNVVSWNTMIDGY----------------------------- 319
Query: 129 GFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDG 188
AQN EA F M GV P V++ + + +LG + R +H L+ + I
Sbjct: 320 --AQNGESEEAFATFLKMLDEGVEPTNVSMMGALHACANLGDLERGRYVHRLLDEKKIGF 377
Query: 189 FVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIP 248
V + +L++MY C + A S+F +K + +V+WN M+ G+A+ G V
Sbjct: 378 DVSVMNSLISMYSKCKRVDIAASVFGNLKHKTVVTWNAMILGYAQNGCV----------- 426
Query: 249 SKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQ 308
+EAL ++ M I P+ +V +I+A +
Sbjct: 427 --------------------NEALNLFCEMQSHDIKPDSFTLVSVITALADLSVTRQAKW 466
Query: 309 IHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGM 368
IH + ++ D F+ +I +A CG I AR F+L + H+ +WNA+I G+ NG
Sbjct: 467 IHGLAIRTLMDKNVFVCTALIDTHAKCGAIQTARKLFDLMQERHVITWNAMIDGYGTNGH 526
Query: 369 IEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCA 428
+A LFN MQ + VKPNEIT +SV A
Sbjct: 527 GREALDLFNEMQ-------------------------------NGSVKPNEITFLSVIAA 555
Query: 429 IASSGTLKEGRWAHEYVLNN-SITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSV 487
+ SG ++EG + E + N + + A++D+ + G ++ A++ F +
Sbjct: 556 CSHSGLVEEGMYYFESMKENYGLEPTMDHYGAMVDLLGRAGRLDDAWK-FIQDMPVKPGI 614
Query: 488 SPWNAIICGLAMHGDANLTLKIYSDL 513
+ A++ +H + L K +L
Sbjct: 615 TVLGAMLGACRIHKNVELGEKTADEL 640
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 97/400 (24%), Positives = 176/400 (44%), Gaps = 39/400 (9%)
Query: 202 VCSSLVEARSLFDEMKERNIVSWNV----MLNGFAKAGLVELARELFERIPSKDVVSWGT 257
+C+SL E + + + + ++ +++ F K + A +FE + K V + T
Sbjct: 53 LCTSLKELHQILPLIIKNGFYNEHLFQTKLISLFCKFNSITEAARVFEPVEHKLDVLYHT 112
Query: 258 MIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAG 317
M+ GY + L +A+ Y M CD + P L+ G + G +IH +++ G
Sbjct: 113 MLKGYAKNSTLRDAVRFYERMRCDEVMPVVYDFTYLLQLSGENLDLRRGREIHGMVITNG 172
Query: 318 FDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFN 377
F F +++ YA C +I A FE + + SWN ++AG+ +NG A Q+
Sbjct: 173 FQSNLFAMTAVVNLYAKCRQIEDAYKMFERMPQRDLVSWNTVVAGYAQNGFARRAVQVVL 232
Query: 378 NMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKE 437
MQ +AG KP+ IT+VSV A+A L+
Sbjct: 233 QMQ-------------------------------EAGQKPDSITLVSVLPAVADLKALRI 261
Query: 438 GRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGL 497
GR H Y N++ A++D Y KCGS+ +A VF + R +V WN +I G
Sbjct: 262 GRSIHGYAFRAGFEYMVNVATAMLDTYFKCGSVRSARLVFKGMSSR--NVVSWNTMIDGY 319
Query: 498 AMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPD 557
A +G++ + + ++ +++ +G L C + G ++ G RY + + D
Sbjct: 320 AQNGESEEAFATFLKMLDEGVEPTNVSMMGALHACANLGDLERG-RYVHRLLDEKKIGFD 378
Query: 558 LKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLL 597
+ ++ + + +++ A V ++ K VV W ++
Sbjct: 379 VSVMNSLISMYSKCKRVDIAASVFGNLKHKT-VVTWNAMI 417
>gi|302816499|ref|XP_002989928.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
gi|300142239|gb|EFJ08941.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
Length = 818
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 200/655 (30%), Positives = 333/655 (50%), Gaps = 75/655 (11%)
Query: 14 KANLQN--SDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKC 71
+ NLQ +D+ + VS L CS+ ++QG++IH+ +F SGL+S + N+L+ +YA+
Sbjct: 100 RMNLQGLGTDH-VTFVSVLGACSS---LAQGREIHNRVFYSGLDSFQSLANALVTMYARF 155
Query: 72 GLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFA 131
G + DA+ +F + S+ ++I+ +
Sbjct: 156 GSV-------------------------------GDAKRMFQSLQTRDETSWNAVILAHS 184
Query: 132 QNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVI 191
Q+ W AL +F++M+ + PN T +VIS + E R +H ++ D ++
Sbjct: 185 QSGDWSGALRIFKEMKC-DMKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDSDLV 243
Query: 192 ISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKD 251
++T L+NMY C S EA RE+F+++ +D
Sbjct: 244 VATALINMYGKCGSSHEA-------------------------------REVFDKMKKRD 272
Query: 252 VVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHS 311
+VSW MI Y+Q EAL +Y+ + +G V ++ AC A +G +HS
Sbjct: 273 MVSWNVMIGCYVQNGDFHEALELYQKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHS 332
Query: 312 IIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIED 371
I++ G D + +++ YA CG + AR F +W+ LI + NG +D
Sbjct: 333 HILERGLDSEVAVATALVNMYAKCGSLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKD 392
Query: 372 ARQ---LFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDA-GVKPNEITMVSVFC 427
AR+ +F+ + RD W+AMI+ Y QN A+++F M A G+KP+ +T ++V
Sbjct: 393 ARKARKVFDRLGSRDTICWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLE 452
Query: 428 AIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSV 487
A AS G L E + H + + + N ++ +I+MYA+CGS+ A +F +++T V
Sbjct: 453 ACASLGRLSEVKALHAQISESELESNVVVTNTLINMYARCGSLEEAERLFAAAKEKT--V 510
Query: 488 SPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKS 547
W A++ + +G L ++ +++ +K + +T+ +L C H G ++ G RYF
Sbjct: 511 VSWTAMVAAFSQYGRYAEALDLFQEMDLEGVKPDDVTYTSILFVCTHGGSLEQGWRYFTD 570
Query: 548 MKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVE 607
M ++ + P H+ MVDLLGR+G+L DA+E++ SMP + D V W T L A RIHG +E
Sbjct: 571 MAELHGLAPTADHFAAMVDLLGRSGRLFDAKELLESMPFEPDPVAWMTFLTACRIHGKLE 630
Query: 608 VGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
+GE AA+ + L PS + +SNIYA G WE S+RK+M + G+K+LPG S
Sbjct: 631 LGEAAAERVYELDPSSTAPYIAMSNIYAAHGMWEKVASVRKKMEERGLKKLPGLS 685
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 126/503 (25%), Positives = 232/503 (46%), Gaps = 72/503 (14%)
Query: 9 VFNSQKANLQ-NSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINL 67
+F K +++ NS + ++S S + +G++IH+ I +G +S+ + +LIN+
Sbjct: 195 IFKEMKCDMKPNSTTYINVISGF---STPEVLPEGRKIHAEIVANGFDSDLVVATALINM 251
Query: 68 YAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMI 127
Y KCG ++AREVFDK + VS+ MI
Sbjct: 252 YGKCG-------------------------------SSHEAREVFDKMKKRDMVSWNVMI 280
Query: 128 MGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMID 187
+ QN + EALE+++ + + G + T S++ + + + + R++H +++ +D
Sbjct: 281 GCYVQNGDFHEALELYQKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLD 340
Query: 188 GFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGL---VELARELF 244
V ++T L+NMY C SL EAR +F+ MK R+ V+W+ ++ +A G AR++F
Sbjct: 341 SEVAVATALVNMYAKCGSLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVF 400
Query: 245 ERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAML-CDGIAPNDVMIVDLISACGRAMAF 303
+R+ S+D + W MI Y+Q A+ ++R M G+ P+ V + ++ AC
Sbjct: 401 DRLGSRDTICWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRL 460
Query: 304 GEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGF 363
E +H+ I ++ + + T+I+ YA CG + A F + + SW A++A F
Sbjct: 461 SEVKALHAQISESELESNVVVTNTLINMYARCGSLEEAERLFAAAKEKTVVSWTAMVAAF 520
Query: 364 IRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMV 423
+ G YA+ AL+LF M GVKP+++T
Sbjct: 521 SQYGR-------------------------YAE------ALDLFQEMDLEGVKPDDVTYT 549
Query: 424 SVFCAIASSGTLKEG-RWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRD 482
S+ G+L++G R+ + + + + AA++D+ + G + A E+ +
Sbjct: 550 SILFVCTHGGSLEQGWRYFTDMAELHGLAPTADHFAAMVDLLGRSGRLFDAKELLESMPF 609
Query: 483 RTTSVSPWNAIICGLAMHGDANL 505
V+ W + +HG L
Sbjct: 610 EPDPVA-WMTFLTACRIHGKLEL 631
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 154/639 (24%), Positives = 279/639 (43%), Gaps = 110/639 (17%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+ ++ L CS+ V++G+ +H I S E +T + N+LI++Y KC + A+S+F+S
Sbjct: 8 VTFLTVLCSCSSCGDVAEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSVFES 67
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
D R+ + VS+ +MI +AQN EAL ++
Sbjct: 68 M----------------------DWRQ-------RNVVSWNAMIAAYAQNGHSTEALVLY 98
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
M + G+ + VT SV+ + L + R +H V +D F ++ L+ MY
Sbjct: 99 WRMNLQGLGTDHVTFVSVLGACSSLA---QGREIHNRVFYSGLDSFQSLANALVTMYARF 155
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYL 263
S+ +A+ +F ++ R+ SWN ++ +++G W
Sbjct: 156 GSVGDAKRMFQSLQTRDETSWNAVILAHSQSG------------------DW-------- 189
Query: 264 QVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDF 323
S AL +++ M CD + PN +++IS EG +IH+ IV GFD
Sbjct: 190 -----SGALRIFKEMKCD-MKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDSDLV 243
Query: 324 IQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRD 383
+ +I+ Y CG + AR F+ K + SWN +I +++NG +
Sbjct: 244 VATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVQNGDFHE------------ 291
Query: 384 VYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHE 443
ALEL+ + G K + T VS+ A +S L +GR H
Sbjct: 292 -------------------ALELYQKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHS 332
Query: 444 YVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHG-- 501
++L + ++ A+++MYAKCGS+ A +VF +++R W+ +I A +G
Sbjct: 333 HILERGLDSEVAVATALVNMYAKCGSLEEARKVFNAMKNR--DAVAWSTLIGAYASNGYG 390
Query: 502 -DANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKH 560
DA K++ L R ++I + +++T G + F+ M ++PD
Sbjct: 391 KDARKARKVFDRLGSR----DTICWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVT 446
Query: 561 YGCMVDL---LGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLA 617
+ +++ LGR +++ I ++++VV+ TL+ G++E ER A
Sbjct: 447 FIAVLEACASLGRLSEVKALHAQISESELESNVVVTNTLINMYARCGSLEEAERL---FA 503
Query: 618 GLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMK 656
+ S + ++ GR+ +A + +EM G+K
Sbjct: 504 AAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEMDLEGVK 542
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 119/464 (25%), Positives = 207/464 (44%), Gaps = 72/464 (15%)
Query: 153 PNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSL 212
P+ VT +V+ S G + E R LH + + ++ L++MY C SLV+ARS+
Sbjct: 5 PDNVTFLTVLCSCSSCGDVAEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSV 64
Query: 213 FDEM--KERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSE 270
F+ M ++RN+VSWN M+ +A+ G +E
Sbjct: 65 FESMDWRQRNVVSWNAMIAAYAQNG-------------------------------HSTE 93
Query: 271 ALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIH 330
AL +Y M G+ + V V ++ AC + +G +IH+ + +G D + + ++
Sbjct: 94 ALVLYWRMNLQGLGTDHVTFVSVLGACS---SLAQGREIHNRVFYSGLDSFQSLANALVT 150
Query: 331 FYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAM 390
YA G + A+ F+ ++Q RD SW+A+
Sbjct: 151 MYARFGSVGDAKRMFQ-------------------------------SLQTRDETSWNAV 179
Query: 391 ISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSI 450
I ++Q+ + AL +F M +KPN T ++V ++ L EGR H ++ N
Sbjct: 180 ILAHSQSGDWSGALRIFKEM-KCDMKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGF 238
Query: 451 TLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIY 510
+ ++ A+I+MY KCGS + A EVF ++ R + WN +I +GD + L++Y
Sbjct: 239 DSDLVVATALINMYGKCGSSHEAREVFDKMKKR--DMVSWNVMIGCYVQNGDFHEALELY 296
Query: 511 SDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGR 570
L+ K TF+ +L C + G R S ++ ++ +V++ +
Sbjct: 297 QKLDMEGFKRTKATFVSILGACSSVKALAQG-RLVHSHILERGLDSEVAVATALVNMYAK 355
Query: 571 AGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAK 614
G LE+A +V +M + D V W TL+ A +G + +A K
Sbjct: 356 CGSLEEARKVFNAMKNR-DAVAWSTLIGAYASNGYGKDARKARK 398
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 93/195 (47%), Gaps = 15/195 (7%)
Query: 416 KPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFE 475
+P+ +T ++V C+ +S G + EGR HE + + + + A+I MY KC S+ A
Sbjct: 4 QPDNVTFLTVLCSCSSCGDVAEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARS 63
Query: 476 VFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCH- 534
VF + R +V WNA+I A +G + L +Y + + + + +TF+ VL C
Sbjct: 64 VFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSSL 123
Query: 535 AGLVDLGERYF----KSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADV 590
A ++ R F S +S+ N +V + R G + DA+ + +S+ + D
Sbjct: 124 AQGREIHNRVFYSGLDSFQSLANA---------LVTMYARFGSVGDAKRMFQSLQTR-DE 173
Query: 591 VIWGTLLAASRIHGN 605
W ++ A G+
Sbjct: 174 TSWNAVILAHSQSGD 188
>gi|302770521|ref|XP_002968679.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
gi|300163184|gb|EFJ29795.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
Length = 818
Score = 340 bits (872), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 201/655 (30%), Positives = 333/655 (50%), Gaps = 75/655 (11%)
Query: 14 KANLQN--SDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKC 71
+ NLQ +D+ + VS L CS+ ++QG++IH+ +F SGL+S + N+L+ +YA+
Sbjct: 100 RMNLQGLGTDH-VTFVSVLGACSS---LAQGREIHNRVFYSGLDSFQSLANALVTMYARF 155
Query: 72 GLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFA 131
G + DA+ +F + S+ ++I+ +
Sbjct: 156 GSV-------------------------------GDAKRMFQSLQTRDETSWNAVILAHS 184
Query: 132 QNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVI 191
Q+ W AL +F++M+ V PN T +VIS + E R +H ++ D ++
Sbjct: 185 QSGDWSGALRIFKEMKC-DVKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDTDLV 243
Query: 192 ISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKD 251
++T L+NMY C S EA RE+F+++ +D
Sbjct: 244 VATALINMYGKCGSSHEA-------------------------------REVFDKMKKRD 272
Query: 252 VVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHS 311
+VSW MI Y+ EAL +Y+ + +G V ++ AC A +G +HS
Sbjct: 273 MVSWNVMIGCYVLNGDFHEALELYQKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHS 332
Query: 312 IIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIED 371
I++ G D + +++ YA CG + AR F +W+ LI + NG +D
Sbjct: 333 HILERGLDSEVAVATALVNMYAKCGSLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKD 392
Query: 372 ARQ---LFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDA-GVKPNEITMVSVFC 427
AR+ +F+ + RD SW+AMI+ Y QN A+++F M A G+KP+ +T ++V
Sbjct: 393 ARKARKVFDRLGSRDTISWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLE 452
Query: 428 AIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSV 487
A AS G L E + H + + + N ++ +I+MYA+CGS+ A +F +++T V
Sbjct: 453 ACASLGRLSEVKALHAQISESELESNVVVTNTLINMYARCGSLEEAERLFAAAKEKT--V 510
Query: 488 SPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKS 547
W A++ + +G L ++ +++ +K + +T+ +L C H G ++ G RYF
Sbjct: 511 VSWTAMVAAFSQYGRYAEALDLFQEMDLEGVKPDDVTYTSILFVCTHGGSLEQGWRYFTD 570
Query: 548 MKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVE 607
M ++ + P H+ MVDLLGR+G+L DA+E++ SMP + D V W T L A RIHG +E
Sbjct: 571 MAELHALAPTADHFAAMVDLLGRSGRLFDAKELLESMPFEPDPVAWMTFLTACRIHGKLE 630
Query: 608 VGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
+GE AA+ + L PS + +SNIYA G WE S+RK+M + G+K+LPG S
Sbjct: 631 LGEAAAERVYELDPSSTAPYIAMSNIYAAHGMWEKVASVRKKMEERGLKKLPGLS 685
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 123/503 (24%), Positives = 232/503 (46%), Gaps = 72/503 (14%)
Query: 9 VFNSQKANLQ-NSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINL 67
+F K +++ NS + ++S S + +G++IH+ I +G +++ + +LIN+
Sbjct: 195 IFKEMKCDVKPNSTTYINVISGF---STPEVLPEGRKIHAEIVANGFDTDLVVATALINM 251
Query: 68 YAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMI 127
Y KCG +A+ +FD D V+ N+MI Y+ N +
Sbjct: 252 YGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVLNGDFH--------------------- 290
Query: 128 MGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMID 187
EALE+++ + + G + T S++ + + + + R++H +++ +D
Sbjct: 291 ----------EALELYQKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLD 340
Query: 188 GFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGL---VELARELF 244
V ++T L+NMY C SL EAR +F+ MK R+ V+W+ ++ +A G AR++F
Sbjct: 341 SEVAVATALVNMYAKCGSLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVF 400
Query: 245 ERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAML-CDGIAPNDVMIVDLISACGRAMAF 303
+R+ S+D +SW MI Y+Q A+ ++R M G+ P+ V + ++ AC
Sbjct: 401 DRLGSRDTISWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRL 460
Query: 304 GEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGF 363
E +H+ I ++ + + T+I+ YA CG + A F + + SW A++A F
Sbjct: 461 SEVKALHAQISESELESNVVVTNTLINMYARCGSLEEAERLFAAAKEKTVVSWTAMVAAF 520
Query: 364 IRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMV 423
+ G YA+ AL+LF M GVKP+++T
Sbjct: 521 SQYGR-------------------------YAE------ALDLFQEMDLEGVKPDDVTYT 549
Query: 424 SVFCAIASSGTLKEG-RWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRD 482
S+ G+L++G R+ + +++ + AA++D+ + G + A E+ +
Sbjct: 550 SILFVCTHGGSLEQGWRYFTDMAELHALAPTADHFAAMVDLLGRSGRLFDAKELLESMPF 609
Query: 483 RTTSVSPWNAIICGLAMHGDANL 505
V+ W + +HG L
Sbjct: 610 EPDPVA-WMTFLTACRIHGKLEL 631
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 154/639 (24%), Positives = 278/639 (43%), Gaps = 110/639 (17%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+ ++ L CS+ V +G+ +H I S E +T + N+LI++Y KC + A+S+F+S
Sbjct: 8 VTFLTVLCSCSSCGDVVEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSVFES 67
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
D R+ + VS+ +MI +AQN EAL ++
Sbjct: 68 M----------------------DWRQ-------RNVVSWNAMIAAYAQNGHSTEALVLY 98
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
M + G+ + VT SV+ + L + R +H V +D F ++ L+ MY
Sbjct: 99 WRMNLQGLGTDHVTFVSVLGACSSLA---QGREIHNRVFYSGLDSFQSLANALVTMYARF 155
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYL 263
S+ +A+ +F ++ R+ SWN ++ +++G W
Sbjct: 156 GSVGDAKRMFQSLQTRDETSWNAVILAHSQSG------------------DW-------- 189
Query: 264 QVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDF 323
S AL +++ M CD + PN +++IS EG +IH+ IV GFD
Sbjct: 190 -----SGALRIFKEMKCD-VKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDTDLV 243
Query: 324 IQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRD 383
+ +I+ Y CG + AR F+ K + SWN +I ++ NG +
Sbjct: 244 VATALINMYGKCGSSHEAREVFDKMKKRDMVSWNVMIGCYVLNGDFHE------------ 291
Query: 384 VYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHE 443
ALEL+ + G K + T VS+ A +S L +GR H
Sbjct: 292 -------------------ALELYQKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHS 332
Query: 444 YVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHG-- 501
++L + ++ A+++MYAKCGS+ A +VF +++R W+ +I A +G
Sbjct: 333 HILERGLDSEVAVATALVNMYAKCGSLEEARKVFNAMKNR--DAVAWSTLIGAYASNGYG 390
Query: 502 -DANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKH 560
DA K++ L R ++I++ +++T G + F+ M ++PD
Sbjct: 391 KDARKARKVFDRLGSR----DTISWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVT 446
Query: 561 YGCMVDL---LGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLA 617
+ +++ LGR +++ I ++++VV+ TL+ G++E ER A
Sbjct: 447 FIAVLEACASLGRLSEVKALHAQISESELESNVVVTNTLINMYARCGSLEEAERL---FA 503
Query: 618 GLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMK 656
+ S + ++ GR+ +A + +EM G+K
Sbjct: 504 AAKEKTVVSWTAMVAAFSQYGRYAEALDLFQEMDLEGVK 542
Score = 172 bits (436), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 131/498 (26%), Positives = 218/498 (43%), Gaps = 68/498 (13%)
Query: 153 PNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSL 212
P+ VT +V+ S G + E R LH + + ++ L++MY C SLV+ARS+
Sbjct: 5 PDNVTFLTVLCSCSSCGDVVEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSV 64
Query: 213 FDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEAL 272
F+ M R ++VVSW MI Y Q +EAL
Sbjct: 65 FESMDWRQ-----------------------------RNVVSWNAMIAAYAQNGHSTEAL 95
Query: 273 TMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFY 332
+Y M G+ + V V ++ AC + +G +IH+ + +G D + +
Sbjct: 96 VLYWRMNLQGLGTDHVTFVSVLGACS---SLAQGREIHNRVFYSGLDSFQSLA------- 145
Query: 333 AACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMIS 392
NAL+ + R G + DA+++F ++Q RD SW+A+I
Sbjct: 146 ------------------------NALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVIL 181
Query: 393 GYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITL 452
++Q+ + AL +F M VKPN T ++V ++ L EGR H ++ N
Sbjct: 182 AHSQSGDWSGALRIFKEM-KCDVKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDT 240
Query: 453 NDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSD 512
+ ++ A+I+MY KCGS + A EVF ++ R + WN +I ++GD + L++Y
Sbjct: 241 DLVVATALINMYGKCGSSHEAREVFDKMKKR--DMVSWNVMIGCYVLNGDFHEALELYQK 298
Query: 513 LEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAG 572
L+ K TF+ +L C + G R S ++ ++ +V++ + G
Sbjct: 299 LDMEGFKRTKATFVSILGACSSVKALAQG-RLVHSHILERGLDSEVAVATALVNMYAKCG 357
Query: 573 QLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSN 632
LE+A +V +M + D V W TL+ A +G + +A K L S +
Sbjct: 358 SLEEARKVFNAMKNR-DAVAWSTLIGAYASNGYGKDARKARKVFDRLGSRDTISWNAMIT 416
Query: 633 IYADAGRWEDAFSIRKEM 650
Y G A I +EM
Sbjct: 417 TYVQNGCAVAAMKIFREM 434
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 93/195 (47%), Gaps = 15/195 (7%)
Query: 416 KPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFE 475
+P+ +T ++V C+ +S G + EGR HE + + + + A+I MY KC S+ A
Sbjct: 4 QPDNVTFLTVLCSCSSCGDVVEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARS 63
Query: 476 VFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCH- 534
VF + R +V WNA+I A +G + L +Y + + + + +TF+ VL C
Sbjct: 64 VFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSSL 123
Query: 535 AGLVDLGERYF----KSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADV 590
A ++ R F S +S+ N +V + R G + DA+ + +S+ + D
Sbjct: 124 AQGREIHNRVFYSGLDSFQSLANA---------LVTMYARFGSVGDAKRMFQSLQTR-DE 173
Query: 591 VIWGTLLAASRIHGN 605
W ++ A G+
Sbjct: 174 TSWNAVILAHSQSGD 188
>gi|357123666|ref|XP_003563529.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Brachypodium distachyon]
Length = 742
Score = 340 bits (872), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 198/635 (31%), Positives = 338/635 (53%), Gaps = 38/635 (5%)
Query: 38 AVSQGQQIHSLIFKSGL----ESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACN 93
+V Q ++H+++ SG S + + NSL+N + + DP+
Sbjct: 11 SVRQAAELHAVLVASGRLLHPPSASHLLNSLVNCF----------------TPTDPL--- 51
Query: 94 IMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIP 153
L A +FD+ P + T++ F + L ++R MR GV
Sbjct: 52 ----------HLRYALCLFDRMPCSTFLFDTALRACFRASSGPESPLILYRRMRRTGVCT 101
Query: 154 NEVTLASVISSSVH-LGGIWECRMLHGLVIKLMIDGFV-IISTNLLNMYCVCSSLVEARS 211
+ T + + C+MLH + M+ V ++S +++MY +AR
Sbjct: 102 DAFTFHFLFKCCARGRAHVLLCQMLHAACFRTMLPSAVPLVSNPIIHMYVELGLAGDARR 161
Query: 212 LFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEA 271
FD++ ++ V+W +++G AK GL++ A L P+++V+SW +I GY + R +EA
Sbjct: 162 AFDDIPVKDAVAWTTVISGLAKLGLLDDAWCLLRHSPARNVISWTGLISGYSRAGRAAEA 221
Query: 272 LTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHF 331
+ + +ML DGI P++V ++ L+SAC + G +H ++ + G + +I
Sbjct: 222 VDCFNSMLSDGIEPDEVTVIGLLSACAQLKDLVFGRSLHKLVGEKGMLMSGKLVVALIDM 281
Query: 332 YAACGRINLARLQFE-LGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAM 390
YA CG I A F+ LG SWNA+I G+ + G ++ AR LF+ M+ RD+ +++++
Sbjct: 282 YAKCGDIGRAWEVFDALGRGRRPQSWNAMIDGYCKLGHVDVARYLFDQMEDRDLVTFNSL 341
Query: 391 ISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSI 450
I+GY + AL LF M ++ + TMVS+ A AS G L +GR H + +
Sbjct: 342 ITGYIHGGRLREALLLFMQMRRHDLRADNFTMVSLLTACASLGALPQGRALHACIEQRLV 401
Query: 451 TLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIY 510
++ L A++DMY KCG + A VF + R V W+A+I GLA +G L+ +
Sbjct: 402 EVDIYLGTALLDMYLKCGRVEEASLVFQAMSVR--DVHTWSAMIAGLAFNGMGKAALEYF 459
Query: 511 SDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGR 570
++ + NS+T+I +L+ C H+ L+D G YF+ M+ ++N+ P ++HYGCM+DLLGR
Sbjct: 460 FWMKVDGFQPNSVTYIAILTACSHSCLLDEGRLYFEEMRLLHNIRPLIEHYGCMIDLLGR 519
Query: 571 AGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLL 630
+G L++A +++R+MPM+ + VIW ++L+A R+H + + AA+ L L+P V L
Sbjct: 520 SGLLDEAMDLVRTMPMQPNAVIWASILSACRVHKDANLARNAAEHLLKLEPDEDAVYVQL 579
Query: 631 SNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGVV 665
NIY D+ +WEDA IR+ M + G+K+ G+S +
Sbjct: 580 YNIYIDSRQWEDASQIRRLMEERGVKKAAGYSSIT 614
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 93/396 (23%), Positives = 176/396 (44%), Gaps = 64/396 (16%)
Query: 10 FNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYA 69
FNS ++ D E+ ++ L C+ + G+ +H L+ + G+ + + +LI++YA
Sbjct: 225 FNSMLSDGIEPD-EVTVIGLLSACAQLKDLVFGRSLHKLVGEKGMLMSGKLVVALIDMYA 283
Query: 70 KCGLISQAKSMFDSCST-LDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIM 128
KCG I +A +FD+ P + N MI GY + ++ AR +FD+ + V++ S+I
Sbjct: 284 KCGDIGRAWEVFDALGRGRRPQSWNAMIDGYCKLGHVDVARYLFDQMEDRDLVTFNSLIT 343
Query: 129 GFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDG 188
G+ REAL +F MR + + T+ S++++ LG + + R LH + + +++
Sbjct: 344 GYIHGGRLREALLLFMQMRRHDLRADNFTMVSLLTACASLGALPQGRALHACIEQRLVEV 403
Query: 189 FVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIP 248
+ + T LL+MY C + EA +F M R++ +W+ M+ G A G+ + A E F
Sbjct: 404 DIYLGTALLDMYLKCGRVEEASLVFQAMSVRDVHTWSAMIAGLAFNGMGKAALEYF---- 459
Query: 249 SKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQ 308
W M DG PN V + +++AC + E
Sbjct: 460 -----FW----------------------MKVDGFQPNSVTYIAILTACSHSCLLDE--- 489
Query: 309 IHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGM 368
GR+ ++ I+ I + +I R+G+
Sbjct: 490 ---------------------------GRLYFEEMRLLHNIRPLIEHYGCMIDLLGRSGL 522
Query: 369 IEDARQLFNNMQ-KRDVYSWSAMISGYAQNEQPNMA 403
+++A L M + + W++++S ++ N+A
Sbjct: 523 LDEAMDLVRTMPMQPNAVIWASILSACRVHKDANLA 558
>gi|225445386|ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 711
Score = 340 bits (872), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 197/601 (32%), Positives = 315/601 (52%), Gaps = 73/601 (12%)
Query: 70 KCGLISQAKS----MFDSCSTLDPVACNIMISGYIRNDR--LNDAREVFDKTPIKCCVSY 123
KC +SQ K M +C +DP + + +++ +D L AR VF++ P +
Sbjct: 49 KCTTMSQLKQIHAQMLRTCLFVDPFSASKIVAFCALHDSGSLPYARLVFNQIPNPTTFTC 108
Query: 124 TSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIK 183
S+I G+ + R+A+ ++ M + G+ P+ T S+ S G + E + LH K
Sbjct: 109 NSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLFKSC---GVLCEGKQLHCHSTK 165
Query: 184 LMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELAREL 243
L I L+NMY C LV A R++
Sbjct: 166 LGFASDAYIQNTLMNMYSNCGCLVSA-------------------------------RKV 194
Query: 244 FERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAF 303
F+++ +K VVSW TMI Y Q + EA+ ++R M + PN++ +V++++AC R+
Sbjct: 195 FDKMVNKSVVSWATMIGAYAQWDLPHEAIKLFRRMEIASVKPNEITLVNVLTACARSRDL 254
Query: 304 GEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGF 363
Q+H I + G + + + ++ Y CG LA
Sbjct: 255 ETAKQVHKYIDETGIGFHTVLTSALMDVYCKCGCYPLA---------------------- 292
Query: 364 IRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMV 423
R LFN M +++++ W+ MI+G+ ++ AL LF+ M +GVK +++TM
Sbjct: 293 ---------RDLFNKMPEKNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMA 343
Query: 424 SVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDR 483
S+ A G L+ G+W H Y+ I ++ L A++DMYAKCGSI +A VF + ++
Sbjct: 344 SLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEK 403
Query: 484 TTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGER 543
V W A+I GLAM G L+++ +++ +K ++ITF+GVL+ C HAGLV+ G
Sbjct: 404 --DVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHAGLVNEGIA 461
Query: 544 YFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIH 603
YF SM + Y ++P ++HYGCMVD+LGRAG++ +AE++I++MPM D + LL+A RIH
Sbjct: 462 YFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYFVLVGLLSACRIH 521
Query: 604 GNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSG 663
GN+ V ERAA+ L L P +G + VLLSNIY+ WE A +R+ M + +K+ PG S
Sbjct: 522 GNLVVAERAAQQLIELDPKNGGTYVLLSNIYSSMKNWEAAKKMRELMVERNIKKPPGCSA 581
Query: 664 V 664
+
Sbjct: 582 I 582
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 110/435 (25%), Positives = 183/435 (42%), Gaps = 96/435 (22%)
Query: 41 QGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYI 100
+G+Q+H K G S+ +IQN+L+N+Y+ CG
Sbjct: 155 EGKQLHCHSTKLGFASDAYIQNTLMNMYSNCGC--------------------------- 187
Query: 101 RNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLAS 160
L AR+VFDK K VS+ +MI +AQ D EA+++FR M I V PNE+TL +
Sbjct: 188 ----LVSARKVFDKMVNKSVVSWATMIGAYAQWDLPHEAIKLFRRMEIASVKPNEITLVN 243
Query: 161 VISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERN 220
V+++ + + +H + + I ++++ L+++YC C
Sbjct: 244 VLTACARSRDLETAKQVHKYIDETGIGFHTVLTSALMDVYCKC----------------- 286
Query: 221 IVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLC 280
G LAR+LF ++P K++ W MI+G+++ EAL+++ M
Sbjct: 287 --------------GCYPLARDLFNKMPEKNLFCWNIMINGHVEDSDYEEALSLFNEMQL 332
Query: 281 DGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINL 340
G+ + V + L+ AC A G +H I K + + ++ YA CG I
Sbjct: 333 SGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIES 392
Query: 341 ARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQP 400
A F+ + + +W ALI G G A +LF+ MQ +
Sbjct: 393 AMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSE----------------- 435
Query: 401 NMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLS--A 458
VKP+ IT V V A + +G + EG A+ + N + ++
Sbjct: 436 --------------VKPDAITFVGVLAACSHAGLVNEG-IAYFNSMPNKYGIQPSIEHYG 480
Query: 459 AIIDMYAKCGSINTA 473
++DM + G I A
Sbjct: 481 CMVDMLGRAGRIAEA 495
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 142/315 (45%), Gaps = 74/315 (23%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E+ LV+ L C+ + +Q+H I ++G+ +T + ++L+++Y KCG A+ +F+
Sbjct: 238 EITLVNVLTACARSRDLETAKQVHKYIDETGIGFHTVLTSALMDVYCKCGCYPLARDLFN 297
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+ NIMI+G++ + + EAL +
Sbjct: 298 KMPEKNLFCWNIMINGHVEDSD-------------------------------YEEALSL 326
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
F +M++ GV ++VT+AS++ + HLG + + LH + K I+ V + T L++MY
Sbjct: 327 FNEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAK 386
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFA------------------------------ 232
C S+ A +F EM E+++++W ++ G A
Sbjct: 387 CGSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGV 446
Query: 233 -----KAGLVELARELFERIPSK-----DVVSWGTMIDGYLQVERLSEALTMYRAMLCDG 282
AGLV F +P+K + +G M+D + R++EA + + M
Sbjct: 447 LAACSHAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNM---P 503
Query: 283 IAPNDVMIVDLISAC 297
+AP+ ++V L+SAC
Sbjct: 504 MAPDYFVLVGLLSAC 518
>gi|225445374|ref|XP_002281645.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
chloroplastic-like [Vitis vinifera]
Length = 858
Score = 340 bits (872), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 207/679 (30%), Positives = 344/679 (50%), Gaps = 105/679 (15%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
L + L+ C + + G+ +H + K G + F+ +SL+++Y KCG+
Sbjct: 183 FVLPNVLKACGSLQLIGLGKGVHGYVLKMGFGACVFVSSSLVDMYGKCGV---------- 232
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
L DAR+VFD K V++ SMI+G+ QN +EA++VF
Sbjct: 233 ---------------------LEDARKVFDSMVEKNVVTWNSMIVGYVQNGLNQEAIDVF 271
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
DMR+ G+ P VT+AS +S+S +L + E + H + I +D I+ ++++N Y
Sbjct: 272 YDMRVEGIEPTRVTVASFLSASANLDALIEGKQGHAIAILNSLDLDNILGSSIINFY--- 328
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYL 263
+K GL+E A +F R+ KDVV+W +I Y+
Sbjct: 329 ----------------------------SKVGLIEDAELVFSRMLEKDVVTWNLLISSYV 360
Query: 264 QVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDF 323
Q ++ +AL M M + + + V + ++SA G + H ++ +
Sbjct: 361 QHHQVGKALNMCHLMRSENLRFDSVTLSSILSASAVTSNIKLGKEGHCYCIRRNLESDVV 420
Query: 324 IQATIIHFYAACGRINLAR------------------------------------LQFEL 347
+ +II YA C RI+ AR +QF+
Sbjct: 421 VANSIIDMYAKCERIDDARKVFDSTTERDLVLWNTLLAAYAQVGLSGEALKLFYQMQFD- 479
Query: 348 GIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ----KRDVYSWSAMISGYAQNEQPNMA 403
+ ++ SWN++I GF+RNG + +A+ +F+ MQ + ++ +W+ +ISG AQ+ A
Sbjct: 480 SVPPNVISWNSVILGFLRNGQVNEAKDMFSQMQSLGFQPNLITWTTLISGLAQSGFGYEA 539
Query: 404 LELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDM 463
+ F M +AG++P+ ++ SV A +L GR H ++ + L+ ++ +++DM
Sbjct: 540 ILFFQKMQEAGIRPSIASITSVLLACTDIPSLWYGRAIHGFITRHEFCLSVPVATSLVDM 599
Query: 464 YAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSI 523
YAKCGSI+ A +VF+ + + + +NA+I A+HG A L ++ L+K I+ +SI
Sbjct: 600 YAKCGSIDEAKKVFHMMSSKELPI--YNAMISAYALHGQAVEALALFKHLQKEGIEPDSI 657
Query: 524 TFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRS 583
TF +LS C HAGLV+ G F M S +N+ P ++HYGC+V LL R G L++A +I +
Sbjct: 658 TFTSILSACSHAGLVNEGLNLFADMVSKHNMNPIMEHYGCVVSLLSRCGNLDEALRLILT 717
Query: 584 MPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDA 643
MP + D I G+LL A R H +E+GE +K L L+PS+ + V LSN YA AGRW +
Sbjct: 718 MPFQPDAHILGSLLTACREHHEIELGEYLSKHLFKLEPSNSGNYVALSNAYAAAGRWVEV 777
Query: 644 FSIRKEMRDCGMKRLPGFS 662
++R M+ G+++ PG S
Sbjct: 778 SNMRDLMKVRGLRKNPGCS 796
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 141/548 (25%), Positives = 241/548 (43%), Gaps = 104/548 (18%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSG--LESNTFIQNSLINLYAKCGLISQAKSMFDSCSTL 87
L+ C A+ GQQIH+ I K+G N +++ L+ YAKC A +F
Sbjct: 86 LQGCVYERALHTGQQIHARILKNGDFFAKNEYVETKLVVFYAKCDFPEVAVRLFH----- 140
Query: 88 DPVACNIMISGYIRNDRLNDAREVFDKTPI---KCCVSYTSMIMGFAQNDCWREALEVFR 144
RL R VF I +C MGF++ +AL F
Sbjct: 141 ----------------RLR-VRNVFSWAAIVGLQC-------RMGFSE-----DALLGFI 171
Query: 145 DMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCS 204
+M+ GV P+ L +V+ + L I + +HG V+K+ V +S++L++MY C
Sbjct: 172 EMQENGVFPDNFVLPNVLKACGSLQLIGLGKGVHGYVLKMGFGACVFVSSSLVDMYGKCG 231
Query: 205 SLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQ 264
L +AR +FD M E+N+V+WN M+ G+ + GL +
Sbjct: 232 VLEDARKVFDSMVEKNVVTWNSMIVGYVQNGLNQ-------------------------- 265
Query: 265 VERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFI 324
EA+ ++ M +GI P V + +SA A EG Q H+I + D + +
Sbjct: 266 -----EAIDVFYDMRVEGIEPTRVTVASFLSASANLDALIEGKQGHAIAILNSLDLDNIL 320
Query: 325 QATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDV 384
++II+FY+ G I A L F ++ + +WN L
Sbjct: 321 GSSIINFYSKVGLIEDAELVFSRMLEKDVVTWNLL------------------------- 355
Query: 385 YSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEY 444
IS Y Q+ Q AL + H M ++ + +T+ S+ A A + +K G+ H Y
Sbjct: 356 ------ISSYVQHHQVGKALNMCHLMRSENLRFDSVTLSSILSASAVTSNIKLGKEGHCY 409
Query: 445 VLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDAN 504
+ ++ + ++ +IIDMYAKC I+ A +VF +R + WN ++ A G +
Sbjct: 410 CIRRNLESDVVVANSIIDMYAKCERIDDARKVFDSTTERDLVL--WNTLLAAYAQVGLSG 467
Query: 505 LTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCM 564
LK++ ++ ++ N I++ V+ G V+ + F M+S+ +P+L + +
Sbjct: 468 EALKLFYQMQFDSVPPNVISWNSVILGFLRNGQVNEAKDMFSQMQSL-GFQPNLITWTTL 526
Query: 565 VDLLGRAG 572
+ L ++G
Sbjct: 527 ISGLAQSG 534
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 104/431 (24%), Positives = 204/431 (47%), Gaps = 44/431 (10%)
Query: 231 FAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMI 290
+AK E+A LF R+ ++V SW ++ ++ +AL + M +G+ P++ ++
Sbjct: 126 YAKCDFPEVAVRLFHRLRVRNVFSWAAIVGLQCRMGFSEDALLGFIEMQENGVFPDNFVL 185
Query: 291 VDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIK 350
+++ ACG G G +H ++K GF F+ ++++ Y CG + AR F+ ++
Sbjct: 186 PNVLKACGSLQLIGLGKGVHGYVLKMGFGACVFVSSSLVDMYGKCGVLEDARKVFDSMVE 245
Query: 351 DHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGM 410
++ +WN++I G+++NG+ ++ A+++F+ M
Sbjct: 246 KNVVTWNSMIVGYVQNGLNQE-------------------------------AIDVFYDM 274
Query: 411 VDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSI 470
G++P +T+ S A A+ L EG+ H + NS+ L++ L ++II+ Y+K G I
Sbjct: 275 RVEGIEPTRVTVASFLSASANLDALIEGKQGHAIAILNSLDLDNILGSSIINFYSKVGLI 334
Query: 471 NTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLS 530
A VF + ++ V WN +I H L + + N++ +S+T +LS
Sbjct: 335 EDAELVFSRMLEK--DVVTWNLLISSYVQHHQVGKALNMCHLMRSENLRFDSVTLSSILS 392
Query: 531 TCCHAGLVDLG-ERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKAD 589
+ LG E + ++ N+E D+ ++D+ + +++DA +V S + D
Sbjct: 393 ASAVTSNIKLGKEGHCYCIRR--NLESDVVVANSIIDMYAKCERIDDARKVFDSTTER-D 449
Query: 590 VVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNI----YADAGRWEDAFS 645
+V+W TLLAA + V + A K +Q P V+ N + G+ +A
Sbjct: 450 LVLWNTLLAA---YAQVGLSGEALKLFYQMQFDSVPPNVISWNSVILGFLRNGQVNEAKD 506
Query: 646 IRKEMRDCGMK 656
+ +M+ G +
Sbjct: 507 MFSQMQSLGFQ 517
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/349 (23%), Positives = 154/349 (44%), Gaps = 42/349 (12%)
Query: 260 DGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAG-- 317
DG+LQ E++ + M + + +L+ C A G QIH+ I+K G
Sbjct: 57 DGHLQ-----ESVHLLSEMEFEDFQIGPEIYGELLQGCVYERALHTGQQIHARILKNGDF 111
Query: 318 FDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFN 377
F ++++ ++ FYA C E A +LF+
Sbjct: 112 FAKNEYVETKLVVFYAKCD-------------------------------FPEVAVRLFH 140
Query: 378 NMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKE 437
++ R+V+SW+A++ + AL F M + GV P+ + +V A S +
Sbjct: 141 RLRVRNVFSWAAIVGLQCRMGFSEDALLGFIEMQENGVFPDNFVLPNVLKACGSLQLIGL 200
Query: 438 GRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGL 497
G+ H YVL +S++++DMY KCG + A +VF + ++ +V WN++I G
Sbjct: 201 GKGVHGYVLKMGFGACVFVSSSLVDMYGKCGVLEDARKVFDSMVEK--NVVTWNSMIVGY 258
Query: 498 AMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPD 557
+G + ++ D+ I+ +T LS + + G++ ++ + +++ D
Sbjct: 259 VQNGLNQEAIDVFYDMRVEGIEPTRVTVASFLSASANLDALIEGKQG-HAIAILNSLDLD 317
Query: 558 LKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNV 606
+++ + G +EDAE V M ++ DVV W L+++ H V
Sbjct: 318 NILGSSIINFYSKVGLIEDAELVFSRM-LEKDVVTWNLLISSYVQHHQV 365
>gi|395146511|gb|AFN53666.1| hypothetical protein [Linum usitatissimum]
Length = 850
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 196/607 (32%), Positives = 313/607 (51%), Gaps = 40/607 (6%)
Query: 67 LYAKCGLISQAKS----MFDSCSTLDPVACNIMISG--YIRNDRLNDAREVFDKTPIKCC 120
L+ +C Q K M + DP A + + + + L+ AR+VFD+ P
Sbjct: 145 LFQQCTSFKQLKQIHAQMLRTNKLHDPYAASELFTAAAFSSFSALDYARKVFDQIPQPNL 204
Query: 121 VSYTSMIMGFA-QNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHG 179
S+ +I A +D + L R + PN+ T +I + + +HG
Sbjct: 205 YSWNILIRALATSSDPIQSVLVFIRMLHDSPFGPNKFTFPVLIKAVAERRCFLVGKAVHG 264
Query: 180 LVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVEL 239
+ IK V + +L++ Y C L A +F EM E N
Sbjct: 265 MAIKTSFGDDVFVLNSLIHFYASCGHLDLAYLVF-EMIEGN------------------- 304
Query: 240 ARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGR 299
+KD+VSW +M+ G++Q +AL ++ M +G+ PN V +V ++SAC +
Sbjct: 305 ---------NKDIVSWNSMVTGFVQGGYPDKALDLFERMRNEGVHPNAVTMVSVMSACAK 355
Query: 300 AMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNAL 359
M G ++ I + + I + CG + +AR F+ K + SW +
Sbjct: 356 TMNLTLGRKVCDYIDRNEMMMNLNVCNATIDMFVKCGEVEIARGLFDNMEKRDVVSWTTI 415
Query: 360 IAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFH--GMVDAGVKP 417
I G+ + AR +F++M ++D+ +W+ +ISGY Q+ +P AL +F + +G +P
Sbjct: 416 IDGYAKMSEHGIARDIFDSMPRKDIPAWNVLISGYEQSGRPKEALAIFRELQLTKSGARP 475
Query: 418 NEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVF 477
+++T++S A A G + G W H Y+ I LN NL+ ++IDMY+K G + A EVF
Sbjct: 476 DQVTLLSTLSACAQLGAMDIGEWIHGYIKKERIQLNRNLATSLIDMYSKSGDVEKAIEVF 535
Query: 478 YHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGL 537
+ I ++ V W+A+I GLAMHG ++++ D+++ +K NS+TF +L C H+GL
Sbjct: 536 HSIGNKDVFV--WSAMIAGLAMHGRGEAAIELFLDMQETQVKPNSVTFTNLLCACSHSGL 593
Query: 538 VDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLL 597
VD G+R F M+ VY V P KHY CMVD+LGRAG LE+A + I MP+ +WG LL
Sbjct: 594 VDEGKRLFDEMERVYGVVPKTKHYSCMVDVLGRAGHLEEALKFIEGMPLAPSASVWGALL 653
Query: 598 AASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKR 657
A IHGN+E+ E+A L ++P + + VLLSN+YA G WE +R++MRD G+K+
Sbjct: 654 GACCIHGNLELAEKACSRLLEIEPGNHGAYVLLSNLYAKTGDWEGVSELRQQMRDSGLKK 713
Query: 658 LPGFSGV 664
G S +
Sbjct: 714 ETGCSSI 720
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 134/475 (28%), Positives = 226/475 (47%), Gaps = 64/475 (13%)
Query: 42 GQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIR 101
G+ +H + K+ + F+ NSLI+ YA CG + A +F+ MI G +
Sbjct: 259 GKAVHGMAIKTSFGDDVFVLNSLIHFYASCGHLDLAYLVFE------------MIEGNNK 306
Query: 102 NDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASV 161
+ VS+ SM+ GF Q +AL++F MR GV PN VT+ SV
Sbjct: 307 D-----------------IVSWNSMVTGFVQGGYPDKALDLFERMRNEGVHPNAVTMVSV 349
Query: 162 ISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNI 221
+S+ + R + + + + + + ++M+ C + AR LFD M++R++
Sbjct: 350 MSACAKTMNLTLGRKVCDYIDRNEMMMNLNVCNATIDMFVKCGEVEIARGLFDNMEKRDV 409
Query: 222 VSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLC- 280
VSW +++G+AK +AR++F+ +P KD+ +W +I GY Q R EAL ++R +
Sbjct: 410 VSWTTIIDGYAKMSEHGIARDIFDSMPRKDIPAWNVLISGYEQSGRPKEALAIFRELQLT 469
Query: 281 -DGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRIN 339
G P+ V ++ +SAC + A G IH I K RI
Sbjct: 470 KSGARPDQVTLLSTLSACAQLGAMDIGEWIHGYIKKE--------------------RIQ 509
Query: 340 LARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQ 399
L R ++A+ +LI + ++G +E A ++F+++ +DV+ WSAMI+G A + +
Sbjct: 510 LNR---------NLAT--SLIDMYSKSGDVEKAIEVFHSIGNKDVFVWSAMIAGLAMHGR 558
Query: 400 PNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG-RWAHEYVLNNSITLNDNLSA 458
A+ELF M + VKPN +T ++ CA + SG + EG R E + +
Sbjct: 559 GEAAIELFLDMQETQVKPNSVTFTNLLCACSHSGLVDEGKRLFDEMERVYGVVPKTKHYS 618
Query: 459 AIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDL 513
++D+ + G + A + F S S W A++ +HG+ L K S L
Sbjct: 619 CMVDVLGRAGHLEEALK-FIEGMPLAPSASVWGALLGACCIHGNLELAEKACSRL 672
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 121/223 (54%), Gaps = 2/223 (0%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+ +VS + C+ + ++ G+++ I ++ + N + N+ I+++ KCG + A+ +FD+
Sbjct: 344 VTMVSVMSACAKTMNLTLGRKVCDYIDRNEMMMNLNVCNATIDMFVKCGEVEIARGLFDN 403
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
D V+ +I GY + AR++FD P K ++ +I G+ Q+ +EAL +F
Sbjct: 404 MEKRDVVSWTTIIDGYAKMSEHGIARDIFDSMPRKDIPAWNVLISGYEQSGRPKEALAIF 463
Query: 144 RDMRIL--GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYC 201
R++++ G P++VTL S +S+ LG + +HG + K I ++T+L++MY
Sbjct: 464 RELQLTKSGARPDQVTLLSTLSACAQLGAMDIGEWIHGYIKKERIQLNRNLATSLIDMYS 523
Query: 202 VCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELF 244
+ +A +F + +++ W+ M+ G A G E A ELF
Sbjct: 524 KSGDVEKAIEVFHSIGNKDVFVWSAMIAGLAMHGRGEAAIELF 566
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 110/237 (46%), Gaps = 19/237 (8%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
++ L+S L C+ A+ G+ IH I K ++ N + SLI++Y+K G + +A +F
Sbjct: 477 QVTLLSTLSACAQLGAMDIGEWIHGYIKKERIQLNRNLATSLIDMYSKSGDVEKAIEVFH 536
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVF---DKTPIKC-CVSYTSMIMGFAQNDCWRE 138
S D + MI+G + R A E+F +T +K V++T+++ + + E
Sbjct: 537 SIGNKDVFVWSAMIAGLAMHGRGEAAIELFLDMQETQVKPNSVTFTNLLCACSHSGLVDE 596
Query: 139 ALEVFRDM-RILGVIPNEVTLASVISSSVHLGGIWEC-RMLHGLVIKL------MIDGFV 190
+F +M R+ GV+P + ++ G + E + + G+ + + G
Sbjct: 597 GKRLFDEMERVYGVVPKTKHYSCMVDVLGRAGHLEEALKFIEGMPLAPSASVWGALLGAC 656
Query: 191 IISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERI 247
I NL CS L+ E++ N ++ ++ N +AK G E EL +++
Sbjct: 657 CIHGNLELAEKACSRLL-------EIEPGNHGAYVLLSNLYAKTGDWEGVSELRQQM 706
>gi|168056582|ref|XP_001780298.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668246|gb|EDQ54857.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 986
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 202/642 (31%), Positives = 328/642 (51%), Gaps = 96/642 (14%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
++A VS LR C+ A+ QG+++H+ + + G ++ ++ +++++Y KCG
Sbjct: 312 KVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCG---------- 361
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+ DA EVFD + VS+T+MI GFAQ+ EA
Sbjct: 362 ---------------------SMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLF 400
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
F M G+ PN VT S++ + + + + +I+ + T LL+MY
Sbjct: 401 FNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAK 460
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
C SL +A +FE+I ++VV+W MI Y
Sbjct: 461 CGSLKDAH-------------------------------RVFEKISKQNVVAWNAMITAY 489
Query: 263 LQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD 322
+Q E+ AL ++A+L +GI PN +++ C + + G +H +I+KAG
Sbjct: 490 VQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAG----- 544
Query: 323 FIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKR 382
L+ +L H++ NAL++ F+ G + A+ LFN+M KR
Sbjct: 545 --------------------LESDL----HVS--NALVSMFVNCGDLMSAKNLFNDMPKR 578
Query: 383 DVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAH 442
D+ SW+ +I+G+ Q+ + +A + F M ++G+KP++IT + A AS L EGR H
Sbjct: 579 DLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRRLH 638
Query: 443 EYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGD 502
+ + + + +I MY KCGSI A +VF+ + + +V W ++I G A HG
Sbjct: 639 ALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKK--NVYSWTSMITGYAQHGR 696
Query: 503 ANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYG 562
L+++ +++ +K + ITF+G LS C HAGL++ G +F+SMK +N+EP ++HYG
Sbjct: 697 GKEALELFYQMQQEGVKPDWITFVGALSACAHAGLIEEGLHHFQSMKE-FNIEPRMEHYG 755
Query: 563 CMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPS 622
CMVDL GRAG L +A E I M ++ D +WG LL A ++H NVE+ E+AA+ L P+
Sbjct: 756 CMVDLFGRAGLLNEAVEFIIKMQVEPDSRVWGALLGACQVHLNVELAEKAAQKKLELDPN 815
Query: 623 HGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
V+LSNIYA AG W++ +RK M D G+ + PG S +
Sbjct: 816 DNGVFVILSNIYAAAGMWKEVAKMRKVMLDRGVVKKPGQSWI 857
Score = 231 bits (590), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 158/603 (26%), Positives = 276/603 (45%), Gaps = 101/603 (16%)
Query: 22 YELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMF 81
Y + L+ C + G++I++ I KSG++ + F+ N+LIN+YAKCG AK +F
Sbjct: 109 YRQTYSALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMWNTLINMYAKCGNTISAKQIF 168
Query: 82 DSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALE 141
D D RE K S+ ++ G+ Q+ + EA +
Sbjct: 169 D------------------------DMRE-------KDVYSWNLLLGGYVQHGLYEEAFK 197
Query: 142 VFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYC 201
+ M V P++ T S++++ + + R L+ L++K D + + T L+NM+
Sbjct: 198 LHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHI 257
Query: 202 VCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDG 261
C + +A +FD + R++V+W M+ G A+ G
Sbjct: 258 KCGDIGDATKVFDNLPTRDLVTWTSMITGLARHG-------------------------- 291
Query: 262 YLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCY 321
R +A +++ M +G+ P+ V V L+ AC A +G ++H+ + + G+D
Sbjct: 292 -----RFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTE 346
Query: 322 DFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQK 381
++ I+ Y CG + A F+L ++ SW A+IAGF ++G I++A FN
Sbjct: 347 IYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNK--- 403
Query: 382 RDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWA 441
M+++G++PN +T +S+ A +S LK G+
Sbjct: 404 ----------------------------MIESGIEPNRVTFMSILGACSSPSALKRGQQI 435
Query: 442 HEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHG 501
++++ +D + A++ MYAKCGS+ A VF I + +V WNA+I H
Sbjct: 436 QDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQ--NVVAWNAMITAYVQHE 493
Query: 502 DANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGER-YFKSMKSVYNVEPDLKH 560
+ L + L K IK NS TF +L+ C + ++LG+ +F MK+ +E DL
Sbjct: 494 QYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKA--GLESDLHV 551
Query: 561 YGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSL--AG 618
+V + G L A+ + MP K D+V W T++A HG +V K + +G
Sbjct: 552 SNALVSMFVNCGDLMSAKNLFNDMP-KRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESG 610
Query: 619 LQP 621
++P
Sbjct: 611 IKP 613
>gi|225453947|ref|XP_002274056.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
chloroplastic-like [Vitis vinifera]
Length = 635
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 204/546 (37%), Positives = 303/546 (55%), Gaps = 45/546 (8%)
Query: 123 YTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVI 182
+ ++I F+ + REA +F M GV ++ + + V+ + LG I E +HGL+
Sbjct: 90 WNAIIKSFSHGEDPREAFVIFNLMLENGVCVDKFSFSLVLKACSRLGLIKEGMQIHGLLG 149
Query: 183 KLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARE 242
++ I V + L+ +Y C L AR LFD M +R+ VS+N M++G+ K G+V+ ARE
Sbjct: 150 RMEIGSDVFLQNCLMCLYLRCGCLGIARQLFDRMMKRDSVSFNSMIDGYVKHGMVKSARE 209
Query: 243 LFERIP--SKDVVSWGTMIDGYLQVER-LSEALTMYRAMLCDGIAPNDVMIVDLISACGR 299
LF+ +P K+++SW +MI GY + E L A ++ M P DLIS
Sbjct: 210 LFDVMPMEQKNLISWNSMISGYARSEEGLRVAWELFEEM------PKR----DLIS---- 255
Query: 300 AMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNAL 359
++I CG++ A F K + SW +
Sbjct: 256 -------------------------WNSMIDGCVKCGKMENAHHLFNQMPKRDVVSWANM 290
Query: 360 IAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVD-AGVKPN 418
+ G+ + G I+ AR LF+ M +RDV S +AM++GY QN AL FH M+ + P+
Sbjct: 291 VDGYAKLGEIDIARGLFDEMPERDVISCNAMMAGYVQNGHLMEALNFFHDMLSRKELFPD 350
Query: 419 EITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFY 478
T++ AIA G EG H Y+ +N +L++ L A+IDMYAKCGSI+ A VF
Sbjct: 351 NATLLITLSAIAQLGHFDEGVALHCYIEDNGFSLSEKLGVALIDMYAKCGSIDNALSVFE 410
Query: 479 HIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLV 538
I D+ S+ WNAII GLA+HG + +++ ++EK +K + ITFIGVL+ C HAGLV
Sbjct: 411 DIDDK--SIDHWNAIIGGLAIHGLGEVAFELFMEMEKLFVKPDDITFIGVLNACNHAGLV 468
Query: 539 DLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLA 598
G F+ M+ V+ VEP L+HYGCMVD+LGRAG +E+A++ + MP++ + V+W TLL+
Sbjct: 469 KEGLMCFELMRRVHKVEPKLQHYGCMVDILGRAGHVEEAKKFVEKMPIEPNDVVWRTLLS 528
Query: 599 ASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRL 658
A R H N +GE AK L + + S VLLSNIYA G W D + IR M+ +K++
Sbjct: 529 ACRNHENFTIGEPVAKHLISVDSYNPSSYVLLSNIYAGFGMWNDVYRIRMMMKQRDLKKI 588
Query: 659 PGFSGV 664
PG S +
Sbjct: 589 PGCSQI 594
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 130/414 (31%), Positives = 201/414 (48%), Gaps = 76/414 (18%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
L+ CS + +G QIH L+ + + S+ F+QN L+ LY +CG + A+ +FD D
Sbjct: 129 LKACSRLGLIKEGMQIHGLLGRMEIGSDVFLQNCLMCLYLRCGCLGIARQLFDRMMKRDS 188
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPI--KCCVSYTSMIMGFAQN-DCWREALEVFRDM 146
V+ N MI GY+++ + ARE+FD P+ K +S+ SMI G+A++ + R A E+F +M
Sbjct: 189 VSFNSMIDGYVKHGMVKSARELFDVMPMEQKNLISWNSMISGYARSEEGLRVAWELFEEM 248
Query: 147 RILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV-CSS 205
+I W MIDG CV C
Sbjct: 249 PKRDLIS------------------WNS----------MIDG------------CVKCGK 268
Query: 206 LVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQV 265
+ A LF++M +R++VSW M++G+AK G +++AR LF+ +P +DV+S M+ GY+Q
Sbjct: 269 MENAHHLFNQMPKRDVVSWANMVDGYAKLGEIDIARGLFDEMPERDVISCNAMMAGYVQN 328
Query: 266 ERLSEALTMYRAMLC-DGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFI 324
L EAL + ML + P++ ++ +SA + F EG+ +H I GF + +
Sbjct: 329 GHLMEALNFFHDMLSRKELFPDNATLLITLSAIAQLGHFDEGVALHCYIEDNGFSLSEKL 388
Query: 325 QATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDV 384
+I YA CG I+ A FE I WNA+I G +G+ E A +LF M+K
Sbjct: 389 GVALIDMYAKCGSIDNALSVFEDIDDKSIDHWNAIIGGLAIHGLGEVAFELFMEMEK--- 445
Query: 385 YSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG 438
LF VKP++IT + V A +G +KEG
Sbjct: 446 ---------------------LF-------VKPDDITFIGVLNACNHAGLVKEG 471
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 87/379 (22%), Positives = 167/379 (44%), Gaps = 71/379 (18%)
Query: 26 LVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCS 85
L+S S + +G ++ +F+ + + NS+I+ KCG + A +F+
Sbjct: 221 LISWNSMISGYARSEEGLRVAWELFEEMPKRDLISWNSMIDGCVKCGKMENAHHLFNQMP 280
Query: 86 TLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRD 145
D V+ M+ GY + ++ AR +FD+ P + +S +M+ G+ QN EAL F D
Sbjct: 281 KRDVVSWANMVDGYAKLGEIDIARGLFDEMPERDVISCNAMMAGYVQNGHLMEALNFFHD 340
Query: 146 M-RILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVI---ISTNLLNMYC 201
M + P+ TL +S+ LG E LH + +GF + + L++MY
Sbjct: 341 MLSRKELFPDNATLLITLSAIAQLGHFDEGVALHCYIED---NGFSLSEKLGVALIDMYA 397
Query: 202 VCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDG 261
C S+ A S+F+++ +++I WN ++ G A GL E+A ELF
Sbjct: 398 KCGSIDNALSVFEDIDDKSIDHWNAIIGGLAIHGLGEVAFELF----------------- 440
Query: 262 YLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCY 321
+++E+L + P+D+ + +++AC H+ +VK G C+
Sbjct: 441 -MEMEKLF-------------VKPDDITFIGVLNACN-----------HAGLVKEGLMCF 475
Query: 322 DFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNM-- 379
+ ++ R++ ++ + + ++ R G +E+A++ M
Sbjct: 476 ELMR-----------RVH--------KVEPKLQHYGCMVDILGRAGHVEEAKKFVEKMPI 516
Query: 380 QKRDVYSWSAMISGYAQNE 398
+ DV W ++S +E
Sbjct: 517 EPNDVV-WRTLLSACRNHE 534
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 119/253 (47%), Gaps = 24/253 (9%)
Query: 368 MIEDARQLF-------NNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEI 420
++E AR LF + ++ + + W+A+I ++ E P A +F+ M++ GV ++
Sbjct: 64 LVEFARYLFMSRHFGRKHRKQDNPFLWNAIIKSFSHGEDPREAFVIFNLMLENGVCVDKF 123
Query: 421 TMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHI 480
+ V A + G +KEG H + I + L ++ +Y +CG + A ++F +
Sbjct: 124 SFSLVLKACSRLGLIKEGMQIHGLLGRMEIGSDVFLQNCLMCLYLRCGCLGIARQLFDRM 183
Query: 481 RDRTTSVSPWNAIICGLAMHGDANLTLKIYS--DLEKRNIKLNSITFIGVLSTCCHAGLV 538
R SVS +N++I G HG +++ +E++N+ I++ ++S +
Sbjct: 184 MKR-DSVS-FNSMIDGYVKHGMVKSARELFDVMPMEQKNL----ISWNSMISGYARS--- 234
Query: 539 DLGERYFKSMKSVYNVEP--DLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTL 596
E + ++ P DL + M+D + G++E+A + MP K DVV W +
Sbjct: 235 ---EEGLRVAWELFEEMPKRDLISWNSMIDGCVKCGKMENAHHLFNQMP-KRDVVSWANM 290
Query: 597 LAASRIHGNVEVG 609
+ G +++
Sbjct: 291 VDGYAKLGEIDIA 303
>gi|54695180|dbj|BAD67155.1| PpPPR_98 [Physcomitrella patens]
Length = 986
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 202/642 (31%), Positives = 328/642 (51%), Gaps = 96/642 (14%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
++A VS LR C+ A+ QG+++H+ + + G ++ ++ +++++Y KCG
Sbjct: 312 KVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCG---------- 361
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+ DA EVFD + VS+T+MI GFAQ+ EA
Sbjct: 362 ---------------------SMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLF 400
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
F M G+ PN VT S++ + + + + +I+ + T LL+MY
Sbjct: 401 FNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAK 460
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
C SL +A +FE+I ++VV+W MI Y
Sbjct: 461 CGSLKDAH-------------------------------RVFEKISKQNVVAWNAMITAY 489
Query: 263 LQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD 322
+Q E+ AL ++A+L +GI PN +++ C + + G +H +I+KAG
Sbjct: 490 VQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAG----- 544
Query: 323 FIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKR 382
L+ +L H++ NAL++ F+ G + A+ LFN+M KR
Sbjct: 545 --------------------LESDL----HVS--NALVSMFVNCGDLMSAKNLFNDMPKR 578
Query: 383 DVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAH 442
D+ SW+ +I+G+ Q+ + +A + F M ++G+KP++IT + A AS L EGR H
Sbjct: 579 DLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRRLH 638
Query: 443 EYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGD 502
+ + + + +I MY KCGSI A +VF+ + + +V W ++I G A HG
Sbjct: 639 ALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKK--NVYSWTSMIAGYAQHGR 696
Query: 503 ANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYG 562
L+++ +++ +K + ITF+G LS C HAGL++ G +F+SMK +N+EP ++HYG
Sbjct: 697 GKEALELFYQMQQEGVKPDWITFVGALSACAHAGLIEEGLHHFQSMKE-FNIEPRMEHYG 755
Query: 563 CMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPS 622
CMVDL GRAG L +A E I M ++ D +WG LL A ++H NVE+ E+AA+ L P+
Sbjct: 756 CMVDLFGRAGLLNEAVEFIIKMQVEPDSRVWGALLGACQVHLNVELAEKAAQKKLELDPN 815
Query: 623 HGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
V+LSNIYA AG W++ +RK M D G+ + PG S +
Sbjct: 816 DNGVFVILSNIYAAAGMWKEVAKMRKVMLDRGVVKKPGQSWI 857
Score = 232 bits (592), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 158/603 (26%), Positives = 277/603 (45%), Gaps = 101/603 (16%)
Query: 22 YELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMF 81
Y + L+ C + G++I++ I KSG++ + F++N+LIN+YAKCG AK +F
Sbjct: 109 YRQTYSALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMRNTLINMYAKCGNTISAKQIF 168
Query: 82 DSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALE 141
D D RE K S+ ++ G+ Q+ + EA +
Sbjct: 169 D------------------------DMRE-------KDVYSWNLLLGGYVQHGLYEEAFK 197
Query: 142 VFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYC 201
+ M V P++ T S++++ + + R L+ L++K D + + T L+NM+
Sbjct: 198 LHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHI 257
Query: 202 VCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDG 261
C + +A +FD + R++V+W M+ G A+ G
Sbjct: 258 KCGDIGDATKVFDNLPTRDLVTWTSMITGLARHG-------------------------- 291
Query: 262 YLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCY 321
R +A +++ M +G+ P+ V V L+ AC A +G ++H+ + + G+D
Sbjct: 292 -----RFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTE 346
Query: 322 DFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQK 381
++ I+ Y CG + A F+L ++ SW A+IAGF ++G I++A FN
Sbjct: 347 IYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNK--- 403
Query: 382 RDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWA 441
M+++G++PN +T +S+ A +S LK G+
Sbjct: 404 ----------------------------MIESGIEPNRVTFMSILGACSSPSALKRGQQI 435
Query: 442 HEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHG 501
++++ +D + A++ MYAKCGS+ A VF I + +V WNA+I H
Sbjct: 436 QDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQ--NVVAWNAMITAYVQHE 493
Query: 502 DANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGE-RYFKSMKSVYNVEPDLKH 560
+ L + L K IK NS TF +L+ C + ++LG+ +F MK+ +E DL
Sbjct: 494 QYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKA--GLESDLHV 551
Query: 561 YGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSL--AG 618
+V + G L A+ + MP K D+V W T++A HG +V K + +G
Sbjct: 552 SNALVSMFVNCGDLMSAKNLFNDMP-KRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESG 610
Query: 619 LQP 621
++P
Sbjct: 611 IKP 613
>gi|297835272|ref|XP_002885518.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331358|gb|EFH61777.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 904
Score = 339 bits (870), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 203/636 (31%), Positives = 332/636 (52%), Gaps = 66/636 (10%)
Query: 29 ALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLD 88
L C+ G QIH LI K + F+QNSL++ YA+CG
Sbjct: 139 GLSVCAKSRDKGNGIQIHGLIIKMDYAKDLFVQNSLVHFYAECG---------------- 182
Query: 89 PVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF-RDMR 147
L+ AR+VFD+ + VS+TSMI G+A+ + ++A+++F R +R
Sbjct: 183 ---------------ELDCARKVFDEMSERNVVSWTSMICGYARREFAKDAVDLFFRMVR 227
Query: 148 ILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLV 207
VIPN VT+ VIS+ L + ++ + I+ ++ + L++MY C+++
Sbjct: 228 DEDVIPNSVTMVCVISACAKLEDLETGEKVYDFIRDSGIEVNDLMISALVDMYMKCNAID 287
Query: 208 EARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVER 267
A+ LFDE N+ N M + + + GL +
Sbjct: 288 IAKRLFDEYGASNLDLCNAMASNYVRQGLTK----------------------------- 318
Query: 268 LSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQAT 327
EAL + M+ GI P+ + ++ IS+C + G H +++ GF+ +D I
Sbjct: 319 --EALGVLNLMMDSGIRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNA 376
Query: 328 IIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSW 387
+I Y C R + A F+ + +WN+++AG+I NG ++ A + FN M ++++ SW
Sbjct: 377 LIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYIENGEVDAAWETFNTMPEKNIVSW 436
Query: 388 SAMISGYAQNEQPNMALELFHGMVDAG-VKPNEITMVSVFCAIASSGTLKEGRWAHEYVL 446
+ +IS Q A+E+FH M V + +TM+S+ A G L +W + Y+
Sbjct: 437 NTIISALVQENMYEEAIEVFHYMQSQECVNVDGVTMMSIASACGHLGALDLAKWIYYYIE 496
Query: 447 NNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLT 506
N I L+ L ++DM+++CG +A +F + +R VS W A I +AM G+
Sbjct: 497 KNRIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNR--DVSAWTAAIGAMAMAGNVERA 554
Query: 507 LKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVD 566
+++++++ ++ +K + + FIG L+ CCH GLV G+ F SM+ ++ V P+ HYGCMVD
Sbjct: 555 IELFNEMIEQGLKPDGVVFIGALTACCHGGLVQQGKEIFNSMEKLHGVSPEDVHYGCMVD 614
Query: 567 LLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPS 626
LLGRAG LE+A ++I+ MP + + VIW +LLAA R+ GNVE+ AA+ + L P S
Sbjct: 615 LLGRAGLLEEALQLIKDMPTEPNDVIWNSLLAACRVQGNVEMAAFAAEKIQVLAPERTGS 674
Query: 627 RVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
VLLSN+YA AGRW D +R M++ G+++ PG S
Sbjct: 675 YVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTS 710
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 133/542 (24%), Positives = 243/542 (44%), Gaps = 106/542 (19%)
Query: 103 DRLNDAREVFDK-TPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLA-- 159
+ L+ A+EVF+ C Y S+I G+A + +EA+ +F M G+ P++ T
Sbjct: 80 ESLSFAKEVFENGESYGTCFMYNSLIRGYASSGLCKEAILLFIRMMNSGISPDKYTFPFG 139
Query: 160 -SVISSSVHLG-GIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMK 217
SV + S G GI +HGL+IK+ + + +L++ Y C L AR +FDEM
Sbjct: 140 LSVCAKSRDKGNGI----QIHGLIIKMDYAKDLFVQNSLVHFYAECGELDCARKVFDEMS 195
Query: 218 ERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRA 277
ERN+VSW M+ G+A+ + A +LF +R
Sbjct: 196 ERNVVSWTSMICGYARREFAKDAVDLF------------------------------FRM 225
Query: 278 MLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGR 337
+ + + PN V +V +ISAC + G +++ I +G + D + + ++ Y C
Sbjct: 226 VRDEDVIPNSVTMVCVISACAKLEDLETGEKVYDFIRDSGIEVNDLMISALVDMYMKCNA 285
Query: 338 INLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQN 397
I++A+ F+ ++ NA+ + ++R G+ ++
Sbjct: 286 IDIAKRLFDEYGASNLDLCNAMASNYVRQGLTKE-------------------------- 319
Query: 398 EQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLS 457
AL + + M+D+G++P+ I+M+S + + + G+ H YVL N DN+
Sbjct: 320 -----ALGVLNLMMDSGIRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNIC 374
Query: 458 AAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRN 517
A+IDMY KC +TAF +F + ++T V WN+I+ G +G+ + + ++ + ++N
Sbjct: 375 NALIDMYMKCHRQDTAFRIFDRMSNKT--VVTWNSIVAGYIENGEVDAAWETFNTMPEKN 432
Query: 518 I--------------------------------KLNSITFIGVLSTCCHAGLVDLGERYF 545
I ++ +T + + S C H G +DL + +
Sbjct: 433 IVSWNTIISALVQENMYEEAIEVFHYMQSQECVNVDGVTMMSIASACGHLGALDLAKWIY 492
Query: 546 KSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGN 605
++ ++ D++ +VD+ R G E A + S+ + DV W + A + GN
Sbjct: 493 YYIEK-NRIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNR-DVSAWTAAIGAMAMAGN 550
Query: 606 VE 607
VE
Sbjct: 551 VE 552
Score = 152 bits (385), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 119/486 (24%), Positives = 214/486 (44%), Gaps = 69/486 (14%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+ +V + C+ + G++++ I SG+E N + ++L+++Y KC I AK +FD
Sbjct: 236 VTMVCVISACAKLEDLETGEKVYDFIRDSGIEVNDLMISALVDMYMKCNAIDIAKRLFDE 295
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
+ CN M S Y+R G +EAL V
Sbjct: 296 YGASNLDLCNAMASNYVRQ--------------------------GLT-----KEALGVL 324
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
M G+ P+ +++ S ISS L I + HG V++ + + I L++MY C
Sbjct: 325 NLMMDSGIRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKC 384
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYL 263
A +FD M + +V+WN ++ G+ + G V+ A E F +P K++VSW T+I +
Sbjct: 385 HRQDTAFRIFDRMSNKTVVTWNSIVAGYIENGEVDAAWETFNTMPEKNIVSWNTIISALV 444
Query: 264 QVERLSEALTMYRAMLC-DGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD 322
Q EA+ ++ M + + + V ++ + SACG A
Sbjct: 445 QENMYEEAIEVFHYMQSQECVNVDGVTMMSIASACGHLGALD------------------ 486
Query: 323 FIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKR 382
A I++Y RI +L LG L+ F R G E A +FN++ R
Sbjct: 487 --LAKWIYYYIEKNRI---QLDVRLG--------TTLVDMFSRCGDPESAMSIFNSLTNR 533
Query: 383 DVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAH 442
DV +W+A I A A+ELF+ M++ G+KP+ + + A G +++G+
Sbjct: 534 DVSAWTAAIGAMAMAGNVERAIELFNEMIEQGLKPDGVVFIGALTACCHGGLVQQGKEIF 593
Query: 443 EYVLN-NSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSP--WNAIICGLAM 499
+ + ++ D ++D+ + G + A ++ I+D T + WN+++ +
Sbjct: 594 NSMEKLHGVSPEDVHYGCMVDLLGRAGLLEEALQL---IKDMPTEPNDVIWNSLLAACRV 650
Query: 500 HGDANL 505
G+ +
Sbjct: 651 QGNVEM 656
>gi|359482718|ref|XP_002263673.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Vitis vinifera]
Length = 1088
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 190/651 (29%), Positives = 344/651 (52%), Gaps = 69/651 (10%)
Query: 17 LQNSDYE---LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGL 73
+Q S Y+ L S L + + +G+++H + ++ L S+ + ++L+++Y+KCG+
Sbjct: 368 MQESGYKSNRFNLGSILMASAGLADIGKGRELHGHLVRNLLNSDIILGSALVDMYSKCGM 427
Query: 74 ISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQN 133
+ +A +F S RN+ VSY +++ G+ Q
Sbjct: 428 VEEAHQVFRSLLE--------------RNE-----------------VSYNALLAGYVQE 456
Query: 134 DCWREALEVFRDMRIL-GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVII 192
EALE++ DM+ G+ P++ T ++++ + + R +H +I+ I +I+
Sbjct: 457 GKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIV 516
Query: 193 STNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDV 252
T L++MY C G + A+E+F R+ ++
Sbjct: 517 ETELVHMYSEC-------------------------------GRLNYAKEIFNRMAERNA 545
Query: 253 VSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSI 312
SW +MI+GY Q EAL +++ M +GI P+ + ++S+C +G ++H+
Sbjct: 546 YSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNF 605
Query: 313 IVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDA 372
IV+ + +Q ++ YA CG ++ A ++ IK + N +++ F+ +G DA
Sbjct: 606 IVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDVILNNVMVSAFVNSGRANDA 665
Query: 373 RQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASS 432
+ LF+ M++R+ W+++++GYA + F M+++ ++ + +TMV++ +S
Sbjct: 666 KNLFDQMEQRNTALWNSILAGYANKGLKKESFNHFLEMLESDIEYDVLTMVTIVNLCSSL 725
Query: 433 GTLKEGRWAHEYVLNNS-ITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWN 491
L+ G H ++ + + L A++DMY+KCG+I A VF ++ + ++ WN
Sbjct: 726 PALEHGDQLHSLIIKKGFVNCSVVLETALVDMYSKCGAITKARTVFDNMNGK--NIVSWN 783
Query: 492 AIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSV 551
A+I G + HG + L +Y ++ K+ + N +TF+ +LS C H GLV+ G R F SM+
Sbjct: 784 AMISGYSKHGCSKEALILYEEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRIFTSMQED 843
Query: 552 YNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGER 611
YN+E +HY CMVDLLGRAG+LEDA+E + MP++ +V WG LL A R+H ++++G
Sbjct: 844 YNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALLGACRVHKDMDMGRL 903
Query: 612 AAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
AA+ L L P + V++SNIYA AGRW++ IR+ M+ G+K+ PG S
Sbjct: 904 AAQRLFELDPQNPGPYVIMSNIYAAAGRWKEVEDIRQMMKMKGVKKDPGVS 954
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 142/585 (24%), Positives = 266/585 (45%), Gaps = 72/585 (12%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
SALR C A + G+Q+HS + G + +TF+ N+LI++YAKC
Sbjct: 277 FTFASALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCD----------- 325
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
D +C +VFD+ + V++ S+I AQ + +AL +F
Sbjct: 326 ----DEESC----------------LKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLF 365
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
M+ G N L S++ +S L I + R LHG +++ +++ +I+ + L++MY C
Sbjct: 366 LRMQESGYKSNRFNLGSILMASAGLADIGKGRELHGHLVRNLLNSDIILGSALVDMYSKC 425
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYL 263
+ EA +F + ERN VS+N +L G+ + G E A EL+ + S+
Sbjct: 426 GMVEEAHQVFRSLLERNEVSYNALLAGYVQEGKAEEALELYHDMQSE------------- 472
Query: 264 QVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDF 323
DGI P+ L++ C +G QIH+ +++A
Sbjct: 473 -----------------DGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNII 515
Query: 324 IQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ--- 380
++ ++H Y+ CGR+N A+ F + + SWN++I G+ +NG ++A +LF MQ
Sbjct: 516 VETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNG 575
Query: 381 -KRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGR 439
K D +S S+M+S EL + +V ++ I V + A G++
Sbjct: 576 IKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAW 635
Query: 440 WAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAM 499
++ + + LN+ + +A ++ G N A +F + R T++ WN+I+ G A
Sbjct: 636 KVYDQTIKKDVILNNVMVSAFVN----SGRANDAKNLFDQMEQRNTAL--WNSILAGYAN 689
Query: 500 HGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLK 559
G + + ++ + +I+ + +T + +++ C ++ G++ + V +
Sbjct: 690 KGLKKESFNHFLEMLESDIEYDVLTMVTIVNLCSSLPALEHGDQLHSLIIKKGFVNCSVV 749
Query: 560 HYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHG 604
+VD+ + G + A V +M K ++V W +++ HG
Sbjct: 750 LETALVDMYSKCGAITKARTVFDNMNGK-NIVSWNAMISGYSKHG 793
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 131/534 (24%), Positives = 242/534 (45%), Gaps = 83/534 (15%)
Query: 16 NLQNSDYEL--ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGL 73
NL NSD L ALV C V + Q+ F+S LE N N+L+ Y + G
Sbjct: 406 NLLNSDIILGSALVDMYSKCGM---VEEAHQV----FRSLLERNEVSYNALLAGYVQEGK 458
Query: 74 ISQAKSMFDSCSTLDPVACN-------IMISGYIRND----------------------- 103
+A ++ + D + + + + RND
Sbjct: 459 AEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVET 518
Query: 104 ----------RLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIP 153
RLN A+E+F++ + S+ SMI G+ QN +EAL +F+ M++ G+ P
Sbjct: 519 ELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKP 578
Query: 154 NEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLF 213
+ +L+S++SS V L + R LH +++ ++ I+ L++MY C S+ A ++
Sbjct: 579 DCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVY 638
Query: 214 DEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALT 273
D+ +++++ NVM++ F +G A+ LF+++ ++ W +++ GY E+
Sbjct: 639 DQTIKKDVILNNVMVSAFVNSGRANDAKNLFDQMEQRNTALWNSILAGYANKGLKKESFN 698
Query: 274 MYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGF-DCYDFIQATIIHFY 332
+ ML I + + +V +++ C A G Q+HS+I+K GF +C ++ ++ Y
Sbjct: 699 HFLEMLESDIEYDVLTMVTIVNLCSSLPALEHGDQLHSLIIKKGFVNCSVVLETALVDMY 758
Query: 333 AACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMIS 392
+ CG I AR F+ +I SWNA+I+G+ ++G ++A L+ M K+ +Y
Sbjct: 759 SKCGAITKARTVFDNMNGKNIVSWNAMISGYSKHGCSKEALILYEEMPKKGMY------- 811
Query: 393 GYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG-RWAHEYVLNNSIT 451
PNE+T +++ A + +G ++EG R + +I
Sbjct: 812 ------------------------PNEVTFLAILSACSHTGLVEEGLRIFTSMQEDYNIE 847
Query: 452 LNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANL 505
++D+ + G + A E F VS W A++ +H D ++
Sbjct: 848 AKAEHYTCMVDLLGRAGRLEDAKE-FVEKMPIEPEVSTWGALLGACRVHKDMDM 900
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 141/639 (22%), Positives = 273/639 (42%), Gaps = 101/639 (15%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
L S ++ C + +G+ IH+ + +G + ++ ++ LYA+ G +
Sbjct: 72 LPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCL--------- 122
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
D L AR++F++ P + ++ +MI+ +A+ D + E L ++
Sbjct: 123 -------------------DDLCYARKLFEEMPERNLTAWNTMILAYARVDDYMEVLRLY 163
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
MR G ++ T SVI + + + + R L V+K ++ C
Sbjct: 164 GRMRGSGNFSDKFTFPSVIKACIAMEDMGGVRQLQSSVVKAGLN---------------C 208
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYL 263
N+ +++G+A+ G ++ A + I VV+W +I GY+
Sbjct: 209 ----------------NLFVGGALVDGYARFGWMDDAVTSLDEIEGTSVVTWNAVIAGYV 252
Query: 264 QVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDF 323
++ EA ++ ML G+ P++ + CG + G Q+HS ++ GF F
Sbjct: 253 KILSWEEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIACGFKGDTF 312
Query: 324 IQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRD 383
+ +I YA C E ++F+ M +R+
Sbjct: 313 VGNALIDMYAKCDD-------------------------------EESCLKVFDEMGERN 341
Query: 384 VYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHE 443
+W+++IS AQ N AL LF M ++G K N + S+ A A + +GR H
Sbjct: 342 QVTWNSIISAEAQFGHFNDALVLFLRMQESGYKSNRFNLGSILMASAGLADIGKGRELHG 401
Query: 444 YVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDA 503
+++ N + + L +A++DMY+KCG + A +VF + +R VS +NA++ G G A
Sbjct: 402 HLVRNLLNSDIILGSALVDMYSKCGMVEEAHQVFRSLLER-NEVS-YNALLAGYVQEGKA 459
Query: 504 NLTLKIYSDLEKRN-IKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYG 562
L++Y D++ + I+ + TF +L+ C + + G + + N+ ++
Sbjct: 460 EEALELYHDMQSEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRA-NITKNIIVET 518
Query: 563 CMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAK--SLAGLQ 620
+V + G+L A+E+ M + + W +++ + +G + R K L G++
Sbjct: 519 ELVHMYSECGRLNYAKEIFNRMAER-NAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIK 577
Query: 621 PSHGPSRVLLSNIY----ADAGRWEDAFSIRKEMRDCGM 655
P +LS+ + GR F +R M + G+
Sbjct: 578 PDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGI 616
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 65/323 (20%), Positives = 125/323 (38%), Gaps = 38/323 (11%)
Query: 286 NDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRIN---LAR 342
N + LI C + +F G IH+ ++ G++ ++ I+ YA G ++ AR
Sbjct: 70 NPLPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYAR 129
Query: 343 LQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNM 402
FE + ++ +WN +I + R ++D ++
Sbjct: 130 KLFEEMPERNLTAWNTMILAYAR---VDDYMEV--------------------------- 159
Query: 403 ALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIID 462
L L+ M +G ++ T SV A + + R V+ + N + A++D
Sbjct: 160 -LRLYGRMRGSGNFSDKFTFPSVIKACIAMEDMGGVRQLQSSVVKAGLNCNLFVGGALVD 218
Query: 463 MYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNS 522
YA+ G ++ A I TSV WNA+I G I+ + K + ++
Sbjct: 219 GYARFGWMDDAVTSLDEIEG--TSVVTWNAVIAGYVKILSWEEAWGIFDRMLKIGVCPDN 276
Query: 523 ITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIR 582
TF L C D G++ + + + D ++D+ + E +V
Sbjct: 277 FTFASALRVCGALRSRDGGKQVHSKLIAC-GFKGDTFVGNALIDMYAKCDDEESCLKVFD 335
Query: 583 SMPMKADVVIWGTLLAASRIHGN 605
M + + V W ++++A G+
Sbjct: 336 EMGER-NQVTWNSIISAEAQFGH 357
>gi|226528958|ref|NP_001141436.1| uncharacterized protein LOC100273546 [Zea mays]
gi|194704572|gb|ACF86370.1| unknown [Zea mays]
gi|414877969|tpg|DAA55100.1| TPA: hypothetical protein ZEAMMB73_905907 [Zea mays]
Length = 700
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 205/637 (32%), Positives = 340/637 (53%), Gaps = 47/637 (7%)
Query: 57 NTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTP 116
NT N++I + G ++ A+S+FD D + +M+S Y R L AR+V D+ P
Sbjct: 79 NTVSWNAMIAALSDHGRVADARSLFDRMPVRDEFSWTVMVSCYARGGDLELARDVLDRMP 138
Query: 117 -IKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECR 175
KC Y +MI G+A+N + +A+++ R+M P+ V+ S ++ G +
Sbjct: 139 GDKCTACYNAMISGYAKNGRFDDAMKLLREM----PAPDLVSWNSALAGLTQSGEMVRAV 194
Query: 176 MLHGLVIK------LMIDGFV-------------------IIS-TNLLNMYCVCSSLVEA 209
++K LM+ GFV +IS LLN YC + +A
Sbjct: 195 QFFDEMVKDMTSWNLMLAGFVRTGDLNAASSFFAKIESPNVISWVTLLNGYCRAGRIADA 254
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLS 269
R LFD M ERN+V+WNVML+G+ +E A +LF+ +P K+ +SW T+I G + +L
Sbjct: 255 RDLFDRMPERNVVAWNVMLDGYVHLSPIEEACKLFDEMPIKNSISWTTIISGLARAGKLQ 314
Query: 270 EALTMYRAMLCDGIAPNDVMIVDLI--SACGRAMAFGEGLQIHSIIVKAGFDCYDFIQAT 327
EA + M + +A ++ + + A +G+++H + C++ T
Sbjct: 315 EAKDLLDKMSFNCVAAKTALMHGYLQRNMADDARRIFDGMEVHDTV------CWN----T 364
Query: 328 IIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSW 387
+I Y CG + A L F+ + SWN +IAG+ ++G + A +F M +R+ SW
Sbjct: 365 MISGYVQCGILEEAMLLFQRMPNKDMVSWNTMIAGYAQDGQMHKAIGIFRRMNRRNTVSW 424
Query: 388 SAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLN 447
+++ISG+ QN++ AL F M + + T S A A+ L GR H +L
Sbjct: 425 NSVISGFVQNDRFVDALHHFMLMRRGTNRADWSTYASCLRACANLAVLHVGRQLHN-LLV 483
Query: 448 NSITLNDNLSA-AIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLT 506
S +ND+ + A+I YAKCG I A ++F + + + WNA+I G A +G
Sbjct: 484 RSGHINDSFAGNALISTYAKCGRILEAKQIFDEMVYK--DIVSWNALIDGYASNGQGTEA 541
Query: 507 LKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVD 566
+ ++ ++E ++ + +TF+G+LS C HAGL+D G +F SM Y ++P +HY CMVD
Sbjct: 542 IAVFREMEANGVRPDEVTFVGILSACSHAGLIDEGLFFFYSMTKEYLLKPVAEHYACMVD 601
Query: 567 LLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPS 626
LLGRAG+L +A E+++ M ++ + +WG LL A +H N E+ + AA+ L+ L+P +
Sbjct: 602 LLGRAGKLNEAFELVQGMQIQPNAGVWGALLGACHMHKNHELAQLAAERLSELEPRKASN 661
Query: 627 RVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSG 663
VLLSNI A+AG+W+++ R +++ G+ + PG +G
Sbjct: 662 YVLLSNISAEAGKWDESEKARASIKEKGVNKPPGLAG 698
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 142/567 (25%), Positives = 255/567 (44%), Gaps = 88/567 (15%)
Query: 23 ELALVSALRYCSAHIAVSQ-GQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMF 81
E+ + + SA ++Q G+ + ++ F + + N ++ + + G ++ A S F
Sbjct: 168 EMPAPDLVSWNSALAGLTQSGEMVRAVQFFDEMVKDMTSWNLMLAGFVRTGDLNAASSFF 227
Query: 82 DSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALE 141
+ + ++ +++GY R R+ DAR++FD+ P + V++ M+ G+ EA +
Sbjct: 228 AKIESPNVISWVTLLNGYCRAGRIADARDLFDRMPERNVVAWNVMLDGYVHLSPIEEACK 287
Query: 142 VFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYC 201
+F +M I N ++ ++IS G + E + L + M V T L++ Y
Sbjct: 288 LFDEM----PIKNSISWTTIISGLARAGKLQEAKDL----LDKMSFNCVAAKTALMHGYL 339
Query: 202 VCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDG 261
+ +AR +FD M+ + V WN M++G+ + G++E A LF+R+P+KD+VSW TMI G
Sbjct: 340 QRNMADDARRIFDGMEVHDTVCWNTMISGYVQCGILEEAMLLFQRMPNKDMVSWNTMIAG 399
Query: 262 YLQVERLSEALTMYRAM----------LCDGIAPNDVMIVDL------------------ 293
Y Q ++ +A+ ++R M + G ND + L
Sbjct: 400 YAQDGQMHKAIGIFRRMNRRNTVSWNSVISGFVQNDRFVDALHHFMLMRRGTNRADWSTY 459
Query: 294 ---ISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIK 350
+ AC G Q+H+++V++G F +I YA CGRI A+ F+ +
Sbjct: 460 ASCLRACANLAVLHVGRQLHNLLVRSGHINDSFAGNALISTYAKCGRILEAKQIFDEMVY 519
Query: 351 DHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGM 410
I SWNALI G+ NG Q A+ +F M
Sbjct: 520 KDIVSWNALIDGYASNG-------------------------------QGTEAIAVFREM 548
Query: 411 VDAGVKPNEITMVSVFCAIASSGTLKEGRW-----AHEYVLNNSITLNDNLSAAIIDMYA 465
GV+P+E+T V + A + +G + EG + EY+L A ++D+
Sbjct: 549 EANGVRPDEVTFVGILSACSHAGLIDEGLFFFYSMTKEYLLKPVA----EHYACMVDLLG 604
Query: 466 KCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGD---ANLTLKIYSDLEKRNIKLNS 522
+ G +N AFE+ ++ + + W A++ MH + A L + S+LE R +
Sbjct: 605 RAGKLNEAFELVQGMQIQPNA-GVWGALLGACHMHKNHELAQLAAERLSELEPR----KA 659
Query: 523 ITFIGVLSTCCHAGLVDLGERYFKSMK 549
++ + + AG D E+ S+K
Sbjct: 660 SNYVLLSNISAEAGKWDESEKARASIK 686
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 104/397 (26%), Positives = 179/397 (45%), Gaps = 34/397 (8%)
Query: 206 LVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQV 265
L AR LFD M RN V++N ML+ A+ G ++ AR LF+ +P ++ VSW MI
Sbjct: 34 LAAARRLFDAMPLRNTVTYNAMLSALARHGRIDEARALFDGMPGRNTVSWNAMIAALSDH 93
Query: 266 ERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVK--AGFDCYDF 323
R+++A +++ D + D ++ +C A G L++ ++ G C
Sbjct: 94 GRVADARSLF-----DRMPVRDEFSWTVMVSC---YARGGDLELARDVLDRMPGDKCTAC 145
Query: 324 IQATIIHFYAACGRINLA-RLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKR 382
A +I YA GR + A +L E+ D + SWN+ +AG ++G + A Q F+ M K
Sbjct: 146 YNA-MISGYAKNGRFDDAMKLLREMPAPD-LVSWNSALAGLTQSGEMVRAVQFFDEMVK- 202
Query: 383 DVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAH 442
D+ SW+ M++G+ + N A F + PN I+ V++ +G + + R
Sbjct: 203 DMTSWNLMLAGFVRTGDLNAASSFFAKI----ESPNVISWVTLLNGYCRAGRIADARDLF 258
Query: 443 EYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGD 502
+ + ++ + ++D Y I A ++F + + S+S W II GLA G
Sbjct: 259 DRMPERNVVAWN----VMLDGYVHLSPIEEACKLFDEMPIK-NSIS-WTTIISGLARAGK 312
Query: 503 ANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYG 562
+ + + + G L + D R F M+ D +
Sbjct: 313 LQEAKDLLDKMSFNCVAAKTALMHGYL----QRNMADDARRIFDGMEV-----HDTVCWN 363
Query: 563 CMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAA 599
M+ + G LE+A + + MP K D+V W T++A
Sbjct: 364 TMISGYVQCGILEEAMLLFQRMPNK-DMVSWNTMIAG 399
>gi|356510389|ref|XP_003523921.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 818
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 203/635 (31%), Positives = 319/635 (50%), Gaps = 96/635 (15%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
L+ C ++ + +G++IH LI +G ESN F+ ++++LYAKC
Sbjct: 152 LQLCGENLDLKKGREIHGLIITNGFESNLFVMTAVMSLYAKC------------------ 193
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
++++A ++F++ K VS+T+++ G+AQN + AL++ M+
Sbjct: 194 -------------RQIDNAYKMFERMQHKDLVSWTTLVAGYAQNGHAKRALQLVLQMQEA 240
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
G P+ VTL S++ + + + R +HG + + V ++ LL+MY C S
Sbjct: 241 GQKPDSVTLVSILPAVADMKALRIGRSIHGYAFRSGFESLVNVTNALLDMYFKCGS---- 296
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLS 269
+AR +F+ + SK VVSW TMIDG Q
Sbjct: 297 ---------------------------ARIARLVFKGMRSKTVVSWNTMIDGCAQNGESE 329
Query: 270 EALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATII 329
EA + ML +G P V ++ ++ AC G +H ++ K D + ++I
Sbjct: 330 EAFATFLKMLDEGEVPTRVTMMGVLLACANLGDLERGWFVHKLLDKLKLDSNVSVMNSLI 389
Query: 330 HFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSA 389
Y+ C R+++A +FNN++K +V +W+A
Sbjct: 390 SMYSKCKRVDIAA-------------------------------SIFNNLEKTNV-TWNA 417
Query: 390 MISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNS 449
MI GYAQN AL LF M G+K + T+V V A+A ++ +W H +
Sbjct: 418 MILGYAQNGCVKEALNLFCMMQSQGIKLDCFTLVGVITALADFSVNRQAKWIHGLAVRAC 477
Query: 450 ITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKI 509
+ N +S A++DMYAKCG+I TA ++F +++R V WNA+I G HG TL +
Sbjct: 478 MDNNVFVSTALVDMYAKCGAIKTARKLFDMMQER--HVITWNAMIDGYGTHGVGKETLDL 535
Query: 510 YSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLG 569
+++++K +K N ITF+ V+S C H+G V+ G FKSM+ Y +EP + HY MVDLLG
Sbjct: 536 FNEMQKGAVKPNDITFLSVISACSHSGFVEEGLLLFKSMQEDYYLEPTMDHYSAMVDLLG 595
Query: 570 RAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVL 629
RAGQL+DA I+ MP+K + + G +L A +IH NVE+GE+AA+ L L P G VL
Sbjct: 596 RAGQLDDAWNFIQEMPIKPGISVLGAMLGACKIHKNVELGEKAAQKLFKLDPDEGGYHVL 655
Query: 630 LSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
L+NIYA W+ +R M D G+ + PG S V
Sbjct: 656 LANIYASNSMWDKVAKVRTAMEDKGLHKTPGCSWV 690
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 136/512 (26%), Positives = 219/512 (42%), Gaps = 106/512 (20%)
Query: 9 VFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLY 68
V Q+A Q D + LVS L + A+ G+ IH F+SG ES + N+L+++Y
Sbjct: 234 VLQMQEAG-QKPD-SVTLVSILPAVADMKALRIGRSIHGYAFRSGFESLVNVTNALLDMY 291
Query: 69 AKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIM 128
KCG S I AR VF K VS+ +MI
Sbjct: 292 FKCG------------------------SARI-------ARLVFKGMRSKTVVSWNTMID 320
Query: 129 GFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDG 188
G AQN EA F M G +P VT+ V+ + +LG + +H L+ KL +D
Sbjct: 321 GCAQNGESEEAFATFLKMLDEGEVPTRVTMMGVLLACANLGDLERGWFVHKLLDKLKLDS 380
Query: 189 FVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIP 248
V + +L++MY C + A S+F+ +++ N V+WN M+ G+A+ G V+
Sbjct: 381 NVSVMNSLISMYSKCKRVDIAASIFNNLEKTN-VTWNAMILGYAQNGCVK---------- 429
Query: 249 SKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQ 308
EAL ++ M GI + +V +I+A +
Sbjct: 430 ---------------------EALNLFCMMQSQGIKLDCFTLVGVITALADFSVNRQAKW 468
Query: 309 IHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGM 368
IH + V+A D F+ ++ YA CG I AR F++ + H+ +WNA+I G+ +G+
Sbjct: 469 IHGLAVRACMDNNVFVSTALVDMYAKCGAIKTARKLFDMMQERHVITWNAMIDGYGTHGV 528
Query: 369 IEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCA 428
++ LFN MQK VKPN+IT +SV A
Sbjct: 529 GKETLDLFNEMQK-------------------------------GAVKPNDITFLSVISA 557
Query: 429 IASSGTLKEG-----RWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDR 483
+ SG ++EG +Y L ++ D+ S A++D+ + G ++ A+ + +
Sbjct: 558 CSHSGFVEEGLLLFKSMQEDYYLEPTM---DHYS-AMVDLLGRAGQLDDAWNFIQEMPIK 613
Query: 484 TTSVSPWNAIICGLAMHGDANLTLKIYSDLEK 515
+S A++ +H + L K L K
Sbjct: 614 -PGISVLGAMLGACKIHKNVELGEKAAQKLFK 644
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 143/314 (45%), Gaps = 39/314 (12%)
Query: 231 FAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMI 290
F K G A +FE + K V + M+ GY + L +AL + M+CD + +++
Sbjct: 89 FCKFGSNSEAARVFEHVELKLDVLYHIMLKGYAKNSSLGDALCFFLRMMCDEVR---LVV 145
Query: 291 VD---LISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFEL 347
D L+ CG + +G +IH +I+ GF+ F+ ++ YA C +I+ A FE
Sbjct: 146 GDYACLLQLCGENLDLKKGREIHGLIITNGFESNLFVMTAVMSLYAKCRQIDNAYKMFER 205
Query: 348 GIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELF 407
+ SW L+AG+ +NG + A QL MQ
Sbjct: 206 MQHKDLVSWTTLVAGYAQNGHAKRALQLVLQMQ--------------------------- 238
Query: 408 HGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKC 467
+AG KP+ +T+VS+ A+A L+ GR H Y + N++ A++DMY KC
Sbjct: 239 ----EAGQKPDSVTLVSILPAVADMKALRIGRSIHGYAFRSGFESLVNVTNALLDMYFKC 294
Query: 468 GSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIG 527
GS A VF +R +T V WN +I G A +G++ + + +T +G
Sbjct: 295 GSARIARLVFKGMRSKT--VVSWNTMIDGCAQNGESEEAFATFLKMLDEGEVPTRVTMMG 352
Query: 528 VLSTCCHAGLVDLG 541
VL C + G ++ G
Sbjct: 353 VLLACANLGDLERG 366
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 135/301 (44%), Gaps = 25/301 (8%)
Query: 359 LIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPN 418
+I+ F + G +A ++F +++ + + M+ GYA+N AL F M+ V+
Sbjct: 85 VISLFCKFGSNSEAARVFEHVELKLDVLYHIMLKGYAKNSSLGDALCFFLRMMCDEVR-- 142
Query: 419 EITMVSVFCAIASSGT---LKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFE 475
+ + C + G LK+GR H ++ N N + A++ +YAKC I+ A++
Sbjct: 143 -LVVGDYACLLQLCGENLDLKKGREIHGLIITNGFESNLFVMTAVMSLYAKCRQIDNAYK 201
Query: 476 VFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHA 535
+F ++ + + W ++ G A +G A L++ +++ K +S+T + +L
Sbjct: 202 MFERMQHK--DLVSWTTLVAGYAQNGHAKRALQLVLQMQEAGQKPDSVTLVSILPAVADM 259
Query: 536 GLVDLGERY----FKS-MKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADV 590
+ +G F+S +S+ NV ++D+ + G A V + M K V
Sbjct: 260 KALRIGRSIHGYAFRSGFESLVNVT------NALLDMYFKCGSARIARLVFKGMRSKT-V 312
Query: 591 VIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIY---ADAGRWEDAFSIR 647
V W T++ +G E E A L L P+RV + + A+ G E + +
Sbjct: 313 VSWNTMIDGCAQNGESE--EAFATFLKMLDEGEVPTRVTMMGVLLACANLGDLERGWFVH 370
Query: 648 K 648
K
Sbjct: 371 K 371
>gi|222628408|gb|EEE60540.1| hypothetical protein OsJ_13880 [Oryza sativa Japonica Group]
Length = 594
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 169/420 (40%), Positives = 260/420 (61%), Gaps = 6/420 (1%)
Query: 225 NVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIA 284
++ +A G VE AR +F+ +P +D+V+WG M+D Y Q EAL ++ +M +
Sbjct: 108 TALVRAYAACGRVEDARRVFDGMPDRDLVAWGVMLDCYCQARNYEEALLLFHSMKRSRVV 167
Query: 285 PNDVMIVDLISACG--RAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLAR 342
P+ V+I ++S C R + FG+ + + ++ D + +++ YA+C + +A
Sbjct: 168 PDQVIIATVLSTCAHTRNLRFGKAIHSYMLVSDTLIDAQ--VSCALMNMYASCADMEMAE 225
Query: 343 LQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNM 402
+ + I ++ G+ +NG +E A +FN M +DV SWSAMI+GYA++ +P
Sbjct: 226 KLYNRVSEKEIVLSTTMVYGYAKNGKVEIAHSIFNGMPAKDVVSWSAMIAGYAESSKPME 285
Query: 403 ALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIID 462
AL LFH M +GVKP+EITM+SV A A+ G L++ R H +V N+S+ + A+ID
Sbjct: 286 ALNLFHDMQRSGVKPDEITMLSVISACANVGALEKARCIHSFVENHSMCKILPIGNALID 345
Query: 463 MYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNS 522
M++KCGS+ A +VF + + +V W +II AMHGD L ++ +++ I+ N
Sbjct: 346 MFSKCGSLTLALDVFNAMPQK--NVVTWTSIITASAMHGDGRSALTLFENMKSEGIQPNG 403
Query: 523 ITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIR 582
+TF+G+L CCHAGLV+ G FK M Y +EP +HYGCMVDLLGRA L A ++I+
Sbjct: 404 VTFLGLLYACCHAGLVEEGRLLFKIMVQQYRIEPMHEHYGCMVDLLGRAKLLGQAADLIQ 463
Query: 583 SMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWED 642
SM ++ +VVIWG+LLAA R+HG++E+G AAK + L P+HG ++VLLSNIYA+ G W D
Sbjct: 464 SMHLRPNVVIWGSLLAACRMHGDLELGTFAAKKILELDPNHGGAQVLLSNIYAEYGNWND 523
Score = 186 bits (471), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 130/484 (26%), Positives = 222/484 (45%), Gaps = 68/484 (14%)
Query: 25 ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSC 84
AL S LR + ++ H L F+ G E + F+ +L+ YA CG
Sbjct: 71 ALPSLLRAIAFARSLGTAGAAHGLAFRVGAEVDGFVGTALVRAYAACG------------ 118
Query: 85 STLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFR 144
R+ DAR VFD P + V++ M+ + Q + EAL +F
Sbjct: 119 -------------------RVEDARRVFDGMPDRDLVAWGVMLDCYCQARNYEEALLLFH 159
Query: 145 DMRILGVIPNEVTLASVISSSVHLGGIWECRMLHG--LVIKLMIDGFVIISTNLLNMYCV 202
M+ V+P++V +A+V+S+ H + + +H LV +ID V S L+NMY
Sbjct: 160 SMKRSRVVPDQVIIATVLSTCAHTRNLRFGKAIHSYMLVSDTLIDAQV--SCALMNMYAS 217
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
C+ + A L++ + E+ IV M+ G+AK G VE+A +F +P+KDVVSW MI GY
Sbjct: 218 CADMEMAEKLYNRVSEKEIVLSTTMVYGYAKNGKVEIAHSIFNGMPAKDVVSWSAMIAGY 277
Query: 263 LQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD 322
+ + EAL ++ M G+ P+++ ++ +ISAC A + IHS +
Sbjct: 278 AESSKPMEALNLFHDMQRSGVKPDEITMLSVISACANVGALEKARCIHSFVEN------- 330
Query: 323 FIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKR 382
++ C + + NALI F + G + A +FN M ++
Sbjct: 331 ---------HSMCKILPIG---------------NALIDMFSKCGSLTLALDVFNAMPQK 366
Query: 383 DVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAH 442
+V +W+++I+ A + AL LF M G++PN +T + + A +G ++EGR
Sbjct: 367 NVVTWTSIITASAMHGDGRSALTLFENMKSEGIQPNGVTFLGLLYACCHAGLVEEGRLLF 426
Query: 443 EYVLNN-SITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHG 501
+ ++ I ++D+ + + A ++ + R V W +++ MHG
Sbjct: 427 KIMVQQYRIEPMHEHYGCMVDLLGRAKLLGQAADLIQSMHLRPNVVI-WGSLLAACRMHG 485
Query: 502 DANL 505
D L
Sbjct: 486 DLEL 489
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 97/371 (26%), Positives = 175/371 (47%), Gaps = 48/371 (12%)
Query: 9 VFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLY 68
+F+S K + D ++ + + L C+ + G+ IHS + S + + +L+N+Y
Sbjct: 157 LFHSMKRSRVVPD-QVIIATVLSTCAHTRNLRFGKAIHSYMLVSDTLIDAQVSCALMNMY 215
Query: 69 AKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIM 128
A C + A+ +++ S + V M+ GY +N ++ A +F+ P K VS+++MI
Sbjct: 216 ASCADMEMAEKLYNRVSEKEIVLSTTMVYGYAKNGKVEIAHSIFNGMPAKDVVSWSAMIA 275
Query: 129 GFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDG 188
G+A++ EAL +F DM+ GV P+E+T+ SVIS+ ++G + + R +H V +
Sbjct: 276 GYAESSKPMEALNLFHDMQRSGVKPDEITMLSVISACANVGALEKARCIHSFVENHSMCK 335
Query: 189 FVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIP 248
+ I L++M+ C SL A +F+ M ++N+V+W ++ A G
Sbjct: 336 ILPIGNALIDMFSKCGSLTLALDVFNAMPQKNVVTWTSIITASAMHG------------- 382
Query: 249 SKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQ 308
DG ALT++ M +GI PN V + L+ AC A EG
Sbjct: 383 -----------DG-------RSALTLFENMKSEGIQPNGVTFLGLLYACCHAGLVEEGRL 424
Query: 309 IHSIIVKAGFDCYDFIQATIIHFYAAC-----GRINL----ARLQFELGIKDHIASWNAL 359
+ I+V+ + +H + C GR L A L + ++ ++ W +L
Sbjct: 425 LFKIMVQQ-------YRIEPMHEHYGCMVDLLGRAKLLGQAADLIQSMHLRPNVVIWGSL 477
Query: 360 IAGFIRNGMIE 370
+A +G +E
Sbjct: 478 LAACRMHGDLE 488
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/351 (23%), Positives = 151/351 (43%), Gaps = 62/351 (17%)
Query: 284 APNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARL 343
AP + L+ A A + G H + + G + F+ ++ YAACGR+
Sbjct: 66 APGRRALPSLLRAIAFARSLGTAGAAHGLAFRVGAEVDGFVGTALVRAYAACGRV----- 120
Query: 344 QFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMA 403
EDAR++F+ M RD+ +W M+ Y Q A
Sbjct: 121 --------------------------EDARRVFDGMPDRDLVAWGVMLDCYCQARNYEEA 154
Query: 404 LELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDM 463
L LFH M + V P+++ + +V A + L+ G+ H Y+L + ++ +S A+++M
Sbjct: 155 LLLFHSMKRSRVVPDQVIIATVLSTCAHTRNLRFGKAIHSYMLVSDTLIDAQVSCALMNM 214
Query: 464 YAKCGSINTAFEVFYHIRDR-----------------------------TTSVSPWNAII 494
YA C + A +++ + ++ V W+A+I
Sbjct: 215 YASCADMEMAEKLYNRVSEKEIVLSTTMVYGYAKNGKVEIAHSIFNGMPAKDVVSWSAMI 274
Query: 495 CGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNV 554
G A L ++ D+++ +K + IT + V+S C + G ++ R S +++
Sbjct: 275 AGYAESSKPMEALNLFHDMQRSGVKPDEITMLSVISACANVGALEKA-RCIHSFVENHSM 333
Query: 555 EPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGN 605
L ++D+ + G L A +V +MP K +VV W +++ AS +HG+
Sbjct: 334 CKILPIGNALIDMFSKCGSLTLALDVFNAMPQK-NVVTWTSIITASAMHGD 383
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 114/258 (44%), Gaps = 47/258 (18%)
Query: 2 PLDHFHSVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQ 61
P++ + + Q++ ++ E+ ++S + C+ A+ + + IHS + + I
Sbjct: 283 PMEALNLFHDMQRSGVKPD--EITMLSVISACANVGALEKARCIHSFVENHSMCKILPIG 340
Query: 62 NSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCV 121
N+LI++++KCG L A +VF+ P K V
Sbjct: 341 NALIDMFSKCG-------------------------------SLTLALDVFNAMPQKNVV 369
Query: 122 SYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLV 181
++TS+I A + R AL +F +M+ G+ PN VT ++ + H G + E R+L
Sbjct: 370 TWTSIITASAMHGDGRSALTLFENMKSEGIQPNGVTFLGLLYACCHAGLVEEGRLL---- 425
Query: 182 IKLMIDGFVIISTN-----LLNMYCVCSSLVEARSLFDEMKER-NIVSWNVMLNGFAKAG 235
K+M+ + I + ++++ L +A L M R N+V W +L G
Sbjct: 426 FKIMVQQYRIEPMHEHYGCMVDLLGRAKLLGQAADLIQSMHLRPNVVIWGSLLAACRMHG 485
Query: 236 LVEL----ARELFERIPS 249
+EL A+++ E P+
Sbjct: 486 DLELGTFAAKKILELDPN 503
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 48/240 (20%), Positives = 101/240 (42%), Gaps = 7/240 (2%)
Query: 417 PNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEV 476
P + S+ AIA + +L AH ++ + A++ YA CG + A V
Sbjct: 67 PGRRALPSLLRAIAFARSLGTAGAAHGLAFRVGAEVDGFVGTALVRAYAACGRVEDARRV 126
Query: 477 FYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAG 536
F + DR + W ++ + L ++ +++ + + + VLSTC H
Sbjct: 127 FDGMPDR--DLVAWGVMLDCYCQARNYEEALLLFHSMKRSRVVPDQVIIATVLSTCAHTR 184
Query: 537 LVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTL 596
+ G + S V + D + ++++ +E AE++ + K ++V+ T+
Sbjct: 185 NLRFG-KAIHSYMLVSDTLIDAQVSCALMNMYASCADMEMAEKLYNRVSEK-EIVLSTTM 242
Query: 597 LAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMK 656
+ +G VE+ A G+ S + YA++ + +A ++ +M+ G+K
Sbjct: 243 VYGYAKNGKVEI---AHSIFNGMPAKDVVSWSAMIAGYAESSKPMEALNLFHDMQRSGVK 299
>gi|326488767|dbj|BAJ97995.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 919
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 207/641 (32%), Positives = 322/641 (50%), Gaps = 95/641 (14%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+ + S L C++ +++G+Q+HS + K+G+ + I+ SL++LY KCG+I +A +F S
Sbjct: 245 VTIASLLAACASIGDLNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIFKS 304
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
+ V N+M+ Y +++D + FD +F
Sbjct: 305 GDRTNVVLWNLMLVAY---GQISDLAKSFD----------------------------LF 333
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
M GV PNE T ++ + + G I +H L IK + + +S L++MY
Sbjct: 334 CQMVAAGVRPNEFTYPCLLRTCTYAGEINLGEQIHLLSIKTGFESDMYVSGVLIDMY--- 390
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYL 263
+K G ++ AR + E + +KDVVSW +MI GY+
Sbjct: 391 ----------------------------SKYGWLDKARRILEVLEAKDVVSWTSMIAGYV 422
Query: 264 QVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDF 323
Q E EAL ++ M GI P+++ + ISAC A +G QIHS + +G+
Sbjct: 423 QHEFCKEALETFKDMQLFGIWPDNIGLASAISACAGIKAMRQGQQIHSRVYVSGYSA--- 479
Query: 324 IQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRD 383
++ WNAL+ + R G ++A LF ++ +D
Sbjct: 480 ----------------------------DVSIWNALVNLYARCGRSKEAFSLFEAIEHKD 511
Query: 384 VYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHE 443
+W+ M+SG+AQ+ ALE+F M AGVK N T VS A A+ +K+G+ H
Sbjct: 512 KITWNGMVSGFAQSGLYEEALEVFIKMYQAGVKYNVFTFVSSISASANLADIKQGKQIHA 571
Query: 444 YVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDA 503
V+ T ++ A+I +Y KCGSI A F+ + +R WN II + HG
Sbjct: 572 TVIKTGCTSETEVANALISLYGKCGSIEDAKMQFFEMSERNHV--SWNTIITSCSQHGWG 629
Query: 504 NLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGC 563
L ++ +++ +K N +TFIGVL+ C H GLV+ G YFKSM S + + P HY C
Sbjct: 630 LEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLGYFKSMSSEHGIHPRPDHYAC 689
Query: 564 MVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSH 623
+VD+LGRAGQL+ A + + MP+ A+ ++W TLL+A R+H N+E+GE AAK L L+P
Sbjct: 690 VVDILGRAGQLDRARKFVEEMPVSANAMVWRTLLSACRVHKNIEIGELAAKYLLELEPHD 749
Query: 624 GPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
S VLLSN YA G+W +RK M+D G+++ PG S +
Sbjct: 750 SASYVLLSNAYAVTGKWACRDHVRKMMKDRGVRKEPGRSWI 790
Score = 172 bits (435), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 109/383 (28%), Positives = 198/383 (51%), Gaps = 37/383 (9%)
Query: 222 VSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCD 281
++ N++++ +AK GLV+ AR +FE++ ++D VSW M+ GY + EA+ +Y M C
Sbjct: 78 IAGNLLIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSGYARNGLGEEAVGLYHQMHCS 137
Query: 282 GIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLA 341
G+ P ++ ++SAC +A F +G +H+ + K G C + +
Sbjct: 138 GVVPTPYVLSSVLSACTKAALFEQGRLVHAQVYKQG-SCSETVVG--------------- 181
Query: 342 RLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPN 401
NALIA ++R G + A ++F+ M D +++ +IS +AQ
Sbjct: 182 ---------------NALIALYLRFGSLSLAERVFSEMPYCDRVTFNTLISRHAQCGNGE 226
Query: 402 MALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAII 461
ALE+F M +G P+ +T+ S+ A AS G L +G+ H Y+L ++ + + +++
Sbjct: 227 SALEIFEEMRLSGWTPDCVTIASLLAACASIGDLNKGKQLHSYLLKAGMSPDYIIEGSLL 286
Query: 462 DMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLN 521
D+Y KCG I A E+F DR T+V WN ++ D + ++ + ++ N
Sbjct: 287 DLYVKCGVIVEALEIF-KSGDR-TNVVLWNLMLVAYGQISDLAKSFDLFCQMVAAGVRPN 344
Query: 522 SITFIGVLSTCCHAGLVDLGER-YFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEV 580
T+ +L TC +AG ++LGE+ + S+K+ + E D+ G ++D+ + G L+ A +
Sbjct: 345 EFTYPCLLRTCTYAGEINLGEQIHLLSIKTGF--ESDMYVSGVLIDMYSKYGWLDKARRI 402
Query: 581 IRSMPMKADVVIWGTLLAASRIH 603
+ + K DVV W +++A H
Sbjct: 403 LEVLEAK-DVVSWTSMIAGYVQH 424
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 124/252 (49%), Gaps = 9/252 (3%)
Query: 350 KDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHG 409
+D IA N LI + + G+++ AR++F + RD SW AM+SGYA+N A+ L+H
Sbjct: 75 EDRIAG-NLLIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSGYARNGLGEEAVGLYHQ 133
Query: 410 MVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGS 469
M +GV P + SV A + ++GR H V + A+I +Y + GS
Sbjct: 134 MHCSGVVPTPYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCSETVVGNALIALYLRFGS 193
Query: 470 INTAFEVFYHIR--DRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIG 527
++ A VF + DR T +N +I A G+ L+I+ ++ + +T
Sbjct: 194 LSLAERVFSEMPYCDRVT----FNTLISRHAQCGNGESALEIFEEMRLSGWTPDCVTIAS 249
Query: 528 VLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMK 587
+L+ C G ++ G++ + + PD G ++DL + G + +A E+ +S +
Sbjct: 250 LLAACASIGDLNKGKQLHSYLLKA-GMSPDYIIEGSLLDLYVKCGVIVEALEIFKSGD-R 307
Query: 588 ADVVIWGTLLAA 599
+VV+W +L A
Sbjct: 308 TNVVLWNLMLVA 319
>gi|357146098|ref|XP_003573875.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Brachypodium distachyon]
Length = 652
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 178/485 (36%), Positives = 275/485 (56%), Gaps = 34/485 (7%)
Query: 179 GLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVE 238
G V+ L V + ++ VCSS+ EAR LFD R
Sbjct: 144 GNVLSLGFHADVFVVNAAMHFLAVCSSMAEARKLFDGSHVR------------------- 184
Query: 239 LARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDG-IAPNDVMIVDLISAC 297
D+VSW T+I GY++ EAL M+ M+ DG + P++V ++ ++S
Sbjct: 185 ------------DLVSWNTLIGGYVRRGVPREALEMFWRMVGDGAVTPDEVTMIGVVSGS 232
Query: 298 GRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWN 357
+ G ++H + G C + ++ Y CG + A+ FE K I SW
Sbjct: 233 AQLRDLELGRRLHGYVESHGVRCTVRLMNVVMDMYIKCGDLERAKSVFEGIDKKTIVSWT 292
Query: 358 ALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKP 417
+I G+ + G+++DAR++F+ M +RDV+ W+A+++GY Q ++ AL LFH M +A V+P
Sbjct: 293 TMIVGYAQFGLMDDARKVFDEMPERDVFPWNALMTGYVQCKRGKEALRLFHDMQEAMVEP 352
Query: 418 NEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVF 477
++ITMV++ A + G L+ G W H Y+ ++L+ L ++DMY+KCG+I A VF
Sbjct: 353 DDITMVNLLSACSQLGALEMGMWVHHYIDRRRVSLSVMLGTNLVDMYSKCGNIEKAIRVF 412
Query: 478 YHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGL 537
I ++ W A+I GLA HG A++ +K + + + ++ + ITFIGVLS CCHAGL
Sbjct: 413 KEIPEKNALT--WTAMISGLANHGHADVAIKYFQRMIELGLQPDEITFIGVLSACCHAGL 470
Query: 538 VDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLL 597
V G+ +F M S Y++E +KHY CMVDLLGRAG L++AE ++ +MPM+ D V+WG L
Sbjct: 471 VKEGQEFFSLMVSKYHLERKMKHYSCMVDLLGRAGYLDEAEHLVNTMPMEPDAVVWGALF 530
Query: 598 AASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKR 657
A R+HGN+ +GE+AA L L P VLL+N+YA+A + A +R MR G+++
Sbjct: 531 FACRMHGNITLGEKAAMKLVELDPGDSGIYVLLANMYAEANMRKKADKVRVMMRHLGVEK 590
Query: 658 LPGFS 662
+PG S
Sbjct: 591 VPGCS 595
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 120/483 (24%), Positives = 223/483 (46%), Gaps = 69/483 (14%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
L+ C+ + G + + G ++ F+ N+ ++ A C +++A+ +FD D
Sbjct: 127 LKACARLQERNYGNAVLGNVLSLGFHADVFVVNAAMHFLAVCSSMAEARKLFDGSHVRDL 186
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
V+ N +I GY+R P REALE+F R++
Sbjct: 187 VSWNTLIGGYVRRG-----------VP--------------------REALEMF--WRMV 213
Query: 150 G---VIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSL 206
G V P+EVT+ V+S S L + R LHG V + V + +++MY C L
Sbjct: 214 GDGAVTPDEVTMIGVVSGSAQLRDLELGRRLHGYVESHGVRCTVRLMNVVMDMYIKCGDL 273
Query: 207 VEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVE 266
A+S+F+ + ++ IVSW M+ G+A+ GL++ AR++F+ +P +DV W ++ GY+Q +
Sbjct: 274 ERAKSVFEGIDKKTIVSWTTMIVGYAQFGLMDDARKVFDEMPERDVFPWNALMTGYVQCK 333
Query: 267 RLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQA 326
R EAL ++ M + P+D+ +V+L+SAC + A G+ +H I + +
Sbjct: 334 RGKEALRLFHDMQEAMVEPDDITMVNLLSACSQLGALEMGMWVHHYIDRRRVSLSVMLGT 393
Query: 327 TIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYS 386
++ Y+ CG I A F+ + + +W A+I+G +G
Sbjct: 394 NLVDMYSKCGNIEKAIRVFKEIPEKNALTWTAMISGLANHG------------------- 434
Query: 387 WSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVL 446
++A++ F M++ G++P+EIT + V A +G +KEG+ ++
Sbjct: 435 ------------HADVAIKYFQRMIELGLQPDEITFIGVLSACCHAGLVKEGQEFFSLMV 482
Query: 447 NN-SITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANL 505
+ + + ++D+ + G ++ A + + +V W A+ MHG+ L
Sbjct: 483 SKYHLERKMKHYSCMVDLLGRAGYLDEAEHLVNTMPMEPDAVV-WGALFFACRMHGNITL 541
Query: 506 TLK 508
K
Sbjct: 542 GEK 544
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 93/389 (23%), Positives = 158/389 (40%), Gaps = 72/389 (18%)
Query: 268 LSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQAT 327
++ L +Y ++L P+ + L+ AC R G + ++ GF F+
Sbjct: 102 VTRCLPLYCSLL-RSARPDHLTFPFLLKACARLQERNYGNAVLGNVLSLGFHADVFVVNA 160
Query: 328 IIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSW 387
+HF A C + AR F+ + SWN LI G++R G+
Sbjct: 161 AMHFLAVCSSMAEARKLFDGSHVRDLVSWNTLIGGYVRRGV------------------- 201
Query: 388 SAMISGYAQNEQPNMALELFHGMV-DAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVL 446
P ALE+F MV D V P+E+TM+ V A L+ GR H YV
Sbjct: 202 ------------PREALEMFWRMVGDGAVTPDEVTMIGVVSGSAQLRDLELGRRLHGYVE 249
Query: 447 NNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTT--------------------- 485
++ + L ++DMY KCG + A VF I +T
Sbjct: 250 SHGVRCTVRLMNVVMDMYIKCGDLERAKSVFEGIDKKTIVSWTTMIVGYAQFGLMDDARK 309
Query: 486 --------SVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGL 537
V PWNA++ G L+++ D+++ ++ + IT + +LS C G
Sbjct: 310 VFDEMPERDVFPWNALMTGYVQCKRGKEALRLFHDMQEAMVEPDDITMVNLLSACSQLGA 369
Query: 538 VDLG---ERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWG 594
+++G Y + +V +VD+ + G +E A V + +P K + + W
Sbjct: 370 LEMGMWVHHYIDRRRVSLSVMLGTN----LVDMYSKCGNIEKAIRVFKEIPEK-NALTWT 424
Query: 595 TLLAASRIHGNVEVGERAAKSL--AGLQP 621
+++ HG+ +V + + + GLQP
Sbjct: 425 AMISGLANHGHADVAIKYFQRMIELGLQP 453
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 106/254 (41%), Gaps = 67/254 (26%)
Query: 6 FHSVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLI 65
FH + Q+A ++ D + +V+ L CS A+ G +H I + + + + +L+
Sbjct: 342 FHDM---QEAMVEPDD--ITMVNLLSACSQLGALEMGMWVHHYIDRRRVSLSVMLGTNLV 396
Query: 66 NLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTS 125
++Y+KCG I +A IR VF + P K +++T+
Sbjct: 397 DMYSKCGNIEKA----------------------IR---------VFKEIPEKNALTWTA 425
Query: 126 MIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLM 185
MI G A + A++ F+ M LG+ P+E+T V+S+ H G + E + LM
Sbjct: 426 MISGLANHGHADVAIKYFQRMIELGLQPDEITFIGVLSACCHAGLVKEGQEF----FSLM 481
Query: 186 IDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFE 245
+ + + ER + ++ M++ +AG ++ A L
Sbjct: 482 VSKYHL--------------------------ERKMKHYSCMVDLLGRAGYLDEAEHLVN 515
Query: 246 RIP-SKDVVSWGTM 258
+P D V WG +
Sbjct: 516 TMPMEPDAVVWGAL 529
>gi|225440839|ref|XP_002276333.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 705
Score = 338 bits (868), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 205/645 (31%), Positives = 322/645 (49%), Gaps = 97/645 (15%)
Query: 18 QNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQA 77
+ +Y L V +R C + G+ IH +++K GL+ + F+ +L+++Y
Sbjct: 27 RPDNYTLPFV--IRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMY--------- 75
Query: 78 KSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWR 137
V C + DAR +FDK + V++T MI G+A+
Sbjct: 76 ------------VKCR----------EIEDARFLFDKMQERDLVTWTVMIGGYAECGKAN 113
Query: 138 EALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLL 197
E+L +F MR GV+P++V + +V+ + LG + + R++ + + VI+ T ++
Sbjct: 114 ESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMI 173
Query: 198 NMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGT 257
+MY AK G VE ARE+F+R+ K+V+SW
Sbjct: 174 DMY-------------------------------AKCGCVESAREIFDRMEEKNVISWSA 202
Query: 258 MIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAG 317
MI Y + +AL ++R ML G+ P+ + + L+ AC G IH I+ K G
Sbjct: 203 MIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACSDLKNLQMGRLIHHIVYKFG 262
Query: 318 FDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFN 377
D F+ A ++ Y C I EDAR LF+
Sbjct: 263 LDLDHFVCAALVDMYGKCREI-------------------------------EDARFLFD 291
Query: 378 NMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKE 437
M +RD+ +W+ MI GYA+ N +L LF M + GV P+++ MV+V A A G + +
Sbjct: 292 KMPERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHK 351
Query: 438 GRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGL 497
R +Y+ L+ L A+IDM+AKCG + +A E+F + ++ +V W+A+I
Sbjct: 352 ARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEK--NVISWSAMIAAY 409
Query: 498 AMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPD 557
HG L ++ + + I N IT + +L C HAGLV+ G R+F M Y+V D
Sbjct: 410 GYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRAD 469
Query: 558 LKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLA 617
+KHY C+VDLLGRAG+L++A ++I SM ++ D +WG L A R H +V + E+AA SL
Sbjct: 470 VKHYTCVVDLLGRAGRLDEALKLIESMTVEKDEGLWGAFLGACRTHKDVVLAEKAATSLL 529
Query: 618 GLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
LQP + +LLSNIYA+AGRWED R M +K++PG++
Sbjct: 530 ELQPQNPGHYILLSNIYANAGRWEDVAKTRDLMSQRRLKKIPGWT 574
>gi|356528966|ref|XP_003533068.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Glycine max]
Length = 712
Score = 338 bits (868), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 203/638 (31%), Positives = 331/638 (51%), Gaps = 69/638 (10%)
Query: 27 VSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCST 86
+S L C + + Q +QIHS K GL S+ Q +I A C K ++
Sbjct: 11 ISLLEKCKS---MYQLKQIHSHTIKMGLSSDPLFQKRVI---AFCCAHESGKMIY----- 59
Query: 87 LDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDM 146
AR+VFD P + +MI G+++ + + + ++ M
Sbjct: 60 ---------------------ARQVFDAIPQPTLFIWNTMIKGYSRINHPQNGVSMYLLM 98
Query: 147 RILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSL 206
+ P+ T ++ + ++L +K D + + ++M+ +C
Sbjct: 99 LASNIKPDRFTFPFLLKGFTRNMALQYGKVLLNHAVKHGFDSNLFVQKAFIHMFSLCR-- 156
Query: 207 VEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVE 266
LV+LAR++F+ + +VV+W M+ GY +V+
Sbjct: 157 -----------------------------LVDLARKVFDMGDAWEVVTWNIMLSGYNRVK 187
Query: 267 RLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQA 326
+ ++ ++ M G++PN V +V ++SAC + G I+ I + ++
Sbjct: 188 QFKKSKMLFIEMEKRGVSPNSVTLVLMLSACSKLKDLEGGKHIYKYINGGIVERNLILEN 247
Query: 327 TIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYS 386
+I +AACG ++ A+ F+ + SW +++ GF G I+ AR+ F+ + +RD S
Sbjct: 248 VLIDMFAACGEMDEAQSVFDNMKNRDVISWTSIVTGFANIGQIDLARKYFDQIPERDYVS 307
Query: 387 WSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVL 446
W+AMI GY + + AL LF M + VKP+E TMVS+ A A G L+ G W Y+
Sbjct: 308 WTAMIDGYLRMNRFIEALALFREMQMSNVKPDEFTMVSILTACAHLGALELGEWVKTYID 367
Query: 447 NNSITLNDNLSAAIIDMYAKCGSINTAFEVF--YHIRDRTTSVSPWNAIICGLAMHGDAN 504
NSI + + A+IDMY KCG++ A +VF H +D+ T W A+I GLA++G
Sbjct: 368 KNSIKNDTFVGNALIDMYFKCGNVGKAKKVFKEMHHKDKFT----WTAMIVGLAINGHGE 423
Query: 505 LTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCM 564
L ++S++ + +I + IT+IGVL C HAG+V+ G+ +F SM + ++P++ HYGCM
Sbjct: 424 EALAMFSNMIEASITPDEITYIGVLCACTHAGMVEKGQSFFISMTMQHGIKPNVTHYGCM 483
Query: 565 VDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHG 624
VDLLGRAG+LE+A EVI +MP+K + ++WG+LL A R+H NV++ E AAK + L+P +G
Sbjct: 484 VDLLGRAGRLEEAHEVIVNMPVKPNSIVWGSLLGACRVHKNVQLAEMAAKQILELEPENG 543
Query: 625 PSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
VLL NIYA RWE+ +RK M + G+K+ PG S
Sbjct: 544 AVYVLLCNIYAACKRWENLRQVRKLMMERGIKKTPGCS 581
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/373 (24%), Positives = 174/373 (46%), Gaps = 62/373 (16%)
Query: 20 SDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKS 79
S + LV L CS + G+ I+ I +E N ++N LI+++A CG + +A+S
Sbjct: 205 SPNSVTLVLMLSACSKLKDLEGGKHIYKYINGGIVERNLILENVLIDMFAACGEMDEAQS 264
Query: 80 MFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREA 139
+FD+ D ++ +++G+ +++ AR+ FD+ P + VS+T+MI G+ + + + EA
Sbjct: 265 VFDNMKNRDVISWTSIVTGFANIGQIDLARKYFDQIPERDYVSWTAMIDGYLRMNRFIEA 324
Query: 140 LEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNM 199
L +FR+M++ V P+E T+ S++++ HLG + + + K I + L++M
Sbjct: 325 LALFREMQMSNVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNSIKNDTFVGNALIDM 384
Query: 200 YCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMI 259
Y C ++ +A+ +F EM ++ +W M+ G A I
Sbjct: 385 YFKCGNVGKAKKVFKEMHHKDKFTWTAMIVGLA--------------------------I 418
Query: 260 DGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFD 319
+G+ + EAL M+ M+ I P+++ + ++ AC A +G
Sbjct: 419 NGHGE-----EALAMFSNMIEASITPDEITYIGVLCACTHAGMVEKGQSF---------- 463
Query: 320 CYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNM 379
FI T+ H GIK ++ + ++ R G +E+A ++ NM
Sbjct: 464 ---FISMTMQH-----------------GIKPNVTHYGCMVDLLGRAGRLEEAHEVIVNM 503
Query: 380 Q-KRDVYSWSAMI 391
K + W +++
Sbjct: 504 PVKPNSIVWGSLL 516
>gi|328774763|gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygrometrica]
Length = 820
Score = 338 bits (867), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 208/640 (32%), Positives = 325/640 (50%), Gaps = 95/640 (14%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
+ VS L CS+ A++ G+++H + ++GL +N + N+LI++YAKCG +
Sbjct: 145 KFTFVSILSACSSPAALNWGREVHVRVMEAGLANNATVGNALISMYAKCGSV-------- 196
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
DAR VFD + VS+T++ +A++ +E+L+
Sbjct: 197 -----------------------RDARRVFDAMASRDEVSWTTLTGAYAESGYAQESLKT 233
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
+ M GV P+ +T +V+S+ L + + + +H +++ V +ST L MY
Sbjct: 234 YHAMLQEGVRPSRITYMNVLSACGSLAALEKGKQIHAQIVESEHHSDVRVSTALTKMYIK 293
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
C G V+ ARE+FE +P++DV++W TMI G
Sbjct: 294 C-------------------------------GAVKDAREVFECLPNRDVIAWNTMIGGL 322
Query: 263 LQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD 322
+ +L EA M+ ML + +AP+ V + ++SAC R G +IH+ VK G
Sbjct: 323 VDSGQLEEAHGMFHRMLKECVAPDRVTYLAILSACARPGGLACGKEIHARAVKDGL---- 378
Query: 323 FIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKR 382
++ ++F NALI + + G ++DARQ+F+ M KR
Sbjct: 379 -----------------VSDVRFG----------NALINMYSKAGSMKDARQVFDRMPKR 411
Query: 383 DVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAH 442
DV SW+A++ GYA Q + F M+ GV+ N+IT + V A ++ LK G+ H
Sbjct: 412 DVVSWTALVGGYADCGQVVESFSTFKKMLQQGVEANKITYMCVLKACSNPVALKWGKEIH 471
Query: 443 EYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGD 502
V+ I + ++ A++ MY KCGS+ A V + R V WN +I GLA +G
Sbjct: 472 AEVVKAGIFADLAVANALMSMYFKCGSVEDAIRVSEGMSTR--DVVTWNTLIGGLAQNGR 529
Query: 503 ANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYG 562
L+ + ++ ++ N+ TF+ V+S C LV+ G R F SM+ Y + P KHY
Sbjct: 530 GLEALQKFEVMKSEEMRPNATTFVNVMSACRVRNLVEEGRRQFASMRKDYGIVPTEKHYA 589
Query: 563 CMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPS 622
CMVD+L RAG L +AE+VI +MP K +WG LLAA R HGNVE+GE+AA+ L+P
Sbjct: 590 CMVDILARAGHLGEAEDVILTMPFKPSAAMWGALLAACRAHGNVEIGEQAAEQCLKLEPQ 649
Query: 623 HGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
+ + V LS IYA AG W D +RK M++ G+K+ PG S
Sbjct: 650 NAGTYVSLSFIYAAAGMWRDVAKLRKLMKERGVKKEPGRS 689
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 119/478 (24%), Positives = 213/478 (44%), Gaps = 70/478 (14%)
Query: 121 VSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGL 180
V +SMI D W +V + + G + ++ S V + + +H
Sbjct: 12 VDKSSMIP--TSTDGWYAPADVLQYLHQKGSQVDSYDYVKLLQSCVKAKDLAVGKQVHEH 69
Query: 181 VIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELA 240
+++ + V I LL +Y C S+ EAR LFD+ +++VSWNVM++G+A GL +
Sbjct: 70 ILRFGMKPNVYIINTLLKLYVHCGSVNEARRLFDKFSNKSVVSWNVMISGYAHRGLGQ-- 127
Query: 241 RELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRA 300
EA ++ M +G+ P+ V ++SAC
Sbjct: 128 -----------------------------EAFNLFTLMQQEGLEPDKFTFVSILSACSSP 158
Query: 301 MAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALI 360
A G ++H +++AG + +I YA CG + AR
Sbjct: 159 AALNWGREVHVRVMEAGLANNATVGNALISMYAKCGSVRDAR------------------ 200
Query: 361 AGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEI 420
++F+ M RD SW+ + YA++ +L+ +H M+ GV+P+ I
Sbjct: 201 -------------RVFDAMASRDEVSWTTLTGAYAESGYAQESLKTYHAMLQEGVRPSRI 247
Query: 421 TMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHI 480
T ++V A S L++G+ H ++ + + +S A+ MY KCG++ A EVF +
Sbjct: 248 TYMNVLSACGSLAALEKGKQIHAQIVESEHHSDVRVSTALTKMYIKCGAVKDAREVFECL 307
Query: 481 RDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDL 540
+R V WN +I GL G ++ + K + + +T++ +LS C G +
Sbjct: 308 PNR--DVIAWNTMIGGLVDSGQLEEAHGMFHRMLKECVAPDRVTYLAILSACARPGGLAC 365
Query: 541 G-ERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLL 597
G E + +++K + D++ ++++ +AG ++DA +V MP K DVV W L+
Sbjct: 366 GKEIHARAVKD--GLVSDVRFGNALINMYSKAGSMKDARQVFDRMP-KRDVVSWTALV 420
>gi|225435554|ref|XP_002283117.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 624
Score = 338 bits (867), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 172/483 (35%), Positives = 276/483 (57%), Gaps = 10/483 (2%)
Query: 192 ISTNLLNMYCV--CSSLVEARSLFDEMKERNIVSWNVMLNGFAKA------GLVELAREL 243
+++N L ++ + C S+ + + + ++ + N K G + A +L
Sbjct: 12 LNSNQLQLFSLESCKSMNQIKQTHAHLITTGLILHPITANKLLKVLIASSFGSLSYAHQL 71
Query: 244 FERIPSKDVVSWGTMIDGYLQVERLSE-ALTMYRAML-CDGIAPNDVMIVDLISACGRAM 301
F++IP DV + TMI + + S ++ ++ +M+ G PN V + ACG +
Sbjct: 72 FDQIPKPDVFIYNTMIKAHAVIPTSSHNSMRIFLSMVRVSGFLPNRYTFVFVFKACGNGL 131
Query: 302 AFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIA 361
EG QI +K G + F+ +I YA G ++ AR F+ + + SWN +I
Sbjct: 132 GVLEGEQIRVHAIKIGLESNLFVTNAMIRMYANWGLVDEARRVFDWSLDQDLYSWNIMIG 191
Query: 362 GFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEIT 421
G++ +G I A+++F+ M +RDV SW+ +I+GY Q AL+LFH M+ G PNE T
Sbjct: 192 GYVGSGEIGRAKEMFDEMSERDVVSWTTIIAGYVQVGCFKEALDLFHEMLQTGPPPNEFT 251
Query: 422 MVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIR 481
+ S A A+ L +GRW H Y+ + I +N+ L A+++DMYAKCG I+ A +VF+
Sbjct: 252 LASALAACANLVALDQGRWIHVYIDKSEIKMNERLLASLLDMYAKCGEIDFAAKVFHDEY 311
Query: 482 DRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLG 541
V PWNA+I G AMHG + + ++ ++ + N +TF+ +L+ C H LV+ G
Sbjct: 312 GLKLKVWPWNAMIGGYAMHGKSKEAIDLFEQMKVEKVSPNKVTFVALLNACSHGKLVEEG 371
Query: 542 ERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASR 601
YFKSM S Y +EP+++HYGCMVDLLGR+G L++AEE + +MPM D IWG LL A R
Sbjct: 372 RGYFKSMASSYGIEPEIEHYGCMVDLLGRSGLLKEAEETVFNMPMAPDATIWGALLGACR 431
Query: 602 IHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGF 661
IH ++E G+R K + L H VLL+N+Y+ +G+W++A ++R+++ G K+ PG
Sbjct: 432 IHKDIERGQRIGKIIKELDSDHIGCHVLLANLYSASGQWDEAKAVRQKIEVSGRKKTPGC 491
Query: 662 SGV 664
S +
Sbjct: 492 SSI 494
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 119/464 (25%), Positives = 211/464 (45%), Gaps = 47/464 (10%)
Query: 50 FKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCST----LDPVACNIMISGYIRND-- 103
FK L SN Q L +L + C ++Q K T L P+ N ++ I +
Sbjct: 8 FKKPLNSN---QLQLFSLES-CKSMNQIKQTHAHLITTGLILHPITANKLLKVLIASSFG 63
Query: 104 RLNDAREVFDKTPIKCCVSYTSMIMGFAQ-NDCWREALEVFRDM-RILGVIPNEVTLASV 161
L+ A ++FD+ P Y +MI A ++ +F M R+ G +PN T V
Sbjct: 64 SLSYAHQLFDQIPKPDVFIYNTMIKAHAVIPTSSHNSMRIFLSMVRVSGFLPNRYTFVFV 123
Query: 162 ISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNI 221
+ + G+ E + IK+ ++ + ++ ++ MY + EAR +FD ++++
Sbjct: 124 FKACGNGLGVLEGEQIRVHAIKIGLESNLFVTNAMIRMYANWGLVDEARRVFDWSLDQDL 183
Query: 222 VSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCD 281
SWN+M+ G+ +G + A+E+F+ + +DVVSW T+I GY+QV EAL ++ ML
Sbjct: 184 YSWNIMIGGYVGSGEIGRAKEMFDEMSERDVVSWTTIIAGYVQVGCFKEALDLFHEMLQT 243
Query: 282 GIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLA 341
G PN+ + ++AC +A +G IH I K+ + + A+++ YA CG I+ A
Sbjct: 244 GPPPNEFTLASALAACANLVALDQGRWIHVYIDKSEIKMNERLLASLLDMYAKCGEIDFA 303
Query: 342 RLQF--ELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQ 399
F E G+K + WNA+I G+ +G ++A LF M+
Sbjct: 304 AKVFHDEYGLKLKVWPWNAMIGGYAMHGKSKEAIDLFEQMKVEK---------------- 347
Query: 400 PNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGR-WAHEYVLNNSITLNDNLSA 458
V PN++T V++ A + ++EGR + + I
Sbjct: 348 ---------------VSPNKVTFVALLNACSHGKLVEEGRGYFKSMASSYGIEPEIEHYG 392
Query: 459 AIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGD 502
++D+ + G + A E +++ + W A++ +H D
Sbjct: 393 CMVDLLGRSGLLKEAEETVFNM-PMAPDATIWGALLGACRIHKD 435
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 102/370 (27%), Positives = 173/370 (46%), Gaps = 64/370 (17%)
Query: 25 ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSC 84
V + C + V +G+QI K GLESN F+ N++I +YA GL+ +A+ +FD
Sbjct: 119 TFVFVFKACGNGLGVLEGEQIRVHAIKIGLESNLFVTNAMIRMYANWGLVDEARRVFDWS 178
Query: 85 STLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFR 144
D + NIMI GY+ + + A+E+FD+ + VS+T++I G+ Q C++EAL++F
Sbjct: 179 LDQDLYSWNIMIGGYVGSGEIGRAKEMFDEMSERDVVSWTTIIAGYVQVGCFKEALDLFH 238
Query: 145 DMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCS 204
+M G PNE TLAS +++ +L + + R +H + K I + +LL+MY C
Sbjct: 239 EMLQTGPPPNEFTLASALAACANLVALDQGRWIHVYIDKSEIKMNERLLASLLDMYAKCG 298
Query: 205 SLVEARSLF-DEMKER-NIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
+ A +F DE + + WN M+ G+A G + A +LFE+
Sbjct: 299 EIDFAAKVFHDEYGLKLKVWPWNAMIGGYAMHGKSKEAIDLFEQ---------------- 342
Query: 263 LQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD 322
++VE++S PN V V L++AC H +V+
Sbjct: 343 MKVEKVS---------------PNKVTFVALLNACS-----------HGKLVEE------ 370
Query: 323 FIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQ-LFNNMQK 381
GR + GI+ I + ++ R+G++++A + +FN
Sbjct: 371 -------------GRGYFKSMASSYGIEPEIEHYGCMVDLLGRSGLLKEAEETVFNMPMA 417
Query: 382 RDVYSWSAMI 391
D W A++
Sbjct: 418 PDATIWGALL 427
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 127/307 (41%), Gaps = 81/307 (26%)
Query: 3 LDHFHSVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQN 62
LD FH + + E L SAL C+ +A+ QG+ IH I KS ++ N +
Sbjct: 234 LDLFHEMLQTGPP-----PNEFTLASALAACANLVALDQGRWIHVYIDKSEIKMNERLLA 288
Query: 63 SLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCV- 121
SL+++YAKCG I A +F D+ +K V
Sbjct: 289 SLLDMYAKCGEIDFAAKVFH------------------------------DEYGLKLKVW 318
Query: 122 SYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLV 181
+ +MI G+A + +EA+++F M++ V PN+VT +++++ C HG +
Sbjct: 319 PWNAMIGGYAMHGKSKEAIDLFEQMKVEKVSPNKVTFVALLNA---------CS--HGKL 367
Query: 182 IKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMK-----ERNIVSWNVMLNGFAKAGL 236
++ E R F M E I + M++ ++GL
Sbjct: 368 VE------------------------EGRGYFKSMASSYGIEPEIEHYGCMVDLLGRSGL 403
Query: 237 VELARELFERIP-SKDVVSWGTMIDG---YLQVERLSEALTMYRAMLCDGIAPNDVMIVD 292
++ A E +P + D WG ++ + +ER + + + D I + V++ +
Sbjct: 404 LKEAEETVFNMPMAPDATIWGALLGACRIHKDIERGQRIGKIIKELDSDHIGCH-VLLAN 462
Query: 293 LISACGR 299
L SA G+
Sbjct: 463 LYSASGQ 469
>gi|218198855|gb|EEC81282.1| hypothetical protein OsI_24392 [Oryza sativa Indica Group]
Length = 1349
Score = 338 bits (867), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 186/573 (32%), Positives = 314/573 (54%), Gaps = 20/573 (3%)
Query: 105 LNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALE---------VFRDMRILGVIPNE 155
L A +FD+ P ++ + A C+R +FR MR V P+
Sbjct: 53 LRYALHLFDRMPA------STFLFDTALRACFRAGTSSGDPDIPFVLFRRMRRAAVRPDG 106
Query: 156 VTLASVIS-SSVHLGGIWECRMLHGLVIKLMIDGFV-IISTNLLNMYCVCSSLVEARSLF 213
T + SS C MLH ++ M+ ++ +L++MY + R F
Sbjct: 107 FTFHFLFKCSSSSRPRALLCTMLHAACLRTMLPSAAPFVANSLIHMYTELGLAGDVRRAF 166
Query: 214 DEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALT 273
DE+ ++ VSW ++++G AK G++ AR L + P +DV+SW ++I Y + +R EA+
Sbjct: 167 DEIPVKDAVSWTMVISGLAKMGMLSDARLLLAQAPVRDVISWTSLIAAYSRADRAKEAVD 226
Query: 274 MYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYA 333
++ ML +GIAP+DV ++ ++SAC + G +HS++ + G + + +I YA
Sbjct: 227 CFKNMLSEGIAPDDVTVIGVLSACSQLKDLELGCSLHSLVKEKGMSMSENLVVALIDMYA 286
Query: 334 ACGRINLARLQFE-LGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMIS 392
CG AR F+ +G SWNA+I G+ ++G ++ AR LF+ M+ RD+ ++++MI+
Sbjct: 287 KCGDFGHAREVFDAVGRGRRPQSWNAIIDGYCKHGHVDVARSLFDQMEVRDIITFNSMIT 346
Query: 393 GYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITL 452
GY + Q AL LF M ++ + T+VS+ A AS G L +GR H + +
Sbjct: 347 GYIHSGQLREALLLFMNMRRHDLRVDNFTVVSLLSACASLGALPQGRALHACIELRLVET 406
Query: 453 NDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSD 512
+ + A++DMY KCG +N A VF + R V W A+I GLA +G L+ +
Sbjct: 407 DIYIGTALLDMYMKCGRVNEATIVFQRMGKR--DVHAWTAMIAGLAFNGMGKAGLEYFYQ 464
Query: 513 LEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAG 572
+ + N +++I VL+ C H+ L++ G YF M+ +YN+ P ++HYGCM+DLLGR+G
Sbjct: 465 MRCDGFQPNPVSYIAVLTACSHSCLLNEGRLYFDEMRILYNIHPQIEHYGCMIDLLGRSG 524
Query: 573 QLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSN 632
L++A +++++MPM+ + VIW ++L+A R+H +++ + AA+ L ++P V L N
Sbjct: 525 LLDEAMDLVKTMPMQPNSVIWASILSACRVHKRIDLAQCAAEHLLKIEPDEDAVYVQLYN 584
Query: 633 IYADAGRWEDAFSIRKEMRDCGMKRLPGFSGVV 665
I D+ +WEDA IR M + +K+ G+S V
Sbjct: 585 ICIDSRKWEDASKIRMLMEERQVKKTAGYSSVT 617
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 133/489 (27%), Positives = 241/489 (49%), Gaps = 42/489 (8%)
Query: 45 IHSLIFKSGLESNT-FIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRND 103
+H+ ++ L S F+ NSLI++Y + GL + FD D V+ ++ISG +
Sbjct: 129 LHAACLRTMLPSAAPFVANSLIHMYTELGLAGDVRRAFDEIPVKDAVSWTMVISGLAKMG 188
Query: 104 RLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVIS 163
L+DAR + + P++ +S+TS+I +++ D +EA++ F++M G+ P++VT+ V+S
Sbjct: 189 MLSDARLLLAQAPVRDVISWTSLIAAYSRADRAKEAVDCFKNMLSEGIAPDDVTVIGVLS 248
Query: 164 SSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEM-KERNIV 222
+ L + LH LV + + + L++MY C AR +FD + + R
Sbjct: 249 ACSQLKDLELGCSLHSLVKEKGMSMSENLVVALIDMYAKCGDFGHAREVFDAVGRGRRPQ 308
Query: 223 SWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDG 282
SWN +++G+ K G V++AR LF+++ +D++++ +MI GY+ +L EAL ++ M
Sbjct: 309 SWNAIIDGYCKHGHVDVARSLFDQMEVRDIITFNSMITGYIHSGQLREALLLFMNMRRHD 368
Query: 283 IAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLAR 342
+ ++ +V L+SAC A +G +H+ I + +I ++ Y CGR+N A
Sbjct: 369 LRVDNFTVVSLLSACASLGALPQGRALHACIELRLVETDIYIGTALLDMYMKCGRVNEAT 428
Query: 343 LQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNM 402
+ F+ K + +W A+IAG NGM G A
Sbjct: 429 IVFQRMGKRDVHAWTAMIAGLAFNGM------------------------GKA------- 457
Query: 403 ALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGR-WAHEYVLNNSITLNDNLSAAII 461
LE F+ M G +PN ++ ++V A + S L EGR + E + +I +I
Sbjct: 458 GLEYFYQMRCDGFQPNPVSYIAVLTACSHSCLLNEGRLYFDEMRILYNIHPQIEHYGCMI 517
Query: 462 DMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLT-------LKIYSDLE 514
D+ + G ++ A ++ + + SV W +I+ +H +L LKI D +
Sbjct: 518 DLLGRSGLLDEAMDLVKTMPMQPNSVI-WASILSACRVHKRIDLAQCAAEHLLKIEPDED 576
Query: 515 KRNIKLNSI 523
++L +I
Sbjct: 577 AVYVQLYNI 585
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 148/639 (23%), Positives = 276/639 (43%), Gaps = 107/639 (16%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
L CS + A+ Q+H + GL N F+ ++L+N Y + S+F +
Sbjct: 804 LGVCSTYEAL----QLHGRVLALGLCCNPFVGSALVNHYMHVESPHASLSLFRELPLQNT 859
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
CN+++ G + N +L + + CC F DMR
Sbjct: 860 AMCNVVLRG-LGNLKLTEE--------LICC----------------------FLDMRRQ 888
Query: 150 GVIPNEVTLASVISSSVHLGGIW--ECRMLHGLVIKL-MIDGFVIISTNLLNMYCVCSSL 206
+ N ++ + + G W + R LHG+V+K I + +S +L+++Y
Sbjct: 889 YLELNGLSYCYAMKG-CYQNGEWLEQGRQLHGVVLKAGWIPSNIFLSNSLVDLYSAIGDS 947
Query: 207 VEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVE 266
V D +K N I S+DV+SW +++ Y
Sbjct: 948 V------DTVKALN-------------------------DILSEDVISWNSILSMYADRG 976
Query: 267 RLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDF-IQ 325
+ EA+ + ML G P+ V L++ G+ + G+QIH I+ K GF C +Q
Sbjct: 977 HMKEAVYYLKQMLWHGKMPSIRSFVSLLALSGKTGDWQLGVQIHGIVHKLGFSCSSVHVQ 1036
Query: 326 ATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVY 385
T+I Y C DH + +FN + +
Sbjct: 1037 TTLIDMYGKCCCF------------DH-------------------SLAIFNEIPSIALE 1065
Query: 386 SWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIA--SSGTLKEGRWAHE 443
+++I+ + + ALE+ H M+ GV P+++T + AI+ +S +L + H
Sbjct: 1066 CCNSLITSSLRCNMFDAALEILHCMIVEGVTPDDVTFSATMKAISLSASPSLTSCQMLHS 1125
Query: 444 YVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDA 503
++ ++ + +++I YA G ++++ +F + D +V + AII A +GD
Sbjct: 1126 CLVKLGFEMDMAVCSSLITAYACAGQLSSSHLIFEGLLD--PNVICFTAIISACARYGDG 1183
Query: 504 NLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGC 563
++++ + +K +++TF+ ++ C AG+ + G + M++ ++PD +H+ C
Sbjct: 1184 ARAMELFDQMVSSGLKPDNVTFLCAIAGCDQAGMFEEGRLVIELMRASRELDPDERHFAC 1243
Query: 564 MVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSH 623
MV+LL R G +++A E++ P++ W +LL + + HG +G+RAA L +
Sbjct: 1244 MVNLLSRDGFVKEAMEMMEQSPLRHYTKAWSSLLQSCKAHGENVLGKRAANMLIDVGRKD 1303
Query: 624 GPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
+ + +SN + D G E A I KEM + + G S
Sbjct: 1304 PATTLQVSNFFNDIGDRETALRI-KEMTNVKEVKKSGHS 1341
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 88/383 (22%), Positives = 172/383 (44%), Gaps = 63/383 (16%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
++ ++ L CS + G +HSL+ + G+ + + +LI++YAKCG A+ +FD
Sbjct: 240 DVTVIGVLSACSQLKDLELGCSLHSLVKEKGMSMSENLVVALIDMYAKCGDFGHAREVFD 299
Query: 83 SCST-LDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALE 141
+ P + N +I GY ++ ++ AR +FD+ ++ +++ SMI G+ + REAL
Sbjct: 300 AVGRGRRPQSWNAIIDGYCKHGHVDVARSLFDQMEVRDIITFNSMITGYIHSGQLREALL 359
Query: 142 VFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYC 201
+F +MR + + T+ S++S+ LG + + R LH + +++ + I T LL+MY
Sbjct: 360 LFMNMRRHDLRVDNFTVVSLLSACASLGALPQGRALHACIELRLVETDIYIGTALLDMYM 419
Query: 202 VCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDG 261
C + EA +F M +R++ +W M+ G A G+ + E F +
Sbjct: 420 KCGRVNEATIVFQRMGKRDVHAWTAMIAGLAFNGMGKAGLEYFYQ--------------- 464
Query: 262 YLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCY 321
M CDG PN V + +++AC + E
Sbjct: 465 ----------------MRCDGFQPNPVSYIAVLTACSHSCLLNE---------------- 492
Query: 322 DFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ- 380
GR+ ++ I I + +I R+G++++A L M
Sbjct: 493 --------------GRLYFDEMRILYNIHPQIEHYGCMIDLLGRSGLLDEAMDLVKTMPM 538
Query: 381 KRDVYSWSAMISGYAQNEQPNMA 403
+ + W++++S +++ ++A
Sbjct: 539 QPNSVIWASILSACRVHKRIDLA 561
Score = 45.8 bits (107), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 53/272 (19%), Positives = 109/272 (40%), Gaps = 50/272 (18%)
Query: 342 RLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPN 401
R + ++D +AS N +I GFIR+G+ + AR VY W
Sbjct: 752 RSSVTMAVRD-VASLNRMITGFIRDGLADRARA---------VYRW-------------- 787
Query: 402 MALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAII 461
MV +G++ T F I + E H VL + N + +A++
Sbjct: 788 --------MVASGIRETPHT----FSTILGVCSTYEALQLHGRVLALGLCCNPFVGSALV 835
Query: 462 DMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLK-----IYSDLEKR 516
+ Y S + + +F + + T+ +C + + G NL L + D+ ++
Sbjct: 836 NHYMHVESPHASLSLFRELPLQNTA-------MCNVVLRGLGNLKLTEELICCFLDMRRQ 888
Query: 517 NIKLNSITFIGVLSTCCHAG-LVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLE 575
++LN +++ + C G ++ G + + + ++ +VDL G
Sbjct: 889 YLELNGLSYCYAMKGCYQNGEWLEQGRQLHGVVLKAGWIPSNIFLSNSLVDLYSAIGDSV 948
Query: 576 DAEEVIRSMPMKADVVIWGTLLAASRIHGNVE 607
D + + + + DV+ W ++L+ G+++
Sbjct: 949 DTVKALNDI-LSEDVISWNSILSMYADRGHMK 979
>gi|297738890|emb|CBI28135.3| unnamed protein product [Vitis vinifera]
Length = 1974
Score = 338 bits (867), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 207/681 (30%), Positives = 345/681 (50%), Gaps = 105/681 (15%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
L + L+ C + + G+ +H + K G + F+ +SL+++Y KCG+
Sbjct: 1278 FVLPNVLKACGSLQLIGLGKGVHGYVLKMGFGACVFVSSSLVDMYGKCGV---------- 1327
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
L DAR+VFD K V++ SMI+G+ QN +EA++VF
Sbjct: 1328 ---------------------LEDARKVFDSMVEKNVVTWNSMIVGYVQNGLNQEAIDVF 1366
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
DMR+ G+ P VT+AS +S+S +L + E + H + I +D I+ ++++N Y
Sbjct: 1367 YDMRVEGIEPTRVTVASFLSASANLDALIEGKQGHAIAILNSLDLDNILGSSIINFY--- 1423
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYL 263
+K GL+E A +F R+ KDVV+W +I Y+
Sbjct: 1424 ----------------------------SKVGLIEDAELVFSRMLEKDVVTWNLLISSYV 1455
Query: 264 QVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDF 323
Q ++ +AL M M + + + V + ++SA G + H ++ +
Sbjct: 1456 QHHQVGKALNMCHLMRSENLRFDSVTLSSILSASAVTSNIKLGKEGHCYCIRRNLESDVV 1515
Query: 324 IQATIIHFYAACGRINLAR------------------------------------LQFEL 347
+ +II YA C RI+ AR +QF+
Sbjct: 1516 VANSIIDMYAKCERIDDARKVFDSTTERDLVLWNTLLAAYAQVGLSGEALKLFYQMQFD- 1574
Query: 348 GIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ----KRDVYSWSAMISGYAQNEQPNMA 403
+ ++ SWN++I GF+RNG + +A+ +F+ MQ + ++ +W+ +ISG AQ+ A
Sbjct: 1575 SVPPNVISWNSVILGFLRNGQVNEAKDMFSQMQSLGFQPNLITWTTLISGLAQSGFGYEA 1634
Query: 404 LELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDM 463
+ F M +AG++P+ ++ SV A +L GR H ++ + L+ ++ +++DM
Sbjct: 1635 ILFFQKMQEAGIRPSIASITSVLLACTDIPSLWYGRAIHGFITRHEFCLSVPVATSLVDM 1694
Query: 464 YAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSI 523
YAKCGSI+ A +VF+ + + + +NA+I A+HG A L ++ L+K I+ +SI
Sbjct: 1695 YAKCGSIDEAKKVFHMMSSKELPI--YNAMISAYALHGQAVEALALFKHLQKEGIEPDSI 1752
Query: 524 TFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRS 583
TF +LS C HAGLV+ G F M S +N+ P ++HYGC+V LL R G L++A +I +
Sbjct: 1753 TFTSILSACSHAGLVNEGLNLFADMVSKHNMNPIMEHYGCVVSLLSRCGNLDEALRLILT 1812
Query: 584 MPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDA 643
MP + D I G+LL A R H +E+GE +K L L+PS+ + V LSN YA AGRW +
Sbjct: 1813 MPFQPDAHILGSLLTACREHHEIELGEYLSKHLFKLEPSNSGNYVALSNAYAAAGRWVEV 1872
Query: 644 FSIRKEMRDCGMKRLPGFSGV 664
++R M+ G+++ PG S +
Sbjct: 1873 SNMRDLMKVRGLRKNPGCSWI 1893
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 141/548 (25%), Positives = 241/548 (43%), Gaps = 104/548 (18%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSG--LESNTFIQNSLINLYAKCGLISQAKSMFDSCSTL 87
L+ C A+ GQQIH+ I K+G N +++ L+ YAKC A +F
Sbjct: 1181 LQGCVYERALHTGQQIHARILKNGDFFAKNEYVETKLVVFYAKCDFPEVAVRLFH----- 1235
Query: 88 DPVACNIMISGYIRNDRLNDAREVFDKTPI---KCCVSYTSMIMGFAQNDCWREALEVFR 144
RL R VF I +C MGF++ +AL F
Sbjct: 1236 ----------------RLR-VRNVFSWAAIVGLQCR-------MGFSE-----DALLGFI 1266
Query: 145 DMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCS 204
+M+ GV P+ L +V+ + L I + +HG V+K+ V +S++L++MY C
Sbjct: 1267 EMQENGVFPDNFVLPNVLKACGSLQLIGLGKGVHGYVLKMGFGACVFVSSSLVDMYGKCG 1326
Query: 205 SLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQ 264
L +AR +FD M E+N+V+WN M+ G+ + GL +
Sbjct: 1327 VLEDARKVFDSMVEKNVVTWNSMIVGYVQNGLNQ-------------------------- 1360
Query: 265 VERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFI 324
EA+ ++ M +GI P V + +SA A EG Q H+I + D + +
Sbjct: 1361 -----EAIDVFYDMRVEGIEPTRVTVASFLSASANLDALIEGKQGHAIAILNSLDLDNIL 1415
Query: 325 QATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDV 384
++II+FY+ G I A L F ++ + +WN L
Sbjct: 1416 GSSIINFYSKVGLIEDAELVFSRMLEKDVVTWNLL------------------------- 1450
Query: 385 YSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEY 444
IS Y Q+ Q AL + H M ++ + +T+ S+ A A + +K G+ H Y
Sbjct: 1451 ------ISSYVQHHQVGKALNMCHLMRSENLRFDSVTLSSILSASAVTSNIKLGKEGHCY 1504
Query: 445 VLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDAN 504
+ ++ + ++ +IIDMYAKC I+ A +VF +R + WN ++ A G +
Sbjct: 1505 CIRRNLESDVVVANSIIDMYAKCERIDDARKVFDSTTERDLVL--WNTLLAAYAQVGLSG 1562
Query: 505 LTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCM 564
LK++ ++ ++ N I++ V+ G V+ + F M+S+ +P+L + +
Sbjct: 1563 EALKLFYQMQFDSVPPNVISWNSVILGFLRNGQVNEAKDMFSQMQSL-GFQPNLITWTTL 1621
Query: 565 VDLLGRAG 572
+ L ++G
Sbjct: 1622 ISGLAQSG 1629
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 104/431 (24%), Positives = 204/431 (47%), Gaps = 44/431 (10%)
Query: 231 FAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMI 290
+AK E+A LF R+ ++V SW ++ ++ +AL + M +G+ P++ ++
Sbjct: 1221 YAKCDFPEVAVRLFHRLRVRNVFSWAAIVGLQCRMGFSEDALLGFIEMQENGVFPDNFVL 1280
Query: 291 VDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIK 350
+++ ACG G G +H ++K GF F+ ++++ Y CG + AR F+ ++
Sbjct: 1281 PNVLKACGSLQLIGLGKGVHGYVLKMGFGACVFVSSSLVDMYGKCGVLEDARKVFDSMVE 1340
Query: 351 DHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGM 410
++ +WN++I G+++NG+ ++ A+++F+ M
Sbjct: 1341 KNVVTWNSMIVGYVQNGLNQE-------------------------------AIDVFYDM 1369
Query: 411 VDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSI 470
G++P +T+ S A A+ L EG+ H + NS+ L++ L ++II+ Y+K G I
Sbjct: 1370 RVEGIEPTRVTVASFLSASANLDALIEGKQGHAIAILNSLDLDNILGSSIINFYSKVGLI 1429
Query: 471 NTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLS 530
A VF + ++ V WN +I H L + + N++ +S+T +LS
Sbjct: 1430 EDAELVFSRMLEK--DVVTWNLLISSYVQHHQVGKALNMCHLMRSENLRFDSVTLSSILS 1487
Query: 531 TCCHAGLVDLG-ERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKAD 589
+ LG E + ++ N+E D+ ++D+ + +++DA +V S + D
Sbjct: 1488 ASAVTSNIKLGKEGHCYCIRR--NLESDVVVANSIIDMYAKCERIDDARKVFDSTTER-D 1544
Query: 590 VVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNI----YADAGRWEDAFS 645
+V+W TLLAA + V + A K +Q P V+ N + G+ +A
Sbjct: 1545 LVLWNTLLAA---YAQVGLSGEALKLFYQMQFDSVPPNVISWNSVILGFLRNGQVNEAKD 1601
Query: 646 IRKEMRDCGMK 656
+ +M+ G +
Sbjct: 1602 MFSQMQSLGFQ 1612
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/349 (23%), Positives = 154/349 (44%), Gaps = 42/349 (12%)
Query: 260 DGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAG-- 317
DG+LQ E++ + M + + +L+ C A G QIH+ I+K G
Sbjct: 1152 DGHLQ-----ESVHLLSEMEFEDFQIGPEIYGELLQGCVYERALHTGQQIHARILKNGDF 1206
Query: 318 FDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFN 377
F ++++ ++ FYA C E A +LF+
Sbjct: 1207 FAKNEYVETKLVVFYAKCD-------------------------------FPEVAVRLFH 1235
Query: 378 NMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKE 437
++ R+V+SW+A++ + AL F M + GV P+ + +V A S +
Sbjct: 1236 RLRVRNVFSWAAIVGLQCRMGFSEDALLGFIEMQENGVFPDNFVLPNVLKACGSLQLIGL 1295
Query: 438 GRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGL 497
G+ H YVL +S++++DMY KCG + A +VF + ++ +V WN++I G
Sbjct: 1296 GKGVHGYVLKMGFGACVFVSSSLVDMYGKCGVLEDARKVFDSMVEK--NVVTWNSMIVGY 1353
Query: 498 AMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPD 557
+G + ++ D+ I+ +T LS + + G++ ++ + +++ D
Sbjct: 1354 VQNGLNQEAIDVFYDMRVEGIEPTRVTVASFLSASANLDALIEGKQ-GHAIAILNSLDLD 1412
Query: 558 LKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNV 606
+++ + G +EDAE V M ++ DVV W L+++ H V
Sbjct: 1413 NILGSSIINFYSKVGLIEDAELVFSRM-LEKDVVTWNLLISSYVQHHQV 1460
>gi|224126355|ref|XP_002329533.1| predicted protein [Populus trichocarpa]
gi|222870242|gb|EEF07373.1| predicted protein [Populus trichocarpa]
Length = 693
Score = 338 bits (867), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 209/641 (32%), Positives = 335/641 (52%), Gaps = 47/641 (7%)
Query: 62 NSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCV 121
SL+ Y++ G I +++ +FD + V+ N+M+SGY++ RL++AR +F++ P + V
Sbjct: 37 TSLLTKYSRIGFIDESRVLFDIMPERNIVSYNVMLSGYLQCGRLSEARGLFEEMPERNVV 96
Query: 122 SYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLV 181
S+TSM+ G A EA E+F++M V+ +A +I + + E R V
Sbjct: 97 SWTSMLCGLADAGRICEARELFKEMPERNVVSWNAMVAGLIKNE----DLEEARR----V 148
Query: 182 IKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELAR 241
+ + V+ ++ + + EAR LF+EM++RN+++W M+ G+ + G V A
Sbjct: 149 FDEIPEKNVVSWNAMIKGFAENGKMEEARVLFEEMEDRNVITWTTMIAGYCRIGDVREAY 208
Query: 242 ELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAM-LCDGIAPNDVMIVDLISACGRA 300
F RIP ++VVSW MI G+ EAL ++ M IAPN + L AC
Sbjct: 209 CFFCRIPERNVVSWTAMISGFTWNGYYGEALLLFLEMKRRSNIAPNGETFISLAYACAGM 268
Query: 301 MAFGEGLQIHSIIVKAGFDCYDF---IQATIIHFYAACGRINLARLQFELGIKDH-IASW 356
G Q+H+ ++ G + D+ I ++IH Y+ G ++ A F + H + S
Sbjct: 269 RFHHLGKQLHAQLIINGLEYEDYDGRIAKSLIHMYSLFGAMDYAHYVFNKNLNSHAVQSC 328
Query: 357 NALIAGFIRNGMIEDARQLFN-------------------------------NMQKRDVY 385
N +I G+ R G +E AR+LF+ NM +D
Sbjct: 329 NHMINGYTRIGQVEKARELFDTIPARDNITWTSMIVGYFDIGNVSEACYLFENMPDKDSV 388
Query: 386 SWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYV 445
+W++MISG QNE A M+ G P T +F A + L GR H +
Sbjct: 389 AWTSMISGLVQNELFLKATSFLLRMLAHGAPPLSSTYAILFGAAGAIAHLDFGRQLHNML 448
Query: 446 LNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANL 505
+ + LS ++I MYAKCG I+ A+ +F ++ R + WN +I GLA H AN
Sbjct: 449 MKTLSDCDLILSNSLISMYAKCGEIHDAYSIFTNMIYR--DLISWNTMIMGLAHHALANE 506
Query: 506 TLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMV 565
TLK++ + + + NS+TF+G+LS C HAGLV G + FK+M+ VY ++P L+HY M+
Sbjct: 507 TLKVFETMLQSGTRPNSVTFLGILSACSHAGLVSQGCKLFKAMRDVYAIQPGLEHYISMI 566
Query: 566 DLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRI-HGNVEVGERAAKSLAGLQPSHG 624
+LLGRAG++ +AEE+I +P + + IWG LL + N ++ + AA+ L L P +
Sbjct: 567 NLLGRAGKVREAEELILGLPFETNHAIWGALLGVCGVAEKNADIAQHAARRLLELDPLNA 626
Query: 625 PSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGVV 665
P+ V L NIYA G+ + +RKEM G++++PG S +V
Sbjct: 627 PAHVALCNIYAACGKHIEEQKLRKEMGLKGVRKVPGCSWIV 667
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 115/442 (26%), Positives = 189/442 (42%), Gaps = 120/442 (27%)
Query: 204 SSLVEARSLFDEMKERN----IVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMI 259
L +AR+L D+ ER+ I W +L +++ G ++ +R LF+ +P +++VS+ M+
Sbjct: 12 QKLQQARNLLDKFPERSRHSRIAHWTSLLTKYSRIGFIDESRVLFDIMPERNIVSYNVML 71
Query: 260 DGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFD 319
GYLQ RLSEA ++ M + M+ CG A A
Sbjct: 72 SGYLQCGRLSEARGLFEEMPERNVVSWTSML------CGLADA----------------- 108
Query: 320 CYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNM 379
GRI AR F+ + ++ SWNA++AG I+N +E+AR++F+ +
Sbjct: 109 ----------------GRICEARELFKEMPERNVVSWNAMVAGLIKNEDLEEARRVFDEI 152
Query: 380 QKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGR 439
+++V SW+AMI G+A+N + A LF M D V TM++ +C I
Sbjct: 153 PEKNVVSWNAMIKGFAENGKMEEARVLFEEMEDRNV-ITWTTMIAGYCRI---------- 201
Query: 440 WAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAM 499
G + A+ F I +R +V W A+I G
Sbjct: 202 ----------------------------GDVREAYCFFCRIPER--NVVSWTAMISGFTW 231
Query: 500 HGDANLTLKIYSDLEKR-NIKLNSITFIGVLSTCC-----------HAGLV-------DL 540
+G L ++ ++++R NI N TFI + C HA L+ D
Sbjct: 232 NGYYGEALLLFLEMKRRSNIAPNGETFISLAYACAGMRFHHLGKQLHAQLIINGLEYEDY 291
Query: 541 GERYFKSMKSVYNV--EPDLKHY------------GC--MVDLLGRAGQLEDAEEVIRSM 584
R KS+ +Y++ D HY C M++ R GQ+E A E+ ++
Sbjct: 292 DGRIAKSLIHMYSLFGAMDYAHYVFNKNLNSHAVQSCNHMINGYTRIGQVEKARELFDTI 351
Query: 585 PMKADVVIWGTLLAASRIHGNV 606
P + D + W +++ GNV
Sbjct: 352 PAR-DNITWTSMIVGYFDIGNV 372
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 143/320 (44%), Gaps = 42/320 (13%)
Query: 49 IFKSGLESNTFIQ-NSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLND 107
+F L S+ N +IN Y + G + +A+ +FD+ D + MI GY +++
Sbjct: 315 VFNKNLNSHAVQSCNHMINGYTRIGQVEKARELFDTIPARDNITWTSMIVGYFDIGNVSE 374
Query: 108 AREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVH 167
A +F+ P K V++TSMI G QN+ + +A M G P T A + ++
Sbjct: 375 ACYLFENMPDKDSVAWTSMISGLVQNELFLKATSFLLRMLAHGAPPLSSTYAILFGAAGA 434
Query: 168 LGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVM 227
+ + R LH +++K + D +I+S +L++MY C + +A S+F M R+++SWN M
Sbjct: 435 IAHLDFGRQLHNMLMKTLSDCDLILSNSLISMYAKCGEIHDAYSIFTNMIYRDLISWNTM 494
Query: 228 LNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPND 287
+ G A L +E L ++ ML G PN
Sbjct: 495 IMGLAHHALA-------------------------------NETLKVFETMLQSGTRPNS 523
Query: 288 VMIVDLISACGRAMAFGEGLQIHSII-----VKAGFDCYDFIQATIIHFYAACGRINLA- 341
V + ++SAC A +G ++ + ++ G + Y ++I+ G++ A
Sbjct: 524 VTFLGILSACSHAGLVSQGCKLFKAMRDVYAIQPGLEHY----ISMINLLGRAGKVREAE 579
Query: 342 RLQFELGIKDHIASWNALIA 361
L L + + A W AL+
Sbjct: 580 ELILGLPFETNHAIWGALLG 599
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 107/264 (40%), Gaps = 69/264 (26%)
Query: 42 GQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIR 101
G+Q+H+++ K+ + + + NSLI++YAKCG I A S+F + D ++ N M
Sbjct: 441 GRQLHNMLMKTLSDCDLILSNSLISMYAKCGEIHDAYSIFTNMIYRDLISWNTM------ 494
Query: 102 NDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASV 161
IMG A + E L+VF M G PN VT +
Sbjct: 495 -------------------------IMGLAHHALANETLKVFETMLQSGTRPNSVTFLGI 529
Query: 162 ISSSVHLGGIWE-CRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERN 220
+S+ H G + + C++ K M D + I +
Sbjct: 530 LSACSHAGLVSQGCKLF-----KAMRDVYAI--------------------------QPG 558
Query: 221 IVSWNVMLNGFAKAGLVELARELFERIP-SKDVVSWGTMIDGYLQVERLSEALTMY---R 276
+ + M+N +AG V A EL +P + WG ++ G V + + + R
Sbjct: 559 LEHYISMINLLGRAGKVREAEELILGLPFETNHAIWGALL-GVCGVAEKNADIAQHAARR 617
Query: 277 AMLCDGI-APNDVMIVDLISACGR 299
+ D + AP V + ++ +ACG+
Sbjct: 618 LLELDPLNAPAHVALCNIYAACGK 641
>gi|357116509|ref|XP_003560023.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Brachypodium distachyon]
Length = 804
Score = 338 bits (867), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 199/635 (31%), Positives = 333/635 (52%), Gaps = 22/635 (3%)
Query: 45 IHSLIFKSGL---ESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIR 101
+H+ + + L S+ + L++LY ++ +F + PVA ++S Y
Sbjct: 44 LHARLLTAALLHDPSHPHLTLRLLHLYTLSPDLATPAVLFRA--DPGPVAATSLVSAYAV 101
Query: 102 NDRLNDAREVFDKTPI--KCCVSYTSMIMGFAQNDCWREALEVFRDMRIL--GVIPNEVT 157
RL D+ FD P+ + V + +MI FA+ A+ VFR + + P++ +
Sbjct: 102 AGRLRDSAAFFDSVPVARRDTVLHNAMISAFARASLAAPAVSVFRSLLASDDSLRPDDYS 161
Query: 158 LASVISS--SVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSS---LVEARSL 212
S++S+ +H + C LH V KL + +S L+ +Y C + +AR +
Sbjct: 162 FTSLLSAVGQMHDLAVSHCTQLHCAVHKLGAGAVLSVSNALIALYMKCDAPGVTRDARKV 221
Query: 213 FDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEAL 272
DEM E++ ++W ++ G + G V AR FE I + V W MI GY+Q +EA
Sbjct: 222 LDEMPEKDELTWTTIVVGHVRKGDVHAARSAFEEIDGEFDVVWNAMISGYVQSGMCAEAF 281
Query: 273 TMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD----FIQATI 328
++R M+ I P++ L+SAC A F G +H ++ D + +
Sbjct: 282 ELFRRMVSKRIPPDEFTFTSLLSACANAGFFLHGKSVHGQFIRLQPDFVPEAALPVNNAL 341
Query: 329 IHFYAACGRINLARLQFE-LGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSW 387
+ Y+ G+I +A F+ + +KD + SWN +++G+I +G +++A ++F M + SW
Sbjct: 342 VTLYSKSGKIAVATKIFDSMTLKD-VVSWNTILSGYIESGCLDNAARIFKEMPYKSELSW 400
Query: 388 SAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLN 447
M+SGY AL+LF+ M VKP + T A G LK G+ H +++
Sbjct: 401 MVMVSGYVHGGLAEDALKLFNQMRSEDVKPCDYTYAGAVAACGELGALKHGKQLHAHLVQ 460
Query: 448 NSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTL 507
+++ A++ MYA+CG++ A VF + SVS WNA+I L HG L
Sbjct: 461 CGFEASNSAGNALLTMYARCGAVKDARLVFL-VMPNVDSVS-WNAMISALGQHGHGREAL 518
Query: 508 KIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDL 567
+++ + + I + I+F+ +L+ C HAGLVD G +YF+SM+ + + P HY ++DL
Sbjct: 519 ELFDQMVAQGIYPDRISFLTILTACNHAGLVDDGFQYFESMERDFGISPGEDHYARLIDL 578
Query: 568 LGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSR 627
LGRAG++ +A ++I++MP + IW +L+ RI+G++E+G AA L + P H +
Sbjct: 579 LGRAGRIGEARDLIKTMPFEPTPAIWEAILSGCRINGDMELGAYAADQLFKMVPEHDGTY 638
Query: 628 VLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
+LLSN Y+ AGRW DA +RK MRD G+K+ PG S
Sbjct: 639 ILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCS 673
Score = 194 bits (494), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 135/512 (26%), Positives = 244/512 (47%), Gaps = 49/512 (9%)
Query: 8 SVFNSQKAN---LQNSDYEL-ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNS 63
SVF S A+ L+ DY +L+SA+ +AVS Q+H + K G + + N+
Sbjct: 143 SVFRSLLASDDSLRPDDYSFTSLLSAVGQMH-DLAVSHCTQLHCAVHKLGAGAVLSVSNA 201
Query: 64 LINLYAKC---GLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCC 120
LI LY KC G+ A+ + D D + ++ G++R ++ AR F++ +
Sbjct: 202 LIALYMKCDAPGVTRDARKVLDEMPEKDELTWTTIVVGHVRKGDVHAARSAFEEIDGEFD 261
Query: 121 VSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGL 180
V + +MI G+ Q+ EA E+FR M + P+E T S++S+ + G + +HG
Sbjct: 262 VVWNAMISGYVQSGMCAEAFELFRRMVSKRIPPDEFTFTSLLSACANAGFFLHGKSVHGQ 321
Query: 181 VIKLMID----GFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGL 236
I+L D + ++ L+ +Y + A +FD M +++VSWN +L+G+ ++G
Sbjct: 322 FIRLQPDFVPEAALPVNNALVTLYSKSGKIAVATKIFDSMTLKDVVSWNTILSGYIESGC 381
Query: 237 VELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISA 296
++ A +F+ +P K +SW M+ GY+ +AL ++ M + + P D ++A
Sbjct: 382 LDNAARIFKEMPYKSELSWMVMVSGYVHGGLAEDALKLFNQMRSEDVKPCDYTYAGAVAA 441
Query: 297 CGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASW 356
CG A G Q+H+ +V+ GF+ + ++ YA CG + ARL F + SW
Sbjct: 442 CGELGALKHGKQLHAHLVQCGFEASNSAGNALLTMYARCGAVKDARLVFLVMPNVDSVSW 501
Query: 357 NALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVK 416
NA+I+ ++G +A +LF+ MV G+
Sbjct: 502 NAMISALGQHGHGREALELFDQ-------------------------------MVAQGIY 530
Query: 417 PNEITMVSVFCAIASSGTLKEGRWAHEYVLNN-SITLNDNLSAAIIDMYAKCGSINTAFE 475
P+ I+ +++ A +G + +G E + + I+ ++ A +ID+ + G I A +
Sbjct: 531 PDRISFLTILTACNHAGLVDDGFQYFESMERDFGISPGEDHYARLIDLLGRAGRIGEARD 590
Query: 476 VFYHIRDRTTSVSP--WNAIICGLAMHGDANL 505
+ I+ +P W AI+ G ++GD L
Sbjct: 591 L---IKTMPFEPTPAIWEAILSGCRINGDMEL 619
>gi|297723179|ref|NP_001173953.1| Os04g0436350 [Oryza sativa Japonica Group]
gi|21740490|emb|CAD40814.1| OSJNBa0006B20.5 [Oryza sativa Japonica Group]
gi|125590470|gb|EAZ30820.1| hypothetical protein OsJ_14890 [Oryza sativa Japonica Group]
gi|218194889|gb|EEC77316.1| hypothetical protein OsI_15981 [Oryza sativa Indica Group]
gi|255675491|dbj|BAH92681.1| Os04g0436350 [Oryza sativa Japonica Group]
Length = 685
Score = 338 bits (866), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 203/618 (32%), Positives = 318/618 (51%), Gaps = 40/618 (6%)
Query: 52 SGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREV 111
S TF+ N+L++ YA+ G + A+ +FD + + N ++S R R +DA +
Sbjct: 44 SPFAGETFLLNTLLSAYARLGSLHDARRVFDGMPHRNTFSYNALLSACARLGRADDALAL 103
Query: 112 FDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGI 171
F P SY +++ AQ+ +AL M + N + AS +S+
Sbjct: 104 FGAIPDPDQCSYNAVVAALAQHGRGGDALRFLAAMHADDFVLNAYSFASALSACASEKAS 163
Query: 172 WECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGF 231
+H LV K V I T L++MY C EA+ +FD M ERNIVSWN ++ +
Sbjct: 164 RTGEQVHALVTKSSHGSDVYIGTALVDMYAKCERPEEAQKVFDAMPERNIVSWNSLITCY 223
Query: 232 AKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIV 291
+ G V+ EAL ++ M+ DG P++V +
Sbjct: 224 EQNGPVD-------------------------------EALALFVRMMKDGFVPDEVTLA 252
Query: 292 DLISACGRAMAFGEGLQIHSIIVKAGFDCYDFI-QATIIHFYAACGRINLARLQFELGIK 350
++SAC A EG Q+H+ +VK+ D + ++ YA CGR A+ F+
Sbjct: 253 SVMSACAGLAAGREGRQVHTRMVKSDRFREDMVLNNALVDMYAKCGRTWEAKCVFDRMAI 312
Query: 351 DHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGM 410
+ S ++I G+ ++ + DA+ +F M +++V +W+ +I+ YA N + AL LF +
Sbjct: 313 RSVVSETSMITGYAKSANVGDAQAVFLQMVEKNVVAWNVLIATYAHNSEEEEALRLFVRL 372
Query: 411 VDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSA------AIIDMY 464
V P T +V A A+ L+ G+ AH +VL + + +++DMY
Sbjct: 373 KRESVWPTHYTYGNVLNACANLANLQLGQQAHVHVLKEGFRFDSGPESDVFVGNSLVDMY 432
Query: 465 AKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSIT 524
K GSI+ +VF + R +VS WNA+I G A +G A L ++ + N + +S+T
Sbjct: 433 LKTGSISDGAKVFERMAAR-DNVS-WNAMIVGYAQNGRAKDALLLFERMLCSNERPDSVT 490
Query: 525 FIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSM 584
IGVLS C H+GLV G RYF+SM + + P HY CM+DLLGRAG L++ EE+I +M
Sbjct: 491 MIGVLSACGHSGLVKEGRRYFQSMTEDHGIIPTRDHYTCMIDLLGRAGHLKEVEELIENM 550
Query: 585 PMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAF 644
PM+ D V+W +LL A R+H N+++GE AA L L P + VLLSN+YA+ G+W D F
Sbjct: 551 PMEPDAVLWASLLGACRLHKNIDMGEWAAGKLFELDPDNSGPYVLLSNMYAELGKWADVF 610
Query: 645 SIRKEMRDCGMKRLPGFS 662
+R+ M+ G+ + PG S
Sbjct: 611 RVRRSMKHRGVSKQPGCS 628
Score = 190 bits (482), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 130/485 (26%), Positives = 232/485 (47%), Gaps = 63/485 (12%)
Query: 25 ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSC 84
+ SAL C++ A G+Q+H+L+ KS S+ +I +L+++YAKC +A+ +FD+
Sbjct: 149 SFASALSACASEKASRTGEQVHALVTKSSHGSDVYIGTALVDMYAKCERPEEAQKVFDAM 208
Query: 85 STLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFR 144
+ V+ N +I+ Y +N ++ EAL +F
Sbjct: 209 PERNIVSWNSLITCYEQNGPVD-------------------------------EALALFV 237
Query: 145 DMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGF---VIISTNLLNMYC 201
M G +P+EVTLASV+S+ L E R +H ++K D F ++++ L++MY
Sbjct: 238 RMMKDGFVPDEVTLASVMSACAGLAAGREGRQVHTRMVK--SDRFREDMVLNNALVDMYA 295
Query: 202 VCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDG 261
C EA+ +FD M R++VS M+ G+AK+ V A+ +F ++ K+VV+W +I
Sbjct: 296 KCGRTWEAKCVFDRMAIRSVVSETSMITGYAKSANVGDAQAVFLQMVEKNVVAWNVLIAT 355
Query: 262 YLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCY 321
Y EAL ++ + + + P ++++AC G Q H ++K GF
Sbjct: 356 YAHNSEEEEALRLFVRLKRESVWPTHYTYGNVLNACANLANLQLGQQAHVHVLKEGF--- 412
Query: 322 DFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQK 381
+F+ G + + N+L+ +++ G I D ++F M
Sbjct: 413 ----------------------RFDSGPESDVFVGNSLVDMYLKTGSISDGAKVFERMAA 450
Query: 382 RDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG-RW 440
RD SW+AMI GYAQN + AL LF M+ + +P+ +TM+ V A SG +KEG R+
Sbjct: 451 RDNVSWNAMIVGYAQNGRAKDALLLFERMLCSNERPDSVTMIGVLSACGHSGLVKEGRRY 510
Query: 441 AHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMH 500
++ I + +ID+ + G + E+ ++ +V W +++ +H
Sbjct: 511 FQSMTEDHGIIPTRDHYTCMIDLLGRAGHLKEVEELIENMPMEPDAVL-WASLLGACRLH 569
Query: 501 GDANL 505
+ ++
Sbjct: 570 KNIDM 574
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 140/294 (47%), Gaps = 44/294 (14%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSG-LESNTFIQNSLINLYAKCGLISQAKSMF 81
E+ L S + C+ A +G+Q+H+ + KS + + N+L+++YAKCG +AK +F
Sbjct: 248 EVTLASVMSACAGLAAGREGRQVHTRMVKSDRFREDMVLNNALVDMYAKCGRTWEAKCVF 307
Query: 82 DSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALE 141
D + V+ MI+GY ++ + DA+ VF + K V++ +I +A N EAL
Sbjct: 308 DRMAIRSVVSETSMITGYAKSANVGDAQAVFLQMVEKNVVAWNVLIATYAHNSEEEEALR 367
Query: 142 VFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGF---------VII 192
+F ++ V P T +V+++ +L + + H V+K +GF V +
Sbjct: 368 LFVRLKRESVWPTHYTYGNVLNACANLANLQLGQQAHVHVLK---EGFRFDSGPESDVFV 424
Query: 193 STNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDV 252
+L++MY S+ + +F+ M R+ VSWN M+ G+A+ G
Sbjct: 425 GNSLVDMYLKTGSISDGAKVFERMAARDNVSWNAMIVGYAQNG----------------- 467
Query: 253 VSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEG 306
R +AL ++ MLC P+ V ++ ++SACG + EG
Sbjct: 468 --------------RAKDALLLFERMLCSNERPDSVTMIGVLSACGHSGLVKEG 507
>gi|147866113|emb|CAN78822.1| hypothetical protein VITISV_006669 [Vitis vinifera]
Length = 599
Score = 338 bits (866), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 189/544 (34%), Positives = 288/544 (52%), Gaps = 49/544 (9%)
Query: 122 SYTSMIMGFAQNDCWREALEVF-RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGL 180
S+ I GF ++ REA+ ++ R ++ G P+ T + + L I + G
Sbjct: 45 SWNVAIRGFLDSENPREAVVLYKRVLQCDGTKPDNYTYPLLFKACARLSLIRMGSEILGH 104
Query: 181 VIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELA 240
V+ L D + +S ++++ C L + A
Sbjct: 105 VLHLGFDSDIFVSNAVIHLLVSCGDL-------------------------------DGA 133
Query: 241 RELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRA 300
R++F++ +D+VSW +MI+GY++ EAL YR M +GI P++V ++ ++S+C +
Sbjct: 134 RKMFDKSCVRDLVSWNSMINGYVRRGWAYEALNFYREMKVEGIKPDEVTMIGVVSSCAQL 193
Query: 301 MAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALI 360
G + H I + G + ++ Y CG + AR F+ + SW +
Sbjct: 194 EDLDLGRESHCYIEENGLKLTVPLANALMDMYMKCGNLESARKLFDSMTNKTMVSWTTM- 252
Query: 361 AGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEI 420
LF+ M +DV W+AMI GY + AL LF+ M + P+E+
Sbjct: 253 --------------LFDEMPDKDVVPWNAMIGGYVHANRGKEALALFNEMQAMNINPDEV 298
Query: 421 TMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHI 480
TMVS A + G L G W H Y+ + ++LN L A+IDMYAKCG I A +VF +
Sbjct: 299 TMVSCLSACSQLGALDVGIWIHHYIEKHELSLNVALGTALIDMYAKCGKITKAIQVFQEL 358
Query: 481 RDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDL 540
R + W AII GLA+HG+A+ + +S++ ++ + +TF+G+LS CCH GLV+
Sbjct: 359 PGRNSLT--WTAIISGLALHGNAHGAIAYFSEMIDNSVMPDEVTFLGLLSACCHGGLVEE 416
Query: 541 GERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAAS 600
G +YF M S +N+ P LKHY CMVDLLGRAG LE+AEE+I+SMP++AD V+WG L A
Sbjct: 417 GRKYFSQMSSKFNLSPKLKHYSCMVDLLGRAGLLEEAEELIKSMPIEADAVVWGALFFAC 476
Query: 601 RIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPG 660
RIHGNV +GERAA L + P VLL+N+Y +A W++A RK MR G+++ PG
Sbjct: 477 RIHGNVLMGERAASKLLQMDPHDSGIYVLLANMYGEAEMWKEAGKXRKLMRQRGVEKTPG 536
Query: 661 FSGV 664
S +
Sbjct: 537 CSSI 540
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 127/486 (26%), Positives = 215/486 (44%), Gaps = 81/486 (16%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
+ C+ + G +I + G +S+ F+ N++I+L CG
Sbjct: 86 FKACARLSLIRMGSEILGHVLHLGFDSDIFVSNAVIHLLVSCG----------------- 128
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
L+ AR++FDK+ ++ VS+ SMI G+ + EAL +R+M++
Sbjct: 129 --------------DLDGARKMFDKSCVRDLVSWNSMINGYVRRGWAYEALNFYREMKVE 174
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
G+ P+EVT+ V+SS L + R H + + + V ++ L++MY C +L A
Sbjct: 175 GIKPDEVTMIGVVSSCAQLEDLDLGRESHCYIEENGLKLTVPLANALMDMYMKCGNLESA 234
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLS 269
R LFD M + +VSW ML F+ +P KDVV W MI GY+ R
Sbjct: 235 RKLFDSMTNKTMVSWTTML---------------FDEMPDKDVVPWNAMIGGYVHANRGK 279
Query: 270 EALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATII 329
EAL ++ M I P++V +V +SAC + A G+ IH I K + +I
Sbjct: 280 EALALFNEMQAMNINPDEVTMVSCLSACSQLGALDVGIWIHHYIEKHELSLNVALGTALI 339
Query: 330 HFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSA 389
YA CG+I A Q+F + R+ +W+A
Sbjct: 340 DMYAKCGKIT-------------------------------KAIQVFQELPGRNSLTWTA 368
Query: 390 MISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNS 449
+ISG A + + A+ F M+D V P+E+T + + A G ++EGR + +++
Sbjct: 369 IISGLALHGNAHGAIAYFSEMIDNSVMPDEVTFLGLLSACCHGGLVEEGR-KYFSQMSSK 427
Query: 450 ITLNDNLS--AAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTL 507
L+ L + ++D+ + G + A E+ + +V W A+ +HG+ +
Sbjct: 428 FNLSPKLKHYSCMVDLLGRAGLLEEAEELIKSMPIEADAVV-WGALFFACRIHGNVLMGE 486
Query: 508 KIYSDL 513
+ S L
Sbjct: 487 RAASKL 492
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/374 (21%), Positives = 161/374 (43%), Gaps = 85/374 (22%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E+ ++ + C+ + G++ H I ++GL+ + N+L+++Y KCG + A+ +FD
Sbjct: 180 EVTMIGVVSSCAQLEDLDLGRESHCYIEENGLKLTVPLANALMDMYMKCGNLESARKLFD 239
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
S + V+ M+ FD+ P K V + +MI G+ + +EAL +
Sbjct: 240 SMTNKTMVSWTTML---------------FDEMPDKDVVPWNAMIGGYVHANRGKEALAL 284
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLG----GIWECRMLHGLVIKLMIDGFVIISTNLLN 198
F +M+ + + P+EVT+ S +S+ LG GIW +H + K + V + T L++
Sbjct: 285 FNEMQAMNINPDEVTMVSCLSACSQLGALDVGIW----IHHYIEKHELSLNVALGTALID 340
Query: 199 MYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTM 258
MY C + +A +F E+ RN ++W +++G A G
Sbjct: 341 MYAKCGKITKAIQVFQELPGRNSLTWTAIISGLALHG----------------------- 377
Query: 259 IDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGF 318
A+ + M+ + + P++V + L+SAC H +V+
Sbjct: 378 --------NAHGAIAYFSEMIDNSVMPDEVTFLGLLSAC-----------CHGGLVEE-- 416
Query: 319 DCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNN 378
GR +++ + + + ++ ++ R G++E+A +L +
Sbjct: 417 -----------------GRKYFSQMSSKFNLSPKLKHYSCMVDLLGRAGLLEEAEELIKS 459
Query: 379 MQ-KRDVYSWSAMI 391
M + D W A+
Sbjct: 460 MPIEADAVVWGALF 473
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 107/227 (47%), Gaps = 17/227 (7%)
Query: 378 NMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDA-GVKPNEITMVSVFCAIASSGTLK 436
N + + +SW+ I G+ +E P A+ L+ ++ G KP+ T +F A A ++
Sbjct: 37 NTRNPNTFSWNVAIRGFLDSENPREAVVLYKRVLQCDGTKPDNYTYPLLFKACARLSLIR 96
Query: 437 EGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYH--IRDRTTSVSPWNAII 494
G +VL+ + +S A+I + CG ++ A ++F +RD + WN++I
Sbjct: 97 MGSEILGHVLHLGFDSDIFVSNAVIHLLVSCGDLDGARKMFDKSCVRDLVS----WNSMI 152
Query: 495 CGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNV 554
G G A L Y +++ IK + +T IGV+S+C +DLG Y
Sbjct: 153 NGYVRRGWAYEALNFYREMKVEGIKPDEVTMIGVVSSCAQLEDLDLGRE-----SHCYIE 207
Query: 555 EPDLKHY----GCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLL 597
E LK ++D+ + G LE A ++ SM K +V W T+L
Sbjct: 208 ENGLKLTVPLANALMDMYMKCGNLESARKLFDSMTNKT-MVSWTTML 253
>gi|357480925|ref|XP_003610748.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512083|gb|AES93706.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 828
Score = 338 bits (866), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 195/635 (30%), Positives = 322/635 (50%), Gaps = 64/635 (10%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
L CS +A S+G Q+H ++ K GL + F+ NSLI+ YA CG
Sbjct: 129 LSACSKIMAFSEGVQVHGVVVKMGLVKDLFVANSLIHFYAACG----------------- 171
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
+++ R+VFD+ + VS+TS+I G++ + +EA+ +F +M +
Sbjct: 172 --------------KVDLGRKVFDEMLERNVVSWTSLINGYSVVNMAKEAVCLFFEMVEV 217
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
GV PN VT+ IS+ L + + + L+ +L + ++ LL+MY C +
Sbjct: 218 GVEPNPVTMVCAISACAKLKDLELGKKVCNLMTELGVKSNTLVVNALLDMYMKCGDMYAV 277
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLS 269
R E+F+ K++V + T++ Y+Q
Sbjct: 278 R-------------------------------EIFDEFSDKNLVMYNTIMSNYVQHGLAG 306
Query: 270 EALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATII 329
E L + ML G P+ V ++ I+AC + G H+ + + G + D I II
Sbjct: 307 EVLVVLDEMLQKGQRPDKVTMLSTIAACAQLGDLSVGKSSHAYVFRNGLERLDNISNAII 366
Query: 330 HFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSA 389
Y CG+ A F+ + +WN+LIAG +R+G +E A ++F M + ++ SW+
Sbjct: 367 DMYMKCGKREAACKVFDSMSNKTVVTWNSLIAGLVRDGELELALRIFGEMPESNLVSWNT 426
Query: 390 MISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNS 449
MI Q A++L M + G+K + +TMV + A G L +W + Y+ N
Sbjct: 427 MIGAMVQASMFEEAIDLLREMQNQGIKGDRVTMVGIASACGYLGALDLAKWIYTYIEKND 486
Query: 450 ITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKI 509
I ++ L A++DM+++CG A VF ++ R VS W A I A+ G+A +++
Sbjct: 487 IHIDMQLGTALVDMFSRCGDPLNAMRVFENMEKR--DVSAWTAAIRVKAVEGNAKGAIEL 544
Query: 510 YSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLG 569
+ ++ K+++K + F+ +L+ H G VD G + F +M+ ++ V P + HYGCMVDLLG
Sbjct: 545 FDEMLKQDVKADDFVFVALLTAFSHGGYVDQGRQLFWAMEKIHGVSPQIVHYGCMVDLLG 604
Query: 570 RAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVL 629
RAG LE+A ++++SMP+K + VIWG+ LAA R H NVE A + + L P VL
Sbjct: 605 RAGLLEEAFDLMKSMPIKPNDVIWGSFLAACRKHKNVEFANYADEKITQLAPEKVGIHVL 664
Query: 630 LSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
LSNIYA AG+W D +R +M++ G +++ G S +
Sbjct: 665 LSNIYASAGKWNDVARVRLQMKEKGFQKVAGSSSI 699
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 126/492 (25%), Positives = 222/492 (45%), Gaps = 70/492 (14%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+ +V A+ C+ + G+++ +L+ + G++SNT + N+L+++Y KCG + + +FD
Sbjct: 224 VTMVCAISACAKLKDLELGKKVCNLMTELGVKSNTLVVNALLDMYMKCGDMYAVREIFDE 283
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
S + V N ++S Y+++ G A E L V
Sbjct: 284 FSDKNLVMYNTIMSNYVQH--------------------------GLAG-----EVLVVL 312
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
+M G P++VT+ S I++ LG + + H V + ++ IS +++MY C
Sbjct: 313 DEMLQKGQRPDKVTMLSTIAACAQLGDLSVGKSSHAYVFRNGLERLDNISNAIIDMYMKC 372
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYL 263
A +FD M + +V+WN ++ G + G +ELA +F +P ++VSW TMI +
Sbjct: 373 GKREAACKVFDSMSNKTVVTWNSLIAGLVRDGELELALRIFGEMPESNLVSWNTMIGAMV 432
Query: 264 QVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDF 323
Q EA+ + R M GI + V +V + SACG A I Y +
Sbjct: 433 QASMFEEAIDLLREMQNQGIKGDRVTMVGIASACGYLGALDLAKWI-----------YTY 481
Query: 324 IQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRD 383
I+ IH + +LG AL+ F R G +A ++F NM+KRD
Sbjct: 482 IEKNDIH------------IDMQLG--------TALVDMFSRCGDPLNAMRVFENMEKRD 521
Query: 384 VYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGR---W 440
V +W+A I A A+ELF M+ VK ++ V++ A + G + +GR W
Sbjct: 522 VSAWTAAIRVKAVEGNAKGAIELFDEMLKQDVKADDFVFVALLTAFSHGGYVDQGRQLFW 581
Query: 441 AHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMH 500
A E + + ++ ++D+ + G + AF++ + + V W + + H
Sbjct: 582 AMEKI--HGVSPQIVHYGCMVDLLGRAGLLEEAFDLMKSMPIKPNDV-IWGSFLAACRKH 638
Query: 501 GDANLTLKIYSD 512
N+ Y+D
Sbjct: 639 --KNVEFANYAD 648
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 152/317 (47%), Gaps = 43/317 (13%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
++ ++S + C+ +S G+ H+ +F++GLE I N++I++Y KCG A +FD
Sbjct: 324 KVTMLSTIAACAQLGDLSVGKSSHAYVFRNGLERLDNISNAIIDMYMKCGKREAACKVFD 383
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
S S V N +I+G +R+ L A +F + P VS+ +MI Q + EA+++
Sbjct: 384 SMSNKTVVTWNSLIAGLVRDGELELALRIFGEMPESNLVSWNTMIGAMVQASMFEEAIDL 443
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
R+M+ G+ + VT+ + S+ +LG + + ++ + K I + + T L++M+
Sbjct: 444 LREMQNQGIKGDRVTMVGIASACGYLGALDLAKWIYTYIEKNDIHIDMQLGTALVDMFSR 503
Query: 203 CSSLVEARSLFDEMKERNIVSWN-----------------------------------VM 227
C + A +F+ M++R++ +W +
Sbjct: 504 CGDPLNAMRVFENMEKRDVSAWTAAIRVKAVEGNAKGAIELFDEMLKQDVKADDFVFVAL 563
Query: 228 LNGFAKAGLVELARELF---ERIP--SKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDG 282
L F+ G V+ R+LF E+I S +V +G M+D + L EA + ++M
Sbjct: 564 LTAFSHGGYVDQGRQLFWAMEKIHGVSPQIVHYGCMVDLLGRAGLLEEAFDLMKSM---P 620
Query: 283 IAPNDVMIVDLISACGR 299
I PNDV+ ++AC +
Sbjct: 621 IKPNDVIWGSFLAACRK 637
>gi|147819809|emb|CAN60740.1| hypothetical protein VITISV_030210 [Vitis vinifera]
Length = 1033
Score = 337 bits (865), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 192/516 (37%), Positives = 293/516 (56%), Gaps = 43/516 (8%)
Query: 192 ISTN-LLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGF-------AKAGLVELAREL 243
ISTN ++++ C SL E R + +M + N+++ ++ +G ++ A +
Sbjct: 4 ISTNPVVSVLDKCKSLCELRQIHAQMIKTNLLNHQFTVSRLIAFCSLSGVSGGLDYASSV 63
Query: 244 FERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAML-CDGIAPN-DVMIVDLISACGRAM 301
F RI + + +I G+ E+L +Y ML C + + I ++ ACG+ +
Sbjct: 64 FSRIQHPNSFIFFALIKGFSDTSNPVESLILYARMLSCLNYSSGVEFSIPSVLKACGKLL 123
Query: 302 AFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIA 361
AF EG Q+H ++K F+ +++ Y G I LAR F+ + SWN++IA
Sbjct: 124 AFDEGRQVHGQVLKTHLWFDPFVGNSMVRMYIDFGEIELARRVFDRMPNRDVVSWNSMIA 183
Query: 362 GFIRNGMIEDARQLFNNMQKRD-------------------------------VYSWSAM 390
G+++ G IE A +LF+ M +RD V +W++M
Sbjct: 184 GYLKAGEIELASELFDEMPERDLVSCNAMIDGYGKCGRCELAEKVFETMSDKDVVTWTSM 243
Query: 391 ISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSI 450
IS Y QN P AL+LF M+ G++P+ +VSV AIA G ++EG+W H YV N I
Sbjct: 244 ISAYVQNRCPMKALDLFREMLSLGLRPDGPAIVSVLSAIADLGFVEEGKWLHAYVSMNKI 303
Query: 451 TLNDN-LSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKI 509
L+ + +A+IDMY+KCG I A+ VF I R ++ WN++I GLA+HG A L I
Sbjct: 304 ELSSGFIGSALIDMYSKCGYIENAYHVFRSISHRR-NIGDWNSMISGLAIHGLAREALDI 362
Query: 510 YSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLG 569
+ ++E+ +I+ N ITF+G+LSTC H GLV+ G+ YF+SM Y + P ++HYGCM+DL G
Sbjct: 363 FVEMERMDIEPNEITFLGLLSTCSHGGLVEEGQFYFESMHEKYKIVPRIQHYGCMIDLFG 422
Query: 570 RAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVL 629
RAG+LEDA VI++MP +AD++ W +L+AS HG++E+G+ AA L P S VL
Sbjct: 423 RAGRLEDALGVIQNMPFEADLLAWKAILSASMKHGHIEIGKSAALRAIELAPDDSSSYVL 482
Query: 630 LSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGVV 665
LSNIYA AGRW+D IR MR G+K++ G S ++
Sbjct: 483 LSNIYAKAGRWDDVAKIRLMMRQRGVKKIAGCSSML 518
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 105/391 (26%), Positives = 180/391 (46%), Gaps = 74/391 (18%)
Query: 19 NSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAK 78
+S E ++ S L+ C +A +G+Q+H + K+ L + F+ NS++ +Y G I A+
Sbjct: 105 SSGVEFSIPSVLKACGKLLAFDEGRQVHGQVLKTHLWFDPFVGNSMVRMYIDFGEIELAR 164
Query: 79 SMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTP----IKC--------------- 119
+FD D V+ N MI+GY++ + A E+FD+ P + C
Sbjct: 165 RVFDRMPNRDVVSWNSMIAGYLKAGEIELASELFDEMPERDLVSCNAMIDGYGKCGRCEL 224
Query: 120 ------------CVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVH 167
V++TSMI + QN C +AL++FR+M LG+ P+ + SV+S+
Sbjct: 225 AEKVFETMSDKDVVTWTSMISAYVQNRCPMKALDLFREMLSLGLRPDGPAIVSVLSAIAD 284
Query: 168 LGGIWECRMLHGLVIKLMID---GFVIISTNLLNMYCVCSSLVEARSLFDEMK-ERNIVS 223
LG + E + LH V I+ GF I + L++MY C + A +F + RNI
Sbjct: 285 LGFVEEGKWLHAYVSMNKIELSSGF--IGSALIDMYSKCGYIENAYHVFRSISHRRNIGD 342
Query: 224 WNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGI 283
WN M++G A G LARE +D ++++ER+ I
Sbjct: 343 WNSMISGLAIHG---LARE---------------ALDIFVEMERMD-------------I 371
Query: 284 APNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQ--ATIIHFYAACGRIN-- 339
PN++ + L+S C EG Q + + + IQ +I + GR+
Sbjct: 372 EPNEITFLGLLSTCSHGGLVEEG-QFYFESMHEKYKIVPRIQHYGCMIDLFGRAGRLEDA 430
Query: 340 LARLQFELGIKDHIASWNALIAGFIRNGMIE 370
L +Q + + + +W A+++ +++G IE
Sbjct: 431 LGVIQ-NMPFEADLLAWKAILSASMKHGHIE 460
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 123/514 (23%), Positives = 215/514 (41%), Gaps = 101/514 (19%)
Query: 25 ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLI---NLYAKCGLISQAKSMF 81
+VS L C + + + +QIH+ + K+ L ++ F + LI +L G + A S+F
Sbjct: 8 PVVSVLDKCKS---LCELRQIHAQMIKTNLLNHQFTVSRLIAFCSLSGVSGGLDYASSVF 64
Query: 82 DSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALE 141
+ +I G+ +D N + + C++Y+S +
Sbjct: 65 SRIQHPNSFIFFALIKGF--SDTSNPVESLILYARMLSCLNYSSGV-------------- 108
Query: 142 VFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIK--LMIDGFV--------- 190
E ++ SV+ + L E R +HG V+K L D FV
Sbjct: 109 -------------EFSIPSVLKACGKLLAFDEGRQVHGQVLKTHLWFDPFVGNSMVRMYI 155
Query: 191 -------------------IISTN-LLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNG 230
++S N ++ Y + A LFDEM ER++VS N M++G
Sbjct: 156 DFGEIELARRVFDRMPNRDVVSWNSMIAGYLKAGEIELASELFDEMPERDLVSCNAMIDG 215
Query: 231 FAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMI 290
+ K G ELA ++FE + KDVV+W +MI Y+Q +AL ++R ML G+ P+ I
Sbjct: 216 YGKCGRCELAEKVFETMSDKDVVTWTSMISAYVQNRCPMKALDLFREMLSLGLRPDGPAI 275
Query: 291 VDLISACGRAMAFGEGLQIHSIIVKAGFDCYD-FIQATIIHFYAACGRINLARLQFE-LG 348
V ++SA EG +H+ + + FI + +I Y+ CG I A F +
Sbjct: 276 VSVLSAIADLGFVEEGKWLHAYVSMNKIELSSGFIGSALIDMYSKCGYIENAYHVFRSIS 335
Query: 349 IKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFH 408
+ +I WN++I+G +G+ +A +F M++ D
Sbjct: 336 HRRNIGDWNSMISGLAIHGLAREALDIFVEMERMD------------------------- 370
Query: 409 GMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNN-SITLNDNLSAAIIDMYAKC 467
++PNEIT + + + G ++EG++ E + I +ID++ +
Sbjct: 371 ------IEPNEITFLGLLSTCSHGGLVEEGQFYFESMHEKYKIVPRIQHYGCMIDLFGRA 424
Query: 468 GSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHG 501
G + A V ++ ++ W AI+ HG
Sbjct: 425 GRLEDALGVIQNMPFEADLLA-WKAILSASMKHG 457
>gi|115487922|ref|NP_001066448.1| Os12g0233200 [Oryza sativa Japonica Group]
gi|77553539|gb|ABA96335.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113648955|dbj|BAF29467.1| Os12g0233200 [Oryza sativa Japonica Group]
Length = 704
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 181/477 (37%), Positives = 273/477 (57%), Gaps = 35/477 (7%)
Query: 190 VIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPS 249
V++ L++ Y SL +A +FDEM ER++VSW +++G+A+AGL + A LF R+
Sbjct: 178 VLVGNALVHFYANHKSLDDAGKVFDEMPERDVVSWTTLVDGYARAGLADEAWRLFCRM-- 235
Query: 250 KDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQI 309
++ G+ PN V +V +SA G+ G+ +
Sbjct: 236 ----------------------------VVVGGMRPNAVTLVAAVSAIGQMGLLAFGIML 267
Query: 310 HSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFE-LGIKDHIASWNALIAGFIRNGM 368
H + + G + ++ + CG + AR F+ + +KD + SW +++ + + G
Sbjct: 268 HKYVTEGGVARSVNLDNALVDMFGKCGCVRYAREVFDGMEVKD-VYSWTSMVNAYAKCGD 326
Query: 369 IEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCA 428
+E A QLF +M +R+V SWS MI+ Y+Q QP A+ LF M+ AGV P + T+VSV A
Sbjct: 327 LESAEQLFKDMPRRNVVSWSCMIAAYSQLNQPEEAVWLFREMIAAGVDPIDATLVSVLSA 386
Query: 429 IASSGTLKEGRWAHE-YVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSV 487
A G L GRW +E Y+++N I L NL A+IDM+AKCG + A ++F + +R +V
Sbjct: 387 CAQLGCLDLGRWIYENYIVSNKIGLTVNLGNALIDMFAKCGDVGEASKLFDEMAER--NV 444
Query: 488 SPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKS 547
WN +I A+HG + ++++ L+ NI + ITF+G+L++C H+GLV G RYFK
Sbjct: 445 VSWNTMIMAHAVHGQSEEAIRLFEQLKGENIVPDQITFLGLLASCSHSGLVSEGRRYFKE 504
Query: 548 MKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVE 607
M+ Y +EP ++HY CM+DLLG+ G LE+A EV R MPM+AD WG LL A R+HGNVE
Sbjct: 505 MEMFYRIEPRVEHYACMIDLLGKVGLLEEAFEVARGMPMEADEAGWGALLNACRMHGNVE 564
Query: 608 VGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
+G A L L PS VL+S IYA +W+ +R MRD G+K+ PG S +
Sbjct: 565 IGACVADKLVELDPSDSGIYVLMSQIYASKNKWDQVKMLRMTMRDRGVKKNPGCSSI 621
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 124/415 (29%), Positives = 208/415 (50%), Gaps = 33/415 (7%)
Query: 93 NIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVI 152
N ++ Y + L+DA +VFD+ P + VS+T+++ G+A+ EA +F M ++G +
Sbjct: 182 NALVHFYANHKSLDDAGKVFDEMPERDVVSWTTLVDGYARAGLADEAWRLFCRMVVVGGM 241
Query: 153 -PNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARS 211
PN VTL + +S+ +G + MLH V + + V + L++M+ C + AR
Sbjct: 242 RPNAVTLVAAVSAIGQMGLLAFGIMLHKYVTEGGVARSVNLDNALVDMFGKCGCVRYARE 301
Query: 212 LFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEA 271
+FD M+ +++ SW M+N +AK G +E A +LF+ +P ++VVSW MI Y Q+ + EA
Sbjct: 302 VFDGMEVKDVYSWTSMVNAYAKCGDLESAEQLFKDMPRRNVVSWSCMIAAYSQLNQPEEA 361
Query: 272 LTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHF 331
+ ++R M+ G+ P D +V ++SAC A C D + I
Sbjct: 362 VWLFREMIAAGVDPIDATLVSVLSAC------------------AQLGCLD-LGRWIYEN 402
Query: 332 YAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMI 391
Y +I L LG NALI F + G + +A +LF+ M +R+V SW+ MI
Sbjct: 403 YIVSNKIGLT---VNLG--------NALIDMFAKCGDVGEASKLFDEMAERNVVSWNTMI 451
Query: 392 SGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG-RWAHEYVLNNSI 450
+A + Q A+ LF + + P++IT + + + + SG + EG R+ E + I
Sbjct: 452 MAHAVHGQSEEAIRLFEQLKGENIVPDQITFLGLLASCSHSGLVSEGRRYFKEMEMFYRI 511
Query: 451 TLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANL 505
A +ID+ K G + AFEV + W A++ MHG+ +
Sbjct: 512 EPRVEHYACMIDLLGKVGLLEEAFEVARGMPMEADEAG-WGALLNACRMHGNVEI 565
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 102/413 (24%), Positives = 184/413 (44%), Gaps = 61/413 (14%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+ LV+A+ ++ G +H + + G+ + + N+L++++ KCG + A+ +FD
Sbjct: 246 VTLVAAVSAIGQMGLLAFGIMLHKYVTEGGVARSVNLDNALVDMFGKCGCVRYAREVFDG 305
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
D + M++ Y + L A ++F P + VS++ MI ++Q + EA+ +F
Sbjct: 306 MEVKDVYSWTSMVNAYAKCGDLESAEQLFKDMPRRNVVSWSCMIAAYSQLNQPEEAVWLF 365
Query: 144 RDMRILGVIPNEVTLASVISSSVHLG----GIWECRMLHGLVIKLMIDGFVIISTNLLNM 199
R+M GV P + TL SV+S+ LG G W + ++ I V + L++M
Sbjct: 366 REMIAAGVDPIDATLVSVLSACAQLGCLDLGRW---IYENYIVSNKIGLTVNLGNALIDM 422
Query: 200 YCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMI 259
+ C + EA LFDEM ERN+VSWN M+ A G E A LFE++ +++V
Sbjct: 423 FAKCGDVGEASKLFDEMAERNVVSWNTMIMAHAVHGQSEEAIRLFEQLKGENIV------ 476
Query: 260 DGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFD 319
P+ + + L+++C + EG + + +
Sbjct: 477 -------------------------PDQITFLGLLASCSHSGLVSEGRRYFKEM-----E 506
Query: 320 CYDFIQATIIHFYAAC-----GRINLARLQFELG----IKDHIASWNALIAGFIRNGMIE 370
+ I+ + H+ AC G++ L FE+ ++ A W AL+ +G +E
Sbjct: 507 MFYRIEPRVEHY--ACMIDLLGKVGLLEEAFEVARGMPMEADEAGWGALLNACRMHGNVE 564
Query: 371 DARQLFNNMQKRD-----VYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPN 418
+ + + + D +Y + I YA + + L M D GVK N
Sbjct: 565 IGACVADKLVELDPSDSGIYVLMSQI--YASKNKWDQVKMLRMTMRDRGVKKN 615
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 96/411 (23%), Positives = 169/411 (41%), Gaps = 75/411 (18%)
Query: 248 PSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLI--------SACGR 299
P + GTM+ G+L+ + AL ++R ++ D + + V + S G
Sbjct: 97 PGPNAYMLGTMMRGFLRARLPARALGLFRRVVRDRLPADARTFVFAVKAAAAAAESEHGG 156
Query: 300 AMAFGEGLQIHSIIVKAGFDCYD-FIQATIIHFYAACGRINLARLQFELGIKDHIASWNA 358
+ GE IH +K GF + ++HFYA ++ A F+ + + SW
Sbjct: 157 TPSGGEA--IHCAALKCGFVGESVLVGNALVHFYANHKSLDDAGKVFDEMPERDVVSWTT 214
Query: 359 LIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPN 418
L+ G+ R G+ ++A +LF M +V G++PN
Sbjct: 215 LVDGYARAGLADEAWRLFCRM------------------------------VVVGGMRPN 244
Query: 419 EITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFY 478
+T+V+ AI G L G H+YV + + NL A++DM+ KCG + A EVF
Sbjct: 245 AVTLVAAVSAIGQMGLLAFGIMLHKYVTEGGVARSVNLDNALVDMFGKCGCVRYAREVFD 304
Query: 479 HIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNI-----------KLNS----- 522
+ V W +++ A GD +++ D+ +RN+ +LN
Sbjct: 305 GM--EVKDVYSWTSMVNAYAKCGDLESAEQLFKDMPRRNVVSWSCMIAAYSQLNQPEEAV 362
Query: 523 ---------------ITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDL 567
T + VLS C G +DLG +++ + + ++D+
Sbjct: 363 WLFREMIAAGVDPIDATLVSVLSACAQLGCLDLGRWIYENYIVSNKIGLTVNLGNALIDM 422
Query: 568 LGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAG 618
+ G + +A ++ M + +VV W T++ A +HG E R + L G
Sbjct: 423 FAKCGDVGEASKLFDEMAER-NVVSWNTMIMAHAVHGQSEEAIRLFEQLKG 472
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 80/378 (21%), Positives = 153/378 (40%), Gaps = 54/378 (14%)
Query: 290 IVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYA---ACGRINLARLQFE 346
++ L+ +C +F LQ+H+++ G + F + ++ F A + A +
Sbjct: 38 LLSLLESCA---SFRRLLQLHALLTVTGLAAHRFPASRLLAFCALSTPPRLAHAAAILAR 94
Query: 347 LGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALEL 406
+ ++ GF+R + A LF + RD A +A A E
Sbjct: 95 ASPGPNAYMLGTMMRGFLRARLPARALGLFRRVV-RDRLPADARTFVFAVKAA-AAAAES 152
Query: 407 FHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAK 466
HG +G + ++ CA G + E S+ + + A++ YA
Sbjct: 153 EHGGTPSGGE-------AIHCAALKCGFVGE-----------SVLVGN----ALVHFYAN 190
Query: 467 CGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDL-EKRNIKLNSITF 525
S++ A +VF + +R V W ++ G A G A+ +++ + ++ N++T
Sbjct: 191 HKSLDDAGKVFDEMPER--DVVSWTTLVDGYARAGLADEAWRLFCRMVVVGGMRPNAVTL 248
Query: 526 IGVLSTCCHAGLVDLG---ERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIR 582
+ +S GL+ G +Y +V D +VD+ G+ G + A EV
Sbjct: 249 VAAVSAIGQMGLLAFGIMLHKYVTEGGVARSVNLD----NALVDMFGKCGCVRYAREVFD 304
Query: 583 SMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLS-----NIYADA 637
M +K DV W +++ A G++E E+ K + P R ++S Y+
Sbjct: 305 GMEVK-DVYSWTSMVNAYAKCGDLESAEQLFKDM--------PRRNVVSWSCMIAAYSQL 355
Query: 638 GRWEDAFSIRKEMRDCGM 655
+ E+A + +EM G+
Sbjct: 356 NQPEEAVWLFREMIAAGV 373
>gi|359495599|ref|XP_003635033.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Vitis vinifera]
Length = 650
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 164/438 (37%), Positives = 270/438 (61%), Gaps = 3/438 (0%)
Query: 227 MLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPN 286
+L +K ++ A +F+ + +V + +IDG++ EA+ +Y ML + I P+
Sbjct: 87 LLRSCSKCHAIDYASRIFQYTHNPNVYLYTALIDGFVSSGNYLEAIQLYSRMLHESILPD 146
Query: 287 DVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFE 346
+ ++ ++ ACG +A EG ++HS +K GF ++ I+ Y CG + AR FE
Sbjct: 147 NYLMASILKACGSQLALREGREVHSRALKLGFSSNRLVRLRIMELYGKCGELGDARRVFE 206
Query: 347 LGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALEL 406
+D +AS +I+ + G++E+A +F+ ++++D W+AMI G+ +NE+ N ALE
Sbjct: 207 EMPEDVVAS-TVMISSYSDQGLVEEAGAVFSRVRRKDTVCWTAMIDGFVRNEETNRALEA 265
Query: 407 FHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAK 466
F GM V+PNE T+V V A + G L+ GRW H Y+ I LN + A+I+MY++
Sbjct: 266 FRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNALINMYSR 325
Query: 467 CGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFI 526
CGSI+ A VF ++DR V +N +I GL+M+G + ++++ + R ++ ++TF+
Sbjct: 326 CGSIDEAQTVFDEMKDR--DVITYNTMISGLSMNGKSRQAIELFRVMVGRRLRPTNVTFV 383
Query: 527 GVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPM 586
GVL+ C H GLVD G F SM Y VEP ++HYGCMVDLLGR G+LE+A ++IR+M M
Sbjct: 384 GVLNACSHGGLVDFGFEIFHSMARDYRVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTMKM 443
Query: 587 KADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSI 646
D ++ GTLL+A ++H N+E+GE+ AK L + + VLLS++YA +G+W++A +
Sbjct: 444 TPDHIMLGTLLSACKMHKNLELGEQVAKELEDRGQADSGTYVLLSHVYASSGKWKEAAQV 503
Query: 647 RKEMRDCGMKRLPGFSGV 664
R +M++ GM++ PG S +
Sbjct: 504 RAKMKEAGMQKEPGCSSI 521
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 128/530 (24%), Positives = 238/530 (44%), Gaps = 78/530 (14%)
Query: 2 PLDHFHSVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQ 61
P H NS +L++ D + ++S L+ S HI +Q IH+ + ++G + F+
Sbjct: 29 PSPKPHPNSNSNPKSLKSLD-QKQIISLLQR-SRHI--NQVLPIHAQLIRNGHSQDPFMV 84
Query: 62 NSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCV 121
L+ +KC I A +F T +P N+ +
Sbjct: 85 FELLRSCSKCHAIDYASRIFQY--THNP---NVYL------------------------- 114
Query: 122 SYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLV 181
YT++I GF + + EA++++ M ++P+ +AS++ + + E R +H
Sbjct: 115 -YTALIDGFVSSGNYLEAIQLYSRMLHESILPDNYLMASILKACGSQLALREGREVHSRA 173
Query: 182 IKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELAR 241
+KL ++ ++ +Y C L +AR +F+EM E ++V+ VM++ ++ GLVE A
Sbjct: 174 LKLGFSSNRLVRLRIMELYGKCGELGDARRVFEEMPE-DVVASTVMISSYSDQGLVEEAG 232
Query: 242 ELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAM 301
+F R+ KD V W MIDG+++ E + AL +R M + + PN+ IV ++SAC +
Sbjct: 233 AVFSRVRRKDTVCWTAMIDGFVRNEETNRALEAFRGMQGENVRPNEFTIVCVLSACSQLG 292
Query: 302 AFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIA 361
A G +HS + K + F+ +I+ Y+ CG I+ A+ F+ + ++N +I+
Sbjct: 293 ALEIGRWVHSYMRKFEIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMIS 352
Query: 362 GFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEIT 421
G NG +RQ A+ELF MV ++P +T
Sbjct: 353 GLSMNG---KSRQ----------------------------AIELFRVMVGRRLRPTNVT 381
Query: 422 MVSVFCAIASSGTLKEG-RWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHI 480
V V A + G + G H + + ++D+ + G + A+++
Sbjct: 382 FVGVLNACSHGGLVDFGFEIFHSMARDYRVEPQIEHYGCMVDLLGRVGRLEEAYDLI--- 438
Query: 481 RDRTTSVSP----WNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFI 526
RT ++P ++ MH + L ++ +LE R + +S T++
Sbjct: 439 --RTMKMTPDHIMLGTLLSACKMHKNLELGEQVAKELEDRG-QADSGTYV 485
Score = 152 bits (385), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 101/353 (28%), Positives = 170/353 (48%), Gaps = 47/353 (13%)
Query: 26 LVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCS 85
+ S L+ C + +A+ +G+++HS K G SN ++ ++ LY KCG + A+ +F+
Sbjct: 150 MASILKACGSQLALREGREVHSRALKLGFSSNRLVRLRIMELYGKCGELGDARRVFEEMP 209
Query: 86 TLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRD 145
D VA +MIS Y + +A VF + K V +T+MI GF +N+ ALE FR
Sbjct: 210 E-DVVASTVMISSYSDQGLVEEAGAVFSRVRRKDTVCWTAMIDGFVRNEETNRALEAFRG 268
Query: 146 MRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSS 205
M+ V PNE T+ V+S+ LG + R +H + K I+ + + L+NMY C S
Sbjct: 269 MQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNALINMYSRCGS 328
Query: 206 LVEARSLFDEMKERNIVSWNVMLNGF---------------------------------- 231
+ EA+++FDEMK+R+++++N M++G
Sbjct: 329 IDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIELFRVMVGRRLRPTNVTFVGVLNA 388
Query: 232 -AKAGLVELARELFERIP-----SKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAP 285
+ GLV+ E+F + + +G M+D +V RL EA + R M + P
Sbjct: 389 CSHGGLVDFGFEIFHSMARDYRVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTM---KMTP 445
Query: 286 NDVMIVDLISACGRAMAFGEGLQIHSIIVKAG-FDCYDFIQATIIHFYAACGR 337
+ +M+ L+SAC G Q+ + G D ++ + H YA+ G+
Sbjct: 446 DHIMLGTLLSACKMHKNLELGEQVAKELEDRGQADSGTYV--LLSHVYASSGK 496
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/342 (21%), Positives = 138/342 (40%), Gaps = 61/342 (17%)
Query: 292 DLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKD 351
+IS R+ + L IH+ +++ G F+ ++ + C I+ A F+
Sbjct: 51 QIISLLQRSRHINQVLPIHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIFQYTHNP 110
Query: 352 HIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMV 411
++ + ALI GF+ +G +A QL++ M+
Sbjct: 111 NVYLYTALIDGFVSSGNYLEAIQLYSR-------------------------------ML 139
Query: 412 DAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSIN 471
+ P+ M S+ A S L+EGR H L + N + I+++Y KCG +
Sbjct: 140 HESILPDNYLMASILKACGSQLALREGREVHSRALKLGFSSNRLVRLRIMELYGKCGELG 199
Query: 472 TAFEVFYHI----------------------------RDRTTSVSPWNAIICGLAMHGDA 503
A VF + R R W A+I G + +
Sbjct: 200 DARRVFEEMPEDVVASTVMISSYSDQGLVEEAGAVFSRVRRKDTVCWTAMIDGFVRNEET 259
Query: 504 NLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGC 563
N L+ + ++ N++ N T + VLS C G +++G R+ S + +E +L
Sbjct: 260 NRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIG-RWVHSYMRKFEIELNLFVGNA 318
Query: 564 MVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGN 605
++++ R G +++A+ V M + DV+ + T+++ ++G
Sbjct: 319 LINMYSRCGSIDEAQTVFDEMKDR-DVITYNTMISGLSMNGK 359
>gi|356530090|ref|XP_003533617.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Glycine max]
Length = 566
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 196/576 (34%), Positives = 314/576 (54%), Gaps = 34/576 (5%)
Query: 88 DPVACNIMISGY-IRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDM 146
DP +I Y + + A +F + + MI G++ +D EA+ ++ M
Sbjct: 9 DPSTIYNLIKSYALSPSTILKAHNLFQQIHRPTLPFWNIMIRGWSVSDQPNEAIRMYNLM 68
Query: 147 RILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSL 206
G++ N +T + + + + +H V+KL + + +S L+NMY C
Sbjct: 69 YRQGLLGNNLTYLFLFKACARVPDVSCGSTIHARVLKLGFESHLYVSNALINMYGSC--- 125
Query: 207 VEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVE 266
G + LA+++F+ +P +D+VSW +++ GY Q +
Sbjct: 126 ----------------------------GHLGLAQKVFDEMPERDLVSWNSLVCGYGQCK 157
Query: 267 RLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQA 326
R E L ++ AM G+ + V +V ++ AC +G + I + + ++
Sbjct: 158 RFREVLGVFEAMRVAGVKGDAVTMVKVVLACTSLGEWGVADAMVDYIEENNVEIDVYLGN 217
Query: 327 TIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYS 386
T+I Y G ++LAR F+ ++ SWNA+I G+ + G + AR+LF+ M +RDV S
Sbjct: 218 TLIDMYGRRGLVHLARGVFDQMQWRNLVSWNAMIMGYGKAGNLVAARELFDAMSQRDVIS 277
Query: 387 WSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVL 446
W+ MI+ Y+Q Q AL LF M+++ VKP+EIT+ SV A A +G+L G AH+Y+
Sbjct: 278 WTNMITSYSQAGQFTEALRLFKEMMESKVKPDEITVASVLSACAHTGSLDVGEAAHDYIQ 337
Query: 447 NNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLT 506
+ + + A+IDMY KCG + A EVF +R + SVS W +II GLA++G A+
Sbjct: 338 KYDVKADIYVGNALIDMYCKCGVVEKALEVFKEMR-KKDSVS-WTSIISGLAVNGFADSA 395
Query: 507 LKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVD 566
L +S + + ++ + F+G+L C HAGLVD G YF+SM+ VY ++P++KHYGC+VD
Sbjct: 396 LDYFSRMLREVVQPSHGAFVGILLACAHAGLVDKGLEYFESMEKVYGLKPEMKHYGCVVD 455
Query: 567 LLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPS 626
LL R+G L+ A E I+ MP+ DVVIW LL+AS++HGN+ + E A K L L PS+ +
Sbjct: 456 LLSRSGNLQRAFEFIKEMPVTPDVVIWRILLSASQVHGNIPLAEIATKKLLELDPSNSGN 515
Query: 627 RVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
VL SN YA + RWEDA +R+ M +++ G S
Sbjct: 516 YVLSSNTYAGSNRWEDAVKMRELMEKSNVQKPSGSS 551
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 138/506 (27%), Positives = 237/506 (46%), Gaps = 72/506 (14%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
+ C+ VS G IH+ + K G ES+ ++ N+LIN+Y CG + A+ +FD D
Sbjct: 84 FKACARVPDVSCGSTIHARVLKLGFESHLYVSNALINMYGSCGHLGLAQKVFDEMPERDL 143
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
V+ N S++ G+ Q +RE L VF MR+
Sbjct: 144 VSWN-------------------------------SLVCGYGQCKRFREVLGVFEAMRVA 172
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
GV + VT+ V+ + LG + + + ++ V + L++MY + A
Sbjct: 173 GVKGDAVTMVKVVLACTSLGEWGVADAMVDYIEENNVEIDVYLGNTLIDMYGRRGLVHLA 232
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLS 269
R +FD+M+ RN+VSWN M+ G+ KAG + ARELF+ + +DV+SW MI Y Q + +
Sbjct: 233 RGVFDQMQWRNLVSWNAMIMGYGKAGNLVAARELFDAMSQRDVISWTNMITSYSQAGQFT 292
Query: 270 EALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATII 329
EAL +++ M+ + P+++ + ++SAC H+ + G +D+IQ
Sbjct: 293 EALRLFKEMMESKVKPDEITVASVLSACA-----------HTGSLDVGEAAHDYIQ---- 337
Query: 330 HFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSA 389
+ +K I NALI + + G++E A ++F M+K+D SW++
Sbjct: 338 ----------------KYDVKADIYVGNALIDMYCKCGVVEKALEVFKEMRKKDSVSWTS 381
Query: 390 MISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNS 449
+ISG A N + AL+ F M+ V+P+ V + A A +G + +G E +
Sbjct: 382 IISGLAVNGFADSALDYFSRMLREVVQPSHGAFVGILLACAHAGLVDKGLEYFE-SMEKV 440
Query: 450 ITLNDNLS--AAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGD---AN 504
L + ++D+ ++ G++ AFE F T V W ++ +HG+ A
Sbjct: 441 YGLKPEMKHYGCVVDLLSRSGNLQRAFE-FIKEMPVTPDVVIWRILLSASQVHGNIPLAE 499
Query: 505 LTLKIYSDLEKR---NIKLNSITFIG 527
+ K +L+ N L+S T+ G
Sbjct: 500 IATKKLLELDPSNSGNYVLSSNTYAG 525
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 66/136 (48%), Gaps = 5/136 (3%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E+ + S L C+ ++ G+ H I K ++++ ++ N+LI++Y KCG++ +A +F
Sbjct: 310 EITVASVLSACAHTGSLDVGEAAHDYIQKYDVKADIYVGNALIDMYCKCGVVEKALEVFK 369
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCV----SYTSMIMGFAQNDCWRE 138
D V+ +ISG N + A + F + + ++ +++ A +
Sbjct: 370 EMRKKDSVSWTSIISGLAVNGFADSALDYFSRMLREVVQPSHGAFVGILLACAHAGLVDK 429
Query: 139 ALEVFRDM-RILGVIP 153
LE F M ++ G+ P
Sbjct: 430 GLEYFESMEKVYGLKP 445
>gi|224091072|ref|XP_002309169.1| predicted protein [Populus trichocarpa]
gi|222855145|gb|EEE92692.1| predicted protein [Populus trichocarpa]
Length = 619
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 167/435 (38%), Positives = 263/435 (60%), Gaps = 9/435 (2%)
Query: 235 GLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLI 294
G + +F + ++ + TMI G + + E++ +Y +M +G++P+ L+
Sbjct: 56 GNTNYSHRIFHQTKEPNIFLFNTMIHGLVLNDSFQESIEIYHSMRKEGLSPDSFTFPFLL 115
Query: 295 SACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIA 354
AC R + G+++H ++VKAG + F+ +++ Y CG I+ A F+ + ++A
Sbjct: 116 KACARLLDSKLGIKLHGLVVKAGCESDAFVNTSLVSLYGKCGFIDNAFKVFDDIPEKNVA 175
Query: 355 SWNALIAGFIRNG-------MIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELF 407
+W A+I+G+I G M A +F+ M ++D+ SWS+MI GYA N P AL+LF
Sbjct: 176 AWTAIISGYIGVGKCREAIDMFRRACSVFDGMLEKDIVSWSSMIQGYASNGLPKEALDLF 235
Query: 408 HGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKC 467
M++ G +P+ MV V CA A G L+ G WA + N N L A+IDMYAKC
Sbjct: 236 FKMLNEGFRPDCYAMVGVLCACARLGALELGNWASNLMDRNEFLGNPVLGTALIDMYAKC 295
Query: 468 GSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIG 527
G +++A+EVF +R + V WNA I GLAM G ++ +EK I+ + TF+G
Sbjct: 296 GRMDSAWEVFRGMRKKDIVV--WNAAISGLAMSGHVKAAFGLFGQMEKSGIEPDGNTFVG 353
Query: 528 VLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMK 587
+L C HAGLVD G +YF SM+ V+ + P+++HYGCMVDLLGRAG L++A ++++SMPM+
Sbjct: 354 LLCACTHAGLVDEGRQYFNSMERVFTLTPEIEHYGCMVDLLGRAGFLDEAHQLVKSMPME 413
Query: 588 ADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIR 647
A+ ++WG LL R+H + ++ E K L L+PS+ + VLLSNIY+ + +WEDA IR
Sbjct: 414 ANAIVWGALLGGCRLHRDTQLVEGVLKQLIALEPSNSGNYVLLSNIYSASHKWEDAAKIR 473
Query: 648 KEMRDCGMKRLPGFS 662
M + G+K++PG+S
Sbjct: 474 SIMSERGIKKVPGYS 488
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 104/417 (24%), Positives = 188/417 (45%), Gaps = 42/417 (10%)
Query: 106 NDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSS 165
N + +F +T + +MI G ND ++E++E++ MR G+ P+ T ++ +
Sbjct: 59 NYSHRIFHQTKEPNIFLFNTMIHGLVLNDSFQESIEIYHSMRKEGLSPDSFTFPFLLKAC 118
Query: 166 VHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWN 225
L LHGLV+K + ++T+L+++Y C + A +FD++ E+N+ +W
Sbjct: 119 ARLLDSKLGIKLHGLVVKAGCESDAFVNTSLVSLYGKCGFIDNAFKVFDDIPEKNVAAWT 178
Query: 226 VMLNGFAKAGLVELARELFERIPS-------KDVVSWGTMIDGYLQVERLSEALTMYRAM 278
+++G+ G A ++F R S KD+VSW +MI GY EAL ++ M
Sbjct: 179 AIISGYIGVGKCREAIDMFRRACSVFDGMLEKDIVSWSSMIQGYASNGLPKEALDLFFKM 238
Query: 279 LCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRI 338
L +G P+ +V ++ AC R A G +++ + F + +I YA CGR+
Sbjct: 239 LNEGFRPDCYAMVGVLCACARLGALELGNWASNLMDRNEFLGNPVLGTALIDMYAKCGRM 298
Query: 339 NLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNE 398
+ A F K I WNA I+G +G ++ A LF M+K
Sbjct: 299 DSAWEVFRGMRKKDIVVWNAAISGLAMSGHVKAAFGLFGQMEK----------------- 341
Query: 399 QPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLS- 457
+G++P+ T V + CA +G + EGR + + TL +
Sbjct: 342 --------------SGIEPDGNTFVGLLCACTHAGLVDEGR-QYFNSMERVFTLTPEIEH 386
Query: 458 -AAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDL 513
++D+ + G ++ A ++ + ++ W A++ G +H D L + L
Sbjct: 387 YGCMVDLLGRAGFLDEAHQLVKSMPMEANAIV-WGALLGGCRLHRDTQLVEGVLKQL 442
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 74/241 (30%), Positives = 121/241 (50%), Gaps = 7/241 (2%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
L+ C+ + G ++H L+ K+G ES+ F+ SL++LY KCG I A +FD +
Sbjct: 115 LKACARLLDSKLGIKLHGLVVKAGCESDAFVNTSLVSLYGKCGFIDNAFKVFDDIPEKNV 174
Query: 90 VACNIMISGYIRNDRLNDARE-------VFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
A +ISGYI + +A + VFD K VS++SMI G+A N +EAL++
Sbjct: 175 AAWTAIISGYIGVGKCREAIDMFRRACSVFDGMLEKDIVSWSSMIQGYASNGLPKEALDL 234
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
F M G P+ + V+ + LG + L+ + G ++ T L++MY
Sbjct: 235 FFKMLNEGFRPDCYAMVGVLCACARLGALELGNWASNLMDRNEFLGNPVLGTALIDMYAK 294
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
C + A +F M++++IV WN ++G A +G V+ A LF ++ + G G
Sbjct: 295 CGRMDSAWEVFRGMRKKDIVVWNAAISGLAMSGHVKAAFGLFGQMEKSGIEPDGNTFVGL 354
Query: 263 L 263
L
Sbjct: 355 L 355
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/353 (18%), Positives = 136/353 (38%), Gaps = 73/353 (20%)
Query: 308 QIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNG 367
+H+ +++ G D ++ ++ F G N + F + +I +N +I G + N
Sbjct: 28 HVHAALLRLGLDEDSYLLNKVLRFSFNFGNTNYSHRIFHQTKEPNIFLFNTMIHGLVLND 87
Query: 368 MIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFC 427
++ ++E++H M G+ P+ T +
Sbjct: 88 SFQE-------------------------------SIEIYHSMRKEGLSPDSFTFPFLLK 116
Query: 428 AIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTS- 486
A A K G H V+ + ++ +++ +Y KCG I+ AF+VF I ++ +
Sbjct: 117 ACARLLDSKLGIKLHGLVVKAGCESDAFVNTSLVSLYGKCGFIDNAFKVFDDIPEKNVAA 176
Query: 487 -----------------------------------VSPWNAIICGLAMHGDANLTLKIYS 511
+ W+++I G A +G L ++
Sbjct: 177 WTAIISGYIGVGKCREAIDMFRRACSVFDGMLEKDIVSWSSMIQGYASNGLPKEALDLFF 236
Query: 512 DLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSM-KSVYNVEPDLKHYGCMVDLLGR 570
+ + + +GVL C G ++LG M ++ + P L ++D+ +
Sbjct: 237 KMLNEGFRPDCYAMVGVLCACARLGALELGNWASNLMDRNEFLGNPVLG--TALIDMYAK 294
Query: 571 AGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEV--GERAAKSLAGLQP 621
G+++ A EV R M K D+V+W ++ + G+V+ G +G++P
Sbjct: 295 CGRMDSAWEVFRGM-RKKDIVVWNAAISGLAMSGHVKAAFGLFGQMEKSGIEP 346
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 48/243 (19%), Positives = 89/243 (36%), Gaps = 72/243 (29%)
Query: 25 ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSC 84
A+V L C+ A+ G +L+ ++ N + +LI++YAKCG
Sbjct: 249 AMVGVLCACARLGALELGNWASNLMDRNEFLGNPVLGTALIDMYAKCG------------ 296
Query: 85 STLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFR 144
R++ A EVF K V + + I G A + + A +F
Sbjct: 297 -------------------RMDSAWEVFRGMRKKDIVVWNAAISGLAMSGHVKAAFGLFG 337
Query: 145 DMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCS 204
M G+ P+ T ++ + H G ++D
Sbjct: 338 QMEKSGIEPDGNTFVGLLCACTHAG---------------LVD----------------- 365
Query: 205 SLVEARSLFDEMKE-----RNIVSWNVMLNGFAKAGLVELARELFERIPSK-DVVSWGTM 258
E R F+ M+ I + M++ +AG ++ A +L + +P + + + WG +
Sbjct: 366 ---EGRQYFNSMERVFTLTPEIEHYGCMVDLLGRAGFLDEAHQLVKSMPMEANAIVWGAL 422
Query: 259 IDG 261
+ G
Sbjct: 423 LGG 425
>gi|357154550|ref|XP_003576820.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Brachypodium distachyon]
Length = 657
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 189/575 (32%), Positives = 303/575 (52%), Gaps = 33/575 (5%)
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
+A +S R+ L AR +FD+ P Y +++ ++ +DC +EAL + R +
Sbjct: 49 IASYCTLSAGDRDGGLCHARRLFDRIPEPDRFMYNTLVRAYSNSDCPQEALRLHRGVLQR 108
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
G++PNE TL V+ + + + HG+V+KL GFV
Sbjct: 109 GILPNEFTLPFVLKACTTVRAVEHALAAHGVVVKL---GFV------------------- 146
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLS 269
+ I N +L+ A AG + +R F + ++VVSW TMI GY Q +S
Sbjct: 147 ---------QQIFVANALLHFHASAGSLRDSRRFFGEMADRNVVSWNTMIGGYAQAGEVS 197
Query: 270 EALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATII 329
EA ++ M G+ + +V L+ AC G +H ++ +G + ++
Sbjct: 198 EACALFGEMRHQGLLADVFTLVSLLFACSSEGNLEVGRLVHCHMLVSGSRVDRILGNALL 257
Query: 330 HFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSA 389
Y CG + +A F++ ++ +W +++ ++G ++ R F M +R++ SW+A
Sbjct: 258 DMYGKCGDLWMAHRCFDMMPIKNVVTWTSMLCAQAKHGSVDAVRDWFEQMPERNIVSWNA 317
Query: 390 MISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNS 449
MIS Y Q + + L+L++ M G+ P+E T+ V A +G L G+ H YV +N
Sbjct: 318 MISCYVQCGRLHETLDLYNRMRSLGITPDEFTLAGVLSACGQNGDLASGKMIHCYVRDNF 377
Query: 450 ITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKI 509
L +++DMYA+CG ++TA +F + ++ +V WN II LAMHG A T+
Sbjct: 378 NDPGVTLLNSLLDMYARCGQVDTAIGLFTEMPNK--NVISWNVIIGALAMHGRAQETVTF 435
Query: 510 YSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLG 569
+ + + ITF+G+LS C H GL++ GE YF++M VYNVEP+++HYGCMVDLLG
Sbjct: 436 FRTMVSDAFSPDEITFVGLLSACSHGGLLEAGEYYFEAMARVYNVEPEVEHYGCMVDLLG 495
Query: 570 RAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVL 629
R G L A +I+ M +K DVV+WG LL A RIHGNVE+G+ K L L+ G VL
Sbjct: 496 RRGHLAKAVNLIKDMSIKPDVVVWGALLGACRIHGNVEIGKLVIKQLLELEGITGGLFVL 555
Query: 630 LSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
+ N++ + +WED +RK M++ G K+ G S +
Sbjct: 556 ICNLFYETNQWEDMKKLRKLMKEQGTKKDMGVSSI 590
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 130/512 (25%), Positives = 217/512 (42%), Gaps = 82/512 (16%)
Query: 13 QKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCG 72
Q+ L N E L L+ C+ AV H ++ K G F+ N+L++ +A G
Sbjct: 107 QRGILPN---EFTLPFVLKACTTVRAVEHALAAHGVVVKLGFVQQIFVANALLHFHASAG 163
Query: 73 LISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQ 132
+ ++ F + + V+ N MI GY AQ
Sbjct: 164 SLRDSRRFFGEMADRNVVSWNTMIGGY-------------------------------AQ 192
Query: 133 NDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHG--LVIKLMIDGFV 190
EA +F +MR G++ + TL S++ + G + R++H LV +D
Sbjct: 193 AGEVSEACALFGEMRHQGLLADVFTLVSLLFACSSEGNLEVGRLVHCHMLVSGSRVDR-- 250
Query: 191 IISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSK 250
I+ LL+MY C L A FD M +N+V+W ML AK G V+ R+ FE++P +
Sbjct: 251 ILGNALLDMYGKCGDLWMAHRCFDMMPIKNVVTWTSMLCAQAKHGSVDAVRDWFEQMPER 310
Query: 251 DVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIH 310
++VSW MI Y+Q RL E L +Y M GI P++ + ++SACG+ G IH
Sbjct: 311 NIVSWNAMISCYVQCGRLHETLDLYNRMRSLGITPDEFTLAGVLSACGQNGDLASGKMIH 370
Query: 311 SIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIE 370
+ D + +++ YA CG+++ A +G+
Sbjct: 371 CYVRDNFNDPGVTLLNSLLDMYARCGQVDTA-----IGL--------------------- 404
Query: 371 DARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIA 430
F M ++V SW+ +I A + + + F MV P+EIT V + A +
Sbjct: 405 -----FTEMPNKNVISWNVIIGALAMHGRAQETVTFFRTMVSDAFSPDEITFVGLLSACS 459
Query: 431 SSGTLKEGRWAHEYVLN-NSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSP 489
G L+ G + E + ++ ++D+ + G + A + I+D S+ P
Sbjct: 460 HGGLLEAGEYYFEAMARVYNVEPEVEHYGCMVDLLGRRGHLAKAVNL---IKD--MSIKP 514
Query: 490 ----WNAIICGLAMHGD---ANLTLKIYSDLE 514
W A++ +HG+ L +K +LE
Sbjct: 515 DVVVWGALLGACRIHGNVEIGKLVIKQLLELE 546
>gi|357469751|ref|XP_003605160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355506215|gb|AES87357.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1026
Score = 337 bits (863), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 174/490 (35%), Positives = 277/490 (56%), Gaps = 2/490 (0%)
Query: 175 RMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKA 234
RML G +K + ++ Y C L + E +I N +
Sbjct: 147 RMLLGGTLKPDNHTYPLLLKGCCGQYSSCLGLGVLGHVLKFGFECDIFVHNASITMLLSC 206
Query: 235 GLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLI 294
G + +A ++F + +D+V+W +MI G ++ EA+ +Y+ M + + PN++ ++ +I
Sbjct: 207 GELSVAYDVFNKSRVRDLVTWNSMITGCVKRGLAIEAIKIYKEMEAEKVRPNEITMIGMI 266
Query: 295 SACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIA 354
S+C + G + H I + G + + ++ Y CG + AR+ F+ + +
Sbjct: 267 SSCSQVQDLNLGKEFHCYIKEHGLEFTIPLTNALMDMYVKCGELLTARVLFDNMAQKTLV 326
Query: 355 SWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAG 414
SW ++ G+ R G ++ AR++ + ++ V W+A+ISG Q +Q AL LFH M
Sbjct: 327 SWTTMVLGYARFGFLDVAREILYKIPEKSVVPWNAIISGCVQAKQGKEALALFHEMQIRT 386
Query: 415 VKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAF 474
++P+++TMV+ A + G L G W H Y+ + ++++ L A++DMYAKCG+I A
Sbjct: 387 IEPDKVTMVNCLSACSQLGALDVGIWIHHYIERHKLSIDVALGTALVDMYAKCGNIARAL 446
Query: 475 EVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCH 534
+VF I R W A+ICGLA+HG+A L +S + I + ITF+GVLS CCH
Sbjct: 447 QVFEEIPQRNCLT--WTAVICGLALHGNAQDALSYFSKMIHIGIVPDEITFLGVLSACCH 504
Query: 535 AGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWG 594
GLV+ G +YF M S +NV P LKHY CMVDLLGRAG LE+AEE++++MPM AD + G
Sbjct: 505 GGLVEEGRKYFSEMSSKFNVSPKLKHYSCMVDLLGRAGHLEEAEELVKNMPMAADAAVLG 564
Query: 595 TLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCG 654
L A R++GNV++GER A L + P + VLL+++Y++A W++A S RK M D G
Sbjct: 565 ALFFACRVYGNVQIGERTAFKLLEIDPQDSGNYVLLASMYSEAKMWKEARSARKLMNDKG 624
Query: 655 MKRLPGFSGV 664
+++ PG S V
Sbjct: 625 VEKTPGCSLV 634
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 122/455 (26%), Positives = 205/455 (45%), Gaps = 77/455 (16%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
L+ C + G + + K G E + F+ N+ I + CG
Sbjct: 165 LKGCCGQYSSCLGLGVLGHVLKFGFECDIFVHNASITMLLSCG----------------- 207
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
L+ A +VF+K+ ++ V++ SMI G + EA++++++M
Sbjct: 208 --------------ELSVAYDVFNKSRVRDLVTWNSMITGCVKRGLAIEAIKIYKEMEAE 253
Query: 150 GVIPNEVTLASVISS-----SVHLGGIWECRML-HGLVIKLMIDGFVIISTN-LLNMYCV 202
V PNE+T+ +ISS ++LG + C + HGL F I TN L++MY
Sbjct: 254 KVRPNEITMIGMISSCSQVQDLNLGKEFHCYIKEHGL-------EFTIPLTNALMDMYVK 306
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
C L+ AR LFD M ++ +VSW M+ G+A+ G +++ARE+ +IP K VV W +I G
Sbjct: 307 CGELLTARVLFDNMAQKTLVSWTTMVLGYARFGFLDVAREILYKIPEKSVVPWNAIISGC 366
Query: 263 LQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD 322
+Q ++ EAL ++ M I P+ V +V+ +SAC + A G+ IH I +
Sbjct: 367 VQAKQGKEALALFHEMQIRTIEPDKVTMVNCLSACSQLGALDVGIWIHHYIERHKLSIDV 426
Query: 323 FIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKR 382
+ ++ YA CG I A FE + + +W A+I G +G +D
Sbjct: 427 ALGTALVDMYAKCGNIARALQVFEEIPQRNCLTWTAVICGLALHGNAQD----------- 475
Query: 383 DVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGR-WA 441
AL F M+ G+ P+EIT + V A G ++EGR +
Sbjct: 476 --------------------ALSYFSKMIHIGIVPDEITFLGVLSACCHGGLVEEGRKYF 515
Query: 442 HEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEV 476
E +++ + ++D+ + G + A E+
Sbjct: 516 SEMSSKFNVSPKLKHYSCMVDLLGRAGHLEEAEEL 550
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 106/456 (23%), Positives = 193/456 (42%), Gaps = 85/456 (18%)
Query: 196 LLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVEL-----AREL------F 244
LL++ C SLV+ + + +M VS ++ NGFA + LV ++EL
Sbjct: 60 LLSILERCKSLVQLKQIQAQM-----VSTGLIENGFAASRLVAFCALSESKELDYCTRIL 114
Query: 245 ERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDG-IAPNDVMIVDLISACGRAMAF 303
RI +V SW I GY++ + +Y+ ML G + P++ L+ C +
Sbjct: 115 YRIKELNVFSWNAAIRGYVESGDIEGGFMLYKRMLLGGTLKPDNHTYPLLLKGCCGQYSS 174
Query: 304 GEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGF 363
GL + ++K GF+C F+ I +CG +++A F + +WN++I G
Sbjct: 175 CLGLGVLGHVLKFGFECDIFVHNASITMLLSCGELSVAYDVFNKSRVRDLVTWNSMITGC 234
Query: 364 IRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMV 423
++ G+ +A +++ M+ V+PNEITM+
Sbjct: 235 VKRGLAIEAIKIYKEMEAEK-------------------------------VRPNEITMI 263
Query: 424 SVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDR 483
+ + + L G+ H Y+ + + L+ A++DMY KCG + TA +F ++ +
Sbjct: 264 GMISSCSQVQDLNLGKEFHCYIKEHGLEFTIPLTNALMDMYVKCGELLTARVLFDNMAQK 323
Query: 484 T-----------------------------TSVSPWNAIICGLAMHGDANLTLKIYSDLE 514
T SV PWNAII G L ++ +++
Sbjct: 324 TLVSWTTMVLGYARFGFLDVAREILYKIPEKSVVPWNAIISGCVQAKQGKEALALFHEMQ 383
Query: 515 KRNIKLNSITFIGVLSTCCHAGLVDLG---ERYFKSMKSVYNVEPDLKHYGCMVDLLGRA 571
R I+ + +T + LS C G +D+G Y + K + D+ +VD+ +
Sbjct: 384 IRTIEPDKVTMVNCLSACSQLGALDVGIWIHHYIERHK----LSIDVALGTALVDMYAKC 439
Query: 572 GQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVE 607
G + A +V +P + + + W ++ +HGN +
Sbjct: 440 GNIARALQVFEEIPQR-NCLTWTAVICGLALHGNAQ 474
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/361 (23%), Positives = 164/361 (45%), Gaps = 69/361 (19%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E+ ++ + CS ++ G++ H I + GLE + N+L+++Y KCG + A+ +FD
Sbjct: 259 EITMIGMISSCSQVQDLNLGKEFHCYIKEHGLEFTIPLTNALMDMYVKCGELLTARVLFD 318
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+ + V+ M+ GY R L+ ARE+ K P K V + ++I G Q +EAL +
Sbjct: 319 NMAQKTLVSWTTMVLGYARFGFLDVAREILYKIPEKSVVPWNAIISGCVQAKQGKEALAL 378
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLG----GIWECRMLHGLVIKLMIDGFVIISTNLLN 198
F +M+I + P++VT+ + +S+ LG GIW +H + + + V + T L++
Sbjct: 379 FHEMQIRTIEPDKVTMVNCLSACSQLGALDVGIW----IHHYIERHKLSIDVALGTALVD 434
Query: 199 MYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTM 258
MY C ++ A +F+E+ +RN ++W ++ G A G +
Sbjct: 435 MYAKCGNIARALQVFEEIPQRNCLTWTAVICGLALHGNAQ-------------------- 474
Query: 259 IDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGF 318
+AL+ + M+ GI P+++ + ++SAC H +V+
Sbjct: 475 -----------DALSYFSKMIHIGIVPDEITFLGVLSAC-----------CHGGLVEE-- 510
Query: 319 DCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNN 378
GR + + + + + ++ ++ R G +E+A +L N
Sbjct: 511 -----------------GRKYFSEMSSKFNVSPKLKHYSCMVDLLGRAGHLEEAEELVKN 553
Query: 379 M 379
M
Sbjct: 554 M 554
>gi|297822703|ref|XP_002879234.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297325073|gb|EFH55493.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 740
Score = 337 bits (863), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 202/661 (30%), Positives = 333/661 (50%), Gaps = 68/661 (10%)
Query: 7 HSVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLIN 66
H F++ N++ +S + CS+ + Q +Q H+ + ++G+ S+ + S
Sbjct: 15 HPNFSNPNQPTTNNERSRHTISLIDRCSS---LRQLKQTHAHMIRTGMFSDPY---SASK 68
Query: 67 LYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSM 126
L+A L S A L AR+VFD+ P ++ ++
Sbjct: 69 LFAIAALSSFAS--------------------------LEYARKVFDEIPQPNSFTWNTL 102
Query: 127 IMGFAQNDCWREALEVFRDM--RILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKL 184
I +A ++ F DM PN+ T +I ++ + + + LHG+ IK
Sbjct: 103 IRAYASGPDPVCSIWAFLDMVSSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAIKS 162
Query: 185 MIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELF 244
+ V ++ +L++ Y C L A +F +KE
Sbjct: 163 AVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKE-------------------------- 196
Query: 245 ERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFG 304
KDVVSW +MI+G++Q +AL +++ M + + + V +V ++SAC +
Sbjct: 197 -----KDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRDLE 251
Query: 305 EGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFI 364
G ++ S I + + + ++ Y CG I A+ F+ + +W ++ G+
Sbjct: 252 FGRRVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYA 311
Query: 365 RNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGM-VDAGVKPNEITMV 423
+ E AR++ N M K+D+ +W+A+IS Y QN +PN AL +FH + + +K N+IT+V
Sbjct: 312 ISEDYEAAREVLNAMPKKDIVAWNALISAYEQNGKPNEALLVFHELQLQKNIKLNQITLV 371
Query: 424 SVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDR 483
S A A G L+ GRW H Y+ N I +N +++A+I MY+KCG + A EVF + R
Sbjct: 372 STLSACAQVGALELGRWIHSYIKKNGIKMNFYVTSALIHMYSKCGDLEKAREVFNSVEKR 431
Query: 484 TTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGER 543
V W+A+I GLAMHG + + ++ +++ N+K N +TF V C H GLVD E
Sbjct: 432 DVFV--WSAMIGGLAMHGCGSEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAES 489
Query: 544 YFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIH 603
F M+S Y + P+ KHY C+VD+LGR+G LE A + I +MP+ +WG LL A +IH
Sbjct: 490 LFYKMESSYGIVPEDKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIH 549
Query: 604 GNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSG 663
N+ + E A L L+P + + VLLSNIYA +G+W++ +RK MR G+K+ PG S
Sbjct: 550 ANLSLAEMACTRLLELEPRNDGAHVLLSNIYAKSGKWDNVSELRKHMRVTGLKKEPGCSS 609
Query: 664 V 664
+
Sbjct: 610 I 610
>gi|357480897|ref|XP_003610734.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512069|gb|AES93692.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 726
Score = 337 bits (863), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 183/484 (37%), Positives = 277/484 (57%), Gaps = 39/484 (8%)
Query: 177 LHGLVIKLMIDGFV---IISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAK 233
+HGL KL GFV I T L+ MY C +++AR LFD
Sbjct: 143 IHGLASKL---GFVDDPFIQTGLIAMYASCRRIMDARLLFD------------------- 180
Query: 234 AGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDL 293
++ D V+W +IDGY Q +AL ++ M + P+ V++ +
Sbjct: 181 ------------KMCHPDAVAWNMIIDGYCQNGHYDDALRLFEDMRSSDMKPDSVILCTV 228
Query: 294 ISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHI 353
+SACG A G IH + G+ +Q +I+ YA CG ++LAR ++ H+
Sbjct: 229 LSACGHAGNLSYGRTIHEFVKDNGYAIDSHLQTALINMYANCGAMDLARKIYDGLSSKHL 288
Query: 354 ASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDA 413
A+++G+ + GM++DAR +F+ M +RD+ WSAMISGYA+++QP AL+LF M+
Sbjct: 289 IVSTAMLSGYAKLGMVKDARFIFDQMIERDLVCWSAMISGYAESDQPQEALKLFDEMLQK 348
Query: 414 GVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTA 473
P++ITM+SV A + G L + W H YV + +++ A+IDMYAKCG++ A
Sbjct: 349 RSVPDQITMLSVISACSHVGALAQANWIHTYVDRSGFGRALSVNNALIDMYAKCGNLVKA 408
Query: 474 FEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCC 533
EVF ++ + +V W+++I AMHG+A+ +K++ +++ NI+ N +TFIGVL C
Sbjct: 409 REVFENMPRK--NVISWSSMINAFAMHGNADSAIKLFRRMKEVNIEPNGVTFIGVLYACG 466
Query: 534 HAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIW 593
HAGLV+ GE+ F SM + + + P +HYGCMVDL RA L A E+I +MP +V+IW
Sbjct: 467 HAGLVEEGEKLFSSMINEHGISPTREHYGCMVDLYCRANFLRKAIELIETMPFAPNVIIW 526
Query: 594 GTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDC 653
G+L++A ++HG E+GE AAK L L+P H + V+LSNIYA RW D IRK M
Sbjct: 527 GSLMSACQVHGEAELGEFAAKRLLELEPDHDGALVVLSNIYAKEKRWNDVGLIRKSMSYK 586
Query: 654 GMKR 657
G+ +
Sbjct: 587 GISK 590
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 128/490 (26%), Positives = 225/490 (45%), Gaps = 78/490 (15%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+ S L+ S A + G +IH L K G + FIQ LI +YA C
Sbjct: 122 FSFPSLLKAVSKVSAFNHGLEIHGLASKLGFVDDPFIQTGLIAMYASC------------ 169
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
R+ DAR +FDK V++ +I G+ QN + +AL +F
Sbjct: 170 -------------------RRIMDARLLFDKMCHPDAVAWNMIIDGYCQNGHYDDALRLF 210
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVI---ISTNLLNMY 200
DMR + P+ V L +V+S+ H G + R +H V +G+ I + T L+NMY
Sbjct: 211 EDMRSSDMKPDSVILCTVLSACGHAGNLSYGRTIHEFVKD---NGYAIDSHLQTALINMY 267
Query: 201 CVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMID 260
C ++ AR ++D + ++++ ML+G+AK G+V+ AR +F+++ +D+V W MI
Sbjct: 268 ANCGAMDLARKIYDGLSSKHLIVSTAMLSGYAKLGMVKDARFIFDQMIERDLVCWSAMIS 327
Query: 261 GYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDC 320
GY + ++ EAL ++ ML P+ + ++ +ISAC A + IH+ + ++GF
Sbjct: 328 GYAESDQPQEALKLFDEMLQKRSVPDQITMLSVISACSHVGALAQANWIHTYVDRSGFGR 387
Query: 321 YDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ 380
+ +I YA CG + AR FE + ++ SW+++I F +G
Sbjct: 388 ALSVNNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAMHG------------- 434
Query: 381 KRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRW 440
+ A++LF M + ++PN +T + V A +G ++EG
Sbjct: 435 ------------------NADSAIKLFRRMKEVNIEPNGVTFIGVLYACGHAGLVEEGEK 476
Query: 441 AHEYVLN-NSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSP----WNAIIC 495
++N + I+ ++D+Y + + A E+ T +P W +++
Sbjct: 477 LFSSMINEHGISPTREHYGCMVDLYCRANFLRKAIELI-----ETMPFAPNVIIWGSLMS 531
Query: 496 GLAMHGDANL 505
+HG+A L
Sbjct: 532 ACQVHGEAEL 541
>gi|225450565|ref|XP_002281942.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910
isoform 1 [Vitis vinifera]
Length = 672
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 188/458 (41%), Positives = 261/458 (56%), Gaps = 38/458 (8%)
Query: 238 ELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISAC 297
E + +F+ + +V W MI ++ +A+ +Y M+ PN ++ AC
Sbjct: 88 ESSLRVFDFVRKPNVFLWNCMIKVCIENNEPFKAILLYYEMMVAHFRPNKYTYPAVLKAC 147
Query: 298 GRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLAR--------------- 342
A EG+Q+H+ +VK G I ++ I YA+ GR+ AR
Sbjct: 148 SDAGVVAEGVQVHAHLVKHGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCW 207
Query: 343 -------LQF-------EL--GIKDH--IASWNALIAGFIRNGMIEDARQLFNNMQKRDV 384
L+F EL G+ D I++WNA+I+GF R GM+E AR+ F+ M++RD
Sbjct: 208 NAMIDGYLRFGEVEAARELFEGMPDRSMISTWNAMISGFSRCGMVEVAREFFDEMKERDE 267
Query: 385 YSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEY 444
SWSAMI GY Q ALE+FH M ++P + + SV A A+ G L +GRW H Y
Sbjct: 268 ISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTY 327
Query: 445 VLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDAN 504
NSI L+ L +++DMYAKCG I+ A+EVF + ++ VS WNA+I GLAMHG A
Sbjct: 328 AKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNK--EVSSWNAMIGGLAMHGRAE 385
Query: 505 LTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCM 564
+ ++S K +I N ITF+GVL+ C H GLV G F SM+ Y VEP ++HYGC+
Sbjct: 386 DAIDLFS---KMDINPNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCI 442
Query: 565 VDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHG 624
VDLLGRAG L +AE+V+ S+P + +WG LL A R HGNVE+GER K L L+P +
Sbjct: 443 VDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHGNVELGERVGKILLELEPQNS 502
Query: 625 PSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
LLSNIYA AGRWE+ +RK M++ G+K PG S
Sbjct: 503 GRYTLLSNIYAKAGRWEEVGEVRKLMKERGIKTTPGTS 540
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 136/557 (24%), Positives = 227/557 (40%), Gaps = 108/557 (19%)
Query: 2 PLDHFHSVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQ 61
P H H + N ++ L C+ ++ +Q H+LI ++G +++I
Sbjct: 12 PYHHHHLIPNGHSTETSKLSHKAILHLLNTQCTT--SLHHLKQAHALILRTGHLQDSYIA 69
Query: 62 NSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCV 121
SL+ YA N+ + Y+ + VFD
Sbjct: 70 GSLVKSYA-----------------------NVSTNRYLS---FESSLRVFDFVRKPNVF 103
Query: 122 SYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLV 181
+ MI +N+ +A+ ++ +M + PN+ T +V+ + G + E +H +
Sbjct: 104 LWNCMIKVCIENNEPFKAILLYYEMMVAHFRPNKYTYPAVLKACSDAGVVAEGVQVHAHL 163
Query: 182 IKLMIDGFVIISTNLLNMYCVCSSLVEAR------------------------------- 210
+K + G I ++ + MY LVEAR
Sbjct: 164 VKHGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCWNAMIDGYLRFGEVEAA 223
Query: 211 -SLFDEMKERNIVS-WNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERL 268
LF+ M +R+++S WN M++GF++ G+VE+ARE F+ + +D +SW MIDGY+Q
Sbjct: 224 RELFEGMPDRSMISTWNAMISGFSRCGMVEVAREFFDEMKERDEISWSAMIDGYIQEGCF 283
Query: 269 SEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATI 328
EAL ++ M + I P ++ ++SAC A +G IH+ + + ++
Sbjct: 284 MEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGTSL 343
Query: 329 IHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWS 388
+ YA CGRI+LA FE ++SWNA+I G +G EDA LF+ M
Sbjct: 344 VDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKMD-------- 395
Query: 389 AMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG-----RWAHE 443
+ PNEIT V V A A G +++G E
Sbjct: 396 --------------------------INPNEITFVGVLNACAHGGLVQKGLTIFNSMRKE 429
Query: 444 YVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDA 503
Y + I I+D+ + G + A +V I T + W A++ HG+
Sbjct: 430 YGVEPQI----EHYGCIVDLLGRAGLLTEAEKVVSSIPTEPTP-AVWGALLGACRKHGNV 484
Query: 504 NL---TLKIYSDLEKRN 517
L KI +LE +N
Sbjct: 485 ELGERVGKILLELEPQN 501
>gi|449476974|ref|XP_004154891.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Cucumis sativus]
Length = 759
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 204/589 (34%), Positives = 315/589 (53%), Gaps = 49/589 (8%)
Query: 111 VFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGG 170
+F +P Y+ M+ +++ + + +F+ L + P +I + G
Sbjct: 56 IFTSSPSPDASVYSCMLKYYSRMGAHNQVVSLFKCTHSLNLRPQPFVYIYLIKLAGKSGN 115
Query: 171 IWECRMLHGLVIKL--MIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKER--------- 219
M H V+KL + D F I +L+MY + AR+LF++M ER
Sbjct: 116 -----MFHAYVLKLGHIDDHF--IRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMI 168
Query: 220 ----------------------NIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGT 257
NI++W M+ G+AK G +E AR F+ +P + VVSW
Sbjct: 169 SGCWKSGNETEAVVLFNMMPARNIITWTSMVTGYAKMGDLESARRYFDEMPERSVVSWNA 228
Query: 258 MIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAG 317
M Y Q E EAL ++ ML +GI P+D V IS+C I +I +
Sbjct: 229 MQSAYAQKECPKEALNLFHQMLEEGITPDDTTWVVTISSCSSIGDPTLADSILRMIDQKH 288
Query: 318 FDCYDFIQATIIHFYAACGRINLARLQF-ELGIKDHIASWNALIAGFIRNGMIEDARQLF 376
F++ ++ +A G + +AR F ELG + + +WN +I+ + R G + AR+LF
Sbjct: 289 IVLNSFVKTALLDMHAKFGNLEIARNIFDELGSQRNAVTWNIMISAYTRVGKLSLARELF 348
Query: 377 NNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDA-GVKPNEITMVSVFCAIASSGTL 435
+NM KRDV SW++MI+GYAQN + M++ELF M+ ++P+E+T+ SV A G L
Sbjct: 349 DNMPKRDVVSWNSMIAGYAQNGESAMSIELFKEMISCMDIQPDEVTIASVLSACGHIGAL 408
Query: 436 KEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIIC 495
K W + V +I L + ++I MY+KCGS+ A +F + R V +N +I
Sbjct: 409 KLSYWVLDIVREKNIKLGISGFNSLIFMYSKCGSVADAHRIFQTMGTR--DVVSFNTLIS 466
Query: 496 GLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVE 555
G A +G +K+ +E+ I+ + +T+IGVL+ C HAGL++ G+ FKS+++
Sbjct: 467 GFAANGHGKEAIKLVLTMEEEGIEPDHVTYIGVLTACSHAGLLNEGKNVFKSIQA----- 521
Query: 556 PDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKS 615
P + HY CMVDLLGRAG+L++A+ +I+SMPMK ++G+LL ASRIH V +GE AA
Sbjct: 522 PTVDHYACMVDLLGRAGELDEAKMLIQSMPMKPHAGVYGSLLNASRIHKRVGLGELAASK 581
Query: 616 LAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
L L+P + + VLLSNIYA GRWED +R+ M+ G+K+ G S V
Sbjct: 582 LFELEPQNLGNYVLLSNIYASFGRWEDVKRVREMMKKGGLKKSVGMSWV 630
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 125/475 (26%), Positives = 227/475 (47%), Gaps = 78/475 (16%)
Query: 37 IAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMI 96
+A G H+ + K G + FI+N+++++YAK G + A+++F+ + N MI
Sbjct: 109 LAGKSGNMFHAYVLKLGHIDDHFIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMI 168
Query: 97 SG-------------------------------YIRNDRLNDAREVFDKTPIKCCVSYTS 125
SG Y + L AR FD+ P + VS+ +
Sbjct: 169 SGCWKSGNETEAVVLFNMMPARNIITWTSMVTGYAKMGDLESARRYFDEMPERSVVSWNA 228
Query: 126 MIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLM 185
M +AQ +C +EAL +F M G+ P++ T ISS +G + ++ +
Sbjct: 229 MQSAYAQKECPKEALNLFHQMLEEGITPDDTTWVVTISSCSSIGDPTLADSILRMIDQKH 288
Query: 186 IDGFVIISTNLLNMYCVCSSLVEARSLFDEM-KERNIVSWNVMLNGFAKAGLVELARELF 244
I + T LL+M+ +L AR++FDE+ +RN V+WN+M++ + + G + LARELF
Sbjct: 289 IVLNSFVKTALLDMHAKFGNLEIARNIFDELGSQRNAVTWNIMISAYTRVGKLSLARELF 348
Query: 245 ERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAML-CDGIAPNDVMIVDLISACGRAMAF 303
+ +P +DVVSW +MI GY Q + ++ +++ M+ C I P++V I ++SACG A
Sbjct: 349 DNMPKRDVVSWNSMIAGYAQNGESAMSIELFKEMISCMDIQPDEVTIASVLSACGHIGAL 408
Query: 304 GEGLQIHSII----VKAGFDCYDFIQATIIHFYAACGRINLARLQFE-LGIKDHIASWNA 358
+ I+ +K G ++ ++I Y+ CG + A F+ +G +D + S+N
Sbjct: 409 KLSYWVLDIVREKNIKLGISGFN----SLIFMYSKCGSVADAHRIFQTMGTRD-VVSFNT 463
Query: 359 LIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPN 418
LI+GF NG ++A +L M+ + G++P+
Sbjct: 464 LISGFAANGHGKEAIKLVLTME-------------------------------EEGIEPD 492
Query: 419 EITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTA 473
+T + V A + +G L EG+ + + ++ + A ++D+ + G ++ A
Sbjct: 493 HVTYIGVLTACSHAGLLNEGKNVFKSIQAPTV----DHYACMVDLLGRAGELDEA 543
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 91/311 (29%), Positives = 157/311 (50%), Gaps = 46/311 (14%)
Query: 57 NTFIQNSLINLYAKCGLISQAKSMFDSC-STLDPVACNIMISGYIRNDRLNDAREVFDKT 115
N+F++ +L++++AK G + A+++FD S + V NIMIS Y R +L+ ARE+FD
Sbjct: 292 NSFVKTALLDMHAKFGNLEIARNIFDELGSQRNAVTWNIMISAYTRVGKLSLARELFDNM 351
Query: 116 PIKCCVSYTSMIMGFAQNDCWREALEVFRDM-RILGVIPNEVTLASVISSSVHLGGI--- 171
P + VS+ SMI G+AQN ++E+F++M + + P+EVT+ASV+S+ H+G +
Sbjct: 352 PKRDVVSWNSMIAGYAQNGESAMSIELFKEMISCMDIQPDEVTIASVLSACGHIGALKLS 411
Query: 172 -WECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNG 230
W ++ IKL I GF +L+ MY C S+ +A +F M R++VS+N +++G
Sbjct: 412 YWVLDIVREKNIKLGISGF----NSLIFMYSKCGSVADAHRIFQTMGTRDVVSFNTLISG 467
Query: 231 FAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMI 290
FA G EA+ + M +GI P+ V
Sbjct: 468 FAANG-------------------------------HGKEAIKLVLTMEEEGIEPDHVTY 496
Query: 291 VDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFE-LGI 349
+ +++AC A EG + I D Y A ++ G ++ A++ + + +
Sbjct: 497 IGVLTACSHAGLLNEGKNVFKSIQAPTVDHY----ACMVDLLGRAGELDEAKMLIQSMPM 552
Query: 350 KDHIASWNALI 360
K H + +L+
Sbjct: 553 KPHAGVYGSLL 563
>gi|87241257|gb|ABD33115.1| SAM (and some other nucleotide) binding motif; Methyltransferase
small; Tetratricopeptide-like helical [Medicago
truncatula]
Length = 971
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 174/490 (35%), Positives = 277/490 (56%), Gaps = 2/490 (0%)
Query: 175 RMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKA 234
RML G +K + ++ Y C L + E +I N +
Sbjct: 147 RMLLGGTLKPDNHTYPLLLKGCCGQYSSCLGLGVLGHVLKFGFECDIFVHNASITMLLSC 206
Query: 235 GLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLI 294
G + +A ++F + +D+V+W +MI G ++ EA+ +Y+ M + + PN++ ++ +I
Sbjct: 207 GELSVAYDVFNKSRVRDLVTWNSMITGCVKRGLAIEAIKIYKEMEAEKVRPNEITMIGMI 266
Query: 295 SACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIA 354
S+C + G + H I + G + + ++ Y CG + AR+ F+ + +
Sbjct: 267 SSCSQVQDLNLGKEFHCYIKEHGLEFTIPLTNALMDMYVKCGELLTARVLFDNMAQKTLV 326
Query: 355 SWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAG 414
SW ++ G+ R G ++ AR++ + ++ V W+A+ISG Q +Q AL LFH M
Sbjct: 327 SWTTMVLGYARFGFLDVAREILYKIPEKSVVPWNAIISGCVQAKQGKEALALFHEMQIRT 386
Query: 415 VKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAF 474
++P+++TMV+ A + G L G W H Y+ + ++++ L A++DMYAKCG+I A
Sbjct: 387 IEPDKVTMVNCLSACSQLGALDVGIWIHHYIERHKLSIDVALGTALVDMYAKCGNIARAL 446
Query: 475 EVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCH 534
+VF I R W A+ICGLA+HG+A L +S + I + ITF+GVLS CCH
Sbjct: 447 QVFEEIPQRNCLT--WTAVICGLALHGNAQDALSYFSKMIHIGIVPDEITFLGVLSACCH 504
Query: 535 AGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWG 594
GLV+ G +YF M S +NV P LKHY CMVDLLGRAG LE+AEE++++MPM AD + G
Sbjct: 505 GGLVEEGRKYFSEMSSKFNVSPKLKHYSCMVDLLGRAGHLEEAEELVKNMPMAADAAVLG 564
Query: 595 TLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCG 654
L A R++GNV++GER A L + P + VLL+++Y++A W++A S RK M D G
Sbjct: 565 ALFFACRVYGNVQIGERTAFKLLEIDPQDSGNYVLLASMYSEAKMWKEARSARKLMNDKG 624
Query: 655 MKRLPGFSGV 664
+++ PG S V
Sbjct: 625 VEKTPGCSLV 634
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 122/455 (26%), Positives = 205/455 (45%), Gaps = 77/455 (16%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
L+ C + G + + K G E + F+ N+ I + CG
Sbjct: 165 LKGCCGQYSSCLGLGVLGHVLKFGFECDIFVHNASITMLLSCG----------------- 207
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
L+ A +VF+K+ ++ V++ SMI G + EA++++++M
Sbjct: 208 --------------ELSVAYDVFNKSRVRDLVTWNSMITGCVKRGLAIEAIKIYKEMEAE 253
Query: 150 GVIPNEVTLASVISS-----SVHLGGIWECRML-HGLVIKLMIDGFVIISTN-LLNMYCV 202
V PNE+T+ +ISS ++LG + C + HGL F I TN L++MY
Sbjct: 254 KVRPNEITMIGMISSCSQVQDLNLGKEFHCYIKEHGL-------EFTIPLTNALMDMYVK 306
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
C L+ AR LFD M ++ +VSW M+ G+A+ G +++ARE+ +IP K VV W +I G
Sbjct: 307 CGELLTARVLFDNMAQKTLVSWTTMVLGYARFGFLDVAREILYKIPEKSVVPWNAIISGC 366
Query: 263 LQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD 322
+Q ++ EAL ++ M I P+ V +V+ +SAC + A G+ IH I +
Sbjct: 367 VQAKQGKEALALFHEMQIRTIEPDKVTMVNCLSACSQLGALDVGIWIHHYIERHKLSIDV 426
Query: 323 FIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKR 382
+ ++ YA CG I A FE + + +W A+I G +G +D
Sbjct: 427 ALGTALVDMYAKCGNIARALQVFEEIPQRNCLTWTAVICGLALHGNAQD----------- 475
Query: 383 DVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGR-WA 441
AL F M+ G+ P+EIT + V A G ++EGR +
Sbjct: 476 --------------------ALSYFSKMIHIGIVPDEITFLGVLSACCHGGLVEEGRKYF 515
Query: 442 HEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEV 476
E +++ + ++D+ + G + A E+
Sbjct: 516 SEMSSKFNVSPKLKHYSCMVDLLGRAGHLEEAEEL 550
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 106/456 (23%), Positives = 193/456 (42%), Gaps = 85/456 (18%)
Query: 196 LLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVEL-----AREL------F 244
LL++ C SLV+ + + +M VS ++ NGFA + LV ++EL
Sbjct: 60 LLSILERCKSLVQLKQIQAQM-----VSTGLIENGFAASRLVAFCALSESKELDYCTRIL 114
Query: 245 ERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDG-IAPNDVMIVDLISACGRAMAF 303
RI +V SW I GY++ + +Y+ ML G + P++ L+ C +
Sbjct: 115 YRIKELNVFSWNAAIRGYVESGDIEGGFMLYKRMLLGGTLKPDNHTYPLLLKGCCGQYSS 174
Query: 304 GEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGF 363
GL + ++K GF+C F+ I +CG +++A F + +WN++I G
Sbjct: 175 CLGLGVLGHVLKFGFECDIFVHNASITMLLSCGELSVAYDVFNKSRVRDLVTWNSMITGC 234
Query: 364 IRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMV 423
++ G+ +A +++ M+ V+PNEITM+
Sbjct: 235 VKRGLAIEAIKIYKEMEAEK-------------------------------VRPNEITMI 263
Query: 424 SVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDR 483
+ + + L G+ H Y+ + + L+ A++DMY KCG + TA +F ++ +
Sbjct: 264 GMISSCSQVQDLNLGKEFHCYIKEHGLEFTIPLTNALMDMYVKCGELLTARVLFDNMAQK 323
Query: 484 T-----------------------------TSVSPWNAIICGLAMHGDANLTLKIYSDLE 514
T SV PWNAII G L ++ +++
Sbjct: 324 TLVSWTTMVLGYARFGFLDVAREILYKIPEKSVVPWNAIISGCVQAKQGKEALALFHEMQ 383
Query: 515 KRNIKLNSITFIGVLSTCCHAGLVDLG---ERYFKSMKSVYNVEPDLKHYGCMVDLLGRA 571
R I+ + +T + LS C G +D+G Y + K + D+ +VD+ +
Sbjct: 384 IRTIEPDKVTMVNCLSACSQLGALDVGIWIHHYIERHK----LSIDVALGTALVDMYAKC 439
Query: 572 GQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVE 607
G + A +V +P + + + W ++ +HGN +
Sbjct: 440 GNIARALQVFEEIPQR-NCLTWTAVICGLALHGNAQ 474
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/361 (23%), Positives = 164/361 (45%), Gaps = 69/361 (19%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E+ ++ + CS ++ G++ H I + GLE + N+L+++Y KCG + A+ +FD
Sbjct: 259 EITMIGMISSCSQVQDLNLGKEFHCYIKEHGLEFTIPLTNALMDMYVKCGELLTARVLFD 318
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+ + V+ M+ GY R L+ ARE+ K P K V + ++I G Q +EAL +
Sbjct: 319 NMAQKTLVSWTTMVLGYARFGFLDVAREILYKIPEKSVVPWNAIISGCVQAKQGKEALAL 378
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLG----GIWECRMLHGLVIKLMIDGFVIISTNLLN 198
F +M+I + P++VT+ + +S+ LG GIW +H + + + V + T L++
Sbjct: 379 FHEMQIRTIEPDKVTMVNCLSACSQLGALDVGIW----IHHYIERHKLSIDVALGTALVD 434
Query: 199 MYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTM 258
MY C ++ A +F+E+ +RN ++W ++ G A G +
Sbjct: 435 MYAKCGNIARALQVFEEIPQRNCLTWTAVICGLALHGNAQ-------------------- 474
Query: 259 IDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGF 318
+AL+ + M+ GI P+++ + ++SAC H +V+
Sbjct: 475 -----------DALSYFSKMIHIGIVPDEITFLGVLSAC-----------CHGGLVEE-- 510
Query: 319 DCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNN 378
GR + + + + + ++ ++ R G +E+A +L N
Sbjct: 511 -----------------GRKYFSEMSSKFNVSPKLKHYSCMVDLLGRAGHLEEAEELVKN 553
Query: 379 M 379
M
Sbjct: 554 M 554
>gi|225456713|ref|XP_002267998.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 618
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 188/559 (33%), Positives = 310/559 (55%), Gaps = 37/559 (6%)
Query: 108 AREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVH 167
AR+VFD+ P + S I +++ EAL F M V T+ + S
Sbjct: 49 ARQVFDQIPHPDQGVHCSFITAYSRLSLNNEALRTFVSMHQNNVRIVCFTIPPIFKSCAS 108
Query: 168 LGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVM 227
L I + +H LVI+ V L+N Y + L A +FD + ++ +++N +
Sbjct: 109 LLAIDVGKQVHSLVIRYGFHSSVFCQNALINFYAKINDLGSAELIFDGILVKDTIAYNCL 168
Query: 228 LNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPND 287
++ ++++G V ARELF+++ + +VSW MI Y Q + +++ M + PN+
Sbjct: 169 ISAYSRSGEVLAARELFDKMRDRSIVSWNAMISCYAQNGDYHKGWIIFQRMQDEMCEPNE 228
Query: 288 VMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFEL 347
+ + ++S C + GL+I + + ++ Y CG
Sbjct: 229 ITLATVLSICAKLGDLEMGLRIKKLNDNKNLGSNMIVSTAMLEMYVKCG----------- 277
Query: 348 GIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELF 407
++D R +F++M +RDV +WSAMI+GYAQN + N ALELF
Sbjct: 278 --------------------AVDDGRLVFDHMARRDVVTWSAMIAGYAQNGRSNEALELF 317
Query: 408 HGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKC 467
M A +KPN++T+VSV A A G+++ G YV + + N +++A++ MY+KC
Sbjct: 318 ENMKSAQIKPNDVTLVSVLSACAQLGSVETGERIGSYVESRGLISNVYVASALLGMYSKC 377
Query: 468 GSINTAFEVFYHI--RDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITF 525
G+I A ++F + RD T WN++I GLA++G A + +Y+ +++ +K N+ITF
Sbjct: 378 GNIIKARQIFDKLPQRDNVT----WNSMIMGLAINGFAEDAIALYNRMKEIEVKPNNITF 433
Query: 526 IGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMP 585
+G+++ C HAG V+LG +F+SM+S +N+ P+++H+ C+VDL R+G+L DA E I M
Sbjct: 434 VGLMTACTHAGHVELGLEFFRSMRSDHNISPNIEHFACIVDLFCRSGRLIDAYEFICRME 493
Query: 586 MKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFS 645
++ +VVIWGTLL+ASRIH NVE+ E A K L L+P + + V+LSNIYA AGRW++A
Sbjct: 494 VEPNVVIWGTLLSASRIHLNVELAELAGKKLLELEPDNSGNYVILSNIYASAGRWQEALK 553
Query: 646 IRKEMRDCGMKRLPGFSGV 664
+RK M+D +++ +S V
Sbjct: 554 VRKLMKDKRVQKAAAYSWV 572
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 137/483 (28%), Positives = 233/483 (48%), Gaps = 76/483 (15%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
+ C++ +A+ G+Q+HSL+ + G S+ F QN+LIN YAK + A+ +FD D
Sbjct: 103 FKSCASLLAIDVGKQVHSLVIRYGFHSSVFCQNALINFYAKINDLGSAELIFDGILVKDT 162
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
+A N +IS Y R+ + ARE+FDK + VS+ +MI +AQN + + +F+ M+
Sbjct: 163 IAYNCLISAYSRSGEVLAARELFDKMRDRSIVSWNAMISCYAQNGDYHKGWIIFQRMQDE 222
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGF-----VIISTNLLNMYCVCS 204
PNE+TLA+V+S LG + GL IK + D +I+ST +L MY C
Sbjct: 223 MCEPNEITLATVLSICAKLGD-----LEMGLRIKKLNDNKNLGSNMIVSTAMLEMYVKCG 277
Query: 205 SLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQ 264
++ + R +FD M R++V+W+ M+ G+A+ G
Sbjct: 278 AVDDGRLVFDHMARRDVVTWSAMIAGYAQNG----------------------------- 308
Query: 265 VERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFI 324
R +EAL ++ M I PNDV +V ++SAC + + G +I S + G ++
Sbjct: 309 --RSNEALELFENMKSAQIKPNDVTLVSVLSACAQLGSVETGERIGSYVESRGLISNVYV 366
Query: 325 QATIIHFYAACGRINLARLQFE-LGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRD 383
+ ++ Y+ CG I AR F+ L +D++ +WN++I G NG EDA L+N M++ +
Sbjct: 367 ASALLGMYSKCGNIIKARQIFDKLPQRDNV-TWNSMIMGLAINGFAEDAIALYNRMKEIE 425
Query: 384 VYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG-RWAH 442
VKPN IT V + A +G ++ G +
Sbjct: 426 -------------------------------VKPNNITFVGLMTACTHAGHVELGLEFFR 454
Query: 443 EYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGD 502
+++I+ N A I+D++ + G + A+E + + +V W ++ +H +
Sbjct: 455 SMRSDHNISPNIEHFACIVDLFCRSGRLIDAYEFICRM-EVEPNVVIWGTLLSASRIHLN 513
Query: 503 ANL 505
L
Sbjct: 514 VEL 516
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 117/378 (30%), Positives = 200/378 (52%), Gaps = 12/378 (3%)
Query: 234 AGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDL 293
A ++ AR++F++IP D + I Y ++ +EAL + +M + + I +
Sbjct: 43 ASFIQYARQVFDQIPHPDQGVHCSFITAYSRLSLNNEALRTFVSMHQNNVRIVCFTIPPI 102
Query: 294 ISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFE-LGIKDH 352
+C +A G Q+HS++++ GF F Q +I+FYA + A L F+ + +KD
Sbjct: 103 FKSCASLLAIDVGKQVHSLVIRYGFHSSVFCQNALINFYAKINDLGSAELIFDGILVKDT 162
Query: 353 IASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVD 412
IA +N LI+ + R+G + AR+LF+ M+ R + SW+AMIS YAQN + +F M D
Sbjct: 163 IA-YNCLISAYSRSGEVLAARELFDKMRDRSIVSWNAMISCYAQNGDYHKGWIIFQRMQD 221
Query: 413 AGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINT 472
+PNEIT+ +V A G L+ G + N ++ N +S A+++MY KCG+++
Sbjct: 222 EMCEPNEITLATVLSICAKLGDLEMGLRIKKLNDNKNLGSNMIVSTAMLEMYVKCGAVDD 281
Query: 473 AFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTC 532
VF H+ R V W+A+I G A +G +N L+++ +++ IK N +T + VLS C
Sbjct: 282 GRLVFDHMARR--DVVTWSAMIAGYAQNGRSNEALELFENMKSAQIKPNDVTLVSVLSAC 339
Query: 533 CHAGLVDLGER---YFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKAD 589
G V+ GER Y +S + NV ++ + + G + A ++ +P + D
Sbjct: 340 AQLGSVETGERIGSYVESRGLISNVYVA----SALLGMYSKCGNIIKARQIFDKLPQR-D 394
Query: 590 VVIWGTLLAASRIHGNVE 607
V W +++ I+G E
Sbjct: 395 NVTWNSMIMGLAINGFAE 412
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 123/279 (44%), Gaps = 50/279 (17%)
Query: 11 NSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAK 70
N + A ++ +D + LVS L C+ +V G++I S + GL SN ++ ++L+ +Y+K
Sbjct: 319 NMKSAQIKPND--VTLVSVLSACAQLGSVETGERIGSYVESRGLISNVYVASALLGMYSK 376
Query: 71 CGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGF 130
CG I +A+ +FD K P + V++ SMIMG
Sbjct: 377 CGNIIKARQIFD-------------------------------KLPQRDNVTWNSMIMGL 405
Query: 131 AQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGI-------WECRMLHGLVIK 183
A N +A+ ++ M+ + V PN +T ++++ H G + R H I
Sbjct: 406 AINGFAEDAIALYNRMKEIEVKPNNITFVGLMTACTHAGHVELGLEFFRSMRSDHN--IS 463
Query: 184 LMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMK-ERNIVSWNVMLNG---FAKAGLVEL 239
I+ F I ++++C L++A M+ E N+V W +L+ L EL
Sbjct: 464 PNIEHFACI----VDLFCRSGRLIDAYEFICRMEVEPNVVIWGTLLSASRIHLNVELAEL 519
Query: 240 ARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAM 278
A + + + ++ + + Y R EAL + + M
Sbjct: 520 AGKKLLELEPDNSGNYVILSNIYASAGRWQEALKVRKLM 558
>gi|356502930|ref|XP_003520267.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Glycine max]
Length = 780
Score = 336 bits (862), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 196/620 (31%), Positives = 316/620 (50%), Gaps = 41/620 (6%)
Query: 53 GLESNTFIQNSLINLYAKCGLISQAKS----MFDSCSTLDPVACNIMISGYIRNDR--LN 106
G + N +++ +C Q K M + DP + +++ Y + L
Sbjct: 64 GEKGNEVESTNILEFIDQCTNTMQLKQIHAHMLRTSRFCDPYTASKLLTAYAISSCSCLI 123
Query: 107 DAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDM-RILGVIPNEVTLASVISSS 165
A+ VF++ P + ++I G+A + ++ +F M PN+ T + ++
Sbjct: 124 YAKNVFNQIPQPNLYCWNTLIRGYASSSDPTQSFLIFLHMLHSCSEFPNKFTFPFLFKAA 183
Query: 166 VHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWN 225
L + +LHG+VIK + + I +L+N Y
Sbjct: 184 SRLKVLHLGSVLHGMVIKASLSSDLFILNSLINFY------------------------- 218
Query: 226 VMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAP 285
+G +LA +F +P KDVVSW MI+ + +AL +++ M + P
Sbjct: 219 ------GSSGAPDLAHRVFTNMPGKDVVSWNAMINAFALGGLPDKALLLFQEMEMKDVKP 272
Query: 286 NDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQF 345
N + +V ++SAC + + G I S I GF + + ++ Y CG IN A+ F
Sbjct: 273 NVITMVSVLSACAKKIDLEFGRWICSYIENNGFTEHLILNNAMLDMYVKCGCINDAKDLF 332
Query: 346 ELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALE 405
+ I SW ++ G + G ++A +F+ M + +W+A+IS Y QN +P +AL
Sbjct: 333 NKMSEKDIVSWTTMLDGHAKLGNYDEAHCIFDAMPHKWTAAWNALISAYEQNGKPRVALS 392
Query: 406 LFHGM-VDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMY 464
LFH M + KP+E+T++ CA A G + G W H Y+ + I LN +L+ +++DMY
Sbjct: 393 LFHEMQLSKDAKPDEVTLICALCASAQLGAIDFGHWIHVYIKKHDINLNCHLATSLLDMY 452
Query: 465 AKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSIT 524
AKCG++N A EVF+ + + V W+A+I LAM+G L ++S + + IK N++T
Sbjct: 453 AKCGNLNKAMEVFHAVERKDVYV--WSAMIGALAMYGQGKAALDLFSSMLEAYIKPNAVT 510
Query: 525 FIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSM 584
F +L C HAGLV+ GE+ F+ M+ +Y + P ++HY C+VD+ GRAG LE A I M
Sbjct: 511 FTNILCACNHAGLVNEGEQLFEQMEPLYGIVPQIQHYVCVVDIFGRAGLLEKAASFIEKM 570
Query: 585 PMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAF 644
P+ +WG LL A HGNVE+ E A ++L L+P + + VLLSNIYA AG WE
Sbjct: 571 PIPPTAAVWGALLGACSRHGNVELAELAYQNLLELEPCNHGAFVLLSNIYAKAGDWEKVS 630
Query: 645 SIRKEMRDCGMKRLPGFSGV 664
++RK MRD +K+ P S +
Sbjct: 631 NLRKLMRDSDVKKEPWCSSI 650
>gi|297597850|ref|NP_001044616.2| Os01g0815900 [Oryza sativa Japonica Group]
gi|56785064|dbj|BAD82703.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|255673814|dbj|BAF06530.2| Os01g0815900 [Oryza sativa Japonica Group]
Length = 566
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 183/558 (32%), Positives = 306/558 (54%), Gaps = 35/558 (6%)
Query: 108 AREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVH 167
A +VFD+ + +I G AQ+D +A+ ++ + G++P+ +T ++ +
Sbjct: 40 AHKVFDQIEAPTTFLWNILIRGLAQSDAPADAIAFYKKAQGGGMVPDNLTFPFILKACAR 99
Query: 168 LGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVM 227
+ + E +H + KL + + +S +L+++Y C +L ARS+
Sbjct: 100 INALNEGEQMHNHITKLGLLSDIFVSNSLIHLYAACGNLCYARSV--------------- 144
Query: 228 LNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPND 287
F+ + KDVVSW ++I GY Q R + L +++ M +G+ +
Sbjct: 145 ----------------FDEMVVKDVVSWNSLICGYSQCNRFKDILALFKLMQNEGVKADK 188
Query: 288 VMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLA-RLQFE 346
V ++ ++SAC R + + I + ++ T++ ++ G++ A ++ F
Sbjct: 189 VTMIKVVSACTRLGDYSMADYMVRYIEDYCIEVDVYLGNTLVDYFGRRGQLQSAEKVFFN 248
Query: 347 LGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALEL 406
+ +++ I + NA+IA + + I AR++F+ + K+D+ SWS+MISGY+Q + ALE+
Sbjct: 249 MKVRN-IVTMNAMIAAYAKGQDIVSARKIFDQIPKKDLISWSSMISGYSQANHFSDALEI 307
Query: 407 FHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAK 466
F M A VKP+ I + SV + A G L G+W HEYV N+I + + ++IDMY K
Sbjct: 308 FRQMQRAKVKPDAIVIASVVSSCAHLGALDLGKWVHEYVRRNNIKADTIMENSLIDMYMK 367
Query: 467 CGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFI 526
CGS A +VF ++++ T WN+II GLA +G +L ++ + + N +TF+
Sbjct: 368 CGSAKEALQVFKEMKEKDTL--SWNSIIIGLANNGFEKESLNLFQAMLTEGFRPNGVTFL 425
Query: 527 GVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPM 586
GVL C +A LV+ G +F+SMK +Y++EP +KHYGC+VDLLGRAGQLE A I MP+
Sbjct: 426 GVLIACANAKLVEEGLDHFESMKRLYSLEPQMKHYGCVVDLLGRAGQLEKALRFITEMPI 485
Query: 587 KADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSI 646
D V+W LL + HG+V + E K L L+PS+ + LLSN YA A RW +A ++
Sbjct: 486 DPDPVVWRILLGSCNTHGDVAIAEIVTKKLNELEPSNSGNYTLLSNAYASAHRWSEAMNV 545
Query: 647 RKEMRDCGMKRLPGFSGV 664
R+ M D +++ PG S V
Sbjct: 546 RQCMADTDVRKSPGCSAV 563
Score = 178 bits (452), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 132/496 (26%), Positives = 226/496 (45%), Gaps = 75/496 (15%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
L+ C+ A+++G+Q+H+ I K GL S+ F+ NSLI+LYA CG
Sbjct: 94 LKACARINALNEGEQMHNHITKLGLLSDIFVSNSLIHLYAACG----------------- 136
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
L AR VFD+ +K VS+ S+I G++Q + +++ L +F+ M+
Sbjct: 137 --------------NLCYARSVFDEMVVKDVVSWNSLICGYSQCNRFKDILALFKLMQNE 182
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
GV ++VT+ V+S+ LG + + I+ V + L++ + L A
Sbjct: 183 GVKADKVTMIKVVSACTRLGDYSMADYMVRYIEDYCIEVDVYLGNTLVDYFGRRGQLQSA 242
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLS 269
+F MK RNIV+ N M+ +AK + AR++F++IP KD++SW +MI GY Q S
Sbjct: 243 EKVFFNMKVRNIVTMNAMIAAYAKGQDIVSARKIFDQIPKKDLISWSSMISGYSQANHFS 302
Query: 270 EALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATII 329
+AL ++R M + P+ ++I ++S+C A G +H + + ++ ++I
Sbjct: 303 DALEIFRQMQRAKVKPDAIVIASVVSSCAHLGALDLGKWVHEYVRRNNIKADTIMENSLI 362
Query: 330 HFYAACGRINLARLQF-ELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWS 388
Y CG A F E+ KD + SWN++I G NG ++
Sbjct: 363 DMYMKCGSAKEALQVFKEMKEKDTL-SWNSIIIGLANNGFEKE----------------- 404
Query: 389 AMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNN 448
+L LF M+ G +PN +T + V A A++ ++EG H +
Sbjct: 405 --------------SLNLFQAMLTEGFRPNGVTFLGVLIACANAKLVEEG-LDHFESMKR 449
Query: 449 SITLNDNLS--AAIIDMYAKCGSINTAFEVFYHIRDRTTSVSP--WNAIICGLAMHGD-- 502
+L + ++D+ + G + A I + P W ++ HGD
Sbjct: 450 LYSLEPQMKHYGCVVDLLGRAGQLEKALRF---ITEMPIDPDPVVWRILLGSCNTHGDVA 506
Query: 503 -ANLTLKIYSDLEKRN 517
A + K ++LE N
Sbjct: 507 IAEIVTKKLNELEPSN 522
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/421 (21%), Positives = 176/421 (41%), Gaps = 93/421 (22%)
Query: 206 LVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQV 265
LV A +FD+++ WN+++ G A Q
Sbjct: 37 LVFAHKVFDQIEAPTTFLWNILIRGLA-------------------------------QS 65
Query: 266 ERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQ 325
+ ++A+ Y+ G+ P+++ ++ AC R A EG Q+H+ I K G F+
Sbjct: 66 DAPADAIAFYKKAQGGGMVPDNLTFPFILKACARINALNEGEQMHNHITKLGLLSDIFVS 125
Query: 326 ATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVY 385
++IH YAACG + AR F+ + + SWN+LI G+ + +D LF MQ
Sbjct: 126 NSLIHLYAACGNLCYARSVFDEMVVKDVVSWNSLICGYSQCNRFKDILALFKLMQ----- 180
Query: 386 SWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYV 445
+ GVK +++TM+ V A G + Y+
Sbjct: 181 --------------------------NEGVKADKVTMIKVVSACTRLGDYSMADYMVRYI 214
Query: 446 LNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRT--------------------- 484
+ I ++ L ++D + + G + +A +VF++++ R
Sbjct: 215 EDYCIEVDVYLGNTLVDYFGRRGQLQSAEKVFFNMKVRNIVTMNAMIAAYAKGQDIVSAR 274
Query: 485 --------TSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAG 536
+ W+++I G + + L+I+ +++ +K ++I V+S+C H G
Sbjct: 275 KIFDQIPKKDLISWSSMISGYSQANHFSDALEIFRQMQRAKVKPDAIVIASVVSSCAHLG 334
Query: 537 LVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTL 596
+DLG+ + ++ N++ D ++D+ + G ++A +V + M K D + W ++
Sbjct: 335 ALDLGKWVHEYVRR-NNIKADTIMENSLIDMYMKCGSAKEALQVFKEMKEK-DTLSWNSI 392
Query: 597 L 597
+
Sbjct: 393 I 393
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/266 (21%), Positives = 113/266 (42%), Gaps = 48/266 (18%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+ + S + C+ A+ G+ +H + ++ ++++T ++NSLI++Y KCG AK
Sbjct: 321 IVIASVVSSCAHLGALDLGKWVHEYVRRNNIKADTIMENSLIDMYMKCG---SAK----- 372
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
+A +VF + K +S+ S+I+G A N +E+L +F
Sbjct: 373 -----------------------EALQVFKEMKEKDTLSWNSIIIGLANNGFEKESLNLF 409
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWE-------CRMLHGLVIKLMIDGFVIISTNL 196
+ M G PN VT V+ + + + E + L+ L ++ G V+
Sbjct: 410 QAMLTEGFRPNGVTFLGVLIACANAKLVEEGLDHFESMKRLYSLEPQMKHYGCVV----- 464
Query: 197 LNMYCVCSSLVEARSLFDEMK-ERNIVSWNVML---NGFAKAGLVELARELFERIPSKDV 252
++ L +A EM + + V W ++L N + E+ + + +
Sbjct: 465 -DLLGRAGQLEKALRFITEMPIDPDPVVWRILLGSCNTHGDVAIAEIVTKKLNELEPSNS 523
Query: 253 VSWGTMIDGYLQVERLSEALTMYRAM 278
++ + + Y R SEA+ + + M
Sbjct: 524 GNYTLLSNAYASAHRWSEAMNVRQCM 549
>gi|413942600|gb|AFW75249.1| hypothetical protein ZEAMMB73_388642 [Zea mays]
Length = 693
Score = 336 bits (861), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 197/636 (30%), Positives = 313/636 (49%), Gaps = 98/636 (15%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
L+ C+A ++ G+ +H+ + GL S + +L N+Y KC
Sbjct: 23 LKLCAARADLATGRAVHAQLEARGLASESIASTALANMYFKC------------------ 64
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
R DAR VFD+ P + V++ +++ G+A+N A+E M+
Sbjct: 65 -------------RRPADARRVFDRMPSRDRVAWNAVVAGYARNGLPSSAMEAVVRMQGE 111
Query: 150 --GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLV 207
G P+ VTL SV+ + + CR +H ++ +D V +ST +L+ YC C
Sbjct: 112 EGGERPDSVTLVSVLPACADARALHACREVHAFALRAGLDELVNVSTAVLDAYCKC---- 167
Query: 208 EARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVER 267
G VE AR +F+ +P ++ VSW MIDGY
Sbjct: 168 ---------------------------GAVEAARAVFDCMPVRNSVSWNAMIDGYADNGN 200
Query: 268 LSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQAT 327
+EA+ ++ M+ +G+ D ++ + ACG E ++H ++V+ G +
Sbjct: 201 ATEAMALFWRMVQEGVDVTDASVLAALQACGELGYLDEVRRVHELLVRVGLSSNVSVTNA 260
Query: 328 IIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNM-QKRDVYS 386
+I YA C R +L A Q+FN + K+ S
Sbjct: 261 LITTYAKCKRADL-------------------------------AAQVFNELGNKKTRIS 289
Query: 387 WSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVL 446
W+AMI G+ QNE P A LF M V+P+ T+VSV A+A + RW H Y +
Sbjct: 290 WNAMILGFTQNECPEDAERLFARMQLENVRPDSFTLVSVIPAVADISDPLQARWIHGYSI 349
Query: 447 NNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLT 506
+ + + + A+IDMY+KCG ++ A +F RDR V WNA+I G HG
Sbjct: 350 RHQLDQDVYVLTALIDMYSKCGRVSIARRLFDSARDR--HVITWNAMIHGYGSHGFGQAA 407
Query: 507 LKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVD 566
++++ +++ N TF+ VL+ C HAGLVD G++YF SMK Y +EP ++HYG MVD
Sbjct: 408 VELFEEMKGTGSLPNETTFLSVLAACSHAGLVDEGQKYFASMKKDYGLEPGMEHYGTMVD 467
Query: 567 LLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPS 626
LLGRAG+L++A I++MP++ + ++G +L A ++H NVE+ E +A+ + L P G
Sbjct: 468 LLGRAGKLDEAWSFIKNMPIEPGISVYGAMLGACKLHKNVELAEESAQIIFELGPEEGVY 527
Query: 627 RVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
VLL+NIYA+A W+D +R M G+++ PG+S
Sbjct: 528 HVLLANIYANASMWKDVARVRTAMEKKGLQKTPGWS 563
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 101/418 (24%), Positives = 190/418 (45%), Gaps = 42/418 (10%)
Query: 194 TNLLNMYCVCSSLVEARSLFDEMKERNIVSWNV----MLNGFAKAGLVELARELFERIPS 249
T LL + + L R++ +++ R + S ++ + N + K AR +F+R+PS
Sbjct: 20 TALLKLCAARADLATGRAVHAQLEARGLASESIASTALANMYFKCRRPADARRVFDRMPS 79
Query: 250 KDVVSWGTMIDGYLQVERLSEALTMYRAMLCD--GIAPNDVMIVDLISACGRAMAFGEGL 307
+D V+W ++ GY + S A+ M + G P+ V +V ++ AC A A
Sbjct: 80 RDRVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPACADARALHACR 139
Query: 308 QIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNG 367
++H+ ++AG D + ++ Y CG
Sbjct: 140 EVHAFALRAGLDELVNVSTAVLDAYCKCG------------------------------- 168
Query: 368 MIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFC 427
+E AR +F+ M R+ SW+AMI GYA N A+ LF MV GV + ++++
Sbjct: 169 AVEAARAVFDCMPVRNSVSWNAMIDGYADNGNATEAMALFWRMVQEGVDVTDASVLAALQ 228
Query: 428 AIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSV 487
A G L E R HE ++ ++ N +++ A+I YAKC + A +VF + ++ T +
Sbjct: 229 ACGELGYLDEVRRVHELLVRVGLSSNVSVTNALITTYAKCKRADLAAQVFNELGNKKTRI 288
Query: 488 SPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVD-LGERYFK 546
S WNA+I G + ++++ ++ N++ +S T + V+ A + D L R+
Sbjct: 289 S-WNAMILGFTQNECPEDAERLFARMQLENVRPDSFTLVSVIPAV--ADISDPLQARWIH 345
Query: 547 SMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHG 604
+ ++ D+ ++D+ + G++ A + S + V+ W ++ HG
Sbjct: 346 GYSIRHQLDQDVYVLTALIDMYSKCGRVSIARRLFDSARDR-HVITWNAMIHGYGSHG 402
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 106/485 (21%), Positives = 196/485 (40%), Gaps = 98/485 (20%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+ LVS L C+ A+ +++H+ ++GL+ + ++++ Y KCG + A
Sbjct: 120 VTLVSVLPACADARALHACREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAA------ 173
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
R VFD P++ VS+ +MI G+A N EA+ +F
Sbjct: 174 -------------------------RAVFDCMPVRNSVSWNAMIDGYADNGNATEAMALF 208
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
M GV + ++ + + + LG + E R +H L++++ + V ++ L+ Y C
Sbjct: 209 WRMVQEGVDVTDASVLAALQACGELGYLDEVRRVHELLVRVGLSSNVSVTNALITTYAKC 268
Query: 204 SSLVEARSLFDEM-KERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
A +F+E+ ++ +SWN M+ GF + E A LF R
Sbjct: 269 KRADLAAQVFNELGNKKTRISWNAMILGFTQNECPEDAERLFAR---------------- 312
Query: 263 LQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD 322
M + + P+ +V +I A + IH ++ D
Sbjct: 313 ---------------MQLENVRPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQDV 357
Query: 323 FIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKR 382
++ +I Y+ CGR+++AR F+ H+ +WNA+I G+ +G
Sbjct: 358 YVLTALIDMYSKCGRVSIARRLFDSARDRHVITWNAMIHGYGSHGF-------------- 403
Query: 383 DVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAH 442
G A A+ELF M G PNE T +SV A + +G + EG+ +
Sbjct: 404 ----------GQA-------AVELFEEMKGTGSLPNETTFLSVLAACSHAGLVDEGQ-KY 445
Query: 443 EYVLNNSITLNDNLS--AAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMH 500
+ L + ++D+ + G ++ A+ F +S + A++ +H
Sbjct: 446 FASMKKDYGLEPGMEHYGTMVDLLGRAGKLDEAWS-FIKNMPIEPGISVYGAMLGACKLH 504
Query: 501 GDANL 505
+ L
Sbjct: 505 KNVEL 509
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 90/369 (24%), Positives = 164/369 (44%), Gaps = 43/369 (11%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
+ ++++AL+ C + + +++H L+ + GL SN + N+LI YAKC A +F+
Sbjct: 220 DASVLAALQACGELGYLDEVRRVHELLVRVGLSSNVSVTNALITTYAKCKRADLAAQVFN 279
Query: 83 SCSTLDP-VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALE 141
++ N MI G+ QN+C +A
Sbjct: 280 ELGNKKTRISWNAMILGFT-------------------------------QNECPEDAER 308
Query: 142 VFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYC 201
+F M++ V P+ TL SVI + + + R +HG I+ +D V + T L++MY
Sbjct: 309 LFARMQLENVRPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQDVYVLTALIDMYS 368
Query: 202 VCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDG 261
C + AR LFD ++R++++WN M++G+ G + A ELFE + + T
Sbjct: 369 KCGRVSIARRLFDSARDRHVITWNAMIHGYGSHGFGQAAVELFEEMKGTGSLPNETTFLS 428
Query: 262 YL----QVERLSEALTMYRAMLCD-GIAPNDVMIVDLISACGRAMAFGEGLQ-IHSIIVK 315
L + E + +M D G+ P ++ GRA E I ++ ++
Sbjct: 429 VLAACSHAGLVDEGQKYFASMKKDYGLEPGMEHYGTMVDLLGRAGKLDEAWSFIKNMPIE 488
Query: 316 AGFDCYD-FIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNG-MIEDAR 373
G Y + A +H + A++ FELG ++ + ++ L+A N M +D
Sbjct: 489 PGISVYGAMLGACKLHKNVELAEES-AQIIFELGPEEGV--YHVLLANIYANASMWKDVA 545
Query: 374 QLFNNMQKR 382
++ M+K+
Sbjct: 546 RVRTAMEKK 554
Score = 42.7 bits (99), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 80/195 (41%), Gaps = 22/195 (11%)
Query: 421 TMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHI 480
T ++ A+ L GR H + + S A+ +MY KC A VF +
Sbjct: 18 TFTALLKLCAARADLATGRAVHAQLEARGLASESIASTALANMYFKCRRPADARRVFDRM 77
Query: 481 --RDRTTSVSPWNAIICGLAMHGDANLTLKIYSDL--EKRNIKLNSITFIGVLSTCCHAG 536
RDR WNA++ G A +G + ++ + E+ + +S+T + VL C A
Sbjct: 78 PSRDRVA----WNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPACADA- 132
Query: 537 LVDLGERYFKSMKSVY------NVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADV 590
R + + V+ ++ + ++D + G +E A V MP++ +
Sbjct: 133 ------RALHACREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMPVR-NS 185
Query: 591 VIWGTLLAASRIHGN 605
V W ++ +GN
Sbjct: 186 VSWNAMIDGYADNGN 200
>gi|297824945|ref|XP_002880355.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297326194|gb|EFH56614.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 599
Score = 336 bits (861), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 176/473 (37%), Positives = 276/473 (58%), Gaps = 7/473 (1%)
Query: 184 LMIDGF----VIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVEL 239
L I GF ++S +L+ MY C ++A +FD+M RN+ SWN M++GF K+G++
Sbjct: 72 LKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGFVKSGMLVR 131
Query: 240 ARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGR 299
AR +F+ +P +DVVSW TM+ GY Q L EAL ++ + GI N+ L++AC +
Sbjct: 132 ARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFFKELRRSGIKFNEFSFAGLLTACVK 191
Query: 300 AMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQF-ELGIKDHIASWNA 358
+ Q H ++ AGF + +II YA CG++ A+ F E+ +KD I W
Sbjct: 192 SRQLQLNQQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKD-IHIWTT 250
Query: 359 LIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPN 418
LI+G+ + G +E A +LF M +++ SW+A+I+GY + ++AL+LF M+ VKP
Sbjct: 251 LISGYAKLGDMEAADKLFREMPEKNPVSWTALIAGYVRQGSGDLALDLFRKMIAMRVKPE 310
Query: 419 EITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFY 478
+ T S CA AS +L+ G+ H Y++ ++ N +++++IDMY+K GS+ + VF
Sbjct: 311 QFTFSSCLCASASIASLRHGKQIHGYMIRTNVRPNAIVTSSLIDMYSKSGSLEASERVFR 370
Query: 479 HIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLV 538
D+ V WN +I LA HG + L++ D+ K + N T + +L+ C H+GLV
Sbjct: 371 ICYDKQDCVL-WNTMISALAQHGLGHKALQMLDDMIKFRVHPNRTTLVVILNACSHSGLV 429
Query: 539 DLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLA 598
+ G R+F+SM + + PD +HY C++DLLGRAG ++ I MP + D IW +L
Sbjct: 430 EEGVRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMSKIEEMPFEPDKHIWNAILG 489
Query: 599 ASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMR 651
RIHGN E+G++AA+ L L P +LLS+IYAD G+WE +R M+
Sbjct: 490 VCRIHGNEELGKKAAEELIKLDPESSAPYILLSSIYADHGKWELVEKLRGIMK 542
Score = 196 bits (498), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 142/538 (26%), Positives = 248/538 (46%), Gaps = 58/538 (10%)
Query: 26 LVSALRYCSAHIAVSQGQQIHSLIFKSGLE-SNTFIQNSLINLYAKCGLISQAKSMFDSC 84
L S L+ C ++ QG+ IH + +G + NT + N LI +Y KCG A +FD
Sbjct: 49 LASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQM 108
Query: 85 STLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFR 144
+ + N M+SG++++ L AR VFD P + VS+ +M++G+AQ+ EAL F+
Sbjct: 109 HLRNLYSWNNMVSGFVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFFK 168
Query: 145 DMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGF---VIISTNLLNMYC 201
++R G+ NE + A ++++ V + + HG V ++ GF V++S ++++ Y
Sbjct: 169 ELRRSGIKFNEFSFAGLLTACVKSRQLQLNQQAHGQV---LVAGFLSNVVLSCSIIDAYA 225
Query: 202 VCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDG 261
C + A+ FDEM ++I W +++G+AK G +E A +LF +P K+ VSW +I G
Sbjct: 226 KCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAADKLFREMPEKNPVSWTALIAG 285
Query: 262 YLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCY 321
Y++ AL ++R M+ + P + A + G QIH +++
Sbjct: 286 YVRQGSGDLALDLFRKMIAMRVKPEQFTFSSCLCASASIASLRHGKQIHGYMIRTNVRPN 345
Query: 322 DFIQATIIHFYAACGRINLARLQFELGI-KDHIASWNALIAGFIRNGMIEDARQLFNNMQ 380
+ +++I Y+ G + + F + K WN +I+ ++G+ A Q+ ++M
Sbjct: 346 AIVTSSLIDMYSKSGSLEASERVFRICYDKQDCVLWNTMISALAQHGLGHKALQMLDDMI 405
Query: 381 KRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG-R 439
K V+ PN T+V + A + SG ++EG R
Sbjct: 406 KFRVH-------------------------------PNRTTLVVILNACSHSGLVEEGVR 434
Query: 440 WAHEYVLNNSITLNDNLSAAIIDMYAKCGSINT--------AFEVFYHIRDRTTSVSPWN 491
W + + I + A +ID+ + G FE HI WN
Sbjct: 435 WFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMSKIEEMPFEPDKHI---------WN 485
Query: 492 AIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMK 549
AI+ +HG+ L K +L K + + +S +I + S G +L E+ MK
Sbjct: 486 AILGVCRIHGNEELGKKAAEELIKLDPE-SSAPYILLSSIYADHGKWELVEKLRGIMK 542
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 112/424 (26%), Positives = 197/424 (46%), Gaps = 52/424 (12%)
Query: 268 LSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD-FIQA 326
LS+A++ ++ GI ++ L+ CG + +G IH + GF + +
Sbjct: 27 LSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSN 86
Query: 327 TIIHFYAACGR-INLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVY 385
+I Y CG+ I+ ++ ++ +++ + SWN +++GF+++GM+ AR +F++M +RDV
Sbjct: 87 HLIGMYMKCGKPIDACKVFDQMHLRN-LYSWNNMVSGFVKSGMLVRARVVFDSMPERDVV 145
Query: 386 SWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYV 445
SW+ M+ GYAQ+ + AL F + +G+K NE + + A S L+ + AH V
Sbjct: 146 SWNTMVIGYAQDGNLHEALWFFKELRRSGIKFNEFSFAGLLTACVKSRQLQLNQQAHGQV 205
Query: 446 LNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDR-----TTSVS------------ 488
L N LS +IID YAKCG + +A F + + TT +S
Sbjct: 206 LVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAD 265
Query: 489 ------------PWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAG 536
W A+I G G +L L ++ + +K TF L C A
Sbjct: 266 KLFREMPEKNPVSWTALIAGYVRQGSGDLALDLFRKMIAMRVKPEQFTFSSCL--CASAS 323
Query: 537 LVDLGERYFKSMKSVY---NVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIW 593
+ L R+ K + NV P+ ++D+ ++G LE +E V R K D V+W
Sbjct: 324 IASL--RHGKQIHGYMIRTNVRPNAIVTSSLIDMYSKSGSLEASERVFRICYDKQDCVLW 381
Query: 594 GTLLAASRIHGNVEVGERAAKSLAGL-----QPSHGPSRVLL-----SNIYADAGRWEDA 643
T+++A HG +G +A + L + P+ V+L S + + RW ++
Sbjct: 382 NTMISALAQHG---LGHKALQMLDDMIKFRVHPNRTTLVVILNACSHSGLVEEGVRWFES 438
Query: 644 FSIR 647
+++
Sbjct: 439 MTVQ 442
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/373 (25%), Positives = 169/373 (45%), Gaps = 16/373 (4%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E + L C + QQ H + +G SN + S+I+ YAKCG + AK FD
Sbjct: 179 EFSFAGLLTACVKSRQLQLNQQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFD 238
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+ D +ISGY + + A ++F + P K VS+T++I G+ + AL++
Sbjct: 239 EMTVKDIHIWTTLISGYAKLGDMEAADKLFREMPEKNPVSWTALIAGYVRQGSGDLALDL 298
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
FR M + V P + T +S + +S + + + +HG +I+ + I++++L++MY
Sbjct: 299 FRKMIAMRVKPEQFTFSSCLCASASIASLRHGKQIHGYMIRTNVRPNAIVTSSLIDMYSK 358
Query: 203 CSSLVEARSLFDE-MKERNIVSWNVMLNGFAKAGLVELARELFERI------PSKDVVSW 255
SL + +F +++ V WN M++ A+ GL A ++ + + P++ +
Sbjct: 359 SGSLEASERVFRICYDKQDCVLWNTMISALAQHGLGHKALQMLDDMIKFRVHPNRTTLV- 417
Query: 256 GTMIDGYLQVERLSEALTMYRAMLCD-GIAPNDVMIVDLISACGRAMAFGEGLQIHSIIV 314
+++ + E + + +M GI P+ LI GRA F E + S I
Sbjct: 418 -VILNACSHSGLVEEGVRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKE---LMSKIE 473
Query: 315 KAGFDCYDFIQATIIHFYAACGRINLARLQFELGIK---DHIASWNALIAGFIRNGMIED 371
+ F+ I I+ G L + E IK + A + L + + +G E
Sbjct: 474 EMPFEPDKHIWNAILGVCRIHGNEELGKKAAEELIKLDPESSAPYILLSSIYADHGKWEL 533
Query: 372 ARQLFNNMQKRDV 384
+L M+KR V
Sbjct: 534 VEKLRGIMKKRRV 546
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/275 (21%), Positives = 118/275 (42%), Gaps = 32/275 (11%)
Query: 377 NNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLK 436
+N +KR + +++S +A + + A+ + G++ + S+ + +LK
Sbjct: 4 SNPRKRPICVARSLLSRHATKAELSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLK 63
Query: 437 EGRWAHEYV-LNNSITLNDNLSAAIIDMYAKCGSINTAFEVF--YHIRDRTT-------- 485
+G+W H ++ + N LS +I MY KCG A +VF H+R+ +
Sbjct: 64 QGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGF 123
Query: 486 -------------------SVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFI 526
V WN ++ G A G+ + L + +L + IK N +F
Sbjct: 124 VKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFFKELRRSGIKFNEFSFA 183
Query: 527 GVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPM 586
G+L+ C + + L ++ + V ++ ++D + GQ+E A+ M +
Sbjct: 184 GLLTACVKSRQLQLNQQAHGQV-LVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTV 242
Query: 587 KADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQP 621
K D+ IW TL++ G++E ++ + + P
Sbjct: 243 K-DIHIWTTLISGYAKLGDMEAADKLFREMPEKNP 276
>gi|15226463|ref|NP_179705.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206523|sp|Q9SKQ4.1|PP167_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g21090
gi|4803934|gb|AAD29807.1| unknown protein [Arabidopsis thaliana]
gi|330252028|gb|AEC07122.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 597
Score = 336 bits (861), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 178/473 (37%), Positives = 274/473 (57%), Gaps = 7/473 (1%)
Query: 184 LMIDGF----VIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVEL 239
L I GF ++S +L+ MY C ++A +FD+M RN+ SWN M++G+ K+G++
Sbjct: 72 LKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVR 131
Query: 240 ARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGR 299
AR +F+ +P +DVVSW TM+ GY Q L EAL Y+ GI N+ L++AC +
Sbjct: 132 ARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVK 191
Query: 300 AMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQF-ELGIKDHIASWNA 358
+ Q H ++ AGF + +II YA CG++ A+ F E+ +KD I W
Sbjct: 192 SRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKD-IHIWTT 250
Query: 359 LIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPN 418
LI+G+ + G +E A +LF M +++ SW+A+I+GY + N AL+LF M+ GVKP
Sbjct: 251 LISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPE 310
Query: 419 EITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFY 478
+ T S CA AS +L+ G+ H Y++ ++ N + +++IDMY+K GS+ + VF
Sbjct: 311 QFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFR 370
Query: 479 HIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLV 538
D+ V WN +I LA HG + L++ D+ K ++ N T + +L+ C H+GLV
Sbjct: 371 ICDDKHDCVF-WNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLV 429
Query: 539 DLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLA 598
+ G R+F+SM + + PD +HY C++DLLGRAG ++ I MP + D IW +L
Sbjct: 430 EEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFEPDKHIWNAILG 489
Query: 599 ASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMR 651
RIHGN E+G++AA L L P +LLS+IYAD G+WE +R M+
Sbjct: 490 VCRIHGNEELGKKAADELIKLDPESSAPYILLSSIYADHGKWELVEKLRGVMK 542
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 142/539 (26%), Positives = 248/539 (46%), Gaps = 58/539 (10%)
Query: 26 LVSALRYCSAHIAVSQGQQIHSLIFKSGLE-SNTFIQNSLINLYAKCGLISQAKSMFDSC 84
L S L+ C ++ QG+ IH + +G + NT + N LI +Y KCG A +FD
Sbjct: 49 LASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQM 108
Query: 85 STLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFR 144
+ + N M+SGY+++ L AR VFD P + VS+ +M++G+AQ+ EAL ++
Sbjct: 109 HLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYK 168
Query: 145 DMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGF---VIISTNLLNMYC 201
+ R G+ NE + A ++++ V + R HG V ++ GF V++S ++++ Y
Sbjct: 169 EFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQV---LVAGFLSNVVLSCSIIDAYA 225
Query: 202 VCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDG 261
C + A+ FDEM ++I W +++G+AK G +E A +LF +P K+ VSW +I G
Sbjct: 226 KCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAG 285
Query: 262 YLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCY 321
Y++ + AL ++R M+ G+ P + A + G +IH +++
Sbjct: 286 YVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPN 345
Query: 322 DFIQATIIHFYAACGRINLARLQFELGIKDH-IASWNALIAGFIRNGMIEDARQLFNNMQ 380
+ +++I Y+ G + + F + H WN +I+ ++G+
Sbjct: 346 AIVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGL------------ 393
Query: 381 KRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG-R 439
+ AL + M+ V+PN T+V + A + SG ++EG R
Sbjct: 394 -------------------GHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLR 434
Query: 440 WAHEYVLNNSITLNDNLSAAIIDMYAKCGSINT--------AFEVFYHIRDRTTSVSPWN 491
W + + I + A +ID+ + G FE HI WN
Sbjct: 435 WFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFEPDKHI---------WN 485
Query: 492 AIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKS 550
AI+ +HG+ L K +L K + + +S +I + S G +L E+ MK
Sbjct: 486 AILGVCRIHGNEELGKKAADELIKLDPE-SSAPYILLSSIYADHGKWELVEKLRGVMKK 543
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 112/424 (26%), Positives = 195/424 (45%), Gaps = 52/424 (12%)
Query: 268 LSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD-FIQA 326
LS+A++ ++ GI ++ L+ CG + +G IH + GF + +
Sbjct: 27 LSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSN 86
Query: 327 TIIHFYAACGR-INLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVY 385
+I Y CG+ I+ ++ ++ +++ + SWN +++G++++GM+ AR +F++M +RDV
Sbjct: 87 HLIGMYMKCGKPIDACKVFDQMHLRN-LYSWNNMVSGYVKSGMLVRARVVFDSMPERDVV 145
Query: 386 SWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYV 445
SW+ M+ GYAQ+ + AL + +G+K NE + + A S L+ R AH V
Sbjct: 146 SWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQV 205
Query: 446 LNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDR-----TTSVS------------ 488
L N LS +IID YAKCG + +A F + + TT +S
Sbjct: 206 LVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAE 265
Query: 489 ------------PWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAG 536
W A+I G G N L ++ + +K TF L C A
Sbjct: 266 KLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCL--CASAS 323
Query: 537 LVDLGERYFKSMKSVY---NVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIW 593
+ L R+ K + NV P+ ++D+ ++G LE +E V R K D V W
Sbjct: 324 IASL--RHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDCVFW 381
Query: 594 GTLLAASRIHGNVEVGERAAKSLAGL-----QPSHGPSRVLL-----SNIYADAGRWEDA 643
T+++A HG +G +A + L + QP+ V+L S + + RW ++
Sbjct: 382 NTMISALAQHG---LGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFES 438
Query: 644 FSIR 647
+++
Sbjct: 439 MTVQ 442
Score = 112 bits (279), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 136/291 (46%), Gaps = 10/291 (3%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E + L C + +Q H + +G SN + S+I+ YAKCG + AK FD
Sbjct: 179 EFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFD 238
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+ D +ISGY + + A ++F + P K VS+T++I G+ + AL++
Sbjct: 239 EMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDL 298
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
FR M LGV P + T +S + +S + + + +HG +I+ + I+ ++L++MY
Sbjct: 299 FRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSK 358
Query: 203 CSSLVEARSLFDEMKER-NIVSWNVMLNGFAKAGLVELAREL------FERIPSKDVVSW 255
SL + +F ++ + V WN M++ A+ GL A + F P++ +
Sbjct: 359 SGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLV- 417
Query: 256 GTMIDGYLQVERLSEALTMYRAMLCD-GIAPNDVMIVDLISACGRAMAFGE 305
+++ + E L + +M GI P+ LI GRA F E
Sbjct: 418 -VILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKE 467
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 127/311 (40%), Gaps = 37/311 (11%)
Query: 377 NNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLK 436
+N +KR + + +S +A + + A+ + G++ + S+ + +LK
Sbjct: 4 SNPRKRPICVAQSFLSKHATKAELSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLK 63
Query: 437 EGRWAHEYV-LNNSITLNDNLSAAIIDMYAKCGSINTAFEVF--YHIRDRTT-------- 485
+G+W H ++ + N LS +I MY KCG A +VF H+R+ +
Sbjct: 64 QGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGY 123
Query: 486 -------------------SVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFI 526
V WN ++ G A G+ + L Y + + IK N +F
Sbjct: 124 VKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFA 183
Query: 527 GVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPM 586
G+L+ C + + L R V ++ ++D + GQ+E A+ M +
Sbjct: 184 GLLTACVKSRQLQLN-RQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTV 242
Query: 587 KADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGP-SRVLLSNIYADAGRWEDAFS 645
K D+ IW TL++ G++E AA+ L P P S L Y G A
Sbjct: 243 K-DIHIWTTLISGYAKLGDME----AAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALD 297
Query: 646 IRKEMRDCGMK 656
+ ++M G+K
Sbjct: 298 LFRKMIALGVK 308
>gi|357118962|ref|XP_003561216.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 900
Score = 336 bits (861), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 196/638 (30%), Positives = 310/638 (48%), Gaps = 96/638 (15%)
Query: 26 LVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCS 85
S L+ C+A ++ G+ +H+ + GL +L N+YAKC
Sbjct: 228 FTSLLKLCAARADLATGRAVHAQLAARGLSPEALAATALANMYAKC-------------- 273
Query: 86 TLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALE-VFR 144
R DAR VFD+ P + V++ +++ G+A+N A+ V R
Sbjct: 274 -----------------RRPGDARRVFDRMPARDRVAWNALVAGYARNGLAEAAVGMVVR 316
Query: 145 DMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCS 204
G P+ VTL SV+ + + CR +H ++ D V +ST +L++YC C
Sbjct: 317 MQEEDGERPDAVTLVSVLPACADAQALGACREVHAFAVRGGFDEQVNVSTAILDVYCKC- 375
Query: 205 SLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQ 264
G V+ AR++F+ + ++ VSW MI GY +
Sbjct: 376 ------------------------------GAVDSARKVFDGMQDRNSVSWNAMIKGYAE 405
Query: 265 VERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFI 324
+EAL +++ M+ +G+ DV ++ + ACG EG ++H ++V+ G + +
Sbjct: 406 NGDATEALALFKRMVGEGVDVTDVSVLAALHACGELGFLDEGRRVHELLVRIGLESNVNV 465
Query: 325 QATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDV 384
+I Y C R +L A Q+F+ + +
Sbjct: 466 MNALITMYCKCKRTDL-------------------------------AAQVFDELGYKTR 494
Query: 385 YSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEY 444
SW+AMI G QN A+ LF M VKP+ T+VS+ A+A + RW H Y
Sbjct: 495 VSWNAMILGCTQNGSSEDAVRLFSRMQLENVKPDSFTLVSIIPALADISDPLQARWIHGY 554
Query: 445 VLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDAN 504
+ + + + A+IDMYAKCG ++ A +F RDR V WNA+I G HG
Sbjct: 555 SIRLHLDQDVYVLTALIDMYAKCGRVSIARSLFNSARDR--HVITWNAMIHGYGSHGSGK 612
Query: 505 LTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCM 564
+ ++++ +++ N TF+ VLS C HAGLVD G+ YF SMK Y +EP ++HYG M
Sbjct: 613 VAVELFEEMKSSGKVPNETTFLSVLSACSHAGLVDEGQEYFSSMKEDYGLEPGMEHYGTM 672
Query: 565 VDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHG 624
VDLLGRAG+L +A I+ MPM+ + ++G +L A ++H NVE+ E +A+ + L+P G
Sbjct: 673 VDLLGRAGKLHEAWSFIQKMPMEPGISVYGAMLGACKLHKNVELAEESAQRIFELEPEEG 732
Query: 625 PSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
VLL+NIYA+A W+D +R M G+++ PG+S
Sbjct: 733 VYHVLLANIYANASLWKDVARVRTAMEKKGLQKTPGWS 770
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 115/498 (23%), Positives = 202/498 (40%), Gaps = 105/498 (21%)
Query: 16 NLQNSDYE----LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKC 71
+Q D E + LVS L C+ A+ +++H+ + G + + +++++Y KC
Sbjct: 316 RMQEEDGERPDAVTLVSVLPACADAQALGACREVHAFAVRGGFDEQVNVSTAILDVYCKC 375
Query: 72 GLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFA 131
G + A+ +FD + V+ N MI GY A
Sbjct: 376 GAVDSARKVFDGMQDRNSVSWNAMIKGY-------------------------------A 404
Query: 132 QNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVI 191
+N EAL +F+ M GV +V++ + + + LG + E R +H L++++ ++ V
Sbjct: 405 ENGDATEALALFKRMVGEGVDVTDVSVLAALHACGELGFLDEGRRVHELLVRIGLESNVN 464
Query: 192 ISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKD 251
+ L+ MYC C A +FDE+ + VSWN M+ G + G E A LF R
Sbjct: 465 VMNALITMYCKCKRTDLAAQVFDELGYKTRVSWNAMILGCTQNGSSEDAVRLFSR----- 519
Query: 252 VVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHS 311
M + + P+ +V +I A + IH
Sbjct: 520 --------------------------MQLENVKPDSFTLVSIIPALADISDPLQARWIHG 553
Query: 312 IIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIED 371
++ D ++ +I YA CGR+++AR F H+ +WNA+I G+ +G
Sbjct: 554 YSIRLHLDQDVYVLTALIDMYAKCGRVSIARSLFNSARDRHVITWNAMIHGYGSHG---- 609
Query: 372 ARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIAS 431
SG +A+ELF M +G PNE T +SV A +
Sbjct: 610 --------------------SG-------KVAVELFEEMKSSGKVPNETTFLSVLSACSH 642
Query: 432 SGTLKEGRWAHEYV--LNNSITLNDNLS--AAIIDMYAKCGSINTAFEVFYHIRDRTTSV 487
+G + EG+ EY + L + ++D+ + G ++ A+ F +
Sbjct: 643 AGLVDEGQ---EYFSSMKEDYGLEPGMEHYGTMVDLLGRAGKLHEAWS-FIQKMPMEPGI 698
Query: 488 SPWNAIICGLAMHGDANL 505
S + A++ +H + L
Sbjct: 699 SVYGAMLGACKLHKNVEL 716
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 61/137 (44%), Gaps = 8/137 (5%)
Query: 403 ALELFHGMVDA-GVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAII 461
AL F M A G P T S+ A+ L GR H + ++ + A+
Sbjct: 208 ALAAFAAMSPASGSGPVLRTFTSLLKLCAARADLATGRAVHAQLAARGLSPEALAATALA 267
Query: 462 DMYAKCGSINTAFEVFYHI--RDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRN-I 518
+MYAKC A VF + RDR WNA++ G A +G A + + +++ +
Sbjct: 268 NMYAKCRRPGDARRVFDRMPARDRVA----WNALVAGYARNGLAEAAVGMVVRMQEEDGE 323
Query: 519 KLNSITFIGVLSTCCHA 535
+ +++T + VL C A
Sbjct: 324 RPDAVTLVSVLPACADA 340
>gi|9294596|dbj|BAB02877.1| unnamed protein product [Arabidopsis thaliana]
Length = 695
Score = 335 bits (860), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 203/665 (30%), Positives = 338/665 (50%), Gaps = 71/665 (10%)
Query: 1 TPLDHFHSVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFI 60
+ L F ++ S ++DY +S L C Q +Q+HS G+ N
Sbjct: 13 SELSIFKALLMSTITESISNDYS-RFISILGVCKT---TDQFKQLHSQSITRGVAPNPTF 68
Query: 61 QNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCC 120
Q L + CS L G++ + A ++F K P
Sbjct: 69 QKKLFVFW---------------CSRL---------GGHV-----SYAYKLFVKIPEPDV 99
Query: 121 VSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWEC-RMLHG 179
V + +MI G+++ DC E + ++ +M GV P+ T +++ GG C + LH
Sbjct: 100 VVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHC 159
Query: 180 LVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVEL 239
V+K + + + L+ MY +C GL+++
Sbjct: 160 HVVKFGLGSNLYVQNALVKMYSLC-------------------------------GLMDM 188
Query: 240 ARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGR 299
AR +F+R +DV SW MI GY +++ E++ + M + ++P V ++ ++SAC +
Sbjct: 189 ARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSK 248
Query: 300 AMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNAL 359
++H + + + ++ +++ YAACG +++A F + SW ++
Sbjct: 249 VKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSI 308
Query: 360 IAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNE 419
+ G++ G ++ AR F+ M RD SW+ MI GY + N +LE+F M AG+ P+E
Sbjct: 309 VKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDE 368
Query: 420 ITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYH 479
TMVSV A A G+L+ G W Y+ N I + + A+IDMY KCG A +VF+
Sbjct: 369 FTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHD 428
Query: 480 I--RDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGL 537
+ RD+ T W A++ GLA +G +K++ ++ +I+ + IT++GVLS C H+G+
Sbjct: 429 MDQRDKFT----WTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGM 484
Query: 538 VDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLL 597
VD ++F M+S + +EP L HYGCMVD+LGRAG +++A E++R MPM + ++WG LL
Sbjct: 485 VDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALL 544
Query: 598 AASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKR 657
ASR+H + + E AAK + L+P +G LL NIYA RW+D +R+++ D +K+
Sbjct: 545 GASRLHNDEPMAELAAKKILELEPDNGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKK 604
Query: 658 LPGFS 662
PGFS
Sbjct: 605 TPGFS 609
>gi|15233234|ref|NP_188214.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546758|sp|Q9LSB8.2|PP235_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g15930
gi|332642227|gb|AEE75748.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 687
Score = 335 bits (859), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 203/665 (30%), Positives = 338/665 (50%), Gaps = 71/665 (10%)
Query: 1 TPLDHFHSVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFI 60
+ L F ++ S ++DY +S L C Q +Q+HS G+ N
Sbjct: 13 SELSIFKALLMSTITESISNDYS-RFISILGVCKT---TDQFKQLHSQSITRGVAPNPTF 68
Query: 61 QNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCC 120
Q L + CS L G++ + A ++F K P
Sbjct: 69 QKKLFVFW---------------CSRL---------GGHV-----SYAYKLFVKIPEPDV 99
Query: 121 VSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWEC-RMLHG 179
V + +MI G+++ DC E + ++ +M GV P+ T +++ GG C + LH
Sbjct: 100 VVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHC 159
Query: 180 LVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVEL 239
V+K + + + L+ MY +C GL+++
Sbjct: 160 HVVKFGLGSNLYVQNALVKMYSLC-------------------------------GLMDM 188
Query: 240 ARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGR 299
AR +F+R +DV SW MI GY +++ E++ + M + ++P V ++ ++SAC +
Sbjct: 189 ARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSK 248
Query: 300 AMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNAL 359
++H + + + ++ +++ YAACG +++A F + SW ++
Sbjct: 249 VKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSI 308
Query: 360 IAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNE 419
+ G++ G ++ AR F+ M RD SW+ MI GY + N +LE+F M AG+ P+E
Sbjct: 309 VKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDE 368
Query: 420 ITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYH 479
TMVSV A A G+L+ G W Y+ N I + + A+IDMY KCG A +VF+
Sbjct: 369 FTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHD 428
Query: 480 I--RDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGL 537
+ RD+ T W A++ GLA +G +K++ ++ +I+ + IT++GVLS C H+G+
Sbjct: 429 MDQRDKFT----WTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGM 484
Query: 538 VDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLL 597
VD ++F M+S + +EP L HYGCMVD+LGRAG +++A E++R MPM + ++WG LL
Sbjct: 485 VDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALL 544
Query: 598 AASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKR 657
ASR+H + + E AAK + L+P +G LL NIYA RW+D +R+++ D +K+
Sbjct: 545 GASRLHNDEPMAELAAKKILELEPDNGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKK 604
Query: 658 LPGFS 662
PGFS
Sbjct: 605 TPGFS 609
>gi|15227619|ref|NP_180537.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75100656|sp|O82380.1|PP175_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g29760, chloroplastic; Flags: Precursor
gi|3582328|gb|AAC35225.1| hypothetical protein [Arabidopsis thaliana]
gi|330253207|gb|AEC08301.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 738
Score = 335 bits (859), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 184/562 (32%), Positives = 300/562 (53%), Gaps = 35/562 (6%)
Query: 105 LNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDM-RILGVIPNEVTLASVIS 163
L AR+VFD+ P ++ ++I +A ++ F DM PN+ T +I
Sbjct: 80 LEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIK 139
Query: 164 SSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVS 223
++ + + + LHG+ +K + V ++ +L++ Y C L A +F +KE
Sbjct: 140 AAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKE----- 194
Query: 224 WNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGI 283
KDVVSW +MI+G++Q +AL +++ M + +
Sbjct: 195 --------------------------KDVVSWNSMINGFVQKGSPDKALELFKKMESEDV 228
Query: 284 APNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARL 343
+ V +V ++SAC + G Q+ S I + + + ++ Y CG I A+
Sbjct: 229 KASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKR 288
Query: 344 QFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMA 403
F+ + +W ++ G+ + E AR++ N+M ++D+ +W+A+IS Y QN +PN A
Sbjct: 289 LFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEA 348
Query: 404 LELFHGM-VDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIID 462
L +FH + + +K N+IT+VS A A G L+ GRW H Y+ + I +N ++++A+I
Sbjct: 349 LIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIH 408
Query: 463 MYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNS 522
MY+KCG + + EVF + R V W+A+I GLAMHG N + ++ +++ N+K N
Sbjct: 409 MYSKCGDLEKSREVFNSVEKRDVFV--WSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNG 466
Query: 523 ITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIR 582
+TF V C H GLVD E F M+S Y + P+ KHY C+VD+LGR+G LE A + I
Sbjct: 467 VTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIE 526
Query: 583 SMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWED 642
+MP+ +WG LL A +IH N+ + E A L L+P + + VLLSNIYA G+WE+
Sbjct: 527 AMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWEN 586
Query: 643 AFSIRKEMRDCGMKRLPGFSGV 664
+RK MR G+K+ PG S +
Sbjct: 587 VSELRKHMRVTGLKKEPGCSSI 608
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 135/485 (27%), Positives = 223/485 (45%), Gaps = 68/485 (14%)
Query: 38 AVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMIS 97
++S GQ +H + KS + S+ F+ NSLI+ Y CG
Sbjct: 146 SLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCG------------------------- 180
Query: 98 GYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVT 157
L+ A +VF K VS+ SMI GF Q +ALE+F+ M V + VT
Sbjct: 181 ------DLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVT 234
Query: 158 LASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMK 217
+ V+S+ + + R + + + ++ + ++ +L+MY C S+ +A+ LFD M+
Sbjct: 235 MVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAME 294
Query: 218 ERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRA 277
E++ V+W ML+G+A + E ARE+ +P KD+V+W +I Y Q + +EAL ++
Sbjct: 295 EKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHE 354
Query: 278 M-LCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACG 336
+ L + N + +V +SAC + A G IHS I K G + + +IH Y+ CG
Sbjct: 355 LQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCG 414
Query: 337 RINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQ 396
+ +R F K + W+A+I G +G
Sbjct: 415 DLEKSREVFNSVEKRDVFVWSAMIGGLAMHG---------------------------CG 447
Query: 397 NEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGR-WAHEYVLNNSITLNDN 455
NE A+++F+ M +A VKPN +T +VFCA + +G + E H+ N I +
Sbjct: 448 NE----AVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEK 503
Query: 456 LSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYS---D 512
A I+D+ + G + A + F S S W A++ +H + NL + +
Sbjct: 504 HYACIVDVLGRSGYLEKAVK-FIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLE 562
Query: 513 LEKRN 517
LE RN
Sbjct: 563 LEPRN 567
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 114/461 (24%), Positives = 197/461 (42%), Gaps = 76/461 (16%)
Query: 231 FAKAGL-----VELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDG-IA 284
FA A L +E AR++F+ IP + +W T+I Y ++ + M+ +
Sbjct: 69 FAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCY 128
Query: 285 PNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQ 344
PN LI A + G +H + VK+ F+ ++IH Y +CG ++ A
Sbjct: 129 PNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKV 188
Query: 345 FELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMAL 404
F + + SWN++I GF++ G + A +LF M+ D
Sbjct: 189 FTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESED--------------------- 227
Query: 405 ELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMY 464
VK + +TMV V A A L+ GR Y+ N + +N L+ A++DMY
Sbjct: 228 ----------VKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMY 277
Query: 465 AKCGSINTAFEVFYHIRDR-----------------------------TTSVSPWNAIIC 495
KCGSI A +F + ++ + WNA+I
Sbjct: 278 TKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALIS 337
Query: 496 GLAMHGDANLTLKIYSDLE-KRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNV 554
+G N L ++ +L+ ++N+KLN IT + LS C G ++LG R+ S + +
Sbjct: 338 AYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELG-RWIHSYIKKHGI 396
Query: 555 EPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAK 614
+ ++ + + G LE + EV S+ K DV +W ++ +HG G A
Sbjct: 397 RMNFHVTSALIHMYSKCGDLEKSREVFNSVE-KRDVFVWSAMIGGLAMHG---CGNEAVD 452
Query: 615 SLAGLQPSH-GPSRVLLSNIY---ADAGRWEDAFSIRKEMR 651
+Q ++ P+ V +N++ + G ++A S+ +M
Sbjct: 453 MFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQME 493
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 150/298 (50%), Gaps = 12/298 (4%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+ +V L C+ + G+Q+ S I ++ + N + N+++++Y KCG I AK +FD+
Sbjct: 233 VTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDA 292
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
D V M+ GY ++ AREV + P K V++ ++I + QN EAL VF
Sbjct: 293 MEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVF 352
Query: 144 RDMRILGVIP-NEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
++++ + N++TL S +S+ +G + R +H + K I +++ L++MY
Sbjct: 353 HELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSK 412
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
C L ++R +F+ +++R++ W+ M+ G A G A ++F ++ +V G
Sbjct: 413 CGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNV 472
Query: 263 L----QVERLSEALTMYRAMLCD-GIAPND---VMIVDLISACG---RAMAFGEGLQI 309
+ EA +++ M + GI P + IVD++ G +A+ F E + I
Sbjct: 473 FCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPI 530
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 75/155 (48%), Gaps = 31/155 (20%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
++ LVS L C+ A+ G+ IHS I K G+ N + ++LI++Y+KCG + +++ +F+
Sbjct: 365 QITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFN 424
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
S + R+VF +++MI G A + C EA+++
Sbjct: 425 SV----------------------EKRDVF---------VWSAMIGGLAMHGCGNEAVDM 453
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRML 177
F M+ V PN VT +V + H G + E L
Sbjct: 454 FYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESL 488
>gi|449460189|ref|XP_004147828.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Cucumis sativus]
Length = 759
Score = 335 bits (859), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 203/589 (34%), Positives = 316/589 (53%), Gaps = 49/589 (8%)
Query: 111 VFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGG 170
+F +P Y+ M+ +++ + + +F+ L + P +I + G
Sbjct: 56 IFTSSPSPDASVYSCMLKYYSRMGAHNQVVSLFKCTHSLNLRPQPFVYIYLIKLAGKSGN 115
Query: 171 IWECRMLHGLVIKL--MIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKER--------- 219
++ H V+KL + D F I +L+MY + AR+LF++M ER
Sbjct: 116 LF-----HAYVLKLGHIDDHF--IRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMI 168
Query: 220 ----------------------NIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGT 257
NI++W M+ G+AK G +E AR F+ +P + VVSW
Sbjct: 169 SGCWKSGNETEAVVLFNMMPARNIITWTSMVTGYAKMGDLESARRYFDEMPERSVVSWNA 228
Query: 258 MIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAG 317
M Y Q E EAL ++ ML +GI P+D V IS+C I +I +
Sbjct: 229 MQSAYAQKECPKEALNLFHQMLEEGITPDDTTWVVTISSCSSIGDPTLADSILRMIDQKH 288
Query: 318 FDCYDFIQATIIHFYAACGRINLARLQF-ELGIKDHIASWNALIAGFIRNGMIEDARQLF 376
F++ ++ +A G + +AR F ELG + + +WN +I+ + R G + AR+LF
Sbjct: 289 IVLNSFVKTALLDMHAKFGNLEIARNIFDELGSQRNAVTWNIMISAYTRVGKLSLARELF 348
Query: 377 NNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDA-GVKPNEITMVSVFCAIASSGTL 435
+NM KRDV SW++MI+GYAQN + M++ELF M+ ++P+E+T+ SV A G L
Sbjct: 349 DNMPKRDVVSWNSMIAGYAQNGESAMSIELFKEMISCMDIQPDEVTIASVLSACGHIGAL 408
Query: 436 KEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIIC 495
K W + V +I L + ++I MY+KCGS+ A +F + R V +N +I
Sbjct: 409 KLSYWVLDIVREKNIKLGISGFNSLIFMYSKCGSVADAHRIFQTMGTR--DVVSFNTLIS 466
Query: 496 GLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVE 555
G A +G +K+ +E+ I+ + +T+IGVL+ C HAGL++ G+ FKS+++
Sbjct: 467 GFAANGHGKEAIKLVLTMEEEGIEPDHVTYIGVLTACSHAGLLNEGKNVFKSIQA----- 521
Query: 556 PDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKS 615
P + HY CMVDLLGRAG+L++A+ +I+SMPMK ++G+LL ASRIH V +GE AA
Sbjct: 522 PTVDHYACMVDLLGRAGELDEAKMLIQSMPMKPHAGVYGSLLNASRIHKRVGLGELAASK 581
Query: 616 LAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
L L+P + + VLLSNIYA GRWED +R+ M+ G+K+ G S V
Sbjct: 582 LFELEPQNLGNYVLLSNIYASFGRWEDVKRVREMMKKGGLKKSVGMSWV 630
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 125/475 (26%), Positives = 227/475 (47%), Gaps = 78/475 (16%)
Query: 37 IAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMI 96
+A G H+ + K G + FI+N+++++YAK G + A+++F+ + N MI
Sbjct: 109 LAGKSGNLFHAYVLKLGHIDDHFIRNAILDMYAKNGQVDLARNLFEQMAERTLADWNSMI 168
Query: 97 SG-------------------------------YIRNDRLNDAREVFDKTPIKCCVSYTS 125
SG Y + L AR FD+ P + VS+ +
Sbjct: 169 SGCWKSGNETEAVVLFNMMPARNIITWTSMVTGYAKMGDLESARRYFDEMPERSVVSWNA 228
Query: 126 MIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLM 185
M +AQ +C +EAL +F M G+ P++ T ISS +G + ++ +
Sbjct: 229 MQSAYAQKECPKEALNLFHQMLEEGITPDDTTWVVTISSCSSIGDPTLADSILRMIDQKH 288
Query: 186 IDGFVIISTNLLNMYCVCSSLVEARSLFDEM-KERNIVSWNVMLNGFAKAGLVELARELF 244
I + T LL+M+ +L AR++FDE+ +RN V+WN+M++ + + G + LARELF
Sbjct: 289 IVLNSFVKTALLDMHAKFGNLEIARNIFDELGSQRNAVTWNIMISAYTRVGKLSLARELF 348
Query: 245 ERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAML-CDGIAPNDVMIVDLISACGRAMAF 303
+ +P +DVVSW +MI GY Q + ++ +++ M+ C I P++V I ++SACG A
Sbjct: 349 DNMPKRDVVSWNSMIAGYAQNGESAMSIELFKEMISCMDIQPDEVTIASVLSACGHIGAL 408
Query: 304 GEGLQIHSII----VKAGFDCYDFIQATIIHFYAACGRINLARLQFE-LGIKDHIASWNA 358
+ I+ +K G ++ ++I Y+ CG + A F+ +G +D + S+N
Sbjct: 409 KLSYWVLDIVREKNIKLGISGFN----SLIFMYSKCGSVADAHRIFQTMGTRD-VVSFNT 463
Query: 359 LIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPN 418
LI+GF NG ++A +L M+ + G++P+
Sbjct: 464 LISGFAANGHGKEAIKLVLTME-------------------------------EEGIEPD 492
Query: 419 EITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTA 473
+T + V A + +G L EG+ + + ++ + A ++D+ + G ++ A
Sbjct: 493 HVTYIGVLTACSHAGLLNEGKNVFKSIQAPTV----DHYACMVDLLGRAGELDEA 543
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 91/311 (29%), Positives = 157/311 (50%), Gaps = 46/311 (14%)
Query: 57 NTFIQNSLINLYAKCGLISQAKSMFDSC-STLDPVACNIMISGYIRNDRLNDAREVFDKT 115
N+F++ +L++++AK G + A+++FD S + V NIMIS Y R +L+ ARE+FD
Sbjct: 292 NSFVKTALLDMHAKFGNLEIARNIFDELGSQRNAVTWNIMISAYTRVGKLSLARELFDNM 351
Query: 116 PIKCCVSYTSMIMGFAQNDCWREALEVFRDM-RILGVIPNEVTLASVISSSVHLGGI--- 171
P + VS+ SMI G+AQN ++E+F++M + + P+EVT+ASV+S+ H+G +
Sbjct: 352 PKRDVVSWNSMIAGYAQNGESAMSIELFKEMISCMDIQPDEVTIASVLSACGHIGALKLS 411
Query: 172 -WECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNG 230
W ++ IKL I GF +L+ MY C S+ +A +F M R++VS+N +++G
Sbjct: 412 YWVLDIVREKNIKLGISGF----NSLIFMYSKCGSVADAHRIFQTMGTRDVVSFNTLISG 467
Query: 231 FAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMI 290
FA G EA+ + M +GI P+ V
Sbjct: 468 FAANG-------------------------------HGKEAIKLVLTMEEEGIEPDHVTY 496
Query: 291 VDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFE-LGI 349
+ +++AC A EG + I D Y A ++ G ++ A++ + + +
Sbjct: 497 IGVLTACSHAGLLNEGKNVFKSIQAPTVDHY----ACMVDLLGRAGELDEAKMLIQSMPM 552
Query: 350 KDHIASWNALI 360
K H + +L+
Sbjct: 553 KPHAGVYGSLL 563
>gi|356533814|ref|XP_003535453.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g25360-like [Glycine max]
Length = 782
Score = 335 bits (859), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 211/653 (32%), Positives = 330/653 (50%), Gaps = 22/653 (3%)
Query: 31 RYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPV 90
RY + S + +H+ I SG + I N LI+ Y K I A+ +FD D V
Sbjct: 4 RYLAQLSHTSFARAVHAHILTSGFKPFPLIINRLIDHYCKSFNIPYARYLFDKIPKPDIV 63
Query: 91 ACNIMISGYIRNDRLNDAREVFDKTP--IKCCVSYTSMIMGFAQNDCWREALEVFRDMRI 148
A M+S Y + A ++F+ TP I+ VSY +MI F+ + AL++F M+
Sbjct: 64 AATTMLSAYSAAGNIKLAHQLFNATPMSIRDTVSYNAMITAFSHSHDGHAALQLFVQMKR 123
Query: 149 LGVIPNEVTLASVISS-SVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSS-- 205
LG +P+ T +SV+ + S+ C+ LH V K + L++ Y C+S
Sbjct: 124 LGFVPDPFTFSSVLGALSLIADEETHCQQLHCEVFKWGALSVPSVLNALMSCYVSCASSP 183
Query: 206 -------LVEARSLFDEMK--ERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWG 256
+ AR LFDE R+ +W ++ G+ + + AREL E + V+W
Sbjct: 184 LVNSCVLMAAARKLFDEAPPGRRDEPAWTTIIAGYVRNDDLVAARELLEGMTDHIAVAWN 243
Query: 257 TMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKA 316
MI GY+ EA + R M GI ++ +ISA A F G Q+H+ +++
Sbjct: 244 AMISGYVHRGFYEEAFDLLRRMHSLGIQLDEYTYTSVISAASNAGLFNIGRQVHAYVLRT 303
Query: 317 GFDCYDF----IQATIIHFYAACGRINLARLQFE-LGIKDHIASWNALIAGFIRNGMIED 371
+ +I Y CG++ AR F+ + +KD + SWNA+++G + IE+
Sbjct: 304 VVQPSGHFVLSVNNALITLYTRCGKLVEARRVFDKMPVKD-LVSWNAILSGCVNARRIEE 362
Query: 372 ARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIAS 431
A +F M R + +W+ MISG AQN L+LF+ M G++P + + +
Sbjct: 363 ANSIFREMPVRSLLTWTVMISGLAQNGFGEEGLKLFNQMKLEGLEPCDYAYAGAIASCSV 422
Query: 432 SGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWN 491
G+L G+ H ++ + ++ A+I MY++CG + A VF + SVS WN
Sbjct: 423 LGSLDNGQQLHSQIIQLGHDSSLSVGNALITMYSRCGLVEAADTVFLTM-PYVDSVS-WN 480
Query: 492 AIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSV 551
A+I LA HG +++Y + K +I + ITF+ +LS C HAGLV G YF +M+
Sbjct: 481 AMIAALAQHGHGVQAIQLYEKMLKEDILPDRITFLTILSACSHAGLVKEGRHYFDTMRVC 540
Query: 552 YNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGER 611
Y + P+ HY ++DLL RAG +A+ V SMP + IW LLA IHGN+E+G +
Sbjct: 541 YGITPEEDHYSRLIDLLCRAGMFSEAKNVTESMPFEPGAPIWEALLAGCWIHGNMELGIQ 600
Query: 612 AAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
AA L L P + + LSN+YA G+W++ +RK MR+ G+K+ PG S +
Sbjct: 601 AADRLLELMPQQDGTYISLSNMYAALGQWDEVARVRKLMRERGVKKEPGCSWI 653
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 111/250 (44%), Gaps = 40/250 (16%)
Query: 9 VFNSQK-ANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINL 67
+FN K L+ DY A A+ CS ++ GQQ+HS I + G +S+ + N+LI +
Sbjct: 397 LFNQMKLEGLEPCDY--AYAGAIASCSVLGSLDNGQQLHSQIIQLGHDSSLSVGNALITM 454
Query: 68 YAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMI 127
Y++CGL+ A ++F + +D V S+ +MI
Sbjct: 455 YSRCGLVEAADTVFLTMPYVDSV-------------------------------SWNAMI 483
Query: 128 MGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECR-MLHGLVIKLMI 186
AQ+ +A++++ M ++P+ +T +++S+ H G + E R + + I
Sbjct: 484 AALAQHGHGVQAIQLYEKMLKEDILPDRITFLTILSACSHAGLVKEGRHYFDTMRVCYGI 543
Query: 187 DGFVIISTNLLNMYCVCSSLVEARSLFDEMK-ERNIVSWNVMLNGFAKAGLVEL----AR 241
+ L+++ C EA+++ + M E W +L G G +EL A
Sbjct: 544 TPEEDHYSRLIDLLCRAGMFSEAKNVTESMPFEPGAPIWEALLAGCWIHGNMELGIQAAD 603
Query: 242 ELFERIPSKD 251
L E +P +D
Sbjct: 604 RLLELMPQQD 613
>gi|356542389|ref|XP_003539649.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Glycine max]
Length = 676
Score = 335 bits (859), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 210/640 (32%), Positives = 313/640 (48%), Gaps = 98/640 (15%)
Query: 28 SALRYCSAH--IAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCS 85
S L+ C A ++ Q +Q H L+ + GL +T+ LINL + L A
Sbjct: 3 SELKKCFAWGLKSLHQAKQCHCLLLRLGLHQDTY----LINLLLRSSLHFAATQY----- 53
Query: 86 TLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRD 145
A VF +TP Y ++I G ND +R+A+ V+
Sbjct: 54 ----------------------ATVVFAQTPHPNIFLYNTLIRGMVSNDAFRDAVSVYAS 91
Query: 146 MRILGVIPNEVTLASVISSSVHLGGIWECRM-LHGLVIKLMIDGFVIISTNLLNMYCVCS 204
MR G P+ T V+ + L + + LH LVIK D V + T L+ +Y
Sbjct: 92 MRQHGFAPDNFTFPFVLKACTRLPHYFHVGLSLHSLVIKTGFDWDVFVKTGLVCLY---- 147
Query: 205 SLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQ 264
+K G + AR++F+ IP K+VVSW +I GY++
Sbjct: 148 ---------------------------SKNGFLTDARKVFDEIPEKNVVSWTAIICGYIE 180
Query: 265 VERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFI 324
EAL ++R +L G+ P+ +V ++ AC R G I + ++G F+
Sbjct: 181 SGCFGEALGLFRGLLEMGLRPDSFTLVRILYACSRVGDLASGRWIDGYMRESGSVGNVFV 240
Query: 325 QATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDV 384
+++ YA CG + E+AR++F+ M ++DV
Sbjct: 241 ATSLVDMYAKCGSM-------------------------------EEARRVFDGMVEKDV 269
Query: 385 YSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEY 444
WSA+I GYA N P AL++F M V+P+ MV VF A + G L+ G WA
Sbjct: 270 VCWSALIQGYASNGMPKEALDVFFEMQRENVRPDCYAMVGVFSACSRLGALELGNWARGL 329
Query: 445 VLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDAN 504
+ + N L A+ID YAKCGS+ A EVF +R + V +NA+I GLAM G
Sbjct: 330 MDGDEFLSNPVLGTALIDFYAKCGSVAQAKEVFKGMRRKDCVV--FNAVISGLAMCGHVG 387
Query: 505 LTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCM 564
++ + K ++ + TF+G+L C HAGLVD G RYF M SV++V P ++HYGCM
Sbjct: 388 AAFGVFGQMVKVGMQPDGNTFVGLLCGCTHAGLVDDGHRYFSGMSSVFSVTPTIEHYGCM 447
Query: 565 VDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHG 624
VDL RAG L +A+++IRSMPM+A+ ++WG LL R+H + ++ E K L L+P +
Sbjct: 448 VDLQARAGLLVEAQDLIRSMPMEANSIVWGALLGGCRLHKDTQLAEHVLKQLIELEPWNS 507
Query: 625 PSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
VLLSNIY+ + RW++A IR + GM++LPG S V
Sbjct: 508 GHYVLLSNIYSASHRWDEAEKIRSSLNQKGMQKLPGCSWV 547
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 100/224 (44%), Gaps = 31/224 (13%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
LV L CS ++ G+ I + +SG N F+ SL+++YAKCG + +A+ +FD
Sbjct: 204 FTLVRILYACSRVGDLASGRWIDGYMRESGSVGNVFVATSLVDMYAKCGSMEEARRVFDG 263
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
D V + +I GY A N +EAL+VF
Sbjct: 264 MVEKDVVCWSALIQGY-------------------------------ASNGMPKEALDVF 292
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
+M+ V P+ + V S+ LG + GL+ ++ T L++ Y C
Sbjct: 293 FEMQRENVRPDCYAMVGVFSACSRLGALELGNWARGLMDGDEFLSNPVLGTALIDFYAKC 352
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERI 247
S+ +A+ +F M+ ++ V +N +++G A G V A +F ++
Sbjct: 353 GSVAQAKEVFKGMRRKDCVVFNAVISGLAMCGHVGAAFGVFGQM 396
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 95/248 (38%), Gaps = 35/248 (14%)
Query: 2 PLDHFHSVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQ 61
P + F Q+ N++ Y A+V CS A+ G L+ SN +
Sbjct: 285 PKEALDVFFEMQRENVRPDCY--AMVGVFSACSRLGALELGNWARGLMDGDEFLSNPVLG 342
Query: 62 NSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCV 121
+LI+ YAKCG ++QAK +F G R D CV
Sbjct: 343 TALIDFYAKCGSVAQAKEVF---------------KGMRRKD----------------CV 371
Query: 122 SYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWEC-RMLHGL 180
+ ++I G A A VF M +G+ P+ T ++ H G + + R G+
Sbjct: 372 VFNAVISGLAMCGHVGAAFGVFGQMVKVGMQPDGNTFVGLLCGCTHAGLVDDGHRYFSGM 431
Query: 181 VIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMK-ERNIVSWNVMLNGFAKAGLVEL 239
+ + ++++ LVEA+ L M E N + W +L G +L
Sbjct: 432 SSVFSVTPTIEHYGCMVDLQARAGLLVEAQDLIRSMPMEANSIVWGALLGGCRLHKDTQL 491
Query: 240 ARELFERI 247
A + +++
Sbjct: 492 AEHVLKQL 499
>gi|449443909|ref|XP_004139718.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 642
Score = 335 bits (859), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 180/452 (39%), Positives = 260/452 (57%), Gaps = 30/452 (6%)
Query: 237 VELARELFERIPSKDVVSWGTMI-------DGYLQVERLSEALTMYRAMLCDG-IAPNDV 288
++ AR +F ++P + W T++ D +LQ SEAL ++ AMLCDG + PN
Sbjct: 68 IDYARAVFRQMPEPNCFCWNTILRVLAETNDEHLQ----SEALMLFSAMLCDGRVKPNRF 123
Query: 289 MIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLA------- 341
++ AC RA EG QIH +IVK GF +F+ + ++ Y C + A
Sbjct: 124 TFPSVLKACARASRLREGKQIHGLIVKFGFHEDEFVISNLVRMYVMCAVMEDAYSLFCKN 183
Query: 342 ------RLQFELGIKDH---IASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMIS 392
Q EL + + WN +I G +R G I+ A+ LF+ M +R V SW+ MIS
Sbjct: 184 VVDFDGSCQMELDKRKQDGNVVLWNIMIDGQVRLGDIKSAKNLFDEMPQRSVVSWNVMIS 243
Query: 393 GYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITL 452
GYAQN A+ LF M + + PN +T+VSV AIA G L+ G+W H Y N I +
Sbjct: 244 GYAQNGHFIEAINLFQEMQSSNIDPNYVTLVSVLPAIARIGALELGKWIHLYAGKNKIEI 303
Query: 453 NDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSD 512
+D L +A++DMY+KCGSI+ A +VF + R W+AII AMHG A + +
Sbjct: 304 DDVLGSALVDMYSKCGSIDEALQVFETLPKRNAIT--WSAIIGAFAMHGRAEDAIIHFHL 361
Query: 513 LEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAG 572
+ K + N + +IG+LS C HAGLV+ G +F M V ++P ++HYGCMVDLLGRAG
Sbjct: 362 MGKAGVTPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGRAG 421
Query: 573 QLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSN 632
LE+AEE+IR+MP++ D VIW LL A ++H N+++GER A++L L P S V LSN
Sbjct: 422 HLEEAEELIRNMPIEPDDVIWKALLGACKMHKNLKMGERVAETLMELAPHDSGSYVALSN 481
Query: 633 IYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
+YA G WE +R +M+ +++ PG S +
Sbjct: 482 LYASLGNWEAVARVRLKMKGMDIRKDPGCSWI 513
Score = 155 bits (392), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 116/434 (26%), Positives = 196/434 (45%), Gaps = 67/434 (15%)
Query: 108 AREVFDKTPIKCCVSYTSMIMGFAQND---CWREALEVFRDMRILG-VIPNEVTLASVIS 163
AR VF + P C + +++ A+ + EAL +F M G V PN T SV+
Sbjct: 71 ARAVFRQMPEPNCFCWNTILRVLAETNDEHLQSEALMLFSAMLCDGRVKPNRFTFPSVLK 130
Query: 164 SSVHLGGIWECRMLHGLVIKLMI--DGFVIISTNLLNMYCVCSSLVEARSLF-------- 213
+ + E + +HGL++K D FVI +NL+ MY +C+ + +A SLF
Sbjct: 131 ACARASRLREGKQIHGLIVKFGFHEDEFVI--SNLVRMYVMCAVMEDAYSLFCKNVVDFD 188
Query: 214 -------DEMKER-NIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQV 265
D+ K+ N+V WN+M++G + G ++ A+ LF+ +P + VVSW MI GY Q
Sbjct: 189 GSCQMELDKRKQDGNVVLWNIMIDGQVRLGDIKSAKNLFDEMPQRSVVSWNVMISGYAQN 248
Query: 266 ERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQ 325
EA+ +++ M I PN V +V ++ A R A G IH K + D +
Sbjct: 249 GHFIEAINLFQEMQSSNIDPNYVTLVSVLPAIARIGALELGKWIHLYAGKNKIEIDDVLG 308
Query: 326 ATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVY 385
+ ++ Y+ CG I+ A FE K + +W+A+I F +G ED
Sbjct: 309 SALVDMYSKCGSIDEALQVFETLPKRNAITWSAIIGAFAMHGRAED-------------- 354
Query: 386 SWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYV 445
A+ FH M AGV PN++ + + A + +G ++EGR ++
Sbjct: 355 -----------------AIIHFHLMGKAGVTPNDVAYIGILSACSHAGLVEEGRSFFSHM 397
Query: 446 LNNSITLNDNLS--AAIIDMYAKCGSINTAFEVFYHIRDRTTSVSP----WNAIICGLAM 499
+ + L + ++D+ + G + A E+ R + P W A++ M
Sbjct: 398 V-KVVGLQPRIEHYGCMVDLLGRAGHLEEAEELI-----RNMPIEPDDVIWKALLGACKM 451
Query: 500 HGDANLTLKIYSDL 513
H + + ++ L
Sbjct: 452 HKNLKMGERVAETL 465
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 99/381 (25%), Positives = 170/381 (44%), Gaps = 78/381 (20%)
Query: 28 SALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMF------ 81
S L+ C+ + +G+QIH LI K G + F+ ++L+ +Y C ++ A S+F
Sbjct: 127 SVLKACARASRLREGKQIHGLIVKFGFHEDEFVISNLVRMYVMCAVMEDAYSLFCKNVVD 186
Query: 82 --DSCS-TLDP-------VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFA 131
SC LD V NIMI G +R + A+ +FD+ P + VS+ MI G+A
Sbjct: 187 FDGSCQMELDKRKQDGNVVLWNIMIDGQVRLGDIKSAKNLFDEMPQRSVVSWNVMISGYA 246
Query: 132 QNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVI 191
QN + EA+ +F++M+ + PN VTL SV+ + +G + + +H K I+ +
Sbjct: 247 QNGHFIEAINLFQEMQSSNIDPNYVTLVSVLPAIARIGALELGKWIHLYAGKNKIEIDDV 306
Query: 192 ISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKD 251
+ + L++MY C S+ EA +F+ + +RN ++W+ ++ FA G
Sbjct: 307 LGSALVDMYSKCGSIDEALQVFETLPKRNAITWSAIIGAFAMHG---------------- 350
Query: 252 VVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHS 311
R +A+ + M G+ PNDV + ++SAC A EG S
Sbjct: 351 ---------------RAEDAIIHFHLMGKAGVTPNDVAYIGILSACSHAGLVEEGRSFFS 395
Query: 312 IIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIED 371
+VK +G++ I + ++ R G +E+
Sbjct: 396 HMVKV------------------------------VGLQPRIEHYGCMVDLLGRAGHLEE 425
Query: 372 ARQLFNNMQ-KRDVYSWSAMI 391
A +L NM + D W A++
Sbjct: 426 AEELIRNMPIEPDDVIWKALL 446
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 51/253 (20%), Positives = 104/253 (41%), Gaps = 63/253 (24%)
Query: 8 SVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINL 67
++F +++ + +Y + LVS L + A+ G+ IH K+ +E + + ++L+++
Sbjct: 256 NLFQEMQSSNIDPNY-VTLVSVLPAIARIGALELGKWIHLYAGKNKIEIDDVLGSALVDM 314
Query: 68 YAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMI 127
Y+KCG I +A +F++ P + ++++++I
Sbjct: 315 YSKCGSIDEALQVFET-------------------------------LPKRNAITWSAII 343
Query: 128 MGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMID 187
FA + +A+ F M GV PN+V ++S+ H G + E R ++K++
Sbjct: 344 GAFAMHGRAEDAIIHFHLMGKAGVTPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVV-- 401
Query: 188 GFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERI 247
G + I + M++ +AG +E A EL +
Sbjct: 402 GL----------------------------QPRIEHYGCMVDLLGRAGHLEEAEELIRNM 433
Query: 248 P-SKDVVSWGTMI 259
P D V W ++
Sbjct: 434 PIEPDDVIWKALL 446
>gi|222636196|gb|EEE66328.1| hypothetical protein OsJ_22569 [Oryza sativa Japonica Group]
Length = 1287
Score = 335 bits (859), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 177/527 (33%), Positives = 299/527 (56%), Gaps = 5/527 (0%)
Query: 142 VFRDMRILGVIPNEVTLASVIS-SSVHLGGIWECRMLHGLVIKLMIDGFV-IISTNLLNM 199
+FR MR V P+ T + SS C MLH ++ M+ ++ +L++M
Sbjct: 31 LFRRMRRAAVRPDGFTFHFLFKCSSSSRPRALLCTMLHAACLRTMLPSAAPFVANSLIHM 90
Query: 200 YCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMI 259
Y + R FDE+ ++ VSW ++++G AK G++ AR L + P +DV+SW ++I
Sbjct: 91 YTELGLAGDVRRAFDEIPVKDAVSWTMVISGLAKMGMLSDARLLLAQAPVRDVISWTSLI 150
Query: 260 DGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFD 319
Y + +R EA+ ++ ML +GIAP+DV ++ ++SAC + G +H ++ + G
Sbjct: 151 AAYSRADRAKEAVDCFKNMLSEGIAPDDVTVIGVLSACSQLKDLELGCSLHLLVKEKGMS 210
Query: 320 CYDFIQATIIHFYAACGRINLARLQFE-LGIKDHIASWNALIAGFIRNGMIEDARQLFNN 378
+ + +I YA CG AR F+ +G SWNA+I G+ ++G ++ AR LF+
Sbjct: 211 MSENLVVALIDMYAKCGDFGHAREVFDAVGRGRRPQSWNAIIDGYCKHGHVDVARSLFDQ 270
Query: 379 MQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG 438
M+ RD+ ++++MI+GY + Q AL LF M ++ + T+VS+ A AS G L +G
Sbjct: 271 MEVRDIITFNSMITGYIHSGQLREALLLFMNMRRHDLRVDNFTVVSLLSACASLGALPQG 330
Query: 439 RWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLA 498
R H + + + + A++DMY KCG +N A VF + R V W A+I GLA
Sbjct: 331 RALHACIELRLVETDIYIGTALLDMYMKCGRVNEATIVFQRMGKR--DVHAWTAMIAGLA 388
Query: 499 MHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDL 558
+G L+ + + + N +++I VL+ C H+ L++ G YF M+ +YN+ P +
Sbjct: 389 FNGMGKAGLEYFYQMRCDGFQPNPVSYIAVLTACSHSCLLNEGRLYFDEMRILYNIHPQI 448
Query: 559 KHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAG 618
+HYGCM+DLLGR+G L++A +++++MPM+ + VIW ++L+A R+H +++ + AA+ L
Sbjct: 449 EHYGCMIDLLGRSGLLDEAMDLVKTMPMQPNSVIWASILSACRVHKRIDLAQCAAEHLLK 508
Query: 619 LQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGVV 665
++P V L NI D+ +WEDA IR M + +K+ G+S V
Sbjct: 509 IEPDEDAVYVQLYNICIDSRKWEDASKIRMLMEERQVKKTAGYSSVT 555
Score = 189 bits (479), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 133/489 (27%), Positives = 241/489 (49%), Gaps = 42/489 (8%)
Query: 45 IHSLIFKSGLESNT-FIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRND 103
+H+ ++ L S F+ NSLI++Y + GL + FD D V+ ++ISG +
Sbjct: 67 LHAACLRTMLPSAAPFVANSLIHMYTELGLAGDVRRAFDEIPVKDAVSWTMVISGLAKMG 126
Query: 104 RLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVIS 163
L+DAR + + P++ +S+TS+I +++ D +EA++ F++M G+ P++VT+ V+S
Sbjct: 127 MLSDARLLLAQAPVRDVISWTSLIAAYSRADRAKEAVDCFKNMLSEGIAPDDVTVIGVLS 186
Query: 164 SSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEM-KERNIV 222
+ L + LH LV + + + L++MY C AR +FD + + R
Sbjct: 187 ACSQLKDLELGCSLHLLVKEKGMSMSENLVVALIDMYAKCGDFGHAREVFDAVGRGRRPQ 246
Query: 223 SWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDG 282
SWN +++G+ K G V++AR LF+++ +D++++ +MI GY+ +L EAL ++ M
Sbjct: 247 SWNAIIDGYCKHGHVDVARSLFDQMEVRDIITFNSMITGYIHSGQLREALLLFMNMRRHD 306
Query: 283 IAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLAR 342
+ ++ +V L+SAC A +G +H+ I + +I ++ Y CGR+N A
Sbjct: 307 LRVDNFTVVSLLSACASLGALPQGRALHACIELRLVETDIYIGTALLDMYMKCGRVNEAT 366
Query: 343 LQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNM 402
+ F+ K + +W A+IAG NGM G A
Sbjct: 367 IVFQRMGKRDVHAWTAMIAGLAFNGM------------------------GKA------- 395
Query: 403 ALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGR-WAHEYVLNNSITLNDNLSAAII 461
LE F+ M G +PN ++ ++V A + S L EGR + E + +I +I
Sbjct: 396 GLEYFYQMRCDGFQPNPVSYIAVLTACSHSCLLNEGRLYFDEMRILYNIHPQIEHYGCMI 455
Query: 462 DMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLT-------LKIYSDLE 514
D+ + G ++ A ++ + + SV W +I+ +H +L LKI D +
Sbjct: 456 DLLGRSGLLDEAMDLVKTMPMQPNSVI-WASILSACRVHKRIDLAQCAAEHLLKIEPDED 514
Query: 515 KRNIKLNSI 523
++L +I
Sbjct: 515 AVYVQLYNI 523
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 149/639 (23%), Positives = 275/639 (43%), Gaps = 107/639 (16%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
L CS + A+ Q+H + GL N F+ ++L+N Y A S+F +
Sbjct: 742 LGVCSTYEAL----QLHGRVLALGLCCNPFVGSALVNHYMHVESPHAALSLFRELPLQNT 797
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
CN+++ G + N +L + + CC F DMR
Sbjct: 798 AMCNVVLRG-LGNLKLTEE--------LICC----------------------FLDMRRQ 826
Query: 150 GVIPNEVTLASVISSSVHLGGIW--ECRMLHGLVIKL-MIDGFVIISTNLLNMYCVCSSL 206
+ N ++ + + G W + R LHG+V+K I + +S +L+++Y
Sbjct: 827 YLELNGLSYCYAMKG-CYQNGEWLEQGRQLHGVVLKAGWIPSNIFLSNSLVDLYSAIGDS 885
Query: 207 VEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVE 266
V D +K N I S+DV+SW +++ Y
Sbjct: 886 V------DTVKALN-------------------------DILSEDVISWNSILSMYADRG 914
Query: 267 RLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDF-IQ 325
+ EA+ + ML G P+ V L++ G+ + G+QIH I+ K GF C +Q
Sbjct: 915 HMKEAVYYLKQMLWHGKMPSVRSFVSLLALSGKTGDWQLGVQIHGIVHKLGFSCSSVHVQ 974
Query: 326 ATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVY 385
T+I Y C DH + +FN + +
Sbjct: 975 TTLIDMYGKCCCF------------DH-------------------SLAIFNEIPSIALE 1003
Query: 386 SWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIA--SSGTLKEGRWAHE 443
+++I+ + ALE+ H M+ GV P+++T + AI+ +S +L + H
Sbjct: 1004 CCNSLITSSLGCNMFDAALEILHCMIVEGVTPDDVTFSATMKAISLSASPSLTSCQMLHS 1063
Query: 444 YVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDA 503
++ ++ + +++I YA G ++++ +F + D +V + AII A +GD
Sbjct: 1064 CLVKLGFEMDMAVCSSLITAYACAGQLSSSHLIFEGLLD--PNVICFTAIISACARYGDG 1121
Query: 504 NLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGC 563
++++ + +K +++TF+ ++ C AG+ + G + M++ ++PD +H+ C
Sbjct: 1122 ARAMELFDQMVSSGLKPDNVTFLCAIAGCDQAGMFEEGRLVIELMRASRELDPDERHFAC 1181
Query: 564 MVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSH 623
MV+LL R G +++A E++ P++ W +LL + + HG +G+RAA L +
Sbjct: 1182 MVNLLSRDGFVKEAMEMMEQSPLRHYTKAWSSLLQSCKAHGENVLGKRAANMLIDVGRKD 1241
Query: 624 GPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
+ + +SN + D G E A I KEM + + G S
Sbjct: 1242 PATTLQVSNFFNDIGDRETALRI-KEMTNVKEVKKSGHS 1279
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 87/383 (22%), Positives = 171/383 (44%), Gaps = 63/383 (16%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
++ ++ L CS + G +H L+ + G+ + + +LI++YAKCG A+ +FD
Sbjct: 178 DVTVIGVLSACSQLKDLELGCSLHLLVKEKGMSMSENLVVALIDMYAKCGDFGHAREVFD 237
Query: 83 SCST-LDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALE 141
+ P + N +I GY ++ ++ AR +FD+ ++ +++ SMI G+ + REAL
Sbjct: 238 AVGRGRRPQSWNAIIDGYCKHGHVDVARSLFDQMEVRDIITFNSMITGYIHSGQLREALL 297
Query: 142 VFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYC 201
+F +MR + + T+ S++S+ LG + + R LH + +++ + I T LL+MY
Sbjct: 298 LFMNMRRHDLRVDNFTVVSLLSACASLGALPQGRALHACIELRLVETDIYIGTALLDMYM 357
Query: 202 VCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDG 261
C + EA +F M +R++ +W M+ G A G+ + E F +
Sbjct: 358 KCGRVNEATIVFQRMGKRDVHAWTAMIAGLAFNGMGKAGLEYFYQ--------------- 402
Query: 262 YLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCY 321
M CDG PN V + +++AC + E
Sbjct: 403 ----------------MRCDGFQPNPVSYIAVLTACSHSCLLNE---------------- 430
Query: 322 DFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ- 380
GR+ ++ I I + +I R+G++++A L M
Sbjct: 431 --------------GRLYFDEMRILYNIHPQIEHYGCMIDLLGRSGLLDEAMDLVKTMPM 476
Query: 381 KRDVYSWSAMISGYAQNEQPNMA 403
+ + W++++S +++ ++A
Sbjct: 477 QPNSVIWASILSACRVHKRIDLA 499
Score = 46.6 bits (109), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 56/270 (20%), Positives = 108/270 (40%), Gaps = 52/270 (19%)
Query: 342 RLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPN 401
R + ++D +AS N +I GFIR+G+ + AR VY W
Sbjct: 690 RSSVTMAVRD-VASLNRMITGFIRDGLADRARA---------VYRW-------------- 725
Query: 402 MALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAII 461
MV +G++ T F I + E H VL + N + +A++
Sbjct: 726 --------MVASGIRETPHT----FSTILGVCSTYEALQLHGRVLALGLCCNPFVGSALV 773
Query: 462 DMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLK-----IYSDLEKR 516
+ Y S + A +F + + T+ +C + + G NL L + D+ ++
Sbjct: 774 NHYMHVESPHAALSLFRELPLQNTA-------MCNVVLRGLGNLKLTEELICCFLDMRRQ 826
Query: 517 NIKLNSITFIGVLSTCCHAG-LVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLE 575
++LN +++ + C G ++ G + + + ++ +VDL G
Sbjct: 827 YLELNGLSYCYAMKGCYQNGEWLEQGRQLHGVVLKAGWIPSNIFLSNSLVDLYSAIGDSV 886
Query: 576 DAEEVIRSMPMKADVVIWGTLLA--ASRIH 603
D + + + + DV+ W ++L+ A R H
Sbjct: 887 DTVKALNDI-LSEDVISWNSILSMYADRGH 915
>gi|359490816|ref|XP_002271825.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Vitis vinifera]
Length = 702
Score = 335 bits (859), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 195/628 (31%), Positives = 329/628 (52%), Gaps = 59/628 (9%)
Query: 42 GQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIR 101
G+Q+H+ K+G + F++ L+ +Y + G
Sbjct: 78 GKQVHAHTLKTGFHGHEFVETKLLQMYGRFGC---------------------------- 109
Query: 102 NDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASV 161
L+DA VF K P + S+T+++ + + EAL +F +++ + V
Sbjct: 110 ---LDDANLVFVKMPQRNLYSWTAILSVHVDHGYFEEALSLFEKLQLDDIGLEFFVFPVV 166
Query: 162 ISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNI 221
+ L + R LHG+VIK C+ + A +F +N+
Sbjct: 167 LKLCGGLRVLELGRQLHGVVIKR------------------CADMGSALKIFSGFSVKNV 208
Query: 222 VSWNVMLNGFAKAGLVELARELFERIP--SKDVVSWGTMIDGYLQVERLSEALTMYRAML 279
VS+N M+ G+ + G VE A+ELF+++ KD +SW +MI GY EAL+M+R +L
Sbjct: 209 VSYNTMIVGYCENGNVEKAKELFDQMELVGKDTISWNSMISGYADNLLFDEALSMFRDLL 268
Query: 280 CD-GIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRI 338
+ GI + + +++AC + G ++H+ V G F+ ++ Y+ C +
Sbjct: 269 MEEGIEADSFTLGSVLAACADMASLRRGKEVHAQAVVRGLHWNTFVGGALVEMYSKCEDL 328
Query: 339 NLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ----KRDVYSWSAMISGY 394
A+L F+ + A+WN LI+G+ +E+ + L M+ + +VY+W+ +ISG+
Sbjct: 329 KAAQLAFDGVTERDTATWNVLISGYACCNQLENIQNLIQKMKGDGFEPNVYTWNGIISGH 388
Query: 395 AQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLND 454
+N +AL LF M + ++P+ T+ + A A T+ G+ H + + L+
Sbjct: 389 VENGHNELALRLFTEMQTSSLRPDIYTVGIILPACARLATIARGKQVHAHSIRQGYELDV 448
Query: 455 NLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLE 514
++ AA++DMYAKCGSI A +V+ I + ++ NA++ AMHG + + ++ ++
Sbjct: 449 HIGAALVDMYAKCGSIKHAMQVYNRISN--PNLVSQNAMLTAYAMHGHGDEGIALFRNML 506
Query: 515 KRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQL 574
+ + +TF+ VLS+C HAG V+ G +F M + YNV P LKHY C+VDLL RAG+L
Sbjct: 507 GNGFRPDHVTFLSVLSSCVHAGAVETGHEFFDLM-TYYNVTPSLKHYTCIVDLLSRAGRL 565
Query: 575 EDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIY 634
++A E+++ +P K D V+WG LL I GNVE+GE AA+SL L+P++ + VLL+N+Y
Sbjct: 566 DEAYELVKKIPRKPDSVMWGALLGGCVIWGNVELGEIAAESLIELEPNNTGNYVLLANLY 625
Query: 635 ADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
A AGRW D R+ ++D GM + PG S
Sbjct: 626 AYAGRWHDLDRTRQMIKDRGMHKSPGCS 653
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 112/483 (23%), Positives = 221/483 (45%), Gaps = 57/483 (11%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
L+ C + G+Q+H ++ K +C + A +F S +
Sbjct: 167 LKLCGGLRVLELGRQLHGVVIK------------------RCADMGSALKIFSGFSVKNV 208
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPI--KCCVSYTSMIMGFAQNDCWREALEVFRDMR 147
V+ N MI GY N + A+E+FD+ + K +S+ SMI G+A N + EAL +FRD+
Sbjct: 209 VSYNTMIVGYCENGNVEKAKELFDQMELVGKDTISWNSMISGYADNLLFDEALSMFRDLL 268
Query: 148 I-LGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSL 206
+ G+ + TL SV+++ + + + +H + + + L+ MY C L
Sbjct: 269 MEEGIEADSFTLGSVLAACADMASLRRGKEVHAQAVVRGLHWNTFVGGALVEMYSKCEDL 328
Query: 207 VEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIP----SKDVVSWGTMIDGY 262
A+ FD + ER+ +WNV+++G+A +E + L +++ +V +W +I G+
Sbjct: 329 KAAQLAFDGVTERDTATWNVLISGYACCNQLENIQNLIQKMKGDGFEPNVYTWNGIISGH 388
Query: 263 LQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD 322
++ AL ++ M + P+ + ++ AC R G Q+H+ ++ G++
Sbjct: 389 VENGHNELALRLFTEMQTSSLRPDIYTVGIILPACARLATIARGKQVHAHSIRQGYELDV 448
Query: 323 FIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKR 382
I A ++ YA CG I+ A Q++N +
Sbjct: 449 HIGAALVDMYAKCGS-------------------------------IKHAMQVYNRISNP 477
Query: 383 DVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAH 442
++ S +AM++ YA + + + LF M+ G +P+ +T +SV + +G ++ G
Sbjct: 478 NLVSQNAMLTAYAMHGHGDEGIALFRNMLGNGFRPDHVTFLSVLSSCVHAGAVETGHEFF 537
Query: 443 EYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGD 502
+ + ++T + I+D+ ++ G ++ A+E+ I + SV W A++ G + G+
Sbjct: 538 DLMTYYNVTPSLKHYTCIVDLLSRAGRLDEAYELVKKIPRKPDSVM-WGALLGGCVIWGN 596
Query: 503 ANL 505
L
Sbjct: 597 VEL 599
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/352 (22%), Positives = 149/352 (42%), Gaps = 36/352 (10%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
L S L C+ ++ +G+++H+ GL NTF+ +L+ +Y+KC + A+ FD
Sbjct: 278 FTLGSVLAACADMASLRRGKEVHAQAVVRGLHWNTFVGGALVEMYSKCEDLKAAQLAFDG 337
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTP----IKCCVSYTSMIMGFAQNDCWREA 139
+ D N++ISGY ++L + + + K ++ +I G +N A
Sbjct: 338 VTERDTATWNVLISGYACCNQLENIQNLIQKMKGDGFEPNVYTWNGIISGHVENGHNELA 397
Query: 140 LEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNM 199
L +F +M+ + P+ T+ ++ + L I + +H I+ + V I L++M
Sbjct: 398 LRLFTEMQTSSLRPDIYTVGIILPACARLATIARGKQVHAHSIRQGYELDVHIGAALVDM 457
Query: 200 YCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMI 259
Y C S+ A +++ + N+VS N ML +A G
Sbjct: 458 YAKCGSIKHAMQVYNRISNPNLVSQNAMLTAYAMHG------------------------ 493
Query: 260 DGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFD 319
E + ++R ML +G P+ V + ++S+C A A G + ++
Sbjct: 494 -------HGDEGIALFRNMLGNGFRPDHVTFLSVLSSCVHAGAVETGHEFFDLMTYYNVT 546
Query: 320 CYDFIQATIIHFYAACGRINLA-RLQFELGIKDHIASWNALIAGFIRNGMIE 370
I+ + GR++ A L ++ K W AL+ G + G +E
Sbjct: 547 PSLKHYTCIVDLLSRAGRLDEAYELVKKIPRKPDSVMWGALLGGCVIWGNVE 598
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 104/256 (40%), Gaps = 52/256 (20%)
Query: 293 LISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDH 352
L+ +C R + G+ Q+H+ +K GF ++F++ ++ Y
Sbjct: 68 LLESC-RTLNLGK--QVHAHTLKTGFHGHEFVETKLLQMYG------------------- 105
Query: 353 IASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMV- 411
R G ++DA +F M +R++YSW+A++S + + AL LF +
Sbjct: 106 ------------RFGCLDDANLVFVKMPQRNLYSWTAILSVHVDHGYFEEALSLFEKLQL 153
Query: 412 -DAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSA------------ 458
D G++ +V C L+ GR H V+ + L
Sbjct: 154 DDIGLEFFVFPVVLKLC--GGLRVLELGRQLHGVVIKRCADMGSALKIFSGFSVKNVVSY 211
Query: 459 -AIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSD-LEKR 516
+I Y + G++ A E+F + WN++I G A + + L ++ D L +
Sbjct: 212 NTMIVGYCENGNVEKAKELFDQMELVGKDTISWNSMISGYADNLLFDEALSMFRDLLMEE 271
Query: 517 NIKLNSITFIGVLSTC 532
I+ +S T VL+ C
Sbjct: 272 GIEADSFTLGSVLAAC 287
>gi|449452775|ref|XP_004144134.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g56310-like [Cucumis sativus]
gi|449493602|ref|XP_004159370.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g56310-like [Cucumis sativus]
Length = 548
Score = 335 bits (858), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 170/452 (37%), Positives = 273/452 (60%), Gaps = 8/452 (1%)
Query: 216 MKERNIVSWNVMLNGFAKA----GLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEA 271
M R + N+ L+ F A GL A +F D+ + T I + A
Sbjct: 47 MLHRALDQDNLFLSQFIDACTSLGLSSYAFSIFSNKTHPDLRLYNTAIKALSKTSSPINA 106
Query: 272 LTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHF 331
+ +Y + DG+ P+ I ++ A + A G QIH+ V + D + ++I
Sbjct: 107 IWLYTRIRIDGLRPDSYSIPSVLKAVVKLSAVEVGRQIHTQTVSSALDMDVNVATSLIQM 166
Query: 332 YAACGRINLARLQFE-LGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAM 390
Y++CG ++ AR F+ +G KD +A WNA++AG+++ G ++ AR++FN M +R+V SW+ +
Sbjct: 167 YSSCGFVSDARKLFDFVGFKD-VALWNAMVAGYVKVGELKSARKVFNEMPQRNVISWTTL 225
Query: 391 ISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSI 450
I+GYAQ +P+ A+ELF M V+P+EI M++V A A G L+ G W H Y+ + +
Sbjct: 226 IAGYAQTNRPHEAIELFRKMQLEEVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHGL 285
Query: 451 TLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIY 510
+L A+IDMYAK G+I A EVF +++ + SV W+ +I LA+HG + ++
Sbjct: 286 CRIVSLYNALIDMYAKSGNIRRALEVFENMKQK--SVITWSTVIAALALHGLGGEAIDMF 343
Query: 511 SDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGR 570
+EK ++ N +TF+ +LS C H G+VD+G YF M+S+Y +EP ++HYGCM+DLL R
Sbjct: 344 LRMEKAKVRPNEVTFVAILSACSHVGMVDVGRYYFDQMQSMYKIEPKIEHYGCMIDLLAR 403
Query: 571 AGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLL 630
AG L++A++++ MP +A+ +IWG+LLAAS H + E+ + A K LA L+P + + VLL
Sbjct: 404 AGYLQEAQKLLHDMPFEANAMIWGSLLAASNTHRDAELAQLALKHLAKLEPGNSGNYVLL 463
Query: 631 SNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
SN YA G+W ++ ++RK MR+ G+K+ PG S
Sbjct: 464 SNTYAALGKWNESGTVRKLMRNAGVKKAPGGS 495
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 128/498 (25%), Positives = 228/498 (45%), Gaps = 70/498 (14%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
L S L C H+ + QIH + L+ + + I+ GL S A S+F +
Sbjct: 25 LQFTSLLSNCRHHLHL---YQIHGFMLHRALDQDNLFLSQFIDACTSLGLSSYAFSIFSN 81
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
+ D N T IK +S I N W ++
Sbjct: 82 KTHPDLRLYN---------------------TAIKALSKTSSPI-----NAIW-----LY 110
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
+RI G+ P+ ++ SV+ + V L + R +H + +D V ++T+L+ MY C
Sbjct: 111 TRIRIDGLRPDSYSIPSVLKAVVKLSAVEVGRQIHTQTVSSALDMDVNVATSLIQMYSSC 170
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYL 263
+ +AR LFD + +++ WN M+ G+ K G ++ AR++F +P ++V+SW T+I GY
Sbjct: 171 GFVSDARKLFDFVGFKDVALWNAMVAGYVKVGELKSARKVFNEMPQRNVISWTTLIAGYA 230
Query: 264 QVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDF 323
Q R EA+ ++R M + + P+++ ++ ++SAC A G IH+ I K G
Sbjct: 231 QTNRPHEAIELFRKMQLEEVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHGL----- 285
Query: 324 IQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRD 383
C ++L +NALI + ++G I A ++F NM+++
Sbjct: 286 -----------CRIVSL---------------YNALIDMYAKSGNIRRALEVFENMKQKS 319
Query: 384 VYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHE 443
V +WS +I+ A + A+++F M A V+PNE+T V++ A + G + GR+ +
Sbjct: 320 VITWSTVIAALALHGLGGEAIDMFLRMEKAKVRPNEVTFVAILSACSHVGMVDVGRYYFD 379
Query: 444 YVLN-NSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGD 502
+ + I +ID+ A+ G + A ++ + + ++ W +++ H D
Sbjct: 380 QMQSMYKIEPKIEHYGCMIDLLARAGYLQEAQKLLHDMPFEANAM-IWGSLLAASNTHRD 438
Query: 503 ---ANLTLKIYSDLEKRN 517
A L LK + LE N
Sbjct: 439 AELAQLALKHLAKLEPGN 456
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 121/285 (42%), Gaps = 74/285 (25%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E+A+++ L C+ A+ G+ IH+ I K GL + N+LI++YAK G I +A
Sbjct: 254 EIAMLAVLSACADLGALELGEWIHNYIEKHGLCRIVSLYNALIDMYAKSGNIRRA----- 308
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
EVF+ K ++++++I A + EA+++
Sbjct: 309 --------------------------LEVFENMKQKSVITWSTVIAALALHGLGGEAIDM 342
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
F M V PNEVT +++S+ H+G M+D
Sbjct: 343 FLRMEKAKVRPNEVTFVAILSACSHVG---------------MVD--------------- 372
Query: 203 CSSLVEARSLFDEMK-----ERNIVSWNVMLNGFAKAGLVELARELFERIP-SKDVVSWG 256
R FD+M+ E I + M++ A+AG ++ A++L +P + + WG
Sbjct: 373 -----VGRYYFDQMQSMYKIEPKIEHYGCMIDLLARAGYLQEAQKLLHDMPFEANAMIWG 427
Query: 257 TMI--DGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGR 299
+++ + L++ + A L G + N V++ + +A G+
Sbjct: 428 SLLAASNTHRDAELAQLALKHLAKLEPGNSGNYVLLSNTYAALGK 472
>gi|115466810|ref|NP_001057004.1| Os06g0185700 [Oryza sativa Japonica Group]
gi|55773755|dbj|BAD72438.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113595044|dbj|BAF18918.1| Os06g0185700 [Oryza sativa Japonica Group]
gi|125596287|gb|EAZ36067.1| hypothetical protein OsJ_20377 [Oryza sativa Japonica Group]
Length = 673
Score = 335 bits (858), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 198/642 (30%), Positives = 320/642 (49%), Gaps = 96/642 (14%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
++ L AL+ C G+++H + K+G ++ F+ NSL+++YAK G
Sbjct: 123 DVVLSLALKACVRSADFRYGRRLHCDVVKAG-GADGFVMNSLVDMYAKAG---------- 171
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
L +AR+VFD+ P + VS+TSM+ G QN E L +
Sbjct: 172 ---------------------DLENARKVFDRVPERNVVSWTSMLSGSIQNGIAEEGLVL 210
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
F +MR V P+E T+ SV+++ LGG+ + R +HG VIK + IS +LL+MY
Sbjct: 211 FNEMRQDNVHPSEYTMVSVLAACAMLGGLHQGRWIHGSVIKYGLSTNSFISASLLDMYAK 270
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
C VE AR +F+ + D+V W MI GY
Sbjct: 271 CEK-------------------------------VEDARRVFDELEFVDIVLWTAMIVGY 299
Query: 263 LQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD 322
Q +R +AL ++ I PN V I +ISA + G +H+I VK G D
Sbjct: 300 TQNKRPLDALQLFLHKKFVSIVPNSVTIATVISASAQLRHLPLGRSVHAIGVKLGTMESD 359
Query: 323 FIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKR 382
++ ++ YA C + +A +F + +
Sbjct: 360 VVRNALVDMYAKCQ-------------------------------ALPEANSIFGRILIK 388
Query: 383 DVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAH 442
DV +W++M++GY++N N +L LF+ M G+ P+ I++V+ A L G+ H
Sbjct: 389 DVVAWNSMMAGYSENGMANESLVLFNRMRMQGISPDAISVVNALSACVCLADLHIGKGFH 448
Query: 443 EYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGD 502
Y + + N ++ A++++Y+KC + +A VF + DR + W+A+I G M GD
Sbjct: 449 TYAIKYAFMSNIYVNTALLNLYSKCADLPSAQRVFNDMTDRNSVT--WSAMIGGYGMQGD 506
Query: 503 ANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYG 562
+ ++ +++++ K NI N + F +LS C H G+V G+ YF SM +N+ P +KHY
Sbjct: 507 SAGSIDLFNEMLKENIHPNEVVFTSILSACSHTGMVTAGKEYFDSMARHFNITPSMKHYA 566
Query: 563 CMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPS 622
CMVD++ RAG LE+A E I++MP+KA + +WG+ L ++H +E GE A K +A L P
Sbjct: 567 CMVDVMARAGNLEEALEFIQNMPIKAGISVWGSFLHGCKLHSRLEFGEEAIKKMAALHPE 626
Query: 623 HGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
VL+SN+Y GRW+ + +IR+ M++ G+ +LPG S V
Sbjct: 627 TPDFYVLMSNLYTSYGRWDKSQTIRRWMQEQGLVKLPGCSSV 668
Score = 163 bits (413), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 134/588 (22%), Positives = 251/588 (42%), Gaps = 135/588 (22%)
Query: 9 VFNSQKA-NLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINL 67
+FN + N+ S+Y +VS L C+ + QG+ IH + K GL +N+FI SL+++
Sbjct: 210 LFNEMRQDNVHPSEY--TMVSVLAACAMLGGLHQGRWIHGSVIKYGLSTNSFISASLLDM 267
Query: 68 YAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMI 127
YAKC +++ DAR VFD+ V +T+MI
Sbjct: 268 YAKC-------------------------------EKVEDARRVFDELEFVDIVLWTAMI 296
Query: 128 MGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMID 187
+G+ QN +AL++F + + ++PN VT+A+VIS+S L + R +H + +KL
Sbjct: 297 VGYTQNKRPLDALQLFLHKKFVSIVPNSVTIATVISASAQLRHLPLGRSVHAIGVKLGTM 356
Query: 188 GFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERI 247
++ L++MY C +L EA S+F + +++V+WN M+ G+++ G+
Sbjct: 357 ESDVVRNALVDMYAKCQALPEANSIFGRILIKDVVAWNSMMAGYSENGMA---------- 406
Query: 248 PSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGL 307
+E+L ++ M GI+P+ + +V+ +SAC G
Sbjct: 407 ---------------------NESLVLFNRMRMQGISPDAISVVNALSACVCLADLHIGK 445
Query: 308 QIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNG 367
H+ +K F ++ +++ Y+ C + A+ F + +W+A+I G+ G
Sbjct: 446 GFHTYAIKYAFMSNIYVNTALLNLYSKCADLPSAQRVFNDMTDRNSVTWSAMIGGYGMQG 505
Query: 368 MIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFC 427
+ LFN M K +++ PNE+ S+
Sbjct: 506 DSAGSIDLFNEMLKENIH-------------------------------PNEVVFTSILS 534
Query: 428 AIASSGTLKEGRWAHEYVLNN-SITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTS 486
A + +G + G+ + + + +IT + A ++D+ A+ G++ A E ++ +
Sbjct: 535 ACSHTGMVTAGKEYFDSMARHFNITPSMKHYACMVDVMARAGNLEEALEFIQNMPIK-AG 593
Query: 487 VSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFK 546
+S W + + G K++S LE GE K
Sbjct: 594 ISVWGSFLHG----------CKLHSRLE-------------------------FGEEAIK 618
Query: 547 SMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWG 594
M +++ PD Y M +L G+ + ++ + R M + V + G
Sbjct: 619 KMAALHPETPDF--YVLMSNLYTSYGRWDKSQTIRRWMQEQGLVKLPG 664
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 97/374 (25%), Positives = 174/374 (46%), Gaps = 38/374 (10%)
Query: 227 MLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAML--CDGIA 284
+L+ +A G + AR + + P D ++ M+ + ++A+ ++R M C A
Sbjct: 61 LLSCYAALGDLASARGVLDGTPRPDAYAYRVMLGWLVDAGSHADAVALHRDMRRRCPAAA 120
Query: 285 PNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQ 344
DV++ + AC R+ F G ++H +VKAG F+ +++ YA G + AR
Sbjct: 121 QADVVLSLALKACVRSADFRYGRRLHCDVVKAG-GADGFVMNSLVDMYAKAGDLENARKV 179
Query: 345 FELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMAL 404
F+ + ++ SW ++++G I+NG+ E+ LFN M++ +V+
Sbjct: 180 FDRVPERNVVSWTSMLSGSIQNGIAEEGLVLFNEMRQDNVH------------------- 220
Query: 405 ELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMY 464
P+E TMVSV A A G L +GRW H V+ ++ N +SA+++DMY
Sbjct: 221 ------------PSEYTMVSVLAACAMLGGLHQGRWIHGSVIKYGLSTNSFISASLLDMY 268
Query: 465 AKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSIT 524
AKC + A VF + + W A+I G + L+++ + +I NS+T
Sbjct: 269 AKCEKVEDARRVFDEL--EFVDIVLWTAMIVGYTQNKRPLDALQLFLHKKFVSIVPNSVT 326
Query: 525 FIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSM 584
V+S + LG + +E D+ +VD+ + L +A + +
Sbjct: 327 IATVISASAQLRHLPLGRSVHAIGVKLGTMESDVVR-NALVDMYAKCQALPEANSIFGRI 385
Query: 585 PMKADVVIWGTLLA 598
+K DVV W +++A
Sbjct: 386 LIK-DVVAWNSMMA 398
>gi|224082560|ref|XP_002306741.1| predicted protein [Populus trichocarpa]
gi|222856190|gb|EEE93737.1| predicted protein [Populus trichocarpa]
Length = 509
Score = 335 bits (858), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 168/433 (38%), Positives = 263/433 (60%), Gaps = 4/433 (0%)
Query: 232 AKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAML--CDGIAPNDVM 289
+ AG + A +F +I + ++ W T+I G+ Q A++++ M+ P +
Sbjct: 40 SPAGDINYAYLVFTQIRNPNLFVWNTIIRGFSQSSTPHNAISLFIDMMFTSPTTQPQRLT 99
Query: 290 IVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGI 349
+ A + EG Q+H ++K G + FIQ TI++ Y CG + A+ F+
Sbjct: 100 YPSVFKAYAQLGLAHEGAQLHGRVIKLGLENDQFIQNTILNMYVNCGFLGEAQRIFDGAT 159
Query: 350 KDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHG 409
+ +WN +I G + G I+ +R+LF+ M R+ SW++MISGY + + A+ELF
Sbjct: 160 GFDVVTWNTMIIGLAKCGEIDKSRRLFDKMLLRNTVSWNSMISGYVRKGRFFEAMELFSR 219
Query: 410 MVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGS 469
M + G+KP+E TMVS+ A A G L++G W H+Y++ N+ LN + AIIDMY+KCGS
Sbjct: 220 MQEEGIKPSEFTMVSLLNACACLGALRQGEWIHDYIVKNNFALNSIVITAIIDMYSKCGS 279
Query: 470 INTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVL 529
I+ A +VF + +S WN++I GLAM G N ++++S LE N+K + ++FIGVL
Sbjct: 280 IDKALQVFKSAPKK--GLSCWNSLILGLAMSGRGNEAVRLFSKLESSNLKPDHVSFIGVL 337
Query: 530 STCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKAD 589
+ C HAG+VD + YF M Y +EP +KHY CMVD+LGRAG LE+AEE+I+SMP+ D
Sbjct: 338 TACNHAGMVDRAKDYFLLMSETYKIEPSIKHYSCMVDVLGRAGLLEEAEELIKSMPVNPD 397
Query: 590 VVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKE 649
+IWG+LL++ R +GN+E+ ++AAK + L P+ S +LLSN+YA +E+A R
Sbjct: 398 AIIWGSLLSSCREYGNIEMAKQAAKRVNELDPNESSSFILLSNVYAAHNHFEEAIEQRLS 457
Query: 650 MRDCGMKRLPGFS 662
+++ M + PG S
Sbjct: 458 LKEKQMDKEPGCS 470
Score = 159 bits (403), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 114/398 (28%), Positives = 186/398 (46%), Gaps = 46/398 (11%)
Query: 105 LNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVI--PNEVTLASVI 162
+N A VF + + ++I GF+Q+ A+ +F DM P +T SV
Sbjct: 45 INYAYLVFTQIRNPNLFVWNTIIRGFSQSSTPHNAISLFIDMMFTSPTTQPQRLTYPSVF 104
Query: 163 SSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIV 222
+ LG E LHG VIKL ++ I +LNMY C L EA+ +FD ++V
Sbjct: 105 KAYAQLGLAHEGAQLHGRVIKLGLENDQFIQNTILNMYVNCGFLGEAQRIFDGATGFDVV 164
Query: 223 SWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDG 282
+WN M+ G AK G ++ +R LF+++ ++ VSW +MI GY++ R EA+ ++ M +G
Sbjct: 165 TWNTMIIGLAKCGEIDKSRRLFDKMLLRNTVSWNSMISGYVRKGRFFEAMELFSRMQEEG 224
Query: 283 IAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLAR 342
I P++ +V L++AC A +G IH IVK F + II Y+ CG I+ A
Sbjct: 225 IKPSEFTMVSLLNACACLGALRQGEWIHDYIVKNNFALNSIVITAIIDMYSKCGSIDKAL 284
Query: 343 LQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNM 402
F+ K ++ WN+LI G +G + N
Sbjct: 285 QVFKSAPKKGLSCWNSLILGLAMSG-------------------------------RGNE 313
Query: 403 ALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLS----A 458
A+ LF + + +KP+ ++ + V A +G + A +Y L S T S +
Sbjct: 314 AVRLFSKLESSNLKPDHVSFIGVLTACNHAGMVDR---AKDYFLLMSETYKIEPSIKHYS 370
Query: 459 AIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICG 496
++D+ + G + A E+ ++ V+P +AII G
Sbjct: 371 CMVDVLGRAGLLEEAEELI-----KSMPVNP-DAIIWG 402
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 131/244 (53%), Gaps = 4/244 (1%)
Query: 9 VFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLY 68
+F S Q Y + + AH +G Q+H + K GLE++ FIQN+++N+Y
Sbjct: 87 MFTSPTTQPQRLTYPSVFKAYAQLGLAH----EGAQLHGRVIKLGLENDQFIQNTILNMY 142
Query: 69 AKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIM 128
CG + +A+ +FD + D V N MI G + ++ +R +FDK ++ VS+ SMI
Sbjct: 143 VNCGFLGEAQRIFDGATGFDVVTWNTMIIGLAKCGEIDKSRRLFDKMLLRNTVSWNSMIS 202
Query: 129 GFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDG 188
G+ + + EA+E+F M+ G+ P+E T+ S++++ LG + + +H ++K
Sbjct: 203 GYVRKGRFFEAMELFSRMQEEGIKPSEFTMVSLLNACACLGALRQGEWIHDYIVKNNFAL 262
Query: 189 FVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIP 248
I+ T +++MY C S+ +A +F ++ + WN ++ G A +G A LF ++
Sbjct: 263 NSIVITAIIDMYSKCGSIDKALQVFKSAPKKGLSCWNSLILGLAMSGRGNEAVRLFSKLE 322
Query: 249 SKDV 252
S ++
Sbjct: 323 SSNL 326
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 101/238 (42%), Gaps = 62/238 (26%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E +VS L C+ A+ QG+ IH I K+ N+ + ++I++Y+KCG I +A
Sbjct: 229 EFTMVSLLNACACLGALRQGEWIHDYIVKNNFALNSIVITAIIDMYSKCGSIDKA----- 283
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+VF P K + S+I+G A + EA+ +
Sbjct: 284 --------------------------LQVFKSAPKKGLSCWNSLILGLAMSGRGNEAVRL 317
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
F + + P+ V+ V+++ H G + + D F+++S Y +
Sbjct: 318 FSKLESSNLKPDHVSFIGVLTACNHAGMVDRAK-----------DYFLLMSET----YKI 362
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIP-SKDVVSWGTMI 259
E +I ++ M++ +AGL+E A EL + +P + D + WG+++
Sbjct: 363 ---------------EPSIKHYSCMVDVLGRAGLLEEAEELIKSMPVNPDAIIWGSLL 405
>gi|326504202|dbj|BAJ90933.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 634
Score = 335 bits (858), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 192/576 (33%), Positives = 302/576 (52%), Gaps = 34/576 (5%)
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
VA +SG + L AR +FD+ P +Y S+I ++ + C +EAL + RD+
Sbjct: 42 VASYCALSGRAGDVALCHARRMFDRVPDPDRFAYNSLIRAYSNSGCPQEALCLHRDVLRR 101
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
G++PNE TL V+ + HG+ IKL G+V
Sbjct: 102 GILPNEFTLPFVLKACSRARAAEHALATHGVAIKL---GYV------------------- 139
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELF-ERIPSKDVVSWGTMIDGYLQVERL 268
R + N +L+ A AG + +R LF E P ++VVSW TMI G Q
Sbjct: 140 ---------RQVFVGNALLHSSASAGSLRDSRRLFAEMAPHRNVVSWNTMIGGCAQAGET 190
Query: 269 SEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATI 328
SEA ++R M G+ + V L+ C + G +H ++ +G + +
Sbjct: 191 SEACALFREMRRQGVLADVFTFVSLLLVCSKEGNLEVGRLVHCHMLASGSRVDLILGNAL 250
Query: 329 IHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWS 388
+ Y CG + +A F++ ++ SW +++ ++G ++ AR F M +R++ SW+
Sbjct: 251 VDMYGKCGDLWMAHRCFDVMPIKNVVSWTSMLCALAKHGSVDAARDWFEQMPERNIISWN 310
Query: 389 AMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNN 448
AMIS Y Q + L L++ M G+ P+E+T+ V +G L GR H Y+ ++
Sbjct: 311 AMISCYVQGGRFPETLGLYNRMKSLGLTPDEVTLAGVLSVHGQNGDLASGRMIHCYIQDS 370
Query: 449 SITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLK 508
+ ++IDMYA+CG ++T+ +F + ++ T WN II LAMHG A +
Sbjct: 371 FSDPGVTVLNSLIDMYARCGQVDTSISLFTEMPNKNTI--SWNVIIGALAMHGRAQEAVM 428
Query: 509 IYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLL 568
+ + + ITF+G+LS C H GL++ G+ YFK+M+ +YNV+P+++HY CMVDLL
Sbjct: 429 FFRAMVSDAFSPDEITFVGLLSACSHGGLLEDGQYYFKAMRHIYNVKPEVEHYACMVDLL 488
Query: 569 GRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRV 628
GR G L A ++I+ MPMK DVV+WG L+ A RIHG+VE+G+ A K L L+ +G V
Sbjct: 489 GRHGHLAKAVDLIKDMPMKPDVVVWGALIGACRIHGHVEIGKLAIKQLLELEGINGGLFV 548
Query: 629 LLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
L+SN+ + +WED +RK MRD G K+ G S +
Sbjct: 549 LISNLLYETRQWEDMKRLRKLMRDRGTKKDMGVSSI 584
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 91/369 (24%), Positives = 157/369 (42%), Gaps = 62/369 (16%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
VS L CS + G+ +H + SG + + N+L+++Y KCG + A FD
Sbjct: 210 FTFVSLLLVCSKEGNLEVGRLVHCHMLASGSRVDLILGNALVDMYGKCGDLWMAHRCFDV 269
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
+ V+ M+ ++ ++ AR+ F++ P + +S+ +MI + Q + E L ++
Sbjct: 270 MPIKNVVSWTSMLCALAKHGSVDAARDWFEQMPERNIISWNAMISCYVQGGRFPETLGLY 329
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
M+ LG+ P+EVTLA V+S G + RM+H + D V + +L++MY C
Sbjct: 330 NRMKSLGLTPDEVTLAGVLSVHGQNGDLASGRMIHCYIQDSFSDPGVTVLNSLIDMYARC 389
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYL 263
+ + SLF EM +N +SWNV++ A G
Sbjct: 390 GQVDTSISLFTEMPNKNTISWNVIIGALAMHG---------------------------- 421
Query: 264 QVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDF 323
R EA+ +RAM+ D +P+++ V L+SAC +G +
Sbjct: 422 ---RAQEAVMFFRAMVSDAFSPDEITFVGLLSACSHGGLLEDG---------------QY 463
Query: 324 IQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ-KR 382
+ H Y +K + + ++ R+G + A L +M K
Sbjct: 464 YFKAMRHIY---------------NVKPEVEHYACMVDLLGRHGHLAKAVDLIKDMPMKP 508
Query: 383 DVYSWSAMI 391
DV W A+I
Sbjct: 509 DVVVWGALI 517
Score = 47.0 bits (110), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 61/289 (21%), Positives = 117/289 (40%), Gaps = 46/289 (15%)
Query: 9 VFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLY 68
++N K+ D E+ L L + ++ G+ IH I S + + NSLI++Y
Sbjct: 328 LYNRMKSLGLTPD-EVTLAGVLSVHGQNGDLASGRMIHCYIQDSFSDPGVTVLNSLIDMY 386
Query: 69 AKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIM 128
A+CG + + S+ F + P K +S+ +I
Sbjct: 387 ARCGQVDTSISL-------------------------------FTEMPNKNTISWNVIIG 415
Query: 129 GFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWE------CRMLHGLVI 182
A + +EA+ FR M P+E+T ++S+ H GG+ E M H +
Sbjct: 416 ALAMHGRAQEAVMFFRAMVSDAFSPDEITFVGLLSACSH-GGLLEDGQYYFKAMRHIYNV 474
Query: 183 KLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKER-NIVSWNVMLNGFAKAGLVELAR 241
K ++ + + +LL + L +A L +M + ++V W ++ G VE+ +
Sbjct: 475 KPEVEHYACM-VDLLGRH---GHLAKAVDLIKDMPMKPDVVVWGALIGACRIHGHVEIGK 530
Query: 242 ELFERIPSKDVVSWG--TMIDGYLQVERLSEALTMYRAMLCDGIAPNDV 288
+++ + ++ G +I L R E + R ++ D D+
Sbjct: 531 LAIKQLLELEGINGGLFVLISNLLYETRQWEDMKRLRKLMRDRGTKKDM 579
>gi|359474320|ref|XP_002270938.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g22760-like [Vitis vinifera]
Length = 580
Score = 334 bits (857), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 211/636 (33%), Positives = 344/636 (54%), Gaps = 85/636 (13%)
Query: 37 IAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMI 96
++V Q +Q+H+LI GL + L + A+ LIS + + +
Sbjct: 15 LSVKQAKQVHALILIHGL-------SHLEPILARQILISASNY-------------SATV 54
Query: 97 SGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEV 156
+ Y+ + L+ ++ D C + +++ Q+ ++EA ++ M+ G+ P
Sbjct: 55 AQYVHS-VLHHSKSP-DSFSWACAIRFST------QHGQFKEAFALYVQMQRWGLCPTTF 106
Query: 157 TLASVISS----SVHLGGIWECRMLHGLVIKLMI----DGFVIISTNLLNMYCVCSSLVE 208
L+S + + + +GGI +HG V K DG + + T L++ YC +
Sbjct: 107 ALSSALKACARIAYRMGGI----SIHGQVQKFGFSCGGDG-IYVETALVDFYCKLGDMEI 161
Query: 209 ARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERL 268
AR +FDEM ERN+VSWN ML G+ K+G + +A+ +F+ IP KDV+SW +MI GY + +
Sbjct: 162 ARKMFDEMAERNVVSWNSMLAGYLKSGDLVVAQRVFDEIPQKDVISWNSMISGYARAGDM 221
Query: 269 SEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATI 328
+A ++++ M A + MI + FG+
Sbjct: 222 EKASSLFQQMPERNFASWNAMISGHVE-------FGD----------------------- 251
Query: 329 IHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWS 388
I+ AR F+ + + SW +I+G+ + G ++ A +LF+ + +D+ ++
Sbjct: 252 ---------IDSARSFFDAMPQKNNVSWMTMISGYSKCGDVDSACELFDQVGGKDLLLFN 302
Query: 389 AMISGYAQNEQPNMALELFHGMVDA--GVKPNEITMVSVFCAIASSGTLKEGRWAHEYVL 446
AMI+ YAQN +PN AL LF+ M++ V+P+E+T+ SV A + G L+ G W Y+
Sbjct: 303 AMIACYAQNSRPNEALNLFNNMLNPYVNVQPDEMTLASVISACSQLGDLRFGPWIESYMR 362
Query: 447 NNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLT 506
I ++ +L+ A++D+YAKCGSI+ A+E+F+ +R + + + A+I G ++G A
Sbjct: 363 RLGIEMDGHLATALLDLYAKCGSIDKAYELFHGLRKK--DLVAYTAMILGCGINGKAIDA 420
Query: 507 LKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVD 566
+K++ ++ I NSITFIG+L+ HAGLV+ G R F SMK YN+ P + HYG MVD
Sbjct: 421 IKLFDEMVDAQIFPNSITFIGLLTAYNHAGLVEEGYRCFTSMKK-YNLVPSVDHYGIMVD 479
Query: 567 LLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPS 626
L GRAG+L++A E+I+SMPM+ +WG LL A R+H NVE GE AA+ L+P
Sbjct: 480 LFGRAGRLQEALELIKSMPMQPHAGVWGALLLACRLHNNVEFGEIAAQHCFELEPDTTGY 539
Query: 627 RVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
R LLSNIYA RW+D +RK ++ G ++PG S
Sbjct: 540 RSLLSNIYASGERWDDVKRLRKVTKEKGFSKIPGCS 575
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 128/494 (25%), Positives = 225/494 (45%), Gaps = 90/494 (18%)
Query: 24 LALVSALRYCSAHIAVSQGQ-QIHSLIFKSGLE---SNTFIQNSLINLYAKCGLISQAKS 79
AL SAL+ C A IA G IH + K G +++ +L++ Y K G + A+
Sbjct: 106 FALSSALKAC-ARIAYRMGGISIHGQVQKFGFSCGGDGIYVETALVDFYCKLGDMEIARK 164
Query: 80 MFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREA 139
MFD + + V+ N M++GY+++ L A+ VFD+ P K +S+ SMI G+A+ +A
Sbjct: 165 MFDEMAERNVVSWNSMLAGYLKSGDLVVAQRVFDEIPQKDVISWNSMISGYARAGDMEKA 224
Query: 140 LEVFRDMRILGVIP--NEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLL 197
+F+ M P N + ++IS V G I
Sbjct: 225 SSLFQQM------PERNFASWNAMISGHVEFGDI-------------------------- 252
Query: 198 NMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGT 257
ARS FD M ++N VSW M++G++K G V+ A ELF+++ KD++ +
Sbjct: 253 ---------DSARSFFDAMPQKNNVSWMTMISGYSKCGDVDSACELFDQVGGKDLLLFNA 303
Query: 258 MIDGYLQVERLSEALTMYRAMLCD--GIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVK 315
MI Y Q R +EAL ++ ML + P+++ + +ISAC + G I S + +
Sbjct: 304 MIACYAQNSRPNEALNLFNNMLNPYVNVQPDEMTLASVISACSQLGDLRFGPWIESYMRR 363
Query: 316 AGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQL 375
G + + ++ YA CG I+ A +L
Sbjct: 364 LGIEMDGHLATALLDLYAKCGS-------------------------------IDKAYEL 392
Query: 376 FNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTL 435
F+ ++K+D+ +++AMI G N + A++LF MVDA + PN IT + + A +G +
Sbjct: 393 FHGLRKKDLVAYTAMILGCGINGKAIDAIKLFDEMVDAQIFPNSITFIGLLTAYNHAGLV 452
Query: 436 KEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSP----WN 491
+EG + ++ + + ++D++ + G + A E+ ++ + P W
Sbjct: 453 EEGYRCFTSMKKYNLVPSVDHYGIMVDLFGRAGRLQEALELI-----KSMPMQPHAGVWG 507
Query: 492 AIICGLAMHGDANL 505
A++ +H +
Sbjct: 508 ALLLACRLHNNVEF 521
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 62/136 (45%), Gaps = 4/136 (2%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E+ L S + CS + G I S + + G+E + + +L++LYAKCG I +A +F
Sbjct: 335 EMTLASVISACSQLGDLRFGPWIESYMRRLGIEMDGHLATALLDLYAKCGSIDKAYELFH 394
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTP----IKCCVSYTSMIMGFAQNDCWRE 138
D VA MI G N + DA ++FD+ +++ ++ + E
Sbjct: 395 GLRKKDLVAYTAMILGCGINGKAIDAIKLFDEMVDAQIFPNSITFIGLLTAYNHAGLVEE 454
Query: 139 ALEVFRDMRILGVIPN 154
F M+ ++P+
Sbjct: 455 GYRCFTSMKKYNLVPS 470
>gi|125572419|gb|EAZ13934.1| hypothetical protein OsJ_03861 [Oryza sativa Japonica Group]
Length = 1031
Score = 334 bits (857), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 183/558 (32%), Positives = 306/558 (54%), Gaps = 35/558 (6%)
Query: 108 AREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVH 167
A +VFD+ + +I G AQ+D +A+ ++ + G++P+ +T ++ +
Sbjct: 505 AHKVFDQIEAPTTFLWNILIRGLAQSDAPADAIAFYKKAQGGGMVPDNLTFPFILKACAR 564
Query: 168 LGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVM 227
+ + E +H + KL + + +S +L+++Y C +L ARS+
Sbjct: 565 INALNEGEQMHNHITKLGLLSDIFVSNSLIHLYAACGNLCYARSV--------------- 609
Query: 228 LNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPND 287
F+ + KDVVSW ++I GY Q R + L +++ M +G+ +
Sbjct: 610 ----------------FDEMVVKDVVSWNSLICGYSQCNRFKDILALFKLMQNEGVKADK 653
Query: 288 VMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLA-RLQFE 346
V ++ ++SAC R + + I + ++ T++ ++ G++ A ++ F
Sbjct: 654 VTMIKVVSACTRLGDYSMADYMVRYIEDYCIEVDVYLGNTLVDYFGRRGQLQSAEKVFFN 713
Query: 347 LGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALEL 406
+ +++ I + NA+IA + + I AR++F+ + K+D+ SWS+MISGY+Q + ALE+
Sbjct: 714 MKVRN-IVTMNAMIAAYAKGQDIVSARKIFDQIPKKDLISWSSMISGYSQANHFSDALEI 772
Query: 407 FHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAK 466
F M A VKP+ I + SV + A G L G+W HEYV N+I + + ++IDMY K
Sbjct: 773 FRQMQRAKVKPDAIVIASVVSSCAHLGALDLGKWVHEYVRRNNIKADTIMENSLIDMYMK 832
Query: 467 CGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFI 526
CGS A +VF ++++ T WN+II GLA +G +L ++ + + N +TF+
Sbjct: 833 CGSAKEALQVFKEMKEKDTL--SWNSIIIGLANNGFEKESLNLFQAMLTEGFRPNGVTFL 890
Query: 527 GVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPM 586
GVL C +A LV+ G +F+SMK +Y++EP +KHYGC+VDLLGRAGQLE A I MP+
Sbjct: 891 GVLIACANAKLVEEGLDHFESMKRLYSLEPQMKHYGCVVDLLGRAGQLEKALRFITEMPI 950
Query: 587 KADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSI 646
D V+W LL + HG+V + E K L L+PS+ + LLSN YA A RW +A ++
Sbjct: 951 DPDPVVWRILLGSCNTHGDVAIAEIVTKKLNELEPSNSGNYTLLSNAYASAHRWSEAMNV 1010
Query: 647 RKEMRDCGMKRLPGFSGV 664
R+ M D +++ PG S V
Sbjct: 1011 RQCMADTDVRKSPGCSAV 1028
Score = 271 bits (692), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 143/410 (34%), Positives = 230/410 (56%), Gaps = 6/410 (1%)
Query: 239 LARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACG 298
+A ++F+R P+ W ++ Y +AL ++R A + + AC
Sbjct: 46 IAHQVFDRRPT----PWHALLKAYSHGPHPQDALQLFRHARWHA-ADDTYAFTFALKACA 100
Query: 299 RAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNA 358
+Q+H ++V+ GF+ ++ +++ Y CG + +R+ FE + SWN
Sbjct: 101 GLGWPRCCMQLHGLVVRKGFEFQTYVHTALVNVYILCGCLADSRMAFEEMPVKNAVSWNV 160
Query: 359 LIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPN 418
+I GF G +E AR LF M R+V SWS MI GY + +P A+ LF M+ G+ P+
Sbjct: 161 VITGFAGWGEVEYARLLFERMPCRNVVSWSGMIDGYTRACRPVEAVALFRRMMAEGISPS 220
Query: 419 EITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFY 478
EIT+++V A+++ G + G H Y + + + ++ID+YAK GSI + VF
Sbjct: 221 EITVLAVVPALSNVGKILIGEALHGYCEKEGLVWDVRVGNSLIDLYAKIGSIQNSLRVFD 280
Query: 479 HIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLV 538
+ DR VS W +II G AMHG + +++++D+ + I+ N ITF+ VL C H GLV
Sbjct: 281 EMLDRRNLVS-WTSIISGFAMHGLSVKAVELFADMRRAGIRPNRITFLSVLHACSHGGLV 339
Query: 539 DLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLA 598
+ G +FKSM YN+ PD+KH+GC++D+LGRAG+L +AE++IR P++ + +W TLL
Sbjct: 340 EQGVAFFKSMIYEYNINPDVKHFGCIIDMLGRAGRLREAEQIIRDFPVEVNATVWRTLLG 399
Query: 599 ASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRK 648
+G VE+GER K + L+ G V+LSN+ + R+ DA +RK
Sbjct: 400 CCSKYGEVEMGERTMKKILALEREFGGDFVVLSNMLTELRRFSDAEIVRK 449
Score = 178 bits (451), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 132/496 (26%), Positives = 226/496 (45%), Gaps = 75/496 (15%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
L+ C+ A+++G+Q+H+ I K GL S+ F+ NSLI+LYA CG
Sbjct: 559 LKACARINALNEGEQMHNHITKLGLLSDIFVSNSLIHLYAACG----------------- 601
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
L AR VFD+ +K VS+ S+I G++Q + +++ L +F+ M+
Sbjct: 602 --------------NLCYARSVFDEMVVKDVVSWNSLICGYSQCNRFKDILALFKLMQNE 647
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
GV ++VT+ V+S+ LG + + I+ V + L++ + L A
Sbjct: 648 GVKADKVTMIKVVSACTRLGDYSMADYMVRYIEDYCIEVDVYLGNTLVDYFGRRGQLQSA 707
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLS 269
+F MK RNIV+ N M+ +AK + AR++F++IP KD++SW +MI GY Q S
Sbjct: 708 EKVFFNMKVRNIVTMNAMIAAYAKGQDIVSARKIFDQIPKKDLISWSSMISGYSQANHFS 767
Query: 270 EALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATII 329
+AL ++R M + P+ ++I ++S+C A G +H + + ++ ++I
Sbjct: 768 DALEIFRQMQRAKVKPDAIVIASVVSSCAHLGALDLGKWVHEYVRRNNIKADTIMENSLI 827
Query: 330 HFYAACGRINLARLQF-ELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWS 388
Y CG A F E+ KD + SWN++I G NG ++
Sbjct: 828 DMYMKCGSAKEALQVFKEMKEKDTL-SWNSIIIGLANNGFEKE----------------- 869
Query: 389 AMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNN 448
+L LF M+ G +PN +T + V A A++ ++EG H +
Sbjct: 870 --------------SLNLFQAMLTEGFRPNGVTFLGVLIACANAKLVEEG-LDHFESMKR 914
Query: 449 SITLNDNLS--AAIIDMYAKCGSINTAFEVFYHIRDRTTSVSP--WNAIICGLAMHGD-- 502
+L + ++D+ + G + A I + P W ++ HGD
Sbjct: 915 LYSLEPQMKHYGCVVDLLGRAGQLEKALRF---ITEMPIDPDPVVWRILLGSCNTHGDVA 971
Query: 503 -ANLTLKIYSDLEKRN 517
A + K ++LE N
Sbjct: 972 IAEIVTKKLNELEPSN 987
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 117/419 (27%), Positives = 203/419 (48%), Gaps = 54/419 (12%)
Query: 108 AREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVH 167
A +VFD+ P + +++ ++ ++AL++FR R + + +
Sbjct: 47 AHQVFDRRP----TPWHALLKAYSHGPHPQDALQLFRHAR-WHAADDTYAFTFALKACAG 101
Query: 168 LGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVM 227
LG C LHGLV++ + + T L+N+Y +C L ++R F+EM +N VSWNV+
Sbjct: 102 LGWPRCCMQLHGLVVRKGFEFQTYVHTALVNVYILCGCLADSRMAFEEMPVKNAVSWNVV 161
Query: 228 LNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPND 287
+ GFA G VE AR LFER+P ++VVSW MIDGY + R EA+ ++R M+ +GI+P++
Sbjct: 162 ITGFAGWGEVEYARLLFERMPCRNVVSWSGMIDGYTRACRPVEAVALFRRMMAEGISPSE 221
Query: 288 VMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRI-NLARLQFE 346
+ ++ ++ A G +H K G + ++I YA G I N R+ E
Sbjct: 222 ITVLAVVPALSNVGKILIGEALHGYCEKEGLVWDVRVGNSLIDLYAKIGSIQNSLRVFDE 281
Query: 347 LGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALEL 406
+ + ++ SW ++I+GF +G+ A +LF +M++
Sbjct: 282 MLDRRNLVSWTSIISGFAMHGLSVKAVELFADMRR------------------------- 316
Query: 407 FHGMVDAGVKPNEITMVSVFCAIASSGTLKEG-----RWAHEYVLNNSITLNDNLSAAII 461
AG++PN IT +SV A + G +++G +EY +N + II
Sbjct: 317 ------AGIRPNRITFLSVLHACSHGGLVEQGVAFFKSMIYEYNINPDV----KHFGCII 366
Query: 462 DMYAKCGSINTAFEVFYHIRDRTTSVSP--WNAIICGLAMHGDANL---TLKIYSDLEK 515
DM + G + A ++ IRD V+ W ++ + +G+ + T+K LE+
Sbjct: 367 DMLGRAGRLREAEQI---IRDFPVEVNATVWRTLLGCCSKYGEVEMGERTMKKILALER 422
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 134/596 (22%), Positives = 251/596 (42%), Gaps = 60/596 (10%)
Query: 13 QKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCG 72
+ A +D A AL+ C+ Q+H L+ + G E T++ +L+N+Y CG
Sbjct: 79 RHARWHAADDTYAFTFALKACAGLGWPRCCMQLHGLVVRKGFEFQTYVHTALVNVYILCG 138
Query: 73 LISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQ 132
++ ++ F+ + V+ N++I+G+ + AR +F++ P + VS++ MI G+ +
Sbjct: 139 CLADSRMAFEEMPVKNAVSWNVVITGFAGWGEVEYARLLFERMPCRNVVSWSGMIDGYTR 198
Query: 133 NDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVII 192
EA+ +FR M G+ P+E+T+ +V+ + ++G I LHG K + V +
Sbjct: 199 ACRPVEAVALFRRMMAEGISPSEITVLAVVPALSNVGKILIGEALHGYCEKEGLVWDVRV 258
Query: 193 STNLLNMYCVCSSLVEARSLFDEM-KERNIVSWNVMLNGFAKAGLVELARELFERIPSKD 251
+L+++Y S+ + +FDEM RN+VSW +++GFA GL A ELF
Sbjct: 259 GNSLIDLYAKIGSIQNSLRVFDEMLDRRNLVSWTSIISGFAMHGLSVKAVELFA------ 312
Query: 252 VVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHS 311
M RA GI PN + + ++ AC +G+
Sbjct: 313 ---------------------DMRRA----GIRPNRITFLSVLHACSHGGLVEQGVAFFK 347
Query: 312 IIVKAGFDCYDF-IQATIIHF------YAACGRINLA-RLQFELGIKDHIASWNALIAGF 363
++ Y++ I + HF GR+ A ++ + ++ + W L+
Sbjct: 348 SMI------YEYNINPDVKHFGCIIDMLGRAGRLREAEQIIRDFPVEVNATVWRTLLGCC 401
Query: 364 IRNGMIEDARQLFNNM--QKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEIT 421
+ G +E + + +R+ ++S + E+ +VD +
Sbjct: 402 SKYGEVEMGERTMKKILALEREFGGDFVVLSNMLTELRRFSDAEIVRKLVD------QRN 455
Query: 422 MVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIR 481
V F I +K R Y+++ + +S + + A +VF I
Sbjct: 456 SVKSFFNIVRMEAIK--RLHAYYIVSGLYNCHYAMSKVLRSYAILQPDLVFAHKVFDQIE 513
Query: 482 DRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLG 541
TT + WN +I GLA + Y + + +++TF +L C ++ G
Sbjct: 514 APTTFL--WNILIRGLAQSDAPADAIAFYKKAQGGGMVPDNLTFPFILKACARINALNEG 571
Query: 542 ERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLL 597
E+ + + + D+ ++ L G L A V M +K DVV W +L+
Sbjct: 572 EQMHNHITKL-GLLSDIFVSNSLIHLYAACGNLCYARSVFDEMVVK-DVVSWNSLI 625
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 123/612 (20%), Positives = 239/612 (39%), Gaps = 134/612 (21%)
Query: 51 KSGLESNTFIQNSLINLYAKCGLISQAKSMFDSC---STLDP----VACNIMISGYIRND 103
++G+ N S+++ + GL+ Q + F S ++P C I + G R
Sbjct: 316 RAGIRPNRITFLSVLHACSHGGLVEQGVAFFKSMIYEYNINPDVKHFGCIIDMLG--RAG 373
Query: 104 RLNDAREVFDKTPIK-----------CCVSYTSMIMG-----------------FAQNDC 135
RL +A ++ P++ CC Y + MG F
Sbjct: 374 RLREAEQIIRDFPVEVNATVWRTLLGCCSKYGEVEMGERTMKKILALEREFGGDFVVLSN 433
Query: 136 WREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTN 195
L F D I+ + ++ + V + I + LH I + +
Sbjct: 434 MLTELRRFSDAEIVRKLVDQRNSVKSFFNIVRMEAI---KRLHAYYIVSGLYNCHYAMSK 490
Query: 196 LLNMYCVCSS-LVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVS 254
+L Y + LV A +FD+++ WN+++ G A
Sbjct: 491 VLRSYAILQPDLVFAHKVFDQIEAPTTFLWNILIRGLA---------------------- 528
Query: 255 WGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIV 314
Q + ++A+ Y+ G+ P+++ ++ AC R A EG Q+H+ I
Sbjct: 529 ---------QSDAPADAIAFYKKAQGGGMVPDNLTFPFILKACARINALNEGEQMHNHIT 579
Query: 315 KAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQ 374
K G F+ ++IH YAACG + AR F+ + + SWN+LI G+ + +D
Sbjct: 580 KLGLLSDIFVSNSLIHLYAACGNLCYARSVFDEMVVKDVVSWNSLICGYSQCNRFKDILA 639
Query: 375 LFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGT 434
LF MQ + GVK +++TM+ V A G
Sbjct: 640 LFKLMQ-------------------------------NEGVKADKVTMIKVVSACTRLGD 668
Query: 435 LKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRT---------- 484
+ Y+ + I ++ L ++D + + G + +A +VF++++ R
Sbjct: 669 YSMADYMVRYIEDYCIEVDVYLGNTLVDYFGRRGQLQSAEKVFFNMKVRNIVTMNAMIAA 728
Query: 485 -------------------TSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITF 525
+ W+++I G + + L+I+ +++ +K ++I
Sbjct: 729 YAKGQDIVSARKIFDQIPKKDLISWSSMISGYSQANHFSDALEIFRQMQRAKVKPDAIVI 788
Query: 526 IGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMP 585
V+S+C H G +DLG+ + ++ N++ D ++D+ + G ++A +V + M
Sbjct: 789 ASVVSSCAHLGALDLGKWVHEYVRR-NNIKADTIMENSLIDMYMKCGSAKEALQVFKEMK 847
Query: 586 MKADVVIWGTLL 597
K D + W +++
Sbjct: 848 EK-DTLSWNSII 858
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 54/266 (20%), Positives = 111/266 (41%), Gaps = 48/266 (18%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+ + S + C+ A+ G+ +H + ++ ++++T ++NSLI++Y KCG +
Sbjct: 786 IVIASVVSSCAHLGALDLGKWVHEYVRRNNIKADTIMENSLIDMYMKCGSAKE------- 838
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
A +VF + K +S+ S+I+G A N +E+L +F
Sbjct: 839 ------------------------ALQVFKEMKEKDTLSWNSIIIGLANNGFEKESLNLF 874
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWE-------CRMLHGLVIKLMIDGFVIISTNL 196
+ M G PN VT V+ + + + E + L+ L ++ G V+
Sbjct: 875 QAMLTEGFRPNGVTFLGVLIACANAKLVEEGLDHFESMKRLYSLEPQMKHYGCVV----- 929
Query: 197 LNMYCVCSSLVEARSLFDEMK-ERNIVSWNVML---NGFAKAGLVELARELFERIPSKDV 252
++ L +A EM + + V W ++L N + E+ + + +
Sbjct: 930 -DLLGRAGQLEKALRFITEMPIDPDPVVWRILLGSCNTHGDVAIAEIVTKKLNELEPSNS 988
Query: 253 VSWGTMIDGYLQVERLSEALTMYRAM 278
++ + + Y R SEA+ + + M
Sbjct: 989 GNYTLLSNAYASAHRWSEAMNVRQCM 1014
>gi|224134663|ref|XP_002327460.1| predicted protein [Populus trichocarpa]
gi|222836014|gb|EEE74435.1| predicted protein [Populus trichocarpa]
Length = 540
Score = 334 bits (857), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 175/461 (37%), Positives = 267/461 (57%), Gaps = 5/461 (1%)
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYL 263
S L +L D I+S + N A++ L A LF + +K W TM+ ++
Sbjct: 32 SHLTVTATLKDPYAAAKIISLHAHSN--ARSSLF-YAERLFLCLQNKSTFIWNTMMQAFV 88
Query: 264 QVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDF 323
+ A ++Y+ ML PN+ +I AC GL H +VK G++ YDF
Sbjct: 89 EKNEAVRAFSLYKHMLESNYLPNNFTFSFVIRACIDVFNLQMGLCFHGQVVKFGWESYDF 148
Query: 324 IQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRD 383
+Q +IH YA CG ++LAR F++ IK + +W LI+G++ +G + AR+LF+ M +++
Sbjct: 149 VQNGLIHLYANCGFMDLARNMFDMSIKRDVVTWTCLISGYLNSGQVLIARELFDRMPEKN 208
Query: 384 VYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHE 443
SW A+I+GY + ALE+F+ M +G + N ++V A A G L +GRW H
Sbjct: 209 PVSWGALIAGYVRIGFFKEALEVFYDMQVSGFRLNRASIVGALTACAFLGALDQGRWIHA 268
Query: 444 YVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDA 503
YV + ++L+ L A+IDMYAKCG I A VF + DR V + +I GLA H +
Sbjct: 269 YVKRHHMSLDRMLGTALIDMYAKCGCIEMACSVFDEMDDR--DVYAFTCLISGLANHDKS 326
Query: 504 NLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGC 563
+ +++ ++ + N +TF+ VL+ C G+VD G R F+SM + Y +EP ++HYGC
Sbjct: 327 EAAIDLFNRMQDEGVVPNEVTFVCVLNACSRMGMVDEGLRIFESMSNRYVIEPQIQHYGC 386
Query: 564 MVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSH 623
+VDLLGRAG++E+A++V+R MP++ D G LL A R+HG+V++GE SL H
Sbjct: 387 LVDLLGRAGKIEEAKQVVREMPLQPDSYTLGALLDACRVHGDVQLGEEMVDSLVQRCLDH 446
Query: 624 GPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
G VLLSN+YA A +WEDA IRK+M D +++LPG S +
Sbjct: 447 GGVHVLLSNMYASADKWEDASKIRKKMEDKNIRKLPGCSSI 487
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 118/449 (26%), Positives = 210/449 (46%), Gaps = 39/449 (8%)
Query: 74 ISQAKSMFDSCSTL-DPVACNIMISGYIRND---RLNDAREVFDKTPIKCCVSYTSMIMG 129
+ Q +S +TL DP A +IS + ++ L A +F K + +M+
Sbjct: 27 LKQIQSHLTVTATLKDPYAAAKIISLHAHSNARSSLFYAERLFLCLQNKSTFIWNTMMQA 86
Query: 130 FAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGF 189
F + + A +++ M +PN T + VI + + + + HG V+K + +
Sbjct: 87 FVEKNEAVRAFSLYKHMLESNYLPNNFTFSFVIRACIDVFNLQMGLCFHGQVVKFGWESY 146
Query: 190 VIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPS 249
+ L+++Y C + AR++FD +R++V+W +++G+ +G V +ARELF+R+P
Sbjct: 147 DFVQNGLIHLYANCGFMDLARNMFDMSIKRDVVTWTCLISGYLNSGQVLIARELFDRMPE 206
Query: 250 KDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQI 309
K+ VSWG +I GY+++ EAL ++ M G N IV ++AC A +G I
Sbjct: 207 KNPVSWGALIAGYVRIGFFKEALEVFYDMQVSGFRLNRASIVGALTACAFLGALDQGRWI 266
Query: 310 HSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMI 369
H+ + + + +I YA C G I
Sbjct: 267 HAYVKRHHMSLDRMLGTALIDMYAKC-------------------------------GCI 295
Query: 370 EDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAI 429
E A +F+ M RDVY+++ +ISG A +++ A++LF+ M D GV PNE+T V V A
Sbjct: 296 EMACSVFDEMDDRDVYAFTCLISGLANHDKSEAAIDLFNRMQDEGVVPNEVTFVCVLNAC 355
Query: 430 ASSGTLKEGRWAHEYVLNNSITLNDNLS--AAIIDMYAKCGSINTAFEVFYHIRDRTTSV 487
+ G + EG E ++N + + ++D+ + G I A +V + + S
Sbjct: 356 SRMGMVDEGLRIFE-SMSNRYVIEPQIQHYGCLVDLLGRAGKIEEAKQVVREMPLQPDSY 414
Query: 488 SPWNAIICGLAMHGDANLTLKIYSDLEKR 516
+ A++ +HGD L ++ L +R
Sbjct: 415 T-LGALLDACRVHGDVQLGEEMVDSLVQR 442
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 100/365 (27%), Positives = 168/365 (46%), Gaps = 62/365 (16%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
+R C + G H + K G ES F+QN LI+LYA CG + A++MFD D
Sbjct: 119 IRACIDVFNLQMGLCFHGQVVKFGWESYDFVQNGLIHLYANCGFMDLARNMFDMSIKRDV 178
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
V +ISGY+ + ++ ARE+FD+ P K VS+ ++I G+ + ++EALEVF DM++
Sbjct: 179 VTWTCLISGYLNSGQVLIARELFDRMPEKNPVSWGALIAGYVRIGFFKEALEVFYDMQVS 238
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
G N ++ +++ LG + + R +H V + + ++ T L++MY C + A
Sbjct: 239 GFRLNRASIVGALTACAFLGALDQGRWIHAYVKRHHMSLDRMLGTALIDMYAKCGCIEMA 298
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLS 269
S+FDEM +R++ ++ +++G A E A +LF R+
Sbjct: 299 CSVFDEMDDRDVYAFTCLISGLANHDKSEAAIDLFNRMQD-------------------- 338
Query: 270 EALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATII 329
+G+ PN+V V +++AC R EGL+I
Sbjct: 339 -----------EGVVPNEVTFVCVLNACSRMGMVDEGLRI-------------------- 367
Query: 330 HFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ-KRDVYSWS 388
F + R I+ I + L+ R G IE+A+Q+ M + D Y+
Sbjct: 368 -FESMSNR---------YVIEPQIQHYGCLVDLLGRAGKIEEAKQVVREMPLQPDSYTLG 417
Query: 389 AMISG 393
A++
Sbjct: 418 ALLDA 422
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 110/250 (44%), Gaps = 65/250 (26%)
Query: 16 NLQNSDYEL---ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCG 72
++Q S + L ++V AL C+ A+ QG+ IH+ + + + + + +LI++YAKCG
Sbjct: 234 DMQVSGFRLNRASIVGALTACAFLGALDQGRWIHAYVKRHHMSLDRMLGTALIDMYAKCG 293
Query: 73 LISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQ 132
I A S+FD D R+V+ ++T +I G A
Sbjct: 294 CIEMACSVFDEM----------------------DDRDVY---------AFTCLISGLAN 322
Query: 133 NDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVII 192
+D A+++F M+ GV+PNEVT V+++ +G M+D + I
Sbjct: 323 HDKSEAAIDLFNRMQDEGVVPNEVTFVCVLNACSRMG---------------MVDEGLRI 367
Query: 193 STNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIP-SKD 251
++ N Y + E I + +++ +AG +E A+++ +P D
Sbjct: 368 FESMSNRYVI---------------EPQIQHYGCLVDLLGRAGKIEEAKQVVREMPLQPD 412
Query: 252 VVSWGTMIDG 261
+ G ++D
Sbjct: 413 SYTLGALLDA 422
>gi|449463631|ref|XP_004149535.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 741
Score = 334 bits (857), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 213/671 (31%), Positives = 346/671 (51%), Gaps = 65/671 (9%)
Query: 49 IFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDA 108
+F E N NS+I+ YAK G I+ A+ +FD + V+ N MI+GY+ N+ + DA
Sbjct: 37 VFLQMTERNIVTYNSMISAYAKNGRIANARELFDLMPQRNLVSWNSMIAGYLHNELVEDA 96
Query: 109 REVFDKTPIKCCVSYTSMIM--------------------------------GFAQNDCW 136
+FD+ + S+T MI G+A+ +
Sbjct: 97 ARLFDRMFKRDIYSWTLMITCYTRIGELEKARELFNLLPDKQDTVCRNALIAGYAKKRLF 156
Query: 137 REALEVFRDMRILGVIP-NEVTLASVISSSVHLGGIWECRMLHGLVI--KLMIDGFV--- 190
REA ++F +M + V+ N + + + LG + M V+ LM+DG+V
Sbjct: 157 REAKKLFDEMLVKNVVSWNSILSGYTKNGKMQLGLQFFEAMGERNVVSWNLMVDGYVGVG 216
Query: 191 -----------IISTNLLNMYCVCSS------LVEARSLFDEMKERNIVSWNVMLNGFAK 233
I + N+++ + S + EAR+LF+EM +N+VSWN M+ + +
Sbjct: 217 DLDSAWMFFKKIPTPNVVSWVTMLSGFAHYGRMTEARNLFNEMPTKNLVSWNAMIGAYVR 276
Query: 234 AGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDL 293
++ A +LF +P KD VSW MI+GY++V +L +A + M IA MI
Sbjct: 277 ENQIDDAYKLFMEMPEKDSVSWTAMINGYVRVGKLLQAREILNLMPYKNIAAQTAMINGY 336
Query: 294 ISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHI 353
+ + GR E +I S I C++ ++I YA CGR + A F+ + +
Sbjct: 337 LQS-GR---MDEANEIFSQISVRDSVCWN----SMITGYAHCGRTDEALRLFQEMVCKDM 388
Query: 354 ASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDA 413
SWN +IA + + G ++ A ++FN MQ+R+V SW+++I+GY QN AL F M
Sbjct: 389 VSWNTMIAAYAQAGQMDKALEMFNEMQERNVVSWNSLITGYVQNGLYFEALNCFILMKQQ 448
Query: 414 GVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTA 473
G KP++ T+V A A+ L G H + + + AI+ MYAK G + A
Sbjct: 449 GEKPDQTTIVCCLRASANLAALNVGVQLHHLTIKTGFGNDLFVKNAILTMYAKSGRVPEA 508
Query: 474 FEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCC 533
VF I+++ V WN++I G A++G ++++ + R I + +TF G+LS C
Sbjct: 509 ENVFAEIKNK--DVVSWNSLIAGYALNGCGKEAVELFEVMPLRGIIPDEVTFTGLLSACN 566
Query: 534 HAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIW 593
H G VD G FKSM Y+++P +HY C+++LLGR G+LE+A E+++ M + IW
Sbjct: 567 HGGFVDQGLNLFKSMTETYSIKPQSEHYACVINLLGRVGRLEEAVEIVQGMKTVSSAKIW 626
Query: 594 GTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDC 653
G LL A RIH N+E+ + +A+ L L+P + + VLLSN++A+AGRW+ +R M++
Sbjct: 627 GALLWACRIHHNLELAKYSAERLLALEPQNASNYVLLSNMHAEAGRWDMVERVRVLMKEN 686
Query: 654 GMKRLPGFSGV 664
++ PG S +
Sbjct: 687 KAEKQPGCSWI 697
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 149/553 (26%), Positives = 273/553 (49%), Gaps = 35/553 (6%)
Query: 56 SNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKT 115
S F QN I+ + G I +A ++F + + V N MIS Y +N R+ +ARE+FD
Sbjct: 13 SYVFTQNLRISQLGRSGRIEEAVAVFLQMTERNIVTYNSMISAYAKNGRIANARELFDLM 72
Query: 116 PIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECR 175
P + VS+ SMI G+ N+ +A +F M + + +I+ +G + + R
Sbjct: 73 PQRNLVSWNSMIAGYLHNELVEDAARLFDRMFKRDI----YSWTLMITCYTRIGELEKAR 128
Query: 176 MLHGLVIKLMIDGFVIISTN-LLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKA 234
L L+ D + N L+ Y EA+ LFDEM +N+VSWN +L+G+ K
Sbjct: 129 EL----FNLLPDKQDTVCRNALIAGYAKKRLFREAKKLFDEMLVKNVVSWNSILSGYTKN 184
Query: 235 GLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLI 294
G ++L + FE + ++VVSW M+DGY+ V L A ++ + PN V V ++
Sbjct: 185 GKMQLGLQFFEAMGERNVVSWNLMVDGYVGVGDLDSAWMFFKKI----PTPNVVSWVTML 240
Query: 295 SACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLA-RLQFELGIKDHI 353
S E + + + ++ +I Y +I+ A +L E+ KD +
Sbjct: 241 SGFAHYGRMTEARNLFNEMPTKNLVSWN----AMIGAYVRENQIDDAYKLFMEMPEKDSV 296
Query: 354 ASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDA 413
SW A+I G++R G + AR++ N M +++ + +AMI+GY Q+ + + A E+F +
Sbjct: 297 -SWTAMINGYVRVGKLLQAREILNLMPYKNIAAQTAMINGYLQSGRMDEANEIFSQI--- 352
Query: 414 GVKPNEITMVSVFCAIASSGTLKEG-RWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINT 472
V+ + + S+ A G E R E V + ++ N ++A YA+ G ++
Sbjct: 353 SVR-DSVCWNSMITGYAHCGRTDEALRLFQEMVCKDMVSWNTMIAA-----YAQAGQMDK 406
Query: 473 AFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTC 532
A E+F +++R +V WN++I G +G L + ++++ K + T + L
Sbjct: 407 ALEMFNEMQER--NVVSWNSLITGYVQNGLYFEALNCFILMKQQGEKPDQTTIVCCLRAS 464
Query: 533 CHAGLVDLG-ERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVV 591
+ +++G + + ++K+ + DL ++ + ++G++ +AE V + K DVV
Sbjct: 465 ANLAALNVGVQLHHLTIKTGFG--NDLFVKNAILTMYAKSGRVPEAENVFAEIKNK-DVV 521
Query: 592 IWGTLLAASRIHG 604
W +L+A ++G
Sbjct: 522 SWNSLIAGYALNG 534
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 136/510 (26%), Positives = 240/510 (47%), Gaps = 54/510 (10%)
Query: 48 LIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLND 107
+ FK N ++++ +A G +++A+++F+ T + V+ N MI Y+R ++++D
Sbjct: 223 MFFKKIPTPNVVSWVTMLSGFAHYGRMTEARNLFNEMPTKNLVSWNAMIGAYVRENQIDD 282
Query: 108 AREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIP--NEVTLASVISSS 165
A ++F + P K VS+T+MI G+ + +A E IL ++P N ++I+
Sbjct: 283 AYKLFMEMPEKDSVSWTAMINGYVRVGKLLQARE------ILNLMPYKNIAAQTAMINGY 336
Query: 166 VHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWN 225
+ G + E + ++ + V ++ ++ Y C EA LF EM +++VSWN
Sbjct: 337 LQSGRMDEANEIFS---QISVRDSVCWNS-MITGYAHCGRTDEALRLFQEMVCKDMVSWN 392
Query: 226 VMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAP 285
M+ +A+AG ++ A E+F + ++VVSW ++I GY+Q EAL + M G P
Sbjct: 393 TMIAAYAQAGQMDKALEMFNEMQERNVVSWNSLITGYVQNGLYFEALNCFILMKQQGEKP 452
Query: 286 NDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQF 345
+ IV + A A G+Q+H + +K GF F++ I+ YA GR+ A F
Sbjct: 453 DQTTIVCCLRASANLAALNVGVQLHHLTIKTGFGNDLFVKNAILTMYAKSGRVPEAENVF 512
Query: 346 -ELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMAL 404
E+ KD + SWN+LIAG+ NG ++A +LF M R
Sbjct: 513 AEIKNKD-VVSWNSLIAGYALNGCGKEAVELFEVMPLR---------------------- 549
Query: 405 ELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNN-SITLNDNLSAAIIDM 463
G+ P+E+T + A G + +G + + SI A +I++
Sbjct: 550 ---------GIIPDEVTFTGLLSACNHGGFVDQGLNLFKSMTETYSIKPQSEHYACVINL 600
Query: 464 YAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKL--- 520
+ G + A E+ ++ +S W A++ +H NL L YS +R + L
Sbjct: 601 LGRVGRLEEAVEIVQGMKT-VSSAKIWGALLWACRIH--HNLELAKYS--AERLLALEPQ 655
Query: 521 NSITFIGVLSTCCHAGLVDLGERYFKSMKS 550
N+ ++ + + AG D+ ER MK
Sbjct: 656 NASNYVLLSNMHAEAGRWDMVERVRVLMKE 685
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 95/356 (26%), Positives = 168/356 (47%), Gaps = 32/356 (8%)
Query: 294 ISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHI 353
IS GR+ E + + + + Y+ ++I YA GRI AR F+L + ++
Sbjct: 22 ISQLGRSGRIEEAVAVFLQMTERNIVTYN----SMISAYAKNGRIANARELFDLMPQRNL 77
Query: 354 ASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDA 413
SWN++IAG++ N ++EDA +LF+ M KRD+YSW+ MI+ Y + + A ELF+ + D
Sbjct: 78 VSWNSMIAGYLHNELVEDAARLFDRMFKRDIYSWTLMITCYTRIGELEKARELFNLLPD- 136
Query: 414 GVKPNEITMVSVFCAIASSGTLKEG-RWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINT 472
K + + ++ A +E + E ++ N ++ N LS Y K G +
Sbjct: 137 --KQDTVCRNALIAGYAKKRLFREAKKLFDEMLVKNVVSWNSILSG-----YTKNGKMQL 189
Query: 473 AFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTC 532
+ F + +R +V WN ++ G GD + + + N+ ++++ +LS
Sbjct: 190 GLQFFEAMGER--NVVSWNLMVDGYVGVGDLDSAWMFFKKIPTPNV----VSWVTMLSGF 243
Query: 533 CHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVI 592
H G + F M + +L + M+ R Q++DA ++ MP K D V
Sbjct: 244 AHYGRMTEARNLFNEMPT-----KNLVSWNAMIGAYVRENQIDDAYKLFMEMPEK-DSVS 297
Query: 593 WGTLLAASRIHGNVEVGE-RAAKSLAGLQPSHG-PSRVLLSNIYADAGRWEDAFSI 646
W + I+G V VG+ A+ + L P ++ + N Y +GR ++A I
Sbjct: 298 WTAM-----INGYVRVGKLLQAREILNLMPYKNIAAQTAMINGYLQSGRMDEANEI 348
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 73/147 (49%), Gaps = 31/147 (21%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
+ +V LR + A++ G Q+H L K+G ++ F++N+++ +YAK G + +A+++F
Sbjct: 454 QTTIVCCLRASANLAALNVGVQLHHLTIKTGFGNDLFVKNAILTMYAKSGRVPEAENVFA 513
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
D V+ N +I+GY A N C +EA+E+
Sbjct: 514 EIKNKDVVSWNSLIAGY-------------------------------ALNGCGKEAVEL 542
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLG 169
F M + G+IP+EVT ++S+ H G
Sbjct: 543 FEVMPLRGIIPDEVTFTGLLSACNHGG 569
>gi|449451649|ref|XP_004143574.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
mitochondrial-like [Cucumis sativus]
gi|449516723|ref|XP_004165396.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
mitochondrial-like [Cucumis sativus]
Length = 651
Score = 334 bits (857), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 202/660 (30%), Positives = 326/660 (49%), Gaps = 100/660 (15%)
Query: 8 SVFNSQKAN-LQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLIN 66
++F+ K N LQ +++ +S + C+ ++ Q IH+ + KS S+ ++Q ++++
Sbjct: 38 ALFHQLKLNGLQPNNFTFPFLS--KACAKLSHLTNSQIIHTHVVKSPFYSDIYVQTAMVD 95
Query: 67 LYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSM 126
+Y KCG +++DA +FDK P++ S+ +M
Sbjct: 96 MYVKCG-------------------------------KVDDAYNLFDKMPVRNIASWNAM 124
Query: 127 IMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMI 186
I+GF+Q +F MR++G P+ T+ + + + + + +H + I+ +
Sbjct: 125 IIGFSQIGSLDRVFNLFMGMRLVGTRPDAATVIGLTRAVISAKSLRFLKAVHAIGIETGL 184
Query: 187 DGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFER 246
D +S N + ++K G ++LA+ +F
Sbjct: 185 DADTSVS-------------------------------NTWIAAYSKCGELQLAKMVFHG 213
Query: 247 I--PSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFG 304
I ++ VSW ++I Y + +A+ Y+ +LCDG P+ I+ L+S+C + A
Sbjct: 214 IQKTARSSVSWNSLIACYAHFGKYVDAVKSYKGLLCDGFKPDASTIISLLSSCQQPEALI 273
Query: 305 EGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFI 364
G IH F+LG I+ N LI+ +
Sbjct: 274 YGFLIHG-------------------------------HGFQLGCDSDISLINTLISMYS 302
Query: 365 RNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVS 424
R G I A LF+ M R SW+AMISGY++ + + AL LF+ M + G KP+ +T++S
Sbjct: 303 RCGDISSATILFDGMSIRTCVSWTAMISGYSEVGRVDDALVLFNAMEETGEKPDIVTVLS 362
Query: 425 VFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRT 484
+ +G L G W Y + + + + A+IDMYAKCGS+N A E+FY + +RT
Sbjct: 363 LISGCGKTGALGLGHWIDNYASLHELKKDVVVCNALIDMYAKCGSLNDAREIFYSLPNRT 422
Query: 485 TSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERY 544
V W A+I A++G+ L ++S L + I+ N+ITF+ VL CCH G ++ G
Sbjct: 423 --VVSWTAMIAACALNGEFREALDLFSLLSESGIEPNNITFLAVLQACCHGGYLEKGREC 480
Query: 545 FKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHG 604
F M Y + P L HY CM+DLLGR G+L +A EVI+ MPMK D IWG LL A +IH
Sbjct: 481 FMMMTERYGINPGLDHYSCMIDLLGRKGKLIEALEVIQDMPMKPDEGIWGALLGACKIHN 540
Query: 605 NVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
N+E+GE ++ L LQP S V ++NIYA GRW++ ++RK MR M++ PG S V
Sbjct: 541 NMEIGEYVSRYLFELQPRVAVSFVEMANIYASVGRWDEVAAMRKTMRSNQMRKSPGKSVV 600
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 111/482 (23%), Positives = 212/482 (43%), Gaps = 64/482 (13%)
Query: 123 YTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVI 182
+ S I G +AL +F +++ G+ PN T + + L + +++H V+
Sbjct: 20 WNSSIRGAVNQGNASKALALFHQLKLNGLQPNNFTFPFLSKACAKLSHLTNSQIIHTHVV 79
Query: 183 KLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARE 242
K + + T +++MY C + +A +LFD+M RNI SWN M+ GF+
Sbjct: 80 KSPFYSDIYVQTAMVDMYVKCGKVDDAYNLFDKMPVRNIASWNAMIIGFS---------- 129
Query: 243 LFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMA 302
Q+ L ++ M G P+ ++ L A A +
Sbjct: 130 ---------------------QIGSLDRVFNLFMGMRLVGTRPDAATVIGLTRAVISAKS 168
Query: 303 FGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAG 362
+H+I ++ G D + T I Y+ CG + LA++ F
Sbjct: 169 LRFLKAVHAIGIETGLDADTSVSNTWIAAYSKCGELQLAKMVF----------------- 211
Query: 363 FIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITM 422
+G+ + AR SW+++I+ YA + A++ + G++ G KP+ T+
Sbjct: 212 ---HGIQKTARS---------SVSWNSLIACYAHFGKYVDAVKSYKGLLCDGFKPDASTI 259
Query: 423 VSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRD 482
+S+ + L G H + + +L +I MY++CG I++A +F +
Sbjct: 260 ISLLSSCQQPEALIYGFLIHGHGFQLGCDSDISLINTLISMYSRCGDISSATILFDGMSI 319
Query: 483 RTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGE 542
RT W A+I G + G + L +++ +E+ K + +T + ++S C G + LG
Sbjct: 320 RT--CVSWTAMISGYSEVGRVDDALVLFNAMEETGEKPDIVTVLSLISGCGKTGALGLGH 377
Query: 543 RYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRI 602
+ + S++ ++ D+ ++D+ + G L DA E+ S+P + VV W ++AA +
Sbjct: 378 -WIDNYASLHELKKDVVVCNALIDMYAKCGSLNDAREIFYSLPNRT-VVSWTAMIAACAL 435
Query: 603 HG 604
+G
Sbjct: 436 NG 437
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 110/252 (43%), Gaps = 12/252 (4%)
Query: 387 WSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVL 446
W++ I G + AL LFH + G++PN T + A A L + H +V+
Sbjct: 20 WNSSIRGAVNQGNASKALALFHQLKLNGLQPNNFTFPFLSKACAKLSHLTNSQIIHTHVV 79
Query: 447 NNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLT 506
+ + + A++DMY KCG ++ A+ +F + R +++ WNA+I G + G +
Sbjct: 80 KSPFYSDIYVQTAMVDMYVKCGKVDDAYNLFDKMPVR--NIASWNAMIIGFSQIGSLDRV 137
Query: 507 LKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSV---YNVEPDLKHYGC 563
++ + + ++ T IG+ A + R+ K++ ++ ++ D
Sbjct: 138 FNLFMGMRLVGTRPDAATVIGLTRAVISAKSL----RFLKAVHAIGIETGLDADTSVSNT 193
Query: 564 MVDLLGRAGQLEDAEEVIRSMPMKA-DVVIWGTLLAASRIHGNVEVGERAAKSLA--GLQ 620
+ + G+L+ A+ V + A V W +L+A G ++ K L G +
Sbjct: 194 WIAAYSKCGELQLAKMVFHGIQKTARSSVSWNSLIACYAHFGKYVDAVKSYKGLLCDGFK 253
Query: 621 PSHGPSRVLLSN 632
P LLS+
Sbjct: 254 PDASTIISLLSS 265
>gi|297598748|ref|NP_001046155.2| Os02g0191200 [Oryza sativa Japonica Group]
gi|46390971|dbj|BAD16484.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50726401|dbj|BAD34012.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|255670678|dbj|BAF08069.2| Os02g0191200 [Oryza sativa Japonica Group]
Length = 744
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 186/567 (32%), Positives = 320/567 (56%), Gaps = 9/567 (1%)
Query: 105 LNDAREVFDKTPIKCCVSYTSM-IMGFAQNDCWREALEVFRDMRILGVIPNEVT---LAS 160
L A +FD+ P + T++ A +D R L +FR MR GV P+ T L
Sbjct: 53 LRYALHLFDRMPPSTFLFDTALRACSRAGSDPHRPFL-LFRRMRRAGVRPDGFTFHFLFK 111
Query: 161 VISSSVHLGGIWECRMLHGLVIKLMIDGFV-IISTNLLNMYCVCSSLVEARSLFDEMKER 219
SSS + C MLH ++ M+ +S +L++MY +AR FDE+ +
Sbjct: 112 CSSSSSRPHSLLLCTMLHAACLRTMLPSAAPFVSNSLIHMYIRLGLAADARRAFDEIHVK 171
Query: 220 NIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAML 279
+ V+W ++++G AK G++ + L + P +DV+SW ++I Y + R EA+ ++ ML
Sbjct: 172 DAVAWTMLISGLAKMGMLCDTQLLLSQAPVRDVISWTSLIAAYSRANRAREAVGCFKTML 231
Query: 280 CDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRIN 339
GIAP++V ++ ++SAC + G +H ++ + G + + +I YA CG
Sbjct: 232 SHGIAPDEVTVIAVLSACAKLKDLELGRSLHLLVEEKGMPTSENLVVALIDMYAKCGDFG 291
Query: 340 LARLQFE-LGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNE 398
A+ F+ LG SWNA+I G+ ++G ++ AR LF+ M+ RD+ ++++M++GY +
Sbjct: 292 HAQQVFDALGRGPRPQSWNAIIDGYCKHGHVDVARSLFDEMEVRDIITFNSMMTGYIHSG 351
Query: 399 QPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSA 458
Q AL LF M ++ + T+V++ A AS G L++GR H + + + L
Sbjct: 352 QLREALLLFMSMRRHDLRVDNFTVVNLLTACASLGALQQGRALHACIEQRLVEADIYLGT 411
Query: 459 AIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNI 518
A++DMY KCG ++ A VF + R V W A+I GLA +G L+ + +
Sbjct: 412 ALLDMYMKCGRVDEATIVFQRMGKR--DVHTWTAMIAGLAFNGMGKAALEHFYQMRCDGF 469
Query: 519 KLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAE 578
+ NS+++I VL+ C H+ L++ G YF M+ +YN+ P ++HYGCM+DLLGR+G L++A
Sbjct: 470 QPNSVSYIAVLTACSHSCLLNEGRLYFDEMRILYNIHPQIEHYGCMIDLLGRSGLLDEAM 529
Query: 579 EVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAG 638
+++++MP++ + VIW ++L+A R+H ++++ + AA+ L L+P V L NIY D+
Sbjct: 530 DLVKTMPIQPNAVIWASILSACRVHKHIDLAQCAAEHLLKLEPDEDGVYVQLYNIYIDSR 589
Query: 639 RWEDAFSIRKEMRDCGMKRLPGFSGVV 665
+WE+A IR M + +K+ G+S +
Sbjct: 590 QWENASKIRMLMEERQVKKTAGYSSIT 616
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 129/493 (26%), Positives = 243/493 (49%), Gaps = 50/493 (10%)
Query: 45 IHSLIFKSGLESNT-FIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRND 103
+H+ ++ L S F+ NSLI++Y + GL + A+ FD D VA ++ISG +
Sbjct: 128 LHAACLRTMLPSAAPFVSNSLIHMYIRLGLAADARRAFDEIHVKDAVAWTMLISGLAKMG 187
Query: 104 RLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVIS 163
L D + + + P++ +S+TS+I +++ + REA+ F+ M G+ P+EVT+ +V+S
Sbjct: 188 MLCDTQLLLSQAPVRDVISWTSLIAAYSRANRAREAVGCFKTMLSHGIAPDEVTVIAVLS 247
Query: 164 SSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEM-KERNIV 222
+ L + R LH LV + + + L++MY C A+ +FD + +
Sbjct: 248 ACAKLKDLELGRSLHLLVEEKGMPTSENLVVALIDMYAKCGDFGHAQQVFDALGRGPRPQ 307
Query: 223 SWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDG 282
SWN +++G+ K G V++AR LF+ + +D++++ +M+ GY+ +L EAL ++ +M
Sbjct: 308 SWNAIIDGYCKHGHVDVARSLFDEMEVRDIITFNSMMTGYIHSGQLREALLLFMSMRRHD 367
Query: 283 IAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLAR 342
+ ++ +V+L++AC A +G +H+ I + + ++ ++ Y CGR++ A
Sbjct: 368 LRVDNFTVVNLLTACASLGALQQGRALHACIEQRLVEADIYLGTALLDMYMKCGRVDEAT 427
Query: 343 LQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNM 402
+ F+ K + +W A+IAG NGM G A
Sbjct: 428 IVFQRMGKRDVHTWTAMIAGLAFNGM------------------------GKA------- 456
Query: 403 ALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGR-WAHEYVLNNSITLNDNLSAAII 461
ALE F+ M G +PN ++ ++V A + S L EGR + E + +I +I
Sbjct: 457 ALEHFYQMRCDGFQPNSVSYIAVLTACSHSCLLNEGRLYFDEMRILYNIHPQIEHYGCMI 516
Query: 462 DMYAKCGSINTAFEVFYHIRDRTTSVSP----WNAIICGLAMHGDANLT-------LKIY 510
D+ + G ++ A ++ +T + P W +I+ +H +L LK+
Sbjct: 517 DLLGRSGLLDEAMDLV-----KTMPIQPNAVIWASILSACRVHKHIDLAQCAAEHLLKLE 571
Query: 511 SDLEKRNIKLNSI 523
D + ++L +I
Sbjct: 572 PDEDGVYVQLYNI 584
Score = 125 bits (314), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 84/383 (21%), Positives = 174/383 (45%), Gaps = 63/383 (16%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E+ +++ L C+ + G+ +H L+ + G+ ++ + +LI++YAKCG A+ +FD
Sbjct: 239 EVTVIAVLSACAKLKDLELGRSLHLLVEEKGMPTSENLVVALIDMYAKCGDFGHAQQVFD 298
Query: 83 SCST-LDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALE 141
+ P + N +I GY ++ ++ AR +FD+ ++ +++ SM+ G+ + REAL
Sbjct: 299 ALGRGPRPQSWNAIIDGYCKHGHVDVARSLFDEMEVRDIITFNSMMTGYIHSGQLREALL 358
Query: 142 VFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYC 201
+F MR + + T+ +++++ LG + + R LH + + +++ + + T LL+MY
Sbjct: 359 LFMSMRRHDLRVDNFTVVNLLTACASLGALQQGRALHACIEQRLVEADIYLGTALLDMYM 418
Query: 202 VCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDG 261
C + EA +F M +R++ +W M+ G A G+ + A E F +
Sbjct: 419 KCGRVDEATIVFQRMGKRDVHTWTAMIAGLAFNGMGKAALEHFYQ--------------- 463
Query: 262 YLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCY 321
M CDG PN V + +++AC + E
Sbjct: 464 ----------------MRCDGFQPNSVSYIAVLTACSHSCLLNE---------------- 491
Query: 322 DFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ- 380
GR+ ++ I I + +I R+G++++A L M
Sbjct: 492 --------------GRLYFDEMRILYNIHPQIEHYGCMIDLLGRSGLLDEAMDLVKTMPI 537
Query: 381 KRDVYSWSAMISGYAQNEQPNMA 403
+ + W++++S ++ ++A
Sbjct: 538 QPNAVIWASILSACRVHKHIDLA 560
>gi|449440989|ref|XP_004138266.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449524140|ref|XP_004169081.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 695
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 189/578 (32%), Positives = 297/578 (51%), Gaps = 66/578 (11%)
Query: 87 LDPVACNIMI--SGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFR 144
LDP+ ++ + + D ++ A +F+ +Y MI G A AL +F+
Sbjct: 51 LDPIITEAVLESAALLLPDTIDYALSIFNHIDKPESSAYNVMIRGLAFKRSPDNALLLFK 110
Query: 145 DMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCS 204
M V ++ T +SV+ + + + E +H L++K + L+ MY C
Sbjct: 111 KMHEKSVQHDKFTFSSVLKACSRMKALREGEQVHALILKSGFKSNEFVENTLIQMYANC- 169
Query: 205 SLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQ 264
G + +AR +F+ +P + +V+W +M+ GY +
Sbjct: 170 ------------------------------GQIGVARHVFDGMPERSIVAWNSMLSGYTK 199
Query: 265 VERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFI 324
E + ++R +L I +DV ++ ++ ACGR G I IV G + +
Sbjct: 200 NGLWDEVVKLFRKILELRIEFDDVTMISVLMACGRLANLEIGELIGEYIVSKGLRRNNTL 259
Query: 325 QATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDV 384
++I YA CG+++ A R+LF+ M KRDV
Sbjct: 260 TTSLIDMYAKCGQVDTA-------------------------------RKLFDEMDKRDV 288
Query: 385 YSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEY 444
+WSAMISGYAQ ++ AL LFH M V PNE+TMVSV + A G + G+W H Y
Sbjct: 289 VAWSAMISGYAQADRCKEALNLFHEMQKGNVYPNEVTMVSVLYSCAMLGAYETGKWVHFY 348
Query: 445 VLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDAN 504
+ + L L +ID YAKCG I+ + EVF + + +V W A+I GLA +G+
Sbjct: 349 IKKKKMKLTVTLGTQLIDFYAKCGYIDRSVEVFKEMSFK--NVFTWTALIQGLANNGEGK 406
Query: 505 LTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCM 564
+ L+ +S + + ++K N +TFIGVLS C HA LVD G F SM+ +++EP ++HYGCM
Sbjct: 407 MALEFFSSMLENDVKPNDVTFIGVLSACSHACLVDQGRHLFNSMRRDFDIEPRIEHYGCM 466
Query: 565 VDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHG 624
VD+LGRAG LE+A + I +MP + V+W TLLA+ R H N+E+ E++ + + L+P+H
Sbjct: 467 VDILGRAGFLEEAYQFIDNMPFPPNAVVWRTLLASCRAHKNIEMAEKSLEHITRLEPAHS 526
Query: 625 PSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
+LLSN YA GR EDA +R +++ +K++PG S
Sbjct: 527 GDYILLSNTYALVGRVEDAIRVRSLIKEKEIKKIPGCS 564
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 122/493 (24%), Positives = 214/493 (43%), Gaps = 107/493 (21%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
+ S L+ CS A+ +G+Q+H+LI KSG +SN F++N+LI +YA CG I A+ +FD
Sbjct: 121 KFTFSSVLKACSRMKALREGEQVHALILKSGFKSNEFVENTLIQMYANCGQIGVARHVFD 180
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
VA N M+SGY +N W E +++
Sbjct: 181 GMPERSIVAWNSMLSGY-------------------------------TKNGLWDEVVKL 209
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
FR + L + ++VT+ SV+ + L + ++ ++ + ++T+L++MY
Sbjct: 210 FRKILELRIEFDDVTMISVLMACGRLANLEIGELIGEYIVSKGLRRNNTLTTSLIDMYAK 269
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
C + AR LFDEM +R++V+W+ M++G+A
Sbjct: 270 CGQVDTARKLFDEMDKRDVVAWSAMISGYA------------------------------ 299
Query: 263 LQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD 322
Q +R EAL ++ M + PN+V +V ++ +C A+ G +H I K
Sbjct: 300 -QADRCKEALNLFHEMQKGNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLTV 358
Query: 323 FIQATIIHFYAACGRINLARLQF-ELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQK 381
+ +I FYA CG I+ + F E+ K+ + +W ALI G NG
Sbjct: 359 TLGTQLIDFYAKCGYIDRSVEVFKEMSFKN-VFTWTALIQGLANNG-------------- 403
Query: 382 RDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWA 441
+ MALE F M++ VKPN++T + V A + + + +GR
Sbjct: 404 -----------------EGKMALEFFSSMLENDVKPNDVTFIGVLSACSHACLVDQGRH- 445
Query: 442 HEYVLNNSITLNDNLSAAI------IDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIIC 495
L NS+ + ++ I +D+ + G + A++ ++ +V W ++
Sbjct: 446 ----LFNSMRRDFDIEPRIEHYGCMVDILGRAGFLEEAYQFIDNMPFPPNAVV-WRTLLA 500
Query: 496 GLAMHGDANLTLK 508
H + + K
Sbjct: 501 SCRAHKNIEMAEK 513
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 102/263 (38%), Gaps = 77/263 (29%)
Query: 3 LDHFHSVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQN 62
L+ FH + QK N+ + E+ +VS L C+ A G+ +H I K ++ +
Sbjct: 308 LNLFHEM---QKGNVYPN--EVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLTVTLGT 362
Query: 63 SLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVS 122
LI+ YAKCG I ++ EVF + K +
Sbjct: 363 QLIDFYAKCGYIDRSV-------------------------------EVFKEMSFKNVFT 391
Query: 123 YTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVI 182
+T++I G A N + ALE F M V PN+VT V+S+ H
Sbjct: 392 WTALIQGLANNGEGKMALEFFSSMLENDVKPNDVTFIGVLSACSH--------------- 436
Query: 183 KLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMK-----ERNIVSWNVMLNGFAKAGLV 237
++D + R LF+ M+ E I + M++ +AG +
Sbjct: 437 ACLVD--------------------QGRHLFNSMRRDFDIEPRIEHYGCMVDILGRAGFL 476
Query: 238 ELARELFERIP-SKDVVSWGTMI 259
E A + + +P + V W T++
Sbjct: 477 EEAYQFIDNMPFPPNAVVWRTLL 499
>gi|242062548|ref|XP_002452563.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
gi|241932394|gb|EES05539.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
Length = 745
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 195/645 (30%), Positives = 339/645 (52%), Gaps = 48/645 (7%)
Query: 25 ALVSALRYCSAHIAVSQGQQIHSLIFKS-GLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
AL+SA H+A + +H +I ++ T++ N L+ Y K G ++A+ +FD+
Sbjct: 11 ALLSAAARTEPHVAGA----LHCVILRTLPHPPPTYLLNHLLTAYGKAGRHARARRVFDA 66
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
+ N ++S L+D +F + VSY ++I GF+ +A+ V+
Sbjct: 67 MPHPNLFTYNALLSTLAHARLLSDMEALFASMTQRDIVSYNAVIAGFSGGGSHAQAVRVY 126
Query: 144 RDMRIL----GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNM 199
+ +L V P+ +T+++++ ++ LG + H +++L + + L++M
Sbjct: 127 --LALLQADSSVRPSRITMSTMVMAASALGDRALGKQFHCQILRLGFGANAFVGSPLVDM 184
Query: 200 YCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMI 259
Y S + +A+ FDE+ +N+V +N M+ G + +VE AR LFE + +D ++W TM+
Sbjct: 185 YAKMSLVGDAKRAFDEVDSKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDSITWTTMV 244
Query: 260 DGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFD 319
G+ Q SEAL ++R M GIA + +++ACG A +G QIH+ I++ +D
Sbjct: 245 TGFTQNGLESEALEIFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTRYD 304
Query: 320 CYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNM 379
F+ + ++ Y+ C I LA +F M
Sbjct: 305 DNVFVGSALVDMYSKCRSIKLAE-------------------------------TVFRRM 333
Query: 380 QKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGR 439
+++ SW+A+I GY QN A+ +F M G+ P++ T+ SV + A+ +L+EG
Sbjct: 334 TCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDYTLGSVISSCANLASLEEGA 393
Query: 440 WAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHI--RDRTTSVSPWNAIICGL 497
H L + + +S A++ +Y KCGSI A +F + D+ + W A++ G
Sbjct: 394 QFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVS----WTALVSGY 449
Query: 498 AMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPD 557
A G A T+ ++ + + +K + +TFIGVLS C AG V+ G YF SM+ + + P
Sbjct: 450 AQFGRAKETIDLFEKMLAKGVKPDGVTFIGVLSACSRAGFVEKGRSYFHSMQKDHGIVPI 509
Query: 558 LKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLA 617
HY CM+DL R+G+L++AEE I+ MPM D + WGTLL+A R+ G++E+G+ AA++L
Sbjct: 510 DDHYTCMIDLYSRSGKLKEAEEFIKQMPMHPDAIGWGTLLSACRLRGDMEIGKWAAENLL 569
Query: 618 GLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
+ P + S VLL +++A G+W + +R+ MRD +K+ PG S
Sbjct: 570 EIDPQNPASYVLLCSMHAAKGQWNEVAQLRRGMRDRQVKKEPGCS 614
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 99/254 (38%), Gaps = 76/254 (29%)
Query: 13 QKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCG 72
Q+ + DY L S + C+ ++ +G Q H L SGL + N+L+ LY KCG
Sbjct: 365 QRDGIDPDDYTLG--SVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCG 422
Query: 73 LISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQ 132
I A +FD S D V+ ++SGY + R
Sbjct: 423 SIEDAHRLFDEMSFHDQVSWTALVSGYAQFGRA--------------------------- 455
Query: 133 NDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVII 192
+E +++F M GV P+ VT V+S+
Sbjct: 456 ----KETIDLFEKMLAKGVKPDGVTFIGVLSA---------------------------- 483
Query: 193 STNLLNMYCVCSSLVE-ARSLFDEM-KERNIVS----WNVMLNGFAKAGLVELARELFER 246
C + VE RS F M K+ IV + M++ ++++G ++ A E ++
Sbjct: 484 --------CSRAGFVEKGRSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGKLKEAEEFIKQ 535
Query: 247 IP-SKDVVSWGTMI 259
+P D + WGT++
Sbjct: 536 MPMHPDAIGWGTLL 549
>gi|222622350|gb|EEE56482.1| hypothetical protein OsJ_05706 [Oryza sativa Japonica Group]
Length = 799
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 186/567 (32%), Positives = 320/567 (56%), Gaps = 9/567 (1%)
Query: 105 LNDAREVFDKTPIKCCVSYTSM-IMGFAQNDCWREALEVFRDMRILGVIPNEVT---LAS 160
L A +FD+ P + T++ A +D R L +FR MR GV P+ T L
Sbjct: 53 LRYALHLFDRMPPSTFLFDTALRACSRAGSDPHRPFL-LFRRMRRAGVRPDGFTFHFLFK 111
Query: 161 VISSSVHLGGIWECRMLHGLVIKLMIDGFV-IISTNLLNMYCVCSSLVEARSLFDEMKER 219
SSS + C MLH ++ M+ +S +L++MY +AR FDE+ +
Sbjct: 112 CSSSSSRPHSLLLCTMLHAACLRTMLPSAAPFVSNSLIHMYIRLGLAADARRAFDEIHVK 171
Query: 220 NIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAML 279
+ V+W ++++G AK G++ + L + P +DV+SW ++I Y + R EA+ ++ ML
Sbjct: 172 DAVAWTMLISGLAKMGMLCDTQLLLSQAPVRDVISWTSLIAAYSRANRAREAVGCFKTML 231
Query: 280 CDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRIN 339
GIAP++V ++ ++SAC + G +H ++ + G + + +I YA CG
Sbjct: 232 SHGIAPDEVTVIAVLSACAKLKDLELGRSLHLLVEEKGMPTSENLVVALIDMYAKCGDFG 291
Query: 340 LARLQFE-LGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNE 398
A+ F+ LG SWNA+I G+ ++G ++ AR LF+ M+ RD+ ++++M++GY +
Sbjct: 292 HAQQVFDALGRGPRPQSWNAIIDGYCKHGHVDVARSLFDEMEVRDIITFNSMMTGYIHSG 351
Query: 399 QPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSA 458
Q AL LF M ++ + T+V++ A AS G L++GR H + + + L
Sbjct: 352 QLREALLLFMSMRRHDLRVDNFTVVNLLTACASLGALQQGRALHACIEQRLVEADIYLGT 411
Query: 459 AIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNI 518
A++DMY KCG ++ A VF + R V W A+I GLA +G L+ + +
Sbjct: 412 ALLDMYMKCGRVDEATIVFQRMGKR--DVHTWTAMIAGLAFNGMGKAALEHFYQMRCDGF 469
Query: 519 KLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAE 578
+ NS+++I VL+ C H+ L++ G YF M+ +YN+ P ++HYGCM+DLLGR+G L++A
Sbjct: 470 QPNSVSYIAVLTACSHSCLLNEGRLYFDEMRILYNIHPQIEHYGCMIDLLGRSGLLDEAM 529
Query: 579 EVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAG 638
+++++MP++ + VIW ++L+A R+H ++++ + AA+ L L+P V L NIY D+
Sbjct: 530 DLVKTMPIQPNAVIWASILSACRVHKHIDLAQCAAEHLLKLEPDEDGVYVQLYNIYIDSR 589
Query: 639 RWEDAFSIRKEMRDCGMKRLPGFSGVV 665
+WE+A IR M + +K+ G+S +
Sbjct: 590 QWENASKIRMLMEERQVKKTAGYSSIT 616
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 129/493 (26%), Positives = 243/493 (49%), Gaps = 50/493 (10%)
Query: 45 IHSLIFKSGLESNT-FIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRND 103
+H+ ++ L S F+ NSLI++Y + GL + A+ FD D VA ++ISG +
Sbjct: 128 LHAACLRTMLPSAAPFVSNSLIHMYIRLGLAADARRAFDEIHVKDAVAWTMLISGLAKMG 187
Query: 104 RLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVIS 163
L D + + + P++ +S+TS+I +++ + REA+ F+ M G+ P+EVT+ +V+S
Sbjct: 188 MLCDTQLLLSQAPVRDVISWTSLIAAYSRANRAREAVGCFKTMLSHGIAPDEVTVIAVLS 247
Query: 164 SSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEM-KERNIV 222
+ L + R LH LV + + + L++MY C A+ +FD + +
Sbjct: 248 ACAKLKDLELGRSLHLLVEEKGMPTSENLVVALIDMYAKCGDFGHAQQVFDALGRGPRPQ 307
Query: 223 SWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDG 282
SWN +++G+ K G V++AR LF+ + +D++++ +M+ GY+ +L EAL ++ +M
Sbjct: 308 SWNAIIDGYCKHGHVDVARSLFDEMEVRDIITFNSMMTGYIHSGQLREALLLFMSMRRHD 367
Query: 283 IAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLAR 342
+ ++ +V+L++AC A +G +H+ I + + ++ ++ Y CGR++ A
Sbjct: 368 LRVDNFTVVNLLTACASLGALQQGRALHACIEQRLVEADIYLGTALLDMYMKCGRVDEAT 427
Query: 343 LQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNM 402
+ F+ K + +W A+IAG NGM G A
Sbjct: 428 IVFQRMGKRDVHTWTAMIAGLAFNGM------------------------GKA------- 456
Query: 403 ALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGR-WAHEYVLNNSITLNDNLSAAII 461
ALE F+ M G +PN ++ ++V A + S L EGR + E + +I +I
Sbjct: 457 ALEHFYQMRCDGFQPNSVSYIAVLTACSHSCLLNEGRLYFDEMRILYNIHPQIEHYGCMI 516
Query: 462 DMYAKCGSINTAFEVFYHIRDRTTSVSP----WNAIICGLAMHGDANLT-------LKIY 510
D+ + G ++ A ++ +T + P W +I+ +H +L LK+
Sbjct: 517 DLLGRSGLLDEAMDLV-----KTMPIQPNAVIWASILSACRVHKHIDLAQCAAEHLLKLE 571
Query: 511 SDLEKRNIKLNSI 523
D + ++L +I
Sbjct: 572 PDEDGVYVQLYNI 584
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 84/383 (21%), Positives = 174/383 (45%), Gaps = 63/383 (16%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E+ +++ L C+ + G+ +H L+ + G+ ++ + +LI++YAKCG A+ +FD
Sbjct: 239 EVTVIAVLSACAKLKDLELGRSLHLLVEEKGMPTSENLVVALIDMYAKCGDFGHAQQVFD 298
Query: 83 SCST-LDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALE 141
+ P + N +I GY ++ ++ AR +FD+ ++ +++ SM+ G+ + REAL
Sbjct: 299 ALGRGPRPQSWNAIIDGYCKHGHVDVARSLFDEMEVRDIITFNSMMTGYIHSGQLREALL 358
Query: 142 VFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYC 201
+F MR + + T+ +++++ LG + + R LH + + +++ + + T LL+MY
Sbjct: 359 LFMSMRRHDLRVDNFTVVNLLTACASLGALQQGRALHACIEQRLVEADIYLGTALLDMYM 418
Query: 202 VCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDG 261
C + EA +F M +R++ +W M+ G A G+ + A E F +
Sbjct: 419 KCGRVDEATIVFQRMGKRDVHTWTAMIAGLAFNGMGKAALEHFYQ--------------- 463
Query: 262 YLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCY 321
M CDG PN V + +++AC + E
Sbjct: 464 ----------------MRCDGFQPNSVSYIAVLTACSHSCLLNE---------------- 491
Query: 322 DFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ- 380
GR+ ++ I I + +I R+G++++A L M
Sbjct: 492 --------------GRLYFDEMRILYNIHPQIEHYGCMIDLLGRSGLLDEAMDLVKTMPI 537
Query: 381 KRDVYSWSAMISGYAQNEQPNMA 403
+ + W++++S ++ ++A
Sbjct: 538 QPNAVIWASILSACRVHKHIDLA 560
>gi|359495698|ref|XP_003635064.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Vitis vinifera]
Length = 650
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 163/438 (37%), Positives = 270/438 (61%), Gaps = 3/438 (0%)
Query: 227 MLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPN 286
+L +K ++ A +F+ + +V + +IDG++ +A+ +Y ML D I P+
Sbjct: 87 LLRSCSKCHAIDYASRIFQYTHNPNVYLYTALIDGFVSSGNYFDAIQLYSRMLHDSILPD 146
Query: 287 DVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFE 346
+ ++ ++ ACG +A EG ++HS +K G ++ I+ Y CG + AR FE
Sbjct: 147 NYLMASILKACGSQLALREGREVHSRALKLGLSSNRLVRLRIMELYGKCGELGDARRVFE 206
Query: 347 LGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALEL 406
+D +AS +I+ + G++E+A +F+ ++++D W+AMI G+ +NE+ N ALE
Sbjct: 207 EMPEDVVAS-TVMISSYSDQGLVEEAGAVFSRVRRKDTVCWTAMIDGFVRNEEMNRALEA 265
Query: 407 FHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAK 466
F GM V+PNE T+V V A + G L+ GRW H Y+ I LN + A+I+MY++
Sbjct: 266 FRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNALINMYSR 325
Query: 467 CGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFI 526
CGSI+ A VF ++DR V +N +I GL+M+G + ++++ + R ++ ++TF+
Sbjct: 326 CGSIDEAQTVFDEMKDR--DVITYNTMISGLSMNGKSRQAIELFRVMIGRRLRPTNVTFV 383
Query: 527 GVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPM 586
GVL+ C H GLVD G + F SM Y VEP ++HYGCMVDLLGR G+LE+A ++IR+M M
Sbjct: 384 GVLNACSHGGLVDFGFKIFHSMTRDYGVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTMKM 443
Query: 587 KADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSI 646
D ++ GTLL+A ++H N+E+GE+ AK L + + VLLS++YA +G+W++A +
Sbjct: 444 TPDHIMLGTLLSACKMHKNLELGEQVAKVLEDRGQADSGTYVLLSHVYASSGKWKEAAQV 503
Query: 647 RKEMRDCGMKRLPGFSGV 664
R +M++ GM++ PG S +
Sbjct: 504 RAKMKEAGMQKEPGCSSI 521
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 104/353 (29%), Positives = 172/353 (48%), Gaps = 47/353 (13%)
Query: 26 LVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCS 85
+ S L+ C + +A+ +G+++HS K GL SN ++ ++ LY KCG + A+ +F+
Sbjct: 150 MASILKACGSQLALREGREVHSRALKLGLSSNRLVRLRIMELYGKCGELGDARRVFEEMP 209
Query: 86 TLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRD 145
D VA +MIS Y + +A VF + K V +T+MI GF +N+ ALE FR
Sbjct: 210 E-DVVASTVMISSYSDQGLVEEAGAVFSRVRRKDTVCWTAMIDGFVRNEEMNRALEAFRG 268
Query: 146 MRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSS 205
M+ V PNE T+ V+S+ LG + R +H + K I+ + + L+NMY C S
Sbjct: 269 MQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNALINMYSRCGS 328
Query: 206 LVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELF-----ERIPSKDVV------- 253
+ EA+++FDEMK+R+++++N M++G + G A ELF R+ +V
Sbjct: 329 IDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIELFRVMIGRRLRPTNVTFVGVLNA 388
Query: 254 ----------------------------SWGTMIDGYLQVERLSEALTMYRAMLCDGIAP 285
+G M+D +V RL EA + R M + P
Sbjct: 389 CSHGGLVDFGFKIFHSMTRDYGVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTM---KMTP 445
Query: 286 NDVMIVDLISACGRAMAFGEGLQIHSIIVKAG-FDCYDFIQATIIHFYAACGR 337
+ +M+ L+SAC G Q+ ++ G D ++ + H YA+ G+
Sbjct: 446 DHIMLGTLLSACKMHKNLELGEQVAKVLEDRGQADSGTYV--LLSHVYASSGK 496
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 126/530 (23%), Positives = 240/530 (45%), Gaps = 78/530 (14%)
Query: 2 PLDHFHSVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQ 61
P H NS +L++ D + ++S L+ S HI +Q IH+ + ++G + F+
Sbjct: 29 PSPKPHPNSNSNPKSLKSLD-QKQIISLLQR-SKHI--NQVLPIHAQLIRNGHSQDPFMV 84
Query: 62 NSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCV 121
L+ +KC I A +F T +P N+ +
Sbjct: 85 FELLRSCSKCHAIDYASRIFQY--THNP---NVYL------------------------- 114
Query: 122 SYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLV 181
YT++I GF + + +A++++ M ++P+ +AS++ + + E R +H
Sbjct: 115 -YTALIDGFVSSGNYFDAIQLYSRMLHDSILPDNYLMASILKACGSQLALREGREVHSRA 173
Query: 182 IKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELAR 241
+KL + ++ ++ +Y C L +AR +F+EM E ++V+ VM++ ++ GLVE A
Sbjct: 174 LKLGLSSNRLVRLRIMELYGKCGELGDARRVFEEMPE-DVVASTVMISSYSDQGLVEEAG 232
Query: 242 ELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAM 301
+F R+ KD V W MIDG+++ E ++ AL +R M + + PN+ IV ++SAC +
Sbjct: 233 AVFSRVRRKDTVCWTAMIDGFVRNEEMNRALEAFRGMQGENVRPNEFTIVCVLSACSQLG 292
Query: 302 AFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIA 361
A G +HS + K + F+ +I+ Y+ CG I+ A+ F+ + ++N +I+
Sbjct: 293 ALEIGRWVHSYMRKFEIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMIS 352
Query: 362 GFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEIT 421
G NG +RQ A+ELF M+ ++P +T
Sbjct: 353 GLSMNG---KSRQ----------------------------AIELFRVMIGRRLRPTNVT 381
Query: 422 MVSVFCAIASSGTLKEG-RWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHI 480
V V A + G + G + H + + ++D+ + G + A+++
Sbjct: 382 FVGVLNACSHGGLVDFGFKIFHSMTRDYGVEPQIEHYGCMVDLLGRVGRLEEAYDLI--- 438
Query: 481 RDRTTSVSP----WNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFI 526
RT ++P ++ MH + L ++ LE R + +S T++
Sbjct: 439 --RTMKMTPDHIMLGTLLSACKMHKNLELGEQVAKVLEDRG-QADSGTYV 485
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/341 (21%), Positives = 139/341 (40%), Gaps = 61/341 (17%)
Query: 293 LISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDH 352
+IS R+ + L IH+ +++ G F+ ++ + C I+ A F+ +
Sbjct: 52 IISLLQRSKHINQVLPIHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIFQYTHNPN 111
Query: 353 IASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVD 412
+ + ALI GF+ +G DA QL++ M+
Sbjct: 112 VYLYTALIDGFVSSGNYFDAIQLYSR-------------------------------MLH 140
Query: 413 AGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINT 472
+ P+ M S+ A S L+EGR H L ++ N + I+++Y KCG +
Sbjct: 141 DSILPDNYLMASILKACGSQLALREGREVHSRALKLGLSSNRLVRLRIMELYGKCGELGD 200
Query: 473 AFEVFYHI----------------------------RDRTTSVSPWNAIICGLAMHGDAN 504
A VF + R R W A+I G + + N
Sbjct: 201 ARRVFEEMPEDVVASTVMISSYSDQGLVEEAGAVFSRVRRKDTVCWTAMIDGFVRNEEMN 260
Query: 505 LTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCM 564
L+ + ++ N++ N T + VLS C G +++G R+ S + +E +L +
Sbjct: 261 RALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIG-RWVHSYMRKFEIELNLFVGNAL 319
Query: 565 VDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGN 605
+++ R G +++A+ V M + DV+ + T+++ ++G
Sbjct: 320 INMYSRCGSIDEAQTVFDEMKDR-DVITYNTMISGLSMNGK 359
>gi|449475532|ref|XP_004154482.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 642
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 179/452 (39%), Positives = 259/452 (57%), Gaps = 30/452 (6%)
Query: 237 VELARELFERIPSKDVVSWGTMI-------DGYLQVERLSEALTMYRAMLCDG-IAPNDV 288
++ AR +F ++P + W T++ D +LQ SEAL ++ AMLCDG + PN
Sbjct: 68 IDYARAVFRQMPEPNCFCWNTILRILAETNDEHLQ----SEALMLFSAMLCDGRVKPNRF 123
Query: 289 MIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLA------- 341
++ AC RA EG QIH +IVK GF +F+ + ++ Y C + A
Sbjct: 124 TFPSVLKACARASRLREGKQIHGLIVKFGFHEDEFVISNLVRMYVMCAVMEDAYSLFCKN 183
Query: 342 ------RLQFELGIKDH---IASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMIS 392
Q EL + + WN +I G +R G I+ A+ LF+ M R V SW+ MIS
Sbjct: 184 VVDFDGSCQMELDKRKQDGNVVLWNIMIDGQVRLGDIKSAKNLFDEMPPRSVVSWNVMIS 243
Query: 393 GYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITL 452
GYAQN A+ LF M + + PN +T+VSV AIA G L+ G+W H Y N + +
Sbjct: 244 GYAQNGHFIEAINLFQEMQSSNIDPNYVTLVSVLPAIARIGALELGKWIHLYAGKNKVEI 303
Query: 453 NDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSD 512
+D L +A++DMY+KCGSI+ A +VF + R W+AII AMHG A + +
Sbjct: 304 DDVLGSALVDMYSKCGSIDKALQVFETLPKRNAIT--WSAIIGAFAMHGRAEDAIIHFHL 361
Query: 513 LEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAG 572
+ K + N + +IG+LS C HAGLV+ G +F M V ++P ++HYGCMVDLLGRAG
Sbjct: 362 MGKAGVTPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGRAG 421
Query: 573 QLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSN 632
LE+AEE+IR+MP++ D VIW LL A ++H N+++GER A++L L P S V LSN
Sbjct: 422 HLEEAEELIRNMPIEPDDVIWKALLGACKMHKNLKMGERVAETLMELAPHDSGSYVALSN 481
Query: 633 IYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
+YA G WE +R +M+ +++ PG S +
Sbjct: 482 LYASLGNWEAVARVRLKMKGMDIRKDPGCSWI 513
Score = 155 bits (391), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 116/434 (26%), Positives = 196/434 (45%), Gaps = 67/434 (15%)
Query: 108 AREVFDKTPIKCCVSYTSMIMGFAQND---CWREALEVFRDMRILG-VIPNEVTLASVIS 163
AR VF + P C + +++ A+ + EAL +F M G V PN T SV+
Sbjct: 71 ARAVFRQMPEPNCFCWNTILRILAETNDEHLQSEALMLFSAMLCDGRVKPNRFTFPSVLK 130
Query: 164 SSVHLGGIWECRMLHGLVIKLMI--DGFVIISTNLLNMYCVCSSLVEARSLF-------- 213
+ + E + +HGL++K D FVI +NL+ MY +C+ + +A SLF
Sbjct: 131 ACARASRLREGKQIHGLIVKFGFHEDEFVI--SNLVRMYVMCAVMEDAYSLFCKNVVDFD 188
Query: 214 -------DEMKER-NIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQV 265
D+ K+ N+V WN+M++G + G ++ A+ LF+ +P + VVSW MI GY Q
Sbjct: 189 GSCQMELDKRKQDGNVVLWNIMIDGQVRLGDIKSAKNLFDEMPPRSVVSWNVMISGYAQN 248
Query: 266 ERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQ 325
EA+ +++ M I PN V +V ++ A R A G IH K + D +
Sbjct: 249 GHFIEAINLFQEMQSSNIDPNYVTLVSVLPAIARIGALELGKWIHLYAGKNKVEIDDVLG 308
Query: 326 ATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVY 385
+ ++ Y+ CG I+ A FE K + +W+A+I F +G ED
Sbjct: 309 SALVDMYSKCGSIDKALQVFETLPKRNAITWSAIIGAFAMHGRAED-------------- 354
Query: 386 SWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYV 445
A+ FH M AGV PN++ + + A + +G ++EGR ++
Sbjct: 355 -----------------AIIHFHLMGKAGVTPNDVAYIGILSACSHAGLVEEGRSFFSHM 397
Query: 446 LNNSITLNDNLS--AAIIDMYAKCGSINTAFEVFYHIRDRTTSVSP----WNAIICGLAM 499
+ + L + ++D+ + G + A E+ R + P W A++ M
Sbjct: 398 V-KVVGLQPRIEHYGCMVDLLGRAGHLEEAEELI-----RNMPIEPDDVIWKALLGACKM 451
Query: 500 HGDANLTLKIYSDL 513
H + + ++ L
Sbjct: 452 HKNLKMGERVAETL 465
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 97/381 (25%), Positives = 170/381 (44%), Gaps = 78/381 (20%)
Query: 28 SALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMF------ 81
S L+ C+ + +G+QIH LI K G + F+ ++L+ +Y C ++ A S+F
Sbjct: 127 SVLKACARASRLREGKQIHGLIVKFGFHEDEFVISNLVRMYVMCAVMEDAYSLFCKNVVD 186
Query: 82 --DSCS-TLDP-------VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFA 131
SC LD V NIMI G +R + A+ +FD+ P + VS+ MI G+A
Sbjct: 187 FDGSCQMELDKRKQDGNVVLWNIMIDGQVRLGDIKSAKNLFDEMPPRSVVSWNVMISGYA 246
Query: 132 QNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVI 191
QN + EA+ +F++M+ + PN VTL SV+ + +G + + +H K ++ +
Sbjct: 247 QNGHFIEAINLFQEMQSSNIDPNYVTLVSVLPAIARIGALELGKWIHLYAGKNKVEIDDV 306
Query: 192 ISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKD 251
+ + L++MY C S+ +A +F+ + +RN ++W+ ++ FA G
Sbjct: 307 LGSALVDMYSKCGSIDKALQVFETLPKRNAITWSAIIGAFAMHG---------------- 350
Query: 252 VVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHS 311
R +A+ + M G+ PNDV + ++SAC A EG S
Sbjct: 351 ---------------RAEDAIIHFHLMGKAGVTPNDVAYIGILSACSHAGLVEEGRSFFS 395
Query: 312 IIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIED 371
+VK +G++ I + ++ R G +E+
Sbjct: 396 HMVKV------------------------------VGLQPRIEHYGCMVDLLGRAGHLEE 425
Query: 372 ARQLFNNMQ-KRDVYSWSAMI 391
A +L NM + D W A++
Sbjct: 426 AEELIRNMPIEPDDVIWKALL 446
Score = 47.8 bits (112), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 51/253 (20%), Positives = 104/253 (41%), Gaps = 63/253 (24%)
Query: 8 SVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINL 67
++F +++ + +Y + LVS L + A+ G+ IH K+ +E + + ++L+++
Sbjct: 256 NLFQEMQSSNIDPNY-VTLVSVLPAIARIGALELGKWIHLYAGKNKVEIDDVLGSALVDM 314
Query: 68 YAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMI 127
Y+KCG I +A +F++ P + ++++++I
Sbjct: 315 YSKCGSIDKALQVFET-------------------------------LPKRNAITWSAII 343
Query: 128 MGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMID 187
FA + +A+ F M GV PN+V ++S+ H G + E R ++K++
Sbjct: 344 GAFAMHGRAEDAIIHFHLMGKAGVTPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVV-- 401
Query: 188 GFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERI 247
G + I + M++ +AG +E A EL +
Sbjct: 402 GL----------------------------QPRIEHYGCMVDLLGRAGHLEEAEELIRNM 433
Query: 248 P-SKDVVSWGTMI 259
P D V W ++
Sbjct: 434 PIEPDDVIWKALL 446
>gi|356546772|ref|XP_003541796.1| PREDICTED: pentatricopeptide repeat-containing protein At1g53600,
mitochondrial-like [Glycine max]
Length = 713
Score = 333 bits (855), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 202/635 (31%), Positives = 330/635 (51%), Gaps = 62/635 (9%)
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
+ CN I+ RN + +A +F K PIK S+T+M+ FAQN + A +F +M
Sbjct: 42 IQCNTQIAENGRNGNVKEAESIFHKMPIKNTASWTAMLTAFAQNGQIQNARRLFDEMPQR 101
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRML---HGLV-IKLMIDGFV--------------- 190
+ N +++ I + ++G +E + LV MI GFV
Sbjct: 102 TTVSNNAMISAYIRNGCNVGKAYELFSVLAERNLVSYAAMIMGFVKAGKFHMAEKLYRET 161
Query: 191 -------IISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELAREL 243
S L+N Y + EA +F+ M ER++VSW+ M++G + G V AR+L
Sbjct: 162 PYEFRDPACSNALINGYLKMGEVNEALRIFENMGERDVVSWSAMVDGLCRDGRVAAARDL 221
Query: 244 FERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAP-NDVMIVDLISACGRAMA 302
F+R+P ++VVSW MIDGY+ E ++ M +G+ N + + ACG
Sbjct: 222 FDRMPDRNVVSWSAMIDGYMGEGFFQEGFCLFMDMKREGLVEVNSTTMTIMFKACGNCGR 281
Query: 303 FGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLA--------------------- 341
EG+QIH ++ + GF+ + + ++I Y+ G ++A
Sbjct: 282 MSEGMQIHGLVSRLGFEFDNVLSNSVITMYSMLGCTDMADKVFCTVSDKDIVTWNSLISG 341
Query: 342 -----------RLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAM 390
R+ + +KD + SW A+IAGF ++G +E+A +LFN + +D + W+A+
Sbjct: 342 YIHNNEVEAAYRVFGRMPVKD-VISWTAMIAGFSKSGRVENAIELFNMLPAKDDFVWTAI 400
Query: 391 ISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSI 450
ISG+ N + AL + M+ G KPN +T+ SV A A+ L EG H +L ++
Sbjct: 401 ISGFVNNNEYEEALHWYARMIWEGCKPNPLTISSVLAASAALVALNEGLQIHTCILKMNL 460
Query: 451 TLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIY 510
N ++ ++I Y+K G++ A+ +F + + +V +N+II G A +G + L IY
Sbjct: 461 EYNLSIQNSLISFYSKSGNVVDAYRIFLDVIE--PNVISYNSIISGFAQNGFGDEALGIY 518
Query: 511 SDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGR 570
++ + N +TF+ VLS C HAGLVD G F +MKS Y +EP+ HY CMVD+LGR
Sbjct: 519 KKMQSEGHEPNHVTFLAVLSACTHAGLVDEGWNIFNTMKSHYGIEPEADHYACMVDILGR 578
Query: 571 AGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLL 630
AG L++A ++IRSMP K +WG +L AS+ H +++ + AA+ + L+P + V+L
Sbjct: 579 AGLLDEAIDLIRSMPFKPHSGVWGAILGASKTHLRLDLAKLAAQRITDLEPKNATPYVVL 638
Query: 631 SNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGVV 665
SN+Y+ AG+ D ++ G+K+ PG S +
Sbjct: 639 SNMYSAAGKKIDGDLVKMAKNLKGIKKSPGCSWIT 673
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 130/497 (26%), Positives = 234/497 (47%), Gaps = 78/497 (15%)
Query: 62 NSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCV 121
N+LIN Y K G +++A +F++ D V+ + M+ G R+ R+ AR++FD+ P + V
Sbjct: 172 NALINGYLKMGEVNEALRIFENMGERDVVSWSAMVDGLCRDGRVAAARDLFDRMPDRNVV 231
Query: 122 SYTSMIMGFAQNDCWREALEVFRDMRILGVIP-NEVTLASVISSSVHLGGIWECRMLHGL 180
S+++MI G+ ++E +F DM+ G++ N T+ + + + G + E +HGL
Sbjct: 232 SWSAMIDGYMGEGFFQEGFCLFMDMKREGLVEVNSTTMTIMFKACGNCGRMSEGMQIHGL 291
Query: 181 VIKLMIDGFVIISTNLLNMYCV--CSSLVE-----------------------------A 209
V +L + ++S +++ MY + C+ + + A
Sbjct: 292 VSRLGFEFDNVLSNSVITMYSMLGCTDMADKVFCTVSDKDIVTWNSLISGYIHNNEVEAA 351
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLS 269
+F M ++++SW M+ GF+K+G VE A ELF +P+KD W +I G++
Sbjct: 352 YRVFGRMPVKDVISWTAMIAGFSKSGRVENAIELFNMLPAKDDFVWTAIISGFVNNNEYE 411
Query: 270 EALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATII 329
EAL Y M+ +G PN + I +++A +A EGLQIH+ I+K + IQ ++I
Sbjct: 412 EALHWYARMIWEGCKPNPLTISSVLAASAALVALNEGLQIHTCILKMNLEYNLSIQNSLI 471
Query: 330 HFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSA 389
FY+ G + A F I+ ++ S+N++I+GF +NG ++A ++ MQ
Sbjct: 472 SFYSKSGNVVDAYRIFLDVIEPNVISYNSIISGFAQNGFGDEALGIYKKMQSE------- 524
Query: 390 MISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNN- 448
G +PN +T ++V A +G + EG W + +
Sbjct: 525 ------------------------GHEPNHVTFLAVLSACTHAGLVDEG-WNIFNTMKSH 559
Query: 449 -SITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSP----WNAIICGLAMH--- 500
I + A ++D+ + G ++ A ++ R+ P W AI+ H
Sbjct: 560 YGIEPEADHYACMVDILGRAGLLDEAIDLI-----RSMPFKPHSGVWGAILGASKTHLRL 614
Query: 501 GDANLTLKIYSDLEKRN 517
A L + +DLE +N
Sbjct: 615 DLAKLAAQRITDLEPKN 631
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 96/397 (24%), Positives = 180/397 (45%), Gaps = 75/397 (18%)
Query: 39 VSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISG 98
+S+G QIH L+ + G E + + NS+I +Y+ G A +F + S D V N +ISG
Sbjct: 282 MSEGMQIHGLVSRLGFEFDNVLSNSVITMYSMLGCTDMADKVFCTVSDKDIVTWNSLISG 341
Query: 99 YIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQ-------------------------- 132
YI N+ + A VF + P+K +S+T+MI GF++
Sbjct: 342 YIHNNEVEAAYRVFGRMPVKDVISWTAMIAGFSKSGRVENAIELFNMLPAKDDFVWTAII 401
Query: 133 -----NDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMID 187
N+ + EAL + M G PN +T++SV+++S L + E +H ++K+ ++
Sbjct: 402 SGFVNNNEYEEALHWYARMIWEGCKPNPLTISSVLAASAALVALNEGLQIHTCILKMNLE 461
Query: 188 GFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERI 247
+ I +L++ Y ++V+A +F ++ E N++S+N +++GFA+ G +
Sbjct: 462 YNLSIQNSLISFYSKSGNVVDAYRIFLDVIEPNVISYNSIISGFAQNGFGD--------- 512
Query: 248 PSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGL 307
EAL +Y+ M +G PN V + ++SAC A EG
Sbjct: 513 ----------------------EALGIYKKMQSEGHEPNHVTFLAVLSACTHAGLVDEGW 550
Query: 308 QIHSII-----VKAGFDCYDFIQATIIHFYAACGRINLA-RLQFELGIKDHIASWNALIA 361
I + + ++ D Y A ++ G ++ A L + K H W A++
Sbjct: 551 NIFNTMKSHYGIEPEADHY----ACMVDILGRAGLLDEAIDLIRSMPFKPHSGVWGAILG 606
Query: 362 G---FIRNGMIEDARQLFNNMQKRDVYSWSAMISGYA 395
+R + + A Q +++ ++ + + + Y+
Sbjct: 607 ASKTHLRLDLAKLAAQRITDLEPKNATPYVVLSNMYS 643
>gi|147775281|emb|CAN61593.1| hypothetical protein VITISV_030555 [Vitis vinifera]
Length = 673
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 187/458 (40%), Positives = 261/458 (56%), Gaps = 38/458 (8%)
Query: 238 ELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISAC 297
E + +F+ + +V W MI ++ +A+ +Y M+ PN ++ AC
Sbjct: 89 ESSLRVFDFVRKPNVFLWNCMIKVCIENNEPFKAILLYYEMVVAHSRPNKYTYPAVLKAC 148
Query: 298 GRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLAR--------------- 342
+ EG+Q+H+ +VK G I ++ I YA+ GR+ AR
Sbjct: 149 SDSGVVAEGVQVHAHLVKHGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGEVDAVCW 208
Query: 343 -------LQF-------EL--GIKDH--IASWNALIAGFIRNGMIEDARQLFNNMQKRDV 384
L+F EL G+ D I++WNA+I+GF R GM+E AR+ F+ M++RD
Sbjct: 209 NAMIDGYLRFGEVEAARELFEGMPDRSMISTWNAMISGFSRCGMVEVAREFFDEMKERDE 268
Query: 385 YSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEY 444
SWSAMI GY Q ALE+FH M ++P + + SV A A+ G L +GRW H Y
Sbjct: 269 ISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQGRWIHTY 328
Query: 445 VLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDAN 504
NSI L+ L +++DMYAKCG I+ A+EVF + ++ VS WNA+I GLAMHG A
Sbjct: 329 AKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNK--EVSSWNAMIGGLAMHGRAE 386
Query: 505 LTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCM 564
+ ++S K +I N ITF+GVL+ C H GLV G F SM+ Y VEP ++HYGC+
Sbjct: 387 DAIDLFS---KMDIYPNEITFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCI 443
Query: 565 VDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHG 624
VDLLGRAG L +AE+V+ S+P + +WG LL A R HGNVE+GER K L L+P +
Sbjct: 444 VDLLGRAGLLTEAEKVVSSIPTEPTPAVWGALLGACRKHGNVELGERVGKILLELEPQNS 503
Query: 625 PSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
LLSNIYA AGRWE+ +RK M++ G+K PG S
Sbjct: 504 GRYTLLSNIYAKAGRWEEVGEVRKLMKERGIKTTPGTS 541
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 133/521 (25%), Positives = 214/521 (41%), Gaps = 116/521 (22%)
Query: 43 QQIHSLIFKSGLESNTFIQNSLINLYAKCGL-----ISQAKSMFDSCSTLDPVACNIMIS 97
+Q H+LI ++G +++I SL+ YA + +FD + N MI
Sbjct: 52 KQAHALILRTGHLQDSYIAGSLVKSYANVSTNRYLSFESSLRVFDFVRKPNVFLWNCMIK 111
Query: 98 GYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVT 157
I N+ P K + Y M++ ++ PN+ T
Sbjct: 112 VCIENNE-----------PFKAILLYYEMVVAHSR--------------------PNKYT 140
Query: 158 LASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEAR------- 210
+V+ + G + E +H ++K + G I ++ + MY LVEAR
Sbjct: 141 YPAVLKACSDSGVVAEGVQVHAHLVKHGLGGDGHILSSAIRMYASFGRLVEARRILDDKG 200
Query: 211 -------------------------SLFDEMKERNIVS-WNVMLNGFAKAGLVELARELF 244
LF+ M +R+++S WN M++GF++ G+VE+ARE F
Sbjct: 201 GEVDAVCWNAMIDGYLRFGEVEAARELFEGMPDRSMISTWNAMISGFSRCGMVEVAREFF 260
Query: 245 ERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFG 304
+ + +D +SW MIDGY+Q EAL ++ M + I P ++ ++SAC A
Sbjct: 261 DEMKERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALD 320
Query: 305 EGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFI 364
+G IH+ + + +++ YA CGRI+LA FE ++SWNA+I G
Sbjct: 321 QGRWIHTYAKRNSIQLDGVLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLA 380
Query: 365 RNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVS 424
+G EDA LF+ M D+Y PNEIT V
Sbjct: 381 MHGRAEDAIDLFSKM---DIY-------------------------------PNEITFVG 406
Query: 425 VFCAIASSGTLKEG-----RWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYH 479
V A A G +++G EY + I I+D+ + G + A +V
Sbjct: 407 VLNACAHGGLVQKGLTIFNSMRKEYGVEPQI----EHYGCIVDLLGRAGLLTEAEKVVSS 462
Query: 480 IRDRTTSVSPWNAIICGLAMHGDANL---TLKIYSDLEKRN 517
I T + W A++ HG+ L KI +LE +N
Sbjct: 463 IPTEPTP-AVWGALLGACRKHGNVELGERVGKILLELEPQN 502
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 93/380 (24%), Positives = 167/380 (43%), Gaps = 73/380 (19%)
Query: 28 SALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMF-DSCST 86
+ L+ CS V++G Q+H+ + K GL + I +S I +YA G + +A+ + D
Sbjct: 143 AVLKACSDSGVVAEGVQVHAHLVKHGLGGDGHILSSAIRMYASFGRLVEARRILDDKGGE 202
Query: 87 LDPVACNIMISGYIRNDRLNDAREVFDKTPIKCC-------------------------- 120
+D V N MI GY+R + ARE+F+ P +
Sbjct: 203 VDAVCWNAMIDGYLRFGEVEAARELFEGMPDRSMISTWNAMISGFSRCGMVEVAREFFDE 262
Query: 121 ------VSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWEC 174
+S+++MI G+ Q C+ EALE+F M+ + P + L SV+S+ +LG + +
Sbjct: 263 MKERDEISWSAMIDGYIQEGCFMEALEIFHQMQKEKIRPRKFVLPSVLSACANLGALDQG 322
Query: 175 RMLHGLVIK--LMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFA 232
R +H + + +DG ++ T+L++MY C + A +F++M + + SWN M+ G A
Sbjct: 323 RWIHTYAKRNSIQLDG--VLGTSLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLA 380
Query: 233 KAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVD 292
G E A +LF ++ I PN++ V
Sbjct: 381 MHGRAEDAIDLFSKM----------------------------------DIYPNEITFVG 406
Query: 293 LISACGRAMAFGEGLQI-HSIIVKAGFDCYDFIQATIIHFYAACGRINLA-RLQFELGIK 350
+++AC +GL I +S+ + G + I+ G + A ++ + +
Sbjct: 407 VLNACAHGGLVQKGLTIFNSMRKEYGVEPQIEHYGCIVDLLGRAGLLTEAEKVVSSIPTE 466
Query: 351 DHIASWNALIAGFIRNGMIE 370
A W AL+ ++G +E
Sbjct: 467 PTPAVWGALLGACRKHGNVE 486
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 76/154 (49%), Gaps = 7/154 (4%)
Query: 3 LDHFHSVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQN 62
L+ FH + QK ++ + L S L C+ A+ QG+ IH+ ++ ++ + +
Sbjct: 288 LEIFHQM---QKEKIRPRKF--VLPSVLSACANLGALDQGRWIHTYAKRNSIQLDGVLGT 342
Query: 63 SLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPI-KCCV 121
SL+++YAKCG I A +F+ S + + N MI G + R DA ++F K I +
Sbjct: 343 SLVDMYAKCGRIDLAWEVFEKMSNKEVSSWNAMIGGLAMHGRAEDAIDLFSKMDIYPNEI 402
Query: 122 SYTSMIMGFAQNDCWREALEVFRDMRI-LGVIPN 154
++ ++ A ++ L +F MR GV P
Sbjct: 403 TFVGVLNACAHGGLVQKGLTIFNSMRKEYGVEPQ 436
>gi|225463844|ref|XP_002265179.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 617
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 181/544 (33%), Positives = 290/544 (53%), Gaps = 66/544 (12%)
Query: 123 YTSMIMGFA-QNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLV 181
Y ++I G A N+ E L V++ M G++P+ T+ V+ + + E +HG
Sbjct: 92 YNAIIRGLATSNNDSIEGLVVYKQMLSKGIVPDNYTIPFVLKACAESRAVREGEEVHGQA 151
Query: 182 IKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELAR 241
IK+ + V +S L+ MY VC ++ AR
Sbjct: 152 IKMGLASDVYVSNTLMRMYAVCD-------------------------------VIRSAR 180
Query: 242 ELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAM 301
++F+ P +D+VSW TMI GY+++ E + ++ M + + + + +V ++S+C R
Sbjct: 181 KVFDTSPQRDLVSWTTMIQGYVKMGFAREGVGLFFEMCGENLQADGMTLVIVLSSCARLG 240
Query: 302 AFGEGLQIHSIIVKAGFDCYD-FIQATIIHFYAACGRINLARLQFELGIKDHIASWNALI 360
G ++H I++ D F+ ++ Y CG N A
Sbjct: 241 DLRLGRKLHRYIIRNSNVNLDVFVGNALVDMYLKCGDANFA------------------- 281
Query: 361 AGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEI 420
R++F M ++V SW++MISG AQ Q +L +F M GVKP+++
Sbjct: 282 ------------RKVFQEMPVKNVVSWNSMISGLAQKGQFKESLYMFRKMQRLGVKPDDV 329
Query: 421 TMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHI 480
T+V+V + A+ G L+ G+W H Y+ N I + + A++DMYAKCGSI+ A VF +
Sbjct: 330 TLVAVLNSCANLGVLELGKWVHAYLDRNQIRADGFIGNALVDMYAKCGSIDQACWVFQAM 389
Query: 481 RDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDL 540
+ V + A+I GLAMHG L ++S++ K I+ + +TF+GVL+ C H GLV+
Sbjct: 390 NRK--DVYSYTAMIVGLAMHGQGGKALDLFSEMPKMGIEPDEVTFVGVLTACSHVGLVEE 447
Query: 541 GERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAAS 600
G +YF+ M ++YN+ P L+HYGCMVDLLGRAG + +AEE IR+MP++ D + G LL A
Sbjct: 448 GRKYFEDMSTIYNLRPQLEHYGCMVDLLGRAGLINEAEEFIRNMPIEPDAFVLGALLGAC 507
Query: 601 RIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPG 660
+IHG VE+GE K + ++P + VL+SNIY+ A RW DA +RK M++ +++ PG
Sbjct: 508 KIHGKVELGESVMKKIEKIEPRKDGAYVLMSNIYSSANRWRDALKLRKTMKERNLEKTPG 567
Query: 661 FSGV 664
S +
Sbjct: 568 CSSI 571
Score = 169 bits (429), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 133/504 (26%), Positives = 218/504 (43%), Gaps = 112/504 (22%)
Query: 21 DYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSM 80
+Y + V L+ C+ AV +G+++H K GL S+ ++ N+L+ +YA C
Sbjct: 125 NYTIPFV--LKACAESRAVREGEEVHGQAIKMGLASDVYVSNTLMRMYAVC--------- 173
Query: 81 FDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREAL 140
D + AR+VFD +P + VS+T+MI G+ + RE +
Sbjct: 174 ----------------------DVIRSARKVFDTSPQRDLVSWTTMIQGYVKMGFAREGV 211
Query: 141 EVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIK---LMIDGFVIISTNLL 197
+F +M + + +TL V+SS LG + R LH +I+ + +D FV L+
Sbjct: 212 GLFFEMCGENLQADGMTLVIVLSSCARLGDLRLGRKLHRYIIRNSNVNLDVFV--GNALV 269
Query: 198 NMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGT 257
+MY C G AR++F+ +P K+VVSW +
Sbjct: 270 DMYLKC-------------------------------GDANFARKVFQEMPVKNVVSWNS 298
Query: 258 MIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAG 317
MI G Q + E+L M+R M G+ P+DV +V ++++C G +H+ + +
Sbjct: 299 MISGLAQKGQFKESLYMFRKMQRLGVKPDDVTLVAVLNSCANLGVLELGKWVHAYLDRNQ 358
Query: 318 FDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFN 377
FI ++ YA CG I+ A W +F
Sbjct: 359 IRADGFIGNALVDMYAKCGSIDQ-------------ACW------------------VFQ 387
Query: 378 NMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKE 437
M ++DVYS++AMI G A + Q AL+LF M G++P+E+T V V A + G ++E
Sbjct: 388 AMNRKDVYSYTAMIVGLAMHGQGGKALDLFSEMPKMGIEPDEVTFVGVLTACSHVGLVEE 447
Query: 438 GRWAHEYVLNNSITLNDNLS--AAIIDMYAKCGSINTAFEVFYHIRDRTTSVSP----WN 491
GR E ++ L L ++D+ + G IN A E R + P
Sbjct: 448 GRKYFED-MSTIYNLRPQLEHYGCMVDLLGRAGLINEAEEFI-----RNMPIEPDAFVLG 501
Query: 492 AIICGLAMHGDANLTLKIYSDLEK 515
A++ +HG L + +EK
Sbjct: 502 ALLGACKIHGKVELGESVMKKIEK 525
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 134/290 (46%), Gaps = 10/290 (3%)
Query: 372 ARQLFNNMQKRDVYSWSAMISGYAQNEQPNM-ALELFHGMVDAGVKPNEITMVSVFCAIA 430
A L ++ ++ ++A+I G A + ++ L ++ M+ G+ P+ T+ V A A
Sbjct: 77 ALSLLAQLRTPNLPLYNAIIRGLATSNNDSIEGLVVYKQMLSKGIVPDNYTIPFVLKACA 136
Query: 431 SSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPW 490
S ++EG H + + + +S ++ MYA C I +A +VF R + W
Sbjct: 137 ESRAVREGEEVHGQAIKMGLASDVYVSNTLMRMYAVCDVIRSARKVFDTSPQR--DLVSW 194
Query: 491 NAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKS 550
+I G G A + ++ ++ N++ + +T + VLS+C G + LG + + +
Sbjct: 195 TTMIQGYVKMGFAREGVGLFFEMCGENLQADGMTLVIVLSSCARLGDLRLGRKLHRYIIR 254
Query: 551 VYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGE 610
NV D+ +VD+ + G A +V + MP+K +VV W ++++ G +
Sbjct: 255 NSNVNLDVFVGNALVDMYLKCGDANFARKVFQEMPVK-NVVSWNSMISGLAQKGQFKESL 313
Query: 611 RAAKSLA--GLQPSHGPSRVLLSNI----YADAGRWEDAFSIRKEMRDCG 654
+ + G++P +L++ + G+W A+ R ++R G
Sbjct: 314 YMFRKMQRLGVKPDDVTLVAVLNSCANLGVLELGKWVHAYLDRNQIRADG 363
>gi|15221713|ref|NP_174428.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169458|sp|Q9C866.1|PPR65_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g31430
gi|12322531|gb|AAG51260.1|AC027135_1 PPR-repeat protein [Arabidopsis thaliana]
gi|332193234|gb|AEE31355.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 570
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 176/546 (32%), Positives = 304/546 (55%), Gaps = 38/546 (6%)
Query: 123 YTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVI 182
Y M+ A + + L +F ++R G+ P+ TL V+ S L + E +HG +
Sbjct: 14 YNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGYAV 73
Query: 183 KLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARE 242
K ++ +S +L+ MY A G +E+ +
Sbjct: 74 KAGLEFDSYVSNSLMGMY-------------------------------ASLGKIEITHK 102
Query: 243 LFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDG-IAPNDVMIVDLISACGRAM 301
+F+ +P +DVVSW +I Y+ R +A+ +++ M + + ++ IV +SAC
Sbjct: 103 VFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALK 162
Query: 302 AFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIA 361
G +I+ +V F+ I ++ + CG ++ AR F+ ++ W +++
Sbjct: 163 NLEIGERIYRFVVTE-FEMSVRIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVF 221
Query: 362 GFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEIT 421
G++ G I++AR LF +DV W+AM++GY Q + + ALELF M AG++P+
Sbjct: 222 GYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFV 281
Query: 422 MVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIR 481
+VS+ A +G L++G+W H Y+ N +T++ + A++DMYAKCG I TA EVFY I+
Sbjct: 282 LVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIK 341
Query: 482 DRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLG 541
+R T + W ++I GLAM+G + L +Y ++E ++L++ITF+ VL+ C H G V G
Sbjct: 342 ERDT--ASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEG 399
Query: 542 ERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKAD---VVIWGTLLA 598
+ F SM +NV+P +H C++DLL RAG L++AEE+I M ++D V ++ +LL+
Sbjct: 400 RKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKMRGESDETLVPVYCSLLS 459
Query: 599 ASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRL 658
A+R +GNV++ ER A+ L ++ S + LL+++YA A RWED ++R++M+D G+++
Sbjct: 460 AARNYGNVKIAERVAEKLEKVEVSDSSAHTLLASVYASANRWEDVTNVRRKMKDLGIRKF 519
Query: 659 PGFSGV 664
PG S +
Sbjct: 520 PGCSSI 525
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 131/497 (26%), Positives = 227/497 (45%), Gaps = 85/497 (17%)
Query: 39 VSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISG 98
V +G+++H K+GLE ++++ NSL+ +YA G
Sbjct: 62 VIEGEKVHGYAVKAGLEFDSYVSNSLMGMYASLG-------------------------- 95
Query: 99 YIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIP-NEVT 157
++ +VFD+ P + VS+ +I + N + +A+ VF+ M + +E T
Sbjct: 96 -----KIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEGT 150
Query: 158 LASVISSSVHLGGIWECRMLHGLVIKLMIDGFVI--------ISTNLLNMYCVCSSLVEA 209
+ S +S+ C L L I I FV+ I L++M+C C L +A
Sbjct: 151 IVSTLSA---------CSALKNLEIGERIYRFVVTEFEMSVRIGNALVDMFCKCGCLDKA 201
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLS 269
R++FD M+++N+ W M+ G+ G ++ AR LFER P KDVV W M++GY+Q R
Sbjct: 202 RAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFD 261
Query: 270 EALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATII 329
EAL ++R M GI P++ ++V L++ C + A +G IH I + + ++
Sbjct: 262 EALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALV 321
Query: 330 HFYAACGRINLA-RLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWS 388
YA CG I A + +E+ +D ASW +LI G NGM
Sbjct: 322 DMYAKCGCIETALEVFYEIKERD-TASWTSLIYGLAMNGM-------------------- 360
Query: 389 AMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWA-HEYVLN 447
AL+L++ M + GV+ + IT V+V A G + EGR H
Sbjct: 361 -----------SGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTER 409
Query: 448 NSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRT--TSVSPWNAIICGLAMHGDANL 505
+++ + +ID+ + G ++ A E+ +R + T V + +++ +G+ +
Sbjct: 410 HNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKI 469
Query: 506 TLKIYSDLEKRNIKLNS 522
++ LEK + +S
Sbjct: 470 AERVAEKLEKVEVSDSS 486
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 135/233 (57%), Gaps = 3/233 (1%)
Query: 12 SQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKC 71
SQ++NL+ E +VS L CSA + G++I+ + + E + I N+L++++ KC
Sbjct: 139 SQESNLKFD--EGTIVSTLSACSALKNLEIGERIYRFVV-TEFEMSVRIGNALVDMFCKC 195
Query: 72 GLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFA 131
G + +A+++FDS + M+ GY+ R+++AR +F+++P+K V +T+M+ G+
Sbjct: 196 GCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYV 255
Query: 132 QNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVI 191
Q + + EALE+FR M+ G+ P+ L S+++ G + + + +HG + + + +
Sbjct: 256 QFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKV 315
Query: 192 ISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELF 244
+ T L++MY C + A +F E+KER+ SW ++ G A G+ A +L+
Sbjct: 316 VGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLY 368
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/387 (19%), Positives = 162/387 (41%), Gaps = 62/387 (16%)
Query: 247 IPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEG 306
+ + ++ + M+ + ++ L ++ + G+ P++ + ++ + GR EG
Sbjct: 6 LQTPSLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEG 65
Query: 307 LQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRN 366
++H VKAG + ++ +++ YA+ G+I + F+ + + SWN LI+ ++ N
Sbjct: 66 EKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGN 125
Query: 367 GMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVF 426
G EDA +F M + ++ +K +E T+VS
Sbjct: 126 GRFEDAIGVFKRMSQ------------------------------ESNLKFDEGTIVSTL 155
Query: 427 CAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTS 486
A ++ L+ G + +V+ ++ + A++DM+ KCG ++ A VF +RD+
Sbjct: 156 SACSALKNLEIGERIYRFVV-TEFEMSVRIGNALVDMFCKCGCLDKARAVFDSMRDKNVK 214
Query: 487 V-----------------------SP------WNAIICGLAMHGDANLTLKIYSDLEKRN 517
SP W A++ G + L+++ ++
Sbjct: 215 CWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAG 274
Query: 518 IKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDA 577
I+ ++ + +L+ C G ++ G ++ + V D +VD+ + G +E A
Sbjct: 275 IRPDNFVLVSLLTGCAQTGALEQG-KWIHGYINENRVTVDKVVGTALVDMYAKCGCIETA 333
Query: 578 EEVIRSMPMKADVVIWGTLLAASRIHG 604
EV + + D W +L+ ++G
Sbjct: 334 LEVFYEIKER-DTASWTSLIYGLAMNG 359
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 65/136 (47%), Gaps = 8/136 (5%)
Query: 24 LALVSALRYCSAHIAVSQGQQI-HSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
+ V+ L C+ V++G++I HS+ + ++ + + LI+L + GL+ +A+ + D
Sbjct: 381 ITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELID 440
Query: 83 -----SCSTLDPVACNIMISG--YIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDC 135
S TL PV C+++ + Y E +K + ++T + +A +
Sbjct: 441 KMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVSDSSAHTLLASVYASANR 500
Query: 136 WREALEVFRDMRILGV 151
W + V R M+ LG+
Sbjct: 501 WEDVTNVRRKMKDLGI 516
>gi|242050732|ref|XP_002463110.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
gi|241926487|gb|EER99631.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
Length = 802
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 196/635 (30%), Positives = 331/635 (52%), Gaps = 23/635 (3%)
Query: 45 IHSLIFKSGL---ESNTFIQNSLINLYAKCGLISQAKSMF--DSCSTLDPVACNIMISGY 99
+H+ + S L + + LI+LY G + A ++F D C PVA +++ Y
Sbjct: 43 LHARLLTSALLHAPPHPHLTLRLIHLYTLSGDLPAAATLFRADPC----PVAATSLVAAY 98
Query: 100 IRNDRLNDAREVFDKTPI--KCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVI-PNEV 156
RL A FD P + V + ++I +A+ A+ VFR + G + P++
Sbjct: 99 AAAGRLPAAVSFFDAVPQARRDTVLHNAVISAYARASHAAPAVAVFRSLLASGSLRPDDY 158
Query: 157 TLASVISSSVHLGGI--WECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSL---VEARS 211
+ +++S++ HL I C L V+K G + +S L+ +Y C +L +AR
Sbjct: 159 SFTALLSAAGHLPNISVRHCAQLQCSVLKSGAGGVLSVSNALVALYMKCEALEATRDARK 218
Query: 212 LFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEA 271
+ DEM +++ ++W M+ G+ + G V AR +FE + K V W MI GY+ + EA
Sbjct: 219 VLDEMPDKDALTWTTMVVGYVRRGDVGAARSVFEEVDVKFDVVWNAMISGYVHSGMVVEA 278
Query: 272 LTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD----FIQAT 327
++R M+ + + ++ ++SAC A F G +H I + + +
Sbjct: 279 FELFRRMVLERVPLDEFTFTSVLSACANAGFFAHGKSVHGQITRLQPNFVPEAALPVNNA 338
Query: 328 IIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSW 387
++ Y+ CG I +AR F+ + SWN +++G++ + ++ A ++F M ++ SW
Sbjct: 339 LVTLYSKCGNIAVARRIFDNMKSKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSW 398
Query: 388 SAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLN 447
M+SGY AL+LF+ M VKP + T A G+LK G+ H +++
Sbjct: 399 MVMVSGYVHGGFSEDALKLFNRMRAEDVKPCDYTYAGAISACGELGSLKHGKQLHGHLVQ 458
Query: 448 NSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTL 507
+++ A+I MYA+CG++ A + + + SVS WNA+I L HG L
Sbjct: 459 LGFEGSNSAGNALITMYARCGAVKEA-NLMFLVMPNIDSVS-WNAMISALGQHGHGREAL 516
Query: 508 KIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDL 567
+++ + I + I+F+ VL+ C H+GLVD G +YF+SMK + + P HY ++DL
Sbjct: 517 ELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFQYFESMKRDFGIIPGEDHYTRLIDL 576
Query: 568 LGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSR 627
LGRAG++ +A ++I++MP + IW +L+ R G++E+G AA L + P H +
Sbjct: 577 LGRAGRIGEARDLIKTMPFEPTPSIWEAILSGCRTSGDMELGAHAADQLFKMTPQHDGTY 636
Query: 628 VLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
+LLSN Y+ AGRW DA +RK MRD G+K+ PG S
Sbjct: 637 ILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCS 671
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 148/540 (27%), Positives = 253/540 (46%), Gaps = 45/540 (8%)
Query: 8 SVFNSQKAN--LQNSDYEL-ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSL 64
+VF S A+ L+ DY AL+SA + +I+V Q+ + KSG + N+L
Sbjct: 142 AVFRSLLASGSLRPDDYSFTALLSAAGHLP-NISVRHCAQLQCSVLKSGAGGVLSVSNAL 200
Query: 65 INLYAKCGLIS---QAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCV 121
+ LY KC + A+ + D D + M+ GY+R + AR VF++ +K V
Sbjct: 201 VALYMKCEALEATRDARKVLDEMPDKDALTWTTMVVGYVRRGDVGAARSVFEEVDVKFDV 260
Query: 122 SYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLV 181
+ +MI G+ + EA E+FR M + V +E T SV+S+ + G + +HG +
Sbjct: 261 VWNAMISGYVHSGMVVEAFELFRRMVLERVPLDEFTFTSVLSACANAGFFAHGKSVHGQI 320
Query: 182 IKL----MIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLV 237
+L + + + ++ L+ +Y C ++ AR +FD MK +++VSWN +L+G+ ++ +
Sbjct: 321 TRLQPNFVPEAALPVNNALVTLYSKCGNIAVARRIFDNMKSKDVVSWNTILSGYVESSCL 380
Query: 238 ELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISAC 297
+ A E+FE +P K+ +SW M+ GY+ +AL ++ M + + P D ISAC
Sbjct: 381 DKAVEVFEEMPYKNELSWMVMVSGYVHGGFSEDALKLFNRMRAEDVKPCDYTYAGAISAC 440
Query: 298 GRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWN 357
G + G Q+H +V+ GF+ + +I YA CG + A L F + SWN
Sbjct: 441 GELGSLKHGKQLHGHLVQLGFEGSNSAGNALITMYARCGAVKEANLMFLVMPNIDSVSWN 500
Query: 358 ALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKP 417
A+I+ ++G +A +LF+ MV G+ P
Sbjct: 501 AMISALGQHGHGREALELFDR-------------------------------MVAEGIYP 529
Query: 418 NEITMVSVFCAIASSGTLKEGRWAHEYVLNN-SITLNDNLSAAIIDMYAKCGSINTAFEV 476
+ I+ ++V A SG + EG E + + I ++ +ID+ + G I A ++
Sbjct: 530 DRISFLTVLTACNHSGLVDEGFQYFESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEARDL 589
Query: 477 FYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAG 536
+ T S W AI+ G GD L L K + + T+I + +T AG
Sbjct: 590 IKTMPFEPTP-SIWEAILSGCRTSGDMELGAHAADQLFKMTPQHDG-TYILLSNTYSAAG 647
>gi|449505835|ref|XP_004162581.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g02750-like [Cucumis sativus]
Length = 741
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 213/671 (31%), Positives = 345/671 (51%), Gaps = 65/671 (9%)
Query: 49 IFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDA 108
+F E N NS+I+ YAK G I+ A+ +FD + V+ N MI+GY+ N+ + DA
Sbjct: 37 VFLKMTERNIVTYNSMISAYAKNGRIANARELFDLMPQRNLVSWNSMIAGYLHNELVEDA 96
Query: 109 REVFDKTPIKCCVSYTSMIM--------------------------------GFAQNDCW 136
+FD+ + S+T MI G+A+ +
Sbjct: 97 ARLFDRMFKRDIYSWTLMITCYTRIGELEKARELFNLLPDKQDTVCRNALIAGYAKKRLF 156
Query: 137 REALEVFRDMRILGVIP-NEVTLASVISSSVHLGGIWECRMLHGLVI--KLMIDGFV--- 190
REA ++F +M + V+ N + + + LG + M V+ LM+DG+V
Sbjct: 157 REAKKLFDEMLVKNVVSWNSILSGYTKNGKMQLGLQFFEAMGERNVVSWNLMVDGYVGVG 216
Query: 191 -----------IISTNLLNMYCVCSS------LVEARSLFDEMKERNIVSWNVMLNGFAK 233
I + N+++ + S + EAR+LF+EM +N+VSWN M+ + +
Sbjct: 217 DLDSAWMFFKKIPTPNVVSWVTMLSGFAHYGRMTEARNLFNEMPTKNLVSWNAMIGAYVR 276
Query: 234 AGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDL 293
++ A +LF +P KD VSW MI+GY++V +L +A + M IA MI
Sbjct: 277 ENQIDDAYKLFMEMPEKDSVSWTAMINGYVRVGKLLQAREILNLMPYKNIAAQTAMINGY 336
Query: 294 ISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHI 353
+ + GR E +I S I C++ ++I YA CGR + A F+ + +
Sbjct: 337 LQS-GR---MDEANEIFSQISVRDSVCWN----SMITGYAHCGRTDEALRLFQEMVCKDM 388
Query: 354 ASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDA 413
SWN +IA + + G ++ A ++FN MQ+R+V SW+++I+GY QN AL F M
Sbjct: 389 VSWNTMIAAYAQAGQMDKALEMFNEMQERNVVSWNSLITGYVQNGLYFEALNCFILMKQQ 448
Query: 414 GVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTA 473
G KP++ T+V A A+ L G H + + + AI+ MYAK G + A
Sbjct: 449 GEKPDQTTIVCCLRASANLAALNVGVQLHHLTIKTGFGNDLFVKNAILTMYAKSGRVPEA 508
Query: 474 FEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCC 533
VF I+ + V WN++I G A++G ++++ + R I + +TF G+LS C
Sbjct: 509 ENVFAEIKXK--DVVSWNSLIAGYALNGCGKEAVELFEVMPLRGIIPDEVTFTGLLSACN 566
Query: 534 HAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIW 593
H G VD G FKSM Y+++P +HY C+++LLGR G+LE+A E+++ M + IW
Sbjct: 567 HGGFVDQGLNLFKSMTETYSIKPQSEHYACVINLLGRVGRLEEAVEIVQGMKTVSSAKIW 626
Query: 594 GTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDC 653
G LL A RIH N+E+ + +A+ L L+P + + VLLSN++A+AGRW+ +R M++
Sbjct: 627 GALLWACRIHHNLELAKYSAERLLALEPQNASNYVLLSNMHAEAGRWDMVERVRVLMKEN 686
Query: 654 GMKRLPGFSGV 664
++ PG S +
Sbjct: 687 KAEKQPGCSWI 697
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 149/553 (26%), Positives = 273/553 (49%), Gaps = 35/553 (6%)
Query: 56 SNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKT 115
S F QN I+ + G I +A ++F + + V N MIS Y +N R+ +ARE+FD
Sbjct: 13 SYVFTQNLRISQLGRSGRIEEAVAVFLKMTERNIVTYNSMISAYAKNGRIANARELFDLM 72
Query: 116 PIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECR 175
P + VS+ SMI G+ N+ +A +F M + + +I+ +G + + R
Sbjct: 73 PQRNLVSWNSMIAGYLHNELVEDAARLFDRMFKRDI----YSWTLMITCYTRIGELEKAR 128
Query: 176 MLHGLVIKLMIDGFVIISTN-LLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKA 234
L L+ D + N L+ Y EA+ LFDEM +N+VSWN +L+G+ K
Sbjct: 129 EL----FNLLPDKQDTVCRNALIAGYAKKRLFREAKKLFDEMLVKNVVSWNSILSGYTKN 184
Query: 235 GLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLI 294
G ++L + FE + ++VVSW M+DGY+ V L A ++ + PN V V ++
Sbjct: 185 GKMQLGLQFFEAMGERNVVSWNLMVDGYVGVGDLDSAWMFFKKI----PTPNVVSWVTML 240
Query: 295 SACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLA-RLQFELGIKDHI 353
S E + + + ++ +I Y +I+ A +L E+ KD +
Sbjct: 241 SGFAHYGRMTEARNLFNEMPTKNLVSWN----AMIGAYVRENQIDDAYKLFMEMPEKDSV 296
Query: 354 ASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDA 413
SW A+I G++R G + AR++ N M +++ + +AMI+GY Q+ + + A E+F +
Sbjct: 297 -SWTAMINGYVRVGKLLQAREILNLMPYKNIAAQTAMINGYLQSGRMDEANEIFSQI--- 352
Query: 414 GVKPNEITMVSVFCAIASSGTLKEG-RWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINT 472
V+ + + S+ A G E R E V + ++ N ++A YA+ G ++
Sbjct: 353 SVR-DSVCWNSMITGYAHCGRTDEALRLFQEMVCKDMVSWNTMIAA-----YAQAGQMDK 406
Query: 473 AFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTC 532
A E+F +++R +V WN++I G +G L + ++++ K + T + L
Sbjct: 407 ALEMFNEMQER--NVVSWNSLITGYVQNGLYFEALNCFILMKQQGEKPDQTTIVCCLRAS 464
Query: 533 CHAGLVDLG-ERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVV 591
+ +++G + + ++K+ + DL ++ + ++G++ +AE V + K DVV
Sbjct: 465 ANLAALNVGVQLHHLTIKTGFG--NDLFVKNAILTMYAKSGRVPEAENVFAEIKXK-DVV 521
Query: 592 IWGTLLAASRIHG 604
W +L+A ++G
Sbjct: 522 SWNSLIAGYALNG 534
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 136/510 (26%), Positives = 240/510 (47%), Gaps = 54/510 (10%)
Query: 48 LIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLND 107
+ FK N ++++ +A G +++A+++F+ T + V+ N MI Y+R ++++D
Sbjct: 223 MFFKKIPTPNVVSWVTMLSGFAHYGRMTEARNLFNEMPTKNLVSWNAMIGAYVRENQIDD 282
Query: 108 AREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIP--NEVTLASVISSS 165
A ++F + P K VS+T+MI G+ + +A E IL ++P N ++I+
Sbjct: 283 AYKLFMEMPEKDSVSWTAMINGYVRVGKLLQARE------ILNLMPYKNIAAQTAMINGY 336
Query: 166 VHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWN 225
+ G + E + ++ + V ++ ++ Y C EA LF EM +++VSWN
Sbjct: 337 LQSGRMDEANEIFS---QISVRDSVCWNS-MITGYAHCGRTDEALRLFQEMVCKDMVSWN 392
Query: 226 VMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAP 285
M+ +A+AG ++ A E+F + ++VVSW ++I GY+Q EAL + M G P
Sbjct: 393 TMIAAYAQAGQMDKALEMFNEMQERNVVSWNSLITGYVQNGLYFEALNCFILMKQQGEKP 452
Query: 286 NDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQF 345
+ IV + A A G+Q+H + +K GF F++ I+ YA GR+ A F
Sbjct: 453 DQTTIVCCLRASANLAALNVGVQLHHLTIKTGFGNDLFVKNAILTMYAKSGRVPEAENVF 512
Query: 346 -ELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMAL 404
E+ KD + SWN+LIAG+ NG ++A +LF M R
Sbjct: 513 AEIKXKD-VVSWNSLIAGYALNGCGKEAVELFEVMPLR---------------------- 549
Query: 405 ELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNN-SITLNDNLSAAIIDM 463
G+ P+E+T + A G + +G + + SI A +I++
Sbjct: 550 ---------GIIPDEVTFTGLLSACNHGGFVDQGLNLFKSMTETYSIKPQSEHYACVINL 600
Query: 464 YAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKL--- 520
+ G + A E+ ++ +S W A++ +H NL L YS +R + L
Sbjct: 601 LGRVGRLEEAVEIVQGMKT-VSSAKIWGALLWACRIH--HNLELAKYS--AERLLALEPQ 655
Query: 521 NSITFIGVLSTCCHAGLVDLGERYFKSMKS 550
N+ ++ + + AG D+ ER MK
Sbjct: 656 NASNYVLLSNMHAEAGRWDMVERVRVLMKE 685
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 95/356 (26%), Positives = 168/356 (47%), Gaps = 32/356 (8%)
Query: 294 ISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHI 353
IS GR+ E + + + + Y+ ++I YA GRI AR F+L + ++
Sbjct: 22 ISQLGRSGRIEEAVAVFLKMTERNIVTYN----SMISAYAKNGRIANARELFDLMPQRNL 77
Query: 354 ASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDA 413
SWN++IAG++ N ++EDA +LF+ M KRD+YSW+ MI+ Y + + A ELF+ + D
Sbjct: 78 VSWNSMIAGYLHNELVEDAARLFDRMFKRDIYSWTLMITCYTRIGELEKARELFNLLPD- 136
Query: 414 GVKPNEITMVSVFCAIASSGTLKEG-RWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINT 472
K + + ++ A +E + E ++ N ++ N LS Y K G +
Sbjct: 137 --KQDTVCRNALIAGYAKKRLFREAKKLFDEMLVKNVVSWNSILSG-----YTKNGKMQL 189
Query: 473 AFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTC 532
+ F + +R +V WN ++ G GD + + + N+ ++++ +LS
Sbjct: 190 GLQFFEAMGER--NVVSWNLMVDGYVGVGDLDSAWMFFKKIPTPNV----VSWVTMLSGF 243
Query: 533 CHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVI 592
H G + F M + +L + M+ R Q++DA ++ MP K D V
Sbjct: 244 AHYGRMTEARNLFNEMPT-----KNLVSWNAMIGAYVRENQIDDAYKLFMEMPEK-DSVS 297
Query: 593 WGTLLAASRIHGNVEVGE-RAAKSLAGLQPSHG-PSRVLLSNIYADAGRWEDAFSI 646
W + I+G V VG+ A+ + L P ++ + N Y +GR ++A I
Sbjct: 298 WTAM-----INGYVRVGKLLQAREILNLMPYKNIAAQTAMINGYLQSGRMDEANEI 348
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 73/147 (49%), Gaps = 31/147 (21%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
+ +V LR + A++ G Q+H L K+G ++ F++N+++ +YAK G + +A+++F
Sbjct: 454 QTTIVCCLRASANLAALNVGVQLHHLTIKTGFGNDLFVKNAILTMYAKSGRVPEAENVFA 513
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
D V+ N +I+GY A N C +EA+E+
Sbjct: 514 EIKXKDVVSWNSLIAGY-------------------------------ALNGCGKEAVEL 542
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLG 169
F M + G+IP+EVT ++S+ H G
Sbjct: 543 FEVMPLRGIIPDEVTFTGLLSACNHGG 569
>gi|347954544|gb|AEP33772.1| organelle transcript processing 82, partial [Draba nemorosa]
Length = 526
Score = 333 bits (853), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 188/522 (36%), Positives = 286/522 (54%), Gaps = 37/522 (7%)
Query: 103 DRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVI 162
D L A VF+ + + +M G A + AL ++ M LG++PN T ++
Sbjct: 36 DGLPYAISVFETIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLL 95
Query: 163 SSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIV 222
S E + +HG V+KL D + + T+L++MY L +AR +FD+ R++V
Sbjct: 96 KSCAKSKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVV 155
Query: 223 SWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDG 282
S+ ++ G+A G +E A++LF+ IP KDVVSW MI GY + EAL +++ M+
Sbjct: 156 SYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTN 215
Query: 283 IAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLAR 342
+ P++ +V ++SAC ++ + G Q+H I GF I +I Y+ CG + A
Sbjct: 216 VRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGEVETAC 275
Query: 343 LQFE-LGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPN 401
FE L KD + SWN LI G+ + ++
Sbjct: 276 GLFEGLSYKD-VISWNTLIGGYTHMNLYKE------------------------------ 304
Query: 402 MALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLN--NSITLNDNLSAA 459
AL LF M+ +G PN++TM+S+ A A G + GRW H Y+ +T +L +
Sbjct: 305 -ALLLFQEMLRSGESPNDVTMLSILPACAHLGAIDIGRWIHVYINKRLKGVTNASSLLTS 363
Query: 460 IIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIK 519
+IDMYAKCG I A +VF + R S+S WNA+I G AMHG AN ++S + K I
Sbjct: 364 LIDMYAKCGDIEAAKQVFDSMLTR--SLSSWNAMIFGFAMHGKANAAFDLFSKMRKNGID 421
Query: 520 LNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEE 579
+ ITF+G+LS C H+G++DLG F+SM Y + P L+HYGCM+DLLG G ++A+E
Sbjct: 422 PDDITFVGLLSACSHSGMLDLGRHIFRSMSQDYKITPKLEHYGCMIDLLGHCGLFKEAKE 481
Query: 580 VIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQP 621
+IR+MPM+ D VIW +LL A ++H NVE+GE A++L ++P
Sbjct: 482 MIRTMPMEPDGVIWCSLLKACKMHNNVELGESYAQNLIKIEP 523
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 132/483 (27%), Positives = 217/483 (44%), Gaps = 74/483 (15%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
L+ C+ A +GQQIH + K G + + ++ SLI++Y + G + A+ +FD S D
Sbjct: 95 LKSCAKSKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDV 154
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
V+ +I GY + +A+++FD+ P+K VS+ +MI G+A+ ++EALE+F+DM
Sbjct: 155 VSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKT 214
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
V P+E T+ +V+S+ G I R +H + + I L+++Y C + A
Sbjct: 215 NVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGEVETA 274
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLS 269
LF+ + ++++SWN ++ G+ L +
Sbjct: 275 CGLFEGLSYKDVISWNTLIGGYTHMNLYK------------------------------- 303
Query: 270 EALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVK--AGFDCYDFIQAT 327
EAL +++ ML G +PNDV ++ ++ AC A G IH I K G + +
Sbjct: 304 EALLLFQEMLRSGESPNDVTMLSILPACAHLGAIDIGRWIHVYINKRLKGVTNASSLLTS 363
Query: 328 IIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSW 387
+I YA CG I A+ F+ + ++SWNA+I GF +G
Sbjct: 364 LIDMYAKCGDIEAAKQVFDSMLTRSLSSWNAMIFGFAMHG-------------------- 403
Query: 388 SAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLN 447
+ N A +LF M G+ P++IT V + A + SG L GR +
Sbjct: 404 -----------KANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDLGRHIFRSMSQ 452
Query: 448 N-SITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGL----AMHGD 502
+ IT +ID+ CG A E+ RT + P I C L MH +
Sbjct: 453 DYKITPKLEHYGCMIDLLGHCGLFKEAKEMI-----RTMPMEPDGVIWCSLLKACKMHNN 507
Query: 503 ANL 505
L
Sbjct: 508 VEL 510
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 127/289 (43%), Gaps = 64/289 (22%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E +V+ + C+ ++ G+Q+H I G SN I N+LI+LY+KCG + A +F+
Sbjct: 220 ESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGEVETACGLFE 279
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
S D ++ N +I GY + ++EAL +
Sbjct: 280 GLSYKDVISWNTLIGGY-------------------------------THMNLYKEALLL 308
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLM--IDGFVIISTNLLNMY 200
F++M G PN+VT+ S++ + HLG I R +H + K + + + T+L++MY
Sbjct: 309 FQEMLRSGESPNDVTMLSILPACAHLGAIDIGRWIHVYINKRLKGVTNASSLLTSLIDMY 368
Query: 201 CVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMID 260
C + A+ +FD M R++ SWN M+ GFA G A +LF +
Sbjct: 369 AKCGDIEAAKQVFDSMLTRSLSSWNAMIFGFAMHGKANAAFDLFSK-------------- 414
Query: 261 GYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQI 309
M +GI P+D+ V L+SAC + G I
Sbjct: 415 -----------------MRKNGIDPDDITFVGLLSACSHSGMLDLGRHI 446
>gi|414887370|tpg|DAA63384.1| TPA: hypothetical protein ZEAMMB73_689576 [Zea mays]
Length = 802
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 197/634 (31%), Positives = 330/634 (52%), Gaps = 21/634 (3%)
Query: 45 IHSLIFKSGL---ESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIR 101
+H+ + S L + + LI+LY + A ++F C+ PV+ +++ Y
Sbjct: 43 LHARLLTSALLHAPPHPHLTLRLIHLYTLSRDLPAAATLF--CADPCPVSATSLVAAYAA 100
Query: 102 NDRLNDAREVFDKTPI--KCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVI-PNEVTL 158
DRL A FD P + V + ++I +A+ A+ VFR + G + P++ +
Sbjct: 101 ADRLPAAVSFFDAVPPARRDTVLHNAVISAYARASHAAPAVAVFRSLLASGSLRPDDYSF 160
Query: 159 ASVISSSVHLGGI--WECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSS---LVEARSLF 213
+++S+ HL I C LH V+K G + + L+ +Y C S +AR +
Sbjct: 161 TALLSAGGHLPNISVRHCAQLHCSVLKSGAGGALSVCNALVALYMKCESPEATRDARKVL 220
Query: 214 DEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALT 273
DEM ++ ++W M+ G+ + G V AR +FE + K V W MI GY+ EA
Sbjct: 221 DEMPNKDDLTWTTMVVGYVRRGDVGAARSVFEEVDGKFDVVWNAMISGYVHSGMAVEAFE 280
Query: 274 MYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD----FIQATII 329
++R M+ + + ++ ++SAC F G +H I++ + + ++
Sbjct: 281 LFRRMVLERVPLDEFTFTSVLSACANVGLFAHGKSVHGQIIRLQPNFVPEAALPVNNALV 340
Query: 330 HFYAACGRINLARLQFE-LGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWS 388
FY+ CG I +AR F+ + +KD + SWN +++G++ + ++ A ++F M ++ SW
Sbjct: 341 TFYSKCGNIAVARRIFDNMTLKD-VVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWM 399
Query: 389 AMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNN 448
M+SGY AL+LF+ M VKP + T A G LK G+ H +++
Sbjct: 400 VMVSGYVHGGFAEDALKLFNKMRSENVKPCDYTYAGAIAACGELGALKHGKQLHGHIVQL 459
Query: 449 SITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLK 508
+++ A+I MYA+CG++ A +F + SVS WNA+I L HG L+
Sbjct: 460 GFEGSNSAGNALITMYARCGAVKEAHLMFL-VMPNIDSVS-WNAMISALGQHGHGREALE 517
Query: 509 IYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLL 568
++ + I + I+F+ VL+ C H+GLVD G RYF+SMK + + P HY ++DLL
Sbjct: 518 LFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFRYFESMKRDFGIIPGEDHYTRLIDLL 577
Query: 569 GRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRV 628
GRAG++ +A ++I++MP + IW +L+ R G++E+G AA L + P H + +
Sbjct: 578 GRAGRIGEARDLIKTMPFEPTPSIWEAILSGCRTSGDMELGAHAADQLFKMTPQHDGTYI 637
Query: 629 LLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
LLSN Y+ AG W DA +RK MRD G+K+ PG S
Sbjct: 638 LLSNTYSAAGCWVDAARVRKLMRDRGVKKEPGCS 671
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 149/540 (27%), Positives = 251/540 (46%), Gaps = 45/540 (8%)
Query: 8 SVFNS--QKANLQNSDYEL-ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSL 64
+VF S +L+ DY AL+SA + +I+V Q+H + KSG + N+L
Sbjct: 142 AVFRSLLASGSLRPDDYSFTALLSAGGHLP-NISVRHCAQLHCSVLKSGAGGALSVCNAL 200
Query: 65 INLYAKC---GLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCV 121
+ LY KC A+ + D D + M+ GY+R + AR VF++ K V
Sbjct: 201 VALYMKCESPEATRDARKVLDEMPNKDDLTWTTMVVGYVRRGDVGAARSVFEEVDGKFDV 260
Query: 122 SYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLV 181
+ +MI G+ + EA E+FR M + V +E T SV+S+ ++G + +HG +
Sbjct: 261 VWNAMISGYVHSGMAVEAFELFRRMVLERVPLDEFTFTSVLSACANVGLFAHGKSVHGQI 320
Query: 182 IKL----MIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLV 237
I+L + + + ++ L+ Y C ++ AR +FD M +++VSWN +L+G+ ++ +
Sbjct: 321 IRLQPNFVPEAALPVNNALVTFYSKCGNIAVARRIFDNMTLKDVVSWNTILSGYVESSCL 380
Query: 238 ELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISAC 297
+ A E+FE +P K+ +SW M+ GY+ +AL ++ M + + P D I+AC
Sbjct: 381 DKAVEVFEEMPYKNELSWMVMVSGYVHGGFAEDALKLFNKMRSENVKPCDYTYAGAIAAC 440
Query: 298 GRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWN 357
G A G Q+H IV+ GF+ + +I YA CG + A L F + SWN
Sbjct: 441 GELGALKHGKQLHGHIVQLGFEGSNSAGNALITMYARCGAVKEAHLMFLVMPNIDSVSWN 500
Query: 358 ALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKP 417
A+I+ ++G +A +LF+ MV G+ P
Sbjct: 501 AMISALGQHGHGREALELFDR-------------------------------MVAEGIYP 529
Query: 418 NEITMVSVFCAIASSGTLKEG-RWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEV 476
+ I+ ++V A SG + EG R+ + I ++ +ID+ + G I A ++
Sbjct: 530 DRISFLTVLTACNHSGLVDEGFRYFESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEARDL 589
Query: 477 FYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAG 536
+ T S W AI+ G GD L L K + + T+I + +T AG
Sbjct: 590 IKTMPFEPTP-SIWEAILSGCRTSGDMELGAHAADQLFKMTPQHDG-TYILLSNTYSAAG 647
>gi|242076924|ref|XP_002448398.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
gi|241939581|gb|EES12726.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
Length = 865
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 202/658 (30%), Positives = 338/658 (51%), Gaps = 42/658 (6%)
Query: 10 FNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYA 69
F S + +S A++ C A S Q+ ++ K G + ++ + +L++++
Sbjct: 125 FVSMHRSGDSSPNAFTFAYAMKSCGALGERSLALQLLGMVQKFGSQDDSDVAAALVDMFV 184
Query: 70 KCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMG 129
+CG + A +F N M+ GY++ ++ A E+FD P + VS+ M+
Sbjct: 185 RCGTVDLASRLFVRIKEPTIFCRNSMLVGYVKTYGVDHALELFDSMPERDVVSWNMMVSA 244
Query: 130 FAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGF 189
+Q+ REAL++ DM+ GV + T S +++ L + + LH VI+
Sbjct: 245 LSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIR------ 298
Query: 190 VIISTNLLNMYC----VCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFE 245
N+ C V S+LVE +AK G + A+ +F
Sbjct: 299 --------NLPCIDPYVASALVEL---------------------YAKCGCFKEAKGVFN 329
Query: 246 RIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGE 305
+ ++ V+W +I G+LQ +E++ ++ M + + + + LIS C M
Sbjct: 330 SLHDRNNVAWTVLIAGFLQHGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCL 389
Query: 306 GLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIR 365
G Q+HS+ +K+G + ++I YA C + A F + I SW ++I +
Sbjct: 390 GRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAESIFRFMNEKDIVSWTSMITAHSQ 449
Query: 366 NGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMV-DAGVKPNEITMVS 424
G I AR+ F+ M ++V +W+AM+ Y Q+ L +++ M+ + V+P+ +T V+
Sbjct: 450 VGNIAKAREFFDGMSTKNVITWNAMLGAYIQHGAEEDGLRMYNVMLSEKDVRPDWVTYVT 509
Query: 425 VFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRT 484
+F A G K G + + L+ +++ A+I MY+KCG I A +VF +
Sbjct: 510 LFKGCADLGANKLGDQIIGRTVKVGLILDTSVANAVITMYSKCGRILEARKVFDFLN--V 567
Query: 485 TSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERY 544
+ WNA+I G + HG ++I+ D+ KR K + I+++ VLS C H+GLV G+ Y
Sbjct: 568 KDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKSY 627
Query: 545 FKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHG 604
F MK V+N+ P L+H+ CMVDLLGRAG L +A+++I MPMK +WG LL+A +IHG
Sbjct: 628 FDMMKRVHNISPGLEHFSCMVDLLGRAGHLTEAKDLIDEMPMKPTAEVWGALLSACKIHG 687
Query: 605 NVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
N E+ E AAK + L S +L++ IYADAG+ +D+ IRK MRD G+K+ PG+S
Sbjct: 688 NNELAELAAKHVFELDSPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGIKKNPGYS 745
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 152/589 (25%), Positives = 280/589 (47%), Gaps = 19/589 (3%)
Query: 25 ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKS-MFDS 83
A ALR C A A++ + +H + GL S F+QN+L++ Y CG + A+ +
Sbjct: 6 AFADALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALPDARRLLLTD 65
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
+ + + N+M++GY++ RL+DA E+F + P + S+ +++ G+ Q+ + +LE F
Sbjct: 66 IAHPNVITHNVMLNGYVKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSQQYLASLESF 125
Query: 144 RDMRILG-VIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
M G PN T A + S LG L G+V K ++ L++M+
Sbjct: 126 VSMHRSGDSSPNAFTFAYAMKSCGALGERSLALQLLGMVQKFGSQDDSDVAAALVDMFVR 185
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
C ++ A LF +KE I N ML G+ K V+ A ELF+ +P +DVVSW M+
Sbjct: 186 CGTVDLASRLFVRIKEPTIFCRNSMLVGYVKTYGVDHALELFDSMPERDVVSWNMMVSAL 245
Query: 263 LQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD 322
Q R+ EAL M M G+ + ++AC R + G Q+H+ +++ C D
Sbjct: 246 SQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIR-NLPCID 304
Query: 323 -FIQATIIHFYAACGRINLARLQF-ELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ 380
++ + ++ YA CG A+ F L ++++A W LIAGF+++G ++ +LFN M+
Sbjct: 305 PYVASALVELYAKCGCFKEAKGVFNSLHDRNNVA-WTVLIAGFLQHGCFTESVELFNQMR 363
Query: 381 KR----DVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLK 436
D ++ + +ISG + +L + +G + S+ A L+
Sbjct: 364 AELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQ 423
Query: 437 EGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICG 496
++ I ++I +++ G+I A E F + T +V WNA++
Sbjct: 424 SAESIFRFMNEKDIV----SWTSMITAHSQVGNIAKAREFFDGM--STKNVITWNAMLGA 477
Query: 497 LAMHGDANLTLKIYSD-LEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVE 555
HG L++Y+ L +++++ + +T++ + C G LG++ V +
Sbjct: 478 YIQHGAEEDGLRMYNVMLSEKDVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKV-GLI 536
Query: 556 PDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHG 604
D ++ + + G++ +A +V + +K D+V W ++ HG
Sbjct: 537 LDTSVANAVITMYSKCGRILEARKVFDFLNVK-DIVSWNAMITGYSQHG 584
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 117/434 (26%), Positives = 218/434 (50%), Gaps = 12/434 (2%)
Query: 178 HGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLF-DEMKERNIVSWNVMLNGFAKAGL 236
HG ++ + + V + LL+ Y C +L +AR L ++ N+++ NVMLNG+ K G
Sbjct: 27 HGRLVAVGLASAVFLQNTLLHAYLSCGALPDARRLLLTDIAHPNVITHNVMLNGYVKLGR 86
Query: 237 VELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDG-IAPNDVMIVDLIS 295
+ A ELF R+P++DV SW T++ GY Q ++ +L + +M G +PN +
Sbjct: 87 LSDAVELFGRMPARDVASWNTLMSGYFQSQQYLASLESFVSMHRSGDSSPNAFTFAYAMK 146
Query: 296 ACGRAMAFGE---GLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDH 352
+CG A GE LQ+ ++ K G + A ++ + CG ++LA F +
Sbjct: 147 SCG---ALGERSLALQLLGMVQKFGSQDDSDVAAALVDMFVRCGTVDLASRLFVRIKEPT 203
Query: 353 IASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVD 412
I N+++ G+++ ++ A +LF++M +RDV SW+ M+S +Q+ + AL++ M
Sbjct: 204 IFCRNSMLVGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQS 263
Query: 413 AGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINT 472
GV+ + T S A A +L+ G+ H V+ N ++ +++A++++YAKCG
Sbjct: 264 KGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPCIDPYVASALVELYAKCGCFKE 323
Query: 473 AFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTC 532
A VF + DR W +I G HG ++++++ + + L+ ++S C
Sbjct: 324 AKGVFNSLHDRNNVA--WTVLIAGFLQHGCFTESVELFNQMRAELMTLDQFALATLISGC 381
Query: 533 CHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVI 592
C + LG + ++ + ++ + + L+ AE + R M K D+V
Sbjct: 382 CSRMDLCLGRQLHSLCLKSGQIQAVVVS-NSLISMYAKCDNLQSAESIFRFMNEK-DIVS 439
Query: 593 WGTLLAASRIHGNV 606
W +++ A GN+
Sbjct: 440 WTSMITAHSQVGNI 453
>gi|226529055|ref|NP_001142025.1| uncharacterized protein LOC100274179 [Zea mays]
gi|194706828|gb|ACF87498.1| unknown [Zea mays]
Length = 570
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 185/544 (34%), Positives = 293/544 (53%), Gaps = 34/544 (6%)
Query: 121 VSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGL 180
V Y ++ + +DC REAL + R M GV+PNE TL V+ + +HG+
Sbjct: 11 VMYNTITRAYCNSDCPREALRLHRCMLRRGVLPNEFTLPFVVKACTRAQAWDNALAVHGV 70
Query: 181 VIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELA 240
+KL G V ++ N +L+ +A AG + +
Sbjct: 71 ALKLGFVGQVFVA-------------------------------NALLHSYASAGSLGDS 99
Query: 241 RELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRA 300
R F+ + ++VVSW +MI GY Q EA ++ M G ++ + L+ AC +
Sbjct: 100 RRFFDEMAGRNVVSWNSMIGGYAQAGDTREACALFGEMRRQGFLGDEFTLASLLLACSQE 159
Query: 301 MAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALI 360
G +H +++ +G + ++ Y+ CG + +AR FE+ + SW +++
Sbjct: 160 GNLEFGRLVHCLMLVSGSPVDLILGGALVDMYSKCGDLCMARRCFEMMPIKSVVSWTSML 219
Query: 361 AGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEI 420
++G ++ AR F++M +R+ SW+ MIS Y Q Q + AL+L+ M G P+E
Sbjct: 220 CAQTKHGSVDAARCWFDHMPERNTVSWNTMISCYVQRGQYHEALDLYKQMQSHGPAPDEA 279
Query: 421 TMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHI 480
T+V V A G L G+ H Y+ +N + +L +++DMYAKCG ++TA +F +
Sbjct: 280 TLVPVLSACGRIGDLTVGKMVHLYIRDNIHNPDISLINSLLDMYAKCGQVDTAIRLFREM 339
Query: 481 RDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDL 540
+R +V WN II GLAMHG A + + + RN + ITF+ +LS+C H GL++
Sbjct: 340 CNR--NVVSWNVIIGGLAMHGRALDAITFFRSM-VRNTSPDGITFVALLSSCSHGGLLET 396
Query: 541 GERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAAS 600
G+ YF+SM+ VYNV+ +++HY CMVDLLGR G LE A +I+ MPMK DVV+WG LL A
Sbjct: 397 GQHYFESMRHVYNVKHEVEHYACMVDLLGRRGHLEKAVCLIKEMPMKPDVVVWGALLGAC 456
Query: 601 RIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPG 660
RIHGNV++G++ K L L+ G VL+SN+ + +WED +RK M++ G ++ G
Sbjct: 457 RIHGNVKIGKQVIKQLLELEGISGGLFVLISNLLYETNQWEDMKRLRKLMKERGTRKDMG 516
Query: 661 FSGV 664
S +
Sbjct: 517 VSSI 520
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 123/492 (25%), Positives = 212/492 (43%), Gaps = 65/492 (13%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E L ++ C+ A +H + K G F+ N+L++ YA G
Sbjct: 45 EFTLPFVVKACTRAQAWDNALAVHGVALKLGFVGQVFVANALLHSYASAG---------- 94
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
L D+R FD+ + VS+ SMI G+AQ REA +
Sbjct: 95 ---------------------SLGDSRRFFDEMAGRNVVSWNSMIGGYAQAGDTREACAL 133
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
F +MR G + +E TLAS++ + G + R++H L++ +I+ L++MY
Sbjct: 134 FGEMRRQGFLGDEFTLASLLLACSQEGNLEFGRLVHCLMLVSGSPVDLILGGALVDMYSK 193
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
C L AR F+ M +++VSW ML K G V+ AR F+ +P ++ VSW TMI Y
Sbjct: 194 CGDLCMARRCFEMMPIKSVVSWTSMLCAQTKHGSVDAARCWFDHMPERNTVSWNTMISCY 253
Query: 263 LQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD 322
+Q + EAL +Y+ M G AP++ +V ++SACGR G +H I +
Sbjct: 254 VQRGQYHEALDLYKQMQSHGPAPDEATLVPVLSACGRIGDLTVGKMVHLYIRDNIHNPDI 313
Query: 323 FIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKR 382
+ +++ YA CG+++ A F ++ SWN +I G +G DA F +M +
Sbjct: 314 SLINSLLDMYAKCGQVDTAIRLFREMCNRNVVSWNVIIGGLAMHGRALDAITFFRSMVR- 372
Query: 383 DVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAH 442
P+ IT V++ + + G L+ G+
Sbjct: 373 -------------------------------NTSPDGITFVALLSSCSHGGLLETGQHYF 401
Query: 443 EYVLN-NSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHG 501
E + + ++ A ++D+ + G + A + + + V W A++ +HG
Sbjct: 402 ESMRHVYNVKHEVEHYACMVDLLGRRGHLEKAVCLIKEMPMK-PDVVVWGALLGACRIHG 460
Query: 502 DANLTLKIYSDL 513
+ + ++ L
Sbjct: 461 NVKIGKQVIKQL 472
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 95/394 (24%), Positives = 172/394 (43%), Gaps = 68/394 (17%)
Query: 243 LFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMA 302
+F+ I D V + T+ Y + EAL ++R ML G+ PN+ + ++ AC RA A
Sbjct: 1 MFDGILDPDRVMYNTITRAYCNSDCPREALRLHRCMLRRGVLPNEFTLPFVVKACTRAQA 60
Query: 303 FGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAG 362
+ L +H + +K GF F+ ++H YA+ G + +R F+ ++ SWN++I G
Sbjct: 61 WDNALAVHGVALKLGFVGQVFVANALLHSYASAGSLGDSRRFFDEMAGRNVVSWNSMIGG 120
Query: 363 FIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITM 422
+ + G +A LF M+++ G +E T+
Sbjct: 121 YAQAGDTREACALFGEMRRQ-------------------------------GFLGDEFTL 149
Query: 423 VSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTA---FEV--- 476
S+ A + G L+ GR H +L + ++ L A++DMY+KCG + A FE+
Sbjct: 150 ASLLLACSQEGNLEFGRLVHCLMLVSGSPVDLILGGALVDMYSKCGDLCMARRCFEMMPI 209
Query: 477 -------------------------FYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYS 511
F H+ +R T WN +I G + L +Y
Sbjct: 210 KSVVSWTSMLCAQTKHGSVDAARCWFDHMPERNT--VSWNTMISCYVQRGQYHEALDLYK 267
Query: 512 DLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMK-SVYNVEPDLKHYGCMVDLLGR 570
++ + T + VLS C G + +G+ ++ +++N PD+ ++D+ +
Sbjct: 268 QMQSHGPAPDEATLVPVLSACGRIGDLTVGKMVHLYIRDNIHN--PDISLINSLLDMYAK 325
Query: 571 AGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHG 604
GQ++ A + R M + +VV W ++ +HG
Sbjct: 326 CGQVDTAIRLFREMCNR-NVVSWNVIIGGLAMHG 358
>gi|147805537|emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]
Length = 906
Score = 332 bits (851), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 199/683 (29%), Positives = 331/683 (48%), Gaps = 107/683 (15%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E S L+ CS + G+Q+H ++ SG E + F+ N+L+ +YAKC +K +FD
Sbjct: 157 EFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFD 216
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+ V+ N + S Y+ Q D EA+ +
Sbjct: 217 EIPERNVVSWNALFSCYV-------------------------------QXDFCGEAVGL 245
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
F +M + G+ PNE +L+S++++ L +++HG +IKL D + L++MY
Sbjct: 246 FYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAK 305
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNG-------------------------------- 230
L +A S+F+++K+ +IVSWN ++ G
Sbjct: 306 VGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRQLHSSLMKMDMES 365
Query: 231 -----------FAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAML 279
++K L+E AR F +P KD+++W +I GY Q EAL+++ M
Sbjct: 366 DLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMH 425
Query: 280 CDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRIN 339
+GI N + ++ + Q+H + VK+GF ++ ++I Y C +
Sbjct: 426 KEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVE 485
Query: 340 LARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQ 399
A FE + S+ ++I + + G E+A +LF MQ
Sbjct: 486 DAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQ------------------- 526
Query: 400 PNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAA 459
D +KP+ S+ A A+ ++G+ H ++L L+ +
Sbjct: 527 ------------DMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNS 574
Query: 460 IIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIK 519
+++MYAKCGSI+ A F + +R + W+A+I GLA HG L++++ + K +
Sbjct: 575 LVNMYAKCGSIDDAGRAFSELTER--GIVSWSAMIGGLAQHGHGRQALQLFNQMLKEGVS 632
Query: 520 LNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEE 579
N IT + VL C HAGLV + YF+SM+ ++ +P +HY CM+DLLGRAG++ +A E
Sbjct: 633 PNHITLVSVLGACNHAGLVTEAKLYFESMEELFGFKPMQEHYACMIDLLGRAGKINEAVE 692
Query: 580 VIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGR 639
++ MP +A+ +WG LL A+RIH +VE+G RAA+ L L+P + VLL+NIYA AG+
Sbjct: 693 LVNKMPFEANASVWGALLGAARIHKDVELGRRAAEMLFILEPEKSGTHVLLANIYASAGK 752
Query: 640 WEDAFSIRKEMRDCGMKRLPGFS 662
WE+ +R+ MRD +K+ PG S
Sbjct: 753 WENVAEVRRLMRDSKVKKEPGMS 775
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 152/642 (23%), Positives = 269/642 (41%), Gaps = 117/642 (18%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
L C ++ G QIH+ I KSGL + I+N LINLY+KC A+ + D S D
Sbjct: 63 LSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRXFGYARKLVDESSEPD- 121
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
VS++++I G+AQN AL F +M +L
Sbjct: 122 ------------------------------LVSWSALISGYAQNGLGGGALMAFHEMHLL 151
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
GV NE T +SV+ + + + + +HG+V+ +G V ++ L+ MY C +++
Sbjct: 152 GVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDS 211
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLS 269
+ LFDE IP ++VVSW + Y+Q +
Sbjct: 212 KRLFDE-------------------------------IPERNVVSWNALFSCYVQXDFCG 240
Query: 270 EALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATII 329
EA+ ++ M+ GI PN+ + +++AC G IH ++K G+D F ++
Sbjct: 241 EAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALV 300
Query: 330 HFYAACGRINLARLQFELGIKDHIASWNALIAG--------------------------- 362
YA G + A FE + I SWNA+IAG
Sbjct: 301 DMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRQLHSSLMK 360
Query: 363 -------FIRNGMI---------EDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALEL 406
F+ G++ EDAR FN + ++D+ +W+A+ISGY+Q + AL L
Sbjct: 361 MDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSL 420
Query: 407 FHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAK 466
F M G+ N+ T+ ++ + A + R H + + + + ++ID Y K
Sbjct: 421 FVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGK 480
Query: 467 CGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFI 526
C + A +F + + ++I A +G LK++ +++ +K +
Sbjct: 481 CSHVEDAERIFEEC--TIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCS 538
Query: 527 GVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPM 586
+L+ C + + G++ + Y D+ +V++ + G ++DA +
Sbjct: 539 SLLNACANLSAFEQGKQLHVHILK-YGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTE 597
Query: 587 KADVVIWGTLLAASRIHGNVEVGERAAKSL-----AGLQPSH 623
+ +V W ++ HG+ G +A + G+ P+H
Sbjct: 598 RG-IVSWSAMIGGLAQHGH---GRQALQLFNQMLKEGVSPNH 635
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 98/447 (21%), Positives = 176/447 (39%), Gaps = 93/447 (20%)
Query: 153 PNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSL 212
P V+ + ++S + +H + K + I +L+N+Y C AR L
Sbjct: 54 PTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRXFGYARKL 113
Query: 213 FDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEAL 272
DE E ++VSW+ +++G+A+ GL AL
Sbjct: 114 VDESSEPDLVSWSALISGYAQNGLG-------------------------------GGAL 142
Query: 273 TMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFY 332
+ M G+ N+ ++ AC G Q+H ++V +GF+ F+ T++ Y
Sbjct: 143 MAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMY 202
Query: 333 AACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMIS 392
A C ++ F+ + ++ SWNAL S
Sbjct: 203 AKCDEFLDSKRLFDEIPERNVVSWNAL-------------------------------FS 231
Query: 393 GYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITL 452
Y Q + A+ LF+ MV +G+KPNE ++ S+ A G+ H Y++
Sbjct: 232 CYVQXDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDW 291
Query: 453 NDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSD 512
+ + A++DMYAK G + A VF I+ + WNA+I G +H L++
Sbjct: 292 DPFSANALVDMYAKVGDLADAISVFEKIKQ--PDIVSWNAVIAGCVLHEHHEQALELLGQ 349
Query: 513 LEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAG 572
++++ H+ L+ + ++E DL +VD+ +
Sbjct: 350 MKRQ----------------LHSSLMKM------------DMESDLFVSVGLVDMYSKCD 381
Query: 573 QLEDAEEVIRSMPMKADVVIWGTLLAA 599
LEDA +P K D++ W +++
Sbjct: 382 LLEDARMAFNLLPEK-DLIAWNAIISG 407
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 132/336 (39%), Gaps = 57/336 (16%)
Query: 283 IAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLAR 342
P V L+S C + GLQIH+ I K+G I+ +I+ Y+ C AR
Sbjct: 52 FTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRXFGYAR 111
Query: 343 LQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNM 402
+ + + SW+ALI+G YAQN
Sbjct: 112 KLVDESSEPDLVSWSALISG-------------------------------YAQNGLGGG 140
Query: 403 ALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIID 462
AL FH M GVK NE T SV A + L+ G+ H V+ + + ++ ++
Sbjct: 141 ALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVV 200
Query: 463 MYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNS 522
MYAKC + +F I +R +V WNA+ + ++ ++ IK N
Sbjct: 201 MYAKCDEFLDSKRLFDEIPER--NVVSWNALFSCYVQXDFCGEAVGLFYEMVLSGIKPNE 258
Query: 523 ITFIGVLSTCC-----------HAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRA 571
+ +++ C H L+ LG Y+ +P +VD+ +
Sbjct: 259 FSLSSMVNACTGLRDSSRGKIIHGYLIKLG----------YDWDP--FSANALVDMYAKV 306
Query: 572 GQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVE 607
G L DA V + + D+V W ++A +H + E
Sbjct: 307 GDLADAISVFEKIK-QPDIVSWNAVIAGCVLHEHHE 341
>gi|224073070|ref|XP_002303960.1| predicted protein [Populus trichocarpa]
gi|222841392|gb|EEE78939.1| predicted protein [Populus trichocarpa]
Length = 704
Score = 332 bits (851), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 195/633 (30%), Positives = 313/633 (49%), Gaps = 95/633 (15%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
L+ C + + +G++IH + SG N F ++N+YAKC
Sbjct: 37 LKLCGDNSDLKRGKEIHGSVITSGFSWNLFAMTGVVNMYAKC------------------ 78
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
++NDA +FD+ P + V + +MI G+AQN + AL + M
Sbjct: 79 -------------RQINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALMLVLRMSEE 125
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
G P+ +T+ S++ + + +HG V++ + V +ST L++MY C S
Sbjct: 126 GHRPDSITIVSILPAVADTRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKCGS---- 181
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLS 269
V +AR +F+ + + VVSW +MIDGY+Q
Sbjct: 182 ---------------------------VSIARVIFDGMDHRTVVSWNSMIDGYVQSGDAE 214
Query: 270 EALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATII 329
A+ +++ ML +G+ P +V ++ + AC G +H ++ + D + ++I
Sbjct: 215 GAMLIFQKMLDEGVQPTNVTVMGALHACADLGDLERGKFVHKLVDQLKLDSDVSVMNSLI 274
Query: 330 HFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSA 389
Y+ C R+++A +F N++ + + SW+A
Sbjct: 275 SMYSKCKRVDIAA-------------------------------DIFKNLRNKTLVSWNA 303
Query: 390 MISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNS 449
MI GYAQN N AL F M +KP+ TMVSV A+A ++ +W H V+
Sbjct: 304 MILGYAQNGCVNEALNAFCEMQSRNIKPDSFTMVSVIPALAELSIPRQAKWIHGLVIRRF 363
Query: 450 ITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKI 509
+ N + A++DMYAKCG+I+TA ++F + R V WNA+I G HG ++++
Sbjct: 364 LDKNVFVMTALVDMYAKCGAIHTARKLFDMMNAR--HVITWNAMIDGYGTHGLGKTSVEL 421
Query: 510 YSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLG 569
+ +++K IK N ITF+ LS C H+GLV+ G +F+SMK Y +EP + HYG MVDLLG
Sbjct: 422 FKEMKKGTIKPNDITFLCALSACSHSGLVEEGLCFFESMKKDYGIEPTMDHYGAMVDLLG 481
Query: 570 RAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVL 629
RAG+L A + I+ MP+K + ++G +L A +IH NV++GE+AA + L P G VL
Sbjct: 482 RAGRLNQAWDFIQKMPIKPGITVYGAMLGACKIHKNVDLGEKAAFEIFKLNPDDGGYHVL 541
Query: 630 LSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
L+NIYA A W +R M G+++ PG S
Sbjct: 542 LANIYATASMWGKVAKVRTIMEKSGLQKTPGCS 574
Score = 126 bits (316), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 85/340 (25%), Positives = 154/340 (45%), Gaps = 35/340 (10%)
Query: 258 MIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAG 317
M+ GY + L AL+ + M D + P L+ CG G +IH ++ +G
Sbjct: 1 MLKGYAKSSSLDSALSFFSRMKHDSVRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITSG 60
Query: 318 FDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFN 377
F F +++ YA C +IN A F+ + + WN +I+G
Sbjct: 61 FSWNLFAMTGVVNMYAKCRQINDAYNMFDRMPERDLVCWNTMISG--------------- 105
Query: 378 NMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKE 437
YAQN +AL L M + G +P+ IT+VS+ A+A + L+
Sbjct: 106 ----------------YAQNGFAKVALMLVLRMSEEGHRPDSITIVSILPAVADTRLLRI 149
Query: 438 GRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGL 497
G H YVL N+S A++DMY+KCGS++ A +F + RT V WN++I G
Sbjct: 150 GMAVHGYVLRAGFESLVNVSTALVDMYSKCGSVSIARVIFDGMDHRT--VVSWNSMIDGY 207
Query: 498 AMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPD 557
GDA + I+ + ++ ++T +G L C G ++ G ++ + ++ D
Sbjct: 208 VQSGDAEGAMLIFQKMLDEGVQPTNVTVMGALHACADLGDLERG-KFVHKLVDQLKLDSD 266
Query: 558 LKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLL 597
+ ++ + + +++ A ++ +++ K +V W ++
Sbjct: 267 VSVMNSLISMYSKCKRVDIAADIFKNLRNKT-LVSWNAMI 305
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 92/346 (26%), Positives = 154/346 (44%), Gaps = 76/346 (21%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+ ++ AL C+ + +G+ +H L+ + L+S+ + NSLI++Y+KC + A +F +
Sbjct: 233 VTVMGALHACADLGDLERGKFVHKLVDQLKLDSDVSVMNSLISMYSKCKRVDIAADIFKN 292
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
V+ N MI GY AQN C EAL F
Sbjct: 293 LRNKTLVSWNAMILGY-------------------------------AQNGCVNEALNAF 321
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
+M+ + P+ T+ SVI + L + + +HGLVI+ +D V + T L++MY C
Sbjct: 322 CEMQSRNIKPDSFTMVSVIPALAELSIPRQAKWIHGLVIRRFLDKNVFVMTALVDMYAKC 381
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYL 263
++ AR LFD M R++++WN M++G+ GL + + ELF+ + GT
Sbjct: 382 GAIHTARKLFDMMNARHVITWNAMIDGYGTHGLGKTSVELFKEMKK------GT------ 429
Query: 264 QVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDF 323
I PND+ + +SAC + EGL + K D+
Sbjct: 430 -------------------IKPNDITFLCALSACSHSGLVEEGLCFFESMKK------DY 464
Query: 324 -IQATIIHFYAA------CGRINLA-RLQFELGIKDHIASWNALIA 361
I+ T+ H+ A GR+N A ++ IK I + A++
Sbjct: 465 GIEPTMDHYGAMVDLLGRAGRLNQAWDFIQKMPIKPGITVYGAMLG 510
>gi|224066769|ref|XP_002302206.1| predicted protein [Populus trichocarpa]
gi|222843932|gb|EEE81479.1| predicted protein [Populus trichocarpa]
Length = 681
Score = 332 bits (851), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 201/661 (30%), Positives = 348/661 (52%), Gaps = 39/661 (5%)
Query: 38 AVSQGQQIHSLIFKSGL-ESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMI 96
++ QG+Q+H L FK GL +S + N L+ +Y +CG ++ A +FD + + N MI
Sbjct: 20 SIHQGKQLHILFFKKGLIQSTLSLANRLLQMYTRCGSMTDAHKLFDEMPHRNCFSWNTMI 79
Query: 97 SGYI------RNDRLND-------------------------AREVFDKTPIKCCVSYTS 125
GY+ R+ RL D AR +F++ P + V + S
Sbjct: 80 EGYMKSGNKERSIRLFDMMSNKNDYSWNVVFSGFAKAGEMEIARRLFNEMPNRNGVVWNS 139
Query: 126 MIMGFAQNDCWREALEVFRDMRILGVIP---NEVTLASVISSSVHLGGIWECRMLHGLVI 182
MI +A+N REA+ +F+++ + + + LA+VI + LG I + +H ++
Sbjct: 140 MIHSYARNGSPREAVRLFKELNLDPLDKSCCDTFVLATVIGACTDLGEIQCGKQIHARIL 199
Query: 183 KLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARE 242
++ +++++L+N+Y C L A + + M+E + S + ++ G+A G + AR
Sbjct: 200 IDNMELDSVLTSSLINLYGKCGDLDSAHCVLNTMEEPDDFSLSALITGYANHGRMNDARR 259
Query: 243 LFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMA 302
F R + VV W ++I GY+ EA ++ M G+ + + ++SAC
Sbjct: 260 AFYRKSNSCVVVWNSLISGYVTNNEEIEAFLLFNDMQKKGLKVDFSTLATILSACSSLCN 319
Query: 303 FGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLA-RLQFELGIKDHIASWNALIA 361
G Q+H+ K G C + + + I Y+ CG +N A +L EL D I N++I
Sbjct: 320 SQHGKQMHAYACKVGLICDNVVASAFIDAYSKCGSLNDACKLFSELKTYDTIL-LNSMIT 378
Query: 362 GFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEIT 421
+ +G IEDA+Q+FN M + + SW++MI G +QN P AL+LF M ++ N
Sbjct: 379 VYSNSGKIEDAKQIFNTMPSKSLISWNSMIVGLSQNGCPVEALDLFCMMNKLDLRMNRFN 438
Query: 422 MVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIR 481
+ SV A AS +L+ G + ++ +S +++D Y KCG I ++F +
Sbjct: 439 LTSVISACASISSLELGEQIFARATVVGLDSDEVISTSLVDFYCKCGFIEIGRKLFDTMM 498
Query: 482 DRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLG 541
++ +S WN+++ G A +G L +++++ ++ ITF GVLS C H GLV G
Sbjct: 499 -KSDEIS-WNSMLMGYATNGHGLEALTLFNEMRHAGVRPTEITFTGVLSACDHCGLVKEG 556
Query: 542 ERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASR 601
R+F M+ Y+++P ++HY CMVDL RAG LE+A +I+ MP +AD +W ++L
Sbjct: 557 WRWFNIMQYDYHIDPGIEHYSCMVDLFARAGCLEEAMNLIKRMPFEADASMWSSVLRGCM 616
Query: 602 IHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGF 661
HG ++GE+ A+ + L P + + V LS+I+A +G WE + +RK M++ +++ PG+
Sbjct: 617 AHGEKDLGEKVAQQIIELDPENSGAYVQLSSIFATSGDWESSALVRKVMQERQVQKYPGY 676
Query: 662 S 662
S
Sbjct: 677 S 677
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 132/487 (27%), Positives = 232/487 (47%), Gaps = 33/487 (6%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
L + + C+ + G+QIH+ I +E ++ + +SLINLY KCG + A + ++
Sbjct: 173 FVLATVIGACTDLGEIQCGKQIHARILIDNMELDSVLTSSLINLYGKCGDLDSAHCVLNT 232
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
D + + +I+GY + R+NDAR F + C V + S+I G+ N+ EA +F
Sbjct: 233 MEEPDDFSLSALITGYANHGRMNDARRAFYRKSNSCVVVWNSLISGYVTNNEEIEAFLLF 292
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
DM+ G+ + TLA+++S+ L + +H K+ + ++++ ++ Y C
Sbjct: 293 NDMQKKGLKVDFSTLATILSACSSLCNSQHGKQMHAYACKVGLICDNVVASAFIDAYSKC 352
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYL 263
SL +A LF E+K + + N M+ ++ +G +E A+++F +PSK ++SW +MI G
Sbjct: 353 GSLNDACKLFSELKTYDTILLNSMITVYSNSGKIEDAKQIFNTMPSKSLISWNSMIVGLS 412
Query: 264 QVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDF 323
Q EAL ++ M + N + +ISAC + G QI + G D +
Sbjct: 413 QNGCPVEALDLFCMMNKLDLRMNRFNLTSVISACASISSLELGEQIFARATVVGLDSDEV 472
Query: 324 IQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRD 383
I +++ FY CG I + R F+ +K SWN+++ G+ NG +A LFN M+
Sbjct: 473 ISTSLVDFYCKCGFIEIGRKLFDTMMKSDEISWNSMLMGYATNGHGLEALTLFNEMRH-- 530
Query: 384 VYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG-RWAH 442
AGV+P EIT V A G +KEG RW +
Sbjct: 531 -----------------------------AGVRPTEITFTGVLSACDHCGLVKEGWRWFN 561
Query: 443 EYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGD 502
+ I + ++D++A+ G + A + + S W++++ G HG+
Sbjct: 562 IMQYDYHIDPGIEHYSCMVDLFARAGCLEEAMNLIKRM-PFEADASMWSSVLRGCMAHGE 620
Query: 503 ANLTLKI 509
+L K+
Sbjct: 621 KDLGEKV 627
>gi|222622177|gb|EEE56309.1| hypothetical protein OsJ_05395 [Oryza sativa Japonica Group]
Length = 922
Score = 332 bits (851), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 213/678 (31%), Positives = 330/678 (48%), Gaps = 68/678 (10%)
Query: 49 IFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLD-------------------- 88
+F LE NT N++I+ Y + G I+ A+ +FD+ + D
Sbjct: 118 VFDGMLERNTVAWNAMISCYVQNGDITMARRLFDAMPSRDVSSWNSMLTGYCHSLQMVDA 177
Query: 89 -------P----VACNIMISGYIRNDRLNDAREVFDKTPIKCCV-------SYTSMIMGF 130
P V+ +MISGY R + A ++F K + + S S + G
Sbjct: 178 RNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKMHREGLLPDQSNFASALSAVKGL 237
Query: 131 AQNDCWREALEVF-------RDMRILGVIPNEVT------------LASVISSSVHLGGI 171
D E+L V RD+ I I N + S+I + +
Sbjct: 238 GNLDVL-ESLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIERNEYTWST 296
Query: 172 WECRMLHGLVIKLMIDGF-------VIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSW 224
+ HG I I + + T L+ C + +AR LF+++ E +VSW
Sbjct: 297 MIAALSHGGRIDAAIAVYERDPVKSIACRTALITGLAQCGRIDDARILFEQIPEPIVVSW 356
Query: 225 NVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIA 284
N ++ G+ + G+V A+ELF+++P ++ +SW MI GY Q R EAL + + + G+
Sbjct: 357 NALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGML 416
Query: 285 PNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQ 344
P+ + + AC +A G Q+HS+ VK G F +I Y C + AR
Sbjct: 417 PSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSFACNALITMYGKCRNMEYARQV 476
Query: 345 FELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMAL 404
F + I SWN+ +A ++N ++++AR F+NM RD SW+ +IS YA EQ N A+
Sbjct: 477 FSRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNMLSRDDVSWTTIISAYAHAEQSNEAM 536
Query: 405 ELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMY 464
F M PN + + S G K G+ H + + ++ A+I MY
Sbjct: 537 GAFKTMFCEHELPNSPILTILLGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMY 596
Query: 465 AKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSIT 524
KCG ++ +F + +R + WN II G A HG +K+Y +E + N +T
Sbjct: 597 FKCGCADSR-RIFDLMEER--DIFTWNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVT 653
Query: 525 FIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSM 584
F+G+L+ C HAGLVD G ++FKSM Y + P +HY CMVDLLGR G ++ AE+ I M
Sbjct: 654 FVGLLNACSHAGLVDEGWKFFKSMSQDYGLTPLPEHYACMVDLLGRTGDVQGAEQFIYDM 713
Query: 585 PMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAF 644
P++ D VIW LL A +IH N E+G+RAA+ L ++PS+ + V+LSNIY+ G W +
Sbjct: 714 PIEPDTVIWSALLGACKIHKNAEIGKRAAEKLFRIEPSNAGNYVMLSNIYSSLGMWGEVA 773
Query: 645 SIRKEMRDCGMKRLPGFS 662
+RK M+ G+ + PG S
Sbjct: 774 EVRKIMKQQGVIKEPGCS 791
Score = 198 bits (503), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 125/471 (26%), Positives = 232/471 (49%), Gaps = 36/471 (7%)
Query: 38 AVSQGQQIHSLI--FKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIM 95
A+S G +I + I ++ + + +LI A+CG I A+ +F+ V+ N +
Sbjct: 300 ALSHGGRIDAAIAVYERDPVKSIACRTALITGLAQCGRIDDARILFEQIPEPIVVSWNAL 359
Query: 96 ISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNE 155
I+GY++N +N+A+E+FDK P + +S+ MI G+AQN EAL + +++ G++P+
Sbjct: 360 ITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSL 419
Query: 156 VTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDE 215
+L S+ + ++ + +H L +K+ L+ MY C ++ AR +F
Sbjct: 420 SSLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSFACNALITMYGKCRNMEYARQVFSR 479
Query: 216 MKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMY 275
M ++IVSWN L + L++ AR F+ + S+D VSW T+I Y E+ +EA+ +
Sbjct: 480 MVTKDIVSWNSFLAALVQNDLLDEARNTFDNMLSRDDVSWTTIISAYAHAEQSNEAMGAF 539
Query: 276 RAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAAC 335
+ M C+ PN ++ L+ CG A G QIH++ +K G D + +I Y C
Sbjct: 540 KTMFCEHELPNSPILTILLGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMYFKC 599
Query: 336 GRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYA 395
G + R+ F+L + I +WN +I G+ ++G+ +A +++ +M+
Sbjct: 600 GCADSRRI-FDLMEERDIFTWNTIITGYAQHGLGREAIKMYQHMES-------------- 644
Query: 396 QNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG-RWAHEYVLNNSITLND 454
AGV PNE+T V + A + +G + EG ++ + +T
Sbjct: 645 -----------------AGVLPNEVTFVGLLNACSHAGLVDEGWKFFKSMSQDYGLTPLP 687
Query: 455 NLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANL 505
A ++D+ + G + A + Y + +V W+A++ +H +A +
Sbjct: 688 EHYACMVDLLGRTGDVQGAEQFIYDMPIEPDTV-IWSALLGACKIHKNAEI 737
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 172/678 (25%), Positives = 283/678 (41%), Gaps = 127/678 (18%)
Query: 87 LDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDM 146
L+ C+ I R R+ +AREVFD P + +++ SMI + N A RD+
Sbjct: 32 LEVSGCSARIRDLGRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAA----RDL 87
Query: 147 RILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSL 206
N T A ++S LG + E R V M++ + +++ Y +
Sbjct: 88 YDAISGGNMRTGAILLSGYGRLGRVLEARR----VFDGMLERNTVAWNAMISCYVQNGDI 143
Query: 207 VEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVE 266
AR LFD M R++ SWN ML G+ + + AR LFE++P +++VSW MI GY ++E
Sbjct: 144 TMARRLFDAMPSRDVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIE 203
Query: 267 RLSEALTMYRAMLCDGIAPNDVMIVDLISACG-----------RAMAFGEGLQIHSIIVK 315
+A ++ M +G+ P+ +SA R +A G + +I
Sbjct: 204 NHGKAWDIFCKMHREGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGT 263
Query: 316 AGFDCYD---FIQATIIHFY---------------------------------------- 332
A + Y + T I F+
Sbjct: 264 AILNVYSRDTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVYERDPVKSIA 323
Query: 333 ---------AACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRD 383
A CGRI+ AR+ FE + + SWNALI G+++NGM+ +A++LF+ M R+
Sbjct: 324 CRTALITGLAQCGRIDDARILFEQIPEPIVVSWNALITGYMQNGMVNEAKELFDKMPFRN 383
Query: 384 VYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHE 443
SW+ MI+GYAQN + AL L + +G+ P+ ++ S+F A ++ L+ G H
Sbjct: 384 TISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHS 443
Query: 444 YVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDA 503
+ N A+I MY KC ++ A +VF R T + WN+ + L +
Sbjct: 444 LAVKVGCQFNSFACNALITMYGKCRNMEYARQVFS--RMVTKDIVSWNSFLAALVQNDLL 501
Query: 504 NLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGC 563
+ + ++ R + +++ ++S HA + FK+M E +L +
Sbjct: 502 DEARNTFDNMLSR----DDVSWTTIISAYAHAEQSNEAMGAFKTM----FCEHELPNSPI 553
Query: 564 MVDLLGRAGQLE-----------------DAEEVIR----SMPMKA-------------- 588
+ LLG G L D+E ++ SM K
Sbjct: 554 LTILLGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMYFKCGCADSRRIFDLMEE 613
Query: 589 -DVVIWGTLLAASRIHGNVEVGERAAK-----SLAGLQPSHGPSRVLLSNIYADAGRWED 642
D+ W T++ HG +G A K AG+ P+ + V L N + AG ++
Sbjct: 614 RDIFTWNTIITGYAQHG---LGREAIKMYQHMESAGVLPNE-VTFVGLLNACSHAGLVDE 669
Query: 643 AFSIRKEM-RDCGMKRLP 659
+ K M +D G+ LP
Sbjct: 670 GWKFFKSMSQDYGLTPLP 687
Score = 139 bits (349), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 95/340 (27%), Positives = 161/340 (47%), Gaps = 34/340 (10%)
Query: 25 ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSC 84
+L S CS +A+ G Q+HSL K G + N+F N+LI +Y KC + A+ +F
Sbjct: 421 SLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSFACNALITMYGKCRNMEYARQVFSRM 480
Query: 85 STLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFR 144
T D V+ N ++ ++ND L++AR FD + VS+T++I +A + EA+ F+
Sbjct: 481 VTKDIVSWNSFLAALVQNDLLDEARNTFDNMLSRDDVSWTTIISAYAHAEQSNEAMGAFK 540
Query: 145 DMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCS 204
M +PN L ++ LG + +H + IKL +D +I++ L++MY C
Sbjct: 541 TMFCEHELPNSPILTILLGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMYFKCG 600
Query: 205 SLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQ 264
++R +FD M+ER+I +WN ++ G+A+ GL
Sbjct: 601 C-ADSRRIFDLMEERDIFTWNTIITGYAQHGLGR-------------------------- 633
Query: 265 VERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQ-IHSIIVKAGFDCYDF 323
EA+ MY+ M G+ PN+V V L++AC A EG + S+ G
Sbjct: 634 -----EAIKMYQHMESAGVLPNEVTFVGLLNACSHAGLVDEGWKFFKSMSQDYGLTPLPE 688
Query: 324 IQATIIHFYAACGRINLA-RLQFELGIKDHIASWNALIAG 362
A ++ G + A + +++ I+ W+AL+
Sbjct: 689 HYACMVDLLGRTGDVQGAEQFIYDMPIEPDTVIWSALLGA 728
>gi|297720883|ref|NP_001172804.1| Os02g0151000 [Oryza sativa Japonica Group]
gi|51535971|dbj|BAD38052.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|218190072|gb|EEC72499.1| hypothetical protein OsI_05871 [Oryza sativa Indica Group]
gi|255670608|dbj|BAH91533.1| Os02g0151000 [Oryza sativa Japonica Group]
Length = 922
Score = 332 bits (851), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 213/678 (31%), Positives = 330/678 (48%), Gaps = 68/678 (10%)
Query: 49 IFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLD-------------------- 88
+F LE NT N++I+ Y + G I+ A+ +FD+ + D
Sbjct: 118 VFDGMLERNTVAWNAMISCYVQNGDITMARRLFDAMPSRDVSSWNSMLTGYCHSLQMVDA 177
Query: 89 -------P----VACNIMISGYIRNDRLNDAREVFDKTPIKCCV-------SYTSMIMGF 130
P V+ +MISGY R + A ++F K + + S S + G
Sbjct: 178 RNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKMHREGLLPDQSNFASALSAVKGL 237
Query: 131 AQNDCWREALEVF-------RDMRILGVIPNEVT------------LASVISSSVHLGGI 171
D E+L V RD+ I I N + S+I + +
Sbjct: 238 GNLDVL-ESLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKFFESMIERNEYTWST 296
Query: 172 WECRMLHGLVIKLMIDGF-------VIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSW 224
+ HG I I + + T L+ C + +AR LF+++ E +VSW
Sbjct: 297 MIAALSHGGRIDAAIAVYERDPVKSIACRTALITGLAQCGRIDDARILFEQIPEPIVVSW 356
Query: 225 NVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIA 284
N ++ G+ + G+V A+ELF+++P ++ +SW MI GY Q R EAL + + + G+
Sbjct: 357 NALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGML 416
Query: 285 PNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQ 344
P+ + + AC +A G Q+HS+ VK G F +I Y C + AR
Sbjct: 417 PSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSFACNALITMYGKCRNMEYARQV 476
Query: 345 FELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMAL 404
F + I SWN+ +A ++N ++++AR F+NM RD SW+ +IS YA EQ N A+
Sbjct: 477 FSRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNMLSRDDVSWTTIISAYAHAEQSNEAM 536
Query: 405 ELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMY 464
F M PN + + S G K G+ H + + ++ A+I MY
Sbjct: 537 GAFKTMFCEHELPNSPILTILLGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMY 596
Query: 465 AKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSIT 524
KCG ++ +F + +R + WN II G A HG +K+Y +E + N +T
Sbjct: 597 FKCGCADSR-RIFDLMEER--DIFTWNTIITGYAQHGLGREAIKMYQHMESAGVLPNEVT 653
Query: 525 FIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSM 584
F+G+L+ C HAGLVD G ++FKSM Y + P +HY CMVDLLGR G ++ AE+ I M
Sbjct: 654 FVGLLNACSHAGLVDEGWKFFKSMSQDYGLTPLPEHYACMVDLLGRTGDVQGAEQFIYDM 713
Query: 585 PMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAF 644
P++ D VIW LL A +IH N E+G+RAA+ L ++PS+ + V+LSNIY+ G W +
Sbjct: 714 PIEPDTVIWSALLGACKIHKNAEIGKRAAEKLFRIEPSNAGNYVMLSNIYSSLGMWGEVA 773
Query: 645 SIRKEMRDCGMKRLPGFS 662
+RK M+ G+ + PG S
Sbjct: 774 EVRKIMKQQGVIKEPGCS 791
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 125/471 (26%), Positives = 232/471 (49%), Gaps = 36/471 (7%)
Query: 38 AVSQGQQIHSLI--FKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIM 95
A+S G +I + I ++ + + +LI A+CG I A+ +F+ V+ N +
Sbjct: 300 ALSHGGRIDAAIAVYERDPVKSIACRTALITGLAQCGRIDDARILFEQIPEPIVVSWNAL 359
Query: 96 ISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNE 155
I+GY++N +N+A+E+FDK P + +S+ MI G+AQN EAL + +++ G++P+
Sbjct: 360 ITGYMQNGMVNEAKELFDKMPFRNTISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSL 419
Query: 156 VTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDE 215
+L S+ + ++ + +H L +K+ L+ MY C ++ AR +F
Sbjct: 420 SSLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSFACNALITMYGKCRNMEYARQVFSR 479
Query: 216 MKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMY 275
M ++IVSWN L + L++ AR F+ + S+D VSW T+I Y E+ +EA+ +
Sbjct: 480 MVTKDIVSWNSFLAALVQNDLLDEARNTFDNMLSRDDVSWTTIISAYAHAEQSNEAMGAF 539
Query: 276 RAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAAC 335
+ M C+ PN ++ L+ CG A G QIH++ +K G D + +I Y C
Sbjct: 540 KTMFCEHELPNSPILTILLGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMYFKC 599
Query: 336 GRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYA 395
G + R+ F+L + I +WN +I G+ ++G+ +A +++ +M+
Sbjct: 600 GCADSRRI-FDLMEERDIFTWNTIITGYAQHGLGREAIKMYQHMES-------------- 644
Query: 396 QNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG-RWAHEYVLNNSITLND 454
AGV PNE+T V + A + +G + EG ++ + +T
Sbjct: 645 -----------------AGVLPNEVTFVGLLNACSHAGLVDEGWKFFKSMSQDYGLTPLP 687
Query: 455 NLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANL 505
A ++D+ + G + A + Y + +V W+A++ +H +A +
Sbjct: 688 EHYACMVDLLGRTGDVQGAEQFIYDMPIEPDTV-IWSALLGACKIHKNAEI 737
Score = 179 bits (454), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 172/678 (25%), Positives = 283/678 (41%), Gaps = 127/678 (18%)
Query: 87 LDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDM 146
L+ C+ I R R+ +AREVFD P + +++ SMI + N A RD+
Sbjct: 32 LEVSGCSARIRDLGRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAA----RDL 87
Query: 147 RILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSL 206
N T A ++S LG + E R V M++ + +++ Y +
Sbjct: 88 YDAISGGNMRTGAILLSGYGRLGRVLEARR----VFDGMLERNTVAWNAMISCYVQNGDI 143
Query: 207 VEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVE 266
AR LFD M R++ SWN ML G+ + + AR LFE++P +++VSW MI GY ++E
Sbjct: 144 TMARRLFDAMPSRDVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIE 203
Query: 267 RLSEALTMYRAMLCDGIAPNDVMIVDLISACG-----------RAMAFGEGLQIHSIIVK 315
+A ++ M +G+ P+ +SA R +A G + +I
Sbjct: 204 NHGKAWDIFCKMHREGLLPDQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGT 263
Query: 316 AGFDCYD---FIQATIIHFY---------------------------------------- 332
A + Y + T I F+
Sbjct: 264 AILNVYSRDTSVLDTAIKFFESMIERNEYTWSTMIAALSHGGRIDAAIAVYERDPVKSIA 323
Query: 333 ---------AACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRD 383
A CGRI+ AR+ FE + + SWNALI G+++NGM+ +A++LF+ M R+
Sbjct: 324 CRTALITGLAQCGRIDDARILFEQIPEPIVVSWNALITGYMQNGMVNEAKELFDKMPFRN 383
Query: 384 VYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHE 443
SW+ MI+GYAQN + AL L + +G+ P+ ++ S+F A ++ L+ G H
Sbjct: 384 TISWAGMIAGYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHS 443
Query: 444 YVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDA 503
+ N A+I MY KC ++ A +VF R T + WN+ + L +
Sbjct: 444 LAVKVGCQFNSFACNALITMYGKCRNMEYARQVFS--RMVTKDIVSWNSFLAALVQNDLL 501
Query: 504 NLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGC 563
+ + ++ R + +++ ++S HA + FK+M E +L +
Sbjct: 502 DEARNTFDNMLSR----DDVSWTTIISAYAHAEQSNEAMGAFKTM----FCEHELPNSPI 553
Query: 564 MVDLLGRAGQLE-----------------DAEEVIR----SMPMKA-------------- 588
+ LLG G L D+E ++ SM K
Sbjct: 554 LTILLGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMYFKCGCADSRRIFDLMEE 613
Query: 589 -DVVIWGTLLAASRIHGNVEVGERAAK-----SLAGLQPSHGPSRVLLSNIYADAGRWED 642
D+ W T++ HG +G A K AG+ P+ + V L N + AG ++
Sbjct: 614 RDIFTWNTIITGYAQHG---LGREAIKMYQHMESAGVLPNE-VTFVGLLNACSHAGLVDE 669
Query: 643 AFSIRKEM-RDCGMKRLP 659
+ K M +D G+ LP
Sbjct: 670 GWKFFKSMSQDYGLTPLP 687
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 95/340 (27%), Positives = 161/340 (47%), Gaps = 34/340 (10%)
Query: 25 ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSC 84
+L S CS +A+ G Q+HSL K G + N+F N+LI +Y KC + A+ +F
Sbjct: 421 SLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSFACNALITMYGKCRNMEYARQVFSRM 480
Query: 85 STLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFR 144
T D V+ N ++ ++ND L++AR FD + VS+T++I +A + EA+ F+
Sbjct: 481 VTKDIVSWNSFLAALVQNDLLDEARNTFDNMLSRDDVSWTTIISAYAHAEQSNEAMGAFK 540
Query: 145 DMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCS 204
M +PN L ++ LG + +H + IKL +D +I++ L++MY C
Sbjct: 541 TMFCEHELPNSPILTILLGVCGSLGASKIGQQIHTVAIKLGMDSELIVANALISMYFKCG 600
Query: 205 SLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQ 264
++R +FD M+ER+I +WN ++ G+A+ GL
Sbjct: 601 C-ADSRRIFDLMEERDIFTWNTIITGYAQHGLGR-------------------------- 633
Query: 265 VERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQ-IHSIIVKAGFDCYDF 323
EA+ MY+ M G+ PN+V V L++AC A EG + S+ G
Sbjct: 634 -----EAIKMYQHMESAGVLPNEVTFVGLLNACSHAGLVDEGWKFFKSMSQDYGLTPLPE 688
Query: 324 IQATIIHFYAACGRINLA-RLQFELGIKDHIASWNALIAG 362
A ++ G + A + +++ I+ W+AL+
Sbjct: 689 HYACMVDLLGRTGDVQGAEQFIYDMPIEPDTVIWSALLGA 728
>gi|115488988|ref|NP_001066981.1| Os12g0552300 [Oryza sativa Japonica Group]
gi|113649488|dbj|BAF30000.1| Os12g0552300 [Oryza sativa Japonica Group]
Length = 1175
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 203/639 (31%), Positives = 316/639 (49%), Gaps = 95/639 (14%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+ + S L C++ + +G Q+HS +FK+G+ S+ ++ SL++LY KCG + A +F+S
Sbjct: 245 VTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNS 304
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
+DR N V + M++ F Q + ++ E+F
Sbjct: 305 ------------------SDRTN-------------VVLWNLMLVAFGQINDLAKSFELF 333
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
M+ G+ PN+ T ++ + I +H L +K + + +S L++MY
Sbjct: 334 CQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMY--- 390
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYL 263
+K G +E AR + E + KDVVSW +MI GY+
Sbjct: 391 ----------------------------SKYGWLEKARRVLEMLKEKDVVSWTSMIAGYV 422
Query: 264 QVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDF 323
Q E +AL ++ M GI P+++ + IS C A +GLQIH+ I +G+
Sbjct: 423 QHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYS---- 478
Query: 324 IQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRD 383
++ WNAL+ + R G I +A F ++ +D
Sbjct: 479 ---------------------------GDVSIWNALVNLYARCGRIREAFSSFEEIEHKD 511
Query: 384 VYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHE 443
+W+ ++SG+AQ+ AL++F M +GVK N T VS A A+ +K+G+ H
Sbjct: 512 EITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHA 571
Query: 444 YVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDA 503
V+ + + A+I +Y KCGS A F + +R VS WN II + HG
Sbjct: 572 RVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERN-EVS-WNTIITSCSQHGRG 629
Query: 504 NLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGC 563
L ++ ++K IK N +TFIGVL+ C H GLV+ G YFKSM Y + P HY C
Sbjct: 630 LEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYAC 689
Query: 564 MVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSH 623
++D+ GRAGQL+ A++ I MP+ AD ++W TLL+A ++H N+EVGE AAK L L+P
Sbjct: 690 VIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLSACKVHKNIEVGEFAAKHLLELEPHD 749
Query: 624 GPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
S VLLSN YA +W + +RK MRD G+++ PG S
Sbjct: 750 SASYVLLSNAYAVTEKWANRDQVRKMMRDRGVRKEPGRS 788
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 112/428 (26%), Positives = 194/428 (45%), Gaps = 68/428 (15%)
Query: 177 LHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGL 236
+H + + + I+ L+++Y ++ AR +F+E+ R+ VSW ML+G+A+ GL
Sbjct: 64 IHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGL 123
Query: 237 VELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISA 296
E EAL +YR M G+ P ++ ++S+
Sbjct: 124 GE-------------------------------EALGLYRQMHRAGVVPTPYVLSSVLSS 152
Query: 297 CGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQF-ELGIKDHIAS 355
C +A F +G IH+ K GF F+ +I Y CG LA F ++ +D + +
Sbjct: 153 CTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTV-T 211
Query: 356 WNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGV 415
+N LI+G + G E ALE+F M +G+
Sbjct: 212 FNTLISGHAQCGHGEH-------------------------------ALEIFEEMQFSGL 240
Query: 416 KPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFE 475
P+ +T+ S+ A AS G L++G H Y+ I+ + + +++D+Y KCG + TA
Sbjct: 241 SPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETAL- 299
Query: 476 VFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHA 535
V ++ DR T+V WN ++ D + +++ ++ I+ N T+ +L TC
Sbjct: 300 VIFNSSDR-TNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCT 358
Query: 536 GLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGT 595
+DLGE+ S+ E D+ G ++D+ + G LE A V+ + K DVV W +
Sbjct: 359 REIDLGEQ-IHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEK-DVVSWTS 416
Query: 596 LLAASRIH 603
++A H
Sbjct: 417 MIAGYVQH 424
>gi|225466163|ref|XP_002263755.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 624
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 170/466 (36%), Positives = 264/466 (56%), Gaps = 8/466 (1%)
Query: 203 CSSLVEARSLFDEMKERNIVSWN------VMLNGFAKAGLVELARELFERIPSKDVVSWG 256
CS++ E + ++ + + N + +K+G + A E+F++IP D +
Sbjct: 30 CSTMAELKQYHSQIIRLGLSADNDAMGRVIKFCAISKSGDLNYALEVFDKIPHPDAYIYN 89
Query: 257 TMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKA 316
T+ GYL+ + + MY ML ++PN LI AC A EG QIH+ ++K
Sbjct: 90 TIFRGYLRWQLARNCIFMYSRMLHKSVSPNKFTYPPLIRACCIDYAIEEGKQIHAHVLKF 149
Query: 317 GFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLF 376
GF F +IH Y + AR F+ + + SW +LI G+ + G ++ AR++F
Sbjct: 150 GFGADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRDVVSWTSLITGYSQWGFVDKAREVF 209
Query: 377 NNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLK 436
M +R+ SW+AMI+ Y Q+ + + A LF M V ++ S+ A G L+
Sbjct: 210 ELMPERNSVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAASMLSACTGLGALE 269
Query: 437 EGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICG 496
+G+W H Y+ + I L+ L+ +IDMY KCG + A EVF + + +S WN +I G
Sbjct: 270 QGKWIHGYIEKSGIELDSKLATTVIDMYCKCGCLEKASEVFNELPQK--GISSWNCMIGG 327
Query: 497 LAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEP 556
LAMHG ++++ ++E+ + + ITF+ VLS C H+GLV+ G+ YF+ M V ++P
Sbjct: 328 LAMHGKGEAAIELFKEMEREMVAPDGITFVNVLSACAHSGLVEEGKHYFQYMTEVLGLKP 387
Query: 557 DLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSL 616
++H+GCMVDLLGRAG LE+A ++I MP+ D + G L+ A RIHGN E+GE+ K +
Sbjct: 388 GMEHFGCMVDLLGRAGLLEEARKLINEMPVNPDAGVLGALVGACRIHGNTELGEQIGKKV 447
Query: 617 AGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
L+P + VLL+N+YA AGRWED +RK M D G+K+ PGFS
Sbjct: 448 IELEPHNSGRYVLLANLYASAGRWEDVAKVRKLMNDRGVKKAPGFS 493
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 115/417 (27%), Positives = 193/417 (46%), Gaps = 47/417 (11%)
Query: 101 RNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLAS 160
++ LN A EVFDK P Y ++ G+ + R + ++ M V PN+ T
Sbjct: 66 KSGDLNYALEVFDKIPHPDAYIYNTIFRGYLRWQLARNCIFMYSRMLHKSVSPNKFTYPP 125
Query: 161 VISSSVHLGGIWECRMLHGLVIKLMI--DGFVIISTNLLNMYCVCSSLVEARSLFDEMKE 218
+I + I E + +H V+K DGF + NL++MY SL +AR +FD M +
Sbjct: 126 LIRACCIDYAIEEGKQIHAHVLKFGFGADGFSL--NNLIHMYVNFQSLEQARRVFDNMPQ 183
Query: 219 RNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAM 278
R++VSW ++ G+++ G V+ ARE+FE +P ++ VSW MI Y+Q RL EA ++ M
Sbjct: 184 RDVVSWTSLITGYSQWGFVDKAREVFELMPERNSVSWNAMIAAYVQSNRLHEAFALFDRM 243
Query: 279 LCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRI 338
+ + + + ++SAC A +G IH I K+G + + T+I Y CG +
Sbjct: 244 RLENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGCL 303
Query: 339 NLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNE 398
A F + I+SWN +I G +G E A +LF M++
Sbjct: 304 EKASEVFNELPQKGISSWNCMIGGLAMHGKGEAAIELFKEMERE---------------- 347
Query: 399 QPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLS- 457
V P+ IT V+V A A SG ++EG+ +Y + + L +
Sbjct: 348 ---------------MVAPDGITFVNVLSACAHSGLVEEGKHYFQY-MTEVLGLKPGMEH 391
Query: 458 -AAIIDMYAKCGSINTAFEVFYHIRDRTTSVSP----WNAIICGLAMHGDANLTLKI 509
++D+ + G + A ++ + V+P A++ +HG+ L +I
Sbjct: 392 FGCMVDLLGRAGLLEEARKLINEM-----PVNPDAGVLGALVGACRIHGNTELGEQI 443
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 95/350 (27%), Positives = 170/350 (48%), Gaps = 61/350 (17%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
+R C A+ +G+QIH+ + K G ++ F N+LI++Y + QA+ +FD+ D
Sbjct: 127 IRACCIDYAIEEGKQIHAHVLKFGFGADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRDV 186
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
V+ +I+GY + ++ AREVF+ P + VS+ +MI + Q++ EA +F MR+
Sbjct: 187 VSWTSLITGYSQWGFVDKAREVFELMPERNSVSWNAMIAAYVQSNRLHEAFALFDRMRLE 246
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
V+ ++ AS++S+ LG + + + +HG + K I+ ++T +++MYC C L +A
Sbjct: 247 NVVLDKFVAASMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGCLEKA 306
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLS 269
+F+E+ ++ I SWN M+ G A G E A ELF+
Sbjct: 307 SEVFNELPQKGISSWNCMIGGLAMHGKGEAAIELFKE----------------------- 343
Query: 270 EALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATII 329
M R M +AP+ + V+++SAC HS +V+ G + ++
Sbjct: 344 ----MEREM----VAPDGITFVNVLSACA-----------HSGLVEEGKHYFQYMTEV-- 382
Query: 330 HFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNM 379
LG+K + + ++ R G++E+AR+L N M
Sbjct: 383 -----------------LGLKPGMEHFGCMVDLLGRAGLLEEARKLINEM 415
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 88/194 (45%), Gaps = 40/194 (20%)
Query: 28 SALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTL 87
S L C+ A+ QG+ IH I KSG+E ++ + ++I++Y KCG + +A
Sbjct: 257 SMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGCLEKAS--------- 307
Query: 88 DPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMR 147
EVF++ P K S+ MI G A + A+E+F++M
Sbjct: 308 ----------------------EVFNELPQKGISSWNCMIGGLAMHGKGEAAIELFKEME 345
Query: 148 ILGVIPNEVTLASVISSSVHLGGIWECR-----MLHGLVIKLMIDGFVIISTNLLNMYCV 202
V P+ +T +V+S+ H G + E + M L +K ++ F ++++
Sbjct: 346 REMVAPDGITFVNVLSACAHSGLVEEGKHYFQYMTEVLGLKPGMEHF----GCMVDLLGR 401
Query: 203 CSSLVEARSLFDEM 216
L EAR L +EM
Sbjct: 402 AGLLEEARKLINEM 415
>gi|449438556|ref|XP_004137054.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Cucumis sativus]
gi|449479088|ref|XP_004155501.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Cucumis sativus]
Length = 855
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 205/651 (31%), Positives = 336/651 (51%), Gaps = 78/651 (11%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
L+ C ++ G +H+++ +GL SN FI NS++ +Y +CG
Sbjct: 134 LKACGEIPSLRHGASVHAIVCANGLGSNVFICNSIVAMYGRCG----------------- 176
Query: 90 VACNIMISGYIRNDRLNDAREVFDKT---PIKCCVSYTSMIMGFAQNDCWREALEV-FR- 144
L+DA ++FD+ I+ VS+ S++ + Q R AL + FR
Sbjct: 177 --------------ALDDAHQMFDEVLERKIEDIVSWNSILAAYVQGGQSRTALRIAFRM 222
Query: 145 -DMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
+ L + P+ +TL +++ + + + + +HG ++ + V + L++MY C
Sbjct: 223 GNHYSLKLRPDAITLVNILPACASVFALQHGKQVHGFSVRNGLVDDVFVGNALVSMYAKC 282
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKD----VVSWGTMI 259
S + EA +F+ +K++++VSWN M+ G+++ G + A LF+ + +D V++W +I
Sbjct: 283 SKMNEANKVFEGIKKKDVVSWNAMVTGYSQIGSFDSALSLFKMMQEEDIKLDVITWSAVI 342
Query: 260 DGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFD 319
GY Q EAL ++R M G+ PN V + L+S C A G Q H+ ++K
Sbjct: 343 AGYAQKGHGFEALDVFRQMQLYGLEPNVVTLASLLSGCASVGALLYGKQTHAYVIK---- 398
Query: 320 CYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNM 379
N+ L + +D + N LI + + AR +F+++
Sbjct: 399 -------------------NILNLNWN-DKEDDLLVLNGLIDMYAKCKSYRVARSIFDSI 438
Query: 380 QKRD--VYSWSAMISGYAQNEQPNMALELFHGMVD--AGVKPNEITMVSVFCAIASSGTL 435
+ +D V +W+ MI GYAQ+ + N AL+LF + +KPN T+ A A G L
Sbjct: 439 EGKDKNVVTWTVMIGGYAQHGEANDALKLFAQIFKQKTSLKPNAFTLSCALMACARLGEL 498
Query: 436 KEGRWAHEYVLNNSITLNDN----LSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWN 491
+ GR H Y L N N++ + +IDMY+K G I+ A VF +++ R +V W
Sbjct: 499 RLGRQLHAYALRNE---NESEVLYVGNCLIDMYSKSGDIDAARAVFDNMKLR--NVVSWT 553
Query: 492 AIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSV 551
+++ G MHG L ++ ++K ++ ITF+ VL C H+G+VD G YF M
Sbjct: 554 SLMTGYGMHGRGEEALHLFDQMQKLGFAVDGITFLVVLYACSHSGMVDQGMIYFHDMVKG 613
Query: 552 YNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGER 611
+ + P +HY CMVDLLGRAG+L +A E+I++M M+ V+W LL+ASRIH N+E+GE
Sbjct: 614 FGITPGAEHYACMVDLLGRAGRLNEAMELIKNMSMEPTAVVWVALLSASRIHANIELGEY 673
Query: 612 AAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
AA L L + S LLSN+YA+A RW+D IR M+ G+++ PG S
Sbjct: 674 AASKLTELGAENDGSYTLLSNLYANARRWKDVARIRSLMKHTGIRKRPGCS 724
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 132/503 (26%), Positives = 237/503 (47%), Gaps = 78/503 (15%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+ LV+ L C++ A+ G+Q+H ++GL + F+ N+L+++YAKC +++A +F+
Sbjct: 235 ITLVNILPACASVFALQHGKQVHGFSVRNGLVDDVFVGNALVSMYAKCSKMNEANKVFEG 294
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVF---DKTPIKC-CVSYTSMIMGFAQNDCWREA 139
D V+ N M++GY + + A +F + IK ++++++I G+AQ EA
Sbjct: 295 IKKKDVVSWNAMVTGYSQIGSFDSALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEA 354
Query: 140 LEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMI-------DGFVII 192
L+VFR M++ G+ PN VTLAS++S +G + + H VIK ++ + +++
Sbjct: 355 LDVFRQMQLYGLEPNVVTLASLLSGCASVGALLYGKQTHAYVIKNILNLNWNDKEDDLLV 414
Query: 193 STNLLNMYCVCSSLVEARSLFD--EMKERNIVSWNVMLNGFAKAGLVELARELFERIPSK 250
L++MY C S ARS+FD E K++N+V+W VM+ G+A+ G A +LF +I +
Sbjct: 415 LNGLIDMYAKCKSYRVARSIFDSIEGKDKNVVTWTVMIGGYAQHGEANDALKLFAQIFKQ 474
Query: 251 DVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIH 310
+ PN + + AC R G Q+H
Sbjct: 475 KT-----------------------------SLKPNAFTLSCALMACARLGELRLGRQLH 505
Query: 311 SIIVKAGFDC-YDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMI 369
+ ++ + ++ +I Y+ G I+ AR F+ ++ SW +L+ G+ +G
Sbjct: 506 AYALRNENESEVLYVGNCLIDMYSKSGDIDAARAVFDNMKLRNVVSWTSLMTGYGMHGRG 565
Query: 370 EDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAI 429
E+A LF+ MQK G + IT + V A
Sbjct: 566 EEALHLFDQMQK-------------------------------LGFAVDGITFLVVLYAC 594
Query: 430 ASSGTLKEGR-WAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVS 488
+ SG + +G + H+ V IT A ++D+ + G +N A E+ ++ T+V
Sbjct: 595 SHSGMVDQGMIYFHDMVKGFGITPGAEHYACMVDLLGRAGRLNEAMELIKNMSMEPTAVV 654
Query: 489 PWNAIICGLAMHGDANLTLKIYS 511
W A++ +H AN+ L Y+
Sbjct: 655 -WVALLSASRIH--ANIELGEYA 674
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 89/370 (24%), Positives = 169/370 (45%), Gaps = 39/370 (10%)
Query: 196 LLNMYCVCSSLVEARSLFDEMKERNIVS-WNVMLNGFAKAGLVELARELFER-IPSKDVV 253
L+++ C +L+ A+ ++ ++ + + + G A L +R IPS V
Sbjct: 33 LISLLRQCKTLINAKLAHQQIFVHGFTEMFSYAVGAYIECGASAEAVSLLQRLIPSHSTV 92
Query: 254 SW-GTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSI 312
W +I +++ L + L Y M G P+ ++ ACG + G +H+I
Sbjct: 93 FWWNALIRRSVKLGLLDDTLGFYCQMQRLGWLPDHYTFPFVLKACGEIPSLRHGASVHAI 152
Query: 313 IVKAGFDCYDFIQATIIHFYAACGRINLARLQF----ELGIKDHIASWNALIAGFIRNGM 368
+ G FI +I+ Y CG ++ A F E I+D I SWN+++A +++ G
Sbjct: 153 VCANGLGSNVFICNSIVAMYGRCGALDDAHQMFDEVLERKIED-IVSWNSILAAYVQGGQ 211
Query: 369 IEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCA 428
A ++ M + +L+L +P+ IT+V++ A
Sbjct: 212 SRTALRIAFRMGN-------------------HYSLKL---------RPDAITLVNILPA 243
Query: 429 IASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVS 488
AS L+ G+ H + + N + + + A++ MYAKC +N A +VF I+ + V
Sbjct: 244 CASVFALQHGKQVHGFSVRNGLVDDVFVGNALVSMYAKCSKMNEANKVFEGIKKK--DVV 301
Query: 489 PWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSM 548
WNA++ G + G + L ++ +++ +IKL+ IT+ V++ G F+ M
Sbjct: 302 SWNAMVTGYSQIGSFDSALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDVFRQM 361
Query: 549 KSVYNVEPDL 558
+ +Y +EP++
Sbjct: 362 Q-LYGLEPNV 370
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/247 (21%), Positives = 103/247 (41%), Gaps = 10/247 (4%)
Query: 360 IAGFIRNGMIEDARQLFNNM--QKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKP 417
+ +I G +A L + V+ W+A+I + + L + M G P
Sbjct: 66 VGAYIECGASAEAVSLLQRLIPSHSTVFWWNALIRRSVKLGLLDDTLGFYCQMQRLGWLP 125
Query: 418 NEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVF 477
+ T V A +L+ G H V N + N + +I+ MY +CG+++ A ++F
Sbjct: 126 DHYTFPFVLKACGEIPSLRHGASVHAIVCANGLGSNVFICNSIVAMYGRCGALDDAHQMF 185
Query: 478 YHIRDRTTS-VSPWNAIICGLAMHGDANLTLKIYSDLEKR---NIKLNSITFIGVLSTCC 533
+ +R + WN+I+ G + L+I + ++ ++IT + +L C
Sbjct: 186 DEVLERKIEDIVSWNSILAAYVQGGQSRTALRIAFRMGNHYSLKLRPDAITLVNILPACA 245
Query: 534 HAGLVDLGERYFKSMKSVYNVEPDLKHYG-CMVDLLGRAGQLEDAEEVIRSMPMKADVVI 592
+ G++ SV N D G +V + + ++ +A +V + K DVV
Sbjct: 246 SVFALQHGKQVHGF--SVRNGLVDDVFVGNALVSMYAKCSKMNEANKVFEGIK-KKDVVS 302
Query: 593 WGTLLAA 599
W ++
Sbjct: 303 WNAMVTG 309
Score = 48.1 bits (113), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 63/113 (55%), Gaps = 4/113 (3%)
Query: 3 LDHFHSVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNT-FIQ 61
L F +F QK +L+ + + L+ AL C+ + G+Q+H+ ++ ES ++
Sbjct: 465 LKLFAQIFK-QKTSLKPNAFTLS--CALMACARLGELRLGRQLHAYALRNENESEVLYVG 521
Query: 62 NSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDK 114
N LI++Y+K G I A+++FD+ + V+ +++GY + R +A +FD+
Sbjct: 522 NCLIDMYSKSGDIDAARAVFDNMKLRNVVSWTSLMTGYGMHGRGEEALHLFDQ 574
>gi|296089800|emb|CBI39619.3| unnamed protein product [Vitis vinifera]
Length = 640
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 175/434 (40%), Positives = 260/434 (59%), Gaps = 11/434 (2%)
Query: 237 VELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISA 296
++ + ++F+RI + + W TM+ Y+Q +AL +Y+ M+ + + P++ ++ A
Sbjct: 79 LDYSLQIFDRIENSNGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQA 138
Query: 297 CG-RAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIAS 355
C R + FG G +IH ++K GFD ++Q T+I+ YA CG + AR F+ S
Sbjct: 139 CAVRLLEFG-GKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVS 197
Query: 356 WNALIAGFIRNG---MIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVD 412
WN+++AG+++ G + +A +LFN M ++D+ SWSA+ISGY QN AL +F M
Sbjct: 198 WNSILAGYVKKGDMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNA 257
Query: 413 AGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAII----DMYAKCG 468
G++ +E+ +VSV A A +K G+ H V+ I NL A+I DMY KCG
Sbjct: 258 NGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSDMYMKCG 317
Query: 469 SINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGV 528
+ A EVF + ++ VS WNA+I GLA++G +L ++S+++ + N ITF+GV
Sbjct: 318 CVENALEVFNGMEEK--GVSSWNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFMGV 375
Query: 529 LSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKA 588
L C H GLVD G +F SM + +EP++KHYGCMVDLLGRAG L +AE++I SMPM
Sbjct: 376 LGACRHMGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIESMPMAP 435
Query: 589 DVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRK 648
DV WG LL A + HG+ E+GER + L LQP H VLLSNI+A G WED +R
Sbjct: 436 DVATWGALLGACKKHGDTEMGERVGRKLIELQPDHDGFHVLLSNIFASKGDWEDVLEVRG 495
Query: 649 EMRDCGMKRLPGFS 662
M+ G+ + PG S
Sbjct: 496 MMKQQGVVKTPGCS 509
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 115/417 (27%), Positives = 193/417 (46%), Gaps = 48/417 (11%)
Query: 105 LNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISS 164
L+ + ++FD+ + +M+ + Q++ +AL +++ M V P+ T V+ +
Sbjct: 79 LDYSLQIFDRIENSNGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQA 138
Query: 165 S----VHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERN 220
+ GG + +H V+K+ D V + L+NMY VC ++ +AR LFDE +
Sbjct: 139 CAVRLLEFGG----KEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLD 194
Query: 221 IVSWNVMLNGFAKAG---LVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRA 277
VSWN +L G+ K G V A +LF + KD+VSW +I GY Q EAL M+
Sbjct: 195 SVSWNSILAGYVKKGDMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIE 254
Query: 278 MLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYA---- 333
M +G+ ++V++V ++SAC G IH ++++ G + Y +Q +IH Y+
Sbjct: 255 MNANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSDMYM 314
Query: 334 ACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISG 393
CG + A F + ++SWNALI G NG++E
Sbjct: 315 KCGCVENALEVFNGMEEKGVSSWNALIIGLAVNGLVER---------------------- 352
Query: 394 YAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVL-NNSITL 452
+L++F M + GV PNEIT + V A G + EGR ++ + I
Sbjct: 353 ---------SLDMFSEMKNNGVIPNEITFMGVLGACRHMGLVDEGRCHFASMIEKHGIEP 403
Query: 453 NDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKI 509
N ++D+ + G +N A E V+ W A++ HGD + ++
Sbjct: 404 NVKHYGCMVDLLGRAGLLNEA-EKLIESMPMAPDVATWGALLGACKKHGDTEMGERV 459
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 100/362 (27%), Positives = 180/362 (49%), Gaps = 34/362 (9%)
Query: 14 KANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGL 73
K N+ +Y LV ++ C+ + G++IH + K G +S+ ++QN+LIN+YA CG
Sbjct: 122 KNNVGPDNYTYPLV--VQACAVRLLEFGGKEIHDHVLKVGFDSDVYVQNTLINMYAVCGN 179
Query: 74 ISQAKSMFDSCSTLDPVACNIMISGYIRNDRLN---DAREVFDKTPIKCCVSYTSMIMGF 130
+ A+ +FD LD V+ N +++GY++ + +A ++F++ K VS++++I G+
Sbjct: 180 MRDARKLFDESPVLDSVSWNSILAGYVKKGDMGQVMEAWKLFNEMDEKDMVSWSALISGY 239
Query: 131 AQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFV 190
QN + EAL +F +M G+ +EV + SV+S+ HL + +M+HGLVI++ I+ +V
Sbjct: 240 EQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYV 299
Query: 191 IISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSK 250
+ L++MY + + K G VE A E+F + K
Sbjct: 300 NLQNALIHMYS---------------------------DMYMKCGCVENALEVFNGMEEK 332
Query: 251 DVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEG-LQI 309
V SW +I G + +L M+ M +G+ PN++ + ++ AC EG
Sbjct: 333 GVSSWNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFMGVLGACRHMGLVDEGRCHF 392
Query: 310 HSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFE-LGIKDHIASWNALIAGFIRNGM 368
S+I K G + ++ G +N A E + + +A+W AL+ ++G
Sbjct: 393 ASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIESMPMAPDVATWGALLGACKKHGD 452
Query: 369 IE 370
E
Sbjct: 453 TE 454
>gi|108862806|gb|ABA99524.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 1176
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 203/639 (31%), Positives = 316/639 (49%), Gaps = 95/639 (14%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+ + S L C++ + +G Q+HS +FK+G+ S+ ++ SL++LY KCG + A +F+S
Sbjct: 245 VTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNS 304
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
+DR N V + M++ F Q + ++ E+F
Sbjct: 305 ------------------SDRTN-------------VVLWNLMLVAFGQINDLAKSFELF 333
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
M+ G+ PN+ T ++ + I +H L +K + + +S L++MY
Sbjct: 334 CQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMY--- 390
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYL 263
+K G +E AR + E + KDVVSW +MI GY+
Sbjct: 391 ----------------------------SKYGWLEKARRVLEMLKEKDVVSWTSMIAGYV 422
Query: 264 QVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDF 323
Q E +AL ++ M GI P+++ + IS C A +GLQIH+ I +G+
Sbjct: 423 QHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYS---- 478
Query: 324 IQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRD 383
++ WNAL+ + R G I +A F ++ +D
Sbjct: 479 ---------------------------GDVSIWNALVNLYARCGRIREAFSSFEEIEHKD 511
Query: 384 VYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHE 443
+W+ ++SG+AQ+ AL++F M +GVK N T VS A A+ +K+G+ H
Sbjct: 512 EITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHA 571
Query: 444 YVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDA 503
V+ + + A+I +Y KCGS A F + +R VS WN II + HG
Sbjct: 572 RVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERN-EVS-WNTIITSCSQHGRG 629
Query: 504 NLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGC 563
L ++ ++K IK N +TFIGVL+ C H GLV+ G YFKSM Y + P HY C
Sbjct: 630 LEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYAC 689
Query: 564 MVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSH 623
++D+ GRAGQL+ A++ I MP+ AD ++W TLL+A ++H N+EVGE AAK L L+P
Sbjct: 690 VIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLSACKVHKNIEVGEFAAKHLLELEPHD 749
Query: 624 GPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
S VLLSN YA +W + +RK MRD G+++ PG S
Sbjct: 750 SASYVLLSNAYAVTEKWANRDQVRKMMRDRGVRKEPGRS 788
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 112/428 (26%), Positives = 194/428 (45%), Gaps = 68/428 (15%)
Query: 177 LHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGL 236
+H + + + I+ L+++Y ++ AR +F+E+ R+ VSW ML+G+A+ GL
Sbjct: 64 IHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGL 123
Query: 237 VELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISA 296
E EAL +YR M G+ P ++ ++S+
Sbjct: 124 GE-------------------------------EALGLYRQMHRAGVVPTPYVLSSVLSS 152
Query: 297 CGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQF-ELGIKDHIAS 355
C +A F +G IH+ K GF F+ +I Y CG LA F ++ +D + +
Sbjct: 153 CTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTV-T 211
Query: 356 WNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGV 415
+N LI+G + G E ALE+F M +G+
Sbjct: 212 FNTLISGHAQCGHGEH-------------------------------ALEIFEEMQFSGL 240
Query: 416 KPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFE 475
P+ +T+ S+ A AS G L++G H Y+ I+ + + +++D+Y KCG + TA
Sbjct: 241 SPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETAL- 299
Query: 476 VFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHA 535
V ++ DR T+V WN ++ D + +++ ++ I+ N T+ +L TC
Sbjct: 300 VIFNSSDR-TNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCT 358
Query: 536 GLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGT 595
+DLGE+ S+ E D+ G ++D+ + G LE A V+ + K DVV W +
Sbjct: 359 REIDLGEQ-IHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEK-DVVSWTS 416
Query: 596 LLAASRIH 603
++A H
Sbjct: 417 MIAGYVQH 424
>gi|225446849|ref|XP_002279693.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic [Vitis vinifera]
gi|302143555|emb|CBI22116.3| unnamed protein product [Vitis vinifera]
Length = 533
Score = 332 bits (850), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 172/432 (39%), Positives = 264/432 (61%), Gaps = 3/432 (0%)
Query: 232 AKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAML-CDGIAPNDVMI 290
+ G + A +F +I S ++ SW T+I G+ Q A++++ ML + P+ +
Sbjct: 69 SPGGDINYAYLVFTQIHSPNLFSWNTIIRGFSQSSTPHHAISLFIDMLIVSSVQPHRLTY 128
Query: 291 VDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIK 350
+ A + G Q+H ++K G FI+ TII+ YA CG ++ F +
Sbjct: 129 PSVFKAYAQLGLAHYGAQLHGRVIKLGLQFDPFIRNTIIYMYANCGFLSEMWKAFYERMD 188
Query: 351 DHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGM 410
I +WN++I G + G ++++R+LF+ M R+ SW++MISGY +N + AL+LF M
Sbjct: 189 FDIVAWNSMIMGLAKCGEVDESRKLFDEMPLRNTVSWNSMISGYVRNGRLREALDLFGQM 248
Query: 411 VDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSI 470
+ +KP+E TMVS+ A A G LK+G W H+Y+ N+ LN ++A+IIDMY KCGSI
Sbjct: 249 QEERIKPSEFTMVSLLNASARLGALKQGEWIHDYIRKNNFELNVIVTASIIDMYCKCGSI 308
Query: 471 NTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLS 530
AF+VF + +S WN +I GLAM+G N ++++S LE N++ + +TF+GVL+
Sbjct: 309 GEAFQVFEMAPLK--GLSSWNTMILGLAMNGCENEAIQLFSRLECSNLRPDDVTFVGVLT 366
Query: 531 TCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADV 590
C ++GLVD + YF M Y +EP +KHY CMVD LGRAG LE+AEE+IR+MP+ D
Sbjct: 367 ACNYSGLVDKAKEYFSLMSKTYKIEPSIKHYSCMVDTLGRAGLLEEAEELIRNMPVNPDA 426
Query: 591 VIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEM 650
+IW +LL+A R HGNVE+ +RAAK + L + VLLSNIYA + ++E+A R M
Sbjct: 427 IIWSSLLSACRKHGNVELAKRAAKHIVDLDGNDSCGYVLLSNIYAASDQFEEAMEQRLSM 486
Query: 651 RDCGMKRLPGFS 662
++ +++ PG S
Sbjct: 487 KEKQIEKEPGCS 498
Score = 165 bits (418), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 118/410 (28%), Positives = 195/410 (47%), Gaps = 48/410 (11%)
Query: 105 LNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILG-VIPNEVTLASVIS 163
+N A VF + S+ ++I GF+Q+ A+ +F DM I+ V P+ +T SV
Sbjct: 74 INYAYLVFTQIHSPNLFSWNTIIRGFSQSSTPHHAISLFIDMLIVSSVQPHRLTYPSVFK 133
Query: 164 SSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVS 223
+ LG LHG VIKL + I ++ MY C L E F E + +IV+
Sbjct: 134 AYAQLGLAHYGAQLHGRVIKLGLQFDPFIRNTIIYMYANCGFLSEMWKAFYERMDFDIVA 193
Query: 224 WNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGI 283
WN M+ G AK G V+ +R+LF+ +P ++ VSW +MI GY++ RL EAL ++ M + I
Sbjct: 194 WNSMIMGLAKCGEVDESRKLFDEMPLRNTVSWNSMISGYVRNGRLREALDLFGQMQEERI 253
Query: 284 APNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARL 343
P++ +V L++A R A +G IH I K F+ + A+II Y CG I A
Sbjct: 254 KPSEFTMVSLLNASARLGALKQGEWIHDYIRKNNFELNVIVTASIIDMYCKCGSIGEAFQ 313
Query: 344 QFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMA 403
FE+ ++SWN +I G NG +A QLF+ ++
Sbjct: 314 VFEMAPLKGLSSWNTMILGLAMNGCENEAIQLFSRLEC---------------------- 351
Query: 404 LELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEY--VLNNSITLNDNLS--AA 459
+ ++P+++T V V A SG + + A EY +++ + + ++ +
Sbjct: 352 ---------SNLRPDDVTFVGVLTACNYSGLVDK---AKEYFSLMSKTYKIEPSIKHYSC 399
Query: 460 IIDMYAKCGSINTAFEVFYHIRDRTTSVSP----WNAIICGLAMHGDANL 505
++D + G + A E+ R V+P W++++ HG+ L
Sbjct: 400 MVDTLGRAGLLEEAEELI-----RNMPVNPDAIIWSSLLSACRKHGNVEL 444
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 97/371 (26%), Positives = 172/371 (46%), Gaps = 68/371 (18%)
Query: 30 LRYCSAHIAVSQ------GQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
L Y S A +Q G Q+H + K GL+ + FI+N++I +YA CG +S+ F
Sbjct: 126 LTYPSVFKAYAQLGLAHYGAQLHGRVIKLGLQFDPFIRNTIIYMYANCGFLSEMWKAFYE 185
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
D VA N MI G + ++++R++FD+ P++ VS+ SMI G+ +N REAL++F
Sbjct: 186 RMDFDIVAWNSMIMGLAKCGEVDESRKLFDEMPLRNTVSWNSMISGYVRNGRLREALDLF 245
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
M+ + P+E T+ S++++S LG + + +H + K + VI++ ++++MYC C
Sbjct: 246 GQMQEERIKPSEFTMVSLLNASARLGALKQGEWIHDYIRKNNFELNVIVTASIIDMYCKC 305
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYL 263
S+ EA +F+ + + SWN M+ G A G A +LF R+
Sbjct: 306 GSIGEAFQVFEMAPLKGLSSWNTMILGLAMNGCENEAIQLFSRLE--------------- 350
Query: 264 QVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDF 323
C + P+DV V +++AC + + + S++ K
Sbjct: 351 ----------------CSNLRPDDVTFVGVLTACNYSGLVDKAKEYFSLMSKT------- 387
Query: 324 IQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ-KR 382
I+ I ++ ++ R G++E+A +L NM
Sbjct: 388 -----------------------YKIEPSIKHYSCMVDTLGRAGLLEEAEELIRNMPVNP 424
Query: 383 DVYSWSAMISG 393
D WS+++S
Sbjct: 425 DAIIWSSLLSA 435
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 106/237 (44%), Gaps = 45/237 (18%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E +VS L + A+ QG+ IH I K+ E N + S+I++Y KCG I +A
Sbjct: 257 EFTMVSLLNASARLGALKQGEWIHDYIRKNNFELNVIVTASIIDMYCKCGSIGEA----- 311
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+VF+ P+K S+ +MI+G A N C EA+++
Sbjct: 312 --------------------------FQVFEMAPLKGLSSWNTMILGLAMNGCENEAIQL 345
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
F + + P++VT V+++ + G + + + L+ K I ++ + C+
Sbjct: 346 FSRLECSNLRPDDVTFVGVLTACNYSGLVDKAKEYFSLMSKT-----YKIEPSIKHYSCM 400
Query: 203 CSSLVEARSLFDEMKE--RNI------VSWNVMLNGFAKAGLVELARELFERIPSKD 251
+L A L +E +E RN+ + W+ +L+ K G VELA+ + I D
Sbjct: 401 VDTLGRA-GLLEEAEELIRNMPVNPDAIIWSSLLSACRKHGNVELAKRAAKHIVDLD 456
>gi|359497527|ref|XP_003635554.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g22760-like [Vitis vinifera]
gi|296083555|emb|CBI23551.3| unnamed protein product [Vitis vinifera]
Length = 580
Score = 332 bits (850), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 193/550 (35%), Positives = 305/550 (55%), Gaps = 55/550 (10%)
Query: 122 SYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISS----SVHLGGIWECRML 177
S+ I Q+ ++EA ++ M+ G+ P L+S + + + +GG+ +
Sbjct: 72 SWACAIRFSTQHGQFKEAFALYVQMQRWGLWPTTFALSSALKACARIAYRMGGL----SI 127
Query: 178 HGLVIKLMIDGF---VIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKA 234
HG V K G + + T L++ YC + AR +FDEM ERN+VSWN ML G+ K+
Sbjct: 128 HGQVQKFGFSGGGDGIYVETALVDFYCKLGDMEIARKMFDEMAERNVVSWNSMLAGYLKS 187
Query: 235 GLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLI 294
G + +A+ +F+ IP KDV+SW +MI GY + + +AL++++ M A + MI
Sbjct: 188 GDLVVAQRVFDEIPQKDVISWNSMISGYARAGDMEKALSLFQQMPERNFASWNAMISG-- 245
Query: 295 SACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIA 354
Y G I+ AR F+ + +
Sbjct: 246 -------------------------------------YVEFGDIDSARSFFDAMPQRNNV 268
Query: 355 SWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMV--D 412
SW +I+G+ + G ++ A +LF+ + +D+ ++AMI+ YAQN +P AL+LF+ M+ D
Sbjct: 269 SWMTMISGYSKCGDVDSACELFDQVGGKDLLLFNAMIACYAQNSRPKEALKLFNNMLNPD 328
Query: 413 AGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINT 472
V+P+E+T+ SV A + G L+ G W Y+ I ++ +L+ A++D+YAKCGSI+
Sbjct: 329 VNVQPDEMTLASVISACSQLGDLRFGPWIESYMRRLGIEMDGHLATALLDLYAKCGSIDK 388
Query: 473 AFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTC 532
A+E+F+ +R + + + A+I G ++G A +K++ ++ I NSITFIG+L+
Sbjct: 389 AYELFHGLRKK--DLVAYTAMILGCGINGKAIDAIKLFDEMVDAQIFPNSITFIGLLTAY 446
Query: 533 CHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVI 592
HAGLV+ G F SMK YN+ P + HYG MVDL GRAG+L++A E+I+SMPM+ +
Sbjct: 447 NHAGLVEEGYHCFTSMKK-YNLVPSVDHYGIMVDLFGRAGRLQEALELIKSMPMQPHAGV 505
Query: 593 WGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRD 652
WG LL A R+H NVE GE AA+ L+P LLSNIYA RW+D +RK ++
Sbjct: 506 WGALLLACRLHNNVEFGEIAAQHCFELEPDTTGYCSLLSNIYASGERWDDVKRLRKVTKE 565
Query: 653 CGMKRLPGFS 662
G ++PG S
Sbjct: 566 KGFSKIPGCS 575
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 129/491 (26%), Positives = 224/491 (45%), Gaps = 84/491 (17%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFK---SGLESNTFIQNSLINLYAKCGLISQAKSM 80
AL SAL+ C+ G IH + K SG +++ +L++ Y K G + A+ M
Sbjct: 106 FALSSALKACARIAYRMGGLSIHGQVQKFGFSGGGDGIYVETALVDFYCKLGDMEIARKM 165
Query: 81 FDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREAL 140
FD + + V+ N M++GY+++ L A+ VFD+ P K +S+ SMI G+A+ +AL
Sbjct: 166 FDEMAERNVVSWNSMLAGYLKSGDLVVAQRVFDEIPQKDVISWNSMISGYARAGDMEKAL 225
Query: 141 EVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMY 200
+F+ M E AS W MI G+V
Sbjct: 226 SLFQQM-------PERNFAS-----------WNA----------MISGYVEF-------- 249
Query: 201 CVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMID 260
+ ARS FD M +RN VSW M++G++K G V+ A ELF+++ KD++ + MI
Sbjct: 250 ---GDIDSARSFFDAMPQRNNVSWMTMISGYSKCGDVDSACELFDQVGGKDLLLFNAMIA 306
Query: 261 GYLQVERLSEALTMYRAMLCD--GIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGF 318
Y Q R EAL ++ ML + P+++ + +ISAC + G I S + + G
Sbjct: 307 CYAQNSRPKEALKLFNNMLNPDVNVQPDEMTLASVISACSQLGDLRFGPWIESYMRRLGI 366
Query: 319 DCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNN 378
+ + ++ YA CG I+ A +LF+
Sbjct: 367 EMDGHLATALLDLYAKCGS-------------------------------IDKAYELFHG 395
Query: 379 MQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG 438
++K+D+ +++AMI G N + A++LF MVDA + PN IT + + A +G ++EG
Sbjct: 396 LRKKDLVAYTAMILGCGINGKAIDAIKLFDEMVDAQIFPNSITFIGLLTAYNHAGLVEEG 455
Query: 439 RWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSP----WNAII 494
+ ++ + + ++D++ + G + A E+ ++ + P W A++
Sbjct: 456 YHCFTSMKKYNLVPSVDHYGIMVDLFGRAGRLQEALELI-----KSMPMQPHAGVWGALL 510
Query: 495 CGLAMHGDANL 505
+H +
Sbjct: 511 LACRLHNNVEF 521
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 91/378 (24%), Positives = 177/378 (46%), Gaps = 19/378 (5%)
Query: 234 AGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDL 293
A + + + S D SW I Q + EA +Y M G+ P +
Sbjct: 52 ATVAQYVHSVLHHSKSPDSFSWACAIRFSTQHGQFKEAFALYVQMQRWGLWPTTFALSSA 111
Query: 294 ISACGRAMAFGEGLQIHSIIVKAGFDCYD---FIQATIIHFYAACGRINLARLQFELGIK 350
+ AC R GL IH + K GF +++ ++ FY G + +AR F+ +
Sbjct: 112 LKACARIAYRMGGLSIHGQVQKFGFSGGGDGIYVETALVDFYCKLGDMEIARKMFDEMAE 171
Query: 351 DHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGM 410
++ SWN+++AG++++G + A+++F+ + ++DV SW++MISGYA+ AL LF M
Sbjct: 172 RNVVSWNSMLAGYLKSGDLVVAQRVFDEIPQKDVISWNSMISGYARAGDMEKALSLFQQM 231
Query: 411 VDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLS-AAIIDMYAKCGS 469
+ N + ++ G + R +++ +N+S +I Y+KCG
Sbjct: 232 PER----NFASWNAMISGYVEFGDIDSAR-----SFFDAMPQRNNVSWMTMISGYSKCGD 282
Query: 470 INTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDL--EKRNIKLNSITFIG 527
+++A E+F + + + +NA+I A + LK+++++ N++ + +T
Sbjct: 283 VDSACELFDQVGGKDLLL--FNAMIACYAQNSRPKEALKLFNNMLNPDVNVQPDEMTLAS 340
Query: 528 VLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMK 587
V+S C G + G + +S +E D ++DL + G ++ A E+ + K
Sbjct: 341 VISACSQLGDLRFGP-WIESYMRRLGIEMDGHLATALLDLYAKCGSIDKAYELFHGL-RK 398
Query: 588 ADVVIWGTLLAASRIHGN 605
D+V + ++ I+G
Sbjct: 399 KDLVAYTAMILGCGINGK 416
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 96/242 (39%), Gaps = 71/242 (29%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E+ L S + CS + G I S + + G+E + + +L++LYAKCG I +A +F
Sbjct: 335 EMTLASVISACSQLGDLRFGPWIESYMRRLGIEMDGHLATALLDLYAKCGSIDKAYELFH 394
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
D VA MI G N + DA ++FD
Sbjct: 395 GLRKKDLVAYTAMILGCGINGKAIDAIKLFD----------------------------- 425
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
+M + PN +T ++++ H G L+ +G+ +C
Sbjct: 426 --EMVDAQIFPNSITFIGLLTAYNHAG--------------LVEEGY----------HC- 458
Query: 203 CSSLVEARSLFDEMKERNIVS----WNVMLNGFAKAGLVELARELFERIPSKDVVS-WGT 257
F MK+ N+V + +M++ F +AG ++ A EL + +P + WG
Sbjct: 459 ----------FTSMKKYNLVPSVDHYGIMVDLFGRAGRLQEALELIKSMPMQPHAGVWGA 508
Query: 258 MI 259
++
Sbjct: 509 LL 510
>gi|34393605|dbj|BAC83258.1| pentatricopeptide (PPR) repeat-containing protein-like protein
[Oryza sativa Japonica Group]
gi|50509373|dbj|BAD30928.1| pentatricopeptide (PPR) repeat-containing protein-like protein
[Oryza sativa Japonica Group]
Length = 808
Score = 331 bits (849), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 196/634 (30%), Positives = 333/634 (52%), Gaps = 19/634 (2%)
Query: 45 IHSLIFKSGL---ESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIR 101
+H+ + + L S+ + LI+LY ++ ++F S PVA +++ +
Sbjct: 47 LHARLLTADLLHAPSHPHLTLRLIHLYTLSPDLATPAALFRSDPDPGPVAATSLVAAHAA 106
Query: 102 NDRLNDAREVFDKTPI--KCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVI-PNEVTL 158
RL DA FD P + V + +M+ FA+ A+ VF + G + P++ +
Sbjct: 107 AGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSVFHALLGSGSLRPDDYSF 166
Query: 159 ASVISS--SVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLV---EARSLF 213
++IS+ +H C LH V+K + +S L+ +Y C + +AR +
Sbjct: 167 TALISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLSVSNALIALYMKCDTPEASWDARKVL 226
Query: 214 DEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALT 273
DEM +++ ++W M+ G+ + G V AR +FE + K V W MI GY+Q ++A
Sbjct: 227 DEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQSGMCADAFE 286
Query: 274 MYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD----FIQATII 329
++R M+ + + ++ ++SAC A F G +H I++ + + ++
Sbjct: 287 LFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALV 346
Query: 330 HFYAACGRINLARLQFE-LGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWS 388
Y+ G+I +A+ F+ + +KD + SWN +++G+I +G ++ A ++F M ++ SW
Sbjct: 347 TLYSKGGKIVIAKRIFDTMNLKD-VVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWM 405
Query: 389 AMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNN 448
M+SGY AL+LF+ M VKP + T A G LK GR H +++
Sbjct: 406 VMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQC 465
Query: 449 SITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLK 508
+++ A++ MYAKCG++N A VF + SVS WNA+I L HG L+
Sbjct: 466 GFEASNSAGNALLTMYAKCGAVNDARLVFL-VMPNLDSVS-WNAMISALGQHGHGREALE 523
Query: 509 IYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLL 568
++ + I + I+F+ +L+ C HAGLVD G YF+SMK + + P HY ++DLL
Sbjct: 524 LFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFHYFESMKRDFGISPGEDHYARLIDLL 583
Query: 569 GRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRV 628
GR+G++ +A ++I++MP + IW +L+ R +G++E G AA L + P H + +
Sbjct: 584 GRSGRIGEARDLIKTMPFEPTPSIWEAILSGCRTNGDMEFGAYAADQLFRMIPQHDGTYI 643
Query: 629 LLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
LLSN Y+ AGRW DA +RK MRD G+K+ PG S
Sbjct: 644 LLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCS 677
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 150/540 (27%), Positives = 258/540 (47%), Gaps = 45/540 (8%)
Query: 6 FHSVFNSQKANLQNSDYEL-ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSL 64
FH++ S +L+ DY AL+SA+ ++A Q+H + KSG + + N+L
Sbjct: 150 FHALLGS--GSLRPDDYSFTALISAVGQMH-NLAAPHCTQLHCSVLKSGAAAVLSVSNAL 206
Query: 65 INLYAKCGLIS---QAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCV 121
I LY KC A+ + D D + M+ GY+R +N AR VF++ K V
Sbjct: 207 IALYMKCDTPEASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDV 266
Query: 122 SYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLV 181
+ +MI G+ Q+ +A E+FR M V +E T SV+S+ + G + +HG +
Sbjct: 267 VWNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQI 326
Query: 182 IKL----MIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLV 237
I+L + + + ++ L+ +Y +V A+ +FD M +++VSWN +L+G+ +G +
Sbjct: 327 IRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCL 386
Query: 238 ELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISAC 297
+ A E+F+ +P K+ +SW M+ GY+ +AL ++ M + + P D I+AC
Sbjct: 387 DKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAAC 446
Query: 298 GRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWN 357
G A G Q+H+ +V+ GF+ + ++ YA CG +N ARL F + SWN
Sbjct: 447 GELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWN 506
Query: 358 ALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKP 417
A+I+ ++G + ALELF MV G+ P
Sbjct: 507 AMISALGQHGHGRE-------------------------------ALELFDQMVAEGIDP 535
Query: 418 NEITMVSVFCAIASSGTLKEGRWAHEYVLNN-SITLNDNLSAAIIDMYAKCGSINTAFEV 476
+ I+ +++ A +G + EG E + + I+ ++ A +ID+ + G I A ++
Sbjct: 536 DRISFLTILTACNHAGLVDEGFHYFESMKRDFGISPGEDHYARLIDLLGRSGRIGEARDL 595
Query: 477 FYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAG 536
+ T S W AI+ G +GD +D R I + T+I + +T AG
Sbjct: 596 IKTMPFEPTP-SIWEAILSGCRTNGDMEFG-AYAADQLFRMIPQHDGTYILLSNTYSAAG 653
>gi|328774757|gb|AEB39778.1| pentatricopeptide repeat protein 77 [Funaria hygrometrica]
Length = 1161
Score = 331 bits (849), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 203/639 (31%), Positives = 323/639 (50%), Gaps = 98/639 (15%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
L L+SA C+ A S G+ IH I +SG++SN + N+L+N+Y +CG I +A++
Sbjct: 490 LHLLSA---CTNSSAYSDGKMIHEDILRSGIKSNGHLANALMNMYRRCGSIMEAQN---- 542
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
VF+ T + +S+ SMI G AQ+ + A ++F
Sbjct: 543 ---------------------------VFEGTRARDIISWNSMIAGHAQHGSYEAAYKLF 575
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
+M+ G+ P+++T ASV+ + + R +H L+I+ + V + L+NMY C
Sbjct: 576 LEMKKEGLEPDKITFASVLVGCKNPEALELGRQIHMLIIESGLQLDVNLGNALINMYIRC 635
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYL 263
SL +A E+F + ++V+SW MI G+
Sbjct: 636 GSLQDAY-------------------------------EVFHSLRHRNVMSWTAMIGGFA 664
Query: 264 QVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDF 323
+A ++ M DG P ++ AC + EG ++ + I+ +G+
Sbjct: 665 DQGEDRKAFELFWQMQNDGFKPVKSTFSSILKACMSSACLDEGKKVIAHILNSGY----- 719
Query: 324 IQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRD 383
+ + G+ NALI+ + ++G + DAR++F+ M RD
Sbjct: 720 --------------------ELDTGVG------NALISAYSKSGSMTDARKVFDKMPNRD 753
Query: 384 VYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHE 443
+ SW+ MI+GYAQN AL+ + M + GV N+ + VS+ A +S L+EG+ H
Sbjct: 754 IMSWNKMIAGYAQNGLGGTALQFAYQMQEQGVVLNKFSFVSILNACSSFSALEEGKRVHA 813
Query: 444 YVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDA 503
++ + + + AA+I MYAKCGS+ A EVF + ++ +V WNA+I A HG A
Sbjct: 814 EIVKRKMQGDVRVGAALISMYAKCGSLEEAQEVFDNFTEK--NVVTWNAMINAYAQHGLA 871
Query: 504 NLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGC 563
+ L ++ ++K IK + TF +LS C H+GLV G R F S++S + + P ++HYGC
Sbjct: 872 SKALDFFNCMDKEGIKPDGSTFTSILSACNHSGLVMEGNRIFSSLESQHGLSPTIEHYGC 931
Query: 564 MVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSH 623
+V LLGRAG+ ++AE +I MP D +W TLL A RIHGNV + E AA + L +
Sbjct: 932 LVGLLGRAGRFQEAETLINQMPFPPDAAVWETLLGACRIHGNVALAEHAANNALKLNARN 991
Query: 624 GPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
VLLSN+YA AGRW+D IR+ M G+++ PG S
Sbjct: 992 PAVYVLLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRS 1030
Score = 208 bits (530), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 139/567 (24%), Positives = 253/567 (44%), Gaps = 99/567 (17%)
Query: 39 VSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISG 98
+ +G++IH L GL S+ + +L ++ +CG ++ AK ++ + D
Sbjct: 300 LDEGKRIHKLAVNEGLNSDIRVGTALATMFVRCGDVAGAKQALEAFADRD---------- 349
Query: 99 YIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTL 158
V Y ++I AQ+ + EA E + MR GV+ N T
Sbjct: 350 ---------------------VVVYNALIAALAQHGHYEEAFEQYYQMRSDGVVMNRTTY 388
Query: 159 ASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKE 218
SV+++ + ++H + ++ V I +L++MY C L AR LF+ M +
Sbjct: 389 LSVLNACSTSKALGAGELIHSHISEVGHSSDVQIGNSLISMYARCGDLPRARELFNTMPK 448
Query: 219 RNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAM 278
R+++SWN ++ G+A+ E EA+ +Y+ M
Sbjct: 449 RDLISWNAIIAGYARR-------------------------------EDRGEAMKLYKQM 477
Query: 279 LCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRI 338
+G+ P V + L+SAC + A+ +G IH I+++G + +++ Y CG I
Sbjct: 478 QSEGVKPGRVTFLHLLSACTNSSAYSDGKMIHEDILRSGIKSNGHLANALMNMYRRCGSI 537
Query: 339 NLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNE 398
A+ FE I SWN++IAG ++G E A +LF M+K
Sbjct: 538 MEAQNVFEGTRARDIISWNSMIAGHAQHGSYEAAYKLFLEMKKE---------------- 581
Query: 399 QPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSA 458
G++P++IT SV + L+ GR H ++ + + L+ NL
Sbjct: 582 ---------------GLEPDKITFASVLVGCKNPEALELGRQIHMLIIESGLQLDVNLGN 626
Query: 459 AIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNI 518
A+I+MY +CGS+ A+EVF+ +R R +V W A+I G A G+ +++ ++
Sbjct: 627 ALINMYIRCGSLQDAYEVFHSLRHR--NVMSWTAMIGGFADQGEDRKAFELFWQMQNDGF 684
Query: 519 KLNSITFIGVLSTCCHAGLVDLGERYFKS-MKSVYNVEPDLKHYGCMVDLLGRAGQLEDA 577
K TF +L C + +D G++ + S Y ++ + + ++ ++G + DA
Sbjct: 685 KPVKSTFSSILKACMSSACLDEGKKVIAHILNSGYELDTGVGN--ALISAYSKSGSMTDA 742
Query: 578 EEVIRSMPMKADVVIWGTLLAASRIHG 604
+V MP + D++ W ++A +G
Sbjct: 743 RKVFDKMPNR-DIMSWNKMIAGYAQNG 768
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 144/577 (24%), Positives = 252/577 (43%), Gaps = 97/577 (16%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
++ +S L C + + G++IHS I ++G + + +QNSL+N+Y KC + A+ +F
Sbjct: 183 KITYISILTACCSPAELEYGKKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVF- 241
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
SG R D VSY +M+ +AQ E + +
Sbjct: 242 --------------SGIYRRD----------------VVSYNTMLGLYAQKAYVEECIGL 271
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
F M G+ P++VT +++ + + E + +H L + ++ + + T L M+
Sbjct: 272 FGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKRIHKLAVNEGLNSDIRVGTALATMFVR 331
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
C + A+ + +R++V +N ++ A+ G E
Sbjct: 332 CGDVAGAKQALEAFADRDVVVYNALIAALAQHGHYE------------------------ 367
Query: 263 LQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD 322
EA Y M DG+ N + +++AC + A G G IHS I + G
Sbjct: 368 -------EAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEVGHSSDV 420
Query: 323 FIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKR 382
I ++I YA CG + AR F K + SWNA+IAG+
Sbjct: 421 QIGNSLISMYARCGDLPRARELFNTMPKRDLISWNAIIAGY------------------- 461
Query: 383 DVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAH 442
A+ E A++L+ M GVKP +T + + A +S +G+ H
Sbjct: 462 ------------ARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSACTNSSAYSDGKMIH 509
Query: 443 EYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGD 502
E +L + I N +L+ A+++MY +CGSI A VF R R + WN++I G A HG
Sbjct: 510 EDILRSGIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRAR--DIISWNSMIAGHAQHGS 567
Query: 503 ANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYG 562
K++ +++K ++ + ITF VL C + ++LG R + ++ D+
Sbjct: 568 YEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEALELG-RQIHMLIIESGLQLDVNLGN 626
Query: 563 CMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAA 599
++++ R G L+DA EV S+ + +V+ W ++
Sbjct: 627 ALINMYIRCGSLQDAYEVFHSLRHR-NVMSWTAMIGG 662
Score = 155 bits (393), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 97/399 (24%), Positives = 183/399 (45%), Gaps = 39/399 (9%)
Query: 205 SLVEARSLFDEMKE----RNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMID 260
SL EA+ + +M E +I N+++N + K V A ++F ++P +DV+SW ++I
Sbjct: 97 SLAEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVSDAHQVFLKMPRRDVISWNSLIS 156
Query: 261 GYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDC 320
Y Q +A ++ M G P+ + + +++AC G +IHS I++AG+
Sbjct: 157 CYAQQGFKKKAFQLFEEMQTAGFIPSKITYISILTACCSPAELEYGKKIHSKIIEAGYQR 216
Query: 321 YDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ 380
+Q ++++ Y C + AR Q+F+ +
Sbjct: 217 DPRVQNSLLNMYGKCEDLPSAR-------------------------------QVFSGIY 245
Query: 381 KRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRW 440
+RDV S++ M+ YAQ + LF M G+ P+++T +++ A + L EG+
Sbjct: 246 RRDVVSYNTMLGLYAQKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKR 305
Query: 441 AHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMH 500
H+ +N + + + A+ M+ +CG + A + DR V +NA+I LA H
Sbjct: 306 IHKLAVNEGLNSDIRVGTALATMFVRCGDVAGAKQALEAFADRDVVV--YNALIAALAQH 363
Query: 501 GDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKH 560
G + Y + + +N T++ VL+ C + + GE + V + D++
Sbjct: 364 GHYEEAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEVGH-SSDVQI 422
Query: 561 YGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAA 599
++ + R G L A E+ +MP K D++ W ++A
Sbjct: 423 GNSLISMYARCGDLPRARELFNTMP-KRDLISWNAIIAG 460
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 106/416 (25%), Positives = 173/416 (41%), Gaps = 93/416 (22%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
++ S L C A+ G+QIH LI +SGL+ + + N+LIN+Y +CG
Sbjct: 587 KITFASVLVGCKNPEALELGRQIHMLIIESGLQLDVNLGNALINMYIRCG---------- 636
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
L DA EVF + +S+T+MI GFA R+A E+
Sbjct: 637 ---------------------SLQDAYEVFHSLRHRNVMSWTAMIGGFADQGEDRKAFEL 675
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
F M+ G P + T +S++ + + + E + + ++ + + L++ Y
Sbjct: 676 FWQMQNDGFKPVKSTFSSILKACMSSACLDEGKKVIAHILNSGYELDTGVGNALISAYSK 735
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
S+ +AR +FD+M R+I+SWN M+ G+A+ GL GT
Sbjct: 736 SGSMTDARKVFDKMPNRDIMSWNKMIAGYAQNGL------------------GGT----- 772
Query: 263 LQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD 322
AL M G+ N V +++AC A EG ++H+ IVK
Sbjct: 773 --------ALQFAYQMQEQGVVLNKFSFVSILNACSSFSALEEGKRVHAEIVKRKMQGDV 824
Query: 323 FIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKR 382
+ A +I YA CG + A+ F+ + ++ +WNA+I + ++G+ A FN M K
Sbjct: 825 RVGAALISMYAKCGSLEEAQEVFDNFTEKNVVTWNAMINAYAQHGLASKALDFFNCMDKE 884
Query: 383 DVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG 438
G+KP+ T S+ A SG + EG
Sbjct: 885 -------------------------------GIKPDGSTFTSILSACNHSGLVMEG 909
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 88/359 (24%), Positives = 156/359 (43%), Gaps = 38/359 (10%)
Query: 249 SKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQ 308
S ++VS M D + R SE + A N VDL+ C R + E +
Sbjct: 47 SSNLVSVKVMRD---EQHRGSEREDLSNAYQPRPTETNRAAYVDLVQNCTRKRSLAEAKR 103
Query: 309 IHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGM 368
IH+ +V+AG F+ +I+ Y C ++
Sbjct: 104 IHAQMVEAGVGPDIFLSNLLINMYVKCRSVS----------------------------- 134
Query: 369 IEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCA 428
DA Q+F M +RDV SW+++IS YAQ A +LF M AG P++IT +S+ A
Sbjct: 135 --DAHQVFLKMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPSKITYISILTA 192
Query: 429 IASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVS 488
S L+ G+ H ++ + + ++++MY KC + +A +VF I R V
Sbjct: 193 CCSPAELEYGKKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSGIYRR--DVV 250
Query: 489 PWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSM 548
+N ++ A + ++ + I + +T+I +L ++D G+R K +
Sbjct: 251 SYNTMLGLYAQKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKRIHK-L 309
Query: 549 KSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVE 607
+ D++ + + R G + A++ + + + DVV++ L+AA HG+ E
Sbjct: 310 AVNEGLNSDIRVGTALATMFVRCGDVAGAKQALEAFADR-DVVVYNALIAALAQHGHYE 367
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 96/220 (43%), Gaps = 33/220 (15%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
+ + VS L CS+ A+ +G+++H+ I K ++ + + +LI++YAKCG + +A+ +FD
Sbjct: 789 KFSFVSILNACSSFSALEEGKRVHAEIVKRKMQGDVRVGAALISMYAKCGSLEEAQEVFD 848
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+ + + V N MI+ Y AQ+ +AL+
Sbjct: 849 NFTEKNVVTWNAMINAY-------------------------------AQHGLASKALDF 877
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWEC-RMLHGLVIKLMIDGFVIISTNLLNMYC 201
F M G+ P+ T S++S+ H G + E R+ L + + + L+ +
Sbjct: 878 FNCMDKEGIKPDGSTFTSILSACNHSGLVMEGNRIFSSLESQHGLSPTIEHYGCLVGLLG 937
Query: 202 VCSSLVEARSLFDEMK-ERNIVSWNVMLNGFAKAGLVELA 240
EA +L ++M + W +L G V LA
Sbjct: 938 RAGRFQEAETLINQMPFPPDAAVWETLLGACRIHGNVALA 977
>gi|357453021|ref|XP_003596787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355485835|gb|AES67038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 867
Score = 331 bits (849), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 202/629 (32%), Positives = 321/629 (51%), Gaps = 103/629 (16%)
Query: 39 VSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISG 98
V G Q+H+++ K G E + NSLI+LY++ G+
Sbjct: 210 VGIGLQVHAMVVKHGFEEAIPVFNSLISLYSRLGM------------------------- 244
Query: 99 YIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTL 158
L DAR+VFDK I+ V++ SMI G+ +N E E+F M++ GV P +T
Sbjct: 245 ------LRDARDVFDKMEIRDWVTWNSMIAGYVRNGQDLEVFEIFNKMQLAGVKPTHMTF 298
Query: 159 ASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKE 218
ASVI S L + +++ +K I+ T L+ C + +A SLF M+E
Sbjct: 299 ASVIKSCASLRELALVKLMQCKALKSGFTTDQIVITALMVALSKCKEMDDALSLFSLMEE 358
Query: 219 RNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAM 278
K+VVSW MI G LQ +A+ ++ M
Sbjct: 359 ------------------------------GKNVVSWTAMISGCLQNGGNDQAVNLFSQM 388
Query: 279 LCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRI 338
+G+ PN +S I+ + + + +A +
Sbjct: 389 RREGVKPNHF--------------------TYSAILTVHYPVF------VSEMHAEVIKT 422
Query: 339 NLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNE 398
N R + AL+ +++ G DA ++F ++ +D+ +WSAM++GYAQ
Sbjct: 423 NYERSS---------SVGTALLDAYVKLGNTIDAVKVFEIIEAKDLMAWSAMLAGYAQTG 473
Query: 399 QPNMALELFHGMVDAGVKPNEITMVSVFCAIAS-SGTLKEGRWAHEYVLNNSITLNDNL- 456
+ A +LFH ++ G+KPNE T SV A AS + ++G+ H Y + + LN+ L
Sbjct: 474 ETEEAAKLFHQLIKEGIKPNEFTFSSVINACASPTAAAEQGKQFHAYAIK--MRLNNALC 531
Query: 457 -SAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEK 515
S+A++ MYAK G+I++A EVF ++R + WN++I G + HG A L+++ +++K
Sbjct: 532 VSSALVTMYAKRGNIDSAHEVFKRQKER--DLVSWNSMISGYSQHGQAKKALEVFDEMQK 589
Query: 516 RNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLE 575
RN+ ++++TFIGV++ C HAGLV+ G++YF SM + +++ P +KHY CM+DL RAG LE
Sbjct: 590 RNMDVDAVTFIGVITACTHAGLVEKGQKYFNSMINDHHINPTMKHYSCMIDLYSRAGMLE 649
Query: 576 DAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYA 635
A +I MP +W TLL A+R+H NVE+GE AA+ L LQP + VLLSN+YA
Sbjct: 650 KAMGIINEMPFPPGATVWRTLLGAARVHRNVELGELAAEKLISLQPEDSAAYVLLSNMYA 709
Query: 636 DAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
AG W++ ++RK M +K+ PG+S +
Sbjct: 710 AAGNWQERTNVRKLMDKRKVKKEPGYSWI 738
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 126/525 (24%), Positives = 226/525 (43%), Gaps = 85/525 (16%)
Query: 108 AREVFDKTPIKCCV--SYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVI--- 162
A +FDK P + + ++ ++++ +EAL +F + + P+E TL+ V
Sbjct: 44 AHNLFDKIPHRPTTLKEHNQLLFSYSRDKQTKEALNLFVSLLHSSLQPDESTLSCVFNIC 103
Query: 163 --SSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERN 220
S LG R +H +K + V + T+L++MY ++ + R +FDEM ERN
Sbjct: 104 AGSLDGKLG-----RQVHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGERN 158
Query: 221 IVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLC 280
+VSW +L G++ GL ELF + M
Sbjct: 159 VVSWTSLLAGYSWNGLYGYVWELFCQ-------------------------------MQY 187
Query: 281 DGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINL 340
+G+ PN + +I+A G GLQ+H+++VK GF+ + ++I Y+ G +
Sbjct: 188 EGVLPNRYTVSTVIAALVNEGVVGIGLQVHAMVVKHGFEEAIPVFNSLISLYSRLGMLRD 247
Query: 341 ARLQFE-LGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQ 399
AR F+ + I+D + +WN++IAG++RNG + ++FN MQ
Sbjct: 248 ARDVFDKMEIRDWV-TWNSMIAGYVRNGQDLEVFEIFNKMQL------------------ 288
Query: 400 PNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAA 459
AGVKP +T SV + AS L + L + T + + A
Sbjct: 289 -------------AGVKPTHMTFASVIKSCASLRELALVKLMQCKALKSGFTTDQIVITA 335
Query: 460 IIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIK 519
++ +KC ++ A +F + + VS W A+I G +G + + ++S + + +K
Sbjct: 336 LMVALSKCKEMDDALSLFSLMEEGKNVVS-WTAMISGCLQNGGNDQAVNLFSQMRREGVK 394
Query: 520 LNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEE 579
N T+ +L+ + ++ K+ N E ++D + G DA +
Sbjct: 395 PNHFTYSAILTVHYPVFVSEMHAEVIKT-----NYERSSSVGTALLDAYVKLGNTIDAVK 449
Query: 580 VIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSL--AGLQPS 622
V + K D++ W +LA G E + L G++P+
Sbjct: 450 VFEIIEAK-DLMAWSAMLAGYAQTGETEEAAKLFHQLIKEGIKPN 493
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 88/405 (21%), Positives = 182/405 (44%), Gaps = 48/405 (11%)
Query: 239 LARELFERIPSKDVV--SWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISA 296
+A LF++IP + ++ Y + ++ EAL ++ ++L + P++ + + +
Sbjct: 43 IAHNLFDKIPHRPTTLKEHNQLLFSYSRDKQTKEALNLFVSLLHSSLQPDESTLSCVFNI 102
Query: 297 CGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASW 356
C ++ G Q+H VK G+ DH++
Sbjct: 103 CAGSLDGKLGRQVHCQCVK-------------------------------FGLVDHVSVG 131
Query: 357 NALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVK 416
+L+ +++ + D R++F+ M +R+V SW+++++GY+ N ELF M GV
Sbjct: 132 TSLVDMYMKTENVNDGRRVFDEMGERNVVSWTSLLAGYSWNGLYGYVWELFCQMQYEGVL 191
Query: 417 PNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEV 476
PN T+ +V A+ + G + G H V+ + + ++I +Y++ G + A +V
Sbjct: 192 PNRYTVSTVIAALVNEGVVGIGLQVHAMVVKHGFEEAIPVFNSLISLYSRLGMLRDARDV 251
Query: 477 F--YHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCC- 533
F IRD T WN++I G +G +I++ ++ +K +TF V+ +C
Sbjct: 252 FDKMEIRDWVT----WNSMIAGYVRNGQDLEVFEIFNKMQLAGVKPTHMTFASVIKSCAS 307
Query: 534 --HAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVV 591
LV L + K++KS + + + ++ L + +++DA + M +VV
Sbjct: 308 LRELALVKLMQ--CKALKSGFTTDQIV--ITALMVALSKCKEMDDALSLFSLMEEGKNVV 363
Query: 592 IWGTLLAASRIHG--NVEVGERAAKSLAGLQPSHGPSRVLLSNIY 634
W +++ +G + V + G++P+H +L+ Y
Sbjct: 364 SWTAMISGCLQNGGNDQAVNLFSQMRREGVKPNHFTYSAILTVHY 408
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 49/93 (52%), Gaps = 1/93 (1%)
Query: 23 ELALVSALRYCSAHIAVS-QGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMF 81
E S + C++ A + QG+Q H+ K L + + ++L+ +YAK G I A +F
Sbjct: 494 EFTFSSVINACASPTAAAEQGKQFHAYAIKMRLNNALCVSSALVTMYAKRGNIDSAHEVF 553
Query: 82 DSCSTLDPVACNIMISGYIRNDRLNDAREVFDK 114
D V+ N MISGY ++ + A EVFD+
Sbjct: 554 KRQKERDLVSWNSMISGYSQHGQAKKALEVFDE 586
>gi|449447637|ref|XP_004141574.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Cucumis sativus]
Length = 542
Score = 331 bits (849), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 176/469 (37%), Positives = 265/469 (56%), Gaps = 34/469 (7%)
Query: 226 VMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAP 285
+ ++ +G ++ A +LF +I D+ W TMI G Q + + A+++Y M G+ P
Sbjct: 52 IFVSAIVVSGTMDYAHQLFAQISQPDIFMWNTMIRGSAQTLKPATAVSLYTQMENRGVRP 111
Query: 286 NDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQF 345
+ ++ AC + G IH ++K+GF F++ T+I+F+A CG + AR F
Sbjct: 112 DKFTFSFVLKACTKLSWVKLGFGIHGKVLKSGFQSNTFVRNTLIYFHANCGDLATARALF 171
Query: 346 ELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ------------------------- 380
+ K + W+AL AG+ R G ++ ARQLF+ M
Sbjct: 172 DASAKREVVPWSALTAGYARRGKLDVARQLFDEMPMKDLVSWNVMITAYAKHGEMEKARK 231
Query: 381 ------KRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGT 434
K+DV +W+AMI+GY + ALE+F M D G +P+++TM+S+ A A G
Sbjct: 232 LFDEVPKKDVVTWNAMIAGYVLSRLNKEALEMFDAMRDLGQRPDDVTMLSILSASADLGD 291
Query: 435 LKEGRWAHEYVLNNSI-TLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAI 493
L+ G+ H + + L+ LS A+IDMYAKCGSI A EVF +R + TS WN+I
Sbjct: 292 LEIGKKIHRSIFDMCCGDLSVLLSNALIDMYAKCGSIGNALEVFQGMRKKDTS--SWNSI 349
Query: 494 ICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYN 553
I GLA+HG A ++ ++ ++ + +K N ITF+ VL C HAG V G YF MK+V+
Sbjct: 350 IGGLALHGHAEESINLFQEMLRLKMKPNEITFVAVLVACSHAGKVREGRMYFNLMKNVFK 409
Query: 554 VEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAA 613
+EP++KHYGCMVD+LGRAG L +A + I +M ++ + +IW TLL A R+HG+VE+G RA
Sbjct: 410 IEPNIKHYGCMVDILGRAGLLIEAFDFIDTMEIEPNAIIWRTLLGACRVHGDVELGRRAN 469
Query: 614 KSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
+ L ++ VLLSNIYA G W+ +RK M D G+K+ G S
Sbjct: 470 EQLLKMRKDESGDYVLLSNIYASQGEWDGVQKVRKLMDDGGVKKKVGHS 518
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 111/430 (25%), Positives = 198/430 (46%), Gaps = 80/430 (18%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTL-- 87
L+ C+ V G IH + KSG +SNTF++N+LI +A CG ++ A+++FD+ +
Sbjct: 120 LKACTKLSWVKLGFGIHGKVLKSGFQSNTFVRNTLIYFHANCGDLATARALFDASAKREV 179
Query: 88 -----------------------------DPVACNIMISGYIRNDRLNDAREVFDKTPIK 118
D V+ N+MI+ Y ++ + AR++FD+ P K
Sbjct: 180 VPWSALTAGYARRGKLDVARQLFDEMPMKDLVSWNVMITAYAKHGEMEKARKLFDEVPKK 239
Query: 119 CCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLH 178
V++ +MI G+ + +EALE+F MR LG P++VT+ S++S+S LG + + +H
Sbjct: 240 DVVTWNAMIAGYVLSRLNKEALEMFDAMRDLGQRPDDVTMLSILSASADLGDLEIGKKIH 299
Query: 179 GLVIKLMI-DGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLV 237
+ + D V++S L++MY C S+ A +F M++++ SWN ++ G A G
Sbjct: 300 RSIFDMCCGDLSVLLSNALIDMYAKCGSIGNALEVFQGMRKKDTSSWNSIIGGLALHGHA 359
Query: 238 ELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISAC 297
E E++ +++ ML + PN++ V ++ AC
Sbjct: 360 E-------------------------------ESINLFQEMLRLKMKPNEITFVAVLVAC 388
Query: 298 GRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHF---YAACGRINLARLQFE----LGIK 350
A EG +++ ++K F I+ I H+ GR L F+ + I+
Sbjct: 389 SHAGKVREG-RMYFNLMKNVFK----IEPNIKHYGCMVDILGRAGLLIEAFDFIDTMEIE 443
Query: 351 DHIASWNALIAGFIRNGMIEDAR----QLFNNMQKRDVYSWSAMISGYAQNEQPNMALEL 406
+ W L+ +G +E R QL M+K + + + + YA + + ++
Sbjct: 444 PNAIIWRTLLGACRVHGDVELGRRANEQLL-KMRKDESGDYVLLSNIYASQGEWDGVQKV 502
Query: 407 FHGMVDAGVK 416
M D GVK
Sbjct: 503 RKLMDDGGVK 512
>gi|297735486|emb|CBI17926.3| unnamed protein product [Vitis vinifera]
Length = 602
Score = 331 bits (849), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 171/438 (39%), Positives = 264/438 (60%), Gaps = 2/438 (0%)
Query: 227 MLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPN 286
+L + GLV R++F+ + +V W +I Y+ V +AL ++R M G+ P+
Sbjct: 132 LLGFYVACGLVGKGRQVFDEMRQPGLVLWTLIIRAYVCVTFPEKALELFRTMREVGLTPD 191
Query: 287 DVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFE 346
V I ++SACG G +H I K+G + F+ +T+I Y CG ++ A F+
Sbjct: 192 MVAISTVVSACGLLGDLGVAKAMHCFIEKSGIEVDAFVSSTLISTYGECGSLDYAYRFFQ 251
Query: 347 LGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALEL 406
+I WN +I + + +E +QLF +M RDV SW++MI G+A+ Q AL
Sbjct: 252 ETPMKNIVVWNTMIHQSVEHNNLELGKQLFQSMPDRDVVSWNSMIGGFARIGQYQEALTW 311
Query: 407 FHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAK 466
FH M +GV PN +T++S A AS G L G W H YV N + + +L +++IDMY+K
Sbjct: 312 FHEMEFSGVSPNALTLLSTLSACASHGALDTGAWIHAYVDKNDMNRDGSLDSSLIDMYSK 371
Query: 467 CGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFI 526
CG I+ A ++F R + W +I+CGLAMHG L +S +++ ++ + +T +
Sbjct: 372 CGDIDKAVQIFEESTRR--DLFTWTSIVCGLAMHGRGEKALHYFSKMKEAQVQPDDVTMV 429
Query: 527 GVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPM 586
GVLS C HAGL+D G YF+SM+ V+ + P ++HYGCMVDLLGR G L++A ++I MPM
Sbjct: 430 GVLSACAHAGLLDQGWWYFQSMEKVFGLVPKVEHYGCMVDLLGRMGCLKEAYDLIMGMPM 489
Query: 587 KADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSI 646
+A+ +IWG L+A R+H NVE+GE AA+ L GL P +RV+LSN+YA+ +W+ + +
Sbjct: 490 EANEIIWGAFLSACRVHNNVELGEVAARRLLGLDPRDPWARVMLSNMYAEEAKWDRSMGL 549
Query: 647 RKEMRDCGMKRLPGFSGV 664
RKE++ G+K+ PG S +
Sbjct: 550 RKEIKKKGLKKSPGCSSI 567
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 114/469 (24%), Positives = 217/469 (46%), Gaps = 66/469 (14%)
Query: 39 VSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISG 98
V +G+++H+ + ++G + F+ +L+ Y CGL+ + + +FD V ++I
Sbjct: 107 VKEGEEVHASVVRTGFACSEFVSGALLGFYVACGLVGKGRQVFDEMRQPGLVLWTLIIRA 166
Query: 99 YIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTL 158
Y+ CV++ +ALE+FR MR +G+ P+ V +
Sbjct: 167 YV-------------------CVTFP------------EKALELFRTMREVGLTPDMVAI 195
Query: 159 ASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKE 218
++V+S+ LG + + +H + K I+ +S+ L++ Y C SL A F E
Sbjct: 196 STVVSACGLLGDLGVAKAMHCFIEKSGIEVDAFVSSTLISTYGECGSLDYAYRFFQETPM 255
Query: 219 RNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAM 278
+NIV WN M++ + +EL ++LF+ +P +DVVSW +MI G+ ++ + EALT + M
Sbjct: 256 KNIVVWNTMIHQSVEHNNLELGKQLFQSMPDRDVVSWNSMIGGFARIGQYQEALTWFHEM 315
Query: 279 LCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRI 338
G++PN + ++ +SAC A G IH+ + K + + +++I Y+ CG I
Sbjct: 316 EFSGVSPNALTLLSTLSACASHGALDTGAWIHAYVDKNDMNRDGSLDSSLIDMYSKCGDI 375
Query: 339 NLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNE 398
+ A FE + + +W +++ G +G E A F+ M+
Sbjct: 376 DKAVQIFEESTRRDLFTWTSIVCGLAMHGRGEKALHYFSKMK------------------ 417
Query: 399 QPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLS- 457
+A V+P+++TMV V A A +G L +G W + + L +
Sbjct: 418 -------------EAQVQPDDVTMVGVLSACAHAGLLDQGWWYFQ-SMEKVFGLVPKVEH 463
Query: 458 -AAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANL 505
++D+ + G + A+++ + + W A + +H + L
Sbjct: 464 YGCMVDLLGRMGCLKEAYDLIMGMPMEANEII-WGAFLSACRVHNNVEL 511
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 87/411 (21%), Positives = 169/411 (41%), Gaps = 71/411 (17%)
Query: 246 RIPSKDVVSWGTMIDGYLQVERLSE--ALTMYRAMLCDGIAPNDVMIVDLISACGRAMAF 303
R+ +V W TMI ++ ++ L Y L G+ PN + L+ A
Sbjct: 48 RLDCANVFVWNTMIRKQVENGLITRDPPLLYYMQGLRAGLRPNGHTFMYLLKALVSGQEV 107
Query: 304 GEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGF 363
EG ++H+ +V+ GF C +F+ ++ FY AC
Sbjct: 108 KEGEEVHASVVRTGFACSEFVSGALLGFYVAC---------------------------- 139
Query: 364 IRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMV 423
G++ RQ+F+ M++ + W+ +I Y P ALELF M + G+ P+ + +
Sbjct: 140 ---GLVGKGRQVFDEMRQPGLVLWTLIIRAYVCVTFPEKALELFRTMREVGLTPDMVAIS 196
Query: 424 SVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAF--------- 474
+V A G L + H ++ + I ++ +S+ +I Y +CGS++ A+
Sbjct: 197 TVVSACGLLGDLGVAKAMHCFIEKSGIEVDAFVSSTLISTYGECGSLDYAYRFFQETPMK 256
Query: 475 ----------------------EVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSD 512
++F + DR V WN++I G A G L + +
Sbjct: 257 NIVVWNTMIHQSVEHNNLELGKQLFQSMPDR--DVVSWNSMIGGFARIGQYQEALTWFHE 314
Query: 513 LEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAG 572
+E + N++T + LS C G +D G + + ++ D ++D+ + G
Sbjct: 315 MEFSGVSPNALTLLSTLSACASHGALDTGA-WIHAYVDKNDMNRDGSLDSSLIDMYSKCG 373
Query: 573 QLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSH 623
++ A ++ + D+ W +++ +HG GE+A + ++ +
Sbjct: 374 DIDKAVQIFEE-STRRDLFTWTSIVCGLAMHGR---GEKALHYFSKMKEAQ 420
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 129/283 (45%), Gaps = 31/283 (10%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+A+ + + C + + +H I KSG+E + F+ ++LI+ Y +CG + A F
Sbjct: 193 VAISTVVSACGLLGDLGVAKAMHCFIEKSGIEVDAFVSSTLISTYGECGSLDYAYRFFQE 252
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
+ V N MI + ++ L +++F P + VS+ SMI GFA+ ++EAL F
Sbjct: 253 TPMKNIVVWNTMIHQSVEHNNLELGKQLFQSMPDRDVVSWNSMIGGFARIGQYQEALTWF 312
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
+M GV PN +TL S +S+ G + +H V K ++ + ++L++MY C
Sbjct: 313 HEMEFSGVSPNALTLLSTLSACASHGALDTGAWIHAYVDKNDMNRDGSLDSSLIDMYSKC 372
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYL 263
+ +A +F+E R++ +W ++ G A G E A F ++ V
Sbjct: 373 GDIDKAVQIFEESTRRDLFTWTSIVCGLAMHGRGEKALHYFSKMKEAQV----------- 421
Query: 264 QVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEG 306
P+DV +V ++SAC A +G
Sbjct: 422 --------------------QPDDVTMVGVLSACAHAGLLDQG 444
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 103/236 (43%), Gaps = 45/236 (19%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
L L+S L C++H A+ G IH+ + K+ + + + +SLI++Y+KCG I +A +F+
Sbjct: 325 LTLLSTLSACASHGALDTGAWIHAYVDKNDMNRDGSLDSSLIDMYSKCGDIDKAVQIFEE 384
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
+ R++F ++TS++ G A + +AL F
Sbjct: 385 STR----------------------RDLF---------TWTSIVCGLAMHGRGEKALHYF 413
Query: 144 RDMRILGVIPNEVTLASVISSSVHLG----GIWECRMLH---GLVIKLMIDGFVIISTNL 196
M+ V P++VT+ V+S+ H G G W + + GLV K ++ + + L
Sbjct: 414 SKMKEAQVQPDDVTMVGVLSACAHAGLLDQGWWYFQSMEKVFGLVPK--VEHYGCMVDLL 471
Query: 197 LNMYCVCSSLVEARSLFDEMK-ERNIVSWNVMLNGFAKAGLVELARELFERIPSKD 251
M C L EA L M E N + W L+ VEL R+ D
Sbjct: 472 GRMGC----LKEAYDLIMGMPMEANEIIWGAFLSACRVHNNVELGEVAARRLLGLD 523
>gi|297746342|emb|CBI16398.3| unnamed protein product [Vitis vinifera]
Length = 608
Score = 331 bits (848), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 182/512 (35%), Positives = 275/512 (53%), Gaps = 52/512 (10%)
Query: 191 IISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLV-----------EL 239
++S L++ C S+ + + + +M ++ +GFA + L+ +
Sbjct: 48 VLSNPFLSLLEKCKSISQLKQIQSQMVLTGLIE-----DGFASSRLIAFCAISEWRDLDY 102
Query: 240 ARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAML-CDGIAPNDVMIVDLISACG 298
+ + + SW I G+L E EA+ +Y+ +L CDG P++ L AC
Sbjct: 103 CTNILFNTRNPNTFSWNVAIRGFLDSENPREAVVLYKRVLQCDGTKPDNYTYPLLFKACA 162
Query: 299 RAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNA 358
R G +I ++ GFD F+ +IH +CG ++ AR F+ + SWN+
Sbjct: 163 RLSLIRMGSEILGHVLHLGFDSDIFVSNAVIHLLVSCGDLDGARKMFDKSCVRDLVSWNS 222
Query: 359 LIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGV--- 415
+I G+ N +E AR+LF++M + + SW+ M+ GYAQ+ +MA +LF M D V
Sbjct: 223 MINGYCGN--LESARKLFDSMTNKTMVSWTTMVVGYAQSGLLDMAWKLFDEMPDKDVVPW 280
Query: 416 ----------------------------KPNEITMVSVFCAIASSGTLKEGRWAHEYVLN 447
P+E+TMVS A + G L G W H Y+
Sbjct: 281 NAMIGGYVHANRGKEALALFNEMQAMNINPDEVTMVSCLSACSQLGALDVGIWIHHYIEK 340
Query: 448 NSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTL 507
+ ++LN L A+IDMYAKCG I A +VF + R + W AII GLA+HG+A+ +
Sbjct: 341 HELSLNVALGTALIDMYAKCGKITKAIQVFQELPGRNSLT--WTAIISGLALHGNAHGAI 398
Query: 508 KIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDL 567
+S++ ++ + +TF+G+LS CCH GLV+ G +YF M S +N+ P LKHY CMVDL
Sbjct: 399 AYFSEMIDNSVMPDEVTFLGLLSACCHGGLVEEGRKYFSQMSSKFNLSPKLKHYSCMVDL 458
Query: 568 LGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSR 627
LGRAG LE+AEE+I+SMP++AD V+WG L A RIHGNV +GERAA L + P
Sbjct: 459 LGRAGLLEEAEELIKSMPIEADAVVWGALFFACRIHGNVLMGERAASKLLQMDPHDSGIY 518
Query: 628 VLLSNIYADAGRWEDAFSIRKEMRDCGMKRLP 659
VLL+N+Y +A W++A RK MR G+++ P
Sbjct: 519 VLLANMYGEAEMWKEAGKARKLMRQRGVEKTP 550
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 129/509 (25%), Positives = 220/509 (43%), Gaps = 97/509 (19%)
Query: 26 LVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCS 85
+S L C + +SQ +QI S + +GL + F + LI A IS+ + + D C+
Sbjct: 53 FLSLLEKCKS---ISQLKQIQSQMVLTGLIEDGFASSRLIAFCA----ISEWRDL-DYCT 104
Query: 86 TLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF-R 144
NI+ + RN S+ I GF ++ REA+ ++ R
Sbjct: 105 -------NILFN--TRNPN---------------TFSWNVAIRGFLDSENPREAVVLYKR 140
Query: 145 DMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMY---- 200
++ G P+ T + + L I + G V+ L D + +S ++++
Sbjct: 141 VLQCDGTKPDNYTYPLLFKACARLSLIRMGSEILGHVLHLGFDSDIFVSNAVIHLLVSCG 200
Query: 201 ------------CV-------------CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAG 235
CV C +L AR LFD M + +VSW M+ G+A++G
Sbjct: 201 DLDGARKMFDKSCVRDLVSWNSMINGYCGNLESARKLFDSMTNKTMVSWTTMVVGYAQSG 260
Query: 236 LVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLIS 295
L+++A +LF+ +P KDVV W MI GY+ R EAL ++ M I P++V +V +S
Sbjct: 261 LLDMAWKLFDEMPDKDVVPWNAMIGGYVHANRGKEALALFNEMQAMNINPDEVTMVSCLS 320
Query: 296 ACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIAS 355
AC + A G+ IH I K + +I YA CG+I
Sbjct: 321 ACSQLGALDVGIWIHHYIEKHELSLNVALGTALIDMYAKCGKIT---------------- 364
Query: 356 WNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGV 415
A Q+F + R+ +W+A+ISG A + + A+ F M+D V
Sbjct: 365 ---------------KAIQVFQELPGRNSLTWTAIISGLALHGNAHGAIAYFSEMIDNSV 409
Query: 416 KPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLS--AAIIDMYAKCGSINTA 473
P+E+T + + A G ++EGR + +++ L+ L + ++D+ + G + A
Sbjct: 410 MPDEVTFLGLLSACCHGGLVEEGR-KYFSQMSSKFNLSPKLKHYSCMVDLLGRAGLLEEA 468
Query: 474 FEVFYHIRDRTTSVSPWNAIICGLAMHGD 502
E+ + +V W A+ +HG+
Sbjct: 469 EELIKSMPIEADAVV-WGALFFACRIHGN 496
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 106/258 (41%), Gaps = 73/258 (28%)
Query: 8 SVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINL 67
++FN +A N D E+ +VS L CS A+ G IH I K L N + +LI++
Sbjct: 298 ALFNEMQAMNINPD-EVTMVSCLSACSQLGALDVGIWIHHYIEKHELSLNVALGTALIDM 356
Query: 68 YAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMI 127
YAKCG I++A +VF + P + +++T++I
Sbjct: 357 YAKCGKITKAI-------------------------------QVFQELPGRNSLTWTAII 385
Query: 128 MGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMID 187
G A + A+ F +M V+P+EVT ++S+ H GG+ E
Sbjct: 386 SGLALHGNAHGAIAYFSEMIDNSVMPDEVTFLGLLSACCH-GGLVE-------------- 430
Query: 188 GFVIISTNLLNMYCVCSSLVEARSLFDEMKER-----NIVSWNVMLNGFAKAGLVELARE 242
E R F +M + + ++ M++ +AGL+E A E
Sbjct: 431 --------------------EGRKYFSQMSSKFNLSPKLKHYSCMVDLLGRAGLLEEAEE 470
Query: 243 LFERIP-SKDVVSWGTMI 259
L + +P D V WG +
Sbjct: 471 LIKSMPIEADAVVWGALF 488
>gi|357483151|ref|XP_003611862.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513197|gb|AES94820.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 663
Score = 331 bits (848), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 179/568 (31%), Positives = 305/568 (53%), Gaps = 33/568 (5%)
Query: 95 MISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPN 154
++S ++ L A ++FD+ P + +I G++ + ++L ++R M G++PN
Sbjct: 74 LVSSSVQLRDLRYAHKLFDQIPQPNKFMFNHLIKGYSNSSDPIKSLLLYRRMVCDGILPN 133
Query: 155 EVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFD 214
+ T+ V+ + W +H KL + + +LN+Y C
Sbjct: 134 QFTIPFVLKACAAKSCYWLGVCVHAQSFKLGMGSHACVQNAILNIYVAC----------- 182
Query: 215 EMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTM 274
GL+ AR +F+ I + +VSW +MI+GY ++ R EA+ M
Sbjct: 183 --------------------GLITSARRVFDDISERTLVSWNSMINGYSKMGRSEEAVLM 222
Query: 275 YRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAA 334
+R M G+ P+ +V L+S + F G +H +V G + + ++ YA
Sbjct: 223 FREMQEVGLEPDVFTLVGLLSVSTKHGNFDLGRFVHLHMVVTGIEIDSIVTNALMDMYAK 282
Query: 335 CGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGY 394
CG + A+ F+ + + SW +I + +G+I+ A + FN M ++V SW+++I +
Sbjct: 283 CGNLKCAKSVFDQMLDKDVVSWTCMINAYANHGLIDCALEFFNQMPGKNVVSWNSIIWCH 342
Query: 395 AQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLND 454
Q A++LF+ M D+GV N+ T+V++ + + G L G+ AH Y+ +N+ITL+
Sbjct: 343 VQEGLYAEAVDLFYRMCDSGVMANDTTLVAILSSCSHMGDLALGKQAHSYIFDNNITLSA 402
Query: 455 NLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLE 514
L AIIDMYAKCG++ TA +VF+ + ++ + WN II LA+HG ++++ ++
Sbjct: 403 TLCNAIIDMYAKCGALQTAMDVFFGMPEK--NAVSWNVIIGALALHGYGKEAIEMFEKMQ 460
Query: 515 KRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQL 574
+ + ITF G+LS C H+GLVD G+ YF+ M + + PD++HY CMVDLLGR G L
Sbjct: 461 ASGVCPDEITFTGLLSACSHSGLVDTGQHYFEIMNLTFGISPDVEHYACMVDLLGRRGLL 520
Query: 575 EDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIY 634
+A +I+ MP+K DVV+W LL A R +GN+ +G++ K L L + VLLSN+Y
Sbjct: 521 GEAISLIKKMPVKPDVVVWSALLGACRTYGNLAIGKQIMKQLLELGRYNSGLYVLLSNMY 580
Query: 635 ADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
+++ RW+D +I K + G+K+ S
Sbjct: 581 SESQRWDDMKNIWKILDQNGIKKCRAIS 608
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 129/486 (26%), Positives = 237/486 (48%), Gaps = 66/486 (13%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
L+ C+A G +H+ FK G+ S+ +QN+++N+Y CGLI+ A+ +FD S
Sbjct: 141 LKACAAKSCYWLGVCVHAQSFKLGMGSHACVQNAILNIYVACGLITSARRVFDDISERTL 200
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
V+ N MI+GY + MG ++ EA+ +FR+M+ +
Sbjct: 201 VSWNSMINGYSK--------------------------MGRSE-----EAVLMFREMQEV 229
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
G+ P+ TL ++S S G R +H ++ I+ I++ L++MY C +L A
Sbjct: 230 GLEPDVFTLVGLLSVSTKHGNFDLGRFVHLHMVVTGIEIDSIVTNALMDMYAKCGNLKCA 289
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLS 269
+S+FD+M ++++VSW M+N +A GL++ A E F ++P K+VVSW ++I ++Q +
Sbjct: 290 KSVFDQMLDKDVVSWTCMINAYANHGLIDCALEFFNQMPGKNVVSWNSIIWCHVQEGLYA 349
Query: 270 EALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATII 329
EA+ ++ M G+ ND +V ++S+C G Q HS I FD + AT+
Sbjct: 350 EAVDLFYRMCDSGVMANDTTLVAILSSCSHMGDLALGKQAHSYI----FDNNITLSATLC 405
Query: 330 HFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSA 389
NA+I + + G ++ A +F M +++ SW+
Sbjct: 406 ---------------------------NAIIDMYAKCGALQTAMDVFFGMPEKNAVSWNV 438
Query: 390 MISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNS 449
+I A + A+E+F M +GV P+EIT + A + SG + G+ E ++N +
Sbjct: 439 IIGALALHGYGKEAIEMFEKMQASGVCPDEITFTGLLSACSHSGLVDTGQHYFE-IMNLT 497
Query: 450 ITLNDNLS--AAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTL 507
++ ++ A ++D+ + G + A + + + V W+A++ +G+ +
Sbjct: 498 FGISPDVEHYACMVDLLGRRGLLGEAISLIKKMPVK-PDVVVWSALLGACRTYGNLAIGK 556
Query: 508 KIYSDL 513
+I L
Sbjct: 557 QIMKQL 562
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 95/369 (25%), Positives = 162/369 (43%), Gaps = 62/369 (16%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
LV L + H G+ +H + +G+E ++ + N+L+++YAKCG + AKS+FD
Sbjct: 236 FTLVGLLSVSTKHGNFDLGRFVHLHMVVTGIEIDSIVTNALMDMYAKCGNLKCAKSVFDQ 295
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
D V+ MI+ Y + ++ A E F++ P K VS+ S+I Q + EA+++F
Sbjct: 296 MLDKDVVSWTCMINAYANHGLIDCALEFFNQMPGKNVVSWNSIIWCHVQEGLYAEAVDLF 355
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
M GV+ N+ TL +++SS H+G + + H + I + +++MY C
Sbjct: 356 YRMCDSGVMANDTTLVAILSSCSHMGDLALGKQAHSYIFDNNITLSATLCNAIIDMYAKC 415
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYL 263
+L A +F M E+N VSWNV++ A G + A E+FE+
Sbjct: 416 GALQTAMDVFFGMPEKNAVSWNVIIGALALHGYGKEAIEMFEK----------------- 458
Query: 264 QVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDF 323
M G+ P+++ L+SAC HS +V G ++
Sbjct: 459 --------------MQASGVCPDEITFTGLLSACS-----------HSGLVDTGQHYFEI 493
Query: 324 IQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ-KR 382
+ T GI + + ++ R G++ +A L M K
Sbjct: 494 MNLT-------------------FGISPDVEHYACMVDLLGRRGLLGEAISLIKKMPVKP 534
Query: 383 DVYSWSAMI 391
DV WSA++
Sbjct: 535 DVVVWSALL 543
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 129/271 (47%), Gaps = 4/271 (1%)
Query: 348 GIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELF 407
G+ + + L++ ++ + A +LF+ + + + + ++ +I GY+ + P +L L+
Sbjct: 63 GLATQVLTLGKLVSSSVQLRDLRYAHKLFDQIPQPNKFMFNHLIKGYSNSSDPIKSLLLY 122
Query: 408 HGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKC 467
MV G+ PN+ T+ V A A+ G H + + + AI+++Y C
Sbjct: 123 RRMVCDGILPNQFTIPFVLKACAAKSCYWLGVCVHAQSFKLGMGSHACVQNAILNIYVAC 182
Query: 468 GSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIG 527
G I +A VF I +RT + WN++I G + G + + ++ ++++ ++ + T +G
Sbjct: 183 GLITSARRVFDDISERT--LVSWNSMINGYSKMGRSEEAVLMFREMQEVGLEPDVFTLVG 240
Query: 528 VLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMK 587
+LS G DLG R+ V +E D ++D+ + G L+ A+ V M +
Sbjct: 241 LLSVSTKHGNFDLG-RFVHLHMVVTGIEIDSIVTNALMDMYAKCGNLKCAKSVFDQM-LD 298
Query: 588 ADVVIWGTLLAASRIHGNVEVGERAAKSLAG 618
DVV W ++ A HG ++ + G
Sbjct: 299 KDVVSWTCMINAYANHGLIDCALEFFNQMPG 329
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 104/232 (44%), Gaps = 43/232 (18%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
+ LV+ L CS ++ G+Q HS IF + + + + N++I++YAKCG
Sbjct: 367 DTTLVAILSSCSHMGDLALGKQAHSYIFDNNITLSATLCNAIIDMYAKCG---------- 416
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
L A +VF P K VS+ +I A + +EA+E+
Sbjct: 417 ---------------------ALQTAMDVFFGMPEKNAVSWNVIIGALALHGYGKEAIEM 455
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
F M+ GV P+E+T ++S+ H G + + H I + G IS ++ + C+
Sbjct: 456 FEKMQASGVCPDEITFTGLLSACSHSGLVDTGQ--HYFEIMNLTFG---ISPDVEHYACM 510
Query: 203 C------SSLVEARSLFDEMKER-NIVSWNVMLNGFAKAGLVELARELFERI 247
L EA SL +M + ++V W+ +L G + + +++ +++
Sbjct: 511 VDLLGRRGLLGEAISLIKKMPVKPDVVVWSALLGACRTYGNLAIGKQIMKQL 562
>gi|414585731|tpg|DAA36302.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
Length = 865
Score = 331 bits (848), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 196/642 (30%), Positives = 337/642 (52%), Gaps = 38/642 (5%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
L A++ C A S Q+ +++ K + ++ + +L++++ +CG + A +F
Sbjct: 139 FTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGAVDLASRLFVR 198
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
N M++GY++ ++ A E+FD P + VS+ M+ +Q+ REAL++
Sbjct: 199 IKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMV 258
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLM--IDGFVIISTNLLNMYC 201
DM+ GV + T S +++ L + + LH VI+ + ID +V
Sbjct: 259 VDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYV----------- 307
Query: 202 VCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDG 261
S+LVE +AK+G + A+ +F + ++ V+W +I G
Sbjct: 308 -ASALVEL---------------------YAKSGCFKEAKGVFNSLHDRNNVAWTVLISG 345
Query: 262 YLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCY 321
+LQ +E++ ++ M + + + + LIS C M G Q+HS+ +K+G
Sbjct: 346 FLQYGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQA 405
Query: 322 DFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQK 381
+ ++I YA C + A F + I SW ++I + + G + AR+ F+ M +
Sbjct: 406 VVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSE 465
Query: 382 RDVYSWSAMISGYAQNEQPNMALELFHGMV-DAGVKPNEITMVSVFCAIASSGTLKEGRW 440
++V +W+AM+ Y Q+ L ++ M+ + V+P+ +T V++F A G K G
Sbjct: 466 KNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQ 525
Query: 441 AHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMH 500
+ + ++ +++ A+I MY+KCG I A +VF + + WNA+I G + H
Sbjct: 526 IIGRTVKVGLIIDTSVANAVITMYSKCGRILEARKVFDFLN--VKDIVSWNAMITGYSQH 583
Query: 501 GDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKH 560
G ++I+ D+ KR K + I+++ VLS C H+GLV G+ YF MK +N+ P L+H
Sbjct: 584 GMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKFYFDMMKRAHNISPGLEH 643
Query: 561 YGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQ 620
+ CMVDLLGRAG L +A+++I MPMK +WG LL+A +IHGN E+ E AAK + L
Sbjct: 644 FSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVWGALLSACKIHGNNELAELAAKHVFELD 703
Query: 621 PSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
S +L++ IYADAG+ +D+ IRK MRD G+K+ PG+S
Sbjct: 704 SPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGIKKNPGYS 745
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 156/624 (25%), Positives = 282/624 (45%), Gaps = 89/624 (14%)
Query: 25 ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKS-MFDS 83
A ALR C A A++ + +H + GL S F+QN+L++ Y CG +S A+ +
Sbjct: 6 AFADALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALSDARRLLLMD 65
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
+ + + N+M++GY + RL+DA E+F + P + S+ +++ G+ Q+ + +LE F
Sbjct: 66 IAHPNVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETF 125
Query: 144 RDMRILG-VIPNEVTLASVISSSVHLGGIWECRMLHGLVIKL--MIDGF-----VIISTN 195
M G PN TLA + S LG W H L ++L M+ F ++
Sbjct: 126 LSMHRSGDSWPNAFTLACAMKSCGALG--W-----HSLALQLLAMVQKFDSQDDSEVAAA 178
Query: 196 LLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSW 255
L++M+ C ++ A LF +KE + N ML G+ K V+ A ELF+ +P +DVVSW
Sbjct: 179 LVDMFVRCGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSW 238
Query: 256 GTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVK 315
M+ Q R+ EAL M M G+ + ++AC R + G Q+H+ +++
Sbjct: 239 NMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIR 298
Query: 316 AGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQL 375
NL I ++AS AL+ + ++G ++A+ +
Sbjct: 299 -----------------------NLPH------IDPYVAS--ALVELYAKSGCFKEAKGV 327
Query: 376 FNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTL 435
FN++ R+ +W+ +ISG+ Q ++ELF+ M + ++ + ++ S L
Sbjct: 328 FNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDL 387
Query: 436 KEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIIC 495
GR H L + +S ++I MYAKC ++ +A +F + ++ + W ++I
Sbjct: 388 CLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEK--DIVSWTSMIT 445
Query: 496 GLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVE 555
+ G+ + + + ++N+ IT+ +L G + G R +K M S V
Sbjct: 446 AYSQVGNVAKAREFFDGMSEKNV----ITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVR 501
Query: 556 PDLKHY-----GC------------------------------MVDLLGRAGQLEDAEEV 580
PD Y GC ++ + + G++ +A +V
Sbjct: 502 PDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRILEARKV 561
Query: 581 IRSMPMKADVVIWGTLLAASRIHG 604
+ +K D+V W ++ HG
Sbjct: 562 FDFLNVK-DIVSWNAMITGYSQHG 584
Score = 178 bits (451), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 124/477 (25%), Positives = 234/477 (49%), Gaps = 13/477 (2%)
Query: 178 HGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLF-DEMKERNIVSWNVMLNGFAKAGL 236
HG ++ + + V + LL+ Y C +L +AR L ++ N+++ NVMLNG+AK G
Sbjct: 27 HGRLVAVGLASAVFLQNTLLHAYLSCGALSDARRLLLMDIAHPNVITHNVMLNGYAKLGR 86
Query: 237 VELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIA-PNDVMIVDLIS 295
+ A ELF R+P++DV SW T++ GY Q + +L + +M G + PN + +
Sbjct: 87 LSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFTLACAMK 146
Query: 296 ACGRAMAFGEGLQIHSIIVKAGFDCYD--FIQATIIHFYAACGRINLARLQFELGIKDHI 353
+CG LQ+ +++ K FD D + A ++ + CG ++LA F + +
Sbjct: 147 SCGALGWHSLALQLLAMVQK--FDSQDDSEVAAALVDMFVRCGAVDLASRLFVRIKEPTM 204
Query: 354 ASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDA 413
N+++AG+++ ++ A +LF++M +RDV SW+ M+S +Q+ + AL++ M
Sbjct: 205 FCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSK 264
Query: 414 GVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTA 473
GV+ + T S A A +L+ G+ H V+ N ++ +++A++++YAK G A
Sbjct: 265 GVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKEA 324
Query: 474 FEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCC 533
VF + DR W +I G +G ++++++ + + L+ ++S CC
Sbjct: 325 KGVFNSLHDRNNVA--WTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGCC 382
Query: 534 HAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIW 593
+ LG + ++ + ++ + + L+ AE + R M K D+V W
Sbjct: 383 SRMDLCLGRQLHSLCLKSGQIQAVVVS-NSLISMYAKCDNLQSAEAIFRFMNEK-DIVSW 440
Query: 594 GTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEM 650
+++ A GNV +A + G+ + + + Y G ED + K M
Sbjct: 441 TSMITAYSQVGNV---AKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVM 494
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 137/260 (52%), Gaps = 10/260 (3%)
Query: 9 VFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLY 68
+FN +A L D + AL + + C + + + G+Q+HSL KSG + NSLI++Y
Sbjct: 358 LFNQMRAELMTLD-QFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMY 416
Query: 69 AKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIM 128
AKC + A+++F + D V+ MI+ Y + + ARE FD K +++ +M+
Sbjct: 417 AKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLG 476
Query: 129 GFAQNDCWREALEVFRDMRILGVI-PNEVTLASVISSSVHLGGIWECRMLHGLVIK--LM 185
+ Q+ + L +++ M + P+ VT ++ LG + G +K L+
Sbjct: 477 AYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLI 536
Query: 186 IDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFE 245
ID ++ ++ MY C ++EAR +FD + ++IVSWN M+ G+++ G+ + A E+F+
Sbjct: 537 ID--TSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFD 594
Query: 246 RIPSK----DVVSWGTMIDG 261
I + D +S+ ++ G
Sbjct: 595 DILKRGAKPDYISYVAVLSG 614
>gi|357498701|ref|XP_003619639.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494654|gb|AES75857.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1182
Score = 331 bits (848), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 172/443 (38%), Positives = 259/443 (58%), Gaps = 5/443 (1%)
Query: 225 NVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY-LQVERLSEALTMYRAMLCD-G 282
N L A A L A +LF++IP D+ + TMI + + +++ ++R+++ D G
Sbjct: 215 NKFLKNVALASLT-YAHKLFDQIPQPDLFIYNTMIKSHSMSPHSYLDSIAVFRSLIRDSG 273
Query: 283 IAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLAR 342
PN V ACG M EG Q+ + VK G D F+ +I + GR+ AR
Sbjct: 274 YFPNRYSFVFAFGACGNGMCVREGEQVFTHAVKVGLDGNVFVVNALIGMFGKWGRVEDAR 333
Query: 343 LQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNM 402
F+ + SWN +I ++ +G + A++LF+ M +RDV SWS +I+GY Q
Sbjct: 334 NVFDSAVDRDFYSWNTMIGAYVGSGNMVLAKELFDEMHERDVVSWSTIIAGYVQVGCFME 393
Query: 403 ALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIID 462
AL+ FH M+ + VKPNE TMVS A ++ L +G+W H Y+ ++I +ND L A++ID
Sbjct: 394 ALDFFHKMLQSEVKPNEYTMVSALAACSNLVALDQGKWIHVYIRRDNIKMNDRLLASLID 453
Query: 463 MYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNS 522
MYAKCG I++A VF H V PWNA+I G AMHG + ++ ++ + N
Sbjct: 454 MYAKCGEIDSASSVF-HEHKVKRKVWPWNAMIGGFAMHGKPEEAINVFEKMKVEKVSPNK 512
Query: 523 ITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIR 582
+TFI +L+ C H +V G+ YF+ M S Y + P+++HYGCMVDLL R+G L+D+EE+I
Sbjct: 513 VTFIALLNACSHGYMVKEGKSYFELMASDYGINPEIEHYGCMVDLLSRSGHLKDSEEMIL 572
Query: 583 SMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWED 642
SMPM DV IWG LL A RI+ ++E G R + + + P+H VLL NIY+ +GRW +
Sbjct: 573 SMPMAPDVAIWGALLNACRIYKDMERGYRIGRIIKEIDPNHIGCNVLLGNIYSTSGRWNE 632
Query: 643 AFSIRKEMR-DCGMKRLPGFSGV 664
A +R++ + K++PGFS +
Sbjct: 633 ARMVREKNEINSDRKKIPGFSSI 655
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 116/462 (25%), Positives = 213/462 (46%), Gaps = 54/462 (11%)
Query: 62 NSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRN---DRLNDAREVFDKTPIK 118
+SLI+L C I+Q K + T + ++ + +++N L A ++FD+ P
Sbjct: 183 SSLIDL---CKSINQIKQTHANLITTAQITLPVIANKFLKNVALASLTYAHKLFDQIPQP 239
Query: 119 CCVSYTSMIMGFAQND-CWREALEVFRDM-RILGVIPNEVTLASVISSSVHLGGIWECRM 176
Y +MI + + + +++ VFR + R G PN + + + + E
Sbjct: 240 DLFIYNTMIKSHSMSPHSYLDSIAVFRSLIRDSGYFPNRYSFVFAFGACGNGMCVREGEQ 299
Query: 177 LHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGL 236
+ +K+ +DG V + L+ M+ + +AR++FD +R+ SWN M+ + +G
Sbjct: 300 VFTHAVKVGLDGNVFVVNALIGMFGKWGRVEDARNVFDSAVDRDFYSWNTMIGAYVGSGN 359
Query: 237 VELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISA 296
+ LA+ELF+ + +DVVSW T+I GY+QV EAL + ML + PN+ +V ++A
Sbjct: 360 MVLAKELFDEMHERDVVSWSTIIAGYVQVGCFMEALDFFHKMLQSEVKPNEYTMVSALAA 419
Query: 297 CGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQF-ELGIKDHIAS 355
C +A +G IH I + D + A++I YA CG I+ A F E +K +
Sbjct: 420 CSNLVALDQGKWIHVYIRRDNIKMNDRLLASLIDMYAKCGEIDSASSVFHEHKVKRKVWP 479
Query: 356 WNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGV 415
WNA+I GF +G +P A+ +F M V
Sbjct: 480 WNAMIGGFAMHG-------------------------------KPEEAINVFEKMKVEKV 508
Query: 416 KPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLS--AAIIDMYAKCGSINTA 473
PN++T +++ A + +KEG+ E ++ + +N + ++D+ ++ G + +
Sbjct: 509 SPNKVTFIALLNACSHGYMVKEGKSYFE-LMASDYGINPEIEHYGCMVDLLSRSGHLKDS 567
Query: 474 FEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEK 515
E+ + V+ W A++ +IY D+E+
Sbjct: 568 EEMILSM-PMAPDVAIWGALLNA----------CRIYKDMER 598
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 103/422 (24%), Positives = 187/422 (44%), Gaps = 66/422 (15%)
Query: 25 ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSC 84
+ V A C + V +G+Q+ + K GL+ N F+ N+LI ++ K G + A+++FDS
Sbjct: 280 SFVFAFGACGNGMCVREGEQVFTHAVKVGLDGNVFVVNALIGMFGKWGRVEDARNVFDSA 339
Query: 85 STLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFR 144
D + N MI Y+ + + A+E+FD+ + VS++++I G+ Q C+ EAL+ F
Sbjct: 340 VDRDFYSWNTMIGAYVGSGNMVLAKELFDEMHERDVVSWSTIIAGYVQVGCFMEALDFFH 399
Query: 145 DMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCS 204
M V PNE T+ S +++ +L + + + +H + + I + +L++MY C
Sbjct: 400 KMLQSEVKPNEYTMVSALAACSNLVALDQGKWIHVYIRRDNIKMNDRLLASLIDMYAKCG 459
Query: 205 SLVEARSLFDEMK-ERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYL 263
+ A S+F E K +R + WN M+ GFA G E
Sbjct: 460 EIDSASSVFHEHKVKRKVWPWNAMIGGFAMHGKPE------------------------- 494
Query: 264 QVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDF 323
EA+ ++ M + ++PN V + L++AC H +VK G ++
Sbjct: 495 ------EAINVFEKMKVEKVSPNKVTFIALLNACS-----------HGYMVKEGKSYFEL 537
Query: 324 IQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ-KR 382
+ + + GI I + ++ R+G ++D+ ++ +M
Sbjct: 538 MAS-------------------DYGINPEIEHYGCMVDLLSRSGHLKDSEEMILSMPMAP 578
Query: 383 DVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAI-ASSGTLKEGRWA 441
DV W A+++ A +M G + + PN I + I ++SG E R
Sbjct: 579 DVAIWGALLN--ACRIYKDMERGYRIGRIIKEIDPNHIGCNVLLGNIYSTSGRWNEARMV 636
Query: 442 HE 443
E
Sbjct: 637 RE 638
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 127/313 (40%), Gaps = 94/313 (30%)
Query: 3 LDHFHSVFNSQ-KANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQ 61
LD FH + S+ K N E +VSAL CS +A+ QG+ IH I + ++ N +
Sbjct: 395 LDFFHKMLQSEVKPN------EYTMVSALAACSNLVALDQGKWIHVYIRRDNIKMNDRLL 448
Query: 62 NSLINLYAKCGLISQAKSMFDSCSTLDPV-ACNIMISGYIRNDRLNDAREVFDKTPIKCC 120
SLI++YAKCG I A S+F V N MI G
Sbjct: 449 ASLIDMYAKCGEIDSASSVFHEHKVKRKVWPWNAMIGG---------------------- 486
Query: 121 VSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGL 180
FA + EA+ VF M++ V PN+VT +++++ HG
Sbjct: 487 ---------FAMHGKPEEAINVFEKMKVEKVSPNKVTFIALLNACS-----------HGY 526
Query: 181 VIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKE-----RNIVSWNVMLNGFAKAG 235
++K E +S F+ M I + M++ +++G
Sbjct: 527 MVK------------------------EGKSYFELMASDYGINPEIEHYGCMVDLLSRSG 562
Query: 236 LVELARELFERIP-SKDVVSWGTMIDG---YLQVERLSEALTMYR-AMLCDGIAPN---- 286
++ + E+ +P + DV WG +++ Y +ER YR + I PN
Sbjct: 563 HLKDSEEMILSMPMAPDVAIWGALLNACRIYKDMER------GYRIGRIIKEIDPNHIGC 616
Query: 287 DVMIVDLISACGR 299
+V++ ++ S GR
Sbjct: 617 NVLLGNIYSTSGR 629
>gi|259490042|ref|NP_001159140.1| hypothetical protein [Zea mays]
gi|223942207|gb|ACN25187.1| unknown [Zea mays]
gi|414585730|tpg|DAA36301.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
Length = 885
Score = 331 bits (848), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 196/642 (30%), Positives = 337/642 (52%), Gaps = 38/642 (5%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
L A++ C A S Q+ +++ K + ++ + +L++++ +CG + A +F
Sbjct: 159 FTLACAMKSCGALGWHSLALQLLAMVQKFDSQDDSEVAAALVDMFVRCGAVDLASRLFVR 218
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
N M++GY++ ++ A E+FD P + VS+ M+ +Q+ REAL++
Sbjct: 219 IKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMV 278
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLM--IDGFVIISTNLLNMYC 201
DM+ GV + T S +++ L + + LH VI+ + ID +V
Sbjct: 279 VDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYV----------- 327
Query: 202 VCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDG 261
S+LVE +AK+G + A+ +F + ++ V+W +I G
Sbjct: 328 -ASALVEL---------------------YAKSGCFKEAKGVFNSLHDRNNVAWTVLISG 365
Query: 262 YLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCY 321
+LQ +E++ ++ M + + + + LIS C M G Q+HS+ +K+G
Sbjct: 366 FLQYGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQA 425
Query: 322 DFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQK 381
+ ++I YA C + A F + I SW ++I + + G + AR+ F+ M +
Sbjct: 426 VVVSNSLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSE 485
Query: 382 RDVYSWSAMISGYAQNEQPNMALELFHGMV-DAGVKPNEITMVSVFCAIASSGTLKEGRW 440
++V +W+AM+ Y Q+ L ++ M+ + V+P+ +T V++F A G K G
Sbjct: 486 KNVITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQ 545
Query: 441 AHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMH 500
+ + ++ +++ A+I MY+KCG I A +VF + + WNA+I G + H
Sbjct: 546 IIGRTVKVGLIIDTSVANAVITMYSKCGRILEARKVFDFLN--VKDIVSWNAMITGYSQH 603
Query: 501 GDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKH 560
G ++I+ D+ KR K + I+++ VLS C H+GLV G+ YF MK +N+ P L+H
Sbjct: 604 GMGKQAIEIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKFYFDMMKRAHNISPGLEH 663
Query: 561 YGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQ 620
+ CMVDLLGRAG L +A+++I MPMK +WG LL+A +IHGN E+ E AAK + L
Sbjct: 664 FSCMVDLLGRAGHLTEAKDLIDDMPMKPTAEVWGALLSACKIHGNNELAELAAKHVFELD 723
Query: 621 PSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
S +L++ IYADAG+ +D+ IRK MRD G+K+ PG+S
Sbjct: 724 SPDSGSYMLMAKIYADAGKSDDSAQIRKLMRDKGIKKNPGYS 765
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 156/624 (25%), Positives = 282/624 (45%), Gaps = 89/624 (14%)
Query: 25 ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKS-MFDS 83
A ALR C A A++ + +H + GL S F+QN+L++ Y CG +S A+ +
Sbjct: 26 AFADALRSCGARGALAGARALHGRLVAVGLASAVFLQNTLLHAYLSCGALSDARRLLLMD 85
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
+ + + N+M++GY + RL+DA E+F + P + S+ +++ G+ Q+ + +LE F
Sbjct: 86 IAHPNVITHNVMLNGYAKLGRLSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETF 145
Query: 144 RDMRILG-VIPNEVTLASVISSSVHLGGIWECRMLHGLVIKL--MIDGF-----VIISTN 195
M G PN TLA + S LG W H L ++L M+ F ++
Sbjct: 146 LSMHRSGDSWPNAFTLACAMKSCGALG--W-----HSLALQLLAMVQKFDSQDDSEVAAA 198
Query: 196 LLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSW 255
L++M+ C ++ A LF +KE + N ML G+ K V+ A ELF+ +P +DVVSW
Sbjct: 199 LVDMFVRCGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERDVVSW 258
Query: 256 GTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVK 315
M+ Q R+ EAL M M G+ + ++AC R + G Q+H+ +++
Sbjct: 259 NMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIR 318
Query: 316 AGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQL 375
NL I ++AS AL+ + ++G ++A+ +
Sbjct: 319 -----------------------NLPH------IDPYVAS--ALVELYAKSGCFKEAKGV 347
Query: 376 FNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTL 435
FN++ R+ +W+ +ISG+ Q ++ELF+ M + ++ + ++ S L
Sbjct: 348 FNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGCCSRMDL 407
Query: 436 KEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIIC 495
GR H L + +S ++I MYAKC ++ +A +F + ++ + W ++I
Sbjct: 408 CLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAEAIFRFMNEK--DIVSWTSMIT 465
Query: 496 GLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVE 555
+ G+ + + + ++N+ IT+ +L G + G R +K M S V
Sbjct: 466 AYSQVGNVAKAREFFDGMSEKNV----ITWNAMLGAYIQHGAEEDGLRMYKVMLSEEYVR 521
Query: 556 PDLKHY-----GC------------------------------MVDLLGRAGQLEDAEEV 580
PD Y GC ++ + + G++ +A +V
Sbjct: 522 PDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAVITMYSKCGRILEARKV 581
Query: 581 IRSMPMKADVVIWGTLLAASRIHG 604
+ +K D+V W ++ HG
Sbjct: 582 FDFLNVK-DIVSWNAMITGYSQHG 604
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 124/477 (25%), Positives = 234/477 (49%), Gaps = 13/477 (2%)
Query: 178 HGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLF-DEMKERNIVSWNVMLNGFAKAGL 236
HG ++ + + V + LL+ Y C +L +AR L ++ N+++ NVMLNG+AK G
Sbjct: 47 HGRLVAVGLASAVFLQNTLLHAYLSCGALSDARRLLLMDIAHPNVITHNVMLNGYAKLGR 106
Query: 237 VELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIA-PNDVMIVDLIS 295
+ A ELF R+P++DV SW T++ GY Q + +L + +M G + PN + +
Sbjct: 107 LSDAVELFGRMPARDVASWNTLMSGYFQSRQYLVSLETFLSMHRSGDSWPNAFTLACAMK 166
Query: 296 ACGRAMAFGEGLQIHSIIVKAGFDCYD--FIQATIIHFYAACGRINLARLQFELGIKDHI 353
+CG LQ+ +++ K FD D + A ++ + CG ++LA F + +
Sbjct: 167 SCGALGWHSLALQLLAMVQK--FDSQDDSEVAAALVDMFVRCGAVDLASRLFVRIKEPTM 224
Query: 354 ASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDA 413
N+++AG+++ ++ A +LF++M +RDV SW+ M+S +Q+ + AL++ M
Sbjct: 225 FCRNSMLAGYVKTYGVDHALELFDSMPERDVVSWNMMVSALSQSGRVREALDMVVDMQSK 284
Query: 414 GVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTA 473
GV+ + T S A A +L+ G+ H V+ N ++ +++A++++YAK G A
Sbjct: 285 GVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVASALVELYAKSGCFKEA 344
Query: 474 FEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCC 533
VF + DR W +I G +G ++++++ + + L+ ++S CC
Sbjct: 345 KGVFNSLHDRNNVA--WTVLISGFLQYGCFTESVELFNQMRAELMTLDQFALATLISGCC 402
Query: 534 HAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIW 593
+ LG + ++ + ++ + + L+ AE + R M K D+V W
Sbjct: 403 SRMDLCLGRQLHSLCLKSGQIQAVVVS-NSLISMYAKCDNLQSAEAIFRFMNEK-DIVSW 460
Query: 594 GTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEM 650
+++ A GNV +A + G+ + + + Y G ED + K M
Sbjct: 461 TSMITAYSQVGNV---AKAREFFDGMSEKNVITWNAMLGAYIQHGAEEDGLRMYKVM 514
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 137/260 (52%), Gaps = 10/260 (3%)
Query: 9 VFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLY 68
+FN +A L D + AL + + C + + + G+Q+HSL KSG + NSLI++Y
Sbjct: 378 LFNQMRAELMTLD-QFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMY 436
Query: 69 AKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIM 128
AKC + A+++F + D V+ MI+ Y + + ARE FD K +++ +M+
Sbjct: 437 AKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLG 496
Query: 129 GFAQNDCWREALEVFRDMRILGVI-PNEVTLASVISSSVHLGGIWECRMLHGLVIK--LM 185
+ Q+ + L +++ M + P+ VT ++ LG + G +K L+
Sbjct: 497 AYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLI 556
Query: 186 IDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFE 245
ID ++ ++ MY C ++EAR +FD + ++IVSWN M+ G+++ G+ + A E+F+
Sbjct: 557 ID--TSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFD 614
Query: 246 RIPSK----DVVSWGTMIDG 261
I + D +S+ ++ G
Sbjct: 615 DILKRGAKPDYISYVAVLSG 634
>gi|359497398|ref|XP_002270940.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 640
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 191/523 (36%), Positives = 274/523 (52%), Gaps = 68/523 (13%)
Query: 177 LHGLVIKLMIDGFVIISTNLLNMYCVCSS---LVEARSLFDEMKERNIVSWNVMLNGFAK 233
+H L+IK +DG + LL CSS L+ ARS+FDE
Sbjct: 22 IHALIIKTSLDGNNFVLAKLLRRLFACSSANDLLYARSVFDE------------------ 63
Query: 234 AGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDL 293
IPS D W TMI YL + E+++++ M P D + L
Sbjct: 64 -------------IPSPDTFIWNTMIRAYLNSQNPQESMSLFFQMRHQECIPIDSYSLSL 110
Query: 294 -ISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAA------------------ 334
I ACGR G G ++H+ ++K G F++ +I YA
Sbjct: 111 VIQACGRLKDPGNGQKLHTQVLKIGLGSDLFVETALIEMYAKFGDIEIARNILDEMAHPD 170
Query: 335 -------------CGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQK 381
G INLA F+ + + SWN +I G G + A++LF+ +
Sbjct: 171 LVPYNVLLAEYVRVGEINLAHDLFDRMPERDLVSWNTMIHGHASLGDVGTAKKLFDRTCE 230
Query: 382 RDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWA 441
RD+ SWS+MI+ YA+ Q N AL LFH M A V P+++TMVSV A G L G+
Sbjct: 231 RDLISWSSMIAAYAKARQSNEALRLFHEMQLANVLPDKVTMVSVLSACGDVGALGMGKMI 290
Query: 442 HEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHG 501
HE + N I ++ L +++DMYAKCG I+ + VF + +R V W+A+I GLA HG
Sbjct: 291 HECIERNRIEIDLKLGTSLVDMYAKCGDIDNSLRVFNGMNNR--DVFAWSAMIMGLANHG 348
Query: 502 DANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHY 561
L L +S + +IK N +TFIGVLS C H GLVD G YF SM VY+V P ++HY
Sbjct: 349 FGELALDHFSKMISEDIKPNDVTFIGVLSACSHIGLVDEGWTYFTSMSKVYDVSPKIEHY 408
Query: 562 GCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQP 621
GC+VD+LGRAG+L++A E+I+SMP D ++W LL A RI+ NVE+ E A +L L+P
Sbjct: 409 GCVVDILGRAGRLQEAMELIKSMPFAPDAIVWRALLGACRIYKNVEIAEEATVNLLELEP 468
Query: 622 SHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
+ VLLSNIY+ A W+ ++R+ M++ ++++PG S +
Sbjct: 469 HVDGNYVLLSNIYSQAKEWDKVVNVRRMMKNINIQKVPGSSSI 511
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 123/472 (26%), Positives = 212/472 (44%), Gaps = 94/472 (19%)
Query: 39 VSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISG 98
++Q QIH+LI K+ L+ N F+ L+ + +F +CS+
Sbjct: 16 LNQIIQIHALIIKTSLDGNNFVLAKLL------------RRLF-ACSSA----------- 51
Query: 99 YIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIP-NEVT 157
ND L AR VFD+ P + +MI + + +E++ +F MR IP + +
Sbjct: 52 ---NDLLY-ARSVFDEIPSPDTFIWNTMIRAYLNSQNPQESMSLFFQMRHQECIPIDSYS 107
Query: 158 LASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARS------ 211
L+ VI + L + LH V+K+ + + + T L+ MY + AR+
Sbjct: 108 LSLVIQACGRLKDPGNGQKLHTQVLKIGLGSDLFVETALIEMYAKFGDIEIARNILDEMA 167
Query: 212 -------------------------LFDEMKERNIVSWNVMLNGFAKAGLVELARELFER 246
LFD M ER++VSWN M++G A G V A++LF+R
Sbjct: 168 HPDLVPYNVLLAEYVRVGEINLAHDLFDRMPERDLVSWNTMIHGHASLGDVGTAKKLFDR 227
Query: 247 IPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEG 306
+D++SW +MI Y + + +EAL ++ M + P+ V +V ++SACG A G G
Sbjct: 228 TCERDLISWSSMIAAYAKARQSNEALRLFHEMQLANVLPDKVTMVSVLSACGDVGALGMG 287
Query: 307 LQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRN 366
IH I + + + +++ YA CG
Sbjct: 288 KMIHECIERNRIEIDLKLGTSLVDMYAKCGD----------------------------- 318
Query: 367 GMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVF 426
I+++ ++FN M RDV++WSAMI G A + +AL+ F M+ +KPN++T + V
Sbjct: 319 --IDNSLRVFNGMNNRDVFAWSAMIMGLANHGFGELALDHFSKMISEDIKPNDVTFIGVL 376
Query: 427 CAIASSGTLKEGRWAHEYVLNNSITLNDNLS--AAIIDMYAKCGSINTAFEV 476
A + G + EG W + ++ ++ + ++D+ + G + A E+
Sbjct: 377 SACSHIGLVDEG-WTYFTSMSKVYDVSPKIEHYGCVVDILGRAGRLQEAMEL 427
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 151/316 (47%), Gaps = 64/316 (20%)
Query: 22 YELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMF 81
Y L+LV ++ C GQ++H+ + K GL S+ F++ +LI +YAK G I A+++
Sbjct: 106 YSLSLV--IQACGRLKDPGNGQKLHTQVLKIGLGSDLFVETALIEMYAKFGDIEIARNIL 163
Query: 82 DSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFA---------- 131
D + D V N++++ Y+R +N A ++FD+ P + VS+ +MI G A
Sbjct: 164 DEMAHPDLVPYNVLLAEYVRVGEINLAHDLFDRMPERDLVSWNTMIHGHASLGDVGTAKK 223
Query: 132 --QNDCWR-------------------EALEVFRDMRILGVIPNEVTLASVISSSVHLGG 170
C R EAL +F +M++ V+P++VT+ SV+S+ +G
Sbjct: 224 LFDRTCERDLISWSSMIAAYAKARQSNEALRLFHEMQLANVLPDKVTMVSVLSACGDVGA 283
Query: 171 IWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNG 230
+ +M+H + + I+ + + T+L++MY C + + +F+ M R++ +W+ M+ G
Sbjct: 284 LGMGKMIHECIERNRIEIDLKLGTSLVDMYAKCGDIDNSLRVFNGMNNRDVFAWSAMIMG 343
Query: 231 FAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMI 290
A G ELA + F ++ S+D I PNDV
Sbjct: 344 LANHGFGELALDHFSKMISED-------------------------------IKPNDVTF 372
Query: 291 VDLISACGRAMAFGEG 306
+ ++SAC EG
Sbjct: 373 IGVLSACSHIGLVDEG 388
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/351 (22%), Positives = 150/351 (42%), Gaps = 47/351 (13%)
Query: 293 LISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDH 352
++S A + +QIH++I+K D +F+ A ++ AC N L + + D
Sbjct: 6 VMSLLQNATKLNQIIQIHALIIKTSLDGNNFVLAKLLRRLFACSSAN--DLLYARSVFDE 63
Query: 353 IAS-----WNALIAGFIRNGMIEDARQLFNNMQKR-----DVYSWSAMISGYAQNEQPNM 402
I S WN +I ++ + +++ LF M+ + D YS S +I + + P
Sbjct: 64 IPSPDTFIWNTMIRAYLNSQNPQESMSLFFQMRHQECIPIDSYSLSLVIQACGRLKDPGN 123
Query: 403 ALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGR-----WAH-----------EYVL 446
+L ++ G+ + ++ A G ++ R AH EYV
Sbjct: 124 GQKLHTQVLKIGLGSDLFVETALIEMYAKFGDIEIARNILDEMAHPDLVPYNVLLAEYVR 183
Query: 447 NNSITLNDNLSA-----------AIIDMYAKCGSINTAFEVFYHIRDRT--TSVSPWNAI 493
I L +L +I +A G + TA ++F DRT + W+++
Sbjct: 184 VGEINLAHDLFDRMPERDLVSWNTMIHGHASLGDVGTAKKLF----DRTCERDLISWSSM 239
Query: 494 ICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYN 553
I A +N L+++ +++ N+ + +T + VLS C G + +G+ + ++
Sbjct: 240 IAAYAKARQSNEALRLFHEMQLANVLPDKVTMVSVLSACGDVGALGMGKMIHECIER-NR 298
Query: 554 VEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHG 604
+E DLK +VD+ + G ++++ V M + DV W ++ HG
Sbjct: 299 IEIDLKLGTSLVDMYAKCGDIDNSLRVFNGMNNR-DVFAWSAMIMGLANHG 348
>gi|296084925|emb|CBI28334.3| unnamed protein product [Vitis vinifera]
Length = 604
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 185/485 (38%), Positives = 285/485 (58%), Gaps = 24/485 (4%)
Query: 192 ISTN-LLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGF-------AKAGLVELAREL 243
ISTN ++++ C SL E R + +M + N+++ ++ +G ++ A +
Sbjct: 4 ISTNPVVSVLDKCKSLCELRQIHAQMIKTNLLNHQFTVSRLIAFCSLSGVSGGLDYASSV 63
Query: 244 FERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAML-CDGIAPN-DVMIVDLISACGRAM 301
F RI + + +I G+ E+L +Y ML C + + I ++ ACG+ +
Sbjct: 64 FSRIQHPNSFIFFALIKGFSDTSNPVESLILYARMLSCLNYSSGVEFSIPSVLKACGKLL 123
Query: 302 AFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIA 361
AF EG Q+H ++K F+ +++ Y G I LAR F+ + SWN++IA
Sbjct: 124 AFDEGRQVHGQVLKTHLWFDPFVGNSMVRMYIDFGEIELARRVFDRMPNRDVVSWNSMIA 183
Query: 362 GFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEIT 421
G+++ G IE A +LF+ M +RD+ S +AMI GY + M+ G++P+
Sbjct: 184 GYLKAGEIELASELFDEMPERDLVSCNAMIDGYGKE------------MLSLGLRPDGPA 231
Query: 422 MVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDN-LSAAIIDMYAKCGSINTAFEVFYHI 480
+VSV AIA G ++EG+W H YV N I L+ + +A+IDMY+KCG I A+ VF I
Sbjct: 232 IVSVLSAIADLGFVEEGKWLHAYVSMNKIELSSGFIGSALIDMYSKCGYIENAYHVFRSI 291
Query: 481 RDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDL 540
R ++ WN++I GLA+HG A L I+ ++E+ +I+ N ITF+G+LSTC H GLV+
Sbjct: 292 SHRR-NIGDWNSMISGLAIHGLAREALDIFVEMERMDIEPNEITFLGLLSTCSHGGLVEE 350
Query: 541 GERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAAS 600
G+ YF+SM Y + P ++HYGCM+DL GRAG+LEDA VI++MP +AD++ W +L+AS
Sbjct: 351 GQFYFESMHEKYKIVPRIQHYGCMIDLFGRAGRLEDALGVIQNMPFEADLLAWKAILSAS 410
Query: 601 RIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPG 660
HG++E+G+ AA L P S VLLSNIYA AGRW+D IR MR G+K++ G
Sbjct: 411 MKHGHIEIGKSAALRAIELAPDDSSSYVLLSNIYAKAGRWDDVAKIRLMMRQRGVKKIAG 470
Query: 661 FSGVV 665
S ++
Sbjct: 471 CSSML 475
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 120/484 (24%), Positives = 208/484 (42%), Gaps = 86/484 (17%)
Query: 26 LVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLI---NLYAKCGLISQAKSMFD 82
+VS L C + + + +QIH+ + K+ L ++ F + LI +L G + A S+F
Sbjct: 9 VVSVLDKCKS---LCELRQIHAQMIKTNLLNHQFTVSRLIAFCSLSGVSGGLDYASSVFS 65
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+ +I G+ +D N + + C++Y+S +
Sbjct: 66 RIQHPNSFIFFALIKGF--SDTSNPVESLILYARMLSCLNYSSGV--------------- 108
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIK--LMIDGFVIISTNLLNMY 200
E ++ SV+ + L E R +HG V+K L D FV +++ MY
Sbjct: 109 ------------EFSIPSVLKACGKLLAFDEGRQVHGQVLKTHLWFDPFV--GNSMVRMY 154
Query: 201 CVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMID 260
+ AR +FD M R++VSWN M+ G+ KAG +ELA ELF+ +P +D+VS MID
Sbjct: 155 IDFGEIELARRVFDRMPNRDVVSWNSMIAGYLKAGEIELASELFDEMPERDLVSCNAMID 214
Query: 261 GYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDC 320
GY + ML G+ P+ IV ++SA EG +H+ + +
Sbjct: 215 GY------------GKEMLSLGLRPDGPAIVSVLSAIADLGFVEEGKWLHAYVSMNKIEL 262
Query: 321 YD-FIQATIIHFYAACGRINLARLQFE-LGIKDHIASWNALIAGFIRNGMIEDARQLFNN 378
FI + +I Y+ CG I A F + + +I WN++I+G +G+ +A +F
Sbjct: 263 SSGFIGSALIDMYSKCGYIENAYHVFRSISHRRNIGDWNSMISGLAIHGLAREALDIFVE 322
Query: 379 MQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG 438
M++ D ++PNEIT + + + G ++EG
Sbjct: 323 MERMD-------------------------------IEPNEITFLGLLSTCSHGGLVEEG 351
Query: 439 RWAHEYVLNN-SITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGL 497
++ E + I +ID++ + G + A V ++ ++ W AI+
Sbjct: 352 QFYFESMHEKYKIVPRIQHYGCMIDLFGRAGRLEDALGVIQNMPFEADLLA-WKAILSAS 410
Query: 498 AMHG 501
HG
Sbjct: 411 MKHG 414
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 113/433 (26%), Positives = 188/433 (43%), Gaps = 98/433 (22%)
Query: 19 NSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAK 78
+S E ++ S L+ C +A +G+Q+H + K+ L + F+ NS++ +Y G I A+
Sbjct: 105 SSGVEFSIPSVLKACGKLLAFDEGRQVHGQVLKTHLWFDPFVGNSMVRMYIDFGEIELAR 164
Query: 79 SMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWRE 138
+FD D V+ N MI+GY++ + A E+FD+ P + VS +MI G+
Sbjct: 165 RVFDRMPNRDVVSWNSMIAGYLKAGEIELASELFDEMPERDLVSCNAMIDGYG------- 217
Query: 139 ALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMID---GFVIISTN 195
++M LG+ P+ + SV+S+ LG + E + LH V I+ GF I +
Sbjct: 218 -----KEMLSLGLRPDGPAIVSVLSAIADLGFVEEGKWLHAYVSMNKIELSSGF--IGSA 270
Query: 196 LLNMYCVCSSLVEARSLFDEMKE-RNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVS 254
L++MY C + A +F + RNI WN M++G A G LARE
Sbjct: 271 LIDMYSKCGYIENAYHVFRSISHRRNIGDWNSMISGLAIHG---LARE------------ 315
Query: 255 WGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIV 314
+D ++++ER+ I PN++ + L+S C H +V
Sbjct: 316 ---ALDIFVEMERMD-------------IEPNEITFLGLLSTCS-----------HGGLV 348
Query: 315 KAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQ 374
+ G FY + + I I + +I F R G +EDA
Sbjct: 349 EEG------------QFY-------FESMHEKYKIVPRIQHYGCMIDLFGRAGRLEDALG 389
Query: 375 LFNNMQ-KRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSG 433
+ NM + D+ +W A++S + HG ++ G K + + + +SS
Sbjct: 390 VIQNMPFEADLLAWKAILSASMK-----------HGHIEIG-KSAALRAIELAPDDSSSY 437
Query: 434 TL------KEGRW 440
L K GRW
Sbjct: 438 VLLSNIYAKAGRW 450
>gi|449465795|ref|XP_004150613.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Cucumis sativus]
Length = 603
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 195/644 (30%), Positives = 324/644 (50%), Gaps = 105/644 (16%)
Query: 27 VSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCST 86
V+ L+ C+ H +++G+Q+HSL+ G + SLIN+Y+KCG + +A +F
Sbjct: 15 VAFLQSCADHQNLNKGKQLHSLMITYGFSPSPPSITSLINMYSKCGQMGEAILVF----- 69
Query: 87 LDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDM 146
DP C+ R VF +Y ++I GF N + + ++ M
Sbjct: 70 YDP--CH--------------ERNVF---------AYNAIISGFVSNGLASKGFQFYKKM 104
Query: 147 RILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSL 206
R+ GV+P++ T V+ + + E + +HG ++K+ ++ V + + L+N Y
Sbjct: 105 RLEGVMPDKYTFPCVVRTCCE---VMEVKKIHGCLLKMGLELDVFVGSALVNTY------ 155
Query: 207 VEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVE 266
K G +E A+++F + +DVV W MI+GY ++
Sbjct: 156 -------------------------LKNGSMEDAQKVFGELSIRDVVLWNAMINGYAKIG 190
Query: 267 RLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQA 326
L EAL ++R M G+AP+ I ++S G +H I++K G+D +
Sbjct: 191 CLDEALEVFRRMHVKGVAPSRFTITGILSVFASRGDLDNGKTVHGIVMKMGYDSGVSVSN 250
Query: 327 TIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYS 386
+I Y C I DA +F + ++D++S
Sbjct: 251 ALIDMYGKCKHIG-------------------------------DALIIFEMINEKDIFS 279
Query: 387 WSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVL 446
W+++IS + Q + L LF M+ +G+ P+ +T+ +V A + L GR H Y++
Sbjct: 280 WNSIISVHEQCGDHDGTLRLFDKMLGSGILPDLVTITTVLPACSHLAALMHGREIHGYMI 339
Query: 447 NNSITLNDN--------LSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLA 498
N + +D +S A++DMYAKCGS+N A ++F + + V+ WN +I G
Sbjct: 340 INGLGKDDENGAVDNLLVSNAVMDMYAKCGSMNNALKIFDSMSKK--DVASWNIMIMGYG 397
Query: 499 MHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDL 558
MHG A L ++S + + K N +T +GVLS C HAG V G + M+S + V P +
Sbjct: 398 MHGYALEALGMFSQMCEAEFKPNEVTLVGVLSACNHAGFVSHGRLFLAQMESTFGVIPTI 457
Query: 559 KHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAG 618
+HY C++D+LGRAG LEDA E+++ MP++A+ V+W LL A R+HGN E+ E AA+ +
Sbjct: 458 EHYTCVIDMLGRAGHLEDAYEIVQKMPIQANPVVWRALLGACRLHGNAELAEIAARQVLQ 517
Query: 619 LQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
L+P H S VL+SN+Y GR+E+ +RK M++ +K+ PG S
Sbjct: 518 LEPEHCGSYVLMSNVYGVIGRYEEVLEVRKTMKEQNVKKTPGCS 561
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 112/273 (41%), Gaps = 54/273 (19%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLES--------NTFIQNSLINLYAKCGLIS 75
+ + + L CS A+ G++IH + +GL N + N+++++YAKCG ++
Sbjct: 313 VTITTVLPACSHLAALMHGREIHGYMIINGLGKDDENGAVDNLLVSNAVMDMYAKCGSMN 372
Query: 76 QAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDC 135
A +FDS S D + NIMI GY + G+A
Sbjct: 373 NALKIFDSMSKKDVASWNIMIMGY--------------------------GMHGYA---- 402
Query: 136 WREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTN 195
EAL +F M PNEVTL V+S+ H G + R L + M F +I T
Sbjct: 403 -LEALGMFSQMCEAEFKPNEVTLVGVLSACNHAGFVSHGR----LFLAQMESTFGVIPT- 456
Query: 196 LLNMYCVCSSLVEARSLFDEMK-------ERNIVSWNVMLNG---FAKAGLVELARELFE 245
+ + CV L A L D + + N V W +L A L E+A
Sbjct: 457 IEHYTCVIDMLGRAGHLEDAYEIVQKMPIQANPVVWRALLGACRLHGNAELAEIAARQVL 516
Query: 246 RIPSKDVVSWGTMIDGYLQVERLSEALTMYRAM 278
++ + S+ M + Y + R E L + + M
Sbjct: 517 QLEPEHCGSYVLMSNVYGVIGRYEEVLEVRKTM 549
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 86/191 (45%), Gaps = 28/191 (14%)
Query: 418 NEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVF 477
N V+ + A L +G+ H ++ + + ++I+MY+KCG + A VF
Sbjct: 10 NVTKCVAFLQSCADHQNLNKGKQLHSLMITYGFSPSPPSITSLINMYSKCGQMGEAILVF 69
Query: 478 Y---HIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCC- 533
Y H R+ V +NAII G +G A+ + Y + + + TF V+ TCC
Sbjct: 70 YDPCHERN----VFAYNAIISGFVSNGLASKGFQFYKKMRLEGVMPDKYTFPCVVRTCCE 125
Query: 534 -------HAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPM 586
H L+ +G +E D+ +V+ + G +EDA++V + +
Sbjct: 126 VMEVKKIHGCLLKMG------------LELDVFVGSALVNTYLKNGSMEDAQKVFGELSI 173
Query: 587 KADVVIWGTLL 597
+ DVV+W ++
Sbjct: 174 R-DVVLWNAMI 183
>gi|147767942|emb|CAN73397.1| hypothetical protein VITISV_016435 [Vitis vinifera]
Length = 929
Score = 330 bits (846), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 203/680 (29%), Positives = 335/680 (49%), Gaps = 82/680 (12%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD------- 82
+ CS G+ ++ + G E N+ ++ S+++++ KCG + A+ F+
Sbjct: 197 FKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDV 256
Query: 83 ----------------------------SCSTLDPVACNIMISGYIRNDRLNDAREVF-- 112
S D V N +ISGY ++ + +A + F
Sbjct: 257 FMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKYFLE 316
Query: 113 -----DKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVH 167
D P VS+T++I G QN EAL VFR M + GV PN +T+AS +S+ +
Sbjct: 317 MGGLKDFKP--NVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTN 374
Query: 168 LGGIWECRMLHGLVIKLM-IDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNV 226
L + R +HG IK+ +D +++ +L++ Y C S+ AR F +K+ ++VSWN
Sbjct: 375 LSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNA 434
Query: 227 MLNGFAKAGLVELARELFERIP----SKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDG 282
ML G+A G E A EL + D+++W ++ G+ Q AL ++ M G
Sbjct: 435 MLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMG 494
Query: 283 IAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLAR 342
+ PN I ++ACG+ G +IH +++ + + + +I Y+ C +
Sbjct: 495 MDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSL---- 550
Query: 343 LQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNM 402
E A +F+ + RDV W+++IS AQ+ +
Sbjct: 551 ---------------------------EVACSVFSELSTRDVVVWNSIISACAQSGRSVN 583
Query: 403 ALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIID 462
AL+L M + V+ N +TMVS A + L++G+ H++++ + + + ++ID
Sbjct: 584 ALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLID 643
Query: 463 MYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNS 522
MY +CGSI + +F + R + WN +I MHG + ++ +K N
Sbjct: 644 MYGRCGSIQKSRRIFDLMPQR--DLVSWNVMISVYGMHGFGMDAVNLFQXFRTMGLKPNH 701
Query: 523 ITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIR 582
ITF +LS C H+GL++ G +YFK MK+ Y ++P ++ Y CMVDLL RAGQ + E I
Sbjct: 702 ITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIE 761
Query: 583 SMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWED 642
MP + + +WG+LL A RIH N ++ E AA+ L L+P + VL++NIY+ AGRWED
Sbjct: 762 KMPFEPNAAVWGSLLGACRIHCNPDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRWED 821
Query: 643 AFSIRKEMRDCGMKRLPGFS 662
A IR M++ G+ + PG S
Sbjct: 822 AAKIRCLMKERGVTKPPGCS 841
Score = 211 bits (537), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 165/689 (23%), Positives = 302/689 (43%), Gaps = 94/689 (13%)
Query: 16 NLQNSDYELAL-VSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLI 74
+L N D + + S L+ C + G Q+H+ + +G++ F+ + L+ +Y + G +
Sbjct: 81 DLTNPDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCV 140
Query: 75 SQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQND 134
A+ MFD S R VF T I M G
Sbjct: 141 EDARRMFDKMS----------------------ERNVFSWTAI------MEMYCGLGD-- 170
Query: 135 CWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIIST 194
+ E +++F M GV P+ V + L + ++ ++ + +G +
Sbjct: 171 -YEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKG 229
Query: 195 NLLNMYCVCSSLVEARSLFDEMKERNI--------------------------------- 221
++L+M+ C + AR F+E++ +++
Sbjct: 230 SILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKP 289
Query: 222 --VSWNVMLNGFAKAGLVELARELFERIP-----SKDVVSWGTMIDGYLQVERLSEALTM 274
V+WN +++G+A++G E A + F + +VVSW +I G Q EAL++
Sbjct: 290 DQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSV 349
Query: 275 YRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKA-GFDCYDFIQATIIHFYA 333
+R M+ +G+ PN + I +SAC G +IH +K D + +++ +YA
Sbjct: 350 FRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYA 409
Query: 334 ACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ----KRDVYSWSA 389
C + +AR +F + + + SWNA++AG+ G E+A +L + M+ + D+ +W+
Sbjct: 410 KCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNG 469
Query: 390 MISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNS 449
+++G+ Q ALE F M G+ PN T+ A LK G+ H YVL N
Sbjct: 470 LVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNH 529
Query: 450 ITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKI 509
I L+ + +A+I MY+ C S+ A VF + R V WN+II A G + L +
Sbjct: 530 IELSTGVGSALISMYSGCDSLEVACSVFSELSTRDVVV--WNSIISACAQSGRSVNALDL 587
Query: 510 YSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHY--GCMVDL 567
++ N+++N++T + L C + G+ + + D ++ ++D+
Sbjct: 588 LREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIH---QFIIRCGLDTCNFILNSLIDM 644
Query: 568 LGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLA-----GLQPS 622
GR G ++ + + MP + D+V W +++ +HG G A GL+P+
Sbjct: 645 YGRCGSIQKSRRIFDLMPQR-DLVSWNVMISVYGMHG---FGMDAVNLFQXFRTMGLKPN 700
Query: 623 HGPSRVLLSNIYADAGRWEDAFSIRKEMR 651
H LLS + +G E+ + K M+
Sbjct: 701 HITFTNLLSAC-SHSGLIEEGWKYFKMMK 728
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 146/336 (43%), Gaps = 66/336 (19%)
Query: 29 ALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLD 88
AL C + G++IH + ++ +E +T + ++LI++Y+ C + A S+F ST D
Sbjct: 505 ALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTRD 564
Query: 89 PVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRI 148
V N +IS C S S+ AL++ R+M +
Sbjct: 565 VVVWNSIISA--------------------CAQSGRSV-----------NALDLLREMNL 593
Query: 149 LGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVE 208
V N VT+ S + + L + + + +H +I+ +D I +L++MY C S+ +
Sbjct: 594 SNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQK 653
Query: 209 ARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERL 268
+R +FD M +R++VSWNVM++ + G A LF+
Sbjct: 654 SRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQ----------------------- 690
Query: 269 SEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSII-VKAGFDCYDFIQAT 327
+R M G+ PN + +L+SAC + EG + ++ + D A
Sbjct: 691 -----XFRTM---GLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYAC 742
Query: 328 IIHFYAACGRINLARLQF--ELGIKDHIASWNALIA 361
++ + G+ N L+F ++ + + A W +L+
Sbjct: 743 MVDLLSRAGQFN-ETLEFIEKMPFEPNAAVWGSLLG 777
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 109/243 (44%), Gaps = 38/243 (15%)
Query: 13 QKANLQNSDYE-LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKC 71
++ NL N + + +VSAL CS A+ QG++IH I + GL++ FI NSLI++Y +C
Sbjct: 589 REMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRC 648
Query: 72 GLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFA 131
G I +++ +FD D V+ N+MIS Y + GF
Sbjct: 649 GSIQKSRRIFDLMPQRDLVSWNVMISVY--------------------------GMHGFG 682
Query: 132 QNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWEC-RMLHGLVIKLMIDGFV 190
+A+ +F+ R +G+ PN +T +++S+ H G I E + + + +D V
Sbjct: 683 M-----DAVNLFQXFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAV 737
Query: 191 IISTNLLNMYCVCSSLVEARSLFDEMK-ERNIVSWNVMLNG---FAKAGLVEL-ARELFE 245
++++ E ++M E N W +L L E AR LFE
Sbjct: 738 EQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGACRIHCNPDLAEYAARYLFE 797
Query: 246 RIP 248
P
Sbjct: 798 LEP 800
>gi|297800728|ref|XP_002868248.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314084|gb|EFH44507.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 725
Score = 330 bits (846), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 171/551 (31%), Positives = 305/551 (55%), Gaps = 35/551 (6%)
Query: 115 TPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWEC 174
+P+ + + S++ +++ R + ++ +R +G + ++ ++ + + ++E
Sbjct: 74 SPLPESIVFNSLLRDLSRSGEPRATILFYQRIRHVGGRFDRISFPPILKAVSKVSALFEG 133
Query: 175 RMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKA 234
LHG K+ + T L++MY C
Sbjct: 134 MELHGFAFKIATLSDPFVETGLMDMYAAC------------------------------- 162
Query: 235 GLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLI 294
G + AR +F+ + +DVV+W TMI+ Y + L EA ++ M + P+++++ +++
Sbjct: 163 GRINYARNVFDEMSQRDVVTWNTMIERYCRFGLLDEAFKLFEEMKDSNVMPDEMILCNIV 222
Query: 295 SACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQF-ELGIKDHI 353
SACGR I+ +++ + ++ YA G +++A F ++ +++
Sbjct: 223 SACGRTGNMRYNRAIYDFLIENDVRMDTHLLTALVTMYAGAGCMDMAMEFFRKMSVRNLF 282
Query: 354 ASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDA 413
S A+++G+ + G ++DAR +F+ + +D+ W+ MIS YA+++ P AL +F M +
Sbjct: 283 VS-TAMVSGYSKAGRLDDARVIFDQTEMKDLVCWTTMISAYAESDHPQEALRVFEEMCCS 341
Query: 414 GVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTA 473
G+KP+ +TM+SV A + GTL + +W H Y N + + A+I+MYAKCG ++ A
Sbjct: 342 GIKPDVVTMLSVISACVNLGTLDKAKWVHRYTHLNGLESVLPIDNALINMYAKCGGLDAA 401
Query: 474 FEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCC 533
+VF + R +V W+++I AMHG+A+ +L +++ +++ N++ N +TF+GVL C
Sbjct: 402 RDVFEKMPTR--NVVSWSSMINAFAMHGEASDSLSLFAQMKQENVEPNEVTFVGVLYGCS 459
Query: 534 HAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIW 593
H+GLV+ G++ F SM YN+ P ++HYGCMVDL GRA L +A EVI SMPM +VVIW
Sbjct: 460 HSGLVEEGKKIFASMTDEYNITPKIEHYGCMVDLFGRANLLREALEVIESMPMAPNVVIW 519
Query: 594 GTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDC 653
G+L++A R+HG +E+GE AAK + L+P H + VL+SNIYA RW+ IR M
Sbjct: 520 GSLMSACRVHGELELGELAAKRILKLEPDHDGALVLMSNIYAREYRWDYVRIIRWIMEKK 579
Query: 654 GMKRLPGFSGV 664
+ + G S +
Sbjct: 580 KVFKEKGLSRI 590
Score = 172 bits (435), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 123/477 (25%), Positives = 216/477 (45%), Gaps = 64/477 (13%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
L+ S A+ +G ++H FK S+ F++ L+++YA CG I+ A+++FD S D
Sbjct: 121 LKAVSKVSALFEGMELHGFAFKIATLSDPFVETGLMDMYAACGRINYARNVFDEMSQRDV 180
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
V N MI Y R L+ EA ++F +M+
Sbjct: 181 VTWNTMIERYCRFGLLD-------------------------------EAFKLFEEMKDS 209
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
V+P+E+ L +++S+ G + R ++ +I+ + + T L+ MY + A
Sbjct: 210 NVMPDEMILCNIVSACGRTGNMRYNRAIYDFLIENDVRMDTHLLTALVTMYAGAGCMDMA 269
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLS 269
F +M RN+ M++G++KAG ++ AR +F++ KD+V W TMI Y + +
Sbjct: 270 MEFFRKMSVRNLFVSTAMVSGYSKAGRLDDARVIFDQTEMKDLVCWTTMISAYAESDHPQ 329
Query: 270 EALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATII 329
EAL ++ M C GI P+ V ++ +ISAC + +H G + I +I
Sbjct: 330 EALRVFEEMCCSGIKPDVVTMLSVISACVNLGTLDKAKWVHRYTHLNGLESVLPIDNALI 389
Query: 330 HFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSA 389
+ YA CG ++ AR FE ++ SW+++I F +G D+ LF
Sbjct: 390 NMYAKCGGLDAARDVFEKMPTRNVVSWSSMINAFAMHGEASDSLSLF------------- 436
Query: 390 MISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNN- 448
AQ +Q N V+PNE+T V V + SG ++EG+ + +
Sbjct: 437 -----AQMKQEN-------------VEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEY 478
Query: 449 SITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANL 505
+IT ++D++ + + A EV + +V W +++ +HG+ L
Sbjct: 479 NITPKIEHYGCMVDLFGRANLLREALEVIESM-PMAPNVVIWGSLMSACRVHGELEL 534
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 102/377 (27%), Positives = 178/377 (47%), Gaps = 48/377 (12%)
Query: 3 LDHFHSVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQN 62
LD +F K + D E+ L + + C + + I+ + ++ + +T +
Sbjct: 196 LDEAFKLFEEMKDSNVMPD-EMILCNIVSACGRTGNMRYNRAIYDFLIENDVRMDTHLLT 254
Query: 63 SLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVS 122
+L+ +YA G + A F S + M+SGY + RL+DAR +FD+T +K V
Sbjct: 255 ALVTMYAGAGCMDMAMEFFRKMSVRNLFVSTAMVSGYSKAGRLDDARVIFDQTEMKDLVC 314
Query: 123 YTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVI 182
+T+MI +A++D +EAL VF +M G+ P+ VT+ SVIS+ V+LG + + + +H
Sbjct: 315 WTTMISAYAESDHPQEALRVFEEMCCSGIKPDVVTMLSVISACVNLGTLDKAKWVHRYTH 374
Query: 183 KLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARE 242
++ + I L+NMY C L AR +F++M RN+VSW+ M+N FA G
Sbjct: 375 LNGLESVLPIDNALINMYAKCGGLDAARDVFEKMPTRNVVSWSSMINAFAMHG------- 427
Query: 243 LFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMA 302
S++L+++ M + + PN+V V ++ C +
Sbjct: 428 ------------------------EASDSLSLFAQMKQENVEPNEVTFVGVLYGCSHSGL 463
Query: 303 FGEGLQIHSIIVKAGFDCYDFIQATIIHFYAAC-----GRINLARLQFE----LGIKDHI 353
EG +I + + D Y+ I I H+ C GR NL R E + + ++
Sbjct: 464 VEEGKKIFASMT----DEYN-ITPKIEHY--GCMVDLFGRANLLREALEVIESMPMAPNV 516
Query: 354 ASWNALIAGFIRNGMIE 370
W +L++ +G +E
Sbjct: 517 VIWGSLMSACRVHGELE 533
>gi|147770365|emb|CAN78152.1| hypothetical protein VITISV_040250 [Vitis vinifera]
Length = 606
Score = 330 bits (846), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 170/428 (39%), Positives = 252/428 (58%), Gaps = 4/428 (0%)
Query: 240 ARELFERIPSK--DVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISAC 297
A+++FE + + + W + + + + +A+ ++ + + P+ ++ AC
Sbjct: 79 AQQIFECVEKQKPETFVWNSCLKALAEGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLRAC 138
Query: 298 GRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWN 357
+ G +H ++ K GF ++Q I+H YA+CG + ARL FE + + +WN
Sbjct: 139 LNLLDLSNGRILHGVVEKVGFRSNLYLQNMIVHLYASCGEMGEARLLFEKMPQRDVVTWN 198
Query: 358 ALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKP 417
+IA I+ G E A LF+ M +R+V SW++MI+GY Q + A+ LF M +AGVK
Sbjct: 199 IMIAQLIKQGDHEGAYDLFSRMPERNVRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKC 258
Query: 418 NEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVF 477
NE+T+V+V A A G L G HEY + N +S +IDMY KCG + A +VF
Sbjct: 259 NEVTVVAVLAACADLGALDLGMRIHEYSNRHGFKRNVRISNTLIDMYVKCGCLEEACKVF 318
Query: 478 YHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGL 537
+ +RT V W+A+I GLAMHG A L+++SD+ + I+ N +TFIG+L C H GL
Sbjct: 319 EEMEERT--VVSWSAMIGGLAMHGRAEEALRLFSDMSQVGIEPNGVTFIGLLHACSHMGL 376
Query: 538 VDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLL 597
+ G R+F SM Y + P ++HYGCMVDLL RAG L +A E I +MPMK + V+WG LL
Sbjct: 377 ISEGRRFFASMTRDYGIIPQIEHYGCMVDLLSRAGLLHEAHEFILNMPMKPNGVVWGALL 436
Query: 598 AASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKR 657
A R+H NVE+ E A K L L P + V+LSNIYA+AGRWED +RK M+D +K+
Sbjct: 437 GACRVHKNVEMAEEAIKHLLELDPLNDGYYVVLSNIYAEAGRWEDTARVRKFMKDRQVKK 496
Query: 658 LPGFSGVV 665
PG+S +
Sbjct: 497 TPGWSSIT 504
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 109/428 (25%), Positives = 204/428 (47%), Gaps = 34/428 (7%)
Query: 123 YTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVI 182
+ S + A+ D +A+ +F +R V P+ T +SV+ + ++L + R+LHG+V
Sbjct: 96 WNSCLKALAEGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLRACLNLLDLSNGRILHGVVE 155
Query: 183 KLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARE 242
K+ + + ++++Y C + EAR LF++M +R++V+WN+M+ K G E A +
Sbjct: 156 KVGFRSNLYLQNMIVHLYASCGEMGEARLLFEKMPQRDVVTWNIMIAQLIKQGDHEGAYD 215
Query: 243 LFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMA 302
LF R+P ++V SW +MI GY+Q + EA+ ++ M G+ N+V +V +++AC A
Sbjct: 216 LFSRMPERNVRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGA 275
Query: 303 FGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAG 362
G++IH + GF I T+I Y CG + A FE + + SW+A+I G
Sbjct: 276 LDLGMRIHEYSNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMIGG 335
Query: 363 FIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITM 422
+G E+A +LF++M + G++PN +T
Sbjct: 336 LAMHGRAEEALRLFSDMSQ-------------------------------VGIEPNGVTF 364
Query: 423 VSVFCAIASSGTLKEG-RWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIR 481
+ + A + G + EG R+ + I ++D+ ++ G ++ A E ++
Sbjct: 365 IGLLHACSHMGLISEGRRFFASMTRDYGIIPQIEHYGCMVDLLSRAGLLHEAHEFILNMP 424
Query: 482 DRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLG 541
+ V W A++ +H + + + L + + LN ++ + + AG +
Sbjct: 425 MKPNGVV-WGALLGACRVHKNVEMAEEAIKHLLELD-PLNDGYYVVLSNIYAEAGRWEDT 482
Query: 542 ERYFKSMK 549
R K MK
Sbjct: 483 ARVRKFMK 490
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 119/475 (25%), Positives = 196/475 (41%), Gaps = 99/475 (20%)
Query: 28 SALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTL 87
S LR C + +S G+ +H ++ K G SN ++QN +++LYA CG + +A+ +F+
Sbjct: 133 SVLRACLNLLDLSNGRILHGVVEKVGFRSNLYLQNMIVHLYASCGEMGEARLLFEKMPQR 192
Query: 88 DPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMR 147
D V NIMI+ I+ A ++F + P + S+TSMI G+ Q +EA+ +F M
Sbjct: 193 DVVTWNIMIAQLIKQGDHEGAYDLFSRMPERNVRSWTSMIAGYVQCGKAKEAIHLFAKME 252
Query: 148 ILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLV 207
GV NEVT+ +V+++ LG + +H + V IS L++MY C L
Sbjct: 253 EAGVKCNEVTVVAVLAACADLGALDLGMRIHEYSNRHGFKRNVRISNTLIDMYVKCGCLE 312
Query: 208 EARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVER 267
EA +F+EM+ER +VSW+ M+ G A G R
Sbjct: 313 EACKVFEEMEERTVVSWSAMIGGLAMHG-------------------------------R 341
Query: 268 LSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQAT 327
EAL ++ M GI PN V + L+ AC EG +
Sbjct: 342 AEEALRLFSDMSQVGIEPNGVTFIGLLHACSHMGLISEGRR------------------- 382
Query: 328 IIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ-KRDVYS 386
F+A+ R + GI I + ++ R G++ +A + NM K +
Sbjct: 383 ---FFASMTR--------DYGIIPQIEHYGCMVDLLSRAGLLHEAHEFILNMPMKPNGVV 431
Query: 387 WSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVL 446
W A++ ++ MA E +++ + P
Sbjct: 432 WGALLGACRVHKNVEMAEEAIKHLLE--LDP----------------------------- 460
Query: 447 NNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSP-WNAIICGLAMH 500
LND + ++YA+ G V ++DR +P W++I +H
Sbjct: 461 -----LNDGYYVVLSNIYAEAGRWEDTARVRKFMKDRQVKKTPGWSSITVDGVVH 510
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 103/254 (40%), Gaps = 65/254 (25%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E+ +V+ L C+ A+ G +IH + G + N I N+LI++Y KCG
Sbjct: 260 EVTVVAVLAACADLGALDLGMRIHEYSNRHGFKRNVRISNTLIDMYVKCGC--------- 310
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
L +A +VF++ + VS+++MI G A + EAL +
Sbjct: 311 ----------------------LEEACKVFEEMEERTVVSWSAMIGGLAMHGRAEEALRL 348
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
F DM +G+ PN VT ++ + H+G I E R M + II
Sbjct: 349 FSDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRF----FASMTRDYGIIP--------- 395
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSK-DVVSWGTMIDG 261
I + M++ ++AGL+ A E +P K + V WG ++
Sbjct: 396 -----------------QIEHYGCMVDLLSRAGLLHEAHEFILNMPMKPNGVVWGALLGA 438
Query: 262 ---YLQVERLSEAL 272
+ VE EA+
Sbjct: 439 CRVHKNVEMAEEAI 452
>gi|225435852|ref|XP_002265253.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 972
Score = 330 bits (846), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 203/680 (29%), Positives = 335/680 (49%), Gaps = 82/680 (12%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD------- 82
+ CS G+ ++ + G E N+ ++ S+++++ KCG + A+ F+
Sbjct: 197 FKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEEIEFKDV 256
Query: 83 ----------------------------SCSTLDPVACNIMISGYIRNDRLNDAREVF-- 112
S D V N +ISGY ++ + +A + F
Sbjct: 257 FMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEEASKYFLE 316
Query: 113 -----DKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVH 167
D P VS+T++I G QN EAL VFR M + GV PN +T+AS +S+ +
Sbjct: 317 MGGLKDFKP--NVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTN 374
Query: 168 LGGIWECRMLHGLVIKLM-IDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNV 226
L + R +HG IK+ +D +++ +L++ Y C S+ AR F +K+ ++VSWN
Sbjct: 375 LSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNA 434
Query: 227 MLNGFAKAGLVELARELFERIP----SKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDG 282
ML G+A G E A EL + D+++W ++ G+ Q AL ++ M G
Sbjct: 435 MLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMG 494
Query: 283 IAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLAR 342
+ PN I ++ACG+ G +IH +++ + + + +I Y+ C +
Sbjct: 495 MDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSL---- 550
Query: 343 LQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNM 402
E A +F+ + RDV W+++IS AQ+ +
Sbjct: 551 ---------------------------EVACSVFSELSTRDVVVWNSIISACAQSGRSVN 583
Query: 403 ALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIID 462
AL+L M + V+ N +TMVS A + L++G+ H++++ + + + ++ID
Sbjct: 584 ALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLID 643
Query: 463 MYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNS 522
MY +CGSI + +F + R + WN +I MHG + ++ +K N
Sbjct: 644 MYGRCGSIQKSRRIFDLMPQR--DLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNH 701
Query: 523 ITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIR 582
ITF +LS C H+GL++ G +YFK MK+ Y ++P ++ Y CMVDLL RAGQ + E I
Sbjct: 702 ITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIE 761
Query: 583 SMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWED 642
MP + + +WG+LL A RIH N ++ E AA+ L L+P + VL++NIY+ AGRWED
Sbjct: 762 KMPFEPNAAVWGSLLGACRIHCNPDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRWED 821
Query: 643 AFSIRKEMRDCGMKRLPGFS 662
A IR M++ G+ + PG S
Sbjct: 822 AAKIRCLMKERGVTKPPGCS 841
Score = 211 bits (538), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 165/689 (23%), Positives = 302/689 (43%), Gaps = 94/689 (13%)
Query: 16 NLQNSDYELAL-VSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLI 74
+L N D + + S L+ C + G Q+H+ + +G++ F+ + L+ +Y + G +
Sbjct: 81 DLTNPDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCV 140
Query: 75 SQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQND 134
A+ MFD S R VF T I M G
Sbjct: 141 EDARRMFDKMS----------------------ERNVFSWTAI------MEMYCGLGD-- 170
Query: 135 CWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIIST 194
+ E +++F M GV P+ V + L + ++ ++ + +G +
Sbjct: 171 -YEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKG 229
Query: 195 NLLNMYCVCSSLVEARSLFDEMKERNI--------------------------------- 221
++L+M+ C + AR F+E++ +++
Sbjct: 230 SILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKP 289
Query: 222 --VSWNVMLNGFAKAGLVELARELFERIP-----SKDVVSWGTMIDGYLQVERLSEALTM 274
V+WN +++G+A++G E A + F + +VVSW +I G Q EAL++
Sbjct: 290 DQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSV 349
Query: 275 YRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKA-GFDCYDFIQATIIHFYA 333
+R M+ +G+ PN + I +SAC G +IH +K D + +++ +YA
Sbjct: 350 FRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYA 409
Query: 334 ACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ----KRDVYSWSA 389
C + +AR +F + + + SWNA++AG+ G E+A +L + M+ + D+ +W+
Sbjct: 410 KCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNG 469
Query: 390 MISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNS 449
+++G+ Q ALE F M G+ PN T+ A LK G+ H YVL N
Sbjct: 470 LVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNH 529
Query: 450 ITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKI 509
I L+ + +A+I MY+ C S+ A VF + R V WN+II A G + L +
Sbjct: 530 IELSTGVGSALISMYSGCDSLEVACSVFSELSTRDVVV--WNSIISACAQSGRSVNALDL 587
Query: 510 YSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHY--GCMVDL 567
++ N+++N++T + L C + G+ + + D ++ ++D+
Sbjct: 588 LREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIH---QFIIRCGLDTCNFILNSLIDM 644
Query: 568 LGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLA-----GLQPS 622
GR G ++ + + MP + D+V W +++ +HG G A GL+P+
Sbjct: 645 YGRCGSIQKSRRIFDLMPQR-DLVSWNVMISVYGMHG---FGMDAVNLFQQFRTMGLKPN 700
Query: 623 HGPSRVLLSNIYADAGRWEDAFSIRKEMR 651
H LLS + +G E+ + K M+
Sbjct: 701 HITFTNLLSAC-SHSGLIEEGWKYFKMMK 728
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 114/522 (21%), Positives = 214/522 (40%), Gaps = 108/522 (20%)
Query: 29 ALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLD 88
AL C + G++IH + ++ +E +T + ++LI++Y+ C + A S+F ST D
Sbjct: 505 ALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTRD 564
Query: 89 PVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRI 148
V N +IS C S S+ AL++ R+M +
Sbjct: 565 VVVWNSIISA--------------------CAQSGRSV-----------NALDLLREMNL 593
Query: 149 LGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVE 208
V N VT+ S + + L + + + +H +I+ +D I +L++MY C S+ +
Sbjct: 594 SNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQK 653
Query: 209 ARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERL 268
+R +FD M +R++VSWNVM++ + G A LF++
Sbjct: 654 SRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQ---------------------- 691
Query: 269 SEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSII-VKAGFDCYDFIQAT 327
+R M G+ PN + +L+SAC + EG + ++ + D A
Sbjct: 692 ------FRTM---GLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYAC 742
Query: 328 IIHFYAACGRINLARLQF--ELGIKDHIASWNALIAG---FIRNGMIEDARQLFNNMQKR 382
++ + G+ N L+F ++ + + A W +L+ + E A + ++ +
Sbjct: 743 MVDLLSRAGQFN-ETLEFIEKMPFEPNAAVWGSLLGACRIHCNPDLAEYAARYLFELEPQ 801
Query: 383 DVYSWSAMISGYAQNEQPNMALELFHGMVDAGV-KPNEITMVSVFCAIASSGTLKEGRWA 441
++ M + Y+ + A ++ M + GV KP + + V R
Sbjct: 802 SSGNYVLMANIYSAAGRWEDAAKIRCLMKERGVTKPPGCSWIEV------------KRKL 849
Query: 442 HEYVL-NNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRD------------------ 482
H +V+ + S L + +SA + +Y I + + ++D
Sbjct: 850 HSFVVGDTSHPLMEQISAKMESLYFDIKEIGYVPDTNFVLQDVDEDEKEFSLCGHSEKIA 909
Query: 483 ------RTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNI 518
TT+ +P II L + GD + K S +EKR+I
Sbjct: 910 LAFGLISTTAGTPLR-IIKNLRVCGDCHSATKFISKVEKRDI 950
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 109/243 (44%), Gaps = 38/243 (15%)
Query: 13 QKANLQNSDYE-LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKC 71
++ NL N + + +VSAL CS A+ QG++IH I + GL++ FI NSLI++Y +C
Sbjct: 589 REMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRC 648
Query: 72 GLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFA 131
G I +++ +FD D V+ N+MIS Y + GF
Sbjct: 649 GSIQKSRRIFDLMPQRDLVSWNVMISVY--------------------------GMHGFG 682
Query: 132 QNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWEC-RMLHGLVIKLMIDGFV 190
+A+ +F+ R +G+ PN +T +++S+ H G I E + + + +D V
Sbjct: 683 M-----DAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAV 737
Query: 191 IISTNLLNMYCVCSSLVEARSLFDEMK-ERNIVSWNVMLNG---FAKAGLVEL-ARELFE 245
++++ E ++M E N W +L L E AR LFE
Sbjct: 738 EQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGACRIHCNPDLAEYAARYLFE 797
Query: 246 RIP 248
P
Sbjct: 798 LEP 800
>gi|356570919|ref|XP_003553630.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Glycine max]
Length = 622
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 173/427 (40%), Positives = 251/427 (58%), Gaps = 2/427 (0%)
Query: 236 LVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLIS 295
L+ A + +I + ++ + +I G E + Y L G+ P+++ L+
Sbjct: 66 LLHYAIRVASQIQNPNLFIYNALIRGCSTSENPENSFHYYIKALRFGLLPDNITHPFLVK 125
Query: 296 ACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIAS 355
AC + G+Q H +K GF+ ++Q +++H YA+ G IN AR F+ + + S
Sbjct: 126 ACAQLENAPMGMQTHGQAIKHGFEQDFYVQNSLVHMYASVGDINAARSVFQRMCRFDVVS 185
Query: 356 WNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGV 415
W +IAG+ R G + AR+LF+ M +R++ +WS MISGYA+N A+E F + GV
Sbjct: 186 WTCMIAGYHRCGDAKSARELFDRMPERNLVTWSTMISGYARNNCFEKAVETFEALQAEGV 245
Query: 416 KPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFE 475
NE MV V + A G L G AHEYV+ N ++LN L A++DMYA+CG++ A
Sbjct: 246 VANETVMVGVISSCAHLGALAMGEKAHEYVMRNKLSLNLILGTAVVDMYARCGNVEKAVM 305
Query: 476 VFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHA 535
VF + ++ V W A+I GLAMHG A L +S++ K+ ITF VL+ C HA
Sbjct: 306 VFEQLPEK--DVLCWTALIAGLAMHGYAEKALWYFSEMAKKGFVPRDITFTAVLTACSHA 363
Query: 536 GLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGT 595
G+V+ G F+SMK + VEP L+HYGCMVDLLGRAG+L AE+ + MP+K + IW
Sbjct: 364 GMVERGLEIFESMKRDHGVEPRLEHYGCMVDLLGRAGKLRKAEKFVLKMPVKPNAPIWRA 423
Query: 596 LLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGM 655
LL A RIH NVEVGER K L +QP + VLLSNIYA A +W+D +R+ M+D G+
Sbjct: 424 LLGACRIHKNVEVGERVGKILLEMQPEYSGHYVLLSNIYARANKWKDVTVMRQMMKDKGV 483
Query: 656 KRLPGFS 662
++ PG+S
Sbjct: 484 RKPPGYS 490
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 91/363 (25%), Positives = 168/363 (46%), Gaps = 35/363 (9%)
Query: 2 PLDHFHSVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQ 61
P + FH + + L + + ++ C+ G Q H K G E + ++Q
Sbjct: 98 PENSFHYYIKALRFGLLPDNITHPFL--VKACAQLENAPMGMQTHGQAIKHGFEQDFYVQ 155
Query: 62 NSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCV 121
NSL+++YA G I+ A+S+F D V+ MI+GY R ARE+FD+ P + V
Sbjct: 156 NSLVHMYASVGDINAARSVFQRMCRFDVVSWTCMIAGYHRCGDAKSARELFDRMPERNLV 215
Query: 122 SYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLV 181
++++MI G+A+N+C+ +A+E F ++ GV+ NE + VISS HLG + H V
Sbjct: 216 TWSTMISGYARNNCFEKAVETFEALQAEGVVANETVMVGVISSCAHLGALAMGEKAHEYV 275
Query: 182 IKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELAR 241
++ + +I+ T +++MY C ++ +A +F+++ E++++ W ++ G A G E
Sbjct: 276 MRNKLSLNLILGTAVVDMYARCGNVEKAVMVFEQLPEKDVLCWTALIAGLAMHGYAE--- 332
Query: 242 ELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAM 301
+AL + M G P D+ +++AC A
Sbjct: 333 ----------------------------KALWYFSEMAKKGFVPRDITFTAVLTACSHAG 364
Query: 302 AFGEGLQI-HSIIVKAGFDCYDFIQATIIHFYAACGRINLA-RLQFELGIKDHIASWNAL 359
GL+I S+ G + ++ G++ A + ++ +K + W AL
Sbjct: 365 MVERGLEIFESMKRDHGVEPRLEHYGCMVDLLGRAGKLRKAEKFVLKMPVKPNAPIWRAL 424
Query: 360 IAG 362
+
Sbjct: 425 LGA 427
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 165/345 (47%), Gaps = 10/345 (2%)
Query: 123 YTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVI 182
Y ++I G + ++ + + G++P+ +T ++ + L HG I
Sbjct: 85 YNALIRGCSTSENPENSFHYYIKALRFGLLPDNITHPFLVKACAQLENAPMGMQTHGQAI 144
Query: 183 KLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARE 242
K + + +L++MY + ARS+F M ++VSW M+ G+ + G + ARE
Sbjct: 145 KHGFEQDFYVQNSLVHMYASVGDINAARSVFQRMCRFDVVSWTCMIAGYHRCGDAKSARE 204
Query: 243 LFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMA 302
LF+R+P +++V+W TMI GY + +A+ + A+ +G+ N+ ++V +IS+C A
Sbjct: 205 LFDRMPERNLVTWSTMISGYARNNCFEKAVETFEALQAEGVVANETVMVGVISSCAHLGA 264
Query: 303 FGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAG 362
G + H +++ + ++ YA CG + A + FE + + W ALIAG
Sbjct: 265 LAMGEKAHEYVMRNKLSLNLILGTAVVDMYARCGNVEKAVMVFEQLPEKDVLCWTALIAG 324
Query: 363 FIRNGMIEDARQLFNNMQK-----RDVYSWSAMISGYAQNEQPNMALELFHGMV-DAGVK 416
+G E A F+ M K RD+ +++A+++ + LE+F M D GV+
Sbjct: 325 LAMHGYAEKALWYFSEMAKKGFVPRDI-TFTAVLTACSHAGMVERGLEIFESMKRDHGVE 383
Query: 417 PNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAII 461
P + C + G + R A ++VL + N + A++
Sbjct: 384 PR---LEHYGCMVDLLGRAGKLRKAEKFVLKMPVKPNAPIWRALL 425
>gi|224124974|ref|XP_002319471.1| predicted protein [Populus trichocarpa]
gi|222857847|gb|EEE95394.1| predicted protein [Populus trichocarpa]
Length = 703
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 208/617 (33%), Positives = 315/617 (51%), Gaps = 53/617 (8%)
Query: 50 FKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAR 109
++S S+ I I+ +A+ G I +A+++FD + + N +++GY N R +A+
Sbjct: 8 YRSYFSSSAAITQCQISYFARLGQIDRARNIFDDLQSKTVTSWNAIVAGYFHNKRPAEAQ 67
Query: 110 EVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLG 169
++FDK P + +S+ ++ G+ +N EA +VF M V+
Sbjct: 68 KLFDKMPERNTISWNGLVSGYVKNGMISEARKVFDKMPERNVVS---------------- 111
Query: 170 GIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLN 229
W M+ G V + +ID EA LF M E+N+VSW VML
Sbjct: 112 --W-TSMVRGYVQEGLID--------------------EAELLFWRMPEKNVVSWTVMLG 148
Query: 230 GFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVM 289
G + G V+ AR LF+ IP KDVV+ MI G RLSEA ++ M N V
Sbjct: 149 GLIEDGRVDEARRLFDMIPVKDVVASTNMIGGLCSEGRLSEAREIFDEM----PQRNVVA 204
Query: 290 IVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGI 349
+IS A + + + + D + ++ Y GRIN A F+
Sbjct: 205 WTSMISG----YAMNNKVDVARKLFEVMPDKNEVTWTAMLKGYTRSGRINEAAELFKAMP 260
Query: 350 KDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHG 409
+A+ N +I GF NG + AR +F+ M+++D +WSA+I Y + AL LF
Sbjct: 261 VKPVAACNGMIMGFGLNGEVGKARWVFDQMKEKDDGTWSALIKIYERKGFELEALALFSL 320
Query: 410 MVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGS 469
M GV+PN +++S+ S +L GR H ++ + L+ +S+ +I MY KCG
Sbjct: 321 MQREGVRPNFPSIISILSVCGSLASLDHGRQVHSQLVRSHFDLDIYVSSVLITMYIKCGD 380
Query: 470 INTAFEVFYHIRDRTTS--VSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIG 527
+ T VF DR +S + WN+II G A HG L+++ ++ + ITFIG
Sbjct: 381 LVTGKRVF----DRFSSKDIVMWNSIIAGYAQHGFGEKALEVFHEMFSSGAAPDEITFIG 436
Query: 528 VLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMK 587
VLS C + G V G F+SMKS Y V+ +HY CMVDLLGRAG+L +A +I +MP++
Sbjct: 437 VLSACGYTGKVKEGLEIFESMKSKYQVDQKTEHYACMVDLLGRAGKLNEAMNLIENMPVE 496
Query: 588 ADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIR 647
AD ++WG LL+A R H N+++ E AAK L L+PS +LLSN+YA RW+D +R
Sbjct: 497 ADAIVWGALLSACRTHKNLDLAEIAAKKLLQLEPSSAGPYILLSNLYASQSRWKDVAELR 556
Query: 648 KEMRDCGMKRLPGFSGV 664
K MR + + PG S +
Sbjct: 557 KTMRARNVSKSPGCSWI 573
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 129/494 (26%), Positives = 232/494 (46%), Gaps = 80/494 (16%)
Query: 49 IFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDA 108
+F E NT N L++ Y K G+IS+A+ +FD + V+ M+ GY++ +++A
Sbjct: 69 LFDKMPERNTISWNGLVSGYVKNGMISEARKVFDKMPERNVVSWTSMVRGYVQEGLIDEA 128
Query: 109 REVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHL 168
+F + P K VS+T M+ G ++ EA R+ +IP +
Sbjct: 129 ELLFWRMPEKNVVSWTVMLGGLIEDGRVDEA------RRLFDMIPVKD------------ 170
Query: 169 GGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVML 228
V+ STN++ C L EAR +FDEM +RN+V+W M+
Sbjct: 171 ---------------------VVASTNMIGGLCSEGRLSEAREIFDEMPQRNVVAWTSMI 209
Query: 229 NGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDV 288
+G+A V++AR+LFE +P K+ V+W M+ GY + R++EA +++AM +A +
Sbjct: 210 SGYAMNNKVDVARKLFEVMPDKNEVTWTAMLKGYTRSGRINEAAELFKAMPVKPVAACNG 269
Query: 289 MIV--DLISACGRAMAFGEGLQ---------IHSIIVKAGFD-----CYDFIQ------- 325
MI+ L G+A + ++ + I + GF+ + +Q
Sbjct: 270 MIMGFGLNGEVGKARWVFDQMKEKDDGTWSALIKIYERKGFELEALALFSLMQREGVRPN 329
Query: 326 -ATIIHFYAACGRI-----------NLARLQFELGIKDHIASWNALIAGFIRNGMIEDAR 373
+II + CG + L R F+L I +++S LI +I+ G + +
Sbjct: 330 FPSIISILSVCGSLASLDHGRQVHSQLVRSHFDLDI--YVSS--VLITMYIKCGDLVTGK 385
Query: 374 QLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSG 433
++F+ +D+ W+++I+GYAQ+ ALE+FH M +G P+EIT + V A +G
Sbjct: 386 RVFDRFSSKDIVMWNSIIAGYAQHGFGEKALEVFHEMFSSGAAPDEITFIGVLSACGYTG 445
Query: 434 TLKEGRWAHEYVLNN-SITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNA 492
+KEG E + + + A ++D+ + G +N A + ++ ++ W A
Sbjct: 446 KVKEGLEIFESMKSKYQVDQKTEHYACMVDLLGRAGKLNEAMNLIENMPVEADAIV-WGA 504
Query: 493 IICGLAMHGDANLT 506
++ H + +L
Sbjct: 505 LLSACRTHKNLDLA 518
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 105/231 (45%), Gaps = 37/231 (16%)
Query: 25 ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSC 84
+++S L C + ++ G+Q+HS + +S + + ++ + LI +Y KCG + K +FD
Sbjct: 332 SIISILSVCGSLASLDHGRQVHSQLVRSHFDLDIYVSSVLITMYIKCGDLVTGKRVFDRF 391
Query: 85 STLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFR 144
S+ D V N +I+GY ++ GF + +ALEVF
Sbjct: 392 SSKDIVMWNSIIAGYAQH--------------------------GFGE-----KALEVFH 420
Query: 145 DMRILGVIPNEVTLASVISSSVHLGGIWE-CRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
+M G P+E+T V+S+ + G + E + + K +D ++++
Sbjct: 421 EMFSSGAAPDEITFIGVLSACGYTGKVKEGLEIFESMKSKYQVDQKTEHYACMVDLLGRA 480
Query: 204 SSLVEARSLFDEMK-ERNIVSWNVMLNGFAKAGLVEL----ARELFERIPS 249
L EA +L + M E + + W +L+ ++L A++L + PS
Sbjct: 481 GKLNEAMNLIENMPVEADAIVWGALLSACRTHKNLDLAEIAAKKLLQLEPS 531
>gi|90657651|gb|ABD96949.1| hypothetical protein [Cleome spinosa]
Length = 639
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 198/626 (31%), Positives = 335/626 (53%), Gaps = 71/626 (11%)
Query: 44 QIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRND 103
QIH+ IF+ GL+ N ++L + C DP G IR
Sbjct: 34 QIHAKIFRVGLQDN---MDTLTKIVLFC---------------TDPS------RGSIRY- 68
Query: 104 RLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVIS 163
A V C V Y MI A+++ +R+ L +F ++R G+ P+ TL V
Sbjct: 69 ----AERVLGFVQSPCLVMYNLMIKAVAKDENFRKVLVLFSELRKQGLNPDNFTLPPVFK 124
Query: 164 SSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVS 223
+ LG + E +HG V+K D CVC+S+
Sbjct: 125 AMGCLGKVVEGEKVHGYVVKSGFDA------------CVCNSV----------------- 155
Query: 224 WNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDG- 282
+ + G +E+A+++F+ IP +DVVSW +I Y+ + +A+ ++R M +
Sbjct: 156 ----MGMYGALGKMEVAKKVFDEIPERDVVSWNVLISSYVGHRKFEDAIAVFRRMRRESN 211
Query: 283 IAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLAR 342
+ ++ +V +SAC G +IH V A + I ++ Y CG ++ AR
Sbjct: 212 LKADEATVVSTLSACSVLRNQEVGEEIHRY-VDAELEMTTKIGNALLDMYCKCGCVDKAR 270
Query: 343 LQF-ELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPN 401
F E+G K+ I W ++++G+ NG +++AR+LF RD+ W+AMI+GY Q +
Sbjct: 271 AIFDEMGNKNVIC-WTSMVSGYASNGSLDEARELFERSPVRDIVLWTAMINGYVQFNLFD 329
Query: 402 MALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAII 461
AL+LF M ++P+ +V++ A +G L++G+W H Y+ NSITL+ + A++
Sbjct: 330 EALKLFRKMQIQRLRPDNFILVTLLKGCAQTGALEQGKWLHGYIHENSITLDRVVGTALV 389
Query: 462 DMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLN 521
D+YAKCG + A EVFY +++R T + W ++I GLA++G + L +S +E+ + +
Sbjct: 390 DVYAKCGCVEKALEVFYEMKERDT--ASWTSVIYGLAVNGMTSKALDFFSQMEEAGFRPD 447
Query: 522 SITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVI 581
ITFIGVL+ C H GLV+ G RYF SM Y ++P +HY C++DLL RAG L++AE ++
Sbjct: 448 DITFIGVLTACNHGGLVEEGRRYFDSMTKTYKIQPKSEHYSCLIDLLCRAGLLDEAELLL 507
Query: 582 RSMPMK-ADVVI--WGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAG 638
+P++ +D+V+ + +LL+A R +GN+++ ER + L ++ LL+++YA A
Sbjct: 508 EMIPIESSDIVVPLYCSLLSACRNYGNLKMSERVGRRLERVEVKDSSVHTLLASVYASAN 567
Query: 639 RWEDAFSIRKEMRDCGMKRLPGFSGV 664
RWED ++R++M++ G+++ PG S +
Sbjct: 568 RWEDVTTVRRKMKELGIRKFPGCSSI 593
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 130/524 (24%), Positives = 237/524 (45%), Gaps = 89/524 (16%)
Query: 13 QKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCG 72
+K L ++ L V C + +G+++H + KSG ++ + NS++ +Y G
Sbjct: 108 RKQGLNPDNFTLPPVFKAMGCLGKVV--EGEKVHGYVVKSGFDA--CVCNSVMGMYGALG 163
Query: 73 LISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQ 132
+ AK +FD D V+ N++IS Y+ + + D
Sbjct: 164 KMEVAKKVFDEIPERDVVSWNVLISSYVGHRKFED------------------------- 198
Query: 133 NDCWREALEVFRDMRILGVIP-NEVTLASVISSSVHLGGIWECRMLH----GLVIKLMID 187
A+ VFR MR + +E T+ S +S+ C +L G I +D
Sbjct: 199 ------AIAVFRRMRRESNLKADEATVVSTLSA---------CSVLRNQEVGEEIHRYVD 243
Query: 188 GFVIISTN----LLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELAREL 243
+ ++T LL+MYC C + +AR++FDEM +N++ W M++G+A G ++ AREL
Sbjct: 244 AELEMTTKIGNALLDMYCKCGCVDKARAIFDEMGNKNVICWTSMVSGYASNGSLDEAREL 303
Query: 244 FERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAF 303
FER P +D+V W MI+GY+Q EAL ++R M + P++ ++V L+ C + A
Sbjct: 304 FERSPVRDIVLWTAMINGYVQFNLFDEALKLFRKMQIQRLRPDNFILVTLLKGCAQTGAL 363
Query: 304 GEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLA-RLQFELGIKDHIASWNALIAG 362
+G +H I + + ++ YA CG + A + +E+ +D ASW ++I G
Sbjct: 364 EQGKWLHGYIHENSITLDRVVGTALVDVYAKCGCVEKALEVFYEMKERD-TASWTSVIYG 422
Query: 363 FIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITM 422
NGM + AL+ F M +AG +P++IT
Sbjct: 423 LAVNGMT-------------------------------SKALDFFSQMEEAGFRPDDITF 451
Query: 423 VSVFCAIASSGTLKEGRWAHEYVLNN-SITLNDNLSAAIIDMYAKCGSINTAFEVFYHIR 481
+ V A G ++EGR + + I + +ID+ + G ++ A + I
Sbjct: 452 IGVLTACNHGGLVEEGRRYFDSMTKTYKIQPKSEHYSCLIDLLCRAGLLDEAELLLEMIP 511
Query: 482 DRTTS--VSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSI 523
++ V + +++ +G+ ++ ++ LE+ +K +S+
Sbjct: 512 IESSDIVVPLYCSLLSACRNYGNLKMSERVGRRLERVEVKDSSV 555
>gi|296085345|emb|CBI29077.3| unnamed protein product [Vitis vinifera]
Length = 671
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 166/423 (39%), Positives = 252/423 (59%), Gaps = 2/423 (0%)
Query: 240 ARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGR 299
A+ +F + + + ++I + EAL +Y ML G+ P+ + +I AC
Sbjct: 119 AKTIFHHLQNPPPSLYNSLIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFVIKACNE 178
Query: 300 AMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNAL 359
+ GL +H+ +VK+GF+C +I +++IH YA + A+ F L + SWNA+
Sbjct: 179 SSVTWFGLLVHTHVVKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVVSWNAM 238
Query: 360 IAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNE 419
I G++++ + AR +F+ M RDV SW+ MI+GYA +PN AL LF M GVKP E
Sbjct: 239 IDGYVKHVEMGHARMVFDRMVCRDVISWNTMINGYAICGKPNEALALFDQMRAVGVKPTE 298
Query: 420 ITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYH 479
T+VS+ A A G L +G H Y+ +N I +N + A++DMYAKCG I+ A +VF
Sbjct: 299 ATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNA 358
Query: 480 IRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVD 539
+ + V WN II G+A+HG+ +++ ++++ ++ N ITF+ +LS C HAG+VD
Sbjct: 359 MESK--DVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVAILSACSHAGMVD 416
Query: 540 LGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAA 599
G++ M S Y +EP ++HYGC++DLL RAG LE+A E+I +MPM+ + G LL
Sbjct: 417 EGQKLLDCMSSSYGIEPKVEHYGCVIDLLARAGFLEEAMELIGTMPMEPNPSALGALLGG 476
Query: 600 SRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLP 659
RIHGN E+GE K L LQP H +LLSNIYA A +W+DA +R M+ G+ ++P
Sbjct: 477 CRIHGNFELGEMVGKRLINLQPCHSGRYILLSNIYAAAKKWDDARKVRNLMKVNGISKVP 536
Query: 660 GFS 662
G S
Sbjct: 537 GVS 539
Score = 162 bits (411), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 104/385 (27%), Positives = 188/385 (48%), Gaps = 35/385 (9%)
Query: 123 YTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVI 182
Y S+I + + EAL ++ M G+ P+ +T VI + W ++H V+
Sbjct: 134 YNSLIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFVIKACNESSVTWFGLLVHTHVV 193
Query: 183 KLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARE 242
K + I ++L+++Y L A+ LF+ R++VSWN M++G+ K + AR
Sbjct: 194 KSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVVSWNAMIDGYVKHVEMGHARM 253
Query: 243 LFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMA 302
+F+R+ +DV+SW TMI+GY + +EAL ++ M G+ P + +V L+SAC A
Sbjct: 254 VFDRMVCRDVISWNTMINGYAICGKPNEALALFDQMRAVGVKPTEATVVSLLSACAHLGA 313
Query: 303 FGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAG 362
+GL +H+ I + + ++ YA CG+I+LA F + +WN +IAG
Sbjct: 314 LDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAG 373
Query: 363 FIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITM 422
+G +++A+QLF M+ +AGV+PN+IT
Sbjct: 374 MAIHGNVKEAQQLFKEMK-------------------------------EAGVEPNDITF 402
Query: 423 VSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLS--AAIIDMYAKCGSINTAFEVFYHI 480
V++ A + +G + EG+ + +++S + + +ID+ A+ G + A E+ +
Sbjct: 403 VAILSACSHAGMVDEGQKLLD-CMSSSYGIEPKVEHYGCVIDLLARAGFLEEAMELIGTM 461
Query: 481 RDRTTSVSPWNAIICGLAMHGDANL 505
+ S A++ G +HG+ L
Sbjct: 462 -PMEPNPSALGALLGGCRIHGNFEL 485
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 96/338 (28%), Positives = 161/338 (47%), Gaps = 61/338 (18%)
Query: 42 GQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIR 101
G +H+ + KSG E +++I +SLI+LYA + AK +F+ CS D V+ N MI GY++
Sbjct: 185 GLLVHTHVVKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVVSWNAMIDGYVK 244
Query: 102 NDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASV 161
+ + AR VFD+ + +S+ +MI G+A EAL +F MR +GV P E T+ S+
Sbjct: 245 HVEMGHARMVFDRMVCRDVISWNTMINGYAICGKPNEALALFDQMRAVGVKPTEATVVSL 304
Query: 162 ISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNI 221
+S+ HLG + + LH + I+ I+ T L++MY C + A +F+ M+ +++
Sbjct: 305 LSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDV 364
Query: 222 VSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCD 281
++WN ++ G A G V+ A++LF + + EA
Sbjct: 365 LAWNTIIAGMAIHGNVKEAQQLF---------------------KEMKEA---------- 393
Query: 282 GIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLA 341
G+ PND+ V ++SAC A EG ++ DC
Sbjct: 394 GVEPNDITFVAILSACSHAGMVDEGQKL--------LDC--------------------- 424
Query: 342 RLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNM 379
+ GI+ + + +I R G +E+A +L M
Sbjct: 425 -MSSSYGIEPKVEHYGCVIDLLARAGFLEEAMELIGTM 461
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 120/273 (43%), Gaps = 48/273 (17%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E +VS L C+ A+ +G +H+ I + +E N+ + +L+++YAKCG IS A +F+
Sbjct: 298 EATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFN 357
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+ + D +A N +I+ G A + +EA ++
Sbjct: 358 AMESKDVLAWNTIIA-------------------------------GMAIHGNVKEAQQL 386
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRML-------HGLVIKLMIDGFVIISTN 195
F++M+ GV PN++T +++S+ H G + E + L +G+ K+ G VI
Sbjct: 387 FKEMKEAGVEPNDITFVAILSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYGCVI---- 442
Query: 196 LLNMYCVCSSLVEARSLFDEMK-ERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVS 254
++ L EA L M E N + +L G G EL + +R+ +
Sbjct: 443 --DLLARAGFLEEAMELIGTMPMEPNPSALGALLGGCRIHGNFELGEMVGKRLINLQPCH 500
Query: 255 WGTMI---DGYLQVERLSEALTMYRAMLCDGIA 284
G I + Y ++ +A + M +GI+
Sbjct: 501 SGRYILLSNIYAAAKKWDDARKVRNLMKVNGIS 533
>gi|326494876|dbj|BAJ94557.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 783
Score = 329 bits (844), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 213/710 (30%), Positives = 329/710 (46%), Gaps = 134/710 (18%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E L SALR C+ A G+Q+H + K GL++N F+ +L+NLYAK G I A S+FD
Sbjct: 137 EFLLASALRACAQSRAARFGEQVHGVAAKLGLDANVFVGTALVNLYAKAGRIDAAMSVFD 196
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+ +PV +I+GY +Q ALE+
Sbjct: 197 ALPARNPVTWTAVITGY-------------------------------SQAGQAGVALEL 225
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
F M + GV P+ LAS S+ LG + R +HG + + + L+++YC
Sbjct: 226 FGRMGLDGVRPDRFVLASAASACSGLGFVEGGRQIHGYAYRTAAESDASVVNALIDLYCK 285
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
CS L+ AR LFD M+ RN+VSW TMI GY
Sbjct: 286 CSRLLLARRLFDSMENRNLVSWT-------------------------------TMIAGY 314
Query: 263 LQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD 322
+Q +EA++M+ + G P+ ++++CG A +G Q+H+ ++KA + +
Sbjct: 315 MQNSLDTEAMSMFWQLSQAGWQPDVFACTSILNSCGSLAAIWQGRQVHAHVIKADLESDE 374
Query: 323 FIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ-- 380
+++ +I YA C + AR FE +D S+NA+I G+ R G + A ++F M+
Sbjct: 375 YVKNALIDMYAKCEHLTEARAVFEALAEDDAISYNAMIEGYARLGDLTGAVEIFGKMRYC 434
Query: 381 -------------------------------------KRDVYSWSAMISGY--------- 394
D+Y+ SA+I Y
Sbjct: 435 SLKPSLLTFVSLLGVSSSRSDLELSKQIHGLIVKSGTSLDLYAGSALIDVYSKFSLVDDA 494
Query: 395 ----------------------AQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASS 432
AQNE+ A++LF + +G+ PNE T V++ ++
Sbjct: 495 KLVFSLMQNRDMVIWNAMIFGLAQNERGEEAVKLFARLRVSGLTPNEFTFVALVTVASTL 554
Query: 433 GTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNA 492
++ G+ H ++ + ++S A+IDMYAKCG I +F + V WN+
Sbjct: 555 ASIFHGQQFHAQIIKAGADSDPHISNALIDMYAKCGFIEEGRLLFESTLGK--DVICWNS 612
Query: 493 IICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVY 552
+I A HG A L ++ +E ++ N +TF+ VLS C HAGLVD G +F SMK+ Y
Sbjct: 613 MISTYAQHGHAEEALHVFGMMEGAGVEPNYVTFVSVLSACAHAGLVDEGLHHFNSMKTKY 672
Query: 553 NVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERA 612
VEP +HY +V+L GR+G+L A+E I MP++ IW +LL+A + GNVE+G A
Sbjct: 673 AVEPGTEHYASVVNLFGRSGKLHAAKEFIERMPIEPVATIWRSLLSACHLFGNVEIGRYA 732
Query: 613 AKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
+ P+ VL+SNIYA G W DA +R+ M G+ + PG+S
Sbjct: 733 TEMALLADPADSGPSVLMSNIYASKGLWADAQKLRQGMDCAGVVKEPGYS 782
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 144/582 (24%), Positives = 246/582 (42%), Gaps = 104/582 (17%)
Query: 46 HSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRL 105
H+ SGL + F+ N L+ Y+K G + A+ +FDS + + V+ IS Y ++ R
Sbjct: 53 HARAVVSGLLPDLFLANLLLRGYSKLGRLGDARRLFDSMPSRNLVSWGSAISMYAQHGRE 112
Query: 106 NDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSS 165
+DA +F P G A D G PNE LAS + +
Sbjct: 113 DDALLLFAAFPSA----------GAASPD---------------GEPPNEFLLASALRAC 147
Query: 166 VHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWN 225
+HG+ KL +D V + T L+N+Y + A S+FD + RN V+W
Sbjct: 148 AQSRAARFGEQVHGVAAKLGLDANVFVGTALVNLYAKAGRIDAAMSVFDALPARNPVTWT 207
Query: 226 VMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAP 285
++ G+++AG +A ELF R M DG+ P
Sbjct: 208 AVITGYSQAGQAGVALELFGR-------------------------------MGLDGVRP 236
Query: 286 NDVMIVDLISACGRAMAFGE-GLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQ 344
+ ++ SAC + F E G QIH + + + +I Y C R+ LAR
Sbjct: 237 DRFVLASAASAC-SGLGFVEGGRQIHGYAYRTAAESDASVVNALIDLYCKCSRLLLARRL 295
Query: 345 FELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMAL 404
F+ ++ SW +IAG+++N + +A +F + +
Sbjct: 296 FDSMENRNLVSWTTMIAGYMQNSLDTEAMSMFWQLSQ----------------------- 332
Query: 405 ELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMY 464
AG +P+ S+ + S + +GR H +V+ + ++ + A+IDMY
Sbjct: 333 --------AGWQPDVFACTSILNSCGSLAAIWQGRQVHAHVIKADLESDEYVKNALIDMY 384
Query: 465 AKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSIT 524
AKC + A VF + + ++S +NA+I G A GD ++I+ + ++K + +T
Sbjct: 385 AKCEHLTEARAVFEALAE-DDAIS-YNAMIEGYARLGDLTGAVEIFGKMRYCSLKPSLLT 442
Query: 525 FIGVLSTCCHAGLVDLGER----YFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEV 580
F+ +L ++L ++ KS S+ DL ++D+ + ++DA+ V
Sbjct: 443 FVSLLGVSSSRSDLELSKQIHGLIVKSGTSL-----DLYAGSALIDVYSKFSLVDDAKLV 497
Query: 581 IRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPS 622
M + D+VIW ++ E GE A K A L+ S
Sbjct: 498 FSLMQNR-DMVIWNAMIFGL---AQNERGEEAVKLFARLRVS 535
>gi|356558692|ref|XP_003547637.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g17630-like [Glycine max]
Length = 696
Score = 329 bits (844), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 197/620 (31%), Positives = 331/620 (53%), Gaps = 25/620 (4%)
Query: 67 LYAKCGLISQAKSMFD----SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCC-- 120
+ +C + QA+ + + + P +I+ Y R L+ AR+VFD P++
Sbjct: 37 FFQRCFTLQQARQLHSQLVLTTAHRLPFLAARLIAVYARFAFLSHARKVFDAIPLESLHH 96
Query: 121 -VSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHG 179
+ + S+I + + ALE++ +MR LG +P+ TL VI + LG + CR++H
Sbjct: 97 LLLWNSIIRANVSHGYHQHALELYVEMRKLGFLPDGFTLPLVIRACSSLGSSYLCRIVHC 156
Query: 180 LVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVEL 239
+++ + + L+ MY + +AR LFD M R+IVSWN M++G+A
Sbjct: 157 HALQMGFRNHLHVVNELVGMYGKLGRMEDARQLFDGMFVRSIVSWNTMVSGYALNRDSLG 216
Query: 240 ARELFERIP----SKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLIS 295
A +F+R+ + V+W +++ + + E L +++ M GI + ++S
Sbjct: 217 ASRVFKRMELEGLQPNSVTWTSLLSSHARCGLYDETLELFKVMRTRGIEIGAEALAVVLS 276
Query: 296 ACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKD-HIA 354
C G +IH +VK G++ Y F++ +I Y + A F L IK+ ++
Sbjct: 277 VCADMAEVDWGKEIHGYVVKGGYEDYLFVKNALIGTYGKHQHMGDAHKVF-LEIKNKNLV 335
Query: 355 SWNALIAGFIRNGMIEDARQLFNNMQKRD----------VYSWSAMISGYAQNEQPNMAL 404
SWNALI+ + +G+ ++A F +M+K D V SWSA+ISG+A + +L
Sbjct: 336 SWNALISSYAESGLCDEAYAAFLHMEKSDSDDHSLVRPNVISWSAVISGFAYKGRGEKSL 395
Query: 405 ELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMY 464
ELF M A V N +T+ SV A L GR H Y + N ++ N + +I+MY
Sbjct: 396 ELFRQMQLAKVMANCVTISSVLSVCAELAALNLGRELHGYAIRNMMSDNILVGNGLINMY 455
Query: 465 AKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSIT 524
KCG VF +I R + WN++I G MHG L+ ++++ + +K ++IT
Sbjct: 456 MKCGDFKEGHLVFDNIEGR--DLISWNSLIGGYGMHGLGENALRTFNEMIRARMKPDNIT 513
Query: 525 FIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSM 584
F+ +LS C HAGLV G F M + + +EP+++HY CMVDLLGRAG L++A +++R+M
Sbjct: 514 FVAILSACSHAGLVAAGRNLFDQMVTEFRIEPNVEHYACMVDLLGRAGLLKEATDIVRNM 573
Query: 585 PMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAF 644
P++ + +WG LL + R++ ++++ E A + L+ S +LLSNIYA GRW+D+
Sbjct: 574 PIEPNEYVWGALLNSCRMYKDMDIVEETASQILTLKSKITGSFMLLSNIYAANGRWDDSA 633
Query: 645 SIRKEMRDCGMKRLPGFSGV 664
+R R G+K++PG S +
Sbjct: 634 RVRVSARTKGLKKIPGQSWI 653
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 121/511 (23%), Positives = 224/511 (43%), Gaps = 57/511 (11%)
Query: 22 YELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMF 81
+ L LV +R CS+ + + +H + G ++ + N L+ +Y K G + A+ +F
Sbjct: 133 FTLPLV--IRACSSLGSSYLCRIVHCHALQMGFRNHLHVVNELVGMYGKLGRMEDARQLF 190
Query: 82 DSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKC----CVSYTSMIMGFAQNDCWR 137
D V+ N M+SGY N A VF + ++ V++TS++ A+ +
Sbjct: 191 DGMFVRSIVSWNTMVSGYALNRDSLGASRVFKRMELEGLQPNSVTWTSLLSSHARCGLYD 250
Query: 138 EALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLL 197
E LE+F+ MR G+ LA V+S + + + +HG V+K + ++ + L+
Sbjct: 251 ETLELFKVMRTRGIEIGAEALAVVLSVCADMAEVDWGKEIHGYVVKGGYEDYLFVKNALI 310
Query: 198 NMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKD------ 251
Y + +A +F E+K +N+VSWN +++ +A++GL + A F + D
Sbjct: 311 GTYGKHQHMGDAHKVFLEIKNKNLVSWNALISSYAESGLCDEAYAAFLHMEKSDSDDHSL 370
Query: 252 ----VVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGL 307
V+SW +I G+ R ++L ++R M + N V I ++S C A G
Sbjct: 371 VRPNVISWSAVISGFAYKGRGEKSLELFRQMQLAKVMANCVTISSVLSVCAELAALNLGR 430
Query: 308 QIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNG 367
++H ++ + +I+ Y CG L F+ + SWN+LI G+ +G
Sbjct: 431 ELHGYAIRNMMSDNILVGNGLINMYMKCGDFKEGHLVFDNIEGRDLISWNSLIGGYGMHG 490
Query: 368 MIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFC 427
+ E+A + FN M+ A +KP+ IT V++
Sbjct: 491 LGENALRTFNE-------------------------------MIRARMKPDNITFVAILS 519
Query: 428 AIASSGTLKEGR-WAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTS 486
A + +G + GR + V I N A ++D+ + G + A ++ R
Sbjct: 520 ACSHAGLVAAGRNLFDQMVTEFRIEPNVEHYACMVDLLGRAGLLKEATDIV-----RNMP 574
Query: 487 VSP----WNAIICGLAMHGDANLTLKIYSDL 513
+ P W A++ M+ D ++ + S +
Sbjct: 575 IEPNEYVWGALLNSCRMYKDMDIVEETASQI 605
>gi|357468161|ref|XP_003604365.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355505420|gb|AES86562.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 874
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 197/643 (30%), Positives = 332/643 (51%), Gaps = 75/643 (11%)
Query: 27 VSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCST 86
+S L C+ ++Q IHS K+GL SN +I
Sbjct: 39 ISLLETCNTMYEINQ---IHSQTIKTGLSSNHLFLTKVI--------------------- 74
Query: 87 LDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDM 146
+ C SG + AR+VFD+ P + +MI G+++ +C + +++ M
Sbjct: 75 ---IFCCTKESGDVYY-----ARKVFDEIPQPSVFIWNTMIKGYSRINCSESGVSLYKLM 126
Query: 147 RILGVIPNEVTLASVISS-----SVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYC 201
+ + P+ T ++ ++ G + +L+ VI +D + + ++++
Sbjct: 127 LVHNIKPDGFTFPFLLKGFTKDMALKYGKV----LLNHAVIHGFLDSNLFVQKGFIHLFS 182
Query: 202 VCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDG 261
+C + AR +FD +V+WNV+L+G+ + E ++ LF + K
Sbjct: 183 LCGLVNYARKIFDMGDGWEVVTWNVVLSGYNRFKRYEESKRLFIEMEKK----------- 231
Query: 262 YLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCY 321
C+ ++PN V +V ++SAC + G I++ +K G
Sbjct: 232 ------------------CECVSPNSVTLVLMLSACSKLKDLVGGKCIYNKYIKEGIVEP 273
Query: 322 DFI-QATIIHFYAACGRINLARLQF-ELGIKDHIASWNALIAGFIRNGMIEDARQLFNNM 379
+ I + +I +A+CG ++ AR F E+ +D + SW +++ GF I+ AR+ F+ M
Sbjct: 274 NLILENALIDMFASCGEMDAARGVFDEMKTRD-VISWTSIVTGFANTCRIDLARKYFDQM 332
Query: 380 QKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGR 439
+RD SW+AMI GY + + L LF M + VKP+E TMVS+ A A G L+ G
Sbjct: 333 PERDYVSWTAMIDGYLRMNRFKEVLTLFRDMQMSNVKPDEFTMVSILTACAHLGALELGE 392
Query: 440 WAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAM 499
WA Y+ N I + + A+IDMY KCG++ A ++F ++ + W A+I GLA
Sbjct: 393 WAKTYIDKNKIKNDTFIGNALIDMYFKCGNVEKAKKIFNEMQKKDKFT--WTAMIVGLAN 450
Query: 500 HGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLK 559
+G L ++S + + ++ + IT+IGV+ C H GLV G+ +F +M + ++P+L
Sbjct: 451 NGHGEEALTMFSYMLEASVTPDEITYIGVMCACTHVGLVAKGKHFFSNMAVQHGIKPNLT 510
Query: 560 HYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGL 619
HYGCMVDLLGRAG L++A EVI +MP+K + ++WG+LL A R+H NV++ E AA + L
Sbjct: 511 HYGCMVDLLGRAGHLKEALEVIMNMPVKPNSIVWGSLLGACRVHKNVQLAEMAANEILEL 570
Query: 620 QPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
+P +G VLL NIYA +W++ ++RK M + G+K++PG S
Sbjct: 571 EPENGAVYVLLCNIYAACKKWKNLHNVRKMMMERGIKKIPGCS 613
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 94/374 (25%), Positives = 179/374 (47%), Gaps = 63/374 (16%)
Query: 20 SDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGL-ESNTFIQNSLINLYAKCGLISQAK 78
S + LV L CS + G+ I++ K G+ E N ++N+LI+++A CG + A+
Sbjct: 236 SPNSVTLVLMLSACSKLKDLVGGKCIYNKYIKEGIVEPNLILENALIDMFASCGEMDAAR 295
Query: 79 SMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWRE 138
+FD T D ++ +++G+ R++ AR+ FD+ P + VS+T+MI G+ + + ++E
Sbjct: 296 GVFDEMKTRDVISWTSIVTGFANTCRIDLARKYFDQMPERDYVSWTAMIDGYLRMNRFKE 355
Query: 139 ALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLN 198
L +FRDM++ V P+E T+ S++++ HLG + + K I I L++
Sbjct: 356 VLTLFRDMQMSNVKPDEFTMVSILTACAHLGALELGEWAKTYIDKNKIKNDTFIGNALID 415
Query: 199 MYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTM 258
MY C ++ +A+ +F+EM++++ +W M+ G A G E
Sbjct: 416 MYFKCGNVEKAKKIFNEMQKKDKFTWTAMIVGLANNGHGE-------------------- 455
Query: 259 IDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGF 318
EALTM+ ML + P+++ + ++ AC H +V G
Sbjct: 456 -----------EALTMFSYMLEASVTPDEITYIGVMCAC-----------THVGLVAKG- 492
Query: 319 DCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNN 378
HF++ N+A + GIK ++ + ++ R G +++A ++ N
Sbjct: 493 ----------KHFFS-----NMA---VQHGIKPNLTHYGCMVDLLGRAGHLKEALEVIMN 534
Query: 379 MQ-KRDVYSWSAMI 391
M K + W +++
Sbjct: 535 MPVKPNSIVWGSLL 548
>gi|147865382|emb|CAN79811.1| hypothetical protein VITISV_018821 [Vitis vinifera]
Length = 871
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 217/662 (32%), Positives = 336/662 (50%), Gaps = 66/662 (9%)
Query: 13 QKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCG 72
Q+ + Y V L+ C + G +H+++F SG E N F+ N L+++Y +CG
Sbjct: 137 QRLGWRPDHYTFPFV--LKACGEIPSFRCGASVHAVVFASGFEWNVFVGNGLVSMYGRCG 194
Query: 73 LISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQ 132
A+ +FD +R + D VS+ S++ + Q
Sbjct: 195 AWENARQVFDE----------------MRERGVGD------------LVSWNSIVAAYMQ 226
Query: 133 NDCWREALEVFRDM-RILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVI 191
A+++F M LG+ P+ V+L +V+ + +G + +HG ++ + V
Sbjct: 227 GGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVF 286
Query: 192 ISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSK- 250
+ +++MY C + EA +F+ MK +++VSWN M+ G+++ G + A LFE+I +
Sbjct: 287 VGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEK 346
Query: 251 ---DVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGL 307
+VV+W +I GY Q EAL ++R ML G PN V +V L+S C A G
Sbjct: 347 IELNVVTWSAVIAGYAQRGLGFEALDVFRQMLLCGSEPNVVTLVSLLSGCASAGTLLHGK 406
Query: 308 QIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNG 367
+ H +K +I +NL E D + NALI + +
Sbjct: 407 ETHCHAIK-------WI-------------LNLD----ENDPGDDLMVINALIDMYSKCK 442
Query: 368 MIEDARQLFNNMQKRD--VYSWSAMISGYAQNEQPNMALELFHGMV--DAGVKPNEITMV 423
+ AR +F+ + +D V +W+ +I G AQ+ + N ALELF M+ D V PN T+
Sbjct: 443 SPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTIS 502
Query: 424 SVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSA-AIIDMYAKCGSINTAFEVFYHIRD 482
A A G L+ GR H YVL N A +IDMY+K G ++ A VF ++
Sbjct: 503 CALMACARLGALRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQ 562
Query: 483 RTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGE 542
R VS W +++ G MHG L+I+ +++K + + +TF+ VL C H+G+VD G
Sbjct: 563 RN-GVS-WTSLMTGYGMHGRGEEALQIFYEMQKVXLVPDGVTFVVVLYACSHSGMVDQGI 620
Query: 543 RYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRI 602
YF M + V P +HY CMVDLL RAG+L++A E+IR MPMK +W LL+A R+
Sbjct: 621 NYFNGMNKDFGVVPGAEHYACMVDLLSRAGRLDEAMELIRGMPMKPTPAVWVALLSACRV 680
Query: 603 HGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
+ NVE+GE AA L L+ + S LLSNIYA+A W+D IR M++ G+K+ PG S
Sbjct: 681 YANVELGEYAANQLLELESGNDGSYTLLSNIYANARCWKDVARIRYLMKNTGIKKRPGCS 740
Query: 663 GV 664
V
Sbjct: 741 WV 742
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 148/322 (45%), Gaps = 41/322 (12%)
Query: 220 NIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAML 279
+I+S + N AKA + + R L S V W +I + + L + L +YR M
Sbjct: 82 HIISMYLTFNSPAKA--LSVLRRLHPS--SHTVFWWNQLIRRSVHLGFLEDVLQLYRRMQ 137
Query: 280 CDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRIN 339
G P+ ++ ACG +F G +H+++ +GF+ F+ ++ Y CG
Sbjct: 138 RLGWRPDHYTFPFVLKACGEIPSFRCGASVHAVVFASGFEWNVFVGNGLVSMYGRCGAWE 197
Query: 340 LARLQF----ELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYA 395
AR F E G+ D + SWN+++A +++ G A ++F M +
Sbjct: 198 NARQVFDEMRERGVGD-LVSWNSIVAAYMQGGDSIRAMKMFERMTE-------------- 242
Query: 396 QNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDN 455
D G++P+ +++V+V A AS G G+ H Y L + + +
Sbjct: 243 ----------------DLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVF 286
Query: 456 LSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEK 515
+ A++DMYAKCG + A +VF R + V WNA++ G + G + L ++ + +
Sbjct: 287 VGNAVVDMYAKCGMMEEANKVFE--RMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIRE 344
Query: 516 RNIKLNSITFIGVLSTCCHAGL 537
I+LN +T+ V++ GL
Sbjct: 345 EKIELNVVTWSAVIAGYAQRGL 366
>gi|222622013|gb|EEE56145.1| hypothetical protein OsJ_05030 [Oryza sativa Japonica Group]
Length = 742
Score = 329 bits (843), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 188/622 (30%), Positives = 324/622 (52%), Gaps = 39/622 (6%)
Query: 45 IHSLIFKSGLESN-TFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRND 103
+H LI K+ L++ TF+ N L+ YAK G +++A+ +FD + N ++S +
Sbjct: 34 VHCLILKTFLQAPPTFLLNHLLTAYAKSGRLARARRVFDEMPDPNLFTRNALLSALAHSR 93
Query: 104 RLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDM-RILGVIPNEVTLASVI 162
+ D +F P + VSY ++I GF+ +++++R + R V P +TL+++I
Sbjct: 94 LVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMI 153
Query: 163 SSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIV 222
+ L +H V++L + + + L++MY + +AR +F EM+ + +V
Sbjct: 154 MVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVV 213
Query: 223 SWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDG 282
+N ++ G + ++E A+ LF+ + +D ++W TM+ G Q EAL ++R M +G
Sbjct: 214 MYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEG 273
Query: 283 IAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLAR 342
+ + +++ACG A EG QIH+ I + ++ F+ + ++ Y+ C I LA
Sbjct: 274 VGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAE 333
Query: 343 LQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNM 402
+F M R++ SW+AMI GY QN
Sbjct: 334 -------------------------------AVFRRMTCRNIISWTAMIVGYGQNACSEE 362
Query: 403 ALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIID 462
A+ F M G+KP++ T+ SV + A+ +L+EG H L + + +S A++
Sbjct: 363 AVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVT 422
Query: 463 MYAKCGSINTAFEVFYHI--RDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKL 520
+Y KCGSI A +F + D+ + W A++ G A G A T+ ++ + +K
Sbjct: 423 LYGKCGSIEDAHRLFDEMSFHDQVS----WTALVTGYAQFGKAKETIDLFEKMLANGLKP 478
Query: 521 NSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEV 580
+ +TFIGVLS C AGLV+ G YF SM+ + + P HY CM+DL R+G+ ++AEE
Sbjct: 479 DGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHGIVPIDDHYTCMIDLYSRSGRFKEAEEF 538
Query: 581 IRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRW 640
I+ MP D W TLL++ R+ GN+E+G+ AA++L P + S VLL +++A G+W
Sbjct: 539 IKQMPHSPDAFGWATLLSSCRLRGNMEIGKWAAENLLETDPQNPASYVLLCSMHAAKGQW 598
Query: 641 EDAFSIRKEMRDCGMKRLPGFS 662
+ +R+ MRD +K+ PG S
Sbjct: 599 TEVAHLRRGMRDRQVKKEPGCS 620
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 114/466 (24%), Positives = 204/466 (43%), Gaps = 66/466 (14%)
Query: 42 GQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIR 101
G +H + + G + F+ + L+++YAK GLI A+ +F V N +I+G +R
Sbjct: 165 GHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITGLLR 224
Query: 102 NDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASV 161
+ DA+ +F + +++T+M+ G QN EAL+VFR MR GV ++ T S+
Sbjct: 225 CKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSI 284
Query: 162 ISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNI 221
+++ L + E + +H + + + V + + L++MY C S+ A ++F M RNI
Sbjct: 285 LTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNI 344
Query: 222 VSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCD 281
+SW M+ G+ + E EA+ + M D
Sbjct: 345 ISWTAMIVGYGQNACSE-------------------------------EAVRAFSEMQMD 373
Query: 282 GIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLA 341
GI P+D + +IS+C + EG Q H + + +G Y + ++ Y CG I A
Sbjct: 374 GIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDA 433
Query: 342 -RLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQP 400
RL E+ D + SW AL+ G YAQ +
Sbjct: 434 HRLFDEMSFHDQV-SWTALVTG-------------------------------YAQFGKA 461
Query: 401 NMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG-RWAHEYVLNNSITLNDNLSAA 459
++LF M+ G+KP+ +T + V A + +G +++G + ++ I D+
Sbjct: 462 KETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHGIVPIDDHYTC 521
Query: 460 IIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANL 505
+ID+Y++ G A E F + W ++ + G+ +
Sbjct: 522 MIDLYSRSGRFKEA-EEFIKQMPHSPDAFGWATLLSSCRLRGNMEI 566
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 97/254 (38%), Gaps = 76/254 (29%)
Query: 13 QKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCG 72
Q ++ D+ L S + C+ ++ +G Q H L SGL + N+L+ LY KCG
Sbjct: 371 QMDGIKPDDFTLG--SVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCG 428
Query: 73 LISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQ 132
I A +FD S D V+ +++GY AQ
Sbjct: 429 SIEDAHRLFDEMSFHDQVSWTALVTGY-------------------------------AQ 457
Query: 133 NDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVII 192
+E +++F M G+ P+ VT V+S+
Sbjct: 458 FGKAKETIDLFEKMLANGLKPDGVTFIGVLSA---------------------------- 489
Query: 193 STNLLNMYCVCSSLVEAR-SLFDEM-KERNIVS----WNVMLNGFAKAGLVELARELFER 246
C + LVE FD M K+ IV + M++ ++++G + A E ++
Sbjct: 490 --------CSRAGLVEKGCDYFDSMQKDHGIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQ 541
Query: 247 IP-SKDVVSWGTMI 259
+P S D W T++
Sbjct: 542 MPHSPDAFGWATLL 555
>gi|357502643|ref|XP_003621610.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496625|gb|AES77828.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 881
Score = 329 bits (843), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 194/644 (30%), Positives = 318/644 (49%), Gaps = 99/644 (15%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
+ SA R C+ A G Q+H+ K+ + + + +++YAKC
Sbjct: 271 QATFASAFRSCAGLSAFELGTQLHAYALKTNFGYDNIVGTATLDMYAKC----------- 319
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
DR+ DAR+VF+ P S+ ++I+G+A+ D EALE+
Sbjct: 320 --------------------DRMVDARKVFNTFPNPTRQSHNALIVGYARQDQVLEALEI 359
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
FR ++ + +E++L+ +++ + G E LHGL +K +D + ++ +L+MY
Sbjct: 360 FRSLQKSYLDFDEISLSGALTACSAIKGYLEGIQLHGLAVKCGLDFNICVANTILDMY-- 417
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
AK G + A +F+ + KD VSW +I +
Sbjct: 418 -----------------------------AKCGALMEACLIFDDMEIKDAVSWNAIIAAH 448
Query: 263 LQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD 322
Q E + E L ++ +ML + P+D ++ AC A G+++H ++K+G
Sbjct: 449 EQNEHVEETLALFVSMLRSTMEPDDYTFGSVVKACAGKKALNYGMEVHGRVIKSGMGLDW 508
Query: 323 FIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKR 382
F+ + II Y CG M+ +A ++ +++R
Sbjct: 509 FVGSAIIDMYCKCG-------------------------------MLVEAEKIHERLEER 537
Query: 383 DVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAH 442
SW+++ISG++ +Q AL F M+ GV P+ T +V A+ T++ G+ H
Sbjct: 538 TTVSWNSIISGFSSEKQGENALSYFSRMLQVGVIPDNFTYATVLDICANLATVELGKQIH 597
Query: 443 EYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHI--RDRTTSVSPWNAIICGLAMH 500
+L + + +++ I+DMY+KCG++ + +F RD T W+A+IC A H
Sbjct: 598 GQILKLQLHSDVYIASTIVDMYSKCGNMQDSRIMFEKAPKRDYVT----WSAMICAYAYH 653
Query: 501 GDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKH 560
G +K++ +++ +N+K N FI VL C H G VD G YF+ M+S Y ++P ++H
Sbjct: 654 GLGEDAIKLFEEMQLQNVKPNHTIFISVLRACAHMGFVDKGLHYFREMRSHYGLDPQMEH 713
Query: 561 YGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQ 620
Y CMVDLLGR+GQ+ +A E+I SMP +AD VIW TLL R+ GNVEV E+AA SL L
Sbjct: 714 YSCMVDLLGRSGQVNEALELIESMPFEADDVIWRTLLGICRLQGNVEVAEKAANSLLQLD 773
Query: 621 PSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
P + VLLSN+YA AG W + IR M++ +K+ PG S +
Sbjct: 774 PQDSSAYVLLSNVYAIAGMWGEVAKIRSFMKNYKLKKEPGCSWI 817
Score = 186 bits (471), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 147/602 (24%), Positives = 260/602 (43%), Gaps = 76/602 (12%)
Query: 1 TPLDHFHSVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFI 60
TP HS+ +N N +L + CS A++ G+Q H+ I +G F+
Sbjct: 20 TPPYAIHSI----SSNQMNPTKKLTFSHIFQKCSNLKAINPGKQAHAQITVTGFVPTVFV 75
Query: 61 QNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCC 120
N L+ Y KC ++ A ++FD D ++ N MI GY + A+ +FD P +
Sbjct: 76 SNCLLQFYCKCLNLNYAFNVFDKMPQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPERDV 135
Query: 121 VSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGL 180
VS+ SM+ + QN R+++E+F MR+L + + T A V+ + + +H L
Sbjct: 136 VSWNSMLSCYLQNGFHRKSIEIFTKMRLLEIQHDYATFAVVLKACTGIEDYGLGLQVHCL 195
Query: 181 VIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELA 240
I++ D V+ T L++MY C L A ++F EM ERN V W+
Sbjct: 196 AIQMGFDSDVVTGTALVDMYSTCKKLDHAFNIFCEMPERNSVCWS--------------- 240
Query: 241 RELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRA 300
+I GY++ +R +E L +Y+ ML +G+ + +C
Sbjct: 241 ----------------AVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQATFASAFRSCAGL 284
Query: 301 MAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALI 360
AF G Q+H+ +K F + + + YA C R+ AR F S NALI
Sbjct: 285 SAFELGTQLHAYALKTNFGYDNIVGTATLDMYAKCDRMVDARKVFNTFPNPTRQSHNALI 344
Query: 361 AGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEI 420
G+ R + +A ++F ++QK + + +EI
Sbjct: 345 VGYARQDQVLEALEIFRSLQK-------------------------------SYLDFDEI 373
Query: 421 TMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVF--Y 478
++ A ++ EG H + + N ++ I+DMYAKCG++ A +F
Sbjct: 374 SLSGALTACSAIKGYLEGIQLHGLAVKCGLDFNICVANTILDMYAKCGALMEACLIFDDM 433
Query: 479 HIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLV 538
I+D + WNAII + TL ++ + + ++ + TF V+ C +
Sbjct: 434 EIKDAVS----WNAIIAAHEQNEHVEETLALFVSMLRSTMEPDDYTFGSVVKACAGKKAL 489
Query: 539 DLG-ERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLL 597
+ G E + + +KS + D ++D+ + G L +AE++ + + V W +++
Sbjct: 490 NYGMEVHGRVIKSGMGL--DWFVGSAIIDMYCKCGMLVEAEKIHERLEERT-TVSWNSII 546
Query: 598 AA 599
+
Sbjct: 547 SG 548
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 79/334 (23%), Positives = 161/334 (48%), Gaps = 41/334 (12%)
Query: 14 KANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGL 73
++ ++ DY S ++ C+ A++ G ++H + KSG+ + F+ +++I++Y KCG+
Sbjct: 466 RSTMEPDDYTFG--SVVKACAGKKALNYGMEVHGRVIKSGMGLDWFVGSAIIDMYCKCGM 523
Query: 74 ISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQN 133
+ +A+ + ++RL + + VS+ S+I GF+
Sbjct: 524 LVEAEKI---------------------HERLEE----------RTTVSWNSIISGFSSE 552
Query: 134 DCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIIS 193
AL F M +GVIP+ T A+V+ +L + + +HG ++KL + V I+
Sbjct: 553 KQGENALSYFSRMLQVGVIPDNFTYATVLDICANLATVELGKQIHGQILKLQLHSDVYIA 612
Query: 194 TNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVV 253
+ +++MY C ++ ++R +F++ +R+ V+W+ M+ +A GL E A +LFE + ++V
Sbjct: 613 STIVDMYSKCGNMQDSRIMFEKAPKRDYVTWSAMICAYAYHGLGEDAIKLFEEMQLQNVK 672
Query: 254 SWGTMIDGYLQ----VERLSEALTMYRAMLCD-GIAPNDVMIVDLISACGRAMAFGEGLQ 308
T+ L+ + + + L +R M G+ P ++ GR+ E L+
Sbjct: 673 PNHTIFISVLRACAHMGFVDKGLHYFREMRSHYGLDPQMEHYSCMVDLLGRSGQVNEALE 732
Query: 309 IHSIIVKAGFDCYDFIQATIIHFYAACGRINLAR 342
+I F+ D I T++ G + +A
Sbjct: 733 ---LIESMPFEADDVIWRTLLGICRLQGNVEVAE 763
>gi|308080264|ref|NP_001183681.1| uncharacterized protein LOC100502275 [Zea mays]
gi|238013832|gb|ACR37951.1| unknown [Zea mays]
gi|413938826|gb|AFW73377.1| hypothetical protein ZEAMMB73_579690 [Zea mays]
Length = 745
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 193/643 (30%), Positives = 331/643 (51%), Gaps = 44/643 (6%)
Query: 25 ALVSALRYCSAHIAVSQGQQIHSLIFKS-GLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
AL+SA H A + +H +I ++ T + N L+ Y K G ++A+ +FD+
Sbjct: 11 ALLSAAARTEPHAAGA----LHCVILRTLPHPPPTHLLNHLLTAYGKAGRHARARRVFDA 66
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
+ N ++S L+D +F + VSY ++I GF+ A+ ++
Sbjct: 67 TPHPNLFTYNALLSTLAHARLLDDMDSLFASMAQRDTVSYNAVIAGFSGGGAHARAVRLY 126
Query: 144 RDMRILG--VIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYC 201
+ G V P+ +T+++++ ++ LG R H +++L + + L+ MY
Sbjct: 127 HTLLRAGSSVRPSRITMSAMVMAASALGDRALGRQFHCQILRLGFGVNAFVGSPLVGMYA 186
Query: 202 VCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDG 261
+ +A+ +FDEM +N+V +N M+ G + +VE AR LFE + +D ++W TM+ G
Sbjct: 187 KMGLIGDAKRVFDEMDGKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDCITWTTMVTG 246
Query: 262 YLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCY 321
+ Q S+AL +R M GIA + +++ACG A +G QIH+ I++ +D
Sbjct: 247 FTQNGLESQALNFFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTHYDDN 306
Query: 322 DFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQK 381
F+ + ++ Y+ C I + A F M
Sbjct: 307 VFVGSALVDMYSKCRSI-------------------------------KPAETAFRRMSC 335
Query: 382 RDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWA 441
+++ SW+A+I GY QN A+ +F M G+ P++ T+ SV + A+ +L+EG
Sbjct: 336 KNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDFTLGSVISSCANLASLEEGAQF 395
Query: 442 HEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHI--RDRTTSVSPWNAIICGLAM 499
H L + + +S A++ +Y KCGSI A +F + D+ + W A++ G A
Sbjct: 396 HCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMLFHDQVS----WTALVTGYAQ 451
Query: 500 HGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLK 559
G A T+ ++ + +++K + +TFIGVLS C AG V+ G YF SM+ + + P
Sbjct: 452 FGRAKETIDLFEKMLAKDVKPDGVTFIGVLSACSRAGFVEKGCSYFHSMQKDHGIVPIDD 511
Query: 560 HYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGL 619
HY CM+DL R+G+L++AEE I+ MPM D + WGTLL+A R+ G++E+G+ AA++L +
Sbjct: 512 HYTCMIDLYSRSGRLKEAEEFIKQMPMHPDAIGWGTLLSACRLRGDMEIGQWAAENLLEI 571
Query: 620 QPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
P + S VLL +++A G W +R+ MRD +K+ PG S
Sbjct: 572 DPQNPASYVLLCSMHATKGNWNQVAQLRRGMRDRQVKKEPGCS 614
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 92/234 (39%), Gaps = 41/234 (17%)
Query: 13 QKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCG 72
Q+ + D+ L S + C+ ++ +G Q H L SGL + N+L+ LY KCG
Sbjct: 365 QRDGIDPDDFTLG--SVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCG 422
Query: 73 LISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQ 132
I A +FD D V+ +++GY + R
Sbjct: 423 SIEDAHRLFDEMLFHDQVSWTALVTGYAQFGRA--------------------------- 455
Query: 133 NDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWE-CRMLHGLVIKLMIDGFVI 191
+E +++F M V P+ VT V+S+ G + + C H + G V
Sbjct: 456 ----KETIDLFEKMLAKDVKPDGVTFIGVLSACSRAGFVEKGCSYFHSMQKD---HGIVP 508
Query: 192 IS---TNLLNMYCVCSSLVEARSLFDEMK-ERNIVSWNVMLNGFAKAGLVELAR 241
I T ++++Y L EA +M + + W +L+ G +E+ +
Sbjct: 509 IDDHYTCMIDLYSRSGRLKEAEEFIKQMPMHPDAIGWGTLLSACRLRGDMEIGQ 562
>gi|242096978|ref|XP_002438979.1| hypothetical protein SORBIDRAFT_10g029325 [Sorghum bicolor]
gi|241917202|gb|EER90346.1| hypothetical protein SORBIDRAFT_10g029325 [Sorghum bicolor]
Length = 723
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 166/494 (33%), Positives = 287/494 (58%), Gaps = 4/494 (0%)
Query: 174 CRMLHGLVIKLMIDGFV-IISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFA 232
CRMLH ++ M+ I++ L++MY +AR FDE+ ++ V W ++ G
Sbjct: 121 CRMLHAACLRTMLPSAARIVANPLIHMYASLGLTDDARRAFDEVPVKDAVVWATVIGGLV 180
Query: 233 KAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVD 292
+ GL++ AR L + P ++VVSW ++I GY + R ++A+ + ML DG+ P++V ++
Sbjct: 181 RWGLLDEARRLLVQAPERNVVSWTSLIAGYSRAGRPADAVYCFNCMLSDGVEPDEVAVIG 240
Query: 293 LISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFE-LGIKD 351
+SAC + G +H ++ K D + T+I YA CG I A+ F+ +G
Sbjct: 241 ALSACSKLKNLEFGRLLHLLVGKKRIQMTDKLVVTLIDMYAKCGDIAQAQAVFDAVGRGQ 300
Query: 352 HIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMV 411
WN +I G+ + G ++ AR LF+ M RDV ++++MI+GY + + AL+LF +
Sbjct: 301 KPEPWNVIIDGYCKLGHVDIARSLFDQMGARDVITFNSMITGYIHSGRLRDALQLFMQLR 360
Query: 412 DAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSIN 471
G++ + T+VS+ A AS G L +GR H + + + L A++DMY KCG ++
Sbjct: 361 RHGMRADNFTVVSLLTACASLGALPQGRALHASIEQRIVEEDVYLVTALVDMYMKCGRVD 420
Query: 472 TAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLST 531
A VF+ + +R V W+A+I GLA +G L+ + +++ + S+T+I VL+
Sbjct: 421 EATAVFHRMGER--DVHTWSAMIAGLAFNGMGMDALESFCQMKRDGFQPTSVTYIAVLTA 478
Query: 532 CCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVV 591
C H+ L++ G ++F M+S++ + P ++HYGCM+DLL R+G L++A ++++MPM+ + V
Sbjct: 479 CSHSSLLNEGRQHFNEMRSLHKLHPQIEHYGCMIDLLARSGLLDEAMHLVQTMPMQPNAV 538
Query: 592 IWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMR 651
IW ++L+A R+H N+++ AA+ L L P V L NIY D+ +W +A IR M
Sbjct: 539 IWASILSACRVHKNIDLARHAAEHLLKLAPEEDAVYVQLYNIYIDSRQWVEAKRIRMLME 598
Query: 652 DCGMKRLPGFSGVV 665
+ G+K+ G+S +
Sbjct: 599 EQGVKKTAGYSSIT 612
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 130/481 (27%), Positives = 238/481 (49%), Gaps = 39/481 (8%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNT-FIQNSLINLYAKCGLISQAKSMFDSCSTLD 88
R C+A + +H+ ++ L S + N LI++YA GL A+ FD D
Sbjct: 109 FRCCAAGAGAGLCRMLHAACLRTMLPSAARIVANPLIHMYASLGLTDDARRAFDEVPVKD 168
Query: 89 PVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRI 148
V +I G +R L++AR + + P + VS+TS+I G+++ +A+ F M
Sbjct: 169 AVVWATVIGGLVRWGLLDEARRLLVQAPERNVVSWTSLIAGYSRAGRPADAVYCFNCMLS 228
Query: 149 LGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVE 208
GV P+EV + +S+ L + R+LH LV K I + L++MY C + +
Sbjct: 229 DGVEPDEVAVIGALSACSKLKNLEFGRLLHLLVGKKRIQMTDKLVVTLIDMYAKCGDIAQ 288
Query: 209 ARSLFDEM-KERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVER 267
A+++FD + + + WNV+++G+ K G V++AR LF+++ ++DV+++ +MI GY+ R
Sbjct: 289 AQAVFDAVGRGQKPEPWNVIIDGYCKLGHVDIARSLFDQMGARDVITFNSMITGYIHSGR 348
Query: 268 LSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQAT 327
L +AL ++ + G+ ++ +V L++AC A +G +H+ I + + ++
Sbjct: 349 LRDALQLFMQLRRHGMRADNFTVVSLLTACASLGALPQGRALHASIEQRIVEEDVYLVTA 408
Query: 328 IIHFYAACGRINLARLQF-ELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYS 386
++ Y CGR++ A F +G +D + +W+A+IAG NGM DA + F M KRD
Sbjct: 409 LVDMYMKCGRVDEATAVFHRMGERD-VHTWSAMIAGLAFNGMGMDALESFCQM-KRD--- 463
Query: 387 WSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVL 446
G +P +T ++V A + S L EGR H +
Sbjct: 464 ---------------------------GFQPTSVTYIAVLTACSHSSLLNEGR-QHFNEM 495
Query: 447 NNSITLNDNLS--AAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDAN 504
+ L+ + +ID+ A+ G ++ A + + + +V W +I+ +H + +
Sbjct: 496 RSLHKLHPQIEHYGCMIDLLARSGLLDEAMHLVQTMPMQPNAVI-WASILSACRVHKNID 554
Query: 505 L 505
L
Sbjct: 555 L 555
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 148/287 (51%), Gaps = 32/287 (11%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E+A++ AL CS + G+ +H L+ K ++ + +LI++YAKCG I+QA+++FD
Sbjct: 235 EVAVIGALSACSKLKNLEFGRLLHLLVGKKRIQMTDKLVVTLIDMYAKCGDIAQAQAVFD 294
Query: 83 SCST-LDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALE 141
+ P N++I GY + ++ AR +FD+ + +++ SMI G+ + R+AL+
Sbjct: 295 AVGRGQKPEPWNVIIDGYCKLGHVDIARSLFDQMGARDVITFNSMITGYIHSGRLRDALQ 354
Query: 142 VFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYC 201
+F +R G+ + T+ S++++ LG + + R LH + + +++ V + T L++MY
Sbjct: 355 LFMQLRRHGMRADNFTVVSLLTACASLGALPQGRALHASIEQRIVEEDVYLVTALVDMYM 414
Query: 202 VCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDG 261
C + EA ++F M ER++ +W+ M+ G A G+ A ++
Sbjct: 415 KCGRVDEATAVFHRMGERDVHTWSAMIAGLAFNGMGMDA------------------LES 456
Query: 262 YLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQ 308
+ Q++R DG P V + +++AC + EG Q
Sbjct: 457 FCQMKR-------------DGFQPTSVTYIAVLTACSHSSLLNEGRQ 490
>gi|222616851|gb|EEE52983.1| hypothetical protein OsJ_35654 [Oryza sativa Japonica Group]
Length = 632
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 177/467 (37%), Positives = 266/467 (56%), Gaps = 35/467 (7%)
Query: 190 VIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPS 249
V++ L++ Y SL +A +FDEM ER++VSW +++G+A+AGL + A LF R+
Sbjct: 178 VLVGNALVHFYANHKSLDDAGKVFDEMPERDVVSWTTLVDGYARAGLADEAWRLFCRM-- 235
Query: 250 KDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQI 309
++ G+ PN V +V +SA G+ G+ +
Sbjct: 236 ----------------------------VVVGGMRPNAVTLVAAVSAIGQMGLLAFGIML 267
Query: 310 HSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFE-LGIKDHIASWNALIAGFIRNGM 368
H + + G + ++ + CG + AR F+ + +KD + SW +++ + + G
Sbjct: 268 HKYVTEGGVARSVNLDNALVDMFGKCGCVRYAREVFDGMEVKD-VYSWTSMVNAYAKCGD 326
Query: 369 IEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCA 428
+E A QLF +M +R+V SWS MI+ Y+Q QP A+ LF M+ AGV P + T+VSV A
Sbjct: 327 LESAEQLFKDMPRRNVVSWSCMIAAYSQLNQPEEAVWLFREMIAAGVDPIDATLVSVLSA 386
Query: 429 IASSGTLKEGRWAHE-YVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSV 487
A G L GRW +E Y+++N I L NL A+IDM+AKCG + A ++F + +R +V
Sbjct: 387 CAQLGCLDLGRWIYENYIVSNKIGLTVNLGNALIDMFAKCGDVGEASKLFDEMAER--NV 444
Query: 488 SPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKS 547
WN +I A+HG + ++++ L+ NI + ITF+G+L++C H+GLV G RYFK
Sbjct: 445 VSWNTMIMAHAVHGQSEEAIRLFEQLKGENIVPDQITFLGLLASCSHSGLVSEGRRYFKE 504
Query: 548 MKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVE 607
M+ Y +EP ++HY CM+DLLG+ G LE+A EV R MPM+AD WG LL A R+HGNVE
Sbjct: 505 MEMFYRIEPRVEHYACMIDLLGKVGLLEEAFEVARGMPMEADEAGWGALLNACRMHGNVE 564
Query: 608 VGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCG 654
+G A L L PS VL+S IYA +W+ +R MRD G
Sbjct: 565 IGACVADKLVELDPSDSGIYVLMSQIYASKNKWDQVKMLRMTMRDRG 611
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 124/415 (29%), Positives = 208/415 (50%), Gaps = 33/415 (7%)
Query: 93 NIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVI 152
N ++ Y + L+DA +VFD+ P + VS+T+++ G+A+ EA +F M ++G +
Sbjct: 182 NALVHFYANHKSLDDAGKVFDEMPERDVVSWTTLVDGYARAGLADEAWRLFCRMVVVGGM 241
Query: 153 -PNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARS 211
PN VTL + +S+ +G + MLH V + + V + L++M+ C + AR
Sbjct: 242 RPNAVTLVAAVSAIGQMGLLAFGIMLHKYVTEGGVARSVNLDNALVDMFGKCGCVRYARE 301
Query: 212 LFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEA 271
+FD M+ +++ SW M+N +AK G +E A +LF+ +P ++VVSW MI Y Q+ + EA
Sbjct: 302 VFDGMEVKDVYSWTSMVNAYAKCGDLESAEQLFKDMPRRNVVSWSCMIAAYSQLNQPEEA 361
Query: 272 LTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHF 331
+ ++R M+ G+ P D +V ++SAC A C D + I
Sbjct: 362 VWLFREMIAAGVDPIDATLVSVLSAC------------------AQLGCLD-LGRWIYEN 402
Query: 332 YAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMI 391
Y +I L LG NALI F + G + +A +LF+ M +R+V SW+ MI
Sbjct: 403 YIVSNKIGLT---VNLG--------NALIDMFAKCGDVGEASKLFDEMAERNVVSWNTMI 451
Query: 392 SGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG-RWAHEYVLNNSI 450
+A + Q A+ LF + + P++IT + + + + SG + EG R+ E + I
Sbjct: 452 MAHAVHGQSEEAIRLFEQLKGENIVPDQITFLGLLASCSHSGLVSEGRRYFKEMEMFYRI 511
Query: 451 TLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANL 505
A +ID+ K G + AFEV + W A++ MHG+ +
Sbjct: 512 EPRVEHYACMIDLLGKVGLLEEAFEVARGMPMEADEAG-WGALLNACRMHGNVEI 565
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 123/235 (52%), Gaps = 7/235 (2%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+ LV+A+ ++ G +H + + G+ + + N+L++++ KCG + A+ +FD
Sbjct: 246 VTLVAAVSAIGQMGLLAFGIMLHKYVTEGGVARSVNLDNALVDMFGKCGCVRYAREVFDG 305
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
D + M++ Y + L A ++F P + VS++ MI ++Q + EA+ +F
Sbjct: 306 MEVKDVYSWTSMVNAYAKCGDLESAEQLFKDMPRRNVVSWSCMIAAYSQLNQPEEAVWLF 365
Query: 144 RDMRILGVIPNEVTLASVISSSVHLG----GIWECRMLHGLVIKLMIDGFVIISTNLLNM 199
R+M GV P + TL SV+S+ LG G W + ++ I V + L++M
Sbjct: 366 REMIAAGVDPIDATLVSVLSACAQLGCLDLGRW---IYENYIVSNKIGLTVNLGNALIDM 422
Query: 200 YCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVS 254
+ C + EA LFDEM ERN+VSWN M+ A G E A LFE++ +++V
Sbjct: 423 FAKCGDVGEASKLFDEMAERNVVSWNTMIMAHAVHGQSEEAIRLFEQLKGENIVP 477
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 96/411 (23%), Positives = 169/411 (41%), Gaps = 75/411 (18%)
Query: 248 PSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLI--------SACGR 299
P + GTM+ G+L+ + AL ++R ++ D + + V + S G
Sbjct: 97 PGPNAYMLGTMMRGFLRARLPARALGLFRRVVRDRLPADARTFVFAVKAAAAAAESEHGG 156
Query: 300 AMAFGEGLQIHSIIVKAGFDCYD-FIQATIIHFYAACGRINLARLQFELGIKDHIASWNA 358
+ GE IH +K GF + ++HFYA ++ A F+ + + SW
Sbjct: 157 TPSGGEA--IHCAALKCGFVGESVLVGNALVHFYANHKSLDDAGKVFDEMPERDVVSWTT 214
Query: 359 LIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPN 418
L+ G+ R G+ ++A +LF M +V G++PN
Sbjct: 215 LVDGYARAGLADEAWRLFCRM------------------------------VVVGGMRPN 244
Query: 419 EITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFY 478
+T+V+ AI G L G H+YV + + NL A++DM+ KCG + A EVF
Sbjct: 245 AVTLVAAVSAIGQMGLLAFGIMLHKYVTEGGVARSVNLDNALVDMFGKCGCVRYAREVFD 304
Query: 479 HIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNI-----------KLNS----- 522
+ V W +++ A GD +++ D+ +RN+ +LN
Sbjct: 305 GM--EVKDVYSWTSMVNAYAKCGDLESAEQLFKDMPRRNVVSWSCMIAAYSQLNQPEEAV 362
Query: 523 ---------------ITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDL 567
T + VLS C G +DLG +++ + + ++D+
Sbjct: 363 WLFREMIAAGVDPIDATLVSVLSACAQLGCLDLGRWIYENYIVSNKIGLTVNLGNALIDM 422
Query: 568 LGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAG 618
+ G + +A ++ M + +VV W T++ A +HG E R + L G
Sbjct: 423 FAKCGDVGEASKLFDEMAER-NVVSWNTMIMAHAVHGQSEEAIRLFEQLKG 472
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 97/244 (39%), Gaps = 77/244 (31%)
Query: 26 LVSALRYCSAHIAVSQGQQIHS---LIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
LVS L C+ + G+ I+ + K GL N + N+LI+++AKCG + +A +FD
Sbjct: 380 LVSVLSACAQLGCLDLGRWIYENYIVSNKIGLTVN--LGNALIDMFAKCGDVGEASKLFD 437
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+ RN VS+ +MIM A + EA+ +
Sbjct: 438 EMAE--------------RN-----------------VVSWNTMIMAHAVHGQSEEAIRL 466
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
F ++ ++P+++T +++S H G ++S
Sbjct: 467 FEQLKGENIVPDQITFLGLLASCSHSG---------------------LVS--------- 496
Query: 203 CSSLVEARSLFDEMK-----ERNIVSWNVMLNGFAKAGLVELARELFERIP-SKDVVSWG 256
E R F EM+ E + + M++ K GL+E A E+ +P D WG
Sbjct: 497 -----EGRRYFKEMEMFYRIEPRVEHYACMIDLLGKVGLLEEAFEVARGMPMEADEAGWG 551
Query: 257 TMID 260
+++
Sbjct: 552 ALLN 555
>gi|357507475|ref|XP_003624026.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124360495|gb|ABN08505.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355499041|gb|AES80244.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 646
Score = 328 bits (842), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 179/480 (37%), Positives = 284/480 (59%), Gaps = 23/480 (4%)
Query: 196 LLNMYCVCSSLVEARSLF----DEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKD 251
+++ Y C + EA +LF D+ RN+++W M+ G AK G ++ AR F+++P +
Sbjct: 171 MISGYWKCGNEEEASTLFHVMGDQEISRNVITWTTMITGHAKKGNLKTARMYFDKMPERS 230
Query: 252 VVSWGTMIDGYLQVERLSEALTMYRAMLCDG-IAPNDVMIVDLISACGRAMAFGEGLQIH 310
VVSW M+ GY Q E + ++ ML G + P++ V +IS+C + G+
Sbjct: 231 VVSWNAMLSGYAQGGAPEETIRLFNDMLSPGNVQPDETTWVTVISSCS---SLGDPCLSE 287
Query: 311 SIIVK----AGFDCYDFIQATIIHFYAACGRINLARLQFE-LGIKDHIAS--WNALIAGF 363
SI+ K GF F++ ++ +A CG + A FE LG+ + +S WNA+I+ +
Sbjct: 288 SIVRKLDDTVGFRPNYFVKTALLDMHAKCGNLEAAHKIFEQLGVYKYRSSVPWNAMISAY 347
Query: 364 IRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDA-GVKPNEITM 422
R G + AR LF+ M +RD SW++MI+GY QN + A++LF M+ + KP+E+TM
Sbjct: 348 ARVGDLPSARHLFDKMPQRDTVSWNSMIAGYTQNGESVKAIKLFEEMISSEDSKPDEVTM 407
Query: 423 VSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRD 482
VSVF A G L G WA + N I ++ ++ ++I MY++CGS+ A +F +
Sbjct: 408 VSVFSACGHLGELGLGNWAVSILKENHIQISISVYNSLISMYSRCGSMQDAVLIFQEMAT 467
Query: 483 RTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGE 542
R + +N +I G A HG ++++ +++ I+ + IT+I +L+ C HAGL+ G+
Sbjct: 468 R--DLVSYNTLISGFAEHGHGMESIELLLKMKEDGIEPDRITYIAILTACSHAGLLGEGQ 525
Query: 543 RYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRI 602
R F+S+K PD+ HY CM+D+LGRAG+LE+A ++I+SMPM+ I+G+LL A+ I
Sbjct: 526 RLFESIKF-----PDVDHYACMIDMLGRAGRLEEAMKLIQSMPMEPHAGIYGSLLNATSI 580
Query: 603 HGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
H VE+GE AA L ++P + + VLLSNIYA AGRW+D +R MR G+K+ G S
Sbjct: 581 HKQVELGELAAAKLFKVEPHNSGNYVLLSNIYASAGRWKDGDKVRDTMRKQGVKKTTGLS 640
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 133/475 (28%), Positives = 221/475 (46%), Gaps = 88/475 (18%)
Query: 49 IFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGY--------- 99
+ KSG + + +++N ++ +YAK G I A+ +FD N+MISGY
Sbjct: 125 VLKSGYDRDHYVRNGILGIYAKYGPIEFARKLFDEMPDRTVADWNVMISGYWKCGNEEEA 184
Query: 100 --------------------------IRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQN 133
+ L AR FDK P + VS+ +M+ G+AQ
Sbjct: 185 STLFHVMGDQEISRNVITWTTMITGHAKKGNLKTARMYFDKMPERSVVSWNAMLSGYAQG 244
Query: 134 DCWREALEVFRDMRILG-VIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMID--GF- 189
E + +F DM G V P+E T +VISS LG C L +++ + D GF
Sbjct: 245 GAPEETIRLFNDMLSPGNVQPDETTWVTVISSCSSLGD--PC--LSESIVRKLDDTVGFR 300
Query: 190 --VIISTNLLNMYCVCSSLVEARSLFDEM---KERNIVSWNVMLNGFAKAGLVELARELF 244
+ T LL+M+ C +L A +F+++ K R+ V WN M++ +A+ G + AR LF
Sbjct: 301 PNYFVKTALLDMHAKCGNLEAAHKIFEQLGVYKYRSSVPWNAMISAYARVGDLPSARHLF 360
Query: 245 ERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAML-CDGIAPNDVMIVDLISACGRAMAF 303
+++P +D VSW +MI GY Q +A+ ++ M+ + P++V +V + SACG
Sbjct: 361 DKMPQRDTVSWNSMIAGYTQNGESVKAIKLFEEMISSEDSKPDEVTMVSVFSACGHLGEL 420
Query: 304 GEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQF-ELGIKDHIASWNALIAG 362
G G SI+ + + ++I Y+ CG + A L F E+ +D + S+N LI+G
Sbjct: 421 GLGNWAVSILKENHIQISISVYNSLISMYSRCGSMQDAVLIFQEMATRD-LVSYNTLISG 479
Query: 363 FIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITM 422
F +G + M+ ++EL M + G++P+ IT
Sbjct: 480 FAEHG---------HGME----------------------SIELLLKMKEDGIEPDRITY 508
Query: 423 VSVFCAIASSGTLKEGRWAHEYVLNNSITLND-NLSAAIIDMYAKCGSINTAFEV 476
+++ A + +G L EG+ E SI D + A +IDM + G + A ++
Sbjct: 509 IAILTACSHAGLLGEGQRLFE-----SIKFPDVDHYACMIDMLGRAGRLEEAMKL 558
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 105/440 (23%), Positives = 192/440 (43%), Gaps = 87/440 (19%)
Query: 242 ELFERIPSKDVVSWGTMIDGYLQVE-RLSEALTMYRAML--CDGIAPNDVMIVDLISACG 298
+F DV + M+ Y Q+ R +++++ ML C+ I PN ++ + G
Sbjct: 57 HIFHAATHPDVRVFTFMLKYYSQIGVRAQVPVSLFKHMLRHCN-IKPNTSFYSVMMKSAG 115
Query: 299 RAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNA 358
E + + ++K+G+D +++ I+ YA G I AR F+ +A WN
Sbjct: 116 -----SESMLFLAHVLKSGYDRDHYVRNGILGIYAKYGPIEFARKLFDEMPDRTVADWNV 170
Query: 359 LIAGF-----------------------------------IRNGMIEDARQLFNNMQKRD 383
+I+G+ + G ++ AR F+ M +R
Sbjct: 171 MISGYWKCGNEEEASTLFHVMGDQEISRNVITWTTMITGHAKKGNLKTARMYFDKMPERS 230
Query: 384 VYSWSAMISGYAQNEQPNMALELFHGMVDAG-VKPNEITMVSVFCAIASSGTLKEGRWAH 442
V SW+AM+SGYAQ P + LF+ M+ G V+P+E T V+V I+S +L + +
Sbjct: 231 VVSWNAMLSGYAQGGAPEETIRLFNDMLSPGNVQPDETTWVTV---ISSCSSLGDPCLSE 287
Query: 443 EYV--LNNSITLNDN--LSAAIIDMYAKCGSINTAFEVFYHIR-DRTTSVSPWNAIICGL 497
V L++++ N + A++DM+AKCG++ A ++F + + S PWNA+I
Sbjct: 288 SIVRKLDDTVGFRPNYFVKTALLDMHAKCGNLEAAHKIFEQLGVYKYRSSVPWNAMISAY 347
Query: 498 AMHGDANLTLKIYSDLEKRNI--------------------------------KLNSITF 525
A GD ++ + +R+ K + +T
Sbjct: 348 ARVGDLPSARHLFDKMPQRDTVSWNSMIAGYTQNGESVKAIKLFEEMISSEDSKPDEVTM 407
Query: 526 IGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMP 585
+ V S C H G + LG +K + ++ + Y ++ + R G ++DA + + M
Sbjct: 408 VSVFSACGHLGELGLGNWAVSILKENH-IQISISVYNSLISMYSRCGSMQDAVLIFQEMA 466
Query: 586 MKADVVIWGTLLAASRIHGN 605
+ D+V + TL++ HG+
Sbjct: 467 TR-DLVSYNTLISGFAEHGH 485
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 90/317 (28%), Positives = 149/317 (47%), Gaps = 48/317 (15%)
Query: 53 GLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTL---DPVACNIMISGYIRNDRLNDAR 109
G N F++ +L++++AKCG + A +F+ V N MIS Y R L AR
Sbjct: 298 GFRPNYFVKTALLDMHAKCGNLEAAHKIFEQLGVYKYRSSVPWNAMISAYARVGDLPSAR 357
Query: 110 EVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDM-RILGVIPNEVTLASVISSSVHL 168
+FDK P + VS+ SMI G+ QN +A+++F +M P+EVT+ SV S+ HL
Sbjct: 358 HLFDKMPQRDTVSWNSMIAGYTQNGESVKAIKLFEEMISSEDSKPDEVTMVSVFSACGHL 417
Query: 169 G----GIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSW 224
G G W +L I++ I + +L++MY C S+ +A +F EM R++VS+
Sbjct: 418 GELGLGNWAVSILKENHIQISIS----VYNSLISMYSRCGSMQDAVLIFQEMATRDLVSY 473
Query: 225 NVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIA 284
N +++GFA+ G E++ + M DGI
Sbjct: 474 NTLISGFAEHG-------------------------------HGMESIELLLKMKEDGIE 502
Query: 285 PNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLA-RL 343
P+ + + +++AC A GEG ++ I D Y A +I GR+ A +L
Sbjct: 503 PDRITYIAILTACSHAGLLGEGQRLFESIKFPDVDHY----ACMIDMLGRAGRLEEAMKL 558
Query: 344 QFELGIKDHIASWNALI 360
+ ++ H + +L+
Sbjct: 559 IQSMPMEPHAGIYGSLL 575
>gi|357151860|ref|XP_003575929.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g14820-like, partial [Brachypodium
distachyon]
Length = 498
Score = 328 bits (842), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 173/488 (35%), Positives = 270/488 (55%), Gaps = 33/488 (6%)
Query: 175 RMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKA 234
R HG+ +++ D + T L+ Y C + EAR +FD M
Sbjct: 13 RGTHGIAVRVGADEDGFVGTALVGAYAACQRVAEARRVFDGM------------------ 54
Query: 235 GLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLI 294
P +D+V+WG M+D Y + E L + M + P+ V++ ++
Sbjct: 55 -------------PERDLVAWGVMLDSYFNTQNYRETLLLLNKMKRSRVVPDQVILATVL 101
Query: 295 SACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIA 354
S CG G IHS I + + + +I+ YA+C + +A + + +
Sbjct: 102 STCGHTRHLRSGKTIHSYIQVSDIFVDARLSSALINMYASCMDMEMADKIYSGMQRKDLV 161
Query: 355 SWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAG 414
S A++ G+ +NG IE AR +FN+M ++DV SWSAMIS YA+N QP+ L LF+ M G
Sbjct: 162 SSTAMVCGYAKNGKIEIARSIFNHMAEKDVVSWSAMISAYAENNQPSEVLNLFNKMQGCG 221
Query: 415 VKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAF 474
V P+EITM+SV A A+ G+L + RW H V N+ ++ A+IDM++KCGS+ A
Sbjct: 222 VSPDEITMLSVISACANIGSLDKARWIHSIVGNHGFYKILSICNALIDMFSKCGSLTLAL 281
Query: 475 EVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCH 534
+F + + +V W ++I AMHGD L ++ ++ ++ N +TF+ +L CCH
Sbjct: 282 NMFNAMPRK--NVITWTSMIAAFAMHGDGPSALTLFGQMKGEGVEPNGVTFLVLLYACCH 339
Query: 535 AGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWG 594
AGLV G F+ M Y +EP +HYGCMVDL+GRA +++A ++I SM ++ +V IWG
Sbjct: 340 AGLVYEGRSLFECMLQEYRIEPKHEHYGCMVDLMGRAKLMQEAVDLIESMHIRPNVAIWG 399
Query: 595 TLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCG 654
+LLAA +HG++E+GE AAK + L P+H + VLLSNI+A +G W +A +R M+ G
Sbjct: 400 SLLAACWMHGDIELGEFAAKKILELDPNHDGAYVLLSNIHAKSGNWNNAQKLRVMMKVHG 459
Query: 655 MKRLPGFS 662
+ + G+S
Sbjct: 460 VSKETGYS 467
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 112/416 (26%), Positives = 198/416 (47%), Gaps = 41/416 (9%)
Query: 95 MISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPN 154
++ Y R+ +AR VFD P + V++ M+ + +RE L + M+ V+P+
Sbjct: 34 LVGAYAACQRVAEARRVFDGMPERDLVAWGVMLDSYFNTQNYRETLLLLNKMKRSRVVPD 93
Query: 155 EVTLASVISSSVHLGGIWECRMLHGL--VIKLMIDGFVIISTNLLNMYCVCSSLVEARSL 212
+V LA+V+S+ H + + +H V + +D +S+ L+NMY C + A +
Sbjct: 94 QVILATVLSTCGHTRHLRSGKTIHSYIQVSDIFVDAR--LSSALINMYASCMDMEMADKI 151
Query: 213 FDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEAL 272
+ M+ +++VS M+ G+AK G +E+AR +F + KDVVSW MI Y + + SE L
Sbjct: 152 YSGMQRKDLVSSTAMVCGYAKNGKIEIARSIFNHMAEKDVVSWSAMISAYAENNQPSEVL 211
Query: 273 TMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFY 332
++ M G++P+++ ++ +ISAC + + IHSI+ GF I +I +
Sbjct: 212 NLFNKMQGCGVSPDEITMLSVISACANIGSLDKARWIHSIVGNHGFYKILSICNALIDMF 271
Query: 333 AACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMIS 392
+ CG + LA F + ++ +W ++IA F +G
Sbjct: 272 SKCGSLTLALNMFNAMPRKNVITWTSMIAAFAMHG------------------------- 306
Query: 393 GYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNN-SIT 451
+ P+ AL LF M GV+PN +T + + A +G + EGR E +L I
Sbjct: 307 -----DGPS-ALTLFGQMKGEGVEPNGVTFLVLLYACCHAGLVYEGRSLFECMLQEYRIE 360
Query: 452 LNDNLSAAIIDMYAKCGSINTAFEVF--YHIRDRTTSVSPWNAIICGLAMHGDANL 505
++D+ + + A ++ HIR +V+ W +++ MHGD L
Sbjct: 361 PKHEHYGCMVDLMGRAKLMQEAVDLIESMHIR---PNVAIWGSLLAACWMHGDIEL 413
Score = 129 bits (323), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 98/360 (27%), Positives = 167/360 (46%), Gaps = 53/360 (14%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
++ L + L C + G+ IHS I S + + + ++LIN+YA C + A ++
Sbjct: 94 QVILATVLSTCGHTRHLRSGKTIHSYIQVSDIFVDARLSSALINMYASCMDMEMADKIYS 153
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
D V+ M+ GY +N ++ AR +F+ K VS+++MI +A+N+ E L +
Sbjct: 154 GMQRKDLVSSTAMVCGYAKNGKIEIARSIFNHMAEKDVVSWSAMISAYAENNQPSEVLNL 213
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
F M+ GV P+E+T+ SVIS+ ++G + + R +H +V + I L++M+
Sbjct: 214 FNKMQGCGVSPDEITMLSVISACANIGSLDKARWIHSIVGNHGFYKILSICNALIDMFSK 273
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
C SL A ++F+ M +N+++W M+ FA G DG
Sbjct: 274 CGSLTLALNMFNAMPRKNVITWTSMIAAFAMHG------------------------DG- 308
Query: 263 LQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD 322
ALT++ M +G+ PN V + L+ AC A EG + F+C
Sbjct: 309 ------PSALTLFGQMKGEGVEPNGVTFLVLLYACCHAGLVYEGRSL--------FEC-- 352
Query: 323 FIQATII---HFYAAC-----GRINLARLQFEL----GIKDHIASWNALIAGFIRNGMIE 370
+Q I H + C GR L + +L I+ ++A W +L+A +G IE
Sbjct: 353 MLQEYRIEPKHEHYGCMVDLMGRAKLMQEAVDLIESMHIRPNVAIWGSLLAACWMHGDIE 412
>gi|115443695|ref|NP_001045627.1| Os02g0106300 [Oryza sativa Japonica Group]
gi|50252103|dbj|BAD28089.1| putative pentatricopeptide (PPR) repeat-containing protein-like
protein [Oryza sativa Japonica Group]
gi|113535158|dbj|BAF07541.1| Os02g0106300 [Oryza sativa Japonica Group]
gi|215766741|dbj|BAG98969.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 751
Score = 328 bits (842), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 188/622 (30%), Positives = 324/622 (52%), Gaps = 39/622 (6%)
Query: 45 IHSLIFKSGLESN-TFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRND 103
+H LI K+ L++ TF+ N L+ YAK G +++A+ +FD + N ++S +
Sbjct: 34 VHCLILKTFLQAPPTFLLNHLLTAYAKSGRLARARRVFDEMPDPNLFTRNALLSALAHSR 93
Query: 104 RLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDM-RILGVIPNEVTLASVI 162
+ D +F P + VSY ++I GF+ +++++R + R V P +TL+++I
Sbjct: 94 LVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMI 153
Query: 163 SSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIV 222
+ L +H V++L + + + L++MY + +AR +F EM+ + +V
Sbjct: 154 MVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVV 213
Query: 223 SWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDG 282
+N ++ G + ++E A+ LF+ + +D ++W TM+ G Q EAL ++R M +G
Sbjct: 214 MYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEG 273
Query: 283 IAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLAR 342
+ + +++ACG A EG QIH+ I + ++ F+ + ++ Y+ C I LA
Sbjct: 274 VGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAE 333
Query: 343 LQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNM 402
+F M R++ SW+AMI GY QN
Sbjct: 334 -------------------------------AVFRRMTCRNIISWTAMIVGYGQNACSEE 362
Query: 403 ALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIID 462
A+ F M G+KP++ T+ SV + A+ +L+EG H L + + +S A++
Sbjct: 363 AVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVT 422
Query: 463 MYAKCGSINTAFEVFYHI--RDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKL 520
+Y KCGSI A +F + D+ + W A++ G A G A T+ ++ + +K
Sbjct: 423 LYGKCGSIEDAHRLFDEMSFHDQVS----WTALVTGYAQFGKAKETIDLFEKMLANGLKP 478
Query: 521 NSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEV 580
+ +TFIGVLS C AGLV+ G YF SM+ + + P HY CM+DL R+G+ ++AEE
Sbjct: 479 DGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHGIVPIDDHYTCMIDLYSRSGRFKEAEEF 538
Query: 581 IRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRW 640
I+ MP D W TLL++ R+ GN+E+G+ AA++L P + S VLL +++A G+W
Sbjct: 539 IKQMPHSPDAFGWATLLSSCRLRGNMEIGKWAAENLLETDPQNPASYVLLCSMHAAKGQW 598
Query: 641 EDAFSIRKEMRDCGMKRLPGFS 662
+ +R+ MRD +K+ PG S
Sbjct: 599 TEVAHLRRGMRDRQVKKEPGCS 620
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 114/466 (24%), Positives = 204/466 (43%), Gaps = 66/466 (14%)
Query: 42 GQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIR 101
G +H + + G + F+ + L+++YAK GLI A+ +F V N +I+G +R
Sbjct: 165 GHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITGLLR 224
Query: 102 NDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASV 161
+ DA+ +F + +++T+M+ G QN EAL+VFR MR GV ++ T S+
Sbjct: 225 CKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSI 284
Query: 162 ISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNI 221
+++ L + E + +H + + + V + + L++MY C S+ A ++F M RNI
Sbjct: 285 LTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNI 344
Query: 222 VSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCD 281
+SW M+ G+ + E EA+ + M D
Sbjct: 345 ISWTAMIVGYGQNACSE-------------------------------EAVRAFSEMQMD 373
Query: 282 GIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLA 341
GI P+D + +IS+C + EG Q H + + +G Y + ++ Y CG I A
Sbjct: 374 GIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDA 433
Query: 342 -RLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQP 400
RL E+ D + SW AL+ G YAQ +
Sbjct: 434 HRLFDEMSFHDQV-SWTALVTG-------------------------------YAQFGKA 461
Query: 401 NMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG-RWAHEYVLNNSITLNDNLSAA 459
++LF M+ G+KP+ +T + V A + +G +++G + ++ I D+
Sbjct: 462 KETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHGIVPIDDHYTC 521
Query: 460 IIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANL 505
+ID+Y++ G A E F + W ++ + G+ +
Sbjct: 522 MIDLYSRSGRFKEA-EEFIKQMPHSPDAFGWATLLSSCRLRGNMEI 566
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 97/254 (38%), Gaps = 76/254 (29%)
Query: 13 QKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCG 72
Q ++ D+ L S + C+ ++ +G Q H L SGL + N+L+ LY KCG
Sbjct: 371 QMDGIKPDDFTLG--SVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCG 428
Query: 73 LISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQ 132
I A +FD S D V+ +++GY AQ
Sbjct: 429 SIEDAHRLFDEMSFHDQVSWTALVTGY-------------------------------AQ 457
Query: 133 NDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVII 192
+E +++F M G+ P+ VT V+S+
Sbjct: 458 FGKAKETIDLFEKMLANGLKPDGVTFIGVLSA---------------------------- 489
Query: 193 STNLLNMYCVCSSLVEAR-SLFDEM-KERNIVS----WNVMLNGFAKAGLVELARELFER 246
C + LVE FD M K+ IV + M++ ++++G + A E ++
Sbjct: 490 --------CSRAGLVEKGCDYFDSMQKDHGIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQ 541
Query: 247 IP-SKDVVSWGTMI 259
+P S D W T++
Sbjct: 542 MPHSPDAFGWATLL 555
>gi|225444744|ref|XP_002278128.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290
[Vitis vinifera]
Length = 597
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 205/615 (33%), Positives = 316/615 (51%), Gaps = 68/615 (11%)
Query: 50 FKSGLESNTFIQNSLINLYAKCGLISQAKSMF--DSCSTLDPVACNIMISGYIRNDRLND 107
F++ S +F N L+N + +S+ ++ + C ++ ++I+ ++
Sbjct: 23 FRTNYHSRSF--NYLLNCCSSLPDLSRIHALVVTNGCGQNLLLSTKLIITACCLAPTMDY 80
Query: 108 AREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVH 167
AR++FD+ P + + ++I G+A EAL ++ +M G+ P+ T V+ S
Sbjct: 81 ARKMFDQMPKRDVFLWNTLIRGYADAGPCEEALALYSNMHGAGLFPDNYTFPFVVRSCAV 140
Query: 168 LGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVM 227
L + E + +H ++K D V + ++L+ MY + +F EM RNIVS
Sbjct: 141 LSALREGKEVHCNIVKHGFDSDVFVQSSLVAMYSQSGETLGMELVFGEMVVRNIVS---- 196
Query: 228 LNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPND 287
W +I GY+Q E L ++R M+ G PN
Sbjct: 197 ---------------------------WTAVIAGYVQNRYFKEGLGVFREMVGSGTQPNA 229
Query: 288 VMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFEL 347
V +V ++ AC GL+ ++ +IH Y +L
Sbjct: 230 VTLVSVLPACA-------GLEFLNL-------------GKLIHGYG-----------IKL 258
Query: 348 GIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELF 407
G+ ++ NALIA + + G +E AR LF+ M +++ SW+AMI+ Y QN A++LF
Sbjct: 259 GVDPDVSLTNALIALYGKCGNVETARSLFDGMVVQNLVSWNAMIAAYEQNNAGANAVKLF 318
Query: 408 HGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKC 467
M V + ITMVSV A AS G L GRW HE V + +N +++ A+IDMYAKC
Sbjct: 319 RRMQAEKVDFDYITMVSVISACASLGALNTGRWMHELVKRKGLEINVSITNALIDMYAKC 378
Query: 468 GSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIG 527
G+I+ A EVF + R SV W ++I A HG LK++S ++ +K NS TF
Sbjct: 379 GNIDLAREVFERLPCR--SVVSWTSMIGACASHGHGEDALKLFSRMKDEGVKPNSFTFAA 436
Query: 528 VLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMK 587
V + C H+GLV+ G ++F+SM Y++ P ++H CMVDLLGRAG L +A E I MP++
Sbjct: 437 VFTACRHSGLVEEGRKHFESMMRDYSIMPGVEHCACMVDLLGRAGSLMEAYEFIDKMPVE 496
Query: 588 ADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIR 647
DV +WG LL + RIH N+E+ E A+ L L P VL+SNIYA+AGRWEDA +R
Sbjct: 497 PDVSVWGALLGSCRIHSNLELAELVAEKLFLLDPQTVTFYVLMSNIYAEAGRWEDAARLR 556
Query: 648 KEMRDCGMKRLPGFS 662
K M + +K++PG S
Sbjct: 557 KLMEERELKKIPGHS 571
Score = 168 bits (426), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 133/496 (26%), Positives = 214/496 (43%), Gaps = 97/496 (19%)
Query: 11 NSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAK 70
N A L +Y V +R C+ A+ +G+++H I K G +S+ F+Q+SL+ +Y++
Sbjct: 118 NMHGAGLFPDNYTFPFV--VRSCAVLSALREGKEVHCNIVKHGFDSDVFVQSSLVAMYSQ 175
Query: 71 CGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGF 130
G + +F + V+ +I+GY+
Sbjct: 176 SGETLGMELVFGEMVVRNIVSWTAVIAGYV------------------------------ 205
Query: 131 AQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFV 190
QN ++E L VFR+M G PN VTL SV+ + L + +++HG IKL +D V
Sbjct: 206 -QNRYFKEGLGVFREMVGSGTQPNAVTLVSVLPACAGLEFLNLGKLIHGYGIKLGVDPDV 264
Query: 191 IISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSK 250
++ L+ +Y C ++ ARSLFD M +N+VSWN
Sbjct: 265 SLTNALIALYGKCGNVETARSLFDGMVVQNLVSWN------------------------- 299
Query: 251 DVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIH 310
MI Y Q + A+ ++R M + + + + +V +ISAC A G +H
Sbjct: 300 ------AMIAAYEQNNAGANAVKLFRRMQAEKVDFDYITMVSVISACASLGALNTGRWMH 353
Query: 311 SIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIE 370
++ + G + I +I YA CG I+LAR FE + SW ++I +G E
Sbjct: 354 ELVKRKGLEINVSITNALIDMYAKCGNIDLAREVFERLPCRSVVSWTSMIGACASHGHGE 413
Query: 371 DARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIA 430
DA +LF+ M+ D GVKPN T +VF A
Sbjct: 414 DALKLFSRMK-------------------------------DEGVKPNSFTFAAVFTACR 442
Query: 431 SSGTLKEGRWAHEYVLNN-SITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSP 489
SG ++EGR E ++ + SI A ++D+ + GS+ A+E F VS
Sbjct: 443 HSGLVEEGRKHFESMMRDYSIMPGVEHCACMVDLLGRAGSLMEAYE-FIDKMPVEPDVSV 501
Query: 490 WNAIICGLAMHGDANL 505
W A++ +H + L
Sbjct: 502 WGALLGSCRIHSNLEL 517
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 125/275 (45%), Gaps = 37/275 (13%)
Query: 9 VFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLY 68
+F +A + DY + +VS + C++ A++ G+ +H L+ + GLE N I N+LI++Y
Sbjct: 317 LFRRMQAEKVDFDY-ITMVSVISACASLGALNTGRWMHELVKRKGLEINVSITNALIDMY 375
Query: 69 AKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIM 128
AKCG ++ AREVF++ P + VS+TSMI
Sbjct: 376 AKCG-------------------------------NIDLAREVFERLPCRSVVSWTSMIG 404
Query: 129 GFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRM-LHGLVIKLMID 187
A + +AL++F M+ GV PN T A+V ++ H G + E R ++ I
Sbjct: 405 ACASHGHGEDALKLFSRMKDEGVKPNSFTFAAVFTACRHSGLVEEGRKHFESMMRDYSIM 464
Query: 188 GFVIISTNLLNMYCVCSSLVEARSLFDEMK-ERNIVSWNVMLNG---FAKAGLVELAREL 243
V ++++ SL+EA D+M E ++ W +L + L EL E
Sbjct: 465 PGVEHCACMVDLLGRAGSLMEAYEFIDKMPVEPDVSVWGALLGSCRIHSNLELAELVAEK 524
Query: 244 FERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAM 278
+ + V + M + Y + R +A + + M
Sbjct: 525 LFLLDPQTVTFYVLMSNIYAEAGRWEDAARLRKLM 559
>gi|225461979|ref|XP_002267354.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 632
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 169/428 (39%), Positives = 252/428 (58%), Gaps = 4/428 (0%)
Query: 240 ARELFERIPSK--DVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISAC 297
A+++F+ + + + W + + + + +A+ ++ + + P+ ++ AC
Sbjct: 79 AQQIFKCVEKQKPETFVWNSCLKALAEGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLRAC 138
Query: 298 GRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWN 357
+ G +H ++ K GF ++Q I+H YA+CG + ARL FE + + +WN
Sbjct: 139 LNLLDLSNGRILHGVVEKVGFRSNLYLQNMIVHLYASCGEMGEARLLFEKMPQRDVVTWN 198
Query: 358 ALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKP 417
+IA I+ G E A LF+ M +R+V SW++MI+GY Q + A+ LF M +AGVK
Sbjct: 199 IMIAQLIKQGDHEGAYDLFSRMPERNVRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKC 258
Query: 418 NEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVF 477
NE+T+V+V A A G L G HEY + N +S +IDMY KCG + A +VF
Sbjct: 259 NEVTVVAVLAACADLGALDLGMRIHEYSNRHGFKRNVRISNTLIDMYVKCGCLEEACKVF 318
Query: 478 YHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGL 537
+ +RT V W+A+I GLAMHG A L+++SD+ + I+ N +TFIG+L C H GL
Sbjct: 319 EEMEERT--VVSWSAMIGGLAMHGRAEEALRLFSDMSQVGIEPNGVTFIGLLHACSHMGL 376
Query: 538 VDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLL 597
+ G R+F SM Y + P ++HYGCMVDLL RAG L +A E I +MPMK + V+WG LL
Sbjct: 377 ISEGRRFFASMTRDYGIIPQIEHYGCMVDLLSRAGLLHEAHEFILNMPMKPNGVVWGALL 436
Query: 598 AASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKR 657
A R+H NVE+ E A K L L P + V+LSNIYA+AGRWED +RK M+D +K+
Sbjct: 437 GACRVHKNVEMAEEAIKHLLELDPLNDGYYVVLSNIYAEAGRWEDTARVRKFMKDRQVKK 496
Query: 658 LPGFSGVV 665
PG+S +
Sbjct: 497 TPGWSSIT 504
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 109/428 (25%), Positives = 204/428 (47%), Gaps = 34/428 (7%)
Query: 123 YTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVI 182
+ S + A+ D +A+ +F +R V P+ T +SV+ + ++L + R+LHG+V
Sbjct: 96 WNSCLKALAEGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLRACLNLLDLSNGRILHGVVE 155
Query: 183 KLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARE 242
K+ + + ++++Y C + EAR LF++M +R++V+WN+M+ K G E A +
Sbjct: 156 KVGFRSNLYLQNMIVHLYASCGEMGEARLLFEKMPQRDVVTWNIMIAQLIKQGDHEGAYD 215
Query: 243 LFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMA 302
LF R+P ++V SW +MI GY+Q + EA+ ++ M G+ N+V +V +++AC A
Sbjct: 216 LFSRMPERNVRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGA 275
Query: 303 FGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAG 362
G++IH + GF I T+I Y CG + A FE + + SW+A+I G
Sbjct: 276 LDLGMRIHEYSNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMIGG 335
Query: 363 FIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITM 422
+G E+A +LF++M + G++PN +T
Sbjct: 336 LAMHGRAEEALRLFSDMSQ-------------------------------VGIEPNGVTF 364
Query: 423 VSVFCAIASSGTLKEG-RWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIR 481
+ + A + G + EG R+ + I ++D+ ++ G ++ A E ++
Sbjct: 365 IGLLHACSHMGLISEGRRFFASMTRDYGIIPQIEHYGCMVDLLSRAGLLHEAHEFILNMP 424
Query: 482 DRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLG 541
+ V W A++ +H + + + L + + LN ++ + + AG +
Sbjct: 425 MKPNGVV-WGALLGACRVHKNVEMAEEAIKHLLELD-PLNDGYYVVLSNIYAEAGRWEDT 482
Query: 542 ERYFKSMK 549
R K MK
Sbjct: 483 ARVRKFMK 490
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 119/475 (25%), Positives = 196/475 (41%), Gaps = 99/475 (20%)
Query: 28 SALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTL 87
S LR C + +S G+ +H ++ K G SN ++QN +++LYA CG + +A+ +F+
Sbjct: 133 SVLRACLNLLDLSNGRILHGVVEKVGFRSNLYLQNMIVHLYASCGEMGEARLLFEKMPQR 192
Query: 88 DPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMR 147
D V NIMI+ I+ A ++F + P + S+TSMI G+ Q +EA+ +F M
Sbjct: 193 DVVTWNIMIAQLIKQGDHEGAYDLFSRMPERNVRSWTSMIAGYVQCGKAKEAIHLFAKME 252
Query: 148 ILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLV 207
GV NEVT+ +V+++ LG + +H + V IS L++MY C L
Sbjct: 253 EAGVKCNEVTVVAVLAACADLGALDLGMRIHEYSNRHGFKRNVRISNTLIDMYVKCGCLE 312
Query: 208 EARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVER 267
EA +F+EM+ER +VSW+ M+ G A G R
Sbjct: 313 EACKVFEEMEERTVVSWSAMIGGLAMHG-------------------------------R 341
Query: 268 LSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQAT 327
EAL ++ M GI PN V + L+ AC EG +
Sbjct: 342 AEEALRLFSDMSQVGIEPNGVTFIGLLHACSHMGLISEGRR------------------- 382
Query: 328 IIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ-KRDVYS 386
F+A+ R + GI I + ++ R G++ +A + NM K +
Sbjct: 383 ---FFASMTR--------DYGIIPQIEHYGCMVDLLSRAGLLHEAHEFILNMPMKPNGVV 431
Query: 387 WSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVL 446
W A++ ++ MA E +++ + P
Sbjct: 432 WGALLGACRVHKNVEMAEEAIKHLLE--LDP----------------------------- 460
Query: 447 NNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSP-WNAIICGLAMH 500
LND + ++YA+ G V ++DR +P W++I +H
Sbjct: 461 -----LNDGYYVVLSNIYAEAGRWEDTARVRKFMKDRQVKKTPGWSSITVDGVVH 510
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 103/254 (40%), Gaps = 65/254 (25%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E+ +V+ L C+ A+ G +IH + G + N I N+LI++Y KCG
Sbjct: 260 EVTVVAVLAACADLGALDLGMRIHEYSNRHGFKRNVRISNTLIDMYVKCGC--------- 310
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
L +A +VF++ + VS+++MI G A + EAL +
Sbjct: 311 ----------------------LEEACKVFEEMEERTVVSWSAMIGGLAMHGRAEEALRL 348
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
F DM +G+ PN VT ++ + H+G I E R M + II
Sbjct: 349 FSDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRF----FASMTRDYGIIP--------- 395
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSK-DVVSWGTMIDG 261
I + M++ ++AGL+ A E +P K + V WG ++
Sbjct: 396 -----------------QIEHYGCMVDLLSRAGLLHEAHEFILNMPMKPNGVVWGALLGA 438
Query: 262 ---YLQVERLSEAL 272
+ VE EA+
Sbjct: 439 CRVHKNVEMAEEAI 452
>gi|356528513|ref|XP_003532847.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
mitochondrial-like [Glycine max]
Length = 651
Score = 328 bits (841), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 197/633 (31%), Positives = 312/633 (49%), Gaps = 93/633 (14%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
L+ C+ + Q IH+ + KS +SN F+Q + +++Y KCG
Sbjct: 60 LKACAKLSHLRNSQIIHAHVLKSCFQSNIFVQTATVDMYVKCG----------------- 102
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
RL DA VF + P++ S+ +M++GFAQ+ + R MR+
Sbjct: 103 --------------RLEDAHNVFVEMPVRDIASWNAMLLGFAQSGFLDRLSCLLRHMRLS 148
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
G+ P+ VT+ +I S + + + ++ I++ + V ++ L+ Y C +L A
Sbjct: 149 GIRPDAVTVLLLIDSILRVKSLTSLGAVYSFGIRIGVHMDVSVANTLIAAYSKCGNLCSA 208
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLS 269
+LFDE+ +GL + VVSW +MI Y E+
Sbjct: 209 ETLFDEIN----------------SGL-------------RSVVSWNSMIAAYANFEKHV 239
Query: 270 EALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATII 329
+A+ Y+ ML G +P+ I++L+S+C + A GL +HS VK G D + T+I
Sbjct: 240 KAVNCYKGMLDGGFSPDISTILNLLSSCMQPKALFHGLLVHSHGVKLGCDSDVCVVNTLI 299
Query: 330 HFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSA 389
Y+ CG ++ AR LFN M + SW+
Sbjct: 300 CMYSKCGDVH-------------------------------SARFLFNGMSDKTCVSWTV 328
Query: 390 MISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNS 449
MIS YA+ + A+ LF+ M AG KP+ +T++++ +G L+ G+W Y +NN
Sbjct: 329 MISAYAEKGYMSEAMTLFNAMEAAGEKPDLVTVLALISGCGQTGALELGKWIDNYSINNG 388
Query: 450 ITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKI 509
+ N + A+IDMYAKCG N A E+FY + +RT V W +I A++GD L++
Sbjct: 389 LKDNVVVCNALIDMYAKCGGFNDAKELFYTMANRT--VVSWTTMITACALNGDVKDALEL 446
Query: 510 YSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLG 569
+ + + +K N ITF+ VL C H GLV+ G F M Y + P + HY CMVDLLG
Sbjct: 447 FFMMLEMGMKPNHITFLAVLQACAHGGLVERGLECFNMMTQKYGINPGIDHYSCMVDLLG 506
Query: 570 RAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVL 629
R G L +A E+I+SMP + D IW LL+A ++HG +E+G+ ++ L L+P V
Sbjct: 507 RKGHLREALEIIKSMPFEPDSGIWSALLSACKLHGKMEMGKYVSEQLFELEPQVAVPYVE 566
Query: 630 LSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
++NIYA A WE +IR+ M+ +++ PG S
Sbjct: 567 MANIYASAEMWEGVAAIRRNMKYLQVRKSPGQS 599
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 83/408 (20%), Positives = 164/408 (40%), Gaps = 41/408 (10%)
Query: 252 VVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHS 311
+ +W + + AL ++R M GI PN+ ++ AC + IH+
Sbjct: 18 LFTWNSNFRHLVNQGHAQNALILFRQMKQSGITPNNSTFPFVLKACAKLSHLRNSQIIHA 77
Query: 312 IIVKAGFDCYDFIQATIIHFYAACGRINLARLQF-ELGIKDHIASWNALIAGFIRNGMIE 370
++K+ F F+Q + Y CGR+ A F E+ ++D IASWNA++ GF ++G ++
Sbjct: 78 HVLKSCFQSNIFVQTATVDMYVKCGRLEDAHNVFVEMPVRD-IASWNAMLLGFAQSGFLD 136
Query: 371 DARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIA 430
L +M+ +G++P+ +T++ + +I
Sbjct: 137 RLSCLLRHMRL-------------------------------SGIRPDAVTVLLLIDSIL 165
Query: 431 SSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPW 490
+L + + + + ++ +++ +I Y+KCG++ +A +F I SV W
Sbjct: 166 RVKSLTSLGAVYSFGIRIGVHMDVSVANTLIAAYSKCGNLCSAETLFDEINSGLRSVVSW 225
Query: 491 NAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKS 550
N++I A + Y + + T + +LS+C + G S
Sbjct: 226 NSMIAAYANFEKHVKAVNCYKGMLDGGFSPDISTILNLLSSCMQPKALFHG-LLVHSHGV 284
Query: 551 VYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGE 610
+ D+ ++ + + G + A + M K V W +++A G +
Sbjct: 285 KLGCDSDVCVVNTLICMYSKCGDVHSARFLFNGMSDKT-CVSWTVMISAYAEKGYMSEAM 343
Query: 611 RA--AKSLAGLQPSHGPSRVLLSNI----YADAGRWEDAFSIRKEMRD 652
A AG +P L+S + G+W D +SI ++D
Sbjct: 344 TLFNAMEAAGEKPDLVTVLALISGCGQTGALELGKWIDNYSINNGLKD 391
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 80/370 (21%), Positives = 144/370 (38%), Gaps = 93/370 (25%)
Query: 25 ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSC 84
+++ L C A+ G +HS K G +S+ + N+LI +Y+KCG + A+ +F+
Sbjct: 259 TILNLLSSCMQPKALFHGLLVHSHGVKLGCDSDVCVVNTLICMYSKCGDVHSARFLFNGM 318
Query: 85 STLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFR 144
S V+ +MIS Y A+ EA+ +F
Sbjct: 319 SDKTCVSWTVMISAY-------------------------------AEKGYMSEAMTLFN 347
Query: 145 DMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCS 204
M G P+ VT+ ++IS G + + + I + V++ L++MY C
Sbjct: 348 AMEAAGEKPDLVTVLALISGCGQTGALELGKWIDNYSINNGLKDNVVVCNALIDMYAKCG 407
Query: 205 SLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQ 264
+A+ LF M R +VSW M+ A G V+ A ELF ++
Sbjct: 408 GFNDAKELFYTMANRTVVSWTTMITACALNGDVKDALELF-----------------FMM 450
Query: 265 VERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFI 324
+E G+ PN + + ++ AC H +V+ G +C++ +
Sbjct: 451 LEM--------------GMKPNHITFLAVLQACA-----------HGGLVERGLECFNMM 485
Query: 325 QATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ-KRD 383
+ GI I ++ ++ R G + +A ++ +M + D
Sbjct: 486 TQ-------------------KYGINPGIDHYSCMVDLLGRKGHLREALEIIKSMPFEPD 526
Query: 384 VYSWSAMISG 393
WSA++S
Sbjct: 527 SGIWSALLSA 536
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 122/280 (43%), Gaps = 45/280 (16%)
Query: 8 SVFNSQKANLQNSDYE--LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLI 65
++FN+ +A + D LAL+S C A+ G+ I + +GL+ N + N+LI
Sbjct: 344 TLFNAMEAAGEKPDLVTVLALISG---CGQTGALELGKWIDNYSINNGLKDNVVVCNALI 400
Query: 66 NLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTS 125
++YAKCG NDA+E+F + VS+T+
Sbjct: 401 DMYAKCG-------------------------------GFNDAKELFYTMANRTVVSWTT 429
Query: 126 MIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWE--CRMLHGLVIK 183
MI A N ++ALE+F M +G+ PN +T +V+ + H GG+ E + + K
Sbjct: 430 MITACALNGDVKDALELFFMMLEMGMKPNHITFLAVLQACAH-GGLVERGLECFNMMTQK 488
Query: 184 LMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMK-ERNIVSWNVMLNGFAKAGLVELAR- 241
I+ + + ++++ L EA + M E + W+ +L+ G +E+ +
Sbjct: 489 YGINPGIDHYSCMVDLLGRKGHLREALEIIKSMPFEPDSGIWSALLSACKLHGKMEMGKY 548
Query: 242 ---ELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAM 278
+LFE P + V + M + Y E + R M
Sbjct: 549 VSEQLFELEP-QVAVPYVEMANIYASAEMWEGVAAIRRNM 587
>gi|125562063|gb|EAZ07511.1| hypothetical protein OsI_29767 [Oryza sativa Indica Group]
Length = 567
Score = 328 bits (841), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 193/539 (35%), Positives = 294/539 (54%), Gaps = 46/539 (8%)
Query: 126 MIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWEC-RMLHGLVIKL 184
+I A + R + F + G++P+ TL ++ S+ L +H ++
Sbjct: 65 LIRASASSASPRLSFAAFSSLLRCGLVPDRFTLPPLLGSAGKLPAFPRTGAQVHAQAVRR 124
Query: 185 MIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKE-RNIVSWNVMLNGFAKAGLVELAREL 243
V + LL MY R +F ++VSWN ++ G+ K G +E A+ +
Sbjct: 125 GFLADVFVVNALLAMYGALRDAASMREVFGSCAGVADVVSWNTVIGGYVKCGEMESAKRV 184
Query: 244 FERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAF 303
F+ +P ++ VSW TM+ GY L A M+ D + A GR +
Sbjct: 185 FDEMPRRNGVSWSTMVGGYAAAGELDVAREMF----------------DRMPAIGRNVV- 227
Query: 304 GEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGF 363
+++ +A G + LAR F+ ++ SWNA++ G+
Sbjct: 228 --------------------TWNSMVTGFARHGLLPLARKMFDEMPVRNLVSWNAMLRGY 267
Query: 364 IRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGM-VDAGVKPNEITM 422
N ++ AR+LF+ M ++DV SW+ MISGYAQ + LELF M ++ V+PNE+TM
Sbjct: 268 SVNSDMDGARELFDVMPEKDVVSWTCMISGYAQAGRYQDTLELFRAMQTESNVQPNEVTM 327
Query: 423 VSVFCAIASSGTLKEGRWAHEYVLNNSITLND--NLSAAIIDMYAKCGSINTAFEVFYHI 480
VSV A A+ L+EGRW H ++ + + LN+ NL AA+IDMYAKCG + A ++F +
Sbjct: 328 VSVLSACANLTALEEGRWVHAFIDKHKMVLNNEYNLGAALIDMYAKCGRTDIAVKIFNSL 387
Query: 481 RDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDL 540
DR +VS WNA+I LAM+G+A ++ + +++ K N ITF+GVL+ C H GLVD
Sbjct: 388 -DRK-NVSAWNALITRLAMNGNAQDSVDAFEQMKRTGEKPNDITFVGVLTACSHGGLVDE 445
Query: 541 GERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAAS 600
G R F+SM S V+P++KHYGCMVD+LGRAG LE+AEE+IRSMPM DV+++G LL A
Sbjct: 446 GRRCFQSMASTCGVQPEVKHYGCMVDMLGRAGLLEEAEELIRSMPMAPDVMVFGALLGAC 505
Query: 601 RIHGNVEVGERAAKSLAGLQPSHGPS--RVLLSNIYADAGRWEDAFSIRKEMRDCGMKR 657
R+H +V ER + L + S VL+S+IYA AG+W D R+ ++ G+++
Sbjct: 506 RMHKRFDVAERVQSEIHSLNLNAQQSGCHVLISDIYAAAGKWFDVLEARQVVQRSGIRK 564
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 135/487 (27%), Positives = 226/487 (46%), Gaps = 84/487 (17%)
Query: 42 GQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTL-DPVACNIMISGYI 100
G Q+H+ + G ++ F+ N+L+ +Y + + +F SC+ + D V+ N +I GY+
Sbjct: 114 GAQVHAQAVRRGFLADVFVVNALLAMYGALRDAASMREVFGSCAGVADVVSWNTVIGGYV 173
Query: 101 RNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLAS 160
+ + A+ VFD+ P + VS+++M+ G+A A E+F M +G N VT S
Sbjct: 174 KCGEMESAKRVFDEMPRRNGVSWSTMVGGYAAAGELDVAREMFDRMPAIGR--NVVTWNS 231
Query: 161 VISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERN 220
+++ HGL L AR +FDEM RN
Sbjct: 232 MVTGFAR----------HGL-------------------------LPLARKMFDEMPVRN 256
Query: 221 IVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLC 280
+VSWN ML G++ ++ ARELF+ +P KDVVSW MI GY Q R + L ++RAM
Sbjct: 257 LVSWNAMLRGYSVNSDMDGARELFDVMPEKDVVSWTCMISGYAQAGRYQDTLELFRAMQT 316
Query: 281 DG-IAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGF---DCYDFIQATIIHFYAACG 336
+ + PN+V +V ++SAC A EG +H+ I K + Y+ + A +I YA CG
Sbjct: 317 ESNVQPNEVTMVSVLSACANLTALEEGRWVHAFIDKHKMVLNNEYN-LGAALIDMYAKCG 375
Query: 337 RINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQ 396
R ++A F + ++++WNALI NG +D+ F M++
Sbjct: 376 RTDIAVKIFNSLDRKNVSAWNALITRLAMNGNAQDSVDAFEQMKR--------------- 420
Query: 397 NEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNN-SITLNDN 455
G KPN+IT V V A + G + EGR + + + +
Sbjct: 421 ----------------TGEKPNDITFVGVLTACSHGGLVDEGRRCFQSMASTCGVQPEVK 464
Query: 456 LSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSP----WNAIICGLAMHGDANLTLKIYS 511
++DM + G + A E+ R+ ++P + A++ MH ++ ++ S
Sbjct: 465 HYGCMVDMLGRAGLLEEAEELI-----RSMPMAPDVMVFGALLGACRMHKRFDVAERVQS 519
Query: 512 DLEKRNI 518
++ N+
Sbjct: 520 EIHSLNL 526
>gi|224141419|ref|XP_002324070.1| predicted protein [Populus trichocarpa]
gi|222867072|gb|EEF04203.1| predicted protein [Populus trichocarpa]
Length = 546
Score = 328 bits (840), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 176/464 (37%), Positives = 268/464 (57%), Gaps = 39/464 (8%)
Query: 234 AGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDL 293
+G + A ++F +I D+ W TM+ G Q + S+ + +Y M G+ P+ L
Sbjct: 60 SGAINYAHQVFAQITEPDIFMWNTMMRGSSQSKNPSKVVLLYTQMENRGVKPDKFTFSFL 119
Query: 294 ISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQF-------- 345
+ C R G +H ++K GF+ F++ T+I+F++ CG + +AR F
Sbjct: 120 LKGCTRLEWRKTGFCVHGKVLKYGFEVNSFVRNTLIYFHSNCGDLVIARSIFYDLPERSV 179
Query: 346 --------------ELGIKDHI---------ASWNALIAGFIRNGMIEDARQLFNNMQKR 382
ELG+ I SWN +I G+++NG +E+AR LF+ ++
Sbjct: 180 VSWSALTAGYARRGELGVARQIFDEMPVKDLVSWNVMITGYVKNGEMENARTLFDEAPEK 239
Query: 383 DVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAH 442
DV +W+ MI+GY + ALE+F M + G P+E+TM+S+ A A G L+ GR H
Sbjct: 240 DVVTWNTMIAGYVLRGEQRQALEMFEEMRNVGECPDEVTMLSLLSACADLGDLQVGRKLH 299
Query: 443 EYVLNNSITLNDN---LSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAM 499
+ + +T D L A++DMYAKCGSI A +VF +R++ V+ WN++I GLA
Sbjct: 300 CSI--SEMTRGDLSVLLGNALVDMYAKCGSIEIALQVFKKMREK--DVTTWNSVIGGLAF 355
Query: 500 HGDANLTLKIYSDLEK-RNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDL 558
HG A ++K++++++ +NIK N ITF+GV+ C HAG V+ G RYFK M+ Y++EP++
Sbjct: 356 HGHAEESIKLFAEMQALKNIKPNEITFVGVIVACSHAGNVEEGRRYFKLMRERYDIEPNM 415
Query: 559 KHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAG 618
H+GCMVDLLGRAG L +A E+I M ++ + +IW TLL A R+HGNVE+G A + L
Sbjct: 416 IHHGCMVDLLGRAGLLSEAFELIAKMEIEPNAIIWRTLLGACRVHGNVELGRLANERLLK 475
Query: 619 LQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
L+ VLLSNIYA AG W+ A +RK M D G+++ G S
Sbjct: 476 LRRDESGDYVLLSNIYASAGEWDGAEEVRKLMDDGGVRKEAGRS 519
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 104/435 (23%), Positives = 194/435 (44%), Gaps = 66/435 (15%)
Query: 105 LNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISS 164
+N A +VF + + +M+ G +Q+ + + ++ M GV P++ T + ++
Sbjct: 63 INYAHQVFAQITEPDIFMWNTMMRGSSQSKNPSKVVLLYTQMENRGVKPDKFTFSFLLKG 122
Query: 165 SVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSW 224
L +HG V+K + + L+ + C LV ARS+F ++ ER++VSW
Sbjct: 123 CTRLEWRKTGFCVHGKVLKYGFEVNSFVRNTLIYFHSNCGDLVIARSIFYDLPERSVVSW 182
Query: 225 NVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLS--------------- 269
+ + G+A+ G + +AR++F+ +P KD+VSW MI GY++ +
Sbjct: 183 SALTAGYARRGELGVARQIFDEMPVKDLVSWNVMITGYVKNGEMENARTLFDEAPEKDVV 242
Query: 270 ----------------EALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIH-SI 312
+AL M+ M G P++V ++ L+SAC G ++H SI
Sbjct: 243 TWNTMIAGYVLRGEQRQALEMFEEMRNVGECPDEVTMLSLLSACADLGDLQVGRKLHCSI 302
Query: 313 IVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDA 372
D + ++ YA CG I +A F+ + + +WN++I G +G E++
Sbjct: 303 SEMTRGDLSVLLGNALVDMYAKCGSIEIALQVFKKMREKDVTTWNSVIGGLAFHGHAEES 362
Query: 373 RQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASS 432
+LF MQ AL+ +KPNEIT V V A + +
Sbjct: 363 IKLFAEMQ----------------------ALK--------NIKPNEITFVGVIVACSHA 392
Query: 433 GTLKEGRWAHEYVLNNSITLNDNL--SAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPW 490
G ++EGR + ++ + N+ ++D+ + G ++ AFE+ + ++ W
Sbjct: 393 GNVEEGR-RYFKLMRERYDIEPNMIHHGCMVDLLGRAGLLSEAFELIAKMEIEPNAII-W 450
Query: 491 NAIICGLAMHGDANL 505
++ +HG+ L
Sbjct: 451 RTLLGACRVHGNVEL 465
Score = 135 bits (341), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 114/429 (26%), Positives = 190/429 (44%), Gaps = 77/429 (17%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMF-------- 81
L+ C+ G +H + K G E N+F++N+LI ++ CG + A+S+F
Sbjct: 120 LKGCTRLEWRKTGFCVHGKVLKYGFEVNSFVRNTLIYFHSNCGDLVIARSIFYDLPERSV 179
Query: 82 -----------------------DSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIK 118
D D V+ N+MI+GY++N + +AR +FD+ P K
Sbjct: 180 VSWSALTAGYARRGELGVARQIFDEMPVKDLVSWNVMITGYVKNGEMENARTLFDEAPEK 239
Query: 119 CCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLH 178
V++ +MI G+ R+ALE+F +MR +G P+EVT+ S++S+ LG + R LH
Sbjct: 240 DVVTWNTMIAGYVLRGEQRQALEMFEEMRNVGECPDEVTMLSLLSACADLGDLQVGRKLH 299
Query: 179 GLVIKLMI-DGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLV 237
+ ++ D V++ L++MY C S+ A +F +M+E+++ +WN ++ G A G
Sbjct: 300 CSISEMTRGDLSVLLGNALVDMYAKCGSIEIALQVFKKMREKDVTTWNSVIGGLAFHGHA 359
Query: 238 ELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISAC 297
E + +LF + + I PN++ V +I AC
Sbjct: 360 EESIKLFAEMQA------------------------------LKNIKPNEITFVGVIVAC 389
Query: 298 GRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIH---FYAACGRINLARLQFELGIKDHIA 354
A EG + ++ + YD I+ +IH GR L FEL K I
Sbjct: 390 SHAGNVEEGRRYFKLMRER----YD-IEPNMIHHGCMVDLLGRAGLLSEAFELIAKMEIE 444
Query: 355 S----WNALIAGFIRNGMIEDARQLFNNMQK--RDVYSWSAMISG-YAQNEQPNMALELF 407
W L+ +G +E R + K RD ++S YA + + A E+
Sbjct: 445 PNAIIWRTLLGACRVHGNVELGRLANERLLKLRRDESGDYVLLSNIYASAGEWDGAEEVR 504
Query: 408 HGMVDAGVK 416
M D GV+
Sbjct: 505 KLMDDGGVR 513
>gi|356537880|ref|XP_003537434.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Glycine max]
Length = 638
Score = 327 bits (839), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 174/442 (39%), Positives = 260/442 (58%), Gaps = 21/442 (4%)
Query: 240 ARELFERIPSKDVVSWGTMIDGYLQVE-RLSEALTMYRAMLCDG-IAPNDVMIVDLISAC 297
A +F+++P ++ +W T+I + + R +AL ++ ML + + PN ++ AC
Sbjct: 68 ALSVFDQLPERNCFAWNTVIRALAETQDRHLDALLVFCQMLSEATVEPNQFTFPSVLKAC 127
Query: 298 GRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQF------------ 345
EG Q+H +++K G +F+ ++ Y CG + A + F
Sbjct: 128 AVMARLAEGKQVHGLLLKFGLVDDEFVVTNLLRMYVMCGSMEDANVLFYRNVEGVDDVRN 187
Query: 346 ----ELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPN 401
E G + ++ N ++ G+ R G ++ AR+LF+ M +R V SW+ MISGYAQN
Sbjct: 188 LVRDERGREFNVVLCNVMVDGYARVGNLKAARELFDRMAQRSVVSWNVMISGYAQNGFYK 247
Query: 402 MALELFHGMVDAG-VKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAI 460
A+E+FH M+ G V PN +T+VSV AI+ G L+ G+W H Y N I ++D L +A+
Sbjct: 248 EAIEIFHRMMQMGDVLPNRVTLVSVLPAISRLGVLELGKWVHLYAEKNKIRIDDVLGSAL 307
Query: 461 IDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKL 520
+DMYAKCGSI A +VF R +V WNA+I GLAMHG AN S +EK I
Sbjct: 308 VDMYAKCGSIEKAIQVFE--RLPQNNVITWNAVIGGLAMHGKANDIFNYLSRMEKCGISP 365
Query: 521 NSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEV 580
+ +T+I +LS C HAGLVD G +F M + ++P ++HYGCMVDLLGRAG LE+AEE+
Sbjct: 366 SDVTYIAILSACSHAGLVDEGRSFFNDMVNSVGLKPKIEHYGCMVDLLGRAGYLEEAEEL 425
Query: 581 IRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRW 640
I +MPMK D VIW LL AS++H N+++G RAA+ L + P + V LSN+YA +G W
Sbjct: 426 ILNMPMKPDDVIWKALLGASKMHKNIKIGMRAAEVLMQMAPHDSGAYVALSNMYASSGNW 485
Query: 641 EDAFSIRKEMRDCGMKRLPGFS 662
+ ++R M+D +++ PG S
Sbjct: 486 DGVAAVRLMMKDMDIRKDPGCS 507
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 116/424 (27%), Positives = 201/424 (47%), Gaps = 58/424 (13%)
Query: 108 AREVFDKTPIKCCVSYTSMIMGFAQ-NDCWREALEVFRDMRILGVI-PNEVTLASVISSS 165
A VFD+ P + C ++ ++I A+ D +AL VF M + PN+ T SV+ +
Sbjct: 68 ALSVFDQLPERNCFAWNTVIRALAETQDRHLDALLVFCQMLSEATVEPNQFTFPSVLKAC 127
Query: 166 VHLGGIWECRMLHGLVIK--LMIDGFVIISTNLLNMYCVCSSLVEARSLF---------- 213
+ + E + +HGL++K L+ D FV+ TNLL MY +C S+ +A LF
Sbjct: 128 AVMARLAEGKQVHGLLLKFGLVDDEFVV--TNLLRMYVMCGSMEDANVLFYRNVEGVDDV 185
Query: 214 -----DEM-KERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVER 267
DE +E N+V NVM++G+A+ G ++ ARELF+R+ + VVSW MI GY Q
Sbjct: 186 RNLVRDERGREFNVVLCNVMVDGYARVGNLKAARELFDRMAQRSVVSWNVMISGYAQNGF 245
Query: 268 LSEALTMYRAMLCDG-IAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQA 326
EA+ ++ M+ G + PN V +V ++ A R G +H K D + +
Sbjct: 246 YKEAIEIFHRMMQMGDVLPNRVTLVSVLPAISRLGVLELGKWVHLYAEKNKIRIDDVLGS 305
Query: 327 TIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYS 386
++ YA CG I A FE ++++ +WNA+I G +G D + M+K
Sbjct: 306 ALVDMYAKCGSIEKAIQVFERLPQNNVITWNAVIGGLAMHGKANDIFNYLSRMEK----- 360
Query: 387 WSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVL 446
G+ P+++T +++ A + +G + EGR ++
Sbjct: 361 --------------------------CGISPSDVTYIAILSACSHAGLVDEGRSFFNDMV 394
Query: 447 NNSITLNDNLS--AAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDAN 504
NS+ L + ++D+ + G + A E+ ++ + V W A++ MH +
Sbjct: 395 -NSVGLKPKIEHYGCMVDLLGRAGYLEEAEELILNMPMKPDDVI-WKALLGASKMHKNIK 452
Query: 505 LTLK 508
+ ++
Sbjct: 453 IGMR 456
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 99/389 (25%), Positives = 174/389 (44%), Gaps = 79/389 (20%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMF- 81
+ S L+ C+ +++G+Q+H L+ K GL + F+ +L+ +Y CG + A +F
Sbjct: 117 QFTFPSVLKACAVMARLAEGKQVHGLLLKFGLVDDEFVVTNLLRMYVMCGSMEDANVLFY 176
Query: 82 ---------------DSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSM 126
+ + V CN+M+ GY R L ARE+FD+ + VS+ M
Sbjct: 177 RNVEGVDDVRNLVRDERGREFNVVLCNVMVDGYARVGNLKAARELFDRMAQRSVVSWNVM 236
Query: 127 IMGFAQNDCWREALEVFRDMRILG-VIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLM 185
I G+AQN ++EA+E+F M +G V+PN VTL SV+ + LG + + +H K
Sbjct: 237 ISGYAQNGFYKEAIEIFHRMMQMGDVLPNRVTLVSVLPAISRLGVLELGKWVHLYAEKNK 296
Query: 186 IDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFE 245
I ++ + L++MY C S+ +A +F+ + + N+++WN ++ G A G
Sbjct: 297 IRIDDVLGSALVDMYAKCGSIEKAIQVFERLPQNNVITWNAVIGGLAMHG---------- 346
Query: 246 RIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGE 305
+ D+ ++ + R C GI+P+DV + ++SAC A E
Sbjct: 347 --KANDIFNY------------------LSRMEKC-GISPSDVTYIAILSACSHAGLVDE 385
Query: 306 GLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIR 365
G + +V + +G+K I + ++ R
Sbjct: 386 GRSFFNDMVNS------------------------------VGLKPKIEHYGCMVDLLGR 415
Query: 366 NGMIEDARQLFNNMQ-KRDVYSWSAMISG 393
G +E+A +L NM K D W A++
Sbjct: 416 AGYLEEAEELILNMPMKPDDVIWKALLGA 444
>gi|125537719|gb|EAY84114.1| hypothetical protein OsI_05496 [Oryza sativa Indica Group]
Length = 751
Score = 327 bits (839), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 188/622 (30%), Positives = 325/622 (52%), Gaps = 39/622 (6%)
Query: 45 IHSLIFKSGLESN-TFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRND 103
+H LI K+ L++ TF+ N L+ YAK G +++A+ +FD + N ++S +
Sbjct: 34 VHCLILKTFLQAPPTFLLNHLLTAYAKSGRLARARRVFDEMPDPNLFTRNALLSALAHSR 93
Query: 104 RLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDM-RILGVIPNEVTLASVI 162
+ D +F P + VSY ++I GF+ +++++R + R V P +TL+++I
Sbjct: 94 LVPDMERLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMI 153
Query: 163 SSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIV 222
+ L +H V++L + + + L++MY + +AR +F EM+ + +V
Sbjct: 154 MVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVV 213
Query: 223 SWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDG 282
+N ++ G + ++E A+ LF+ + +D ++W TM+ G Q EAL ++R M +G
Sbjct: 214 MYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEG 273
Query: 283 IAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLAR 342
+ + +++ACG A EG QIH+ I + ++ F+ + ++ Y+ C I LA
Sbjct: 274 VGIDQYTFGSILTACGALAASEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAE 333
Query: 343 LQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNM 402
+F M R++ SW+AMI GY QN
Sbjct: 334 -------------------------------AVFRRMTCRNIISWTAMIVGYGQNACSEE 362
Query: 403 ALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIID 462
A+ F M G+KP++ T+ SV + A+ +L+EG H L + + +S A++
Sbjct: 363 AVRAFSEMQMDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVT 422
Query: 463 MYAKCGSINTAFEVFYHI--RDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKL 520
+Y KCGSI A +F + D+ + W A++ G A G A T+ ++ + +K
Sbjct: 423 LYGKCGSIEDAHRLFDEMSFHDQVS----WTALVTGYAQFGKAKETIDLFEKMLVNGLKP 478
Query: 521 NSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEV 580
+ +TFIGVLS C AGLV+ G YF SM+ +++ P HY CM+DL R+G+ ++AEE
Sbjct: 479 DGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHDIVPIDDHYTCMIDLYSRSGRFKEAEEF 538
Query: 581 IRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRW 640
I+ MP D W TLL++ R+ GN+E+G+ AA++L P + S VLL +++A G+W
Sbjct: 539 IKQMPHSPDAFGWATLLSSCRLRGNMEIGKWAAENLLETDPQNPASYVLLCSMHAAKGQW 598
Query: 641 EDAFSIRKEMRDCGMKRLPGFS 662
+ +R+ MRD +K+ PG S
Sbjct: 599 TEVAHLRRGMRDRQVKKEPGCS 620
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 114/466 (24%), Positives = 203/466 (43%), Gaps = 66/466 (14%)
Query: 42 GQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIR 101
G +H + + G + F+ + L+++YAK GLI A+ +F V N +I+G +R
Sbjct: 165 GHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITGLLR 224
Query: 102 NDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASV 161
+ DA+ +F + +++T+M+ G QN EAL+VFR MR GV ++ T S+
Sbjct: 225 CKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSI 284
Query: 162 ISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNI 221
+++ L E + +H + + + V + + L++MY C S+ A ++F M RNI
Sbjct: 285 LTACGALAASEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAVFRRMTCRNI 344
Query: 222 VSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCD 281
+SW M+ G+ + E EA+ + M D
Sbjct: 345 ISWTAMIVGYGQNACSE-------------------------------EAVRAFSEMQMD 373
Query: 282 GIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLA 341
GI P+D + +IS+C + EG Q H + + +G Y + ++ Y CG I A
Sbjct: 374 GIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDA 433
Query: 342 -RLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQP 400
RL E+ D + SW AL+ G YAQ +
Sbjct: 434 HRLFDEMSFHDQV-SWTALVTG-------------------------------YAQFGKA 461
Query: 401 NMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG-RWAHEYVLNNSITLNDNLSAA 459
++LF M+ G+KP+ +T + V A + +G +++G + ++ I D+
Sbjct: 462 KETIDLFEKMLVNGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHDIVPIDDHYTC 521
Query: 460 IIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANL 505
+ID+Y++ G A E F + W ++ + G+ +
Sbjct: 522 MIDLYSRSGRFKEA-EEFIKQMPHSPDAFGWATLLSSCRLRGNMEI 566
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 99/254 (38%), Gaps = 76/254 (29%)
Query: 13 QKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCG 72
Q ++ D+ L S + C+ ++ +G Q H L SGL + N+L+ LY KCG
Sbjct: 371 QMDGIKPDDFTLG--SVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKCG 428
Query: 73 LISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQ 132
I A +FD S D V+ +++GY AQ
Sbjct: 429 SIEDAHRLFDEMSFHDQVSWTALVTGY-------------------------------AQ 457
Query: 133 NDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVII 192
+E +++F M + G+ P+ VT V+S+
Sbjct: 458 FGKAKETIDLFEKMLVNGLKPDGVTFIGVLSA---------------------------- 489
Query: 193 STNLLNMYCVCSSLVEAR-SLFDEM-KERNIVS----WNVMLNGFAKAGLVELARELFER 246
C + LVE FD M K+ +IV + M++ ++++G + A E ++
Sbjct: 490 --------CSRAGLVEKGCDYFDSMQKDHDIVPIDDHYTCMIDLYSRSGRFKEAEEFIKQ 541
Query: 247 IP-SKDVVSWGTMI 259
+P S D W T++
Sbjct: 542 MPHSPDAFGWATLL 555
>gi|297821463|ref|XP_002878614.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324453|gb|EFH54873.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 588
Score = 327 bits (839), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 167/440 (37%), Positives = 259/440 (58%), Gaps = 20/440 (4%)
Query: 225 NVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIA 284
N ++ FA G +E AR++F+ P +D+VSW +I+GY ++ +A+ +Y+ M +G+
Sbjct: 120 NASIHMFASCGEMENARKVFDESPVRDLVSWNCLINGYKKIGEGEKAIEVYKVMESEGVK 179
Query: 285 PNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQ 344
P+DV ++ L+S+C G + + + G + ++ ++ CG I+ AR
Sbjct: 180 PDDVTMIGLVSSCAMLGDLNRGKEFYEYVKANGLRMTIPLANALMDMFSKCGDIHEARRI 239
Query: 345 FELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMAL 404
F+ K I S +LF++M+++DV W+AMI G Q ++ AL
Sbjct: 240 FDNLEKRTIVS------------------KLFDDMEEKDVVMWNAMIGGSVQAKRSQDAL 281
Query: 405 ELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMY 464
LF M + P+EITM+ A + G L G W H Y+ +S++LN L +++DMY
Sbjct: 282 ALFQEMQTSNTDPDEITMIHCLSACSQLGALDVGIWIHRYIEKHSLSLNVALGTSLVDMY 341
Query: 465 AKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSIT 524
AKCG+I+ A VF+ I+ R + + AII GLA+HGDA+ + ++++ I + IT
Sbjct: 342 AKCGNISEALCVFHGIQTRNSLT--YTAIIGGLALHGDASTAISYFNEMIDAGIAPDEIT 399
Query: 525 FIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSM 584
FIG+LS CCH G++ G YF MKS +N+ P LKHY MVDLLGRAG LE+A++++ SM
Sbjct: 400 FIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADKLMESM 459
Query: 585 PMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAF 644
PM+AD +WG LL R+HGNV++GE+AAK L L PS VLL +Y +A WEDA
Sbjct: 460 PMEADAAVWGALLFGCRMHGNVKLGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAK 519
Query: 645 SIRKEMRDCGMKRLPGFSGV 664
R+ M + G++++PG S +
Sbjct: 520 RARRMMNERGVEKIPGCSSI 539
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 116/478 (24%), Positives = 216/478 (45%), Gaps = 88/478 (18%)
Query: 40 SQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGY 99
S G I +FK LE + + N+ I+++A CG
Sbjct: 98 SLGHMILGHVFKLRLELVSHVHNASIHMFASCG--------------------------- 130
Query: 100 IRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLA 159
+ +AR+VFD++P++ VS+ +I G+ + +A+EV++ M GV P++VT+
Sbjct: 131 ----EMENARKVFDESPVRDLVSWNCLINGYKKIGEGEKAIEVYKVMESEGVKPDDVTMI 186
Query: 160 SVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKER 219
++SS LG + + + V + + ++ L++M+ C + EAR +FD +++R
Sbjct: 187 GLVSSCAMLGDLNRGKEFYEYVKANGLRMTIPLANALMDMFSKCGDIHEARRIFDNLEKR 246
Query: 220 NIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAML 279
IVS +LF+ + KDVV W MI G +Q +R +AL +++ M
Sbjct: 247 TIVS------------------KLFDDMEEKDVVMWNAMIGGSVQAKRSQDALALFQEMQ 288
Query: 280 CDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRIN 339
P+++ ++ +SAC + A G+ IH I K + +++ YA CG I+
Sbjct: 289 TSNTDPDEITMIHCLSACSQLGALDVGIWIHRYIEKHSLSLNVALGTSLVDMYAKCGNIS 348
Query: 340 LARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQ 399
+A +F+ +Q R+ +++A+I G A +
Sbjct: 349 -------------------------------EALCVFHGIQTRNSLTYTAIIGGLALHGD 377
Query: 400 PNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYV--LNNSITLNDNLS 457
+ A+ F+ M+DAG+ P+EIT + + A G ++ GR +Y + + LN L
Sbjct: 378 ASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGR---DYFSQMKSRFNLNPQLK 434
Query: 458 --AAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDL 513
+ ++D+ + G + A ++ + + W A++ G MHG+ L K L
Sbjct: 435 HYSIMVDLLGRAGLLEEADKLMESM-PMEADAAVWGALLFGCRMHGNVKLGEKAAKKL 491
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/376 (21%), Positives = 163/376 (43%), Gaps = 88/376 (23%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
++ ++ + C+ +++G++ + + +GL + N+L+++++KCG I +A+ +FD
Sbjct: 182 DVTMIGLVSSCAMLGDLNRGKEFYEYVKANGLRMTIPLANALMDMFSKCGDIHEARRIFD 241
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+ V+ ++FD K V + +MI G Q ++AL +
Sbjct: 242 NLEKRTIVS------------------KLFDDMEEKDVVMWNAMIGGSVQAKRSQDALAL 283
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLG----GIWECRMLHGLVIKLMIDGFVIISTNLLN 198
F++M+ P+E+T+ +S+ LG GIW +H + K + V + T+L++
Sbjct: 284 FQEMQTSNTDPDEITMIHCLSACSQLGALDVGIW----IHRYIEKHSLSLNVALGTSLVD 339
Query: 199 MYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTM 258
MY C ++ EA +F ++ RN +++ ++ G A G
Sbjct: 340 MYAKCGNISEALCVFHGIQTRNSLTYTAIIGGLALHG----------------------- 376
Query: 259 IDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGF 318
S A++ + M+ GIAP+++ + L+SAC H +++ G
Sbjct: 377 --------DASTAISYFNEMIDAGIAPDEITFIGLLSAC-----------CHGGMIQTGR 417
Query: 319 DCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNN 378
D +F R NL + ++ ++ R G++E+A +L +
Sbjct: 418 D----------YFSQMKSRFNL---------NPQLKHYSIMVDLLGRAGLLEEADKLMES 458
Query: 379 MQ-KRDVYSWSAMISG 393
M + D W A++ G
Sbjct: 459 MPMEADAAVWGALLFG 474
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/244 (20%), Positives = 112/244 (45%), Gaps = 22/244 (9%)
Query: 374 QLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGV---KPNEITMVSVFCAIA 430
++ ++ + +SW+ I G++++E P A+ + M+ G +P+ T +F A
Sbjct: 33 KILKGIENPNAFSWNVTIRGFSESENPKDAVLAYKQMLRRGCCESRPDHFTYPVLFKVCA 92
Query: 431 SSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYH--IRDRTTSVS 488
G +V + L ++ A I M+A CG + A +VF +RD +
Sbjct: 93 DLRLNSLGHMILGHVFKLRLELVSHVHNASIHMFASCGEMENARKVFDESPVRDLVS--- 149
Query: 489 PWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSM 548
WN +I G G+ +++Y +E +K + +T IG++S+C G ++ G+ +++ +
Sbjct: 150 -WNCLINGYKKIGEGEKAIEVYKVMESEGVKPDDVTMIGLVSSCAMLGDLNRGKEFYEYV 208
Query: 549 KSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKA------------DVVIWGTL 596
K+ + + ++D+ + G + +A + ++ + DVV+W +
Sbjct: 209 KA-NGLRMTIPLANALMDMFSKCGDIHEARRIFDNLEKRTIVSKLFDDMEEKDVVMWNAM 267
Query: 597 LAAS 600
+ S
Sbjct: 268 IGGS 271
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 104/256 (40%), Gaps = 73/256 (28%)
Query: 13 QKANLQNSDY-ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKC 71
Q+ N+D E+ ++ L CS A+ G IH I K L N + SL+++YAKC
Sbjct: 285 QEMQTSNTDPDEITMIHCLSACSQLGALDVGIWIHRYIEKHSLSLNVALGTSLVDMYAKC 344
Query: 72 GLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFA 131
G IS+A +F T RN ++YT++I G A
Sbjct: 345 GNISEALCVFHGIQT--------------RNS-----------------LTYTAIIGGLA 373
Query: 132 QNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVI 191
+ A+ F +M G+ P+E+T ++S+ H G +
Sbjct: 374 LHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGG---------------------M 412
Query: 192 ISTNLLNMYCVCSSLVEARSLFDEMKER-----NIVSWNVMLNGFAKAGLVELARELFER 246
I T R F +MK R + +++M++ +AGL+E A +L E
Sbjct: 413 IQT--------------GRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADKLMES 458
Query: 247 IPSK-DVVSWGTMIDG 261
+P + D WG ++ G
Sbjct: 459 MPMEADAAVWGALLFG 474
>gi|147790745|emb|CAN61464.1| hypothetical protein VITISV_005683 [Vitis vinifera]
Length = 785
Score = 327 bits (839), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 210/661 (31%), Positives = 329/661 (49%), Gaps = 101/661 (15%)
Query: 3 LDHFHSVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQN 62
+D +HS+ + ++ + Y V L+ CS +A+ G +IHS GLES+ F+
Sbjct: 94 IDLYHSMLH---LGVRPNKYTYPFV--LKACSGLLAIEDGVEIHSHAKMFGLESDVFVCT 148
Query: 63 SLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVS 122
+L++ YAKCG++ +A+ +F S S D VA N MI+G C
Sbjct: 149 ALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAG---------------------CSL 187
Query: 123 YTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVI 182
Y G +A+++ M+ G+ PN T+ V+ + + + LHG +
Sbjct: 188 Y-----GLCD-----DAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCV 237
Query: 183 KLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARE 242
+ D V++ T LL+MY C L+ AR+
Sbjct: 238 RRSFDNGVVVGTGLLDMYAKCQCLL-------------------------------YARK 266
Query: 243 LFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAM-LCDGIAPNDVMIVDLISACGRAM 301
+F+ + ++ VSW MI GY+ + + EAL ++ M L D + P V + ++ AC +
Sbjct: 267 IFDVMGVRNEVSWSAMIGGYVXSDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLT 326
Query: 302 AFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIA 361
G ++H I+K G + T++ YA CG I
Sbjct: 327 DLSRGRKLHCYIIKLGXVLDILLGNTLLSMYAKCGVI----------------------- 363
Query: 362 GFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEIT 421
+DA + F+ M +D S+SA++SG QN +AL +F M +G+ P+ T
Sbjct: 364 --------DDAIRFFDXMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTT 415
Query: 422 MVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIR 481
M+ V A + L+ G +H Y++ + + A+IDMY+KCG I+ A EVF +
Sbjct: 416 MLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRM- 474
Query: 482 DRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLG 541
DR VS WNA+I G +HG L ++ DL +K + ITFI +LS+C H+GLV G
Sbjct: 475 DRHDIVS-WNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEG 533
Query: 542 ERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASR 601
+F +M +++ P ++H CMVD+LGRAG +++A IR+MP + DV IW LL+A R
Sbjct: 534 RLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACR 593
Query: 602 IHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGF 661
IH N+E+GE +K + L P + VLLSNIY+ AGRW+DA IR +D G+K++PG
Sbjct: 594 IHKNIELGEEVSKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKIPGC 653
Query: 662 S 662
S
Sbjct: 654 S 654
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 155/615 (25%), Positives = 266/615 (43%), Gaps = 89/615 (14%)
Query: 60 IQNSLINLYAKC---GLISQAKSM----FDSCSTLDPVACNIMISGYIRNDRLNDAREVF 112
++N+ ++L C +++AK + + S D + + Y+ +++ AR +F
Sbjct: 7 VKNNYLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLF 66
Query: 113 DKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIW 172
D+ P + + +I +A N + A++++ M LGV PN+ T V+ + L I
Sbjct: 67 DEIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIE 126
Query: 173 ECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFA 232
+ +H ++ V + T L++ Y C LVEA+ LF M R++V+WN M+ G +
Sbjct: 127 DGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCS 186
Query: 233 KAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVD 292
GL + +A+ + M +GI PN IV
Sbjct: 187 LYGLCD-------------------------------DAVQLIMQMQEEGICPNSSTIVG 215
Query: 293 LISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFE-LGIKD 351
++ G A A G G +H V+ FD + ++ YA C + AR F+ +G+++
Sbjct: 216 VLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRN 275
Query: 352 HIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMV 411
+ SW+A+I G++ + +++A +LF+ M +D
Sbjct: 276 EV-SWSAMIGGYVXSDCMKEALELFDQMILKD---------------------------- 306
Query: 412 DAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSIN 471
+ P +T+ SV A A L GR H Y++ L+ L ++ MYAKCG I+
Sbjct: 307 --AMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGXVLDILLGNTLLSMYAKCGVID 364
Query: 472 TAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLST 531
A F+ + SVS ++AI+ G +G+A + L I+ ++ I + T +GVL
Sbjct: 365 DAIR-FFDXMNPKDSVS-FSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPA 422
Query: 532 CCHAGLVDLGERYFKSMKS--VYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKAD 589
C H + G F S V D ++D+ + G++ A EV M + D
Sbjct: 423 CSHLAALQHG---FCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMD-RHD 478
Query: 590 VVIWGTLLAASRIHG-NVEVGERAAKSLA-GLQPSHGPSRVLLSN-----IYADAGRWED 642
+V W ++ IHG +E LA GL+P LLS+ + + W D
Sbjct: 479 IVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFD 538
Query: 643 A----FSIRKEMRDC 653
A FSI M C
Sbjct: 539 AMSRDFSIVPRMEHC 553
>gi|222617261|gb|EEE53393.1| hypothetical protein OsJ_36441 [Oryza sativa Japonica Group]
Length = 1151
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 203/639 (31%), Positives = 315/639 (49%), Gaps = 95/639 (14%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+ + S L C++ + +G Q+HS +FK+G+ S+ ++ SL++LY KCG + A +F+S
Sbjct: 245 VTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNS 304
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
+DR N V + M++ F Q + ++ E+F
Sbjct: 305 ------------------SDRTN-------------VVLWNLMLVAFGQINDLAKSFELF 333
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
M+ G+ PN+ T ++ + I +H L +K + + +S L++MY
Sbjct: 334 CQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMY--- 390
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYL 263
+K G +E AR + E + KDVVSW +MI GY+
Sbjct: 391 ----------------------------SKYGWLEKARRVLEMLKEKDVVSWTSMIAGYV 422
Query: 264 QVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDF 323
Q E +AL ++ M GI P+++ + IS C A +GLQIH+ I +G+
Sbjct: 423 QHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYS---- 478
Query: 324 IQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRD 383
++ WNAL+ + R G I +A F M+ +D
Sbjct: 479 ---------------------------GDVSIWNALVNLYARCGRIREAFSSFEEMELKD 511
Query: 384 VYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHE 443
+ + ++SG+AQ+ AL++F M +GVK N T VS A A+ +K+G+ H
Sbjct: 512 GITGNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHA 571
Query: 444 YVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDA 503
V+ + + A+I +Y KCGS A F + +R VS WN II + HG
Sbjct: 572 RVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERN-EVS-WNTIITSCSQHGRG 629
Query: 504 NLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGC 563
L ++ ++K IK N +TFIGVL+ C H GLV+ G YFKSM Y + P HY C
Sbjct: 630 LEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYAC 689
Query: 564 MVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSH 623
++D+ GRAGQL+ A++ I MP+ AD ++W TLL+A ++H N+EVGE AAK L L+P
Sbjct: 690 VIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLSACKVHKNIEVGEFAAKHLLELEPHD 749
Query: 624 GPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
S VLLSN YA +W + +RK MRD G+++ PG S
Sbjct: 750 SASYVLLSNAYAVTEKWANRDQVRKMMRDRGVRKEPGRS 788
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 112/428 (26%), Positives = 194/428 (45%), Gaps = 68/428 (15%)
Query: 177 LHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGL 236
+H + + + I+ L+++Y ++ AR +F+E+ R+ VSW ML+G+A+ GL
Sbjct: 64 IHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGL 123
Query: 237 VELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISA 296
E EAL +YR M G+ P ++ ++S+
Sbjct: 124 GE-------------------------------EALGLYRQMHRAGVVPTPYVLSSVLSS 152
Query: 297 CGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQF-ELGIKDHIAS 355
C +A F +G IH+ K GF F+ +I Y CG LA F ++ +D + +
Sbjct: 153 CTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTV-T 211
Query: 356 WNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGV 415
+N LI+G + G E ALE+F M +G+
Sbjct: 212 FNTLISGHAQCGHGEH-------------------------------ALEIFEEMQFSGL 240
Query: 416 KPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFE 475
P+ +T+ S+ A AS G L++G H Y+ I+ + + +++D+Y KCG + TA
Sbjct: 241 SPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETAL- 299
Query: 476 VFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHA 535
V ++ DR T+V WN ++ D + +++ ++ I+ N T+ +L TC
Sbjct: 300 VIFNSSDR-TNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCT 358
Query: 536 GLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGT 595
+DLGE+ S+ E D+ G ++D+ + G LE A V+ + K DVV W +
Sbjct: 359 REIDLGEQ-IHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEK-DVVSWTS 416
Query: 596 LLAASRIH 603
++A H
Sbjct: 417 MIAGYVQH 424
>gi|357165485|ref|XP_003580399.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Brachypodium distachyon]
Length = 886
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 196/622 (31%), Positives = 326/622 (52%), Gaps = 38/622 (6%)
Query: 44 QIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRND 103
Q+ L+ K + + +Q +L+++ +CG + A F + N M+ GY ++
Sbjct: 180 QLLGLLSKFDSQDDPDVQTALVDMLVRCGAMDFASKQFSRIKNPTIICRNSMLVGYAKSH 239
Query: 104 RLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVIS 163
++ A E+F P + VS+ +I +++ REAL++ DM GV P+ T S ++
Sbjct: 240 GVDHALEIFKSMPERDVVSWNMVISALSKSGRVREALDMVVDMHGKGVRPDSTTYTSSLT 299
Query: 164 SSVHLGGIWECRMLHGLVIKLM--IDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNI 221
+ L + + LH VI+ + ID +V S++VE
Sbjct: 300 ACARLSSLEWGKQLHVQVIRNLPHIDPYV------------ASAMVEL------------ 335
Query: 222 VSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCD 281
+AK G + A+ +F + ++ VSW +I G+LQ SE++ ++ M +
Sbjct: 336 ---------YAKCGCFKEAKRVFSSLRDRNSVSWTVLIGGFLQYGCFSESVELFNQMRAE 386
Query: 282 GIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLA 341
+A + + LIS C M G Q+HS+ +K+G + ++I YA CG + A
Sbjct: 387 LMAVDQFALATLISGCCNTMDICLGSQLHSLCLKSGHTRAVVVSNSLISMYAKCGNLQNA 446
Query: 342 RLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPN 401
L F + I SW +I + + G I AR+ F++M R+V +W+AM+ Y Q+
Sbjct: 447 ELIFNFMAERDIVSWTGMITAYSQVGNIAKAREFFDDMSTRNVITWNAMLGAYIQHGAEE 506
Query: 402 MALELFHGMV-DAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAI 460
L+++ M+ + V P+ +T V++F A G K G + + + L+ ++ A+
Sbjct: 507 DGLKMYSDMLTEKDVIPDWVTYVTLFRGCADIGANKLGDQIIGHTVKVGLILDTSVVNAV 566
Query: 461 IDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKL 520
I MY+KCG I+ A + F + R VS WNA+I G + HG ++I+ D+ + K
Sbjct: 567 ITMYSKCGRISEARKAFDFL-SRKDLVS-WNAMITGYSQHGMGKQAIEIFDDILNKGAKP 624
Query: 521 NSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEV 580
+ I+++ VLS C H+GLV+ G+ YF MK +N+ P L+H+ CMVDLLGRAG L +A+ +
Sbjct: 625 DYISYVAVLSGCSHSGLVEEGKFYFDMMKRDHNISPGLEHFSCMVDLLGRAGHLIEAKNL 684
Query: 581 IRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRW 640
I MPMK +WG LL+A + HGN ++ E AAK L L +LL+ +YADAG+
Sbjct: 685 IDEMPMKPTAEVWGALLSACKTHGNNDLAELAAKHLFDLDSPGSGGYMLLAKMYADAGKS 744
Query: 641 EDAFSIRKEMRDCGMKRLPGFS 662
+D+ +RK MRD G+K+ PG+S
Sbjct: 745 DDSAQVRKLMRDKGIKKSPGYS 766
Score = 218 bits (555), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 158/588 (26%), Positives = 280/588 (47%), Gaps = 17/588 (2%)
Query: 25 ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMF-DS 83
AL ALR C A A++ + +HS + GL S F+QN+L++ Y CG +S A+++ D
Sbjct: 27 ALADALRSCGARSALTGARTLHSRLINVGLASVVFLQNTLLHAYLSCGALSDARNLLRDE 86
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
+ + + NIM++GY + L+DA E+F + P + S+ +++ G+ Q+ + AL++F
Sbjct: 87 ITEPNVITHNIMMNGYAKLGSLSDAVELFGRMPTRDVASWNTIMSGYYQSGQFLNALDIF 146
Query: 144 RDMRILG-VIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
MR G +PN T V+ S LG L GL+ K + T L++M
Sbjct: 147 VSMRQTGDSLPNAFTFGCVMKSCGALGWHEVALQLLGLLSKFDSQDDPDVQTALVDMLVR 206
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
C ++ A F +K I+ N ML G+AK+ V+ A E+F+ +P +DVVSW +I
Sbjct: 207 CGAMDFASKQFSRIKNPTIICRNSMLVGYAKSHGVDHALEIFKSMPERDVVSWNMVISAL 266
Query: 263 LQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD 322
+ R+ EAL M M G+ P+ ++AC R + G Q+H +++
Sbjct: 267 SKSGRVREALDMVVDMHGKGVRPDSTTYTSSLTACARLSSLEWGKQLHVQVIRNLPHIDP 326
Query: 323 FIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKR 382
++ + ++ YA CG A+ F + SW LI GF++ G ++ +LFN M+
Sbjct: 327 YVASAMVELYAKCGCFKEAKRVFSSLRDRNSVSWTVLIGGFLQYGCFSESVELFNQMRAE 386
Query: 383 ----DVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG 438
D ++ + +ISG + +L + +G + S+ A G L+
Sbjct: 387 LMAVDQFALATLISGCCNTMDICLGSQLHSLCLKSGHTRAVVVSNSLISMYAKCGNLQNA 446
Query: 439 RWAHEYVLNNSITLNDNLS-AAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGL 497
++ N + D +S +I Y++ G+I A E F + R +V WNA++
Sbjct: 447 E-----LIFNFMAERDIVSWTGMITAYSQVGNIAKAREFFDDMSTR--NVITWNAMLGAY 499
Query: 498 AMHGDANLTLKIYSD-LEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEP 556
HG LK+YSD L ++++ + +T++ + C G LG++ V +
Sbjct: 500 IQHGAEEDGLKMYSDMLTEKDVIPDWVTYVTLFRGCADIGANKLGDQIIGHTVKV-GLIL 558
Query: 557 DLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHG 604
D ++ + + G++ +A + + K D+V W ++ HG
Sbjct: 559 DTSVVNAVITMYSKCGRISEARKAFDFLSRK-DLVSWNAMITGYSQHG 605
Score = 122 bits (305), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 139/260 (53%), Gaps = 10/260 (3%)
Query: 9 VFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLY 68
+FN +A L D + AL + + C + + G Q+HSL KSG + NSLI++Y
Sbjct: 379 LFNQMRAELMAVD-QFALATLISGCCNTMDICLGSQLHSLCLKSGHTRAVVVSNSLISMY 437
Query: 69 AKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIM 128
AKCG + A+ +F+ + D V+ MI+ Y + + ARE FD + +++ +M+
Sbjct: 438 AKCGNLQNAELIFNFMAERDIVSWTGMITAYSQVGNIAKAREFFDDMSTRNVITWNAMLG 497
Query: 129 GFAQNDCWREALEVFRDMRI-LGVIPNEVTLASVISSSVHLGG--IWECRMLHGLVIKLM 185
+ Q+ + L+++ DM VIP+ VT ++ +G + + + H + + L+
Sbjct: 498 AYIQHGAEEDGLKMYSDMLTEKDVIPDWVTYVTLFRGCADIGANKLGDQIIGHTVKVGLI 557
Query: 186 IDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFE 245
+D V+ ++ MY C + EAR FD + +++VSWN M+ G+++ G+ + A E+F+
Sbjct: 558 LDTSVV--NAVITMYSKCGRISEARKAFDFLSRKDLVSWNAMITGYSQHGMGKQAIEIFD 615
Query: 246 RIPSK----DVVSWGTMIDG 261
I +K D +S+ ++ G
Sbjct: 616 DILNKGAKPDYISYVAVLSG 635
>gi|225444752|ref|XP_002278169.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 596
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 181/448 (40%), Positives = 260/448 (58%), Gaps = 10/448 (2%)
Query: 219 RNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVS-WGTMIDGYLQVER---LSEALTM 274
R I+S++ + +G ++ A L R + V + T I G+ + R L ++ +
Sbjct: 24 RPIISFSAL----DPSGDIDYALLLLLRTSTPPTVFLFNTTIRGFSRARRPGSLLSSVLL 79
Query: 275 YRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAA 334
+ M +APN+ L C +AF G Q H +++K F+ F++ +II FY+
Sbjct: 80 FVRMGVLSLAPNNFTFTFLFQGCSNCVAFDLGRQFHGMVIKNSFEMDVFVRNSIIRFYSV 139
Query: 335 CGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGY 394
CGR+N AR F+ + + SWN++I G IRNG I +A LF+ M +R+ SW+ MISGY
Sbjct: 140 CGRLNDARWVFDESSELDVVSWNSMIDGCIRNGNILEALSLFSKMTERNDISWNMMISGY 199
Query: 395 AQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLND 454
AQN QP AL LF M +PN +VSV A + G L G W H Y+ + ++
Sbjct: 200 AQNGQPKEALALFREMQMLDQEPNSAILVSVLSACSQLGALDHGCWVHCYIGKKCVRVDS 259
Query: 455 NLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLE 514
LSAA+IDMYAKCGSI+ A + F R R VS + A I GLAM+G + L+++ ++
Sbjct: 260 ILSAALIDMYAKCGSIDLAMQAFSTSRKR--DVSAYTAAISGLAMNGCSEEALQLFEQMK 317
Query: 515 KRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQL 574
I + +++I VL C HAG V+ G YF SM V+ + P+L HY CMVDLLGRAG L
Sbjct: 318 GEGISPDGVSYIAVLCACSHAGWVEKGFHYFASMSDVHGIRPELDHYACMVDLLGRAGLL 377
Query: 575 EDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIY 634
E+AE+ + SMP+K D VIWG LL A R++GN E+G+R L +H +LLSNIY
Sbjct: 378 EEAEKFVASMPIKPDNVIWGALLGACRVYGNAEMGQRVGSLLVESDQNHDGRYILLSNIY 437
Query: 635 ADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
A++ + EDA +RK MR + R+PG S
Sbjct: 438 AESMKGEDAEQVRKTMRRRKVDRVPGCS 465
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/374 (25%), Positives = 174/374 (46%), Gaps = 35/374 (9%)
Query: 142 VFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYC 201
+F M +L + PN T + + R HG+VIK + V + +++ Y
Sbjct: 79 LFVRMGVLSLAPNNFTFTFLFQGCSNCVAFDLGRQFHGMVIKNSFEMDVFVRNSIIRFYS 138
Query: 202 VCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDG 261
VC L +AR +FDE E ++VSWN M++G + G + A LF ++ ++ +SW MI G
Sbjct: 139 VCGRLNDARWVFDESSELDVVSWNSMIDGCIRNGNILEALSLFSKMTERNDISWNMMISG 198
Query: 262 YLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCY 321
Y Q + EAL ++R M PN ++V ++SAC + A G +H I K
Sbjct: 199 YAQNGQPKEALALFREMQMLDQEPNSAILVSVLSACSQLGALDHGCWVHCYIGKKCVRVD 258
Query: 322 DFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQK 381
+ A +I YA CG I+LA F K ++++ A I+G NG E+A QLF M+
Sbjct: 259 SILSAALIDMYAKCGSIDLAMQAFSTSRKRDVSAYTAAISGLAMNGCSEEALQLFEQMKG 318
Query: 382 RDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWA 441
G+ P+ ++ ++V CA + +G +++G +
Sbjct: 319 E-------------------------------GISPDGVSYIAVLCACSHAGWVEKG-FH 346
Query: 442 HEYVLNNSITLNDNLS--AAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAM 499
+ +++ + L A ++D+ + G + A + + + +V W A++ +
Sbjct: 347 YFASMSDVHGIRPELDHYACMVDLLGRAGLLEEAEKFVASMPIKPDNVI-WGALLGACRV 405
Query: 500 HGDANLTLKIYSDL 513
+G+A + ++ S L
Sbjct: 406 YGNAEMGQRVGSLL 419
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 97/360 (26%), Positives = 169/360 (46%), Gaps = 62/360 (17%)
Query: 33 CSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVAC 92
CS +A G+Q H ++ K+ E + F++NS+I Y+ CG ++ A+ +FD S LD V+
Sbjct: 102 CSNCVAFDLGRQFHGMVIKNSFEMDVFVRNSIIRFYSVCGRLNDARWVFDESSELDVVSW 161
Query: 93 NIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVI 152
N MI G IRN + +A +F K + +S+ MI G+AQN +EAL +FR+M++L
Sbjct: 162 NSMIDGCIRNGNILEALSLFSKMTERNDISWNMMISGYAQNGQPKEALALFREMQMLDQE 221
Query: 153 PNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSL 212
PN L SV+S+ LG + +H + K + I+S L++MY C S+ A
Sbjct: 222 PNSAILVSVLSACSQLGALDHGCWVHCYIGKKCVRVDSILSAALIDMYAKCGSIDLAMQA 281
Query: 213 FDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEAL 272
F ++R++ ++ ++G A G E EAL
Sbjct: 282 FSTSRKRDVSAYTAAISGLAMNGCSE-------------------------------EAL 310
Query: 273 TMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFY 332
++ M +GI+P+ V + ++ AC H+ V+ GF H++
Sbjct: 311 QLFEQMKGEGISPDGVSYIAVLCACS-----------HAGWVEKGF-----------HYF 348
Query: 333 AACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ-KRDVYSWSAMI 391
A+ ++ GI+ + + ++ R G++E+A + +M K D W A++
Sbjct: 349 ASMSDVH--------GIRPELDHYACMVDLLGRAGLLEEAEKFVASMPIKPDNVIWGALL 400
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 92/235 (39%), Gaps = 62/235 (26%)
Query: 26 LVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCS 85
LVS L CS A+ G +H I K + ++ + +LI++YAKCG I A F +
Sbjct: 227 LVSVLSACSQLGALDHGCWVHCYIGKKCVRVDSILSAALIDMYAKCGSIDLAMQAFSTSR 286
Query: 86 TLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRD 145
D A YT+ I G A N C EAL++F
Sbjct: 287 KRDVSA-------------------------------YTAAISGLAMNGCSEEALQLFEQ 315
Query: 146 MRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSS 205
M+ G+ P+ V+ +V+ + H G W + H +S
Sbjct: 316 MKGEGISPDGVSYIAVLCACSHAG--WVEKGFHYF-----------------------AS 350
Query: 206 LVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSK-DVVSWGTMI 259
+ + + E+ + M++ +AGL+E A + +P K D V WG ++
Sbjct: 351 MSDVHGIRPELDH-----YACMVDLLGRAGLLEEAEKFVASMPIKPDNVIWGALL 400
>gi|225436683|ref|XP_002262885.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 866
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 210/630 (33%), Positives = 319/630 (50%), Gaps = 99/630 (15%)
Query: 34 SAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACN 93
+A AV +G Q+H+++ KSGL+S F+ NS++N+Y+K ++S
Sbjct: 204 AADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVS------------------ 245
Query: 94 IMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIP 153
DA+ VFD + VS+ SMI GF N EA E+F MR+ GV
Sbjct: 246 -------------DAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKL 292
Query: 154 NEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLF 213
+ A+VI ++ + + LH VIK D + I T L+ Y CS + +A LF
Sbjct: 293 TQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLF 352
Query: 214 DEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALT 273
M++G ++VVSW +I GY+Q R A+
Sbjct: 353 ------------CMMHGV------------------QNVVSWTAIISGYVQNGRTDRAMN 382
Query: 274 MYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYA 333
++ M +G+ PN +++A A QIH+++VK ++ + + Y+
Sbjct: 383 LFCQMRREGVRPNHFTYSTILTA----NAAVSPSQIHALVVKTNYENSPSVGTALSDSYS 438
Query: 334 ACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISG 393
G N A FEL + ++D+ +WSAM+SG
Sbjct: 439 KIGDANEAAKIFEL-------------------------------IDEKDIVAWSAMLSG 467
Query: 394 YAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIAS-SGTLKEGRWAHEYVLNNSITL 452
YAQ A+++F + GV+PNE T SV A A+ + ++++G+ H + + +
Sbjct: 468 YAQMGDIEGAVKIFLQLAKEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSGFSN 527
Query: 453 NDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSD 512
+S+A++ MYAK G+I +A EVF DR + WN++I G A HG +LKI+ +
Sbjct: 528 ALCVSSALVTMYAKRGNIESANEVFKRQVDR--DLVSWNSMISGYAQHGCGKKSLKIFEE 585
Query: 513 LEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAG 572
+ +N++L+ ITFIGV+S C HAGLV+ G+RYF M Y++ P ++HY CMVDL RAG
Sbjct: 586 MRSKNLELDGITFIGVISACTHAGLVNEGQRYFDLMVKDYHIVPTMEHYSCMVDLYSRAG 645
Query: 573 QLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSN 632
LE A ++I MP A IW TLLAA R+H NV++GE AA+ L LQP + VLLSN
Sbjct: 646 MLEKAMDLINKMPFPAGATIWRTLLAACRVHLNVQLGELAAEKLISLQPQDSAAYVLLSN 705
Query: 633 IYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
IYA AG W++ +RK M +K+ G+S
Sbjct: 706 IYATAGNWQERAKVRKLMDMKKVKKEAGYS 735
Score = 149 bits (375), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 125/560 (22%), Positives = 240/560 (42%), Gaps = 77/560 (13%)
Query: 108 AREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVH 167
++++FD+TP + ++ F++ND +EAL +F +R G + +L+ V+
Sbjct: 45 SQQLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGC 104
Query: 168 LGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVM 227
L + +H IK V + T+L++MY S+ + +FDEM+ +N+VSW +
Sbjct: 105 LFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSL 164
Query: 228 LNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPND 287
L G+ + GL E +AL ++ M +GI PN
Sbjct: 165 LAGYRQNGLNE-------------------------------QALKLFSQMQLEGIKPNP 193
Query: 288 VMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFEL 347
++ A +G+Q+H++++K+G D F+ ++++ Y+ ++ A+ F+
Sbjct: 194 FTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFDS 253
Query: 348 GIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELF 407
+ SWN++IAGF+ NG+ + A ELF
Sbjct: 254 MENRNAVSWNSMIAGFVTNGLDLE-------------------------------AFELF 282
Query: 408 HGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKC 467
+ M GVK + +V A+ + + H V+ N + N+ A++ Y+KC
Sbjct: 283 YRMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKC 342
Query: 468 GSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIG 527
I+ AF++F + VS W AII G +G + + ++ + + ++ N T+
Sbjct: 343 SEIDDAFKLFCMMHGVQNVVS-WTAIISGYVQNGRTDRAMNLFCQMRREGVRPNHFTYST 401
Query: 528 VLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMK 587
+L+ V + + +K+ Y P + + D + G +A ++ + K
Sbjct: 402 ILTA---NAAVSPSQIHALVVKTNYENSPSVG--TALSDSYSKIGDANEAAKIFELIDEK 456
Query: 588 ADVVIWGTLLAASRIHGNVEVGERAAKSLA--GLQPSHGPSRVLLSNIYADAGRWEDAFS 645
D+V W +L+ G++E + LA G++P+ +L+ A E
Sbjct: 457 -DIVAWSAMLSGYAQMGDIEGAVKIFLQLAKEGVEPNEFTFSSVLNACAAPTASVEQG-- 513
Query: 646 IRKEMRDCGMKRLPGFSGVV 665
K+ C +K GFS +
Sbjct: 514 --KQFHSCSIK--SGFSNAL 529
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 103/485 (21%), Positives = 204/485 (42%), Gaps = 105/485 (21%)
Query: 26 LVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSC- 84
+ ++ C+ +S +Q+H + K+G + + I+ +L+ Y+KC I A +F C
Sbjct: 297 FATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLF--CM 354
Query: 85 --STLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+ V+ +ISGY++N R + A+ +
Sbjct: 355 MHGVQNVVSWTAIISGYVQNGRTD-------------------------------RAMNL 383
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
F MR GV PN T +++++++ + +H LV+K + + T L + Y
Sbjct: 384 FCQMRREGVRPNHFTYSTILTANAAVSP----SQIHALVVKTNYENSPSVGTALSDSYSK 439
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
EA +F+ + E++IV+W+ ML+G+A+ G +E A ++F
Sbjct: 440 IGDANEAAKIFELIDEKDIVAWSAMLSGYAQMGDIEGAVKIF------------------ 481
Query: 263 LQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGE-GLQIHSIIVKAGFDCY 321
LQ+ + +G+ PN+ +++AC A E G Q HS +K+GF
Sbjct: 482 LQLAK-------------EGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSGFSNA 528
Query: 322 DFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQK 381
+ + ++ YA G I A F+ + + SWN++I+G+ ++G + + ++F M+
Sbjct: 529 LCVSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRS 588
Query: 382 RDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG-RW 440
++ LEL + IT + V A +G + EG R+
Sbjct: 589 KN--------------------LEL-----------DGITFIGVISACTHAGLVNEGQRY 617
Query: 441 AHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMH 500
V + I + ++D+Y++ G + A ++ + + W ++ +H
Sbjct: 618 FDLMVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKM-PFPAGATIWRTLLAACRVH 676
Query: 501 GDANL 505
+ L
Sbjct: 677 LNVQL 681
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 95/227 (41%), Gaps = 62/227 (27%)
Query: 23 ELALVSALRYCSAHIA-VSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMF 81
E S L C+A A V QG+Q HS KSG + + ++L+ +YAK G I A +F
Sbjct: 493 EFTFSSVLNACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVF 552
Query: 82 DSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALE 141
D V+ N MISGY AQ+ C +++L+
Sbjct: 553 KRQVDRDLVSWNSMISGY-------------------------------AQHGCGKKSLK 581
Query: 142 VFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYC 201
+F +MR + + +T VIS+ H G + E + LM+ + I+ T
Sbjct: 582 IFEEMRSKNLELDGITFIGVISACTHAGLVNEGQRY----FDLMVKDYHIVPT------- 630
Query: 202 VCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIP 248
+ ++ M++ +++AG++E A +L ++P
Sbjct: 631 -------------------MEHYSCMVDLYSRAGMLEKAMDLINKMP 658
>gi|357483509|ref|XP_003612041.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513376|gb|AES94999.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 518
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 172/469 (36%), Positives = 263/469 (56%), Gaps = 8/469 (1%)
Query: 203 CSSLVEARSLFDEMKERNIVSWNV----MLNGFAKAGLVEL--ARELFERIPSKDVVSWG 256
CS++ E + + ++ ++ + + +L +A L AR +F+RI S + V W
Sbjct: 21 CSNIGELKQIHGQLLKKGTIRHKLTVSRLLTTYASMEFSNLTYARMVFDRISSPNTVMWN 80
Query: 257 TMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKA 316
TMI Y EAL +Y ML I N L+ AC A E QIH I+K
Sbjct: 81 TMIRAYSNSNDPEEALLLYHQMLHHSIPHNAYTFPFLLKACSALSALAETHQIHVQIIKR 140
Query: 317 GFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLF 376
GF + +++ YA G I A + F+L I SWN +I G+I+ G +E A ++F
Sbjct: 141 GFGSEVYATNSLLRVYAISGSIKSAHVLFDLLPSRDIVSWNTMIDGYIKCGNVEMAYKIF 200
Query: 377 NNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLK 436
M +++V SW++MI G+ + AL L M+ AG+KP++IT+ A A G L+
Sbjct: 201 QAMPEKNVISWTSMIVGFVRTGMHKEALCLLQQMLVAGIKPDKITLSCSLSACAGLGALE 260
Query: 437 EGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICG 496
+G+W H Y+ N I ++ L A+IDMY KCG + A VF + + V W AII G
Sbjct: 261 QGKWIHTYIGKNKIKIDPVLGCALIDMYVKCGEMKKALLVFSKLEKKC--VYTWTAIIGG 318
Query: 497 LAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEP 556
A+HG + L ++ ++K IK S TF VL+ C H GLV+ G+ F+SM + YN++P
Sbjct: 319 FAVHGKGSEALDWFTQMQKAGIKPTSFTFTAVLTACSHTGLVEEGKSLFESMSTFYNMKP 378
Query: 557 DLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSL 616
++HYGCMVDLLGRAG L++A+E + SMP+K + IWG+LL A +H ++E+G+ K L
Sbjct: 379 VMEHYGCMVDLLGRAGFLKEAKEFVESMPIKPNAAIWGSLLNACHLHKHLELGKEIGKFL 438
Query: 617 AGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGVV 665
L P H + L++I+A AG W++A +R +++ G+ LPG S +
Sbjct: 439 IELDPEHDGRYIHLASIHAAAGEWDEASQVRSHIKNKGLLNLPGCSTIT 487
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 105/385 (27%), Positives = 172/385 (44%), Gaps = 50/385 (12%)
Query: 74 ISQAKSMFDSCST---LDPVACNIMISGYIRN----------------DRLNDAREVFDK 114
+ Q S+ + CS L + ++ G IR+ L AR VFD+
Sbjct: 11 VEQTMSLLERCSNIGELKQIHGQLLKKGTIRHKLTVSRLLTTYASMEFSNLTYARMVFDR 70
Query: 115 TPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWEC 174
V + +MI ++ ++ EAL ++ M + N T ++ + L + E
Sbjct: 71 ISSPNTVMWNTMIRAYSNSNDPEEALLLYHQMLHHSIPHNAYTFPFLLKACSALSALAET 130
Query: 175 RMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKA 234
+H +IK V + +LL +Y + S+ A LFD + R+IVSWN M++G+ K
Sbjct: 131 HQIHVQIIKRGFGSEVYATNSLLRVYAISGSIKSAHVLFDLLPSRDIVSWNTMIDGYIKC 190
Query: 235 GLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLI 294
G VE+A ++F+ +P K+V+SW +MI G+++ EAL + + ML GI P+ + + +
Sbjct: 191 GNVEMAYKIFQAMPEKNVISWTSMIVGFVRTGMHKEALCLLQQMLVAGIKPDKITLSCSL 250
Query: 295 SACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIA 354
SAC A +G IH+ I K + +I Y CG + A L F K +
Sbjct: 251 SACAGLGALEQGKWIHTYIGKNKIKIDPVLGCALIDMYVKCGEMKKALLVFSKLEKKCVY 310
Query: 355 SWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAG 414
+W A+I GF +G +A F MQK AG
Sbjct: 311 TWTAIIGGFAVHGKGSEALDWFTQMQK-------------------------------AG 339
Query: 415 VKPNEITMVSVFCAIASSGTLKEGR 439
+KP T +V A + +G ++EG+
Sbjct: 340 IKPTSFTFTAVLTACSHTGLVEEGK 364
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 87/308 (28%), Positives = 148/308 (48%), Gaps = 43/308 (13%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
L+ CSA A+++ QIH I K G S + NSL+ +YA G I A +FD + D
Sbjct: 118 LKACSALSALAETHQIHVQIIKRGFGSEVYATNSLLRVYAISGSIKSAHVLFDLLPSRDI 177
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
V+ N MI GYI+ + A ++F P K +S+TSMI+GF + +EAL + + M +
Sbjct: 178 VSWNTMIDGYIKCGNVEMAYKIFQAMPEKNVISWTSMIVGFVRTGMHKEALCLLQQMLVA 237
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
G+ P+++TL+ +S+ LG + + + +H + K I ++ L++MY C + +A
Sbjct: 238 GIKPDKITLSCSLSACAGLGALEQGKWIHTYIGKNKIKIDPVLGCALIDMYVKCGEMKKA 297
Query: 210 RSLFDEMKERNIVSWNVMLNGFA-----------------------------------KA 234
+F +++++ + +W ++ GFA
Sbjct: 298 LLVFSKLEKKCVYTWTAIIGGFAVHGKGSEALDWFTQMQKAGIKPTSFTFTAVLTACSHT 357
Query: 235 GLVELARELFERIPS----KDVVS-WGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVM 289
GLVE + LFE + + K V+ +G M+D + L EA +M I PN +
Sbjct: 358 GLVEEGKSLFESMSTFYNMKPVMEHYGCMVDLLGRAGFLKEAKEFVESM---PIKPNAAI 414
Query: 290 IVDLISAC 297
L++AC
Sbjct: 415 WGSLLNAC 422
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 101/240 (42%), Gaps = 62/240 (25%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
++ L +L C+ A+ QG+ IH+ I K+ ++ + + +LI++Y KCG
Sbjct: 243 KITLSCSLSACAGLGALEQGKWIHTYIGKNKIKIDPVLGCALIDMYVKCG---------- 292
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+ A VF K KC ++T++I GFA + EAL+
Sbjct: 293 ---------------------EMKKALLVFSKLEKKCVYTWTAIIGGFAVHGKGSEALDW 331
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
F M+ G+ P T +V+++ H G + E +
Sbjct: 332 FTQMQKAGIKPTSFTFTAVLTACSHTGLVEEGK--------------------------- 364
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSK-DVVSWGTMIDG 261
SL E+ S F MK + + M++ +AG ++ A+E E +P K + WG++++
Sbjct: 365 --SLFESMSTFYNMKPV-MEHYGCMVDLLGRAGFLKEAKEFVESMPIKPNAAIWGSLLNA 421
>gi|414587344|tpg|DAA37915.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
gi|414587345|tpg|DAA37916.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
Length = 920
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 199/641 (31%), Positives = 315/641 (49%), Gaps = 95/641 (14%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+ + S L C++ + +G+Q+HS + K+G+ + + SL++LY KCG I A +F+
Sbjct: 246 VTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFN- 304
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
DR N V + M++ + Q ++ E+F
Sbjct: 305 -----------------LGDRTN-------------VVLWNLMLVAYGQISDLAKSFEIF 334
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
M+ G+ PN+ T ++ + G I +H L IK + + +S L++MY
Sbjct: 335 GQMQATGIHPNQFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMY--- 391
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYL 263
+K G ++ AR++ E + +DVVSW +MI GY+
Sbjct: 392 ----------------------------SKYGCLDKARKILEMLEKRDVVSWTSMIAGYV 423
Query: 264 QVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDF 323
Q + EAL ++ M G+ P+++ + SAC A +GLQIH+ + +G
Sbjct: 424 QHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSG------ 477
Query: 324 IQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRD 383
YAA I+ WN L+ + R G E+A LF ++ +D
Sbjct: 478 --------YAA-----------------DISIWNTLVNLYARCGRSEEAFSLFREIEHKD 512
Query: 384 VYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHE 443
+W+ +ISG+ Q+ AL +F M AG K N T +S A+A+ +K+G+ H
Sbjct: 513 EITWNGLISGFGQSRLYKQALMVFMKMGQAGAKYNVFTFISAISALANLADIKQGKQVHG 572
Query: 444 YVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDA 503
+ T ++ A+I +Y KCGSI A +F + R WN II + HG
Sbjct: 573 RAVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNEV--SWNTIITSCSQHGRG 630
Query: 504 NLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGC 563
L ++ +++ +K N +TFIGVL+ C H GLV+ G YFKSM +VY + P HY C
Sbjct: 631 LEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSNVYGLNPIPDHYAC 690
Query: 564 MVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSH 623
+VD+LGRAGQL+ A + MP+ A+ +IW TLL+A ++H N+E+GE AAK L L+P
Sbjct: 691 VVDILGRAGQLDRARRFVDEMPITANAMIWRTLLSACKVHKNIEIGELAAKHLLELEPHD 750
Query: 624 GPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
S VLLSN YA G+W + +RK M+D G+++ PG S +
Sbjct: 751 SASYVLLSNAYAVTGKWANRDQVRKMMKDRGIRKEPGRSWI 791
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 126/463 (27%), Positives = 215/463 (46%), Gaps = 73/463 (15%)
Query: 225 NVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIA 284
N++++ +AK GLV AR++F+ + S+D VSW M+ GY Q EA +Y M +
Sbjct: 82 NLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQSGLGKEAFRLYSQMHWTAVI 141
Query: 285 PNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQ 344
P ++ ++SAC + F +G IH+ + K F F+ +I Y G LA
Sbjct: 142 PTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERV 201
Query: 345 F-ELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMA 403
F ++ D + ++N LI+G + G E A Q+F+ MQ
Sbjct: 202 FCDMLFCDRV-TFNTLISGHAQCGHGECALQIFDEMQL---------------------- 238
Query: 404 LELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDM 463
+G++P+ +T+ S+ A AS G L++G+ H Y+L ++ + +++D+
Sbjct: 239 ---------SGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDL 289
Query: 464 YAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSI 523
Y KCG I TA ++F ++ DR T+V WN ++ D + +I+ ++ I N
Sbjct: 290 YVKCGDIETAHDIF-NLGDR-TNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNQF 347
Query: 524 TFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRS 583
T+ +L TC G ++LGE+ S+ E D+ G ++D+ + G L+ A +++
Sbjct: 348 TYPCILRTCTCTGQIELGEQ-IHSLSIKNGFESDMYVSGVLIDMYSKYGCLDKARKILE- 405
Query: 584 MPMKADVVIWGTLLAASRIHGNVEVG-------------------ERAAKSLAGL----Q 620
M K DVV W +++A H E AA + AG+ Q
Sbjct: 406 MLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQ 465
Query: 621 PSHGPSRVLLS-------------NIYADAGRWEDAFSIRKEM 650
+RV +S N+YA GR E+AFS+ +E+
Sbjct: 466 GLQIHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREI 508
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 134/310 (43%), Gaps = 42/310 (13%)
Query: 294 ISAC-GRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQF-ELGIKD 351
+ AC GR + L+IH+ V G I +I YA G + AR F EL +D
Sbjct: 49 LQACRGRGNRWPLVLEIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRD 108
Query: 352 HIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMV 411
H+ SW A+++G+ ++G+ ++A +L++ M W+A+I
Sbjct: 109 HV-SWVAMLSGYAQSGLGKEAFRLYSQMH------WTAVI-------------------- 141
Query: 412 DAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSIN 471
P + SV A +GR H V + + A+I +Y GS
Sbjct: 142 -----PTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFK 196
Query: 472 TAFEVFYHIR--DRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVL 529
A VF + DR T +N +I G A G L+I+ +++ ++ + +T +L
Sbjct: 197 LAERVFCDMLFCDRVT----FNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLL 252
Query: 530 STCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKAD 589
+ C G + G++ + + D G ++DL + G +E A ++ ++ + +
Sbjct: 253 AACASVGDLQKGKQLHSYLLKA-GMSFDYITEGSLLDLYVKCGDIETAHDIF-NLGDRTN 310
Query: 590 VVIWGTLLAA 599
VV+W +L A
Sbjct: 311 VVLWNLMLVA 320
>gi|124360491|gb|ABN08501.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 575
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 177/481 (36%), Positives = 285/481 (59%), Gaps = 24/481 (4%)
Query: 196 LLNMYCVCSSLVEARSLF----DEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKD 251
+++ Y C + EA +LF D+ RN+++W M+ G AK G ++ AR F+++P +
Sbjct: 99 MISGYWKCGNEEEASTLFHVMGDQEISRNVITWTTMITGHAKKGNLKTARMYFDKMPERS 158
Query: 252 VVSWGTMIDGYLQVERLSEALTMYRAMLCDG-IAPNDVMIVDLISACGRAMAFGEGLQIH 310
VVSW M+ GY Q E + ++ ML G + P++ +IS+C + G+
Sbjct: 159 VVSWNAMLSGYAQGGAPEETIRLFNDMLSPGNVQPDETTWATVISSCS---SLGDPCLSE 215
Query: 311 SIIVK----AGFDCYDFIQATIIHFYAACGRINLARLQFE-LGIKDHIAS--WNALIAGF 363
SI+ K GF F++ ++ +A CG + A FE LG+ + +S WNA+I+ +
Sbjct: 216 SIVRKLDDKVGFRPNYFVKTALLDMHAKCGNLEAAHKIFEQLGVYKYRSSVPWNAMISAY 275
Query: 364 IRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDA--GVKPNEIT 421
R G + A+ LF+ M +RD SW++MI+GY QN + A++LF M+ + KP+E+T
Sbjct: 276 ARVGDLPSAKHLFDKMPQRDTVSWNSMIAGYTQNGESFKAIKLFEEMISSEDSRKPDEVT 335
Query: 422 MVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIR 481
MVSVF A G L G WA + N I ++ ++ ++I+MY++CGS+ A +F +
Sbjct: 336 MVSVFSACGHLGELGLGNWAVSILKVNHIQISISVYNSLINMYSRCGSMQDAVLIFQEMA 395
Query: 482 DRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLG 541
R + +N +I G A HG ++++ S +++ I+ + IT+I +L+ C HAGL+D G
Sbjct: 396 TR--DLVSYNTLISGFAEHGHGMESIELLSKMKEDGIEPDRITYIAILTACSHAGLLDEG 453
Query: 542 ERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASR 601
+R F+S+K PD+ HY CM+D+LGRAG+LE+A ++I+SMPM+ I+G+LL A+
Sbjct: 454 QRLFESIKF-----PDVDHYACMIDMLGRAGRLEEAMKLIQSMPMEPHAGIYGSLLNATS 508
Query: 602 IHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGF 661
IH VE+GE AA L ++P + + LLSNIYA AGRW++ +R MR G+K+ G
Sbjct: 509 IHKQVELGELAAAKLFKVEPHNSGNYALLSNIYASAGRWKEGDKVRDTMRKQGVKKTTGL 568
Query: 662 S 662
S
Sbjct: 569 S 569
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 134/476 (28%), Positives = 222/476 (46%), Gaps = 89/476 (18%)
Query: 49 IFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGY--------- 99
+ KSG + + +++N ++ +YAK G I A+ +FD N+MISGY
Sbjct: 53 VLKSGYDRDHYVRNGILGIYAKYGPIEFARKLFDEMPDRTVADWNVMISGYWKCGNEEEA 112
Query: 100 --------------------------IRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQN 133
+ L AR FDK P + VS+ +M+ G+AQ
Sbjct: 113 STLFHVMGDQEISRNVITWTTMITGHAKKGNLKTARMYFDKMPERSVVSWNAMLSGYAQG 172
Query: 134 DCWREALEVFRDMRILG-VIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMID--GF- 189
E + +F DM G V P+E T A+VISS LG C L +++ + D GF
Sbjct: 173 GAPEETIRLFNDMLSPGNVQPDETTWATVISSCSSLGD--PC--LSESIVRKLDDKVGFR 228
Query: 190 --VIISTNLLNMYCVCSSLVEARSLFDEM---KERNIVSWNVMLNGFAKAGLVELARELF 244
+ T LL+M+ C +L A +F+++ K R+ V WN M++ +A+ G + A+ LF
Sbjct: 229 PNYFVKTALLDMHAKCGNLEAAHKIFEQLGVYKYRSSVPWNAMISAYARVGDLPSAKHLF 288
Query: 245 ERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLC--DGIAPNDVMIVDLISACGRAMA 302
+++P +D VSW +MI GY Q +A+ ++ M+ D P++V +V + SACG
Sbjct: 289 DKMPQRDTVSWNSMIAGYTQNGESFKAIKLFEEMISSEDSRKPDEVTMVSVFSACGHLGE 348
Query: 303 FGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQF-ELGIKDHIASWNALIA 361
G G SI+ + ++I+ Y+ CG + A L F E+ +D + S+N LI+
Sbjct: 349 LGLGNWAVSILKVNHIQISISVYNSLINMYSRCGSMQDAVLIFQEMATRD-LVSYNTLIS 407
Query: 362 GFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEIT 421
GF +G + M+ ++EL M + G++P+ IT
Sbjct: 408 GFAEHG---------HGME----------------------SIELLSKMKEDGIEPDRIT 436
Query: 422 MVSVFCAIASSGTLKEGRWAHEYVLNNSITLND-NLSAAIIDMYAKCGSINTAFEV 476
+++ A + +G L EG+ L SI D + A +IDM + G + A ++
Sbjct: 437 YIAILTACSHAGLLDEGQ-----RLFESIKFPDVDHYACMIDMLGRAGRLEEAMKL 487
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 93/320 (29%), Positives = 151/320 (47%), Gaps = 49/320 (15%)
Query: 51 KSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTL---DPVACNIMISGYIRNDRLND 107
K G N F++ +L++++AKCG + A +F+ V N MIS Y R L
Sbjct: 224 KVGFRPNYFVKTALLDMHAKCGNLEAAHKIFEQLGVYKYRSSVPWNAMISAYARVGDLPS 283
Query: 108 AREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDM--RILGVIPNEVTLASVISSS 165
A+ +FDK P + VS+ SMI G+ QN +A+++F +M P+EVT+ SV S+
Sbjct: 284 AKHLFDKMPQRDTVSWNSMIAGYTQNGESFKAIKLFEEMISSEDSRKPDEVTMVSVFSAC 343
Query: 166 VHLG----GIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNI 221
HLG G W +L I++ I + +L+NMY C S+ +A +F EM R++
Sbjct: 344 GHLGELGLGNWAVSILKVNHIQISIS----VYNSLINMYSRCGSMQDAVLIFQEMATRDL 399
Query: 222 VSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCD 281
VS+N +++GFA+ G G +E LS+ M D
Sbjct: 400 VSYNTLISGFAEHG------------------------HGMESIELLSK-------MKED 428
Query: 282 GIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLA 341
GI P+ + + +++AC A EG ++ I D Y A +I GR+ A
Sbjct: 429 GIEPDRITYIAILTACSHAGLLDEGQRLFESIKFPDVDHY----ACMIDMLGRAGRLEEA 484
Query: 342 -RLQFELGIKDHIASWNALI 360
+L + ++ H + +L+
Sbjct: 485 MKLIQSMPMEPHAGIYGSLL 504
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 103/425 (24%), Positives = 189/425 (44%), Gaps = 88/425 (20%)
Query: 258 MIDGYLQVERLSEA-LTMYRAML--CDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIV 314
M+ Y Q+ S+ +++++ ML CD I PN ++ + G E + + ++
Sbjct: 1 MLKYYSQIGVHSQVFVSLFKHMLQHCD-IKPNASFYSVMMKSAG-----SESMLFLAHVL 54
Query: 315 KAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGF----------- 363
K+G+D +++ I+ YA G I AR F+ +A WN +I+G+
Sbjct: 55 KSGYDRDHYVRNGILGIYAKYGPIEFARKLFDEMPDRTVADWNVMISGYWKCGNEEEAST 114
Query: 364 ------------------------IRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQ 399
+ G ++ AR F+ M +R V SW+AM+SGYAQ
Sbjct: 115 LFHVMGDQEISRNVITWTTMITGHAKKGNLKTARMYFDKMPERSVVSWNAMLSGYAQGGA 174
Query: 400 PNMALELFHGMVDAG-VKPNEITMVSVFCAIASSGTLKEGRWAHEYV--LNNSITLNDN- 455
P + LF+ M+ G V+P+E T +V I+S +L + + V L++ + N
Sbjct: 175 PEETIRLFNDMLSPGNVQPDETTWATV---ISSCSSLGDPCLSESIVRKLDDKVGFRPNY 231
Query: 456 -LSAAIIDMYAKCGSINTAFEVFYHIR-DRTTSVSPWNAIICGLAMHGDANLTLKIYSDL 513
+ A++DM+AKCG++ A ++F + + S PWNA+I A GD ++ +
Sbjct: 232 FVKTALLDMHAKCGNLEAAHKIFEQLGVYKYRSSVPWNAMISAYARVGDLPSAKHLFDKM 291
Query: 514 EKRNI---------------------------------KLNSITFIGVLSTCCHAGLVDL 540
+R+ K + +T + V S C H G + L
Sbjct: 292 PQRDTVSWNSMIAGYTQNGESFKAIKLFEEMISSEDSRKPDEVTMVSVFSACGHLGELGL 351
Query: 541 GERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAAS 600
G + S+ V +++ + Y ++++ R G ++DA + + M + D+V + TL++
Sbjct: 352 G-NWAVSILKVNHIQISISVYNSLINMYSRCGSMQDAVLIFQEMATR-DLVSYNTLISGF 409
Query: 601 RIHGN 605
HG+
Sbjct: 410 AEHGH 414
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 124/298 (41%), Gaps = 20/298 (6%)
Query: 350 KDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHG 409
+DH N ++ + + G IE AR+LF+ M R V W+ MISGY + A LFH
Sbjct: 60 RDHYVR-NGILGIYAKYGPIEFARKLFDEMPDRTVADWNVMISGYWKCGNEEEASTLFHV 118
Query: 410 MVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGS 469
M D + N IT ++ A G LK R + + S+ + A++ YA+ G+
Sbjct: 119 MGDQEISRNVITWTTMITGHAKKGNLKTARMYFDKMPERSVVSWN----AMLSGYAQGGA 174
Query: 470 INTAFEVFYHI-------RDRTTSVSPWNAIICGLAMHGDANLTLKIYSDL-EKRNIKLN 521
+F + D TT W +I + GD L+ I L +K + N
Sbjct: 175 PEETIRLFNDMLSPGNVQPDETT----WATVISSCSSLGDPCLSESIVRKLDDKVGFRPN 230
Query: 522 SITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVI 581
+L G ++ + F+ + VY + + M+ R G L A+ +
Sbjct: 231 YFVKTALLDMHAKCGNLEAAHKIFEQL-GVYKYRSSVP-WNAMISAYARVGDLPSAKHLF 288
Query: 582 RSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGR 639
MP + D V W +++A +G + + + + S P V + ++++ G
Sbjct: 289 DKMPQR-DTVSWNSMIAGYTQNGESFKAIKLFEEMISSEDSRKPDEVTMVSVFSACGH 345
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/226 (19%), Positives = 92/226 (40%), Gaps = 66/226 (29%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E+ +VS C + G S++ + ++ + + NSLIN+Y++CG
Sbjct: 333 EVTMVSVFSACGHLGELGLGNWAVSILKVNHIQISISVYNSLINMYSRCG---------- 382
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+ DA +F + + VSY ++I GFA++ E++E+
Sbjct: 383 ---------------------SMQDAVLIFQEMATRDLVSYNTLISGFAEHGHGMESIEL 421
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
M+ G+ P+ +T +++++ H G LL+
Sbjct: 422 LSKMKEDGIEPDRITYIAILTACSHAG--------------------------LLD---- 451
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIP 248
E + LF+ +K ++ + M++ +AG +E A +L + +P
Sbjct: 452 -----EGQRLFESIKFPDVDHYACMIDMLGRAGRLEEAMKLIQSMP 492
>gi|357507465|ref|XP_003624021.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499036|gb|AES80239.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 632
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 177/481 (36%), Positives = 285/481 (59%), Gaps = 24/481 (4%)
Query: 196 LLNMYCVCSSLVEARSLF----DEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKD 251
+++ Y C + EA +LF D+ RN+++W M+ G AK G ++ AR F+++P +
Sbjct: 156 MISGYWKCGNEEEASTLFHVMGDQEISRNVITWTTMITGHAKKGNLKTARMYFDKMPERS 215
Query: 252 VVSWGTMIDGYLQVERLSEALTMYRAMLCDG-IAPNDVMIVDLISACGRAMAFGEGLQIH 310
VVSW M+ GY Q E + ++ ML G + P++ +IS+C + G+
Sbjct: 216 VVSWNAMLSGYAQGGAPEETIRLFNDMLSPGNVQPDETTWATVISSCS---SLGDPCLSE 272
Query: 311 SIIVK----AGFDCYDFIQATIIHFYAACGRINLARLQFE-LGIKDHIAS--WNALIAGF 363
SI+ K GF F++ ++ +A CG + A FE LG+ + +S WNA+I+ +
Sbjct: 273 SIVRKLDDKVGFRPNYFVKTALLDMHAKCGNLEAAHKIFEQLGVYKYRSSVPWNAMISAY 332
Query: 364 IRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDA--GVKPNEIT 421
R G + A+ LF+ M +RD SW++MI+GY QN + A++LF M+ + KP+E+T
Sbjct: 333 ARVGDLPSAKHLFDKMPQRDTVSWNSMIAGYTQNGESFKAIKLFEEMISSEDSRKPDEVT 392
Query: 422 MVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIR 481
MVSVF A G L G WA + N I ++ ++ ++I+MY++CGS+ A +F +
Sbjct: 393 MVSVFSACGHLGELGLGNWAVSILKVNHIQISISVYNSLINMYSRCGSMQDAVLIFQEMA 452
Query: 482 DRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLG 541
R + +N +I G A HG ++++ S +++ I+ + IT+I +L+ C HAGL+D G
Sbjct: 453 TR--DLVSYNTLISGFAEHGHGMESIELLSKMKEDGIEPDRITYIAILTACSHAGLLDEG 510
Query: 542 ERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASR 601
+R F+S+K PD+ HY CM+D+LGRAG+LE+A ++I+SMPM+ I+G+LL A+
Sbjct: 511 QRLFESIKF-----PDVDHYACMIDMLGRAGRLEEAMKLIQSMPMEPHAGIYGSLLNATS 565
Query: 602 IHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGF 661
IH VE+GE AA L ++P + + LLSNIYA AGRW++ +R MR G+K+ G
Sbjct: 566 IHKQVELGELAAAKLFKVEPHNSGNYALLSNIYASAGRWKEGDKVRDTMRKQGVKKTTGL 625
Query: 662 S 662
S
Sbjct: 626 S 626
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 134/476 (28%), Positives = 222/476 (46%), Gaps = 89/476 (18%)
Query: 49 IFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGY--------- 99
+ KSG + + +++N ++ +YAK G I A+ +FD N+MISGY
Sbjct: 110 VLKSGYDRDHYVRNGILGIYAKYGPIEFARKLFDEMPDRTVADWNVMISGYWKCGNEEEA 169
Query: 100 --------------------------IRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQN 133
+ L AR FDK P + VS+ +M+ G+AQ
Sbjct: 170 STLFHVMGDQEISRNVITWTTMITGHAKKGNLKTARMYFDKMPERSVVSWNAMLSGYAQG 229
Query: 134 DCWREALEVFRDMRILG-VIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMID--GF- 189
E + +F DM G V P+E T A+VISS LG C L +++ + D GF
Sbjct: 230 GAPEETIRLFNDMLSPGNVQPDETTWATVISSCSSLGD--PC--LSESIVRKLDDKVGFR 285
Query: 190 --VIISTNLLNMYCVCSSLVEARSLFDEM---KERNIVSWNVMLNGFAKAGLVELARELF 244
+ T LL+M+ C +L A +F+++ K R+ V WN M++ +A+ G + A+ LF
Sbjct: 286 PNYFVKTALLDMHAKCGNLEAAHKIFEQLGVYKYRSSVPWNAMISAYARVGDLPSAKHLF 345
Query: 245 ERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLC--DGIAPNDVMIVDLISACGRAMA 302
+++P +D VSW +MI GY Q +A+ ++ M+ D P++V +V + SACG
Sbjct: 346 DKMPQRDTVSWNSMIAGYTQNGESFKAIKLFEEMISSEDSRKPDEVTMVSVFSACGHLGE 405
Query: 303 FGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQF-ELGIKDHIASWNALIA 361
G G SI+ + ++I+ Y+ CG + A L F E+ +D + S+N LI+
Sbjct: 406 LGLGNWAVSILKVNHIQISISVYNSLINMYSRCGSMQDAVLIFQEMATRD-LVSYNTLIS 464
Query: 362 GFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEIT 421
GF +G + M+ ++EL M + G++P+ IT
Sbjct: 465 GFAEHG---------HGME----------------------SIELLSKMKEDGIEPDRIT 493
Query: 422 MVSVFCAIASSGTLKEGRWAHEYVLNNSITLND-NLSAAIIDMYAKCGSINTAFEV 476
+++ A + +G L EG+ L SI D + A +IDM + G + A ++
Sbjct: 494 YIAILTACSHAGLLDEGQ-----RLFESIKFPDVDHYACMIDMLGRAGRLEEAMKL 544
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 93/320 (29%), Positives = 151/320 (47%), Gaps = 49/320 (15%)
Query: 51 KSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTL---DPVACNIMISGYIRNDRLND 107
K G N F++ +L++++AKCG + A +F+ V N MIS Y R L
Sbjct: 281 KVGFRPNYFVKTALLDMHAKCGNLEAAHKIFEQLGVYKYRSSVPWNAMISAYARVGDLPS 340
Query: 108 AREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDM--RILGVIPNEVTLASVISSS 165
A+ +FDK P + VS+ SMI G+ QN +A+++F +M P+EVT+ SV S+
Sbjct: 341 AKHLFDKMPQRDTVSWNSMIAGYTQNGESFKAIKLFEEMISSEDSRKPDEVTMVSVFSAC 400
Query: 166 VHLG----GIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNI 221
HLG G W +L I++ I + +L+NMY C S+ +A +F EM R++
Sbjct: 401 GHLGELGLGNWAVSILKVNHIQISIS----VYNSLINMYSRCGSMQDAVLIFQEMATRDL 456
Query: 222 VSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCD 281
VS+N +++GFA+ G G +E LS+ M D
Sbjct: 457 VSYNTLISGFAEHG------------------------HGMESIELLSK-------MKED 485
Query: 282 GIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLA 341
GI P+ + + +++AC A EG ++ I D Y A +I GR+ A
Sbjct: 486 GIEPDRITYIAILTACSHAGLLDEGQRLFESIKFPDVDHY----ACMIDMLGRAGRLEEA 541
Query: 342 -RLQFELGIKDHIASWNALI 360
+L + ++ H + +L+
Sbjct: 542 MKLIQSMPMEPHAGIYGSLL 561
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 91/409 (22%), Positives = 162/409 (39%), Gaps = 59/409 (14%)
Query: 242 ELFERIPSKDVVSWGTMIDGYLQVERLSEA-LTMYRAML--CDGIAPNDVMIVDLISACG 298
+F DV + M+ Y Q+ S+ +++++ ML CD I PN ++ + G
Sbjct: 42 HIFHAATHPDVRVFTFMLKYYSQIGVHSQVFVSLFKHMLQHCD-IKPNASFYSVMMKSAG 100
Query: 299 RAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNA 358
E + + ++K+G+D +++ I+ YA
Sbjct: 101 -----SESMLFLAHVLKSGYDRDHYVRNGILGIYA------------------------- 130
Query: 359 LIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPN 418
+ G IE AR+LF+ M R V W+ MISGY + A LFH M D + N
Sbjct: 131 ------KYGPIEFARKLFDEMPDRTVADWNVMISGYWKCGNEEEASTLFHVMGDQEISRN 184
Query: 419 EITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFY 478
IT ++ A G LK R + + S+ + A++ YA+ G+ +F
Sbjct: 185 VITWTTMITGHAKKGNLKTARMYFDKMPERSVVSWN----AMLSGYAQGGAPEETIRLFN 240
Query: 479 HI-------RDRTTSVSPWNAIICGLAMHGDANLTLKIYSDL-EKRNIKLNSITFIGVLS 530
+ D TT W +I + GD L+ I L +K + N +L
Sbjct: 241 DMLSPGNVQPDETT----WATVISSCSSLGDPCLSESIVRKLDDKVGFRPNYFVKTALLD 296
Query: 531 TCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADV 590
G ++ + F+ + VY + + M+ R G L A+ + MP + D
Sbjct: 297 MHAKCGNLEAAHKIFEQL-GVYKYRSSVP-WNAMISAYARVGDLPSAKHLFDKMPQR-DT 353
Query: 591 VIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGR 639
V W +++A +G + + + + S P V + ++++ G
Sbjct: 354 VSWNSMIAGYTQNGESFKAIKLFEEMISSEDSRKPDEVTMVSVFSACGH 402
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/226 (19%), Positives = 92/226 (40%), Gaps = 66/226 (29%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E+ +VS C + G S++ + ++ + + NSLIN+Y++CG
Sbjct: 390 EVTMVSVFSACGHLGELGLGNWAVSILKVNHIQISISVYNSLINMYSRCG---------- 439
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+ DA +F + + VSY ++I GFA++ E++E+
Sbjct: 440 ---------------------SMQDAVLIFQEMATRDLVSYNTLISGFAEHGHGMESIEL 478
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
M+ G+ P+ +T +++++ H G ++D
Sbjct: 479 LSKMKEDGIEPDRITYIAILTACSHAG---------------LLD--------------- 508
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIP 248
E + LF+ +K ++ + M++ +AG +E A +L + +P
Sbjct: 509 -----EGQRLFESIKFPDVDHYACMIDMLGRAGRLEEAMKLIQSMP 549
>gi|125603908|gb|EAZ43233.1| hypothetical protein OsJ_27833 [Oryza sativa Japonica Group]
Length = 567
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 189/515 (36%), Positives = 286/515 (55%), Gaps = 46/515 (8%)
Query: 150 GVIPNEVTLASVISSSVHLGGIWEC-RMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVE 208
G++P+ TL ++ S+ L +H ++ V + LL MY
Sbjct: 89 GLVPDRFTLPPLLGSAGKLPAFPRTGAQVHAQAVRRGFLADVFVVNALLAMYGALRDAAS 148
Query: 209 ARSLFDEMKE-RNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVER 267
R +F ++VSWN ++ G+ K G +E A+ +F+ +P ++ VSW TM+ GY
Sbjct: 149 MREVFGSCAGVADVVSWNTVIGGYVKCGEMESAKRVFDEMPRRNGVSWSTMVGGYAAAGE 208
Query: 268 LSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQAT 327
L A M+ D + A GR + +
Sbjct: 209 LDVAREMF----------------DRMPAIGRNVV---------------------TWNS 231
Query: 328 IIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSW 387
++ +A G + LAR F+ ++ SWNA++ G+ N ++ AR+LF+ M ++DV SW
Sbjct: 232 MVTGFARHGLLPLARKMFDEMPVRNLVSWNAMLRGYSVNSDMDGARELFDVMPEKDVVSW 291
Query: 388 SAMISGYAQNEQPNMALELFHGM-VDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVL 446
+ MISGYAQ + LELF M ++ V+PNE+TMVSV A A+ L+EGRW H ++
Sbjct: 292 TCMISGYAQAGRYQDTLELFRAMQTESNVQPNEVTMVSVLSACANLTALEEGRWVHAFID 351
Query: 447 NNSITLND--NLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDAN 504
+ + LN+ NL AA+IDMYAKCG + A ++F + DR +VS WNA+I LAM+G+A
Sbjct: 352 KHKMVLNNEYNLGAALIDMYAKCGRTDIAVKIFNSL-DRK-NVSAWNALITRLAMNGNAR 409
Query: 505 LTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCM 564
++ + +++ K N ITF+GVL+ C H GLVD G R F+SM S V+P++KHYGCM
Sbjct: 410 DSVDAFEQMKRTGEKPNDITFVGVLTACSHGGLVDEGRRCFQSMASTCGVQPEVKHYGCM 469
Query: 565 VDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHG 624
VD+LGRAG LE+AEE+IRSMPM DV+++G LL A R+H +V ER + L +
Sbjct: 470 VDMLGRAGLLEEAEELIRSMPMAPDVMVFGALLGACRMHKRFDVAERVQSEIHSLNLNAQ 529
Query: 625 PS--RVLLSNIYADAGRWEDAFSIRKEMRDCGMKR 657
S VL+S+IYA AG+W D R+ ++ G+++
Sbjct: 530 QSGCHVLISDIYAAAGKWFDVLEARQVVQRSGIRK 564
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 135/487 (27%), Positives = 225/487 (46%), Gaps = 84/487 (17%)
Query: 42 GQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTL-DPVACNIMISGYI 100
G Q+H+ + G ++ F+ N+L+ +Y + + +F SC+ + D V+ N +I GY+
Sbjct: 114 GAQVHAQAVRRGFLADVFVVNALLAMYGALRDAASMREVFGSCAGVADVVSWNTVIGGYV 173
Query: 101 RNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLAS 160
+ + A+ VFD+ P + VS+++M+ G+A A E+F M +G N VT S
Sbjct: 174 KCGEMESAKRVFDEMPRRNGVSWSTMVGGYAAAGELDVAREMFDRMPAIGR--NVVTWNS 231
Query: 161 VISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERN 220
+++ HGL L AR +FDEM RN
Sbjct: 232 MVTGFAR----------HGL-------------------------LPLARKMFDEMPVRN 256
Query: 221 IVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLC 280
+VSWN ML G++ ++ ARELF+ +P KDVVSW MI GY Q R + L ++RAM
Sbjct: 257 LVSWNAMLRGYSVNSDMDGARELFDVMPEKDVVSWTCMISGYAQAGRYQDTLELFRAMQT 316
Query: 281 DG-IAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGF---DCYDFIQATIIHFYAACG 336
+ + PN+V +V ++SAC A EG +H+ I K + Y+ + A +I YA CG
Sbjct: 317 ESNVQPNEVTMVSVLSACANLTALEEGRWVHAFIDKHKMVLNNEYN-LGAALIDMYAKCG 375
Query: 337 RINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQ 396
R ++A F + ++++WNALI NG D+ F M++
Sbjct: 376 RTDIAVKIFNSLDRKNVSAWNALITRLAMNGNARDSVDAFEQMKR--------------- 420
Query: 397 NEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNN-SITLNDN 455
G KPN+IT V V A + G + EGR + + + +
Sbjct: 421 ----------------TGEKPNDITFVGVLTACSHGGLVDEGRRCFQSMASTCGVQPEVK 464
Query: 456 LSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSP----WNAIICGLAMHGDANLTLKIYS 511
++DM + G + A E+ R+ ++P + A++ MH ++ ++ S
Sbjct: 465 HYGCMVDMLGRAGLLEEAEELI-----RSMPMAPDVMVFGALLGACRMHKRFDVAERVQS 519
Query: 512 DLEKRNI 518
++ N+
Sbjct: 520 EIHSLNL 526
>gi|225457861|ref|XP_002279169.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g77010, mitochondrial-like [Vitis vinifera]
Length = 685
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 190/618 (30%), Positives = 332/618 (53%), Gaps = 7/618 (1%)
Query: 49 IFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDA 108
+F+ + N F N++I Y K G ++ +FDS D + N++ISG+ + L A
Sbjct: 64 LFEEMPKRNCFSWNTMIEGYLKSGSKGKSLELFDSMPHKDAFSWNVVISGFAKEGNLEVA 123
Query: 109 REVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGV---IPNEVTLASVISSS 165
R +F++ P K +++ SMI G+A N +EA+ +F+D+ + + + LA+V+ +
Sbjct: 124 RRLFNEMPWKNGIAWNSMIHGYACNGRPKEAVGLFKDLSLNPLERFCGDTFVLATVVGAC 183
Query: 166 VHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWN 225
+LG + + +H ++ ++ ++ ++L+N+Y C + A + + MKE + S +
Sbjct: 184 TNLGALDCGKQIHARIVVDEVEFDSVLGSSLVNLYGKCGDIDSANHVLNLMKEPDAFSLS 243
Query: 226 VMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAP 285
+++G+A G + AR +F + VV W +MI GY+ EAL ++ M G+
Sbjct: 244 ALISGYASCGRMNDARRIFCLKSNACVVLWNSMISGYVANNEALEALELFNNMRRKGVQE 303
Query: 286 NDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLA-RLQ 344
+ ++SAC +G+Q+H+ + K GF I + ++ Y+ C R + A +L
Sbjct: 304 DYSTFASVLSACSTLGIIDQGIQVHAHVYKVGFTNDIIIDSALVDMYSKCRRPDDACKLF 363
Query: 345 FELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMAL 404
+L D I N++I + G I+DARQ+F+ M + + SW++MI G++QN P AL
Sbjct: 364 SDLQAYDTIL-LNSMITVYSNCGRIDDARQIFDTMPSKSLISWNSMIVGFSQNACPIEAL 422
Query: 405 ELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMY 464
+LF M G++ ++ ++ V A AS +L+ G + + +S +++D Y
Sbjct: 423 DLFCEMNKLGLRMDKFSLAGVISACASISSLELGEQIFARATIIGLEFDQIISTSLVDFY 482
Query: 465 AKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSIT 524
KCG + ++F R + PWN+++ G A +G L ++ + ++ IT
Sbjct: 483 CKCGLVEHGRKLF--DRMMKSDEVPWNSMLMGYATNGHGIEALNVFDQMRSVGVQPTDIT 540
Query: 525 FIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSM 584
F+GVLS C H GLV+ G ++F +MK Y++ P ++HY CMVDL RAG LEDA +I M
Sbjct: 541 FVGVLSACDHCGLVEEGRKWFYAMKLDYHINPGIEHYSCMVDLYARAGLLEDAMNLIEQM 600
Query: 585 PMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAF 644
P+KAD +W ++L HGN +G++ AK + L P + + V LS IYA W +
Sbjct: 601 PLKADTSMWSSVLRGCVAHGNNILGKKVAKRIIDLDPENSGAYVQLSGIYATFEDWGRSA 660
Query: 645 SIRKEMRDCGMKRLPGFS 662
+RK M D + ++PG S
Sbjct: 661 QVRKLMYDKKIPKVPGCS 678
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 142/498 (28%), Positives = 237/498 (47%), Gaps = 36/498 (7%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
L + + C+ A+ G+QIH+ I +E ++ + +SL+NLY KCG I A + +
Sbjct: 174 FVLATVVGACTNLGALDCGKQIHARIVVDEVEFDSVLGSSLVNLYGKCGDIDSANHVLNL 233
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
D + + +ISGY R+NDAR +F C V + SMI G+ N+ EALE+F
Sbjct: 234 MKEPDAFSLSALISGYASCGRMNDARRIFCLKSNACVVLWNSMISGYVANNEALEALELF 293
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
+MR GV + T ASV+S+ LG I + +H V K+ +II + L++MY C
Sbjct: 294 NNMRRKGVQEDYSTFASVLSACSTLGIIDQGIQVHAHVYKVGFTNDIIIDSALVDMYSKC 353
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYL 263
+A LF +++ + + N M+ ++ G ++ AR++F+ +PSK ++SW +MI G+
Sbjct: 354 RRPDDACKLFSDLQAYDTILLNSMITVYSNCGRIDDARQIFDTMPSKSLISWNSMIVGFS 413
Query: 264 QVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDF 323
Q EAL ++ M G+ + + +ISAC + G QI + G +
Sbjct: 414 QNACPIEALDLFCEMNKLGLRMDKFSLAGVISACASISSLELGEQIFARATIIGLEFDQI 473
Query: 324 IQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRD 383
I +++ FY CG + R F+ +K WN+++ G
Sbjct: 474 ISTSLVDFYCKCGLVEHGRKLFDRMMKSDEVPWNSMLMG--------------------- 512
Query: 384 VYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGR-WAH 442
YA N AL +F M GV+P +IT V V A G ++EGR W +
Sbjct: 513 ----------YATNGHGIEALNVFDQMRSVGVQPTDITFVGVLSACDHCGLVEEGRKWFY 562
Query: 443 EYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGD 502
L+ I + ++D+YA+ G + A + + + + S W++++ G HG+
Sbjct: 563 AMKLDYHINPGIEHYSCMVDLYARAGLLEDAMNLIEQMPLKADT-SMWSSVLRGCVAHGN 621
Query: 503 ANLTLKIYS---DLEKRN 517
L K+ DL+ N
Sbjct: 622 NILGKKVAKRIIDLDPEN 639
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 142/532 (26%), Positives = 249/532 (46%), Gaps = 68/532 (12%)
Query: 157 TLASVISSSVHLGGIWECRMLHGLVIKL-MIDGFVIISTNLLNMYCVCSSLVEARSLFDE 215
+LA + S + G I+ R+LH L +K ++ + I LL MY C+S+ EA+ LF+E
Sbjct: 8 SLARQLGSCNNYGSIYRGRLLHILFLKSGVLHSVLSIGNRLLQMYSRCNSMREAQQLFEE 67
Query: 216 MKERNIVSWNVML-------------------------------NGFAKAGLVELARELF 244
M +RN SWN M+ +GFAK G +E+AR LF
Sbjct: 68 MPKRNCFSWNTMIEGYLKSGSKGKSLELFDSMPHKDAFSWNVVISGFAKEGNLEVARRLF 127
Query: 245 ERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGI---APNDVMIVDLISACGRAM 301
+P K+ ++W +MI GY R EA+ +++ + + + + ++ ++ AC
Sbjct: 128 NEMPWKNGIAWNSMIHGYACNGRPKEAVGLFKDLSLNPLERFCGDTFVLATVVGACTNLG 187
Query: 302 AFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIA 361
A G QIH+ IV + + +++++ Y CG I+ A L + S +ALI+
Sbjct: 188 ALDCGKQIHARIVVDEVEFDSVLGSSLVNLYGKCGDIDSANHVLNLMKEPDAFSLSALIS 247
Query: 362 GFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEIT 421
G+ G + DAR++F V W++MISGY N + ALELF+ M GV+ + T
Sbjct: 248 GYASCGRMNDARRIFCLKSNACVVLWNSMISGYVANNEALEALELFNNMRRKGVQEDYST 307
Query: 422 MVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIR 481
SV A ++ G + +G H +V T + + +A++DMY+KC + A ++F ++
Sbjct: 308 FASVLSACSTLGIIDQGIQVHAHVYKVGFTNDIIIDSALVDMYSKCRRPDDACKLFSDLQ 367
Query: 482 DRTT-----------------------------SVSPWNAIICGLAMHGDANLTLKIYSD 512
T S+ WN++I G + + L ++ +
Sbjct: 368 AYDTILLNSMITVYSNCGRIDDARQIFDTMPSKSLISWNSMIVGFSQNACPIEALDLFCE 427
Query: 513 LEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAG 572
+ K ++++ + GV+S C ++LGE+ F + ++ +E D +VD + G
Sbjct: 428 MNKLGLRMDKFSLAGVISACASISSLELGEQIF-ARATIIGLEFDQIISTSLVDFYCKCG 486
Query: 573 QLEDAEEVIRSMPMKADVVIWGTLLA--ASRIHGNVEVGERAAKSLAGLQPS 622
+E ++ M MK+D V W ++L A+ HG + G+QP+
Sbjct: 487 LVEHGRKLFDRM-MKSDEVPWNSMLMGYATNGHGIEALNVFDQMRSVGVQPT 537
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 104/239 (43%), Gaps = 33/239 (13%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
+ +L + C++ ++ G+QI + GLE + I SL++ Y KCGL+ + +FD
Sbjct: 437 KFSLAGVISACASISSLELGEQIFARATIIGLEFDQIISTSLVDFYCKCGLVEHGRKLFD 496
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
D V N M+ GY A N EAL V
Sbjct: 497 RMMKSDEVPWNSMLMGY-------------------------------ATNGHGIEALNV 525
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRM-LHGLVIKLMIDGFVIISTNLLNMYC 201
F MR +GV P ++T V+S+ H G + E R + + + I+ + + ++++Y
Sbjct: 526 FDQMRSVGVQPTDITFVGVLSACDHCGLVEEGRKWFYAMKLDYHINPGIEHYSCMVDLYA 585
Query: 202 VCSSLVEARSLFDEMKERNIVS-WNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMI 259
L +A +L ++M + S W+ +L G G L +++ +RI D + G +
Sbjct: 586 RAGLLEDAMNLIEQMPLKADTSMWSSVLRGCVAHGNNILGKKVAKRIIDLDPENSGAYV 644
>gi|242067301|ref|XP_002448927.1| hypothetical protein SORBIDRAFT_05g001710 [Sorghum bicolor]
gi|241934770|gb|EES07915.1| hypothetical protein SORBIDRAFT_05g001710 [Sorghum bicolor]
Length = 572
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 163/436 (37%), Positives = 257/436 (58%), Gaps = 2/436 (0%)
Query: 227 MLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPN 286
++ +A G V AR++F+ + +DVVSWG M+D Y Q EAL + M G+ +
Sbjct: 111 LVGAYAACGCVGDARKVFDGMAVRDVVSWGVMLDSYCQTRNYKEALLQFAKMKNSGVLSD 170
Query: 287 DVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFE 346
+++ ++SACG G IHS ++ + + + +I+ YA+C + +A +
Sbjct: 171 QLILATVLSACGHIRHLRTGKSIHSYMLVSDILINAHLSSALINLYASCASMEMAEKLYN 230
Query: 347 LGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALEL 406
+ + S A++ G+ RN E AR +F+ M ++DV SWSAMISGYA + QPN AL L
Sbjct: 231 GMPRKDLVSSTAMVFGYARNRKFEIARYIFDGMPEKDVVSWSAMISGYADSNQPNEALSL 290
Query: 407 FHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAK 466
F+ M + G++P+E+TM+SV A A+ G+L + +W H ++ NN + ++ A+IDM+AK
Sbjct: 291 FNDMQECGIRPDEVTMLSVISACANLGSLDKAKWIHAFIKNNGLNKILHICNALIDMFAK 350
Query: 467 CGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFI 526
CG IN A +F + + +V W ++I AMHGD L ++ + ++ N +TF+
Sbjct: 351 CGGINLALNIFNEMPQK--NVITWTSMITAFAMHGDGKSALCLFEQMRNEGVEPNEVTFL 408
Query: 527 GVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPM 586
+L CCHAGLV G F SM Y +EP +HYGCMVDLLGRA +++A +I SM +
Sbjct: 409 NLLYACCHAGLVHEGRSLFSSMVQQYGIEPKHEHYGCMVDLLGRAKLMQEAVNLIESMHL 468
Query: 587 KADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSI 646
+ +V +WG+LLAA +HG++++G AAK + L P+H + VLLS IY + DA +
Sbjct: 469 RPNVPVWGSLLAACWMHGDLKLGAFAAKKILQLDPNHDGASVLLSKIYMKSDNLNDAQEV 528
Query: 647 RKEMRDCGMKRLPGFS 662
R M+ G+ + G S
Sbjct: 529 RDVMKLQGVSKETGLS 544
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 123/463 (26%), Positives = 217/463 (46%), Gaps = 68/463 (14%)
Query: 46 HSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRL 105
H+L F+ G + F++ +L+ YA CG +
Sbjct: 93 HALAFRVGSLDDGFVRTALVGAYAACGCVG------------------------------ 122
Query: 106 NDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSS 165
DAR+VFD ++ VS+ M+ + Q ++EAL F M+ GV+ +++ LA+V+S+
Sbjct: 123 -DARKVFDGMAVRDVVSWGVMLDSYCQTRNYKEALLQFAKMKNSGVLSDQLILATVLSAC 181
Query: 166 VHLGGIWECRMLHG--LVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVS 223
H+ + + +H LV ++I+ +S+ L+N+Y C+S+ A L++ M +++VS
Sbjct: 182 GHIRHLRTGKSIHSYMLVSDILINAH--LSSALINLYASCASMEMAEKLYNGMPRKDLVS 239
Query: 224 WNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGI 283
M+ G+A+ E+AR +F+ +P KDVVSW MI GY + +EAL+++ M GI
Sbjct: 240 STAMVFGYARNRKFEIARYIFDGMPEKDVVSWSAMISGYADSNQPNEALSLFNDMQECGI 299
Query: 284 APNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARL 343
P++V ++ +ISAC + + IH+ I G + I +I +A CG INLA
Sbjct: 300 RPDEVTMLSVISACANLGSLDKAKWIHAFIKNNGLNKILHICNALIDMFAKCGGINLALN 359
Query: 344 QFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMA 403
F + ++ +W ++I F +G D + A
Sbjct: 360 IFNEMPQKNVITWTSMITAFAMHG---DGKS----------------------------A 388
Query: 404 LELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNN-SITLNDNLSAAIID 462
L LF M + GV+PNE+T +++ A +G + EGR ++ I ++D
Sbjct: 389 LCLFEQMRNEGVEPNEVTFLNLLYACCHAGLVHEGRSLFSSMVQQYGIEPKHEHYGCMVD 448
Query: 463 MYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANL 505
+ + + A + + R +V W +++ MHGD L
Sbjct: 449 LLGRAKLMQEAVNLIESMHLR-PNVPVWGSLLAACWMHGDLKL 490
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 90/306 (29%), Positives = 155/306 (50%), Gaps = 34/306 (11%)
Query: 13 QKANLQNSDY---ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYA 69
Q A ++NS +L L + L C + G+ IHS + S + N + ++LINLYA
Sbjct: 158 QFAKMKNSGVLSDQLILATVLSACGHIRHLRTGKSIHSYMLVSDILINAHLSSALINLYA 217
Query: 70 KCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMG 129
C + A+ +++ D V+ M+ GY RN + AR +FD P K VS+++MI G
Sbjct: 218 SCASMEMAEKLYNGMPRKDLVSSTAMVFGYARNRKFEIARYIFDGMPEKDVVSWSAMISG 277
Query: 130 FAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGF 189
+A ++ EAL +F DM+ G+ P+EVT+ SVIS+ +LG + + + +H + ++
Sbjct: 278 YADSNQPNEALSLFNDMQECGIRPDEVTMLSVISACANLGSLDKAKWIHAFIKNNGLNKI 337
Query: 190 VIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPS 249
+ I L++M+ C + A ++F+EM ++N+++W M+ FA G
Sbjct: 338 LHICNALIDMFAKCGGINLALNIFNEMPQKNVITWTSMITAFAMHG-------------- 383
Query: 250 KDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQI 309
DG AL ++ M +G+ PN+V ++L+ AC A EG +
Sbjct: 384 ----------DG-------KSALCLFEQMRNEGVEPNEVTFLNLLYACCHAGLVHEGRSL 426
Query: 310 HSIIVK 315
S +V+
Sbjct: 427 FSSMVQ 432
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 136/292 (46%), Gaps = 31/292 (10%)
Query: 343 LQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNM 402
L F +G D AL+ + G + DAR++F+ M RDV SW M+ Y Q
Sbjct: 95 LAFRVGSLDDGFVRTALVGAYAACGCVGDARKVFDGMAVRDVVSWGVMLDSYCQTRNYKE 154
Query: 403 ALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIID 462
AL F M ++GV +++ + +V A L+ G+ H Y+L + I +N +LS+A+I+
Sbjct: 155 ALLQFAKMKNSGVLSDQLILATVLSACGHIRHLRTGKSIHSYMLVSDILINAHLSSALIN 214
Query: 463 MYAKCGSI---------------------------NTAFEVFYHIRD--RTTSVSPWNAI 493
+YA C S+ N FE+ +I D V W+A+
Sbjct: 215 LYASCASMEMAEKLYNGMPRKDLVSSTAMVFGYARNRKFEIARYIFDGMPEKDVVSWSAM 274
Query: 494 ICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYN 553
I G A N L +++D+++ I+ + +T + V+S C + G +D ++ +
Sbjct: 275 ISGYADSNQPNEALSLFNDMQECGIRPDEVTMLSVISACANLGSLD-KAKWIHAFIKNNG 333
Query: 554 VEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGN 605
+ L ++D+ + G + A + MP K +V+ W +++ A +HG+
Sbjct: 334 LNKILHICNALIDMFAKCGGINLALNIFNEMPQK-NVITWTSMITAFAMHGD 384
>gi|359489786|ref|XP_002271725.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Vitis vinifera]
Length = 852
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 216/662 (32%), Positives = 335/662 (50%), Gaps = 66/662 (9%)
Query: 13 QKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCG 72
Q+ + Y V L+ C + G +H+++F SG E N F+ N L+++Y +CG
Sbjct: 118 QRLGWRPDHYTFPFV--LKACGEIPSFRCGASVHAVVFASGFEWNVFVGNGLVSMYGRCG 175
Query: 73 LISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQ 132
A+ +FD +R + D VS+ S++ + Q
Sbjct: 176 AWENARQVFDE----------------MRERGVGD------------LVSWNSIVAAYMQ 207
Query: 133 NDCWREALEVFRDM-RILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVI 191
A+++F M LG+ P+ V+L +V+ + +G + +HG ++ + V
Sbjct: 208 GGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVF 267
Query: 192 ISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSK- 250
+ +++MY C + EA +F+ MK +++VSWN M+ G+++ G + A LFE+I +
Sbjct: 268 VGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEK 327
Query: 251 ---DVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGL 307
+VV+W +I GY Q EAL ++R M G PN V +V L+S C A G
Sbjct: 328 IELNVVTWSAVIAGYAQRGLGFEALDVFRQMRLCGSEPNVVTLVSLLSGCALAGTLLHGK 387
Query: 308 QIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNG 367
+ H +K +I +NL E D + NALI + +
Sbjct: 388 ETHCHAIK-------WI-------------LNLD----ENDPGDDLMVINALIDMYSKCK 423
Query: 368 MIEDARQLFNNMQKRD--VYSWSAMISGYAQNEQPNMALELFHGMV--DAGVKPNEITMV 423
+ AR +F+ + +D V +W+ +I G AQ+ + N ALELF M+ D V PN T+
Sbjct: 424 SPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTIS 483
Query: 424 SVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSA-AIIDMYAKCGSINTAFEVFYHIRD 482
A A G L+ GR H YVL N A +IDMY+K G ++ A VF ++
Sbjct: 484 CALMACARLGALRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQ 543
Query: 483 RTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGE 542
R VS W +++ G MHG L+I+ +++K + + +TF+ VL C H+G+VD G
Sbjct: 544 RN-GVS-WTSLMTGYGMHGRGEEALQIFYEMQKVGLVPDGVTFVVVLYACSHSGMVDQGI 601
Query: 543 RYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRI 602
YF M + V P +HY CMVDLL RAG+L++A E+IR MPMK +W LL+A R+
Sbjct: 602 NYFNGMNKDFGVVPGAEHYACMVDLLSRAGRLDEAMELIRGMPMKPTPAVWVALLSACRV 661
Query: 603 HGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
+ NVE+GE AA L L+ + S LLSNIYA+A W+D IR M++ G+K+ PG S
Sbjct: 662 YANVELGEYAANQLLELESGNDGSYTLLSNIYANARCWKDVARIRYLMKNTGIKKRPGCS 721
Query: 663 GV 664
V
Sbjct: 722 WV 723
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 96/394 (24%), Positives = 173/394 (43%), Gaps = 49/394 (12%)
Query: 198 NMYCVCSSLVEARSLFDEM-------KERNIVSWNVMLNGFAKAGLVELARELFERIPSK 250
++ C SL A + ++ +I+S + N AKA + + R L S
Sbjct: 34 TLFHQCKSLASAELIHQQLLVQGLPHDPTHIISMYLTFNSPAKA--LSVLRRLHPS--SH 89
Query: 251 DVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIH 310
V W +I + + L + L +YR M G P+ ++ ACG +F G +H
Sbjct: 90 TVFWWNQLIRRSVHLGFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGASVH 149
Query: 311 SIIVKAGFDCYDFIQATIIHFYAACGRINLARLQF----ELGIKDHIASWNALIAGFIRN 366
+++ +GF+ F+ ++ Y CG AR F E G+ D + SWN+++A +++
Sbjct: 150 AVVFASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGD-LVSWNSIVAAYMQG 208
Query: 367 GMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVF 426
G A ++F M + D G++P+ +++V+V
Sbjct: 209 GDSIRAMKMFERMTE------------------------------DLGIRPDAVSLVNVL 238
Query: 427 CAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTS 486
A AS G G+ H Y L + + + + A++DMYAKCG + A +VF R +
Sbjct: 239 PACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFE--RMKVKD 296
Query: 487 VSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFK 546
V WNA++ G + G + L ++ + + I+LN +T+ V++ GL F+
Sbjct: 297 VVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFR 356
Query: 547 SMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEV 580
M+ + EP++ ++ AG L +E
Sbjct: 357 QMR-LCGSEPNVVTLVSLLSGCALAGTLLHGKET 389
>gi|147771783|emb|CAN60259.1| hypothetical protein VITISV_007741 [Vitis vinifera]
Length = 602
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 169/438 (38%), Positives = 263/438 (60%), Gaps = 2/438 (0%)
Query: 227 MLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPN 286
+L + GLV R++F+ + +V W +I Y+ V +AL ++R M G+ P+
Sbjct: 132 LLGFYVACGLVGKGRQVFDEMRQPGLVLWTLIIRAYVCVTFPEKALELFRTMREVGLTPD 191
Query: 287 DVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFE 346
V + ++SACG G +H I K+G + F+ +T+I Y CG ++ A F+
Sbjct: 192 MVAVSTVVSACGLLGDLGVAKAMHCFIEKSGIEVDAFVSSTLISTYGECGSLDYAYRFFQ 251
Query: 347 LGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALEL 406
+I WN +I + + +E +QLF +M RDV SW++MI G+A+ Q AL
Sbjct: 252 ETPMKNIVVWNTMIHQSVEHNNLELGKQLFQSMPDRDVVSWNSMIGGFARIGQYQEALTW 311
Query: 407 FHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAK 466
FH M +GV PN +T++S A AS G L G W H YV N + + +L +++IDMY+K
Sbjct: 312 FHEMEFSGVSPNALTLLSTLSACASHGALDTGAWIHAYVDKNDMNRDGSLDSSLIDMYSK 371
Query: 467 CGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFI 526
CG I+ A ++F R + W +I+CGLAMHG L +S +++ ++ + +T +
Sbjct: 372 CGDIDKAVQIFEESTRR--DLFTWTSIVCGLAMHGRGEKALHYFSKMKEAQVQPDDVTMV 429
Query: 527 GVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPM 586
GVLS C HAGL+D G YF+SM+ V+ + P ++HYG MVDLLGR G L++A ++I MPM
Sbjct: 430 GVLSACAHAGLLDQGWWYFQSMEKVFGLVPKVEHYGXMVDLLGRMGCLKEAYDLIMGMPM 489
Query: 587 KADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSI 646
+A+ +IWG L+A R+H NVE+GE AA+ L GL P +RV+LSN+YA+ +W+ + +
Sbjct: 490 EANEIIWGAFLSACRVHNNVELGEVAARRLLGLXPRDPWARVMLSNMYAEEAKWDRSMGL 549
Query: 647 RKEMRDCGMKRLPGFSGV 664
RKE++ G+K+ PG S +
Sbjct: 550 RKEIKKKGLKKSPGCSSI 567
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 114/469 (24%), Positives = 217/469 (46%), Gaps = 66/469 (14%)
Query: 39 VSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISG 98
V +G+++H+ + ++G + F+ +L+ Y CGL+ + + +FD V ++I
Sbjct: 107 VKEGEEVHASVVRTGFACSEFVSGALLGFYVACGLVGKGRQVFDEMRQPGLVLWTLIIRA 166
Query: 99 YIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTL 158
Y+ CV++ +ALE+FR MR +G+ P+ V +
Sbjct: 167 YV-------------------CVTFP------------EKALELFRTMREVGLTPDMVAV 195
Query: 159 ASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKE 218
++V+S+ LG + + +H + K I+ +S+ L++ Y C SL A F E
Sbjct: 196 STVVSACGLLGDLGVAKAMHCFIEKSGIEVDAFVSSTLISTYGECGSLDYAYRFFQETPM 255
Query: 219 RNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAM 278
+NIV WN M++ + +EL ++LF+ +P +DVVSW +MI G+ ++ + EALT + M
Sbjct: 256 KNIVVWNTMIHQSVEHNNLELGKQLFQSMPDRDVVSWNSMIGGFARIGQYQEALTWFHEM 315
Query: 279 LCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRI 338
G++PN + ++ +SAC A G IH+ + K + + +++I Y+ CG I
Sbjct: 316 EFSGVSPNALTLLSTLSACASHGALDTGAWIHAYVDKNDMNRDGSLDSSLIDMYSKCGDI 375
Query: 339 NLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNE 398
+ A FE + + +W +++ G +G E A F+ M+
Sbjct: 376 DKAVQIFEESTRRDLFTWTSIVCGLAMHGRGEKALHYFSKMK------------------ 417
Query: 399 QPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLS- 457
+A V+P+++TMV V A A +G L +G W + + L +
Sbjct: 418 -------------EAQVQPDDVTMVGVLSACAHAGLLDQGWWYFQ-SMEKVFGLVPKVEH 463
Query: 458 -AAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANL 505
++D+ + G + A+++ + + W A + +H + L
Sbjct: 464 YGXMVDLLGRMGCLKEAYDLIMGMPMEANEII-WGAFLSACRVHNNVEL 511
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 87/400 (21%), Positives = 165/400 (41%), Gaps = 71/400 (17%)
Query: 246 RIPSKDVVSWGTMIDGYLQVERLSE--ALTMYRAMLCDGIAPNDVMIVDLISACGRAMAF 303
R+ +V W TMI ++ ++ L Y L G+ PN + L+ A
Sbjct: 48 RLDCANVFVWNTMIRKQVENGLITRDPPLLYYMQGLRAGLRPNGHTFMYLLKALVSGQEV 107
Query: 304 GEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGF 363
EG ++H+ +V+ GF C +F+ ++ FY AC
Sbjct: 108 KEGEEVHASVVRTGFACSEFVSGALLGFYVAC---------------------------- 139
Query: 364 IRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMV 423
G++ RQ+F+ M++ + W+ +I Y P ALELF M + G+ P+ + +
Sbjct: 140 ---GLVGKGRQVFDEMRQPGLVLWTLIIRAYVCVTFPEKALELFRTMREVGLTPDMVAVS 196
Query: 424 SVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAF--------- 474
+V A G L + H ++ + I ++ +S+ +I Y +CGS++ A+
Sbjct: 197 TVVSACGLLGDLGVAKAMHCFIEKSGIEVDAFVSSTLISTYGECGSLDYAYRFFQETPMK 256
Query: 475 ----------------------EVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSD 512
++F + DR V WN++I G A G L + +
Sbjct: 257 NIVVWNTMIHQSVEHNNLELGKQLFQSMPDR--DVVSWNSMIGGFARIGQYQEALTWFHE 314
Query: 513 LEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAG 572
+E + N++T + LS C G +D G + + ++ D ++D+ + G
Sbjct: 315 MEFSGVSPNALTLLSTLSACASHGALDTGA-WIHAYVDKNDMNRDGSLDSSLIDMYSKCG 373
Query: 573 QLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERA 612
++ A ++ + D+ W +++ +HG GE+A
Sbjct: 374 DIDKAVQIFEE-STRRDLFTWTSIVCGLAMHGR---GEKA 409
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 104/237 (43%), Gaps = 49/237 (20%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
L L+S L C++H A+ G IH+ + K+ + + + +SLI++Y+KCG I +A +F+
Sbjct: 325 LTLLSTLSACASHGALDTGAWIHAYVDKNDMNRDGSLDSSLIDMYSKCGDIDKAVQIFEE 384
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
+ R++F ++TS++ G A + +AL F
Sbjct: 385 STR----------------------RDLF---------TWTSIVCGLAMHGRGEKALHYF 413
Query: 144 RDMRILGVIPNEVTLASVISSSVHLG----GIWECRMLH---GLVIKLMIDGFVIISTNL 196
M+ V P++VT+ V+S+ H G G W + + GLV K ++ + + L
Sbjct: 414 SKMKEAQVQPDDVTMVGVLSACAHAGLLDQGWWYFQSMEKVFGLVPK--VEHYGXMVDLL 471
Query: 197 LNMYCVCSSLVEARSLFDEMK-ERNIVSWNVMLNGFAKAGLVEL----ARELFERIP 248
M C L EA L M E N + W L+ VEL AR L P
Sbjct: 472 GRMGC----LKEAYDLIMGMPMEANEIIWGAFLSACRVHNNVELGEVAARRLLGLXP 524
>gi|147828480|emb|CAN64316.1| hypothetical protein VITISV_027915 [Vitis vinifera]
Length = 841
Score = 326 bits (836), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 208/635 (32%), Positives = 339/635 (53%), Gaps = 85/635 (13%)
Query: 26 LVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCS 85
L+S L S ++V Q +Q+H+LI GL + L + A+ LJS +
Sbjct: 2 LISKLSTIS--LSVKQAKQVHALILIHGL-------SHLEPILARQILJSASNY------ 46
Query: 86 TLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRD 145
+ ++ Y+ + L+ ++ D C + +++ Q+ ++EA ++
Sbjct: 47 -------SATVAQYVHS-VLHHSKSP-DSFSWACAIRFST------QHGQFKEAFALYVQ 91
Query: 146 MRILGVIPNEVTLASVISS----SVHLGGIWECRMLHGLVIKLMIDGF---VIISTNLLN 198
M+ G+ P L+S + + + +GG+ +HG V K G + + T L++
Sbjct: 92 MQRWGLWPTTFALSSALKACARIAYRMGGL----SIHGQVQKFGFSGGGDGIYVETALVD 147
Query: 199 MYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTM 258
YC + AR +FDEM ERN+VSWN ML G+ K+G + +A+ +F+ IP KDV+SW +M
Sbjct: 148 FYCKLGDMEIARKMFDEMAERNVVSWNSMLAGYLKSGDLVVAQRVFDEIPQKDVISWNSM 207
Query: 259 IDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGF 318
I GY + + +AL++++ M A + MI
Sbjct: 208 ISGYARAGDMEKALSLFQQMPERNFASWNAMISG-------------------------- 241
Query: 319 DCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNN 378
Y G I+ AR F+ + + SW +I+G+ + G ++ A +LF+
Sbjct: 242 -------------YVEFGDIDSARSFFDAMPQXNNVSWMTMISGYSKCGDVDSACELFDQ 288
Query: 379 MQKRDVYSWSAMISGYAQNEQPNMALELFHGMV--DAGVKPNEITMVSVFCAIASSGTLK 436
+ +D+ ++AMI+ YAQN +P AL+LF+ M+ D V+P+E+T+ SV A + G L+
Sbjct: 289 VGGKDLLLFNAMIACYAQNSRPKEALKLFNNMLNPDVNVQPDEMTLASVISACSQLGDLR 348
Query: 437 EGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICG 496
G W Y+ I ++ +L+ A++D+YAKCGSI+ A+E+F+ +R + + + A+I G
Sbjct: 349 FGPWIESYMRRLGIEMDGHLATALLDLYAKCGSIDKAYELFHGLRKK--DLVAYTAMILG 406
Query: 497 LAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEP 556
++G A +K++ ++ I N ITFIG+L+ HAGLV+ G R F SMK YN+ P
Sbjct: 407 CGINGKAIDAIKLFDEMVDAQIFPNLITFIGLLTAYNHAGLVEEGYRCFTSMKK-YNLVP 465
Query: 557 DLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSL 616
+ HYG MVDLLGRAG+L++A E+I+SMPM+ +WG LL A R+H NVE GE AA+
Sbjct: 466 SVDHYGIMVDLLGRAGRLQEALELIKSMPMQPHAGVWGALLLACRLHNNVEFGEIAAQHC 525
Query: 617 AGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMR 651
L+P LLSNIYA RW+D +RK +
Sbjct: 526 FELEPDTTGYXSLLSNIYASGERWDDVKRLRKSPK 560
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 128/491 (26%), Positives = 222/491 (45%), Gaps = 84/491 (17%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFK---SGLESNTFIQNSLINLYAKCGLISQAKSM 80
AL SAL+ C+ G IH + K SG +++ +L++ Y K G + A+ M
Sbjct: 102 FALSSALKACARIAYRMGGLSIHGQVQKFGFSGGGDGIYVETALVDFYCKLGDMEIARKM 161
Query: 81 FDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREAL 140
FD + + V+ N M++GY+++ L A+ VFD+ P K +S+ SMI G+A+ +AL
Sbjct: 162 FDEMAERNVVSWNSMLAGYLKSGDLVVAQRVFDEIPQKDVISWNSMISGYARAGDMEKAL 221
Query: 141 EVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMY 200
+F+ M E AS W MI G+V
Sbjct: 222 SLFQQM-------PERNFAS-----------WNA----------MISGYVEF-------- 245
Query: 201 CVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMID 260
+ ARS FD M + N VSW M++G++K G V+ A ELF+++ KD++ + MI
Sbjct: 246 ---GDIDSARSFFDAMPQXNNVSWMTMISGYSKCGDVDSACELFDQVGGKDLLLFNAMIA 302
Query: 261 GYLQVERLSEALTMYRAMLCD--GIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGF 318
Y Q R EAL ++ ML + P+++ + +ISAC + G I S + + G
Sbjct: 303 CYAQNSRPKEALKLFNNMLNPDVNVQPDEMTLASVISACSQLGDLRFGPWIESYMRRLGI 362
Query: 319 DCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNN 378
+ + ++ YA CG I+ A +LF+
Sbjct: 363 EMDGHLATALLDLYAKCGS-------------------------------IDKAYELFHG 391
Query: 379 MQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG 438
++K+D+ +++AMI G N + A++LF MVDA + PN IT + + A +G ++EG
Sbjct: 392 LRKKDLVAYTAMILGCGINGKAIDAIKLFDEMVDAQIFPNLITFIGLLTAYNHAGLVEEG 451
Query: 439 RWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSP----WNAII 494
+ ++ + + ++D+ + G + A E+ ++ + P W A++
Sbjct: 452 YRCFTSMKKYNLVPSVDHYGIMVDLLGRAGRLQEALELI-----KSMPMQPHAGVWGALL 506
Query: 495 CGLAMHGDANL 505
+H +
Sbjct: 507 LACRLHNNVEF 517
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 62/136 (45%), Gaps = 4/136 (2%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E+ L S + CS + G I S + + G+E + + +L++LYAKCG I +A +F
Sbjct: 331 EMTLASVISACSQLGDLRFGPWIESYMRRLGIEMDGHLATALLDLYAKCGSIDKAYELFH 390
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDK----TPIKCCVSYTSMIMGFAQNDCWRE 138
D VA MI G N + DA ++FD+ +++ ++ + E
Sbjct: 391 GLRKKDLVAYTAMILGCGINGKAIDAIKLFDEMVDAQIFPNLITFIGLLTAYNHAGLVEE 450
Query: 139 ALEVFRDMRILGVIPN 154
F M+ ++P+
Sbjct: 451 GYRCFTSMKKYNLVPS 466
>gi|224083626|ref|XP_002307076.1| predicted protein [Populus trichocarpa]
gi|222856525|gb|EEE94072.1| predicted protein [Populus trichocarpa]
Length = 733
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 196/660 (29%), Positives = 337/660 (51%), Gaps = 94/660 (14%)
Query: 33 CSAHIAVSQGQQIHSLIFKSGL-ESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVA 91
C+ + + +G+ IH L+ KSGL N+ + +S + +YAKCG+
Sbjct: 140 CAELLWLEEGKYIHGLVSKSGLFAENSAVGSSFVYMYAKCGV------------------ 181
Query: 92 CNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGV 151
+ DA +FD+ ++ VS+T++++G+ ND + LE +MR +G
Sbjct: 182 -------------MEDASLMFDEIVVRDVVSWTALVIGYVHNDDSEKGLECLCEMRRIGG 228
Query: 152 IPNEV---TLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVE 208
+V TL + +LG + R LHGL +K + ++ ++LL+MY
Sbjct: 229 DGEKVNSRTLEGGFQACGNLGAMIAGRCLHGLAVKTGLGCSQVVQSSLLSMY-------- 280
Query: 209 ARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERL 268
+K G VE A F ++ KDV SW ++I + +
Sbjct: 281 -----------------------SKCGNVEEAHNSFCQVVDKDVFSWTSVIGVCARFGFM 317
Query: 269 SEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATI 328
+E L ++ M D + P+ +++ ++ G +M EG H +IV+ + D + +
Sbjct: 318 NECLNLFWDMQVDDVYPDGIVVSCILLGFGNSMMVREGKAFHGLIVRRNYVLDDTVNNAL 377
Query: 329 IHFYAACGRINLARLQFELGIKDHIASWNALIAGF-----IRNGMIED------------ 371
+ Y G +N A F+ + SWN ++ G+ I+N + ED
Sbjct: 378 LSMYCKFGTLNPAEKLFDGVHEWSKESWNTMVFGYVHCYIIKNSVDEDVSIANSLIDMYG 437
Query: 372 -------ARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVS 424
A ++F Q RDV +W+ +IS Y + A+ LF M+ + PN T+V
Sbjct: 438 KGGNLSIAWKMFCRTQ-RDVVTWNTLISSYTHSGHYAEAITLFDEMISEKLNPNSATLVI 496
Query: 425 VFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRT 484
V A +L++G+ H+Y+ LN +L A++DMYAKCG + + E+F ++++
Sbjct: 497 VLSACCHLPSLEKGKMVHQYIKEGGFELNVSLGTALVDMYAKCGQLEQSRELFNSMKEK- 555
Query: 485 TSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERY 544
V WN +I G +HGDAN ++++ +E+ N+K N+ITF+ +LS C HAG VD G++
Sbjct: 556 -DVISWNVMISGYGLHGDANSAMEVFQQMEQSNVKPNAITFLSLLSACTHAGYVDEGKQL 614
Query: 545 FKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHG 604
F M+ Y+++P+LKH+ CM DLLGR+G L++AE++++SMP+ D +WGTLL+A +IH
Sbjct: 615 FDRMQ-YYSIKPNLKHFACMADLLGRSGNLQEAEDLVQSMPICPDGGVWGTLLSACKIHN 673
Query: 605 NVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
+E+G R AK P + ++LSN+Y G+W++A R+ M++ G+ + G+S V
Sbjct: 674 EIEIGIRVAKCAIESDPENDGYYIMLSNMYGSMGKWDEAERARELMKERGIGKRAGWSAV 733
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 149/622 (23%), Positives = 267/622 (42%), Gaps = 102/622 (16%)
Query: 20 SDYELALVSALRYCSAHI---AVSQGQQI------HSLIFKSGLESNTFIQNSLINLYAK 70
S ++++ S+ Y + HI +Q Q + H+LI +G +N FI + LI+LYA
Sbjct: 17 SPFQISYHSSSNYLNCHIDSFLSNQTQTLQSLHKSHALIITTGNANNVFISSKLISLYA- 75
Query: 71 CGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGF 130
S P + + VFD T K + S+I
Sbjct: 76 --------------SFRKP----------------HSSTYVFDSTNQKDTFLWNSIIKSH 105
Query: 131 AQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKL-MIDGF 189
N + +A + + MR PN+ T+ ++++ L + E + +HGLV K +
Sbjct: 106 FSNGNYFKAFDFYIQMRYDNTPPNQFTIPMIVATCAELLWLEEGKYIHGLVSKSGLFAEN 165
Query: 190 VIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPS 249
+ ++ + MY C + +A +FDE+ R++VSW ++ G+ + +
Sbjct: 166 SAVGSSFVYMYAKCGVMEDASLMFDEIVVRDVVSWTALVIGY---------------VHN 210
Query: 250 KDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQI 309
D E+ E L R + DG N + ACG A G +
Sbjct: 211 DD-------------SEKGLECLCEMRRIGGDGEKVNSRTLEGGFQACGNLGAMIAGRCL 257
Query: 310 HSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMI 369
H + VK G C +Q++++ Y+ CG + A F + + SW ++I R G +
Sbjct: 258 HGLAVKTGLGCSQVVQSSLLSMYSKCGNVEEAHNSFCQVVDKDVFSWTSVIGVCARFGFM 317
Query: 370 EDARQLFNNMQKRDVYSWSAMIS----GYAQNEQPNMALELFHGMV-------DAGVKPN 418
+ LF +MQ DVY ++S G+ N + FHG++ D V
Sbjct: 318 NECLNLFWDMQVDDVYPDGIVVSCILLGFG-NSMMVREGKAFHGLIVRRNYVLDDTVNNA 376
Query: 419 EITMVSVFCAIASSGTLKEG--RWAHE------------YVLNNSITLNDNLSAAIIDMY 464
++M F + + L +G W+ E Y++ NS+ + +++ ++IDMY
Sbjct: 377 LLSMYCKFGTLNPAEKLFDGVHEWSKESWNTMVFGYVHCYIIKNSVDEDVSIANSLIDMY 436
Query: 465 AKCGSINTAFEVFYHI-RDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSI 523
K G+++ A+++F RD T WN +I G + ++ ++ + NS
Sbjct: 437 GKGGNLSIAWKMFCRTQRDVVT----WNTLISSYTHSGHYAEAITLFDEMISEKLNPNSA 492
Query: 524 TFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRS 583
T + VLS CCH ++ G+ + +K E ++ +VD+ + GQLE + E+ S
Sbjct: 493 TLVIVLSACCHLPSLEKGKMVHQYIKEG-GFELNVSLGTALVDMYAKCGQLEQSRELFNS 551
Query: 584 MPMKADVVIWGTLLAASRIHGN 605
M K DV+ W +++ +HG+
Sbjct: 552 MKEK-DVISWNVMISGYGLHGD 572
Score = 155 bits (393), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 121/513 (23%), Positives = 227/513 (44%), Gaps = 96/513 (18%)
Query: 25 ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSC 84
L + C A+ G+ +H L K+GL + +Q+SL+++Y+KCG + +A + F C
Sbjct: 237 TLEGGFQACGNLGAMIAGRCLHGLAVKTGLGCSQVVQSSLLSMYSKCGNVEEAHNSF--C 294
Query: 85 STLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFR 144
+D ++VF S+TS+I A+ E L +F
Sbjct: 295 QVVD--------------------KDVF---------SWTSVIGVCARFGFMNECLNLFW 325
Query: 145 DMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCS 204
DM++ V P+ + ++ ++ + + E + HGL+++ ++ LL+MYC
Sbjct: 326 DMQVDDVYPDGIVVSCILLGFGNSMMVREGKAFHGLIVRRNYVLDDTVNNALLSMYCKFG 385
Query: 205 SLVEARSLFDEMKERNIVSWNVMLNG------------------------FAKAGLVELA 240
+L A LFD + E + SWN M+ G + K G + +A
Sbjct: 386 TLNPAEKLFDGVHEWSKESWNTMVFGYVHCYIIKNSVDEDVSIANSLIDMYGKGGNLSIA 445
Query: 241 RELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRA 300
++F R +DVV+W T+I Y +EA+T++ M+ + + PN +V ++SAC
Sbjct: 446 WKMFCRT-QRDVVTWNTLISSYTHSGHYAEAITLFDEMISEKLNPNSATLVIVLSACCHL 504
Query: 301 MAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALI 360
+ +G +H I + GF+ + ++ YA CG++ +R F + + SWN +I
Sbjct: 505 PSLEKGKMVHQYIKEGGFELNVSLGTALVDMYAKCGQLEQSRELFNSMKEKDVISWNVMI 564
Query: 361 AGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEI 420
+G+ G+ DA N A+E+F M + VKPN I
Sbjct: 565 SGY---GLHGDA----------------------------NSAMEVFQQMEQSNVKPNAI 593
Query: 421 TMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHI 480
T +S+ A +G + EG+ + + SI N A + D+ + G++ A ++
Sbjct: 594 TFLSLLSACTHAGYVDEGKQLFDRMQYYSIKPNLKHFACMADLLGRSGNLQEAEDLV--- 650
Query: 481 RDRTTSVSP----WNAIICGLAMHGDANLTLKI 509
++ + P W ++ +H + + +++
Sbjct: 651 --QSMPICPDGGVWGTLLSACKIHNEIEIGIRV 681
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 107/235 (45%), Gaps = 41/235 (17%)
Query: 25 ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSC 84
LV L C ++ +G+ +H I + G E N + +L+++YAKCG + Q++ +F+S
Sbjct: 493 TLVIVLSACCHLPSLEKGKMVHQYIKEGGFELNVSLGTALVDMYAKCGQLEQSRELFNSM 552
Query: 85 STLDPVACNIMISGYIRNDRLNDAREVF---DKTPIKC-CVSYTSMIMGFAQNDCWREAL 140
D ++ N+MISGY + N A EVF +++ +K +++ S++ E
Sbjct: 553 KEKDVISWNVMISGYGLHGDANSAMEVFQQMEQSNVKPNAITFLSLLSACTHAGYVDEGK 612
Query: 141 EVFRDMRILGVIPNE---VTLASVISSSVHL---------------GGIW-----ECRML 177
++F M+ + PN +A ++ S +L GG+W C++
Sbjct: 613 QLFDRMQYYSIKPNLKHFACMADLLGRSGNLQEAEDLVQSMPICPDGGVWGTLLSACKIH 672
Query: 178 HGLVIKLMI-----------DGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNI 221
+ + I + + DG+ I+ L NMY EA + MKER I
Sbjct: 673 NEIEIGIRVAKCAIESDPENDGYYIM---LSNMYGSMGKWDEAERARELMKERGI 724
>gi|326532272|dbj|BAK05065.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 889
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 199/635 (31%), Positives = 326/635 (51%), Gaps = 34/635 (5%)
Query: 29 ALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLD 88
A++ C A Q+ L+ K G + + + +++++ +CG + A F
Sbjct: 168 AMKSCGALGWHEVALQLLGLLTKFGFQGDPDVATGIVDMFVRCGAVDFASKQFSQIERPT 227
Query: 89 PVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRI 148
N M++GY ++ ++ A E+F+ P + VS+ M+ +Q+ REAL V DM
Sbjct: 228 VFCRNSMLAGYAKSYGVDHALELFESMPERDVVSWNMMVSALSQSGRAREALSVAVDMHN 287
Query: 149 LGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVE 208
GV + T S +++ L + + LH VI+ S ++ Y V S++VE
Sbjct: 288 RGVRLDSTTYTSSLTACAKLSSLGWGKQLHAQVIR---------SLPCIDPY-VASAMVE 337
Query: 209 ARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERL 268
+AK G + AR +F + ++ VSW +I G+LQ
Sbjct: 338 L---------------------YAKCGCFKEARRVFSSLRDRNTVSWTVLIGGFLQYGCF 376
Query: 269 SEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATI 328
SE+L ++ M + + + + +IS C M Q+HS+ +K+G I ++
Sbjct: 377 SESLELFNQMRAELMTVDQFALATIISGCSNRMDMCLARQLHSLSLKSGHTRAVVISNSL 436
Query: 329 IHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWS 388
I YA CG + A F + I SW ++ + + G I AR+ F+ M R+V +W+
Sbjct: 437 ISMYAKCGNLQNAESIFSSMEERDIVSWTGMLTAYSQVGNIGKAREFFDGMSTRNVITWN 496
Query: 389 AMISGYAQNEQPNMALELFHGMV-DAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLN 447
AM+ Y Q+ L+++ M+ + V P+ +T V++F A G K G + +
Sbjct: 497 AMLGAYIQHGAEEDGLKMYSAMLTEKDVIPDWVTYVTLFRGCADMGANKLGDQITGHTVK 556
Query: 448 NSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTL 507
+ L+ ++ A+I MY+KCG I+ A ++F + R VS WNA+I G + HG +
Sbjct: 557 VGLILDTSVMNAVITMYSKCGRISEARKIFDFL-SRKDLVS-WNAMITGYSQHGMGKQAI 614
Query: 508 KIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDL 567
+I+ D+ K+ K + I+++ VLS+C H+GLV G+ YF +K +NV P L+H+ CMVDL
Sbjct: 615 EIFDDMLKKGAKPDYISYVAVLSSCSHSGLVQEGKFYFDMLKRDHNVSPGLEHFSCMVDL 674
Query: 568 LGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSR 627
L RAG L +A+ +I MPMK +WG LL+A + HGN E+ E AAK L L
Sbjct: 675 LARAGNLIEAKNLIDEMPMKPTAEVWGALLSACKTHGNNELAELAAKHLFDLDSPDSGGY 734
Query: 628 VLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
+LL+ IYADAG+ D+ +RK MRD G+K+ PG+S
Sbjct: 735 MLLAKIYADAGKSVDSAQVRKLMRDKGIKKNPGYS 769
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 157/590 (26%), Positives = 285/590 (48%), Gaps = 21/590 (3%)
Query: 25 ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSC 84
AL ALR C A A++ + +H + GL S F+QN+L++ Y CG + A+ +
Sbjct: 30 ALADALRSCGARGALAGARALHGRLVSVGLASAVFLQNTLLHAYLSCGALPDARGLLRGD 89
Query: 85 STLDP--VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
T +P + NIM++GY + L+DA E+F + P + S+ +++ G+ Q+ + +A+E
Sbjct: 90 IT-EPNVITHNIMMNGYAKLGSLSDAEELFGRMPRRDVTSWNTLMSGYYQSGRFLDAMES 148
Query: 143 FRDMRILG-VIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYC 201
F MR G +PN T + S LG L GL+ K G ++T +++M+
Sbjct: 149 FVSMRRSGDSLPNAFTFGCAMKSCGALGWHEVALQLLGLLTKFGFQGDPDVATGIVDMFV 208
Query: 202 VCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDG 261
C ++ A F +++ + N ML G+AK+ V+ A ELFE +P +DVVSW M+
Sbjct: 209 RCGAVDFASKQFSQIERPTVFCRNSMLAGYAKSYGVDHALELFESMPERDVVSWNMMVSA 268
Query: 262 YLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCY 321
Q R EAL++ M G+ + ++AC + + G G Q+H+ ++++ C
Sbjct: 269 LSQSGRAREALSVAVDMHNRGVRLDSTTYTSSLTACAKLSSLGWGKQLHAQVIRS-LPCI 327
Query: 322 D-FIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ 380
D ++ + ++ YA CG AR F + SW LI GF++ G ++ +LFN M+
Sbjct: 328 DPYVASAMVELYAKCGCFKEARRVFSSLRDRNTVSWTVLIGGFLQYGCFSESLELFNQMR 387
Query: 381 KR----DVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLK 436
D ++ + +ISG + +A +L + +G + S+ A G L+
Sbjct: 388 AELMTVDQFALATIISGCSNRMDMCLARQLHSLSLKSGHTRAVVISNSLISMYAKCGNLQ 447
Query: 437 EGRWAHEYVLNNSITLNDNLS-AAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIIC 495
+ +S+ D +S ++ Y++ G+I A E F + R +V WNA++
Sbjct: 448 NAE-----SIFSSMEERDIVSWTGMLTAYSQVGNIGKAREFFDGMSTR--NVITWNAMLG 500
Query: 496 GLAMHGDANLTLKIYSD-LEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNV 554
HG LK+YS L ++++ + +T++ + C G LG++ V +
Sbjct: 501 AYIQHGAEEDGLKMYSAMLTEKDVIPDWVTYVTLFRGCADMGANKLGDQITGHTVKV-GL 559
Query: 555 EPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHG 604
D ++ + + G++ +A ++ + K D+V W ++ HG
Sbjct: 560 ILDTSVMNAVITMYSKCGRISEARKIFDFLSRK-DLVSWNAMITGYSQHG 608
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 120/433 (27%), Positives = 226/433 (52%), Gaps = 10/433 (2%)
Query: 178 HGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLF-DEMKERNIVSWNVMLNGFAKAGL 236
HG ++ + + V + LL+ Y C +L +AR L ++ E N+++ N+M+NG+AK G
Sbjct: 51 HGRLVSVGLASAVFLQNTLLHAYLSCGALPDARGLLRGDITEPNVITHNIMMNGYAKLGS 110
Query: 237 VELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIA-PNDVMIVDLIS 295
+ A ELF R+P +DV SW T++ GY Q R +A+ + +M G + PN +
Sbjct: 111 LSDAEELFGRMPRRDVTSWNTLMSGYYQSGRFLDAMESFVSMRRSGDSLPNAFTFGCAMK 170
Query: 296 ACGRAMAFGE-GLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIA 354
+CG A+ + E LQ+ ++ K GF + I+ + CG ++ A QF + +
Sbjct: 171 SCG-ALGWHEVALQLLGLLTKFGFQGDPDVATGIVDMFVRCGAVDFASKQFSQIERPTVF 229
Query: 355 SWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAG 414
N+++AG+ ++ ++ A +LF +M +RDV SW+ M+S +Q+ + AL + M + G
Sbjct: 230 CRNSMLAGYAKSYGVDHALELFESMPERDVVSWNMMVSALSQSGRAREALSVAVDMHNRG 289
Query: 415 VKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAF 474
V+ + T S A A +L G+ H V+ + ++ +++A++++YAKCG A
Sbjct: 290 VRLDSTTYTSSLTACAKLSSLGWGKQLHAQVIRSLPCIDPYVASAMVELYAKCGCFKEAR 349
Query: 475 EVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCH 534
VF +RDR T W +I G +G + +L++++ + + ++ ++S C +
Sbjct: 350 RVFSSLRDRNT--VSWTVLIGGFLQYGCFSESLELFNQMRAELMTVDQFALATIISGCSN 407
Query: 535 AGLVDLGERYFK-SMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIW 593
+ L + S+KS + + + ++ + + G L++AE + SM + D+V W
Sbjct: 408 RMDMCLARQLHSLSLKSGHTRAVVISN--SLISMYAKCGNLQNAESIFSSMEER-DIVSW 464
Query: 594 GTLLAASRIHGNV 606
+L A GN+
Sbjct: 465 TGMLTAYSQVGNI 477
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 105/425 (24%), Positives = 192/425 (45%), Gaps = 56/425 (13%)
Query: 9 VFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLY 68
+FN +A L D + AL + + CS + + +Q+HSL KSG I NSLI++Y
Sbjct: 382 LFNQMRAELMTVD-QFALATIISGCSNRMDMCLARQLHSLSLKSGHTRAVVISNSLISMY 440
Query: 69 AKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIM 128
AKCG + A+S+F S D V+ M++ Y + + ARE FD + +++ +M+
Sbjct: 441 AKCGNLQNAESIFSSMEERDIVSWTGMLTAYSQVGNIGKAREFFDGMSTRNVITWNAMLG 500
Query: 129 GFAQNDCWREALEVFRDMRI-LGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMID 187
+ Q+ + L+++ M VIP+ VT ++ +G + G +K+ +
Sbjct: 501 AYIQHGAEEDGLKMYSAMLTEKDVIPDWVTYVTLFRGCADMGANKLGDQITGHTVKVGL- 559
Query: 188 GFVIISTNLLN----MYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELAREL 243
I+ T+++N MY C + EAR +FD + +++VSWN M+ G+++ G+ + A E+
Sbjct: 560 ---ILDTSVMNAVITMYSKCGRISEARKIFDFLSRKDLVSWNAMITGYSQHGMGKQAIEI 616
Query: 244 FERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAF 303
F+ ML G P+ + V ++S+C +
Sbjct: 617 FDD-------------------------------MLKKGAKPDYISYVAVLSSCSHSGLV 645
Query: 304 GEGLQIHSII-----VKAGFDCYDFIQATIIHFYAACGRINLAR-LQFELGIKDHIASWN 357
EG ++ V G + + + ++ A G + A+ L E+ +K W
Sbjct: 646 QEGKFYFDMLKRDHNVSPGLEHF----SCMVDLLARAGNLIEAKNLIDEMPMKPTAEVWG 701
Query: 358 ALIAGFIRNGMIE----DARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDA 413
AL++ +G E A+ LF ++ D + + YA + + ++ M D
Sbjct: 702 ALLSACKTHGNNELAELAAKHLF-DLDSPDSGGYMLLAKIYADAGKSVDSAQVRKLMRDK 760
Query: 414 GVKPN 418
G+K N
Sbjct: 761 GIKKN 765
>gi|449479821|ref|XP_004155717.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 745
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 196/639 (30%), Positives = 312/639 (48%), Gaps = 117/639 (18%)
Query: 26 LVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCS 85
L S L+ C+ + G+++H K+G S+ F+ N+L+N+Y KCG
Sbjct: 91 LPSLLKACAQASSGDLGRELHGFAQKNGFASDVFVCNALMNMYEKCGC------------ 138
Query: 86 TLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRD 145
L AR VFD+ P + VS+T+M+ + ++ + EAL + R+
Sbjct: 139 -------------------LVSARLVFDQMPERDVVSWTTMLGCYVRSKAFGEALRLVRE 179
Query: 146 MRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGF--VIISTNLLNMYCVC 203
M+ +GV + V L S+I+ +L + R +HG +++ + D V ++T L++MYC
Sbjct: 180 MQFVGVKLSGVALISLIAVFGNLLDMKSGRAVHGYIVRNVGDEKMEVSMTTALIDMYC-- 237
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYL 263
K G + A+ LF+R+ + VVSW MI G +
Sbjct: 238 -----------------------------KGGCLASAQRLFDRLSKRSVVSWTVMIAGCI 268
Query: 264 QVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDF 323
+ RL E + ML + + PN++ ++ LI+ CG G H+ +++ GF
Sbjct: 269 RSCRLDEGAKNFNRMLEEKLFPNEITLLSLITECGFVGTLDLGKWFHAYLLRNGFGMSLA 328
Query: 324 IQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRD 383
+ +I Y CG++ AR LFN ++K+D
Sbjct: 329 LVTALIDMYGKCGQVGYAR-------------------------------ALFNGVKKKD 357
Query: 384 VYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHE 443
V WS +IS YA + LF M++ VKPN +TMVS+ A +G L G+W H
Sbjct: 358 VKIWSVLISAYAHVSCMDQVFNLFVEMLNNDVKPNNVTMVSLLSLCAEAGALDLGKWTHA 417
Query: 444 YVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDA 503
Y+ + + ++ L A+I+MYAKCG + A +F R + WN ++ G +MHG
Sbjct: 418 YINRHGLEVDVILETALINMYAKCGDVTIARSLFNEAMQR--DIRMWNTMMAGFSMHGCG 475
Query: 504 NLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGC 563
L+++S++E ++ N ITF+ + C H+GL ++HYGC
Sbjct: 476 KEALELFSEMESHGVEPNDITFVSIFHACSHSGL--------------------MEHYGC 515
Query: 564 MVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSH 623
+VDLLGRAG L++A +I +MPM+ + +IWG LLAA ++H N+ +GE AA+ + L P +
Sbjct: 516 LVDLLGRAGHLDEAHNIIENMPMRPNTIIWGALLAACKLHKNLALGEVAARKILELDPQN 575
Query: 624 GPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
VL SNIYA A RW D S+R+ M GMK+ PG S
Sbjct: 576 CGYSVLKSNIYASAKRWNDVTSVREAMSHSGMKKEPGLS 614
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 105/484 (21%), Positives = 204/484 (42%), Gaps = 115/484 (23%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKS-GLES-NTFIQNSLINLYAKCGLISQAKSMF 81
+AL+S + + + G+ +H I ++ G E + +LI++Y K G ++ A+ +F
Sbjct: 190 VALISLIAVFGNLLDMKSGRAVHGYIVRNVGDEKMEVSMTTALIDMYCKGGCLASAQRLF 249
Query: 82 DSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALE 141
D S V+ +MI+G IR+ RL++ + F++
Sbjct: 250 DRLSKRSVVSWTVMIAGCIRSCRLDEGAKNFNR--------------------------- 282
Query: 142 VFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYC 201
M + PNE+TL S+I+ +G + + H +++ + + T L++MY
Sbjct: 283 ----MLEEKLFPNEITLLSLITECGFVGTLDLGKWFHAYLLRNGFGMSLALVTALIDMYG 338
Query: 202 VCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDG 261
C + AR+LF+ +K++++ W+V +I
Sbjct: 339 KCGQVGYARALFNGVKKKDVKIWSV-------------------------------LISA 367
Query: 262 YLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCY 321
Y V + + ++ ML + + PN+V +V L+S C A A G H+ I + G +
Sbjct: 368 YAHVSCMDQVFNLFVEMLNNDVKPNNVTMVSLLSLCAEAGALDLGKWTHAYINRHGLEVD 427
Query: 322 DFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQK 381
++ +I+ YA CG + +AR F ++ I WN ++AGF +G ++A +LF+ M+
Sbjct: 428 VILETALINMYAKCGDVTIARSLFNEAMQRDIRMWNTMMAGFSMHGCGKEALELFSEMES 487
Query: 382 RDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWA 441
GV+PN+IT VS+F A + SG ++
Sbjct: 488 H-------------------------------GVEPNDITFVSIFHACSHSGLMEH---- 512
Query: 442 HEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHG 501
++D+ + G ++ A + ++ R ++ W A++ +H
Sbjct: 513 ---------------YGCLVDLLGRAGHLDEAHNIIENMPMRPNTI-IWGALLAACKLHK 556
Query: 502 DANL 505
+ L
Sbjct: 557 NLAL 560
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 143/321 (44%), Gaps = 37/321 (11%)
Query: 281 DGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINL 340
D A ++ ++ L+ AC +A + G ++H K GF F+ +++ Y CG +
Sbjct: 82 DAAALDNFILPSLLKACAQASSGDLGRELHGFAQKNGFASDVFVCNALMNMYEKCGCLVS 141
Query: 341 ARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQP 400
ARL +F+ M +RDV SW+ M+ Y +++
Sbjct: 142 ARL-------------------------------VFDQMPERDVVSWTTMLGCYVRSKAF 170
Query: 401 NMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNN--SITLNDNLSA 458
AL L M GVK + + ++S+ + +K GR H Y++ N + +++
Sbjct: 171 GEALRLVREMQFVGVKLSGVALISLIAVFGNLLDMKSGRAVHGYIVRNVGDEKMEVSMTT 230
Query: 459 AIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNI 518
A+IDMY K G + +A +F + R SV W +I G + K ++ + + +
Sbjct: 231 ALIDMYCKGGCLASAQRLFDRLSKR--SVVSWTVMIAGCIRSCRLDEGAKNFNRMLEEKL 288
Query: 519 KLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAE 578
N IT + +++ C G +DLG ++F + L ++D+ G+ GQ+ A
Sbjct: 289 FPNEITLLSLITECGFVGTLDLG-KWFHAYLLRNGFGMSLALVTALIDMYGKCGQVGYAR 347
Query: 579 EVIRSMPMKADVVIWGTLLAA 599
+ + K DV IW L++A
Sbjct: 348 ALFNGVK-KKDVKIWSVLISA 367
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 130/305 (42%), Gaps = 56/305 (18%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E+ L+S + C + G+ H+ + ++G + + +LI++Y KCG + A+++F+
Sbjct: 292 EITLLSLITECGFVGTLDLGKWFHAYLLRNGFGMSLALVTALIDMYGKCGQVGYARALFN 351
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
D +++IS Y A C + +
Sbjct: 352 GVKKKDVKIWSVLISAY-------------------------------AHVSCMDQVFNL 380
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
F +M V PN VT+ S++S G + + H + + ++ VI+ T L+NMY
Sbjct: 381 FVEMLNNDVKPNNVTMVSLLSLCAEAGALDLGKWTHAYINRHGLEVDVILETALINMYAK 440
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVS-------- 254
C + ARSLF+E +R+I WN M+ GF+ G + A ELF + S V
Sbjct: 441 CGDVTIARSLFNEAMQRDIRMWNTMMAGFSMHGCGKEALELFSEMESHGVEPNDITFVSI 500
Query: 255 ------------WGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACG--RA 300
+G ++D + L EA + M + PN ++ L++AC +
Sbjct: 501 FHACSHSGLMEHYGCLVDLLGRAGHLDEAHNIIENM---PMRPNTIIWGALLAACKLHKN 557
Query: 301 MAFGE 305
+A GE
Sbjct: 558 LALGE 562
>gi|225427576|ref|XP_002268530.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Vitis vinifera]
Length = 631
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 181/444 (40%), Positives = 264/444 (59%), Gaps = 18/444 (4%)
Query: 237 VELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCD-GIAPNDVMIVDLIS 295
++ AR++F + + S+ T+I + +AL ++ M+ D + PN +
Sbjct: 61 LDYARKIFRSMHRPNCFSYNTLIRALSESNDPCDALLVFIEMVEDCSVEPNCFTFPSVFK 120
Query: 296 ACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFEL-------- 347
ACGRA EG Q+H + VK G D +F+ + ++ Y +CG + A F
Sbjct: 121 ACGRAERLREGRQVHGLAVKFGLDSDEFVVSNVVRMYLSCGVMEDAHRLFYRRVFVDGCD 180
Query: 348 GIKDH-------IASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQP 400
GI+D + WN +I G++R G +E AR LF+ M +R V SW+ MI+GYAQ+
Sbjct: 181 GIRDKKRRVDGDVVLWNVMIDGYVRIGELEVARNLFDEMPQRSVVSWNVMIAGYAQSGHF 240
Query: 401 NMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAI 460
A+E+F M A V PN +T+VSV A++ G L+ G+W H Y + N+I ++D L +A+
Sbjct: 241 KEAVEVFREMQMAEVPPNYVTLVSVLPAMSRLGALELGKWVHLYAVRNNIGVDDVLGSAL 300
Query: 461 IDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKL 520
IDMYAKCGSI A +VF + R +V W+ II GLAMHG A TL + D+E+ +
Sbjct: 301 IDMYAKCGSIEKALQVFEGLPKR--NVVTWSTIIAGLAMHGRAKDTLDHFEDMERAGVMP 358
Query: 521 NSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEV 580
+ +T+IG+LS C HAGLV+ G +F M V +EP ++HYGCMVDLLGRAG LE++EE+
Sbjct: 359 SDVTYIGLLSACSHAGLVNEGRWFFDHMVRVSGLEPRIEHYGCMVDLLGRAGLLEESEEL 418
Query: 581 IRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRW 640
I +MP+K D VIW LL A ++HGNVE+G+R A+ L L P S V LSNIYA G W
Sbjct: 419 ILNMPIKPDDVIWKALLGACKMHGNVEMGKRVAEHLMELAPHDSGSYVALSNIYASLGNW 478
Query: 641 EDAFSIRKEMRDCGMKRLPGFSGV 664
E +R M++ +++ PG S +
Sbjct: 479 EGVAKVRLMMKEMDVRKDPGCSWI 502
Score = 165 bits (417), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 116/454 (25%), Positives = 209/454 (46%), Gaps = 51/454 (11%)
Query: 79 SMFDSCSTLDPVACNIMISGYIRNDR--LNDAREVFDKTPIKCCVSYTSMIMGFAQNDCW 136
M + DP+A ++ +D L+ AR++F C SY ++I ++++
Sbjct: 33 QMIKTAQIRDPLAAAELLRFSAVSDHRDLDYARKIFRSMHRPNCFSYNTLIRALSESNDP 92
Query: 137 REALEVFRDM-RILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTN 195
+AL VF +M V PN T SV + + E R +HGL +K +D + +N
Sbjct: 93 CDALLVFIEMVEDCSVEPNCFTFPSVFKACGRAERLREGRQVHGLAVKFGLDSDEFVVSN 152
Query: 196 LLNMYCVCSSLVEARSLF---------DEMKER------NIVSWNVMLNGFAKAGLVELA 240
++ MY C + +A LF D ++++ ++V WNVM++G+ + G +E+A
Sbjct: 153 VVRMYLSCGVMEDAHRLFYRRVFVDGCDGIRDKKRRVDGDVVLWNVMIDGYVRIGELEVA 212
Query: 241 RELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRA 300
R LF+ +P + VVSW MI GY Q EA+ ++R M + PN V +V ++ A R
Sbjct: 213 RNLFDEMPQRSVVSWNVMIAGYAQSGHFKEAVEVFREMQMAEVPPNYVTLVSVLPAMSRL 272
Query: 301 MAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALI 360
A G +H V+ D + + +I YA CG I A FE K ++ +W+ +I
Sbjct: 273 GALELGKWVHLYAVRNNIGVDDVLGSALIDMYAKCGSIEKALQVFEGLPKRNVVTWSTII 332
Query: 361 AGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEI 420
AG +G +D F +M++ AGV P+++
Sbjct: 333 AGLAMHGRAKDTLDHFEDMER-------------------------------AGVMPSDV 361
Query: 421 TMVSVFCAIASSGTLKEGRWAHEYVLNNS-ITLNDNLSAAIIDMYAKCGSINTAFEVFYH 479
T + + A + +G + EGRW ++++ S + ++D+ + G + + E+ +
Sbjct: 362 TYIGLLSACSHAGLVNEGRWFFDHMVRVSGLEPRIEHYGCMVDLLGRAGLLEESEELILN 421
Query: 480 IRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDL 513
+ + V W A++ MHG+ + ++ L
Sbjct: 422 MPIKPDDVI-WKALLGACKMHGNVEMGKRVAEHL 454
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 146/294 (49%), Gaps = 46/294 (15%)
Query: 28 SALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMF------ 81
S + C + +G+Q+H L K GL+S+ F+ ++++ +Y CG++ A +F
Sbjct: 117 SVFKACGRAERLREGRQVHGLAVKFGLDSDEFVVSNVVRMYLSCGVMEDAHRLFYRRVFV 176
Query: 82 DSCSTL---------DPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQ 132
D C + D V N+MI GY+R L AR +FD+ P + VS+ MI G+AQ
Sbjct: 177 DGCDGIRDKKRRVDGDVVLWNVMIDGYVRIGELEVARNLFDEMPQRSVVSWNVMIAGYAQ 236
Query: 133 NDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVII 192
+ ++EA+EVFR+M++ V PN VTL SV+ + LG + + +H ++ I ++
Sbjct: 237 SGHFKEAVEVFREMQMAEVPPNYVTLVSVLPAMSRLGALELGKWVHLYAVRNNIGVDDVL 296
Query: 193 STNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDV 252
+ L++MY C S+ +A +F+ + +RN+V+W+ ++ G A G
Sbjct: 297 GSALIDMYAKCGSIEKALQVFEGLPKRNVVTWSTIIAGLAMHG----------------- 339
Query: 253 VSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEG 306
R + L + M G+ P+DV + L+SAC A EG
Sbjct: 340 --------------RAKDTLDHFEDMERAGVMPSDVTYIGLLSACSHAGLVNEG 379
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 75/161 (46%), Gaps = 31/161 (19%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+ LVS L S A+ G+ +H ++ + + + ++LI++YAKCG I +
Sbjct: 260 VTLVSVLPAMSRLGALELGKWVHLYAVRNNIGVDDVLGSALIDMYAKCGSIEK------- 312
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
A +VF+ P + V+++++I G A + ++ L+ F
Sbjct: 313 ------------------------ALQVFEGLPKRNVVTWSTIIAGLAMHGRAKDTLDHF 348
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKL 184
DM GV+P++VT ++S+ H G + E R ++++
Sbjct: 349 EDMERAGVMPSDVTYIGLLSACSHAGLVNEGRWFFDHMVRV 389
>gi|296088765|emb|CBI38215.3| unnamed protein product [Vitis vinifera]
Length = 595
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 180/551 (32%), Positives = 291/551 (52%), Gaps = 75/551 (13%)
Query: 153 PNEVTLASVISSSVHLGGIWECRMLHGLVIKLMI--DGFVIISTNLLNMYCVCSSLVEAR 210
P++++ S + + + G+ + +H +IK M D + IST L + C S ++ R
Sbjct: 35 PHKLSFLSTLQTCKSIKGL---KQIHASIIKTMPSPDAQLTISTRL-SALCAQSLPIDPR 90
Query: 211 ---SLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVER 267
SL +++ N+ +N ++ G A + + D +
Sbjct: 91 YALSLLAQLRTPNLPLYNAIIRGLATS--------------NNDSI-------------- 122
Query: 268 LSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQAT 327
E L +Y+ ML GI P++ I ++ AC + A EG ++H +K G ++ T
Sbjct: 123 --EGLVVYKQMLSKGIVPDNYTIPFVLKACAESRAVREGEEVHGQAIKMGLASDVYVSNT 180
Query: 328 IIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIED---------------- 371
++ YA C I AR F+ + + SW +I G+++ G +
Sbjct: 181 LMRMYAVCDVIRSARKVFDTSPQRDLVSWTTMIQGYVKMGFAREGVGLYIIRNSNVNLDV 240
Query: 372 ------------------ARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDA 413
AR++F M ++V SW++MISG AQ Q +L +F M
Sbjct: 241 FVGNALVDMYLKCGDANFARKVFQEMPVKNVVSWNSMISGLAQKGQFKESLYMFRKMQRL 300
Query: 414 GVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTA 473
GVKP+++T+V+V + A+ G L+ G+W H Y+ N I + + A++DMYAKCGSI+ A
Sbjct: 301 GVKPDDVTLVAVLNSCANLGVLELGKWVHAYLDRNQIRADGFIGNALVDMYAKCGSIDQA 360
Query: 474 FEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCC 533
VF + + V + A+I GLAMHG L ++S++ K I+ + +TF+GVL+ C
Sbjct: 361 CWVFQAMNRK--DVYSYTAMIVGLAMHGQGGKALDLFSEMPKMGIEPDEVTFVGVLTACS 418
Query: 534 HAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIW 593
H GLV+ G +YF+ M ++YN+ P L+HYGCMVDLLGRAG + +AEE IR+MP++ D +
Sbjct: 419 HVGLVEEGRKYFEDMSTIYNLRPQLEHYGCMVDLLGRAGLINEAEEFIRNMPIEPDAFVL 478
Query: 594 GTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDC 653
G LL A +IHG VE+GE K + ++P + VL+SNIY+ A RW DA +RK M++
Sbjct: 479 GALLGACKIHGKVELGESVMKKIEKIEPRKDGAYVLMSNIYSSANRWRDALKLRKTMKER 538
Query: 654 GMKRLPGFSGV 664
+++ PG S +
Sbjct: 539 NLEKTPGCSSI 549
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 117/434 (26%), Positives = 190/434 (43%), Gaps = 78/434 (17%)
Query: 123 YTSMIMGFA-QNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLV 181
Y ++I G A N+ E L V++ M G++P+ T+ V+ + + E +HG
Sbjct: 107 YNAIIRGLATSNNDSIEGLVVYKQMLSKGIVPDNYTIPFVLKACAESRAVREGEEVHGQA 166
Query: 182 IKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVE--- 238
IK+ + V +S L+ MY VC + AR +FD +R++VSW M+ G+ K G
Sbjct: 167 IKMGLASDVYVSNTLMRMYAVCDVIRSARKVFDTSPQRDLVSWTTMIQGYVKMGFAREGV 226
Query: 239 -------------------------------LARELFERIPSKDVVSWGTMIDGYLQVER 267
AR++F+ +P K+VVSW +MI G Q +
Sbjct: 227 GLYIIRNSNVNLDVFVGNALVDMYLKCGDANFARKVFQEMPVKNVVSWNSMISGLAQKGQ 286
Query: 268 LSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQAT 327
E+L M+R M G+ P+DV +V ++++C G +H+ + + FI
Sbjct: 287 FKESLYMFRKMQRLGVKPDDVTLVAVLNSCANLGVLELGKWVHAYLDRNQIRADGFIGNA 346
Query: 328 IIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSW 387
++ YA CG I+ A W +F M ++DVYS+
Sbjct: 347 LVDMYAKCGSIDQ-------------ACW------------------VFQAMNRKDVYSY 375
Query: 388 SAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLN 447
+AMI G A + Q AL+LF M G++P+E+T V V A + G ++EGR E ++
Sbjct: 376 TAMIVGLAMHGQGGKALDLFSEMPKMGIEPDEVTFVGVLTACSHVGLVEEGRKYFED-MS 434
Query: 448 NSITLNDNLS--AAIIDMYAKCGSINTAFEVFYHIRDRTTSVSP----WNAIICGLAMHG 501
L L ++D+ + G IN A E R + P A++ +HG
Sbjct: 435 TIYNLRPQLEHYGCMVDLLGRAGLINEAEEFI-----RNMPIEPDAFVLGALLGACKIHG 489
Query: 502 DANLTLKIYSDLEK 515
L + +EK
Sbjct: 490 KVELGESVMKKIEK 503
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 93/322 (28%), Positives = 150/322 (46%), Gaps = 71/322 (22%)
Query: 21 DYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSM 80
+Y + V L+ C+ AV +G+++H K GL S+ ++ N+L+ +YA C +I A+ +
Sbjct: 140 NYTIPFV--LKACAESRAVREGEEVHGQAIKMGLASDVYVSNTLMRMYAVCDVIRSARKV 197
Query: 81 FDSCSTLDPVACNIMISGY--------------IRNDRLN-------------------- 106
FD+ D V+ MI GY IRN +N
Sbjct: 198 FDTSPQRDLVSWTTMIQGYVKMGFAREGVGLYIIRNSNVNLDVFVGNALVDMYLKCGDAN 257
Query: 107 DAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSV 166
AR+VF + P+K VS+ SMI G AQ ++E+L +FR M+ LGV P++VTL +V++S
Sbjct: 258 FARKVFQEMPVKNVVSWNSMISGLAQKGQFKESLYMFRKMQRLGVKPDDVTLVAVLNSCA 317
Query: 167 HLGGIWECRMLHGLVIKLMI--DGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSW 224
+LG + + +H + + I DGF I L++MY C S+ +A +F M +++ S+
Sbjct: 318 NLGVLELGKWVHAYLDRNQIRADGF--IGNALVDMYAKCGSIDQACWVFQAMNRKDVYSY 375
Query: 225 NVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIA 284
M+ G A G A +LF +P GI
Sbjct: 376 TAMIVGLAMHGQGGKALDLFSEMPKM-------------------------------GIE 404
Query: 285 PNDVMIVDLISACGRAMAFGEG 306
P++V V +++AC EG
Sbjct: 405 PDEVTFVGVLTACSHVGLVEEG 426
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 77/153 (50%), Gaps = 31/153 (20%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
++ LV+ L C+ + G+ +H+ + ++ + ++ FI N+L+++YAKCG I QA +F
Sbjct: 306 DVTLVAVLNSCANLGVLELGKWVHAYLDRNQIRADGFIGNALVDMYAKCGSIDQACWVFQ 365
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+ + D SYT+MI+G A + +AL++
Sbjct: 366 AMNRKD-------------------------------VYSYTAMIVGLAMHGQGGKALDL 394
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECR 175
F +M +G+ P+EVT V+++ H+G + E R
Sbjct: 395 FSEMPKMGIEPDEVTFVGVLTACSHVGLVEEGR 427
>gi|115488220|ref|NP_001066597.1| Os12g0289800 [Oryza sativa Japonica Group]
gi|77554360|gb|ABA97156.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113649104|dbj|BAF29616.1| Os12g0289800 [Oryza sativa Japonica Group]
Length = 756
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 204/654 (31%), Positives = 342/654 (52%), Gaps = 45/654 (6%)
Query: 25 ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSC 84
A+VSAL + H +++ +++ F N N+++ ++ G + A+ +FD+
Sbjct: 47 AMVSALAH---HGRLAEARRL----FDEMPRRNPVSWNTMMVACSQHGRVEDARGLFDAM 99
Query: 85 STLDPVACNIMISGYIRNDRLNDAREVFDKTP-IKCCVSYTSMIMGFAQNDCWREALEVF 143
+ + IM+S Y+R L ARE+ D+ P KC Y +MI G+A+N + +A+ +
Sbjct: 100 PARNEYSWTIMVSCYVRAGELTLARELLDRMPGEKCAACYNTMISGYAKNGRFEDAIALL 159
Query: 144 RDMRILGVIPNEVTLASVI-----SSSVHLGGIWECRMLHGLVIKLMIDGFV-------- 190
++M ++ L +I S SV + L + LM++G+V
Sbjct: 160 QEMPAPDIVSWNSVLGGLIRNEEISRSVQFFDEMPDKDL--VSWNLMLEGYVRAGDLDVA 217
Query: 191 -----------IIS-TNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVE 238
+IS NL+N YC + EAR LFD M ERN+V+WNV+L+G+ + VE
Sbjct: 218 SAFFSRIPSPNVISWVNLVNGYCQAGRMGEARELFDRMPERNVVAWNVLLSGYVQFSQVE 277
Query: 239 LARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACG 298
A LF +P K+ +SW TM+ G+++ +L EA + M D + ++ +
Sbjct: 278 AAYNLFIEMPEKNSISWTTMVSGFVRSGKLQEAKDVLSKMPSDNVGAKTALMHGYL---- 333
Query: 299 RAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNA 358
++ + Q+ IV C++ T+I Y CG ++ A + F+ + SWN
Sbjct: 334 KSNLIDDARQLFDGIVVRDAVCWN----TMISGYVQCGMLDEAMVLFQQMPNKDMISWNT 389
Query: 359 LIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPN 418
+IAG + G I A +F M++R+ SW+++ISG+ QN AL+ F M +
Sbjct: 390 MIAGCAQGGQIRKAASIFRKMKRRNTVSWNSIISGFVQNGLFVEALQHFMLMRRDAKSAD 449
Query: 419 EITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFY 478
T A A+ TL+ GR H ++ + + A+I YAKCG + A +VF
Sbjct: 450 WCTYACCLSASANLATLQIGRQFHSLLVRTGFISDSSPGNALISAYAKCGRMLEARQVFD 509
Query: 479 HIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLV 538
+ + WNA+I G A +G+ + + ++ ++E +++ + IT + VLS C HAGL+
Sbjct: 510 EMV--VQDIVSWNALIDGYASNGNGSEVIAVFREMEANSVRPDEITLVVVLSACSHAGLI 567
Query: 539 DLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLA 598
D G +F SM +Y+++P +HY CMVDLLGRAG+L +A E+++ M ++ + +WG LL
Sbjct: 568 DEGLHFFNSMIKLYSLKPVAEHYTCMVDLLGRAGRLREAFELVQGMQIQPNAGVWGALLG 627
Query: 599 ASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRD 652
A R+H N E+ AA+ L L+P + VLLSNI +AG+W+DA +R M++
Sbjct: 628 ACRVHKNHEIAWLAAEKLFELEPCKASNYVLLSNICVEAGKWDDADKVRVLMKE 681
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 113/424 (26%), Positives = 190/424 (44%), Gaps = 41/424 (9%)
Query: 190 VIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPS 249
V S L L AR LF+EM RN+VS+N M++ A G + AR LF+ +P
Sbjct: 11 VFRSNQELTSLARSGQLAAARRLFEEMPRRNVVSYNAMVSALAHHGRLAEARRLFDEMPR 70
Query: 250 KDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQI 309
++ VSW TM+ Q R+ +A ++ AM A N+ ++S RA GE
Sbjct: 71 RNPVSWNTMMVACSQHGRVEDARGLFDAM----PARNEYSWTIMVSCYVRA---GELTLA 123
Query: 310 HSIIVKAGFD----CYDFIQATIIHFYAACGRIN--LARLQFELGIKDHIASWNALIAGF 363
++ + + CY+ T+I YA GR +A LQ E+ D I SWN+++ G
Sbjct: 124 RELLDRMPGEKCAACYN----TMISGYAKNGRFEDAIALLQ-EMPAPD-IVSWNSVLGGL 177
Query: 364 IRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMV 423
IRN I + Q F+ M +D+ SW+ M+ GY + ++A F + PN I+ V
Sbjct: 178 IRNEEISRSVQFFDEMPDKDLVSWNLMLEGYVRAGDLDVASAFFSRI----PSPNVISWV 233
Query: 424 SVFCAIASSGTLKEGRWAHEYVLN-NSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRD 482
++ +G + E R + + N + N LS Y + + A+ +F + +
Sbjct: 234 NLVNGYCQAGRMGEARELFDRMPERNVVAWNVLLSG-----YVQFSQVEAAYNLFIEMPE 288
Query: 483 RTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGE 542
+ S+S W ++ G G + S + N+ + G L + L+D
Sbjct: 289 K-NSIS-WTTMVSGFVRSGKLQEAKDVLSKMPSDNVGAKTALMHGYLKS----NLIDDAR 342
Query: 543 RYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRI 602
+ F + V D + M+ + G L++A + + MP K D++ W T++A
Sbjct: 343 QLFDGI-----VVRDAVCWNTMISGYVQCGMLDEAMVLFQQMPNK-DMISWNTMIAGCAQ 396
Query: 603 HGNV 606
G +
Sbjct: 397 GGQI 400
>gi|147801369|emb|CAN74731.1| hypothetical protein VITISV_037837 [Vitis vinifera]
Length = 719
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 201/635 (31%), Positives = 321/635 (50%), Gaps = 66/635 (10%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
L+ C A +S G+ +HSL KS + +T+ N I LY+KCG ++ A+ F S +
Sbjct: 15 LKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDISDPNV 74
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
+ N +I+ Y + R A ++FD+ P VSY ++I +A AL +F MR +
Sbjct: 75 FSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMREM 134
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
G+ + TL++VI++ G+ LH + + D +V ++ LL Y L +A
Sbjct: 135 GLDMDXFTLSAVITACCDDVGL--IGQLHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDA 192
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLS 269
+ +F + G+ +D VSW +MI Y Q + S
Sbjct: 193 KRVF-----------------YGMGGI-------------RDEVSWNSMIVAYGQHQEGS 222
Query: 270 EALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATII 329
+AL +++ M+ G+ + + +++A GLQ H ++K GF + + +I
Sbjct: 223 KALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLI 282
Query: 330 HFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSA 389
Y+ CG G + D R++F + + D+ W+
Sbjct: 283 DLYSKCG------------------------------GGMSDCRKVFEEITEPDLVLWNT 312
Query: 390 MISGYAQNEQ-PNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNN 448
M+SGY+QNE+ ALE F M G +PN+ + V V A ++ + +G+ H L +
Sbjct: 313 MVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKS 372
Query: 449 SITLND-NLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTL 507
I N ++ A+I MY+KCG++ A +F + + T N++I G A HG +L
Sbjct: 373 DIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTV--SLNSMIAGYAQHGIEMESL 430
Query: 508 KIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDL 567
++ + +R I SITFI VLS C H G V+ G YF MK +N+EP+ +HY CM+DL
Sbjct: 431 HLFQWMLERQIAPTSITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDL 490
Query: 568 LGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSR 627
LGRAG+L +AE +I MP + W +LL A R HGN+E+ +AA + L+PS+
Sbjct: 491 LGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTHGNIELAVKAANQVLQLEPSNAAPY 550
Query: 628 VLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
V+LSN+YA AGRWE+ ++RK MRD G+K+ PG S
Sbjct: 551 VVLSNMYASAGRWEEVATVRKFMRDRGVKKKPGCS 585
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 148/314 (47%), Gaps = 18/314 (5%)
Query: 293 LISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDH 352
L+ C G +HS+ +K+ + I Y+ CGR+ AR F+ +
Sbjct: 14 LLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDISDPN 73
Query: 353 IASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVD 412
+ S+NA+IA + + A QLF+ + + D+ S++ +IS YA + AL LF GM +
Sbjct: 74 VFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMRE 133
Query: 413 AGVKPNEITMVSVFCAIASS-GTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSIN 471
G+ + T+ +V A G + + H +++ +++ A++ Y K G ++
Sbjct: 134 MGLDMDXFTLSAVITACCDDVGLIGQ---LHSVAVSSGFDSYVSVNNALLTYYGKNGDLD 190
Query: 472 TAFEVFY---HIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGV 528
A VFY IRD + WN++I H + + L ++ ++ +R + ++ T V
Sbjct: 191 DAKRVFYGMGGIRDEVS----WNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASV 246
Query: 529 LST-CCHAGLVDLGERYFKSMKSVYNVEPDLKHYGC-MVDLLGR-AGQLEDAEEVIRSMP 585
L+ C L + + + +K+ ++ H G ++DL + G + D +V +
Sbjct: 247 LTAFTCLEDLSGGLQFHGQLIKTGFHQN---SHVGSGLIDLYSKCGGGMSDCRKVFEEI- 302
Query: 586 MKADVVIWGTLLAA 599
+ D+V+W T+++
Sbjct: 303 TEPDLVLWNTMVSG 316
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 114/268 (42%), Gaps = 39/268 (14%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTF-IQNSLINLYAKCGLISQAKSMF 81
+ + V + CS + SQG+QIHSL KS + SN + N+LI +Y+KCG + A+ +F
Sbjct: 343 DCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLF 402
Query: 82 DSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALE 141
D + + V+ N SMI G+AQ+ E+L
Sbjct: 403 DRMAEHNTVSLN-------------------------------SMIAGYAQHGIEMESLH 431
Query: 142 VFRDMRILGVIPNEVTLASVISSSVHLGGIWE-CRMLHGLVIKLMIDGFVIISTNLLNMY 200
+F+ M + P +T SV+S+ H G + E + + K I+ + ++++
Sbjct: 432 LFQWMLERQIAPTSITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDLL 491
Query: 201 CVCSSLVEARSLFDEMK-ERNIVSWNVMLNGFAKAGLVEL----ARELFERIPSKDVVSW 255
L EA +L M + W +L G +EL A ++ + PS + +
Sbjct: 492 GRAGKLSEAENLIARMPFNPGSIGWASLLGACRTHGNIELAVKAANQVLQLEPS-NAAPY 550
Query: 256 GTMIDGYLQVERLSEALTMYRAMLCDGI 283
+ + Y R E T+ + M G+
Sbjct: 551 VVLSNMYASAGRWEEVATVRKFMRDRGV 578
>gi|224134923|ref|XP_002327523.1| predicted protein [Populus trichocarpa]
gi|222836077|gb|EEE74498.1| predicted protein [Populus trichocarpa]
Length = 635
Score = 325 bits (833), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 170/491 (34%), Positives = 273/491 (55%), Gaps = 29/491 (5%)
Query: 197 LNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGF------AKAGLVELARELFERIPSK 250
L+++ C S+ + + + I+ ++ N + G + AR+LF+ IP
Sbjct: 18 LSLFETCKSMYHLKQIHSRTIKTGIICNPIIQNKILSFCCSREFGDMCYARQLFDTIPEP 77
Query: 251 DVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIH 310
V SW M GY ++ +++Y ML + P+ L R++A G ++H
Sbjct: 78 SVFSWNIMFKGYSRIACPKLGVSLYLEMLERNVKPDCYTYPFLFKGFTRSVALQLGRELH 137
Query: 311 SIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAG-------- 362
+VK G D F +I+ Y+ CG I++AR F++ K + +WNA+I+G
Sbjct: 138 CHVVKYGLDSNVFAHNALINMYSLCGLIDMARGIFDMSCKSDVVTWNAMISGYNRIKKDV 197
Query: 363 ---------FIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDA 413
F+ G ++ AR+ F+ M +RD SW+AMI GY + AL LF M +
Sbjct: 198 ISWTAIVTGFVNTGQVDAARKYFHKMPERDHVSWTAMIDGYLRLNCYKEALMLFREMQTS 257
Query: 414 GVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTA 473
+KP+E TMVSV A A G L+ G W Y+ N + + + A+IDMY KCG++ A
Sbjct: 258 KIKPDEFTMVSVLTACAQLGALELGEWIRTYIDKNKVKNDTFVGNALIDMYFKCGNVEMA 317
Query: 474 FEVFYHI--RDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLST 531
+F + RD+ T W A++ GLA++G L ++S + K ++ + +T++GVLS
Sbjct: 318 LSIFNTLPQRDKFT----WTAMVVGLAINGCGEEALNMFSQMLKASVTPDEVTYVGVLSA 373
Query: 532 CCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVV 591
C H G+VD G+++F SM + + +EP++ HYGCMVDLLG+AG L++A E+I++MPMK + +
Sbjct: 374 CTHTGMVDEGKKFFASMTARHGIEPNIAHYGCMVDLLGKAGHLKEAHEIIKNMPMKPNSI 433
Query: 592 IWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMR 651
+WG LL A RIH + E+ ERA + + L+P++G VL NIYA +W+ +R+ M
Sbjct: 434 VWGALLGACRIHKDAEMAERAIEQILELEPNNGAVYVLQCNIYAACNKWDKLRELRQVMM 493
Query: 652 DCGMKRLPGFS 662
D G+K+ PG S
Sbjct: 494 DRGIKKTPGCS 504
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 122/487 (25%), Positives = 204/487 (41%), Gaps = 91/487 (18%)
Query: 43 QQIHSLIFKSGLESNTFIQNSLINLYA--KCGLISQAKSMFDSCSTLDPVACNIMISGYI 100
+QIHS K+G+ N IQN +++ + G + A+ +FD+ + NIM GY
Sbjct: 31 KQIHSRTIKTGIICNPIIQNKILSFCCSREFGDMCYARQLFDTIPEPSVFSWNIMFKGYS 90
Query: 101 R----NDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEV 156
R ++ E+ ++ C +Y + GF +
Sbjct: 91 RIACPKLGVSLYLEMLERNVKPDCYTYPFLFKGFTR------------------------ 126
Query: 157 TLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEM 216
S ++ LG R LH V+K +D V L+NMY +C + AR +FD
Sbjct: 127 ------SVALQLG-----RELHCHVVKYGLDSNVFAHNALINMYSLCGLIDMARGIFDMS 175
Query: 217 KERNIVSWNVMLN-----------------GFAKAGLVELARELFERIPSKDVVSWGTMI 259
+ ++V+WN M++ GF G V+ AR+ F ++P +D VSW MI
Sbjct: 176 CKSDVVTWNAMISGYNRIKKDVISWTAIVTGFVNTGQVDAARKYFHKMPERDHVSWTAMI 235
Query: 260 DGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFD 319
DGYL++ EAL ++R M I P++ +V +++AC + A G I + I K
Sbjct: 236 DGYLRLNCYKEALMLFREMQTSKIKPDEFTMVSVLTACAQLGALELGEWIRTYIDKNKVK 295
Query: 320 CYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNM 379
F+ +I Y CG + +A F + +W A++ G NG E+
Sbjct: 296 NDTFVGNALIDMYFKCGNVEMALSIFNTLPQRDKFTWTAMVVGLAINGCGEE-------- 347
Query: 380 QKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG- 438
AL +F M+ A V P+E+T V V A +G + EG
Sbjct: 348 -----------------------ALNMFSQMLKASVTPDEVTYVGVLSACTHTGMVDEGK 384
Query: 439 RWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLA 498
++ + I N ++D+ K G + A E+ ++ + S+ W A++
Sbjct: 385 KFFASMTARHGIEPNIAHYGCMVDLLGKAGHLKEAHEIIKNMPMKPNSIV-WGALLGACR 443
Query: 499 MHGDANL 505
+H DA +
Sbjct: 444 IHKDAEM 450
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 105/414 (25%), Positives = 187/414 (45%), Gaps = 81/414 (19%)
Query: 37 IAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMI 96
+A+ G+++H + K GL+SN F N+LIN+Y+ CGLI A+ +FD D V N MI
Sbjct: 128 VALQLGRELHCHVVKYGLDSNVFAHNALINMYSLCGLIDMARGIFDMSCKSDVVTWNAMI 187
Query: 97 SGY--IRND---------------RLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREA 139
SGY I+ D +++ AR+ F K P + VS+T+MI G+ + +C++EA
Sbjct: 188 SGYNRIKKDVISWTAIVTGFVNTGQVDAARKYFHKMPERDHVSWTAMIDGYLRLNCYKEA 247
Query: 140 LEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNM 199
L +FR+M+ + P+E T+ SV+++ LG + + + K + + L++M
Sbjct: 248 LMLFREMQTSKIKPDEFTMVSVLTACAQLGALELGEWIRTYIDKNKVKNDTFVGNALIDM 307
Query: 200 YCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMI 259
Y C ++ A S+F+ + +R+ +W M+ G A G E
Sbjct: 308 YFKCGNVEMALSIFNTLPQRDKFTWTAMVVGLAINGCGE--------------------- 346
Query: 260 DGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFD 319
EAL M+ ML + P++V V ++SAC EG +
Sbjct: 347 ----------EALNMFSQMLKASVTPDEVTYVGVLSACTHTGMVDEGKKF---------- 386
Query: 320 CYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNM 379
F T H GI+ +IA + ++ + G +++A ++ NM
Sbjct: 387 ---FASMTARH-----------------GIEPNIAHYGCMVDLLGKAGHLKEAHEIIKNM 426
Query: 380 Q-KRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASS 432
K + W A++ ++ MA +++ ++PN + + C I ++
Sbjct: 427 PMKPNSIVWGALLGACRIHKDAEMAERAIEQILE--LEPNNGAVYVLQCNIYAA 478
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 102/243 (41%), Gaps = 72/243 (29%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E +VS L C+ A+ G+ I + I K+ ++++TF+ N+LI++Y KCG + A S+F+
Sbjct: 263 EFTMVSVLTACAQLGALELGEWIRTYIDKNKVKNDTFVGNALIDMYFKCGNVEMALSIFN 322
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+ D ++T+M++G A N C EAL +
Sbjct: 323 TLPQRDK-------------------------------FTWTAMVVGLAINGCGEEALNM 351
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
F M V P+EVT V+S+ H G M+D
Sbjct: 352 FSQMLKASVTPDEVTYVGVLSACTHTG---------------MVD--------------- 381
Query: 203 CSSLVEARSLFDEMKER-----NIVSWNVMLNGFAKAGLVELARELFERIPSK-DVVSWG 256
E + F M R NI + M++ KAG ++ A E+ + +P K + + WG
Sbjct: 382 -----EGKKFFASMTARHGIEPNIAHYGCMVDLLGKAGHLKEAHEIIKNMPMKPNSIVWG 436
Query: 257 TMI 259
++
Sbjct: 437 ALL 439
>gi|357133320|ref|XP_003568274.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Brachypodium distachyon]
Length = 919
Score = 325 bits (833), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 202/639 (31%), Positives = 317/639 (49%), Gaps = 95/639 (14%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+ + S L CSA + +G+Q+HS + K+G+ + ++ SL++LY K G I +A +FDS
Sbjct: 245 VTIASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEALQIFDS 304
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
DR N V + M++ + Q D ++ ++F
Sbjct: 305 ------------------GDRTN-------------VVLWNLMLVAYGQIDDLAKSFDIF 333
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
M GV PN+ T ++ + H G I +H L IK + +S L++MY
Sbjct: 334 YRMLAAGVRPNKFTYPCMLRTCTHTGEIGLGEQIHSLTIKNGFQSDMYVSGVLIDMY--- 390
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYL 263
+K G ++ A+ + + I KDVVSW +MI GY+
Sbjct: 391 ----------------------------SKYGWLDKAQRILDMIEEKDVVSWTSMIAGYV 422
Query: 264 QVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDF 323
Q E EAL ++ M GI P+++ + ISAC A +G QIH+ + +G+
Sbjct: 423 QHEFCKEALETFKEMQACGIWPDNIGLASAISACAGIKAVHQGSQIHARVYVSGYSA--- 479
Query: 324 IQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRD 383
++ WN L+ + R G+ ++A F ++ ++
Sbjct: 480 ----------------------------DVSIWNGLVYLYARCGISKEAFSSFEAIEHKE 511
Query: 384 VYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHE 443
+W+ +ISG+AQ+ AL++F M AG K N T VS A A+ +K+G+ H
Sbjct: 512 GITWNGLISGFAQSGLYEEALKVFMKMDQAGAKYNVFTFVSSISASANLADIKQGKQIHA 571
Query: 444 YVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDA 503
V+ T +S A+I +Y KCGSI A F+ + R VS WN II + HG
Sbjct: 572 RVIKTGYTSETEISNALISLYGKCGSIEDAKMDFFEMTKRN-EVS-WNTIITCCSQHGRG 629
Query: 504 NLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGC 563
L ++ ++++ +K + +TF+GVL+ C H GLV+ G YFKSM + + + P HY C
Sbjct: 630 LEALDLFDQMKQQGLKPSDVTFVGVLTACSHVGLVEEGLCYFKSMSNEHGIHPRPDHYAC 689
Query: 564 MVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSH 623
+VD+LGRAGQL+ A+ + MP+ AD ++W TLL+A ++H N+E+GE AAK L L+P
Sbjct: 690 VVDILGRAGQLDRAKRFVEEMPIPADSMVWRTLLSACKVHKNLEIGEFAAKHLLELEPHD 749
Query: 624 GPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
S VLLSN YA G+W IRK M+D G+++ PG S
Sbjct: 750 SASYVLLSNAYAVTGKWASRDQIRKIMKDRGVRKEPGRS 788
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 139/580 (23%), Positives = 252/580 (43%), Gaps = 99/580 (17%)
Query: 26 LVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCS 85
L S L C+ G+ IH ++K G S TF+ N+LI+LY +C A +F
Sbjct: 146 LSSILSACTKTELFQLGRLIHVQVYKQGFFSETFVGNALISLYLRCRSFRLADRVFCDML 205
Query: 86 TLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRD 145
D V N +ISG+ AQ AL +F +
Sbjct: 206 YCDSVTFNTLISGH-------------------------------AQCGHGDRALGIFDE 234
Query: 146 MRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSS 205
M++ G+ P+ VT+AS++++ +G + + + LH ++K + I+ +LL++Y
Sbjct: 235 MQLSGLSPDSVTIASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGSLLDLY----- 289
Query: 206 LVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQV 265
K+G +E A ++F+ +VV W M+ Y Q+
Sbjct: 290 --------------------------VKSGDIEEALQIFDSGDRTNVVLWNLMLVAYGQI 323
Query: 266 ERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQ 325
+ L+++ ++ ML G+ PN ++ C G G QIHS+ +K GF ++
Sbjct: 324 DDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTGEIGLGEQIHSLTIKNGFQSDMYVS 383
Query: 326 ATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVY 385
+I Y+ + G ++ A+++ + ++++DV
Sbjct: 384 GVLIDMYS-------------------------------KYGWLDKAQRILDMIEEKDVV 412
Query: 386 SWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYV 445
SW++MI+GY Q+E ALE F M G+ P+ I + S A A + +G H V
Sbjct: 413 SWTSMIAGYVQHEFCKEALETFKEMQACGIWPDNIGLASAISACAGIKAVHQGSQIHARV 472
Query: 446 LNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANL 505
+ + + ++ ++ +YA+CG AF F I + WN +I G A G
Sbjct: 473 YVSGYSADVSIWNGLVYLYARCGISKEAFSSFEAIEHKEGIT--WNGLISGFAQSGLYEE 530
Query: 506 TLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGER-YFKSMKSVYNVEPDLKHYGCM 564
LK++ +++ K N TF+ +S + + G++ + + +K+ Y E ++ + +
Sbjct: 531 ALKVFMKMDQAGAKYNVFTFVSSISASANLADIKQGKQIHARVIKTGYTSETEISN--AL 588
Query: 565 VDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHG 604
+ L G+ G +EDA+ M K + V W T++ HG
Sbjct: 589 ISLYGKCGSIEDAKMDFFEM-TKRNEVSWNTIITCCSQHG 627
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 102/379 (26%), Positives = 182/379 (48%), Gaps = 35/379 (9%)
Query: 225 NVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIA 284
N++++ +AK G V AR +FE + +D VSW ++ GY Q EA+ +YR M G+
Sbjct: 81 NLLIDLYAKKGFVRRARRVFEELSVRDNVSWVAVLSGYAQNGLGEEAVRLYREMHRSGVV 140
Query: 285 PNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQ 344
P ++ ++SAC + F G IH + K GF F+ +I Y C L
Sbjct: 141 PTPYVLSSILSACTKTELFQLGRLIHVQVYKQGFFSETFVGNALISLYLRCRSFRL---- 196
Query: 345 FELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMAL 404
A ++F +M D +++ +ISG+AQ + AL
Sbjct: 197 ---------------------------ADRVFCDMLYCDSVTFNTLISGHAQCGHGDRAL 229
Query: 405 ELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMY 464
+F M +G+ P+ +T+ S+ A ++ G L++G+ H Y+L ++L+ + +++D+Y
Sbjct: 230 GIFDEMQLSGLSPDSVTIASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGSLLDLY 289
Query: 465 AKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSIT 524
K G I A ++F DR T+V WN ++ D + I+ + ++ N T
Sbjct: 290 VKSGDIEEALQIF-DSGDR-TNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFT 347
Query: 525 FIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSM 584
+ +L TC H G + LGE+ S+ + D+ G ++D+ + G L+ A+ ++ M
Sbjct: 348 YPCMLRTCTHTGEIGLGEQ-IHSLTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQRIL-DM 405
Query: 585 PMKADVVIWGTLLAASRIH 603
+ DVV W +++A H
Sbjct: 406 IEEKDVVSWTSMIAGYVQH 424
>gi|242059059|ref|XP_002458675.1| hypothetical protein SORBIDRAFT_03g037910 [Sorghum bicolor]
gi|241930650|gb|EES03795.1| hypothetical protein SORBIDRAFT_03g037910 [Sorghum bicolor]
Length = 894
Score = 325 bits (833), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 187/578 (32%), Positives = 300/578 (51%), Gaps = 38/578 (6%)
Query: 92 CNIMISGYIRNDRLND-----AREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDM 146
C +S IR+ L A +VF++ + +++ G AQ+D ++A+ ++
Sbjct: 342 CQYAMSKVIRSYALQQSDLVFAHKVFEQIESPTTFLWNTLLRGLAQSDAPKDAIVFYKKA 401
Query: 147 RILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSL 206
+ G+ P+ +T V+ + E +H VIKL + +S +L+++Y C L
Sbjct: 402 QEKGMKPDNMTFPFVLKACAKTYAPKEGEQMHSHVIKLGFLLDIFVSNSLIHLYAACGDL 461
Query: 207 VEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVE 266
V ARS+ F+ + KDVVSW ++I GY Q
Sbjct: 462 VCARSI-------------------------------FDEMLVKDVVSWNSLIGGYSQRN 490
Query: 267 RLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQA 326
R E L ++ M + + + V +V +ISAC + + I + + ++
Sbjct: 491 RFKEVLALFELMQAEEVQADKVTMVKVISACTHLGDWSMADCMVRYIERNHIEVDVYLGN 550
Query: 327 TIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYS 386
T+I +Y G++ A F + + NA+I + + G + A+++F+ + +D+ S
Sbjct: 551 TLIDYYCRIGQLQSAEKVFSQMKDKNTVTLNAMIHAYAKGGNLVSAKKIFDQIPNKDLIS 610
Query: 387 WSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVL 446
WS+MI Y+Q + +LELF M A VKP+ + + SV A A G L G+W H+YV
Sbjct: 611 WSSMICAYSQASHFSDSLELFRQMQRAKVKPDAVVIASVLSACAHLGALDLGKWIHDYVR 670
Query: 447 NNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLT 506
N+I + + ++IDM+AKCG + A +VF + ++ T WN+II GLA +G +
Sbjct: 671 RNNIKTDTIMENSLIDMFAKCGCMQEALQVFTEMEEKDTL--SWNSIILGLANNGFEDEA 728
Query: 507 LKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVD 566
L I+ + + N +TF+GVL C + LV G +F+ MK+V+N+EP +KHYGC+V
Sbjct: 729 LNIFYSMLTEGPRPNEVTFLGVLIACANKRLVQEGLDHFERMKTVHNLEPQMKHYGCVVG 788
Query: 567 LLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPS 626
+L RAGQLE A+ I MP+ D V+W LL A + HGNV V E A K L+ L PS+
Sbjct: 789 ILSRAGQLEKAKNFINEMPLAPDPVVWRILLGACKTHGNVAVAEVATKKLSELDPSNSGD 848
Query: 627 RVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
+LLSNIYA A RW DA ++R+ M D +++ P S V
Sbjct: 849 YMLLSNIYASADRWSDALNVRQWMADTAVRKSPACSVV 886
Score = 241 bits (615), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 120/314 (38%), Positives = 197/314 (62%), Gaps = 1/314 (0%)
Query: 352 HIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMV 411
++ SWN +I GF G IE AR LF+ M R+V SW+ +I GY + A+ LF M+
Sbjct: 5 NVVSWNVVITGFAGWGEIEYARLLFDQMPCRNVVSWTGLIDGYTRACLYAEAVALFRHMM 64
Query: 412 DAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSIN 471
G+ P+EIT+++V AI++ G + G H Y + I + + ++ID+YAK GS+
Sbjct: 65 AGGISPSEITVLAVVPAISNLGGILMGEMLHGYCVKKGIMSDARVGNSLIDLYAKIGSVQ 124
Query: 472 TAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLST 531
+ +VF + DR VS W +II G AMHG + L++++++ + I+ N ITF+ V++
Sbjct: 125 NSLKVFDEMLDRRNLVS-WTSIISGFAMHGLSVEALELFAEMRRAGIRPNRITFLSVINA 183
Query: 532 CCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVV 591
C H GLV+ G +FKSM YN++P++KH+GC++D+LGRAG+L +AE++I +P++ +V+
Sbjct: 184 CSHGGLVEQGLAFFKSMVYEYNIDPEIKHFGCIIDMLGRAGRLCEAEQIIEGLPVEVNVI 243
Query: 592 IWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMR 651
+W LL +G VE+G+RA K ++ L+ G +LSN+ + GR+ DA RK +
Sbjct: 244 VWRILLGCCSKYGEVEMGKRAIKMISDLERESGGDFAVLSNVLNELGRFSDAEQARKLLD 303
Query: 652 DCGMKRLPGFSGVV 665
+ + ++PG + VV
Sbjct: 304 ERKIVKVPGLALVV 317
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 121/439 (27%), Positives = 209/439 (47%), Gaps = 66/439 (15%)
Query: 1 TPLDHFHSVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFI 60
P D +Q+ ++ + V L+ C+ A +G+Q+HS + K G + F+
Sbjct: 390 APKDAIVFYKKAQEKGMKPDNMTFPFV--LKACAKTYAPKEGEQMHSHVIKLGFLLDIFV 447
Query: 61 QNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCC 120
NSLI+LYA CG + C AR +FD+ +K
Sbjct: 448 SNSLIHLYAACG----------------DLVC---------------ARSIFDEMLVKDV 476
Query: 121 VSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGL 180
VS+ S+I G++Q + ++E L +F M+ V ++VT+ VIS+ HLG +
Sbjct: 477 VSWNSLIGGYSQRNRFKEVLALFELMQAEEVQADKVTMVKVISACTHLGDWSMADCMVRY 536
Query: 181 VIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELA 240
+ + I+ V + L++ YC L A +F +MK++N V+ N M++ +AK G + A
Sbjct: 537 IERNHIEVDVYLGNTLIDYYCRIGQLQSAEKVFSQMKDKNTVTLNAMIHAYAKGGNLVSA 596
Query: 241 RELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRA 300
+++F++IP+KD++SW +MI Y Q S++L ++R M + P+ V+I ++SAC
Sbjct: 597 KKIFDQIPNKDLISWSSMICAYSQASHFSDSLELFRQMQRAKVKPDAVVIASVLSACAHL 656
Query: 301 MAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQF-ELGIKDHIASWNAL 359
A G IH + + ++ ++I +A CG + A F E+ KD + SWN++
Sbjct: 657 GALDLGKWIHDYVRRNNIKTDTIMENSLIDMFAKCGCMQEALQVFTEMEEKDTL-SWNSI 715
Query: 360 IAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNE 419
I G NG ++ AL +F+ M+ G +PNE
Sbjct: 716 ILGLANNGFEDE-------------------------------ALNIFYSMLTEGPRPNE 744
Query: 420 ITMVSVFCAIASSGTLKEG 438
+T + V A A+ ++EG
Sbjct: 745 VTFLGVLIACANKRLVQEG 763
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 161/673 (23%), Positives = 295/673 (43%), Gaps = 120/673 (17%)
Query: 20 SDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKS 79
S E+ +++ + S + G+ +H K G+ S+ + NSLI+LYAK G + +
Sbjct: 69 SPSEITVLAVVPAISNLGGILMGEMLHGYCVKKGIMSDARVGNSLIDLYAKIGSVQNSLK 128
Query: 80 MFDS-CSTLDPVACNIMISGYIRNDRLNDAREVFDKT------PIKCCVSYTSMIMGFAQ 132
+FD + V+ +ISG+ + +A E+F + P + +++ S+I +
Sbjct: 129 VFDEMLDRRNLVSWTSIISGFAMHGLSVEALELFAEMRRAGIRPNR--ITFLSVINACSH 186
Query: 133 NDCWREALEVFRDM------------------------------RILGVIPNEVTLASVI 162
+ L F+ M +I+ +P EV +VI
Sbjct: 187 GGLVEQGLAFFKSMVYEYNIDPEIKHFGCIIDMLGRAGRLCEAEQIIEGLPVEV---NVI 243
Query: 163 SSSVHLGGIWECRMLHGLV------IKLMID------GFVIISTNLLNMYCVCSSLVEAR 210
+ LG C +G V IK++ D G + +N+LN S +AR
Sbjct: 244 VWRILLG----CCSKYGEVEMGKRAIKMISDLERESGGDFAVLSNVLNELGRFSDAEQAR 299
Query: 211 SLFDEMKERNIVSWN-------VMLNGFAK-------AGL-------------------- 236
L DE K + VM+ K +GL
Sbjct: 300 KLLDERKIVKVPGLALVVTRSFVMMEAVKKLHAHLVVSGLHNCQYAMSKVIRSYALQQSD 359
Query: 237 VELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISA 296
+ A ++FE+I S W T++ G Q + +A+ Y+ G+ P+++ ++ A
Sbjct: 360 LVFAHKVFEQIESPTTFLWNTLLRGLAQSDAPKDAIVFYKKAQEKGMKPDNMTFPFVLKA 419
Query: 297 CGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQF-ELGIKDHIAS 355
C + A EG Q+HS ++K GF F+ ++IH YAACG + AR F E+ +KD + S
Sbjct: 420 CAKTYAPKEGEQMHSHVIKLGFLLDIFVSNSLIHLYAACGDLVCARSIFDEMLVKD-VVS 478
Query: 356 WNALIAGFIRNGMIEDARQLFNNMQKRDV----YSWSAMISGYAQNEQPNMA------LE 405
WN+LI G+ + ++ LF MQ +V + +IS +MA +E
Sbjct: 479 WNSLIGGYSQRNRFKEVLALFELMQAEEVQADKVTMVKVISACTHLGDWSMADCMVRYIE 538
Query: 406 LFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLN-NSITLNDNLSAAIIDMY 464
H VD + T++ +C I G L+ + + N++TLN A+I Y
Sbjct: 539 RNHIEVDVYLGN---TLIDYYCRI---GQLQSAEKVFSQMKDKNTVTLN-----AMIHAY 587
Query: 465 AKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSIT 524
AK G++ +A ++F I ++ + W+++IC + + +L+++ +++ +K +++
Sbjct: 588 AKGGNLVSAKKIFDQIPNK--DLISWSSMICAYSQASHFSDSLELFRQMQRAKVKPDAVV 645
Query: 525 FIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSM 584
VLS C H G +DLG ++ N++ D ++D+ + G +++A +V M
Sbjct: 646 IASVLSACAHLGALDLG-KWIHDYVRRNNIKTDTIMENSLIDMFAKCGCMQEALQVFTEM 704
Query: 585 PMKADVVIWGTLL 597
K D + W +++
Sbjct: 705 EEK-DTLSWNSII 716
Score = 122 bits (305), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 96/393 (24%), Positives = 178/393 (45%), Gaps = 81/393 (20%)
Query: 216 MKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMY 275
M +N+VSWNV++ GFA G +E AR LF+++P ++VVSW +IDGY + +EA+ ++
Sbjct: 1 MPMKNVVSWNVVITGFAGWGEIEYARLLFDQMPCRNVVSWTGLIDGYTRACLYAEAVALF 60
Query: 276 RAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAAC 335
R M+ GI+P+++ ++ ++ A G +H VK G + ++I YA
Sbjct: 61 RHMMAGGISPSEITVLAVVPAISNLGGILMGEMLHGYCVKKGIMSDARVGNSLIDLYAKI 120
Query: 336 GRI-NLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGY 394
G + N ++ E+ + ++ SW ++I+GF +G+ +
Sbjct: 121 GSVQNSLKVFDEMLDRRNLVSWTSIISGFAMHGLSVE----------------------- 157
Query: 395 AQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG-----RWAHEYVLNNS 449
ALELF M AG++PN IT +SV A + G +++G +EY ++
Sbjct: 158 --------ALELFAEMRRAGIRPNRITFLSVINACSHGGLVEQGLAFFKSMVYEYNIDPE 209
Query: 450 ITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKI 509
I IIDM + G + A ++
Sbjct: 210 I----KHFGCIIDMLGRAGRLCEAEQI--------------------------------- 232
Query: 510 YSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDL-KHYGCMVDLL 568
+E +++N I + +L C G V++G+R ++K + ++E + + + ++L
Sbjct: 233 ---IEGLPVEVNVIVWRILLGCCSKYGEVEMGKR---AIKMISDLERESGGDFAVLSNVL 286
Query: 569 GRAGQLEDAEEVIRSMPMKADVVIWGTLLAASR 601
G+ DAE+ + + + V + G L +R
Sbjct: 287 NELGRFSDAEQARKLLDERKIVKVPGLALVVTR 319
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 124/520 (23%), Positives = 224/520 (43%), Gaps = 51/520 (9%)
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
V+ N++I+G+ + AR +FD+ P + VS+T +I G+ + + EA+ +FR M
Sbjct: 7 VSWNVVITGFAGWGEIEYARLLFDQMPCRNVVSWTGLIDGYTRACLYAEAVALFRHMMAG 66
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
G+ P+E+T+ +V+ + +LGGI MLHG +K I + +L+++Y S+ +
Sbjct: 67 GISPSEITVLAVVPAISNLGGILMGEMLHGYCVKKGIMSDARVGNSLIDLYAKIGSVQNS 126
Query: 210 RSLFDEM-KERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERL 268
+FDEM RN+VSW +++GFA GL A ELF
Sbjct: 127 LKVFDEMLDRRNLVSWTSIISGFAMHGLSVEALELFAE---------------------- 164
Query: 269 SEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQ-IHSIIVKAGFDCYDFIQAT 327
M RA GI PN + + +I+AC +GL S++ + D
Sbjct: 165 -----MRRA----GIRPNRITFLSVINACSHGGLVEQGLAFFKSMVYEYNIDPEIKHFGC 215
Query: 328 IIHFYAACGRINLARLQFE-LGIKDHIASWNALIAGFIRNGMIE---DARQLFNNMQKR- 382
II GR+ A E L ++ ++ W L+ + G +E A ++ +++++
Sbjct: 216 IIDMLGRAGRLCEAEQIIEGLPVEVNVIVWRILLGCCSKYGEVEMGKRAIKMISDLERES 275
Query: 383 --DVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRW 440
D S +++ + A +L V + + F + + L
Sbjct: 276 GGDFAVLSNVLNELGRFSDAEQARKLLDERKIVKVPGLALVVTRSFVMMEAVKKL----- 330
Query: 441 AHEYVLNNSITLNDNLSAAIIDMYA-KCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAM 499
H +++ + + + +I YA + + A +VF I TT + WN ++ GLA
Sbjct: 331 -HAHLVVSGLHNCQYAMSKVIRSYALQQSDLVFAHKVFEQIESPTTFL--WNTLLRGLAQ 387
Query: 500 HGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLK 559
+ Y +++ +K +++TF VL C GE+ + + D+
Sbjct: 388 SDAPKDAIVFYKKAQEKGMKPDNMTFPFVLKACAKTYAPKEGEQMHSHVIKL-GFLLDIF 446
Query: 560 HYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAA 599
++ L G L A + M +K DVV W +L+
Sbjct: 447 VSNSLIHLYAACGDLVCARSIFDEMLVK-DVVSWNSLIGG 485
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 115/266 (43%), Gaps = 48/266 (18%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+ + S L C+ A+ G+ IH + ++ ++++T ++NSLI+++AKCG
Sbjct: 644 VVIASVLSACAHLGALDLGKWIHDYVRRNNIKTDTIMENSLIDMFAKCGC---------- 693
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
+ +A +VF + K +S+ S+I+G A N EAL +F
Sbjct: 694 ---------------------MQEALQVFTEMEEKDTLSWNSIILGLANNGFEDEALNIF 732
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWE-------CRMLHGLVIKLMIDGFVIISTNL 196
M G PNEVT V+ + + + E + +H L ++ G V+
Sbjct: 733 YSMLTEGPRPNEVTFLGVLIACANKRLVQEGLDHFERMKTVHNLEPQMKHYGCVV----- 787
Query: 197 LNMYCVCSSLVEARSLFDEMK-ERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSW 255
+ L +A++ +EM + V W ++L G V +A +++ D +
Sbjct: 788 -GILSRAGQLEKAKNFINEMPLAPDPVVWRILLGACKTHGNVAVAEVATKKLSELDPSNS 846
Query: 256 GTMI---DGYLQVERLSEALTMYRAM 278
G + + Y +R S+AL + + M
Sbjct: 847 GDYMLLSNIYASADRWSDALNVRQWM 872
>gi|224116778|ref|XP_002331875.1| predicted protein [Populus trichocarpa]
gi|222875393|gb|EEF12524.1| predicted protein [Populus trichocarpa]
Length = 675
Score = 325 bits (833), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 189/573 (32%), Positives = 306/573 (53%), Gaps = 47/573 (8%)
Query: 96 ISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNE 155
++ +++N RL+ AR +FDK P YT MI G+ +ND +AL++F M + V
Sbjct: 19 LANHLKNQRLDQARLIFDKIPSPNLHLYTKMIAGYTRNDRLCDALKLFDRMSVRDV---- 74
Query: 156 VTLASVISSSVHLGGIWECRMLHGLVIKL---MIDGFVIISTNLLNMYCVCSSLVEARSL 212
V+ S+I + G + G+ +L M + VI T ++N Y + A+ L
Sbjct: 75 VSWNSMIKGCLDCGNL-------GMATRLFDEMPEKNVISWTTMVNGYLKFGRVELAQRL 127
Query: 213 FDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEAL 272
F +M +++ +WN M++G+ + G VE LFE +P +DV+SW +MI G + EAL
Sbjct: 128 FLDMHVKDVAAWNAMVHGYFENGRVEEGVRLFEEMPVRDVISWTSMIGGLDLNGKSEEAL 187
Query: 273 TMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFY 332
+++ ML G+ P ++SAC A+ F G+Q+H +VK G ++FI ++I FY
Sbjct: 188 FVFKKMLRSGVEPTWSTFACVLSACANAVEFNLGVQVHGHVVKLGCFFHEFISVSLITFY 247
Query: 333 AACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMIS 392
A C +I E A ++FN ++V W+A+++
Sbjct: 248 ANCMKI-------------------------------EHAHKIFNETLTKNVVKWTALLT 276
Query: 393 GYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITL 452
Y N + AL +F M G PN+ T A L +G+ H + +
Sbjct: 277 AYVWNNKHQDALRVFGDMTKMGALPNQSTFSITLKACCGLEALDKGKEIHTMAIKLGLET 336
Query: 453 NDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSD 512
+ + +++ MY +CG++N+A VF +I ++ + WN+II G A HG L ++
Sbjct: 337 DVFVGNSLVVMYTECGNVNSAVAVFRNINEK--DIVSWNSIIVGSAQHGFGLWALIFFNQ 394
Query: 513 LEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAG 572
+ +R + N ITF G+LS C +G++ G +F+ + + +HY CMVD+LGR G
Sbjct: 395 MIRRGVDPNEITFTGLLSACSRSGMLLKGRCFFEYISRYKSNVLRPQHYACMVDILGRCG 454
Query: 573 QLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSN 632
+L++AEE++R MP+KA+ +IW LL+A R+H N+EV ERAAK + L+P+ + VLLSN
Sbjct: 455 KLDEAEELVRYMPVKANSMIWLALLSACRVHSNLEVAERAAKHILDLEPNCSSAYVLLSN 514
Query: 633 IYADAGRWEDAFSIRKEMRDCGMKRLPGFSGVV 665
IYA AGRW D +R +M+ G+ + PG S VV
Sbjct: 515 IYASAGRWADVSRMRVKMKQGGLVKQPGSSWVV 547
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 117/455 (25%), Positives = 190/455 (41%), Gaps = 64/455 (14%)
Query: 49 IFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDA 108
+F E N +++N Y K G + A+ +F D A N M+ GY N R+ +
Sbjct: 96 LFDEMPEKNVISWTTMVNGYLKFGRVELAQRLFLDMHVKDVAAWNAMVHGYFENGRVEEG 155
Query: 109 REVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHL 168
+F++ P++ +S+TSMI G N EAL VF+ M GV P T A V+S+ +
Sbjct: 156 VRLFEEMPVRDVISWTSMIGGLDLNGKSEEALFVFKKMLRSGVEPTWSTFACVLSACANA 215
Query: 169 GGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVML 228
+HG V+KL IS +L+ Y C + A +F+E +N+V W +L
Sbjct: 216 VEFNLGVQVHGHVVKLGCFFHEFISVSLITFYANCMKIEHAHKIFNETLTKNVVKWTALL 275
Query: 229 NGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDV 288
Y+ + +AL ++ M G PN
Sbjct: 276 T-------------------------------AYVWNNKHQDALRVFGDMTKMGALPNQS 304
Query: 289 MIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELG 348
+ AC A +G +IH++ +K G + F+ +++ Y CG +N A F
Sbjct: 305 TFSITLKACCGLEALDKGKEIHTMAIKLGLETDVFVGNSLVVMYTECGNVNSAVAVFRNI 364
Query: 349 IKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFH 408
+ I SWN++I G ++G A FN M +R
Sbjct: 365 NEKDIVSWNSIIVGSAQHGFGLWALIFFNQMIRR-------------------------- 398
Query: 409 GMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLN-NSITLNDNLSAAIIDMYAKC 467
GV PNEIT + A + SG L +GR EY+ S L A ++D+ +C
Sbjct: 399 -----GVDPNEITFTGLLSACSRSGMLLKGRCFFEYISRYKSNVLRPQHYACMVDILGRC 453
Query: 468 GSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGD 502
G ++ A E+ ++ + S+ W A++ +H +
Sbjct: 454 GKLDEAEELVRYMPVKANSM-IWLALLSACRVHSN 487
Score = 145 bits (365), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 107/387 (27%), Positives = 182/387 (47%), Gaps = 20/387 (5%)
Query: 222 VSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCD 281
+S+ L K ++ AR +F++IPS ++ + MI GY + +RL +AL ++ M
Sbjct: 13 LSYTTSLANHLKNQRLDQARLIFDKIPSPNLHLYTKMIAGYTRNDRLCDALKLFDRMSVR 72
Query: 282 GIAPNDVMIVDLISACGRAMA---FGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRI 338
+ + MI + MA F E + + I T+++ Y GR+
Sbjct: 73 DVVSWNSMIKGCLDCGNLGMATRLFDEMPEKNVI-----------SWTTMVNGYLKFGRV 121
Query: 339 NLA-RLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQN 397
LA RL ++ +KD +A+WNA++ G+ NG +E+ +LF M RDV SW++MI G N
Sbjct: 122 ELAQRLFLDMHVKD-VAAWNAMVHGYFENGRVEEGVRLFEEMPVRDVISWTSMIGGLDLN 180
Query: 398 EQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLS 457
+ AL +F M+ +GV+P T V A A++ G H +V+ ++ +S
Sbjct: 181 GKSEEALFVFKKMLRSGVEPTWSTFACVLSACANAVEFNLGVQVHGHVVKLGCFFHEFIS 240
Query: 458 AAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRN 517
++I YA C I A ++F T +V W A++ + L+++ D+ K
Sbjct: 241 VSLITFYANCMKIEHAHKIFNET--LTKNVVKWTALLTAYVWNNKHQDALRVFGDMTKMG 298
Query: 518 IKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDA 577
N TF L CC +D G+ +M +E D+ +V + G + A
Sbjct: 299 ALPNQSTFSITLKACCGLEALDKGKE-IHTMAIKLGLETDVFVGNSLVVMYTECGNVNSA 357
Query: 578 EEVIRSMPMKADVVIWGTLLAASRIHG 604
V R++ K D+V W +++ S HG
Sbjct: 358 VAVFRNINEK-DIVSWNSIIVGSAQHG 383
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 114/271 (42%), Gaps = 62/271 (22%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
L C+ + + G Q+H + K G + FI SLI YA C I A +F+ T +
Sbjct: 209 LSACANAVEFNLGVQVHGHVVKLGCFFHEFISVSLITFYANCMKIEHAHKIFNETLTKNV 268
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
V +++ Y+ N++ D AL VF DM +
Sbjct: 269 VKWTALLTAYVWNNKHQD-------------------------------ALRVFGDMTKM 297
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
G +PN+ T + + + L + + + +H + IKL ++ V + +L+ MY C ++ A
Sbjct: 298 GALPNQSTFSITLKACCGLEALDKGKEIHTMAIKLGLETDVFVGNSLVVMYTECGNVNSA 357
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLS 269
++F + E++IVSWN ++ G A+ G W
Sbjct: 358 VAVFRNINEKDIVSWNSIIVGSAQHGF----------------GLW-------------- 387
Query: 270 EALTMYRAMLCDGIAPNDVMIVDLISACGRA 300
AL + M+ G+ PN++ L+SAC R+
Sbjct: 388 -ALIFFNQMIRRGVDPNEITFTGLLSACSRS 417
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 69/147 (46%), Gaps = 31/147 (21%)
Query: 29 ALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLD 88
L+ C A+ +G++IH++ K GLE++ F+ NSL+ +Y +CG ++ A ++F + + D
Sbjct: 309 TLKACCGLEALDKGKEIHTMAIKLGLETDVFVGNSLVVMYTECGNVNSAVAVFRNINEKD 368
Query: 89 PVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRI 148
VS+ S+I+G AQ+ AL F M
Sbjct: 369 -------------------------------IVSWNSIIVGSAQHGFGLWALIFFNQMIR 397
Query: 149 LGVIPNEVTLASVISSSVHLGGIWECR 175
GV PNE+T ++S+ G + + R
Sbjct: 398 RGVDPNEITFTGLLSACSRSGMLLKGR 424
>gi|357510067|ref|XP_003625322.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355500337|gb|AES81540.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 1024
Score = 325 bits (832), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 163/439 (37%), Positives = 257/439 (58%), Gaps = 3/439 (0%)
Query: 225 NVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIA 284
N +++ +A+ GL++ AR++F+ KDVV+W TMIDGY + EA+ ++ ML +
Sbjct: 296 NGLIHFYAERGLLKNARQVFDESSDKDVVTWTTMIDGYAAHDCSEEAMEVFELMLLSHVE 355
Query: 285 PNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQ 344
PN+V ++ ++SAC G ++H + + C + ++ Y C + AR
Sbjct: 356 PNEVTLIAVVSACSDMGNLEMGKRVHEKVEEKNMRCSLSLHNALLDMYVKCDCLVDAREL 415
Query: 345 FELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMAL 404
F+ + SW +++ G+ + G +E AR+ F+ +++ WSAMI+GY+QN +P +L
Sbjct: 416 FDRMATKDVYSWTSMVNGYAKCGDLESARRFFDQTPRKNAVCWSAMIAGYSQNNKPKESL 475
Query: 405 ELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEY-VLNNSITLNDNLSAAIIDM 463
+LFH M++ GV P E T+VSV A L G W H+Y V+ I L+ L AI+DM
Sbjct: 476 KLFHEMMERGVVPIEHTLVSVLSACGQLTCLNLGDWIHQYFVVGKIIPLSVTLENAIVDM 535
Query: 464 YAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSI 523
YAKCGSI+ A EVF + +R ++ WN +I G A +G A + ++ + + N+I
Sbjct: 536 YAKCGSIDAATEVFSTMPER--NLISWNTMIAGYAANGRAKQAINVFDQMRNMGFEPNNI 593
Query: 524 TFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRS 583
TF+ +L+ C H GL+ G YF +M+ Y ++P+ HY CMVDLLGR G LE+A ++I +
Sbjct: 594 TFVSLLTACSHGGLISEGREYFDNMERKYGIKPERGHYACMVDLLGRTGLLEEAYKLIAN 653
Query: 584 MPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDA 643
MPM+ WG LL A R+HGNVE+ +A +L L P VLL+N A+ +W D
Sbjct: 654 MPMQPCEAAWGALLNACRMHGNVELARLSAHNLLRLDPEDSGIYVLLANTCANDRKWSDV 713
Query: 644 FSIRKEMRDCGMKRLPGFS 662
+R M+D G+K++PG+S
Sbjct: 714 RRVRSLMKDKGVKKIPGYS 732
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 141/486 (29%), Positives = 232/486 (47%), Gaps = 71/486 (14%)
Query: 25 ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSC 84
+ V AL+ C V +G+ ++ +++K G + ++N LI+ YA+ GL
Sbjct: 259 SFVFALKACQQFETVFEGESVYCVVWKMGFDCELLVRNGLIHFYAERGL----------- 307
Query: 85 STLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFR 144
L +AR+VFD++ K V++T+MI G+A +DC EA+EVF
Sbjct: 308 --------------------LKNARQVFDESSDKDVVTWTTMIDGYAAHDCSEEAMEVFE 347
Query: 145 DMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCS 204
M + V PNEVTL +V+S+ +G + + +H V + + + + LL+MY C
Sbjct: 348 LMLLSHVEPNEVTLIAVVSACSDMGNLEMGKRVHEKVEEKNMRCSLSLHNALLDMYVKCD 407
Query: 205 SLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQ 264
LV+AR LFD M +++ SW M+NG+AK G +E AR F++ P K+ V W MI GY Q
Sbjct: 408 CLVDARELFDRMATKDVYSWTSMVNGYAKCGDLESARRFFDQTPRKNAVCWSAMIAGYSQ 467
Query: 265 VERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDF- 323
+ E+L ++ M+ G+ P + +V ++SACG+ G IH V
Sbjct: 468 NNKPKESLKLFHEMMERGVVPIEHTLVSVLSACGQLTCLNLGDWIHQYFVVGKIIPLSVT 527
Query: 324 IQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRD 383
++ I+ YA CG I+ A F + ++ SWN +IAG+ NG + A +F+ M+
Sbjct: 528 LENAIVDMYAKCGSIDAATEVFSTMPERNLISWNTMIAGYAANGRAKQAINVFDQMR--- 584
Query: 384 VYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHE 443
+ G +PN IT VS+ A + G + EGR E
Sbjct: 585 ----------------------------NMGFEPNNITFVSLLTACSHGGLISEGR---E 613
Query: 444 YVLN----NSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAM 499
Y N I A ++D+ + G + A+++ ++ + + W A++ M
Sbjct: 614 YFDNMERKYGIKPERGHYACMVDLLGRTGLLEEAYKLIANMPMQPCEAA-WGALLNACRM 672
Query: 500 HGDANL 505
HG+ L
Sbjct: 673 HGNVEL 678
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 111/456 (24%), Positives = 207/456 (45%), Gaps = 73/456 (16%)
Query: 190 VIISTNLLNMYCVCSSLVEARSLFDEMKERNI------VSWNVMLNGFAKAGLVELAREL 243
VII+ L + CS++ + + + M I VS + A +G + A +
Sbjct: 154 VIITNPTLLIMESCSTMRQLKQIQARMTLTGIITHAFPVSRVIAFCALAHSGDLHYAHTI 213
Query: 244 FERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAF 303
F R+ + W TMI GY + A + + M + + V + AC +
Sbjct: 214 FNRVEQPNTFMWNTMIRGYQNARKPIFAFSFFVYMFQLRVEMDSRSFVFALKACQQFETV 273
Query: 304 GEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGF 363
EG ++ ++ K GFDC ++ +IHFYA
Sbjct: 274 FEGESVYCVVWKMGFDCELLVRNGLIHFYA------------------------------ 303
Query: 364 IRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMV 423
G++++ARQ+F+ +DV +W+ MI GYA ++ A+E+F M+ + V+PNE+T++
Sbjct: 304 -ERGLLKNARQVFDESSDKDVVTWTTMIDGYAAHDCSEEAMEVFELMLLSHVEPNEVTLI 362
Query: 424 SVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDR 483
+V A + G L+ G+ HE V ++ + +L A++DMY KC + A E+F + +
Sbjct: 363 AVVSACSDMGNLEMGKRVHEKVEEKNMRCSLSLHNALLDMYVKCDCLVDARELFDRMATK 422
Query: 484 -----TTSV------------------SP------WNAIICGLAMHGDANLTLKIYSDLE 514
T+ V +P W+A+I G + + +LK++ ++
Sbjct: 423 DVYSWTSMVNGYAKCGDLESARRFFDQTPRKNAVCWSAMIAGYSQNNKPKESLKLFHEMM 482
Query: 515 KRNIKLNSITFIGVLSTCCHAGLVDLGE---RYFKSMKSVYNVEPDLKHYGCMVDLLGRA 571
+R + T + VLS C ++LG+ +YF K + + L++ +VD+ +
Sbjct: 483 ERGVVPIEHTLVSVLSACGQLTCLNLGDWIHQYFVVGK-IIPLSVTLEN--AIVDMYAKC 539
Query: 572 GQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVE 607
G ++ A EV +MP + +++ W T++A +G +
Sbjct: 540 GSIDAATEVFSTMPER-NLISWNTMIAGYAANGRAK 574
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 95/373 (25%), Positives = 175/373 (46%), Gaps = 63/373 (16%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E+ L++ + CS + G+++H + + + + + N+L+++Y KC + A+ +FD
Sbjct: 358 EVTLIAVVSACSDMGNLEMGKRVHEKVEEKNMRCSLSLHNALLDMYVKCDCLVDARELFD 417
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+T D + M++GY + L AR FD+TP K V +++MI G++QN+ +E+L++
Sbjct: 418 RMATKDVYSWTSMVNGYAKCGDLESARRFFDQTPRKNAVCWSAMIAGYSQNNKPKESLKL 477
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHG-LVIKLMIDGFVIISTNLLNMYC 201
F +M GV+P E TL SV+S+ L + +H V+ +I V + +++MY
Sbjct: 478 FHEMMERGVVPIEHTLVSVLSACGQLTCLNLGDWIHQYFVVGKIIPLSVTLENAIVDMYA 537
Query: 202 VCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDG 261
C S+ A +F M ERN++SWN M+ G+A G
Sbjct: 538 KCGSIDAATEVFSTMPERNLISWNTMIAGYAANG-------------------------- 571
Query: 262 YLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCY 321
R +A+ ++ M G PN++ V L++AC H ++ G + +
Sbjct: 572 -----RAKQAINVFDQMRNMGFEPNNITFVSLLTACS-----------HGGLISEGREYF 615
Query: 322 DFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQK 381
D N+ R + GIK + ++ R G++E+A +L NM
Sbjct: 616 D----------------NMER---KYGIKPERGHYACMVDLLGRTGLLEEAYKLIANMPM 656
Query: 382 RDVY-SWSAMISG 393
+ +W A+++
Sbjct: 657 QPCEAAWGALLNA 669
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 117/266 (43%), Gaps = 6/266 (2%)
Query: 348 GIKDHIASWNALIA--GFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALE 405
GI H + +IA +G + A +FN +++ + + W+ MI GY +P A
Sbjct: 184 GIITHAFPVSRVIAFCALAHSGDLHYAHTIFNRVEQPNTFMWNTMIRGYQNARKPIFAFS 243
Query: 406 LFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYA 465
F M V+ + + V A T+ EG + V + +I YA
Sbjct: 244 FFVYMFQLRVEMDSRSFVFALKACQQFETVFEGESVYCVVWKMGFDCELLVRNGLIHFYA 303
Query: 466 KCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITF 525
+ G + A +VF D+ V W +I G A H + ++++ + +++ N +T
Sbjct: 304 ERGLLKNARQVFDESSDK--DVVTWTTMIDGYAAHDCSEEAMEVFELMLLSHVEPNEVTL 361
Query: 526 IGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMP 585
I V+S C G +++G+R + ++ N+ L + ++D+ + L DA E+ M
Sbjct: 362 IAVVSACSDMGNLEMGKRVHEKVEE-KNMRCSLSLHNALLDMYVKCDCLVDARELFDRMA 420
Query: 586 MKADVVIWGTLLAASRIHGNVEVGER 611
K DV W +++ G++E R
Sbjct: 421 TK-DVYSWTSMVNGYAKCGDLESARR 445
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 93/222 (41%), Gaps = 34/222 (15%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHS-LIFKSGLESNTFIQNSLINLYAKCGLISQAKSMF 81
E LVS L C ++ G IH + + + ++N+++++YAKCG I
Sbjct: 490 EHTLVSVLSACGQLTCLNLGDWIHQYFVVGKIIPLSVTLENAIVDMYAKCGSI------- 542
Query: 82 DSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALE 141
+ A EVF P + +S+ +MI G+A N ++A+
Sbjct: 543 ------------------------DAATEVFSTMPERNLISWNTMIAGYAANGRAKQAIN 578
Query: 142 VFRDMRILGVIPNEVTLASVISSSVHLGGIWECR-MLHGLVIKLMIDGFVIISTNLLNMY 200
VF MR +G PN +T S++++ H G I E R + K I ++++
Sbjct: 579 VFDQMRNMGFEPNNITFVSLLTACSHGGLISEGREYFDNMERKYGIKPERGHYACMVDLL 638
Query: 201 CVCSSLVEARSLFDEMKERNI-VSWNVMLNGFAKAGLVELAR 241
L EA L M + +W +LN G VELAR
Sbjct: 639 GRTGLLEEAYKLIANMPMQPCEAAWGALLNACRMHGNVELAR 680
>gi|359497290|ref|XP_002268807.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Vitis vinifera]
Length = 719
Score = 325 bits (832), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 201/635 (31%), Positives = 321/635 (50%), Gaps = 66/635 (10%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
L+ C A +S G+ +HSL KS + +T+ N I LY+KCG ++ A+ F S +
Sbjct: 15 LKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDISDPNV 74
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
+ N +I+ Y + R A ++FD+ P VSY ++I +A AL +F MR +
Sbjct: 75 FSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMREM 134
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
G+ + TL++VI++ G+ LH + + D +V ++ LL Y L +A
Sbjct: 135 GLDMDGFTLSAVITACCDDVGL--IGQLHSVAVSSGFDSYVSVNNALLTYYGKNGDLDDA 192
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLS 269
+ +F + G+ +D VSW +MI Y Q + S
Sbjct: 193 KRVF-----------------YGMGGI-------------RDEVSWNSMIVAYGQHQEGS 222
Query: 270 EALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATII 329
+AL +++ M+ G+ + + +++A GLQ H ++K GF + + +I
Sbjct: 223 KALGLFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLI 282
Query: 330 HFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSA 389
Y+ CG G + D R++F + + D+ W+
Sbjct: 283 DLYSKCG------------------------------GGMSDCRKVFEEITEPDLVLWNT 312
Query: 390 MISGYAQNEQ-PNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNN 448
M+SGY+QNE+ ALE F M G +PN+ + V V A ++ + +G+ H L +
Sbjct: 313 MVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALKS 372
Query: 449 SITLND-NLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTL 507
I N ++ A+I MY+KCG++ A +F + + T N++I G A HG +L
Sbjct: 373 DIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTV--SLNSMIAGYAQHGIEMESL 430
Query: 508 KIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDL 567
++ + +R I SITFI VLS C H G V+ G YF MK +N+EP+ +HY CM+DL
Sbjct: 431 HLFQWMLERQIAPTSITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDL 490
Query: 568 LGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSR 627
LGRAG+L +AE +I MP + W +LL A R HGN+E+ +AA + L+PS+
Sbjct: 491 LGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTHGNIELAVKAANQVLQLEPSNAAPY 550
Query: 628 VLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
V+LSN+YA AGRWE+ ++RK MRD G+K+ PG S
Sbjct: 551 VVLSNMYASAGRWEEVATVRKFMRDRGVKKKPGCS 585
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 148/314 (47%), Gaps = 18/314 (5%)
Query: 293 LISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDH 352
L+ C G +HS+ +K+ + I Y+ CGR+ AR F+ +
Sbjct: 14 LLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDISDPN 73
Query: 353 IASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVD 412
+ S+NA+IA + + A QLF+ + + D+ S++ +IS YA + AL LF GM +
Sbjct: 74 VFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMRE 133
Query: 413 AGVKPNEITMVSVFCAIASS-GTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSIN 471
G+ + T+ +V A G + + H +++ +++ A++ Y K G ++
Sbjct: 134 MGLDMDGFTLSAVITACCDDVGLIGQ---LHSVAVSSGFDSYVSVNNALLTYYGKNGDLD 190
Query: 472 TAFEVFY---HIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGV 528
A VFY IRD + WN++I H + + L ++ ++ +R + ++ T V
Sbjct: 191 DAKRVFYGMGGIRDEVS----WNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASV 246
Query: 529 LST-CCHAGLVDLGERYFKSMKSVYNVEPDLKHYGC-MVDLLGR-AGQLEDAEEVIRSMP 585
L+ C L + + + +K+ ++ H G ++DL + G + D +V +
Sbjct: 247 LTAFTCLEDLSGGLQFHGQLIKTGFHQN---SHVGSGLIDLYSKCGGGMSDCRKVFEEI- 302
Query: 586 MKADVVIWGTLLAA 599
+ D+V+W T+++
Sbjct: 303 TEPDLVLWNTMVSG 316
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 114/268 (42%), Gaps = 39/268 (14%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTF-IQNSLINLYAKCGLISQAKSMF 81
+ + V + CS + SQG+QIHSL KS + SN + N+LI +Y+KCG + A+ +F
Sbjct: 343 DCSFVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLF 402
Query: 82 DSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALE 141
D + + V+ N SMI G+AQ+ E+L
Sbjct: 403 DRMAEHNTVSLN-------------------------------SMIAGYAQHGIEMESLH 431
Query: 142 VFRDMRILGVIPNEVTLASVISSSVHLGGIWEC-RMLHGLVIKLMIDGFVIISTNLLNMY 200
+F+ M + P +T SV+S+ H G + E + + K I+ + ++++
Sbjct: 432 LFQWMLERQIAPTSITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDLL 491
Query: 201 CVCSSLVEARSLFDEMK-ERNIVSWNVMLNGFAKAGLVEL----ARELFERIPSKDVVSW 255
L EA +L M + W +L G +EL A ++ + PS + +
Sbjct: 492 GRAGKLSEAENLIARMPFNPGSIGWASLLGACRTHGNIELAVKAANQVLQLEPS-NAAPY 550
Query: 256 GTMIDGYLQVERLSEALTMYRAMLCDGI 283
+ + Y R E T+ + M G+
Sbjct: 551 VVLSNMYASAGRWEEVATVRKFMRDRGV 578
>gi|15233584|ref|NP_193218.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274931|sp|O23337.1|PP311_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g14820
gi|2244839|emb|CAB10261.1| hypothetical protein [Arabidopsis thaliana]
gi|7268228|emb|CAB78524.1| hypothetical protein [Arabidopsis thaliana]
gi|332658106|gb|AEE83506.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 722
Score = 325 bits (832), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 169/531 (31%), Positives = 303/531 (57%), Gaps = 39/531 (7%)
Query: 137 REALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKL--MIDGFVIIST 194
R + ++ +R +G ++ + ++ + + ++E LHG+ K+ + D FV T
Sbjct: 93 RATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGVAFKIATLCDPFV--ET 150
Query: 195 NLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVS 254
++MY C G + AR +F+ + +DVV+
Sbjct: 151 GFMDMYASC-------------------------------GRINYARNVFDEMSHRDVVT 179
Query: 255 WGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIV 314
W TMI+ Y + + EA ++ M + P+++++ +++SACGR I+ ++
Sbjct: 180 WNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLI 239
Query: 315 KAGFDCYDFIQATIIHFYAACGRINLARLQF-ELGIKDHIASWNALIAGFIRNGMIEDAR 373
+ + ++ YA G +++AR F ++ +++ S A+++G+ + G ++DA+
Sbjct: 240 ENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVS-TAMVSGYSKCGRLDDAQ 298
Query: 374 QLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSG 433
+F+ +K+D+ W+ MIS Y +++ P AL +F M +G+KP+ ++M SV A A+ G
Sbjct: 299 VIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLG 358
Query: 434 TLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAI 493
L + +W H + N + +++ A+I+MYAKCG ++ +VF + R +V W+++
Sbjct: 359 ILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRR--NVVSWSSM 416
Query: 494 ICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYN 553
I L+MHG+A+ L +++ +++ N++ N +TF+GVL C H+GLV+ G++ F SM YN
Sbjct: 417 INALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYN 476
Query: 554 VEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAA 613
+ P L+HYGCMVDL GRA L +A EVI SMP+ ++VVIWG+L++A RIHG +E+G+ AA
Sbjct: 477 ITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAA 536
Query: 614 KSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
K + L+P H + VL+SNIYA RWED +IR+ M + + + G S +
Sbjct: 537 KRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRI 587
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 134/568 (23%), Positives = 246/568 (43%), Gaps = 105/568 (18%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
+ + + L+ S A+ +G ++H + FK + F++ +++YA CG
Sbjct: 111 QFSFLPILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCG---------- 160
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
R+N AR VFD+ + V++ +MI + + EA ++
Sbjct: 161 ---------------------RINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKL 199
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
F +M+ V+P+E+ L +++S+ G + R ++ +I+ + + T L+ MY
Sbjct: 200 FEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAG 259
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
+ AR F +M RN+ M++G++K G ++ A+ +F++ KD+V W TMI Y
Sbjct: 260 AGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAY 319
Query: 263 LQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD 322
++ + EAL ++ M C GI P+ V + +ISAC + +HS I G +
Sbjct: 320 VESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESEL 379
Query: 323 FIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKR 382
I +I+ YA CG ++ R FE + ++ SW+++I +G DA LF M++
Sbjct: 380 SINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQE 439
Query: 383 DVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAH 442
+ V+PNE+T V V + SG ++EG+
Sbjct: 440 N-------------------------------VEPNEVTFVGVLYGCSHSGLVEEGK--- 465
Query: 443 EYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGD 502
+ A++ D Y +I E + C + + G
Sbjct: 466 ------------KIFASMTDEY----NITPKLEHYG----------------CMVDLFGR 493
Query: 503 ANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYG 562
ANL + +E + N + + ++S C G ++LG+ + K + +EPD H G
Sbjct: 494 ANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKF---AAKRILELEPD--HDG 548
Query: 563 CMV---DLLGRAGQLEDAEEVIRSMPMK 587
+V ++ R + ED + R M K
Sbjct: 549 ALVLMSNIYAREQRWEDVRNIRRVMEEK 576
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 97/372 (26%), Positives = 181/372 (48%), Gaps = 11/372 (2%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E+ L + + C + + I+ + ++ + +T + +L+ +YA G + A+ F
Sbjct: 212 EMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFR 271
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
S + M+SGY + RL+DA+ +FD+T K V +T+MI + ++D +EAL V
Sbjct: 272 KMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRV 331
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
F +M G+ P+ V++ SVIS+ +LG + + + +H + ++ + I+ L+NMY
Sbjct: 332 FEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAK 391
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDV----VSWGTM 258
C L R +F++M RN+VSW+ M+N + G A LF R+ ++V V++ +
Sbjct: 392 CGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGV 451
Query: 259 IDGYLQVERLSEALTMYRAMLCD-GIAPNDVMIVDLISACGRAMAFGEGLQ-IHSIIVKA 316
+ G + E ++ +M + I P ++ GRA E L+ I S+ V +
Sbjct: 452 LYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVAS 511
Query: 317 GFDCY-DFIQATIIHFYAACGRINLAR-LQFELGIKDHIASWNALIAGFIRNGMIEDARQ 374
+ + A IH G+ R L+ E DH + + + R ED R
Sbjct: 512 NVVIWGSLMSACRIHGELELGKFAAKRILELE---PDHDGALVLMSNIYAREQRWEDVRN 568
Query: 375 LFNNMQKRDVYS 386
+ M++++V+
Sbjct: 569 IRRVMEEKNVFK 580
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/248 (20%), Positives = 98/248 (39%), Gaps = 43/248 (17%)
Query: 387 WSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVL 446
++ + +++ +P + + + G + ++ + + + A++ L EG H
Sbjct: 79 FNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGVAF 138
Query: 447 NNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLT 506
+ + + +DMYA CG IN A VF + R V WN +I G +
Sbjct: 139 KIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHR--DVVTWNTMIERYCRFGLVDEA 196
Query: 507 LKIYSDLEKRNIKLNSITFIGVLSTCCH-------------------------------- 534
K++ +++ N+ + + ++S C
Sbjct: 197 FKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTM 256
Query: 535 ---AGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVV 591
AG +D+ +F+ M SV N L MV + G+L+DA +VI K D+V
Sbjct: 257 YAGAGCMDMAREFFRKM-SVRN----LFVSTAMVSGYSKCGRLDDA-QVIFDQTEKKDLV 310
Query: 592 IWGTLLAA 599
W T+++A
Sbjct: 311 CWTTMISA 318
>gi|296084942|emb|CBI28351.3| unnamed protein product [Vitis vinifera]
Length = 770
Score = 325 bits (832), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 192/573 (33%), Positives = 306/573 (53%), Gaps = 71/573 (12%)
Query: 95 MISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPN 154
++ Y++ + + D VFD+ +K VS+TS++ G+ QN +AL++F M++ G+ PN
Sbjct: 133 LVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQNGLNEQALKLFSQMQLEGIKPN 192
Query: 155 EVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFD 214
T A+V+ G + + +H +VIK +D + + +++NMY + +A+++FD
Sbjct: 193 PFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFD 252
Query: 215 EMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTM 274
M+ RN VSWN M+ GF GL A ELF R
Sbjct: 253 SMENRNAVSWNSMIAGFVTNGLDLEAFELFYR---------------------------- 284
Query: 275 YRAMLCDGIAPNDVMIVDLISACG--RAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFY 332
M +G+ + +I C + M+F + Q+H ++K G D I+ ++ Y
Sbjct: 285 ---MRLEGVKLTQTIFATVIKLCANIKEMSFAK--QLHCQVIKNGSDFDLNIKTALMVAY 339
Query: 333 AACGRINLARLQFEL--GIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAM 390
+ C I+ A F + G+++ + SW A+I+G+++NG + A LF M++ +
Sbjct: 340 SKCSEIDDAFKLFCMMHGVQN-VVSWTAIISGYVQNGRTDRAMNLFCQMRREE------- 391
Query: 391 ISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIAS-SGTLKEGRWAHEYVLNNS 449
GV+PNE T SV A A+ + ++++G+ H + +
Sbjct: 392 -----------------------GVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSG 428
Query: 450 ITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKI 509
+ +S+A++ MYAK G+I +A EVF DR + WN++I G A HG +LKI
Sbjct: 429 FSNALCVSSALVTMYAKRGNIESANEVFKRQVDR--DLVSWNSMISGYAQHGCGKKSLKI 486
Query: 510 YSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLG 569
+ ++ +N++L+ ITFIGV+S C HAGLV+ G+RYF M Y++ P ++HY CMVDL
Sbjct: 487 FEEMRSKNLELDGITFIGVISACTHAGLVNEGQRYFDLMVKDYHIVPTMEHYSCMVDLYS 546
Query: 570 RAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVL 629
RAG LE A ++I MP A IW TLLAA R+H NV++GE AA+ L LQP + VL
Sbjct: 547 RAGMLEKAMDLINKMPFPAGATIWRTLLAACRVHLNVQLGELAAEKLISLQPQDSAAYVL 606
Query: 630 LSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
LSNIYA AG W++ +RK M +K+ G+S
Sbjct: 607 LSNIYATAGNWQERAKVRKLMDMKKVKKEAGYS 639
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 117/475 (24%), Positives = 204/475 (42%), Gaps = 96/475 (20%)
Query: 34 SAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACN 93
+A AV +G Q+H+++ KSGL+S F+ NS++N+Y+K ++S
Sbjct: 204 AADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVS------------------ 245
Query: 94 IMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIP 153
DA+ VFD + VS+ SMI GF N EA E+F MR+ GV
Sbjct: 246 -------------DAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKL 292
Query: 154 NEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLF 213
+ A+VI ++ + + LH VIK D + I T L+ Y CS + +A LF
Sbjct: 293 TQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLF 352
Query: 214 DEMKE-RNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEAL 272
M +N+VSW +++G+ + G + A LF Q+ R
Sbjct: 353 CMMHGVQNVVSWTAIISGYVQNGRTDRAMNLF------------------CQMRRE---- 390
Query: 273 TMYRAMLCDGIAPNDVMIVDLISACGRAMAFGE-GLQIHSIIVKAGFDCYDFIQATIIHF 331
+G+ PN+ +++AC A E G Q HS +K+GF + + ++
Sbjct: 391 --------EGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTM 442
Query: 332 YAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMI 391
YA G I A F+ + + SWN++I+G+ ++G + + ++F M+ ++
Sbjct: 443 YAKRGNIESANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKN-------- 494
Query: 392 SGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG-RWAHEYVLNNSI 450
LEL + IT + V A +G + EG R+ V + I
Sbjct: 495 ------------LEL-----------DGITFIGVISACTHAGLVNEGQRYFDLMVKDYHI 531
Query: 451 TLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANL 505
+ ++D+Y++ G + A ++ + + W ++ +H + L
Sbjct: 532 VPTMEHYSCMVDLYSRAGMLEKAMDLINKM-PFPAGATIWRTLLAACRVHLNVQL 585
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 83/429 (19%), Positives = 191/429 (44%), Gaps = 43/429 (10%)
Query: 240 ARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGR 299
+++LF+ P + + ++ + + ++ EAL ++ + G + + ++ CG
Sbjct: 45 SQQLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGC 104
Query: 300 AMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNAL 359
G Q+H +K GF ++D ++ +L
Sbjct: 105 LFDRIVGKQVHCQCIKCGF------------------------------VED-VSVGTSL 133
Query: 360 IAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNE 419
+ +++ +ED ++F+ M+ ++V SW+++++GY QN AL+LF M G+KPN
Sbjct: 134 VDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQNGLNEQALKLFSQMQLEGIKPNP 193
Query: 420 ITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYH 479
T +V +A+ G +++G H V+ + + + ++++MY+K ++ A VF
Sbjct: 194 FTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFDS 253
Query: 480 IRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVD 539
+ +R +VS WN++I G +G +++ + +KL F V+ C + +
Sbjct: 254 MENR-NAVS-WNSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLCANIKEMS 311
Query: 540 LGER-YFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLA 598
++ + + +K+ + + ++K ++ + +++DA ++ M +VV W +++
Sbjct: 312 FAKQLHCQVIKNGSDFDLNIK--TALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAIIS 369
Query: 599 ASRIHGNVEVGERAAKSLAGLQPSHG--PSRVLLSNIYADAGRWEDAFSIRKEMRDCGMK 656
+G +RA ++ G P+ S++ + K+ C +K
Sbjct: 370 GYVQNGRT---DRAMNLFCQMRREEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIK 426
Query: 657 RLPGFSGVV 665
GFS +
Sbjct: 427 --SGFSNAL 433
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 126/294 (42%), Gaps = 67/294 (22%)
Query: 26 LVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSC- 84
+ ++ C+ +S +Q+H + K+G + + I+ +L+ Y+KC I A +F C
Sbjct: 297 FATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLF--CM 354
Query: 85 --STLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+ V+ +ISGY++N R + A +F C E
Sbjct: 355 MHGVQNVVSWTAIISGYVQNGRTDRAMNLF----------------------CQMRREE- 391
Query: 143 FRDMRILGVIPNEVTLASVISS-SVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYC 201
GV PNE T +SV+++ + + + + H IK + +S+ L+ MY
Sbjct: 392 -------GVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYA 444
Query: 202 VCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDG 261
++ A +F +R++VSWN M++G+A+ G + + ++FE + SK++ +DG
Sbjct: 445 KRGNIESANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKNL-----ELDG 499
Query: 262 YLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVK 315
+ + +ISAC A EG + ++VK
Sbjct: 500 --------------------------ITFIGVISACTHAGLVNEGQRYFDLMVK 527
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 95/227 (41%), Gaps = 62/227 (27%)
Query: 23 ELALVSALRYCSAHIA-VSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMF 81
E S L C+A A V QG+Q HS KSG + + ++L+ +YAK G I A +F
Sbjct: 397 EFTFSSVLNACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVF 456
Query: 82 DSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALE 141
D V+ N MISGY AQ+ C +++L+
Sbjct: 457 KRQVDRDLVSWNSMISGY-------------------------------AQHGCGKKSLK 485
Query: 142 VFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYC 201
+F +MR + + +T VIS+ H G + E + LM+ + I+ T
Sbjct: 486 IFEEMRSKNLELDGITFIGVISACTHAGLVNEGQRY----FDLMVKDYHIVPT------- 534
Query: 202 VCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIP 248
+ ++ M++ +++AG++E A +L ++P
Sbjct: 535 -------------------MEHYSCMVDLYSRAGMLEKAMDLINKMP 562
>gi|356542011|ref|XP_003539465.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Glycine max]
Length = 876
Score = 325 bits (832), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 200/628 (31%), Positives = 318/628 (50%), Gaps = 103/628 (16%)
Query: 38 AVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMIS 97
AV+ G QIH+L+ K G E+ + NSLI++ +K G+
Sbjct: 218 AVAIGMQIHALVVKLGFETERLVCNSLISMLSKSGM------------------------ 253
Query: 98 GYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVT 157
L DAR VFD K VS+ SMI G N EA E F +M++ G P T
Sbjct: 254 -------LRDARVVFDNMENKDSVSWNSMIAGHVINGQDLEAFETFNNMQLAGAKPTHAT 306
Query: 158 LASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMK 217
ASVI S L + R+LH +K + + T L+ C + +A SLF
Sbjct: 307 FASVIKSCASLKELGLVRVLHCKTLKSGLSTNQNVLTALMVALTKCKEIDDAFSLFS--- 363
Query: 218 ERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRA 277
+++G + VVSW MI GYLQ +A+ ++
Sbjct: 364 ---------LMHGV------------------QSVVSWTAMISGYLQNGDTDQAVNLFSL 396
Query: 278 MLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGR 337
M +G+ PN +++ A+ E IH+ ++K ++ +
Sbjct: 397 MRREGVKPNHFTYSTILTV-QHAVFISE---IHAEVIKTNYEKSSSVGT----------- 441
Query: 338 INLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQN 397
AL+ F++ G I DA ++F ++ +DV +WSAM++GYAQ
Sbjct: 442 --------------------ALLDAFVKIGNISDAVKVFELIETKDVIAWSAMLAGYAQA 481
Query: 398 EQPNMALELFHGMVDAGVKPNEITMVSVFCA-IASSGTLKEGRWAHEYVLNNSITLNDNL 456
+ A ++FH + G+KPNE T S+ A A + ++++G+ H Y + + LN+ L
Sbjct: 482 GETEEAAKIFHQLTREGIKPNEFTFCSIINACTAPTASVEQGKQFHAYAIK--LRLNNAL 539
Query: 457 --SAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLE 514
S++++ +YAK G+I +A E+F ++R + WN++I G A HG A L+++ +++
Sbjct: 540 CVSSSLVTLYAKRGNIESAHEIFKRQKER--DLVSWNSMISGYAQHGQAKKALEVFEEMQ 597
Query: 515 KRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQL 574
KRN+++++ITFIGV+S C HAGLV G+ YF M + +++ P ++HY CM+DL RAG L
Sbjct: 598 KRNLEVDAITFIGVISACAHAGLVGKGQNYFNIMINDHHINPTMEHYSCMIDLYSRAGML 657
Query: 575 EDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIY 634
A ++I MP +W +LAASR+H N+E+G+ AA+ + L+P H + VLLSNIY
Sbjct: 658 GKAMDIINGMPFPPAATVWRIVLAASRVHRNIELGKLAAEKIISLEPQHSAAYVLLSNIY 717
Query: 635 ADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
A AG W + ++RK M +K+ PG+S
Sbjct: 718 AAAGNWHEKVNVRKLMDKRRVKKEPGYS 745
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 136/601 (22%), Positives = 250/601 (41%), Gaps = 115/601 (19%)
Query: 14 KANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGL 73
++ L Y ++ V L C+ + G+Q+H K GL + + NSL+++Y K G
Sbjct: 95 RSGLSPDSYTMSCV--LSVCAGSFNGTVGEQVHCQCVKCGLVHHLSVGNSLVDMYTKTGN 152
Query: 74 ISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQN 133
+ + +FD D V+ N +++GY N R ND
Sbjct: 153 VRDGRRVFDEMGDRDVVSWNSLLTGYSWN-RFND-------------------------- 185
Query: 134 DCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIIS 193
+ E+F M++ G P+ T+++VI++ + G + +H LV+KL + ++
Sbjct: 186 ----QVWELFCLMQVEGYRPDYYTVSTVIAALANQGAVAIGMQIHALVVKLGFETERLVC 241
Query: 194 TNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVV 253
+L++M L +AR +FD M+ ++ VSWN M+ G I +D+
Sbjct: 242 NSLISMLSKSGMLRDARVVFDNMENKDSVSWNSMIAGHV--------------INGQDL- 286
Query: 254 SWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSII 313
EA + M G P +I +C G +H
Sbjct: 287 ----------------EAFETFNNMQLAGAKPTHATFASVIKSCASLKELGLVRVLHCKT 330
Query: 314 VKAGFDCYDFIQATIIHFYAACGRINLARLQFEL--GIKDHIASWNALIAGFIRNGMIED 371
+K+G + ++ C I+ A F L G++ + SW A+I+G+++NG +
Sbjct: 331 LKSGLSTNQNVLTALMVALTKCKEIDDAFSLFSLMHGVQS-VVSWTAMISGYLQNGDTDQ 389
Query: 372 ARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIAS 431
A LF+ M++ GVKPN T ++ +
Sbjct: 390 AVNLFSLMRRE-------------------------------GVKPNHFTYSTIL-TVQH 417
Query: 432 SGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWN 491
+ + E H V+ + + ++ A++D + K G+I+ A +VF I T V W+
Sbjct: 418 AVFISE---IHAEVIKTNYEKSSSVGTALLDAFVKIGNISDAVKVFELI--ETKDVIAWS 472
Query: 492 AIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTC-CHAGLVDLGERYFKSMKS 550
A++ G A G+ KI+ L + IK N TF +++ C V+ G+++
Sbjct: 473 AMLAGYAQAGETEEAAKIFHQLTREGIKPNEFTFCSIINACTAPTASVEQGKQF-----H 527
Query: 551 VYNVEPDLKHYGC----MVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNV 606
Y ++ L + C +V L + G +E A E+ + + D+V W ++++ HG
Sbjct: 528 AYAIKLRLNNALCVSSSLVTLYAKRGNIESAHEIFKRQKER-DLVSWNSMISGYAQHGQA 586
Query: 607 E 607
+
Sbjct: 587 K 587
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 130/526 (24%), Positives = 233/526 (44%), Gaps = 73/526 (13%)
Query: 100 IRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLA 159
+R+ A+++FD+TP++ + ++ +++ D +EAL +F + G+ P+ T++
Sbjct: 47 LRDSDPRFAQQLFDQTPLRDLKQHNQLLFRYSRCDQTQEALHLFVSLYRSGLSPDSYTMS 106
Query: 160 SVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKER 219
V+S V +G V ++ CV LV S+
Sbjct: 107 CVLS-----------------VCAGSFNGTV---GEQVHCQCVKCGLVHHLSV------- 139
Query: 220 NIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAML 279
N +++ + K G V R +F+ + +DVVSW +++ GY + ++ M
Sbjct: 140 ----GNSLVDMYTKTGNVRDGRRVFDEMGDRDVVSWNSLLTGYSWNRFNDQVWELFCLMQ 195
Query: 280 CDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRIN 339
+G P+ + +I+A A G+QIH+++VK GF+ + ++I + G +
Sbjct: 196 VEGYRPDYYTVSTVIAALANQGAVAIGMQIHALVVKLGFETERLVCNSLISMLSKSGMLR 255
Query: 340 LARLQFE-LGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNE 398
AR+ F+ + KD + SWN++IAG + NG +A + FNNMQ
Sbjct: 256 DARVVFDNMENKDSV-SWNSMIAGHVINGQDLEAFETFNNMQL----------------- 297
Query: 399 QPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSA 458
AG KP T SV + AS L R H L + ++ N N+
Sbjct: 298 --------------AGAKPTHATFASVIKSCASLKELGLVRVLHCKTLKSGLSTNQNVLT 343
Query: 459 AIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNI 518
A++ KC I+ AF +F + SV W A+I G +GD + + ++S + + +
Sbjct: 344 ALMVALTKCKEIDDAFSLF-SLMHGVQSVVSWTAMISGYLQNGDTDQAVNLFSLMRREGV 402
Query: 519 KLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAE 578
K N T+ +L T HA V + E + + +K+ Y + ++D + G + DA
Sbjct: 403 KPNHFTYSTIL-TVQHA--VFISEIHAEVIKTNYEKSSSVG--TALLDAFVKIGNISDAV 457
Query: 579 EVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLA--GLQPS 622
+V + K DV+ W +LA G E + L G++P+
Sbjct: 458 KVFELIETK-DVIAWSAMLAGYAQAGETEEAAKIFHQLTREGIKPN 502
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 91/402 (22%), Positives = 189/402 (47%), Gaps = 42/402 (10%)
Query: 239 LARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACG 298
A++LF++ P +D+ ++ Y + ++ EAL ++ ++ G++P+ + ++S C
Sbjct: 54 FAQQLFDQTPLRDLKQHNQLLFRYSRCDQTQEALHLFVSLYRSGLSPDSYTMSCVLSVCA 113
Query: 299 RAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNA 358
+ G Q+H VK G ++H H++ N+
Sbjct: 114 GSFNGTVGEQVHCQCVKCG----------LVH---------------------HLSVGNS 142
Query: 359 LIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPN 418
L+ + + G + D R++F+ M RDV SW+++++GY+ N + ELF M G +P+
Sbjct: 143 LVDMYTKTGNVRDGRRVFDEMGDRDVVSWNSLLTGYSWNRFNDQVWELFCLMQVEGYRPD 202
Query: 419 EITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFY 478
T+ +V A+A+ G + G H V+ + ++I M +K G + A VF
Sbjct: 203 YYTVSTVIAALANQGAVAIGMQIHALVVKLGFETERLVCNSLISMLSKSGMLRDARVVFD 262
Query: 479 HIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLV 538
++ ++ SVS WN++I G ++G + +++++ K TF V+ +C A L
Sbjct: 263 NMENK-DSVS-WNSMIAGHVINGQDLEAFETFNNMQLAGAKPTHATFASVIKSC--ASLK 318
Query: 539 DLG---ERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGT 595
+LG + K++KS + ++ ++ L + +++DA + M VV W
Sbjct: 319 ELGLVRVLHCKTLKSGLSTNQNV--LTALMVALTKCKEIDDAFSLFSLMHGVQSVVSWTA 376
Query: 596 LLAASRIHGNVE--VGERAAKSLAGLQPSHGPSRVLLSNIYA 635
+++ +G+ + V + G++P+H +L+ +A
Sbjct: 377 MISGYLQNGDTDQAVNLFSLMRREGVKPNHFTYSTILTVQHA 418
Score = 108 bits (271), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 107/478 (22%), Positives = 203/478 (42%), Gaps = 104/478 (21%)
Query: 3 LDHFHSVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQN 62
L+ F + N Q A + + A S ++ C++ + + +H KSGL +N +
Sbjct: 286 LEAFETFNNMQLAGAKPTHATFA--SVIKSCASLKELGLVRVLHCKTLKSGLSTNQNVLT 343
Query: 63 SLINLYAKCGLISQAKSMFDSCSTLDPVAC-NIMISGYIRNDRLNDAREVFDKTPIKCCV 121
+L+ KC I A S+F + V MISGY++N +
Sbjct: 344 ALMVALTKCKEIDDAFSLFSLMHGVQSVVSWTAMISGYLQNGDTD--------------- 388
Query: 122 SYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLV 181
+A+ +F MR GV PN T +++++ H I E +H V
Sbjct: 389 ----------------QAVNLFSLMRREGVKPNHFTYSTILTVQ-HAVFISE---IHAEV 428
Query: 182 IKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELAR 241
IK + + T LL+ + ++ +A +F+ ++ +++++W+ ML G+A+AG E A
Sbjct: 429 IKTNYEKSSSVGTALLDAFVKIGNISDAVKVFELIETKDVIAWSAMLAGYAQAGETEEAA 488
Query: 242 ELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAM 301
++F ++ +GI PN+ +I+AC
Sbjct: 489 KIFHQLTR-------------------------------EGIKPNEFTFCSIINACTAPT 517
Query: 302 AFGE-GLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALI 360
A E G Q H+ +K + + ++++ YA G I A F+ + + SWN++I
Sbjct: 518 ASVEQGKQFHAYAIKLRLNNALCVSSSLVTLYAKRGNIESAHEIFKRQKERDLVSWNSMI 577
Query: 361 AGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEI 420
+G+ ++G + A ++F MQKR++ VDA I
Sbjct: 578 SGYAQHGQAKKALEVFEEMQKRNL-------------------------EVDA------I 606
Query: 421 TMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLS--AAIIDMYAKCGSINTAFEV 476
T + V A A +G + +G+ ++N+ +N + + +ID+Y++ G + A ++
Sbjct: 607 TFIGVISACAHAGLVGKGQNYFNIMINDH-HINPTMEHYSCMIDLYSRAGMLGKAMDI 663
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 130/278 (46%), Gaps = 8/278 (2%)
Query: 349 IKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFH 408
++ H+ + NA +R+ A+QLF+ RD+ + ++ Y++ +Q AL LF
Sbjct: 34 LQSHVVALNART--LLRDSDPRFAQQLFDQTPLRDLKQHNQLLFRYSRCDQTQEALHLFV 91
Query: 409 GMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCG 468
+ +G+ P+ TM V A S G H + + + ++ +++DMY K G
Sbjct: 92 SLYRSGLSPDSYTMSCVLSVCAGSFNGTVGEQVHCQCVKCGLVHHLSVGNSLVDMYTKTG 151
Query: 469 SINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGV 528
++ VF + DR V WN+++ G + + + +++ ++ + + T V
Sbjct: 152 NVRDGRRVFDEMGDR--DVVSWNSLLTGYSWNRFNDQVWELFCLMQVEGYRPDYYTVSTV 209
Query: 529 LSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKA 588
++ + G V +G + ++ E + ++ +L ++G L DA V +M K
Sbjct: 210 IAALANQGAVAIGMQ-IHALVVKLGFETERLVCNSLISMLSKSGMLRDARVVFDNMENK- 267
Query: 589 DVVIWGTLLAASRIHG-NVEVGERAAK-SLAGLQPSHG 624
D V W +++A I+G ++E E LAG +P+H
Sbjct: 268 DSVSWNSMIAGHVINGQDLEAFETFNNMQLAGAKPTHA 305
>gi|224077074|ref|XP_002305120.1| predicted protein [Populus trichocarpa]
gi|222848084|gb|EEE85631.1| predicted protein [Populus trichocarpa]
Length = 786
Score = 325 bits (832), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 214/711 (30%), Positives = 330/711 (46%), Gaps = 136/711 (19%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E A S L+ C+ + G+Q+H ++ +G +S+ F+ NSL+ LYAKCG
Sbjct: 10 EFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCG---------- 59
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
DAR +FD P + VS+ ++ + +D EA+ +
Sbjct: 60 ---------------------GFGDARSLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSL 98
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
F DM + G+ PNE +L+S+I+ L + R +HG +IKL D + L++MY
Sbjct: 99 FHDMVLSGIRPNEFSLSSMINVCTGLEDSVQGRKIHGYLIKLGYDSDAFSANALVDMYAK 158
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
L +A S+FDE+ + +IVSWN +I G
Sbjct: 159 VGILEDASSVFDEIAKPDIVSWN-------------------------------AIIAGC 187
Query: 263 LQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGE-GLQIHSIIVKAGFDCY 321
+ E AL + R M G+ PN + + AC MA E G Q+HS ++K
Sbjct: 188 VLHEYHHRALELLREMNKSGMCPNMFTLSSALKACA-GMALRELGRQLHSSLIKMDMGSD 246
Query: 322 DFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQK 381
F+ +I Y+ C ++ ARL F+L + + +WNA+I+G +N E+A LF M
Sbjct: 247 SFLGVGLIDMYSKCNSMDDARLVFKLMPERDMIAWNAVISGHSQNEEDEEAASLFPLMHT 306
Query: 382 R---------------------------------------DVYSWSAMISGYAQ------ 396
D Y +++I Y +
Sbjct: 307 EGIGFNQTTLSTVLKSIAALQANYMCRQIHALSLKSGFEFDNYVVNSLIDTYGKCGHVED 366
Query: 397 -----NEQPNMALELFHGMV--------------------DAGVKPNEITMVSVFCAIAS 431
E P + L LF +V D G+KP+ S+ A AS
Sbjct: 367 ATRVFEESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRGIKPDSFVCSSLLNACAS 426
Query: 432 SGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWN 491
++G+ H ++L + ++++MYAKCGSI A F I R + W+
Sbjct: 427 LSAYEQGKQVHVHILKFGFMSDIFAGNSLVNMYAKCGSIEDASCAFSRIPVR--GIVSWS 484
Query: 492 AIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSV 551
A+I GLA HG L+++ + K + N IT + VL C HAGLV + YF SMK +
Sbjct: 485 AMIGGLAQHGYGKEALQLFKQMLKVGVPPNHITLVSVLCACNHAGLVAEAKHYFNSMKIL 544
Query: 552 YNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGER 611
+ +EP +HY CM+DLLGRAG+LE A E++ MP +A+ ++WG LL A+RIH N+++GE+
Sbjct: 545 FGIEPMQEHYACMIDLLGRAGKLEAAMELVNKMPFQANALVWGALLGAARIHKNIDLGEQ 604
Query: 612 AAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
AA+ L L+P + VLL+NIYA G W+ +R+ M+D +K+ PG S
Sbjct: 605 AAEMLLALEPEKSGTHVLLANIYASVGMWDKVARVRRLMKDGKVKKEPGMS 655
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 120/511 (23%), Positives = 203/511 (39%), Gaps = 100/511 (19%)
Query: 146 MRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSS 205
M +LG+ NE SV+ + + + +HG+V+ D ++ +L+ +Y C
Sbjct: 1 MHLLGIKCNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGG 60
Query: 206 LVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQV 265
+ARSL F+ IP + VVSW + Y+
Sbjct: 61 FGDARSL-------------------------------FDAIPDRSVVSWNALFSCYVHS 89
Query: 266 ERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQ 325
+ EA++++ M+ GI PN+ + +I+ C +G +IH ++K G+D F
Sbjct: 90 DMHGEAVSLFHDMVLSGIRPNEFSLSSMINVCTGLEDSVQGRKIHGYLIKLGYDSDAFSA 149
Query: 326 ATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVY 385
++ YA G + A F+ K I SWNA+IAG +
Sbjct: 150 NALVDMYAKVGILEDASSVFDEIAKPDIVSWNAIIAGCVL-------------------- 189
Query: 386 SWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYV 445
+E + ALEL M +G+ PN T+ S A A + GR H +
Sbjct: 190 -----------HEYHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSL 238
Query: 446 LNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANL 505
+ + + L +IDMY+KC S++ A VF + +R + WNA+I G + + +
Sbjct: 239 IKMDMGSDSFLGVGLIDMYSKCNSMDDARLVFKLMPER--DMIAWNAVISGHSQNEEDEE 296
Query: 506 TLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMV 565
++ + I N T VL + A + R ++ E D ++
Sbjct: 297 AASLFPLMHTEGIGFNQTTLSTVLKSIA-ALQANYMCRQIHALSLKSGFEFDNYVVNSLI 355
Query: 566 DLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGP 625
D G+ G +EDA V P+ D+V++ +L+ A
Sbjct: 356 DTYGKCGHVEDATRVFEESPI-VDLVLFTSLVTA-------------------------- 388
Query: 626 SRVLLSNIYADAGRWEDAFSIRKEMRDCGMK 656
YA G+ E+A + EM+D G+K
Sbjct: 389 --------YAQDGQGEEALRLYLEMQDRGIK 411
>gi|359488803|ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950 [Vitis vinifera]
Length = 1291
Score = 325 bits (832), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 202/639 (31%), Positives = 323/639 (50%), Gaps = 98/639 (15%)
Query: 29 ALRYCSAHIAVSQGQQIHSLIFKSG-LESNTFIQNSLINLYAKCGLISQAKSMFDSCSTL 87
AL+ C+ + G+ IH K+ + S+ F+ ++L+ LY+KCG + +A +F+
Sbjct: 109 ALKACAGLRMLELGKVIHGFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQRP 168
Query: 88 DPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMR 147
D V +TSM+ G+ QN+ EAL +F M
Sbjct: 169 DTVL-------------------------------WTSMVTGYQQNNDPEEALALFSQMV 197
Query: 148 ILG-VIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSL 206
++ V+ + VTL SV+S+ L + +HGLVI+ DG + + +LLN+Y
Sbjct: 198 MMDCVVLDPVTLVSVVSACAQLLNVKAGSCVHGLVIRREFDGDLPLVNSLLNLY------ 251
Query: 207 VEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVE 266
AK G ++A LF ++P KDV+SW TMI Y E
Sbjct: 252 -------------------------AKTGCEKIAANLFSKMPEKDVISWSTMIACYANNE 286
Query: 267 RLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQA 326
+EAL ++ M+ PN V +V + AC + EG +IH I V GF+ DF +
Sbjct: 287 AANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKGFE-LDFSVS 345
Query: 327 TIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYS 386
T ALI +++ ++A LF + K+DV S
Sbjct: 346 T------------------------------ALIDMYMKCSCPDEAVDLFQRLPKKDVVS 375
Query: 387 WSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVL 446
W A++SGYAQN ++ +F M+ G++P+ + +V + A + G ++ H YV+
Sbjct: 376 WVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVV 435
Query: 447 NNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLT 506
+ N + A++I++Y+KCGS+ A ++F + R + W+++I +HG
Sbjct: 436 RSGFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVI--WSSMIAAYGIHGRGGEA 493
Query: 507 LKIYSDLEKRN-IKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMV 565
L+I+ + K + ++ N++TF+ +LS C HAGLV+ G + F M Y + PD +H+G MV
Sbjct: 494 LEIFDQMVKNSTVRPNNVTFLSILSACSHAGLVEEGLKIFDRMVHDYQLRPDSEHFGIMV 553
Query: 566 DLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGP 625
DLLGR GQL A ++I MP+ A +WG LL A RIH N+E+GE AAK+L L PSH
Sbjct: 554 DLLGRIGQLGKAMDIINRMPIPAGPHVWGALLGACRIHHNIEMGEAAAKNLFWLDPSHAG 613
Query: 626 SRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
+LLSNIYA G+W++ +R +++ G+K++ G S V
Sbjct: 614 YYILLSNIYAVDGKWDNVAELRTRIKERGLKKMFGQSMV 652
Score = 258 bits (660), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 149/452 (32%), Positives = 228/452 (50%), Gaps = 40/452 (8%)
Query: 215 EMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTM 274
+ R + + +M F + ++ A +FE IP+ W MI G+ R +L +
Sbjct: 749 QYDSRILTKFAIMYVSFNR---IDAASIVFEDIPNPCSFLWNVMIRGFATDGRFLSSLEL 805
Query: 275 YRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAA 334
Y M+ G+ P+ + +C G IH +V G F+ A ++ YA
Sbjct: 806 YSKMMEKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVDAALVDMYAK 865
Query: 335 CGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGY 394
CG I E AR +F+ M RD+ SW++MISGY
Sbjct: 866 CGDI-------------------------------EAARLVFDKMAVRDLVSWTSMISGY 894
Query: 395 AQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLND 454
A N + L F M +GV PN ++++SV A + G L++G W H YV+ +
Sbjct: 895 AHNGYNSETLGFFDLMRSSGVIPNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDI 954
Query: 455 NLSAAIIDMYAKCGSINTAFEVFYHIRDRTTS--VSPWNAIICGLAMHGDANLTLKIYSD 512
++ AI+DMY+KCGS++ A +F D T + W+A+I +HG + ++
Sbjct: 955 LVATAIMDMYSKCGSLDLARCLF----DETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQ 1010
Query: 513 LEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAG 572
+ K ++ + +TF VLS C H+GL++ G+ YF+ M + + L +Y CMVDLLGRAG
Sbjct: 1011 MVKAGVRPSHVTFTCVLSACSHSGLLEEGKMYFQLMTEEFVIARKLSNYACMVDLLGRAG 1070
Query: 573 QLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSN 632
QL +A ++I +MP++ D IWG+LL A RIH N+++ E+ A L L P H VLLSN
Sbjct: 1071 QLSEAVDLIENMPVEPDASIWGSLLGACRIHNNLDLAEKIADHLFHLDPVHAGYHVLLSN 1130
Query: 633 IYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
IYA RW + +RK M G ++ GFS V
Sbjct: 1131 IYAAKSRWNEVEKVRKMMARRGANKIQGFSLV 1162
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 117/485 (24%), Positives = 208/485 (42%), Gaps = 108/485 (22%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+ LVS + C+ + V G +H L+ + + + + NSL+NLYAK G A ++F
Sbjct: 207 VTLVSVVSACAQLLNVKAGSCVHGLVIRREFDGDLPLVNSLLNLYAKTGCEKIAANLFSK 266
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
D ++ + MI+ Y N+ N EAL +F
Sbjct: 267 MPEKDVISWSTMIACYANNEAAN-------------------------------EALNLF 295
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
+M PN VT+ S + + + E + +H + + + +ST L++MY C
Sbjct: 296 HEMIEKRFEPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKGFELDFSVSTALIDMYMKC 355
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYL 263
S EA LF + ++++VSW +L+G+A+ G+
Sbjct: 356 SCPDEAVDLFQRLPKKDVVSWVALLSGYAQNGMA-------------------------- 389
Query: 264 QVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDF 323
+++ ++R ML DGI P+ V +V +++A F + L +H +V++GF+ F
Sbjct: 390 -----YKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVRSGFNSNVF 444
Query: 324 IQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRD 383
+ A++I Y+ CG + DA +LF M RD
Sbjct: 445 VGASLIELYSKCGSLG-------------------------------DAVKLFKGMIVRD 473
Query: 384 VYSWSAMISGYAQNEQPNMALELFHGMV-DAGVKPNEITMVSVFCAIASSGTLKEG---- 438
V WS+MI+ Y + + ALE+F MV ++ V+PN +T +S+ A + +G ++EG
Sbjct: 474 VVIWSSMIAAYGIHGRGGEALEIFDQMVKNSTVRPNNVTFLSILSACSHAGLVEEGLKIF 533
Query: 439 -RWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSP--WNAIIC 495
R H+Y L + ++D+ + G + A ++ I P W A++
Sbjct: 534 DRMVHDYQLRP----DSEHFGIMVDLLGRIGQLGKAMDI---INRMPIPAGPHVWGALLG 586
Query: 496 GLAMH 500
+H
Sbjct: 587 ACRIH 591
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 102/418 (24%), Positives = 187/418 (44%), Gaps = 68/418 (16%)
Query: 99 YIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTL 158
Y+ +R++ A VF+ P C + MI GFA + + +LE++ M G+ P++
Sbjct: 762 YVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATDGRFLSSLELYSKMMEKGLKPDKFAF 821
Query: 159 ASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKE 218
+ S L + +++H ++ + + L++MY C + AR +FD+M
Sbjct: 822 PFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVDAALVDMYAKCGDIEAARLVFDKMAV 881
Query: 219 RNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAM 278
R++VSW M++G+A G SE L + M
Sbjct: 882 RDLVSWTSMISGYAHNGYN-------------------------------SETLGFFDLM 910
Query: 279 LCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQAT-IIHFYAACGR 337
G+ PN V I+ ++ ACG A +G HS +++ GF+ +D + AT I+ Y+ CG
Sbjct: 911 RSSGVIPNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFE-FDILVATAIMDMYSKCGS 969
Query: 338 INLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQN 397
++LAR F+ + W+A+IA + I G+ +
Sbjct: 970 LDLARCLFDETAGKDLVCWSAMIASY--------------------------GIHGHGRK 1003
Query: 398 EQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLS 457
A++LF MV AGV+P+ +T V A + SG L+EG+ + ++ + LS
Sbjct: 1004 -----AIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLEEGKMYFQ-LMTEEFVIARKLS 1057
Query: 458 --AAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDL 513
A ++D+ + G ++ A ++ ++ + S W +++ +H + +L KI L
Sbjct: 1058 NYACMVDLLGRAGQLSEAVDLIENMPVEPDA-SIWGSLLGACRIHNNLDLAEKIADHL 1114
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 138/301 (45%), Gaps = 54/301 (17%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
+ A AL+ C+ + +G+ IH + G ++ F+ +L+++YAKCG I A+ +FD
Sbjct: 818 KFAFPFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVDAALVDMYAKCGDIEAARLVFD 877
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+ D V+ MISGY N Y S +GF
Sbjct: 878 KMAVRDLVSWTSMISGYAHN-------------------GYNSETLGF------------ 906
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
F MR GVIPN V++ SV+ + +LG + + H VI+ + ++++T +++MY
Sbjct: 907 FDLMRSSGVIPNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSK 966
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERI------PSKDVVSW- 255
C SL AR LFDE +++V W+ M+ + G A +LF+++ PS +
Sbjct: 967 CGSLDLARCLFDETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCV 1026
Query: 256 -------GTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQ 308
G + +G + + ++E + R + N +VDL+ GRA E +
Sbjct: 1027 LSACSHSGLLEEGKMYFQLMTEEFVIARKL------SNYACMVDLL---GRAGQLSEAVD 1077
Query: 309 I 309
+
Sbjct: 1078 L 1078
>gi|356564579|ref|XP_003550529.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g22760-like [Glycine max]
Length = 576
Score = 325 bits (832), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 196/599 (32%), Positives = 319/599 (53%), Gaps = 51/599 (8%)
Query: 62 NSLINLYAKCGLISQAKS-----MFDSCSTLDPVACNIMISGYIRNDRL--NDAREVFDK 114
LI L KC + QAK + + + L P+ + M+ + N R N A +
Sbjct: 4 TKLITLMKKCSTVKQAKQIHAHILINGFTFLRPLLIHRMLLWDVTNYRTMANYAYSMLHH 63
Query: 115 TPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWEC 174
I S+ +I F+Q + EA+ ++ M + P ++S + S + +
Sbjct: 64 LHIPDSFSWGCVIRFFSQKCLFTEAVSLYVQMHRTSLCPTSHAVSSALKSCARIHDMLCG 123
Query: 175 RMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKA 234
+HG V + V + T LL++Y + AR +FDEM +++VSWN +L+G+ KA
Sbjct: 124 MSIHGQVHVFGFNTCVYVQTALLDLYSKIGDMGTARKVFDEMANKSVVSWNSLLSGYVKA 183
Query: 235 GLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLI 294
G ++ A+ LF IP KDV+SW +MI GY + + +A T+++ M ++ + MI I
Sbjct: 184 GNLDEAQYLFSEIPGKDVISWNSMISGYAKAGNVGQACTLFQRMPERNLSSWNAMIAGFI 243
Query: 295 SACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIA 354
CG + AR F+ + +
Sbjct: 244 D---------------------------------------CGSLVSAREFFDTMPRRNCV 264
Query: 355 SWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMV--D 412
SW +IAG+ + G ++ AR+LF+ M +D+ S++AMI+ YAQN +P ALELF+ M+ D
Sbjct: 265 SWITMIAGYSKGGDVDSARKLFDQMDHKDLLSYNAMIACYAQNSKPKEALELFNDMLKQD 324
Query: 413 AGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINT 472
V P+++T+ SV A + G L+ W ++ + I L+D+L+ A+ID+YAKCGSI+
Sbjct: 325 IYVHPDKMTLASVISACSQLGDLEHWWWIESHMNDFGIVLDDHLATALIDLYAKCGSIDK 384
Query: 473 AFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTC 532
A+E+F+++R R + ++A+I G ++G A+ +K++ + I N +T+ G+L+
Sbjct: 385 AYELFHNLRKR--DLVAYSAMIYGCGINGKASDAIKLFEQMLAECIGPNLVTYTGLLTAY 442
Query: 533 CHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVI 592
HAGLV+ G + F SMK Y + P + HYG MVDL GRAG L++A ++I +MPM+ + +
Sbjct: 443 NHAGLVEKGYQCFNSMKD-YGLVPSIDHYGIMVDLFGRAGYLDEAYKLILNMPMQPNAGV 501
Query: 593 WGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMR 651
WG LL A R+H NVE+GE A + L+ LLS+IYA +W+DA +RK M
Sbjct: 502 WGALLLACRLHNNVELGEIAVQHCIKLETDTTGYCSLLSSIYATVEKWDDAKKLRKGME 560
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 126/483 (26%), Positives = 226/483 (46%), Gaps = 73/483 (15%)
Query: 25 ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSC 84
A+ SAL+ C+ + G IH + G + ++Q +L++LY+K G + A+ +FD
Sbjct: 106 AVSSALKSCARIHDMLCGMSIHGQVHVFGFNTCVYVQTALLDLYSKIGDMGTARKVFDEM 165
Query: 85 STLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFR 144
+ V+ N ++SGY++ L++A+ +F + P K +S+ SMI G+A+ +A +F+
Sbjct: 166 ANKSVVSWNSLLSGYVKAGNLDEAQYLFSEIPGKDVISWNSMISGYAKAGNVGQACTLFQ 225
Query: 145 DMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCS 204
M E L+S W MI GF+ C
Sbjct: 226 RMP-------ERNLSS-----------WNA----------MIAGFI-----------DCG 246
Query: 205 SLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQ 264
SLV AR FD M RN VSW M+ G++K G V+ AR+LF+++ KD++S+ MI Y Q
Sbjct: 247 SLVSAREFFDTMPRRNCVSWITMIAGYSKGGDVDSARKLFDQMDHKDLLSYNAMIACYAQ 306
Query: 265 VERLSEALTMYRAMLCDGI--APNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD 322
+ EAL ++ ML I P+ + + +ISAC + I S + G D
Sbjct: 307 NSKPKEALELFNDMLKQDIYVHPDKMTLASVISACSQLGDLEHWWWIESHMNDFGIVLDD 366
Query: 323 FIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKR 382
+ +I YA CG I+ A +LF+N++KR
Sbjct: 367 HLATALIDLYAKCGS-------------------------------IDKAYELFHNLRKR 395
Query: 383 DVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAH 442
D+ ++SAMI G N + + A++LF M+ + PN +T + A +G +++G
Sbjct: 396 DLVAYSAMIYGCGINGKASDAIKLFEQMLAECIGPNLVTYTGLLTAYNHAGLVEKGYQCF 455
Query: 443 EYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGD 502
+ + + + + ++D++ + G ++ A+++ ++ + + W A++ +H +
Sbjct: 456 NSMKDYGLVPSIDHYGIMVDLFGRAGYLDEAYKLILNMPMQPNA-GVWGALLLACRLHNN 514
Query: 503 ANL 505
L
Sbjct: 515 VEL 517
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 98/427 (22%), Positives = 201/427 (47%), Gaps = 23/427 (5%)
Query: 236 LVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLIS 295
+ A + + D SWG +I + Q +EA+++Y M + P + +
Sbjct: 53 MANYAYSMLHHLHIPDSFSWGCVIRFFSQKCLFTEAVSLYVQMHRTSLCPTSHAVSSALK 112
Query: 296 ACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIAS 355
+C R G+ IH + GF+ ++Q ++ Y+ G + AR F+ + S
Sbjct: 113 SCARIHDMLCGMSIHGQVHVFGFNTCVYVQTALLDLYSKIGDMGTARKVFDEMANKSVVS 172
Query: 356 WNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGV 415
WN+L++G+++ G +++A+ LF+ + +DV SW++MISGYA+ A LF M +
Sbjct: 173 WNSLLSGYVKAGNLDEAQYLFSEIPGKDVISWNSMISGYAKAGNVGQACTLFQRMPER-- 230
Query: 416 KPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLS-AAIIDMYAKCGSINTAF 474
N + ++ G+L R E+ +++ + +S +I Y+K G +++A
Sbjct: 231 --NLSSWNAMIAGFIDCGSLVSAR---EFF--DTMPRRNCVSWITMIAGYSKGGDVDSAR 283
Query: 475 EVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKL--NSITFIGVLSTC 532
++F + + + +NA+I A + L++++D+ K++I + + +T V+S C
Sbjct: 284 KLFDQMDHK--DLLSYNAMIACYAQNSKPKEALELFNDMLKQDIYVHPDKMTLASVISAC 341
Query: 533 CHAGLVDLGERYF-KSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVV 591
G DL ++ +S + + + D ++DL + G ++ A E+ ++ K D+V
Sbjct: 342 SQLG--DLEHWWWIESHMNDFGIVLDDHLATALIDLYAKCGSIDKAYELFHNL-RKRDLV 398
Query: 592 IWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNI---YADAGRWEDAFSIRK 648
+ ++ I+G + + + L GP+ V + + Y AG E +
Sbjct: 399 AYSAMIYGCGINGKASDAIKLFEQM--LAECIGPNLVTYTGLLTAYNHAGLVEKGYQCFN 456
Query: 649 EMRDCGM 655
M+D G+
Sbjct: 457 SMKDYGL 463
>gi|224129498|ref|XP_002320601.1| predicted protein [Populus trichocarpa]
gi|222861374|gb|EEE98916.1| predicted protein [Populus trichocarpa]
Length = 629
Score = 325 bits (832), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 169/438 (38%), Positives = 261/438 (59%), Gaps = 12/438 (2%)
Query: 237 VELARELFERIPSKDVVSWGTMIDGY--------LQVERLSEALTMYRAMLCDG-IAPND 287
++ AR+ F +I + SW T+I V L EAL + ML DG + PN
Sbjct: 65 IKYARKFFSQIHHPNCFSWNTIIRALADSDDDDLFHVNSL-EALLYFSHMLTDGLVEPNK 123
Query: 288 VMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQF-E 346
++ AC + EG Q+H +VK G +F+++ ++ Y CG + A + F +
Sbjct: 124 FTFPCVLKACAKLARIEEGKQLHGFVVKLGLVSDEFVRSNLVRVYVMCGAMKDAHVLFYQ 183
Query: 347 LGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALEL 406
++ ++ WN +I G++R G + +R+LF++M + V SW+ MISG AQN A+E+
Sbjct: 184 TRLEGNVVLWNVMIDGYVRMGDLRASRELFDSMPNKSVVSWNVMISGCAQNGHFKEAIEM 243
Query: 407 FHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAK 466
FH M V PN +T+VSV A++ G ++ G+W H + N I ++D L +A+IDMY+K
Sbjct: 244 FHDMQLGDVPPNYVTLVSVLPAVSRLGAIELGKWVHLFAEKNEIEIDDVLGSALIDMYSK 303
Query: 467 CGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFI 526
CGSI+ A +VF IR++ ++ W+AII GLAMHG A L + +++ + + + +I
Sbjct: 304 CGSIDKAVQVFEGIRNKKNPIT-WSAIIGGLAMHGRARDALDHFWRMQQAGVTPSDVVYI 362
Query: 527 GVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPM 586
GVLS C HAGLV+ G + M ++ + P ++HYGCMVDLLGRAG LE+AE++I +MP+
Sbjct: 363 GVLSACSHAGLVEEGRSIYYHMVNIVGLLPRIEHYGCMVDLLGRAGCLEEAEQLILNMPV 422
Query: 587 KADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSI 646
K D VI LL A ++HGN+E+GER AK L G P S V LSN++A G WE +
Sbjct: 423 KPDDVILKALLGACKMHGNIEMGERIAKILMGWYPHDSGSYVALSNMFASEGNWEGVVKV 482
Query: 647 RKEMRDCGMKRLPGFSGV 664
R +M++ +++ PG S +
Sbjct: 483 RLKMKELDIRKDPGCSWI 500
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 115/415 (27%), Positives = 195/415 (46%), Gaps = 47/415 (11%)
Query: 108 AREVFDKTPIKCCVSYTSMIMGFAQNDCWR-------EALEVFRDMRILGVI-PNEVTLA 159
AR+ F + C S+ ++I A +D EAL F M G++ PN+ T
Sbjct: 68 ARKFFSQIHHPNCFSWNTIIRALADSDDDDLFHVNSLEALLYFSHMLTDGLVEPNKFTFP 127
Query: 160 SVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMK-E 218
V+ + L I E + LHG V+KL + + +NL+ +Y +C ++ +A LF + + E
Sbjct: 128 CVLKACAKLARIEEGKQLHGFVVKLGLVSDEFVRSNLVRVYVMCGAMKDAHVLFYQTRLE 187
Query: 219 RNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAM 278
N+V WNVM++G+ + G + +RELF+ +P+K VVSW MI G Q EA+ M+ M
Sbjct: 188 GNVVLWNVMIDGYVRMGDLRASRELFDSMPNKSVVSWNVMISGCAQNGHFKEAIEMFHDM 247
Query: 279 LCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRI 338
+ PN V +V ++ A R A G +H K + D + + +I Y+ CG I
Sbjct: 248 QLGDVPPNYVTLVSVLPAVSRLGAIELGKWVHLFAEKNEIEIDDVLGSALIDMYSKCGSI 307
Query: 339 NLARLQFELGI--KDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQ 396
+ A FE GI K + +W+A+I G +G DA F MQ+
Sbjct: 308 DKAVQVFE-GIRNKKNPITWSAIIGGLAMHGRARDALDHFWRMQQ--------------- 351
Query: 397 NEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNL 456
AGV P+++ + V A + +G ++EGR + Y + N + L +
Sbjct: 352 ----------------AGVTPSDVVYIGVLSACSHAGLVEEGRSIY-YHMVNIVGLLPRI 394
Query: 457 S--AAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKI 509
++D+ + G + A ++ ++ + V A++ MHG+ + +I
Sbjct: 395 EHYGCMVDLLGRAGCLEEAEQLILNMPVKPDDVI-LKALLGACKMHGNIEMGERI 448
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 146/287 (50%), Gaps = 33/287 (11%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
L+ C+ + +G+Q+H + K GL S+ F++++L+ +Y CG + A +F
Sbjct: 130 LKACAKLARIEEGKQLHGFVVKLGLVSDEFVRSNLVRVYVMCGAMKDAHVLFYQTRLEGN 189
Query: 90 VAC-NIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRI 148
V N+MI GY+R L +RE+FD P K VS+ MI G AQN ++EA+E+F DM++
Sbjct: 190 VVLWNVMIDGYVRMGDLRASRELFDSMPNKSVVSWNVMISGCAQNGHFKEAIEMFHDMQL 249
Query: 149 LGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVE 208
V PN VTL SV+ + LG I + +H K I+ ++ + L++MY C S+ +
Sbjct: 250 GDVPPNYVTLVSVLPAVSRLGAIELGKWVHLFAEKNEIEIDDVLGSALIDMYSKCGSIDK 309
Query: 209 ARSLFDEMK-ERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVER 267
A +F+ ++ ++N ++W+ ++ G A G R
Sbjct: 310 AVQVFEGIRNKKNPITWSAIIGGLAMHG-------------------------------R 338
Query: 268 LSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIV 314
+AL + M G+ P+DV+ + ++SAC A EG I+ +V
Sbjct: 339 ARDALDHFWRMQQAGVTPSDVVYIGVLSACSHAGLVEEGRSIYYHMV 385
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 75/155 (48%), Gaps = 30/155 (19%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+ LVS L S A+ G+ +H K+ +E + + ++LI++Y+KCG I +A +F+
Sbjct: 257 VTLVSVLPAVSRLGAIELGKWVHLFAEKNEIEIDDVLGSALIDMYSKCGSIDKAVQVFEG 316
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
IRN K PI +++++I G A + R+AL+ F
Sbjct: 317 ----------------IRN----------KKNPI----TWSAIIGGLAMHGRARDALDHF 346
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLH 178
M+ GV P++V V+S+ H G + E R ++
Sbjct: 347 WRMQQAGVTPSDVVYIGVLSACSHAGLVEEGRSIY 381
>gi|302769798|ref|XP_002968318.1| hypothetical protein SELMODRAFT_599 [Selaginella moellendorffii]
gi|300163962|gb|EFJ30572.1| hypothetical protein SELMODRAFT_599 [Selaginella moellendorffii]
Length = 666
Score = 324 bits (831), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 190/637 (29%), Positives = 316/637 (49%), Gaps = 72/637 (11%)
Query: 9 VFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGL-ESNTFIQNSLINL 67
+F + + + + + V+ + C A+ G +I +L+ + GL +S+ + N+L+N+
Sbjct: 94 LFQAMQEDGRIEPDSVTFVAVVSACCDPSALEAGDKIFALVEERGLLDSDVVLGNALVNM 153
Query: 68 YAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMI 127
Y+KCG L A VF++ I+ VS+ ++I
Sbjct: 154 YSKCG-------------------------------SLKSATMVFERMKIRDVVSWNAII 182
Query: 128 MGFAQNDCWREALEVFRDMRILGVIPNE-------VTLASVISSSVHLGGIWECRMLHGL 180
A++D A++ FR+M++ G+ P E TLAS +++ + E R +H L
Sbjct: 183 SALARHDRKDIAMQRFREMQLEGLSPKEEALLPDGFTLASALAACTGPEMLEEGREIHAL 242
Query: 181 VIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELA 240
VI+ + +++ L++MY C +L + A
Sbjct: 243 VIERGCESELVVGNALVSMYANCGTLQD-------------------------------A 271
Query: 241 RELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRA 300
E F+++ ++VVSW MI Y+ EA ++ M +G+ PN V V +SAC
Sbjct: 272 LECFQKMAQRNVVSWNAMIAAYVHHNCDKEAFRIFHQMQLEGVQPNSVTFVTFLSACSTP 331
Query: 301 MAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALI 360
AF +GLQ+HSI+ ++G + + ++H +A C ++ A F+ + ++ SWN L+
Sbjct: 332 AAFEDGLQLHSIVRESGLEADASVGNAVVHMFAKCWSLDDALAAFQRIPQKNLGSWNGLL 391
Query: 361 AGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEI 420
+I G + +AR+LF M++RDV +W+ ++ Y + E A+ LF M+ G K N I
Sbjct: 392 GAYIHVGRLAEARKLFEVMEERDVITWNMILGAYVEREMAKEAVRLFRRMIAEGTKSNSI 451
Query: 421 TMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHI 480
T ++ A A L EGR HE + + A++DM+ KC S+ A + F I
Sbjct: 452 TWTTMLGACAGEALLAEGRRIHELIGERGADSELFVGNALVDMFGKCASLGGARQAFERI 511
Query: 481 RDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDL 540
R + S WN ++ LA +GDA LK + +++ IK +TFI V C HAG ++
Sbjct: 512 RGK--DASSWNVLVAALAQNGDAEEALKQFLQMQREGIKPTDVTFIVVFWACSHAGRLEQ 569
Query: 541 GERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAAS 600
+ F S++ Y + P HY M DLLGRAG L++AEEVI+ +P D + W TLL+A
Sbjct: 570 AKTIFASLRHDYGIAPLPSHYSGMTDLLGRAGFLDEAEEVIKRIPFSQDELPWMTLLSAC 629
Query: 601 RIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADA 637
++HG+VE G + A + P +RV LSNI+A A
Sbjct: 630 KVHGDVERGRKVAGQVLRWNPGDSAARVALSNIFAGA 666
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 163/681 (23%), Positives = 296/681 (43%), Gaps = 132/681 (19%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
++ ++AL+ C +++ G+ IH L+ +SGL + + N+L+N+Y KCG
Sbjct: 7 VSFITALKSCVRIQSLAAGKFIHLLVIESGLLTQISVGNALVNMYGKCG----------- 55
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
L AREVFD + +S+ ++I +AQ +EA+E+F
Sbjct: 56 --------------------SLALAREVFDGMDHRDVISWNAVITAYAQAGHCKEAMELF 95
Query: 144 RDMRILGVI-PNEVTLASVISSSVHLGGIWECRMLHGLVIKL-MIDGFVIISTNLLNMYC 201
+ M+ G I P+ VT +V+S+ + + LV + ++D V++ L+NMY
Sbjct: 96 QAMQEDGRIEPDSVTFVAVVSACCDPSALEAGDKIFALVEERGLLDSDVVLGNALVNMYS 155
Query: 202 VCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDG 261
C SL A +F+ MK R++VSWN +++ A+ ++A + F
Sbjct: 156 KCGSLKSATMVFERMKIRDVVSWNAIISALARHDRKDIAMQRFRE--------------- 200
Query: 262 YLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCY 321
+Q+E LS A+L DG + ++AC EG +IH+++++ G +
Sbjct: 201 -MQLEGLS---PKEEALLPDGFT-----LASALAACTGPEMLEEGREIHALVIERGCESE 251
Query: 322 DFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQK 381
+ ++ YA CG + A F+ + ++ SWNA+IA ++ + ++A ++F+ MQ
Sbjct: 252 LVVGNALVSMYANCGTLQDALECFQKMAQRNVVSWNAMIAAYVHHNCDKEAFRIFHQMQ- 310
Query: 382 RDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWA 441
LE GV+PN +T V+ A ++ ++G
Sbjct: 311 ----------------------LE--------GVQPNSVTFVTFLSACSTPAAFEDGLQL 340
Query: 442 HEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHG 501
H V + + + ++ A++ M+AKC S++ A F I + ++ WN ++ G
Sbjct: 341 HSIVRESGLEADASVGNAVVHMFAKCWSLDDALAAFQRIPQK--NLGSWNGLLGAYIHVG 398
Query: 502 DANLTLKIYSDLEKRNI-------------------------------KLNSITFIGVLS 530
K++ +E+R++ K NSIT+ +L
Sbjct: 399 RLAEARKLFEVMEERDVITWNMILGAYVEREMAKEAVRLFRRMIAEGTKSNSITWTTMLG 458
Query: 531 TCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADV 590
C L+ G R + + + +L +VD+ G+ L A + + K D
Sbjct: 459 ACAGEALLAEGRRIHELIGE-RGADSELFVGNALVDMFGKCASLGGARQAFERIRGK-DA 516
Query: 591 VIWGTLLAASRIHGNVEVGERAAKSLAGLQPSH-GPSRVLLSNIY---ADAGRWEDAFSI 646
W L+AA +G+ E A K +Q P+ V ++ + AGR E A +I
Sbjct: 517 SSWNVLVAALAQNGD---AEEALKQFLQMQREGIKPTDVTFIVVFWACSHAGRLEQAKTI 573
Query: 647 RKEMR-DCGMKRLPG-FSGVV 665
+R D G+ LP +SG+
Sbjct: 574 FASLRHDYGIAPLPSHYSGMT 594
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 115/453 (25%), Positives = 200/453 (44%), Gaps = 63/453 (13%)
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
G++P+ V+ + + S V + + + +H LVI+ + + + L+NMY C SL A
Sbjct: 1 GLLPDNVSFITALKSCVRIQSLAAGKFIHLLVIESGLLTQISVGNALVNMYGKCGSLALA 60
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLS 269
R +FD M R+++SWN ++ +A+AG
Sbjct: 61 REVFDGMDHRDVISWNAVITAYAQAG-------------------------------HCK 89
Query: 270 EALTMYRAMLCDG-IAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQA-T 327
EA+ +++AM DG I P+ V V ++SAC A G +I +++ + G D +
Sbjct: 90 EAMELFQAMQEDGRIEPDSVTFVAVVSACCDPSALEAGDKIFALVEERGLLDSDVVLGNA 149
Query: 328 IIHFYAACGRINLARLQFE-LGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYS 386
+++ Y+ CG + A + FE + I+D + SWNA+I+ R+ + A Q F MQ
Sbjct: 150 LVNMYSKCGSLKSATMVFERMKIRD-VVSWNAIISALARHDRKDIAMQRFREMQ------ 202
Query: 387 WSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVL 446
+ G + E+ + P+ T+ S A L+EGR H V+
Sbjct: 203 ----LEGLSPKEE--------------ALLPDGFTLASALAACTGPEMLEEGREIHALVI 244
Query: 447 NNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLT 506
+ A++ MYA CG++ A E F + R +V WNA+I H
Sbjct: 245 ERGCESELVVGNALVSMYANCGTLQDALECFQKMAQR--NVVSWNAMIAAYVHHNCDKEA 302
Query: 507 LKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVD 566
+I+ ++ ++ NS+TF+ LS C + G + S+ +E D +V
Sbjct: 303 FRIFHQMQLEGVQPNSVTFVTFLSACSTPAAFEDGLQ-LHSIVRESGLEADASVGNAVVH 361
Query: 567 LLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAA 599
+ + L+DA + +P K ++ W LL A
Sbjct: 362 MFAKCWSLDDALAAFQRIPQK-NLGSWNGLLGA 393
>gi|15226200|ref|NP_180329.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216862|sp|Q9ZUW3.1|PP172_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g27610
gi|3860271|gb|AAC73039.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|330252926|gb|AEC08020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 868
Score = 324 bits (831), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 198/627 (31%), Positives = 323/627 (51%), Gaps = 107/627 (17%)
Query: 41 QGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYI 100
+G Q+H+++ K+GL+ + NSLINLY KCG + +A
Sbjct: 212 RGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKA----------------------- 248
Query: 101 RNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLAS 160
R +FDKT +K V++ SMI G+A N EAL +F MR+ V +E + AS
Sbjct: 249 --------RILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFAS 300
Query: 161 VISSSVHLGGIWECRMLHGLVIKLMIDGFVI---ISTNLLNMYCVCSSLVEARSLFDEMK 217
VI +L + LH V+K GF+ I T L+ Y C+++++A LF E+
Sbjct: 301 VIKLCANLKELRFTEQLHCSVVKY---GFLFDQNIRTALMVAYSKCTAMLDALRLFKEI- 356
Query: 218 ERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRA 277
G V +VVSW MI G+LQ + EA+ ++
Sbjct: 357 -----------------GCV------------GNVVSWTAMISGFLQNDGKEEAVDLFSE 387
Query: 278 MLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGR 337
M G+ PN+ +++A + ++H+ +VK ++ +
Sbjct: 388 MKRKGVRPNEFTYSVILTA----LPVISPSEVHAQVVKTNYERSSTVG------------ 431
Query: 338 INLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQN 397
AL+ +++ G +E+A ++F+ + +D+ +WSAM++GYAQ
Sbjct: 432 -------------------TALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQT 472
Query: 398 EQPNMALELFHGMVDAGVKPNEITMVSVF--CAIASSGTLKEGRWAHEYVLNNSITLNDN 455
+ A+++F + G+KPNE T S+ CA A++ ++ +G+ H + + + + +
Sbjct: 473 GETEAAIKMFGELTKGGIKPNEFTFSSILNVCA-ATNASMGQGKQFHGFAIKSRLDSSLC 531
Query: 456 LSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEK 515
+S+A++ MYAK G+I +A EVF R R + WN++I G A HG A L ++ +++K
Sbjct: 532 VSSALLTMYAKKGNIESAEEVFK--RQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKK 589
Query: 516 RNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLE 575
R +K++ +TFIGV + C HAGLV+ GE+YF M + P +H CMVDL RAGQLE
Sbjct: 590 RKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLE 649
Query: 576 DAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYA 635
A +VI +MP A IW T+LAA R+H E+G AA+ + ++P + VLLSN+YA
Sbjct: 650 KAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYA 709
Query: 636 DAGRWEDAFSIRKEMRDCGMKRLPGFS 662
++G W++ +RK M + +K+ PG+S
Sbjct: 710 ESGDWQERAKVRKLMNERNVKKEPGYS 736
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 124/528 (23%), Positives = 234/528 (44%), Gaps = 71/528 (13%)
Query: 98 GYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVT 157
G + + RL +A +FDK+P + SY S++ GF+++ +EA +F ++ LG+ +
Sbjct: 36 GTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSI 95
Query: 158 LASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMK 217
+SV+ S L R LH IK V + T+L++ Y S+ + R +FDEMK
Sbjct: 96 FSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMK 155
Query: 218 ERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRA 277
ERN+V+W +++G+A+ +M D E LT++
Sbjct: 156 ERNVVTWTTLISGYAR----------------------NSMND---------EVLTLFMR 184
Query: 278 MLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGR 337
M +G PN + G GLQ+H+++VK G D + ++I+ Y CG
Sbjct: 185 MQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGN 244
Query: 338 INLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQN 397
+ AR+ F+ + +WN++I+G+ NG+ +
Sbjct: 245 VRKARILFDKTEVKSVVTWNSMISGYAANGLDLE-------------------------- 278
Query: 398 EQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLS 457
AL +F+ M V+ +E + SV A+ L+ H V+ + N+
Sbjct: 279 -----ALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIR 333
Query: 458 AAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRN 517
A++ Y+KC ++ A +F I +V W A+I G + + ++S+++++
Sbjct: 334 TALMVAYSKCTAMLDALRLFKEI-GCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKG 392
Query: 518 IKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDA 577
++ N T+ +L+ ++ E + + +K+ Y + ++D + G++E+A
Sbjct: 393 VRPNEFTYSVILTAL---PVISPSEVHAQVVKTNYERSSTVGT--ALLDAYVKLGKVEEA 447
Query: 578 EEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSL--AGLQPSH 623
+V + K D+V W +LA G E + L G++P+
Sbjct: 448 AKVFSGIDDK-DIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNE 494
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 108/486 (22%), Positives = 202/486 (41%), Gaps = 101/486 (20%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E + S ++ C+ + +Q+H + K G + I+ +L+ Y+KC + A +F
Sbjct: 295 ESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFK 354
Query: 83 SCSTL-DPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALE 141
+ + V+ MISG++ QND EA++
Sbjct: 355 EIGCVGNVVSWTAMISGFL-------------------------------QNDGKEEAVD 383
Query: 142 VFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYC 201
+F +M+ GV PNE T SVI +++ + E +H V+K + + T LL+ Y
Sbjct: 384 LFSEMKRKGVRPNEFTY-SVILTALPVISPSE---VHAQVVKTNYERSSTVGTALLDAYV 439
Query: 202 VCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDG 261
+ EA +F + +++IV+W+ ML G+A+ G E A ++F G + G
Sbjct: 440 KLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMF-----------GELTKG 488
Query: 262 YLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMA-FGEGLQIHSIIVKAGFDC 320
GI PN+ +++ C A G+G Q H +K+ D
Sbjct: 489 --------------------GIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDS 528
Query: 321 YDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ 380
+ + ++ YA G I A F+ + + SWN++I+G+ ++G A +F M+
Sbjct: 529 SLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMK 588
Query: 381 KRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRW 440
KR VK + +T + VF A +G ++EG
Sbjct: 589 KRK-------------------------------VKMDGVTFIGVFAACTHAGLVEEGEK 617
Query: 441 AHEYVLNN-SITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAM 499
+ ++ + I ++ ++D+Y++ G + A +V ++ + S + W I+ +
Sbjct: 618 YFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGS-TIWRTILAACRV 676
Query: 500 HGDANL 505
H L
Sbjct: 677 HKKTEL 682
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 114/512 (22%), Positives = 218/512 (42%), Gaps = 103/512 (20%)
Query: 37 IAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMI 96
+ V ++H+ + K+ E ++ + +L++ Y K G + +A +F D VA + M+
Sbjct: 407 LPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAML 466
Query: 97 SGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEV 156
+GY AQ A+++F ++ G+ PNE
Sbjct: 467 AGY-------------------------------AQTGETEAAIKMFGELTKGGIKPNEF 495
Query: 157 TLASVIS-SSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDE 215
T +S+++ + + + + HG IK +D + +S+ LL MY ++ A +F
Sbjct: 496 TFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKR 555
Query: 216 MKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYL----QVERLSEA 271
+E+++VSWN M++G+A+ G A ++F+ + + V G G + E
Sbjct: 556 QREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEG 615
Query: 272 LTMYRAMLCD-GIAP---NDVMIVDLISACG---RAMAFGEGLQIHSIIVKAGFDCYDFI 324
+ M+ D IAP ++ +VDL S G +AM I ++ AG + I
Sbjct: 616 EKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKV-----IENMPNPAGSTIWRTI 670
Query: 325 QATI-IHFYAACGRINLARLQFELGIKDHIASWNALIAG-FIRNGMIED---ARQLFN-- 377
A +H GR+ ++ + +K ++ L++ + +G ++ R+L N
Sbjct: 671 LAACRVHKKTELGRLAAEKI---IAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNER 727
Query: 378 NMQKRDVYSW-------SAMISG---YAQNEQPNMALE-LFHGMVDAGVKPNEITMVSVF 426
N++K YSW + ++G + +Q M LE L + D G +P+
Sbjct: 728 NVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTRLKDLGYEPDT------- 780
Query: 427 CAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTS 486
YVL + ++D A++ +++ +I AF + T
Sbjct: 781 ----------------SYVLQD---IDDEHKEAVLAQHSERLAI--AFGLI-----ATPK 814
Query: 487 VSPWNAIICGLAMHGDANLTLKIYSDLEKRNI 518
SP II L + GD +L +K+ + +E+R I
Sbjct: 815 GSPL-LIIKNLRVCGDCHLVIKLIAKIEEREI 845
>gi|359488315|ref|XP_002278668.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Vitis vinifera]
Length = 877
Score = 324 bits (831), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 199/650 (30%), Positives = 324/650 (49%), Gaps = 97/650 (14%)
Query: 13 QKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCG 72
QKA + S A S R C+ A+ G Q+H K+ ++ I + +++Y KC
Sbjct: 267 QKAGVGVSQSTFA--SVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKC- 323
Query: 73 LISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQ 132
+ L+DA+++F+ P SY ++I+G+A+
Sbjct: 324 ------------------------------NNLSDAQKLFNSLPNHNLQSYNAIIVGYAR 353
Query: 133 NDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVII 192
+D EAL +FR ++ G+ +EV+L+ + + G E +HGL +K + + +
Sbjct: 354 SDKGIEALGMFRLLQKSGLGLDEVSLSGAFRACAVIKGDLEGLQVHGLSMKSLCQSNICV 413
Query: 193 STNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDV 252
+ +L+MY C +LVE A LV FE + S+D
Sbjct: 414 ANAILDMYGKCGALVE-------------------------ACLV------FEEMVSRDA 442
Query: 253 VSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSI 312
VSW +I + Q + L+++ ML G+ P++ ++ AC A G++IH+
Sbjct: 443 VSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNR 502
Query: 313 IVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDA 372
I+K+ F+ +I Y+ CG M+E A
Sbjct: 503 IIKSRLGLDSFVGIALIDMYSKCG-------------------------------MMEKA 531
Query: 373 RQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASS 432
+L + + ++ V SW+A+ISG++ +Q A + F M++ GV P+ T ++ A+
Sbjct: 532 EKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANL 591
Query: 433 GTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNA 492
T++ G+ H ++ + + +S+ ++DMY+KCG++ +F +R WNA
Sbjct: 592 VTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNR--DFVTWNA 649
Query: 493 IICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVY 552
++CG A HG LKI+ ++ N+K N TF+ VL C H GLV+ G YF SM S Y
Sbjct: 650 MVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNY 709
Query: 553 NVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERA 612
++P L+HY C+VD++GR+GQ+ A E+I MP +AD VIW TLL+ +IHGNVEV E+A
Sbjct: 710 GLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSICKIHGNVEVAEKA 769
Query: 613 AKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
A S+ L+P + VLLSNIYA+AG W + +RK MR G+K+ PG S
Sbjct: 770 AYSILQLEPEDSAAYVLLSNIYANAGMWNEVTKLRKMMRFNGLKKEPGCS 819
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 171/673 (25%), Positives = 287/673 (42%), Gaps = 121/673 (17%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
+ CS A+ G+Q H+ + + + F+ N LI +Y KC + A +FD D
Sbjct: 49 FQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFDGMPQRDT 108
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
V+ N M+ GY + A+++FD P + VS+ S+I G+ N R+ ++VF M +
Sbjct: 109 VSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFLQMGRM 168
Query: 150 GVIPNEVTLASVISSSV----HLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSS 205
G + + T A V+ S H GGI +HGL +K+ D V+ + LL+MY C
Sbjct: 169 GTVFDRTTFAVVLKSCSSLEDHGGGI----QIHGLAVKMGFDCDVVTGSALLDMYAKCKK 224
Query: 206 LVEARSLFDEMKERNIVSWNVMLNGFAK----AGLVELARELFE---------------- 245
L + F M E+N VSW+ ++ G + G +EL +E+ +
Sbjct: 225 LDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFRS 284
Query: 246 -------RIPSK------------DVVSWGTMIDGYLQVERLSE---------------- 270
R+ S+ DVV +D Y++ LS+
Sbjct: 285 CAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQSY 344
Query: 271 ---------------ALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVK 315
AL M+R + G+ ++V + AC EGLQ+H + +K
Sbjct: 345 NAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAFRACAVIKGDLEGLQVHGLSMK 404
Query: 316 AGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQL 375
+ + I+ Y CG + A L FE + SWNA+IA +NG
Sbjct: 405 SLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNG-------- 456
Query: 376 FNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTL 435
NE+ L LF M+ +G++P+E T SV A A L
Sbjct: 457 ---------------------NEEKT--LSLFVWMLQSGMEPDEFTYGSVLKACAGWQAL 493
Query: 436 KEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIIC 495
G H ++ + + L+ + A+IDMY+KCG + A ++ H R +V WNAII
Sbjct: 494 NCGMEIHNRIIKSRLGLDSFVGIALIDMYSKCGMMEKAEKL--HDRLAEQTVVSWNAIIS 551
Query: 496 GLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVE 555
G ++ + K +S + + + ++ T+ +L TC + V+LG++ + ++
Sbjct: 552 GFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIK-KELQ 610
Query: 556 PDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAK- 614
D +VD+ + G ++D + + P + D V W ++ HG +GE A K
Sbjct: 611 SDAYISSTLVDMYSKCGNMQDFQLIFEKAPNR-DFVTWNAMVCGYAQHG---LGEEALKI 666
Query: 615 ----SLAGLQPSH 623
L ++P+H
Sbjct: 667 FEYMQLENVKPNH 679
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 136/294 (46%), Gaps = 5/294 (1%)
Query: 293 LISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDH 352
+ C A G Q H+ ++ F F+ +I Y C + A F+ +
Sbjct: 48 IFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFDGMPQRD 107
Query: 353 IASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVD 412
SWNA++ G+ G I A++LF+ M +RDV SW+++ISGY N +++F M
Sbjct: 108 TVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFLQMGR 167
Query: 413 AGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINT 472
G + T V + +S G H + + +A++DMYAKC ++
Sbjct: 168 MGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCKKLDC 227
Query: 473 AFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTC 532
+ + F+H VS W+AII G + D L+++ +++K + ++ TF V +C
Sbjct: 228 SIQ-FFHSMPEKNWVS-WSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFRSC 285
Query: 533 CHAGLVDLGER-YFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMP 585
+ LG + + ++K+ + D+ +D+ + L DA+++ S+P
Sbjct: 286 AGLSALRLGSQLHGHALKTDFGT--DVVIGTATLDMYMKCNNLSDAQKLFNSLP 337
Score = 46.6 bits (109), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 54/120 (45%), Gaps = 2/120 (1%)
Query: 421 TMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHI 480
T +F + L G+ AH ++ ++ +I MY KC + AF+VF +
Sbjct: 44 TFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFDGM 103
Query: 481 RDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDL 540
R T WNA++ G A GD + K++ + +R++ + G L H ++D+
Sbjct: 104 PQRDT--VSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDV 161
>gi|297846530|ref|XP_002891146.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336988|gb|EFH67405.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 554
Score = 324 bits (831), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 169/543 (31%), Positives = 301/543 (55%), Gaps = 38/543 (6%)
Query: 126 MIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLM 185
M+ A++ + + L +F ++R G+ P+ TL V+ S L + E +HG +K
Sbjct: 1 MLKSLAESKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGYAVKTG 60
Query: 186 IDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFE 245
++ + +L+ MY A G +E+ ++F+
Sbjct: 61 LESDSYVCNSLMGMY-------------------------------AALGKMEITHKVFD 89
Query: 246 RIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDG-IAPNDVMIVDLISACGRAMAFG 304
+P +DVVSW +I Y+ R +A+++++ M + + ++ IV +SAC
Sbjct: 90 EMPERDVVSWNGLISSYVGHGRFEDAISVFQRMSRESNLKADEGTIVSTLSACSVLKNLE 149
Query: 305 EGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFI 364
G +I+ +V F+ ++ + CG ++ AR F+ ++ W ++++G++
Sbjct: 150 IGERIYRYVVTE-FEMSVRTGNALVDMFCKCGCLDKARAIFDSMRDKNVKCWTSMVSGYV 208
Query: 365 RNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVS 424
NG ++AR+LF +DV W+AM++GY Q + + ALELF M A ++P+ +VS
Sbjct: 209 SNGRTDEARELFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTARIRPDNFVLVS 268
Query: 425 VFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRT 484
+ A +G L++G+W H Y+ N +T++ + A++DMYAKCG I TA VFY +++R
Sbjct: 269 LLTGCAQTGALEQGKWIHGYIRENRVTVDKVVGTALVDMYAKCGCIETALGVFYEMKERD 328
Query: 485 TSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERY 544
T + W ++I GLA +G + L +Y ++E ++L+ ITF+ VL+ C H G V G R
Sbjct: 329 T--ASWTSLIYGLATNGMSGRALDLYYEMENVGVRLDDITFVAVLTACSHGGFVAEGRRI 386
Query: 545 FKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKAD---VVIWGTLLAASR 601
F SM + ++P +HY C++DLL RAG L++AEE+I M + D V ++ +LL+A+R
Sbjct: 387 FYSMTERHKIQPKSEHYSCLIDLLCRAGLLDEAEELIDKMHGERDKTLVPVYCSLLSAAR 446
Query: 602 IHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGF 661
+GNV++ ER A+ L ++ S + LL+++YA A RWED ++R++M+D G+++ PG
Sbjct: 447 NYGNVKIAERVAEKLEKVEVSDSSAHTLLASVYASANRWEDVTNVRRKMKDLGIRKFPGC 506
Query: 662 SGV 664
S +
Sbjct: 507 SSI 509
Score = 182 bits (461), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 131/498 (26%), Positives = 231/498 (46%), Gaps = 87/498 (17%)
Query: 39 VSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISG 98
V +G+++H K+GLES++++ NSL+ +YA G
Sbjct: 46 VIEGEKVHGYAVKTGLESDSYVCNSLMGMYAALG-------------------------- 79
Query: 99 YIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDM-RILGVIPNEVT 157
++ +VFD+ P + VS+ +I + + + +A+ VF+ M R + +E T
Sbjct: 80 -----KMEITHKVFDEMPERDVVSWNGLISSYVGHGRFEDAISVFQRMSRESNLKADEGT 134
Query: 158 LASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIIS--------TNLLNMYCVCSSLVEA 209
+ S +S+ C +L L I I +V+ L++M+C C L +A
Sbjct: 135 IVSTLSA---------CSVLKNLEIGERIYRYVVTEFEMSVRTGNALVDMFCKCGCLDKA 185
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLS 269
R++FD M+++N+ W M++G+ G + ARELFER P KDVV W M++GY+Q R
Sbjct: 186 RAIFDSMRDKNVKCWTSMVSGYVSNGRTDEARELFERSPVKDVVLWTAMMNGYVQFNRFD 245
Query: 270 EALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATII 329
EAL ++R M I P++ ++V L++ C + A +G IH I + + ++
Sbjct: 246 EALELFRCMQTARIRPDNFVLVSLLTGCAQTGALEQGKWIHGYIRENRVTVDKVVGTALV 305
Query: 330 HFYAACGRINLA-RLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWS 388
YA CG I A + +E+ +D ASW +LI G NGM
Sbjct: 306 DMYAKCGCIETALGVFYEMKERD-TASWTSLIYGLATNGM-------------------- 344
Query: 389 AMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWA-HEYVLN 447
AL+L++ M + GV+ ++IT V+V A + G + EGR +
Sbjct: 345 -----------SGRALDLYYEMENVGVRLDDITFVAVLTACSHGGFVAEGRRIFYSMTER 393
Query: 448 NSITLNDNLSAAIIDMYAKCGSINTAFEVFYHI---RDRTTSVSPWNAIICGLAMHGDAN 504
+ I + +ID+ + G ++ A E+ + RD+T V + +++ +G+
Sbjct: 394 HKIQPKSEHYSCLIDLLCRAGLLDEAEELIDKMHGERDKTL-VPVYCSLLSAARNYGNVK 452
Query: 505 LTLKIYSDLEKRNIKLNS 522
+ ++ LEK + +S
Sbjct: 453 IAERVAEKLEKVEVSDSS 470
Score = 135 bits (340), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 96/379 (25%), Positives = 180/379 (47%), Gaps = 67/379 (17%)
Query: 8 SVFN--SQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLI 65
SVF S+++NL+ E +VS L CS + G++I+ + + E + N+L+
Sbjct: 117 SVFQRMSRESNLKAD--EGTIVSTLSACSVLKNLEIGERIYRYVV-TEFEMSVRTGNALV 173
Query: 66 NLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTS 125
+++ KCG + +A+++FDS + M+SGY+ N R ++ARE+F+++P+K V +T+
Sbjct: 174 DMFCKCGCLDKARAIFDSMRDKNVKCWTSMVSGYVSNGRTDEARELFERSPVKDVVLWTA 233
Query: 126 MIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLM 185
M+ G+ Q + + EALE+FR M+ + P+ L S+++ G + + + +HG + +
Sbjct: 234 MMNGYVQFNRFDEALELFRCMQTARIRPDNFVLVSLLTGCAQTGALEQGKWIHGYIRENR 293
Query: 186 IDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFE 245
+ ++ T L++MY C + A +F EMKER+ SW ++ G A G+
Sbjct: 294 VTVDKVVGTALVDMYAKCGCIETALGVFYEMKERDTASWTSLIYGLATNGMS-------- 345
Query: 246 RIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGE 305
G +D Y ++E + G+ +D+ V +++AC E
Sbjct: 346 ----------GRALDLYYEMENV-------------GVRLDDITFVAVLTACSHGGFVAE 382
Query: 306 GLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIR 365
G +I FY+ R I+ ++ LI R
Sbjct: 383 GRRI---------------------FYSMTERHK---------IQPKSEHYSCLIDLLCR 412
Query: 366 NGMIEDARQLFNNMQ-KRD 383
G++++A +L + M +RD
Sbjct: 413 AGLLDEAEELIDKMHGERD 431
Score = 40.4 bits (93), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 65/137 (47%), Gaps = 8/137 (5%)
Query: 23 ELALVSALRYCSAHIAVSQGQQI-HSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMF 81
++ V+ L CS V++G++I +S+ + ++ + + LI+L + GL+ +A+ +
Sbjct: 364 DITFVAVLTACSHGGFVAEGRRIFYSMTERHKIQPKSEHYSCLIDLLCRAGLLDEAEELI 423
Query: 82 DSC-----STLDPVACNIMISG--YIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQND 134
D TL PV C+++ + Y E +K + ++T + +A +
Sbjct: 424 DKMHGERDKTLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVSDSSAHTLLASVYASAN 483
Query: 135 CWREALEVFRDMRILGV 151
W + V R M+ LG+
Sbjct: 484 RWEDVTNVRRKMKDLGI 500
>gi|414879990|tpg|DAA57121.1| TPA: putative NAC domain and pentatricopeptide repeat containing
protein [Zea mays]
Length = 1467
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 190/610 (31%), Positives = 307/610 (50%), Gaps = 63/610 (10%)
Query: 43 QQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRN 102
+++H+ + SGL + + + +I LYA +
Sbjct: 858 KKLHAHLVVSGLHNCQYAMSKVIRLYA------------------------------LHQ 887
Query: 103 DRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVI 162
L A +VF + + +++ G AQ+D ++A+ ++ + G+ P+ +T V+
Sbjct: 888 SDLVSAHKVFKQIESPTTFLWNTLLRGLAQSDAPKDAIVFYKKAQEKGMKPDNLTFPFVL 947
Query: 163 SSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIV 222
+ E +H VIKL + +S +L+ +Y C +L ARS+F+EM +++V
Sbjct: 948 KACAKTCAPKEGEQMHNHVIKLGFLLDIFVSNSLIYLYAACGALACARSVFNEMLVKDVV 1007
Query: 223 SWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDG 282
SWN ++I GY Q RL E LT+++ M +
Sbjct: 1008 SWN-------------------------------SLIGGYSQHNRLKEVLTLFKLMQAEE 1036
Query: 283 IAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLAR 342
+ + V +V +ISAC + + I + ++ T+I +Y G++ A
Sbjct: 1037 VQADKVTMVKVISACTHLGDWSMADCMVRYIEHNHIEVDVYLGNTLIDYYCRIGQLQSAE 1096
Query: 343 LQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNM 402
F + + NA+I + + G + A+++F+ + +D+ SWS+MI Y+Q +
Sbjct: 1097 KVFSQMKDKNTVTLNAMITAYAKGGNLVSAKKIFDQIPNKDLISWSSMICAYSQASHFSD 1156
Query: 403 ALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIID 462
+LELF M A VKP+ + + SV A A G L G+W H+YV N+I + + ++ID
Sbjct: 1157 SLELFRQMQRAKVKPDAVVIASVLSACAHLGALDLGKWIHDYVRRNNIKADTIMENSLID 1216
Query: 463 MYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNS 522
M+AKCG + A +VF + ++ T WN+II GLA +G + L I+ + + N
Sbjct: 1217 MFAKCGCVQEALQVFTDMEEKDT--LSWNSIILGLANNGFEDEALDIFHSMLTEGPRPNE 1274
Query: 523 ITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIR 582
+TF+GVL C + LV+ G +F+ MKSV+N+EP +KHYGC+VD+L RAGQLE A I
Sbjct: 1275 VTFLGVLIACANRQLVEEGLDHFERMKSVHNLEPQMKHYGCVVDILSRAGQLEKAVSFIS 1334
Query: 583 SMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWED 642
MP+ D V+W LL A R HGNV V E A K L+ L P + +LLSNIYA A RW D
Sbjct: 1335 EMPLAPDPVVWRILLGACRTHGNVAVAEMATKKLSELDPGNSADSMLLSNIYASADRWSD 1394
Query: 643 AFSIRKEMRD 652
A ++R+ D
Sbjct: 1395 AMNVRRWTAD 1404
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 138/409 (33%), Positives = 232/409 (56%), Gaps = 6/409 (1%)
Query: 240 ARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGR 299
A ++F++ P+ W + Y EAL +++ +A + + ++ AC
Sbjct: 437 ALKVFDQSPA----PWRAFLKAYSHGPFPLEALHLFKHAR-QHLADDTFVFTFVLKACAG 491
Query: 300 AMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNAL 359
G Q+H+++V+ GF+ + ++ +I+ Y + AR F+ ++ SWN +
Sbjct: 492 LGWHRAGAQLHALVVQKGFEFHAYVHTALINVYVMSRCLVEARKVFDEMPVKNVVSWNVM 551
Query: 360 IAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNE 419
I GF G +E AR LF+ M R+V SW+ +I GY + AL L M+ G+ P+E
Sbjct: 552 ITGFAGWGEVEYARLLFDQMPCRNVVSWTGLIDGYTRACLYAEALTLLRHMMAGGISPSE 611
Query: 420 ITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYH 479
IT+++V AI++ G + G + Y I + + ++ID+YAK GS+ + +VF
Sbjct: 612 ITVLAVIPAISNLGGILMGEMLNGYCEKKGIMSDARVGNSLIDLYAKIGSVQNSLKVFDE 671
Query: 480 IRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVD 539
+ DR VS W +II G AMHG + L++++++ + IK N ITF+ V++ C H GLV+
Sbjct: 672 MLDRRNLVS-WTSIISGFAMHGLSVEALELFAEMRRAGIKPNRITFLSVINACSHGGLVE 730
Query: 540 LGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAA 599
G +FKSM YN++P++KH+GC++D+LGRAG+L +AE++I +PM+ +V +W LL
Sbjct: 731 QGLAFFKSMVYEYNIDPEIKHFGCIIDMLGRAGRLCEAEQIIEGLPMEVNVTVWRILLGC 790
Query: 600 SRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRK 648
+G V +GERA K ++ L+ G +LSN+ + GR+ DA RK
Sbjct: 791 CSKYGEVAMGERAIKMISDLERESGGDFAVLSNVLTELGRFSDAEQARK 839
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 133/516 (25%), Positives = 239/516 (46%), Gaps = 79/516 (15%)
Query: 11 NSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAK 70
+Q+ ++ + V L+ C+ A +G+Q+H+ + K G + F+ NSLI LYA
Sbjct: 930 KAQEKGMKPDNLTFPFV--LKACAKTCAPKEGEQMHNHVIKLGFLLDIFVSNSLIYLYAA 987
Query: 71 CGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGF 130
CG + AC AR VF++ +K VS+ S+I G+
Sbjct: 988 CGAL----------------AC---------------ARSVFNEMLVKDVVSWNSLIGGY 1016
Query: 131 AQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLG--GIWECRMLHGLVIKLMIDG 188
+Q++ +E L +F+ M+ V ++VT+ VIS+ HLG + +C + + + +D
Sbjct: 1017 SQHNRLKEVLTLFKLMQAEEVQADKVTMVKVISACTHLGDWSMADCMVRYIEHNHIEVD- 1075
Query: 189 FVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIP 248
V + L++ YC L A +F +MK++N V+ N M+ +AK G + A+++F++IP
Sbjct: 1076 -VYLGNTLIDYYCRIGQLQSAEKVFSQMKDKNTVTLNAMITAYAKGGNLVSAKKIFDQIP 1134
Query: 249 SKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQ 308
+KD++SW +MI Y Q S++L ++R M + P+ V+I ++SAC A G
Sbjct: 1135 NKDLISWSSMICAYSQASHFSDSLELFRQMQRAKVKPDAVVIASVLSACAHLGALDLGKW 1194
Query: 309 IHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGM 368
IH + + ++ ++I +A CG + A F + SWN++I G NG
Sbjct: 1195 IHDYVRRNNIKADTIMENSLIDMFAKCGCVQEALQVFTDMEEKDTLSWNSIILGLANNGF 1254
Query: 369 IEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCA 428
++ AL++FH M+ G +PNE+T + V A
Sbjct: 1255 EDE-------------------------------ALDIFHSMLTEGPRPNEVTFLGVLIA 1283
Query: 429 IASSGTLKEGRWAHEYVLNNSITLNDNLS--AAIIDMYAKCGSINTAFEVFYHIRDRTTS 486
A+ ++EG H + + L + ++D+ ++ G + A I + +
Sbjct: 1284 CANRQLVEEG-LDHFERMKSVHNLEPQMKHYGCVVDILSRAGQLEKAVSF---ISEMPLA 1339
Query: 487 VSP--WNAIICGLAMHGD---ANLTLKIYSDLEKRN 517
P W ++ HG+ A + K S+L+ N
Sbjct: 1340 PDPVVWRILLGACRTHGNVAVAEMATKKLSELDPGN 1375
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 126/466 (27%), Positives = 221/466 (47%), Gaps = 62/466 (13%)
Query: 108 AREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVH 167
A +VFD++P + + + ++ EAL +F+ R + + V+ +
Sbjct: 437 ALKVFDQSP----APWRAFLKAYSHGPFPLEALHLFKHAR-QHLADDTFVFTFVLKACAG 491
Query: 168 LGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVM 227
LG LH LV++ + + T L+N+Y + LVEAR +FDEM +N+VSWNVM
Sbjct: 492 LGWHRAGAQLHALVVQKGFEFHAYVHTALINVYVMSRCLVEARKVFDEMPVKNVVSWNVM 551
Query: 228 LNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPND 287
+ GFA G VE AR LF+++P ++VVSW +IDGY + +EALT+ R M+ GI+P++
Sbjct: 552 ITGFAGWGEVEYARLLFDQMPCRNVVSWTGLIDGYTRACLYAEALTLLRHMMAGGISPSE 611
Query: 288 VMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRI-NLARLQFE 346
+ ++ +I A G ++ K G + ++I YA G + N ++ E
Sbjct: 612 ITVLAVIPAISNLGGILMGEMLNGYCEKKGIMSDARVGNSLIDLYAKIGSVQNSLKVFDE 671
Query: 347 LGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALEL 406
+ + ++ SW ++I+GF +G+ + ALEL
Sbjct: 672 MLDRRNLVSWTSIISGFAMHGLSVE-------------------------------ALEL 700
Query: 407 FHGMVDAGVKPNEITMVSVFCAIASSGTLKEG-----RWAHEYVLNNSITLNDNLSAAII 461
F M AG+KPN IT +SV A + G +++G +EY ++ I II
Sbjct: 701 FAEMRRAGIKPNRITFLSVINACSHGGLVEQGLAFFKSMVYEYNIDPEI----KHFGCII 756
Query: 462 DMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANL---TLKIYSDLEKRN- 517
DM + G + A ++ + +V+ W ++ + +G+ + +K+ SDLE+ +
Sbjct: 757 DMLGRAGRLCEAEQIIEGL-PMEVNVTVWRILLGCCSKYGEVAMGERAIKMISDLERESG 815
Query: 518 ----IKLNSITFIGVLSTCCHA-------GLVDLGERYFKSMKSVY 552
+ N +T +G S A +V L E +++K ++
Sbjct: 816 GDFAVLSNVLTELGRFSDAEQARKLLDQRKIVKLQEAVMEAVKKLH 861
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 152/616 (24%), Positives = 270/616 (43%), Gaps = 63/616 (10%)
Query: 2 PLDHFHSVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQ 61
PL+ H +F + +L + + V L+ C+ G Q+H+L+ + G E + ++
Sbjct: 461 PLEALH-LFKHARQHLADDTFVFTFV--LKACAGLGWHRAGAQLHALVVQKGFEFHAYVH 517
Query: 62 NSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCV 121
+LIN+Y + +A+ +FD + V+ N+MI+G+ + AR +FD+ P + V
Sbjct: 518 TALINVYVMSRCLVEARKVFDEMPVKNVVSWNVMITGFAGWGEVEYARLLFDQMPCRNVV 577
Query: 122 SYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLV 181
S+T +I G+ + + EAL + R M G+ P+E+T+ +VI + +LGGI ML+G
Sbjct: 578 SWTGLIDGYTRACLYAEALTLLRHMMAGGISPSEITVLAVIPAISNLGGILMGEMLNGYC 637
Query: 182 IKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEM-KERNIVSWNVMLNGFAKAGLVELA 240
K I + +L+++Y S+ + +FDEM RN+VSW +++GFA GL A
Sbjct: 638 EKKGIMSDARVGNSLIDLYAKIGSVQNSLKVFDEMLDRRNLVSWTSIISGFAMHGLSVEA 697
Query: 241 RELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRA 300
ELF M RA GI PN + + +I+AC
Sbjct: 698 LELFAE---------------------------MRRA----GIKPNRITFLSVINACSHG 726
Query: 301 MAFGEGLQ-IHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFE-LGIKDHIASWNA 358
+GL S++ + D II GR+ A E L ++ ++ W
Sbjct: 727 GLVEQGLAFFKSMVYEYNIDPEIKHFGCIIDMLGRAGRLCEAEQIIEGLPMEVNVTVWRI 786
Query: 359 LIAGFIRNG---MIEDARQLFNNMQKR---DVYSWSAMISGYAQNEQPNMALELFHGMVD 412
L+ + G M E A ++ +++++ D S +++ + A +L
Sbjct: 787 LLGCCSKYGEVAMGERAIKMISDLERESGGDFAVLSNVLTELGRFSDAEQARKLLDQR-- 844
Query: 413 AGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGS-IN 471
VK E M +V + H +++ + + + +I +YA S +
Sbjct: 845 KIVKLQEAVMEAV-------------KKLHAHLVVSGLHNCQYAMSKVIRLYALHQSDLV 891
Query: 472 TAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLST 531
+A +VF I TT + WN ++ GLA + Y +++ +K +++TF VL
Sbjct: 892 SAHKVFKQIESPTTFL--WNTLLRGLAQSDAPKDAIVFYKKAQEKGMKPDNLTFPFVLKA 949
Query: 532 CCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVV 591
C GE+ + + D+ ++ L G L A V M +K DVV
Sbjct: 950 CAKTCAPKEGEQMHNHVIKL-GFLLDIFVSNSLIYLYAACGALACARSVFNEMLVK-DVV 1007
Query: 592 IWGTLLAASRIHGNVE 607
W +L+ H ++
Sbjct: 1008 SWNSLIGGYSQHNRLK 1023
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 138/582 (23%), Positives = 268/582 (46%), Gaps = 76/582 (13%)
Query: 51 KSGLESNTFIQNSLINLYAKCGLISQAKSMFDSC---STLDP----VACNIMISGYIRND 103
++G++ N S+IN + GL+ Q + F S +DP C I + G R
Sbjct: 706 RAGIKPNRITFLSVINACSHGGLVEQGLAFFKSMVYEYNIDPEIKHFGCIIDMLG--RAG 763
Query: 104 RLNDAREVFDKTPIK-----------CCVSYTSMIMGFAQNDCWREALEVFRDMRI---- 148
RL +A ++ + P++ CC Y + MG A+++ D+
Sbjct: 764 RLCEAEQIIEGLPMEVNVTVWRILLGCCSKYGEVAMG-------ERAIKMISDLERESGG 816
Query: 149 -LGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLV 207
V+ N +T S + + + R ++KL V+ + L+ + V S L
Sbjct: 817 DFAVLSNVLTELGRFSDAEQARKLLDQRK----IVKL--QEAVMEAVKKLHAHLVVSGLH 870
Query: 208 EARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVER 267
+ ++ + L ++ LV A ++F++I S W T++ G Q +
Sbjct: 871 NCQYAMSKV---------IRLYALHQSDLVS-AHKVFKQIESPTTFLWNTLLRGLAQSDA 920
Query: 268 LSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQAT 327
+A+ Y+ G+ P+++ ++ AC + A EG Q+H+ ++K GF F+ +
Sbjct: 921 PKDAIVFYKKAQEKGMKPDNLTFPFVLKACAKTCAPKEGEQMHNHVIKLGFLLDIFVSNS 980
Query: 328 IIHFYAACGRINLARLQF-ELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVY- 385
+I+ YAACG + AR F E+ +KD + SWN+LI G+ ++ +++ LF MQ +V
Sbjct: 981 LIYLYAACGALACARSVFNEMLVKD-VVSWNSLIGGYSQHNRLKEVLTLFKLMQAEEVQA 1039
Query: 386 ---SWSAMISGYAQNEQPNMA------LELFHGMVDAGVKPNEITMVSVFCAIASSGTLK 436
+ +IS +MA +E H VD + T++ +C I G L+
Sbjct: 1040 DKVTMVKVISACTHLGDWSMADCMVRYIEHNHIEVDVYLGN---TLIDYYCRI---GQLQ 1093
Query: 437 EGRWAHEYVLN-NSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIIC 495
+ + N++TLN A+I YAK G++ +A ++F I ++ + W+++IC
Sbjct: 1094 SAEKVFSQMKDKNTVTLN-----AMITAYAKGGNLVSAKKIFDQIPNK--DLISWSSMIC 1146
Query: 496 GLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVE 555
+ + +L+++ +++ +K +++ VLS C H G +DLG ++ N++
Sbjct: 1147 AYSQASHFSDSLELFRQMQRAKVKPDAVVIASVLSACAHLGALDLG-KWIHDYVRRNNIK 1205
Query: 556 PDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLL 597
D ++D+ + G +++A +V M K D + W +++
Sbjct: 1206 ADTIMENSLIDMFAKCGCVQEALQVFTDMEEK-DTLSWNSII 1246
>gi|449443327|ref|XP_004139431.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Cucumis sativus]
gi|449521082|ref|XP_004167560.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Cucumis sativus]
Length = 583
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 194/620 (31%), Positives = 302/620 (48%), Gaps = 97/620 (15%)
Query: 43 QQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRN 102
+QIH+ + SGL + F+ + ++ +A + AC+ + G N
Sbjct: 22 RQIHAQLVTSGLVYDDFVTSKVMEFFA-------------NFVEYGDYACDYLEQG---N 65
Query: 103 DRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVI 162
RL + S+I G+ + + A+ V+R M G +P+ T ++
Sbjct: 66 TRLGS-------------FPFNSLINGYVGGEFPQMAVSVYRRMVRDGFVPDMFTFPVLL 112
Query: 163 SSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIV 222
+ + G E R +HG+V+KL + + +L+ Y C A +FDEM R
Sbjct: 113 KACSNFSGSREGRQVHGVVVKLGLLADHYVQNSLIRCYGACGDFSCAGKVFDEMLVR--- 169
Query: 223 SWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDG 282
DVVSW ++I G+++ EA++++ M
Sbjct: 170 ----------------------------DVVSWNSLISGFMKAGHFDEAISVFFRM---D 198
Query: 283 IAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLAR 342
+ P+ +V +++AC R G IH +I
Sbjct: 199 VEPSMTTLVSVLAACARNGDLCTGKGIHGVI----------------------------- 229
Query: 343 LQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNM 402
E K ++ NA++ +++NG +A+ +F+ + RD+ SW+ MI+G Q++ P
Sbjct: 230 ---ERRFKVNLVLGNAMLDMYVKNGCFYEAKNIFDELPTRDIVSWTIMITGLVQSDHPKQ 286
Query: 403 ALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIID 462
+LELF M G+ P+ I + SV A AS GTL G W HEY+ I + ++ AI+D
Sbjct: 287 SLELFSMMRTLGISPDAIILTSVLSACASLGTLDFGTWVHEYINQRGIKWDIHIGTAIVD 346
Query: 463 MYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNS 522
MYAKCG I A ++FY + R T WNA++CGLAMHG + L ++ + +K N
Sbjct: 347 MYAKCGCIEMALKIFYSMSQRNTFT--WNALLCGLAMHGLVHEALNLFEVMIISGVKPNE 404
Query: 523 ITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIR 582
ITF+ +L+ CCH GLVD G +YF +M +YN+ P L+HYGCM+DL RAG LE+A E+ R
Sbjct: 405 ITFLAILTACCHCGLVDEGRKYFDNMSKLYNLLPKLEHYGCMIDLFCRAGLLEEAVELAR 464
Query: 583 SMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWED 642
+MPMK DV+IWG LL A GN+E+ R + L VLLSNI A RW +
Sbjct: 465 TMPMKPDVLIWGLLLNACTTVGNIELSHRIQDYILELDHDDSGVFVLLSNISAINQRWSN 524
Query: 643 AFSIRKEMRDCGMKRLPGFS 662
+R+ M+D G+++ PG S
Sbjct: 525 VTRLRRLMKDRGVRKAPGSS 544
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 123/488 (25%), Positives = 206/488 (42%), Gaps = 113/488 (23%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
L+ CS +G+Q+H ++ K GL ++ ++QNSLI Y CG S A +FD D
Sbjct: 112 LKACSNFSGSREGRQVHGVVVKLGLLADHYVQNSLIRCYGACGDFSCAGKVFDEMLVRDV 171
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
V+ N +ISG+++ ++A VF FR +
Sbjct: 172 VSWNSLISGFMKAGHFDEAISVF------------------------------FR----M 197
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
V P+ TL SV+++ G + + +HG VI+ +++ +L+MY EA
Sbjct: 198 DVEPSMTTLVSVLAACARNGDLCTGKGIHG-VIERRFKVNLVLGNAMLDMYVKNGCFYEA 256
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLS 269
+++FDE+ R+IVSW +M+ G ++ + + ELF
Sbjct: 257 KNIFDELPTRDIVSWTIMITGLVQSDHPKQSLELF------------------------- 291
Query: 270 EALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATII 329
+M R + GI+P+ +++ ++SAC G +H I + G I I+
Sbjct: 292 ---SMMRTL---GISPDAIILTSVLSACASLGTLDFGTWVHEYINQRGIKWDIHIGTAIV 345
Query: 330 HFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSA 389
YA CG I +A F + + +WNAL+ G +G++ +
Sbjct: 346 DMYAKCGCIEMALKIFYSMSQRNTFTWNALLCGLAMHGLVHE------------------ 387
Query: 390 MISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNS 449
AL LF M+ +GVKPNEIT +++ A G + EGR +Y N S
Sbjct: 388 -------------ALNLFEVMIISGVKPNEITFLAILTACCHCGLVDEGR---KYFDNMS 431
Query: 450 ITLN--DNLS--AAIIDMYAKCGSINTAFEVFYHIRDRTTSVSP----WNAIICGLAMHG 501
N L +ID++ + G + A E+ RT + P W ++ G
Sbjct: 432 KLYNLLPKLEHYGCMIDLFCRAGLLEEAVEL-----ARTMPMKPDVLIWGLLLNACTTVG 486
Query: 502 DANLTLKI 509
+ L+ +I
Sbjct: 487 NIELSHRI 494
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 64/311 (20%), Positives = 133/311 (42%), Gaps = 40/311 (12%)
Query: 289 MIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELG 348
+++D I C F QIH+ +V +G DF+ + ++ F+A +++
Sbjct: 7 VLLDSIKDCKNLRIFR---QIHAQLVTSGLVYDDFVTSKVMEFFANF-------VEYGDY 56
Query: 349 IKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFH 408
D++ N + F ++++I+GY E P MA+ ++
Sbjct: 57 ACDYLEQGNTRLGSF----------------------PFNSLINGYVGGEFPQMAVSVYR 94
Query: 409 GMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCG 468
MV G P+ T + A ++ +EGR H V+ + + + ++I Y CG
Sbjct: 95 RMVRDGFVPDMFTFPVLLKACSNFSGSREGRQVHGVVVKLGLLADHYVQNSLIRCYGACG 154
Query: 469 SINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGV 528
+ A +VF + R V WN++I G G + + ++ + +++ + T + V
Sbjct: 155 DFSCAGKVFDEMLVR--DVVSWNSLISGFMKAGHFDEAISVFF---RMDVEPSMTTLVSV 209
Query: 529 LSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKA 588
L+ C G + G+ ++ + V L + M+D+ + G +A+ + +P +
Sbjct: 210 LAACARNGDLCTGKGIHGVIERRFKVNLVLGN--AMLDMYVKNGCFYEAKNIFDELPTR- 266
Query: 589 DVVIWGTLLAA 599
D+V W ++
Sbjct: 267 DIVSWTIMITG 277
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 104/236 (44%), Gaps = 45/236 (19%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+ L S L C++ + G +H I + G++ + I +++++YAKCG I A +F S
Sbjct: 304 IILTSVLSACASLGTLDFGTWVHEYINQRGIKWDIHIGTAIVDMYAKCGCIEMALKIFYS 363
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
S R F ++ +++ G A + EAL +F
Sbjct: 364 MSQ----------------------RNTF---------TWNALLCGLAMHGLVHEALNLF 392
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRM-------LHGLVIKLMIDGFVIISTNL 196
M I GV PNE+T +++++ H G + E R L+ L+ KL G +I
Sbjct: 393 EVMIISGVKPNEITFLAILTACCHCGLVDEGRKYFDNMSKLYNLLPKLEHYGCMI----- 447
Query: 197 LNMYCVCSSLVEARSLFDEMKER-NIVSWNVMLNGFAKAGLVELARELFERIPSKD 251
+++C L EA L M + +++ W ++LN G +EL+ + + I D
Sbjct: 448 -DLFCRAGLLEEAVELARTMPMKPDVLIWGLLLNACTTVGNIELSHRIQDYILELD 502
>gi|413934850|gb|AFW69401.1| hypothetical protein ZEAMMB73_719952 [Zea mays]
Length = 742
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 167/494 (33%), Positives = 285/494 (57%), Gaps = 4/494 (0%)
Query: 174 CRMLHGLVIKLMIDGFV-IISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFA 232
C MLH ++ M+ +++ L++MY +AR FDE+ ++ V W ++ G
Sbjct: 123 CLMLHAACLRTMLPSAAPLVANPLIHMYASMGLTDDARRAFDEIPAKDAVVWATVIGGLV 182
Query: 233 KAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVD 292
+ GL++ AR L + P ++VVSW ++I GY + R ++A+ + ML DG+AP++V ++
Sbjct: 183 RWGLLDEARRLLVQAPERNVVSWTSLIAGYSRAGRPADAVYCFNCMLSDGVAPDEVAVIG 242
Query: 293 LISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFE-LGIKD 351
+SAC + G +H ++ + D + +I YA CG I A+ F+ +G
Sbjct: 243 ALSACSKLKNLDLGRLLHLLVGQKRIRMTDNLVVALIDMYAKCGDIAQAQAVFDAVGRGQ 302
Query: 352 HIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMV 411
WNA+I G+ + G ++ AR LF+ M RDV ++++MI+GY + + AL+LF M
Sbjct: 303 KPEPWNAIIDGYCKLGHVDVARSLFDQMGARDVITFNSMITGYIHSGRLRDALQLFMQMR 362
Query: 412 DAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSIN 471
G++ + T+VS+ A AS G L GR H + + + L A++DMY KCG ++
Sbjct: 363 RHGMRADNFTVVSLLTACASLGALPHGRALHASIEQRIVEEDVYLGTALLDMYMKCGRVD 422
Query: 472 TAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLST 531
A VF+ + +R V W A+I GLA +G L+ + +++ + S+T+I VL+
Sbjct: 423 EATAVFHRMGER--DVHTWTAMIAGLAFNGMGKDALESFCQMKRDGFQPTSVTYIAVLTA 480
Query: 532 CCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVV 591
C H+ L+D G +F M+S++ + P ++HYGCM+DLL R+G L++A ++++MPM+ + V
Sbjct: 481 CSHSSLLDEGRLHFNEMRSLHKLHPQVEHYGCMIDLLARSGLLDEAMHLVQTMPMQPNAV 540
Query: 592 IWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMR 651
IWG++L+A R+H N+++ AA+ L L P V L NIY D+ +W DA +R M
Sbjct: 541 IWGSILSACRVHKNIDLARHAAEHLLKLAPEEDAVYVQLYNIYIDSRQWADAKRVRMLME 600
Query: 652 DCGMKRLPGFSGVV 665
+ G+K+ G+S +
Sbjct: 601 ERGVKKTAGYSSIT 614
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 128/469 (27%), Positives = 233/469 (49%), Gaps = 45/469 (9%)
Query: 45 IHSLIFKSGLESNT-FIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRND 103
+H+ ++ L S + N LI++YA GL A+ FD D V +I G +R
Sbjct: 126 LHAACLRTMLPSAAPLVANPLIHMYASMGLTDDARRAFDEIPAKDAVVWATVIGGLVRWG 185
Query: 104 RLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVIS 163
L++AR + + P + VS+TS+I G+++ +A+ F M GV P+EV + +S
Sbjct: 186 LLDEARRLLVQAPERNVVSWTSLIAGYSRAGRPADAVYCFNCMLSDGVAPDEVAVIGALS 245
Query: 164 SSVHLGGIWECRMLHGLVIK---LMIDGFVIISTNLLNMYCVCSSLVEARSLFDEM-KER 219
+ L + R+LH LV + M D V+ L++MY C + +A+++FD + + +
Sbjct: 246 ACSKLKNLDLGRLLHLLVGQKRIRMTDNLVV---ALIDMYAKCGDIAQAQAVFDAVGRGQ 302
Query: 220 NIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAML 279
WN +++G+ K G V++AR LF+++ ++DV+++ +MI GY+ RL +AL ++ M
Sbjct: 303 KPEPWNAIIDGYCKLGHVDVARSLFDQMGARDVITFNSMITGYIHSGRLRDALQLFMQMR 362
Query: 280 CDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRIN 339
G+ ++ +V L++AC A G +H+ I + + ++ ++ Y CGR++
Sbjct: 363 RHGMRADNFTVVSLLTACASLGALPHGRALHASIEQRIVEEDVYLGTALLDMYMKCGRVD 422
Query: 340 LARLQF-ELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNE 398
A F +G +D + +W A+IAG NGM +DA + F M KRD
Sbjct: 423 EATAVFHRMGERD-VHTWTAMIAGLAFNGMGKDALESFCQM-KRD--------------- 465
Query: 399 QPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLS- 457
G +P +T ++V A + S L EGR H + + L+ +
Sbjct: 466 ---------------GFQPTSVTYIAVLTACSHSSLLDEGRL-HFNEMRSLHKLHPQVEH 509
Query: 458 -AAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANL 505
+ID+ A+ G ++ A + + + +V W +I+ +H + +L
Sbjct: 510 YGCMIDLLARSGLLDEAMHLVQTMPMQPNAVI-WGSILSACRVHKNIDL 557
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 144/285 (50%), Gaps = 32/285 (11%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E+A++ AL CS + G+ +H L+ + + + +LI++YAKCG I+QA+++FD
Sbjct: 237 EVAVIGALSACSKLKNLDLGRLLHLLVGQKRIRMTDNLVVALIDMYAKCGDIAQAQAVFD 296
Query: 83 SCST-LDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALE 141
+ P N +I GY + ++ AR +FD+ + +++ SMI G+ + R+AL+
Sbjct: 297 AVGRGQKPEPWNAIIDGYCKLGHVDVARSLFDQMGARDVITFNSMITGYIHSGRLRDALQ 356
Query: 142 VFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYC 201
+F MR G+ + T+ S++++ LG + R LH + + +++ V + T LL+MY
Sbjct: 357 LFMQMRRHGMRADNFTVVSLLTACASLGALPHGRALHASIEQRIVEEDVYLGTALLDMYM 416
Query: 202 VCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDG 261
C + EA ++F M ER++ +W M+ G A G+ KD ++
Sbjct: 417 KCGRVDEATAVFHRMGERDVHTWTAMIAGLAFNGM------------GKDA------LES 458
Query: 262 YLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEG 306
+ Q++R DG P V + +++AC + EG
Sbjct: 459 FCQMKR-------------DGFQPTSVTYIAVLTACSHSSLLDEG 490
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 102/242 (42%), Gaps = 72/242 (29%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+VS L C++ A+ G+ +H+ I + +E + ++ +L+++Y KCG
Sbjct: 371 FTVVSLLTACASLGALPHGRALHASIEQRIVEEDVYLGTALLDMYMKCG----------- 419
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
R+++A VF + + ++T+MI G A N ++ALE F
Sbjct: 420 --------------------RVDEATAVFHRMGERDVHTWTAMIAGLAFNGMGKDALESF 459
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
M+ G P VT +V+++ H ++LL+
Sbjct: 460 CQMKRDGFQPTSVTYIAVLTACSH--------------------------SSLLD----- 488
Query: 204 SSLVEARSLFDEMK-----ERNIVSWNVMLNGFAKAGLVELARELFERIP-SKDVVSWGT 257
E R F+EM+ + + M++ A++GL++ A L + +P + V WG+
Sbjct: 489 ----EGRLHFNEMRSLHKLHPQVEHYGCMIDLLARSGLLDEAMHLVQTMPMQPNAVIWGS 544
Query: 258 MI 259
++
Sbjct: 545 IL 546
>gi|225447043|ref|XP_002269269.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 640
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 171/458 (37%), Positives = 260/458 (56%), Gaps = 4/458 (0%)
Query: 207 VEARSLFDEMKERNIVSWNVM-LNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQV 265
+ A+++ + N V+ ++ + G + AR LF RI D+ T+I Y
Sbjct: 54 IHAQTITTGIFSDNFVASRILSFAALSPHGSIPYARFLFYRIRKPDIFIANTLIRAYAFS 113
Query: 266 ERLSEALTMYRAMLCDGIAPNDVMIVDLI-SACGRAMAFGEGLQIHSIIVKAGFDCYDFI 324
+A+ Y M + DV L+ AC + G IHS + K G+ +
Sbjct: 114 PNPIDAVVFYSEMTESSVVFPDVHTFPLLLKACSEIPSLRLGEAIHSHVFKLGWSSEVSV 173
Query: 325 QATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDV 384
++ YA+CG I A L F+ + ASWN +I G+++ G+ + AR++F M RDV
Sbjct: 174 SNFLVQMYASCGLIESAGLVFDRTPECDGASWNIMIGGYLKCGVFKSARRMFEAMPDRDV 233
Query: 385 YSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEY 444
SWS MI+GY Q + L LF M+ ++PNE +V+ A A G +++G+W Y
Sbjct: 234 VSWSVMINGYVQESRFKEGLGLFQDMMGEKIEPNESVLVNALSACAHLGAMEQGQWIERY 293
Query: 445 VLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDAN 504
+ ++ L L A+IDMY+KCGS+ A EVF+ ++++ +V W+A+I GLA++G
Sbjct: 294 MERKNVRLTVRLGTALIDMYSKCGSVERALEVFHKMKEK--NVLAWSAMINGLAINGQGK 351
Query: 505 LTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCM 564
L ++S +E + +K N +TFIG+L+ C H+ LVD G +F SM S+Y ++P+ H+ CM
Sbjct: 352 DALNLFSQMEMQGVKPNEVTFIGILNACSHSKLVDEGCSFFHSMTSIYGLKPNAHHHCCM 411
Query: 565 VDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHG 624
VDL GRAG L+ A+ VI+SMP K + IWG LL A RIHG+ E+GE+ K L L P+HG
Sbjct: 412 VDLYGRAGMLDQAQTVIKSMPFKPNSAIWGALLNACRIHGDTELGEQVGKRLLELDPNHG 471
Query: 625 PSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
VLLSNIYA GRW+ +R+ MR+ + + PG S
Sbjct: 472 GRYVLLSNIYAACGRWDRVAELRRMMRERQVSKTPGCS 509
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 131/502 (26%), Positives = 217/502 (43%), Gaps = 72/502 (14%)
Query: 14 KANLQNSDYE-------LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLIN 66
++NLQN + L LR+ S+ + QIH+ +G+ S+ F+ + +++
Sbjct: 16 QSNLQNQNPPWIPTPQLLCKYPILRHLSSCKTLKDLTQIHAQTITTGIFSDNFVASRILS 75
Query: 67 LYA--KCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYT 124
A G I A+ +F D N +I Y F PI V Y+
Sbjct: 76 FAALSPHGSIPYARFLFYRIRKPDIFIANTLIRAY-----------AFSPNPIDAVVFYS 124
Query: 125 SMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKL 184
M E+ VF D+ P + S I S + LG +H V KL
Sbjct: 125 EMT----------ESSVVFPDVH---TFPLLLKACSEIPS-LRLG-----EAIHSHVFKL 165
Query: 185 MIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELF 244
V +S L+ MY C + A +FD E + SWN+M+ G+ K G+ + AR +F
Sbjct: 166 GWSSEVSVSNFLVQMYASCGLIESAGLVFDRTPECDGASWNIMIGGYLKCGVFKSARRMF 225
Query: 245 ERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFG 304
E +P +DVVSW MI+GY+Q R E L +++ M+ + I PN+ ++V+ +SAC A
Sbjct: 226 EAMPDRDVVSWSVMINGYVQESRFKEGLGLFQDMMGEKIEPNESVLVNALSACAHLGAME 285
Query: 305 EGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFI 364
+G I + + + +I Y+ CG + A F + ++ +W+A+I G
Sbjct: 286 QGQWIERYMERKNVRLTVRLGTALIDMYSKCGSVERALEVFHKMKEKNVLAWSAMINGLA 345
Query: 365 RNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVS 424
NG +DA LF+ M+ + GVKPNE+T +
Sbjct: 346 INGQGKDALNLFSQMEMQ-------------------------------GVKPNEVTFIG 374
Query: 425 VFCAIASSGTLKEG-RWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDR 483
+ A + S + EG + H + N + ++D+Y + G ++ A V + +
Sbjct: 375 ILNACSHSKLVDEGCSFFHSMTSIYGLKPNAHHHCCMVDLYGRAGMLDQAQTVIKSMPFK 434
Query: 484 TTSVSPWNAIICGLAMHGDANL 505
S + W A++ +HGD L
Sbjct: 435 PNS-AIWGALLNACRIHGDTEL 455
>gi|449467070|ref|XP_004151248.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 617
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 160/426 (37%), Positives = 254/426 (59%), Gaps = 2/426 (0%)
Query: 240 ARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGR 299
A+ +F+ + + +V W T + + + + ++A++++ + I+P+ ++ AC R
Sbjct: 66 AKLIFQLLDASEVTHWNTCLRSFAEGDSPADAISLFYRLREFDISPDHYTCSFVLKACSR 125
Query: 300 AMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNAL 359
+ G +H + K G F+Q I+H YA CG I +AR F+ + + +WN +
Sbjct: 126 LLDVRNGKIVHGYVEKLGLQSNMFLQNMIVHLYALCGEIGVARKVFDKMPQRDVITWNIM 185
Query: 360 IAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNE 419
IA ++ G E A +LF M +R+V SW++MI GYAQ + A++LF M DAG+ PNE
Sbjct: 186 IARLVKMGDAEGAYKLFAEMPERNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLPNE 245
Query: 420 ITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYH 479
+T+V+V A A G L GR H++ + N + +IDMY KCG + A +F +
Sbjct: 246 VTVVAVLVACADMGNLVLGRRIHDFSNRSGYEKNIRVCNTLIDMYVKCGCLEDACRIFDN 305
Query: 480 IRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVD 539
+ +RT V W+A+I GLA HG A L +++ + +K N++TFIG+L C H G+V+
Sbjct: 306 MEERT--VVSWSAMIAGLAAHGRAEDALALFNKMINTGVKPNAVTFIGILHACSHMGMVE 363
Query: 540 LGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAA 599
G +YF SM Y + P ++HYGCMVDL RAG L++A E I +MP+ + V+WG LL
Sbjct: 364 KGRKYFASMTRDYGIVPRIEHYGCMVDLFSRAGLLQEAHEFIMNMPIAPNGVVWGALLGG 423
Query: 600 SRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLP 659
++H N+++ E A + L+ L P + V+LSNIYA+AGRWED +RK MRD G+K+ P
Sbjct: 424 CKVHKNIKLAEEATRHLSKLDPLNDGYYVVLSNIYAEAGRWEDVARVRKLMRDRGVKKTP 483
Query: 660 GFSGVV 665
G+S ++
Sbjct: 484 GWSSIM 489
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 102/415 (24%), Positives = 193/415 (46%), Gaps = 33/415 (7%)
Query: 102 NDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASV 161
N + A+ +F + + + FA+ D +A+ +F +R + P+ T + V
Sbjct: 60 NSSFSYAKLIFQLLDASEVTHWNTCLRSFAEGDSPADAISLFYRLREFDISPDHYTCSFV 119
Query: 162 ISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNI 221
+ + L + +++HG V KL + + + ++++Y +C + AR +FD+M +R++
Sbjct: 120 LKACSRLLDVRNGKIVHGYVEKLGLQSNMFLQNMIVHLYALCGEIGVARKVFDKMPQRDV 179
Query: 222 VSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCD 281
++WN+M+ K G E A +LF +P ++V SW +MI GY Q + EA+ ++ M
Sbjct: 180 ITWNIMIARLVKMGDAEGAYKLFAEMPERNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDA 239
Query: 282 GIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLA 341
G+ PN+V +V ++ AC G +IH ++G++ + T+I Y CG + A
Sbjct: 240 GLLPNEVTVVAVLVACADMGNLVLGRRIHDFSNRSGYEKNIRVCNTLIDMYVKCGCLEDA 299
Query: 342 RLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPN 401
F+ + + SW+A+IAG +G EDA LFN
Sbjct: 300 CRIFDNMEERTVVSWSAMIAGLAAHGRAEDALALFNK----------------------- 336
Query: 402 MALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGR-WAHEYVLNNSITLNDNLSAAI 460
M++ GVKPN +T + + A + G +++GR + + I +
Sbjct: 337 --------MINTGVKPNAVTFIGILHACSHMGMVEKGRKYFASMTRDYGIVPRIEHYGCM 388
Query: 461 IDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEK 515
+D++++ G + A E ++ V W A++ G +H + L + L K
Sbjct: 389 VDLFSRAGLLQEAHEFIMNMPIAPNGVV-WGALLGGCKVHKNIKLAEEATRHLSK 442
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 120/496 (24%), Positives = 210/496 (42%), Gaps = 101/496 (20%)
Query: 1 TPLDHFHSVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFI 60
+P D + ++ ++ Y + V L+ CS + V G+ +H + K GL+SN F+
Sbjct: 93 SPADAISLFYRLREFDISPDHYTCSFV--LKACSRLLDVRNGKIVHGYVEKLGLQSNMFL 150
Query: 61 QNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCC 120
QN +++LYA CG I A+ +FD D + NIMI+ ++ A ++F + P +
Sbjct: 151 QNMIVHLYALCGEIGVARKVFDKMPQRDVITWNIMIARLVKMGDAEGAYKLFAEMPERNV 210
Query: 121 VSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGL 180
S+TSMI G+AQ +EA+++F +M G++PNEVT+ +V+ + +G + R +H
Sbjct: 211 RSWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLPNEVTVVAVLVACADMGNLVLGRRIHDF 270
Query: 181 VIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELA 240
+ + + + L++MY C L +A +FD M+ER +VSW+ M+ G A G
Sbjct: 271 SNRSGYEKNIRVCNTLIDMYVKCGCLEDACRIFDNMEERTVVSWSAMIAGLAAHG----- 325
Query: 241 RELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRA 300
R +AL ++ M+ G+ PN V + ++ AC
Sbjct: 326 --------------------------RAEDALALFNKMINTGVKPNAVTFIGILHACS-- 357
Query: 301 MAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALI 360
H +V+ GR A + + GI I + ++
Sbjct: 358 ---------HMGMVEK-------------------GRKYFASMTRDYGIVPRIEHYGCMV 389
Query: 361 AGFIRNGMIEDARQLFNNMQ-KRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNE 419
F R G++++A + NM + W A++ G
Sbjct: 390 DLFSRAGLLQEAHEFIMNMPIAPNGVVWGALLGG-------------------------- 423
Query: 420 ITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYH 479
C + + L E H L+ LND + ++YA+ G V
Sbjct: 424 -------CKVHKNIKLAEEATRH---LSKLDPLNDGYYVVLSNIYAEAGRWEDVARVRKL 473
Query: 480 IRDRTTSVSP-WNAII 494
+RDR +P W++I+
Sbjct: 474 MRDRGVKKTPGWSSIM 489
>gi|255574750|ref|XP_002528283.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532320|gb|EEF34121.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 602
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 164/468 (35%), Positives = 271/468 (57%), Gaps = 1/468 (0%)
Query: 190 VIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPS 249
++ +L+NMY C A +FDEM RN+ SWN ML+G+AK G ++ AR+LF+++P
Sbjct: 86 TFLANHLINMYSKCGDYPSAYKVFDEMSTRNLYSWNGMLSGYAKLGKIKPARKLFDKMPE 145
Query: 250 KDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQI 309
KDVVSW TM+ Y + ++AL YR + GI N+ L++ C + Q
Sbjct: 146 KDVVSWNTMVIAYAKSGFCNDALRFYRELRRLGIGYNEYSFAGLLNICVKVKELELSKQA 205
Query: 310 HSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMI 369
H ++ AGF I ++++ YA C + AR F+ I + +W +++G+ + G +
Sbjct: 206 HGQVLVAGFLSNLVISSSVLDAYAKCSEMGDARRLFDEMIIRDVLAWTTMVSGYAQWGDV 265
Query: 370 EDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAI 429
E AR+LF+ M +++ +W+++I+GYA+++ + ALELF M+ ++P++ T S CA
Sbjct: 266 EAARELFDLMPEKNPVAWTSLIAGYARHDLGHKALELFTKMMALNIRPDQFTFSSCLCAS 325
Query: 430 ASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSP 489
AS +L G+ H Y++ +I N + +++IDMY+KCG + VF + D+ V
Sbjct: 326 ASIASLNHGKQIHGYLIRTNIRPNTIVVSSLIDMYSKCGCLEVGRLVFDLMGDK-WDVVL 384
Query: 490 WNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMK 549
WN II LA HG ++++ D+ + +K + IT I +L+ C H+GLV G R ++S+
Sbjct: 385 WNTIISSLAQHGRGQEAIQMFDDMVRLGMKPDRITLIVLLNACSHSGLVQEGLRLYESIT 444
Query: 550 SVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVG 609
S + V P+ +HY C++DLLGRAG + + MP K + IW LL R+HGN+E G
Sbjct: 445 SCHGVIPNQEHYACLIDLLGRAGHFDTLMNQLEKMPCKPNDEIWNALLGVCRMHGNIEFG 504
Query: 610 ERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKR 657
A+ + L P + VLLS+I+A GRWE ++R+ M + +++
Sbjct: 505 REVAEKIIELDPQSSAAYVLLSSIHAAVGRWELVENVRQLMNERHVRK 552
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 138/484 (28%), Positives = 256/484 (52%), Gaps = 41/484 (8%)
Query: 25 ALVSALRYCSAHIAVSQGQQIHSLIFKSGLE-SNTFIQNSLINLYAKCGLISQAKSMFDS 83
L L+ C+ ++ G+ +H + +GL+ NTF+ N LIN+Y+KCG A +FD
Sbjct: 52 TLAYLLQQCANTKSLKLGKWVHLHLKVTGLKRPNTFLANHLINMYSKCGDYPSAYKVFDE 111
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
ST + + N M+SGY + ++ AR++FDK P K VS+ +M++ +A++ +AL +
Sbjct: 112 MSTRNLYSWNGMLSGYAKLGKIKPARKLFDKMPEKDVVSWNTMVIAYAKSGFCNDALRFY 171
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGF---VIISTNLLNMY 200
R++R LG+ NE + A +++ V + + + HG ++++ GF ++IS+++L+ Y
Sbjct: 172 RELRRLGIGYNEYSFAGLLNICVKVKELELSKQAHG---QVLVAGFLSNLVISSSVLDAY 228
Query: 201 CVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMID 260
CS + +AR LFDEM R++++W M++G+A+ G VE ARELF+ +P K+ V+W ++I
Sbjct: 229 AKCSEMGDARRLFDEMIIRDVLAWTTMVSGYAQWGDVEAARELFDLMPEKNPVAWTSLIA 288
Query: 261 GYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDC 320
GY + + +AL ++ M+ I P+ + A + G QIH +++
Sbjct: 289 GYARHDLGHKALELFTKMMALNIRPDQFTFSSCLCASASIASLNHGKQIHGYLIRTNIRP 348
Query: 321 YDFIQATIIHFYAACGRINLARLQFEL-GIKDHIASWNALIAGFIRNGMIEDARQLFNNM 379
+ +++I Y+ CG + + RL F+L G K + WN +I+ ++G ++A Q+F++
Sbjct: 349 NTIVVSSLIDMYSKCGCLEVGRLVFDLMGDKWDVVLWNTIISSLAQHGRGQEAIQMFDD- 407
Query: 380 QKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGR 439
MV G+KP+ IT++ + A + SG ++EG
Sbjct: 408 ------------------------------MVRLGMKPDRITLIVLLNACSHSGLVQEGL 437
Query: 440 WAHEYVLN-NSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLA 498
+E + + + + N A +ID+ + G +T + + WNA++
Sbjct: 438 RLYESITSCHGVIPNQEHYACLIDLLGRAGHFDTLMNQLEKMPCKPND-EIWNALLGVCR 496
Query: 499 MHGD 502
MHG+
Sbjct: 497 MHGN 500
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 101/375 (26%), Positives = 176/375 (46%), Gaps = 40/375 (10%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E + L C + +Q H + +G SN I +S+++ YAKC + A+ +FD
Sbjct: 183 EYSFAGLLNICVKVKELELSKQAHGQVLVAGFLSNLVISSSVLDAYAKCSEMGDARRLFD 242
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
D +A M+SGY + + ARE+FD P K V++TS+I G+A++D +ALE+
Sbjct: 243 EMIIRDVLAWTTMVSGYAQWGDVEAARELFDLMPEKNPVAWTSLIAGYARHDLGHKALEL 302
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
F M L + P++ T +S + +S + + + +HG +I+ I I+ ++L++MY
Sbjct: 303 FTKMMALNIRPDQFTFSSCLCASASIASLNHGKQIHGYLIRTNIRPNTIVVSSLIDMYSK 362
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
C L R +FD M ++ W+V+L W T+I
Sbjct: 363 CGCLEVGRLVFDLMGDK----WDVVL--------------------------WNTIISSL 392
Query: 263 LQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD 322
Q R EA+ M+ M+ G+ P+ + ++ L++AC + EGL+++ I C+
Sbjct: 393 AQHGRGQEAIQMFDDMVRLGMKPDRITLIVLLNACSHSGLVQEGLRLYESIT----SCHG 448
Query: 323 FIQ-----ATIIHFYAACGRINLARLQFE-LGIKDHIASWNALIAGFIRNGMIEDARQLF 376
I A +I G + Q E + K + WNAL+ +G IE R++
Sbjct: 449 VIPNQEHYACLIDLLGRAGHFDTLMNQLEKMPCKPNDEIWNALLGVCRMHGNIEFGREVA 508
Query: 377 NNMQKRDVYSWSAMI 391
+ + D S +A +
Sbjct: 509 EKIIELDPQSSAAYV 523
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 99/409 (24%), Positives = 175/409 (42%), Gaps = 42/409 (10%)
Query: 281 DGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD-FIQATIIHFYAACGRIN 339
+GI + L+ C + G +H + G + F+ +I+ Y+ CG
Sbjct: 44 NGIRLPSKTLAYLLQQCANTKSLKLGKWVHLHLKVTGLKRPNTFLANHLINMYSKCGDYP 103
Query: 340 LARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQ 399
A F+ ++ SWN +++G+ + G I+ AR+LF+ M ++DV SW+ M+ YA++
Sbjct: 104 SAYKVFDEMSTRNLYSWNGMLSGYAKLGKIKPARKLFDKMPEKDVVSWNTMVIAYAKSGF 163
Query: 400 PNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAA 459
N AL + + G+ NE + + L+ + AH VL N +S++
Sbjct: 164 CNDALRFYRELRRLGIGYNEYSFAGLLNICVKVKELELSKQAHGQVLVAGFLSNLVISSS 223
Query: 460 IIDMYAKCGSINTAFEVFYH--IRD---RTTSVS------------------------PW 490
++D YAKC + A +F IRD TT VS W
Sbjct: 224 VLDAYAKCSEMGDARRLFDEMIIRDVLAWTTMVSGYAQWGDVEAARELFDLMPEKNPVAW 283
Query: 491 NAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGE-RYFKSMK 549
++I G A H + L++++ + NI+ + TF L C A + L +
Sbjct: 284 TSLIAGYARHDLGHKALELFTKMMALNIRPDQFTFSSCL--CASASIASLNHGKQIHGYL 341
Query: 550 SVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVG 609
N+ P+ ++D+ + G LE V M K DVV+W T++++ HG G
Sbjct: 342 IRTNIRPNTIVVSSLIDMYSKCGCLEVGRLVFDLMGDKWDVVLWNTIISSLAQHGR---G 398
Query: 610 ERAAKSL-----AGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDC 653
+ A + G++P VLL N + +G ++ + + + C
Sbjct: 399 QEAIQMFDDMVRLGMKPDRITLIVLL-NACSHSGLVQEGLRLYESITSC 446
>gi|449480302|ref|XP_004155856.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 182/560 (32%), Positives = 299/560 (53%), Gaps = 66/560 (11%)
Query: 108 AREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGV-IPNEVTLASVISSSV 166
A VF T + +++ SM+ F ++ R AL+ + +M +P+ T S++
Sbjct: 31 AYSVFAHTRVLDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCA 90
Query: 167 HLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNV 226
L ++LHG V+K M+ + I T LLNMY C L
Sbjct: 91 LLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDL-------------------- 130
Query: 227 MLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPN 286
+ AR LFER+ ++ V W +MI GY++ +EAL +Y+ M DG +P+
Sbjct: 131 -----------KSARFLFERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPD 179
Query: 287 DVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFE 346
+V + L+SAC G G+++HS I + + + +++ YA CG +
Sbjct: 180 EVTMATLVSACAELKDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKCGDL-------- 231
Query: 347 LGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALEL 406
+ ARQ+F+ + +DVY+WSA+I GY +N + AL+L
Sbjct: 232 -----------------------KTARQVFDQLSDKDVYAWSALIFGYVKNNRSTEALQL 268
Query: 407 FHGMVD-AGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYA 465
F + + ++PNE+T+++V A A G L+ GRW H+Y+ + +L+ ++IDM++
Sbjct: 269 FREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFS 328
Query: 466 KCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITF 525
KCG I+ A +F + + + WN+++ GLA+HG L + ++ +++ + ITF
Sbjct: 329 KCGDIDAAKRIFDSMSYK--DLISWNSMVNGLALHGLGREALAQFHLMQTTDLQPDEITF 386
Query: 526 IGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMP 585
IGVL+ C HAGLV G++ F ++++Y V +HYGCMVDLL RAG L +A E IR MP
Sbjct: 387 IGVLTACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMP 446
Query: 586 MKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFS 645
++ D IWG++L A R++ N+E+GE AA+ L L+P++ +LLSNIYA W +
Sbjct: 447 LQPDGAIWGSMLGACRVYNNLELGEEAARCLLELEPTNDGVYILLSNIYARRKMWNEVKK 506
Query: 646 IRKEMRDCGMKRLPGFSGVV 665
+R+ M + G+++ PG S VV
Sbjct: 507 VRELMNEKGIQKTPGCSSVV 526
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 110/479 (22%), Positives = 204/479 (42%), Gaps = 102/479 (21%)
Query: 18 QNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQA 77
+N S L+ C+ + G+ +H + K L S+ +I+ +L+N+YA CG
Sbjct: 74 RNVPDRFTFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACG----- 128
Query: 78 KSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWR 137
L AR +F++ + V +TSMI G+ +N C
Sbjct: 129 --------------------------DLKSARFLFERMGHRNKVVWTSMISGYMKNHCPN 162
Query: 138 EALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLL 197
EAL +++ M G P+EVT+A+++S+ L + LH + ++ + ++ + L+
Sbjct: 163 EALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDMKICAVLGSALV 222
Query: 198 NMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGT 257
NMY C L AR +FD++ ++++ +W+
Sbjct: 223 NMYAKCGDLKTARQVFDQLSDKDVYAWS-------------------------------A 251
Query: 258 MIDGYLQVERLSEALTMYRAML-CDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKA 316
+I GY++ R +EAL ++R + + PN+V I+ +ISAC + G +H I +
Sbjct: 252 LIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRT 311
Query: 317 GFDCYDFIQATIIHFYAACGRINLARLQFE-LGIKDHIASWNALIAGFIRNGMIEDARQL 375
+ ++I ++ CG I+ A+ F+ + KD I SWN+++ G +G+ +A
Sbjct: 312 QKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLI-SWNSMVNGLALHGLGREALAQ 370
Query: 376 FNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTL 435
F+ MQ D ++P+EIT + V A + +G +
Sbjct: 371 FHLMQTTD-------------------------------LQPDEITFIGVLTACSHAGLV 399
Query: 436 KEG-RWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAI 493
+EG + +E + L ++D+ + G + A E R + P AI
Sbjct: 400 QEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFI-----RVMPLQPDGAI 453
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 100/243 (41%), Gaps = 49/243 (20%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E+ +++ + C+ + G+ +H I ++ + + NSLI++++KCG I AK
Sbjct: 282 EVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAK---- 337
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+FD K +S+ SM+ G A + REAL
Sbjct: 338 ---------------------------RIFDSMSYKDLISWNSMVNGLALHGLGREALAQ 370
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGI-------WECRMLHGLVIKLMIDGFVIISTN 195
F M+ + P+E+T V+++ H G + +E L+G+ +K G ++
Sbjct: 371 FHLMQTTDLQPDEITFIGVLTACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMV---- 426
Query: 196 LLNMYCVCSSLVEARSLFDEMK-ERNIVSWNVMLNGFAKAGLVEL----ARELFERIPSK 250
++ C L EAR M + + W ML +EL AR L E P+
Sbjct: 427 --DLLCRAGLLAEAREFIRVMPLQPDGAIWGSMLGACRVYNNLELGEEAARCLLELEPTN 484
Query: 251 DVV 253
D V
Sbjct: 485 DGV 487
>gi|356561762|ref|XP_003549147.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g66520-like [Glycine max]
Length = 622
Score = 323 bits (829), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 176/479 (36%), Positives = 275/479 (57%), Gaps = 11/479 (2%)
Query: 194 TNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGL---VELARELFERIPSK 250
+ L+++ C S+ + + ++ ++S V N K + A +LF++IP
Sbjct: 17 SRLVSLIDSCKSMQQIKQTHAQLITTALISHPVSANKLLKLAACASLSYAHKLFDQIPQP 76
Query: 251 DVVSWGTMIDGY-LQVERLSEALTMYRAMLCD-GIAPNDVMIVDLISACGRAMAFGEGLQ 308
D+ + TMI + L +L ++R++ D G+ PN V SACG + EG Q
Sbjct: 77 DLFIYNTMIKAHSLSPHSCHNSLIVFRSLTQDLGLFPNRYSFVFAFSACGNGLGVQEGEQ 136
Query: 309 IHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGM 368
+ VK G + F+ +I Y G + ++ F+ + + SWN LIA ++ +G
Sbjct: 137 VRIHAVKVGLENNVFVVNALIGMYGKWGLVGESQKVFQWAVDRDLYSWNTLIAAYVGSGN 196
Query: 369 IEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCA 428
+ A++LF+ M++RDV SWS +I+GY Q AL+ FH M+ G KPNE T+VS A
Sbjct: 197 MSLAKELFDGMRERDVVSWSTIIAGYVQVGCFMEALDFFHKMLQIGPKPNEYTLVSALAA 256
Query: 429 IASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVS 488
++ L +G+W H Y+ I +N+ L A+IIDMYAKCG I +A VF+ + + V
Sbjct: 257 CSNLVALDQGKWIHAYIGKGEIKMNERLLASIIDMYAKCGEIESASRVFFEHKVKQ-KVW 315
Query: 489 PWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSM 548
WNA+I G AMHG N + ++ ++ I N +TFI +L+ C H +V+ G+ YF+ M
Sbjct: 316 LWNAMIGGFAMHGMPNEAINVFEQMKVEKISPNKVTFIALLNACSHGYMVEEGKLYFRLM 375
Query: 549 KSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEV 608
S Y + P+++HYGCMVDLL R+G L++AE++I SMPM DV IWG LL A RI+ ++E
Sbjct: 376 VSDYAITPEIEHYGCMVDLLSRSGLLKEAEDMISSMPMAPDVAIWGALLNACRIYKDMER 435
Query: 609 GERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKE---MRDCGMKRLPGFSGV 664
G R + + G+ P+H VLLSNIY+ +GRW +A +R++ RD K++PG S +
Sbjct: 436 GYRIGRIIKGMDPNHIGCHVLLSNIYSTSGRWNEARILREKNEISRD--RKKIPGCSSI 492
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 128/509 (25%), Positives = 225/509 (44%), Gaps = 79/509 (15%)
Query: 10 FNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYA 69
F + A +SD+ LVS + C + + Q +Q H+ + + L S+ N L+ L A
Sbjct: 3 FYTTSAKPFHSDHYSRLVSLIDSCKS---MQQIKQTHAQLITTALISHPVSANKLLKL-A 58
Query: 70 KCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMG 129
C +S A +FD D N MI + +P C
Sbjct: 59 ACASLSYAHKLFDQIPQPDLFIYNTMIKAH-------------SLSPHSC---------- 95
Query: 130 FAQNDCWREALEVFRDM-RILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDG 188
+L VFR + + LG+ PN + S+ + G+ E + +K+ ++
Sbjct: 96 -------HNSLIVFRSLTQDLGLFPNRYSFVFAFSACGNGLGVQEGEQVRIHAVKVGLEN 148
Query: 189 FVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIP 248
V + L+ MY + E++ +F +R++ SWN ++ + +G + LA+ELF+ +
Sbjct: 149 NVFVVNALIGMYGKWGLVGESQKVFQWAVDRDLYSWNTLIAAYVGSGNMSLAKELFDGMR 208
Query: 249 SKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQ 308
+DVVSW T+I GY+QV EAL + ML G PN+ +V ++AC +A +G
Sbjct: 209 ERDVVSWSTIIAGYVQVGCFMEALDFFHKMLQIGPKPNEYTLVSALAACSNLVALDQGKW 268
Query: 309 IHSIIVKAGFDCYDFIQATIIHFYAACGRINLA-RLQFELGIKDHIASWNALIAGFIRNG 367
IH+ I K + + A+II YA CG I A R+ FE +K + WNA+I GF +G
Sbjct: 269 IHAYIGKGEIKMNERLLASIIDMYAKCGEIESASRVFFEHKVKQKVWLWNAMIGGFAMHG 328
Query: 368 MIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFC 427
M PN A+ +F M + PN++T +++
Sbjct: 329 M-------------------------------PNEAINVFEQMKVEKISPNKVTFIALLN 357
Query: 428 AIASSGTLKEGRWAHEYVLNN-SITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTS 486
A + ++EG+ ++++ +IT ++D+ ++ G + A ++ +
Sbjct: 358 ACSHGYMVEEGKLYFRLMVSDYAITPEIEHYGCMVDLLSRSGLLKEAEDMISSM-PMAPD 416
Query: 487 VSPWNAIICGLAMHGDANLTLKIYSDLEK 515
V+ W A++ +IY D+E+
Sbjct: 417 VAIWGALLNA----------CRIYKDMER 435
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 106/445 (23%), Positives = 192/445 (43%), Gaps = 79/445 (17%)
Query: 9 VFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLY 68
VF S +L + V A C + V +G+Q+ K GLE+N F+ N+LI +Y
Sbjct: 101 VFRSLTQDLGLFPNRYSFVFAFSACGNGLGVQEGEQVRIHAVKVGLENNVFVVNALIGMY 160
Query: 69 AKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIM 128
K GL+ +++ +F D + N +I+ Y+ + ++ A+E+FD + VS++++I
Sbjct: 161 GKWGLVGESQKVFQWAVDRDLYSWNTLIAAYVGSGNMSLAKELFDGMRERDVVSWSTIIA 220
Query: 129 GFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDG 188
G+ Q C+ EAL+ F M +G PNE TL S +++ +L + + + +H + K I
Sbjct: 221 GYVQVGCFMEALDFFHKMLQIGPKPNEYTLVSALAACSNLVALDQGKWIHAYIGKGEIKM 280
Query: 189 FVIISTNLLNMYCVCSSLVEARSLFDEMK-ERNIVSWNVMLNGFAKAGLVELARELFERI 247
+ ++++MY C + A +F E K ++ + WN M+ GFA G+
Sbjct: 281 NERLLASIIDMYAKCGEIESASRVFFEHKVKQKVWLWNAMIGGFAMHGMP---------- 330
Query: 248 PSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGL 307
+EA+ ++ M + I+PN V + L++AC EG
Sbjct: 331 ---------------------NEAINVFEQMKVEKISPNKVTFIALLNACSHGYMVEEG- 368
Query: 308 QIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDH-----IASWNALIAG 362
+L F L + D+ I + ++
Sbjct: 369 ----------------------------------KLYFRLMVSDYAITPEIEHYGCMVDL 394
Query: 363 FIRNGMIEDARQLFNNMQ-KRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEIT 421
R+G++++A + ++M DV W A+++ A +M G + G+ PN I
Sbjct: 395 LSRSGLLKEAEDMISSMPMAPDVAIWGALLN--ACRIYKDMERGYRIGRIIKGMDPNHIG 452
Query: 422 MVSVFCAIASSGTLKEGRWAHEYVL 446
+ I S+ GRW +L
Sbjct: 453 CHVLLSNIYSTS----GRWNEARIL 473
>gi|356495396|ref|XP_003516564.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 516
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 173/470 (36%), Positives = 262/470 (55%), Gaps = 10/470 (2%)
Query: 203 CSSLVEARSLFDEMKE----RNIVSWNVMLNGFAKAGLVELA--RELFERIPSKDVVSWG 256
CS++ E + ++ + RN ++ + +L +A+ LV LA R +F+ I S + V W
Sbjct: 20 CSNMKELMQIHGQLLKKGTIRNQLTVSTLLVSYARIELVNLAYTRVVFDSISSPNTVIWN 79
Query: 257 TMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKA 316
TM+ Y AL +Y ML + + N L+ AC AF E QIH+ I+K
Sbjct: 80 TMLRAYSNSNDPEAALLLYHQMLHNSVPHNSYTFPFLLKACSALSAFEETQQIHAHIIKR 139
Query: 317 GFDCYDFIQATIIHFYAACGRINLARLQF-ELGIKDHIASWNALIAGFIRNGMIEDARQL 375
GF + +++ YA G I A + F +L +D I SWN +I G+I+ G ++ A ++
Sbjct: 140 GFGLEVYATNSLLRVYAISGNIQSAHVLFNQLPTRD-IVSWNIMIDGYIKFGNLDMAYKI 198
Query: 376 FNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTL 435
F M +++V SW+ MI G+ + AL L M+ AG+KP+ IT+ A A G L
Sbjct: 199 FQAMPEKNVISWTTMIVGFVRIGMHKEALSLLQQMLVAGIKPDSITLSCSLSACAGLGAL 258
Query: 436 KEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIIC 495
++G+W H Y+ N I ++ L + DMY KCG + A VF + + V W AII
Sbjct: 259 EQGKWIHTYIEKNEIKIDPVLGCVLTDMYVKCGEMEKALLVFSKLEKKC--VCAWTAIIG 316
Query: 496 GLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVE 555
GLA+HG L ++ ++K I NSITF +L+ C HAGL + G+ F+SM SVYN++
Sbjct: 317 GLAIHGKGREALDWFTQMQKAGINPNSITFTAILTACSHAGLTEEGKSLFESMSSVYNIK 376
Query: 556 PDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKS 615
P ++HYGCMVDL+GRAG L++A E I SMP+K + IWG LL A ++H + E+G+ K
Sbjct: 377 PSMEHYGCMVDLMGRAGLLKEAREFIESMPVKPNAAIWGALLNACQLHKHFELGKEIGKI 436
Query: 616 LAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGVV 665
L L P H + L++IYA AG W +R +++ G+ PG S +
Sbjct: 437 LIELDPDHSGRYIHLASIYAAAGEWNQVVRVRSQIKHRGLLNHPGCSSIT 486
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 118/488 (24%), Positives = 210/488 (43%), Gaps = 69/488 (14%)
Query: 44 QIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRND 103
QIH + K G N ++L+ YA+ L++ A +
Sbjct: 28 QIHGQLLKKGTIRNQLTVSTLLVSYARIELVNLAYT------------------------ 63
Query: 104 RLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVIS 163
R VFD V + +M+ ++ ++ AL ++ M V N T ++
Sbjct: 64 -----RVVFDSISSPNTVIWNTMLRAYSNSNDPEAALLLYHQMLHNSVPHNSYTFPFLLK 118
Query: 164 SSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVS 223
+ L E + +H +IK V + +LL +Y + ++ A LF+++ R+IVS
Sbjct: 119 ACSALSAFEETQQIHAHIIKRGFGLEVYATNSLLRVYAISGNIQSAHVLFNQLPTRDIVS 178
Query: 224 WNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGI 283
WN+M++G+ K G +++A ++F+ +P K+V+SW TMI G++++ EAL++ + ML GI
Sbjct: 179 WNIMIDGYIKFGNLDMAYKIFQAMPEKNVISWTTMIVGFVRIGMHKEALSLLQQMLVAGI 238
Query: 284 APNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARL 343
P+ + + +SAC A +G IH+ I K + + Y CG + A L
Sbjct: 239 KPDSITLSCSLSACAGLGALEQGKWIHTYIEKNEIKIDPVLGCVLTDMYVKCGEMEKALL 298
Query: 344 QFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMA 403
F K + +W A+I G +G +A F MQK
Sbjct: 299 VFSKLEKKCVCAWTAIIGGLAIHGKGREALDWFTQMQK---------------------- 336
Query: 404 LELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLN-NSITLNDNLSAAIID 462
AG+ PN IT ++ A + +G +EG+ E + + +I + ++D
Sbjct: 337 ---------AGINPNSITFTAILTACSHAGLTEEGKSLFESMSSVYNIKPSMEHYGCMVD 387
Query: 463 MYAKCGSINTAFEVFYHIRDRTTSVSPWNAII--CGLAMHGD-----ANLTLKIYSDLEK 515
+ + G + A E F + + W A++ C L H + + +++ D
Sbjct: 388 LMGRAGLLKEARE-FIESMPVKPNAAIWGALLNACQLHKHFELGKEIGKILIELDPDHSG 446
Query: 516 RNIKLNSI 523
R I L SI
Sbjct: 447 RYIHLASI 454
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 97/353 (27%), Positives = 160/353 (45%), Gaps = 50/353 (14%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
L+ CSA A + QQIH+ I K G + NSL+ +YA G I A +F+ T D
Sbjct: 117 LKACSALSAFEETQQIHAHIIKRGFGLEVYATNSLLRVYAISGNIQSAHVLFNQLPTRDI 176
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
V+ NIMI GYI+ L+ A ++F P K +S+T+MI+GF + +EAL + + M +
Sbjct: 177 VSWNIMIDGYIKFGNLDMAYKIFQAMPEKNVISWTTMIVGFVRIGMHKEALSLLQQMLVA 236
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
G+ P+ +TL+ +S+ LG + + + +H + K I ++ L +MY C + +A
Sbjct: 237 GIKPDSITLSCSLSACAGLGALEQGKWIHTYIEKNEIKIDPVLGCVLTDMYVKCGEMEKA 296
Query: 210 RSLFDEMKERNIVSWNVMLNGFA-----------------------------------KA 234
+F +++++ + +W ++ G A A
Sbjct: 297 LLVFSKLEKKCVCAWTAIIGGLAIHGKGREALDWFTQMQKAGINPNSITFTAILTACSHA 356
Query: 235 GLVELARELFERIPS-----KDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVM 289
GL E + LFE + S + +G M+D + L EA +M + PN +
Sbjct: 357 GLTEEGKSLFESMSSVYNIKPSMEHYGCMVDLMGRAGLLKEAREFIESM---PVKPNAAI 413
Query: 290 IVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHF---YAACGRIN 339
L++AC F G +I I+++ D IH YAA G N
Sbjct: 414 WGALLNACQLHKHFELGKEIGKILIELDPDH----SGRYIHLASIYAAAGEWN 462
>gi|359489593|ref|XP_003633947.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Vitis vinifera]
Length = 512
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 170/428 (39%), Positives = 258/428 (60%), Gaps = 4/428 (0%)
Query: 237 VELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISA 296
+ A +LF+ IP V + +I Y + ++Y M G +PN+ L SA
Sbjct: 32 IPYAHKLFDFIPKPTVFLYNKLIQAYSSHGPHHQCFSLYTQMCLQGCSPNEHSFTFLFSA 91
Query: 297 CGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQF-ELGIKDHIAS 355
C + +G +H+ VK+GF C F ++ YA G ++LAR QF E+ ++D + +
Sbjct: 92 CASLSSHQQGRMLHTHFVKSGFGCDVFALTALVDMYAKLGLLSLARKQFDEMTVRD-VPT 150
Query: 356 WNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVD-AG 414
WN++IAG+ R G +E A +LF M R+V SW+AMISGYAQN Q AL +F M +
Sbjct: 151 WNSMIAGYARCGDLEGALELFRLMPARNVTSWTAMISGYAQNGQYAKALSMFLMMEEETE 210
Query: 415 VKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAF 474
++PNE+T+ SV A A+ G L+ G Y N N +S A+++MYA+CG I+ A+
Sbjct: 211 MRPNEVTLASVLPACANLGALEVGERIEVYARGNGYFKNLYVSNALLEMYARCGRIDKAW 270
Query: 475 EVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCH 534
VF I R S WN++I GLA+HG + ++++ + + + +TF+GVL C H
Sbjct: 271 GVFEEIDGRRNLCS-WNSMIMGLAVHGRCDEAIELFYKMLREGAAPDDVTFVGVLLACTH 329
Query: 535 AGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWG 594
G+V G+ +F+SM+ +++ P L+HYGCMVDLLGRAG+L +A ++I MPM+ D V+WG
Sbjct: 330 GGMVVEGQHFFESMERDFSIAPKLEHYGCMVDLLGRAGELREAHDLILRMPMEPDSVVWG 389
Query: 595 TLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCG 654
TLL A HG+VE+ E+AA +L L+PS+ + V+LSNIYA AGRW+ +RK M+
Sbjct: 390 TLLGACSFHGHVELAEKAAGALFELEPSNPGNYVILSNIYATAGRWDGVARLRKLMKGGK 449
Query: 655 MKRLPGFS 662
+ + G+S
Sbjct: 450 ITKAAGYS 457
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 106/404 (26%), Positives = 182/404 (45%), Gaps = 35/404 (8%)
Query: 108 AREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVH 167
A ++FD P Y +I ++ + + ++ M + G PNE + + S+
Sbjct: 35 AHKLFDFIPKPTVFLYNKLIQAYSSHGPHHQCFSLYTQMCLQGCSPNEHSFTFLFSACAS 94
Query: 168 LGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVM 227
L + RMLH +K V T L++MY L AR FDEM R++ +WN M
Sbjct: 95 LSSHQQGRMLHTHFVKSGFGCDVFALTALVDMYAKLGLLSLARKQFDEMTVRDVPTWNSM 154
Query: 228 LNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDG-IAPN 286
+ G+A+ G +E A ELF +P+++V SW MI GY Q + ++AL+M+ M + + PN
Sbjct: 155 IAGYARCGDLEGALELFRLMPARNVTSWTAMISGYAQNGQYAKALSMFLMMEEETEMRPN 214
Query: 287 DVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQF- 345
+V + ++ AC A G +I G+ ++ ++ YA CGRI+ A F
Sbjct: 215 EVTLASVLPACANLGALEVGERIEVYARGNGYFKNLYVSNALLEMYARCGRIDKAWGVFE 274
Query: 346 ELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALE 405
E+ + ++ SWN++I G +G ++ A+E
Sbjct: 275 EIDGRRNLCSWNSMIMGLAVHGRCDE-------------------------------AIE 303
Query: 406 LFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNN-SITLNDNLSAAIIDMY 464
LF+ M+ G P+++T V V A G + EG+ E + + SI ++D+
Sbjct: 304 LFYKMLREGAAPDDVTFVGVLLACTHGGMVVEGQHFFESMERDFSIAPKLEHYGCMVDLL 363
Query: 465 AKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLK 508
+ G + A ++ + SV W ++ + HG L K
Sbjct: 364 GRAGELREAHDLILRMPMEPDSVV-WGTLLGACSFHGHVELAEK 406
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 91/286 (31%), Positives = 138/286 (48%), Gaps = 42/286 (14%)
Query: 26 LVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCS 85
L SA S+H QG+ +H+ KSG + F +L+++YAK GL+S A+ FD +
Sbjct: 88 LFSACASLSSH---QQGRMLHTHFVKSGFGCDVFALTALVDMYAKLGLLSLARKQFDEMT 144
Query: 86 TLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRD 145
D N MI+GY R L A E+F P + S+T+MI G+AQN + +AL +F
Sbjct: 145 VRDVPTWNSMIAGYARCGDLEGALELFRLMPARNVTSWTAMISGYAQNGQYAKALSMFLM 204
Query: 146 M-RILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGF---VIISTNLLNMYC 201
M + PNEVTLASV+ + +LG + + + + +G+ + +S LL MY
Sbjct: 205 MEEETEMRPNEVTLASVLPACANLGAL---EVGERIEVYARGNGYFKNLYVSNALLEMYA 261
Query: 202 VCSSLVEARSLFDEMK-ERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMID 260
C + +A +F+E+ RN+ SWN M+ G A G
Sbjct: 262 RCGRIDKAWGVFEEIDGRRNLCSWNSMIMGLAVHG------------------------- 296
Query: 261 GYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEG 306
R EA+ ++ ML +G AP+DV V ++ AC EG
Sbjct: 297 ------RCDEAIELFYKMLREGAAPDDVTFVGVLLACTHGGMVVEG 336
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/300 (22%), Positives = 128/300 (42%), Gaps = 53/300 (17%)
Query: 349 IKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFH 408
+++ I LI ++ I A +LF+ + K V+ ++ +I Y+ + + L+
Sbjct: 12 LRNGIEHTKQLIVSLLQIPSIPYAHKLFDFIPKPTVFLYNKLIQAYSSHGPHHQCFSLYT 71
Query: 409 GMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCG 468
M G PNE + +F A AS + ++GR H + + + + A++DMYAK G
Sbjct: 72 QMCLQGCSPNEHSFTFLFSACASLSSHQQGRMLHTHFVKSGFGCDVFALTALVDMYAKLG 131
Query: 469 SINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNI---------- 518
++ A + F + R V WN++I G A GD L+++ + RN+
Sbjct: 132 LLSLARKQFDEMTVR--DVPTWNSMIAGYARCGDLEGALELFRLMPARNVTSWTAMISGY 189
Query: 519 ----------------------KLNSITFIGVLSTCCHAGLVDLGER---------YFKS 547
+ N +T VL C + G +++GER YFK+
Sbjct: 190 AQNGQYAKALSMFLMMEEETEMRPNEVTLASVLPACANLGALEVGERIEVYARGNGYFKN 249
Query: 548 MKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVE 607
+ V N ++++ R G+++ A V + + ++ W +++ +HG +
Sbjct: 250 LY-VSNA---------LLEMYARCGRIDKAWGVFEEIDGRRNLCSWNSMIMGLAVHGRCD 299
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 104/253 (41%), Gaps = 46/253 (18%)
Query: 8 SVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINL 67
S+F + + E+ L S L C+ A+ G++I +G N ++ N+L+ +
Sbjct: 200 SMFLMMEEETEMRPNEVTLASVLPACANLGALEVGERIEVYARGNGYFKNLYVSNALLEM 259
Query: 68 YAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMI 127
YA+CG I +A +F+ D R + S+ SMI
Sbjct: 260 YARCGRIDKAWGVFEEI----------------------DGR--------RNLCSWNSMI 289
Query: 128 MGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMID 187
MG A + EA+E+F M G P++VT V+ + H G + E + + M
Sbjct: 290 MGLAVHGRCDEAIELFYKMLREGAAPDDVTFVGVLLACTHGGMVVEGQHF----FESMER 345
Query: 188 GFVIISTNLLNMYCV------CSSLVEARSLFDEMK-ERNIVSWNVMLNGFAKAGLVELA 240
F I+ L + C+ L EA L M E + V W +L + G VELA
Sbjct: 346 DFS-IAPKLEHYGCMVDLLGRAGELREAHDLILRMPMEPDSVVWGTLLGACSFHGHVELA 404
Query: 241 RE----LFERIPS 249
+ LFE PS
Sbjct: 405 EKAAGALFELEPS 417
>gi|359476084|ref|XP_002282081.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Vitis vinifera]
Length = 541
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 181/504 (35%), Positives = 282/504 (55%), Gaps = 28/504 (5%)
Query: 175 RMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKA 234
R L L I+ M D FV I N C ++VE + + +IV +++ + F
Sbjct: 3 RKLRALKIREMEDIFVPILKN-------CPNIVELKKI-----HAHIVKFSLSQSSFLVT 50
Query: 235 GLV---------ELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLC----- 280
+V E A LF+R+ + + MI Y + A+T+Y+ ML
Sbjct: 51 KMVDVCNHHAETEYANLLFKRVADPNAFLYNAMIRAYKHNKVYVLAITVYKQMLGHSHGE 110
Query: 281 DGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINL 340
+ I P+ ++ +C M + G Q+H + K G ++ +++ Y C ++
Sbjct: 111 NPIFPDKFTFPFVVKSCAGLMCYDLGKQVHGHVFKFGQKSNTVVENSLVEMYVKCDSLDD 170
Query: 341 ARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQP 400
A FE + SWN LI+G +R G + AR +F MQ + ++SW+A++SGYA+
Sbjct: 171 AHKVFEEMTERDAVSWNTLISGHVRLGQMRRARAIFEEMQDKTIFSWTAIVSGYARIGCY 230
Query: 401 NMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAI 460
ALE F M G++P+EI++VSV A A G L+ G+W H Y N + A+
Sbjct: 231 ADALEFFRRMQMVGIEPDEISLVSVLPACAQLGALELGKWIHFYADKAGFLRNICVCNAL 290
Query: 461 IDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKL 520
I+MYAKCGSI+ +F + +R V W+ +I GLA HG A+ ++++ +++K I+
Sbjct: 291 IEMYAKCGSIDEGRRLFDQMNER--DVISWSTMIVGLANHGRAHEAIELFQEMQKAKIEP 348
Query: 521 NSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEV 580
N ITF+G+LS C HAGL++ G RYF+SMK YN+EP ++HYGC+V+LLG +G+L+ A E+
Sbjct: 349 NIITFVGLLSACAHAGLLNEGLRYFESMKRDYNIEPGVEHYGCLVNLLGLSGRLDQALEL 408
Query: 581 IRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRW 640
I+ MPMK D IWG+LL++ R H N+E+ A + L L+P+ + VLLSN+YAD G+W
Sbjct: 409 IKKMPMKPDSAIWGSLLSSCRSHSNLEIAVIAMEHLLELEPADTGNYVLLSNLYADLGKW 468
Query: 641 EDAFSIRKEMRDCGMKRLPGFSGV 664
+ +RK MR MK+ PG S +
Sbjct: 469 DGVSRMRKLMRSKSMKKTPGCSSI 492
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 95/338 (28%), Positives = 172/338 (50%), Gaps = 41/338 (12%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
++ C+ + G+Q+H +FK G +SNT ++NSL+ +Y KC + A +F+ + D
Sbjct: 124 VKSCAGLMCYDLGKQVHGHVFKFGQKSNTVVENSLVEMYVKCDSLDDAHKVFEEMTERDA 183
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
V+ N +ISG++R ++ AR +F++ K S+T+++ G+A+ C+ +ALE FR M+++
Sbjct: 184 VSWNTLISGHVRLGQMRRARAIFEEMQDKTIFSWTAIVSGYARIGCYADALEFFRRMQMV 243
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
G+ P+E++L SV+ + LG + + +H K + + L+ MY C S+ E
Sbjct: 244 GIEPDEISLVSVLPACAQLGALELGKWIHFYADKAGFLRNICVCNALIEMYAKCGSIDEG 303
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLS 269
R LFD+M ER+++SW+ M+ G A G R
Sbjct: 304 RRLFDQMNERDVISWSTMIVGLANHG-------------------------------RAH 332
Query: 270 EALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSII-----VKAGFDCYDFI 324
EA+ +++ M I PN + V L+SAC A EGL+ + ++ G + Y
Sbjct: 333 EAIELFQEMQKAKIEPNIITFVGLLSACAHAGLLNEGLRYFESMKRDYNIEPGVEHY--- 389
Query: 325 QATIIHFYAACGRINLA-RLQFELGIKDHIASWNALIA 361
+++ GR++ A L ++ +K A W +L++
Sbjct: 390 -GCLVNLLGLSGRLDQALELIKKMPMKPDSAIWGSLLS 426
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 100/243 (41%), Gaps = 72/243 (29%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E++LVS L C+ A+ G+ IH K+G N + N+LI +YAKCG I + + +FD
Sbjct: 249 EISLVSVLPACAQLGALELGKWIHFYADKAGFLRNICVCNALIEMYAKCGSIDEGRRLFD 308
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+ D ++ + MI G + R + EA+E+
Sbjct: 309 QMNERDVISWSTMIVGLANHGRAH-------------------------------EAIEL 337
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
F++M+ + PN +T ++S+ H G LLN
Sbjct: 338 FQEMQKAKIEPNIITFVGLLSACAHAG--------------------------LLN---- 367
Query: 203 CSSLVEARSLFDEMK-----ERNIVSWNVMLNGFAKAGLVELARELFERIPSK-DVVSWG 256
E F+ MK E + + ++N +G ++ A EL +++P K D WG
Sbjct: 368 -----EGLRYFESMKRDYNIEPGVEHYGCLVNLLGLSGRLDQALELIKKMPMKPDSAIWG 422
Query: 257 TMI 259
+++
Sbjct: 423 SLL 425
>gi|296082505|emb|CBI21510.3| unnamed protein product [Vitis vinifera]
Length = 746
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 209/689 (30%), Positives = 337/689 (48%), Gaps = 136/689 (19%)
Query: 45 IHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDR 104
IH I SGL+S+TF+ N LIN+ CS ++DR
Sbjct: 71 IHGQIIVSGLQSDTFLANILINV----------------CS---------------KSDR 99
Query: 105 LNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDM-RILGVIPNEVTLASVIS 163
+++AR VFDK P K ++++SM+ ++Q EAL VF D+ R G PNE LASVI
Sbjct: 100 VDNARVVFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIR 159
Query: 164 SSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEAR------------- 210
+ LG + + LHG V++ D V + T+L++ Y ++ EAR
Sbjct: 160 ACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVT 219
Query: 211 ------------------SLFDEMKERNIVS----------------------------- 223
LF +M+E N+V
Sbjct: 220 WTTIIAGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVL 279
Query: 224 ----------WNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALT 273
NV+++ + K V+ R+LF+++ K+++SW TMI GY+Q EA+
Sbjct: 280 RRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMK 339
Query: 274 MYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYA 333
++ M G P+ ++++CG A +G Q+H+ +KA + +F++ +I YA
Sbjct: 340 LFGEMNRLGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLIDMYA 399
Query: 334 ACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISG 393
++ ++ DA+++F+ M +++V S++AMI G
Sbjct: 400 -------------------------------KSNLLIDAKKVFDVMAEQNVISYNAMIEG 428
Query: 394 YAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLN 453
Y+ E+ + ALELFH M KPNE T ++ A ++ +L+ G+ H ++ +
Sbjct: 429 YSSQEKLSEALELFHEMRVRLQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFC 488
Query: 454 DNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDL 513
++ A++DMYAKCGSI A ++F R V WN++I A HG+A L ++ ++
Sbjct: 489 PFVTNALVDMYAKCGSIEEARKMFNSSIWR--DVVCWNSMISTHAQHGEAEEALGMFREM 546
Query: 514 EKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQ 573
K I+ N +TF+ VLS C HAG V+ G +F SM + ++P +HY C+V LLGR+G+
Sbjct: 547 MKEGIQPNYVTFVAVLSACSHAGRVEDGLNHFNSMPG-FGIKPGTEHYACVVSLLGRSGK 605
Query: 574 LEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNI 633
L +A+E I MP++ ++W +LL+A RI GNVE+G+ AA+ P S +LLSNI
Sbjct: 606 LFEAKEFIEKMPIEPAAIVWRSLLSACRIAGNVELGKYAAEMAISTDPKDSGSYILLSNI 665
Query: 634 YADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
+A G W D +R M + + PG S
Sbjct: 666 FASKGMWADVKKVRDRMDSSEVVKEPGRS 694
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 105/397 (26%), Positives = 176/397 (44%), Gaps = 99/397 (24%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
A S L C + A+ QG+Q+H+ K+ LES+ F++N LI++YAK L+ AK +FD
Sbjct: 354 FACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDV 413
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
+ + ++ N MI GY ++L+ EALE+F
Sbjct: 414 MAEQNVISYNAMIEGYSSQEKLS-------------------------------EALELF 442
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
+MR+ PNE T A++I+++ +L + + H ++K+ +D ++ L++MY C
Sbjct: 443 HEMRVRLQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKC 502
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYL 263
S+ EAR +F+ R++V WN M++ A+ G E
Sbjct: 503 GSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAE------------------------- 537
Query: 264 QVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQ--------------- 308
EAL M+R M+ +GI PN V V ++SAC A +GL
Sbjct: 538 ------EALGMFREMMKEGIQPNYVTFVAVLSACSHAGRVEDGLNHFNSMPGFGIKPGTE 591
Query: 309 ----IHSIIVKAG--FDCYDFIQATIIH--------FYAAC---GRINLARLQFELGI-- 349
+ S++ ++G F+ +FI+ I +AC G + L + E+ I
Sbjct: 592 HYACVVSLLGRSGKLFEAKEFIEKMPIEPAAIVWRSLLSACRIAGNVELGKYAAEMAIST 651
Query: 350 --KDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDV 384
KD S+ L F GM D +++ + M +V
Sbjct: 652 DPKDS-GSYILLSNIFASKGMWADVKKVRDRMDSSEV 687
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/439 (20%), Positives = 185/439 (42%), Gaps = 64/439 (14%)
Query: 146 MRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSS 205
++I + P A+++ S+ I +++HG +I + ++ L+N+
Sbjct: 40 LQIPNLRPKRREFANLLQLSISRNPIIHYKIIHGQIIVSGLQSDTFLANILINVCSKSDR 99
Query: 206 LVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQV 265
+ AR +FD+M +N+++W+ M++ +++ G E A +F + K
Sbjct: 100 VDNARVVFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRK--------------- 144
Query: 266 ERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQ 325
G PN+ ++ +I AC + +G Q+H +V++GFD ++
Sbjct: 145 ---------------SGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVG 189
Query: 326 ATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVY 385
++I FY+ G I ARL F+ + +W +IAG+ + G
Sbjct: 190 TSLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTIIAGYTKCG------------------ 231
Query: 386 SWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYV 445
+ ++LELF M + V P+ + SV A + L+ G+ H YV
Sbjct: 232 -------------RSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYV 278
Query: 446 LNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANL 505
L ++ ++ +ID Y KC + ++F + ++ W +I G +
Sbjct: 279 LRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQM--VVKNIISWTTMISGYMQNSFDWE 336
Query: 506 TLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMV 565
+K++ ++ + K + VL++C ++ G R + N+E D ++
Sbjct: 337 AMKLFGEMNRLGWKPDGFACTSVLTSCGSREALEQG-RQVHAYTIKANLESDEFVKNGLI 395
Query: 566 DLLGRAGQLEDAEEVIRSM 584
D+ ++ L DA++V M
Sbjct: 396 DMYAKSNLLIDAKKVFDVM 414
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 112/256 (43%), Gaps = 41/256 (16%)
Query: 9 VFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLY 68
+F+ + LQ + E + + S ++ GQQ H+ + K GL+ F+ N+L+++Y
Sbjct: 441 LFHEMRVRLQKPN-EFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMY 499
Query: 69 AKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIM 128
AKCG I +A+ MF+S D V N MIS +
Sbjct: 500 AKCGSIEEARKMFNSSIWRDVVCWNSMISTH----------------------------- 530
Query: 129 GFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLG----GIWECRMLHGLVIKL 184
AQ+ EAL +FR+M G+ PN VT +V+S+ H G G+ + G IK
Sbjct: 531 --AQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACSHAGRVEDGLNHFNSMPGFGIKP 588
Query: 185 MIDGFVIISTNLLNMYCVCSSLVEARSLFDEMK-ERNIVSWNVMLNGFAKAGLVELAREL 243
+ + + +++ L EA+ ++M E + W +L+ AG VEL +
Sbjct: 589 GTEHYACV----VSLLGRSGKLFEAKEFIEKMPIEPAAIVWRSLLSACRIAGNVELGKYA 644
Query: 244 FERIPSKDVVSWGTMI 259
E S D G+ I
Sbjct: 645 AEMAISTDPKDSGSYI 660
>gi|147834283|emb|CAN67492.1| hypothetical protein VITISV_035978 [Vitis vinifera]
Length = 814
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 202/656 (30%), Positives = 330/656 (50%), Gaps = 87/656 (13%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKC--------GLISQAKSM- 80
L+ CS+ G QIH L K G + + ++L+++YAKC G + K M
Sbjct: 165 LKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCCVQNDDLRGGLELFKEMQ 224
Query: 81 -------------FDSCSTLDPVACNIMISGYIRNDRLND-AREVFDKTPIKCCVSYTSM 126
+ D V + Y++ + L+D + ++F+ P SY ++
Sbjct: 225 KAGVGALQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDCSNQLFNSLPNHNLQSYNAI 284
Query: 127 IMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMI 186
I+G+A++D EAL +FR ++ G+ +EV+L+ + + G E +HGL +K +
Sbjct: 285 IVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAXRACAVIKGDLEGLQVHGLSMKSLC 344
Query: 187 DGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFER 246
+ ++ +L+MY C +LVE A LV FE
Sbjct: 345 QSNICVANAILDMYGKCGALVE-------------------------ACLV------FEE 373
Query: 247 IPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEG 306
+ S+D VSW +I + Q + L+++ ML G+ P++ ++ AC A G
Sbjct: 374 MVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCG 433
Query: 307 LQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRN 366
++IH+ I+K+ F+ +I Y+ CG
Sbjct: 434 MEIHNRIIKSRMGLDSFVGIALIDMYSKCG------------------------------ 463
Query: 367 GMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVF 426
M+E A +L + + ++ V SW+A+ISG++ +Q A + F M++ GV P+ T ++
Sbjct: 464 -MMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATIL 522
Query: 427 CAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTS 486
A+ T++ G+ H ++ + + +S+ ++DMY+KCG++ +F +R
Sbjct: 523 DTCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNR--D 580
Query: 487 VSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFK 546
WNA++CG A HG LKI+ ++ N+K N TF+ VL C H GLV+ G YF
Sbjct: 581 FVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFH 640
Query: 547 SMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNV 606
SM S Y ++P L+HY C+VD++GR+GQ+ A E+I MP +AD VIW TLL+ +IHGNV
Sbjct: 641 SMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSXCKIHGNV 700
Query: 607 EVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
EV E+AA S+ L+P + VLLSNIYA+AG W + +RK MR G+K+ PG S
Sbjct: 701 EVAEKAAYSILQLEPEDSAAYVLLSNIYANAGMWNEVTKLRKMMRFNGLKKEPGCS 756
Score = 196 bits (497), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 160/628 (25%), Positives = 274/628 (43%), Gaps = 94/628 (14%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
+ CS A+ G+Q H+ + + + F+ N LI +Y KC + A +FD D
Sbjct: 49 FQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLGFAFKVFDGMPQRDT 108
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRI- 148
V+ N M+ GY + A+++FD P C +E+F D R+
Sbjct: 109 VSWNAMLFGYAGRGDIGVAQKLFDAMPGTGC-----------------GVVELF-DFRMG 150
Query: 149 -LGVIPNEVTLASVISSSV----HLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
+G + + T A V+ S H GGI +HGL +K+ D V+ + LL+MY C
Sbjct: 151 RMGTVFDRTTFAVVLKSCSSLEDHGGGI----QIHGLAVKMGFDCDVVTGSALLDMYAKC 206
Query: 204 ----SSLVEARSLFDEMKE------------------RNIVSWNVMLNGFAKAG-LVELA 240
L LF EM++ ++V L+ + K L + +
Sbjct: 207 CVQNDDLRGGLELFKEMQKAGVGALQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDCS 266
Query: 241 RELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRA 300
+LF +P+ ++ S+ +I GY + ++ EAL M+R + G+ ++V + AC
Sbjct: 267 NQLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAXRACAVI 326
Query: 301 MAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALI 360
EGLQ+H + +K+ + I+ Y CG + A L FE
Sbjct: 327 KGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFE-------------- 372
Query: 361 AGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEI 420
M RD SW+A+I+ + QN L LF M+ +G++P+E
Sbjct: 373 -----------------EMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEF 415
Query: 421 TMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHI 480
T SV A A L G H ++ + + L+ + A+IDMY+KCG + A ++ H
Sbjct: 416 TYGSVLKACAGWQALNCGMEIHNRIIKSRMGLDSFVGIALIDMYSKCGMMEKAEKL--HD 473
Query: 481 RDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDL 540
R +V WNAII G ++ + K +S + + + ++ T+ +L TC + V+L
Sbjct: 474 RLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVEL 533
Query: 541 GERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAAS 600
G++ + ++ D +VD+ + G ++D + + P + D V W ++
Sbjct: 534 GKQIHAQIIK-KELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNR-DFVTWNAMVCGY 591
Query: 601 RIHGNVEVGERAAK-----SLAGLQPSH 623
HG +GE A K L ++P+H
Sbjct: 592 AQHG---LGEEALKIFEYMQLENVKPNH 616
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 113/497 (22%), Positives = 210/497 (42%), Gaps = 102/497 (20%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E++L A R C+ +G Q+H L KS +SN + N+++++Y KCG + +A +F+
Sbjct: 313 EVSLSGAXRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFE 372
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+ D V+ N +I+ + QN + L +
Sbjct: 373 EMVSRDAVSWNAIIAAH-------------------------------EQNGNEEKTLSL 401
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRM-LHGLVIK--LMIDGFVIISTNLLNM 199
F M G+ P+E T SV+ + + C M +H +IK + +D FV I+ L++M
Sbjct: 402 FVWMLQSGMEPDEFTYGSVLKACAGWQAL-NCGMEIHNRIIKSRMGLDSFVGIA--LIDM 458
Query: 200 YCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMI 259
Y C + +A L D + E+ +VSWN +++GF+ E A++ F +
Sbjct: 459 YSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSK------------- 505
Query: 260 DGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFD 319
ML G+ P++ ++ C + G QIH+ I+K
Sbjct: 506 ------------------MLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQ 547
Query: 320 CYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNM 379
+I +T++ Y+ CG + +L FE +WNA++ G+ ++G+ E+A ++F M
Sbjct: 548 SDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYM 607
Query: 380 QKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG- 438
Q + VKPN T ++V A G +++G
Sbjct: 608 QLEN-------------------------------VKPNHATFLAVLRACGHMGLVEKGL 636
Query: 439 RWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLA 498
+ H + N + + ++D+ + G ++ A E+ + +V W ++
Sbjct: 637 HYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVI-WRTLLSXCK 695
Query: 499 MHGDANLTLK-IYSDLE 514
+HG+ + K YS L+
Sbjct: 696 IHGNVEVAEKAAYSILQ 712
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 75/355 (21%), Positives = 146/355 (41%), Gaps = 46/355 (12%)
Query: 293 LISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDH 352
+ C A G Q H+ ++ F F+ +I Y C + A F+ +
Sbjct: 48 IFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLGFAFKVFDGMPQRD 107
Query: 353 IASWNALIAGFIRNGMIEDARQLFNNMQKR-------------------DVYSWSAMISG 393
SWNA++ G+ G I A++LF+ M D +++ ++
Sbjct: 108 TVSWNAMLFGYAGRGDIGVAQKLFDAMPGTGCGVVELFDFRMGRMGTVFDRTTFAVVLKS 167
Query: 394 YAQNEQPNMALELFHGM-VDAGVKPNEITMVSVF-----CAIASSG------TLKEGRWA 441
+ E +++ HG+ V G + +T ++ C + + KE + A
Sbjct: 168 CSSLEDHGGGIQI-HGLAVKMGFDCDVVTGSALLDMYAKCCVQNDDLRGGLELFKEMQKA 226
Query: 442 -------HEYVLNNSITLNDNLSAAIIDMYAKCGSI-NTAFEVFYHIRDRTTSVSPWNAI 493
H + L + + A +DMY KC ++ + + ++F + + ++ +NAI
Sbjct: 227 GVGALQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDCSNQLFNSLPNH--NLQSYNAI 284
Query: 494 ICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCH-AGLVDLGERYFKSMKSVY 552
I G A L ++ L+K + L+ ++ G C G ++ + + SMKS+
Sbjct: 285 IVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAXRACAVIKGDLEGLQVHGLSMKSL- 343
Query: 553 NVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVE 607
+ ++ ++D+ G+ G L +A V M + D V W ++AA +GN E
Sbjct: 344 -CQSNICVANAILDMYGKCGALVEACLVFEEM-VSRDAVSWNAIIAAHEQNGNEE 396
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 2/90 (2%)
Query: 421 TMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHI 480
T +F + L G+ AH ++ ++ +I MY KC + AF+VF +
Sbjct: 44 TFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLGFAFKVFDGM 103
Query: 481 RDRTTSVSPWNAIICGLAMHGDANLTLKIY 510
R T WNA++ G A GD + K++
Sbjct: 104 PQRDT--VSWNAMLFGYAGRGDIGVAQKLF 131
>gi|296082276|emb|CBI21281.3| unnamed protein product [Vitis vinifera]
Length = 785
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 195/658 (29%), Positives = 330/658 (50%), Gaps = 73/658 (11%)
Query: 45 IHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDR 104
I + I K+G + +T N + + K G +SQA+ +F+ + V+ N+MISGY+++
Sbjct: 34 IDARIVKTGFDPDTSRSNFRVGNFLKNGELSQARQLFEKMPHKNTVSTNMMISGYVKSGN 93
Query: 105 LNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVIS- 163
L +AR++FD + V++T +I G++Q + ++EA E+F M+ G P+ VT +++S
Sbjct: 94 LGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSG 153
Query: 164 -SSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKE---- 218
+ +G + + +IKL D +I+ L++ YC + L A LF EM E
Sbjct: 154 CNGHEMGN--QITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPEIDSF 211
Query: 219 --------------------------RNIVSWNV-----MLNGFAKAGLVELARELFERI 247
+ WNV +L+ ++K V AR+LF+ +
Sbjct: 212 TFAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEM 271
Query: 248 PSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGL 307
P +D VS+ +I GY + A ++R + ++S + + G
Sbjct: 272 PEQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGR 331
Query: 308 QIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNG 367
QIH+ + D + +++ YA CG+
Sbjct: 332 QIHAQTIVTTADSEILVGNSLVDMYAKCGKF----------------------------- 362
Query: 368 MIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFC 427
E+A +F N+ R W+AMIS Y Q L+LF+ M A V ++ T S+
Sbjct: 363 --EEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLR 420
Query: 428 AIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSV 487
A AS +L G+ H +++ + N +A++D+YAKCGSI A + F + DR ++
Sbjct: 421 ASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDR--NI 478
Query: 488 SPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKS 547
WNA+I A +G+A TLK + ++ ++ +S++F+GVLS C H+GLV+ G +F S
Sbjct: 479 VSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLVEEGLWHFNS 538
Query: 548 MKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVE 607
M +Y ++P +HY +VD+L R+G+ +AE+++ MP+ D ++W ++L A RIH N E
Sbjct: 539 MTQIYKLDPRREHYASVVDMLCRSGRFNEAEKLMAEMPIDPDEIMWSSVLNACRIHKNQE 598
Query: 608 VGERAAKSLAGLQP-SHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
+ RAA L ++ V +SNIYA AG+WE+ + K MRD G+K+LP +S V
Sbjct: 599 LARRAADQLFNMEELRDAAPYVNMSNIYAAAGQWENVSKVHKAMRDRGVKKLPAYSWV 656
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 113/270 (41%), Gaps = 43/270 (15%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
+ S LR ++ ++S G+Q+HS I KSG SN F ++L+++YAKCG I A F
Sbjct: 412 QATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQ 471
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+ V+ N MIS Y AQN L+
Sbjct: 472 EMPDRNIVSWNAMISAY-------------------------------AQNGEAEATLKS 500
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLG----GIWECRMLHGLVIKLMIDGFVIISTNLLN 198
F++M + G+ P+ V+ V+S+ H G G+W + + +D ++++
Sbjct: 501 FKEMVLSGLQPDSVSFLGVLSACSHSGLVEEGLWH---FNSMTQIYKLDPRREHYASVVD 557
Query: 199 MYCVCSSLVEARSLFDEMK-ERNIVSWNVMLNGFAKAGLVELAR----ELFERIPSKDVV 253
M C EA L EM + + + W+ +LN ELAR +LF +D
Sbjct: 558 MLCRSGRFNEAEKLMAEMPIDPDEIMWSSVLNACRIHKNQELARRAADQLFNMEELRDAA 617
Query: 254 SWGTMIDGYLQVERLSEALTMYRAMLCDGI 283
+ M + Y + +++AM G+
Sbjct: 618 PYVNMSNIYAAAGQWENVSKVHKAMRDRGV 647
>gi|125527050|gb|EAY75164.1| hypothetical protein OsI_03056 [Oryza sativa Indica Group]
Length = 669
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 196/626 (31%), Positives = 317/626 (50%), Gaps = 97/626 (15%)
Query: 40 SQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGY 99
S G IH+L+ + G S+ F+ + L+N Y G
Sbjct: 138 SNGDAIHALVRRIGFTSDVFVMSGLVNYY-----------------------------GA 168
Query: 100 IRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLA 159
R+ + +A +VF++ + VS+TSMI AQ W + L++ +M+ G+IPN+VT+
Sbjct: 169 FRS--VKEASKVFEEMYERDVVSWTSMISACAQCGHWDKVLKMLSEMQAEGIIPNKVTII 226
Query: 160 SVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKER 219
S++S+ + E R ++ V K I+ V I L++MY C L +A
Sbjct: 227 SLLSACGQTQAVDEGRWVYNQVGKFGIEADVDIRNALISMYTKCGCLSDAL--------- 277
Query: 220 NIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAML 279
E F+ +P++ SW T+IDG++Q EAL ++ ML
Sbjct: 278 ----------------------EAFQAMPARYTKSWNTLIDGFVQNHEHKEALRIFEEML 315
Query: 280 CDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRIN 339
G+ P+ + +V ++SAC + +G+ +HS I G C + + ++I+ YA CG +
Sbjct: 316 LHGVTPDGITLVSVLSACAQLGELRKGMHVHSYIKDNGICCDNILTNSLINMYAKCGDM- 374
Query: 340 LARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQ 399
A ++F M K+DV SW+ M+ GY + Q
Sbjct: 375 ------------------------------AAAERVFQTMTKKDVVSWTVMVCGYVKGHQ 404
Query: 400 PNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAA 459
MA LF M A V +E+ +VS+ A + G L +GR H Y+ ++ + L +A
Sbjct: 405 FTMAFNLFEEMKIAEVVAHEMALVSLLSACSQLGALDKGREIHSYIEEMNVAKDLCLESA 464
Query: 460 IIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSD-LEKRNI 518
++DMYAKCG I+TA E+F ++ + T WNA+I GLA +G ++++ LE ++
Sbjct: 465 LVDMYAKCGCIDTASEIFRKMQHKQTL--SWNAMIGGLASNGYGKEAVELFDQMLELQDP 522
Query: 519 KLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAE 578
K + IT VL C H G+VD G RYF M S+ V PD +HYGC+VDLLGRAG L++A
Sbjct: 523 KPDGITLKAVLGACAHVGMVDEGLRYFYLMSSL-GVVPDTEHYGCIVDLLGRAGMLDEAF 581
Query: 579 EVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAG 638
I+ MP++ + VIWG+LLAA R+H +++G+ + + + P+ VL+SN++A+
Sbjct: 582 HFIKKMPIEPNPVIWGSLLAACRVHHRMDLGKVIGQHIVNVAPNDVGVHVLVSNLHAEES 641
Query: 639 RWEDAFSIRKEMRDCGMKRLPGFSGV 664
+W+D +R M G+++ PG S V
Sbjct: 642 QWDDVEHVRGLMGSRGIEKTPGHSSV 667
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 159/579 (27%), Positives = 254/579 (43%), Gaps = 104/579 (17%)
Query: 26 LVSALRYCS--AHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
L++ L C+ AH+A ++H + ++ L S++F+ LI L A
Sbjct: 20 LLAYLDACASRAHLA-----ELHGRLVRAHLTSDSFVAGRLIALLAS------------- 61
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
P A R+D + AR+VFD + MI G++ + R+AL VF
Sbjct: 62 -----PAA---------RHD-MRYARKVFDGMAQPNAFVWNCMIRGYSSCEAPRDALAVF 106
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGI-WECR--MLHGLVIKLMIDGFVIISTNLLNMY 200
R+MR GV P+ T+A+V+S+S G+ W +H LV ++ V + + L+N Y
Sbjct: 107 REMRRRGVSPDNYTMAAVVSASAAFAGLKWRSNGDAIHALVRRIGFTSDVFVMSGLVNYY 166
Query: 201 CVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMID 260
S+ EA +F+EM ER DVVSW +MI
Sbjct: 167 GAFRSVKEASKVFEEMYER-------------------------------DVVSWTSMIS 195
Query: 261 GYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDC 320
Q + L M M +GI PN V I+ L+SACG+ A EG +++ + K G +
Sbjct: 196 ACAQCGHWDKVLKMLSEMQAEGIIPNKVTIISLLSACGQTQAVDEGRWVYNQVGKFGIEA 255
Query: 321 YDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ 380
I+ +I Y CG ++ A F+ + SWN LI GF+
Sbjct: 256 DVDIRNALISMYTKCGCLSDALEAFQAMPARYTKSWNTLIDGFV---------------- 299
Query: 381 KRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRW 440
QN + AL +F M+ GV P+ IT+VSV A A G L++G
Sbjct: 300 ---------------QNHEHKEALRIFEEMLLHGVTPDGITLVSVLSACAQLGELRKGMH 344
Query: 441 AHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMH 500
H Y+ +N I ++ L+ ++I+MYAKCG + A VF + + V W ++CG
Sbjct: 345 VHSYIKDNGICCDNILTNSLINMYAKCGDMAAAERVFQTMTKK--DVVSWTVMVCGYVKG 402
Query: 501 GDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKH 560
+ ++ +++ + + + + +LS C G +D G R S NV DL
Sbjct: 403 HQFTMAFNLFEEMKIAEVVAHEMALVSLLSACSQLGALDKG-REIHSYIEEMNVAKDLCL 461
Query: 561 YGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAA 599
+VD+ + G ++ A E+ R M K + W ++
Sbjct: 462 ESALVDMYAKCGCIDTASEIFRKMQHK-QTLSWNAMIGG 499
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 117/485 (24%), Positives = 209/485 (43%), Gaps = 97/485 (20%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
++ ++S L C AV +G+ +++ + K G+E++ I+N+LI++Y KCG +S A F
Sbjct: 222 KVTIISLLSACGQTQAVDEGRWVYNQVGKFGIEADVDIRNALISMYTKCGCLSDALEAFQ 281
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+ + N +I G++ QN +EAL +
Sbjct: 282 AMPARYTKSWNTLIDGFV-------------------------------QNHEHKEALRI 310
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
F +M + GV P+ +TL SV+S+ LG + + +H + I I++ +L+NMY
Sbjct: 311 FEEMLLHGVTPDGITLVSVLSACAQLGELRKGMHVHSYIKDNGICCDNILTNSLINMYAK 370
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
C + A +F M ++++VSW VM+ G+ K +A LFE + +VV+
Sbjct: 371 CGDMAAAERVFQTMTKKDVVSWTVMVCGYVKGHQFTMAFNLFEEMKIAEVVA-------- 422
Query: 263 LQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD 322
+++ +V L+SAC + A +G +IHS I +
Sbjct: 423 -----------------------HEMALVSLLSACSQLGALDKGREIHSYIEEMNVAKDL 459
Query: 323 FIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKR 382
+++ ++ YA CG I+ A F SWNA+I G NG ++A +LF+ M
Sbjct: 460 CLESALVDMYAKCGCIDTASEIFRKMQHKQTLSWNAMIGGLASNGYGKEAVELFDQM--- 516
Query: 383 DVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAH 442
LEL KP+ IT+ +V A A G + EG
Sbjct: 517 ---------------------LEL------QDPKPDGITLKAVLGACAHVGMVDEGLRYF 549
Query: 443 EYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSP--WNAIICGLAMH 500
+ + + + I+D+ + G ++ E F+ I+ +P W +++ +H
Sbjct: 550 YLMSSLGVVPDTEHYGCIVDLLGRAGMLD---EAFHFIKKMPIEPNPVIWGSLLAACRVH 606
Query: 501 GDANL 505
+L
Sbjct: 607 HRMDL 611
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 71/138 (51%), Gaps = 5/138 (3%)
Query: 22 YELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMF 81
+E+ALVS L CS A+ +G++IHS I + + + ++++L+++YAKCG I A +F
Sbjct: 423 HEMALVSLLSACSQLGALDKGREIHSYIEEMNVAKDLCLESALVDMYAKCGCIDTASEIF 482
Query: 82 DSCSTLDPVACNIMISGYIRNDRLNDAREVFDKT-----PIKCCVSYTSMIMGFAQNDCW 136
++ N MI G N +A E+FD+ P ++ +++ A
Sbjct: 483 RKMQHKQTLSWNAMIGGLASNGYGKEAVELFDQMLELQDPKPDGITLKAVLGACAHVGMV 542
Query: 137 REALEVFRDMRILGVIPN 154
E L F M LGV+P+
Sbjct: 543 DEGLRYFYLMSSLGVVPD 560
>gi|414587348|tpg|DAA37919.1| TPA: hypothetical protein ZEAMMB73_411767 [Zea mays]
Length = 920
Score = 323 bits (827), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 198/641 (30%), Positives = 313/641 (48%), Gaps = 95/641 (14%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+ + S L C++ + +G+Q+HS + K+G+ + + SL++LY KCG I A +F+
Sbjct: 246 VTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFN- 304
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
DR N V + M++ + Q ++ E+F
Sbjct: 305 -----------------LGDRTN-------------VVLWNLMLVAYGQISDLAKSFEIF 334
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
M+ G+ PN+ T ++ + G I +H L IK + + +S L++MY
Sbjct: 335 GQMQATGIHPNKFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMY--- 391
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYL 263
+K ++ AR++ E + +DVVSW +MI GY+
Sbjct: 392 ----------------------------SKYRCLDKARKILEMLEKRDVVSWTSMIAGYV 423
Query: 264 QVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDF 323
Q + EAL ++ M G+ P+++ + SAC A +GLQIH+ + +G
Sbjct: 424 QHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSG------ 477
Query: 324 IQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRD 383
YAA I+ WN L+ + R G E+A LF + +D
Sbjct: 478 --------YAA-----------------DISIWNTLVNLYARCGRSEEAFSLFREIDHKD 512
Query: 384 VYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHE 443
+W+ +ISG+ Q+ AL +F M AG K N T +S A+A+ +K+G+ H
Sbjct: 513 EITWNGLISGFGQSRLYEQALMVFMKMSQAGAKYNVFTFISAISALANLADIKQGKQVHG 572
Query: 444 YVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDA 503
+ T ++ A+I +Y KCGSI A +F + R WN II + HG
Sbjct: 573 RAVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNEV--SWNTIITSCSQHGRG 630
Query: 504 NLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGC 563
L ++ +++ +K N +TFIGVL+ C H GLV+ G YFKSM +VY + P HY C
Sbjct: 631 LEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSNVYGLNPIPDHYAC 690
Query: 564 MVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSH 623
+VD+LGRAGQL+ A + MP+ A+ +IW TLL+A ++H N+E+GE AAK L L+P
Sbjct: 691 VVDILGRAGQLDRARRFVDEMPITANAMIWRTLLSACKVHKNIEIGELAAKHLLELEPHD 750
Query: 624 GPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
S VLLSN YA G+W + +RK M+D G+++ PG S +
Sbjct: 751 SASYVLLSNAYAVTGKWANRDQVRKMMKDRGIRKEPGRSWI 791
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 125/463 (26%), Positives = 214/463 (46%), Gaps = 73/463 (15%)
Query: 225 NVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIA 284
N++++ +AK GLV AR++F+ + S+D VSW M+ GY Q EA +Y M +
Sbjct: 82 NLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQRGLGKEAFRLYSQMHWTAVI 141
Query: 285 PNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQ 344
P ++ ++SAC + F +G IH+ + K F F+ +I Y G LA
Sbjct: 142 PTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERV 201
Query: 345 F-ELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMA 403
F ++ D + ++N LI+G + G E A Q+F+ MQ
Sbjct: 202 FCDMLFCDRV-TFNTLISGHAQCGHGECALQIFDEMQL---------------------- 238
Query: 404 LELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDM 463
+G++P+ +T+ S+ A AS G L++G+ H Y+L ++ + +++D+
Sbjct: 239 ---------SGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDL 289
Query: 464 YAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSI 523
Y KCG I TA ++F ++ DR T+V WN ++ D + +I+ ++ I N
Sbjct: 290 YVKCGDIETAHDIF-NLGDR-TNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNKF 347
Query: 524 TFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRS 583
T+ +L TC G ++LGE+ S+ E D+ G ++D+ + L+ A +++
Sbjct: 348 TYPCILRTCTCTGQIELGEQ-IHSLSIKNGFESDMYVSGVLIDMYSKYRCLDKARKILE- 405
Query: 584 MPMKADVVIWGTLLAASRIHGNVEVG-------------------ERAAKSLAGL----Q 620
M K DVV W +++A H E AA + AG+ Q
Sbjct: 406 MLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQ 465
Query: 621 PSHGPSRVLLS-------------NIYADAGRWEDAFSIRKEM 650
+RV +S N+YA GR E+AFS+ +E+
Sbjct: 466 GLQIHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREI 508
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 138/634 (21%), Positives = 254/634 (40%), Gaps = 142/634 (22%)
Query: 44 QIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRND 103
+IH+ GL ++ I N LI+LYAK GL+ QA+ +F S+ D V
Sbjct: 64 EIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHV------------- 110
Query: 104 RLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVIS 163
S+ +M+ G+AQ +EA ++ M VIP L+SV+S
Sbjct: 111 ------------------SWVAMLSGYAQRGLGKEAFRLYSQMHWTAVIPTPYVLSSVLS 152
Query: 164 SSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVS 223
+ + RM+H V K + L+ +Y S A +F +M + V+
Sbjct: 153 ACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDMLFCDRVT 212
Query: 224 WNVMLNGFAKAGLVELARELFERIP----------------------------------- 248
+N +++G A+ G E A ++F+ +
Sbjct: 213 FNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLL 272
Query: 249 ----SKDVVSWGTMIDGYL-------------------------------QVERLSEALT 273
S D ++ G+++D Y+ Q+ L+++
Sbjct: 273 KAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFE 332
Query: 274 MYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYA 333
++ M GI PN ++ C G QIHS+ +K GF+ ++ +I Y+
Sbjct: 333 IFGQMQATGIHPNKFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYS 392
Query: 334 ACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISG 393
++ AR E+ K + SW ++IAG++++ E+A F MQ
Sbjct: 393 KYRCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQ------------- 439
Query: 394 YAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLN 453
D GV P+ I + S A A +++G H V + +
Sbjct: 440 ------------------DCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAAD 481
Query: 454 DNLSAAIIDMYAKCGSINTAFEVFYHI--RDRTTSVSPWNAIICGLAMHGDANLTLKIYS 511
++ ++++YA+CG AF +F I +D T WN +I G L ++
Sbjct: 482 ISIWNTLVNLYARCGRSEEAFSLFREIDHKDEIT----WNGLISGFGQSRLYEQALMVFM 537
Query: 512 DLEKRNIKLNSITFIGVLSTCCHAGLVDLGER-YFKSMKSVYNVEPDLKHYGCMVDLLGR 570
+ + K N TFI +S + + G++ + +++K+ + E ++ + ++ L G+
Sbjct: 538 KMSQAGAKYNVFTFISAISALANLADIKQGKQVHGRAVKTGHTSETEVAN--ALISLYGK 595
Query: 571 AGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHG 604
G +EDA+ + M ++ +V W T++ + HG
Sbjct: 596 CGSIEDAKMIFSEMSLRNEVS-WNTIITSCSQHG 628
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 133/310 (42%), Gaps = 42/310 (13%)
Query: 294 ISAC-GRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQF-ELGIKD 351
+ AC GR + L+IH+ V G I +I YA G + AR F EL +D
Sbjct: 49 LQACRGRGNRWPLVLEIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRD 108
Query: 352 HIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMV 411
H+ SW A+++G+ + G+ ++A +L++ M W+A+I
Sbjct: 109 HV-SWVAMLSGYAQRGLGKEAFRLYSQMH------WTAVI-------------------- 141
Query: 412 DAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSIN 471
P + SV A +GR H V + + A+I +Y GS
Sbjct: 142 -----PTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFK 196
Query: 472 TAFEVFYHIR--DRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVL 529
A VF + DR T +N +I G A G L+I+ +++ ++ + +T +L
Sbjct: 197 LAERVFCDMLFCDRVT----FNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLL 252
Query: 530 STCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKAD 589
+ C G + G++ + + D G ++DL + G +E A ++ ++ + +
Sbjct: 253 AACASVGDLQKGKQLHSYLLKA-GMSFDYITEGSLLDLYVKCGDIETAHDIF-NLGDRTN 310
Query: 590 VVIWGTLLAA 599
VV+W +L A
Sbjct: 311 VVLWNLMLVA 320
>gi|125571373|gb|EAZ12888.1| hypothetical protein OsJ_02809 [Oryza sativa Japonica Group]
Length = 669
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 196/626 (31%), Positives = 317/626 (50%), Gaps = 97/626 (15%)
Query: 40 SQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGY 99
S G IH+L+ + G S+ F+ + L+N Y G
Sbjct: 138 SNGDAIHALVRRIGFTSDVFVMSGLVNYY-----------------------------GA 168
Query: 100 IRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLA 159
R+ + +A +VF++ + VS+TSMI AQ W + L++ +M+ G+IPN+VT+
Sbjct: 169 FRS--VEEASKVFEEMYERDVVSWTSMISACAQCGHWDKVLKMLSEMQAEGIIPNKVTII 226
Query: 160 SVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKER 219
S++S+ + E R ++ V K I+ V I L++MY C L +A
Sbjct: 227 SLLSACGQTQAVDEGRWVYNQVGKFGIEADVDIRNALISMYTKCGCLSDAL--------- 277
Query: 220 NIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAML 279
E F+ +P++ SW T+IDG++Q EAL ++ ML
Sbjct: 278 ----------------------EAFQAMPARYTKSWNTLIDGFVQNHEHKEALRIFEEML 315
Query: 280 CDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRIN 339
G+ P+ + +V ++SAC + +G+ +HS I G C + + ++I+ YA CG +
Sbjct: 316 LHGVTPDGITLVSVLSACAQLGELRKGMHVHSYIKDNGICCDNILTNSLINMYAKCGDMA 375
Query: 340 LARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQ 399
A ++F M K+DV SW+ M+ GY + Q
Sbjct: 376 AAE-------------------------------RVFQTMTKKDVVSWTVMVCGYVKGHQ 404
Query: 400 PNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAA 459
MA LF M A V +E+ +VS+ A + G L +GR H Y+ ++ + L +A
Sbjct: 405 FTMAFNLFEEMKIAEVVAHEMALVSLLSACSQLGALDKGREIHSYIEEMNVAKDLCLESA 464
Query: 460 IIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSD-LEKRNI 518
++DMYAKCG I+TA E+F ++ + T WNA+I GLA +G ++++ LE ++
Sbjct: 465 LVDMYAKCGCIDTASEIFRKMQHKQTL--SWNAMIGGLASNGYGKEAVELFDQMLELQDP 522
Query: 519 KLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAE 578
K + IT VL C H G+VD G RYF M S+ V PD +HYGC+VDLLGRAG L++A
Sbjct: 523 KPDGITLKAVLGACAHVGMVDEGLRYFYLMSSL-GVVPDTEHYGCIVDLLGRAGMLDEAF 581
Query: 579 EVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAG 638
I+ MP++ + VIWG+LLAA R+H +++G+ + + + P+ VL+SN++A+
Sbjct: 582 HFIKKMPIEPNPVIWGSLLAACRVHHRMDLGKVIGQHIVNVAPNDVGVHVLVSNLHAEES 641
Query: 639 RWEDAFSIRKEMRDCGMKRLPGFSGV 664
+W+D +R M G+++ PG S V
Sbjct: 642 QWDDVEHVRGLMGSRGIEKTPGHSSV 667
Score = 198 bits (503), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 158/579 (27%), Positives = 257/579 (44%), Gaps = 104/579 (17%)
Query: 26 LVSALRYCS--AHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
L++ L C+ AH+A ++H + ++ L S++F+ LI L A
Sbjct: 20 LLAYLDACASRAHLA-----ELHGRLVRAHLTSDSFVAGRLIALLAS------------- 61
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
P A R+D + AR+VFD + MI G++ + R+AL VF
Sbjct: 62 -----PAA---------RHD-MRYARKVFDGMAQPNAFVWNCMIRGYSSCEAPRDALAVF 106
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGI-WECR--MLHGLVIKLMIDGFVIISTNLLNMY 200
R+MR GV P+ T+A+V+S+S G+ W +H LV ++ V + + L+N Y
Sbjct: 107 REMRRRGVSPDNYTMAAVVSASAAFAGLKWRSNGDAIHALVRRIGFTSDVFVMSGLVNYY 166
Query: 201 CVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMID 260
S+ EA +F+EM ER++VSW M++ A+ G W
Sbjct: 167 GAFRSVEEASKVFEEMYERDVVSWTSMISACAQCG------------------HW----- 203
Query: 261 GYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDC 320
+ L M M +GI PN V I+ L+SACG+ A EG +++ + K G +
Sbjct: 204 --------DKVLKMLSEMQAEGIIPNKVTIISLLSACGQTQAVDEGRWVYNQVGKFGIEA 255
Query: 321 YDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ 380
I+ +I Y CG ++ A F+ + SWN LI GF+
Sbjct: 256 DVDIRNALISMYTKCGCLSDALEAFQAMPARYTKSWNTLIDGFV---------------- 299
Query: 381 KRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRW 440
QN + AL +F M+ GV P+ IT+VSV A A G L++G
Sbjct: 300 ---------------QNHEHKEALRIFEEMLLHGVTPDGITLVSVLSACAQLGELRKGMH 344
Query: 441 AHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMH 500
H Y+ +N I ++ L+ ++I+MYAKCG + A VF + + V W ++CG
Sbjct: 345 VHSYIKDNGICCDNILTNSLINMYAKCGDMAAAERVFQTMTKK--DVVSWTVMVCGYVKG 402
Query: 501 GDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKH 560
+ ++ +++ + + + + +LS C G +D G R S NV DL
Sbjct: 403 HQFTMAFNLFEEMKIAEVVAHEMALVSLLSACSQLGALDKG-REIHSYIEEMNVAKDLCL 461
Query: 561 YGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAA 599
+VD+ + G ++ A E+ R M K + W ++
Sbjct: 462 ESALVDMYAKCGCIDTASEIFRKMQHK-QTLSWNAMIGG 499
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 117/485 (24%), Positives = 209/485 (43%), Gaps = 97/485 (20%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
++ ++S L C AV +G+ +++ + K G+E++ I+N+LI++Y KCG +S A F
Sbjct: 222 KVTIISLLSACGQTQAVDEGRWVYNQVGKFGIEADVDIRNALISMYTKCGCLSDALEAFQ 281
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+ + N +I G++ QN +EAL +
Sbjct: 282 AMPARYTKSWNTLIDGFV-------------------------------QNHEHKEALRI 310
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
F +M + GV P+ +TL SV+S+ LG + + +H + I I++ +L+NMY
Sbjct: 311 FEEMLLHGVTPDGITLVSVLSACAQLGELRKGMHVHSYIKDNGICCDNILTNSLINMYAK 370
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
C + A +F M ++++VSW VM+ G+ K +A LFE + +VV+
Sbjct: 371 CGDMAAAERVFQTMTKKDVVSWTVMVCGYVKGHQFTMAFNLFEEMKIAEVVA-------- 422
Query: 263 LQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD 322
+++ +V L+SAC + A +G +IHS I +
Sbjct: 423 -----------------------HEMALVSLLSACSQLGALDKGREIHSYIEEMNVAKDL 459
Query: 323 FIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKR 382
+++ ++ YA CG I+ A F SWNA+I G NG ++A +LF+ M
Sbjct: 460 CLESALVDMYAKCGCIDTASEIFRKMQHKQTLSWNAMIGGLASNGYGKEAVELFDQM--- 516
Query: 383 DVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAH 442
LEL KP+ IT+ +V A A G + EG
Sbjct: 517 ---------------------LEL------QDPKPDGITLKAVLGACAHVGMVDEGLRYF 549
Query: 443 EYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSP--WNAIICGLAMH 500
+ + + + I+D+ + G ++ E F+ I+ +P W +++ +H
Sbjct: 550 YLMSSLGVVPDTEHYGCIVDLLGRAGMLD---EAFHFIKKMPIEPNPVIWGSLLAACRVH 606
Query: 501 GDANL 505
+L
Sbjct: 607 HRMDL 611
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 137/287 (47%), Gaps = 20/287 (6%)
Query: 324 IQATIIHFYAACG-RINLARLQFELGIKDHIASWNALIAGFI---------RNGMIEDAR 373
I+ ++ + AC R +LA L L ++ H+ S ++ +AG + R+ M AR
Sbjct: 16 IRHHLLAYLDACASRAHLAELHGRL-VRAHLTS-DSFVAGRLIALLASPAARHDM-RYAR 72
Query: 374 QLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSG 433
++F+ M + + + W+ MI GY+ E P AL +F M GV P+ TM +V A A+
Sbjct: 73 KVFDGMAQPNAFVWNCMIRGYSSCEAPRDALAVFREMRRRGVSPDNYTMAAVVSASAAFA 132
Query: 434 TLK---EGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPW 490
LK G H V T + + + +++ Y S+ A +VF + +R V W
Sbjct: 133 GLKWRSNGDAIHALVRRIGFTSDVFVMSGLVNYYGAFRSVEEASKVFEEMYER--DVVSW 190
Query: 491 NAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKS 550
++I A G + LK+ S+++ I N +T I +LS C VD G R+ +
Sbjct: 191 TSMISACAQCGHWDKVLKMLSEMQAEGIIPNKVTIISLLSACGQTQAVDEG-RWVYNQVG 249
Query: 551 VYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLL 597
+ +E D+ ++ + + G L DA E ++MP + W TL+
Sbjct: 250 KFGIEADVDIRNALISMYTKCGCLSDALEAFQAMPARY-TKSWNTLI 295
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 71/138 (51%), Gaps = 5/138 (3%)
Query: 22 YELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMF 81
+E+ALVS L CS A+ +G++IHS I + + + ++++L+++YAKCG I A +F
Sbjct: 423 HEMALVSLLSACSQLGALDKGREIHSYIEEMNVAKDLCLESALVDMYAKCGCIDTASEIF 482
Query: 82 DSCSTLDPVACNIMISGYIRNDRLNDAREVFDKT-----PIKCCVSYTSMIMGFAQNDCW 136
++ N MI G N +A E+FD+ P ++ +++ A
Sbjct: 483 RKMQHKQTLSWNAMIGGLASNGYGKEAVELFDQMLELQDPKPDGITLKAVLGACAHVGMV 542
Query: 137 REALEVFRDMRILGVIPN 154
E L F M LGV+P+
Sbjct: 543 DEGLRYFYLMSSLGVVPD 560
>gi|78183583|dbj|BAD67156.2| PpPPR_77 [Physcomitrella patens]
Length = 1106
Score = 322 bits (826), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 200/639 (31%), Positives = 319/639 (49%), Gaps = 98/639 (15%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
L L+SA C+ A + G+ IH I +SG++SN + N+L+N+Y +CG
Sbjct: 435 LHLLSA---CANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCG----------- 480
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
L +A+ VF+ T + +S+ SMI G AQ+ + A ++F
Sbjct: 481 --------------------SLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLF 520
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
++M+ + P+ +T ASV+S + + + +HG + + + V + L+NMY C
Sbjct: 521 QEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGNALINMYIRC 580
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYL 263
SL +A R +F + +DV+SW MI G
Sbjct: 581 GSLQDA-------------------------------RNVFHSLQHRDVMSWTAMIGGCA 609
Query: 264 QVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDF 323
+A+ ++ M +G P ++ C + EG ++ + I+ +G+
Sbjct: 610 DQGEDMKAIELFWQMQNEGFRPVKSTFSSILKVCTSSACLDEGKKVIAYILNSGY----- 664
Query: 324 IQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRD 383
+ + G+ NALI+ + ++G + DAR++F+ M RD
Sbjct: 665 --------------------ELDTGVG------NALISAYSKSGSMTDAREVFDKMPSRD 698
Query: 384 VYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHE 443
+ SW+ +I+GYAQN A+E + M + V PN+ + VS+ A +S L+EG+ H
Sbjct: 699 IVSWNKIIAGYAQNGLGQTAVEFAYQMQEQDVVPNKFSFVSLLNACSSFSALEEGKRVHA 758
Query: 444 YVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDA 503
++ + + + AA+I MYAKCGS A EVF +I ++ +V WNA+I A HG A
Sbjct: 759 EIVKRKLQGDVRVGAALISMYAKCGSQGEAQEVFDNIIEK--NVVTWNAMINAYAQHGLA 816
Query: 504 NLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGC 563
+ L ++ +EK IK + TF +LS C HAGLV G + F SM+S Y V P ++HYGC
Sbjct: 817 SKALGFFNCMEKEGIKPDGSTFTSILSACNHAGLVLEGYQIFSSMESEYGVLPTIEHYGC 876
Query: 564 MVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSH 623
+V LLGRA + ++AE +I MP D +W TLL A RIHGN+ + E AA + L +
Sbjct: 877 LVGLLGRARRFQEAETLINQMPFPPDAAVWETLLGACRIHGNIALAEHAANNALKLNARN 936
Query: 624 GPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
+LLSN+YA AGRW+D IR+ M G+++ PG S
Sbjct: 937 PAVYILLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRS 975
Score = 198 bits (503), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 150/591 (25%), Positives = 260/591 (43%), Gaps = 100/591 (16%)
Query: 17 LQNSDY---ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGL 73
+QN+ + ++ +S L C + + G++IHS I K+G + + +QNSL+++Y KCG
Sbjct: 119 MQNAGFIPNKITYISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCG- 177
Query: 74 ISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQN 133
L AR+VF + VSY +M+ +AQ
Sbjct: 178 ------------------------------DLPRARQVFAGISPRDVVSYNTMLGLYAQK 207
Query: 134 DCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIIS 193
+E L +F M G+ P++VT +++ + + E + +H L ++ ++ + +
Sbjct: 208 AYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVG 267
Query: 194 TNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVV 253
T L+ M CV + G V+ A++ F+ +DVV
Sbjct: 268 TALVTM-CV------------------------------RCGDVDSAKQAFKGTADRDVV 296
Query: 254 SWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSII 313
+ +I Q EA Y M DG+A N + +++AC + A G IHS I
Sbjct: 297 VYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHI 356
Query: 314 VKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDAR 373
+ G I +I YA CG + AR F K + SWNA+IAG+
Sbjct: 357 SEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGY---------- 406
Query: 374 QLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSG 433
A+ E A+ L+ M GVKP +T + + A A+S
Sbjct: 407 ---------------------ARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSS 445
Query: 434 TLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAI 493
+G+ HE +L + I N +L+ A+++MY +CGS+ A VF + R V WN++
Sbjct: 446 AYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQAR--DVISWNSM 503
Query: 494 ICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYN 553
I G A HG K++ +++ ++ ++ITF VLS C + ++LG++ +
Sbjct: 504 IAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITES-G 562
Query: 554 VEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHG 604
++ D+ ++++ R G L+DA V S+ + DV+ W ++ G
Sbjct: 563 LQLDVNLGNALINMYIRCGSLQDARNVFHSLQHR-DVMSWTAMIGGCADQG 612
Score = 192 bits (489), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 140/586 (23%), Positives = 258/586 (44%), Gaps = 105/586 (17%)
Query: 27 VSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCST 86
V+ L+ C+ + + ++IH+ + ++ + + F+ N LIN+Y KC +S+ D
Sbjct: 31 VALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKC------RSVLD---- 80
Query: 87 LDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDM 146
A +VF + P + +S+ S+I +AQ ++A ++F +M
Sbjct: 81 ---------------------AHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEM 119
Query: 147 RILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSL 206
+ G IPN++T S++++ + + +H +IK + +LL+MY C L
Sbjct: 120 QNAGFIPNKITYISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDL 179
Query: 207 VEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVE 266
A R++F I +DVVS+ TM+ Y Q
Sbjct: 180 PRA-------------------------------RQVFAGISPRDVVSYNTMLGLYAQKA 208
Query: 267 RLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQA 326
+ E L ++ M +GI+P+ V ++L+ A EG +IH + V
Sbjct: 209 YVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTV------------ 256
Query: 327 TIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYS 386
E G+ I AL+ +R G ++ A+Q F RDV
Sbjct: 257 -------------------EEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGTADRDVVV 297
Query: 387 WSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVL 446
++A+I+ AQ+ A E ++ M GV N T +S+ A ++S L+ G+ H ++
Sbjct: 298 YNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHIS 357
Query: 447 NNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLT 506
+ + + + A+I MYA+CG + A E+FY + R + WNAII G A D
Sbjct: 358 EDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKR--DLISWNAIIAGYARREDRGEA 415
Query: 507 LKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYG---- 562
+++Y ++ +K +TF+ +LS C ++ G+ + + + +K G
Sbjct: 416 MRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDI-----LRSGIKSNGHLAN 470
Query: 563 CMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEV 608
++++ R G L +A+ V + DV+ W +++A HG+ E
Sbjct: 471 ALMNMYRRCGSLMEAQNVFEGTQAR-DVISWNSMIAGHAQHGSYET 515
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 105/425 (24%), Positives = 178/425 (41%), Gaps = 96/425 (22%)
Query: 17 LQNSDYE---LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGL 73
+QN + E + S L C A+ G+QIH I +SGL+ + + N+LIN+Y +CG
Sbjct: 523 MQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGNALINMYIRCGS 582
Query: 74 ISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQN 133
+ A+++F S D +S+T+MI G A
Sbjct: 583 LQDARNVFHSLQHRD-------------------------------VMSWTAMIGGCADQ 611
Query: 134 DCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIIS 193
+A+E+F M+ G P + T +S++ + E + + ++ + +
Sbjct: 612 GEDMKAIELFWQMQNEGFRPVKSTFSSILKVCTSSACLDEGKKVIAYILNSGYELDTGVG 671
Query: 194 TNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVV 253
L++ Y S+ +AR +FD+M R+IVSWN ++ G+A+ GL + A E ++ +DVV
Sbjct: 672 NALISAYSKSGSMTDAREVFDKMPSRDIVSWNKIIAGYAQNGLGQTAVEFAYQMQEQDVV 731
Query: 254 SWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSII 313
PN V L++AC A EG ++H+ I
Sbjct: 732 -------------------------------PNKFSFVSLLNACSSFSALEEGKRVHAEI 760
Query: 314 VKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDAR 373
VK + A +I YA CG A+ F+ I+ ++ +WNA+I + ++G+ A
Sbjct: 761 VKRKLQGDVRVGAALISMYAKCGSQGEAQEVFDNIIEKNVVTWNAMINAYAQHGLASKAL 820
Query: 374 QLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSG 433
FN M+K G+KP+ T S+ A +G
Sbjct: 821 GFFNCMEKE-------------------------------GIKPDGSTFTSILSACNHAG 849
Query: 434 TLKEG 438
+ EG
Sbjct: 850 LVLEG 854
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 127/256 (49%), Gaps = 5/256 (1%)
Query: 357 NALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVK 416
N LI +++ + DA Q+F M +RDV SW+++IS YAQ A +LF M +AG
Sbjct: 66 NLLINMYVKCRSVLDAHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFI 125
Query: 417 PNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEV 476
PN+IT +S+ A S L+ G+ H ++ + + +++ MY KCG + A +V
Sbjct: 126 PNKITYISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQV 185
Query: 477 FYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAG 536
F I R V +N ++ A L ++ + I + +T+I +L
Sbjct: 186 FAGISPR--DVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPS 243
Query: 537 LVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTL 596
++D G+R K + + D++ +V + R G ++ A++ + + DVV++ L
Sbjct: 244 MLDEGKRIHK-LTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGTADR-DVVVYNAL 301
Query: 597 LAASRIHG-NVEVGER 611
+AA HG NVE E+
Sbjct: 302 IAALAQHGHNVEAFEQ 317
>gi|224119336|ref|XP_002331286.1| predicted protein [Populus trichocarpa]
gi|222873711|gb|EEF10842.1| predicted protein [Populus trichocarpa]
Length = 897
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 190/636 (29%), Positives = 317/636 (49%), Gaps = 97/636 (15%)
Query: 28 SALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTL 87
S R C+A A+ G+++HS KS S+ + + +++YAKCG
Sbjct: 287 SLFRSCAALSALRLGKELHSHALKSAFGSDIIVGTATLDMYAKCG--------------- 331
Query: 88 DPVACNIMISGYIRNDRLNDAREVFDKTPIKCCV-SYTSMIMGFAQNDCWREALEVFRDM 146
R+ DA++V P KC + SY ++I+G+A++D +AL+ F+ +
Sbjct: 332 ----------------RMADAQKVLSSMP-KCSLQSYNAIIVGYARSDRGFQALKSFQLL 374
Query: 147 RILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSL 206
G+ +E+TL+ +++ + G E R +HGL +K + + ++ +L+MY C +L
Sbjct: 375 LKTGLGFDEITLSGALNACASIRGDLEGRQVHGLAVKSISMSNICVANAILDMYGKCKAL 434
Query: 207 VEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVE 266
EA +LF+ + +D VSW +I Q
Sbjct: 435 AEAS-------------------------------DLFDMMERRDAVSWNAIIAACEQNG 463
Query: 267 RLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQA 326
E L + +M+ + P+D ++ AC A G++IH+ I+K+G F+ A
Sbjct: 464 NEEETLAHFASMIHSRMEPDDFTYGSVLKACAGRQALNTGMEIHTRIIKSGMGFDSFVGA 523
Query: 327 TIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYS 386
++ Y CG MIE A ++ + +++ + S
Sbjct: 524 ALVDMYCKCG-------------------------------MIEKADKIHDRTEQKTMVS 552
Query: 387 WSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVL 446
W+A+ISG++ +Q A + F M++ GV P+ T +V A+ T+ G+ H ++
Sbjct: 553 WNAIISGFSLLQQSEDAHKFFSRMLEMGVNPDNFTYAAVLDTCANLATVGLGKQIHAQII 612
Query: 447 NNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLT 506
+ + + + ++DMY+KCG++ + +F +R WNA++CG A HG
Sbjct: 613 KQELQSDVYICSTLVDMYSKCGNMQDSQLMFEKAPNR--DFVTWNAMLCGYAHHGLGEEA 670
Query: 507 LKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVD 566
LK++ ++ N+K N TF+ VL C H GLVD G YF M S Y ++P +HY CMVD
Sbjct: 671 LKLFESMQLVNVKPNHATFVSVLRACAHMGLVDKGLHYFDVMLSEYGLDPQSEHYSCMVD 730
Query: 567 LLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPS 626
+LGR+G++++A +++ MP +AD VIW LL+ +IHGNVEV E+A ++L L P +
Sbjct: 731 ILGRSGRIDEALNLVQKMPFEADAVIWRNLLSVCKIHGNVEVAEKATRALLQLDPQDSSA 790
Query: 627 RVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
VLLSNIYADAG W + +RK MR +K+ PG S
Sbjct: 791 CVLLSNIYADAGMWGNVSEMRKMMRHNKLKKEPGCS 826
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 152/571 (26%), Positives = 261/571 (45%), Gaps = 74/571 (12%)
Query: 33 CSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVAC 92
CS +++ G+Q H+ + G E TF+ N L+ +Y KC + A +FD D V+
Sbjct: 59 CSKQNSLNPGKQAHARMIFCGFEPTTFVSNCLMQMYIKCLYLDYACKVFDKMYLRDVVSY 118
Query: 93 NIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVI 152
N +ISGY ++ AR+ F + P + VS+ S+I GF QN R++++VF +M GV
Sbjct: 119 NSIISGYASCGEMDIARKFFYEMPERDVVSWNSVISGFLQNGECRKSIDVFLEMGRCGVG 178
Query: 153 PNEVTLASVISSSVHLGGIWECRM---LHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
+ +LA V+ + G + EC M +HGLV+K D V+ + LL MY C L ++
Sbjct: 179 FDRASLAVVLKAC---GALEECDMGVQVHGLVVKFGFDCDVVTGSALLGMYAKCKRLDDS 235
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLS 269
S+F E+ E+N VSW+ MI G +Q +R
Sbjct: 236 LSVFSELPEKNWVSWS-------------------------------AMIAGCVQNDRNV 264
Query: 270 EALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATII 329
E L +++ M G+ + + L +C A G ++HS +K+ F + +
Sbjct: 265 EGLELFKEMQGVGVGVSQSIYASLFRSCAALSALRLGKELHSHALKSAFGSDIIVGTATL 324
Query: 330 HFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSA 389
YA CGR+ A+ K + S+NA+I
Sbjct: 325 DMYAKCGRMADAQKVLSSMPKCSLQSYNAIIV---------------------------- 356
Query: 390 MISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNS 449
GYA++++ AL+ F ++ G+ +EIT+ A AS EGR H + +
Sbjct: 357 ---GYARSDRGFQALKSFQLLLKTGLGFDEITLSGALNACASIRGDLEGRQVHGLAVKSI 413
Query: 450 ITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKI 509
N ++ AI+DMY KC ++ A ++F + +R +VS WNAII +G+ TL
Sbjct: 414 SMSNICVANAILDMYGKCKALAEASDLF-DMMERRDAVS-WNAIIAACEQNGNEEETLAH 471
Query: 510 YSDLEKRNIKLNSITFIGVLSTCCHAGLVDLG-ERYFKSMKSVYNVEPDLKHYGCMVDLL 568
++ + ++ + T+ VL C ++ G E + + +KS + + +VD+
Sbjct: 472 FASMIHSRMEPDDFTYGSVLKACAGRQALNTGMEIHTRIIKSGMGFDSFVG--AALVDMY 529
Query: 569 GRAGQLEDAEEVIRSMPMKADVVIWGTLLAA 599
+ G +E A+++ K +V W +++
Sbjct: 530 CKCGMIEKADKIHDRTEQKT-MVSWNAIISG 559
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 146/605 (24%), Positives = 265/605 (43%), Gaps = 105/605 (17%)
Query: 25 ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSC 84
+L L+ C A G Q+H L+ K G + + ++L+ +YAKC
Sbjct: 183 SLAVVLKACGALEECDMGVQVHGLVVKFGFDCDVVTGSALLGMYAKC------------- 229
Query: 85 STLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFR 144
RL+D+ VF + P K VS+++MI G QND E LE+F+
Sbjct: 230 ------------------KRLDDSLSVFSELPEKNWVSWSAMIAGCVQNDRNVEGLELFK 271
Query: 145 DMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCS 204
+M+ +GV ++ AS+ S L + + LH +K +I+ T L+MY
Sbjct: 272 EMQGVGVGVSQSIYASLFRSCAALSALRLGKELHSHALKSAFGSDIIVGTATLDMY---- 327
Query: 205 SLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQ 264
AK G + A+++ +P + S+ +I GY +
Sbjct: 328 ---------------------------AKCGRMADAQKVLSSMPKCSLQSYNAIIVGYAR 360
Query: 265 VERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFI 324
+R +AL ++ +L G+ +++ + ++AC EG Q+H + VK+
Sbjct: 361 SDRGFQALKSFQLLLKTGLGFDEITLSGALNACASIRGDLEGRQVHGLAVKS-------- 412
Query: 325 QATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDV 384
I+++ +I NA++ + + + +A LF+ M++RD
Sbjct: 413 -------------ISMS----------NICVANAILDMYGKCKALAEASDLFDMMERRDA 449
Query: 385 YSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEY 444
SW+A+I+ QN L F M+ + ++P++ T SV A A L G H
Sbjct: 450 VSWNAIIAACEQNGNEEETLAHFASMIHSRMEPDDFTYGSVLKACAGRQALNTGMEIHTR 509
Query: 445 VLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDAN 504
++ + + + + AA++DMY KCG I A ++ H R ++ WNAII G ++ +
Sbjct: 510 IIKSGMGFDSFVGAALVDMYCKCGMIEKADKI--HDRTEQKTMVSWNAIISGFSLLQQSE 567
Query: 505 LTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCM 564
K +S + + + ++ T+ VL TC + V LG++ + ++ D+ +
Sbjct: 568 DAHKFFSRMLEMGVNPDNFTYAAVLDTCANLATVGLGKQIHAQIIK-QELQSDVYICSTL 626
Query: 565 VDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAK-----SLAGL 619
VD+ + G ++D++ + P + D V W +L HG +GE A K L +
Sbjct: 627 VDMYSKCGNMQDSQLMFEKAPNR-DFVTWNAMLCGYAHHG---LGEEALKLFESMQLVNV 682
Query: 620 QPSHG 624
+P+H
Sbjct: 683 KPNHA 687
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 110/489 (22%), Positives = 196/489 (40%), Gaps = 99/489 (20%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E+ L AL C++ +G+Q+H L KS SN + N+++++Y KC +++A +FD
Sbjct: 383 EITLSGALNACASIRGDLEGRQVHGLAVKSISMSNICVANAILDMYGKCKALAEASDLFD 442
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
D VS+ ++I QN E L
Sbjct: 443 MMERRDA-------------------------------VSWNAIIAACEQNGNEEETLAH 471
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIK--LMIDGFVIISTNLLNMY 200
F M + P++ T SV+ + + +H +IK + D FV L++MY
Sbjct: 472 FASMIHSRMEPDDFTYGSVLKACAGRQALNTGMEIHTRIIKSGMGFDSFV--GAALVDMY 529
Query: 201 CVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMID 260
C C + +A + D +++ +VSWN +++GF+ E A + F R
Sbjct: 530 CKCGMIEKADKIHDRTEQKTMVSWNAIISGFSLLQQSEDAHKFFSR-------------- 575
Query: 261 GYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDC 320
ML G+ P++ ++ C G G QIH+ I+K
Sbjct: 576 -----------------MLEMGVNPDNFTYAAVLDTCANLATVGLGKQIHAQIIKQELQS 618
Query: 321 YDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ 380
+I +T++ Y+ CG + ++L FE +WNA++ G+ +G+ E+A +LF +MQ
Sbjct: 619 DVYICSTLVDMYSKCGNMQDSQLMFEKAPNRDFVTWNAMLCGYAHHGLGEEALKLFESMQ 678
Query: 381 KRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRW 440
VKPN T VSV A A G + +G
Sbjct: 679 L-------------------------------VNVKPNHATFVSVLRACAHMGLVDKGLH 707
Query: 441 AHEYVLNN-SITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAM 499
+ +L+ + + ++D+ + G I+ A + + +V W ++ +
Sbjct: 708 YFDVMLSEYGLDPQSEHYSCMVDILGRSGRIDEALNLVQKMPFEADAV-IWRNLLSVCKI 766
Query: 500 HGDANLTLK 508
HG+ + K
Sbjct: 767 HGNVEVAEK 775
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 90/391 (23%), Positives = 172/391 (43%), Gaps = 69/391 (17%)
Query: 3 LDHFHSVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQN 62
L HF S+ +S+ ++ D+ S L+ C+ A++ G +IH+ I KSG+ ++F+
Sbjct: 469 LAHFASMIHSR---MEPDDFTYG--SVLKACAGRQALNTGMEIHTRIIKSGMGFDSFVGA 523
Query: 63 SLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVS 122
+L+++Y KCG+I +A ++ D+T K VS
Sbjct: 524 ALVDMYCKCGMIEKAD-------------------------------KIHDRTEQKTMVS 552
Query: 123 YTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVI 182
+ ++I GF+ +A + F M +GV P+ T A+V+ + +L + + +H +I
Sbjct: 553 WNAIISGFSLLQQSEDAHKFFSRMLEMGVNPDNFTYAAVLDTCANLATVGLGKQIHAQII 612
Query: 183 KLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARE 242
K + V I + L++MY C ++ +++ +F++ R+ V+WN ML G+A GL E
Sbjct: 613 KQELQSDVYICSTLVDMYSKCGNMQDSQLMFEKAPNRDFVTWNAMLCGYAHHGLGE---- 668
Query: 243 LFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMA 302
EAL ++ +M + PN V ++ AC
Sbjct: 669 ---------------------------EALKLFESMQLVNVKPNHATFVSVLRACAHMGL 701
Query: 303 FGEGLQIHSIIV-KAGFDCYDFIQATIIHFYAACGRINLA-RLQFELGIKDHIASWNALI 360
+GL +++ + G D + ++ GRI+ A L ++ + W L+
Sbjct: 702 VDKGLHYFDVMLSEYGLDPQSEHYSCMVDILGRSGRIDEALNLVQKMPFEADAVIWRNLL 761
Query: 361 AGFIRNGMIEDARQLFNNMQKRDVYSWSAMI 391
+ +G +E A + + + D SA +
Sbjct: 762 SVCKIHGNVEVAEKATRALLQLDPQDSSACV 792
>gi|357478647|ref|XP_003609609.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510664|gb|AES91806.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 576
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 195/616 (31%), Positives = 324/616 (52%), Gaps = 59/616 (9%)
Query: 60 IQNSLINLYAKCGLISQAKSMF-----DSCSTLDPV------ACNIMISGYIRNDRLNDA 108
+ L L KC + AK + ++ + L+P+ C+I I N L+
Sbjct: 2 VATKLTTLMKKCSTVKHAKQIHAQIITNNLTHLEPIFIHRILLCDITNYKTISNYILSIL 61
Query: 109 REVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHL 168
+ + S+ +I F+Q + EA+ ++ MR +G+ P+ ++S++ S +
Sbjct: 62 HHLRNPDSF----SWGCVIRFFSQKGQFVEAVSLYVQMRRIGLCPSSHAVSSILKSCARV 117
Query: 169 GGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVML 228
++HG V K D V + T LL++YC +V AR +FDEM ++N+VSWN +L
Sbjct: 118 EDDLCGLLIHGHVHKFGFDACVYVQTALLDLYCKIGDVVTARKVFDEMPDKNVVSWNSLL 177
Query: 229 NGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDV 288
+G+ K G ++ + F+ IP KDV+SW M+ GY + ++ A +++ M A +
Sbjct: 178 SGYIKGGNLDEGQRFFDEIPLKDVISWNCMVSGYAKAGKMDRACYLFQQMPERNFASWNT 237
Query: 289 MIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELG 348
MI Y CG I AR F+
Sbjct: 238 MITG---------------------------------------YVDCGSIVEARELFDAM 258
Query: 349 IKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFH 408
+ + S +IAG+ ++G + AR+LF+ M +D+ S++AMI+ YAQ+ +P AL+LF+
Sbjct: 259 PRRNSVSLITMIAGYSKSGDVHSARELFDQMDDKDLLSYNAMIACYAQSSKPKEALDLFN 318
Query: 409 GMV--DAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAK 466
M+ D+ + P+++T+ SV A + G L+ RW + N I L+D+L+ A+ID+YAK
Sbjct: 319 VMLKPDSSLHPDKMTLASVISACSQLGNLEHWRWIESQINNFGIVLDDHLATALIDLYAK 378
Query: 467 CGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFI 526
CGSI+ A+E+F+ +R R V ++A+I G ++G A+ ++++ + I N +T+
Sbjct: 379 CGSIDKAYELFHGLRKR--DVVAYSAMIYGCGINGRASDAVELFERMAGECIIPNLVTYT 436
Query: 527 GVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPM 586
G+L+ HAGL + G R F SMK + P + HYG MVDLLGRAG L++A ++I MPM
Sbjct: 437 GILTAYNHAGLAEEGYRCFISMKD-NGIVPSVDHYGIMVDLLGRAGWLDEAYKLIMKMPM 495
Query: 587 KADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSI 646
+ +V +WG LL A R+H N+++GE A + L+ LLS IYA G+W DA +
Sbjct: 496 QPNVGVWGALLLACRLHDNLKLGEIAVQHCIKLESETAGYYSLLSGIYATVGKWNDAKKL 555
Query: 647 RKEMRDCGMKRLPGFS 662
+ + ++PG S
Sbjct: 556 TTGVEGKKIIKIPGCS 571
Score = 175 bits (443), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 131/483 (27%), Positives = 219/483 (45%), Gaps = 73/483 (15%)
Query: 25 ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSC 84
A+ S L+ C+ G IH + K G ++ ++Q +L++LY K G + A+ +FD
Sbjct: 106 AVSSILKSCARVEDDLCGLLIHGHVHKFGFDACVYVQTALLDLYCKIGDVVTARKVFDEM 165
Query: 85 STLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFR 144
+ V+ N ++SGYI+ L++ + FD+ P+K +S+ M+ G+A+ A +F+
Sbjct: 166 PDKNVVSWNSLLSGYIKGGNLDEGQRFFDEIPLKDVISWNCMVSGYAKAGKMDRACYLFQ 225
Query: 145 DMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCS 204
M E AS W MI G+V C
Sbjct: 226 QM-------PERNFAS-----------WNT----------MITGYV-----------DCG 246
Query: 205 SLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQ 264
S+VEAR LFD M RN VS M+ G++K+G V ARELF+++ KD++S+ MI Y Q
Sbjct: 247 SIVEARELFDAMPRRNSVSLITMIAGYSKSGDVHSARELFDQMDDKDLLSYNAMIACYAQ 306
Query: 265 VERLSEALTMYRAMLC--DGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD 322
+ EAL ++ ML + P+ + + +ISAC + I S I G D
Sbjct: 307 SSKPKEALDLFNVMLKPDSSLHPDKMTLASVISACSQLGNLEHWRWIESQINNFGIVLDD 366
Query: 323 FIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKR 382
+ +I YA CG I+ A +LF+ ++KR
Sbjct: 367 HLATALIDLYAKCGS-------------------------------IDKAYELFHGLRKR 395
Query: 383 DVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAH 442
DV ++SAMI G N + + A+ELF M + PN +T + A +G +EG
Sbjct: 396 DVVAYSAMIYGCGINGRASDAVELFERMAGECIIPNLVTYTGILTAYNHAGLAEEGYRCF 455
Query: 443 EYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGD 502
+ +N I + + ++D+ + G ++ A+++ + +V W A++ +H +
Sbjct: 456 ISMKDNGIVPSVDHYGIMVDLLGRAGWLDEAYKLIMKM-PMQPNVGVWGALLLACRLHDN 514
Query: 503 ANL 505
L
Sbjct: 515 LKL 517
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 66/136 (48%), Gaps = 4/136 (2%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
++ L S + CS + + I S I G+ + + +LI+LYAKCG I +A +F
Sbjct: 331 KMTLASVISACSQLGNLEHWRWIESQINNFGIVLDDHLATALIDLYAKCGSIDKAYELFH 390
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKC----CVSYTSMIMGFAQNDCWRE 138
D VA + MI G N R +DA E+F++ +C V+YT ++ + E
Sbjct: 391 GLRKRDVVAYSAMIYGCGINGRASDAVELFERMAGECIIPNLVTYTGILTAYNHAGLAEE 450
Query: 139 ALEVFRDMRILGVIPN 154
F M+ G++P+
Sbjct: 451 GYRCFISMKDNGIVPS 466
>gi|449455978|ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212001 [Cucumis sativus]
Length = 2598
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 192/552 (34%), Positives = 289/552 (52%), Gaps = 73/552 (13%)
Query: 122 SYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLV 181
S+ S+I A+ EAL F +R LG+IP + I S L + RM H
Sbjct: 1982 SWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRMSHQQA 2041
Query: 182 IKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELAR 241
+ + +S+ L++MY C L +A R
Sbjct: 2042 FVFGFETDLFVSSALIDMYSKCGQLKDA-------------------------------R 2070
Query: 242 ELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPND--------VMIVDL 293
LF+ IP ++VVSW +MI GY+Q E+ AL +++ L + D V++V +
Sbjct: 2071 ALFDEIPLRNVVSWTSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSV 2130
Query: 294 ISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHI 353
+SAC R G +H +VK GFD + T++ YA CG+
Sbjct: 2131 LSACSRVSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQ---------------- 2174
Query: 354 ASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMV-D 412
L++ +++F+ M+++D SW++MI+ YAQ+ ALE+FHGMV
Sbjct: 2175 ----PLVS-----------KKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRH 2219
Query: 413 AGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINT 472
GV+ N +T+ +V A A +G L+ G+ H+ V+ + N + +IIDMY KCG +
Sbjct: 2220 VGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEM 2279
Query: 473 AFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTC 532
A + F ++++ +V W A++ G MHG A L I+ + + +K N ITF+ VL+ C
Sbjct: 2280 AKKTFDRMKEK--NVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAAC 2337
Query: 533 CHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVI 592
HAGLV+ G +F +MK Y++EP ++HYGCMVDL GRAG L +A +I+ M MK D V+
Sbjct: 2338 SHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFVV 2397
Query: 593 WGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRD 652
WG+LL A RIH NV++GE AA+ L L P + VLLSN+YADAGRW D +R M++
Sbjct: 2398 WGSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLYADAGRWADVERMRMLMKN 2457
Query: 653 CGMKRLPGFSGV 664
+ + PGFS V
Sbjct: 2458 RQLVKPPGFSLV 2469
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 132/403 (32%), Positives = 207/403 (51%), Gaps = 33/403 (8%)
Query: 175 RMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKA 234
R +H +I+ + +++ L+++Y + A LF +++ +WN+++
Sbjct: 44 RQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTIN 103
Query: 235 GLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLI 294
GL E +AL +Y+ M+C GIA + +I
Sbjct: 104 GLSE-------------------------------QALMLYKNMVCQGIAADKFTFPFVI 132
Query: 295 SACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIA 354
AC ++ G +H ++K GF F+Q +I FY CG A FE ++
Sbjct: 133 KACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVV 192
Query: 355 SWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAG 414
SW +I+G I G +++AR++F+ + ++V SW+AMI+GY +N+QP ALELF M
Sbjct: 193 SWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAEN 252
Query: 415 VKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAF 474
+ PNE TMVS+ A G L GR H+Y + N I + L A+IDMY+KCGSI A
Sbjct: 253 IFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAI 312
Query: 475 EVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCH 534
EVF + + S+ WN++I L +HG L ++S++E+ N+K ++ITFIGVL C H
Sbjct: 313 EVFETMPRK--SLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVH 370
Query: 535 AGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDA 577
V G YF M Y + P +HY CM +L R+ L++A
Sbjct: 371 IKNVKEGCAYFTRMTQHYGIAPIPEHYECMTELYARSNNLDEA 413
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 124/491 (25%), Positives = 221/491 (45%), Gaps = 112/491 (22%)
Query: 29 ALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLD 88
++ CSA + G+ H F G E++ F+ ++LI++Y+KCG
Sbjct: 2021 TIKSCSALCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCG---------------- 2064
Query: 89 PVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRD--- 145
+L DAR +FD+ P++ VS+TSMI G+ QN+ AL +F+D
Sbjct: 2065 ---------------QLKDARALFDEIPLRNVVSWTSMITGYVQNEQADNALLLFKDFLE 2109
Query: 146 ----MRILGVIP-NEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMY 200
+ +P + V + SV+S+ + G +HG V+K DG + + L++ Y
Sbjct: 2110 EETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAY 2169
Query: 201 CVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMID 260
C + ++ +FD M+E++ +SWN M+ +A++GL
Sbjct: 2170 AKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLS----------------------- 2206
Query: 261 GYLQVERLSEALTMYRAMLCD-GIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFD 319
EAL ++ M+ G+ N V + ++ AC A A G IH ++K +
Sbjct: 2207 --------GEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLE 2258
Query: 320 CYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNM 379
+ +II Y CGR+ +A+ F+ + ++ SW A++AG+ GM A++
Sbjct: 2259 YNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGY---GMHGRAKE----- 2310
Query: 380 QKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG- 438
AL++F+ MV AGVKPN IT VSV A + +G ++EG
Sbjct: 2311 -----------------------ALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVEEGW 2347
Query: 439 RW----AHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAII 494
W H+Y + I ++D++ + G +N A+ + ++ + V W +++
Sbjct: 2348 HWFNAMKHKYDIEPGI----EHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFVV-WGSLL 2402
Query: 495 CGLAMHGDANL 505
+H + +L
Sbjct: 2403 GACRIHKNVDL 2413
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 113/438 (25%), Positives = 198/438 (45%), Gaps = 71/438 (16%)
Query: 43 QQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRN 102
+QIH+ I +SGL ++ + LI+LY+ G I+ A I++ I+N
Sbjct: 44 RQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYA----------------ILLFYQIQN 87
Query: 103 DRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVI 162
C ++ +I N +AL ++++M G+ ++ T VI
Sbjct: 88 ---------------PCTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVI 132
Query: 163 SSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIV 222
+ + I +++HG +IK G V + NL++ Y C A +F++M+ RN+V
Sbjct: 133 KACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVV 192
Query: 223 SWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDG 282
SW +++G G ++ AR +F+ IPSK+VVSW MI+GY++ ++ EAL +++ M +
Sbjct: 193 SWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAEN 252
Query: 283 IAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLAR 342
I PN+ +V LI AC G IH +K + ++ +I Y+ CG I A
Sbjct: 253 IFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAI 312
Query: 343 LQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNM 402
FE + + +WN++I +G+ ++A LF+ M++
Sbjct: 313 EVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMER--------------------- 351
Query: 403 ALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG-----RWAHEYVLNNSITLNDNLS 457
VKP+ IT + V CA +KEG R Y I
Sbjct: 352 ----------VNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHY----GIAPIPEHY 397
Query: 458 AAIIDMYAKCGSINTAFE 475
+ ++YA+ +++ AF+
Sbjct: 398 ECMTELYARSNNLDEAFK 415
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 141/261 (54%), Gaps = 5/261 (1%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
++ C+ +++ G+ +H + K G + F+QN+LI+ Y KCG A +F+ +
Sbjct: 132 IKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNV 191
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
V+ +ISG I L +AR +FD+ P K VS+T+MI G+ +N EALE+F+ M+
Sbjct: 192 VSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAE 251
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
+ PNE T+ S+I + +G + R +H IK I+ V + T L++MY C S+ +A
Sbjct: 252 NIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDA 311
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELF---ERIPSK-DVVSWGTMIDGYLQV 265
+F+ M +++ +WN M+ GL + A LF ER+ K D +++ ++ + +
Sbjct: 312 IEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHI 371
Query: 266 ERLSEALTMYRAMLCD-GIAP 285
+ + E + M GIAP
Sbjct: 372 KNVKEGCAYFTRMTQHYGIAP 392
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/346 (25%), Positives = 149/346 (43%), Gaps = 73/346 (21%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+ +VS L CS + +H + K G + + + N+L++ YAKCG
Sbjct: 2125 VVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCG----------- 2173
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
P+ +++VFD K +S+ SMI +AQ+ EALEVF
Sbjct: 2174 ----QPLV----------------SKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVF 2213
Query: 144 RDM-RILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
M R +GV N VTL++V+ + H G + + +H VIK+ ++ V + T++++MYC
Sbjct: 2214 HGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCK 2273
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
C + A+ FD MKE+N+ SW M+ G+ G
Sbjct: 2274 CGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHG--------------------------- 2306
Query: 263 LQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQ-----IHSIIVKAG 317
R EAL ++ M+ G+ PN + V +++AC A EG H ++ G
Sbjct: 2307 ----RAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPG 2362
Query: 318 FDCYDFIQATIIHFYAACGRINLA-RLQFELGIKDHIASWNALIAG 362
+ Y ++ + G +N A L + +K W +L+
Sbjct: 2363 IEHY----GCMVDLFGRAGCLNEAYNLIKRMKMKPDFVVWGSLLGA 2404
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 130/330 (39%), Gaps = 70/330 (21%)
Query: 308 QIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNG 367
QIH+ I+++G + +IH Y+ GRI A L
Sbjct: 45 QIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAIL------------------------ 80
Query: 368 MIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFC 427
LF +Q ++W+ +I N AL L+ MV G+ ++ T V
Sbjct: 81 -------LFYQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIK 133
Query: 428 AIASSGTLKEGRWAH----EYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDR 483
A + ++ G+ H +Y + + + +NL ID Y KCG A +VF +R R
Sbjct: 134 ACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNL----IDFYFKCGHTRFALKVFEKMRVR 189
Query: 484 -----TTSVS------------------------PWNAIICGLAMHGDANLTLKIYSDLE 514
TT +S W A+I G + L+++ ++
Sbjct: 190 NVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQ 249
Query: 515 KRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQL 574
NI N T + ++ C G++ LG R +E + ++D+ + G +
Sbjct: 250 AENIFPNEYTMVSLIKACTEMGILTLG-RGIHDYAIKNCIEIGVYLGTALIDMYSKCGSI 308
Query: 575 EDAEEVIRSMPMKADVVIWGTLLAASRIHG 604
+DA EV +MP K+ + W +++ + +HG
Sbjct: 309 KDAIEVFETMPRKS-LPTWNSMITSLGVHG 337
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 104/238 (43%), Gaps = 46/238 (19%)
Query: 22 YELALVSALRYCSAHI-AVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSM 80
Y +SA+ AH A+ G+ IH + K LE N + S+I++Y KCG
Sbjct: 2224 YNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCG-------- 2275
Query: 81 FDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREAL 140
R+ A++ FD+ K S+T+M+ G+ + +EAL
Sbjct: 2276 -----------------------RVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEAL 2312
Query: 141 EVFRDMRILGVIPNEVTLASVISSSVHLGGI-----WECRMLHGLVIKLMIDGFVIISTN 195
++F M GV PN +T SV+++ H G + W M H I+ I+ +
Sbjct: 2313 DIFYKMVRAGVKPNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGC---- 2368
Query: 196 LLNMYCVCSSLVEARSLFDEMKER-NIVSWNVMLNGFAKAGLVEL----ARELFERIP 248
+++++ L EA +L MK + + V W +L V+L A++LFE P
Sbjct: 2369 MVDLFGRAGCLNEAYNLIKRMKMKPDFVVWGSLLGACRIHKNVDLGEIAAQKLFELDP 2426
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 67/151 (44%), Gaps = 31/151 (20%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E +VS ++ C+ ++ G+ IH K+ +E ++ +LI++Y+KCG I
Sbjct: 257 EYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIK------- 309
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
DA EVF+ P K ++ SMI + +EAL +
Sbjct: 310 ------------------------DAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNL 345
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWE 173
F +M + V P+ +T V+ + VH+ + E
Sbjct: 346 FSEMERVNVKPDAITFIGVLCACVHIKNVKE 376
>gi|297846216|ref|XP_002890989.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297336831|gb|EFH67248.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 792
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 211/678 (31%), Positives = 345/678 (50%), Gaps = 65/678 (9%)
Query: 39 VSQGQQIHSL-----IFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACN 93
+S+G +H+ I + G S SL+ YAK G + +A+ +F+ + V CN
Sbjct: 83 LSEGGLVHARHLLDKIPQRGSISRVIYCTSLLTKYAKAGYLDEARVLFEVMPERNIVTCN 142
Query: 94 IMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIP 153
M++GY++ RLN+A +F + P K VS+T M+ + +A+E+F +M P
Sbjct: 143 AMLTGYVKCRRLNEAWTLFREMP-KNVVSWTVMLTALCDDGRSDDAVELFDEM------P 195
Query: 154 --NEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARS 211
N V+ ++++ + G + + V M + ++ Y + EA+
Sbjct: 196 ERNVVSWNTLVTGLIRNGETEKAKQ----VFDAMPSRDAVSWNAMIKGYIENGGMEEAKL 251
Query: 212 LFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEA 271
LF+ M E+N+V+W M+ G+ + G V A LF +P ++VVSW MI G+ E EA
Sbjct: 252 LFENMSEKNVVTWTSMVYGYCRYGDVHEAYRLFCEMPERNVVSWTAMISGFAWNEFYREA 311
Query: 272 LTMYRAML--CDGIAPNDVMIVDLISACGR-AMAFGE-GLQIHSIIVKAGFDCYDF---I 324
L ++ M D I+PN ++ L ACG + F G Q+H+ ++ G++ D +
Sbjct: 312 LMLFLEMKKDVDAISPNGETLISLAYACGGLGVGFRRLGEQLHAQVISNGWESVDHDGRL 371
Query: 325 QATIIHFYAACGRI----NLARLQFEL---------------------------GIKDHI 353
+++H YA+ G I +L F+L + D +
Sbjct: 372 AKSLVHMYASFGLIASAQSLLNESFDLQSCNIIISAYLKNGDFERAETLFRRVESLHDKV 431
Query: 354 ASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDA 413
SW ++I G++ G + A LF + +D +W+ MISG QNE A L MV
Sbjct: 432 -SWTSMIDGYLDAGDVSRAFDLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRC 490
Query: 414 GVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDN--LSAAIIDMYAKCGSIN 471
G+KP T + + ++ L +G+ H + + + + L +++ MYAKCG+I+
Sbjct: 491 GLKPLNSTYSVLLSSAGATSNLDQGKHLHCVIAKTTACYDPDLILQNSLVSMYAKCGAID 550
Query: 472 TAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLST 531
A+E+F + + + WN++I GL+ HG A+ LK++ ++ +K NS+TF+GVLS
Sbjct: 551 DAYEIFSKMVRK--DIVSWNSVIIGLSHHGLADKALKLFKEMLDSGMKPNSVTFLGVLSA 608
Query: 532 CCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVV 591
C H+GL+ G FK+MK Y+++P ++HY M+DLLGRAG+L++AEE I ++P D
Sbjct: 609 CSHSGLITKGLELFKAMKETYSIQPGVEHYISMIDLLGRAGKLKEAEEFISALPFTPDHT 668
Query: 592 IWGTLLAAS----RIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIR 647
++G LL R + ERAA L L P + P V L N+YA GR E +R
Sbjct: 669 VYGALLGLCGLNWRDRDAAGIAERAAMRLLELDPVNAPGHVALCNMYAGLGRHEMEKEMR 728
Query: 648 KEMRDCGMKRLPGFSGVV 665
KEM G+K+ PG S VV
Sbjct: 729 KEMGIKGVKKTPGCSWVV 746
>gi|449438685|ref|XP_004137118.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cucumis sativus]
gi|449528041|ref|XP_004171015.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cucumis sativus]
Length = 868
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 187/635 (29%), Positives = 312/635 (49%), Gaps = 95/635 (14%)
Query: 28 SALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTL 87
S R C+ A G Q+H K+ S+ + + +++YAKC
Sbjct: 263 SVFRSCAGLSASRLGTQLHCHALKTDFGSDVIVGTATLDMYAKC---------------- 306
Query: 88 DPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMR 147
D ++DA ++F P SY +MI+G+A+N+ +A ++F ++
Sbjct: 307 ---------------DNMSDAYKLFSLLPDHNLQSYNAMIIGYARNEQGFQAFKLFLQLQ 351
Query: 148 ILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLV 207
+EV+L+ +S++ + G E LHGL IK + + ++ +L+MY C +LV
Sbjct: 352 KNSFSFDEVSLSGALSAAAVIKGHSEGLQLHGLAIKSNLSSNICVANAILDMYGKCGALV 411
Query: 208 EARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVER 267
E A LF+ + +D VSW +I Q E
Sbjct: 412 E-------------------------------ASGLFDEMEIRDPVSWNAIITACEQNES 440
Query: 268 LSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQAT 327
+ L+ + AML + P++ ++ AC AF G+++H I+K+G F+ +
Sbjct: 441 EGKTLSHFGAMLRSKMEPDEFTYGSVLKACAGQRAFSNGMEVHGRIIKSGMGLKMFVGSA 500
Query: 328 IIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSW 387
++ Y+ CG M+E+A ++ ++++ + SW
Sbjct: 501 LVDMYSKCG-------------------------------MMEEAEKIHYRLEEQTMVSW 529
Query: 388 SAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLN 447
+A+ISG++ ++ + F M++ GV+P+ T +V A+ T+ G+ H ++
Sbjct: 530 NAIISGFSLQKKSEDSQRFFSHMLEMGVEPDNFTYATVLDTCANLATVGLGKQIHAQMIK 589
Query: 448 NSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTL 507
+ + +++ ++DMY+KCG+++ + +F R + WNA+ICG A HG L
Sbjct: 590 LELLSDVYITSTLVDMYSKCGNMHDSLLMFRKAPKRDSVT--WNAMICGFAYHGLGEEAL 647
Query: 508 KIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDL 567
+++ + NIK N TF+ VL C H G G YF+ M S+Y +EP L+HY CMVD+
Sbjct: 648 ELFEHMLHENIKPNHATFVSVLRACSHVGNAKKGLFYFQKMASIYALEPQLEHYSCMVDI 707
Query: 568 LGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSR 627
LGR+GQ+E+A +I+ MP +AD +IW TLL+ +I GNVEV E+AA SL L P +
Sbjct: 708 LGRSGQVEEALRLIQDMPFEADAIIWRTLLSICKIQGNVEVAEKAASSLLKLDPEDSSAY 767
Query: 628 VLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
LLSNIYADAG W+ IR+ MR +K+ PG S
Sbjct: 768 TLLSNIYADAGMWQQVSKIRQTMRSHNLKKEPGCS 802
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 143/595 (24%), Positives = 256/595 (43%), Gaps = 91/595 (15%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
+ CS A+ G++ H+ + SG F+ N LI +Y KC + A +F+ D
Sbjct: 31 FQECSNRRALKPGKEAHAHMILSGFTPTVFVTNCLIQMYVKCCALEYAYKVFEEMPQRDI 90
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKC-CVSYTSMIMGFAQNDCWREALEVFRDMRI 148
V+ N M+ G R+ A+ VF+ P VS+ S+I G+ QN ++++ VF MR
Sbjct: 91 VSWNTMVFGCAGAGRMELAQAVFNSMPHHGDVVSWNSLISGYLQNGDIQKSIAVFLKMRD 150
Query: 149 LGVIPNEVTLASVISSSVHLGGIWECRML----HGLVIKLMIDGFVIISTNLLNMYCVCS 204
LGV+ + TLA S+ + + E ++L HG+ +++ D V+ + L++MY C+
Sbjct: 151 LGVMFDHTTLAV----SLKICSLLEDQVLGIQIHGIAVQMGFDYDVVTGSALVDMYAKCN 206
Query: 205 SLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQ 264
SL E + ++F +P K+ +SW I G +Q
Sbjct: 207 SL-------------------------------EDSLDVFSELPDKNWISWSAAIAGCVQ 235
Query: 265 VERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFI 324
++L L +++ M GI + + +C A G Q+H +K F +
Sbjct: 236 NDQLLRGLKLFKEMQRKGIGVSQSTYASVFRSCAGLSASRLGTQLHCHALKTDFGSDVIV 295
Query: 325 QATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDV 384
+ YA C ++ A F L ++ S+NA+I G+ RN A +LF +QK +
Sbjct: 296 GTATLDMYAKCDNMSDAYKLFSLLPDHNLQSYNAMIIGYARNEQGFQAFKLFLQLQK-NS 354
Query: 385 YSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEY 444
+S+ +E+++ A A EG H
Sbjct: 355 FSF------------------------------DEVSLSGALSAAAVIKGHSEGLQLHGL 384
Query: 445 VLNNSITLNDNLSAAIIDMYAKCGSINTAFEVF--YHIRDRTTSVSPWNAIICGLAMHGD 502
+ ++++ N ++ AI+DMY KCG++ A +F IRD + WNAII +
Sbjct: 385 AIKSNLSSNICVANAILDMYGKCGALVEASGLFDEMEIRDPVS----WNAIITACEQNES 440
Query: 503 ANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVY----NVEPDL 558
TL + + + ++ + T+ VL C G+R F + V+ L
Sbjct: 441 EGKTLSHFGAMLRSKMEPDEFTYGSVLKACA-------GQRAFSNGMEVHGRIIKSGMGL 493
Query: 559 KHY--GCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGER 611
K + +VD+ + G +E+AE++ + + +V W +++ + E +R
Sbjct: 494 KMFVGSALVDMYSKCGMMEEAEKIHYRLEEQT-MVSWNAIISGFSLQKKSEDSQR 547
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 112/498 (22%), Positives = 197/498 (39%), Gaps = 103/498 (20%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E++L AL + S+G Q+H L KS L SN + N+++++Y KCG + +A +FD
Sbjct: 359 EVSLSGALSAAAVIKGHSEGLQLHGLAIKSNLSSNICVANAILDMYGKCGALVEASGLFD 418
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
DP VS+ ++I QN+ + L
Sbjct: 419 EMEIRDP-------------------------------VSWNAIITACEQNESEGKTLSH 447
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
F M + P+E T SV+ + +HG +IK + + + + L++MY
Sbjct: 448 FGAMLRSKMEPDEFTYGSVLKACAGQRAFSNGMEVHGRIIKSGMGLKMFVGSALVDMYSK 507
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
C + EA + ++E+ +VSWN +++GF+ E ++ F
Sbjct: 508 CGMMEEAEKIHYRLEEQTMVSWNAIISGFSLQKKSEDSQRFFSH---------------- 551
Query: 263 LQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD 322
ML G+ P++ ++ C G G QIH+ ++K
Sbjct: 552 ---------------MLEMGVEPDNFTYATVLDTCANLATVGLGKQIHAQMIKLELLSDV 596
Query: 323 FIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKR 382
+I +T++ Y+ CG ++ + L F K +WNA+I GF +G+ E+
Sbjct: 597 YITSTLVDMYSKCGNMHDSLLMFRKAPKRDSVTWNAMICGFAYHGLGEE----------- 645
Query: 383 DVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG---- 438
ALELF M+ +KPN T VSV A + G K+G
Sbjct: 646 --------------------ALELFEHMLHENIKPNHATFVSVLRACSHVGNAKKGLFYF 685
Query: 439 -RWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGL 497
+ A Y L + + ++D+ + G + A + + ++ W ++
Sbjct: 686 QKMASIYALEPQL----EHYSCMVDILGRSGQVEEALRLIQDMPFEADAI-IWRTLLSIC 740
Query: 498 AMHGDANLTLKIYSDLEK 515
+ G+ + K S L K
Sbjct: 741 KIQGNVEVAEKAASSLLK 758
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 92/352 (26%), Positives = 157/352 (44%), Gaps = 41/352 (11%)
Query: 293 LISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDH 352
+ C A G + H+ ++ +GF F+ +I Y C + A FE +
Sbjct: 30 IFQECSNRRALKPGKEAHAHMILSGFTPTVFVTNCLIQMYVKCCALEYAYKVFEEMPQRD 89
Query: 353 IASWNALIAGFIRNGMIEDARQLFNNMQKR-DVYSWSAMISGYAQNEQPNMALELFHGMV 411
I SWN ++ G G +E A+ +FN+M DV SW+++ISGY QN ++ +F M
Sbjct: 90 IVSWNTMVFGCAGAGRMELAQAVFNSMPHHGDVVSWNSLISGYLQNGDIQKSIAVFLKMR 149
Query: 412 DAGVKPNEITM-VSV-FCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGS 469
D GV + T+ VS+ C++ L G H + + +A++DMYAKC S
Sbjct: 150 DLGVMFDHTTLAVSLKICSLLEDQVL--GIQIHGIAVQMGFDYDVVTGSALVDMYAKCNS 207
Query: 470 INTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVL 529
+ + +VF + D+ + W+A I G + LK++ +++++ I ++ T+ V
Sbjct: 208 LEDSLDVFSELPDK--NWISWSAAIAGCVQNDQLLRGLKLFKEMQRKGIGVSQSTYASVF 265
Query: 530 STC-------------CHAGLVDLG----------ERYFK--SMKSVY---NVEPD--LK 559
+C CHA D G + Y K +M Y ++ PD L+
Sbjct: 266 RSCAGLSASRLGTQLHCHALKTDFGSDVIVGTATLDMYAKCDNMSDAYKLFSLLPDHNLQ 325
Query: 560 HYGCMVDLLGRAGQLEDAEEVIRSMPMKA----DVVIWGTLLAASRIHGNVE 607
Y M+ R Q A ++ + + +V + G L AA+ I G+ E
Sbjct: 326 SYNAMIIGYARNEQGFQAFKLFLQLQKNSFSFDEVSLSGALSAAAVIKGHSE 377
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 42/220 (19%), Positives = 79/220 (35%), Gaps = 54/220 (24%)
Query: 421 TMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHI 480
T +F ++ LK G+ AH +++ + T ++ +I MY KC ++ A++VF +
Sbjct: 26 TFSHIFQECSNRRALKPGKEAHAHMILSGFTPTVFVTNCLIQMYVKCCALEYAYKVFEEM 85
Query: 481 RDRTT------------------------------SVSPWNAIICGLAMHGDANLTLKIY 510
R V WN++I G +GD ++ ++
Sbjct: 86 PQRDIVSWNTMVFGCAGAGRMELAQAVFNSMPHHGDVVSWNSLISGYLQNGDIQKSIAVF 145
Query: 511 SDLEKRNIKLNSITFIGVLSTCC-----------HAGLVDLGERYFKSMKSVYNVEPDLK 559
+ + + T L C H V +G Y D+
Sbjct: 146 LKMRDLGVMFDHTTLAVSLKICSLLEDQVLGIQIHGIAVQMGFDY------------DVV 193
Query: 560 HYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAA 599
+VD+ + LED+ +V +P K + + W +A
Sbjct: 194 TGSALVDMYAKCNSLEDSLDVFSELPDK-NWISWSAAIAG 232
>gi|222616932|gb|EEE53064.1| hypothetical protein OsJ_35805 [Oryza sativa Japonica Group]
Length = 841
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 202/645 (31%), Positives = 337/645 (52%), Gaps = 45/645 (6%)
Query: 25 ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSC 84
A+VSAL + H +++ +++ F N N+++ ++ G + A+ +FD+
Sbjct: 47 AMVSALAH---HGRLAEARRL----FDEMPRRNPVSWNTMMVACSQHGRVEDARGLFDAM 99
Query: 85 STLDPVACNIMISGYIRNDRLNDAREVFDKTP-IKCCVSYTSMIMGFAQNDCWREALEVF 143
+ + IM+S Y+R L ARE+ D+ P KC Y +MI G+A+N + +A+ +
Sbjct: 100 PARNEYSWTIMVSCYVRAGELTLARELLDRMPGEKCAACYNTMISGYAKNGRFEDAIALL 159
Query: 144 RDMRILGVIPNEVTLASVI-----SSSVHLGGIWECRMLHGLVIKLMIDGFV-------- 190
++M ++ L +I S SV + L + LM++G+V
Sbjct: 160 QEMPAPDIVSWNSVLGGLIRNEEISRSVQFFDEMPDKDL--VSWNLMLEGYVRAGDLDVA 217
Query: 191 -----------IIS-TNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVE 238
+IS NL+N YC + EAR LFD M ERN+V+WNV+L+G+ + VE
Sbjct: 218 SAFFSRIPSPNVISWVNLVNGYCQAGRMGEARELFDRMPERNVVAWNVLLSGYVQFSQVE 277
Query: 239 LARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACG 298
A LF +P K+ +SW TM+ G+++ +L EA + M D + ++ +
Sbjct: 278 AAYNLFIEMPEKNSISWTTMVSGFVRSGKLQEAKDVLSKMPSDNVGAKTALMHGYL---- 333
Query: 299 RAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNA 358
++ + Q+ IV C++ T+I Y CG ++ A + F+ + SWN
Sbjct: 334 KSNLIDDARQLFDGIVVRDAVCWN----TMISGYVQCGMLDEAMVLFQQMPNKDMISWNT 389
Query: 359 LIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPN 418
+IAG + G I A +F M++R+ SW+++ISG+ QN AL+ F M +
Sbjct: 390 MIAGCAQGGQIRKAASIFRKMKRRNTVSWNSIISGFVQNGLFVEALQHFMLMRRDAKSAD 449
Query: 419 EITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFY 478
T A A+ TL+ GR H ++ + + A+I YAKCG + A +VF
Sbjct: 450 WCTYACCLSASANLATLQIGRQFHSLLVRTGFISDSSPGNALISAYAKCGRMLEARQVFD 509
Query: 479 HIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLV 538
+ + WNA+I G A +G+ + + ++ ++E +++ + IT + VLS C HAGL+
Sbjct: 510 EMV--VQDIVSWNALIDGYASNGNGSEVIAVFREMEANSVRPDEITLVVVLSACSHAGLI 567
Query: 539 DLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLA 598
D G +F SM +Y+++P +HY CMVDLLGRAG+L +A E+++ M ++ + +WG LL
Sbjct: 568 DEGLHFFNSMIKLYSLKPVAEHYTCMVDLLGRAGRLREAFELVQGMQIQPNAGVWGALLG 627
Query: 599 ASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDA 643
A R+H N E+ AA+ L L+P + VLLSNI +AG+W+DA
Sbjct: 628 ACRVHKNHEIAWLAAEKLFELEPCKASNYVLLSNICVEAGKWDDA 672
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 113/424 (26%), Positives = 190/424 (44%), Gaps = 41/424 (9%)
Query: 190 VIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPS 249
V S L L AR LF+EM RN+VS+N M++ A G + AR LF+ +P
Sbjct: 11 VFRSNQELTSLARSGQLAAARRLFEEMPRRNVVSYNAMVSALAHHGRLAEARRLFDEMPR 70
Query: 250 KDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQI 309
++ VSW TM+ Q R+ +A ++ AM A N+ ++S RA GE
Sbjct: 71 RNPVSWNTMMVACSQHGRVEDARGLFDAM----PARNEYSWTIMVSCYVRA---GELTLA 123
Query: 310 HSIIVKAGFD----CYDFIQATIIHFYAACGRIN--LARLQFELGIKDHIASWNALIAGF 363
++ + + CY+ T+I YA GR +A LQ E+ D I SWN+++ G
Sbjct: 124 RELLDRMPGEKCAACYN----TMISGYAKNGRFEDAIALLQ-EMPAPD-IVSWNSVLGGL 177
Query: 364 IRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMV 423
IRN I + Q F+ M +D+ SW+ M+ GY + ++A F + PN I+ V
Sbjct: 178 IRNEEISRSVQFFDEMPDKDLVSWNLMLEGYVRAGDLDVASAFFSRI----PSPNVISWV 233
Query: 424 SVFCAIASSGTLKEGRWAHEYVLN-NSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRD 482
++ +G + E R + + N + N LS Y + + A+ +F + +
Sbjct: 234 NLVNGYCQAGRMGEARELFDRMPERNVVAWNVLLSG-----YVQFSQVEAAYNLFIEMPE 288
Query: 483 RTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGE 542
+ S+S W ++ G G + S + N+ + G L + L+D
Sbjct: 289 K-NSIS-WTTMVSGFVRSGKLQEAKDVLSKMPSDNVGAKTALMHGYLKS----NLIDDAR 342
Query: 543 RYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRI 602
+ F + V D + M+ + G L++A + + MP K D++ W T++A
Sbjct: 343 QLFDGI-----VVRDAVCWNTMISGYVQCGMLDEAMVLFQQMPNK-DMISWNTMIAGCAQ 396
Query: 603 HGNV 606
G +
Sbjct: 397 GGQI 400
>gi|449492963|ref|XP_004159154.1| PREDICTED: uncharacterized protein LOC101226880 [Cucumis sativus]
Length = 1725
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 191/552 (34%), Positives = 290/552 (52%), Gaps = 73/552 (13%)
Query: 122 SYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLV 181
S+ S+I A+ EAL F +R LG+IP + I S L + RM H
Sbjct: 1109 SWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRMSHQQA 1168
Query: 182 IKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELAR 241
+ + +S+ L++MY C L +A R
Sbjct: 1169 FVFGFETDLFVSSALIDMYSKCGQLKDA-------------------------------R 1197
Query: 242 ELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAML--------CDGIAPNDVMIVDL 293
LF+ IP ++VVSW +MI GY+Q E+ AL +++ L + + + V++V +
Sbjct: 1198 ALFDEIPLRNVVSWTSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSV 1257
Query: 294 ISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHI 353
+SAC R G +H +VK GFD + T++ YA CG+
Sbjct: 1258 LSACSRVSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQ---------------- 1301
Query: 354 ASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMV-D 412
L++ +++F+ M+++D SW++MI+ YAQ+ ALE+FHGMV
Sbjct: 1302 ----PLVS-----------KKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRH 1346
Query: 413 AGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINT 472
GV+ N +T+ +V A A +G L+ G+ H+ V+ + N + +IIDMY KCG +
Sbjct: 1347 VGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEM 1406
Query: 473 AFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTC 532
A + F ++++ +V W A++ G MHG A L I+ + + +K N ITF+ VL+ C
Sbjct: 1407 AKKTFDRMKEK--NVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAAC 1464
Query: 533 CHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVI 592
HAGLV+ G +F +MK Y++EP ++HYGCMVDL GRAG L +A +I+ M MK D V+
Sbjct: 1465 SHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFVV 1524
Query: 593 WGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRD 652
WG+LL A RIH NV++GE AA+ L L P + VLLSN+YADAGRW D +R M++
Sbjct: 1525 WGSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLYADAGRWADVERMRMLMKN 1584
Query: 653 CGMKRLPGFSGV 664
+ + PGFS V
Sbjct: 1585 RQLVKPPGFSLV 1596
Score = 238 bits (607), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 132/403 (32%), Positives = 207/403 (51%), Gaps = 33/403 (8%)
Query: 175 RMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKA 234
R +H +I+ + +++ L+++Y + A LF +++ +WN+++
Sbjct: 44 RQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTIN 103
Query: 235 GLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLI 294
GL E +AL +Y+ M+C GIA + +I
Sbjct: 104 GLSE-------------------------------QALMLYKNMVCQGIAADKFTFPFVI 132
Query: 295 SACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIA 354
AC ++ G +H ++K GF F+Q +I FY CG A FE ++
Sbjct: 133 KACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVV 192
Query: 355 SWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAG 414
SW +I+G I G +++AR++F+ + ++V SW+AMI+GY +N+QP ALELF M
Sbjct: 193 SWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAEN 252
Query: 415 VKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAF 474
+ PNE TMVS+ A G L GR H+Y + N I + L A+IDMY+KCGSI A
Sbjct: 253 IFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAI 312
Query: 475 EVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCH 534
EVF + + S+ WN++I L +HG L ++S++E+ N+K ++ITFIGVL C H
Sbjct: 313 EVFETMPRK--SLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVH 370
Query: 535 AGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDA 577
V G YF M Y + P +HY CM +L R+ L++A
Sbjct: 371 IKNVKEGCAYFTRMTQHYGIAPIPEHYECMTELYARSNNLDEA 413
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 125/490 (25%), Positives = 221/490 (45%), Gaps = 110/490 (22%)
Query: 29 ALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLD 88
++ CSA + G+ H F G E++ F+ ++LI++Y+KCG
Sbjct: 1148 TIKSCSALCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCG---------------- 1191
Query: 89 PVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRD--- 145
+L DAR +FD+ P++ VS+TSMI G+ QN+ AL +F+D
Sbjct: 1192 ---------------QLKDARALFDEIPLRNVVSWTSMITGYVQNEQADNALLLFKDFLE 1236
Query: 146 ----MRILGVIP-NEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMY 200
+ +P + V + SV+S+ + G +HG V+K DG + + L++ Y
Sbjct: 1237 EETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAY 1296
Query: 201 CVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMID 260
C + ++ +FD M+E++ +SWN M+ +A++GL A E+F
Sbjct: 1297 AKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFH--------------- 1341
Query: 261 GYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDC 320
M R + G+ N V + ++ AC A A G IH ++K +
Sbjct: 1342 ------------GMVRHV---GVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEY 1386
Query: 321 YDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ 380
+ +II Y CGR+ +A+ F+ + ++ SW A++AG+ GM A++
Sbjct: 1387 NVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGY---GMHGRAKE------ 1437
Query: 381 KRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG-R 439
AL++F+ MV AGVKPN IT VSV A + +G ++EG
Sbjct: 1438 ----------------------ALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVEEGWH 1475
Query: 440 W----AHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIIC 495
W H+Y + I ++D++ + G +N A+ + ++ + V W +++
Sbjct: 1476 WFNAMKHKYDIEPGI----EHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFVV-WGSLLG 1530
Query: 496 GLAMHGDANL 505
+H + +L
Sbjct: 1531 ACRIHKNVDL 1540
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 113/438 (25%), Positives = 198/438 (45%), Gaps = 71/438 (16%)
Query: 43 QQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRN 102
+QIH+ I +SGL ++ + LI+LY+ G I+ A I++ I+N
Sbjct: 44 RQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYA----------------ILLFYQIQN 87
Query: 103 DRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVI 162
C ++ +I N +AL ++++M G+ ++ T VI
Sbjct: 88 ---------------PCTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVI 132
Query: 163 SSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIV 222
+ + I +++HG +IK G V + NL++ Y C A +F++M+ RN+V
Sbjct: 133 KACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVV 192
Query: 223 SWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDG 282
SW +++G G ++ AR +F+ IPSK+VVSW MI+GY++ ++ EAL +++ M +
Sbjct: 193 SWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAEN 252
Query: 283 IAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLAR 342
I PN+ +V LI AC G IH +K + ++ +I Y+ CG I A
Sbjct: 253 IFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAI 312
Query: 343 LQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNM 402
FE + + +WN++I +G+ ++A LF+ M++
Sbjct: 313 EVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMER--------------------- 351
Query: 403 ALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG-----RWAHEYVLNNSITLNDNLS 457
VKP+ IT + V CA +KEG R Y I
Sbjct: 352 ----------VNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHY----GIAPIPEHY 397
Query: 458 AAIIDMYAKCGSINTAFE 475
+ ++YA+ +++ AF+
Sbjct: 398 ECMTELYARSNNLDEAFK 415
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 141/261 (54%), Gaps = 5/261 (1%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
++ C+ +++ G+ +H + K G + F+QN+LI+ Y KCG A +F+ +
Sbjct: 132 IKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNV 191
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
V+ +ISG I L +AR +FD+ P K VS+T+MI G+ +N EALE+F+ M+
Sbjct: 192 VSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAE 251
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
+ PNE T+ S+I + +G + R +H IK I+ V + T L++MY C S+ +A
Sbjct: 252 NIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDA 311
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELF---ERIPSK-DVVSWGTMIDGYLQV 265
+F+ M +++ +WN M+ GL + A LF ER+ K D +++ ++ + +
Sbjct: 312 IEVFETMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHI 371
Query: 266 ERLSEALTMYRAMLCD-GIAP 285
+ + E + M GIAP
Sbjct: 372 KNVKEGCAYFTRMTQHYGIAP 392
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/346 (25%), Positives = 149/346 (43%), Gaps = 73/346 (21%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+ +VS L CS + +H + K G + + + N+L++ YAKCG
Sbjct: 1252 VVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCG----------- 1300
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
P+ +++VFD K +S+ SMI +AQ+ EALEVF
Sbjct: 1301 ----QPLV----------------SKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVF 1340
Query: 144 RDM-RILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
M R +GV N VTL++V+ + H G + + +H VIK+ ++ V + T++++MYC
Sbjct: 1341 HGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCK 1400
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
C + A+ FD MKE+N+ SW M+ G+ G
Sbjct: 1401 CGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHG--------------------------- 1433
Query: 263 LQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQ-----IHSIIVKAG 317
R EAL ++ M+ G+ PN + V +++AC A EG H ++ G
Sbjct: 1434 ----RAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPG 1489
Query: 318 FDCYDFIQATIIHFYAACGRINLA-RLQFELGIKDHIASWNALIAG 362
+ Y ++ + G +N A L + +K W +L+
Sbjct: 1490 IEHY----GCMVDLFGRAGCLNEAYNLIKRMKMKPDFVVWGSLLGA 1531
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 130/330 (39%), Gaps = 70/330 (21%)
Query: 308 QIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNG 367
QIH+ I+++G + +IH Y+ GRI A L
Sbjct: 45 QIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAIL------------------------ 80
Query: 368 MIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFC 427
LF +Q ++W+ +I N AL L+ MV G+ ++ T V
Sbjct: 81 -------LFYQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIK 133
Query: 428 AIASSGTLKEGRWAH----EYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDR 483
A + ++ G+ H +Y + + + +NL ID Y KCG A +VF +R R
Sbjct: 134 ACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNL----IDFYFKCGHTRFALKVFEKMRVR 189
Query: 484 -----TTSVS------------------------PWNAIICGLAMHGDANLTLKIYSDLE 514
TT +S W A+I G + L+++ ++
Sbjct: 190 NVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQ 249
Query: 515 KRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQL 574
NI N T + ++ C G++ LG R +E + ++D+ + G +
Sbjct: 250 AENIFPNEYTMVSLIKACTEMGILTLG-RGIHDYAIKNCIEIGVYLGTALIDMYSKCGSI 308
Query: 575 EDAEEVIRSMPMKADVVIWGTLLAASRIHG 604
+DA EV +MP K+ + W +++ + +HG
Sbjct: 309 KDAIEVFETMPRKS-LPTWNSMITSLGVHG 337
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 104/238 (43%), Gaps = 46/238 (19%)
Query: 22 YELALVSALRYCSAHI-AVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSM 80
Y +SA+ AH A+ G+ IH + K LE N + S+I++Y KCG
Sbjct: 1351 YNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCG-------- 1402
Query: 81 FDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREAL 140
R+ A++ FD+ K S+T+M+ G+ + +EAL
Sbjct: 1403 -----------------------RVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEAL 1439
Query: 141 EVFRDMRILGVIPNEVTLASVISSSVHLGGI-----WECRMLHGLVIKLMIDGFVIISTN 195
++F M GV PN +T SV+++ H G + W M H I+ I+ +
Sbjct: 1440 DIFYKMVRAGVKPNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGC---- 1495
Query: 196 LLNMYCVCSSLVEARSLFDEMKER-NIVSWNVMLNGFAKAGLVEL----ARELFERIP 248
+++++ L EA +L MK + + V W +L V+L A++LFE P
Sbjct: 1496 MVDLFGRAGCLNEAYNLIKRMKMKPDFVVWGSLLGACRIHKNVDLGEIAAQKLFELDP 1553
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 67/151 (44%), Gaps = 31/151 (20%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E +VS ++ C+ ++ G+ IH K+ +E ++ +LI++Y+KCG I
Sbjct: 257 EYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSI-------- 308
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
DA EVF+ P K ++ SMI + +EAL +
Sbjct: 309 -----------------------KDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEALNL 345
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWE 173
F +M + V P+ +T V+ + VH+ + E
Sbjct: 346 FSEMERVNVKPDAITFIGVLCACVHIKNVKE 376
>gi|147833409|emb|CAN68525.1| hypothetical protein VITISV_018083 [Vitis vinifera]
Length = 1796
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 200/674 (29%), Positives = 347/674 (51%), Gaps = 48/674 (7%)
Query: 25 ALVSALRYCSAHIAVSQGQQIHSLIFKSG-LESNTFIQNSLINLYAKCGLISQAKSMF-- 81
+L L C+ + ++ +G+ +H L KSG L S I N L+ +Y++C + +A+ +F
Sbjct: 8 SLARQLGSCNNYGSIYRGRXLHILFLKSGVLHSVLSIGNRLLQMYSRCNSMREAQQLFEE 67
Query: 82 -----------------------------DSCSTLDPVACNIMISGYIRNDRLNDAREVF 112
DS D + N++ISG+ + L AR +F
Sbjct: 68 MPKRNCFSWNTMIEGYLKSGSKGKSLELFDSMPHKDAFSWNVVISGFAKEGNLEVARRLF 127
Query: 113 DKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDM------RILGVIPNEVTLASVISSSV 166
++ P K +++ SMI G+A N +EA+ +F+D+ R G + LA+V+ +
Sbjct: 128 NEMPWKNGIAWNSMIHGYACNGRPKEAVGLFKDLSLNPLERFCG---DTFVLATVVGACT 184
Query: 167 HLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNV 226
+LG + + +H ++ ++ ++ ++L+N+Y C + A + + MKE + S +
Sbjct: 185 NLGALDCGKQIHARIVVDEVEFDSVLGSSLVNLYGKCGDIDSANHVLNLMKEPDAFSLSA 244
Query: 227 MLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPN 286
+++G+A G + AR +F + VV W +MI GY+ EAL ++ M G+ +
Sbjct: 245 LISGYASCGRMNDARRIFCLKSNXCVVLWNSMISGYVANNEALEALELFNNMRRKGVQED 304
Query: 287 DVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLA-RLQF 345
++SAC +G+Q+H+ + K GF I + ++ Y+ C R + A +L
Sbjct: 305 YSTFASVLSACSTLGIIDQGIQVHAHVYKVGFTNDIIIDSALVDMYSKCRRPDDACKLFS 364
Query: 346 ELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALE 405
+L D I N++I + G I+DARQ+F+ M + + SW++MI G++QN P AL+
Sbjct: 365 DLQAYDTIL-LNSMITVYSNCGRIDDARQIFDTMPSKSLISWNSMIVGFSQNACPIEALD 423
Query: 406 LFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYA 465
LF M G++ ++ ++ V A AS +L+ G + + +S +++D Y
Sbjct: 424 LFCEMNKLGLRMDKFSLAGVISACASISSLELGEQIFARATIIGLEFDQIISTSLVDFYC 483
Query: 466 KCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITF 525
KCG + ++F R + PWN+++ G A +G L ++ + ++ ITF
Sbjct: 484 KCGLVEHGRKLF--DRMMKSDEVPWNSMLMGYATNGHGIEALNVFDQMRSVGVQPTDITF 541
Query: 526 IGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMP 585
+GVLS C H GLV+ G ++F +MK Y++ P ++HY CMVDL RAG LEDA +I MP
Sbjct: 542 VGVLSACDHCGLVEEGRKWFYAMKLDYHINPGIEHYSCMVDLYARAGLLEDAMNLIEQMP 601
Query: 586 MKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFS 645
+KAD +W ++L HGN +G++ AK + L P + + V LS IYA W +
Sbjct: 602 LKADTSMWSSVLRGCVAHGNNILGKKVAKRIIDLDPENSGAYVQLSGIYATFEDWGRSAQ 661
Query: 646 IRKEMRDCGMKRLP 659
+RK M D K++P
Sbjct: 662 VRKLMYD---KKIP 672
Score = 239 bits (610), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 159/624 (25%), Positives = 299/624 (47%), Gaps = 80/624 (12%)
Query: 48 LIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLND 107
++ K G ++TF+ N ++LY++ G + + +F+ + ++ NI + ++R L
Sbjct: 735 MLIKVGFNTHTFLGNRCLDLYSQLGTGNDSLRVFEDIIDKNLISWNIFLKAFVRFGELER 794
Query: 108 AREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVIS--SS 165
AR+VFD+ P + VS+ +MI G+ + +A F +M+ G+ P+ T ++++S SS
Sbjct: 795 ARDVFDEMPKRDVVSWNTMISGYVSFGLFDDAFRFFSEMQKAGIRPSGFTYSTLLSFVSS 854
Query: 166 VHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWN 225
G + +H +I+ +D N+V N
Sbjct: 855 ACRG-----KQIHASMIRNGVD------------------------------LSNVVVGN 879
Query: 226 VMLNGFAKAGLVELARELFERIPSKDVVSWGTMI-----DGYLQVERLSEALTMYRAMLC 280
++ + K G+V+ A +F + D++SW ++I GY + AL + M
Sbjct: 880 SLIGMYGKFGVVDYAFGVFITMEELDIISWNSLIWSCGKSGYQNL-----ALRQFVLMRS 934
Query: 281 DGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINL 340
G +P+ + +I+ C +G QI ++ ++ GF + + I ++ C R+
Sbjct: 935 VGYSPDQFTVSTVITVCSNLQDLEKGEQIFALCIRVGFLSNSIVSSASIDLFSKCNRL-- 992
Query: 341 ARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQP 400
ED+ ++F + + D +AMIS YA +
Sbjct: 993 -----------------------------EDSVRVFEEIYQWDSVLCNAMISSYAWHGFG 1023
Query: 401 NMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAI 460
AL+LF + ++P E T+ V A++ + +G H V+ + + + +++++
Sbjct: 1024 ENALQLFVLTLRENLRPTEFTLSIVLSAVSILLPVDQGSQIHSLVVKSGLESDVIVASSL 1083
Query: 461 IDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKL 520
++MYAK G I++A + F I R + WN +I GLA +G + L+I+ +L
Sbjct: 1084 VEMYAKFGLIDSAMKTFAKIGAR--DLISWNTMIMGLAYNGRVSKALEIFKELLIGGPPP 1141
Query: 521 NSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEV 580
+ IT GVL C GLVD G F SM+ Y V P ++HY C+VD++ R G+L++A ++
Sbjct: 1142 DEITLAGVLLACNVGGLVDEGLSIFSSMEKEYGVIPAIEHYACIVDMMSRGGKLKEAMDI 1201
Query: 581 IRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRW 640
+ MP + +IWG+LL A I+G++ ER A+ + L+P ++L+ Y GRW
Sbjct: 1202 VELMPHEPSGLIWGSLLCACEIYGDLRFTERVAERVMELEPQSSLPYLVLAQAYEMRGRW 1261
Query: 641 EDAFSIRKEMRDCGMKRLPGFSGV 664
E + + M++ G++++ G S +
Sbjct: 1262 ESLVRVXRAMKEKGVRKVIGCSWI 1285
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 156/661 (23%), Positives = 281/661 (42%), Gaps = 95/661 (14%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
+ +L + C++ ++ G+QI + GLE + I SL++ Y KCGL+ + +FD
Sbjct: 437 KFSLAGVISACASISSLELGEQIFARATIIGLEFDQIISTSLVDFYCKCGLVEHGRKLFD 496
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
D V N SM+MG+A N EAL V
Sbjct: 497 RMMKSDEVPWN-------------------------------SMLMGYATNGHGIEALNV 525
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRM-LHGLVIKLMIDGFVIISTNLLNMYC 201
F MR +GV P ++T V+S+ H G + E R + + + I+ + + ++++Y
Sbjct: 526 FDQMRSVGVQPTDITFVGVLSACDHCGLVEEGRKWFYAMKLDYHINPGIEHYSCMVDLYA 585
Query: 202 VCSSLVEARSLFDEMKERNIVS-WNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMID 260
L +A +L ++M + S W+ +L G G L +++ +RI D + G
Sbjct: 586 RAGLLEDAMNLIEQMPLKADTSMWSSVLRGCVAHGNNILGKKVAKRIIDLDPENSG---- 641
Query: 261 GYLQVERLSEALTMY------RAMLCDGIAPNDV-------------------------- 288
Y+Q+ + + R ++ D P D
Sbjct: 642 AYVQLSGIYATFEDWGRSAQVRKLMYDKKIPKDTSFDIAGEEGXEGLSSETKEVTKMKQR 701
Query: 289 --MIVDLISACGRA--------MAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRI 338
+++ L++ R MA L +++K GF+ + F+ + Y+ G
Sbjct: 702 QNLVLRLVAEKKRECDERDQKFMAARRTLLEFDMLIKVGFNTHTFLGNRCLDLYSQLGTG 761
Query: 339 NLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNE 398
N + FE I ++ SWN + F+R G +E AR +F+ M KRDV SW+ MISGY
Sbjct: 762 NDSLRVFEDIIDKNLISWNIFLKAFVRFGELERARDVFDEMPKRDVVSWNTMISGYVSFG 821
Query: 399 QPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITL-NDNLS 457
+ A F M AG++P+ T ++ ++S+ G+ H ++ N + L N +
Sbjct: 822 LFDDAFRFFSEMQKAGIRPSGFTYSTLLSFVSSAC---RGKQIHASMIRNGVDLSNVVVG 878
Query: 458 AAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRN 517
++I MY K G ++ AF VF + + + WN++I G NL L+ + +
Sbjct: 879 NSLIGMYGKFGVVDYAFGVFITMEE--LDIISWNSLIWSCGKSGYQNLALRQFVLMRSVG 936
Query: 518 IKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDA 577
+ T V++ C + ++ GE+ F V + + +DL + +LED+
Sbjct: 937 YSPDQFTVSTVITVCSNLQDLEKGEQIFALCIRVGFLSNSIVS-SASIDLFSKCNRLEDS 995
Query: 578 EEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLA-----GLQPSHGPSRVLLSN 632
V + + D V+ ++++ HG GE A + L+P+ ++LS
Sbjct: 996 VRVFEEI-YQWDSVLCNAMISSYAWHG---FGENALQLFVLTLRENLRPTEFTLSIVLSA 1051
Query: 633 I 633
+
Sbjct: 1052 V 1052
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 81/158 (51%), Gaps = 34/158 (21%)
Query: 14 KANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGL 73
+ NL+ +++ L++V L S + V QG QIHSL+ KSGLES+ + +SL+ +YAK GL
Sbjct: 1035 RENLRPTEFTLSIV--LSAVSILLPVDQGSQIHSLVVKSGLESDVIVASSLVEMYAKFGL 1092
Query: 74 ISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQN 133
I A F D ++ N MI G N R++
Sbjct: 1093 IDSAMKTFAKIGARDLISWNTMIMGLAYNGRVS--------------------------- 1125
Query: 134 DCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGI 171
+ALE+F+++ I G P+E+TLA V+ + ++GG+
Sbjct: 1126 ----KALEIFKELLIGGPPPDEITLAGVL-LACNVGGL 1158
>gi|15233590|ref|NP_193861.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207660|sp|Q9STE1.1|PP333_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21300
gi|3402749|emb|CAA20195.1| putative protein [Arabidopsis thaliana]
gi|7268926|emb|CAB79129.1| putative protein [Arabidopsis thaliana]
gi|332659037|gb|AEE84437.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 857
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 184/634 (29%), Positives = 323/634 (50%), Gaps = 96/634 (15%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
L C++ + + G Q+H L+ SG++ I+NSL+++Y+KCG
Sbjct: 246 LSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCG----------------- 288
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
R +DA ++F V++ MI G+ Q+ E+L F +M
Sbjct: 289 --------------RFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISS 334
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
GV+P+ +T +S++ S + C+ +H +++ I + +++ L++ Y C
Sbjct: 335 GVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRG---- 390
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLS 269
V +A+ +F + S DVV + MI GYL
Sbjct: 391 ---------------------------VSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYI 423
Query: 270 EALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATII 329
++L M+R ++ I+PN++ +V ++ G +A G ++H I+K GFD I +I
Sbjct: 424 DSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVI 483
Query: 330 HFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSA 389
YA CGR+NLA ++F + KRD+ SW++
Sbjct: 484 DMYAKCGRMNLAY-------------------------------EIFERLSKRDIVSWNS 512
Query: 390 MISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNS 449
MI+ AQ++ P+ A+++F M +G+ + +++ + A A+ + G+ H +++ +S
Sbjct: 513 MITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHS 572
Query: 450 ITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKI 509
+ + + +IDMYAKCG++ A VF ++++ ++ WN+II HG +L +
Sbjct: 573 LASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEK--NIVSWNSIIAACGNHGKLKDSLCL 630
Query: 510 YSDL-EKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLL 568
+ ++ EK I+ + ITF+ ++S+CCH G VD G R+F+SM Y ++P +HY C+VDL
Sbjct: 631 FHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLF 690
Query: 569 GRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRV 628
GRAG+L +A E ++SMP D +WGTLL A R+H NVE+ E A+ L L PS+ V
Sbjct: 691 GRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYV 750
Query: 629 LLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
L+SN +A+A WE +R M++ ++++PG+S
Sbjct: 751 LISNAHANAREWESVTKVRSLMKEREVQKIPGYS 784
Score = 179 bits (453), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 143/648 (22%), Positives = 263/648 (40%), Gaps = 134/648 (20%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
L+ CS + QG+Q+H+ + + + +++ ++ +YA CG S MF
Sbjct: 42 LQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMF-------- 93
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
Y + R + R + S+I F +N +AL + M
Sbjct: 94 ---------YRLDLRRSSIRP------------WNSIISSFVRNGLLNQALAFYFKMLCF 132
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
GV P+ T ++ + V L L V L +D ++++L+ Y +
Sbjct: 133 GVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVP 192
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLS 269
LFD + +++ V WNVMLNG+AK G ++ ++I G
Sbjct: 193 SKLFDRVLQKDCVIWNVMLNGYAKCGALD------------------SVIKG-------- 226
Query: 270 EALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATII 329
+ M D I+PN V ++S C + G+Q+H ++V +G D I+ +++
Sbjct: 227 -----FSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLL 281
Query: 330 HFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKR------- 382
Y+ CGR + A F + + +WN +I+G++++G++E++ F M
Sbjct: 282 SMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAI 341
Query: 383 --------------------------------DVYSWSAMISGYAQNEQPNMALELFHG- 409
D++ SA+I Y + +MA +F
Sbjct: 342 TFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQC 401
Query: 410 ------------------------------MVDAGVKPNEITMVSVFCAIASSGTLKEGR 439
+V + PNEIT+VS+ I LK GR
Sbjct: 402 NSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGR 461
Query: 440 WAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAM 499
H +++ N+ A+IDMYAKCG +N A+E+F + R + WN++I A
Sbjct: 462 ELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKR--DIVSWNSMITRCAQ 519
Query: 500 HGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLK 559
+ + + I+ + I + ++ LS C + G+ M +++ D+
Sbjct: 520 SDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIK-HSLASDVY 578
Query: 560 HYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVE 607
++D+ + G L+ A V ++M K ++V W +++AA HG ++
Sbjct: 579 SESTLIDMYAKCGNLKAAMNVFKTMKEK-NIVSWNSIIAACGNHGKLK 625
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 136/289 (47%), Gaps = 40/289 (13%)
Query: 20 SDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKS 79
S E+ LVS L +A+ G+++H I K G ++ I ++I++YAKCG ++ A
Sbjct: 438 SPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYE 497
Query: 80 MFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREA 139
+F+ S D V S+ SMI AQ+D A
Sbjct: 498 IFERLSKRDIV-------------------------------SWNSMITRCAQSDNPSAA 526
Query: 140 LEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNM 199
+++FR M + G+ + V++++ +S+ +L + +HG +IK + V + L++M
Sbjct: 527 IDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDM 586
Query: 200 YCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSK-----DVVS 254
Y C +L A ++F MKE+NIVSWN ++ G ++ + LF + K D ++
Sbjct: 587 YAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQIT 646
Query: 255 WGTMIDGYLQVERLSEALTMYRAMLCD-GIAPND---VMIVDLISACGR 299
+ +I V + E + +R+M D GI P +VDL GR
Sbjct: 647 FLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGR 695
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/317 (21%), Positives = 137/317 (43%), Gaps = 37/317 (11%)
Query: 293 LISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRI-NLARLQFELGI-K 350
L+ AC +G Q+H+ ++ + I+ YA CG + ++ + L + +
Sbjct: 41 LLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRR 100
Query: 351 DHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGM 410
I WN++I+ F+RNG++ N AL + M
Sbjct: 101 SSIRPWNSIISSFVRNGLL-------------------------------NQALAFYFKM 129
Query: 411 VDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSI 470
+ GV P+ T + A + K + + V + + N+ +++++I Y + G I
Sbjct: 130 LCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKI 189
Query: 471 NTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLS 530
+ ++F + + + WN ++ G A G + +K +S + I N++TF VLS
Sbjct: 190 DVPSKLFDRVLQKDCVI--WNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLS 247
Query: 531 TCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADV 590
C L+DLG + + V V+ + ++ + + G+ +DA ++ R M +AD
Sbjct: 248 VCASKLLIDLGVQ-LHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMS-RADT 305
Query: 591 VIWGTLLAASRIHGNVE 607
V W +++ G +E
Sbjct: 306 VTWNCMISGYVQSGLME 322
>gi|356510957|ref|XP_003524199.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Glycine max]
Length = 617
Score = 322 bits (825), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 169/472 (35%), Positives = 272/472 (57%), Gaps = 12/472 (2%)
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAK-------AGLVELARELFERIPSKDVVSW 255
CSSL +A+ + ++ +N+ + +L + L R LF ++ + + +W
Sbjct: 18 CSSLNQAKEVHAQIYIKNLQQSSYVLTKLLRLVTALPHVPLHSYPRLLFSQLHTPNPFAW 77
Query: 256 GTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHS-IIV 314
+I Y LS+AL+ Y +M ++P L SAC G Q+H+ ++
Sbjct: 78 TALIRAYALRGPLSQALSFYSSMRKRRVSPISFTFSALFSACAAVRHSALGAQLHAQTLL 137
Query: 315 KAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQ 374
GF ++ +I Y CG + AR+ F+ + + SW LI + R G + AR
Sbjct: 138 LGGFSSDLYVNNAVIDMYVKCGSLRCARMVFDEMPERDVISWTGLIVAYTRIGDMRAARD 197
Query: 375 LFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGT 434
LF+ + +D+ +W+AM++GYAQN P ALE+F + D GV+ +E+T+V V A A G
Sbjct: 198 LFDGLPVKDMVTWTAMVTGYAQNAMPMDALEVFRRLRDEGVEIDEVTLVGVISACAQLGA 257
Query: 435 LKEGRWAHEYVLNNSITLNDNL--SAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNA 492
K W + ++ + DN+ +A+IDMY+KCG++ A++VF +R+R +V +++
Sbjct: 258 SKYANWIRDIAESSGFGVGDNVLVGSALIDMYSKCGNVEEAYDVFKGMRER--NVFSYSS 315
Query: 493 IICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVY 552
+I G A+HG A +K++ D+ + +K N +TF+GVL+ C HAGLVD G++ F SM+ Y
Sbjct: 316 MIVGFAIHGRARAAIKLFYDMLETGVKPNHVTFVGVLTACSHAGLVDQGQQLFASMEKCY 375
Query: 553 NVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERA 612
V P + Y CM DLL RAG LE A +++ +MPM++D +WG LL AS +HGN +V E A
Sbjct: 376 GVAPTAELYACMTDLLSRAGYLEKALQLVETMPMESDGAVWGALLGASHVHGNPDVAEIA 435
Query: 613 AKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
+K L L+P + + +LLSN YA AGRW+D +RK +R+ +K+ PG+S V
Sbjct: 436 SKRLFELEPDNIGNYLLLSNTYASAGRWDDVSKVRKLLREKNLKKNPGWSWV 487
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 125/506 (24%), Positives = 236/506 (46%), Gaps = 76/506 (15%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYA---KCGLISQAKS 79
E +V L CS+ ++Q +++H+ I+ L+ ++++ L+ L L S +
Sbjct: 8 EWEVVRILERCSS---LNQAKEVHAQIYIKNLQQSSYVLTKLLRLVTALPHVPLHSYPRL 64
Query: 80 MFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREA 139
+F T +P A +T++I +A +A
Sbjct: 65 LFSQLHTPNPFA-------------------------------WTALIRAYALRGPLSQA 93
Query: 140 LEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGF---VIISTNL 196
L + MR V P T +++ S+ + LH L++ GF + ++ +
Sbjct: 94 LSFYSSMRKRRVSPISFTFSALFSACAAVRHSALGAQLHAQT--LLLGGFSSDLYVNNAV 151
Query: 197 LNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWG 256
++MY C SL AR +FDEM ER+++SW ++ + + G + AR+LF+ +P KD+V+W
Sbjct: 152 IDMYVKCGSLRCARMVFDEMPERDVISWTGLIVAYTRIGDMRAARDLFDGLPVKDMVTWT 211
Query: 257 TMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKA 316
M+ GY Q +AL ++R + +G+ ++V +V +ISAC + A I I +
Sbjct: 212 AMVTGYAQNAMPMDALEVFRRLRDEGVEIDEVTLVGVISACAQLGASKYANWIRDIAESS 271
Query: 317 GFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLF 376
GF G+ D++ +ALI + + G +E+A +F
Sbjct: 272 GF-----------------------------GVGDNVLVGSALIDMYSKCGNVEEAYDVF 302
Query: 377 NNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLK 436
M++R+V+S+S+MI G+A + + A++LF+ M++ GVKPN +T V V A + +G +
Sbjct: 303 KGMRERNVFSYSSMIVGFAIHGRARAAIKLFYDMLETGVKPNHVTFVGVLTACSHAGLVD 362
Query: 437 EGRWAHEYVLN-NSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIIC 495
+G+ + + L A + D+ ++ G + A ++ + + + W A++
Sbjct: 363 QGQQLFASMEKCYGVAPTAELYACMTDLLSRAGYLEKALQLVETMPMESDG-AVWGALLG 421
Query: 496 GLAMHGD---ANLTLKIYSDLEKRNI 518
+HG+ A + K +LE NI
Sbjct: 422 ASHVHGNPDVAEIASKRLFELEPDNI 447
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 109/409 (26%), Positives = 181/409 (44%), Gaps = 72/409 (17%)
Query: 2 PLDHFHSVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHS-LIFKSGLESNTFI 60
PL S ++S + + S + C+A + G Q+H+ + G S+ ++
Sbjct: 89 PLSQALSFYSSMRKR-RVSPISFTFSALFSACAAVRHSALGAQLHAQTLLLGGFSSDLYV 147
Query: 61 QNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCC 120
N++I++Y KCG + A+ +FD D ++ +I Y R + AR++FD P+K
Sbjct: 148 NNAVIDMYVKCGSLRCARMVFDEMPERDVISWTGLIVAYTRIGDMRAARDLFDGLPVKDM 207
Query: 121 VSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGL 180
V++T+M+ G+AQN +ALEVFR +R GV +EVTL VIS+ LG + +
Sbjct: 208 VTWTAMVTGYAQNAMPMDALEVFRRLRDEGVEIDEVTLVGVISACAQLGASKYANWIRDI 267
Query: 181 VIKLMIDGF-----VIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAG 235
GF V++ + L++MY C ++ EA +F M+ERN+ S++ M+ GFA G
Sbjct: 268 AES---SGFGVGDNVLVGSALIDMYSKCGNVEEAYDVFKGMRERNVFSYSSMIVGFAIHG 324
Query: 236 LVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLIS 295
R A+ ++ ML G+ PN V V +++
Sbjct: 325 -------------------------------RARAAIKLFYDMLETGVKPNHVTFVGVLT 353
Query: 296 ACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIAS 355
AC A +G Q+ + + K CY A YA + D ++
Sbjct: 354 ACSHAGLVDQGQQLFASMEK----CYGV--APTAELYAC--------------MTDLLS- 392
Query: 356 WNALIAGFIRNGMIEDARQLFNNMQ-KRDVYSWSAMISGYAQNEQPNMA 403
R G +E A QL M + D W A++ + P++A
Sbjct: 393 ---------RAGYLEKALQLVETMPMESDGAVWGALLGASHVHGNPDVA 432
>gi|359497798|ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 809
Score = 322 bits (825), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 198/644 (30%), Positives = 324/644 (50%), Gaps = 93/644 (14%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSG-LESNTFIQNSLINLYAKCGLISQAKSMF 81
E + +R CS G+ I+ + K+G LE++ + LI+++ K
Sbjct: 128 EYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVK----------- 176
Query: 82 DSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALE 141
+ L A +VFDK P + V++T MI FAQ C R+A++
Sbjct: 177 -------------------GSGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDAID 217
Query: 142 VFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYC 201
+F DM + G +P+ T +SV+S+ LG + + LH VI+L + V + +L++MY
Sbjct: 218 LFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYA 277
Query: 202 VCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDG 261
C A G V+ +R++FE++P +V+SW +I
Sbjct: 278 KC----------------------------AADGSVDDSRKVFEQMPEHNVMSWTAIITA 309
Query: 262 YLQV-ERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDC 320
Y+Q E EA+ ++ M+ I PN ++ ACG G Q++S VK
Sbjct: 310 YVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVK----- 364
Query: 321 YDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ 380
LGI N+LI+ + R+G +EDAR+ F+ +
Sbjct: 365 --------------------------LGIASVNCVGNSLISMYARSGRMEDARKAFDILF 398
Query: 381 KRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRW 440
++++ S++A++ GYA+N + A LF+ + D G+ + T S+ AS G + +G
Sbjct: 399 EKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQ 458
Query: 441 AHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMH 500
H +L N + A+I MY++CG+I AF+VF + DR +V W ++I G A H
Sbjct: 459 IHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDR--NVISWTSMITGFAKH 516
Query: 501 GDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKH 560
G A L+++ + + K N IT++ VLS C H G++ G+++F SM + + P ++H
Sbjct: 517 GFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEH 576
Query: 561 YGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQ 620
Y CMVDLLGR+G L +A E I SMP+ AD ++W TLL A R+HGN E+G AA+ + +
Sbjct: 577 YACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQE 636
Query: 621 PSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
P + +LLSN++A AG+W+D IRK M++ + + G S +
Sbjct: 637 PDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWI 680
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 95/380 (25%), Positives = 175/380 (46%), Gaps = 47/380 (12%)
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSK-DVVSWGTMIDGYLQVERL 268
R L E + V N +++ ++K G E AR +FE + +K D+VSW M+ +
Sbjct: 50 RKLMQSGLELDSVVLNTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSME 109
Query: 269 SEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATI 328
+A+ + ML G PN+ +I AC A G I+ +VK G +++A +
Sbjct: 110 WQAIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTG-----YLEADV 164
Query: 329 IHFYAACGRINLARLQFELGIKDHIASWNALIAGFIR-NGMIEDARQLFNNMQKRDVYSW 387
C I++ F++ +G + A ++F+ M +R++ +W
Sbjct: 165 C---VGCELIDM----------------------FVKGSGDLGSAYKVFDKMPERNLVTW 199
Query: 388 SAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLN 447
+ MI+ +AQ A++LF M +G P+ T SV A G L G+ H V+
Sbjct: 200 TLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIR 259
Query: 448 NSITLNDNLSAAIIDMYAKC---GSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDAN 504
+ L+ + +++DMYAKC GS++ + +VF + + +V W AII G+ +
Sbjct: 260 LGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEH--NVMSWTAIITAYVQSGECD 317
Query: 505 L-TLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGC 563
++++ + +I+ N +F VL C + GE+ + Y V+ + C
Sbjct: 318 KEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYS-----YAVKLGIASVNC 372
Query: 564 ----MVDLLGRAGQLEDAEE 579
++ + R+G++EDA +
Sbjct: 373 VGNSLISMYARSGRMEDARK 392
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 92/371 (24%), Positives = 162/371 (43%), Gaps = 46/371 (12%)
Query: 263 LQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD 322
L V RL A + M P+ L+ +C R F G +H ++++G +
Sbjct: 2 LDVGRLHHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDS 61
Query: 323 FIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNM-QK 381
+ T+I Y+ CG E AR +F M K
Sbjct: 62 VVLNTLISLYSKCGDT-------------------------------ETARLIFEGMGNK 90
Query: 382 RDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWA 441
RD+ SWSAM+S +A N A+ F M++ G PNE +V A +++ G
Sbjct: 91 RDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWVGEII 150
Query: 442 HEYVLNNSITLND-NLSAAIIDMYAK-CGSINTAFEVFYHIRDRTTSVSPWNAIICGLAM 499
+ +V+ D + +IDM+ K G + +A++VF + +R ++ W +I A
Sbjct: 151 YGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPER--NLVTWTLMITRFAQ 208
Query: 500 HGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLK 559
G A + ++ D+E + T+ VLS C GL+ LG++ + + + D+
Sbjct: 209 LGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRL-GLALDVC 267
Query: 560 HYGC-MVDLLGRA---GQLEDAEEVIRSMPMKADVVIWGTLLAASRIHG--NVEVGERAA 613
GC +VD+ + G ++D+ +V MP + +V+ W ++ A G + E E
Sbjct: 268 -VGCSLVDMYAKCAADGSVDDSRKVFEQMP-EHNVMSWTAIITAYVQSGECDKEAIELFC 325
Query: 614 KSLAG-LQPSH 623
K ++G ++P+H
Sbjct: 326 KMISGHIRPNH 336
>gi|357156786|ref|XP_003577575.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Brachypodium distachyon]
Length = 694
Score = 322 bits (824), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 199/642 (30%), Positives = 332/642 (51%), Gaps = 40/642 (6%)
Query: 49 IFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDA 108
+F NT N++I + G ++ A+ +FD+ D + +M+S Y R L A
Sbjct: 64 LFDEIPRRNTVSWNAMIAACSDHGRVADARDLFDAMPARDGFSWTLMVSCYARAGELGLA 123
Query: 109 REVFDKTP-IKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVH 167
R+ D+ P KC Y +MI G+A++ + +A+ + R+M +I L + +
Sbjct: 124 RDALDRMPGDKCTACYNAMISGYAKHGRFDDAVALLREMPAPDIISWNSVLVGLTRNGEM 183
Query: 168 LGGIW---ECRMLHGLVIKLMIDGFV--------------IISTN------LLNMYCVCS 204
+ + E + LM++G+V + S N LLN YC
Sbjct: 184 VRAVKFFDEMPARDMVSWNLMLEGYVRAGDVDSAAGLFAGVPSPNVVSWVTLLNGYCRAG 243
Query: 205 SLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQ 264
+ EAR LFD + +RN+ +WNVML+G+ + +E A +LF +P K+ +SW TMI ++
Sbjct: 244 RIGEARELFDRIPDRNVAAWNVMLSGYLRLSHMEEAYKLFTEMPDKNSISWTTMISALVR 303
Query: 265 VERLSEALTMYRAMLCDGIAPNDVMIVDLISA--CGRAMAFGEGLQIHSIIVKAGFDCYD 322
+L EA + M D A ++ + + A +GL++ + C++
Sbjct: 304 GGKLQEAKDLLDKMPFDSFAAKTALMHGYLQSKMIDDARLIFDGLEVRDAV------CWN 357
Query: 323 FIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKR 382
T+I Y CG ++ A + F+ + SWN +IAG+ +G + A +F M +R
Sbjct: 358 ----TMISGYVHCGMLDEAMVLFQQMPNKDMVSWNTMIAGYAHDGQMRKAVGIFRKMNQR 413
Query: 383 DVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAH 442
+ SW+++ISG+ QN AL+ F M + + T A A L GR H
Sbjct: 414 NTVSWNSVISGFVQNGLCVEALQHFVLMRRDAKRADWSTYACCLSACADLAALHVGRQFH 473
Query: 443 EYVLNNSITLNDNLSA-AIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHG 501
+L S + D+ + A+I YAKCG I A +VF + + WNA+I G A +G
Sbjct: 474 S-LLARSGYIGDSFAGNALISAYAKCGRILEARQVFDEM--PAPDIVSWNALIDGYASNG 530
Query: 502 DANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHY 561
+ ++ ++E +++ + +TF+GVLS C HAGL+D G +F SM Y + P +HY
Sbjct: 531 HGTEAISVFREMEDNDVRPDEVTFVGVLSACSHAGLIDEGFDFFNSMTKDYALRPVAEHY 590
Query: 562 GCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQP 621
CMVDLLGR+G+L +A E+I+ M ++ + +WG +L A R+H N E+ + AA+ L L+P
Sbjct: 591 ACMVDLLGRSGRLSEAFEIIQGMQVQPNAGVWGAMLGACRVHKNHELAQLAAEKLYELEP 650
Query: 622 SHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSG 663
+ VLLSNI A+AG+W++A ++R +++ G+ + PG +G
Sbjct: 651 HKTSNYVLLSNITAEAGKWDEAQNMRVFIKERGVHKTPGLAG 692
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 110/412 (26%), Positives = 183/412 (44%), Gaps = 33/412 (8%)
Query: 190 VIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPS 249
V S L L AR LFD M RN VS+N ML+ A+ G + AR LF+ IP
Sbjct: 11 VYRSNQELTRLARSGQLAAARRLFDSMPSRNTVSYNAMLSALARHGRIADARRLFDEIPR 70
Query: 250 KDVVSWGTMIDGYLQVERLSEALTMYRAMLC-DGIAPNDVMIVDLISACGRAMAFGE-GL 307
++ VSW MI R+++A ++ AM DG + ++S RA GE GL
Sbjct: 71 RNTVSWNAMIAACSDHGRVADARDLFDAMPARDGFS-----WTLMVSCYARA---GELGL 122
Query: 308 QIHSIIVKAGFDCYDFIQATIIHFYAACGRINLA-RLQFELGIKDHIASWNALIAGFIRN 366
++ G C A +I YA GR + A L E+ D I SWN+++ G RN
Sbjct: 123 ARDALDRMPGDKCTACYNA-MISGYAKHGRFDDAVALLREMPAPD-IISWNSVLVGLTRN 180
Query: 367 GMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVF 426
G + A + F+ M RD+ SW+ M+ GY + + A LF G+ PN ++ V++
Sbjct: 181 GEMVRAVKFFDEMPARDMVSWNLMLEGYVRAGDVDSAAGLFAGV----PSPNVVSWVTLL 236
Query: 427 CAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTS 486
+G + E R + + + ++ + ++ Y + + A+++F + D+ S
Sbjct: 237 NGYCRAGRIGEARELFDRIPDRNVAAWN----VMLSGYLRLSHMEEAYKLFTEMPDK-NS 291
Query: 487 VSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFK 546
+S W +I L G + + + + G L + ++D F
Sbjct: 292 IS-WTTMISALVRGGKLQEAKDLLDKMPFDSFAAKTALMHGYLQS----KMIDDARLIFD 346
Query: 547 SMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLA 598
++ D + M+ G L++A + + MP K D+V W T++A
Sbjct: 347 GLEV-----RDAVCWNTMISGYVHCGMLDEAMVLFQQMPNK-DMVSWNTMIA 392
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 67/144 (46%), Gaps = 31/144 (21%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
L C+ A+ G+Q HSL+ +SG ++F N+LI+ YAKCG I +A+ +FD D
Sbjct: 457 LSACADLAALHVGRQFHSLLARSGYIGDSFAGNALISAYAKCGRILEARQVFDEMPAPDI 516
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
V+ N +I GY A N EA+ VFR+M
Sbjct: 517 VSWNALIDGY-------------------------------ASNGHGTEAISVFREMEDN 545
Query: 150 GVIPNEVTLASVISSSVHLGGIWE 173
V P+EVT V+S+ H G I E
Sbjct: 546 DVRPDEVTFVGVLSACSHAGLIDE 569
Score = 40.4 bits (93), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 49/111 (44%), Gaps = 11/111 (9%)
Query: 529 LSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKA 588
L+ +G + R F SM S V Y M+ L R G++ DA + +P +
Sbjct: 18 LTRLARSGQLAAARRLFDSMPSRNTVS-----YNAMLSALARHGRIADARRLFDEIPRR- 71
Query: 589 DVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSH-GPSRVLLSNIYADAG 638
+ V W ++AA HG V A+ L P+ G S L+ + YA AG
Sbjct: 72 NTVSWNAMIAACSDHGRVA----DARDLFDAMPARDGFSWTLMVSCYARAG 118
>gi|357508407|ref|XP_003624492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499507|gb|AES80710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1125
Score = 322 bits (824), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 204/684 (29%), Positives = 360/684 (52%), Gaps = 58/684 (8%)
Query: 26 LVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCS 85
LV+ L H+ V I K+G NT+ N L+ + + G ++ A+ +FD
Sbjct: 75 LVTTLTAPKPHLHVDAS------IIKTGFNPNTYRSNFLVKSFLQRGDLNGARKLFDEMP 128
Query: 86 TLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRD 145
+ + N MI GYI++ L++AR +FD + V++T +I G+AQN+ +REA +F +
Sbjct: 129 HKNIFSTNTMIMGYIKSGNLSEARTLFDSMFQRTAVTWTMLIGGYAQNNQFREAFGLFIE 188
Query: 146 MRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSS 205
M G+ P+ V+LA+++S + E R +H VIKL D +++S +LL+ YC S
Sbjct: 189 MGRHGIDPDHVSLATLLSGFTEFDSVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYCKTRS 248
Query: 206 LVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERI------PSK--------- 250
L A LF+++ ER+ V++N +L G++K G A LF ++ P++
Sbjct: 249 LGLAFQLFNDIPERDSVTFNALLTGYSKEGFNREAINLFFKMQEVGYRPTEFTFAAILTA 308
Query: 251 ----DVVSWGTMIDG--------------------YLQVERLSEALTMYRAML-CDGIAP 285
D + +G + G Y + +R+ EA ++ M DGI+
Sbjct: 309 GIQLDDIEFGQQVHGFVVKCNFVWNVFVANALLDFYSKHDRVVEASKLFYEMPEVDGISY 368
Query: 286 NDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLAR-LQ 344
N ++V + GR E L++ + GFD +F AT++ A +++ R +
Sbjct: 369 N--VLVTCYAWNGRV---KESLELFKELQFTGFDRRNFPFATLLSIAAISLNLDIGRQIH 423
Query: 345 FELGIKDHIAS---WNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPN 401
+ + D I+ N+L+ + + G +A ++F+++ + W+AMIS Y Q
Sbjct: 424 SQTIVTDAISEILVGNSLVDMYAKCGEFGEANRIFSDLAIQSSVPWTAMISSYVQKGLHE 483
Query: 402 MALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAII 461
L+LF M A + + T S+ A AS +L G+ H +++ + N +A++
Sbjct: 484 DGLKLFVEMQRAKIGADAATYASIVRACASLASLTLGKQLHSHIIGSGYISNVFSGSALV 543
Query: 462 DMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLN 521
DMYAKCGSI A ++F + R SVS WNA+I A +GD + TL+++ ++ + ++ +
Sbjct: 544 DMYAKCGSIKDALQMFQEMPVRN-SVS-WNALISAYAQNGDGDCTLRLFEEMVRSGLQPD 601
Query: 522 SITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVI 581
S++ + +L C H GLV+ G +YF SM +Y + P +HY +D+L R G+ ++AE+++
Sbjct: 602 SVSLLSILCACSHCGLVEEGLQYFDSMTRIYKLVPKKEHYASTIDMLCRGGRFDEAEKLM 661
Query: 582 RSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQP-SHGPSRVLLSNIYADAGRW 640
MP + D ++W ++L + IH N E+ ++AA L ++ V +SNIYA AG W
Sbjct: 662 AQMPFEPDEIMWSSVLNSCGIHKNQELAKKAANQLFNMKVLRDAAPYVTMSNIYAAAGEW 721
Query: 641 EDAFSIRKEMRDCGMKRLPGFSGV 664
++ ++K MR+ G+K++P +S V
Sbjct: 722 DNVGKVKKAMRERGVKKVPAYSWV 745
>gi|255568474|ref|XP_002525211.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223535508|gb|EEF37177.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 654
Score = 322 bits (824), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 195/632 (30%), Positives = 329/632 (52%), Gaps = 54/632 (8%)
Query: 44 QIHSLIFKS-GLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISG---- 98
QIH L+ + GL+ I L++ + L QAK + N + S
Sbjct: 11 QIHRLLTSAAGLDCG--IYGHLLHHLTELRLPLQAKQLHARLILFSVTPENYLASKLVAL 68
Query: 99 YIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPN-EVT 157
Y + + L AR VFD+ P K SY +M++ ++ ++ +AL++F + ++ N +T
Sbjct: 69 YSKTNHLAFARYVFDQIPHKNTFSYNAMLISYSLHNRHGDALDLFSSLASSNLVNNISIT 128
Query: 158 -----LASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSL 212
L+S S V LG + +HG V++ D V + L+ Y C L
Sbjct: 129 CLLKSLSSFTLSDVKLG-----KEVHGFVLRTGFDADVFVENALITYYSKCYDL------ 177
Query: 213 FDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEAL 272
+L+R++F+R+ +DVVSW +MI GY Q +
Sbjct: 178 -------------------------DLSRKVFDRMTKRDVVSWNSMISGYSQGGLYEDCK 212
Query: 273 TMYRAML-CDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHF 331
T+YR M+ G PN V +V ++ ACG+ G+++H IV + + +I
Sbjct: 213 TLYREMVDFSGFRPNGVTVVSVLQACGQTQDLAFGMEVHKFIVDNQVEIDISVCNALIGL 272
Query: 332 YAACGRINLARLQF-ELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAM 390
YA CG ++ AR F E+ KD + ++ A+I+G + +G ++ + +LF M+ + + +W+A+
Sbjct: 273 YAKCGSLDYARELFDEMSEKDEV-TYGAIISGLMLHGYVDQSLELFRGMKTQILSTWNAV 331
Query: 391 ISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSI 450
I+G QN + L+L M G +PN +T+ SV IA +LK G+ H Y +
Sbjct: 332 ITGLVQNNRHEGVLDLVREMQALGFRPNAVTLSSVLSTIAYFSSLKGGKEIHSYAIKIGY 391
Query: 451 TLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIY 510
N ++ AIIDMYAK G + A VF +DR+ + W AII A+HGDANL L ++
Sbjct: 392 HRNIYVATAIIDMYAKSGYLRGAQRVFDQSKDRSLVI--WTAIISAYAVHGDANLALGLF 449
Query: 511 SDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGR 570
++ K+ I+ + +TF VL+ C H G+VD F+SM Y ++P ++HY C+V LG+
Sbjct: 450 HEMLKQGIQPDPVTFTAVLAACAHCGMVDKAWEIFESMFKKYGIQPLVEHYACVVGALGK 509
Query: 571 AGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLL 630
A +L +A+E + MP++ +WG LL + I +VE+G+ L ++P + + V++
Sbjct: 510 ARRLSEAKEFVSKMPIEPSAKVWGALLHGASISSDVELGKSVCDYLFEIEPENTGNYVIM 569
Query: 631 SNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
+N+Y+ AGRW++A +R+ M G++++PG S
Sbjct: 570 ANLYSQAGRWKEADEVRERMNKVGLQKIPGSS 601
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 126/549 (22%), Positives = 237/549 (43%), Gaps = 104/549 (18%)
Query: 39 VSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISG 98
V G+++H + ++G +++ F++N+LI Y+KC + ++ +FD + D V+ N MISG
Sbjct: 142 VKLGKEVHGFVLRTGFDADVFVENALITYYSKCYDLDLSRKVFDRMTKRDVVSWNSMISG 201
Query: 99 YIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDM-RILGVIPNEVT 157
Y +Q + + ++R+M G PN VT
Sbjct: 202 Y-------------------------------SQGGLYEDCKTLYREMVDFSGFRPNGVT 230
Query: 158 LASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMK 217
+ SV+ + + +H ++ ++ + + L+ +Y C SL AR LFDEM
Sbjct: 231 VVSVLQACGQTQDLAFGMEVHKFIVDNQVEIDISVCNALIGLYAKCGSLDYARELFDEMS 290
Query: 218 ERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRA 277
E++ V++ +++G G V+ + ELF + ++ + +W +I G +Q R L + R
Sbjct: 291 EKDEVTYGAIISGLMLHGYVDQSLELFRGMKTQILSTWNAVITGLVQNNRHEGVLDLVRE 350
Query: 278 MLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGR 337
M G PN V + ++S + G +IHS +K G+ ++ II YA
Sbjct: 351 MQALGFRPNAVTLSSVLSTIAYFSSLKGGKEIHSYAIKIGYHRNIYVATAIIDMYAK--- 407
Query: 338 INLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQN 397
+G++R A+++F+ + R + W+A+IS YA +
Sbjct: 408 -----------------------SGYLRG-----AQRVFDQSKDRSLVIWTAIISAYAVH 439
Query: 398 EQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLS 457
N+AL LFH M+ G++P+ +T +V A
Sbjct: 440 GDANLALGLFHEMLKQGIQPDPVTFTAVLAAC---------------------------- 471
Query: 458 AAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRN 517
A CG ++ A+E+F + + C + G A + + K
Sbjct: 472 -------AHCGMVDKAWEIFESMFKKYGIQPLVEHYACVVGALGKARRLSEAKEFVSKMP 524
Query: 518 IKLNSITFIGVLSTCCHAGLVDLGERYFKSM-KSVYNVEPD-LKHYGCMVDLLGRAGQLE 575
I+ ++ + +L + V+LG KS+ ++ +EP+ +Y M +L +AG+ +
Sbjct: 525 IEPSAKVWGALLHGASISSDVELG----KSVCDYLFEIEPENTGNYVIMANLYSQAGRWK 580
Query: 576 DAEEVIRSM 584
+A+EV M
Sbjct: 581 EADEVRERM 589
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 88/347 (25%), Positives = 159/347 (45%), Gaps = 45/347 (12%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+ +VS L+ C ++ G ++H I + +E + + N+LI LYAKCG + A+ +FD
Sbjct: 229 VTVVSVLQACGQTQDLAFGMEVHKFIVDNQVEIDISVCNALIGLYAKCGSLDYARELFDE 288
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
S D V +ISG + + ++ + E+F + ++ ++I G QN+ L++
Sbjct: 289 MSEKDEVTYGAIISGLMLHGYVDQSLELFRGMKTQILSTWNAVITGLVQNNRHEGVLDLV 348
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
R+M+ LG PN VTL+SV+S+ + + + +H IK+ + ++T +++MY
Sbjct: 349 REMQALGFRPNAVTLSSVLSTIAYFSSLKGGKEIHSYAIKIGYHRNIYVATAIIDMYAKS 408
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYL 263
L A+ +FD+ K+R++V W +++ +A G L
Sbjct: 409 GYLRGAQRVFDQSKDRSLVIWTAIISAYAVHGDANL------------------------ 444
Query: 264 QVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQI-HSIIVKAGFDCYD 322
AL ++ ML GI P+ V +++AC + +I S+ K G
Sbjct: 445 -------ALGLFHEMLKQGIQPDPVTFTAVLAACAHCGMVDKAWEIFESMFKKYG----- 492
Query: 323 FIQATIIHFYAACGRINLARLQFE-------LGIKDHIASWNALIAG 362
IQ + H+ G + AR E + I+ W AL+ G
Sbjct: 493 -IQPLVEHYACVVGALGKARRLSEAKEFVSKMPIEPSAKVWGALLHG 538
>gi|242085334|ref|XP_002443092.1| hypothetical protein SORBIDRAFT_08g008260 [Sorghum bicolor]
gi|241943785|gb|EES16930.1| hypothetical protein SORBIDRAFT_08g008260 [Sorghum bicolor]
Length = 655
Score = 322 bits (824), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 172/449 (38%), Positives = 269/449 (59%), Gaps = 6/449 (1%)
Query: 219 RNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMY-RA 277
++++ N +++ +A + + AR+LF+ + +DVVSW T++DGY + EA ++ R
Sbjct: 164 QSVLVGNALVHMYASSMSLPDARKLFDEMADRDVVSWTTLVDGYARGGLPDEAWRVFCRM 223
Query: 278 MLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGR 337
++ G PN+V +V SA G+ G G +H +V++G ++ ++ + CG
Sbjct: 224 VVAGGGWPNEVTLVAAASAAGQIGLLGLGRMVHQCVVESGVRMSVNLENALVDMFGKCGC 283
Query: 338 INLARLQFE-LGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQ 396
+ A+ F+ + IKD + SW ++++ + + G +E+A +LF + R+ SWS M++ Y+Q
Sbjct: 284 VASAKEIFDGMPIKD-VYSWTSMVSAYAKCGDLENAGKLFKEIPNRNAVSWSCMVAAYSQ 342
Query: 397 NEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHE-YVLNNSITLNDN 455
P A+ +F+ M+ AGV+P + T+VSV A A G L GR ++ Y++++ + L N
Sbjct: 343 ANLPEEAMRIFNDMIAAGVEPIDATLVSVLSACAQLGCLDVGRCLYDAYIVSHKVELTVN 402
Query: 456 LSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEK 515
LS A IDM+AKCG + A +F ++ D+ +V WN +I A+HG + L ++ +
Sbjct: 403 LSNAFIDMFAKCGDVGAASRLFRNMEDK--NVVSWNTMIVAHALHGQSEEALHLFQKFKA 460
Query: 516 RNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLE 575
I + IT+IGVLS C H+GLV G +FK MK VY +EP +HY CM+DLLG+ G LE
Sbjct: 461 IGIFPDEITYIGVLSACSHSGLVSEGRYHFKEMKIVYGIEPRAEHYACMIDLLGKVGLLE 520
Query: 576 DAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYA 635
+A EV RSMP+ AD WG LL A R+HGNVE+G+ AA L GL PS VL+S IYA
Sbjct: 521 EAFEVARSMPVGADEAGWGALLNACRMHGNVEIGKCAADKLVGLDPSDSGIYVLMSQIYA 580
Query: 636 DAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
+W IR MRD G+K+ PG S +
Sbjct: 581 SKSKWGQVKMIRTVMRDRGVKKNPGCSSI 609
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 134/479 (27%), Positives = 224/479 (46%), Gaps = 73/479 (15%)
Query: 34 SAHIAVSQGQQIHSLIFKSG-LESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVAC 92
+A + S + IH + FK G + + + N+L+++YA SM
Sbjct: 141 AATTSSSPAEAIHCVAFKRGFIGQSVLVGNALVHMYAS--------SM------------ 180
Query: 93 NIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGV- 151
L DAR++FD+ + VS+T+++ G+A+ EA VF M + G
Sbjct: 181 -----------SLPDARKLFDEMADRDVVSWTTLVDGYARGGLPDEAWRVFCRMVVAGGG 229
Query: 152 IPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARS 211
PNEVTL + S++ +G + RM+H V++ + V + L++M+ C + A+
Sbjct: 230 WPNEVTLVAAASAAGQIGLLGLGRMVHQCVVESGVRMSVNLENALVDMFGKCGCVASAKE 289
Query: 212 LFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEA 271
+FD M +++ SW M++ +AK G +E A +LF+ IP+++ VSW M+ Y Q EA
Sbjct: 290 IFDGMPIKDVYSWTSMVSAYAKCGDLENAGKLFKEIPNRNAVSWSCMVAAYSQANLPEEA 349
Query: 272 LTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHF 331
+ ++ M+ G+ P D +V ++SAC + G + +D Y +
Sbjct: 350 MRIFNDMIAAGVEPIDATLVSVLSACAQLGCLDVG--------RCLYDAYIVSHKVEL-- 399
Query: 332 YAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMI 391
+NL+ NA I F + G + A +LF NM+ ++V SW+ MI
Sbjct: 400 -----TVNLS---------------NAFIDMFAKCGDVGAASRLFRNMEDKNVVSWNTMI 439
Query: 392 SGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWA-HEYVLNNSI 450
+A + Q AL LF G+ P+EIT + V A + SG + EGR+ E + I
Sbjct: 440 VAHALHGQSEEALHLFQKFKAIGIFPDEITYIGVLSACSHSGLVSEGRYHFKEMKIVYGI 499
Query: 451 TLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSV----SPWNAIICGLAMHGDANL 505
A +ID+ K G + AFEV R+ V + W A++ MHG+ +
Sbjct: 500 EPRAEHYACMIDLLGKVGLLEEAFEV-----ARSMPVGADEAGWGALLNACRMHGNVEI 553
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 102/415 (24%), Positives = 185/415 (44%), Gaps = 63/415 (15%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E+ LV+A + G+ +H + +SG+ + ++N+L++++ KCG ++ AK +FD
Sbjct: 233 EVTLVAAASAAGQIGLLGLGRMVHQCVVESGVRMSVNLENALVDMFGKCGCVASAKEIFD 292
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
D + M+S Y + L +A ++F + P + VS++ M+ ++Q + EA+ +
Sbjct: 293 GMPIKDVYSWTSMVSAYAKCGDLENAGKLFKEIPNRNAVSWSCMVAAYSQANLPEEAMRI 352
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLH-GLVIKLMIDGFVIISTNLLNMYC 201
F DM GV P + TL SV+S+ LG + R L+ ++ ++ V +S ++M+
Sbjct: 353 FNDMIAAGVEPIDATLVSVLSACAQLGCLDVGRCLYDAYIVSHKVELTVNLSNAFIDMFA 412
Query: 202 VCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDG 261
C + A LF M+++N+VSWN M+ A G E A LF++
Sbjct: 413 KCGDVGAASRLFRNMEDKNVVSWNTMIVAHALHGQSEEALHLFQK--------------- 457
Query: 262 YLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCY 321
++A+ GI P+++ + ++SAC HS +V G Y
Sbjct: 458 -------------FKAI---GIFPDEITYIGVLSACS-----------HSGLVSEGR--Y 488
Query: 322 DFIQATIIHF------YAAC-----GRINLARLQFELG----IKDHIASWNALIAGFIRN 366
F + I++ + AC G++ L FE+ + A W AL+ +
Sbjct: 489 HFKEMKIVYGIEPRAEHYACMIDLLGKVGLLEEAFEVARSMPVGADEAGWGALLNACRMH 548
Query: 367 GMIEDARQLFNN---MQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPN 418
G +E + + + D + M YA + + M D GVK N
Sbjct: 549 GNVEIGKCAADKLVGLDPSDSGIYVLMSQIYASKSKWGQVKMIRTVMRDRGVKKN 603
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 96/381 (25%), Positives = 170/381 (44%), Gaps = 63/381 (16%)
Query: 257 TMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKA 316
TM+ G+L+ + + AL ++R +L D + + IV + A + + E IH + K
Sbjct: 102 TMMRGFLRAGKPAHALALFRRVLRDRLPADARTIVFAVKAATTSSSPAEA--IHCVAFKR 159
Query: 317 GFDCYD-FIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQL 375
GF + ++H YA+ + AR F+ + SW L+ G+ R G+ ++A ++
Sbjct: 160 GFIGQSVLVGNALVHMYASSMSLPDARKLFDEMADRDVVSWTTLVDGYARGGLPDEAWRV 219
Query: 376 FNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTL 435
F M +V G PNE+T+V+ A G L
Sbjct: 220 FCRM------------------------------VVAGGGWPNEVTLVAAASAAGQIGLL 249
Query: 436 KEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVF--YHIRDR---TTSVSPW 490
GR H+ V+ + + ++ NL A++DM+ KCG + +A E+F I+D T+ VS +
Sbjct: 250 GLGRMVHQCVVESGVRMSVNLENALVDMFGKCGCVASAKEIFDGMPIKDVYSWTSMVSAY 309
Query: 491 -------------------NAI--ICGLAMHGDANL---TLKIYSDLEKRNIKLNSITFI 526
NA+ C +A + ANL ++I++D+ ++ T +
Sbjct: 310 AKCGDLENAGKLFKEIPNRNAVSWSCMVAAYSQANLPEEAMRIFNDMIAAGVEPIDATLV 369
Query: 527 GVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPM 586
VLS C G +D+G + + + VE + +D+ + G + A + R+M
Sbjct: 370 SVLSACAQLGCLDVGRCLYDAYIVSHKVELTVNLSNAFIDMFAKCGDVGAASRLFRNMED 429
Query: 587 KADVVIWGTLLAASRIHGNVE 607
K +VV W T++ A +HG E
Sbjct: 430 K-NVVSWNTMIVAHALHGQSE 449
>gi|356522522|ref|XP_003529895.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
mitochondrial-like [Glycine max]
Length = 911
Score = 322 bits (824), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 193/675 (28%), Positives = 342/675 (50%), Gaps = 76/675 (11%)
Query: 25 ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSC 84
AL L+ C A + + G ++H+ + K G + + + +LINLY KC I
Sbjct: 133 ALTVVLKICLALMELWLGMEVHACLLKRGFQVDVHLSCALINLYEKCLGI---------- 182
Query: 85 STLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFR 144
DR N +VFD+TP++ + +++M +++ W +ALE+ R
Sbjct: 183 ------------------DRAN---QVFDETPLQEDFLWNTIVMANLRSERWEDALELSR 221
Query: 145 DMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCS 204
M+ + T+ ++ + L + E + +HG VI+ I ++++MY +
Sbjct: 222 RMQSASAKATDGTIVKLLQACGKLRALNEGKQIHGYVIRFGRVSNTSICNSIVSMYSRNN 281
Query: 205 SLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSK----DVVSWGTMID 260
L AR++FD ++ N+ SWN +++ +A G + A +LF + S D+++W +++
Sbjct: 282 RLELARAVFDSTEDHNLASWNSIISSYAVNGCLNGAWDLFREMESSSIKPDIITWNSLLS 341
Query: 261 GYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDC 320
G+L LT R++ G P+ I + A F G +IH I+++ +
Sbjct: 342 GHLLQGSYENVLTNIRSLQSAGFKPDSCSITSALQAVIELGYFNLGKEIHGYIMRSKLEY 401
Query: 321 YDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ 380
++ +++ Y + A + F +I +WN+LI+G+ G+ ++A +L M+
Sbjct: 402 DVYVCTSLVDMYIKNDCLEKAEVVFHHTKNKNICAWNSLISGYTYKGLFDNAEKLLIQMK 461
Query: 381 KR---------------------------------------DVYSWSAMISGYAQNEQPN 401
+ +V SW+AMISG QNE
Sbjct: 462 EEGIKADLVTWNSLVSGYSMSGCSEEALAVINRIKSLGLTPNVVSWTAMISGCCQNENYT 521
Query: 402 MALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAII 461
AL+ F M + VKPN T+ ++ A A LK+G H + + + + ++ A+I
Sbjct: 522 DALQFFSQMQEENVKPNSTTISTLLRACAGPSLLKKGEEIHCFSMKHGFVDDIYIATALI 581
Query: 462 DMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLN 521
DMY+K G + A EVF +I+++T + WN ++ G A++G ++ ++ K I+ +
Sbjct: 582 DMYSKGGKLKVAHEVFRNIKEKT--LPCWNCMMMGYAIYGHGEEVFTLFDNMCKTGIRPD 639
Query: 522 SITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVI 581
+ITF +LS C ++GLV G +YF SMK+ Y++ P ++HY CMVDLLG+AG L++A + I
Sbjct: 640 AITFTALLSGCKNSGLVMDGWKYFDSMKTDYSINPTIEHYSCMVDLLGKAGFLDEALDFI 699
Query: 582 RSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWE 641
+MP KAD IWG +LAA R+H ++++ E AA++L L+P + + VL+ NIY+ RW
Sbjct: 700 HAMPQKADASIWGAVLAACRLHKDIKIAEIAARNLFRLEPYNSANYVLMMNIYSTFERWG 759
Query: 642 DAFSIRKEMRDCGMK 656
D +++ M G+K
Sbjct: 760 DVERLKESMTAMGVK 774
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 113/469 (24%), Positives = 207/469 (44%), Gaps = 41/469 (8%)
Query: 138 EALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLL 197
E LEVF+++ GV + L V+ + L +W +H ++K V +S L+
Sbjct: 114 EILEVFKELHDKGVKFDSKALTVVLKICLALMELWLGMEVHACLLKRGFQVDVHLSCALI 173
Query: 198 NMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGT 257
N+Y C + A +FDE P ++ W T
Sbjct: 174 NLYEKCLGIDRANQVFDE-------------------------------TPLQEDFLWNT 202
Query: 258 MIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAG 317
++ L+ ER +AL + R M D IV L+ ACG+ A EG QIH +++ G
Sbjct: 203 IVMANLRSERWEDALELSRRMQSASAKATDGTIVKLLQACGKLRALNEGKQIHGYVIRFG 262
Query: 318 FDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFN 377
I +I+ Y+ R+ LAR F+ ++ASWN++I+ + NG + A LF
Sbjct: 263 RVSNTSICNSIVSMYSRNNRLELARAVFDSTEDHNLASWNSIISSYAVNGCLNGAWDLFR 322
Query: 378 NMQ----KRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSG 433
M+ K D+ +W++++SG+ L + AG KP+ ++ S A+ G
Sbjct: 323 EMESSSIKPDIITWNSLLSGHLLQGSYENVLTNIRSLQSAGFKPDSCSITSALQAVIELG 382
Query: 434 TLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAI 493
G+ H Y++ + + + + +++DMY K + A VF+H +++ ++ WN++
Sbjct: 383 YFNLGKEIHGYIMRSKLEYDVYVCTSLVDMYIKNDCLEKAEVVFHHTKNK--NICAWNSL 440
Query: 494 ICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYN 553
I G G + K+ +++ IK + +T+ ++S +G + +KS+
Sbjct: 441 ISGYTYKGLFDNAEKLLIQMKEEGIKADLVTWNSLVSGYSMSGCSEEALAVINRIKSL-G 499
Query: 554 VEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMP---MKADVVIWGTLLAA 599
+ P++ + M+ + DA + M +K + TLL A
Sbjct: 500 LTPNVVSWTAMISGCCQNENYTDALQFFSQMQEENVKPNSTTISTLLRA 548
>gi|297822535|ref|XP_002879150.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324989|gb|EFH55409.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 872
Score = 322 bits (824), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 199/627 (31%), Positives = 320/627 (51%), Gaps = 107/627 (17%)
Query: 41 QGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYI 100
+G Q+H+++ K+GL+ + NSLINLY KCG + +A
Sbjct: 216 RGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKA----------------------- 252
Query: 101 RNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLAS 160
R +FDKT +K V++ SMI G+A N EAL +F MR+ V +E + AS
Sbjct: 253 --------RILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNHVRLSESSFAS 304
Query: 161 VISSSVHLGGIWECRMLHGLVIKLMIDGFVI---ISTNLLNMYCVCSSLVEARSLFDEMK 217
+I +L + LH V+K GFV I T L+ Y C ++++A LF E
Sbjct: 305 IIKLCANLKELRFTEQLHCSVVKY---GFVFDQNIRTALMVAYSKCMAMLDALRLFKE-- 359
Query: 218 ERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRA 277
GF +VVSW MI G+LQ + EA+ ++
Sbjct: 360 -----------TGFLG-----------------NVVSWTAMISGFLQNDGKEEAVGLFSE 391
Query: 278 MLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGR 337
M G+ PN+ +++A + ++H+ +VK ++ +
Sbjct: 392 MKRKGVRPNEFTYSVILTA----LPVISPSEVHAQVVKTNYERSSTVG------------ 435
Query: 338 INLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQN 397
AL+ +++ G +++A ++F+ + +D+ +WSAM++GYAQ
Sbjct: 436 -------------------TALLDAYVKLGKVDEAAKVFSGIDNKDIVAWSAMLAGYAQA 476
Query: 398 EQPNMALELFHGMVDAGVKPNEITMVSVF--CAIASSGTLKEGRWAHEYVLNNSITLNDN 455
+ A+++F + GVKPNE T S+ CA A++ ++ +G+ H + + + + +
Sbjct: 477 GETEAAIKIFSELTKGGVKPNEFTFSSILNVCA-ATTASMGQGKQFHGFAIKSRLDSSLC 535
Query: 456 LSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEK 515
+S+A++ MYAK G I +A EVF R R + WN++I G A HG A L ++ +++K
Sbjct: 536 VSSALLTMYAKKGHIESAEEVFK--RQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKK 593
Query: 516 RNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLE 575
R +K++S+TFIGV + C HAGLV+ GE+YF M + P +H CMVDL RAGQLE
Sbjct: 594 RKVKMDSVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLE 653
Query: 576 DAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYA 635
A +VI +MP A IW T+LAA R+H E+G AA+ + + P + VLLSN+YA
Sbjct: 654 KAMKVIDNMPNLAGSTIWRTILAACRVHKKTELGRLAAEKIIAMIPEDSAAYVLLSNMYA 713
Query: 636 DAGRWEDAFSIRKEMRDCGMKRLPGFS 662
++G W++ +RK M + +K+ PG+S
Sbjct: 714 ESGDWQERAKVRKLMNERNVKKEPGYS 740
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 123/528 (23%), Positives = 233/528 (44%), Gaps = 71/528 (13%)
Query: 98 GYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVT 157
G + RL A +FDK+P + SYTS++ GF+++ +EA +F +++ LG+ +
Sbjct: 40 GAASSSRLYYAHNLFDKSPDRDRESYTSLLFGFSRDGRTQEATRLFLNIQHLGMEMDCSI 99
Query: 158 LASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMK 217
+SV+ S L R LH IK V + T+L++ Y S+ + R++FDEMK
Sbjct: 100 FSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRNVFDEMK 159
Query: 218 ERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRA 277
ERN+V+W +++G+A+ L E E LT++
Sbjct: 160 ERNVVTWTTLISGYARNSLNE-------------------------------EVLTLFMR 188
Query: 278 MLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGR 337
M +G PN + G GLQ+H+++VK G D + ++I+ Y CG
Sbjct: 189 MQDEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGN 248
Query: 338 INLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQN 397
+ AR+ F+ + +WN++I+G+ NG+ +
Sbjct: 249 VRKARILFDKTEVKSVVTWNSMISGYAANGLDLE-------------------------- 282
Query: 398 EQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLS 457
AL +F+ M V+ +E + S+ A+ L+ H V+ + N+
Sbjct: 283 -----ALGMFYSMRLNHVRLSESSFASIIKLCANLKELRFTEQLHCSVVKYGFVFDQNIR 337
Query: 458 AAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRN 517
A++ Y+KC ++ A +F VS W A+I G + + ++S+++++
Sbjct: 338 TALMVAYSKCMAMLDALRLFKETGFLGNVVS-WTAMISGFLQNDGKEEAVGLFSEMKRKG 396
Query: 518 IKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDA 577
++ N T+ +L+ ++ E + + +K+ Y + ++D + G++++A
Sbjct: 397 VRPNEFTYSVILTAL---PVISPSEVHAQVVKTNYERSSTVG--TALLDAYVKLGKVDEA 451
Query: 578 EEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSL--AGLQPSH 623
+V + K D+V W +LA G E + L G++P+
Sbjct: 452 AKVFSGIDNK-DIVAWSAMLAGYAQAGETEAAIKIFSELTKGGVKPNE 498
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 97/411 (23%), Positives = 179/411 (43%), Gaps = 67/411 (16%)
Query: 37 IAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMI 96
+ V ++H+ + K+ E ++ + +L++ Y K G + +A +F D VA + M+
Sbjct: 411 LPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVDEAAKVFSGIDNKDIVAWSAML 470
Query: 97 SGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEV 156
+GY AQ A+++F ++ GV PNE
Sbjct: 471 AGY-------------------------------AQAGETEAAIKIFSELTKGGVKPNEF 499
Query: 157 TLASVIS-SSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDE 215
T +S+++ + + + + HG IK +D + +S+ LL MY + A +F
Sbjct: 500 TFSSILNVCAATTASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGHIESAEEVFKR 559
Query: 216 MKERNIVSWNVMLNGFAKAGLVELARELFERIPSK----DVVSWGTMIDGYLQVERLSEA 271
+E+++VSWN M++G+A+ G A ++F+ + + D V++ + + E
Sbjct: 560 QREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDSVTFIGVFAACTHAGLVEEG 619
Query: 272 LTMYRAMLCD-GIAP---NDVMIVDLISACG---RAMAFGEGLQIHSIIVKAGFDCYDFI 324
+ M+ D IAP ++ +VDL S G +AM I ++ AG + I
Sbjct: 620 EKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKV-----IDNMPNLAGSTIWRTI 674
Query: 325 QATI-IHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIED---ARQLFN--N 378
A +H GR LA + I + A++ L + +G ++ R+L N N
Sbjct: 675 LAACRVHKKTELGR--LAAEKIIAMIPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERN 732
Query: 379 MQKRDVYSW-------SAMISG---YAQNEQPNMALE-LFHGMVDAGVKPN 418
++K YSW A ++G + +Q M LE L + D G +P+
Sbjct: 733 VKKEPGYSWIEVKNKTYAFLAGDRSHPLKDQIYMKLEDLSTRLKDLGYEPD 783
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 96/230 (41%), Gaps = 38/230 (16%)
Query: 23 ELALVSALRYCSAHIA-VSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMF 81
E S L C+A A + QG+Q H KS L+S+ + ++L+ +YAK G I A+ +F
Sbjct: 498 EFTFSSILNVCAATTASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGHIESAEEVF 557
Query: 82 DSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALE 141
D V+ N MISGY AQ+ +AL+
Sbjct: 558 KRQREKDLVSWNSMISGY-------------------------------AQHGQAMKALD 586
Query: 142 VFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIK-LMIDGFVIISTNLLNMY 200
VF++M+ V + VT V ++ H G + E ++++ I ++ ++++Y
Sbjct: 587 VFKEMKKRKVKMDSVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLY 646
Query: 201 CVCSSLVEARSLFDEMKERNIVS---WNVMLNGFAKAGLVELARELFERI 247
L +A + D M N+ W +L EL R E+I
Sbjct: 647 SRAGQLEKAMKVIDNMP--NLAGSTIWRTILAACRVHKKTELGRLAAEKI 694
>gi|225456517|ref|XP_002281018.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 624
Score = 322 bits (824), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 193/582 (33%), Positives = 304/582 (52%), Gaps = 69/582 (11%)
Query: 88 DPVACNIMISGYIRNDR-LNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDM 146
DPV + ++ + +D +R +F + S+ M ++++ E + ++ M
Sbjct: 59 DPVVSSKLLYYSLSHDHDFAFSRTLFFQIHKPNVFSWNFMFRAYSRSSFPAETIALYNLM 118
Query: 147 RILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSL 206
G +P+ + V+ + L + + R +H +KL + V +
Sbjct: 119 LRNGTLPDNYSFPFVLKACARLSLLHKGREIHSSTLKLGVHLDVFVQ------------- 165
Query: 207 VEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPS--KDVVSWGTMIDGYLQ 264
N +++ F+ G VE AR +F+ +P+ +DVVSW +MI GYLQ
Sbjct: 166 ------------------NALISAFSSCGAVEAARAVFDMLPALVRDVVSWNSMISGYLQ 207
Query: 265 VERLSEALTMYRAMLCDG-IAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDF 323
R AL ++ +L DG ++P++V +V +S CGR G +IH + +GF F
Sbjct: 208 SHRYELALKVFWELLGDGSLSPDEVTLVSALSVCGRLGLLDLGKKIHGLFTGSGFVLDVF 267
Query: 324 IQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRD 383
+ +++I Y+ CG+I AR F+ + W ++IAG+ ++ + ++A +LF MQ
Sbjct: 268 VGSSLIDMYSKCGQIEDARKVFDRIPHRNTVCWTSMIAGYAQSDLFKEAIELFREMQ--- 324
Query: 384 VYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHE 443
I G+A DA T+ V A G L +GRW H
Sbjct: 325 -------IGGFA---------------ADAA------TIACVLSACGHWGALAQGRWIHL 356
Query: 444 YVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDA 503
Y NSI ++ N A+I MY+KCG I A E+F+ + + W+A+I GLAM+G++
Sbjct: 357 YCERNSIEMDLNARNALIGMYSKCGDIQKALEIFHGLTQ--PDIFSWSAVISGLAMNGES 414
Query: 504 NLTLKIYSDLEK-RNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYG 562
+ L ++S +E +I+ N ITF+GVL C H G VD G YF +M +YN+ P ++HYG
Sbjct: 415 DKALHLFSQMEMISDIRPNEITFLGVLCACNHGGFVDKGLYYFNAMTQIYNLTPGIEHYG 474
Query: 563 CMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPS 622
CMVDLLGRA L +AE+ IR++P++ DVVIW +LL A R HGN+E+ E AAK + L+P
Sbjct: 475 CMVDLLGRANLLVEAEKFIRTLPIQPDVVIWRSLLFACRNHGNIELAEFAAKQIEELEPR 534
Query: 623 HGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
+RVLLSN+YA A RW D +RK+M +K+ PG S V
Sbjct: 535 RCGARVLLSNVYASASRWGDVKRVRKDMATQRIKKQPGCSFV 576
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 134/512 (26%), Positives = 213/512 (41%), Gaps = 120/512 (23%)
Query: 21 DYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSM 80
+Y V L+ C+ + +G++IHS K G+ + F+QN+LI+ ++ CG + A
Sbjct: 127 NYSFPFV--LKACARLSLLHKGREIHSSTLKLGVHLDVFVQNALISAFSSCGAVEAA--- 181
Query: 81 FDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTP--IKCCVSYTSMIMGFAQNDCWRE 138
R VFD P ++ VS+ SMI G+ Q+ +
Sbjct: 182 ----------------------------RAVFDMLPALVRDVVSWNSMISGYLQSHRYEL 213
Query: 139 ALEVFRDMRILGVI-PNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVI---IST 194
AL+VF ++ G + P+EVTL S +S LG + + +HGL GFV+ + +
Sbjct: 214 ALKVFWELLGDGSLSPDEVTLVSALSVCGRLGLLDLGKKIHGLFTG---SGFVLDVFVGS 270
Query: 195 NLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVS 254
+L++MY C + +AR +FD + RN V W M+ G+A++ L +
Sbjct: 271 SLIDMYSKCGQIEDARKVFDRIPHRNTVCWTSMIAGYAQSDLFK---------------- 314
Query: 255 WGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIV 314
EA+ ++R M G A + I ++SACG A +G IH
Sbjct: 315 ---------------EAIELFREMQIGGFAADAATIACVLSACGHWGALAQGRWIHLYCE 359
Query: 315 KAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQ 374
+ + + +I Y+ CG I A F + I SW+A+I+G NG + A
Sbjct: 360 RNSIEMDLNARNALIGMYSKCGDIQKALEIFHGLTQPDIFSWSAVISGLAMNGESDKALH 419
Query: 375 LFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGT 434
LF+ M+ MIS ++PNEIT + V CA G
Sbjct: 420 LFSQME---------MIS---------------------DIRPNEITFLGVLCACNHGGF 449
Query: 435 LKEGRWAHEYVLNNSITLNDNLSAAIID---MYAKCGSINTAFEVFYHIRDRTTSVSP-- 489
+ +G + N++T NL+ I M G N E I RT + P
Sbjct: 450 VDKGLYYF-----NAMTQIYNLTPGIEHYGCMVDLLGRANLLVEAEKFI--RTLPIQPDV 502
Query: 490 --WNAIICGLAMHGD---ANLTLKIYSDLEKR 516
W +++ HG+ A K +LE R
Sbjct: 503 VIWRSLLFACRNHGNIELAEFAAKQIEELEPR 534
>gi|147854977|emb|CAN80267.1| hypothetical protein VITISV_027683 [Vitis vinifera]
Length = 539
Score = 322 bits (824), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 156/393 (39%), Positives = 235/393 (59%), Gaps = 3/393 (0%)
Query: 272 LTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHF 331
L+M R G PN V + ACG + EG QI +K G + F+ +I
Sbjct: 20 LSMVRV---SGFLPNRYTFVFVFKACGNGLGVLEGEQIRVHAIKIGLESNLFVTNAMIRM 76
Query: 332 YAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMI 391
YA G ++ AR F+ + + SWN +I G++ +G I A+++F+ M +RDV SW+ +I
Sbjct: 77 YANWGLVDEARRVFDWSLDQDLYSWNIMIGGYVGSGEIGRAKEMFDEMSERDVVSWTTII 136
Query: 392 SGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSIT 451
+GY Q AL+LFH M+ G PNE T+ S A A+ L +GRW H Y+ + I
Sbjct: 137 AGYVQVGCFKEALDLFHEMLQTGPPPNEFTLASALAACANLVALDQGRWIHVYIDKSEIK 196
Query: 452 LNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYS 511
+N+ L A+++DMYAKCG I+ A +VF+ V PWNA+I G AMHG + + ++
Sbjct: 197 MNERLLASLLDMYAKCGEIDFAAKVFHDEYGLKLKVWPWNAMIGGYAMHGKSKEAIDLFE 256
Query: 512 DLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRA 571
++ + N +TF+ +L+ C H LV+ G YFKSM S Y +EP+++HYGCMVDLLGR+
Sbjct: 257 QMKVEKVSPNKVTFVALLNACSHGKLVEEGRGYFKSMASSYGIEPEIEHYGCMVDLLGRS 316
Query: 572 GQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLS 631
G L++AEE + +MPM D IWG LL A RIH ++E G+R K + L H VLL+
Sbjct: 317 GLLKEAEETVFNMPMAPDATIWGALLGACRIHKDIERGQRIGKIIKELDSDHIGCHVLLA 376
Query: 632 NIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
N+Y+ +G+W++A ++R+++ G K+ PG S +
Sbjct: 377 NLYSASGQWDEAKAVRQKIEVSGRKKTPGCSSI 409
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 94/369 (25%), Positives = 176/369 (47%), Gaps = 38/369 (10%)
Query: 139 ALEVFRDM-RILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLL 197
++ +F M R+ G +PN T V + + G+ E + IK+ ++ + ++ ++
Sbjct: 15 SMRIFLSMVRVSGFLPNRYTFVFVFKACGNGLGVLEGEQIRVHAIKIGLESNLFVTNAMI 74
Query: 198 NMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGT 257
MY + EAR +FD ++++ SWN+M+ G+ +G + A+E+F+ + +DVVSW T
Sbjct: 75 RMYANWGLVDEARRVFDWSLDQDLYSWNIMIGGYVGSGEIGRAKEMFDEMSERDVVSWTT 134
Query: 258 MIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAG 317
+I GY+QV EAL ++ ML G PN+ + ++AC +A +G IH I K+
Sbjct: 135 IIAGYVQVGCFKEALDLFHEMLQTGPPPNEFTLASALAACANLVALDQGRWIHVYIDKSE 194
Query: 318 FDCYDFIQATIIHFYAACGRINLARLQF--ELGIKDHIASWNALIAGFIRNGMIEDARQL 375
+ + A+++ YA CG I+ A F E G+K + WNA+I G+ +G ++A L
Sbjct: 195 IKMNERLLASLLDMYAKCGEIDFAAKVFHDEYGLKLKVWPWNAMIGGYAMHGKSKEAIDL 254
Query: 376 FNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTL 435
F M+ V PN++T V++ A + +
Sbjct: 255 FEQMKVEK-------------------------------VSPNKVTFVALLNACSHGKLV 283
Query: 436 KEGRWAHEYVLNNSITLNDNLS--AAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAI 493
+EGR + + +S + + ++D+ + G + A E +++ + W A+
Sbjct: 284 EEGR-GYFKSMASSYGIEPEIEHYGCMVDLLGRSGLLKEAEETVFNM-PMAPDATIWGAL 341
Query: 494 ICGLAMHGD 502
+ +H D
Sbjct: 342 LGACRIHKD 350
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 102/370 (27%), Positives = 173/370 (46%), Gaps = 64/370 (17%)
Query: 25 ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSC 84
V + C + V +G+QI K GLESN F+ N++I +YA GL+ +A+ +FD
Sbjct: 34 TFVFVFKACGNGLGVLEGEQIRVHAIKIGLESNLFVTNAMIRMYANWGLVDEARRVFDWS 93
Query: 85 STLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFR 144
D + NIMI GY+ + + A+E+FD+ + VS+T++I G+ Q C++EAL++F
Sbjct: 94 LDQDLYSWNIMIGGYVGSGEIGRAKEMFDEMSERDVVSWTTIIAGYVQVGCFKEALDLFH 153
Query: 145 DMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCS 204
+M G PNE TLAS +++ +L + + R +H + K I + +LL+MY C
Sbjct: 154 EMLQTGPPPNEFTLASALAACANLVALDQGRWIHVYIDKSEIKMNERLLASLLDMYAKCG 213
Query: 205 SLVEARSLF-DEMKER-NIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
+ A +F DE + + WN M+ G+A G + A +LFE+
Sbjct: 214 EIDFAAKVFHDEYGLKLKVWPWNAMIGGYAMHGKSKEAIDLFEQ---------------- 257
Query: 263 LQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD 322
++VE++S PN V V L++AC H +V+
Sbjct: 258 MKVEKVS---------------PNKVTFVALLNACS-----------HGKLVEE------ 285
Query: 323 FIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQ-LFNNMQK 381
GR + GI+ I + ++ R+G++++A + +FN
Sbjct: 286 -------------GRGYFKSMASSYGIEPEIEHYGCMVDLLGRSGLLKEAEETVFNMPMA 332
Query: 382 RDVYSWSAMI 391
D W A++
Sbjct: 333 PDATIWGALL 342
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 128/307 (41%), Gaps = 81/307 (26%)
Query: 3 LDHFHSVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQN 62
LD FH + Q N E L SAL C+ +A+ QG+ IH I KS ++ N +
Sbjct: 149 LDLFHEML--QTGPPPN---EFTLASALAACANLVALDQGRWIHVYIDKSEIKMNERLLA 203
Query: 63 SLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCV- 121
SL+++YAKCG I A +F D+ +K V
Sbjct: 204 SLLDMYAKCGEIDFAAKVFH------------------------------DEYGLKLKVW 233
Query: 122 SYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLV 181
+ +MI G+A + +EA+++F M++ V PN+VT +++++ C HG +
Sbjct: 234 PWNAMIGGYAMHGKSKEAIDLFEQMKVEKVSPNKVTFVALLNA---------CS--HGKL 282
Query: 182 IKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMK-----ERNIVSWNVMLNGFAKAGL 236
++ E R F M E I + M++ ++GL
Sbjct: 283 VE------------------------EGRGYFKSMASSYGIEPEIEHYGCMVDLLGRSGL 318
Query: 237 VELARELFERIP-SKDVVSWGTMIDG---YLQVERLSEALTMYRAMLCDGIAPNDVMIVD 292
++ A E +P + D WG ++ + +ER + + + D I + V++ +
Sbjct: 319 LKEAEETVFNMPMAPDATIWGALLGACRIHKDIERGQRIGKIIKELDSDHIGCH-VLLAN 377
Query: 293 LISACGR 299
L SA G+
Sbjct: 378 LYSASGQ 384
Score = 43.9 bits (102), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 63/139 (45%), Gaps = 3/139 (2%)
Query: 403 ALELFHGMVD-AGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAII 461
++ +F MV +G PN T V VF A + + EG + + + N ++ A+I
Sbjct: 15 SMRIFLSMVRVSGFLPNRYTFVFVFKACGNGLGVLEGEQIRVHAIKIGLESNLFVTNAMI 74
Query: 462 DMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLN 521
MYA G ++ A VF D+ + WN +I G G+ +++ ++ +R++
Sbjct: 75 RMYANWGLVDEARRVFDWSLDQ--DLYSWNIMIGGYVGSGEIGRAKEMFDEMSERDVVSW 132
Query: 522 SITFIGVLSTCCHAGLVDL 540
+ G + C +DL
Sbjct: 133 TTIIAGYVQVGCFKEALDL 151
>gi|225454494|ref|XP_002276948.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
mitochondrial-like [Vitis vinifera]
Length = 913
Score = 321 bits (823), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 192/671 (28%), Positives = 336/671 (50%), Gaps = 76/671 (11%)
Query: 29 ALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLD 88
AL+ C+ + + G +IH + K G + + +++ +L+N Y +C
Sbjct: 139 ALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCW---------------- 182
Query: 89 PVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRI 148
L A +VF + P + + I+ Q++ ++ +E+FR M+
Sbjct: 183 ---------------GLEKANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQF 227
Query: 149 LGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVE 208
+ T+ V+ + +G + + +HG V + +D V + L++MY L
Sbjct: 228 SFLKAETATIVRVLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLEL 287
Query: 209 ARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPS----KDVVSWGTMIDGYLQ 264
AR +FD M+ RN SWN M++ +A G + A LF + S D+V+W ++ G+
Sbjct: 288 ARRVFDSMENRNTSSWNSMISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFL 347
Query: 265 VERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFI 324
E L + + M +G PN + ++ A G + H +++ GFDC ++
Sbjct: 348 HGYKEEVLNILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYV 407
Query: 325 QATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKR-- 382
++I Y + A+ F+ +I +WN+L++G+ GM EDA +L N M+K
Sbjct: 408 GTSLIDMYVKNHSLTSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGI 467
Query: 383 --DVYSWSAMISGYA-------------QNEQ----PNM------------------ALE 405
D+ +W+ MISGYA Q + PN+ +L+
Sbjct: 468 KPDLVTWNGMISGYAMWGCGKEALAVLHQTKSLGLTPNVVSWTALISGSSQAGNNRDSLK 527
Query: 406 LFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYA 465
F M GV PN ++ + A AS L++G+ H + N + ++ A+IDMY+
Sbjct: 528 FFAQMQQEGVMPNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYS 587
Query: 466 KCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITF 525
K S+ A +VF I+++T ++ WN +I G A+ G + ++++++K + ++ITF
Sbjct: 588 KSSSLKNAHKVFRRIQNKT--LASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITF 645
Query: 526 IGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMP 585
+LS C ++GL+ G +YF SM + Y + P L+HY CMVDLLGRAG L++A ++I +MP
Sbjct: 646 TALLSACKNSGLIGEGWKYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLIHTMP 705
Query: 586 MKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFS 645
+K D IWG LL + RIH N++ E AAK+L L+P++ + +L+ N+Y+ RWED
Sbjct: 706 LKPDATIWGALLGSCRIHKNLKFAETAAKNLFKLEPNNSANYILMMNLYSIFNRWEDMDH 765
Query: 646 IRKEMRDCGMK 656
+R+ M G++
Sbjct: 766 LRELMGAAGVR 776
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 147/569 (25%), Positives = 265/569 (46%), Gaps = 51/569 (8%)
Query: 25 ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSC 84
+V L+ C A++ +QIH +F+ GL+S+ + N LI++Y+K G + A+ +FDS
Sbjct: 236 TIVRVLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSM 295
Query: 85 STLDPVACNIMISGYIRNDRLNDAREVF------DKTPIKCCVSYTSMIMGFAQNDCWRE 138
+ + N MIS Y LNDA +F D P V++ ++ G + E
Sbjct: 296 ENRNTSSWNSMISSYAALGFLNDAWSLFYELESSDMKPD--IVTWNCLLSGHFLHGYKEE 353
Query: 139 ALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLN 198
L + + M+ G PN ++ SV+ + LG + + HG V++ D V + T+L++
Sbjct: 354 VLNILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLID 413
Query: 199 MYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSK----DVVS 254
MY SL A+++FD MK RNI +WN +++G++ G+ E A L ++ + D+V+
Sbjct: 414 MYVKNHSLTSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVT 473
Query: 255 WGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIV 314
W MI GY EAL + G+ PN V LIS +A + L+ + +
Sbjct: 474 WNGMISGYAMWGCGKEALAVLHQTKSLGLTPNVVSWTALISGSSQAGNNRDSLKFFAQMQ 533
Query: 315 KAGFDCYDFIQATIIHFYAACGRINLAR-------LQFELGIKDHIASWNALIAGFIRNG 367
+ G A+I AC ++L + L G + + ALI + ++
Sbjct: 534 QEGVMPNS---ASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSS 590
Query: 368 MIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFC 427
+++A ++F +Q + + SW+ MI G+A A+ +F+ M GV P+ IT ++
Sbjct: 591 SLKNAHKVFRRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLS 650
Query: 428 AIASSGTLKEG-RWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTS 486
A +SG + EG ++ + + I ++D+ + G ++ A+++ H
Sbjct: 651 ACKNSGLIGEGWKYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLI-HTMPLKPD 709
Query: 487 VSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKL---NSITFIGVLSTCCHAGLVDLGER 543
+ W A++ +H + LK K KL NS +I ++
Sbjct: 710 ATIWGALLGSCRIHKN----LKFAETAAKNLFKLEPNNSANYILMM-------------- 751
Query: 544 YFKSMKSVYNVEPDLKHYGCMVDLLGRAG 572
++ S++N D+ H + +L+G AG
Sbjct: 752 ---NLYSIFNRWEDMDH---LRELMGAAG 774
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 112/449 (24%), Positives = 203/449 (45%), Gaps = 38/449 (8%)
Query: 140 LEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNM 199
LEVF+++ GV+ + + + + + IW +HG +IK D V + L+N
Sbjct: 118 LEVFKELHGKGVVFDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNF 177
Query: 200 YCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMI 259
Y C L E A ++F +P+ + + W I
Sbjct: 178 YGRCWGL-------------------------------EKANQVFHEMPNPEALLWNEAI 206
Query: 260 DGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFD 319
LQ E+L + + ++R M + IV ++ ACG+ A QIH + + G D
Sbjct: 207 ILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQACGKMGALNAAKQIHGYVFRFGLD 266
Query: 320 CYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNM 379
+ +I Y+ G++ LAR F+ + +SWN++I+ + G + DA LF +
Sbjct: 267 SDVSLCNPLISMYSKNGKLELARRVFDSMENRNTSSWNSMISSYAALGFLNDAWSLFYEL 326
Query: 380 Q----KRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTL 435
+ K D+ +W+ ++SG+ + L + M G KPN +M SV AI+ G L
Sbjct: 327 ESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNSSSMTSVLQAISELGFL 386
Query: 436 KEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIIC 495
G+ H YVL N + + ++IDMY K S+ +A VF ++++R ++ WN+++
Sbjct: 387 NMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLTSAQAVFDNMKNR--NIFAWNSLVS 444
Query: 496 GLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVE 555
G + G L++ + +EK IK + +T+ G++S G KS+ +
Sbjct: 445 GYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMISGYAMWGCGKEALAVLHQTKSL-GLT 503
Query: 556 PDLKHYGCMVDLLGRAGQLEDAEEVIRSM 584
P++ + ++ +AG D+ + M
Sbjct: 504 PNVVSWTALISGSSQAGNNRDSLKFFAQM 532
>gi|357507205|ref|XP_003623891.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498906|gb|AES80109.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1288
Score = 321 bits (823), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 193/578 (33%), Positives = 303/578 (52%), Gaps = 35/578 (6%)
Query: 88 DPVAC-NIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDM 146
DP++ N++ S + + A E+F + P + MI G++Q + EA+ + M
Sbjct: 728 DPISIFNLLKSYALSPTNILKANELFRQIPRPTLSHWNIMIRGWSQTNQPIEAIRNYNLM 787
Query: 147 RILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSL 206
+ N +T ++ + + + C +H V+KL D + +S L++ Y L
Sbjct: 788 YSQALFGNNLTYPFLLKACARISNV-SCTTVHARVLKLGFDSDLFVSNALIHGYAGFCEL 846
Query: 207 VEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVE 266
AR +FDEM ER++VSWN ++I GY +
Sbjct: 847 GFARKVFDEMSERDLVSWN-------------------------------SLICGYGRCR 875
Query: 267 RLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQA 326
R SE L ++ M + + V +V ++ AC +G + I + + ++
Sbjct: 876 RYSEVLVVFEEMRMADVKGDAVTMVKVVLACTVLGEWGVVDAMIEYIEENKVEVDVYLGN 935
Query: 327 TIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYS 386
T+I Y ++LAR F+ ++ SWNA+I G+ + G + AR+LF++M RDV S
Sbjct: 936 TLIDMYGRRSMVDLARRVFDRMRDRNMVSWNAMIMGYGKAGNLVAARKLFDDMPHRDVIS 995
Query: 387 WSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVL 446
W++MIS Y+Q Q A+ LF M+ VKP+EIT+ SV A A G L G HEY+
Sbjct: 996 WTSMISSYSQAGQFGKAVRLFQEMMVTKVKPDEITVASVLSACAHIGALDVGEAVHEYIR 1055
Query: 447 NNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLT 506
+ + + A+IDMY KCG++ VF + R SVS W ++I GLA++G A+
Sbjct: 1056 KYDVNADIYVGNALIDMYCKCGAVEKGLSVFEEMGKR-DSVS-WTSVIAGLAVNGSADSA 1113
Query: 507 LKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVD 566
L ++S + + ++ TF+GVL C HAG+VD G YF+SM+ VY + P++KHYGC+VD
Sbjct: 1114 LNLFSLMLREGVRPTHGTFVGVLLACAHAGVVDKGLEYFESMERVYGLTPEMKHYGCVVD 1173
Query: 567 LLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPS 626
LL R+G L A E I+ MPM DVV+W LL+AS++HGN+ + E A K L PS+ +
Sbjct: 1174 LLSRSGNLGRAYEFIKRMPMDPDVVVWRILLSASQVHGNLHLAEIATKKLLETDPSNSGN 1233
Query: 627 RVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
+L SN YA + RWED +R+ M + + + S V
Sbjct: 1234 YILSSNTYAGSNRWEDVIKMRRLMEESNVHKPSASSSV 1271
Score = 169 bits (428), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 128/480 (26%), Positives = 222/480 (46%), Gaps = 71/480 (14%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
L+ C A I+ +H+ + K G +S+ F+ N+LI+ YA
Sbjct: 803 LKAC-ARISNVSCTTVHARVLKLGFDSDLFVSNALIHGYA-------------------- 841
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
G+ L AR+VFD+ + VS+ S+I G+ + + E L VF +MR+
Sbjct: 842 --------GFCE---LGFARKVFDEMSERDLVSWNSLICGYGRCRRYSEVLVVFEEMRMA 890
Query: 150 GVIPNEVTLASVISSSVHLG--GIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLV 207
V + VT+ V+ + LG G+ + + + K+ +D V + L++MY S +
Sbjct: 891 DVKGDAVTMVKVVLACTVLGEWGVVDAMIEYIEENKVEVD--VYLGNTLIDMYGRRSMVD 948
Query: 208 EARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVER 267
AR +FD M++RN+VSWN M+ G+ KAG + AR+LF+ +P +DV+SW +MI Y Q +
Sbjct: 949 LARRVFDRMRDRNMVSWNAMIMGYGKAGNLVAARKLFDDMPHRDVISWTSMISSYSQAGQ 1008
Query: 268 LSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQAT 327
+A+ +++ M+ + P+++ + ++SAC A G +H I K + ++
Sbjct: 1009 FGKAVRLFQEMMVTKVKPDEITVASVLSACAHIGALDVGEAVHEYIRKYDVNADIYVGNA 1068
Query: 328 IIHFYAACGRINLARLQF-ELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYS 386
+I Y CG + F E+G +D + SW ++IAG NG
Sbjct: 1069 LIDMYCKCGAVEKGLSVFEEMGKRDSV-SWTSVIAGLAVNG------------------- 1108
Query: 387 WSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVL 446
+ AL LF M+ GV+P T V V A A +G + +G E +
Sbjct: 1109 ------------SADSALNLFSLMLREGVRPTHGTFVGVLLACAHAGVVDKGLEYFESME 1156
Query: 447 N-NSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANL 505
+T ++D+ ++ G++ A+E F V W ++ +HG+ +L
Sbjct: 1157 RVYGLTPEMKHYGCVVDLLSRSGNLGRAYE-FIKRMPMDPDVVVWRILLSASQVHGNLHL 1215
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 142/324 (43%), Gaps = 19/324 (5%)
Query: 331 FYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAM 390
F +C N+ + EL D I+ +N L + + I A +LF + + + W+ M
Sbjct: 711 FSLSCSFSNMIK---ELLPTDPISIFNLLKSYALSPTNILKANELFRQIPRPTLSHWNIM 767
Query: 391 ISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSI 450
I G++Q QP A+ ++ M + N +T + A A + H VL
Sbjct: 768 IRGWSQTNQPIEAIRNYNLMYSQALFGNNLTYPFLLKACARISNVS-CTTVHARVLKLGF 826
Query: 451 TLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIY 510
+ +S A+I YA + A +VF + +R + WN++ICG + L ++
Sbjct: 827 DSDLFVSNALIHGYAGFCELGFARKVFDEMSER--DLVSWNSLICGYGRCRRYSEVLVVF 884
Query: 511 SDLEKRNIKLNSITFIGVLSTCC---HAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDL 567
++ ++K +++T + V+ C G+VD Y + K VE D+ ++D+
Sbjct: 885 EEMRMADVKGDAVTMVKVVLACTVLGEWGVVDAMIEYIEENK----VEVDVYLGNTLIDM 940
Query: 568 LGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGP-S 626
GR ++ A V M + ++V W ++ GN+ AA+ L P S
Sbjct: 941 YGRRSMVDLARRVFDRMRDR-NMVSWNAMIMGYGKAGNLV----AARKLFDDMPHRDVIS 995
Query: 627 RVLLSNIYADAGRWEDAFSIRKEM 650
+ + Y+ AG++ A + +EM
Sbjct: 996 WTSMISSYSQAGQFGKAVRLFQEM 1019
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 107/268 (39%), Gaps = 50/268 (18%)
Query: 23 ELALVSALRYCSAHI-AVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMF 81
E+ + S L C AHI A+ G+ +H I K + ++ ++ N+LI++Y KCG + + S+F
Sbjct: 1028 EITVASVLSAC-AHIGALDVGEAVHEYIRKYDVNADIYVGNALIDMYCKCGAVEKGLSVF 1086
Query: 82 DSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALE 141
+ D VS+TS+I G A N AL
Sbjct: 1087 EEMGKRD-------------------------------SVSWTSVIAGLAVNGSADSALN 1115
Query: 142 VFRDMRILGVIPNEVTLASVISSSVHLGGI-------WECRMLHGLVIKLMIDGFVIIST 194
+F M GV P T V+ + H G + ++GL ++ G V+
Sbjct: 1116 LFSLMLREGVRPTHGTFVGVLLACAHAGVVDKGLEYFESMERVYGLTPEMKHYGCVV--- 1172
Query: 195 NLLNMYCVCSSLVEARSLFDEMK-ERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVV 253
++ +L A M + ++V W ++L+ G + LA +++ D
Sbjct: 1173 ---DLLSRSGNLGRAYEFIKRMPMDPDVVVWRILLSASQVHGNLHLAEIATKKLLETDPS 1229
Query: 254 SWGTMI---DGYLQVERLSEALTMYRAM 278
+ G I + Y R + + M R M
Sbjct: 1230 NSGNYILSSNTYAGSNRWEDVIKMRRLM 1257
>gi|296083564|emb|CBI23556.3| unnamed protein product [Vitis vinifera]
Length = 827
Score = 321 bits (823), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 198/644 (30%), Positives = 324/644 (50%), Gaps = 93/644 (14%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSG-LESNTFIQNSLINLYAKCGLISQAKSMF 81
E + +R CS G+ I+ + K+G LE++ + LI+++ K
Sbjct: 146 EYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVK----------- 194
Query: 82 DSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALE 141
+ L A +VFDK P + V++T MI FAQ C R+A++
Sbjct: 195 -------------------GSGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDAID 235
Query: 142 VFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYC 201
+F DM + G +P+ T +SV+S+ LG + + LH VI+L + V + +L++MY
Sbjct: 236 LFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYA 295
Query: 202 VCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDG 261
C A G V+ +R++FE++P +V+SW +I
Sbjct: 296 KC----------------------------AADGSVDDSRKVFEQMPEHNVMSWTAIITA 327
Query: 262 YLQV-ERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDC 320
Y+Q E EA+ ++ M+ I PN ++ ACG G Q++S VK
Sbjct: 328 YVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVK----- 382
Query: 321 YDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ 380
LGI N+LI+ + R+G +EDAR+ F+ +
Sbjct: 383 --------------------------LGIASVNCVGNSLISMYARSGRMEDARKAFDILF 416
Query: 381 KRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRW 440
++++ S++A++ GYA+N + A LF+ + D G+ + T S+ AS G + +G
Sbjct: 417 EKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQ 476
Query: 441 AHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMH 500
H +L N + A+I MY++CG+I AF+VF + DR +V W ++I G A H
Sbjct: 477 IHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDR--NVISWTSMITGFAKH 534
Query: 501 GDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKH 560
G A L+++ + + K N IT++ VLS C H G++ G+++F SM + + P ++H
Sbjct: 535 GFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEH 594
Query: 561 YGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQ 620
Y CMVDLLGR+G L +A E I SMP+ AD ++W TLL A R+HGN E+G AA+ + +
Sbjct: 595 YACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQE 654
Query: 621 PSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
P + +LLSN++A AG+W+D IRK M++ + + G S +
Sbjct: 655 PDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWI 698
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 95/380 (25%), Positives = 175/380 (46%), Gaps = 47/380 (12%)
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSK-DVVSWGTMIDGYLQVERL 268
R L E + V N +++ ++K G E AR +FE + +K D+VSW M+ +
Sbjct: 68 RKLMQSGLELDSVVLNTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSME 127
Query: 269 SEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATI 328
+A+ + ML G PN+ +I AC A G I+ +VK G +++A +
Sbjct: 128 WQAIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTG-----YLEADV 182
Query: 329 IHFYAACGRINLARLQFELGIKDHIASWNALIAGFIR-NGMIEDARQLFNNMQKRDVYSW 387
C I++ F++ +G + A ++F+ M +R++ +W
Sbjct: 183 C---VGCELIDM----------------------FVKGSGDLGSAYKVFDKMPERNLVTW 217
Query: 388 SAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLN 447
+ MI+ +AQ A++LF M +G P+ T SV A G L G+ H V+
Sbjct: 218 TLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIR 277
Query: 448 NSITLNDNLSAAIIDMYAKC---GSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDAN 504
+ L+ + +++DMYAKC GS++ + +VF + + +V W AII G+ +
Sbjct: 278 LGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEH--NVMSWTAIITAYVQSGECD 335
Query: 505 L-TLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGC 563
++++ + +I+ N +F VL C + GE+ + Y V+ + C
Sbjct: 336 KEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYS-----YAVKLGIASVNC 390
Query: 564 ----MVDLLGRAGQLEDAEE 579
++ + R+G++EDA +
Sbjct: 391 VGNSLISMYARSGRMEDARK 410
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 92/371 (24%), Positives = 162/371 (43%), Gaps = 46/371 (12%)
Query: 263 LQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD 322
L V RL A + M P+ L+ +C R F G +H ++++G +
Sbjct: 20 LDVGRLHHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDS 79
Query: 323 FIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNM-QK 381
+ T+I Y+ CG E AR +F M K
Sbjct: 80 VVLNTLISLYSKCGDT-------------------------------ETARLIFEGMGNK 108
Query: 382 RDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWA 441
RD+ SWSAM+S +A N A+ F M++ G PNE +V A +++ G
Sbjct: 109 RDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWVGEII 168
Query: 442 HEYVLNNSITLND-NLSAAIIDMYAK-CGSINTAFEVFYHIRDRTTSVSPWNAIICGLAM 499
+ +V+ D + +IDM+ K G + +A++VF + +R ++ W +I A
Sbjct: 169 YGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPER--NLVTWTLMITRFAQ 226
Query: 500 HGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLK 559
G A + ++ D+E + T+ VLS C GL+ LG++ + + + D+
Sbjct: 227 LGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRL-GLALDVC 285
Query: 560 HYGC-MVDLLGRA---GQLEDAEEVIRSMPMKADVVIWGTLLAASRIHG--NVEVGERAA 613
GC +VD+ + G ++D+ +V MP + +V+ W ++ A G + E E
Sbjct: 286 -VGCSLVDMYAKCAADGSVDDSRKVFEQMP-EHNVMSWTAIITAYVQSGECDKEAIELFC 343
Query: 614 KSLAG-LQPSH 623
K ++G ++P+H
Sbjct: 344 KMISGHIRPNH 354
>gi|413944077|gb|AFW76726.1| hypothetical protein ZEAMMB73_427029 [Zea mays]
Length = 646
Score = 321 bits (822), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 168/449 (37%), Positives = 269/449 (59%), Gaps = 6/449 (1%)
Query: 219 RNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMY-RA 277
+++++ N +++ + + L+ AR+LF+ + +DVVSW T+IDGY + EA ++ R
Sbjct: 164 QSVLAGNALVHMYTSSMLLPDARKLFDEMADRDVVSWTTLIDGYARGGLPDEAWRVFCRM 223
Query: 278 MLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGR 337
++ + + PN+V +V SA G+ G G +H IV++G ++ ++ + CG
Sbjct: 224 VVAESVWPNEVTLVAAASAAGQMGLLGLGRTVHQCIVESGGRMSVNLENALVDMFGKCGC 283
Query: 338 INLARLQFE-LGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQ 396
+ A+ F+ + IKD + SW ++++ + + G +E+A +LF + R+V SWS M++ Y+
Sbjct: 284 VAAAKEVFDGMPIKD-VYSWTSMVSAYAKCGDLENAAKLFKEIPNRNVVSWSCMVAAYSH 342
Query: 397 NEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHE-YVLNNSITLNDN 455
P+ A+ +F+ M+ AGV+P + T+VSV A A +L G W ++ Y++++ + L N
Sbjct: 343 ANMPDEAIRIFNDMIAAGVEPIDATLVSVLSACAQLCSLDVGTWLYDTYIVSHKVELTPN 402
Query: 456 LSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEK 515
LS A IDM+AKCG + A +F ++ D+ +V WN +I +HG L ++ + +
Sbjct: 403 LSNAFIDMFAKCGDVGAASRLFSNMEDK--NVVSWNTMIMAHGLHGQPEEALHLFQEFKG 460
Query: 516 RNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLE 575
I + T+IGVLS C H GLV G +FK MK VY +EP +HY CM+DLLG+ G L+
Sbjct: 461 NGILPDEATYIGVLSACSHGGLVSEGRCHFKEMKIVYGIEPRAEHYACMIDLLGKVGLLQ 520
Query: 576 DAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYA 635
+A EV RSMP+ AD WG LL A R+HGNVE+G+ AA LAGL PS VL+S IYA
Sbjct: 521 EAFEVARSMPVGADEAGWGALLNACRMHGNVEIGKCAADKLAGLDPSDSGIYVLMSQIYA 580
Query: 636 DAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
+W +R MRD +K+ PG S +
Sbjct: 581 SKSKWGQVKMLRTVMRDRRVKKNPGCSSI 609
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 122/475 (25%), Positives = 207/475 (43%), Gaps = 43/475 (9%)
Query: 42 GQQIHSL-IFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP-------VACN 93
G+ H+L +F+ L + I K S + + C +A N
Sbjct: 111 GKPTHALTLFRRVLRDRLAVDARTIVFAVKAAATSSSPTEAIHCVAFKRGFIGQSVLAGN 170
Query: 94 IMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL-GVI 152
++ Y + L DAR++FD+ + VS+T++I G+A+ EA VF M + V
Sbjct: 171 ALVHMYTSSMLLPDARKLFDEMADRDVVSWTTLIDGYARGGLPDEAWRVFCRMVVAESVW 230
Query: 153 PNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSL 212
PNEVTL + S++ +G + R +H +++ V + L++M+ C + A+ +
Sbjct: 231 PNEVTLVAAASAAGQMGLLGLGRTVHQCIVESGGRMSVNLENALVDMFGKCGCVAAAKEV 290
Query: 213 FDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEAL 272
FD M +++ SW M++ +AK G +E A +LF+ IP+++VVSW M+ Y EA+
Sbjct: 291 FDGMPIKDVYSWTSMVSAYAKCGDLENAAKLFKEIPNRNVVSWSCMVAAYSHANMPDEAI 350
Query: 273 TMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIH-SIIVKAGFDCYDFIQATIIHF 331
++ M+ G+ P D +V ++SAC + + G ++ + IV + + I
Sbjct: 351 RIFNDMIAAGVEPIDATLVSVLSACAQLCSLDVGTWLYDTYIVSHKVELTPNLSNAFIDM 410
Query: 332 YAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMI 391
+A CG + A F ++ SWN +I +G
Sbjct: 411 FAKCGDVGAASRLFSNMEDKNVVSWNTMIMAHGLHG------------------------ 446
Query: 392 SGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWA-HEYVLNNSI 450
QP AL LF G+ P+E T + V A + G + EGR E + I
Sbjct: 447 -------QPEEALHLFQEFKGNGILPDEATYIGVLSACSHGGLVSEGRCHFKEMKIVYGI 499
Query: 451 TLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANL 505
A +ID+ K G + AFEV + W A++ MHG+ +
Sbjct: 500 EPRAEHYACMIDLLGKVGLLQEAFEVARSMPVGADEAG-WGALLNACRMHGNVEI 553
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 103/388 (26%), Positives = 172/388 (44%), Gaps = 75/388 (19%)
Query: 256 GTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVK 315
TM+ G+L+ + + ALT++R +L D +A + IV + A + + E IH + K
Sbjct: 101 ATMMRGFLRAGKPTHALTLFRRVLRDRLAVDARTIVFAVKAAATSSSPTEA--IHCVAFK 158
Query: 316 AGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQL 375
GF I + + NAL+ + + ++ DAR+L
Sbjct: 159 RGF------------------------------IGQSVLAGNALVHMYTSSMLLPDARKL 188
Query: 376 FNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDA-GVKPNEITMVSVFCAIASSGT 434
F+ M RDV SW+ +I GYA+ P+ A +F MV A V PNE+T+V+ A G
Sbjct: 189 FDEMADRDVVSWTTLIDGYARGGLPDEAWRVFCRMVVAESVWPNEVTLVAAASAAGQMGL 248
Query: 435 LKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVF--YHIRDRTTSVSPWNA 492
L GR H+ ++ + ++ NL A++DM+ KCG + A EVF I+D V W +
Sbjct: 249 LGLGRTVHQCIVESGGRMSVNLENALVDMFGKCGCVAAAKEVFDGMPIKD----VYSWTS 304
Query: 493 IICGLAMHGDANLTLKIYSDLEKRN-------------------------------IKLN 521
++ A GD K++ ++ RN ++
Sbjct: 305 MVSAYAKCGDLENAAKLFKEIPNRNVVSWSCMVAAYSHANMPDEAIRIFNDMIAAGVEPI 364
Query: 522 SITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVE--PDLKHYGCMVDLLGRAGQLEDAEE 579
T + VLS C +D+G + + + VE P+L + +D+ + G + A
Sbjct: 365 DATLVSVLSACAQLCSLDVGTWLYDTYIVSHKVELTPNLSN--AFIDMFAKCGDVGAASR 422
Query: 580 VIRSMPMKADVVIWGTLLAASRIHGNVE 607
+ +M K +VV W T++ A +HG E
Sbjct: 423 LFSNMEDK-NVVSWNTMIMAHGLHGQPE 449
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/361 (24%), Positives = 160/361 (44%), Gaps = 54/361 (14%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E+ LV+A + G+ +H I +SG + ++N+L++++ KCG ++ AK +FD
Sbjct: 233 EVTLVAAASAAGQMGLLGLGRTVHQCIVESGGRMSVNLENALVDMFGKCGCVAAAKEVFD 292
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
D + M+S Y + L +A ++F + P + VS++ M+ ++ + EA+ +
Sbjct: 293 GMPIKDVYSWTSMVSAYAKCGDLENAAKLFKEIPNRNVVSWSCMVAAYSHANMPDEAIRI 352
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLG----GIWECRMLHGLVIKLMIDGFVIISTNLLN 198
F DM GV P + TL SV+S+ L G W + ++ ++ +S ++
Sbjct: 353 FNDMIAAGVEPIDATLVSVLSACAQLCSLDVGTW---LYDTYIVSHKVELTPNLSNAFID 409
Query: 199 MYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTM 258
M+ C + A LF M+++N+VSWN M+ G E
Sbjct: 410 MFAKCGDVGAASRLFSNMEDKNVVSWNTMIMAHGLHGQPE-------------------- 449
Query: 259 IDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGF 318
EAL +++ +GI P++ + ++SAC EG + H +K +
Sbjct: 450 -----------EALHLFQEFKGNGILPDEATYIGVLSACSHGGLVSEG-RCHFKEMKIVY 497
Query: 319 DCYDFIQATIIHFYAAC-----GRINLARLQFELG----IKDHIASWNALIAGFIRNGMI 369
I+ H+ AC G++ L + FE+ + A W AL+ +G +
Sbjct: 498 G----IEPRAEHY--ACMIDLLGKVGLLQEAFEVARSMPVGADEAGWGALLNACRMHGNV 551
Query: 370 E 370
E
Sbjct: 552 E 552
>gi|356498922|ref|XP_003518295.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Glycine max]
Length = 682
Score = 321 bits (822), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 178/469 (37%), Positives = 277/469 (59%), Gaps = 17/469 (3%)
Query: 196 LLNMYCVCSSLVEARSLFDEM--KERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVV 253
+++ Y C + EA LF M E+N+++W M+ G AK +E AR F+ +P + V
Sbjct: 171 IISGYWKCGNEKEATRLFCMMGESEKNVITWTTMVTGHAKMRNLETARMYFDEMPERRVA 230
Query: 254 SWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSII 313
SW M+ GY Q E + ++ ML G P++ V ++S+C + G+ SI+
Sbjct: 231 SWNAMLSGYAQSGAAQETVRLFDDMLSSGNEPDETTWVTVLSSCS---SLGDPCLAESIV 287
Query: 314 VK---AGFDCYDFIQATIIHFYAACGRINLARLQFE-LGIKDHIASWNALIAGFIRNGMI 369
K F F++ ++ +A CG + +A+ FE LG+ + +WNA+I+ + R G +
Sbjct: 288 RKLDRMNFRSNYFVKTALLDMHAKCGNLEVAQKIFEQLGVYKNSVTWNAMISAYARVGDL 347
Query: 370 EDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAG-VKPNEITMVSVFCA 428
AR LFN M +R+ SW++MI+GYAQN + A++LF M+ + KP+E+TMVSVF A
Sbjct: 348 SLARDLFNKMPERNTVSWNSMIAGYAQNGESLKAIQLFKEMISSKDSKPDEVTMVSVFSA 407
Query: 429 IASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVS 488
G L G WA + N I L+ + ++I MY +CGS+ A F + T +
Sbjct: 408 CGHLGRLGLGNWAVSILHENHIKLSISGYNSLIFMYLRCGSMEDARITFQEMA--TKDLV 465
Query: 489 PWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSM 548
+N +I GLA HG ++K+ S +++ I + IT+IGVL+ C HAGL++ G + F+S+
Sbjct: 466 SYNTLISGLAAHGHGTESIKLMSKMKEDGIGPDRITYIGVLTACSHAGLLEEGWKVFESI 525
Query: 549 KSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEV 608
K PD+ HY CM+D+LGR G+LE+A ++I+SMPM+ I+G+LL A+ IH VE+
Sbjct: 526 KV-----PDVDHYACMIDMLGRVGKLEEAVKLIQSMPMEPHAGIYGSLLNATSIHKQVEL 580
Query: 609 GERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKR 657
GE AA L ++P + + VLLSNIYA AGRW+D +R +MR G+K+
Sbjct: 581 GELAAAKLFKVEPHNSGNYVLLSNIYALAGRWKDVDKVRDKMRKQGVKK 629
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 129/479 (26%), Positives = 227/479 (47%), Gaps = 88/479 (18%)
Query: 42 GQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIR 101
G +H+ + K G + ++N+++ +YAK G I A+ +FD N++ISGY +
Sbjct: 118 GMLLHAYLLKLGHSHDHHVRNAIMGIYAKYGCIELARKLFDEMPDRTAADWNVIISGYWK 177
Query: 102 --NDR-------------------------------LNDAREVFDKTPIKCCVSYTSMIM 128
N++ L AR FD+ P + S+ +M+
Sbjct: 178 CGNEKEATRLFCMMGESEKNVITWTTMVTGHAKMRNLETARMYFDEMPERRVASWNAMLS 237
Query: 129 GFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDG 188
G+AQ+ +E + +F DM G P+E T +V+SS LG C + +V KL
Sbjct: 238 GYAQSGAAQETVRLFDDMLSSGNEPDETTWVTVLSSCSSLGD--PC-LAESIVRKLDRMN 294
Query: 189 F---VIISTNLLNMYCVCSSLVEARSLFDEMK-ERNIVSWNVMLNGFAKAGLVELARELF 244
F + T LL+M+ C +L A+ +F+++ +N V+WN M++ +A+ G + LAR+LF
Sbjct: 295 FRSNYFVKTALLDMHAKCGNLEVAQKIFEQLGVYKNSVTWNAMISAYARVGDLSLARDLF 354
Query: 245 ERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIA-PNDVMIVDLISACGRAMAF 303
++P ++ VSW +MI GY Q +A+ +++ M+ + P++V +V + SACG
Sbjct: 355 NKMPERNTVSWNSMIAGYAQNGESLKAIQLFKEMISSKDSKPDEVTMVSVFSACGHLGRL 414
Query: 304 GEGLQIHSII----VKAGFDCYDFIQATIIHFYAACGRINLARLQF-ELGIKDHIASWNA 358
G G SI+ +K Y+ ++I Y CG + AR+ F E+ KD + S+N
Sbjct: 415 GLGNWAVSILHENHIKLSISGYN----SLIFMYLRCGSMEDARITFQEMATKD-LVSYNT 469
Query: 359 LIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPN 418
LI+G +G ++ +L + M+ + G+ P+
Sbjct: 470 LISGLAAHGHGTESIKLMSKMK-------------------------------EDGIGPD 498
Query: 419 EITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLND-NLSAAIIDMYAKCGSINTAFEV 476
IT + V A + +G L+EG + + SI + D + A +IDM + G + A ++
Sbjct: 499 RITYIGVLTACSHAGLLEEG-----WKVFESIKVPDVDHYACMIDMLGRVGKLEEAVKL 552
Score = 43.1 bits (100), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 61/285 (21%), Positives = 120/285 (42%), Gaps = 24/285 (8%)
Query: 374 QLFNNMQKRDVYSWSAMISGYAQ-NEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASS 432
+F +V+ ++ M+ Y+Q + + LF M N+I + F +
Sbjct: 57 HIFRAATYPNVHVFTCMLKYYSQIGATTQVVVSLFKHMQ----YYNDIKPYTSFYPVLIK 112
Query: 433 GTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNA 492
K G H Y+L + + ++ AI+ +YAK G I A ++F + DRT + WN
Sbjct: 113 SAGKAGMLLHAYLLKLGHSHDHHVRNAIMGIYAKYGCIELARKLFDEMPDRT--AADWNV 170
Query: 493 IICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVY 552
II G G+ +++ + + + N IT+ +++ ++ YF M
Sbjct: 171 IISGYWKCGNEKEATRLFCMMGES--EKNVITWTTMVTGHAKMRNLETARMYFDEMP--- 225
Query: 553 NVEPDLKHYGCMVDLLGRAGQLEDAEEVIR------SMPMKADVVIWGTLLAASRIHGNV 606
E + + M+ ++G A+E +R S + D W T+L++ G+
Sbjct: 226 --ERRVASWNAMLSGYAQSGA---AQETVRLFDDMLSSGNEPDETTWVTVLSSCSSLGDP 280
Query: 607 EVGERAAKSLAGLQ-PSHGPSRVLLSNIYADAGRWEDAFSIRKEM 650
+ E + L + S+ + L +++A G E A I +++
Sbjct: 281 CLAESIVRKLDRMNFRSNYFVKTALLDMHAKCGNLEVAQKIFEQL 325
>gi|307136370|gb|ADN34182.1| pentatricopeptide repeat-containing protein [Cucumis melo subsp.
melo]
Length = 1131
Score = 321 bits (822), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 195/641 (30%), Positives = 322/641 (50%), Gaps = 95/641 (14%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E S C++ + G Q+H+++ K+ SN F+ N+L+++YAK G
Sbjct: 410 EFTFTSIFSACASLHYLDFGGQLHTVMIKNKFTSNLFVANALVDMYAKSG---------- 459
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
L +AR+ F+ I VS+ ++I+G+ Q + EA +
Sbjct: 460 ---------------------ALKEARKQFEFMKIHDNVSWNAIIVGYVQEEYNDEAFFM 498
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
FR M GV+P+EV+LAS++S+ ++ + + H L++K+ +D ++L++MY
Sbjct: 499 FRRMVSNGVLPDEVSLASIVSACANVKEFKQGQQCHCLLVKVGLDTSTCAGSSLIDMYVK 558
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
C G+V AR++F +P ++VVS +I GY
Sbjct: 559 C-------------------------------GVVLAARDVFYSMPYRNVVSINALIAGY 587
Query: 263 LQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD 322
+ L EA+ +++ + G+ P +V L+ C A G QIH ++K GF
Sbjct: 588 -TMSHLEEAIHLFQEIQMVGLKPTEVTFAGLLDGCDGAFMLNLGRQIHGQVMKWGF---- 642
Query: 323 FIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ-K 381
+ ++ C +N R D+ LF+ +Q
Sbjct: 643 LSSSEMVCVSLLCMYMNSQRF--------------------------ADSETLFSELQYP 676
Query: 382 RDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWA 441
+ + W+A+ISGYAQ AL+ + M + P++ T SV A A +L+ G+
Sbjct: 677 KGLVVWTALISGYAQQNHHEKALQFYQHMRSDNILPDQATFASVLRACAGMSSLQTGQEV 736
Query: 442 HEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHG 501
H + + +++ +++IDMYAKCG + + +VF+ + R + +S WN++I GLA +G
Sbjct: 737 HSLIFHTGFNMDEITCSSLIDMYAKCGDVKGSLQVFHEMPRRNSVIS-WNSMIVGLAKNG 795
Query: 502 DANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHY 561
A L+I+ +E+++I + +TF+GVLS C HAG V G + F M + Y ++P + H
Sbjct: 796 YAEEALEIFKQMEQQSIIPDEVTFLGVLSACSHAGRVSEGRKVFDLMVNNYKLQPRVDHL 855
Query: 562 GCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQP 621
GCMVD+LGR G L +AEE I + KAD ++W TLL A R HG+ G+RAA L L+P
Sbjct: 856 GCMVDILGRWGFLNEAEEFINKLGCKADPMLWSTLLGACRKHGDEVRGKRAANKLMELKP 915
Query: 622 SHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
S VLLS +YA++ W A S+R+EM+ G+K+LPG+S
Sbjct: 916 QSSSSYVLLSGLYAESENWSGADSLRREMKLKGVKKLPGYS 956
Score = 215 bits (548), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 160/617 (25%), Positives = 270/617 (43%), Gaps = 110/617 (17%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E L CS ++ G+Q+H +FK G +F Q LI++YAKC + A+ +FD
Sbjct: 142 EFTFAMVLSACSGLQDINYGKQVHCGVFKMGFGFRSFCQGGLIDMYAKCRNLRDARLVFD 201
Query: 83 SCSTLDPVACNIMISGYIRN-----------------------------------DRLND 107
LD V+ +I+GY+R+ RL D
Sbjct: 202 GALNLDTVSWTTLIAGYVRDGFPMEAVKVFDKMQRVGHVPDQIALVTVINAYVALGRLAD 261
Query: 108 AREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVH 167
AR++F + P V++ MI G A+ EA+ F +++ G+ +L SV+S+
Sbjct: 262 ARKLFTQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSLGSVLSAIAS 321
Query: 168 LGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVM 227
L + M+H IK +D V + + L+NMY CS + A+ +F+ + ERNIV WN M
Sbjct: 322 LSMLNYGSMVHAQAIKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAM 381
Query: 228 LNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPND 287
L GFA+ GL + E + + M G P++
Sbjct: 382 LGGFAQNGLAQ-------------------------------EVMEFFSYMKRHGPQPDE 410
Query: 288 VMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFE- 346
+ SAC G Q+H++++K F F+ ++ YA G + AR QFE
Sbjct: 411 FTFTSIFSACASLHYLDFGGQLHTVMIKNKFTSNLFVANALVDMYAKSGALKEARKQFEF 470
Query: 347 LGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALEL 406
+ I D++ SWNA+I GY Q E + A +
Sbjct: 471 MKIHDNV-SWNAIIV-------------------------------GYVQEEYNDEAFFM 498
Query: 407 FHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAK 466
F MV GV P+E+++ S+ A A+ K+G+ H ++ + + +++IDMY K
Sbjct: 499 FRRMVSNGVLPDEVSLASIVSACANVKEFKQGQQCHCLLVKVGLDTSTCAGSSLIDMYVK 558
Query: 467 CGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFI 526
CG + A +VFY + R +V NA+I G M + ++ +++ +K +TF
Sbjct: 559 CGVVLAARDVFYSMPYR--NVVSINALIAGYTM-SHLEEAIHLFQEIQMVGLKPTEVTFA 615
Query: 527 GVLSTCCHAGLVDLGER-YFKSMKSVYNVEPDLKHYGCMVDLLG---RAGQLEDAEEVIR 582
G+L C A +++LG + + + MK + ++ V LL + + D+E +
Sbjct: 616 GLLDGCDGAFMLNLGRQIHGQVMKWGFLSSSEM----VCVSLLCMYMNSQRFADSETLFS 671
Query: 583 SMPMKADVVIWGTLLAA 599
+ +V+W L++
Sbjct: 672 ELQYPKGLVVWTALISG 688
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 141/623 (22%), Positives = 253/623 (40%), Gaps = 106/623 (17%)
Query: 38 AVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMIS 97
A+S + IHS K G+ + N +++LY KCG + A+ F D A N ++S
Sbjct: 56 ALSTAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSVLS 115
Query: 98 GYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVT 157
Y+ + + F C+ W GV PNE T
Sbjct: 116 MYLDHGLFATVVQSF------VCM--------------WNH-----------GVRPNEFT 144
Query: 158 LASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMK 217
A V+S+ L I + +H V K+ L++MY C +L +AR +FD
Sbjct: 145 FAMVLSACSGLQDINYGKQVHCGVFKMGFGFRSFCQGGLIDMYAKCRNLRDARLVFDGAL 204
Query: 218 ERNIVSWNVMLNGFAKAG-----------------------LVEL------------ARE 242
+ VSW ++ G+ + G LV + AR+
Sbjct: 205 NLDTVSWTTLIAGYVRDGFPMEAVKVFDKMQRVGHVPDQIALVTVINAYVALGRLADARK 264
Query: 243 LFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMA 302
LF +IP+ +VV+W MI G+ + EA++ + + G+ + ++SA
Sbjct: 265 LFTQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSLGSVLSAIASLSM 324
Query: 303 FGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAG 362
G +H+ +K G D ++ + +++ YA C +++ A+ F + +I WNA++ G
Sbjct: 325 LNYGSMVHAQAIKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGG 384
Query: 363 FIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITM 422
F +NG+ ++ + F+ M++ G +P+E T
Sbjct: 385 FAQNGLAQEVMEFFSYMKRH-------------------------------GPQPDEFTF 413
Query: 423 VSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTA---FEVFYH 479
S+F A AS L G H ++ N T N ++ A++DMYAK G++ A FE F
Sbjct: 414 TSIFSACASLHYLDFGGQLHTVMIKNKFTSNLFVANALVDMYAKSGALKEARKQFE-FMK 472
Query: 480 IRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVD 539
I D + WNAII G + ++ + + + ++ ++S C +
Sbjct: 473 IHDNVS----WNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVKEFK 528
Query: 540 LGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAA 599
G++ + V ++ ++D+ + G + A +V SMP + V I +
Sbjct: 529 QGQQCHCLLVKV-GLDTSTCAGSSLIDMYVKCGVVLAARDVFYSMPYRNVVSINALIAGY 587
Query: 600 SRIHGNVEVGERAAKSLAGLQPS 622
+ H + + GL+P+
Sbjct: 588 TMSHLEEAIHLFQEIQMVGLKPT 610
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 93/219 (42%), Gaps = 21/219 (9%)
Query: 434 TLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAI 493
L + H L + L L I+D+Y KCG+++ A + F + + V WN++
Sbjct: 56 ALSTAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKK--DVFAWNSV 113
Query: 494 ICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMK-SVY 552
+ HG ++ + + ++ N TF VLS C +GL D+ Y K + V+
Sbjct: 114 LSMYLDHGLFATVVQSFVCMWNHGVRPNEFTFAMVLSAC--SGLQDI--NYGKQVHCGVF 169
Query: 553 NVEPDLKHY--GCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVG- 609
+ + + G ++D+ + L DA V + D V W TL+A G V G
Sbjct: 170 KMGFGFRSFCQGGLIDMYAKCRNLRDARLVFDG-ALNLDTVSWTTLIA-----GYVRDGF 223
Query: 610 -ERAAKSLAGLQP-SHGPSRVLLS---NIYADAGRWEDA 643
A K +Q H P ++ L N Y GR DA
Sbjct: 224 PMEAVKVFDKMQRVGHVPDQIALVTVINAYVALGRLADA 262
>gi|21741755|emb|CAD39781.1| OSJNBa0060B20.9 [Oryza sativa Japonica Group]
Length = 897
Score = 321 bits (822), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 206/657 (31%), Positives = 334/657 (50%), Gaps = 65/657 (9%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
L L+ C + G H LI +G ESN FI N+L+ +Y++CG + +A +FD
Sbjct: 162 HFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFD 221
Query: 83 SCSTL---DPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREA 139
+ D ++ N ++S ++++ A ++F K T ++ N+ R
Sbjct: 222 EITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKM--------TLIVHEKPTNE--RSD 271
Query: 140 LEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNM 199
+ +++ +++ + L + + + +HG I+ V + L++
Sbjct: 272 I---------------ISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDA 316
Query: 200 YCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELF-----ERIPSKDVVS 254
Y C + A +F+ M+ +++VSWN M+ G++++G E A ELF E IP DVV+
Sbjct: 317 YAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIP-LDVVT 375
Query: 255 WGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIV 314
W +I GY Q EAL ++R M+ G PN V I+ ++SAC AF +G +IH+ +
Sbjct: 376 WTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSL 435
Query: 315 KAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDH-IASWNALIAGFIRNGMIEDAR 373
K +C L L + G +D + +NALI + + + AR
Sbjct: 436 K---NC-------------------LLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAAR 473
Query: 374 QLFNN--MQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDA--GVKPNEITMVSVFCAI 429
+F++ +++R+V +W+ MI G+AQ N AL+LF M+ GV PN T+ + A
Sbjct: 474 SIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMAC 533
Query: 430 ASSGTLKEGRWAHEYVLNNSITLNDNLSAA--IIDMYAKCGSINTAFEVFYHIRDRTTSV 487
A ++ G+ H YVL + + A +IDMY+KCG ++TA VF + + S
Sbjct: 534 AHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQK--SA 591
Query: 488 SPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKS 547
W +++ G MHG + L I+ + K + ITF+ VL C H G+VD G YF S
Sbjct: 592 ISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDS 651
Query: 548 MKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVE 607
M + Y + P +HY C +DLL R+G+L+ A ++ MPM+ V+W LL+A R+H NVE
Sbjct: 652 MSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVALLSACRVHSNVE 711
Query: 608 VGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
+ E A L + + S L+SNIYA AGRW+D IR M+ G+K+ PG S V
Sbjct: 712 LAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSWV 768
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 142/541 (26%), Positives = 247/541 (45%), Gaps = 89/541 (16%)
Query: 1 TPLDHFH--SVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNT 58
T LD F ++ +K + SD +++V+ L C + AV Q +++H ++G +
Sbjct: 249 TALDLFSKMTLIVHEKPTNERSDI-ISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDV 307
Query: 59 FIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVF-----D 113
F+ N+LI+ YAKCGL+ A +F+ D V+ N M++GY ++ A E+F +
Sbjct: 308 FVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKE 367
Query: 114 KTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWE 173
P+ V++T++I G++Q C EAL +FR M G +PN VT+ SV+S+ LG +
Sbjct: 368 NIPLD-VVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQ 426
Query: 174 CRMLHGLVIKLMI----------DGFVIISTNLLNMYCVCSSLVEARSLFDE--MKERNI 221
+H +K + D +++ L++MY C S ARS+FD+ ++ERN+
Sbjct: 427 GTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNV 486
Query: 222 VSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCD 281
V+W VM+ G A+ G A +LF VE +SE
Sbjct: 487 VTWTVMIGGHAQYGDSNDALKLF--------------------VEMISEPY--------- 517
Query: 282 GIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD----FIQATIIHFYAACGR 337
G+APN I ++ AC A G QIH+ +++ Y+ F+ +I Y+ CG
Sbjct: 518 GVAPNAYTISCILMACAHLAAIRIGKQIHAYVLR--HHRYESSAYFVANCLIDMYSKCGD 575
Query: 338 INLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQN 397
++ AR F+ + SW +++ G+ +G +A +F+ M+K
Sbjct: 576 VDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRK---------------- 619
Query: 398 EQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG-RWAHEYVLNNSITLNDNL 456
AG P++IT + V A + G + +G + + +T
Sbjct: 620 ---------------AGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEH 664
Query: 457 SAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKR 516
A ID+ A+ G ++ A+ + T+V W A++ +H + L + L +
Sbjct: 665 YACAIDLLARSGRLDKAWRTVKDMPMEPTAVV-WVALLSACRVHSNVELAEHALNKLVEM 723
Query: 517 N 517
N
Sbjct: 724 N 724
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 90/424 (21%), Positives = 172/424 (40%), Gaps = 77/424 (18%)
Query: 231 FAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMI 290
+ G + A + ER+ V W +I +++ RL A+ + ML G P+ +
Sbjct: 106 YLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRPDHFTL 165
Query: 291 VDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQF----E 346
++ ACG ++ G H +I GF+ FI ++ Y+ CG + A + F +
Sbjct: 166 PHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQ 225
Query: 347 LGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALEL 406
GI D + SWN++++ +++ A LF+ M + ++ NE+ ++
Sbjct: 226 RGIDD-VISWNSIVSAHVKSSNAWTALDLFSKM--------TLIVHEKPTNERSDI---- 272
Query: 407 FHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAK 466
I++V++ A S + + + H + N + + A+ID YAK
Sbjct: 273 -------------ISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAK 319
Query: 467 CGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKL------ 520
CG + A +VF + + V WNA++ G + G+ +++ ++ K NI L
Sbjct: 320 CGLMENAVKVFNMMEFK--DVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWT 377
Query: 521 -----------------------------NSITFIGVLSTCCHAGLVDLG-ERYFKSMKS 550
N +T I VLS C G G E + S+K+
Sbjct: 378 AVIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKN 437
Query: 551 VY--------NVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKA-DVVIWGTLLAASR 601
+ DL Y ++D+ + + A + +P++ +VV W ++
Sbjct: 438 CLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHA 497
Query: 602 IHGN 605
+G+
Sbjct: 498 QYGD 501
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 115/268 (42%), Gaps = 11/268 (4%)
Query: 357 NALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVK 416
++A ++ G + A + + W+ +I + + + + A+ + M+ AG +
Sbjct: 100 TGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTR 159
Query: 417 PNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEV 476
P+ T+ V A + + G H + N N + A++ MY++CGS+ A +
Sbjct: 160 PDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMI 219
Query: 477 FYHIRDR-TTSVSPWNAIICGLAMHGDANLTLKIYSDL------EKRNIKLNSITFIGVL 529
F I R V WN+I+ +A L ++S + + N + + I+ + +L
Sbjct: 220 FDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNIL 279
Query: 530 STCCHAGLV-DLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKA 588
C V E + ++++ PD+ ++D + G +E+A +V M K
Sbjct: 280 PACGSLKAVPQTKEVHGNAIRN--GTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFK- 336
Query: 589 DVVIWGTLLAASRIHGNVEVGERAAKSL 616
DVV W ++A GN E K++
Sbjct: 337 DVVSWNAMVAGYSQSGNFEAAFELFKNM 364
>gi|168042957|ref|XP_001773953.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674797|gb|EDQ61301.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 905
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 205/691 (29%), Positives = 348/691 (50%), Gaps = 80/691 (11%)
Query: 17 LQNSDY---ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGL 73
+QN+ + ++ +S L C + + G++IHS I K+G + + +QNSL+++Y KCG
Sbjct: 119 MQNAGFIPNKITYISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGD 178
Query: 74 ISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDK------TPIKCCVSYTSMI 127
+ +A+ +F S D V+ N M+ Y + + + +F + +P K V+Y +++
Sbjct: 179 LPRARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDK--VTYINLL 236
Query: 128 MGFAQNDCWREALEVFR---------DMRI-LGVIPNEVTLASVISSSVHLGGIWECRML 177
F E + + D+R+ ++ V V S+ GI + ++
Sbjct: 237 DAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGIADRDVV 296
Query: 178 -----------HGLVI-------KLMIDGFVIISTNLLNMYCVCSS--LVEARSLF---- 213
HG + ++ DG + T L++ CS+ +EA L
Sbjct: 297 VYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHI 356
Query: 214 -DEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEAL 272
++ ++ N +++ +A+ G + ARELF +P +D++SW +I GY + E EA+
Sbjct: 357 SEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAM 416
Query: 273 TMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFY 332
+Y+ M +G+ P V + L+SAC + A+ +G IH I+++G
Sbjct: 417 RLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKS------------ 464
Query: 333 AACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMIS 392
H+A NAL+ + R G + +A+ +F Q RDV SW++MI+
Sbjct: 465 -----------------NGHLA--NALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIA 505
Query: 393 GYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITL 452
G+AQ+ A +LF M + ++P+ IT SV + L+ G+ H + + + L
Sbjct: 506 GHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQL 565
Query: 453 NDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSD 512
+ NL A+I+MY +CGS+ A VF+ ++ R V W A+I G A G+ ++++
Sbjct: 566 DVNLGNALINMYIRCGSLQDARNVFHSLQHR--DVMSWTAMIGGCADQGEDMKAIELFWQ 623
Query: 513 LEKRNIKL-NSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRA 571
++ + + TF +LS C HAGLV G + F SM+S Y V P ++HYGC+V LLGRA
Sbjct: 624 MQNEGFRPPDGSTFTSILSACNHAGLVLEGYQIFSSMESEYGVLPTIEHYGCLVGLLGRA 683
Query: 572 GQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLS 631
+ ++AE +I MP D +W TLL A RIHGN+ + E AA + L + +LLS
Sbjct: 684 RRFQEAETLINQMPFPPDAAVWETLLGACRIHGNIALAEHAANNALKLNARNPAVYILLS 743
Query: 632 NIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
N+YA AGRW+D IR+ M G+++ PG S
Sbjct: 744 NVYAAAGRWDDVAKIRRVMEGRGIRKEPGRS 774
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 141/604 (23%), Positives = 267/604 (44%), Gaps = 106/604 (17%)
Query: 9 VFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLY 68
V N+ + +D V+ L+ C+ + + ++IH+ + ++G+ + F+ N LIN+Y
Sbjct: 14 VSNTHQPRPTETD-RATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMY 72
Query: 69 AKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIM 128
KC +S+ D A +VF + P + +S+ S+I
Sbjct: 73 VKC------RSVLD-------------------------AHQVFKEMPRRDVISWNSLIS 101
Query: 129 GFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDG 188
+AQ ++A ++F +M+ G IPN++T S++++ + + +H +IK
Sbjct: 102 CYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENGKKIHSQIIKAGYQR 161
Query: 189 FVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIP 248
+ +LL+MY C L AR +F + R++VS+N ML +A+ V+
Sbjct: 162 DPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVK---------- 211
Query: 249 SKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQ 308
E L ++ M +GI+P+ V ++L+ A EG +
Sbjct: 212 ---------------------ECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKR 250
Query: 309 IHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGM 368
IH + V+ G + + ++ CG ++ A+ F+ GI D
Sbjct: 251 IHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFK-GIAD----------------- 292
Query: 369 IEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCA 428
RDV ++A+I+ AQ+ A E ++ M GV N T +S+ A
Sbjct: 293 -------------RDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNA 339
Query: 429 IASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVS 488
++S L+ G+ H ++ + + + + A+I MYA+CG + A E+FY + R +
Sbjct: 340 CSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKR--DLI 397
Query: 489 PWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSM 548
WNAII G A D +++Y ++ +K +TF+ +LS C ++ G+ + +
Sbjct: 398 SWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDI 457
Query: 549 KSVYNVEPDLKHYG----CMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHG 604
+ +K G ++++ R G L +A+ V + DV+ W +++A HG
Sbjct: 458 -----LRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQAR-DVISWNSMIAGHAQHG 511
Query: 605 NVEV 608
+ E
Sbjct: 512 SYET 515
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 144/322 (44%), Gaps = 36/322 (11%)
Query: 291 VDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIK 350
V L+ C R E +IH+ +V+AG F+ +I+ Y C +
Sbjct: 31 VALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSV------------ 78
Query: 351 DHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGM 410
DA Q+F M +RDV SW+++IS YAQ A +LF M
Sbjct: 79 -------------------LDAHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEM 119
Query: 411 VDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSI 470
+AG PN+IT +S+ A S L+ G+ H ++ + + +++ MY KCG +
Sbjct: 120 QNAGFIPNKITYISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDL 179
Query: 471 NTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLS 530
A +VF I R V +N ++ A L ++ + I + +T+I +L
Sbjct: 180 PRARQVFAGISPR--DVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLD 237
Query: 531 TCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADV 590
++D G+R K + + D++ +V + R G ++ A++ + + + DV
Sbjct: 238 AFTTPSMLDEGKRIHK-LTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGIADR-DV 295
Query: 591 VIWGTLLAASRIHG-NVEVGER 611
V++ L+AA HG NVE E+
Sbjct: 296 VVYNALIAALAQHGHNVEAFEQ 317
>gi|297804022|ref|XP_002869895.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315731|gb|EFH46154.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 853
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 186/634 (29%), Positives = 323/634 (50%), Gaps = 96/634 (15%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
L C++ + + G Q+H L+ SGL+ I+NSL+++Y+KCG
Sbjct: 242 LSVCASKLLIDLGVQLHGLVVVSGLDFEGSIKNSLLSMYSKCG----------------- 284
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
R +DA ++F V++ MI G+ Q+ E+L F +M
Sbjct: 285 --------------RFDDAIKLFRMMSRADTVTWNCMISGYVQSGLMEESLIFFYEMISS 330
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
GV+P+ +T +S++ S + CR +H +++ I + +++ L++ Y C
Sbjct: 331 GVLPDAITFSSLLPSVSKFENLEYCRQIHCYIMRHSISLDIFLTSALIDAYFKCRG---- 386
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLS 269
V +A+++F + S DVV + MI GYL
Sbjct: 387 ---------------------------VSMAQKIFSQCNSVDVVVFTAMISGYLHNGLNI 419
Query: 270 EALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATII 329
+AL M+R ++ I+PN++ +V ++ G +A G ++H I+K GFD I +I
Sbjct: 420 DALEMFRWLVKVKISPNEITLVSILPVIGGLLALKLGRELHGFIIKKGFDNRCNIGCAVI 479
Query: 330 HFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSA 389
YA CGR+NLA ++F + KRD+ SW++
Sbjct: 480 DMYAKCGRMNLAY-------------------------------EIFGRLSKRDIVSWNS 508
Query: 390 MISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNS 449
MI+ AQ++ P+ A+++F M +G+ + +++ + A A+ + G+ H +++ +S
Sbjct: 509 MITRCAQSDNPSAAIDIFRQMGVSGICFDCVSISAALSACANLPSESFGKAIHGFMIKHS 568
Query: 450 ITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKI 509
+ L+ + +IDMYAKCG++ A VF ++++ ++ WN+II HG +L +
Sbjct: 569 LALDVYSESTLIDMYAKCGNLKAAMNVFDTMKEK--NIVSWNSIIAAYGNHGKLKDSLCL 626
Query: 510 YSDL-EKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLL 568
+ ++ EK + + ITF+ ++S CCH G VD G R+F+SM Y ++P +HY C+VDL
Sbjct: 627 FHEMVEKSGNRPDQITFLEIISLCCHVGDVDEGVRFFRSMTQDYGIQPQQEHYACVVDLF 686
Query: 569 GRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRV 628
GRAG+L +A E ++SMP D +WGTLL ASR+H NVE+ + A+ L L P + V
Sbjct: 687 GRAGRLSEAYETVKSMPFPPDAGVWGTLLGASRLHKNVELAKVASSRLMDLDPWNSGYYV 746
Query: 629 LLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
L+SN +A+ G WE +R M++ ++++PG+S
Sbjct: 747 LISNAHANTGEWESVTKVRSLMKEREVQKIPGYS 780
Score = 162 bits (409), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 136/571 (23%), Positives = 248/571 (43%), Gaps = 99/571 (17%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
L+ CS + QG+Q+H+ + + + +++ ++ +YA CG S MF
Sbjct: 38 LQDCSNLTLLRQGKQVHAFVIVNRISGDSYTDERILGMYAMCGSFSNCGKMF-------- 89
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
Y + RL+ R + S+I F + +AL + M
Sbjct: 90 ---------YRLDSRLSSIRP------------WNSIISSFVRMGLLNQALAFYFKMLCF 128
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
GV P+ T ++ + V L L V L +D N + V SSL++A
Sbjct: 129 GVSPDVSTFPCLVKACVALKNFKGIEFLSDTVSSLGMD---------CNEF-VASSLIKA 178
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLS 269
+ + G +++A +LF+R+ KD V W M++GY +
Sbjct: 179 ---------------------YLEYGKIDVAGKLFDRVLQKDCVIWNVMLNGYAKCGASD 217
Query: 270 EALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATII 329
+ + M D I+PN V ++S C + G+Q+H ++V +G D I+ +++
Sbjct: 218 SVIKGFSLMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGLDFEGSIKNSLL 277
Query: 330 HFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSA 389
Y+ CGR +DA +LF M + D +W+
Sbjct: 278 SMYSKCGRF-------------------------------DDAIKLFRMMSRADTVTWNC 306
Query: 390 MISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNS 449
MISGY Q+ +L F+ M+ +GV P+ IT S+ +++ L+ R H Y++ +S
Sbjct: 307 MISGYVQSGLMEESLIFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCRQIHCYIMRHS 366
Query: 450 ITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKI 509
I+L+ L++A+ID Y KC ++ A ++F + V + A+I G +G L++
Sbjct: 367 ISLDIFLTSALIDAYFKCRGVSMAQKIFSQC--NSVDVVVFTAMISGYLHNGLNIDALEM 424
Query: 510 YSDLEKRNIKLNSITFIGVLSTCCHAGLVDLG-ERYFKSMKSVYNVEPDLKHYGC-MVDL 567
+ L K I N IT + +L + LG E + +K ++ ++ GC ++D+
Sbjct: 425 FRWLVKVKISPNEITLVSILPVIGGLLALKLGRELHGFIIKKGFDNRCNI---GCAVIDM 481
Query: 568 LGRAGQLEDAEEVIRSMPMKADVVIWGTLLA 598
+ G++ A E+ + K D+V W +++
Sbjct: 482 YAKCGRMNLAYEIFGRLS-KRDIVSWNSMIT 511
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 100/387 (25%), Positives = 174/387 (44%), Gaps = 58/387 (14%)
Query: 20 SDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKS 79
S E+ LVS L +A+ G+++H I K G ++ I ++I++YAKCG
Sbjct: 434 SPNEITLVSILPVIGGLLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCG------- 486
Query: 80 MFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREA 139
R+N A E+F + + VS+ SMI AQ+D A
Sbjct: 487 ------------------------RMNLAYEIFGRLSKRDIVSWNSMITRCAQSDNPSAA 522
Query: 140 LEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNM 199
+++FR M + G+ + V++++ +S+ +L + +HG +IK + V + L++M
Sbjct: 523 IDIFRQMGVSGICFDCVSISAALSACANLPSESFGKAIHGFMIKHSLALDVYSESTLIDM 582
Query: 200 YCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSK-----DVVS 254
Y C +L A ++FD MKE+NIVSWN ++ + G ++ + LF + K D ++
Sbjct: 583 YAKCGNLKAAMNVFDTMKEKNIVSWNSIIAAYGNHGKLKDSLCLFHEMVEKSGNRPDQIT 642
Query: 255 WGTMIDGYLQVERLSEALTMYRAMLCD-GIAPND---VMIVDLISACGRAMAFGEGLQIH 310
+ +I V + E + +R+M D GI P +VDL GR E ++
Sbjct: 643 FLEIISLCCHVGDVDEGVRFFRSMTQDYGIQPQQEHYACVVDLFGRAGRLSEAYETVKSM 702
Query: 311 SIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRN---- 366
AG + A+ +H ++ +RL + WN+ I N
Sbjct: 703 PFPPDAGV-WGTLLGASRLHKNVELAKVASSRLM-------DLDPWNSGYYVLISNAHAN 754
Query: 367 -GMIEDARQLFNNMQKRDV-----YSW 387
G E ++ + M++R+V YSW
Sbjct: 755 TGEWESVTKVRSLMKEREVQKIPGYSW 781
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/318 (22%), Positives = 139/318 (43%), Gaps = 39/318 (12%)
Query: 293 LISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRI-NLARLQFELGIK- 350
L+ C +G Q+H+ ++ + I+ YA CG N ++ + L +
Sbjct: 37 LLQDCSNLTLLRQGKQVHAFVIVNRISGDSYTDERILGMYAMCGSFSNCGKMFYRLDSRL 96
Query: 351 DHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGM 410
I WN++I+ F+R G++ N AL + M
Sbjct: 97 SSIRPWNSIISSFVRMGLL-------------------------------NQALAFYFKM 125
Query: 411 VDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSI 470
+ GV P+ T + A + K + + V + + N+ +++++I Y + G I
Sbjct: 126 LCFGVSPDVSTFPCLVKACVALKNFKGIEFLSDTVSSLGMDCNEFVASSLIKAYLEYGKI 185
Query: 471 NTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLS 530
+ A ++F + + + WN ++ G A G ++ +K +S + I N++TF VLS
Sbjct: 186 DVAGKLFDRVLQKDCVI--WNVMLNGYAKCGASDSVIKGFSLMRMDQISPNAVTFDCVLS 243
Query: 531 TCCHAGLVDLG-ERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKAD 589
C L+DLG + + + S + E +K+ ++ + + G+ +DA ++ R M +AD
Sbjct: 244 VCASKLLIDLGVQLHGLVVVSGLDFEGSIKN--SLLSMYSKCGRFDDAIKLFRMMS-RAD 300
Query: 590 VVIWGTLLAASRIHGNVE 607
V W +++ G +E
Sbjct: 301 TVTWNCMISGYVQSGLME 318
>gi|147798551|emb|CAN72187.1| hypothetical protein VITISV_012899 [Vitis vinifera]
Length = 690
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 196/546 (35%), Positives = 291/546 (53%), Gaps = 55/546 (10%)
Query: 123 YTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVI 182
+ ++I F+ + EA +F M GV ++ + + V+ + LG I E +HGL+
Sbjct: 146 WNAIIKSFSHGEDPXEAFXIFNLMLENGVCVDKFSFSLVLKACSRLGLIKEGMQIHGLLG 205
Query: 183 KLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARE 242
+ I V + L+ +Y C L AR LFD M R+ VS+N M++G+ K G+V+ ARE
Sbjct: 206 XMEIGSDVFLQNCLMCLYLRCGCLGIARQLFDRMMXRDSVSFNSMIDGYVKHGMVKSARE 265
Query: 243 LFERIP--SKDVVSWGTMIDGYLQVER-LSEALTMYRAMLCDGIAPNDVMIVDLISACGR 299
LF+ +P K+++SW +MI GY + E L A ++ M P DLIS
Sbjct: 266 LFDVMPMEQKNLISWNSMISGYARSEEGLRVAWELFEEM------PKR----DLIS---- 311
Query: 300 AMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNAL 359
++I CG++ A F K + SW +
Sbjct: 312 -------------------------WNSMIDGCVKCGKMENAHHLFNXMPKRDVVSWANM 346
Query: 360 IAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAG-VKPN 418
+ G+ + G I+ AR LF+ M +RDV S +AM++GY QN AL FH M+ + P
Sbjct: 347 VDGYAKLGEIDIARGLFDEMPERDVISCNAMMAGYVQNGXLMEALXFFHDMLSXKELFPX 406
Query: 419 EITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFY 478
T++ AIA G EG H Y+ +N +L++ L A+IDMYAKCGSI+ A
Sbjct: 407 NATLLITLSAIAQLGHFDEGVALHCYIEDNGFSLSEKLGXALIDMYAKCGSIDNAL---- 462
Query: 479 HIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLV 538
+ WNAIJ GLA+HG + +++ ++EK +K B ITFIGVL+ C HAGLV
Sbjct: 463 --------IDHWNAIJXGLAIHGLGEVAFELFMEMEKLFVKPBDITFIGVLNACNHAGLV 514
Query: 539 DLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLA 598
G F M+ V+ VEP L+HYGCMVD+LGRAG +E+ ++ + MP++ + V+W TLL+
Sbjct: 515 KEGLMXFXLMRXVHKVEPKLQHYGCMVDILGRAGHVEEXKKFVEKMPIEPNDVVWRTLLS 574
Query: 599 ASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRL 658
A R H N +GE AK L + + S VLLSNIYA G W D + IR M+ +K++
Sbjct: 575 ACRNHENFTIGEPVAKHLISVDSYNPSSYVLLSNIYAXFGMWNDVYRIRMMMKQRDLKKI 634
Query: 659 PGFSGV 664
PG S +
Sbjct: 635 PGCSQI 640
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 128/414 (30%), Positives = 198/414 (47%), Gaps = 86/414 (20%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
L+ CS + +G QIH L+ + S+ F+QN L+ LY +CG + A+ +FD D
Sbjct: 185 LKACSRLGLIKEGMQIHGLLGXMEIGSDVFLQNCLMCLYLRCGCLGIARQLFDRMMXRDS 244
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPI--KCCVSYTSMIMGFAQN-DCWREALEVFRDM 146
V+ N MI GY+++ + ARE+FD P+ K +S+ SMI G+A++ + R A E+F +M
Sbjct: 245 VSFNSMIDGYVKHGMVKSARELFDVMPMEQKNLISWNSMISGYARSEEGLRVAWELFEEM 304
Query: 147 RILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV-CSS 205
+I W MIDG CV C
Sbjct: 305 PKRDLIS------------------WNS----------MIDG------------CVKCGK 324
Query: 206 LVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQV 265
+ A LF+ M +R++VSW M++G+AK G +++AR LF+ +P +DV+S M+ GY+Q
Sbjct: 325 MENAHHLFNXMPKRDVVSWANMVDGYAKLGEIDIARGLFDEMPERDVISCNAMMAGYVQN 384
Query: 266 ERLSEALTMYRAMLC-DGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFI 324
L EAL + ML + P + ++ +SA + F EG+ +H I GF + +
Sbjct: 385 GXLMEALXFFHDMLSXKELFPXNATLLITLSAIAQLGHFDEGVALHCYIEDNGFSLSEKL 444
Query: 325 QATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDV 384
+I YA CG I+ A + DH WNA+J G +G+ E A +LF M+K
Sbjct: 445 GXALIDMYAKCGSIDNALI-------DH---WNAIJXGLAIHGLGEVAFELFMEMEK--- 491
Query: 385 YSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG 438
LF VKPB+IT + V A +G +KEG
Sbjct: 492 ---------------------LF-------VKPBDITFIGVLNACNHAGLVKEG 517
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 124/286 (43%), Gaps = 48/286 (16%)
Query: 26 LVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCS 85
L+S S + +G ++ +F+ + + NS+I+ KCG + A +F+
Sbjct: 277 LISWNSMISGYARSEEGLRVAWELFEEMPKRDLISWNSMIDGCVKCGKMENAHHLFNXMP 336
Query: 86 TLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRD 145
D V+ M+ GY + ++ AR +FD+ P + +S +M+ G+ QN EAL F D
Sbjct: 337 KRDVVSWANMVDGYAKLGEIDIARGLFDEMPERDVISCNAMMAGYVQNGXLMEALXFFHD 396
Query: 146 M-RILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVI---ISTNLLNMYC 201
M + P TL +S+ LG E LH + +GF + + L++MY
Sbjct: 397 MLSXKELFPXNATLLITLSAIAQLGHFDEGVALHCYIED---NGFSLSEKLGXALIDMYA 453
Query: 202 VCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDG 261
C S+ A L D WN +J G A GL E+A ELF
Sbjct: 454 KCGSIDNA--LIDH--------WNAIJXGLAIHGLGEVAFELF----------------- 486
Query: 262 YLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGL 307
+++E+L + PBD+ + +++AC A EGL
Sbjct: 487 -MEMEKLF-------------VKPBDITFIGVLNACNHAGLVKEGL 518
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 119/253 (47%), Gaps = 24/253 (9%)
Query: 368 MIEDARQLF-------NNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEI 420
++E AR LF + ++ + + W+A+I ++ E P A +F+ M++ GV ++
Sbjct: 120 LVEFARYLFMSRHFGRKHRKQDNPFLWNAIIKSFSHGEDPXEAFXIFNLMLENGVCVDKF 179
Query: 421 TMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHI 480
+ V A + G +KEG H + I + L ++ +Y +CG + A ++F +
Sbjct: 180 SFSLVLKACSRLGLIKEGMQIHGLLGXMEIGSDVFLQNCLMCLYLRCGCLGIARQLFDRM 239
Query: 481 RDRTTSVSPWNAIICGLAMHGDANLTLKIYS--DLEKRNIKLNSITFIGVLSTCCHAGLV 538
R SVS +N++I G HG +++ +E++N+ I++ ++S +
Sbjct: 240 MXR-DSVS-FNSMIDGYVKHGMVKSARELFDVMPMEQKNL----ISWNSMISGYARS--- 290
Query: 539 DLGERYFKSMKSVYNVEP--DLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTL 596
E + ++ P DL + M+D + G++E+A + MP K DVV W +
Sbjct: 291 ---EEGLRVAWELFEEMPKRDLISWNSMIDGCVKCGKMENAHHLFNXMP-KRDVVSWANM 346
Query: 597 LAASRIHGNVEVG 609
+ G +++
Sbjct: 347 VDGYAKLGEIDIA 359
>gi|356553601|ref|XP_003545143.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic-like [Glycine max]
Length = 534
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 168/433 (38%), Positives = 258/433 (59%), Gaps = 2/433 (0%)
Query: 232 AKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIV 291
+ +G + A LF IPS ++ W T+I G+ + A++++ MLC + P +
Sbjct: 69 SSSGDINYAYLLFTTIPSPNLYCWNTIIRGFSRSSTPHLAISLFVDMLCSSVLPQRLTYP 128
Query: 292 DLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKD 351
+ A + A +G Q+H +VK G + FIQ TII+ YA G ++ AR F+ +
Sbjct: 129 SVFKAYAQLGAGYDGAQLHGRVVKLGLEKDQFIQNTIIYMYANSGLLSEARRVFDELVDL 188
Query: 352 HIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMV 411
+ + N++I G + G ++ +R+LF+NM R +W++MISGY +N++ ALELF M
Sbjct: 189 DVVACNSMIMGLAKCGEVDKSRRLFDNMPTRTRVTWNSMISGYVRNKRLMEALELFRKMQ 248
Query: 412 DAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSIN 471
V+P+E TMVS+ A A G LK G W H+YV LN + AIIDMY KCG I
Sbjct: 249 GERVEPSEFTMVSLLSACAHLGALKHGEWVHDYVKRGHFELNVIVLTAIIDMYCKCGVIV 308
Query: 472 TAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLST 531
A EVF T +S WN+II GLA++G ++ +S LE ++K + ++FIGVL+
Sbjct: 309 KAIEVFE--ASPTRGLSCWNSIIIGLALNGYERKAIEYFSKLEASDLKPDHVSFIGVLTA 366
Query: 532 CCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVV 591
C + G V YF M + Y +EP +KHY CMV++LG+A LE+AE++I+ MP+KAD +
Sbjct: 367 CKYIGAVGKARDYFSLMMNKYEIEPSIKHYTCMVEVLGQAALLEEAEQLIKGMPLKADFI 426
Query: 592 IWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMR 651
IWG+LL++ R HGNVE+ +RAA+ + L PS +L+SN+ A + ++E+A R MR
Sbjct: 427 IWGSLLSSCRKHGNVEIAKRAAQRVCELNPSDASGYLLMSNVQAASNQFEEAMEQRILMR 486
Query: 652 DCGMKRLPGFSGV 664
+ ++ PG S +
Sbjct: 487 ERLAEKEPGCSSI 499
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 124/511 (24%), Positives = 222/511 (43%), Gaps = 81/511 (15%)
Query: 105 LNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISS 164
+N A +F P + ++I GF+++ A+ +F DM V+P +T SV +
Sbjct: 74 INYAYLLFTTIPSPNLYCWNTIIRGFSRSSTPHLAISLFVDMLCSSVLPQRLTYPSVFKA 133
Query: 165 SVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSW 224
LG ++ LHG V+KL ++ I ++ MY L EAR +FDE+ + ++V+
Sbjct: 134 YAQLGAGYDGAQLHGRVVKLGLEKDQFIQNTIIYMYANSGLLSEARRVFDELVDLDVVAC 193
Query: 225 NVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIA 284
N M+ G AK G V+ +R LF+ +P++ V+W +MI GY++ +RL EAL ++R M + +
Sbjct: 194 NSMIMGLAKCGEVDKSRRLFDNMPTRTRVTWNSMISGYVRNKRLMEALELFRKMQGERVE 253
Query: 285 PNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQ 344
P++ +V L+SAC A G +H + + F+ + II Y CG I A
Sbjct: 254 PSEFTMVSLLSACAHLGALKHGEWVHDYVKRGHFELNVIVLTAIIDMYCKCGVIVKAIEV 313
Query: 345 FELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMAL 404
FE ++ WN++I G NG A + F+ ++ D
Sbjct: 314 FEASPTRGLSCWNSIIIGLALNGYERKAIEYFSKLEASD--------------------- 352
Query: 405 ELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMY 464
+KP+ ++ + V A G + + R ++N
Sbjct: 353 ----------LKPDHVSFIGVLTACKYIGAVGKARDYFSLMMNK---------------- 386
Query: 465 AKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSIT 524
+E+ I+ T C + + G A L + ++ +K + I
Sbjct: 387 ---------YEIEPSIKHYT----------CMVEVLGQAALLEEAEQLIKGMPLKADFII 427
Query: 525 FIGVLSTCCHAGLVDLGERYFKSMKSVYNVEP-DLKHYGCMVDLLGRAGQLEDA------ 577
+ +LS+C G V++ +R + + V + P D Y M ++ + Q E+A
Sbjct: 428 WGSLLSSCRKHGNVEIAKR---AAQRVCELNPSDASGYLLMSNVQAASNQFEEAMEQRIL 484
Query: 578 --EEVIRSMPMKADVVIWGTL---LAASRIH 603
E + P + + ++G + LA R+H
Sbjct: 485 MRERLAEKEPGCSSIELYGEVHEFLAGGRLH 515
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 103/362 (28%), Positives = 174/362 (48%), Gaps = 49/362 (13%)
Query: 26 LVSALRYCSAHIAVSQ------GQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKS 79
L L Y S A +Q G Q+H + K GLE + FIQN++I +YA GL+S+A+
Sbjct: 121 LPQRLTYPSVFKAYAQLGAGYDGAQLHGRVVKLGLEKDQFIQNTIIYMYANSGLLSEARR 180
Query: 80 MFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREA 139
+FD LD VACN MI G + ++ +R +FD P + V++ SMI G+ +N EA
Sbjct: 181 VFDELVDLDVVACNSMIMGLAKCGEVDKSRRLFDNMPTRTRVTWNSMISGYVRNKRLMEA 240
Query: 140 LEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNM 199
LE+FR M+ V P+E T+ S++S+ HLG + +H V + + VI+ T +++M
Sbjct: 241 LELFRKMQGERVEPSEFTMVSLLSACAHLGALKHGEWVHDYVKRGHFELNVIVLTAIIDM 300
Query: 200 YCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMI 259
YC C +V+A +F+ R + WN ++ G A G A E F ++ + D
Sbjct: 301 YCKCGVIVKAIEVFEASPTRGLSCWNSIIIGLALNGYERKAIEYFSKLEASD-------- 352
Query: 260 DGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFD 319
+ P+ V + +++AC A G+ S+++
Sbjct: 353 -----------------------LKPDHVSFIGVLTACKYIGAVGKARDYFSLMMNK--- 386
Query: 320 CYDFIQATIIHFYAACGRINLARLQFE-------LGIKDHIASWNALIAGFIRNGMIEDA 372
Y+ I+ +I H+ + A L E + +K W +L++ ++G +E A
Sbjct: 387 -YE-IEPSIKHYTCMVEVLGQAALLEEAEQLIKGMPLKADFIIWGSLLSSCRKHGNVEIA 444
Query: 373 RQ 374
++
Sbjct: 445 KR 446
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 102/227 (44%), Gaps = 33/227 (14%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E +VS L C+ A+ G+ +H + + E N + ++I++Y KCG+I +A
Sbjct: 256 EFTMVSLLSACAHLGALKHGEWVHDYVKRGHFELNVIVLTAIIDMYCKCGVIVKAI---- 311
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
EVF+ +P + + S+I+G A N R+A+E
Sbjct: 312 ---------------------------EVFEASPTRGLSCWNSIIIGLALNGYERKAIEY 344
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVI-KLMIDGFVIISTNLLNMYC 201
F + + P+ V+ V+++ ++G + + R L++ K I+ + T ++ +
Sbjct: 345 FSKLEASDLKPDHVSFIGVLTACKYIGAVGKARDYFSLMMNKYEIEPSIKHYTCMVEVLG 404
Query: 202 VCSSLVEARSLFDEMK-ERNIVSWNVMLNGFAKAGLVELARELFERI 247
+ L EA L M + + + W +L+ K G VE+A+ +R+
Sbjct: 405 QAALLEEAEQLIKGMPLKADFIIWGSLLSSCRKHGNVEIAKRAAQRV 451
>gi|449439005|ref|XP_004137278.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
gi|449476583|ref|XP_004154777.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
Length = 816
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 206/668 (30%), Positives = 328/668 (49%), Gaps = 105/668 (15%)
Query: 3 LDHFHSV---FNS--QKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESN 57
+ HFH+ FN + LQ+ Y V +R C + G+++H L+ K G E +
Sbjct: 119 IGHFHAAVDCFNEFLSTSFLQSDHYTFPPV--IRACGN---LDDGRKVHCLVLKLGFECD 173
Query: 58 TFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPI 117
+I S I+ Y++ G +S +ACN+ FD I
Sbjct: 174 VYIAASFIHFYSRFGFVS--------------LACNL-----------------FDNMMI 202
Query: 118 KCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRML 177
+ ++ +MI GF N EALEVF +MR V + VT++S++ V L I ++
Sbjct: 203 RDIGTWNAMISGFYLNGKVAEALEVFDEMRFKSVSMDSVTISSLLPICVQLDDIISGVLI 262
Query: 178 HGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLV 237
H IKL ++ + + L+NMY AK G +
Sbjct: 263 HVYAIKLGLEFDLFVCNALINMY-------------------------------AKFGEL 291
Query: 238 ELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISAC 297
A +F ++ +D+VSW +++ + Q ++ AL +Y M G+ P+ + +V L S
Sbjct: 292 RSAETIFNQMKVRDIVSWNSLLAAFEQNKKPVIALGVYNKMHSIGVVPDLLTLVSLASVA 351
Query: 298 GRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWN 357
F IH + + + +D IA N
Sbjct: 352 AELGNFLSSRSIHGFVTRRCWFLHD------------------------------IALGN 381
Query: 358 ALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGM-VDAGVK 416
A+I + + G I+ AR++F + +DV SW+++I+GY+QN N A++++ M +G
Sbjct: 382 AIIDMYAKLGFIDSARKVFEGLPVKDVISWNSLITGYSQNGLANEAIDVYSSMRYYSGAV 441
Query: 417 PNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEV 476
PN+ T VS+ A + G LK+G AH ++ N + + +S ++DMY KCG + A +
Sbjct: 442 PNQGTWVSILTAHSQLGALKQGMKAHGQLIKNFLYFDIFVSTCLVDMYGKCGKLADALSL 501
Query: 477 FYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAG 536
FY + ++ SVS WNAII +HG +K++ +++ +K + ITF+ +LS C H+G
Sbjct: 502 FYEVPHQS-SVS-WNAIISCHGLHGYGLKAVKLFKEMQSEGVKPDHITFVSLLSACSHSG 559
Query: 537 LVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTL 596
LVD G+ F+ M+ Y + P LKHYGCMVDL GRAG LE A +++MP++ DV +WG L
Sbjct: 560 LVDEGQWCFQLMQETYGIRPSLKHYGCMVDLFGRAGHLEKAFNFVKNMPVRPDVSVWGAL 619
Query: 597 LAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMK 656
L A RIH NVE+ + L ++ + VLLSNIYA G WE +R RD G+K
Sbjct: 620 LGACRIHENVELVRTVSDHLLKVESENVGYYVLLSNIYAKLGHWEGVDEVRSLARDRGLK 679
Query: 657 RLPGFSGV 664
+ PG+S +
Sbjct: 680 KTPGWSSI 687
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 100/423 (23%), Positives = 191/423 (45%), Gaps = 54/423 (12%)
Query: 192 ISTNLLNMYCVCSSLVEARS--LFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPS 249
I N + +YC L + L K ++I ++N +A G + AR F++I +
Sbjct: 44 IDFNRIFLYCTKVHLAKQLHALLVVSGKTQSIFLSAKLINRYAFLGDIPHARLTFDQIQT 103
Query: 250 KDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPND-VMIVDLISACGRAMAFGEGLQ 308
KDV +W +MI Y ++ A+ + L +D +I ACG +G +
Sbjct: 104 KDVYTWNSMISAYARIGHFHAAVDCFNEFLSTSFLQSDHYTFPPVIRACGN---LDDGRK 160
Query: 309 IHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGM 368
+H +++K GF+C +I A+ IHFY+ G ++LA F+ + I +WNA+I+GF NG
Sbjct: 161 VHCLVLKLGFECDVYIAASFIHFYSRFGFVSLACNLFDNMMIRDIGTWNAMISGFYLNGK 220
Query: 369 IEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCA 428
+ +A ++F+ M+ + V S IS ++ V+ ++I
Sbjct: 221 VAEALEVFDEMRFKSVSMDSVTIS----------------SLLPICVQLDDII------- 257
Query: 429 IASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVS 488
SG L H Y + + + + A+I+MYAK G + +A +F ++ R +
Sbjct: 258 ---SGVL-----IHVYAIKLGLEFDLFVCNALINMYAKFGELRSAETIFNQMKVR--DIV 307
Query: 489 PWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSM 548
WN+++ + + L +Y+ + + + +T + + S G F S
Sbjct: 308 SWNSLLAAFEQNKKPVIALGVYNKMHSIGVVPDLLTLVSLASVAAELG-------NFLSS 360
Query: 549 KSVYNVEP-------DLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASR 601
+S++ D+ ++D+ + G ++ A +V +P+K DV+ W +L+
Sbjct: 361 RSIHGFVTRRCWFLHDIALGNAIIDMYAKLGFIDSARKVFEGLPVK-DVISWNSLITGYS 419
Query: 602 IHG 604
+G
Sbjct: 420 QNG 422
>gi|224124674|ref|XP_002330082.1| predicted protein [Populus trichocarpa]
gi|222871507|gb|EEF08638.1| predicted protein [Populus trichocarpa]
Length = 665
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 177/465 (38%), Positives = 262/465 (56%), Gaps = 38/465 (8%)
Query: 237 VELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISA 296
+ A ++FE +P+ +V + +I G LQ +A+ Y M+ PN L A
Sbjct: 80 LNFALKVFEYVPNPNVFVFNIIIKGCLQNNEPCKAICCYYKMMIAHARPNKFTYPTLFKA 139
Query: 297 CGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASW 356
C A A EG+Q+H+ ++K G I++ I Y + G + AR + +
Sbjct: 140 CTAAEAAEEGVQVHAHVIKQGLSGDVHIRSAGIQMYGSFGEVEGARRMLGEDGNSDVICF 199
Query: 357 NALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQ-----------NEQPNM--- 402
NA+I G+++ G +E A++LF +M+ ++V SW+ M+SG A+ NE
Sbjct: 200 NAMIDGYLKCGEVEAAKELFWSMEDKNVGSWNVMVSGMAKCGMIEEARELFNEMKEKNEI 259
Query: 403 -----------------ALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYV 445
ALE+F+ M ++P + + SV A A+ G L +GRW H YV
Sbjct: 260 SWSAMIDGYIKGGYYKEALEVFNVMQREEIRPRKFVLSSVLAACANLGALDQGRWIHAYV 319
Query: 446 LNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANL 505
NNS + + L A++DMYAKCG ++ A++VF + + V WNA+ICGL MHG A
Sbjct: 320 NNNSNSFDAVLGTALVDMYAKCGRLDMAWDVFEKMEKK--EVFTWNAMICGLGMHGRAED 377
Query: 506 TLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMV 565
++++ ++K+ + N IT +GVLS C H+G+VD G R F SM+ VY +EP ++HYGC+V
Sbjct: 378 AIELFFKMQKQKFRPNGITLLGVLSACAHSGMVDEGLRIFNSMEEVYGIEPGMEHYGCVV 437
Query: 566 DLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGP 625
DLLGRAG L +AEEV+ SMPM+ +WG LL A R HG+VE+GER K L L+P +
Sbjct: 438 DLLGRAGLLGEAEEVMYSMPMEPSAAVWGALLGACRKHGDVELGERVGKILLELEPQNSG 497
Query: 626 SRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPG-----FSGVV 665
LLSNIYA AGRW+D ++RK M++ G+K G F GVV
Sbjct: 498 RYALLSNIYARAGRWDDVANVRKLMKERGVKTSTGISMIDFDGVV 542
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 133/511 (26%), Positives = 216/511 (42%), Gaps = 98/511 (19%)
Query: 43 QQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRN 102
+Q+H++ ++G + ++ +L+ YA +P N
Sbjct: 47 KQVHAVALRTGHFQDHYVSGTLVKCYA------------------NPHFSN--------- 79
Query: 103 DRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVI 162
LN A +VF+ P + +I G QN+ +A+ + M I PN+ T ++
Sbjct: 80 --LNFALKVFEYVPNPNVFVFNIIIKGCLQNNEPCKAICCYYKMMIAHARPNKFTYPTLF 137
Query: 163 SSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMY---------------------- 200
+ E +H VIK + G V I + + MY
Sbjct: 138 KACTAAEAAEEGVQVHAHVIKQGLSGDVHIRSAGIQMYGSFGEVEGARRMLGEDGNSDVI 197
Query: 201 CV---------CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKD 251
C C + A+ LF M+++N+ SWNVM++G AK G++E ARELF + K+
Sbjct: 198 CFNAMIDGYLKCGEVEAAKELFWSMEDKNVGSWNVMVSGMAKCGMIEEARELFNEMKEKN 257
Query: 252 VVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHS 311
+SW MIDGY++ EAL ++ M + I P ++ +++AC A +G IH+
Sbjct: 258 EISWSAMIDGYIKGGYYKEALEVFNVMQREEIRPRKFVLSSVLAACANLGALDQGRWIHA 317
Query: 312 IIVKAGFDCYDFIQAT-IIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIE 370
V + +D + T ++ YA CGR+++A FE K + +WNA+I G +G E
Sbjct: 318 -YVNNNSNSFDAVLGTALVDMYAKCGRLDMAWDVFEKMEKKEVFTWNAMICGLGMHGRAE 376
Query: 371 DARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIA 430
DA +LF MQK+ +PN IT++ V A A
Sbjct: 377 DAIELFFKMQKQK-------------------------------FRPNGITLLGVLSACA 405
Query: 431 SSGTLKEG-RWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSP 489
SG + EG R + I ++D+ + G + A EV Y + S +
Sbjct: 406 HSGMVDEGLRIFNSMEEVYGIEPGMEHYGCVVDLLGRAGLLGEAEEVMYSM-PMEPSAAV 464
Query: 490 WNAIICGLAMHGDANL---TLKIYSDLEKRN 517
W A++ HGD L KI +LE +N
Sbjct: 465 WGALLGACRKHGDVELGERVGKILLELEPQN 495
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/378 (23%), Positives = 169/378 (44%), Gaps = 72/378 (19%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQ---------------------------- 61
+ C+A A +G Q+H+ + K GL + I+
Sbjct: 137 FKACTAAEAAEEGVQVHAHVIKQGLSGDVHIRSAGIQMYGSFGEVEGARRMLGEDGNSDV 196
Query: 62 ---NSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIK 118
N++I+ Y KCG + AK +F S + + N+M+SG + + +ARE+F++ K
Sbjct: 197 ICFNAMIDGYLKCGEVEAAKELFWSMEDKNVGSWNVMVSGMAKCGMIEEARELFNEMKEK 256
Query: 119 CCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLH 178
+S+++MI G+ + ++EALEVF M+ + P + L+SV+++ +LG + + R +H
Sbjct: 257 NEISWSAMIDGYIKGGYYKEALEVFNVMQREEIRPRKFVLSSVLAACANLGALDQGRWIH 316
Query: 179 GLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVE 238
V ++ T L++MY C L A +F++M+++ + +WN M+ G G E
Sbjct: 317 AYVNNNSNSFDAVLGTALVDMYAKCGRLDMAWDVFEKMEKKEVFTWNAMICGLGMHGRAE 376
Query: 239 LARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACG 298
A ELF ++ + PN + ++ ++SAC
Sbjct: 377 DAIELFFKMQKQK-------------------------------FRPNGITLLGVLSACA 405
Query: 299 RAMAFGEGLQIHSII-----VKAGFDCYDFIQATIIHFYAACGRINLA-RLQFELGIKDH 352
+ EGL+I + + ++ G + Y ++ G + A + + + ++
Sbjct: 406 HSGMVDEGLRIFNSMEEVYGIEPGMEHY----GCVVDLLGRAGLLGEAEEVMYSMPMEPS 461
Query: 353 IASWNALIAGFIRNGMIE 370
A W AL+ ++G +E
Sbjct: 462 AAVWGALLGACRKHGDVE 479
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 92/228 (40%), Gaps = 43/228 (18%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
+ L S L C+ A+ QG+ IH+ + + + + +L+++YAKCG
Sbjct: 293 KFVLSSVLAACANLGALDQGRWIHAYVNNNSNSFDAVLGTALVDMYAKCG---------- 342
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
RL+ A +VF+K K ++ +MI G + +A+E+
Sbjct: 343 ---------------------RLDMAWDVFEKMEKKEVFTWNAMICGLGMHGRAEDAIEL 381
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
F M+ PN +TL V+S+ H G + E GL I ++ I + + CV
Sbjct: 382 FFKMQKQKFRPNGITLLGVLSACAHSGMVDE-----GLRIFNSMEEVYGIEPGMEHYGCV 436
Query: 203 ------CSSLVEARSLFDEMK-ERNIVSWNVMLNGFAKAGLVELAREL 243
L EA + M E + W +L K G VEL +
Sbjct: 437 VDLLGRAGLLGEAEEVMYSMPMEPSAAVWGALLGACRKHGDVELGERV 484
>gi|413944078|gb|AFW76727.1| hypothetical protein ZEAMMB73_427029 [Zea mays]
Length = 794
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 168/449 (37%), Positives = 269/449 (59%), Gaps = 6/449 (1%)
Query: 219 RNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMY-RA 277
+++++ N +++ + + L+ AR+LF+ + +DVVSW T+IDGY + EA ++ R
Sbjct: 164 QSVLAGNALVHMYTSSMLLPDARKLFDEMADRDVVSWTTLIDGYARGGLPDEAWRVFCRM 223
Query: 278 MLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGR 337
++ + + PN+V +V SA G+ G G +H IV++G ++ ++ + CG
Sbjct: 224 VVAESVWPNEVTLVAAASAAGQMGLLGLGRTVHQCIVESGGRMSVNLENALVDMFGKCGC 283
Query: 338 INLARLQFE-LGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQ 396
+ A+ F+ + IKD + SW ++++ + + G +E+A +LF + R+V SWS M++ Y+
Sbjct: 284 VAAAKEVFDGMPIKD-VYSWTSMVSAYAKCGDLENAAKLFKEIPNRNVVSWSCMVAAYSH 342
Query: 397 NEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHE-YVLNNSITLNDN 455
P+ A+ +F+ M+ AGV+P + T+VSV A A +L G W ++ Y++++ + L N
Sbjct: 343 ANMPDEAIRIFNDMIAAGVEPIDATLVSVLSACAQLCSLDVGTWLYDTYIVSHKVELTPN 402
Query: 456 LSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEK 515
LS A IDM+AKCG + A +F ++ D+ +V WN +I +HG L ++ + +
Sbjct: 403 LSNAFIDMFAKCGDVGAASRLFSNMEDK--NVVSWNTMIMAHGLHGQPEEALHLFQEFKG 460
Query: 516 RNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLE 575
I + T+IGVLS C H GLV G +FK MK VY +EP +HY CM+DLLG+ G L+
Sbjct: 461 NGILPDEATYIGVLSACSHGGLVSEGRCHFKEMKIVYGIEPRAEHYACMIDLLGKVGLLQ 520
Query: 576 DAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYA 635
+A EV RSMP+ AD WG LL A R+HGNVE+G+ AA LAGL PS VL+S IYA
Sbjct: 521 EAFEVARSMPVGADEAGWGALLNACRMHGNVEIGKCAADKLAGLDPSDSGIYVLMSQIYA 580
Query: 636 DAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
+W +R MRD +K+ PG S +
Sbjct: 581 SKSKWGQVKMLRTVMRDRRVKKNPGCSSI 609
Score = 157 bits (398), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 113/419 (26%), Positives = 191/419 (45%), Gaps = 35/419 (8%)
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
+A N ++ Y + L DAR++FD+ + VS+T++I G+A+ EA VF M +
Sbjct: 167 LAGNALVHMYTSSMLLPDARKLFDEMADRDVVSWTTLIDGYARGGLPDEAWRVFCRMVVA 226
Query: 150 -GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVE 208
V PNEVTL + S++ +G + R +H +++ V + L++M+ C +
Sbjct: 227 ESVWPNEVTLVAAASAAGQMGLLGLGRTVHQCIVESGGRMSVNLENALVDMFGKCGCVAA 286
Query: 209 ARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERL 268
A+ +FD M +++ SW M++ +AK G +E A +LF+ IP+++VVSW M+ Y
Sbjct: 287 AKEVFDGMPIKDVYSWTSMVSAYAKCGDLENAAKLFKEIPNRNVVSWSCMVAAYSHANMP 346
Query: 269 SEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIH-SIIVKAGFDCYDFIQAT 327
EA+ ++ M+ G+ P D +V ++SAC + + G ++ + IV + +
Sbjct: 347 DEAIRIFNDMIAAGVEPIDATLVSVLSACAQLCSLDVGTWLYDTYIVSHKVELTPNLSNA 406
Query: 328 IIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSW 387
I +A CG + A F ++ SWN +I +G
Sbjct: 407 FIDMFAKCGDVGAASRLFSNMEDKNVVSWNTMIMAHGLHG-------------------- 446
Query: 388 SAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWA-HEYVL 446
QP AL LF G+ P+E T + V A + G + EGR E +
Sbjct: 447 -----------QPEEALHLFQEFKGNGILPDEATYIGVLSACSHGGLVSEGRCHFKEMKI 495
Query: 447 NNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANL 505
I A +ID+ K G + AFEV + W A++ MHG+ +
Sbjct: 496 VYGIEPRAEHYACMIDLLGKVGLLQEAFEVARSMPVGADEAG-WGALLNACRMHGNVEI 553
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 103/387 (26%), Positives = 172/387 (44%), Gaps = 75/387 (19%)
Query: 257 TMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKA 316
TM+ G+L+ + + ALT++R +L D +A + IV + A + + E IH + K
Sbjct: 102 TMMRGFLRAGKPTHALTLFRRVLRDRLAVDARTIVFAVKAAATSSSPTEA--IHCVAFKR 159
Query: 317 GFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLF 376
GF I + + NAL+ + + ++ DAR+LF
Sbjct: 160 GF------------------------------IGQSVLAGNALVHMYTSSMLLPDARKLF 189
Query: 377 NNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDA-GVKPNEITMVSVFCAIASSGTL 435
+ M RDV SW+ +I GYA+ P+ A +F MV A V PNE+T+V+ A G L
Sbjct: 190 DEMADRDVVSWTTLIDGYARGGLPDEAWRVFCRMVVAESVWPNEVTLVAAASAAGQMGLL 249
Query: 436 KEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVF--YHIRDRTTSVSPWNAI 493
GR H+ ++ + ++ NL A++DM+ KCG + A EVF I+D V W ++
Sbjct: 250 GLGRTVHQCIVESGGRMSVNLENALVDMFGKCGCVAAAKEVFDGMPIKD----VYSWTSM 305
Query: 494 ICGLAMHGDANLTLKIYSDLEKRN-------------------------------IKLNS 522
+ A GD K++ ++ RN ++
Sbjct: 306 VSAYAKCGDLENAAKLFKEIPNRNVVSWSCMVAAYSHANMPDEAIRIFNDMIAAGVEPID 365
Query: 523 ITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVE--PDLKHYGCMVDLLGRAGQLEDAEEV 580
T + VLS C +D+G + + + VE P+L + +D+ + G + A +
Sbjct: 366 ATLVSVLSACAQLCSLDVGTWLYDTYIVSHKVELTPNLSN--AFIDMFAKCGDVGAASRL 423
Query: 581 IRSMPMKADVVIWGTLLAASRIHGNVE 607
+M K +VV W T++ A +HG E
Sbjct: 424 FSNMEDK-NVVSWNTMIMAHGLHGQPE 449
Score = 112 bits (279), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 87/361 (24%), Positives = 160/361 (44%), Gaps = 54/361 (14%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E+ LV+A + G+ +H I +SG + ++N+L++++ KCG ++ AK +FD
Sbjct: 233 EVTLVAAASAAGQMGLLGLGRTVHQCIVESGGRMSVNLENALVDMFGKCGCVAAAKEVFD 292
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
D + M+S Y + L +A ++F + P + VS++ M+ ++ + EA+ +
Sbjct: 293 GMPIKDVYSWTSMVSAYAKCGDLENAAKLFKEIPNRNVVSWSCMVAAYSHANMPDEAIRI 352
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLG----GIWECRMLHGLVIKLMIDGFVIISTNLLN 198
F DM GV P + TL SV+S+ L G W + ++ ++ +S ++
Sbjct: 353 FNDMIAAGVEPIDATLVSVLSACAQLCSLDVGTW---LYDTYIVSHKVELTPNLSNAFID 409
Query: 199 MYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTM 258
M+ C + A LF M+++N+VSWN M+ G E
Sbjct: 410 MFAKCGDVGAASRLFSNMEDKNVVSWNTMIMAHGLHGQPE-------------------- 449
Query: 259 IDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGF 318
EAL +++ +GI P++ + ++SAC EG + H +K +
Sbjct: 450 -----------EALHLFQEFKGNGILPDEATYIGVLSACSHGGLVSEG-RCHFKEMKIVY 497
Query: 319 DCYDFIQATIIHFYAAC-----GRINLARLQFELG----IKDHIASWNALIAGFIRNGMI 369
I+ H+ AC G++ L + FE+ + A W AL+ +G +
Sbjct: 498 G----IEPRAEHY--ACMIDLLGKVGLLQEAFEVARSMPVGADEAGWGALLNACRMHGNV 551
Query: 370 E 370
E
Sbjct: 552 E 552
>gi|359475558|ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 848
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 196/624 (31%), Positives = 323/624 (51%), Gaps = 96/624 (15%)
Query: 42 GQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIR 101
G++IH +FK G + + F+ SLI++Y++ G + A+S+F
Sbjct: 191 GRKIHCWVFKLGFQWDVFVAASLIHMYSRFGFVGIARSLF-------------------- 230
Query: 102 NDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASV 161
D P + S+ +MI G QN +AL+V +MR+ G+ + VT+AS+
Sbjct: 231 -----------DDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGINMDSVTVASI 279
Query: 162 ISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNI 221
+ LG I ++H VIK ++ + +S L+NMY
Sbjct: 280 LPVCAQLGDISTATLIHLYVIKHGLEFELFVSNALINMY--------------------- 318
Query: 222 VSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCD 281
AK G + A+++F+++ +DVVSW ++I Y Q + A + M +
Sbjct: 319 ----------AKFGNLGDAQKVFQQMFLRDVVSWNSIIAAYEQNDDPVTARGFFFKMQLN 368
Query: 282 GIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLA 341
G+ P+ + +V L S ++ + +H I++ G+ ++A +I
Sbjct: 369 GLEPDLLTLVSLASIAAQSRDYKNSRSVHGFIMRRGW----LMEAVVIG----------- 413
Query: 342 RLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPN 401
NA++ + + G+I+ A ++FN + +DV SW+ +ISGY QN +
Sbjct: 414 ---------------NAVMDMYAKLGVIDSAHKVFNLIPVKDVVSWNTLISGYTQNGLAS 458
Query: 402 MALELFHGMVDA-GVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAI 460
A+E++ M + +K N+ T VS+ A A G L++G H +++ ++ L+ + +
Sbjct: 459 EAIEVYRMMEECREIKLNQGTWVSILAAYAHVGALQQGMRIHGHLIKTNLHLDVFVGTCL 518
Query: 461 IDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKL 520
ID+Y KCG + A +FY + R +SV PWNAII +HG LK++ +++ +K
Sbjct: 519 IDLYGKCGRLVDAMCLFYQV-PRESSV-PWNAIISCHGIHGHGEKALKLFREMQDEGVKP 576
Query: 521 NSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEV 580
+ +TFI +LS C H+GLVD G+ +F M+ Y ++P LKHYGCMVDLLGRAG LE A +
Sbjct: 577 DHVTFISLLSACSHSGLVDEGKWFFHLMQE-YGIKPSLKHYGCMVDLLGRAGFLEMAYDF 635
Query: 581 IRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRW 640
I+ MP+ D IWG LL A RIHGN+E+G+ A+ L + + VLLSNIYA+ G+W
Sbjct: 636 IKDMPLHPDASIWGALLGACRIHGNIELGKFASDRLFEVDSENVGYYVLLSNIYANVGKW 695
Query: 641 EDAFSIRKEMRDCGMKRLPGFSGV 664
E +R R+ G+K+ PG+S +
Sbjct: 696 EGVDKVRSLARERGLKKTPGWSSI 719
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 151/611 (24%), Positives = 260/611 (42%), Gaps = 115/611 (18%)
Query: 42 GQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIR 101
+++H+L+ SG + FI L+NLYA G +S ++ FD D
Sbjct: 92 AKRLHALLVVSGKIQSNFISIRLVNLYASLGDVSLSRGTFDQIQRKD------------- 138
Query: 102 NDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEV-TLAS 160
++ SMI + +N +REA++ F + ++ + T
Sbjct: 139 ------------------VYTWNSMISAYVRNGHFREAIDCFYQLLLVTKFQADFYTFPP 180
Query: 161 VISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERN 220
V+ + L + R +H V KL V ++ +L++MY
Sbjct: 181 VLKACQTLV---DGRKIHCWVFKLGFQWDVFVAASLIHMY-------------------- 217
Query: 221 IVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLC 280
++ G V +AR LF+ +P +D+ SW MI G +Q ++AL + M
Sbjct: 218 -----------SRFGFVGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRL 266
Query: 281 DGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINL 340
+GI + V + ++ C + IH ++K G + F+ +I+ YA G +
Sbjct: 267 EGINMDSVTVASILPVCAQLGDISTATLIHLYVIKHGLEFELFVSNALINMYAKFGNLGD 326
Query: 341 ARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQP 400
A+ F+ + SWN++IA Y QN+ P
Sbjct: 327 AQKVFQQMFLRDVVSWNSIIA-------------------------------AYEQNDDP 355
Query: 401 NMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLND-NLSAA 459
A F M G++P+ +T+VS+ A S K R H +++ + + A
Sbjct: 356 VTARGFFFKMQLNGLEPDLLTLVSLASIAAQSRDYKNSRSVHGFIMRRGWLMEAVVIGNA 415
Query: 460 IIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEK-RNI 518
++DMYAK G I++A +VF I V WN +I G +G A+ +++Y +E+ R I
Sbjct: 416 VMDMYAKLGVIDSAHKVFNLI--PVKDVVSWNTLISGYTQNGLASEAIEVYRMMEECREI 473
Query: 519 KLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAE 578
KLN T++ +L+ H G + G R + N+ D+ C++DL G+ G+L DA
Sbjct: 474 KLNQGTWVSILAAYAHVGALQQGMRIHGHLIKT-NLHLDVFVGTCLIDLYGKCGRLVDAM 532
Query: 579 EVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSL-----AGLQPSHGPSRVLLS-- 631
+ +P ++ V W +++ IHG+ GE+A K G++P H LLS
Sbjct: 533 CLFYQVPRESSVP-WNAIISCHGIHGH---GEKALKLFREMQDEGVKPDHVTFISLLSAC 588
Query: 632 --NIYADAGRW 640
+ D G+W
Sbjct: 589 SHSGLVDEGKW 599
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 115/487 (23%), Positives = 200/487 (41%), Gaps = 102/487 (20%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+ + S L C+ +S IH + K GLE F+ N+LIN+YAK G + A+ +F
Sbjct: 274 VTVASILPVCAQLGDISTATLIHLYVIKHGLEFELFVSNALINMYAKFGNLGDAQKVFQQ 333
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
D V+ N +I+ Y +ND AR F K
Sbjct: 334 MFLRDVVSWNSIIAAYEQNDDPVTARGFFFK----------------------------- 364
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIK--LMIDGFVIISTNLLNMYC 201
M++ G+ P+ +TL S+ S + R +HG +++ +++ V+I +++MY
Sbjct: 365 --MQLNGLEPDLLTLVSLASIAAQSRDYKNSRSVHGFIMRRGWLMEA-VVIGNAVMDMYA 421
Query: 202 VCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDG 261
+ A +F+ + +++VSWN +++G+ + GL
Sbjct: 422 KLGVIDSAHKVFNLIPVKDVVSWNTLISGYTQNGLA------------------------ 457
Query: 262 YLQVERLSEALTMYRAM-LCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDC 320
SEA+ +YR M C I N V +++A A +G++IH ++K
Sbjct: 458 -------SEAIEVYRMMEECREIKLNQGTWVSILAAYAHVGALQQGMRIHGHLIKTNLHL 510
Query: 321 YDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ 380
F+ +I Y CGR+ A F ++ WNA+I+ +G E A +LF MQ
Sbjct: 511 DVFVGTCLIDLYGKCGRLVDAMCLFYQVPRESSVPWNAIISCHGIHGHGEKALKLFREMQ 570
Query: 381 KRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRW 440
D GVKP+ +T +S+ A + SG + EG+W
Sbjct: 571 -------------------------------DEGVKPDHVTFISLLSACSHSGLVDEGKW 599
Query: 441 AHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRT--TSVSPWNAIICGLA 498
+ I + ++D+ + G + A++ I+D S W A++
Sbjct: 600 FFHLMQEYGIKPSLKHYGCMVDLLGRAGFLEMAYDF---IKDMPLHPDASIWGALLGACR 656
Query: 499 MHGDANL 505
+HG+ L
Sbjct: 657 IHGNIEL 663
>gi|359483488|ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 933
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 200/710 (28%), Positives = 332/710 (46%), Gaps = 134/710 (18%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E S L+ CS + G+Q+H ++ SG E + F+ N+L+ +YAKC +K +FD
Sbjct: 157 EFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFD 216
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+ P + VS+ ++ + Q D EA+ +
Sbjct: 217 -------------------------------EIPERNVVSWNALFSCYVQIDFCGEAVGL 245
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
F +M + G+ PNE +L+S++++ L +++HG +IKL D + L++MY
Sbjct: 246 FYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAK 305
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNG-------------------------------- 230
L +A S+F+++K+ +IVSWN ++ G
Sbjct: 306 VGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRSGICPNIFTLSSA 365
Query: 231 ---FAKAGLVELAREL-----------------------------------FERIPSKDV 252
A GL EL R+L F +P KD+
Sbjct: 366 LKACAGMGLKELGRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDL 425
Query: 253 VSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSI 312
++W +I GY Q EAL+++ M +GI N + ++ + Q+H +
Sbjct: 426 IAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGL 485
Query: 313 IVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDA 372
VK+GF ++ ++I Y C + A FE + S+ ++I + + G E+A
Sbjct: 486 SVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEA 545
Query: 373 RQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASS 432
+LF MQ D +KP+ S+ A A+
Sbjct: 546 LKLFLEMQ-------------------------------DMELKPDRFVCSSLLNACANL 574
Query: 433 GTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNA 492
++G+ H ++L L+ ++++MYAKCGSI+ A F + +R + W+A
Sbjct: 575 SAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTER--GIVSWSA 632
Query: 493 IICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVY 552
+I GLA HG L++++ + K + N IT + VL C HAGLV + YF+SM+ ++
Sbjct: 633 MIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNHAGLVTEAKLYFESMEELF 692
Query: 553 NVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERA 612
+P +HY CM+DLLGRAG++ +A E++ MP +A+ +WG LL A+RIH +VE+G RA
Sbjct: 693 GFKPMQEHYACMIDLLGRAGKINEAVELVNKMPFEANASVWGALLGAARIHKDVELGRRA 752
Query: 613 AKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
A+ L L+P + VLL+NIYA AG+WE+ +R+ MRD +K+ PG S
Sbjct: 753 AEMLFILEPEKSGTHVLLANIYASAGKWENVAEVRRLMRDSKVKKEPGMS 802
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 154/606 (25%), Positives = 261/606 (43%), Gaps = 103/606 (16%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
L C ++ G QIH+ I KSGL + I+N LINLY+KC A+ + D S D
Sbjct: 63 LSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRNFGYARKLVDESSEPD- 121
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
VS++++I G+AQN AL F +M +L
Sbjct: 122 ------------------------------LVSWSALISGYAQNGLGGGALMAFHEMHLL 151
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
GV NE T +SV+ + + + + +HG+V+ +G V ++ L+ MY C +++
Sbjct: 152 GVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDS 211
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLS 269
+ LFDE IP ++VVSW + Y+Q++
Sbjct: 212 KRLFDE-------------------------------IPERNVVSWNALFSCYVQIDFCG 240
Query: 270 EALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATII 329
EA+ ++ M+ GI PN+ + +++AC G IH ++K G+D F ++
Sbjct: 241 EAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALV 300
Query: 330 HFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSA 389
YA G + A FE + I SWNA+IAG +
Sbjct: 301 DMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVL------------------------ 336
Query: 390 MISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNS 449
+E ALEL M +G+ PN T+ S A A G + GR H ++
Sbjct: 337 -------HEHHEQALELLGQMKRSGICPNIFTLSSALKACAGMGLKELGRQLHSSLMKMD 389
Query: 450 ITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKI 509
+ + +S ++DMY+KC + A F + ++ + WNAII G + + + L +
Sbjct: 390 MESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEK--DLIAWNAIISGYSQYWEDMEALSL 447
Query: 510 YSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGER-YFKSMKSVYNVEPDLKHYGCMVDLL 568
+ ++ K I N T +L + +V + + + S+KS ++ D+ ++D
Sbjct: 448 FVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFH--SDIYVVNSLIDSY 505
Query: 569 GRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSH-GPSR 627
G+ +EDAE + + D+V + +++ A +G GE A K +Q P R
Sbjct: 506 GKCSHVEDAERIFEECTI-GDLVSFTSMITAYAQYGQ---GEEALKLFLEMQDMELKPDR 561
Query: 628 VLLSNI 633
+ S++
Sbjct: 562 FVCSSL 567
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 106/447 (23%), Positives = 185/447 (41%), Gaps = 66/447 (14%)
Query: 153 PNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSL 212
P V+ + ++S + +H + K + I +L+N+Y C + AR L
Sbjct: 54 PTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRNFGYARKL 113
Query: 213 FDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEAL 272
DE E ++VSW+ +++G+A+ GL AL
Sbjct: 114 VDESSEPDLVSWSALISGYAQNGLG-------------------------------GGAL 142
Query: 273 TMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFY 332
+ M G+ N+ ++ AC G Q+H ++V +GF+ F+ T++ Y
Sbjct: 143 MAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMY 202
Query: 333 AACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMIS 392
A C ++ F+ + ++ SWNAL S
Sbjct: 203 AKCDEFLDSKRLFDEIPERNVVSWNAL-------------------------------FS 231
Query: 393 GYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITL 452
Y Q + A+ LF+ MV +G+KPNE ++ S+ A G+ H Y++
Sbjct: 232 CYVQIDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDW 291
Query: 453 NDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSD 512
+ + A++DMYAK G + A VF I+ + WNA+I G +H L++
Sbjct: 292 DPFSANALVDMYAKVGDLADAISVFEKIKQ--PDIVSWNAVIAGCVLHEHHEQALELLGQ 349
Query: 513 LEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAG 572
+++ I N T L C GL +LG + S+ + ++E DL +VD+ +
Sbjct: 350 MKRSGICPNIFTLSSALKACAGMGLKELGRQLHSSLMKM-DMESDLFVSVGLVDMYSKCD 408
Query: 573 QLEDAEEVIRSMPMKADVVIWGTLLAA 599
LEDA +P K D++ W +++
Sbjct: 409 LLEDARMAFNLLPEK-DLIAWNAIISG 434
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 84/351 (23%), Positives = 141/351 (40%), Gaps = 60/351 (17%)
Query: 283 IAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLAR 342
P V L+S C + GLQIH+ I K+G I+ +I+ Y+ C AR
Sbjct: 52 FTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRNFGYAR 111
Query: 343 LQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNM 402
+ + + SW+ALI+G+ +NG+
Sbjct: 112 KLVDESSEPDLVSWSALISGYAQNGL-------------------------------GGG 140
Query: 403 ALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIID 462
AL FH M GVK NE T SV A + L+ G+ H V+ + + ++ ++
Sbjct: 141 ALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVV 200
Query: 463 MYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNS 522
MYAKC + +F I +R +V WNA+ + ++ ++ IK N
Sbjct: 201 MYAKCDEFLDSKRLFDEIPER--NVVSWNALFSCYVQIDFCGEAVGLFYEMVLSGIKPNE 258
Query: 523 ITFIGVLSTCC-----------HAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRA 571
+ +++ C H L+ LG Y+ +P + +VD+ +
Sbjct: 259 FSLSSMVNACTGLRDSSRGKIIHGYLIKLG----------YDWDPFSAN--ALVDMYAKV 306
Query: 572 GQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPS 622
G L DA V + + D+V W ++A +H E E+A + L ++ S
Sbjct: 307 GDLADAISVFEKIK-QPDIVSWNAVIAGCVLH---EHHEQALELLGQMKRS 353
>gi|449433141|ref|XP_004134356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 181/560 (32%), Positives = 297/560 (53%), Gaps = 66/560 (11%)
Query: 108 AREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGV-IPNEVTLASVISSSV 166
A VF T +++ SM+ F ++ R AL+ + +M +P+ T S++
Sbjct: 31 AYSVFAHTRELDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCA 90
Query: 167 HLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNV 226
L ++LHG V+K M+ + I T LLNMY C L
Sbjct: 91 LLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDL-------------------- 130
Query: 227 MLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPN 286
+ AR LFER+ ++ V W +MI GY++ +EAL +Y+ M DG +P+
Sbjct: 131 -----------KSARFLFERMGHRNKVVWTSMISGYMKNHCPNEALLLYKKMEEDGFSPD 179
Query: 287 DVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFE 346
+V + L+SAC G G+++HS I + + + +++ YA CG +
Sbjct: 180 EVTMATLVSACAELKDLGVGMKLHSHIREMDMKICAVLGSALVNMYAKCGDL-------- 231
Query: 347 LGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALEL 406
+ ARQ+F+ + +DVY+WSA+I GY +N + AL+L
Sbjct: 232 -----------------------KTARQVFDKLSDKDVYAWSALIFGYVKNNRSTEALQL 268
Query: 407 FHGMVD-AGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYA 465
F + + ++PNE+T+++V A A G L+ GRW H+Y+ + +L+ ++IDM++
Sbjct: 269 FREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFS 328
Query: 466 KCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITF 525
KCG I+ A +F + + + WN+++ G A+HG L + ++ +++ + ITF
Sbjct: 329 KCGDIDAAKRIFDSMSYK--DLISWNSMVNGFALHGLGREALAQFRLMQTTDLQPDEITF 386
Query: 526 IGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMP 585
IGVL+ C HAGLV G++ F ++++Y V +HYGCMVDLL RAG L +A E IR MP
Sbjct: 387 IGVLTACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMP 446
Query: 586 MKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFS 645
++ D IWG++L A R++ N+E+GE AA+ L L+P++ +LLSNIYA W +
Sbjct: 447 LQPDGAIWGSMLGACRVYNNLELGEEAARFLLKLEPTNDGVYILLSNIYAKRKMWNEVKK 506
Query: 646 IRKEMRDCGMKRLPGFSGVV 665
+R+ M + G+++ PG S VV
Sbjct: 507 VRELMNEKGIQKTPGCSSVV 526
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 111/479 (23%), Positives = 204/479 (42%), Gaps = 102/479 (21%)
Query: 18 QNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQA 77
+N S L+ C+ + G+ +H + K L S+ +I+ +L+N+YA CG
Sbjct: 74 RNVPDRFTFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACG----- 128
Query: 78 KSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWR 137
L AR +F++ + V +TSMI G+ +N C
Sbjct: 129 --------------------------DLKSARFLFERMGHRNKVVWTSMISGYMKNHCPN 162
Query: 138 EALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLL 197
EAL +++ M G P+EVT+A+++S+ L + LH + ++ + ++ + L+
Sbjct: 163 EALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDMKICAVLGSALV 222
Query: 198 NMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGT 257
NMY C L AR +FD++ ++++ +W+
Sbjct: 223 NMYAKCGDLKTARQVFDKLSDKDVYAWS-------------------------------A 251
Query: 258 MIDGYLQVERLSEALTMYRAML-CDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKA 316
+I GY++ R +EAL ++R + + PN+V I+ +ISAC + G +H I +
Sbjct: 252 LIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRT 311
Query: 317 GFDCYDFIQATIIHFYAACGRINLARLQFE-LGIKDHIASWNALIAGFIRNGMIEDARQL 375
+ ++I ++ CG I+ A+ F+ + KD I SWN+++ GF +G+ +A
Sbjct: 312 QKGHSVSLNNSLIDMFSKCGDIDAAKRIFDSMSYKDLI-SWNSMVNGFALHGLGREALAQ 370
Query: 376 FNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTL 435
F MQ D ++P+EIT + V A + +G +
Sbjct: 371 FRLMQTTD-------------------------------LQPDEITFIGVLTACSHAGLV 399
Query: 436 KEG-RWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAI 493
+EG + +E + L ++D+ + G + A E R + P AI
Sbjct: 400 QEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFI-----RVMPLQPDGAI 453
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 102/243 (41%), Gaps = 49/243 (20%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E+ +++ + C+ + G+ +H I ++ + + NSLI++++KCG I AK
Sbjct: 282 EVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAK---- 337
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+FD K +S+ SM+ GFA + REAL
Sbjct: 338 ---------------------------RIFDSMSYKDLISWNSMVNGFALHGLGREALAQ 370
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGI-------WECRMLHGLVIKLMIDGFVIISTN 195
FR M+ + P+E+T V+++ H G + +E L+G+ +K G ++
Sbjct: 371 FRLMQTTDLQPDEITFIGVLTACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMV---- 426
Query: 196 LLNMYCVCSSLVEARSLFDEMK-ERNIVSWNVMLNGFAKAGLVEL----ARELFERIPSK 250
++ C L EAR M + + W ML +EL AR L + P+
Sbjct: 427 --DLLCRAGLLAEAREFIRVMPLQPDGAIWGSMLGACRVYNNLELGEEAARFLLKLEPTN 484
Query: 251 DVV 253
D V
Sbjct: 485 DGV 487
>gi|115457318|ref|NP_001052259.1| Os04g0218100 [Oryza sativa Japonica Group]
gi|113563830|dbj|BAF14173.1| Os04g0218100, partial [Oryza sativa Japonica Group]
Length = 890
Score = 320 bits (820), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 206/657 (31%), Positives = 334/657 (50%), Gaps = 65/657 (9%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
L L+ C + G H LI +G ESN FI N+L+ +Y++CG + +A +FD
Sbjct: 155 HFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFD 214
Query: 83 SCSTL---DPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREA 139
+ D ++ N ++S ++++ A ++F K T ++ N+ R
Sbjct: 215 EITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKM--------TLIVHEKPTNE--RSD 264
Query: 140 LEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNM 199
+ +++ +++ + L + + + +HG I+ V + L++
Sbjct: 265 I---------------ISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDA 309
Query: 200 YCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELF-----ERIPSKDVVS 254
Y C + A +F+ M+ +++VSWN M+ G++++G E A ELF E IP DVV+
Sbjct: 310 YAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIP-LDVVT 368
Query: 255 WGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIV 314
W +I GY Q EAL ++R M+ G PN V I+ ++SAC AF +G +IH+ +
Sbjct: 369 WTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSL 428
Query: 315 KAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDH-IASWNALIAGFIRNGMIEDAR 373
K +C L L + G +D + +NALI + + + AR
Sbjct: 429 K---NC-------------------LLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAAR 466
Query: 374 QLFNN--MQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDA--GVKPNEITMVSVFCAI 429
+F++ +++R+V +W+ MI G+AQ N AL+LF M+ GV PN T+ + A
Sbjct: 467 SIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMAC 526
Query: 430 ASSGTLKEGRWAHEYVLNNSITLNDNLSAA--IIDMYAKCGSINTAFEVFYHIRDRTTSV 487
A ++ G+ H YVL + + A +IDMY+KCG ++TA VF + + S
Sbjct: 527 AHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQK--SA 584
Query: 488 SPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKS 547
W +++ G MHG + L I+ + K + ITF+ VL C H G+VD G YF S
Sbjct: 585 ISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDS 644
Query: 548 MKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVE 607
M + Y + P +HY C +DLL R+G+L+ A ++ MPM+ V+W LL+A R+H NVE
Sbjct: 645 MSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVALLSACRVHSNVE 704
Query: 608 VGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
+ E A L + + S L+SNIYA AGRW+D IR M+ G+K+ PG S V
Sbjct: 705 LAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSWV 761
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 142/541 (26%), Positives = 247/541 (45%), Gaps = 89/541 (16%)
Query: 1 TPLDHFH--SVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNT 58
T LD F ++ +K + SD +++V+ L C + AV Q +++H ++G +
Sbjct: 242 TALDLFSKMTLIVHEKPTNERSDI-ISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDV 300
Query: 59 FIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVF-----D 113
F+ N+LI+ YAKCGL+ A +F+ D V+ N M++GY ++ A E+F +
Sbjct: 301 FVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKE 360
Query: 114 KTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWE 173
P+ V++T++I G++Q C EAL +FR M G +PN VT+ SV+S+ LG +
Sbjct: 361 NIPLD-VVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQ 419
Query: 174 CRMLHGLVIKLMI----------DGFVIISTNLLNMYCVCSSLVEARSLFDE--MKERNI 221
+H +K + D +++ L++MY C S ARS+FD+ ++ERN+
Sbjct: 420 GTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNV 479
Query: 222 VSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCD 281
V+W VM+ G A+ G A +LF VE +SE
Sbjct: 480 VTWTVMIGGHAQYGDSNDALKLF--------------------VEMISEPY--------- 510
Query: 282 GIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD----FIQATIIHFYAACGR 337
G+APN I ++ AC A G QIH+ +++ Y+ F+ +I Y+ CG
Sbjct: 511 GVAPNAYTISCILMACAHLAAIRIGKQIHAYVLR--HHRYESSAYFVANCLIDMYSKCGD 568
Query: 338 INLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQN 397
++ AR F+ + SW +++ G+ +G +A +F+ M+K
Sbjct: 569 VDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRK---------------- 612
Query: 398 EQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG-RWAHEYVLNNSITLNDNL 456
AG P++IT + V A + G + +G + + +T
Sbjct: 613 ---------------AGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEH 657
Query: 457 SAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKR 516
A ID+ A+ G ++ A+ + T+V W A++ +H + L + L +
Sbjct: 658 YACAIDLLARSGRLDKAWRTVKDMPMEPTAVV-WVALLSACRVHSNVELAEHALNKLVEM 716
Query: 517 N 517
N
Sbjct: 717 N 717
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 90/424 (21%), Positives = 172/424 (40%), Gaps = 77/424 (18%)
Query: 231 FAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMI 290
+ G + A + ER+ V W +I +++ RL A+ + ML G P+ +
Sbjct: 99 YLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRPDHFTL 158
Query: 291 VDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQF----E 346
++ ACG ++ G H +I GF+ FI ++ Y+ CG + A + F +
Sbjct: 159 PHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQ 218
Query: 347 LGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALEL 406
GI D + SWN++++ +++ A LF+ M + ++ NE+ ++
Sbjct: 219 RGIDD-VISWNSIVSAHVKSSNAWTALDLFSKM--------TLIVHEKPTNERSDI---- 265
Query: 407 FHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAK 466
I++V++ A S + + + H + N + + A+ID YAK
Sbjct: 266 -------------ISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAK 312
Query: 467 CGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKL------ 520
CG + A +VF + + V WNA++ G + G+ +++ ++ K NI L
Sbjct: 313 CGLMENAVKVFNMMEFK--DVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWT 370
Query: 521 -----------------------------NSITFIGVLSTCCHAGLVDLG-ERYFKSMKS 550
N +T I VLS C G G E + S+K+
Sbjct: 371 AVIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKN 430
Query: 551 VY--------NVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKA-DVVIWGTLLAASR 601
+ DL Y ++D+ + + A + +P++ +VV W ++
Sbjct: 431 CLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHA 490
Query: 602 IHGN 605
+G+
Sbjct: 491 QYGD 494
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 112/261 (42%), Gaps = 11/261 (4%)
Query: 357 NALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVK 416
++A ++ G + A + + W+ +I + + + + A+ + M+ AG +
Sbjct: 93 TGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTR 152
Query: 417 PNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEV 476
P+ T+ V A + + G H + N N + A++ MY++CGS+ A +
Sbjct: 153 PDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMI 212
Query: 477 FYHIRDR-TTSVSPWNAIICGLAMHGDANLTLKIYSDL------EKRNIKLNSITFIGVL 529
F I R V WN+I+ +A L ++S + + N + + I+ + +L
Sbjct: 213 FDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNIL 272
Query: 530 STCCHAGLV-DLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKA 588
C V E + ++++ PD+ ++D + G +E+A +V M K
Sbjct: 273 PACGSLKAVPQTKEVHGNAIRN--GTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFK- 329
Query: 589 DVVIWGTLLAASRIHGNVEVG 609
DVV W ++A GN E
Sbjct: 330 DVVSWNAMVAGYSQSGNFEAA 350
>gi|359484088|ref|XP_002263394.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 762
Score = 320 bits (820), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 187/540 (34%), Positives = 286/540 (52%), Gaps = 72/540 (13%)
Query: 123 YTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVI 182
Y S+I + + EAL ++ M G+ P+ +T VI + W ++H V+
Sbjct: 163 YNSLIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFVIKACNESSVTWFGLLVHTHVV 222
Query: 183 KLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARE 242
K + I ++L+++Y L A+ LF N+ S
Sbjct: 223 KSGFECDSYIVSSLIHLYANGKDLGAAKQLF------NLCS------------------- 257
Query: 243 LFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMA 302
++DVVSW MIDGY++ + A ++ M+C D+IS
Sbjct: 258 ------ARDVVSWNAMIDGYVKHVEMGHARMVFDRMVCR----------DVIS------- 294
Query: 303 FGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAG 362
T+I+ YA G+I+ A+ F+ + ++ SWN+++AG
Sbjct: 295 ----------------------WNTMINGYAIVGKIDEAKRLFDEMPERNLVSWNSMLAG 332
Query: 363 FIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITM 422
F++ G +EDA LF+ M RDV SW++M++ YAQ +PN AL LF M GVKP E T+
Sbjct: 333 FVKCGNVEDAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQMRAVGVKPTEATV 392
Query: 423 VSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRD 482
VS+ A A G L +G H Y+ +N I +N + A++DMYAKCG I+ A +VF +
Sbjct: 393 VSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMES 452
Query: 483 RTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGE 542
+ V WN II G+A+HG+ +++ ++++ ++ N ITF+ +LS C HAG+VD G+
Sbjct: 453 K--DVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVAILSACSHAGMVDEGQ 510
Query: 543 RYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRI 602
+ M S Y +EP ++HYGC++DLL RAG LE+A E+I +MPM+ + G LL RI
Sbjct: 511 KLLDCMSSSYGIEPKVEHYGCVIDLLARAGFLEEAMELIGTMPMEPNPSALGALLGGCRI 570
Query: 603 HGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
HGN E+GE K L LQP H +LLSNIYA A +W+DA +R M+ G+ ++PG S
Sbjct: 571 HGNFELGEMVGKRLINLQPCHSGRYILLSNIYAAAKKWDDARKVRNLMKVNGISKVPGVS 630
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 147/318 (46%), Gaps = 61/318 (19%)
Query: 62 NSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCV 121
N++IN YA G I +AK +FD + V+ N M++G+++ + DA +F + P + V
Sbjct: 296 NTMINGYAIVGKIDEAKRLFDEMPERNLVSWNSMLAGFVKCGNVEDAFGLFSEMPCRDVV 355
Query: 122 SYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLV 181
S+ SM+ +AQ EAL +F MR +GV P E T+ S++S+ HLG + + LH +
Sbjct: 356 SWNSMLACYAQCGKPNEALALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYI 415
Query: 182 IKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELAR 241
I+ I+ T L++MY C + A +F+ M+ +++++WN ++ G A G V+ A+
Sbjct: 416 NDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGNVKEAQ 475
Query: 242 ELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAM 301
+LF + + EA G+ PND+ V ++SAC A
Sbjct: 476 QLF---------------------KEMKEA----------GVEPNDITFVAILSACSHAG 504
Query: 302 AFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIA 361
EG ++ DC + GI+ + + +I
Sbjct: 505 MVDEGQKL--------LDC----------------------MSSSYGIEPKVEHYGCVID 534
Query: 362 GFIRNGMIEDARQLFNNM 379
R G +E+A +L M
Sbjct: 535 LLARAGFLEEAMELIGTM 552
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 120/273 (43%), Gaps = 48/273 (17%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E +VS L C+ A+ +G +H+ I + +E N+ + +L+++YAKCG IS A +F+
Sbjct: 389 EATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFN 448
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+ + D +A N +I+ G A + +EA ++
Sbjct: 449 AMESKDVLAWNTIIA-------------------------------GMAIHGNVKEAQQL 477
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRML-------HGLVIKLMIDGFVIISTN 195
F++M+ GV PN++T +++S+ H G + E + L +G+ K+ G VI
Sbjct: 478 FKEMKEAGVEPNDITFVAILSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYGCVI---- 533
Query: 196 LLNMYCVCSSLVEARSLFDEMK-ERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVS 254
++ L EA L M E N + +L G G EL + +R+ +
Sbjct: 534 --DLLARAGFLEEAMELIGTMPMEPNPSALGALLGGCRIHGNFELGEMVGKRLINLQPCH 591
Query: 255 WGTMI---DGYLQVERLSEALTMYRAMLCDGIA 284
G I + Y ++ +A + M +GI+
Sbjct: 592 SGRYILLSNIYAAAKKWDDARKVRNLMKVNGIS 624
>gi|218188593|gb|EEC71020.1| hypothetical protein OsI_02714 [Oryza sativa Indica Group]
Length = 825
Score = 320 bits (820), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 190/637 (29%), Positives = 306/637 (48%), Gaps = 96/637 (15%)
Query: 26 LVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCS 85
L + L+ C GQ +H L+ K GLE++ + N LI +Y+KC A +F
Sbjct: 265 LPTVLKCCMELGLAKSGQAVHGLVIKRGLETDRVLNNCLIEMYSKCLSAEDAYEVFARID 324
Query: 86 TLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRD 145
D V C++MIS + DR + A E FD +F
Sbjct: 325 EPDVVHCSLMISCF---DRHDMAPEAFD----------------------------IFMQ 353
Query: 146 MRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSS 205
M +GV PN+ T + + G + CR +H ++K + ++ MY +
Sbjct: 354 MSDMGVKPNQYTFVGLAIVASRTGDVNLCRSIHAHIVKSGFSRTKGVCDAIVGMYVKTGA 413
Query: 206 LVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQV 265
+ +A FD M+ +I SWN +L+GF E
Sbjct: 414 VQDAILAFDLMQGPDIASWNTLLSGFYSGNNCE--------------------------- 446
Query: 266 ERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQ 325
L +++ ++C+G+ N V ++ C M G Q+H+ ++K+GF
Sbjct: 447 ----HGLRIFKELICEGVLANKYTYVGILRCCTSLMDLRFGCQVHACVLKSGFQ------ 496
Query: 326 ATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVY 385
G +++++ ++ +++ G +AR +F+ +++RDV+
Sbjct: 497 ----------GDYDVSKMLLDM---------------YVQAGCFTNARLVFDRLKERDVF 531
Query: 386 SWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYV 445
SW+ ++S YA+ ++ A+E F M+ +PN+ T+ + + L G H Y
Sbjct: 532 SWTVVMSTYAKTDEGEKAIECFRSMLRENKRPNDATLATSLSVCSDLACLGSGLQLHSYT 591
Query: 446 LNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANL 505
+ + + +S+A++DMY KCG++ A E+ + D T + WN IICG A HG
Sbjct: 592 IKSGWN-SSVVSSALVDMYVKCGNLADA-EMLFDESD-THDLVEWNTIICGYAQHGHGYK 648
Query: 506 TLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMV 565
L+ + ++ + ITF+GVLS C HAGL+D G RYFK + SVY + P L+HY CMV
Sbjct: 649 ALEAFQEMIDEGNVPDEITFVGVLSACSHAGLLDEGRRYFKLLSSVYGITPTLEHYACMV 708
Query: 566 DLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGP 625
D+L +AG+L +AE +I MP+ D +W T+L A R+HGN+E+ ERAA+ L QP
Sbjct: 709 DILAKAGKLAEAESLINEMPLTPDASLWKTILGACRMHGNIEIAERAAEKLFESQPDDIS 768
Query: 626 SRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
S +LLSNIYAD RW D +R + D G+K+ PG S
Sbjct: 769 SCILLSNIYADLKRWNDVAKLRSMLVDRGVKKEPGCS 805
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 148/628 (23%), Positives = 266/628 (42%), Gaps = 97/628 (15%)
Query: 28 SALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTL 87
+AL+ C+A A+ +G+ +H+ + +SG + F+ +SL+N+Y KCG
Sbjct: 65 AALQGCAASRALRRGKALHARLLRSGPRPDAFLHDSLLNMYCKCG--------------- 109
Query: 88 DPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMR 147
RL DAR VFD P + V++T+M+ AL +F +M
Sbjct: 110 ----------------RLADARSVFDGMPHRDVVAWTAMVSAITAAGDAGAALRLFAEMS 153
Query: 148 ILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKL--MIDGFVIISTNLLNMYCVCSS 205
GV+PN LA+ + + + +H +KL + D +V S++L+ Y C
Sbjct: 154 EEGVVPNGFALAAALKACTVGSDLGFTPQVHAQAVKLEGLFDPYV--SSSLVEAYVSCGE 211
Query: 206 L-VEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFER-IPSKDVVSWGTMID--- 260
+ V R+L D R+ VSWN +LN +A+ G +F++ + S D +S T+
Sbjct: 212 VDVAERALLDS-PVRSDVSWNALLNEYARDGDYAKVMLVFDKLVESGDEISKYTLPTVLK 270
Query: 261 -----GYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRA-------MAFGEGLQ 308
G + + L + R + D + N ++++ S C A E
Sbjct: 271 CCMELGLAKSGQAVHGLVIKRGLETDRVLNN--CLIEMYSKCLSAEDAYEVFARIDEPDV 328
Query: 309 IHSIIVKAGFDCYD--------FIQAT-------------IIHFYAACGRINLARLQFEL 347
+H ++ + FD +D F+Q + + + G +NL R
Sbjct: 329 VHCSLMISCFDRHDMAPEAFDIFMQMSDMGVKPNQYTFVGLAIVASRTGDVNLCR----- 383
Query: 348 GIKDHIAS---------WNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNE 398
I HI +A++ +++ G ++DA F+ MQ D+ SW+ ++SG+
Sbjct: 384 SIHAHIVKSGFSRTKGVCDAIVGMYVKTGAVQDAILAFDLMQGPDIASWNTLLSGFYSGN 443
Query: 399 QPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSA 458
L +F ++ GV N+ T V + S L+ G H VL + + ++S
Sbjct: 444 NCEHGLRIFKELICEGVLANKYTYVGILRCCTSLMDLRFGCQVHACVLKSGFQGDYDVSK 503
Query: 459 AIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNI 518
++DMY + G A VF +++R V W ++ A + ++ + + + N
Sbjct: 504 MLLDMYVQAGCFTNARLVFDRLKER--DVFSWTVVMSTYAKTDEGEKAIECFRSMLRENK 561
Query: 519 KLNSITFIGVLSTCCHAGLVDLG-ERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDA 577
+ N T LS C + G + + ++KS +N +VD+ + G L DA
Sbjct: 562 RPNDATLATSLSVCSDLACLGSGLQLHSYTIKSGWNSS---VVSSALVDMYVKCGNLADA 618
Query: 578 EEVIRSMPMKADVVIWGTLLAASRIHGN 605
E + D+V W T++ HG+
Sbjct: 619 EMLFDESDTH-DLVEWNTIICGYAQHGH 645
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 111/484 (22%), Positives = 208/484 (42%), Gaps = 60/484 (12%)
Query: 175 RMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKA 234
+ LH +++ + +LLNMYC C L +ARS+FD M R++V+W M++ A
Sbjct: 80 KALHARLLRSGPRPDAFLHDSLLNMYCKCGRLADARSVFDGMPHRDVVAWTAMVSAITAA 139
Query: 235 GLVELARELFERIPSKDVVSWGTMIDGYL-----------------QVERLSEALTMY-- 275
G A LF + + VV G + L Q +L Y
Sbjct: 140 GDAGAALRLFAEMSEEGVVPNGFALAAALKACTVGSDLGFTPQVHAQAVKLEGLFDPYVS 199
Query: 276 -----------------RAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGF 318
RA+L D +DV L++ R + + + + +V++G
Sbjct: 200 SSLVEAYVSCGEVDVAERALL-DSPVRSDVSWNALLNEYARDGDYAKVMLVFDKLVESGD 258
Query: 319 DCYDFIQATIIHFYAACGRINLAR-------LQFELGIKDHIASWNALIAGFIRNGMIED 371
+ + T++ C + LA+ L + G++ N LI + + ED
Sbjct: 259 EISKYTLPTVLK---CCMELGLAKSGQAVHGLVIKRGLETDRVLNNCLIEMYSKCLSAED 315
Query: 372 ARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIAS 431
A ++F + + DV S MIS + +++ A ++F M D GVKPN+ T V + +
Sbjct: 316 AYEVFARIDEPDVVHCSLMISCFDRHDMAPEAFDIFMQMSDMGVKPNQYTFVGLAIVASR 375
Query: 432 SGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWN 491
+G + R H +++ + + + AI+ MY K G++ A F + + ++ WN
Sbjct: 376 TGDVNLCRSIHAHIVKSGFSRTKGVCDAIVGMYVKTGAVQDAILAFDLM--QGPDIASWN 433
Query: 492 AIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLG---ERYFKSM 548
++ G + L+I+ +L + N T++G+L C L+DL + + +
Sbjct: 434 TLLSGFYSGNNCEHGLRIFKELICEGVLANKYTYVGILRCC--TSLMDLRFGCQVHACVL 491
Query: 549 KSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEV 608
KS + + D+ ++D+ +AG +A V + + DV W +++ + +
Sbjct: 492 KSGFQGDYDVSKM--LLDMYVQAGCFTNARLVFDRLKER-DVFSWTVVMST---YAKTDE 545
Query: 609 GERA 612
GE+A
Sbjct: 546 GEKA 549
>gi|359495457|ref|XP_003634994.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Vitis vinifera]
Length = 993
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 200/651 (30%), Positives = 321/651 (49%), Gaps = 100/651 (15%)
Query: 13 QKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCG 72
QKA+L + Y V+AL+ C + QG IH+ + KS N F+ N+LI +YA+ G
Sbjct: 310 QKASLAPNTY--TFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYARFG 367
Query: 73 LISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQ 132
+ +A ++F + D +S+ SM+ GF Q
Sbjct: 368 KMGEAANIFYNMDDWD-------------------------------TISWNSMLSGFVQ 396
Query: 133 NDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVII 192
N + EAL+ + +MR G P+ V + S+I++S G +H +K +D + +
Sbjct: 397 NGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLNGMQIHAYAMKNGLDSDLQV 456
Query: 193 STNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDV 252
+L++MY S+ +FD+M P KDV
Sbjct: 457 GNSLVDMYAKFCSMKYMDCIFDKM-------------------------------PDKDV 485
Query: 253 VSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSI 312
VSW T+I G+ Q S AL ++R + +GI + +MI ++ AC +IHS
Sbjct: 486 VSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSY 545
Query: 313 IVKAGFDCYDFI-QATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIED 371
I++ G D + Q I+ Y CG ++ A FEL
Sbjct: 546 IIRKGLS--DLVLQNGIVDVYGECGNVDYAARMFEL------------------------ 579
Query: 372 ARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIAS 431
++ +DV SW++MIS Y N N ALELFH M + GV+P+ I++VS+ A AS
Sbjct: 580 -------IEFKDVVSWTSMISCYVHNGLANEALELFHLMKETGVEPDSISLVSILSAAAS 632
Query: 432 SGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWN 491
LK+G+ H +++ L +L++ ++DMYA+CG++ + VF IR++ + W
Sbjct: 633 LSALKKGKEIHGFLIRKGFVLEGSLASTLVDMYARCGTLEKSRNVFNFIRNKDLVL--WT 690
Query: 492 AIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSV 551
++I MHG + ++ +E +I + I F+ VL C H+GL++ G R+ +SMK
Sbjct: 691 SMINAYGMHGCGRAAIDLFRRMEDESIAPDHIAFVAVLYACSHSGLMNEGRRFLESMKYE 750
Query: 552 YNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGER 611
Y +EP +HY C+VDLLGRA LE+A + ++ M ++ +W LL A +IH N E+GE
Sbjct: 751 YQLEPWPEHYVCLVDLLGRANHLEEAYQFVKGMEVEPTAEVWCALLGACQIHSNKELGEI 810
Query: 612 AAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
AA+ L + P + + VL+SN+YA RW+D +R M+ G+K+ PG S
Sbjct: 811 AAQKLLEMDPENPGNYVLVSNVYAAERRWKDVEEVRMRMKASGLKKNPGCS 861
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 145/594 (24%), Positives = 260/594 (43%), Gaps = 114/594 (19%)
Query: 15 ANLQNSDYEL--ALVSALRYCSAHIAVSQGQQIHS-LIFKSGLESNTFIQNSLINLYAKC 71
AN S + L A S L C + A+S+GQQ+H+ +I + L ++ F+ L+ +Y KC
Sbjct: 104 ANQSPSQFSLDEAYSSVLELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKC 163
Query: 72 GLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFA 131
G L DA ++FD P K ++ +MI +
Sbjct: 164 GC-------------------------------LVDAEKLFDGMPHKTIFTWNAMIGAYV 192
Query: 132 QNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVI 191
N +LE++R+MR+ G+ + T ++ + L +HGL IK V
Sbjct: 193 TNGEPLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRRCGAEVHGLAIKEGYVSIVF 252
Query: 192 ISTNLLNMYCVCSSLVEARSLFDEMKER-NIVSWNVMLNGFAKAGLVELARELFERIPSK 250
++ +++ MY C+ L AR LFD M E+ ++VSWN M++ ++ G
Sbjct: 253 VANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNG--------------- 297
Query: 251 DVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIH 310
+ EAL ++ M +APN V + AC + +G+ IH
Sbjct: 298 ----------------QSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIH 341
Query: 311 SIIVKAGFDCYDFIQATIIHFYAACGRI-NLARLQFELGIKDHIASWNALIAGFIRNGMI 369
+ ++K+ + F+ +I YA G++ A + + + D I SWN++++GF++NG+
Sbjct: 342 ATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTI-SWNSMLSGFVQNGLY 400
Query: 370 EDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAI 429
+A L+ +H M DAG KP+ + ++S+ A
Sbjct: 401 HEA-------------------------------LQFYHEMRDAGQKPDLVAVISIIAAS 429
Query: 430 ASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSP 489
A SG G H Y + N + + + +++DMYAK S+ +F + D+ V
Sbjct: 430 ARSGNTLNGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDK--DVVS 487
Query: 490 WNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMK 549
W II G A +G + L+++ +++ I L+ + +L C G + S+K
Sbjct: 488 WTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACS-------GLKLISSVK 540
Query: 550 SVYNV-----EPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLA 598
+++ DL +VD+ G G ++ A + + K DVV W ++++
Sbjct: 541 EIHSYIIRKGLSDLVLQNGIVDVYGECGNVDYAARMFELIEFK-DVVSWTSMIS 593
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 119/460 (25%), Positives = 201/460 (43%), Gaps = 74/460 (16%)
Query: 153 PNEVTLASVISSSVHLGG----IWECRMLHG-LVIKLMIDGFVIISTNLLNMYCVCSSLV 207
P++ +L SS + L G + E + +H ++ + V +ST L+ MY C LV
Sbjct: 108 PSQFSLDEAYSSVLELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCGCLV 167
Query: 208 EARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVER 267
+A LFD M P K + +W MI Y+
Sbjct: 168 DAEKLFDGM-------------------------------PHKTIFTWNAMIGAYVTNGE 196
Query: 268 LSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQAT 327
+L +YR M GI + ++ ACG G ++H + +K G+ F+ +
Sbjct: 197 PLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRRCGAEVHGLAIKEGYVSIVFVANS 256
Query: 328 IIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNM-QKRDVYS 386
I+ Y C +N ARQLF+ M +K DV S
Sbjct: 257 IVGMYTKCNDLN-------------------------------GARQLFDRMPEKEDVVS 285
Query: 387 WSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVL 446
W++MIS Y+ N Q AL LF M A + PN T V+ A S +K+G + H VL
Sbjct: 286 WNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVL 345
Query: 447 NNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLT 506
+S +N ++ A+I MYA+ G + A +FY++ D T WN+++ G +G +
Sbjct: 346 KSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDT--ISWNSMLSGFVQNGLYHEA 403
Query: 507 LKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGER-YFKSMKSVYNVEPDLKHYGCMV 565
L+ Y ++ K + + I +++ +G G + + +MK+ ++ DL+ +V
Sbjct: 404 LQFYHEMRDAGQKPDLVAVISIIAASARSGNTLNGMQIHAYAMKN--GLDSDLQVGNSLV 461
Query: 566 DLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGN 605
D+ + ++ + + MP K DVV W T++A +G+
Sbjct: 462 DMYAKFCSMKYMDCIFDKMPDK-DVVSWTTIIAGHAQNGS 500
>gi|15239979|ref|NP_201453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171133|sp|Q9FJY7.1|PP449_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g66520
gi|10177533|dbj|BAB10928.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332010841|gb|AED98224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 620
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 166/476 (34%), Positives = 263/476 (55%), Gaps = 11/476 (2%)
Query: 198 NMYCV--CSSLVEARSLFDEMKERNIVSWNVMLNGF-------AKAGLVELARELFERIP 248
M C+ CS E + + M + ++ + + F + + A+ +F+
Sbjct: 17 TMSCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFD 76
Query: 249 SKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQ 308
D W MI G+ + +L +Y+ MLC N L+ AC AF E Q
Sbjct: 77 RPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQ 136
Query: 309 IHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGM 368
IH+ I K G++ + ++I+ YA G LA L F+ + SWN++I G+++ G
Sbjct: 137 IHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGK 196
Query: 369 IEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCA 428
++ A LF M +++ SW+ MISGY Q + AL+LFH M ++ V+P+ +++ + A
Sbjct: 197 MDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSA 256
Query: 429 IASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVS 488
A G L++G+W H Y+ I ++ L +IDMYAKCG + A EVF +I+ + SV
Sbjct: 257 CAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKK--SVQ 314
Query: 489 PWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSM 548
W A+I G A HG + + +++K IK N ITF VL+ C + GLV+ G+ F SM
Sbjct: 315 AWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSM 374
Query: 549 KSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEV 608
+ YN++P ++HYGC+VDLLGRAG L++A+ I+ MP+K + VIWG LL A RIH N+E+
Sbjct: 375 ERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIEL 434
Query: 609 GERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
GE + L + P HG V +NI+A +W+ A R+ M++ G+ ++PG S +
Sbjct: 435 GEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTI 490
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 125/496 (25%), Positives = 217/496 (43%), Gaps = 68/496 (13%)
Query: 16 NLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLIS 75
+L+++ YE +S L+ CS + +QIH+ + K+GL +++ ++ IS
Sbjct: 9 SLEHNLYET--MSCLQRCSKQ---EELKQIHARMLKTGLMQDSYAITKFLSF-----CIS 58
Query: 76 QAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDC 135
S F P A I+ G+ R D + MI GF+ +D
Sbjct: 59 STSSDFL------PYA-QIVFDGFDRPDTF----------------LWNLMIRGFSCSDE 95
Query: 136 WREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTN 195
+L +++ M N T S++ + +L E +H + KL + V +
Sbjct: 96 PERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYENDVYAVNS 155
Query: 196 LLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSW 255
L+N Y V + A LFD + E + VSWN ++ G+ KAG +++A LF ++ K+ +SW
Sbjct: 156 LINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISW 215
Query: 256 GTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVK 315
TMI GY+Q + EAL ++ M + P++V + + +SAC + A +G IHS + K
Sbjct: 216 TTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNK 275
Query: 316 AGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQL 375
+ +I YA CG + A F+ K + +W ALI+G+ +G +A
Sbjct: 276 TRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISK 335
Query: 376 FNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTL 435
F MQK G+KPN IT +V A + +G +
Sbjct: 336 FMEMQK-------------------------------MGIKPNVITFTAVLTACSYTGLV 364
Query: 436 KEGRWAHEYVLNNSITLNDNLS--AAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAI 493
+EG+ Y + L + I+D+ + G ++ A + + +V W A+
Sbjct: 365 EEGKLIF-YSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVI-WGAL 422
Query: 494 ICGLAMHGDANLTLKI 509
+ +H + L +I
Sbjct: 423 LKACRIHKNIELGEEI 438
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 134/312 (42%), Gaps = 49/312 (15%)
Query: 16 NLQNSDYE---LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCG 72
+QNSD E ++L +AL C+ A+ QG+ IHS + K+ + ++ + LI++YAKCG
Sbjct: 237 EMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCG 296
Query: 73 LISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQ 132
+ +A EVF K ++T++I G+A
Sbjct: 297 -------------------------------EMEEALEVFKNIKKKSVQAWTALISGYAY 325
Query: 133 NDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRML-----HGLVIKLMID 187
+ REA+ F +M+ +G+ PN +T +V+++ + G + E +++ +K I+
Sbjct: 326 HGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIE 385
Query: 188 GFVIISTNLLNMYCVCSSLVEARSLFDEMK-ERNIVSWNVMLNGFAKAGLVELARELFER 246
+ I +++ L EA+ EM + N V W +L +EL E+ E
Sbjct: 386 HYGCI----VDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEI 441
Query: 247 IPSKDVVSWGTMIDG---YLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAF 303
+ + D G + + ++ +A R M G+A V IS G F
Sbjct: 442 LIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVA--KVPGCSTISLEGTTHEF 499
Query: 304 GEGLQIHSIIVK 315
G + H I K
Sbjct: 500 LAGDRSHPEIEK 511
>gi|147801171|emb|CAN62238.1| hypothetical protein VITISV_014689 [Vitis vinifera]
Length = 957
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 199/651 (30%), Positives = 321/651 (49%), Gaps = 100/651 (15%)
Query: 13 QKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCG 72
QKA+L + Y V+AL+ C + QG IH+ + KS N F+ N+LI +YA+ G
Sbjct: 274 QKASLAPNTY--TFVAALQACEDSSFIKQGMFIHATVLKSSYYINVFVANALIAMYARFG 331
Query: 73 LISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQ 132
+ +A ++F + D +S+ SM+ GF Q
Sbjct: 332 KMGEAANIFYNMDDWD-------------------------------TISWNSMLSGFVQ 360
Query: 133 NDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVII 192
N + EAL+ + +MR G P+ V + S+I++S G +H +K +D + +
Sbjct: 361 NGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLHGMQIHAYAMKNGLDSDLQV 420
Query: 193 STNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDV 252
+L++MY S+ +FD+M P KDV
Sbjct: 421 GNSLVDMYAKFCSMKYMDCIFDKM-------------------------------PDKDV 449
Query: 253 VSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSI 312
VSW T+I G+ Q S AL ++R + +GI + +MI ++ AC +IHS
Sbjct: 450 VSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSY 509
Query: 313 IVKAGFDCYDFI-QATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIED 371
I++ G D + Q I+ Y CG ++ A FEL
Sbjct: 510 IIRKGLS--DLVLQNGIVDVYGECGNVDYAARMFEL------------------------ 543
Query: 372 ARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIAS 431
++ +DV SW++MIS Y N N ALELFH M + GV+P+ I++VS+ A AS
Sbjct: 544 -------IEFKDVVSWTSMISCYVHNGLANEALELFHLMKETGVEPDSISLVSILSAAAS 596
Query: 432 SGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWN 491
LK+G+ H +++ L +L++ ++DMYA+CG++ + VF IR++ + W
Sbjct: 597 LSALKKGKEIHGFLIRKGFVLEGSLASTLVDMYARCGTLEKSRNVFNFIRNKDLVL--WT 654
Query: 492 AIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSV 551
++I MHG + ++ +E +I + I F+ VL C H+GL++ G R+ +SMK
Sbjct: 655 SMINAYGMHGCGRAAIDLFRRMEDESIAPDHIAFVAVLYACSHSGLMNEGRRFLESMKYE 714
Query: 552 YNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGER 611
Y +EP +HY C+VDLLGRA LE+A + ++ M ++ +W LL A +IH N E+GE
Sbjct: 715 YQLEPWPEHYACLVDLLGRANHLEEAYQFVKGMEVEPTAEVWCALLGACQIHSNKELGEI 774
Query: 612 AAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
AA+ L + P + + VL+SN+Y+ RW+D +R M+ G+K+ PG S
Sbjct: 775 AAQKLLEMDPENPGNYVLVSNVYSAERRWKDVEXVRMRMKASGLKKNPGCS 825
Score = 178 bits (452), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 145/594 (24%), Positives = 260/594 (43%), Gaps = 114/594 (19%)
Query: 15 ANLQNSDYEL--ALVSALRYCSAHIAVSQGQQIHS-LIFKSGLESNTFIQNSLINLYAKC 71
AN S + L A S L C + A+S+GQQ+H+ +I + L ++ F+ L+ +Y KC
Sbjct: 68 ANQSPSQFSLDEAYSSVLELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKC 127
Query: 72 GLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFA 131
G L DA ++FD P K ++ +MI +
Sbjct: 128 GC-------------------------------LVDAEKLFDGMPHKTIFTWNAMIGAYV 156
Query: 132 QNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVI 191
N +LE++R+MR+ G+ + T ++ + L +HGL IK V
Sbjct: 157 TNGEPLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRRYGAEVHGLAIKEGYVSIVF 216
Query: 192 ISTNLLNMYCVCSSLVEARSLFDEMKER-NIVSWNVMLNGFAKAGLVELARELFERIPSK 250
++ +++ MY C+ L AR LFD M E+ ++VSWN M++ ++ G
Sbjct: 217 VANSIVGMYTKCNDLNGARQLFDRMPEKEDVVSWNSMISAYSSNG--------------- 261
Query: 251 DVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIH 310
+ EAL ++ M +APN V + AC + +G+ IH
Sbjct: 262 ----------------QSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIH 305
Query: 311 SIIVKAGFDCYDFIQATIIHFYAACGRI-NLARLQFELGIKDHIASWNALIAGFIRNGMI 369
+ ++K+ + F+ +I YA G++ A + + + D I SWN++++GF++NG+
Sbjct: 306 ATVLKSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDTI-SWNSMLSGFVQNGLY 364
Query: 370 EDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAI 429
+A L+ +H M DAG KP+ + ++S+ A
Sbjct: 365 HEA-------------------------------LQFYHEMRDAGQKPDLVAVISIIAAS 393
Query: 430 ASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSP 489
A SG G H Y + N + + + +++DMYAK S+ +F + D+ V
Sbjct: 394 ARSGNTLHGMQIHAYAMKNGLDSDLQVGNSLVDMYAKFCSMKYMDCIFDKMPDK--DVVS 451
Query: 490 WNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMK 549
W II G A +G + L+++ +++ I L+ + +L C G + S+K
Sbjct: 452 WTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACS-------GLKLISSVK 504
Query: 550 SVYNV-----EPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLA 598
+++ DL +VD+ G G ++ A + + K DVV W ++++
Sbjct: 505 EIHSYIIRKGLSDLVLQNGIVDVYGECGNVDYAARMFELIEFK-DVVSWTSMIS 557
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 119/460 (25%), Positives = 201/460 (43%), Gaps = 74/460 (16%)
Query: 153 PNEVTLASVISSSVHLGG----IWECRMLHG-LVIKLMIDGFVIISTNLLNMYCVCSSLV 207
P++ +L SS + L G + E + +H ++ + V +ST L+ MY C LV
Sbjct: 72 PSQFSLDEAYSSVLELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRLVFMYGKCGCLV 131
Query: 208 EARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVER 267
+A LFD M P K + +W MI Y+
Sbjct: 132 DAEKLFDGM-------------------------------PHKTIFTWNAMIGAYVTNGE 160
Query: 268 LSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQAT 327
+L +YR M GI + ++ ACG G ++H + +K G+ F+ +
Sbjct: 161 PLGSLELYREMRVSGIPLDACTFPCILKACGLLKDRRYGAEVHGLAIKEGYVSIVFVANS 220
Query: 328 IIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNM-QKRDVYS 386
I+ Y C +N ARQLF+ M +K DV S
Sbjct: 221 IVGMYTKCNDLN-------------------------------GARQLFDRMPEKEDVVS 249
Query: 387 WSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVL 446
W++MIS Y+ N Q AL LF M A + PN T V+ A S +K+G + H VL
Sbjct: 250 WNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVL 309
Query: 447 NNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLT 506
+S +N ++ A+I MYA+ G + A +FY++ D T WN+++ G +G +
Sbjct: 310 KSSYYINVFVANALIAMYARFGKMGEAANIFYNMDDWDT--ISWNSMLSGFVQNGLYHEA 367
Query: 507 LKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGER-YFKSMKSVYNVEPDLKHYGCMV 565
L+ Y ++ K + + I +++ +G G + + +MK+ ++ DL+ +V
Sbjct: 368 LQFYHEMRDAGQKPDLVAVISIIAASARSGNTLHGMQIHAYAMKN--GLDSDLQVGNSLV 425
Query: 566 DLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGN 605
D+ + ++ + + MP K DVV W T++A +G+
Sbjct: 426 DMYAKFCSMKYMDCIFDKMPDK-DVVSWTTIIAGHAQNGS 464
>gi|227462996|gb|ACP39950.1| pentatricopeptide repeat protein [Gossypium hirsutum]
gi|227462998|gb|ACP39951.1| pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 532
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 176/476 (36%), Positives = 266/476 (55%), Gaps = 19/476 (3%)
Query: 203 CSSLVE---ARSLFDEMKERNIVSWNVMLNGFAKAGLVEL-----------ARELFERIP 248
C SL+E S +M IVS + L+ FA ++ L A +LF +P
Sbjct: 13 CLSLLEQCRTMSQIKQMHSHLIVSAS-RLDPFAAGKIISLFAVSSNADISHAYKLFLSLP 71
Query: 249 SKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQ 308
+ W T+I +++ + AL++Y+ ML G PN+ ++ AC G L
Sbjct: 72 HRTTFIWNTIIRIFVEKNENATALSLYKNMLQTGFLPNNYTFSFVLRACTDNSPVG--LA 129
Query: 309 IHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGM 368
H+ ++K G++ YDF+ +IH YA + AR F++ + +W ALI G++++G
Sbjct: 130 SHAQVIKLGWESYDFVLNGLIHLYANWSSVEAARKLFDVSTCRDVITWTALINGYVKSGH 189
Query: 369 IEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCA 428
+E AR+LF+ M +R+ SWSAMI+GY ALELF+ + G++PN +V A
Sbjct: 190 VEFARELFDQMPERNEVSWSAMITGYVHMGMFREALELFNDLQLTGLRPNHAGIVGALTA 249
Query: 429 IASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVS 488
+ G+L GRW H YV N L+ L A++DMYAKCG I A VF + D+
Sbjct: 250 CSYLGSLDHGRWIHAYVDRNGTELDRVLGTALVDMYAKCGCIEIACSVFEKMPDK--DAF 307
Query: 489 PWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSM 548
+ ++I GLA HG + ++++ ++ + N +TFI VLS C GLVD G R F M
Sbjct: 308 AFTSLISGLANHGQSADAIQLFGRMQSEKVIPNEVTFICVLSACSRMGLVDEGLRIFNCM 367
Query: 549 KSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEV 608
VY +EP ++HYGCMVDLLGRAG LE+A+ ++R MPM+ D + G LL + R+HG+VE+
Sbjct: 368 SVVYGIEPGVQHYGCMVDLLGRAGLLEEAKRLVREMPMEPDSYVLGALLNSCRVHGDVEL 427
Query: 609 GERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
G+ +SL HG VLLSN+YA + +W+ +RKEM +K++PG S +
Sbjct: 428 GKETVESLVERGLDHGGVHVLLSNMYASSNQWDWVVKVRKEMGAKKVKKVPGCSSI 483
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 109/385 (28%), Positives = 179/385 (46%), Gaps = 49/385 (12%)
Query: 65 INLYAKCGLISQAKSMFD----SCSTLDPVACNIMISGYI--RNDRLNDAREVFDKTPIK 118
++L +C +SQ K M S S LDP A +IS + N ++ A ++F P +
Sbjct: 14 LSLLEQCRTMSQIKQMHSHLIVSASRLDPFAAGKIISLFAVSSNADISHAYKLFLSLPHR 73
Query: 119 CCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVI-----SSSVHLGGIWE 173
+ ++I F + + AL ++++M G +PN T + V+ +S V L
Sbjct: 74 TTFIWNTIIRIFVEKNENATALSLYKNMLQTGFLPNNYTFSFVLRACTDNSPVGLAS--- 130
Query: 174 CRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAK 233
H VIKL + + + L+++Y SS+ AR LFD R++++W ++NG+ K
Sbjct: 131 ----HAQVIKLGWESYDFVLNGLIHLYANWSSVEAARKLFDVSTCRDVITWTALINGYVK 186
Query: 234 AGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDL 293
+G VE ARELF+++P ++ VSW MI GY+ + EAL ++ + G+ PN IV
Sbjct: 187 SGHVEFARELFDQMPERNEVSWSAMITGYVHMGMFREALELFNDLQLTGLRPNHAGIVGA 246
Query: 294 ISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHI 353
++AC + G IH+ + + G + + ++ YA CG I +A FE
Sbjct: 247 LTACSYLGSLDHGRWIHAYVDRNGTELDRVLGTALVDMYAKCGCIEIACSVFEKMPDKDA 306
Query: 354 ASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDA 413
++ +LI+G +G DA QLF MQ V
Sbjct: 307 FAFTSLISGLANHGQSADAIQLFGRMQSEKVI---------------------------- 338
Query: 414 GVKPNEITMVSVFCAIASSGTLKEG 438
PNE+T + V A + G + EG
Sbjct: 339 ---PNEVTFICVLSACSRMGLVDEG 360
Score = 135 bits (340), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 98/406 (24%), Positives = 187/406 (46%), Gaps = 66/406 (16%)
Query: 11 NSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAK 70
N + ++Y + V LR C+ + V G H+ + K G ES F+ N LI+LYA
Sbjct: 100 NMLQTGFLPNNYTFSFV--LRACTDNSPV--GLASHAQVIKLGWESYDFVLNGLIHLYAN 155
Query: 71 CGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGF 130
+ A+ +FD + D + +I+GY+++ + ARE+FD+ P + VS+++MI G+
Sbjct: 156 WSSVEAARKLFDVSTCRDVITWTALINGYVKSGHVEFARELFDQMPERNEVSWSAMITGY 215
Query: 131 AQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFV 190
+REALE+F D+++ G+ PN + +++ +LG + R +H V + +
Sbjct: 216 VHMGMFREALELFNDLQLTGLRPNHAGIVGALTACSYLGSLDHGRWIHAYVDRNGTELDR 275
Query: 191 IISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSK 250
++ T L++MY C + A S+F++M +++ ++ +++G A G A +LF R+ S+
Sbjct: 276 VLGTALVDMYAKCGCIEIACSVFEKMPDKDAFAFTSLISGLANHGQSADAIQLFGRMQSE 335
Query: 251 DVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIH 310
V+ PN+V + ++SAC R EGL+I
Sbjct: 336 KVI-------------------------------PNEVTFICVLSACSRMGLVDEGLRI- 363
Query: 311 SIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIE 370
F+C + GI+ + + ++ R G++E
Sbjct: 364 -------FNCMSVV----------------------YGIEPGVQHYGCMVDLLGRAGLLE 394
Query: 371 DARQLFNNM-QKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGV 415
+A++L M + D Y A+++ + + E +V+ G+
Sbjct: 395 EAKRLVREMPMEPDSYVLGALLNSCRVHGDVELGKETVESLVERGL 440
>gi|356518183|ref|XP_003527761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Glycine max]
Length = 1582
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 200/630 (31%), Positives = 317/630 (50%), Gaps = 108/630 (17%)
Query: 42 GQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIR 101
G+QIH ++ +SGL+ + N LIN+Y K G +S+A+++F + +D V+ N MISG
Sbjct: 925 GKQIHGIVVRSGLDQVVSVGNCLINMYVKTGSVSRARTVFWQMNEVDLVSWNTMISG--- 981
Query: 102 NDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASV 161
C +S +C ++ +F D+ G++P++ T+ASV
Sbjct: 982 -----------------CALS--------GLEEC---SVGMFVDLLRGGLLPDQFTVASV 1013
Query: 162 ISSSVHLGG-------IWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFD 214
+ + LGG I C M G+V+ D FV ST L+++Y + EA LF
Sbjct: 1014 LRACSSLGGGCHLATQIHACAMKAGVVL----DSFV--STTLIDVYSKSGKMEEAEFLF- 1066
Query: 215 EMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTM 274
V +GF D+ SW M+ GY+ +AL +
Sbjct: 1067 -----------VNQDGF-------------------DLASWNAMMHGYIVSGDFPKALRL 1096
Query: 275 YRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAA 334
Y M G N + + + A G + +G QI +++VK GF+ F+ + ++ Y
Sbjct: 1097 YILMQESGERANQITLANAAKAAGGLVGLKQGKQIQAVVVKRGFNLDLFVISGVLDMYLK 1156
Query: 335 CGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGY 394
CG + E AR++FN + D +W+ MISG
Sbjct: 1157 CGEM-------------------------------ESARRIFNEIPSPDDVAWTTMISGC 1185
Query: 395 AQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLND 454
+N Q AL +H M + V+P+E T ++ A + L++GR H + + +
Sbjct: 1186 VENGQEEHALFTYHHMRLSKVQPDEYTFATLVKACSLLTALEQGRQIHANTVKLNCAFDP 1245
Query: 455 NLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLE 514
+ +++DMYAKCG+I A +F R T+ ++ WNA+I GLA HG+A L+ + +++
Sbjct: 1246 FVMTSLVDMYAKCGNIEDARGLFK--RTNTSRIASWNAMIVGLAQHGNAEEALQFFEEMK 1303
Query: 515 KRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQL 574
R + + +TFIGVLS C H+GLV F SM+ +Y +EP+++HY C+VD L RAG++
Sbjct: 1304 SRGVTPDRVTFIGVLSACSHSGLVSEAYENFYSMQKIYGIEPEIEHYSCLVDALSRAGRI 1363
Query: 575 EDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIY 634
+AE+VI SMP +A ++ TLL A R+ + E G+R A+ L L+PS + VLLSN+Y
Sbjct: 1364 REAEKVISSMPFEASASMYRTLLNACRVQVDRETGKRVAEKLLALEPSDSAAYVLLSNVY 1423
Query: 635 ADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
A A +WE+ S R MR +K+ PGFS V
Sbjct: 1424 AAANQWENVASARNMMRKANVKKDPGFSWV 1453
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 143/631 (22%), Positives = 252/631 (39%), Gaps = 120/631 (19%)
Query: 28 SALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTL 87
S LR+ A + G++ H+ I SG + F+ N+LI +Y+KCG +S A
Sbjct: 631 SILRHAIAASDLPLGKRAHARILTSGHHPDRFLTNNLITMYSKCGSLSSA---------- 680
Query: 88 DPVACNIMISGYIRNDRLNDAREVFDKTP--IKCCVSYTSMIMGFAQNDCWREALEVFRD 145
R++FD TP + V++ +++ A D R+ +FR
Sbjct: 681 ---------------------RKLFDTTPDTSRDLVTWNAILSAHA--DKARDGFHLFRL 717
Query: 146 MRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSS 205
+R V TLA V + LHG +K+ + V ++ L+N+Y
Sbjct: 718 LRRSFVSATRHTLAPVFKMCLLSASPSAAESLHGYAVKIGLQWDVFVAGALVNIYAKFGR 777
Query: 206 LVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFER------------------- 246
+ EAR LFD M R++V WNVM+ + GL A LF
Sbjct: 778 IREARVLFDGMGLRDVVLWNVMMKAYVDTGLEYEALLLFSEFNRTGLRPDDVTLCTLARV 837
Query: 247 IPSK----------------------------DVVSWGTMIDGYLQVERLSEALTMYRAM 278
+ SK DV++W + +LQ EA+ + M
Sbjct: 838 VKSKQNVLEWQLKQLKAYGTKLFMYDDDDDGSDVIAWNKTLSWFLQRGETWEAVDCFVDM 897
Query: 279 LCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRI 338
+ +A + + V ++S G QIH I+V++G D + +I+ Y G +
Sbjct: 898 INSRVACDGLTFVVMLSVVAGLNCLELGKQIHGIVVRSGLDQVVSVGNCLINMYVKTGSV 957
Query: 339 NLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNE 398
+ AR F + + SWN +I+G +G+ E
Sbjct: 958 SRARTVFWQMNEVDLVSWNTMISGCALSGLEE---------------------------- 989
Query: 399 QPNMALELFHGMVDAGVKPNEITMVSVFCAIAS-SGTLKEGRWAHEYVLNNSITLNDNLS 457
++ +F ++ G+ P++ T+ SV A +S G H + + L+ +S
Sbjct: 990 ---CSVGMFVDLLRGGLLPDQFTVASVLRACSSLGGGCHLATQIHACAMKAGVVLDSFVS 1046
Query: 458 AAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRN 517
+ID+Y+K G + A F + ++ WNA++ G + GD L++Y +++
Sbjct: 1047 TTLIDVYSKSGKMEEA--EFLFVNQDGFDLASWNAMMHGYIVSGDFPKALRLYILMQESG 1104
Query: 518 IKLNSITFIGVLSTCCHAGLVDLGE-RYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLED 576
+ N IT GLV L + + +++ DL ++D+ + G++E
Sbjct: 1105 ERANQITLANAAKAA--GGLVGLKQGKQIQAVVVKRGFNLDLFVISGVLDMYLKCGEMES 1162
Query: 577 AEEVIRSMPMKADVVIWGTLLAASRIHGNVE 607
A + +P DV W T+++ +G E
Sbjct: 1163 ARRIFNEIPSPDDVA-WTTMISGCVENGQEE 1192
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 112/463 (24%), Positives = 193/463 (41%), Gaps = 109/463 (23%)
Query: 23 ELALVSALRYCSA-----HIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQA 77
+ + S LR CS+ H+A QIH+ K+G+ ++F+ +LI++Y+K G + +A
Sbjct: 1007 QFTVASVLRACSSLGGGCHLAT----QIHACAMKAGVVLDSFVSTTLIDVYSKSGKMEEA 1062
Query: 78 KSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWR 137
+ +F + D + N M+ GYI V P
Sbjct: 1063 EFLFVNQDGFDLASWNAMMHGYI----------VSGDFP--------------------- 1091
Query: 138 EALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIK--LMIDGFVIISTN 195
+AL ++ M+ G N++TLA+ ++ L G+ + + + +V+K +D FVI +
Sbjct: 1092 KALRLYILMQESGERANQITLANAAKAAGGLVGLKQGKQIQAVVVKRGFNLDLFVI--SG 1149
Query: 196 LLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSW 255
+L+MY C + AR +F+E+ + V+W M++G + G E
Sbjct: 1150 VLDMYLKCGEMESARRIFNEIPSPDDVAWTTMISGCVENGQEE----------------- 1192
Query: 256 GTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVK 315
AL Y M + P++ L+ AC A +G QIH+ VK
Sbjct: 1193 --------------HALFTYHHMRLSKVQPDEYTFATLVKACSLLTALEQGRQIHANTVK 1238
Query: 316 AGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQL 375
F+ +++ YA CG I AR F+ IASWNA+I G ++G E+A Q
Sbjct: 1239 LNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTSRIASWNAMIVGLAQHGNAEEALQF 1298
Query: 376 FNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTL 435
F M+ R GV P+ +T + V A + SG +
Sbjct: 1299 FEEMKSR-------------------------------GVTPDRVTFIGVLSACSHSGLV 1327
Query: 436 KEGRWAHEYVLNNSITLNDNLS--AAIIDMYAKCGSINTAFEV 476
E + + Y + + + + ++D ++ G I A +V
Sbjct: 1328 SEA-YENFYSMQKIYGIEPEIEHYSCLVDALSRAGRIREAEKV 1369
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 85/359 (23%), Positives = 151/359 (42%), Gaps = 96/359 (26%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
++ L +A + + + QG+QI +++ K G + F+ + ++++Y KCG + A+ +F+
Sbjct: 1109 QITLANAAKAAGGLVGLKQGKQIQAVVVKRGFNLDLFVISGVLDMYLKCGEMESARRIFN 1168
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+ D VA MISG CV +N AL
Sbjct: 1169 EIPSPDDVAWTTMISG---------------------CV----------ENGQEEHALFT 1197
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKL--MIDGFVIISTNLLNMY 200
+ MR+ V P+E T A+++ + L + + R +H +KL D FV+ T+L++MY
Sbjct: 1198 YHHMRLSKVQPDEYTFATLVKACSLLTALEQGRQIHANTVKLNCAFDPFVM--TSLVDMY 1255
Query: 201 CVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMID 260
C ++ +AR LF I SWN M+ G A+ G E A + FE + S+
Sbjct: 1256 AKCGNIEDARGLFKRTNTSRIASWNAMIVGLAQHGNAEEALQFFEEMKSR---------- 1305
Query: 261 GYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDC 320
G+ P+ V + ++SAC HS +V ++
Sbjct: 1306 ---------------------GVTPDRVTFIGVLSACS-----------HSGLVSEAYE- 1332
Query: 321 YDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNM 379
+FY+ +Q GI+ I ++ L+ R G I +A ++ ++M
Sbjct: 1333 ---------NFYS---------MQKIYGIEPEIEHYSCLVDALSRAGRIREAEKVISSM 1373
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 78/171 (45%), Gaps = 36/171 (21%)
Query: 7 HSVFNSQKANL---QNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNS 63
H++F L Q +Y A + ++ CS A+ QG+QIH+ K + F+ S
Sbjct: 1193 HALFTYHHMRLSKVQPDEYTFATL--VKACSLLTALEQGRQIHANTVKLNCAFDPFVMTS 1250
Query: 64 LINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSY 123
L+++YAKCG I A+ +F R N +R S+
Sbjct: 1251 LVDMYAKCGNIEDARGLF---------------------KRTNTSR----------IASW 1279
Query: 124 TSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWEC 174
+MI+G AQ+ EAL+ F +M+ GV P+ VT V+S+ H G + E
Sbjct: 1280 NAMIVGLAQHGNAEEALQFFEEMKSRGVTPDRVTFIGVLSACSHSGLVSEA 1330
>gi|147799543|emb|CAN68467.1| hypothetical protein VITISV_029899 [Vitis vinifera]
Length = 613
Score = 320 bits (819), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 178/432 (41%), Positives = 257/432 (59%), Gaps = 18/432 (4%)
Query: 237 VELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCD-GIAPNDVMIVDLIS 295
++ AR++F + + S+ T+I + +AL ++ M+ D + PN +
Sbjct: 38 LDYARKIFRSMHRPNCFSYNTLIRALSESNDPCDALLVFIEMVEDCSVEPNCFTFPSVFK 97
Query: 296 ACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFEL-------- 347
ACGRA EG Q+H + VK G D +F+ + ++ Y +CG + A F
Sbjct: 98 ACGRAERLREGRQVHGLAVKFGLDSDEFVVSNVVRMYLSCGVMEDAHRLFYRRVFVDGCD 157
Query: 348 GIKDH-------IASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQP 400
GI+D + WN +I G++R G +E AR LF+ M +R V SW+ MI+GYAQ+
Sbjct: 158 GIRDKKRRVDGDVVLWNVMIDGYVRIGELEVARNLFDEMPQRSVVSWNVMIAGYAQSGHF 217
Query: 401 NMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAI 460
A+E+F M A V PN +T+VSV A++ G L+ G+W H Y + N+I ++D L +A+
Sbjct: 218 KEAVEVFREMQMAEVPPNYVTLVSVLPAMSRLGALELGKWVHLYAVRNNIGVDDVLGSAL 277
Query: 461 IDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKL 520
IDMYAKCGSI A +VF + R +V W+ II GLAMHG A TL + D+E+ +
Sbjct: 278 IDMYAKCGSIEKALQVFEGLPKR--NVVTWSTIIAGLAMHGRAKDTLDHFEDMERAGVMP 335
Query: 521 NSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEV 580
+ +T+IG+LS C HAGLV+ G +F M V +EP ++HYGCMVDLLGRAG LE++EE+
Sbjct: 336 SDVTYIGLLSACSHAGLVNEGRWFFDHMVRVSGLEPRIEHYGCMVDLLGRAGLLEESEEL 395
Query: 581 IRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRW 640
I +MP+K D VIW LL A ++HGNVE+G+R A+ L L P S V LSNIYA G W
Sbjct: 396 ILNMPIKPDDVIWKALLGACKMHGNVEMGKRVAEHLMELAPHDSGSYVALSNIYASLGNW 455
Query: 641 EDAFSIRKEMRD 652
E +R M++
Sbjct: 456 EGVAKVRLMMKE 467
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 116/454 (25%), Positives = 209/454 (46%), Gaps = 51/454 (11%)
Query: 79 SMFDSCSTLDPVACNIMISGYIRNDR--LNDAREVFDKTPIKCCVSYTSMIMGFAQNDCW 136
M + DP+A ++ +D L+ AR++F C SY ++I ++++
Sbjct: 10 QMIKTAQIRDPLAAAELLRFSAVSDHRDLDYARKIFRSMHRPNCFSYNTLIRALSESNDP 69
Query: 137 REALEVFRDM-RILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTN 195
+AL VF +M V PN T SV + + E R +HGL +K +D + +N
Sbjct: 70 CDALLVFIEMVEDCSVEPNCFTFPSVFKACGRAERLREGRQVHGLAVKFGLDSDEFVVSN 129
Query: 196 LLNMYCVCSSLVEARSLF---------DEMKER------NIVSWNVMLNGFAKAGLVELA 240
++ MY C + +A LF D ++++ ++V WNVM++G+ + G +E+A
Sbjct: 130 VVRMYLSCGVMEDAHRLFYRRVFVDGCDGIRDKKRRVDGDVVLWNVMIDGYVRIGELEVA 189
Query: 241 RELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRA 300
R LF+ +P + VVSW MI GY Q EA+ ++R M + PN V +V ++ A R
Sbjct: 190 RNLFDEMPQRSVVSWNVMIAGYAQSGHFKEAVEVFREMQMAEVPPNYVTLVSVLPAMSRL 249
Query: 301 MAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALI 360
A G +H V+ D + + +I YA CG I A FE K ++ +W+ +I
Sbjct: 250 GALELGKWVHLYAVRNNIGVDDVLGSALIDMYAKCGSIEKALQVFEGLPKRNVVTWSTII 309
Query: 361 AGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEI 420
AG +G +D F +M++ AGV P+++
Sbjct: 310 AGLAMHGRAKDTLDHFEDMER-------------------------------AGVMPSDV 338
Query: 421 TMVSVFCAIASSGTLKEGRWAHEYVLNNS-ITLNDNLSAAIIDMYAKCGSINTAFEVFYH 479
T + + A + +G + EGRW ++++ S + ++D+ + G + + E+ +
Sbjct: 339 TYIGLLSACSHAGLVNEGRWFFDHMVRVSGLEPRIEHYGCMVDLLGRAGLLEESEELILN 398
Query: 480 IRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDL 513
+ + V W A++ MHG+ + ++ L
Sbjct: 399 MPIKPDDVI-WKALLGACKMHGNVEMGKRVAEHL 431
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 146/294 (49%), Gaps = 46/294 (15%)
Query: 28 SALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMF------ 81
S + C + +G+Q+H L K GL+S+ F+ ++++ +Y CG++ A +F
Sbjct: 94 SVFKACGRAERLREGRQVHGLAVKFGLDSDEFVVSNVVRMYLSCGVMEDAHRLFYRRVFV 153
Query: 82 DSCSTL---------DPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQ 132
D C + D V N+MI GY+R L AR +FD+ P + VS+ MI G+AQ
Sbjct: 154 DGCDGIRDKKRRVDGDVVLWNVMIDGYVRIGELEVARNLFDEMPQRSVVSWNVMIAGYAQ 213
Query: 133 NDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVII 192
+ ++EA+EVFR+M++ V PN VTL SV+ + LG + + +H ++ I ++
Sbjct: 214 SGHFKEAVEVFREMQMAEVPPNYVTLVSVLPAMSRLGALELGKWVHLYAVRNNIGVDDVL 273
Query: 193 STNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDV 252
+ L++MY C S+ +A +F+ + +RN+V+W+ ++ G A G
Sbjct: 274 GSALIDMYAKCGSIEKALQVFEGLPKRNVVTWSTIIAGLAMHG----------------- 316
Query: 253 VSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEG 306
R + L + M G+ P+DV + L+SAC A EG
Sbjct: 317 --------------RAKDTLDHFEDMERAGVMPSDVTYIGLLSACSHAGLVNEG 356
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 70/152 (46%), Gaps = 31/152 (20%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+ LVS L S A+ G+ +H ++ + + + ++LI++YAKCG I +A +F+
Sbjct: 237 VTLVSVLPAMSRLGALELGKWVHLYAVRNNIGVDDVLGSALIDMYAKCGSIEKALQVFEG 296
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
P + V+++++I G A + ++ L+ F
Sbjct: 297 -------------------------------LPKRNVVTWSTIIAGLAMHGRAKDTLDHF 325
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECR 175
DM GV+P++VT ++S+ H G + E R
Sbjct: 326 EDMERAGVMPSDVTYIGLLSACSHAGLVNEGR 357
>gi|413924746|gb|AFW64678.1| hypothetical protein ZEAMMB73_926861 [Zea mays]
Length = 655
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 163/428 (38%), Positives = 256/428 (59%), Gaps = 4/428 (0%)
Query: 225 NVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIA 284
+ +A G V R++F+ + +DVVSWG M+D Y Q EAL ++ M G+
Sbjct: 189 TALAGAYAACGCVRDTRKVFDGMAVRDVVSWGVMLDSYCQTRNYKEALLLFAKMKNSGVV 248
Query: 285 PNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLA-RL 343
P+ +++ ++ ACG G IHS ++ + I + +I YA+C + +A +L
Sbjct: 249 PDQLILATVLPACGHIRHLRIGKAIHSYMLVSDMIIGAHISSALISLYASCANMEMAEKL 308
Query: 344 QFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMA 403
E+ KD ++S A+++G+ RN +E AR +F+ M ++DV SWSAMISGY + QPN A
Sbjct: 309 YNEMPRKDLVSS-TAMVSGYARNRKVEIARSIFDGMPEKDVVSWSAMISGYVDSNQPNEA 367
Query: 404 LELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDM 463
L LF+GM + G++ +EITM+SV A A+ G+L + +W H ++ N+ + ++ A+IDM
Sbjct: 368 LSLFNGMQECGIRSDEITMLSVISACANLGSLDKAKWIHAFIKNSGLNKVLHICNALIDM 427
Query: 464 YAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSI 523
+AKCG IN A VF + +V W ++I AMHGD +L+++ ++ + N +
Sbjct: 428 FAKCGGINLALNVFNEM--PLKNVITWTSMISAFAMHGDGKSSLRLFEQMKDEGAEPNEV 485
Query: 524 TFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRS 583
TF+ +L CCHAGLV G F SM Y +EP +HYGCMVDLLGRA +++A +I S
Sbjct: 486 TFLSLLYACCHAGLVHEGRLLFSSMVQQYGIEPKHEHYGCMVDLLGRAKLMQEAVSLIES 545
Query: 584 MPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDA 643
M ++ +V IWG+LLAA +HG++++G AAK + L P+H + VLL IY + +A
Sbjct: 546 MHLEPNVPIWGSLLAACWMHGDLKLGAFAAKKILQLDPNHDGASVLLLKIYMKSDNLNNA 605
Query: 644 FSIRKEMR 651
+R M+
Sbjct: 606 QEVRGVMK 613
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 121/463 (26%), Positives = 221/463 (47%), Gaps = 68/463 (14%)
Query: 46 HSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRL 105
H+L ++G + F+ +L YA CG +
Sbjct: 173 HALAVRTGALDDGFVGTALAGAYAACGCV------------------------------- 201
Query: 106 NDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSS 165
D R+VFD ++ VS+ M+ + Q ++EAL +F M+ GV+P+++ LA+V+ +
Sbjct: 202 RDTRKVFDGMAVRDVVSWGVMLDSYCQTRNYKEALLLFAKMKNSGVVPDQLILATVLPAC 261
Query: 166 VHLGGIWECRMLHG-LVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSW 224
H+ + + +H +++ MI G IS+ L+++Y C+++ A L++EM +++VS
Sbjct: 262 GHIRHLRIGKAIHSYMLVSDMIIG-AHISSALISLYASCANMEMAEKLYNEMPRKDLVSS 320
Query: 225 NVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIA 284
M++G+A+ VE+AR +F+ +P KDVVSW MI GY+ + +EAL+++ M GI
Sbjct: 321 TAMVSGYARNRKVEIARSIFDGMPEKDVVSWSAMISGYVDSNQPNEALSLFNGMQECGIR 380
Query: 285 PNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQ 344
+++ ++ +ISAC + + IH+ I +G + I +I +A CG INLA
Sbjct: 381 SDEITMLSVISACANLGSLDKAKWIHAFIKNSGLNKVLHICNALIDMFAKCGGINLALNV 440
Query: 345 F-ELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMA 403
F E+ +K+ + +W ++I+ F +G D + +
Sbjct: 441 FNEMPLKN-VITWTSMISAFAMHG---DGKS----------------------------S 468
Query: 404 LELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNN-SITLNDNLSAAIID 462
L LF M D G +PNE+T +S+ A +G + EGR ++ I ++D
Sbjct: 469 LRLFEQMKDEGAEPNEVTFLSLLYACCHAGLVHEGRLLFSSMVQQYGIEPKHEHYGCMVD 528
Query: 463 MYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANL 505
+ + + A + + +V W +++ MHGD L
Sbjct: 529 LLGRAKLMQEAVSLIESMH-LEPNVPIWGSLLAACWMHGDLKL 570
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 85/304 (27%), Positives = 152/304 (50%), Gaps = 34/304 (11%)
Query: 15 ANLQNSDY---ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKC 71
A ++NS +L L + L C + G+ IHS + S + I ++LI+LYA C
Sbjct: 240 AKMKNSGVVPDQLILATVLPACGHIRHLRIGKAIHSYMLVSDMIIGAHISSALISLYASC 299
Query: 72 GLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFA 131
+ A+ +++ D V+ M+SGY RN ++ AR +FD P K VS+++MI G+
Sbjct: 300 ANMEMAEKLYNEMPRKDLVSSTAMVSGYARNRKVEIARSIFDGMPEKDVVSWSAMISGYV 359
Query: 132 QNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVI 191
++ EAL +F M+ G+ +E+T+ SVIS+ +LG + + + +H + ++ +
Sbjct: 360 DSNQPNEALSLFNGMQECGIRSDEITMLSVISACANLGSLDKAKWIHAFIKNSGLNKVLH 419
Query: 192 ISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKD 251
I L++M+ C + A ++F+EM +N+++W M++ FA G + + LFE++ KD
Sbjct: 420 ICNALIDMFAKCGGINLALNVFNEMPLKNVITWTSMISAFAMHGDGKSSLRLFEQM--KD 477
Query: 252 VVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHS 311
+G PN+V + L+ AC A EG + S
Sbjct: 478 -----------------------------EGAEPNEVTFLSLLYACCHAGLVHEGRLLFS 508
Query: 312 IIVK 315
+V+
Sbjct: 509 SMVQ 512
>gi|222637368|gb|EEE67500.1| hypothetical protein OsJ_24934 [Oryza sativa Japonica Group]
Length = 830
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 187/590 (31%), Positives = 312/590 (52%), Gaps = 16/590 (2%)
Query: 86 TLDPVACNIMISGYIRNDRLNDAREVFDKTPI--KCCVSYTSMIMGFAQNDCWREALEVF 143
T P +++ RL DA FD P + V + +M+ FA+ A+ VF
Sbjct: 89 TRAPSPATSLVAAQAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSVF 148
Query: 144 RDMRILGVI-PNEVTLASVISS--SVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMY 200
+ G + P++ + ++IS+ +H C LH V+K + +S L+ +Y
Sbjct: 149 HALLGSGSLRPDDYSFTALISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLSVSNALIALY 208
Query: 201 CVCSSLV---EARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGT 257
C + +AR + DEM +++ ++W M+ G+ + G V AR +FE + K V W
Sbjct: 209 MKCDTPEASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNA 268
Query: 258 MIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVK-- 315
MI GY+Q ++A ++R M+ + + ++ ++SAC A F G +H I++
Sbjct: 269 MISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQ 328
Query: 316 AGF--DCYDFIQATIIHFYAACGRINLARLQFE-LGIKDHIASWNALIAGFIRNGMIEDA 372
F + + ++ Y+ G+I +A+ F+ + +KD + SWN +++G+I +G ++ A
Sbjct: 329 PNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLKD-VVSWNTILSGYIDSGCLDKA 387
Query: 373 RQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASS 432
++F M ++ SW M+SGY AL+LF+ M VKP + T A
Sbjct: 388 VEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGEL 447
Query: 433 GTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNA 492
G LK GR H +++ +++ A++ MYAKCG++N A VF + SVS WNA
Sbjct: 448 GALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFL-VMPNLDSVS-WNA 505
Query: 493 IICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVY 552
+I L HG L+++ + I + I+F+ +L+ C HAGLVD G YF+SMK +
Sbjct: 506 MISALGQHGHGREALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFHYFESMKRDF 565
Query: 553 NVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERA 612
+ P HY ++DLLGR+G++ +A ++I++MP + IW +L+ R +G++E G A
Sbjct: 566 GISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCRTNGDMEFGAYA 625
Query: 613 AKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
A L + P H + +LLSN Y+ AGRW DA +RK MRD G+K+ PG S
Sbjct: 626 ADQLFRMIPQHDGTYILLSNTYSAAGRWVDAARVRKLMRDRGVKKEPGCS 675
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 150/540 (27%), Positives = 258/540 (47%), Gaps = 45/540 (8%)
Query: 6 FHSVFNSQKANLQNSDYEL-ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSL 64
FH++ S +L+ DY AL+SA+ ++A Q+H + KSG + + N+L
Sbjct: 148 FHALLGS--GSLRPDDYSFTALISAVGQMH-NLAAPHCTQLHCSVLKSGAAAVLSVSNAL 204
Query: 65 INLYAKCGLIS---QAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCV 121
I LY KC A+ + D D + M+ GY+R +N AR VF++ K V
Sbjct: 205 IALYMKCDTPEASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDV 264
Query: 122 SYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLV 181
+ +MI G+ Q+ +A E+FR M V +E T SV+S+ + G + +HG +
Sbjct: 265 VWNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQI 324
Query: 182 IKL----MIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLV 237
I+L + + + ++ L+ +Y +V A+ +FD M +++VSWN +L+G+ +G +
Sbjct: 325 IRLQPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCL 384
Query: 238 ELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISAC 297
+ A E+F+ +P K+ +SW M+ GY+ +AL ++ M + + P D I+AC
Sbjct: 385 DKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAAC 444
Query: 298 GRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWN 357
G A G Q+H+ +V+ GF+ + ++ YA CG +N ARL F + SWN
Sbjct: 445 GELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWN 504
Query: 358 ALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKP 417
A+I+ ++G + ALELF MV G+ P
Sbjct: 505 AMISALGQHGHGRE-------------------------------ALELFDQMVAEGIDP 533
Query: 418 NEITMVSVFCAIASSGTLKEGRWAHEYVLNN-SITLNDNLSAAIIDMYAKCGSINTAFEV 476
+ I+ +++ A +G + EG E + + I+ ++ A +ID+ + G I A ++
Sbjct: 534 DRISFLTILTACNHAGLVDEGFHYFESMKRDFGISPGEDHYARLIDLLGRSGRIGEARDL 593
Query: 477 FYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAG 536
+ T S W AI+ G +GD +D R I + T+I + +T AG
Sbjct: 594 IKTMPFEPTP-SIWEAILSGCRTNGDMEFG-AYAADQLFRMIPQHDGTYILLSNTYSAAG 651
>gi|356544234|ref|XP_003540559.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial-like [Glycine max]
Length = 916
Score = 319 bits (818), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 192/645 (29%), Positives = 322/645 (49%), Gaps = 97/645 (15%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E S L C+ + G+Q+HS I K SN F+ N+LI++YAK G + +A F+
Sbjct: 318 EFTYTSILSTCACFEYLEVGRQLHSAIIKKRFTSNLFVNNALIDMYAKAGALKEAGKHFE 377
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+ D + S+ ++I+G+ Q + A +
Sbjct: 378 HMTYRDHI-------------------------------SWNAIIVGYVQEEVEAGAFSL 406
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
FR M + G++P+EV+LAS++S+ ++ + + H L +KL ++ + ++L++MY
Sbjct: 407 FRRMILDGIVPDEVSLASILSACGNIKVLEAGQQFHCLSVKLGLETNLFAGSSLIDMYSK 466
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
C G ++ A + + +P + VVS +I GY
Sbjct: 467 C-------------------------------GDIKDAHKTYSSMPERSVVSVNALIAGY 495
Query: 263 LQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDC-Y 321
++ E++ + M G+ P+++ LI C + GLQIH IVK G C
Sbjct: 496 -ALKNTKESINLLHEMQILGLKPSEITFASLIDVCKGSAKVILGLQIHCAIVKRGLLCGS 554
Query: 322 DFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQK 381
+F+ +++ Y R+ DA LF+
Sbjct: 555 EFLGTSLLGMYMDSQRL-------------------------------ADANILFSEFSS 583
Query: 382 -RDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRW 440
+ + W+A+ISG+ QNE ++AL L+ M D + P++ T V+V A A +L +GR
Sbjct: 584 LKSIVMWTALISGHIQNECSDVALNLYREMRDNNISPDQATFVTVLQACALLSSLHDGRE 643
Query: 441 AHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMH 500
H + + L++ S+A++DMYAKCG + ++ +VF + + +S WN++I G A +
Sbjct: 644 IHSLIFHTGFDLDELTSSALVDMYAKCGDVKSSVQVFEELATKKDVIS-WNSMIVGFAKN 702
Query: 501 GDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKH 560
G A LK++ ++ + I + +TF+GVL+ C HAG V G + F M + Y +EP + H
Sbjct: 703 GYAKCALKVFDEMTQSCITPDDVTFLGVLTACSHAGWVYEGRQIFDVMVNYYGIEPRVDH 762
Query: 561 YGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQ 620
Y CMVDLLGR G L++AEE I + ++ + +IW LL A RIHG+ + G+RAAK L L+
Sbjct: 763 YACMVDLLGRWGFLKEAEEFIDKLEVEPNAMIWANLLGACRIHGDEKRGQRAAKKLIELE 822
Query: 621 PSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGVV 665
P VLLSN+YA +G W++A S+R+ M ++++PG S +V
Sbjct: 823 PQSSSPYVLLSNMYAASGNWDEARSLRRTMIKKDIQKIPGCSWIV 867
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 152/573 (26%), Positives = 252/573 (43%), Gaps = 109/573 (19%)
Query: 10 FNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYA 69
F + N +S + L C+ + G+ +HS + KSGLES +F Q +LI+LYA
Sbjct: 34 FYASFMNSGHSPDQFTFAVTLSACAKLQNLHLGRAVHSCVIKSGLESTSFCQGALIHLYA 93
Query: 70 KCGLISQAKSMFDSC--STLDPVACNIMISGYIRNDRLNDAREVFDK------------- 114
KC ++ A+++F S L V+ +ISGY++ ++A +FDK
Sbjct: 94 KCNSLTCARTIFASAPFPHLHTVSWTALISGYVQAGLPHEALHIFDKMRNSAVPDQVALV 153
Query: 115 -----------------------TPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGV 151
PI+ V++ MI G A+ + EAL F M GV
Sbjct: 154 TVLNAYISLGKLDDACQLFQQMPIPIRNVVAWNVMISGHAKTAHYEEALAFFHQMSKHGV 213
Query: 152 IPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARS 211
+ TLASV+S+ L + ++H IK + + ++++L+NMY C +AR
Sbjct: 214 KSSRSTLASVLSAIASLAALNHGLLVHAHAIKQGFESSIYVASSLINMYGKCQMPDDARQ 273
Query: 212 LFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEA 271
+FD + ++N++ WN ML +++ G LS
Sbjct: 274 VFDAISQKNMIVWNAMLGVYSQNGF-------------------------------LSNV 302
Query: 272 LTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHF 331
+ ++ M+ GI P++ ++S C G Q+HS I+K F F+ +I
Sbjct: 303 MELFLDMISCGIHPDEFTYTSILSTCACFEYLEVGRQLHSAIIKKRFTSNLFVNNALIDM 362
Query: 332 YAACGRINLARLQFE-LGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAM 390
YA G + A FE + +DHI SWNA+I G
Sbjct: 363 YAKAGALKEAGKHFEHMTYRDHI-SWNAIIVG---------------------------- 393
Query: 391 ISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSI 450
Y Q E A LF M+ G+ P+E+++ S+ A + L+ G+ H L+ +
Sbjct: 394 ---YVQEEVEAGAFSLFRRMILDGIVPDEVSLASILSACGNIKVLEAGQQFH--CLSVKL 448
Query: 451 TLNDNLSA--AIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLK 508
L NL A ++IDMY+KCG I A + + + +R SV NA+I G A+ + ++
Sbjct: 449 GLETNLFAGSSLIDMYSKCGDIKDAHKTYSSMPER--SVVSVNALIAGYALK-NTKESIN 505
Query: 509 IYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLG 541
+ +++ +K + ITF ++ C + V LG
Sbjct: 506 LLHEMQILGLKPSEITFASLIDVCKGSAKVILG 538
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 120/514 (23%), Positives = 221/514 (42%), Gaps = 78/514 (15%)
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
G P++ T A +S+ L + R +H VIK ++ L+++Y C+SL A
Sbjct: 42 GHSPDQFTFAVTLSACAKLQNLHLGRAVHSCVIKSGLESTSFCQGALIHLYAKCNSLTCA 101
Query: 210 RSLFDE--MKERNIVSWNVMLNGFAKAGLVELARELFER--------------------- 246
R++F + VSW +++G+ +AGL A +F++
Sbjct: 102 RTIFASAPFPHLHTVSWTALISGYVQAGLPHEALHIFDKMRNSAVPDQVALVTVLNAYIS 161
Query: 247 ---------------IPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIV 291
IP ++VV+W MI G+ + EAL + M G+ + +
Sbjct: 162 LGKLDDACQLFQQMPIPIRNVVAWNVMISGHAKTAHYEEALAFFHQMSKHGVKSSRSTLA 221
Query: 292 DLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKD 351
++SA A GL +H+ +K GF+ ++ +++I+ Y C + AR F+ +
Sbjct: 222 SVLSAIASLAALNHGLLVHAHAIKQGFESSIYVASSLINMYGKCQMPDDARQVFDAISQK 281
Query: 352 HIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMV 411
++ WNA++ + +NG + + +ELF M+
Sbjct: 282 NMIVWNAMLGVYSQNGFLSN-------------------------------VMELFLDMI 310
Query: 412 DAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSIN 471
G+ P+E T S+ A L+ GR H ++ T N ++ A+IDMYAK G++
Sbjct: 311 SCGIHPDEFTYTSILSTCACFEYLEVGRQLHSAIIKKRFTSNLFVNNALIDMYAKAGALK 370
Query: 472 TAFEVFYHI--RDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVL 529
A + F H+ RD + WNAII G ++ + I + ++ +L
Sbjct: 371 EAGKHFEHMTYRDHIS----WNAIIVGYVQEEVEAGAFSLFRRMILDGIVPDEVSLASIL 426
Query: 530 STCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKAD 589
S C + +++ G++ F + +E +L ++D+ + G ++DA + SMP ++
Sbjct: 427 SACGNIKVLEAGQQ-FHCLSVKLGLETNLFAGSSLIDMYSKCGDIKDAHKTYSSMPERS- 484
Query: 590 VVIWGTLLAASRIHGNVE-VGERAAKSLAGLQPS 622
VV L+A + E + + GL+PS
Sbjct: 485 VVSVNALIAGYALKNTKESINLLHEMQILGLKPS 518
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 100/398 (25%), Positives = 174/398 (43%), Gaps = 48/398 (12%)
Query: 252 VVSWGTMIDG--YLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQI 309
V W + G + ER+ L Y + + G +P+ +SAC + G +
Sbjct: 13 VRQWNWRVQGTKHYSSERV---LQFYASFMNSGHSPDQFTFAVTLSACAKLQNLHLGRAV 69
Query: 310 HSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHI--ASWNALIAGFIRNG 367
HS ++K+G + F Q +IH YA C + AR F H+ SW ALI+G+++ G
Sbjct: 70 HSCVIKSGLESTSFCQGALIHLYAKCNSLTCARTIFASAPFPHLHTVSWTALISGYVQAG 129
Query: 368 MIEDARQLFNNMQK------------------------------------RDVYSWSAMI 391
+ +A +F+ M+ R+V +W+ MI
Sbjct: 130 LPHEALHIFDKMRNSAVPDQVALVTVLNAYISLGKLDDACQLFQQMPIPIRNVVAWNVMI 189
Query: 392 SGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSIT 451
SG+A+ AL FH M GVK + T+ SV AIAS L G H + +
Sbjct: 190 SGHAKTAHYEEALAFFHQMSKHGVKSSRSTLASVLSAIASLAALNHGLLVHAHAIKQGFE 249
Query: 452 LNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYS 511
+ +++++I+MY KC + A +VF I + V WNA++ + +G + ++++
Sbjct: 250 SSIYVASSLINMYGKCQMPDDARQVFDAISQKNMIV--WNAMLGVYSQNGFLSNVMELFL 307
Query: 512 DLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRA 571
D+ I + T+ +LSTC +++G R S +L ++D+ +A
Sbjct: 308 DMISCGIHPDEFTYTSILSTCACFEYLEVG-RQLHSAIIKKRFTSNLFVNNALIDMYAKA 366
Query: 572 GQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVG 609
G L++A + M + D + W ++ + VE G
Sbjct: 367 GALKEAGKHFEHMTYR-DHISWNAIIVG-YVQEEVEAG 402
>gi|359487569|ref|XP_002277031.2| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Vitis vinifera]
Length = 703
Score = 319 bits (818), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 200/610 (32%), Positives = 305/610 (50%), Gaps = 81/610 (13%)
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
C+++ +A N I+ Y R ++ AR VFD+ P K VS+ SM+ G+ QN+ REA +F
Sbjct: 12 CTSV-AIAYNSQIARYARIGQIESARRVFDEMPDKGIVSWNSMVAGYFQNNRPREARYLF 70
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
M P T++ W L++ Y
Sbjct: 71 DKM------PERNTVS------------W---------------------NGLISGYVKN 91
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYL 263
+ EAR FD M ERN+VSW M+ G+ + GLV A LF ++P K+VVSW M+ G +
Sbjct: 92 RMVSEARKAFDTMPERNVVSWTAMVRGYVQEGLVSEAETLFWQMPEKNVVSWTVMLGGLI 151
Query: 264 QVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDF 323
QV R+ EA ++ M + V ++IS + E ++ + + +
Sbjct: 152 QVRRIDEARGLFDIMPVKDV----VARTNMISGYCQEGRLAEARELFDEMPRRNVISW-- 205
Query: 324 IQATIIHFYAACGRINLARLQFELGIKDHIASW--------------------------- 356
T+I Y G++++AR FE+ + + SW
Sbjct: 206 --TTMISGYVQNGQVDVARKLFEVMPEKNEVSWTAMLMGYTQGGRIEEASELFDAMPVKA 263
Query: 357 ----NALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVD 412
NA+I GF +NG + ARQ+F+ ++++D +WSAMI Y + AL LF M
Sbjct: 264 VVACNAMILGFGQNGEVAKARQVFDQIREKDDGTWSAMIKVYERKGFEVEALNLFALMQR 323
Query: 413 AGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINT 472
GV+ N +++SV AS +L GR H ++ + + +++ +I MY KCG +
Sbjct: 324 EGVQSNFPSLISVLSVCASLASLDHGRQVHAELVKSQFDSDVFVASVLITMYVKCGDLVK 383
Query: 473 AFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTC 532
A ++F + + WN+II G A HG L+++ ++ + + +TF+GVLS C
Sbjct: 384 ARQIFDRFSPK--DIVMWNSIITGYAQHGLVEEALQVFHEMCSSGMATDGVTFVGVLSAC 441
Query: 533 CHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVI 592
+ G V G F+SMKS Y VEP +HY CMVDLLGRAG + DA ++I+ MP++AD +I
Sbjct: 442 SYTGKVKEGLEIFESMKSKYLVEPKTEHYACMVDLLGRAGLVNDAMDLIQKMPVEADAII 501
Query: 593 WGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRD 652
WG LL A R H N+ + E AAK L L+P + +LLSNIYA GRW D +R+ MR
Sbjct: 502 WGALLGACRTHMNMNLAEVAAKKLLQLEPKNAGPYILLSNIYASKGRWGDVAELRRNMRV 561
Query: 653 CGMKRLPGFS 662
+ + PG S
Sbjct: 562 KKVSKSPGCS 571
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 144/522 (27%), Positives = 245/522 (46%), Gaps = 75/522 (14%)
Query: 62 NSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCV 121
NS I YA+ G I A+ +FD V+ N M++GY +N+R +AR +FDK P + V
Sbjct: 20 NSQIARYARIGQIESARRVFDEMPDKGIVSWNSMVAGYFQNNRPREARYLFDKMPERNTV 79
Query: 122 SYTSMIMGFAQNDCWREALEVFRDMRIL---------------GVIPNEVTL------AS 160
S+ +I G+ +N EA + F M G++ TL +
Sbjct: 80 SWNGLISGYVKNRMVSEARKAFDTMPERNVVSWTAMVRGYVQEGLVSEAETLFWQMPEKN 139
Query: 161 VISSSVHLGGIWECRML---HGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMK 217
V+S +V LGG+ + R + GL +M V+ TN+++ YC L EAR LFDEM
Sbjct: 140 VVSWTVMLGGLIQVRRIDEARGL-FDIMPVKDVVARTNMISGYCQEGRLAEARELFDEMP 198
Query: 218 ERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRA 277
RN++SW M++G+ + G V++AR+LFE +P K+ VSW M+ GY Q R+ EA ++ A
Sbjct: 199 RRNVISWTTMISGYVQNGQVDVARKLFEVMPEKNEVSWTAMLMGYTQGGRIEEASELFDA 258
Query: 278 MLCDGIAPNDVMIVD---------------------------LISACGRAMAFGEGLQIH 310
M + + MI+ +I R E L +
Sbjct: 259 MPVKAVVACNAMILGFGQNGEVAKARQVFDQIREKDDGTWSAMIKVYERKGFEVEALNLF 318
Query: 311 SIIVKAGFDCYDFIQATIIHFYAACGRI-----------NLARLQFELGIKDHIASWNAL 359
+++ + G +F ++I + C + L + QF+ + +AS L
Sbjct: 319 ALMQREGVQS-NF--PSLISVLSVCASLASLDHGRQVHAELVKSQFDSDV--FVAS--VL 371
Query: 360 IAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNE 419
I +++ G + ARQ+F+ +D+ W+++I+GYAQ+ AL++FH M +G+ +
Sbjct: 372 ITMYVKCGDLVKARQIFDRFSPKDIVMWNSIITGYAQHGLVEEALQVFHEMCSSGMATDG 431
Query: 420 ITMVSVFCAIASSGTLKEGRWAHEYVLNNS-ITLNDNLSAAIIDMYAKCGSINTAFEVFY 478
+T V V A + +G +KEG E + + + A ++D+ + G +N A ++
Sbjct: 432 VTFVGVLSACSYTGKVKEGLEIFESMKSKYLVEPKTEHYACMVDLLGRAGLVNDAMDLIQ 491
Query: 479 HIRDRTTSVSPWNAIICGLAMHGDANL---TLKIYSDLEKRN 517
+ ++ W A++ H + NL K LE +N
Sbjct: 492 KMPVEADAII-WGALLGACRTHMNMNLAEVAAKKLLQLEPKN 532
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 129/272 (47%), Gaps = 32/272 (11%)
Query: 39 VSQGQ-QIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMIS 97
V GQ + +F+ E N +++ Y + G I +A +FD+ VACN MI
Sbjct: 213 VQNGQVDVARKLFEVMPEKNEVSWTAMLMGYTQGGRIEEASELFDAMPVKAVVACNAMIL 272
Query: 98 GYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVT 157
G+ +N + AR+VFD+ K ++++MI + + EAL +F M+ GV N +
Sbjct: 273 GFGQNGEVAKARQVFDQIREKDDGTWSAMIKVYERKGFEVEALNLFALMQREGVQSNFPS 332
Query: 158 LASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMK 217
L SV+S L + R +H ++K D V +++ L+ MY C LV+AR +FD
Sbjct: 333 LISVLSVCASLASLDHGRQVHAELVKSQFDSDVFVASVLITMYVKCGDLVKARQIFDRFS 392
Query: 218 ERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRA 277
++IV WN ++ G+A+ GLVE EAL ++
Sbjct: 393 PKDIVMWNSIITGYAQHGLVE-------------------------------EALQVFHE 421
Query: 278 MLCDGIAPNDVMIVDLISACGRAMAFGEGLQI 309
M G+A + V V ++SAC EGL+I
Sbjct: 422 MCSSGMATDGVTFVGVLSACSYTGKVKEGLEI 453
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 105/241 (43%), Gaps = 72/241 (29%)
Query: 25 ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSC 84
+L+S L C++ ++ G+Q+H+ + KS +S+ F+ + LI +Y KCG + +A+ +FD
Sbjct: 332 SLISVLSVCASLASLDHGRQVHAELVKSQFDSDVFVASVLITMYVKCGDLVKARQIFDRF 391
Query: 85 STLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFR 144
S D V N +I+GY AQ+ EAL+VF
Sbjct: 392 SPKDIVMWNSIITGY-------------------------------AQHGLVEEALQVFH 420
Query: 145 DMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCS 204
+M G+ + VT V+S+ + G + E GL I
Sbjct: 421 EMCSSGMATDGVTFVGVLSACSYTGKVKE-----GLEI---------------------- 453
Query: 205 SLVEARSLFDEMKERNIVS-----WNVMLNGFAKAGLVELARELFERIPSK-DVVSWGTM 258
F+ MK + +V + M++ +AGLV A +L +++P + D + WG +
Sbjct: 454 --------FESMKSKYLVEPKTEHYACMVDLLGRAGLVNDAMDLIQKMPVEADAIIWGAL 505
Query: 259 I 259
+
Sbjct: 506 L 506
>gi|147856413|emb|CAN82500.1| hypothetical protein VITISV_004914 [Vitis vinifera]
Length = 1408
Score = 319 bits (818), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 185/636 (29%), Positives = 324/636 (50%), Gaps = 52/636 (8%)
Query: 29 ALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLD 88
AL+ C+ + + G +IH + K G + + +++ +L+N Y +C
Sbjct: 680 ALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCW---------------- 723
Query: 89 PVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRI 148
L A +VF + P + + I+ Q++ ++ +E+FR M+
Sbjct: 724 ---------------GLEKANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQF 768
Query: 149 LGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVE 208
+ T+ V+ + +G + + +HG V + +D V + L++MY L
Sbjct: 769 SFLKAETATIVRVLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLEL 828
Query: 209 ARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPS----KDVVSWGTMIDGYLQ 264
AR +FD M+ RN SWN M++ +A G + A LF + S D+V+W ++ G+
Sbjct: 829 ARRVFDSMENRNTSSWNSMISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFL 888
Query: 265 VERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFI 324
E L + + M +G PN + ++ A G + H +++ GFDC ++
Sbjct: 889 HGYKEEVLNILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYV 948
Query: 325 QATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKR-- 382
++I Y + A+ F+ +I +WN+L++G+ GM EDA +L N M+K
Sbjct: 949 GTSLIDMYVKNHSLXSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGI 1008
Query: 383 --DVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRW 440
D+ +W+ MISGYA G PN ++ + A AS L++G+
Sbjct: 1009 KPDLVTWNGMISGYA-----------MWGCARKAFMPNSASITCLLRACASLSLLQKGKE 1057
Query: 441 AHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMH 500
H + N + ++ A+IDMY+K S+ A +VF I+++T ++ WN +I G A+
Sbjct: 1058 IHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQNKT--LASWNCMIMGFAIF 1115
Query: 501 GDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKH 560
G + ++++++K + ++ITF +LS C ++GL+ G +YF SM + Y + P L+H
Sbjct: 1116 GLGKEAISVFNEMQKVGVGPDAITFTALLSACKNSGLIGEGWKYFDSMITDYRIVPRLEH 1175
Query: 561 YGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQ 620
Y CMVDLLGRAG L++A ++I +MP+K D IWG LL + RIH N+ E AAK+L L+
Sbjct: 1176 YCCMVDLLGRAGYLDEAWDLIHTMPLKPDATIWGALLGSCRIHKNLXFAETAAKNLFKLE 1235
Query: 621 PSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMK 656
P++ + +L+ N+Y+ RWED +R+ M G++
Sbjct: 1236 PNNSANYILMMNLYSIFNRWEDMDHLRELMGAAGVR 1271
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 127/489 (25%), Positives = 221/489 (45%), Gaps = 56/489 (11%)
Query: 25 ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSC 84
+V L+ C A++ +QIH +F+ GL+S+ + N LI++Y+K G + A+ +FDS
Sbjct: 777 TIVRVLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSM 836
Query: 85 STLDPVACNIMISGYIRNDRLNDAREVF------DKTPIKCCVSYTSMIMGFAQNDCWRE 138
+ + N MIS Y LNDA +F D P V++ ++ G + E
Sbjct: 837 ENRNTSSWNSMISSYAALGFLNDAWSLFYELESSDMKP--DIVTWNCLLSGHFLHGYKEE 894
Query: 139 ALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLN 198
L + + M+ G PN ++ SV+ + LG + + HG V++ D V + T+L++
Sbjct: 895 VLNILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLID 954
Query: 199 MYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSK----DVVS 254
MY SL A+++FD MK RNI +WN +++G++ G+ E A L ++ + D+V+
Sbjct: 955 MYVKNHSLXSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVT 1014
Query: 255 WGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIV 314
W MI GY +A PN I L+ AC +G +IH + +
Sbjct: 1015 WNGMISGYAMWGCARKAFM-----------PNSASITCLLRACASLSLLQKGKEIHCLSI 1063
Query: 315 KAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQ 374
+ GF F+ +I Y+ + A F +ASWN +I GF G+ ++A
Sbjct: 1064 RNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFGLGKEAIS 1123
Query: 375 LFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGT 434
+FN MQK GV P+ IT ++ A +SG
Sbjct: 1124 VFNEMQK-------------------------------VGVGPDAITFTALLSACKNSGL 1152
Query: 435 LKEG-RWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAI 493
+ EG ++ + + I ++D+ + G ++ A+++ H + W A+
Sbjct: 1153 IGEGWKYFDSMITDYRIVPRLEHYCCMVDLLGRAGYLDEAWDLI-HTMPLKPDATIWGAL 1211
Query: 494 ICGLAMHGD 502
+ +H +
Sbjct: 1212 LGSCRIHKN 1220
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 105/395 (26%), Positives = 185/395 (46%), Gaps = 37/395 (9%)
Query: 140 LEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNM 199
LEVF+++ GV+ + + + + + IW +HG +IK D V + L+N
Sbjct: 659 LEVFKELHGKGVVFDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNF 718
Query: 200 YCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMI 259
Y C L +A +F EM P+ + + W I
Sbjct: 719 YGRCWGLEKANQVFHEM-------------------------------PNPEALLWNEAI 747
Query: 260 DGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFD 319
LQ E+L + + ++R M + IV ++ ACG+ A QIH + + G D
Sbjct: 748 ILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQACGKMGALNAAKQIHGYVFRFGLD 807
Query: 320 CYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNM 379
+ +I Y+ G++ LAR F+ + +SWN++I+ + G + DA LF +
Sbjct: 808 SDVSLCNPLISMYSKNGKLELARRVFDSMENRNTSSWNSMISSYAALGFLNDAWSLFYEL 867
Query: 380 Q----KRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTL 435
+ K D+ +W+ ++SG+ + L + M G KPN +M SV AI+ G L
Sbjct: 868 ESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQGEGFKPNSSSMTSVLQAISELGFL 927
Query: 436 KEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIIC 495
G+ H YVL N + + ++IDMY K S+ +A VF ++++R ++ WN+++
Sbjct: 928 NMGKETHGYVLRNGFDCDVYVGTSLIDMYVKNHSLXSAQAVFDNMKNR--NIFAWNSLVS 985
Query: 496 GLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLS 530
G + G L++ + +EK IK + +T+ G++S
Sbjct: 986 GYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMIS 1020
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 135/339 (39%), Gaps = 65/339 (19%)
Query: 193 STNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGF-AKAGLVELARELFERIPSKD 251
+ NL++ Y A +F RN + WN + F + AG + + E+F+ + K
Sbjct: 610 AKNLISSYLGFGDFWSAAMVFYVGLPRNYLKWNSFVEEFKSSAGSLHIVLEVFKELHGKG 669
Query: 252 VVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHS 311
VV E S AL C R M G++IH
Sbjct: 670 VV---------FDSEVYSVAL----------------------KTCTRVMDIWLGMEIHG 698
Query: 312 IIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIED 371
++K GFD +++ +++FY C W +E
Sbjct: 699 CLIKRGFDLDVYLRCALMNFYGRC--------------------WG-----------LEK 727
Query: 372 ARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIAS 431
A Q+F+ M + W+ I Q+E+ +ELF M + +K T+V V A
Sbjct: 728 ANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKMQFSFLKAETATIVRVLQACGK 787
Query: 432 SGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWN 491
G L + H YV + + +L +I MY+K G + A VF + +R T S WN
Sbjct: 788 MGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSKNGKLELARRVFDSMENRNT--SSWN 845
Query: 492 AIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLS 530
++I A G N ++ +LE ++K + +T+ +LS
Sbjct: 846 SMISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLS 884
>gi|15221566|ref|NP_177059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75333633|sp|Q9CAA8.1|PP108_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g68930
gi|12323213|gb|AAG51585.1|AC011665_6 hypothetical protein [Arabidopsis thaliana]
gi|332196743|gb|AEE34864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 743
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 185/623 (29%), Positives = 321/623 (51%), Gaps = 39/623 (6%)
Query: 43 QQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRN 102
+ IH I ++ TF+ N++++ YA + A+ +FD + + N ++ Y +
Sbjct: 26 KMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKA 85
Query: 103 DRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDM-RILGVIPNEVTLASV 161
+++ F+K P + V++ +I G++ + A++ + M R VTL ++
Sbjct: 86 GLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTM 145
Query: 162 ISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNI 221
+ S G + + +HG VIKL + ++++ + LL MY + +A+ +F + +RN
Sbjct: 146 LKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNT 205
Query: 222 VSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCD 281
V +N ++ G G++E A +LF R KD VSW MI G Q EA+ +R M
Sbjct: 206 VMYNSLMGGLLACGMIEDALQLF-RGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQ 264
Query: 282 GIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLA 341
G+ + ++ ACG A EG QIH+ I++ F
Sbjct: 265 GLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNF----------------------- 301
Query: 342 RLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPN 401
+DHI +ALI + + + A+ +F+ M++++V SW+AM+ GY Q +
Sbjct: 302 --------QDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAE 353
Query: 402 MALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAII 461
A+++F M +G+ P+ T+ A A+ +L+EG H + + + +S +++
Sbjct: 354 EAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLV 413
Query: 462 DMYAKCGSINTAFEVF--YHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIK 519
+Y KCG I+ + +F ++RD + W A++ A G A T++++ + + +K
Sbjct: 414 TLYGKCGDIDDSTRLFNEMNVRDAVS----WTAMVSAYAQFGRAVETIQLFDKMVQHGLK 469
Query: 520 LNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEE 579
+ +T GV+S C AGLV+ G+RYFK M S Y + P + HY CM+DL R+G+LE+A
Sbjct: 470 PDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMR 529
Query: 580 VIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGR 639
I MP D + W TLL+A R GN+E+G+ AA+SL L P H LLS+IYA G+
Sbjct: 530 FINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGK 589
Query: 640 WEDAFSIRKEMRDCGMKRLPGFS 662
W+ +R+ MR+ +K+ PG S
Sbjct: 590 WDSVAQLRRGMREKNVKKEPGQS 612
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 139/562 (24%), Positives = 253/562 (45%), Gaps = 91/562 (16%)
Query: 10 FNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYA 69
+N+ + + + L++ L+ S++ VS G+QIH + K G ES + + L+ +YA
Sbjct: 126 YNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYA 185
Query: 70 KCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMG 129
G IS AK +F + V N ++ G + + DA ++F K VS+ +MI G
Sbjct: 186 NVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGME-KDSVSWAAMIKG 244
Query: 130 FAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGF 189
AQN +EA+E FR+M++ G+ ++ SV+ + LG I E + +H +I+
Sbjct: 245 LAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDH 304
Query: 190 VIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPS 249
+ + + L++MYC C L A+++FD MK++N+VSW M+ G+ + G E A ++F
Sbjct: 305 IYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIF----- 359
Query: 250 KDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQI 309
L M R+ GI P+ + ISAC + EG Q
Sbjct: 360 ----------------------LDMQRS----GIDPDHYTLGQAISACANVSSLEEGSQF 393
Query: 310 HSIIVKAGFDCYDFIQATIIHFYAACGRI-NLARLQFELGIKDHIASWNALIAGFIRNGM 368
H + +G Y + +++ Y CG I + RL E+ ++D + SW A+++ + + G
Sbjct: 394 HGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAV-SWTAMVSAYAQFGR 452
Query: 369 IEDARQLFNNM-------------------------QKRDVY---------------SWS 388
+ QLF+ M +K Y +S
Sbjct: 453 AVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYS 512
Query: 389 AMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNN 448
MI ++++ + A+ +GM P+ I ++ A + G L+ G+WA E +
Sbjct: 513 CMIDLFSRSGRLEEAMRFINGMP---FPPDAIGWTTLLSACRNKGNLEIGKWAAESL--- 566
Query: 449 SITLNDNLSAA---IIDMYAKCGSINTAFEVFYHIRDRTTSVSP------WNAIICGLAM 499
I L+ + A + +YA G ++ ++ +R++ P W + +
Sbjct: 567 -IELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHSFSA 625
Query: 500 HGDANLTL-KIYSDLEKRNIKL 520
+++ L +IY+ LE+ N K+
Sbjct: 626 DDESSPYLDQIYAKLEELNNKI 647
>gi|359483655|ref|XP_003632994.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
Length = 613
Score = 319 bits (817), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 170/427 (39%), Positives = 247/427 (57%), Gaps = 37/427 (8%)
Query: 240 ARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGR 299
A ++F +I + ++ +W TMI GY + E AL +YR M I P+ L+ A +
Sbjct: 93 AHQIFSQIQNPNIFTWNTMIRGYAESENPMPALELYRQMHVSCIEPDTHTYPFLLKAIAK 152
Query: 300 AMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNAL 359
M EG ++HSI ++ GF+ F+Q T++H YAACG
Sbjct: 153 LMDVREGEKVHSIAIRNGFESLVFVQNTLVHMYAACGHA--------------------- 191
Query: 360 IAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNE 419
E A +LF M +R++ +W+++I+GYA N +PN AL LF M GV+P+
Sbjct: 192 ----------ESAHKLFELMAERNLVTWNSVINGYALNGRPNEALTLFREMGLRGVEPDG 241
Query: 420 ITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSA--AIIDMYAKCGSINTAFEVF 477
TMVS+ A A G L GR AH Y++ + L+ NL A A++D+YAKCGSI A +VF
Sbjct: 242 FTMVSLLSACAELGALALGRRAHVYMVK--VGLDGNLHAGNALLDLYAKCGSIRQAHKVF 299
Query: 478 YHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGL 537
+ ++ SV W ++I GLA++G L+++ +LE++ + + ITF+GVL C H G+
Sbjct: 300 DEMEEK--SVVSWTSLIVGLAVNGFGKEALELFKELERKGLMPSEITFVGVLYACSHCGM 357
Query: 538 VDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLL 597
VD G YFK MK Y + P ++HYGCMVDLLGRAG ++ A E I++MPM+ + V+W TLL
Sbjct: 358 VDEGFDYFKRMKEEYGIVPKIEHYGCMVDLLGRAGLVKQAHEFIQNMPMQPNAVVWRTLL 417
Query: 598 AASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKR 657
A IHG++ +GE A L L+P H VLLSN+YA RW D +R+ M G+K+
Sbjct: 418 GACTIHGHLALGEVARAQLLQLEPKHSGDYVLLSNLYASEQRWSDVHKVRRTMLREGVKK 477
Query: 658 LPGFSGV 664
PG S V
Sbjct: 478 TPGHSLV 484
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 98/403 (24%), Positives = 168/403 (41%), Gaps = 72/403 (17%)
Query: 108 AREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVH 167
A ++F + ++ +MI G+A+++ ALE++R M + + P+ T ++ +
Sbjct: 93 AHQIFSQIQNPNIFTWNTMIRGYAESENPMPALELYRQMHVSCIEPDTHTYPFLLKAIAK 152
Query: 168 LGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVM 227
L + E +H + I+ + V + L++MY C A LF+ M ERN+V+WN +
Sbjct: 153 LMDVREGEKVHSIAIRNGFESLVFVQNTLVHMYAACGHAESAHKLFELMAERNLVTWNSV 212
Query: 228 LNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPND 287
+NG+A G R +EALT++R M G+ P+
Sbjct: 213 INGYALNG-------------------------------RPNEALTLFREMGLRGVEPDG 241
Query: 288 VMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFEL 347
+V L+SAC A G + H +VK G D ++ YA CG I A F+
Sbjct: 242 FTMVSLLSACAELGALALGRRAHVYMVKVGLDGNLHAGNALLDLYAKCGSIRQAHKVFDE 301
Query: 348 GIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELF 407
+ + SW +LI G NG ++A +LF ++++
Sbjct: 302 MEEKSVVSWTSLIVGLAVNGFGKEALELFKELERK------------------------- 336
Query: 408 HGMVDAGVKPNEITMVSVFCAIASSGTLKEG-----RWAHEYVLNNSITLNDNLSAAIID 462
G+ P+EIT V V A + G + EG R EY I ++D
Sbjct: 337 ------GLMPSEITFVGVLYACSHCGMVDEGFDYFKRMKEEY----GIVPKIEHYGCMVD 386
Query: 463 MYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANL 505
+ + G + A E ++ + +V W ++ +HG L
Sbjct: 387 LLGRAGLVKQAHEFIQNMPMQPNAVV-WRTLLGACTIHGHLAL 428
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 150/341 (43%), Gaps = 92/341 (26%)
Query: 39 VSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISG 98
V +G+++HS+ ++G ES F+QN+L+++YA CG A +F+ +
Sbjct: 156 VREGEKVHSIAIRNGFESLVFVQNTLVHMYAACGHAESAHKLFELMAE------------ 203
Query: 99 YIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTL 158
RN V++ S+I G+A N EAL +FR+M + GV P+ T+
Sbjct: 204 --RN-----------------LVTWNSVINGYALNGRPNEALTLFREMGLRGVEPDGFTM 244
Query: 159 ASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKE 218
S++S+ LG + R H ++K+ +DG + LL++Y C S+ +A +FDEM+E
Sbjct: 245 VSLLSACAELGALALGRRAHVYMVKVGLDGNLHAGNALLDLYAKCGSIRQAHKVFDEMEE 304
Query: 219 RNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAM 278
+++VSW ++ G A G + A ELF+ + K
Sbjct: 305 KSVVSWTSLIVGLAVNGFGKEALELFKELERK---------------------------- 336
Query: 279 LCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRI 338
G+ P+++ V ++ AC H +V GFD +
Sbjct: 337 ---GLMPSEITFVGVLYACS-----------HCGMVDEGFDYFK---------------- 366
Query: 339 NLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNM 379
R++ E GI I + ++ R G+++ A + NM
Sbjct: 367 ---RMKEEYGIVPKIEHYGCMVDLLGRAGLVKQAHEFIQNM 404
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 110/259 (42%), Gaps = 77/259 (29%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+VS L C+ A++ G++ H + K GL+ N N+L++LYAKCG I QA
Sbjct: 242 FTMVSLLSACAELGALALGRRAHVYMVKVGLDGNLHAGNALLDLYAKCGSIRQA------ 295
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
+VFD+ K VS+TS+I+G A N +EALE+F
Sbjct: 296 -------------------------HKVFDEMEEKSVVSWTSLIVGLAVNGFGKEALELF 330
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
+++ G++P+E+T V+ + H G M+D
Sbjct: 331 KELERKGLMPSEITFVGVLYACSHCG---------------MVD---------------- 359
Query: 204 SSLVEARSLFDEMKER-----NIVSWNVMLNGFAKAGLVELARELFERIP-SKDVVSWGT 257
E F MKE I + M++ +AGLV+ A E + +P + V W T
Sbjct: 360 ----EGFDYFKRMKEEYGIVPKIEHYGCMVDLLGRAGLVKQAHEFIQNMPMQPNAVVWRT 415
Query: 258 M-----IDGYLQVERLSEA 271
+ I G+L + ++ A
Sbjct: 416 LLGACTIHGHLALGEVARA 434
>gi|225427280|ref|XP_002278897.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Vitis vinifera]
Length = 719
Score = 319 bits (817), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 183/491 (37%), Positives = 262/491 (53%), Gaps = 65/491 (13%)
Query: 237 VELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMY-RAMLCDGIAPNDVMIVDLIS 295
V+ A LFE + D T++ Y+ V AL Y M+ +APN L+
Sbjct: 108 VQHAVSLFEGLEEPDAFICNTIMRTYVNVNDPYTALGFYYEQMVRKCVAPNHYTFPLLVK 167
Query: 296 ACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIAS 355
C + G+G +IH+ I+K GF+ F++ ++IH Y+ CGRI AR FE+ + +
Sbjct: 168 VCWEIGSIGDGEKIHARILKFGFELDLFVRNSLIHMYSVCGRIGDARAMFEVCSISDLVT 227
Query: 356 WNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGY--------------------- 394
WN++I G+++NG I AR+LF M +RD++SW++MI+GY
Sbjct: 228 WNSMIDGYVKNGEIGAARELFEEMPERDLFSWNSMIAGYVGNGDMTAAEDLFNKMPFRDI 287
Query: 395 ----------AQNEQPNMALELFHGMVDAGV----------------------------- 415
AQ + +A ELF+ M V
Sbjct: 288 VSWNCMIDGYAQVQNMEIACELFNWMPYRNVVSWNIMLALYVRIKDYDECLRMFDKMMGE 347
Query: 416 -KPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNL-SAAIIDMYAKCGSINTA 473
PNE T+VSV A A G L G+W H Y+ NN + D L S A++ MYAKCG+++ A
Sbjct: 348 TMPNEATLVSVLTACAHLGRLDRGKWIHSYIKNNRVIEPDVLLSTALLTMYAKCGAMDLA 407
Query: 474 FEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCC 533
+VF + +R SV WN++I G MHG A+ L+++ D+EKR N TFI VLS C
Sbjct: 408 RDVFDKMSNR--SVVSWNSMIMGYGMHGQADKALEMFLDMEKRGPMPNDATFICVLSACA 465
Query: 534 HAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIW 593
H+G++ G YF M+ Y +EP ++HYGCMVDLLGRAG ++D EE+IR MPM+ +W
Sbjct: 466 HSGMILEGWWYFDLMRRAYKIEPKVEHYGCMVDLLGRAGLMKDLEELIRKMPMEGGTALW 525
Query: 594 GTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDC 653
G LL+A R H N E+ E AK L L+P +LLSNIYA G+W+D +RK M++
Sbjct: 526 GALLSACRTHSNSELAEIVAKRLIELEPRDIGPYLLLSNIYAAEGKWDDVEIVRKMMKER 585
Query: 654 GMKRLPGFSGV 664
G+ + GFS V
Sbjct: 586 GLTKTTGFSWV 596
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 128/584 (21%), Positives = 225/584 (38%), Gaps = 135/584 (23%)
Query: 4 DHFHSVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNS 63
DH H + L ++ L C + + QIH+ + SGL
Sbjct: 39 DHGHGLPEEDDQPLPILKLSHPILRTLESCCG--STKEFNQIHTQLIVSGLLQQPLAAGR 96
Query: 64 LIN-LYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVS 122
+ L + + A S+F+ D CN ++ Y+ +ND
Sbjct: 97 AVKTLCSFPDSVQHAVSLFEGLEEPDAFICNTIMRTYVN---VNDP-------------- 139
Query: 123 YTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVI 182
YT++ GF R+ V PN T ++ +G I + +H ++
Sbjct: 140 YTAL--GFYYEQMVRKC-----------VAPNHYTFPLLVKVCWEIGSIGDGEKIHARIL 186
Query: 183 KLMIDGFVIISTNLLNMYCVCSSLVEARS------------------------------- 211
K + + + +L++MY VC + +AR+
Sbjct: 187 KFGFELDLFVRNSLIHMYSVCGRIGDARAMFEVCSISDLVTWNSMIDGYVKNGEIGAARE 246
Query: 212 LFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLS-- 269
LF+EM ER++ SWN M+ G+ G + A +LF ++P +D+VSW MIDGY QV+ +
Sbjct: 247 LFEEMPERDLFSWNSMIAGYVGNGDMTAAEDLFNKMPFRDIVSWNCMIDGYAQVQNMEIA 306
Query: 270 -----------------------------EALTMYRAMLCDGIAPNDVMIVDLISACGRA 300
E L M+ M+ + + PN+ +V +++AC
Sbjct: 307 CELFNWMPYRNVVSWNIMLALYVRIKDYDECLRMFDKMMGETM-PNEATLVSVLTACAHL 365
Query: 301 MAFGEGLQIHSIIVKAGFDCYDFIQAT-IIHFYAACGRINLARLQFELGIKDHIASWNAL 359
G IHS I D + +T ++ YA CG ++LAR F+ + SWN++
Sbjct: 366 GRLDRGKWIHSYIKNNRVIEPDVLLSTALLTMYAKCGAMDLARDVFDKMSNRSVVSWNSM 425
Query: 360 IAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNE 419
I G+ +G + A ++F +M+KR G PN+
Sbjct: 426 IMGYGMHGQADKALEMFLDMEKR-------------------------------GPMPND 454
Query: 420 ITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLS--AAIIDMYAKCGSINTAFEVF 477
T + V A A SG + EG W + ++ + + + ++D+ + G + E+
Sbjct: 455 ATFICVLSACAHSGMILEGWWYFD-LMRRAYKIEPKVEHYGCMVDLLGRAGLMKDLEELI 513
Query: 478 YHIRDRTTSVSPWNAIICGLAMHGD---ANLTLKIYSDLEKRNI 518
+ + W A++ H + A + K +LE R+I
Sbjct: 514 RKM-PMEGGTALWGALLSACRTHSNSELAEIVAKRLIELEPRDI 556
>gi|359482115|ref|XP_003632713.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 989
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 200/641 (31%), Positives = 322/641 (50%), Gaps = 95/641 (14%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+ + S L C++ A +G+Q+HS + K G+ S+ I+ SL++LY KC FD
Sbjct: 315 VTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKC---------FD- 364
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
+ A E F T + V + M++ + Q E+ +F
Sbjct: 365 ---------------------IETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIF 403
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
M+I G++PN+ T S++ + LG + +H VIK GF N+Y VC
Sbjct: 404 LQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVIK---SGFQ------FNVY-VC 453
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYL 263
S V+++ +AK G ++ AR + +R+ +DVVSW MI GY
Sbjct: 454 S---------------------VLIDMYAKHGELDTARGILQRLREEDVVSWTAMIAGYT 492
Query: 264 QVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDF 323
Q + +EAL +++ M GI +++ ISAC A +G QIH+ +G+
Sbjct: 493 QHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQIHAQSYISGYS---- 548
Query: 324 IQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRD 383
+ ++ NAL++ + R G +DA F + +D
Sbjct: 549 ---------------------------EDLSIGNALVSLYARCGRAQDAYLAFEKIDAKD 581
Query: 384 VYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHE 443
SW+A+ISG+AQ+ AL++F M AGV+ N T S A A++ +K+G+ H
Sbjct: 582 NISWNALISGFAQSGHCEEALQVFSQMNQAGVEANLFTFGSAVSATANTANIKQGKQIHA 641
Query: 444 YVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDA 503
++ S +I +Y+KCGSI A F+ + ++ +V WNA+I G + HG
Sbjct: 642 MMIKTGYDSETEASNVLITLYSKCGSIEDAKREFFEMPEK--NVVSWNAMITGYSQHGYG 699
Query: 504 NLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGC 563
+ + ++ ++++ + N +TF+GVLS C H GLV+ G YF+SM + + P +HY C
Sbjct: 700 SEAVSLFEEMKQLGLMPNHVTFVGVLSACSHVGLVNEGLSYFRSMSKEHGLVPKPEHYVC 759
Query: 564 MVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSH 623
+VDLLGRA L A E I MP++ D +IW TLL+A +H N+E+GE AA+ L L+P
Sbjct: 760 VVDLLGRAALLCCAREFIEEMPIEPDAMIWRTLLSACTVHKNIEIGEFAARHLLELEPED 819
Query: 624 GPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
+ VLLSN+YA +G+W+ R+ M+D G+K+ PG S +
Sbjct: 820 SATYVLLSNMYAVSGKWDYRDRTRQMMKDRGVKKEPGRSWI 860
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 155/678 (22%), Positives = 274/678 (40%), Gaps = 147/678 (21%)
Query: 23 ELALVSALRYCSAHIAVSQ-GQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMF 81
E S LR CS A Q +QIH+ I G S+ + N LI+LY+K G + AK +F
Sbjct: 111 ESTFASVLRACSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVF 170
Query: 82 DSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALE 141
+ D V+ MISG +N R + EA+
Sbjct: 171 ERLFLKDSVSWVAMISGLSQNGRED-------------------------------EAIL 199
Query: 142 VFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYC 201
+F M VIP +SV+S+ + LHG ++K + + L+ +Y
Sbjct: 200 LFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSETFVCNALVTLYS 259
Query: 202 VCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIP------------- 248
+L+ A +F +M R+ +S+N +++G A+ G + A +LFE++
Sbjct: 260 RWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKMQLDCMKPDCVTVAS 319
Query: 249 --------------------------SKDVVSWGTMIDGYL------------------- 263
S D++ G+++D Y+
Sbjct: 320 LLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETEN 379
Query: 264 ------------QVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHS 311
Q+ LSE+ ++ M +G+ PN ++ C A G QIH+
Sbjct: 380 VVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHT 439
Query: 312 IIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIED 371
++K+GF ++ + +I YA G ++ AR + ++ + SW A+IAG+ ++ + +
Sbjct: 440 QVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLREEDVVSWTAMIAGYTQHDLFAE 499
Query: 372 ARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIAS 431
A +LF M+ + G++ + I S A A
Sbjct: 500 ALKLFQEMENQ-------------------------------GIRSDNIGFSSAISACAG 528
Query: 432 SGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWN 491
L +G+ H + + + ++ A++ +YA+CG A+ F I D ++S WN
Sbjct: 529 IQALNQGQQIHAQSYISGYSEDLSIGNALVSLYARCGRAQDAYLAFEKI-DAKDNIS-WN 586
Query: 492 AIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSM-KS 550
A+I G A G L+++S + + ++ N TF +S + + G++ M K+
Sbjct: 587 ALISGFAQSGHCEEALQVFSQMNQAGVEANLFTFGSAVSATANTANIKQGKQIHAMMIKT 646
Query: 551 VYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGE 610
Y+ E + + ++ L + G +EDA+ MP K +VV W ++ HG G
Sbjct: 647 GYDSETEASN--VLITLYSKCGSIEDAKREFFEMPEK-NVVSWNAMITGYSQHG---YGS 700
Query: 611 RAAKSLA-----GLQPSH 623
A GL P+H
Sbjct: 701 EAVSLFEEMKQLGLMPNH 718
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 146/565 (25%), Positives = 255/565 (45%), Gaps = 102/565 (18%)
Query: 42 GQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIR 101
+++H+ IFKSG + + + LI++Y G + A +FD + + N +ISG +
Sbjct: 29 AKKLHARIFKSGFDGEDVLGSRLIDIYLAHGEVDNAIKLFDDIPSSNVSFWNKVISGLL- 87
Query: 102 NDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASV 161
A+++ S ++G +F M V P+E T ASV
Sbjct: 88 ------AKKL------------ASQVLG------------LFSLMITENVTPDESTFASV 117
Query: 162 ISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNI 221
+ + GG ++ + K++ GF S+ L VC+ L++
Sbjct: 118 LRACS--GGKAPFQVTEQIHAKIIHHGFG--SSPL-----VCNPLIDL------------ 156
Query: 222 VSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCD 281
++K G V+LA+ +FER+ KD VSW MI G Q R EA+ ++ M
Sbjct: 157 ---------YSKNGHVDLAKLVFERLFLKDSVSWVAMISGLSQNGREDEAILLFCQMHKS 207
Query: 282 GIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLA 341
+ P + ++SAC + F G Q+H IVK G F+ ++ Y
Sbjct: 208 AVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSETFVCNALVTLY--------- 258
Query: 342 RLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPN 401
+ W LIA A Q+F+ M +RD S++++ISG AQ +
Sbjct: 259 ------------SRWGNLIA----------AEQIFSKMHRRDRISYNSLISGLAQRGFSD 296
Query: 402 MALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAII 461
AL+LF M +KP+ +T+ S+ A AS G +G+ H YV+ ++ + + +++
Sbjct: 297 RALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLL 356
Query: 462 DMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLN 521
D+Y KC I TA E Y + T +V WN ++ G+ + + I+ ++ + N
Sbjct: 357 DLYVKCFDIETAHE--YFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPN 414
Query: 522 SITFIGVLSTCCHAGLVDLGER-YFKSMKSVYNVEPDLKHYGC--MVDLLGRAGQLEDAE 578
T+ +L TC G +DLGE+ + + +KS + Y C ++D+ + G+L+ A
Sbjct: 415 QYTYPSILRTCTSLGALDLGEQIHTQVIKSGFQ----FNVYVCSVLIDMYAKHGELDTAR 470
Query: 579 EVIRSMPMKADVVIWGTLLAASRIH 603
+++ + + DVV W ++A H
Sbjct: 471 GILQRL-REEDVVSWTAMIAGYTQH 494
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 109/465 (23%), Positives = 197/465 (42%), Gaps = 73/465 (15%)
Query: 146 MRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSS 205
M G+ N T + + G + + + LH + K DG ++ + L+++Y
Sbjct: 1 MEERGIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLA--- 57
Query: 206 LVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQV 265
G V+ A +LF+ IPS +V W +I G L
Sbjct: 58 ----------------------------HGEVDNAIKLFDDIPSSNVSFWNKVISGLLAK 89
Query: 266 ERLSEALTMYRAMLCDGIAPNDVMIVDLISAC-GRAMAFGEGLQIHSIIVKAGFDCYDFI 324
+ S+ L ++ M+ + + P++ ++ AC G F QIH+ I+ GF +
Sbjct: 90 KLASQVLGLFSLMITENVTPDESTFASVLRACSGGKAPFQVTEQIHAKIIHHGFGSSPLV 149
Query: 325 QATIIHFYAACGRINLARLQFE-LGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRD 383
+I Y+ G ++LA+L FE L +KD + SW A+I+G +NG ++A LF M K
Sbjct: 150 CNPLIDLYSKNGHVDLAKLVFERLFLKDSV-SWVAMISGLSQNGREDEAILLFCQMHK-- 206
Query: 384 VYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHE 443
+ V P SV A K G H
Sbjct: 207 -----------------------------SAVIPTPYVFSSVLSACTKIELFKLGEQLHG 237
Query: 444 YVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVF--YHIRDRTTSVSPWNAIICGLAMHG 501
+++ ++ + A++ +Y++ G++ A ++F H RDR + +N++I GLA G
Sbjct: 238 FIVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRIS----YNSLISGLAQRG 293
Query: 502 DANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHY 561
++ L+++ ++ +K + +T +LS C G G++ S + DL
Sbjct: 294 FSDRALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQ-LHSYVIKMGMSSDLIIE 352
Query: 562 GCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNV 606
G ++DL + +E A E + + +VV+W +L A GN+
Sbjct: 353 GSLLDLYVKCFDIETAHEYFLTTETE-NVVLWNVMLVAYGQLGNL 396
>gi|356506811|ref|XP_003522169.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 751
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 192/626 (30%), Positives = 309/626 (49%), Gaps = 94/626 (15%)
Query: 39 VSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISG 98
+++G+Q+H+++ + G NTF+ N +NLY+KCG
Sbjct: 91 LNKGKQLHAMLIRGGCLPNTFLSNHFLNLYSKCG-------------------------- 124
Query: 99 YIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTL 158
L+ ++FDK + VS+TS+I GFA N ++EAL F MRI G I + L
Sbjct: 125 -----ELDYTIKLFDKMSQRNMVSWTSIITGFAHNSRFQEALSSFCQMRIEGEIATQFAL 179
Query: 159 ASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKE 218
+SV+ + LG I +H LV+K + + +NL +MY C L +A F+EM
Sbjct: 180 SSVLQACTSLGAIQFGTQVHCLVVKCGFGCELFVGSNLTDMYSKCGELSDACKAFEEM-- 237
Query: 219 RNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAM 278
P KD V W +MIDG+++ +ALT Y M
Sbjct: 238 -----------------------------PCKDAVLWTSMIDGFVKNGDFKKALTAYMKM 268
Query: 279 LCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRI 338
+ D + + ++ +SAC A G +H+ I+K GF+ FI + Y+ G +
Sbjct: 269 VTDDVFIDQHVLCSTLSACSALKASSFGKSLHATILKLGFEYETFIGNALTDMYSKSGDM 328
Query: 339 NLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNE 398
A F++ D I+ + S +A+I GY + +
Sbjct: 329 VSASNVFQIH-SDCIS-----------------------------IVSLTAIIDGYVEMD 358
Query: 399 QPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSA 458
Q AL F + G++PNE T S+ A A+ L+ G H V+ + + +S+
Sbjct: 359 QIEKALSTFVDLRRRGIEPNEFTFTSLIKACANQAKLEHGSQLHGQVVKFNFKRDPFVSS 418
Query: 459 AIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNI 518
++DMY KCG + + ++F I + WN ++ + HG ++ ++ + R +
Sbjct: 419 TLVDMYGKCGLFDHSIQLFDEIENPDEIA--WNTLVGVFSQHGLGRNAIETFNGMIHRGL 476
Query: 519 KLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAE 578
K N++TF+ +L C HAG+V+ G YF SM+ +Y V P +HY C++DLLGRAG+L++AE
Sbjct: 477 KPNAVTFVNLLKGCSHAGMVEDGLNYFSSMEKIYGVVPKEEHYSCVIDLLGRAGKLKEAE 536
Query: 579 EVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAG 638
+ I +MP + +V W + L A +IHG++E + AA L L+P + + VLLSNIYA
Sbjct: 537 DFINNMPFEPNVFGWCSFLGACKIHGDMERAKFAADKLMKLEPENSGAHVLLSNIYAKEK 596
Query: 639 RWEDAFSIRKEMRDCGMKRLPGFSGV 664
+WED S+RK ++D M +LPG+S V
Sbjct: 597 QWEDVQSLRKMIKDGNMNKLPGYSWV 622
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 113/484 (23%), Positives = 201/484 (41%), Gaps = 100/484 (20%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
+ AL S L+ C++ A+ G Q+H L+ K G F+ ++L ++Y+KCG +S D
Sbjct: 176 QFALSSVLQACTSLGAIQFGTQVHCLVVKCGFGCELFVGSNLTDMYSKCGELS------D 229
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+C + + C K V +TSMI GF +N +++AL
Sbjct: 230 ACKAFEEMPC-------------------------KDAVLWTSMIDGFVKNGDFKKALTA 264
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
+ M V ++ L S +S+ L + LH ++KL + I L +MY
Sbjct: 265 YMKMVTDDVFIDQHVLCSTLSACSALKASSFGKSLHATILKLGFEYETFIGNALTDMYSK 324
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSK--DVVSWGTMID 260
+V A ++F +I S +VS +ID
Sbjct: 325 SGDMVSASNVF--------------------------------QIHSDCISIVSLTAIID 352
Query: 261 GYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDC 320
GY++++++ +AL+ + + GI PN+ LI AC G Q+H +VK F
Sbjct: 353 GYVEMDQIEKALSTFVDLRRRGIEPNEFTFTSLIKACANQAKLEHGSQLHGQVVKFNFKR 412
Query: 321 YDFIQATIIHFYAACGRINLARLQF-ELGIKDHIASWNALIAGFIRNGMIEDARQLFNNM 379
F+ +T++ Y CG + + F E+ D IA WN L+ F ++G+ +
Sbjct: 413 DPFVSSTLVDMYGKCGLFDHSIQLFDEIENPDEIA-WNTLVGVFSQHGLGRN-------- 463
Query: 380 QKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG- 438
A+E F+GM+ G+KPN +T V++ + +G +++G
Sbjct: 464 -----------------------AIETFNGMIHRGLKPNAVTFVNLLKGCSHAGMVEDGL 500
Query: 439 RWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLA 498
+ + + + +ID+ + G + A E F + +V W + +
Sbjct: 501 NYFSSMEKIYGVVPKEEHYSCVIDLLGRAGKLKEA-EDFINNMPFEPNVFGWCSFLGACK 559
Query: 499 MHGD 502
+HGD
Sbjct: 560 IHGD 563
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 91/436 (20%), Positives = 161/436 (36%), Gaps = 80/436 (18%)
Query: 290 IVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGI 349
+ LI R +G Q+H+++++ G F+ ++ Y+ CG ++ F+
Sbjct: 78 VAHLIQTYARTKELNKGKQLHAMLIRGGCLPNTFLSNHFLNLYSKCGELDYTIKLFDKMS 137
Query: 350 KDHIASWNALIAGFIRNGMIEDARQLFNNMQKR--------------------------- 382
+ ++ SW ++I GF N ++A F M+
Sbjct: 138 QRNMVSWTSIITGFAHNSRFQEALSSFCQMRIEGEIATQFALSSVLQACTSLGAIQFGTQ 197
Query: 383 ---------------------DVYSWSAMISG--YAQNEQPNMALELFHGMVDAGVKPNE 419
D+YS +S A E P L+ M+D VK +
Sbjct: 198 VHCLVVKCGFGCELFVGSNLTDMYSKCGELSDACKAFEEMPCKDAVLWTSMIDGFVKNGD 257
Query: 420 --------ITMVS--------VFCAIASS-GTLKE---GRWAHEYVLNNSITLNDNLSAA 459
+ MV+ V C+ S+ LK G+ H +L + A
Sbjct: 258 FKKALTAYMKMVTDDVFIDQHVLCSTLSACSALKASSFGKSLHATILKLGFEYETFIGNA 317
Query: 460 IIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIK 519
+ DMY+K G + +A VF I S+ AII G L + DL +R I+
Sbjct: 318 LTDMYSKSGDMVSASNVF-QIHSDCISIVSLTAIIDGYVEMDQIEKALSTFVDLRRRGIE 376
Query: 520 LNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEE 579
N TF ++ C + ++ G + + +N + D +VD+ G+ G + + +
Sbjct: 377 PNEFTFTSLIKACANQAKLEHGSQLHGQVVK-FNFKRDPFVSSTLVDMYGKCGLFDHSIQ 435
Query: 580 VIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGL-QPSHGPSRVLLSNIY---A 635
+ + D + W TL+ HG +G A ++ G+ P+ V N+ +
Sbjct: 436 LFDEIE-NPDEIAWNTLVGVFSQHG---LGRNAIETFNGMIHRGLKPNAVTFVNLLKGCS 491
Query: 636 DAGRWEDAFSIRKEMR 651
AG ED + M
Sbjct: 492 HAGMVEDGLNYFSSME 507
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 75/178 (42%), Gaps = 6/178 (3%)
Query: 421 TMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHI 480
T+ + A + L +G+ H ++ N LS +++Y+KCG ++ ++F +
Sbjct: 77 TVAHLIQTYARTKELNKGKQLHAMLIRGGCLPNTFLSNHFLNLYSKCGELDYTIKLFDKM 136
Query: 481 RDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDL 540
R ++ W +II G A + L + + VL C G +
Sbjct: 137 SQR--NMVSWTSIITGFAHNSRFQEALSSFCQMRIEGEIATQFALSSVLQACTSLGAIQF 194
Query: 541 GER-YFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLL 597
G + + +K + E L + D+ + G+L DA + MP K D V+W +++
Sbjct: 195 GTQVHCLVVKCGFGCE--LFVGSNLTDMYSKCGELSDACKAFEEMPCK-DAVLWTSMI 249
>gi|297740109|emb|CBI30291.3| unnamed protein product [Vitis vinifera]
Length = 616
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 183/550 (33%), Positives = 282/550 (51%), Gaps = 65/550 (11%)
Query: 116 PIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECR 175
P + VS+T+MI G +QN + EA+ F MRI G +P + +S I + LG I +
Sbjct: 2 PQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGK 61
Query: 176 MLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAG 235
+H L +K I + + +NL +MY C ++ +A +F+EM
Sbjct: 62 QMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEM------------------- 102
Query: 236 LVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLIS 295
P KD VSW MIDGY ++ EAL ++ M+ + + + ++ +
Sbjct: 103 ------------PCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLG 150
Query: 296 ACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIAS 355
ACG A G +HS +VK GF+ F+
Sbjct: 151 ACGALKACKFGRSVHSSVVKLGFESDIFVG------------------------------ 180
Query: 356 WNALIAGFIRNGMIEDARQLFN-NMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAG 414
NAL + + G +E A +F + + R+V S++ +I GY + EQ L +F + G
Sbjct: 181 -NALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQG 239
Query: 415 VKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAF 474
++PNE T S+ A A+ L++G H V+ + + +S+ ++DMY KCG + A
Sbjct: 240 IEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAI 299
Query: 475 EVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCH 534
+ F I D T WN+++ HG +KI+ + R +K N+ITFI +L+ C H
Sbjct: 300 QAFDEIGDPTEIA--WNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSH 357
Query: 535 AGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWG 594
AGLV+ G YF SM Y V P +HY C++DLLGRAG+L++A+E I MP + + W
Sbjct: 358 AGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWC 417
Query: 595 TLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCG 654
+ L A RIHG+ E+G+ AA+ L L+P + + VLLSNIYA+ +WED S+R MRD
Sbjct: 418 SFLGACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMRDGN 477
Query: 655 MKRLPGFSGV 664
+K+LPG+S V
Sbjct: 478 VKKLPGYSWV 487
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 121/487 (24%), Positives = 219/487 (44%), Gaps = 100/487 (20%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
+ A SA+R C++ ++ G+Q+H L K G+ S F+ ++L ++Y+KCG +MFD
Sbjct: 41 QFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCG------AMFD 94
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+C +VF++ P K VS+T+MI G+++ + EAL
Sbjct: 95 AC-------------------------KVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLA 129
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
F+ M V ++ L S + + L R +H V+KL + + + L +MY
Sbjct: 130 FKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMY-- 187
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFE-RIPSKDVVSWGTMIDG 261
+KAG +E A +F ++VVS+ +IDG
Sbjct: 188 -----------------------------SKAGDMESASNVFGIDSECRNVVSYTCLIDG 218
Query: 262 YLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCY 321
Y++ E++ + L+++ + GI PN+ LI AC A +G Q+H+ ++K FD
Sbjct: 219 YVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDED 278
Query: 322 DFIQATIIHFYAACGRINLARLQF-ELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ 380
F+ + ++ Y CG + A F E+G IA WN+L++ F ++G+ +D
Sbjct: 279 PFVSSILVDMYGKCGLLEQAIQAFDEIGDPTEIA-WNSLVSVFGQHGLGKD--------- 328
Query: 381 KRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRW 440
A+++F MVD GVKPN IT +S+ + +G ++EG
Sbjct: 329 ----------------------AIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEG-L 365
Query: 441 AHEYVLNNS--ITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLA 498
+ Y ++ + + + + +ID+ + G + A E + + W + +
Sbjct: 366 DYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFG-WCSFLGACR 424
Query: 499 MHGDANL 505
+HGD +
Sbjct: 425 IHGDKEM 431
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/360 (23%), Positives = 152/360 (42%), Gaps = 38/360 (10%)
Query: 247 IPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEG 306
+P +++VSW MI G Q + SEA+ + M G P I AC + G
Sbjct: 1 MPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMG 60
Query: 307 LQIHSIIVKAGFDCYDFIQATIIHFYAACGRI-NLARLQFELGIKDHIASWNALIAGFIR 365
Q+H + +K G F+ + + Y+ CG + + ++ E+ KD + SW A+I G+ +
Sbjct: 61 KQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEV-SWTAMIDGYSK 119
Query: 366 NGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSV 425
G E+ AL F M+D V ++ + S
Sbjct: 120 IGEFEE-------------------------------ALLAFKKMIDEEVTIDQHVLCST 148
Query: 426 FCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTT 485
A + K GR H V+ + + A+ DMY+K G + +A VF I
Sbjct: 149 LGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVF-GIDSECR 207
Query: 486 SVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGER-Y 544
+V + +I G L ++ +L ++ I+ N TF ++ C + ++ G + +
Sbjct: 208 NVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLH 267
Query: 545 FKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHG 604
+ MK ++ +P + +VD+ G+ G LE A + + ++ W +L++ HG
Sbjct: 268 AQVMKINFDEDPFVSSI--LVDMYGKCGLLEQAIQAFDEIGDPTEIA-WNSLVSVFGQHG 324
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 95/232 (40%), Gaps = 16/232 (6%)
Query: 39 VSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTL----DPVACNI 94
+ +G + + + G+E N F +SLI A + Q + + DP +I
Sbjct: 225 IEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSI 284
Query: 95 MISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPN 154
++ Y + L A + FD+ +++ S++ F Q+ ++A+++F M GV PN
Sbjct: 285 LVDMYGKCGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPN 344
Query: 155 EVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV------CSSLVE 208
+T S+++ H G + E GL +D + + CV L E
Sbjct: 345 AITFISLLTGCSHAGLVEE-----GLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKE 399
Query: 209 ARSLFDEMK-ERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMI 259
A+ + M E N W L G E+ + E++ + + G ++
Sbjct: 400 AKEFINRMPFEPNAFGWCSFLGACRIHGDKEMGKLAAEKLVKLEPKNSGALV 451
>gi|255570475|ref|XP_002526196.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534500|gb|EEF36200.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 491
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 161/423 (38%), Positives = 248/423 (58%), Gaps = 2/423 (0%)
Query: 240 ARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGR 299
A LF + + W T+I + + +A+ +++ ML PN+ L AC
Sbjct: 64 AYRLFLGLRHRSTFIWNTVIRAFAEKNEPRKAIMLFKNMLYSNFLPNNYTYSFLFKACTD 123
Query: 300 AMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNAL 359
GL H +K G++ YDF+Q ++H +A G ++ AR F+L + +W AL
Sbjct: 124 LNNLYLGLACHCQSIKLGWEFYDFVQNGLVHMFAIFGCMDSARKLFDLSSNRDVITWTAL 183
Query: 360 IAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNE 419
I G++R G + R+LF+ M +R+ SWSAMI+GY + ALELF+ M+ +G PN
Sbjct: 184 INGYVRAGQVLIGRELFDKMPERNSVSWSAMITGYVRVGFFEEALELFNAMLISGFWPNH 243
Query: 420 ITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYH 479
+V A AS G L +GRW H Y+ N + L+ + AA+IDMYAKCG I A +F
Sbjct: 244 AGIVCAINACASLGALDQGRWIHCYIKRNRMDLDRVMGAALIDMYAKCGCIEIACSIFGE 303
Query: 480 IRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVD 539
+R+R V + +I GLA HG + ++++ + + N +TF+ VL+ C GLVD
Sbjct: 304 LRNRDVHV--YTCLISGLANHGQSATAVELFERMHSEGVVPNEVTFVSVLNACSRMGLVD 361
Query: 540 LGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAA 599
G R F++M +Y EP ++HYGC+VDLLGRAG+LE+A+++++ MPMK D + G LL A
Sbjct: 362 KGLRIFENMSKIYGDEPQVQHYGCLVDLLGRAGKLEEAKKLVKEMPMKPDSYVLGALLNA 421
Query: 600 SRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLP 659
SR++G+VE+GE +SLA L H V+LSN+YA A +W++ +R+ M D ++++P
Sbjct: 422 SRVYGDVELGEETVESLAQLSLDHSGVHVVLSNMYASANKWDEVARVRRGMGDKKVRKVP 481
Query: 660 GFS 662
G S
Sbjct: 482 GCS 484
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 116/392 (29%), Positives = 188/392 (47%), Gaps = 40/392 (10%)
Query: 56 SNTFIQNSLINLYA--KCGLISQAKSMFD----SCSTLDPVACNIMISGYIRNDR---LN 106
S+T+++ S L+ KC ISQ K + S + DP A +IS + L+
Sbjct: 3 SSTYVKASKKTLFLLDKCRTISQIKQIQTHLTVSGTLKDPYAAAKIISFCALSSNQFSLS 62
Query: 107 DAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSV 166
A +F + + ++I FA+ + R+A+ +F++M +PN T + + +
Sbjct: 63 HAYRLFLGLRHRSTFIWNTVIRAFAEKNEPRKAIMLFKNMLYSNFLPNNYTYSFLFKACT 122
Query: 167 HLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNV 226
L ++ H IKL + + + L++M+ + + AR LFD R++++W
Sbjct: 123 DLNNLYLGLACHCQSIKLGWEFYDFVQNGLVHMFAIFGCMDSARKLFDLSSNRDVITWTA 182
Query: 227 MLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPN 286
++NG+ +AG V + RELF+++P ++ VSW MI GY++V EAL ++ AML G PN
Sbjct: 183 LINGYVRAGQVLIGRELFDKMPERNSVSWSAMITGYVRVGFFEEALELFNAMLISGFWPN 242
Query: 287 DVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFE 346
IV I+AC A +G IH I + D + A +I YA C
Sbjct: 243 HAGIVCAINACASLGALDQGRWIHCYIKRNRMDLDRVMGAALIDMYAKC----------- 291
Query: 347 LGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALEL 406
G IE A +F ++ RDV+ ++ +ISG A + Q A+EL
Sbjct: 292 --------------------GCIEIACSIFGELRNRDVHVYTCLISGLANHGQSATAVEL 331
Query: 407 FHGMVDAGVKPNEITMVSVFCAIASSGTLKEG 438
F M GV PNE+T VSV A + G + +G
Sbjct: 332 FERMHSEGVVPNEVTFVSVLNACSRMGLVDKG 363
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 90/353 (25%), Positives = 160/353 (45%), Gaps = 62/353 (17%)
Query: 42 GQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIR 101
G H K G E F+QN L++++A G + A+ +FD S D + +I+GY+R
Sbjct: 130 GLACHCQSIKLGWEFYDFVQNGLVHMFAIFGCMDSARKLFDLSSNRDVITWTALINGYVR 189
Query: 102 NDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASV 161
++ RE+FDK P + VS+++MI G+ + + EALE+F M I G PN +
Sbjct: 190 AGQVLIGRELFDKMPERNSVSWSAMITGYVRVGFFEEALELFNAMLISGFWPNHAGIVCA 249
Query: 162 ISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNI 221
I++ LG + + R +H + + +D ++ L++MY C + A S+F E++ R++
Sbjct: 250 INACASLGALDQGRWIHCYIKRNRMDLDRVMGAALIDMYAKCGCIEIACSIFGELRNRDV 309
Query: 222 VSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCD 281
+ +++G A G A ELFER+ S +
Sbjct: 310 HVYTCLISGLANHGQSATAVELFERMHS-------------------------------E 338
Query: 282 GIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLA 341
G+ PN+V V +++AC R +GL+I N++
Sbjct: 339 GVVPNEVTFVSVLNACSRMGLVDKGLRIFE---------------------------NMS 371
Query: 342 RLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNM-QKRDVYSWSAMISG 393
++ G + + + L+ R G +E+A++L M K D Y A+++
Sbjct: 372 KI---YGDEPQVQHYGCLVDLLGRAGKLEEAKKLVKEMPMKPDSYVLGALLNA 421
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 100/226 (44%), Gaps = 61/226 (26%)
Query: 25 ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSC 84
+V A+ C++ A+ QG+ IH I ++ ++ + + +LI++YAKCG I
Sbjct: 245 GIVCAINACASLGALDQGRWIHCYIKRNRMDLDRVMGAALIDMYAKCGCIE--------- 295
Query: 85 STLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFR 144
+AC+I G +RN R+V YT +I G A + A+E+F
Sbjct: 296 -----IACSIF--GELRN------RDVH---------VYTCLISGLANHGQSATAVELFE 333
Query: 145 DMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCS 204
M GV+PNEVT SV+++ +G ++D + I N+ +Y
Sbjct: 334 RMHSEGVVPNEVTFVSVLNACSRMG---------------LVDKGLRIFENMSKIYG--- 375
Query: 205 SLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSK 250
E + + +++ +AG +E A++L + +P K
Sbjct: 376 ------------DEPQVQHYGCLVDLLGRAGKLEEAKKLVKEMPMK 409
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/244 (20%), Positives = 101/244 (41%), Gaps = 10/244 (4%)
Query: 369 IEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCA 428
+ A +LF ++ R + W+ +I +A+ +P A+ LF M+ + PN T +F A
Sbjct: 61 LSHAYRLFLGLRHRSTFIWNTVIRAFAEKNEPRKAIMLFKNMLYSNFLPNNYTYSFLFKA 120
Query: 429 IASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVS 488
L G H + D + ++ M+A G +++A ++F +R V
Sbjct: 121 CTDLNNLYLGLACHCQSIKLGWEFYDFVQNGLVHMFAIFGCMDSARKLFDLSSNR--DVI 178
Query: 489 PWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSM 548
W A+I G G + +++ + +R NS+++ +++ G + F +M
Sbjct: 179 TWTALINGYVRAGQVLIGRELFDKMPER----NSVSWSAMITGYVRVGFFEEALELFNAM 234
Query: 549 KSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEV---IRSMPMKADVVIWGTLLAASRIHGN 605
+ P+ C ++ G L+ + I+ M D V+ L+ G
Sbjct: 235 L-ISGFWPNHAGIVCAINACASLGALDQGRWIHCYIKRNRMDLDRVMGAALIDMYAKCGC 293
Query: 606 VEVG 609
+E+
Sbjct: 294 IEIA 297
>gi|225423551|ref|XP_002274884.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
mitochondrial [Vitis vinifera]
gi|147818711|emb|CAN65040.1| hypothetical protein VITISV_009460 [Vitis vinifera]
Length = 700
Score = 318 bits (816), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 200/636 (31%), Positives = 311/636 (48%), Gaps = 98/636 (15%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
L+ CS +G+++H I K G ++F+ L+++YAKC
Sbjct: 145 LKACSELRETDEGRKLHCQIVKVG-SPDSFVLTGLVDMYAKC------------------ 185
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
+ D+R VFD+ + V +TSMI+G+ QNDC +E L +F MR
Sbjct: 186 -------------REVEDSRRVFDEILDRNVVCWTSMIVGYVQNDCLKEGLVLFNRMREG 232
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
V N+ TL S++++ LG + + + +HG VIK D + T LL++Y C + +A
Sbjct: 233 LVEGNQYTLGSLVTACTKLGALHQGKWVHGYVIKSGFDLNSFLVTPLLDLYFKCGDIRDA 292
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLS 269
S+FDE+ + D+VSW MI GY Q
Sbjct: 293 FSVFDELS-------------------------------TIDLVSWTAMIVGYAQRGYPR 321
Query: 270 EALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATII 329
EAL ++ + PN V ++SAC + + G +H + +K G + AT
Sbjct: 322 EALKLFTDERWKDLLPNTVTTSSVLSACAQTGSLNMGRSVHCLGIKLGSE-----DAT-- 374
Query: 330 HFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSA 389
FE NAL+ + + MI DAR +F + +DV +W++
Sbjct: 375 ---------------FE----------NALVDMYAKCHMIGDARYVFETVFDKDVIAWNS 409
Query: 390 MISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNS 449
+ISGY QN ALELF M V P+ IT+VSV A AS G + G H Y +
Sbjct: 410 IISGYTQNGYAYEALELFDQMRSDSVYPDAITLVSVLSACASVGAYRVGSSLHGYAIKAG 469
Query: 450 ITLND-NLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLK 508
+ + A+++ YAKCG +A +F + ++ T W+A+I G + GD + +L+
Sbjct: 470 LLSGSVYVGTALLNFYAKCGDAESARVIFDEMGEKNTIT--WSAMIGGYGIQGDCSRSLE 527
Query: 509 IYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLL 568
++ D+ K ++ N + F +LS C H+G++ G RYF +M VYN P +KHY CMVDLL
Sbjct: 528 LFGDMLKEKLEPNEVIFTTILSACSHSGMLGEGWRYFNTMCQVYNFVPSMKHYACMVDLL 587
Query: 569 GRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRV 628
RAG+LE+A + I +P++ DV + G L R+H ++GE A + + L P V
Sbjct: 588 ARAGRLEEALDFIEKIPIQPDVSLLGAFLHGCRLHSRFDLGEVAVRRMLELHPDKACYYV 647
Query: 629 LLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
L+SN+YA GRW A + + M+ G+ +LPG+S V
Sbjct: 648 LMSNLYASEGRWSQANQVMELMKQRGLAKLPGWSLV 683
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 133/503 (26%), Positives = 228/503 (45%), Gaps = 106/503 (21%)
Query: 9 VFNSQKANL-QNSDYEL-ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLIN 66
+FN + L + + Y L +LV+A C+ A+ QG+ +H + KSG + N+F+ L++
Sbjct: 225 LFNRMREGLVEGNQYTLGSLVTA---CTKLGALHQGKWVHGYVIKSGFDLNSFLVTPLLD 281
Query: 67 LYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSM 126
LY KCG I A S+FD ST+D V+ MI GY
Sbjct: 282 LYFKCGDIRDAFSVFDELSTIDLVSWTAMIVGY--------------------------- 314
Query: 127 IMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMI 186
AQ REAL++F D R ++PN VT +SV+S+ G + R +H L IKL
Sbjct: 315 ----AQRGYPREALKLFTDERWKDLLPNTVTTSSVLSACAQTGSLNMGRSVHCLGIKLGS 370
Query: 187 DGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFER 246
+ L++MY C + +AR +F+ + ++++++WN +++G+ + G A ELF++
Sbjct: 371 ED-ATFENALVDMYAKCHMIGDARYVFETVFDKDVIAWNSIISGYTQNGYAYEALELFDQ 429
Query: 247 IPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEG 306
+ S D + P+ + +V ++SAC A+ G
Sbjct: 430 MRS-------------------------------DSVYPDAITLVSVLSACASVGAYRVG 458
Query: 307 LQIHSIIVKAG-FDCYDFIQATIIHFYAACGRINLARLQF-ELGIKDHIASWNALIAGFI 364
+H +KAG ++ +++FYA CG AR+ F E+G K+ I +W+A+I G+
Sbjct: 459 SSLHGYAIKAGLLSGSVYVGTALLNFYAKCGDAESARVIFDEMGEKNTI-TWSAMIGGY- 516
Query: 365 RNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVS 424
G+ D + +LELF M+ ++PNE+ +
Sbjct: 517 --GIQGDCSR----------------------------SLELFGDMLKEKLEPNEVIFTT 546
Query: 425 VFCAIASSGTLKEGRWAHEYVLNNSITLNDNLS--AAIIDMYAKCGSINTAFEVFYHIRD 482
+ A + SG L EG W + + ++ A ++D+ A+ G + A + I
Sbjct: 547 ILSACSHSGMLGEG-WRYFNTMCQVYNFVPSMKHYACMVDLLARAGRLEEALDFIEKIPI 605
Query: 483 RTTSVSPWNAIICGLAMHGDANL 505
+ VS A + G +H +L
Sbjct: 606 Q-PDVSLLGAFLHGCRLHSRFDL 627
>gi|296090723|emb|CBI41122.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 318 bits (816), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 184/556 (33%), Positives = 295/556 (53%), Gaps = 62/556 (11%)
Query: 108 AREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVH 167
A +VFDK P + V++T MI FAQ C R+A+++F DM + G +P+ T +SV+S+
Sbjct: 9 AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 68
Query: 168 LGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVM 227
LG + + LH VI+L + V + +L++MY C
Sbjct: 69 LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKC------------------------ 104
Query: 228 LNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQV-ERLSEALTMYRAMLCDGIAPN 286
A G V+ +R++FE++P +V+SW +I Y Q E EA+ ++ M+ I PN
Sbjct: 105 ----AADGSVDDSRKVFEQMPEHNVMSWTAIITAYAQSGECDKEAIELFCKMISGHIRPN 160
Query: 287 DVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFE 346
++ ACG G Q++S VK
Sbjct: 161 HFSFSSVLKACGNLSDPYTGEQVYSYAVK------------------------------- 189
Query: 347 LGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALEL 406
LGI N+LI+ + R+G +EDAR+ F+ + ++++ S++A++ GYA+N + A L
Sbjct: 190 LGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLL 249
Query: 407 FHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAK 466
F+ + D G+ + T S+ AS G + +G H +L N + A+I MY++
Sbjct: 250 FNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSR 309
Query: 467 CGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFI 526
CG+I AF+VF + DR +V W ++I G A HG A L+++ + + K N IT++
Sbjct: 310 CGNIEAAFQVFNEMEDR--NVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYV 367
Query: 527 GVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPM 586
VLS C H G++ G+++F SM + + P ++HY CMVDLLGR+G L +A E I SMP+
Sbjct: 368 AVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPL 427
Query: 587 KADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSI 646
AD ++W TLL A R+HGN E+G AA+ + +P + +LLSN++A AG+W+D I
Sbjct: 428 MADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKI 487
Query: 647 RKEMRDCGMKRLPGFS 662
RK M++ + + G S
Sbjct: 488 RKSMKERNLIKEAGCS 503
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 115/480 (23%), Positives = 201/480 (41%), Gaps = 93/480 (19%)
Query: 28 SALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTL 87
S L C+ ++ G+Q+HS + + GL + + SL+++YAKC
Sbjct: 61 SVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAA-------------- 106
Query: 88 DPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQN-DCWREALEVFRDM 146
+ ++D+R+VF++ P +S+T++I +AQ+ +C +EA+E+F M
Sbjct: 107 --------------DGSVDDSRKVFEQMPEHNVMSWTAIITAYAQSGECDKEAIELFCKM 152
Query: 147 RILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSL 206
+ PN + +SV+ + +L + ++ +KL I + +L++MY +
Sbjct: 153 ISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRM 212
Query: 207 VEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVE 266
+AR FD + E+N+VS+N +++G+AK E A LF I
Sbjct: 213 EDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADT---------------- 256
Query: 267 RLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQA 326
GI + L+S A G+G QIH ++K G+ I
Sbjct: 257 ---------------GIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICN 301
Query: 327 TIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYS 386
+I Y+ CG I A F ++ SW ++I GF ++G
Sbjct: 302 ALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGF------------------ 343
Query: 387 WSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG-RWAHEYV 445
ALE+FH M++ G KPNEIT V+V A + G + EG + +
Sbjct: 344 -------------ATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMY 390
Query: 446 LNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANL 505
+ I A ++D+ + G + A E F + W ++ +HG+ L
Sbjct: 391 KEHGIVPRMEHYACMVDLLGRSGLLVEAME-FINSMPLMADALVWRTLLGACRVHGNTEL 449
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 118/283 (41%), Gaps = 62/283 (21%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+ S L+ C G+Q++S K G+ S + NSLI++YA+ G + A+ FD
Sbjct: 162 FSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDI 221
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
+ V+ N ++ GY +N + EA +F
Sbjct: 222 LFEKNLVSYNAIVDGYAKNLKS-------------------------------EEAFLLF 250
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
++ G+ + T AS++S + +G + + +HG ++K I L++MY C
Sbjct: 251 NEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRC 310
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYL 263
++ A +F+EM++RN++SW M+ GFAK G
Sbjct: 311 GNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFA-------------------------- 344
Query: 264 QVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEG 306
+ AL M+ ML G PN++ V ++SAC EG
Sbjct: 345 -----TRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEG 382
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 96/222 (43%), Gaps = 45/222 (20%)
Query: 38 AVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMIS 97
A+ +G+QIH + K G +SN I CN +IS
Sbjct: 277 AMGKGEQIHGRLLKGGYKSNQCI-------------------------------CNALIS 305
Query: 98 GYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVT 157
Y R + A +VF++ + +S+TSMI GFA++ ALE+F M G PNE+T
Sbjct: 306 MYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEIT 365
Query: 158 LASVISSSVHLGGIWECRML-------HGLVIKLMIDGFVIISTNLLNMYCVCSSLVEAR 210
+V+S+ H+G I E + HG+V ++ + + ++++ LVEA
Sbjct: 366 YVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRM--EHYAC----MVDLLGRSGLLVEAM 419
Query: 211 SLFDEMK-ERNIVSWNVMLNGFAKAGLVELARELFERIPSKD 251
+ M + + W +L G EL R E I ++
Sbjct: 420 EFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQE 461
>gi|356569698|ref|XP_003553033.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Glycine max]
Length = 824
Score = 318 bits (816), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 196/628 (31%), Positives = 318/628 (50%), Gaps = 95/628 (15%)
Query: 35 AHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNI 94
A ++++ G+++H + K G E + ++ SLI+LY++ G + A
Sbjct: 159 ACLSLADGEKMHCWVLKMGFEHDVYVAASLIHLYSRFGAVEVA----------------- 201
Query: 95 MISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPN 154
+VF P++ S+ +MI GF QN EAL V M+ V +
Sbjct: 202 --------------HKVFVDMPVRDVGSWNAMISGFCQNGNVAEALRVLDRMKTEEVKMD 247
Query: 155 EVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFD 214
VT++S++ + ++H VIK ++ V +S L+NMY
Sbjct: 248 TVTVSSMLPICAQSNDVVGGVLVHLYVIKHGLESDVFVSNALINMY-------------- 293
Query: 215 EMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTM 274
+K G ++ A+ +F+ + +D+VSW ++I Y Q + AL
Sbjct: 294 -----------------SKFGRLQDAQRVFDGMEVRDLVSWNSIIAAYEQNDDPVTALGF 336
Query: 275 YRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAA 334
++ ML G+ P+ + +V L S G+ G +H +V+ +
Sbjct: 337 FKEMLFVGMRPDLLTVVSLASIFGQLSDRRIGRAVHGFVVRCRW---------------- 380
Query: 335 CGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGY 394
L+ ++ I NAL+ + + G I+ AR +F + RDV SW+ +I+GY
Sbjct: 381 --------LEVDIVIG------NALVNMYAKLGSIDCARAVFEQLPSRDVISWNTLITGY 426
Query: 395 AQNEQPNMALELFHGMVDA-GVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLN 453
AQN + A++ ++ M + + PN+ T VS+ A + G L++G H ++ N + L+
Sbjct: 427 AQNGLASEAIDAYNMMEEGRTIVPNQGTWVSILPAYSHVGALQQGMKIHGRLIKNCLFLD 486
Query: 454 DNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDL 513
++ +IDMY KCG + A +FY I T+ PWNAII L +HG L+++ D+
Sbjct: 487 VFVATCLIDMYGKCGRLEDAMSLFYEIPQETSV--PWNAIISSLGIHGHGEKALQLFKDM 544
Query: 514 EKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQ 573
+K + ITF+ +LS C H+GLVD + F +M+ Y ++P+LKHYGCMVDL GRAG
Sbjct: 545 RADGVKADHITFVSLLSACSHSGLVDEAQWCFDTMQKEYRIKPNLKHYGCMVDLFGRAGY 604
Query: 574 LEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNI 633
LE A ++ +MP++AD IWGTLLAA RIHGN E+G A+ L + + VLLSNI
Sbjct: 605 LEKAYNLVSNMPIQADASIWGTLLAACRIHGNAELGTFASDRLLEVDSENVGYYVLLSNI 664
Query: 634 YADAGRWEDAFSIRKEMRDCGMKRLPGF 661
YA+ G+WE A +R RD G+++ PG+
Sbjct: 665 YANVGKWEGAVKVRSLARDRGLRKTPGW 692
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 123/483 (25%), Positives = 208/483 (43%), Gaps = 101/483 (20%)
Query: 28 SALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTL 87
S L C+ V G +H + K GLES+ F+ N+LIN+Y+K G + A+ +FD
Sbjct: 253 SMLPICAQSNDVVGGVLVHLYVIKHGLESDVFVSNALINMYSKFGRLQDAQRVFDGMEVR 312
Query: 88 DPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMR 147
D V+ N +I+ Y +ND P+ AL F++M
Sbjct: 313 DLVSWNSIIAAYEQND-----------DPVT--------------------ALGFFKEML 341
Query: 148 ILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIK---LMIDGFVIISTNLLNMYCVCS 204
+G+ P+ +T+ S+ S L R +HG V++ L +D ++I L+NMY
Sbjct: 342 FVGMRPDLLTVVSLASIFGQLSDRRIGRAVHGFVVRCRWLEVD--IVIGNALVNMYAKLG 399
Query: 205 SLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQ 264
S+ AR++F+++ R+++SWN ++ G+A+ GL A ID Y
Sbjct: 400 SIDCARAVFEQLPSRDVISWNTLITGYAQNGLASEA------------------IDAYNM 441
Query: 265 VERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFI 324
+E E T I PN V ++ A A +G++IH ++K F+
Sbjct: 442 ME---EGRT---------IVPNQGTWVSILPAYSHVGALQQGMKIHGRLIKNCLFLDVFV 489
Query: 325 QATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDV 384
+I Y CGR +EDA LF + +
Sbjct: 490 ATCLIDMYGKCGR-------------------------------LEDAMSLFYEIPQETS 518
Query: 385 YSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEY 444
W+A+IS + AL+LF M GVK + IT VS+ A + SG + E +W +
Sbjct: 519 VPWNAIISSLGIHGHGEKALQLFKDMRADGVKADHITFVSLLSACSHSGLVDEAQWCFD- 577
Query: 445 VLNNSITLNDNLS--AAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGD 502
+ + NL ++D++ + G + A+ + ++ + + S W ++ +HG+
Sbjct: 578 TMQKEYRIKPNLKHYGCMVDLFGRAGYLEKAYNLVSNMPIQADA-SIWGTLLAACRIHGN 636
Query: 503 ANL 505
A L
Sbjct: 637 AEL 639
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 109/473 (23%), Positives = 221/473 (46%), Gaps = 87/473 (18%)
Query: 217 KERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYR 276
K +++V ++ +A G + L+ F+ I K++ SW +M+ Y++ R +++
Sbjct: 79 KAQDVVLLTQLVTLYATLGDLSLSSTTFKHIQRKNIFSWNSMVSAYVRRGRYRDSMDCVT 138
Query: 277 AMLC-DGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAAC 335
+L G+ P+ ++ AC ++ +G ++H ++K GF+ ++ A++IH Y+
Sbjct: 139 ELLSLSGVRPDFYTFPPVLKAC---LSLADGEKMHCWVLKMGFEHDVYVAASLIHLYSRF 195
Query: 336 GRINLARLQF-ELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ-------------- 380
G + +A F ++ ++D + SWNA+I+GF +NG + +A ++ + M+
Sbjct: 196 GAVEVAHKVFVDMPVRD-VGSWNAMISGFCQNGNVAEALRVLDRMKTEEVKMDTVTVSSM 254
Query: 381 -------------------------KRDVYSWSAMISGYAQNEQPNMALELFHGM----- 410
+ DV+ +A+I+ Y++ + A +F GM
Sbjct: 255 LPICAQSNDVVGGVLVHLYVIKHGLESDVFVSNALINMYSKFGRLQDAQRVFDGMEVRDL 314
Query: 411 -----VDAGVKPNE---------------------ITMVSVFCAIASSGTLKEGRWAHEY 444
+ A + N+ +T+VS+ + GR H +
Sbjct: 315 VSWNSIIAAYEQNDDPVTALGFFKEMLFVGMRPDLLTVVSLASIFGQLSDRRIGRAVHGF 374
Query: 445 VLN-NSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDA 503
V+ + ++ + A+++MYAK GSI+ A VF + R V WN +I G A +G A
Sbjct: 375 VVRCRWLEVDIVIGNALVNMYAKLGSIDCARAVFEQLPSR--DVISWNTLITGYAQNGLA 432
Query: 504 NLTLKIYSDLEK-RNIKLNSITFIGVLSTCCHAGLVDLGER-YFKSMKSVYNVEPDLKHY 561
+ + Y+ +E+ R I N T++ +L H G + G + + + +K+ + D+
Sbjct: 433 SEAIDAYNMMEEGRTIVPNQGTWVSILPAYSHVGALQQGMKIHGRLIKNCLFL--DVFVA 490
Query: 562 GCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAK 614
C++D+ G+ G+LEDA + +P + V W ++++ IHG+ GE+A +
Sbjct: 491 TCLIDMYGKCGRLEDAMSLFYEIPQETSVP-WNAIISSLGIHGH---GEKALQ 539
>gi|296085005|emb|CBI28420.3| unnamed protein product [Vitis vinifera]
Length = 631
Score = 318 bits (816), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 165/436 (37%), Positives = 260/436 (59%), Gaps = 14/436 (3%)
Query: 240 ARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGR 299
AR +F+RI + ++ W T+I Y++ + + + ++ ++ + + P++ + +I C R
Sbjct: 69 ARSIFDRIQRRSLIHWNTIIKCYVENQFSHDGIVLFHELVHEYL-PDNFTLPCVIKGCAR 127
Query: 300 AMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGI-KD------- 351
EG QIH + +K GF F+Q ++++ Y+ CG I+ AR F+ I KD
Sbjct: 128 LGVVQEGKQIHGLALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSL 187
Query: 352 ---HIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFH 408
++ SWNA+I G++++G + A +LF M D+ +W+ MI+GY N Q A+++F
Sbjct: 188 IDGNLVSWNAMINGYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFF 247
Query: 409 GMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCG 468
M+ G +P+ T+VSV A++ L +GRW H Y+ N L+ L ++I+MYAKCG
Sbjct: 248 MMLKLGSRPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCG 307
Query: 469 SINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGV 528
I +A VF I+ + V W AII GL +HG AN L ++ ++ K +K N+I FIGV
Sbjct: 308 CIESALTVFRAIQKK--KVGHWTAIIVGLGIHGMANHALALFLEMCKTGLKPNAIIFIGV 365
Query: 529 LSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKA 588
L+ C HAGLVD G +YF M + Y +EP L+HYGC+VD+L RAG LE+A+ I +MP+
Sbjct: 366 LNACNHAGLVDDGRQYFDMMMNEYKIEPTLEHYGCLVDILCRAGHLEEAKNTIENMPISP 425
Query: 589 DVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRK 648
+ VIW +LL SR HG +++GE AA+ + + P +LLSN+YA +G WE +R+
Sbjct: 426 NKVIWMSLLGGSRNHGKIDIGEYAAQRVIEVAPETIGCYILLSNMYAASGMWEKVSHVRE 485
Query: 649 EMRDCGMKRLPGFSGV 664
M G ++ PG S V
Sbjct: 486 MMYKRGFRKDPGCSSV 501
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 132/519 (25%), Positives = 222/519 (42%), Gaps = 93/519 (17%)
Query: 3 LDHFHSVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQN 62
L FHS+ NL +S + CSA V +Q+H+ K+ + ++ F+ +
Sbjct: 4 LTPFHSLQQYLPHNLH--------LSLFQTCSAPQEV---EQLHAFSLKTAIFNHPFVSS 52
Query: 63 SLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVS 122
L+ LY+ DP + + L AR +FD+ + +
Sbjct: 53 RLLALYS------------------DP-----------KINDLGYARSIFDRIQRRSLIH 83
Query: 123 YTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVI 182
+ ++I + +N + + +F ++ + +P+ TL VI LG + E + +HGL +
Sbjct: 84 WNTIIKCYVENQFSHDGIVLFHEL-VHEYLPDNFTLPCVIKGCARLGVVQEGKQIHGLAL 142
Query: 183 KLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKER-----------NIVSWNVMLNGF 231
K+ V + +L+NMY C + AR +FD M ++ N+VSWN M+NG+
Sbjct: 143 KIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGNLVSWNAMINGY 202
Query: 232 AKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIV 291
K+G + A ELF ++P D+V+W MI GY + +A+ M+ ML G P+ +V
Sbjct: 203 MKSGDFDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGSRPSHATLV 262
Query: 292 DLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKD 351
++SA G+G IHS + K GF+ + ++I YA CG I A F K
Sbjct: 263 SVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIESALTVFRAIQKK 322
Query: 352 HIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMV 411
+ W A+I G +GM N AL LF M
Sbjct: 323 KVGHWTAIIVGLGIHGM-------------------------------ANHALALFLEMC 351
Query: 412 DAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNN-SITLNDNLSAAIIDMYAKCGSI 470
G+KPN I + V A +G + +GR + ++N I ++D+ + G +
Sbjct: 352 KTGLKPNAIIFIGVLNACNHAGLVDDGRQYFDMMMNEYKIEPTLEHYGCLVDILCRAGHL 411
Query: 471 NTAFEVFYHIRDRTTSVSP----WNAIICGLAMHGDANL 505
A +SP W +++ G HG ++
Sbjct: 412 EEAKNTI-----ENMPISPNKVIWMSLLGGSRNHGKIDI 445
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 98/229 (42%), Gaps = 41/229 (17%)
Query: 25 ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSC 84
LVS L S + +G+ IHS + K+G E + + SLI +YAKCG I A ++F +
Sbjct: 260 TLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIESALTVFRA- 318
Query: 85 STLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFR 144
I+ ++ +T++I+G + AL +F
Sbjct: 319 ---------------IQKKKVG---------------HWTAIIVGLGIHGMANHALALFL 348
Query: 145 DMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIIST-----NLLNM 199
+M G+ PN + V+++ H G + + R +M++ + I T L+++
Sbjct: 349 EMCKTGLKPNAIIFIGVLNACNHAGLVDDGRQ----YFDMMMNEYKIEPTLEHYGCLVDI 404
Query: 200 YCVCSSLVEARSLFDEMK-ERNIVSWNVMLNGFAKAGLVELARELFERI 247
C L EA++ + M N V W +L G G +++ +R+
Sbjct: 405 LCRAGHLEEAKNTIENMPISPNKVIWMSLLGGSRNHGKIDIGEYAAQRV 453
>gi|357118484|ref|XP_003560984.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
mitochondrial-like [Brachypodium distachyon]
Length = 678
Score = 318 bits (816), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 197/641 (30%), Positives = 316/641 (49%), Gaps = 100/641 (15%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
LAL +A+R G+++H + K+G + F+ N+L+++YAK G
Sbjct: 133 LALKAAVRSAD----FGYGRRLHCDVVKAG-GGDLFVMNNLVDMYAKGG----------- 176
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
L +AR+VFD+ P + VS+TSM+ G QN +E L +F
Sbjct: 177 --------------------DLKNARKVFDRIPDRNVVSWTSMLSGCLQNGLAKEGLVLF 216
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
+MR ++P+E T+ASV+ + LG + + R++HG V+K + I+ +L+MY C
Sbjct: 217 NEMRQESILPSEYTMASVLMACTMLGSLHQGRLIHGSVMKHGLVSNHFITAAMLDMYVKC 276
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYL 263
G E AR++F+ + D+V W TMI GY
Sbjct: 277 -------------------------------GEAEDARQVFDELSFVDLVLWTTMIVGYT 305
Query: 264 QVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDF 323
Q +AL ++ I PN V I ++SA + G IH I VK G D
Sbjct: 306 QNGSPLDALLLFVDDKFMRIVPNSVTIATVLSASAQLRNLSLGRSIHGISVKLGAVENDV 365
Query: 324 IQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRD 383
+ ++ YA C ++ DA+ +F + +D
Sbjct: 366 VMNALVDMYAKCKALS-------------------------------DAKGIFGRVLNKD 394
Query: 384 VYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHE 443
V +W+++I+GYA+N+ + AL LF M G P+ I++V+ A G L G+ H
Sbjct: 395 VVTWNSLIAGYAENDMGSDALMLFSHMRVQGSLPDAISVVNALSACVCLGDLLIGKCFHT 454
Query: 444 YVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDA 503
Y + ++ N ++ A++++Y KC + +A VF + DR T W A+I G M GD+
Sbjct: 455 YAVKHAFMSNIYVNTALLNLYNKCADLPSAQRVFSEMNDRNTVT--WGAMIGGYGMQGDS 512
Query: 504 NLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGC 563
++ +++++ K NI+ N F +LSTC H G+V +G++ F+SM +N+ P +KHY C
Sbjct: 513 AGSIDLFNEMLKDNIQPNEAVFTSILSTCSHTGMVTVGKKCFESMAHYFNITPSMKHYAC 572
Query: 564 MVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSH 623
MVD+L RAG LE+A E I+ MPM+AD IW L ++H +E E A + L P
Sbjct: 573 MVDVLARAGNLEEALEFIQKMPMQADTSIWQAFLHGCKLHSRLEFAEEAVNRMMVLHPDT 632
Query: 624 GPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
V++SN+Y GRW+ + +IRK M++ G+ +LPG S V
Sbjct: 633 PDFCVMMSNLYTSYGRWDKSLAIRKLMKERGLVKLPGCSSV 673
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 118/497 (23%), Positives = 219/497 (44%), Gaps = 104/497 (20%)
Query: 9 VFNS-QKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINL 67
+FN ++ ++ S+Y +A S L C+ ++ QG+ IH + K GL SN FI +++++
Sbjct: 215 LFNEMRQESILPSEYTMA--SVLMACTMLGSLHQGRLIHGSVMKHGLVSNHFITAAMLDM 272
Query: 68 YAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMI 127
Y KCG A+ +FD S +D V MI GY +N +P+
Sbjct: 273 YVKCGEAEDARQVFDELSFVDLVLWTTMIVGYTQNG-----------SPL---------- 311
Query: 128 MGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMID 187
+AL +F D + + ++PN VT+A+V+S+S L + R +HG+ +KL
Sbjct: 312 ----------DALLLFVDDKFMRIVPNSVTIATVLSASAQLRNLSLGRSIHGISVKLGAV 361
Query: 188 GFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERI 247
++ L++MY C +L +A+ +F + +++V+WN
Sbjct: 362 ENDVVMNALVDMYAKCKALSDAKGIFGRVLNKDVVTWN---------------------- 399
Query: 248 PSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGE-- 305
++I GY + + S+AL ++ M G P+ + +V+ +SAC + G+
Sbjct: 400 ---------SLIAGYAENDMGSDALMLFSHMRVQGSLPDAISVVNALSAC---VCLGDLL 447
Query: 306 -GLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFI 364
G H+ VK F ++ +++ Y C + A+
Sbjct: 448 IGKCFHTYAVKHAFMSNIYVNTALLNLYNKCADLPSAQ---------------------- 485
Query: 365 RNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVS 424
++F+ M R+ +W AMI GY +++LF+ M+ ++PNE S
Sbjct: 486 ---------RVFSEMNDRNTVTWGAMIGGYGMQGDSAGSIDLFNEMLKDNIQPNEAVFTS 536
Query: 425 VFCAIASSGTLKEGRWAHEYVLNN-SITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDR 483
+ + +G + G+ E + + +IT + A ++D+ A+ G++ A E F
Sbjct: 537 ILSTCSHTGMVTVGKKCFESMAHYFNITPSMKHYACMVDVLARAGNLEEALE-FIQKMPM 595
Query: 484 TTSVSPWNAIICGLAMH 500
S W A + G +H
Sbjct: 596 QADTSIWQAFLHGCKLH 612
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 127/514 (24%), Positives = 214/514 (41%), Gaps = 71/514 (13%)
Query: 95 MISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPN 154
++S Y L AR V D+TP +Y + A EA+ V RDMR
Sbjct: 66 LLSCYAALGDLASARRVLDETPHPDAYTYKVALGWHAAAGRHAEAVAVHRDMRRRCPAEQ 125
Query: 155 E--VTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSL 212
E V L+ + ++V R LH V+K G + + NL++MY L AR +
Sbjct: 126 EDVVVLSLALKAAVRSADFGYGRRLHCDVVKAG-GGDLFVMNNLVDMYAKGGDLKNARKV 184
Query: 213 FDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEAL 272
FD + +RN+VSW ML+G + GL + E L
Sbjct: 185 FDRIPDRNVVSWTSMLSGCLQNGLAK-------------------------------EGL 213
Query: 273 TMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFY 332
++ M + I P++ + ++ AC + +G IH ++K G FI A ++ Y
Sbjct: 214 VLFNEMRQESILPSEYTMASVLMACTMLGSLHQGRLIHGSVMKHGLVSNHFITAAMLDMY 273
Query: 333 AACGRINLARLQF-ELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMI 391
CG AR F EL D + W +I G+ +NG DA LF +
Sbjct: 274 VKCGEAEDARQVFDELSFVD-LVLWTTMIVGYTQNGSPLDALLLFVD------------- 319
Query: 392 SGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSIT 451
+ F +V PN +T+ +V A A L GR H +
Sbjct: 320 -------------DKFMRIV-----PNSVTIATVLSASAQLRNLSLGRSIHGISVKLGAV 361
Query: 452 LNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYS 511
ND + A++DMYAKC +++ A +F + ++ V WN++I G A + + L ++S
Sbjct: 362 ENDVVMNALVDMYAKCKALSDAKGIFGRVLNK--DVVTWNSLIAGYAENDMGSDALMLFS 419
Query: 512 DLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRA 571
+ + ++I+ + LS C G + +G + F + + ++ +++L +
Sbjct: 420 HMRVQGSLPDAISVVNALSACVCLGDLLIG-KCFHTYAVKHAFMSNIYVNTALLNLYNKC 478
Query: 572 GQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGN 605
L A+ V M + + V WG ++ + G+
Sbjct: 479 ADLPSAQRVFSEMNDR-NTVTWGAMIGGYGMQGD 511
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 101/402 (25%), Positives = 179/402 (44%), Gaps = 42/402 (10%)
Query: 203 CSSLVEARSLFDEMKE----RNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTM 258
C++L R+L + R + + +L+ +A G + AR + + P D ++
Sbjct: 38 CTTLPSLRALHARLLAHGLLRGLRAHTKLLSCYAALGDLASARRVLDETPHPDAYTYKVA 97
Query: 259 IDGYLQVERLSEALTMYRAMLCDGIAPN-DVMIVDL-ISACGRAMAFGEGLQIHSIIVKA 316
+ + R +EA+ ++R M A DV+++ L + A R+ FG G ++H +VKA
Sbjct: 98 LGWHAAAGRHAEAVAVHRDMRRRCPAEQEDVVVLSLALKAAVRSADFGYGRRLHCDVVKA 157
Query: 317 GFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLF 376
G F+ ++ YA G + AR F+ ++ SW ++++G ++NG+ ++ LF
Sbjct: 158 GGGDL-FVMNNLVDMYAKGGDLKNARKVFDRIPDRNVVSWTSMLSGCLQNGLAKEGLVLF 216
Query: 377 NNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLK 436
N M++ + P+E TM SV A G+L
Sbjct: 217 NEMRQESIL-------------------------------PSEYTMASVLMACTMLGSLH 245
Query: 437 EGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICG 496
+GR H V+ + + N ++AA++DMY KCG A +VF + + W +I G
Sbjct: 246 QGRLIHGSVMKHGLVSNHFITAAMLDMYVKCGEAEDARQVFDEL--SFVDLVLWTTMIVG 303
Query: 497 LAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEP 556
+G L ++ D + I NS+T VLS + LG + VE
Sbjct: 304 YTQNGSPLDALLLFVDDKFMRIVPNSVTIATVLSASAQLRNLSLGRSIHGISVKLGAVEN 363
Query: 557 DLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLA 598
D+ +VD+ + L DA+ + + + DVV W +L+A
Sbjct: 364 DVV-MNALVDMYAKCKALSDAKGIFGRV-LNKDVVTWNSLIA 403
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 112/272 (41%), Gaps = 35/272 (12%)
Query: 348 GIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELF 407
G++ H L++ + G + AR++ + D Y++ + +A + A+ +
Sbjct: 59 GLRAH----TKLLSCYAALGDLASARRVLDETPHPDAYTYKVALGWHAAAGRHAEAVAVH 114
Query: 408 HGMVDAGVKPNE--ITMVSVFCAIASSGTLKEGRWAH----------EYVLNNSITLNDN 455
M E + + A S GR H +V+NN
Sbjct: 115 RDMRRRCPAEQEDVVVLSLALKAAVRSADFGYGRRLHCDVVKAGGGDLFVMNN------- 167
Query: 456 LSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEK 515
++DMYAK G + A +VF I DR +V W +++ G +G A L +++++ +
Sbjct: 168 ----LVDMYAKGGDLKNARKVFDRIPDR--NVVSWTSMLSGCLQNGLAKEGLVLFNEMRQ 221
Query: 516 RNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHY--GCMVDLLGRAGQ 573
+I + T VL C G + G S+ V H+ M+D+ + G+
Sbjct: 222 ESILPSEYTMASVLMACTMLGSLHQGRLIHGSVMKHGLVS---NHFITAAMLDMYVKCGE 278
Query: 574 LEDAEEVIRSMPMKADVVIWGTLLAASRIHGN 605
EDA +V + D+V+W T++ +G+
Sbjct: 279 AEDARQVFDELSF-VDLVLWTTMIVGYTQNGS 309
>gi|218195439|gb|EEC77866.1| hypothetical protein OsI_17132 [Oryza sativa Indica Group]
Length = 865
Score = 318 bits (816), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 190/634 (29%), Positives = 320/634 (50%), Gaps = 34/634 (5%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
++ C A Q+ L +K + ++ +L++++ +CG + A +F
Sbjct: 145 MKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTI 204
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
N M++GY + ++ A E F+ + VS+ MI +Q+ REAL + +M
Sbjct: 205 FCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRK 264
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
GV + T S +++ L + + LH VI+ + +++ L+ +Y C S EA
Sbjct: 265 GVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEA 324
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLS 269
+ +F + ++ VSW +I G LQ E S
Sbjct: 325 K-------------------------------RVFNSLQDRNSVSWTVLIGGSLQYECFS 353
Query: 270 EALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATII 329
+++ ++ M + +A + + LIS C M G Q+HS+ +K+G + + ++I
Sbjct: 354 KSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLI 413
Query: 330 HFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSA 389
YA CG + A F + I SW ++I + + G I AR+ F+ M R+ +W+A
Sbjct: 414 SLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMDTRNAITWNA 473
Query: 390 MISGYAQNEQPNMALELFHGMV-DAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNN 448
M+ Y Q+ L+++ M+ V P+ +T V++F A G K G + +
Sbjct: 474 MLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKA 533
Query: 449 SITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLK 508
+ LN +++ A I MY+KCG I+ A ++F + + V WNA+I G + HG K
Sbjct: 534 GLILNVSVANAAITMYSKCGRISEAQKLFDLLNGK--DVVSWNAMITGYSQHGMGKQAAK 591
Query: 509 IYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLL 568
+ D+ + K + I+++ VLS C H+GLV G+ YF M V+ + P L+H+ CMVDLL
Sbjct: 592 TFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLL 651
Query: 569 GRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRV 628
GRAG L +A+++I MPMK +WG LL+A +IHGN E+ E AAK + L S +
Sbjct: 652 GRAGHLTEAKDLIDKMPMKPTAEVWGALLSACKIHGNDELAELAAKHVFELDSPDSGSYM 711
Query: 629 LLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
LL+ IY+DAG+ +D+ +RK MRD G+K+ PG+S
Sbjct: 712 LLAKIYSDAGKSDDSAQVRKLMRDKGIKKNPGYS 745
Score = 208 bits (529), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 159/627 (25%), Positives = 285/627 (45%), Gaps = 74/627 (11%)
Query: 25 ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS- 83
AL ALR C + A++ + +H + GL S F+QN+L++ Y CG +S A+ + +
Sbjct: 6 ALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYFSCGALSDARRLLRAD 65
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
+ + NIM++GY + L+DA E+FD+ P + S+ +++ G+ Q + + LE F
Sbjct: 66 IKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETF 125
Query: 144 RDMRILG-VIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
M G +PN T V+ S LG L GL K G + T L++M+
Sbjct: 126 VSMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVR 185
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
C + A LF +++ I N ML G+AK ++ A E FE + +DVVSW MI
Sbjct: 186 CGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAAL 245
Query: 263 LQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD 322
Q R+ EAL + M G+ + ++AC R + G G Q+H+ ++++
Sbjct: 246 SQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDP 305
Query: 323 FIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKR 382
++ + +I YA CG ++A+++FN++Q R
Sbjct: 306 YVASALIELYAKCGS-------------------------------FKEAKRVFNSLQDR 334
Query: 383 DVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAH 442
+ SW+ +I G Q E + ++ELF+ M + ++ + ++ + L GR H
Sbjct: 335 NSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLH 394
Query: 443 EYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDR------------------- 483
L + +S ++I +YAKCG + A VF + +R
Sbjct: 395 SLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNII 454
Query: 484 ----------TTSVSPWNAIICGLAMHGDANLTLKIYSD-LEKRNIKLNSITFIGVLSTC 532
T + WNA++ HG LK+YS L ++++ + +T++ + C
Sbjct: 455 KAREFFDGMDTRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGC 514
Query: 533 CHAGLVDLGERYF-KSMKS--VYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKAD 589
G LG++ ++K+ + NV + + + G++ +A+++ + K D
Sbjct: 515 ADIGANKLGDQIIGHTVKAGLILNVSV----ANAAITMYSKCGRISEAQKLFDLLNGK-D 569
Query: 590 VVIWGTLLAASRIHGNVEVGERAAKSL 616
VV W ++ HG +G++AAK+
Sbjct: 570 VVSWNAMITGYSQHG---MGKQAAKTF 593
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 105/396 (26%), Positives = 182/396 (45%), Gaps = 24/396 (6%)
Query: 9 VFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLY 68
+FN +A L D + AL + + C + + G+Q+HSL KSG + NSLI+LY
Sbjct: 358 LFNQMRAELMAID-QFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLY 416
Query: 69 AKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIM 128
AKCG + A+ +F S S D V+ MI+ Y + + ARE FD + +++ +M+
Sbjct: 417 AKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMDTRNAITWNAMLG 476
Query: 129 GFAQNDCWREALEVFRDM-RILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMID 187
+ Q+ + L+++ M V P+ VT ++ +G + G +K +
Sbjct: 477 AYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLI 536
Query: 188 GFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERI 247
V ++ + MY C + EA+ LFD + +++VSWN M+ G+++ G+ + A + F+ +
Sbjct: 537 LNVSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDM 596
Query: 248 PSK----DVVSWGTMIDGYLQVERLSEALTMYRAML-CDGIAPNDVMIVDLISACGRAMA 302
SK D +S+ ++ G + E + M GI+P ++ GRA
Sbjct: 597 LSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGH 656
Query: 303 FGEGLQ-IHSIIVKAGFDCYD-FIQATIIHFYAACGRINLARLQ----FELGIKDHIASW 356
E I + +K + + + A IH G LA L FEL D S+
Sbjct: 657 LTEAKDLIDKMPMKPTAEVWGALLSACKIH-----GNDELAELAAKHVFELDSPDS-GSY 710
Query: 357 NALIAGFIRNGMIEDARQLFNNMQKRDV-----YSW 387
L + G +D+ Q+ M+ + + YSW
Sbjct: 711 MLLAKIYSDAGKSDDSAQVRKLMRDKGIKKNPGYSW 746
>gi|449438554|ref|XP_004137053.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g21090-like [Cucumis sativus]
Length = 611
Score = 318 bits (815), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 169/476 (35%), Positives = 271/476 (56%), Gaps = 3/476 (0%)
Query: 190 VIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPS 249
I++ +L+ MY C VEAR +FD+M RN+ SWN ML G+AK G V AR+LF+R+
Sbjct: 98 TIVANHLIGMYFECGRDVEARKVFDKMSVRNLYSWNHMLAGYAKLGDVNNARKLFDRMME 157
Query: 250 KDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQI 309
KDVVSW T++ Y + +EA+ +YR + N ++ C + Q+
Sbjct: 158 KDVVSWNTIVLAYAKQGCFNEAIGLYRDFRRLDMGFNAFSFAGVLILCVKLKELQLAKQV 217
Query: 310 HSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQF-ELGIKDHIASWNALIAGFIRNGM 368
H ++ AGF + ++I+ YA CG + AR F E+ +KD I +W +++G+ + G
Sbjct: 218 HGQVLVAGFLSNLVLSSSIVDAYAKCGEMRCARTLFDEMLVKD-IHAWTTIVSGYAKWGD 276
Query: 369 IEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCA 428
+ A +LF+ M +++ SWSA+ISGYA+N + AL+ F M+ G+ P + T S CA
Sbjct: 277 MNSASELFHQMPEKNPVSWSALISGYARNSLGHEALDYFTKMMKFGINPEQYTFSSCLCA 336
Query: 429 IASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVS 488
AS LK G+ H Y++ N + +++IDMY+KCG + + VF H+ V
Sbjct: 337 CASIAALKHGKQVHGYLIRTYFRCNTIVVSSLIDMYSKCGMLEASCCVF-HLMGNKQDVV 395
Query: 489 PWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSM 548
WN +I LA +G +++++D+ + +K + ITFI +LS C H+GLV G R+FK+M
Sbjct: 396 VWNTMISALAQNGHGEKAMQMFNDMVESGLKPDRITFIVILSACSHSGLVQEGLRFFKAM 455
Query: 549 KSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEV 608
+ V PD +HY C++DLLGRAG + + +M K D +W LL RIH N+E+
Sbjct: 456 TYDHGVFPDQEHYSCLIDLLGRAGCFVELVNELENMSCKPDDRVWSALLGVCRIHNNIEL 515
Query: 609 GERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
G + A+ + L+P + V L+++YA G+WE +R+ M + +++ G S +
Sbjct: 516 GRKVAERVIELKPQSSAAYVSLASLYAFLGKWESVEKVRELMDEKFIRKERGISWI 571
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 124/449 (27%), Positives = 228/449 (50%), Gaps = 40/449 (8%)
Query: 26 LVSALRYCSAHIAVSQGQQIHSLIFKSGLE-SNTFIQNSLINLYAKCGLISQAKSMFDSC 84
V LR C+ G+ +H + +G + T + N LI +Y +CG +A+ +FD
Sbjct: 65 FVDLLRLCAKAKYFKGGKCVHLHLKHTGFKRPTTIVANHLIGMYFECGRDVEARKVFDKM 124
Query: 85 STLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFR 144
S + + N M++GY + +N+AR++FD+ K VS+ ++++ +A+ C+ EA+ ++R
Sbjct: 125 SVRNLYSWNHMLAGYAKLGDVNNARKLFDRMMEKDVVSWNTIVLAYAKQGCFNEAIGLYR 184
Query: 145 DMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFV---IISTNLLNMYC 201
D R L + N + A V+ V L + + +HG ++++ GF+ ++S+++++ Y
Sbjct: 185 DFRRLDMGFNAFSFAGVLILCVKLKELQLAKQVHG---QVLVAGFLSNLVLSSSIVDAYA 241
Query: 202 VCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDG 261
C + AR+LFDEM ++I +W +++G+AK G + A ELF ++P K+ VSW +I G
Sbjct: 242 KCGEMRCARTLFDEMLVKDIHAWTTIVSGYAKWGDMNSASELFHQMPEKNPVSWSALISG 301
Query: 262 YLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCY 321
Y + EAL + M+ GI P + AC A G Q+H +++ F C
Sbjct: 302 YARNSLGHEALDYFTKMMKFGINPEQYTFSSCLCACASIAALKHGKQVHGYLIRTYFRCN 361
Query: 322 DFIQATIIHFYAACGRINLARLQFEL-GIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ 380
+ +++I Y+ CG + + F L G K + WN +I+ +NG E A Q+FN+
Sbjct: 362 TIVVSSLIDMYSKCGMLEASCCVFHLMGNKQDVVVWNTMISALAQNGHGEKAMQMFND-- 419
Query: 381 KRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG-R 439
MV++G+KP+ IT + + A + SG ++EG R
Sbjct: 420 -----------------------------MVESGLKPDRITFIVILSACSHSGLVQEGLR 450
Query: 440 WAHEYVLNNSITLNDNLSAAIIDMYAKCG 468
+ ++ + + + +ID+ + G
Sbjct: 451 FFKAMTYDHGVFPDQEHYSCLIDLLGRAG 479
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 105/406 (25%), Positives = 176/406 (43%), Gaps = 51/406 (12%)
Query: 267 RLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQA 326
RL EAL+ + G+ + VDL+ C +A F G +H + GF I A
Sbjct: 42 RLPEALSYLDRLAQRGVRLPTGIFVDLLRLCAKAKYFKGGKCVHLHLKHTGFKRPTTIVA 101
Query: 327 T-IIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVY 385
+I Y CGR AR F+ ++ SWN ++AG+ + G + +AR+LF+ M ++DV
Sbjct: 102 NHLIGMYFECGRDVEARKVFDKMSVRNLYSWNHMLAGYAKLGDVNNARKLFDRMMEKDVV 161
Query: 386 SWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYV 445
SW+ ++ YA+ N A+ L+ + N + V L+ + H V
Sbjct: 162 SWNTIVLAYAKQGCFNEAIGLYRDFRRLDMGFNAFSFAGVLILCVKLKELQLAKQVHGQV 221
Query: 446 LNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANL 505
L N LS++I+D YAKCG + A +F + + W I+ G A GD N
Sbjct: 222 LVAGFLSNLVLSSSIVDAYAKCGEMRCARTLFDEM--LVKDIHAWTTIVSGYAKWGDMNS 279
Query: 506 TLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPD-------- 557
+++ + ++ N +++ ++S L YF M + + P+
Sbjct: 280 ASELFHQMPEK----NPVSWSALISGYARNSLGHEALDYFTKMMK-FGINPEQYTFSSCL 334
Query: 558 --------LKH------------YGC-------MVDLLGRAGQLEDAEEVIRSMPMKADV 590
LKH + C ++D+ + G LE + V M K DV
Sbjct: 335 CACASIAALKHGKQVHGYLIRTYFRCNTIVVSSLIDMYSKCGMLEASCCVFHLMGNKQDV 394
Query: 591 VIWGTLLAASRIHGNVEVGERAAKSL-----AGLQPSHGPSRVLLS 631
V+W T+++A +G+ GE+A + +GL+P V+LS
Sbjct: 395 VVWNTMISALAQNGH---GEKAMQMFNDMVESGLKPDRITFIVILS 437
>gi|449525261|ref|XP_004169636.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Cucumis sativus]
Length = 650
Score = 318 bits (815), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 174/477 (36%), Positives = 273/477 (57%), Gaps = 24/477 (5%)
Query: 205 SLVEARSLFDEMKERNIVSWNVMLNGFAKAG--LVELAREL--------------FERIP 248
S++ +LF ++K+ V +++ NG ++ L +L R L F ++
Sbjct: 47 SILHDCTLFSQIKQ---VHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVN 103
Query: 249 SKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQ 308
+ W MI GY LSE+ Y M DG+ P L ACG A+ G Q
Sbjct: 104 YPNPFLWTAMIRGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQ 163
Query: 309 IHS-IIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNG 367
+H+ I+ GF ++ ++I Y CG + AR F+ + + SW LI + + G
Sbjct: 164 VHAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYG 223
Query: 368 MIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFC 427
+E A LF+++ +D+ +W+AM++GYAQN +P ALE F M D G++ +E+T+ V
Sbjct: 224 DMESASGLFDDLPSKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVIS 283
Query: 428 AIASSGTLKEGRWAHEYVLNNSITLNDNL--SAAIIDMYAKCGSINTAFEVFYHIRDRTT 485
A A G +K W + + + N+ +A+IDMY+KCGS + A++VF +++R
Sbjct: 284 ACAQLGAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKER-- 341
Query: 486 SVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYF 545
+V ++++I G AMHG A+ L+++ D+ K I+ N +TFIG+LS C HAGLV+ G + F
Sbjct: 342 NVFSYSSMILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLF 401
Query: 546 KSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGN 605
M+ + V P HY CMVDLLGRAG LE+A +++++MPM+ + +WG LL A RIHGN
Sbjct: 402 AKMEKFFGVAPSPDHYACMVDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHGN 461
Query: 606 VEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
++ + AA L L+P+ + +LLSNIYA AGRWE+ +RK +R+ G K+ PG S
Sbjct: 462 PDIAQIAANELFKLEPNGIGNYILLSNIYASAGRWEEVSKLRKVIREKGFKKNPGCS 518
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 117/498 (23%), Positives = 223/498 (44%), Gaps = 80/498 (16%)
Query: 18 QNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQA 77
Q E L+S L C+ SQ +Q+H+ I ++GL +++ LI + K +
Sbjct: 37 QRKLLEWRLMSILHDCTL---FSQIKQVHAHIIRNGLSQCSYVLTKLIRMLTKVDV---- 89
Query: 78 KSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWR 137
P+ ++ VF + +T+MI G+A
Sbjct: 90 -----------PMGSYPLL--------------VFGQVNYPNPFLWTAMIRGYALQGLLS 124
Query: 138 EALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGF---VIIST 194
E+ + MR GV P T +++ + + + +H I +I GF + +
Sbjct: 125 ESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTI--LIGGFASDLYVGN 182
Query: 195 NLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVS 254
+++++Y C L AR +FDEM ER++VSW ++ +AK G +E A LF+ +PSKD+V+
Sbjct: 183 SMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLPSKDMVA 242
Query: 255 WGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIV 314
W M+ GY Q R EAL ++ M G+ ++V + +ISAC + A I I
Sbjct: 243 WTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHANWIRDIAE 302
Query: 315 KAGFDCYD--FIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDA 372
++GF + + +I Y+ CG + A FE+ + ++ S++++I G+ +G A
Sbjct: 303 RSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMHGRAHSA 362
Query: 373 RQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASS 432
QLF++M K + ++PN++T + + A + +
Sbjct: 363 LQLFHDMLKTE-------------------------------IRPNKVTFIGILSACSHA 391
Query: 433 GTLKEGRWAHEYVLN-NSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSP-- 489
G +++GR + + + + A ++D+ + G + A ++ +T + P
Sbjct: 392 GLVEQGRQLFAKMEKFFGVAPSPDHYACMVDLLGRAGCLEEALDLV-----KTMPMEPNG 446
Query: 490 --WNAIICGLAMHGDANL 505
W A++ +HG+ ++
Sbjct: 447 GVWGALLGACRIHGNPDI 464
>gi|297734691|emb|CBI16742.3| unnamed protein product [Vitis vinifera]
Length = 674
Score = 318 bits (815), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 189/584 (32%), Positives = 315/584 (53%), Gaps = 28/584 (4%)
Query: 85 STLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFR 144
+ LD CNI IS R + AR++FD+ P VSYT+MI + +N+ R+A ++F+
Sbjct: 65 TVLDIYNCNIKISQLGRCGNVRGARKLFDEMPHHDNVSYTAMITAYLKNNELRKAEKLFQ 124
Query: 145 DMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGL--VIKLMIDGFVIISTNLLNMYCV 202
M P+ ++++ S + G + ++ V MID V T+L++ Y
Sbjct: 125 TM------PDR----TIVAESAMIDGYAKAGLMDSAQKVFDAMIDTNVFSWTSLISGYFR 174
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
+ +A LFD+M +N+VSW M+ G+A+ GL++ AR +F ++P K+ +SW M+ Y
Sbjct: 175 DGQVAKACQLFDQMPAKNVVSWTTMVLGYARNGLIDQARSVFNQMPEKNTISWTAMMKSY 234
Query: 263 LQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD 322
+ R EAL ++ M + + MI S C E ++ ++ +
Sbjct: 235 VDNGRTDEALKLFHEMPQRNLYSWNTMI----SGCLDGKRVNEAFKLFHLM-----PLRN 285
Query: 323 FIQATI-IHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQK 381
+ TI + A G LAR F+ IA+WNA+I ++ +I +A +LFN M +
Sbjct: 286 AVSWTIMVSGLARNGFTKLAREYFDQMPNKDIAAWNAMITAYVDECLIVEASELFNLMTE 345
Query: 382 RDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWA 441
R++ +W+AMI GYA++ A++ M+ + ++PNE TM + + S + E A
Sbjct: 346 RNIVTWNAMIDGYARHRPDGEAMKHLILMLRSCIRPNETTMTII---LTSCWGMLELMQA 402
Query: 442 HEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHG 501
H + +LS A+I MY++ G I+++ F ++ + V W A++ HG
Sbjct: 403 HALAIVVGCECETSLSNALITMYSRIGDISSSRIAFESLKAK--DVVSWTAMLLAFTYHG 460
Query: 502 DANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHY 561
+ L ++ + K K + ITF+GVLS C HAGLV G++ F SM Y +EP +HY
Sbjct: 461 HGDHALHVFGHMLKSGTKPDEITFVGVLSACSHAGLVKKGQKLFDSMSRAYGLEPRAEHY 520
Query: 562 GCMVDLLGRAGQLEDAEEVIRSMPM-KADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQ 620
C+VD+LGRAGQ+ +A +V+ MP + D + G LL A R+HGNVE+ + + L LQ
Sbjct: 521 SCLVDILGRAGQVHEAMDVVWKMPECERDGAVLGALLGACRLHGNVEMADYIGQKLIELQ 580
Query: 621 PSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
P+ VLL+N++A G W++ +RK+M+D ++++PGFS +
Sbjct: 581 PNSSGGYVLLANVFAARGNWDEFAEVRKKMKDRNVRKVPGFSQI 624
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 115/471 (24%), Positives = 220/471 (46%), Gaps = 69/471 (14%)
Query: 49 IFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDA 108
+F + +++N F SLI+ Y + G +++A +FD + V+ M+ GY RN ++ A
Sbjct: 153 VFDAMIDTNVFSWTSLISGYFRDGQVAKACQLFDQMPAKNVVSWTTMVLGYARNGLIDQA 212
Query: 109 REVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHL 168
R VF++ P K +S+T+M+ + N EAL++F +M N + ++IS +
Sbjct: 213 RSVFNQMPEKNTISWTAMMKSYVDNGRTDEALKLFHEM----PQRNLYSWNTMISGCLDG 268
Query: 169 GGIWEC-RMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVM 227
+ E ++ H + ++ + +++S N + AR FD+M ++I +WN M
Sbjct: 269 KRVNEAFKLFHLMPLRNAVSWTIMVSGLARNGFTKL-----AREYFDQMPNKDIAAWNAM 323
Query: 228 LNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPND 287
+ + L+ A ELF + +++V+W MIDGY + EA+ ML I PN+
Sbjct: 324 ITAYVDECLIVEASELFNLMTERNIVTWNAMIDGYARHRPDGEAMKHLILMLRSCIRPNE 383
Query: 288 VMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFE- 346
+ ++++C + E +Q H++ + G +C + +I Y+ G I+ +R+ FE
Sbjct: 384 TTMTIILTSCWGML---ELMQAHALAIVVGCECETSLSNALITMYSRIGDISSSRIAFES 440
Query: 347 LGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALEL 406
L KD + SW A++ F +G + AL +
Sbjct: 441 LKAKD-VVSWTAMLLAFTYHG-------------------------------HGDHALHV 468
Query: 407 FHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAA------- 459
F M+ +G KP+EIT V V A + +G +K+G+ L D++S A
Sbjct: 469 FGHMLKSGTKPDEITFVGVLSACSHAGLVKKGQ-----------KLFDSMSRAYGLEPRA 517
Query: 460 -----IIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANL 505
++D+ + G ++ A +V + + + + A++ +HG+ +
Sbjct: 518 EHYSCLVDILGRAGQVHEAMDVVWKMPECERDGAVLGALLGACRLHGNVEM 568
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 52/126 (41%), Gaps = 31/126 (24%)
Query: 44 QIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRND 103
Q H+L G E T + N+LI +Y++ G IS ++ F+S D
Sbjct: 401 QAHALAIVVGCECETSLSNALITMYSRIGDISSSRIAFESLKAKD--------------- 445
Query: 104 RLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVIS 163
VS+T+M++ F + AL VF M G P+E+T V+S
Sbjct: 446 ----------------VVSWTAMLLAFTYHGHGDHALHVFGHMLKSGTKPDEITFVGVLS 489
Query: 164 SSVHLG 169
+ H G
Sbjct: 490 ACSHAG 495
>gi|225438894|ref|XP_002279137.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Vitis vinifera]
Length = 628
Score = 318 bits (815), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 163/434 (37%), Positives = 248/434 (57%), Gaps = 6/434 (1%)
Query: 231 FAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMI 290
+A G ++ + LF R + V W +I G+ +AL Y ML G+ PN
Sbjct: 72 YASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTF 131
Query: 291 VDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIK 350
++ C G +HS VK GFD +++ ++ YA G + A+ F+ +
Sbjct: 132 SSILKLC----PIEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPE 187
Query: 351 DHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGM 410
+ S A++ + ++G ++ AR LF+ M++RD W+ MI GY QN PN AL LF M
Sbjct: 188 KSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRM 247
Query: 411 VDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSI 470
+ A KPNE+T++SV A G L+ GRW H Y+ NN I N ++ A++DMY+KCGS+
Sbjct: 248 LKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSL 307
Query: 471 NTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLS 530
A VF I D+ V WN++I G AMHG + L+++ + + + +ITFIG+LS
Sbjct: 308 EDARLVFDKIDDK--DVVAWNSMIVGYAMHGFSQEALQLFKSMCRMGLHPTNITFIGILS 365
Query: 531 TCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADV 590
C H+G V G F MK Y +EP ++HYGCMV+LLGRAG +E A E++++M ++ D
Sbjct: 366 ACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDP 425
Query: 591 VIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEM 650
V+WGTLL A R+HG + +GE+ + L ++ + +LLSNIYA G W+ +R M
Sbjct: 426 VLWGTLLGACRLHGKIALGEKIVELLVDQNLANSGTYILLSNIYAAVGNWDGVARLRTMM 485
Query: 651 RDCGMKRLPGFSGV 664
+D G+K+ PG S +
Sbjct: 486 KDSGVKKEPGCSSI 499
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 130/496 (26%), Positives = 216/496 (43%), Gaps = 81/496 (16%)
Query: 38 AVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMIS 97
+S QIH+++F+ GL+ + + L YA G
Sbjct: 42 TISHLLQIHAVLFRHGLDHHPILNFKLQRSYASLG------------------------- 76
Query: 98 GYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVT 157
RL+ + +F +T +T++I G A +AL + M GV PN T
Sbjct: 77 ------RLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFT 130
Query: 158 LASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMK 217
+S++ L I + LH +KL D + + T LL++Y +V A+ LFD M
Sbjct: 131 FSSILK----LCPIEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMP 186
Query: 218 ERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRA 277
E+++VS ML +AK G ++ AR LF+ + +D V W MIDGY Q +EAL ++R
Sbjct: 187 EKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRR 246
Query: 278 MLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGR 337
ML PN+V ++ ++SACG+ A G +HS I G + ++ Y+ CG
Sbjct: 247 MLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGS 306
Query: 338 INLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQN 397
+ ARL F+ + +WN++I G+ +G ++A QLF +M +
Sbjct: 307 LEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEALQLFKSMCR---------------- 350
Query: 398 EQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG-----RWAHEYVLNNSITL 452
G+ P IT + + A SG + EG + EY + I
Sbjct: 351 ---------------MGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKI-- 393
Query: 453 NDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSP--WNAIICGLAMHGDANLTLKIY 510
++++ + G + A+E+ +++ P W ++ +HG L KI
Sbjct: 394 --EHYGCMVNLLGRAGHVEQAYEL---VKNMNIEPDPVLWGTLLGACRLHGKIALGEKIV 448
Query: 511 SDLEKRNIKLNSITFI 526
L +N+ NS T+I
Sbjct: 449 ELLVDQNLA-NSGTYI 463
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 96/365 (26%), Positives = 170/365 (46%), Gaps = 66/365 (18%)
Query: 28 SALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTL 87
S L+ C + G+ +HS K G +S+ +++ L+++YA+ G + A+ +FD+
Sbjct: 133 SILKLC----PIEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPEK 188
Query: 88 DPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMR 147
V+ M++ Y ++ L+ AR +FD + V + MI G+ QN EAL +FR M
Sbjct: 189 SLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRML 248
Query: 148 ILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLV 207
PNEVT+ SV+S+ LG + R +H + I V + T L++MY C SL
Sbjct: 249 KAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLE 308
Query: 208 EARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVER 267
+AR +FD++ ++++V+WN M+ G+A G +
Sbjct: 309 DARLVFDKIDDKDVVAWNSMIVGYAMHGFSQ----------------------------- 339
Query: 268 LSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQAT 327
EAL ++++M G+ P ++ + ++SACG HS V G+D ++
Sbjct: 340 --EALQLFKSMCRMGLHPTNITFIGILSACG-----------HSGWVTEGWDIFN----- 381
Query: 328 IIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ-KRDVYS 386
+++ E GI+ I + ++ R G +E A +L NM + D
Sbjct: 382 --------------KMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVL 427
Query: 387 WSAMI 391
W ++
Sbjct: 428 WGTLL 432
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/347 (22%), Positives = 144/347 (41%), Gaps = 68/347 (19%)
Query: 307 LQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRN 366
LQIH+++ + G D + + + YA+ GR++ + +A F R
Sbjct: 47 LQIHAVLFRHGLDHHPILNFKLQRSYASLGRLDYS------------------VALFGRT 88
Query: 367 GMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVF 426
Q V+ W+A+I G+A AL + M+ GV+PN T F
Sbjct: 89 -------------QNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFT----F 131
Query: 427 CAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRT-T 485
+I ++ G+ H + + + ++D+YA+ G + +A ++F + +++
Sbjct: 132 SSILKLCPIEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPEKSLV 191
Query: 486 SVSP----------------------------WNAIICGLAMHGDANLTLKIYSDLEKRN 517
S++ WN +I G +G N L ++ + K
Sbjct: 192 SLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAK 251
Query: 518 IKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDA 577
K N +T + VLS C G ++ G R+ S ++ ++ +VD+ + G LEDA
Sbjct: 252 AKPNEVTVLSVLSACGQLGALESG-RWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDA 310
Query: 578 EEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLA--GLQPS 622
V + K DVV W +++ +HG + + KS+ GL P+
Sbjct: 311 RLVFDKIDDK-DVVAWNSMIVGYAMHGFSQEALQLFKSMCRMGLHPT 356
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 104/243 (42%), Gaps = 72/243 (29%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E+ ++S L C A+ G+ +HS I +G++ N + +L+++Y+KCG
Sbjct: 256 EVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCG---------- 305
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
L DAR VFDK K V++ SMI+G+A + +EAL++
Sbjct: 306 ---------------------SLEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEALQL 344
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
F+ M +G+ P +T ++S+ H G W
Sbjct: 345 FKSMCRMGLHPTNITFIGILSACGHSG--W------------------------------ 372
Query: 203 CSSLVEARSLFDEMK-----ERNIVSWNVMLNGFAKAGLVELARELFERIP-SKDVVSWG 256
+ E +F++MK E I + M+N +AG VE A EL + + D V WG
Sbjct: 373 ---VTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWG 429
Query: 257 TMI 259
T++
Sbjct: 430 TLL 432
>gi|32487551|emb|CAE03754.1| OSJNBa0013K16.3 [Oryza sativa Japonica Group]
Length = 865
Score = 318 bits (815), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 193/636 (30%), Positives = 323/636 (50%), Gaps = 38/636 (5%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
++ C A Q+ L +K + ++ +L++++ +CG + A +F
Sbjct: 145 MKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTI 204
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
N M++GY + ++ A E F+ + VS+ MI +Q+ REAL + +M
Sbjct: 205 FCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRK 264
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLM--IDGFVIISTNLLNMYCVCSSLV 207
GV + T S +++ L + + LH VI+ + ID +V ++ L+ +Y C S
Sbjct: 265 GVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYV--ASALIELYAKCGSFK 322
Query: 208 EARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVER 267
EA+ +F + ++ VSW +I G LQ E
Sbjct: 323 EAK-------------------------------RVFNSLQDRNSVSWTVLIGGSLQYEC 351
Query: 268 LSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQAT 327
S+++ ++ M + +A + + LIS C M G Q+HS+ +K+G + + +
Sbjct: 352 FSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNS 411
Query: 328 IIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSW 387
+I YA CG + A F + I SW ++I + + G I AR+ F+ M R+ +W
Sbjct: 412 LISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMATRNAITW 471
Query: 388 SAMISGYAQNEQPNMALELFHGMV-DAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVL 446
+AM+ Y Q+ L+++ M+ V P+ +T V++F A G K G + +
Sbjct: 472 NAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTV 531
Query: 447 NNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLT 506
+ LN +++ A I MY+KCG I+ A ++F + + V WNA+I G + HG
Sbjct: 532 KAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGK--DVVSWNAMITGYSQHGMGKQA 589
Query: 507 LKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVD 566
K + D+ + K + I+++ VLS C H+GLV G+ YF M V+ + P L+H+ CMVD
Sbjct: 590 AKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVD 649
Query: 567 LLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPS 626
LLGRAG L +A+++I MPMK +WG LL+A +IHGN E+ E AAK + L S
Sbjct: 650 LLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSACKIHGNDELAELAAKHVFELDSPDSGS 709
Query: 627 RVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
+LL+ IY+DAG+ +D+ +RK MRD G+K+ PG+S
Sbjct: 710 YMLLAKIYSDAGKSDDSAQVRKLMRDKGIKKNPGYS 745
Score = 208 bits (530), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 159/627 (25%), Positives = 285/627 (45%), Gaps = 74/627 (11%)
Query: 25 ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS- 83
AL ALR C + A++ + +H + GL S F+QN+L++ Y CG +S A+ + +
Sbjct: 6 ALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRAD 65
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
+ + NIM++GY + L+DA E+FD+ P + S+ +++ G+ Q + + LE F
Sbjct: 66 IKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSGYFQARRFLDGLETF 125
Query: 144 RDMRILG-VIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
M G +PN T V+ S LG L GL K G + T L++M+
Sbjct: 126 VSMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVR 185
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
C + A LF +++ I N ML G+AK ++ A E FE + +DVVSW MI
Sbjct: 186 CGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAAL 245
Query: 263 LQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD 322
Q R+ EAL + M G+ + ++AC R + G G Q+H+ ++++
Sbjct: 246 SQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDP 305
Query: 323 FIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKR 382
++ + +I YA CG ++A+++FN++Q R
Sbjct: 306 YVASALIELYAKCGS-------------------------------FKEAKRVFNSLQDR 334
Query: 383 DVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAH 442
+ SW+ +I G Q E + ++ELF+ M + ++ + ++ + L GR H
Sbjct: 335 NSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLH 394
Query: 443 EYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDR------------------- 483
L + +S ++I +YAKCG + A VF + +R
Sbjct: 395 SLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNII 454
Query: 484 ----------TTSVSPWNAIICGLAMHGDANLTLKIYSD-LEKRNIKLNSITFIGVLSTC 532
T + WNA++ HG LK+YS L ++++ + +T++ + C
Sbjct: 455 KAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGC 514
Query: 533 CHAGLVDLGERYF-KSMKS--VYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKAD 589
G LG++ ++K+ + NV + + + G++ +A+++ + K D
Sbjct: 515 ADIGANKLGDQIIGHTVKAGLILNVSV----ANAAITMYSKCGRISEAQKLFDLLNGK-D 569
Query: 590 VVIWGTLLAASRIHGNVEVGERAAKSL 616
VV W ++ HG +G++AAK+
Sbjct: 570 VVSWNAMITGYSQHG---MGKQAAKTF 593
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 105/396 (26%), Positives = 182/396 (45%), Gaps = 24/396 (6%)
Query: 9 VFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLY 68
+FN +A L D + AL + + C + + G+Q+HSL KSG + NSLI+LY
Sbjct: 358 LFNQMRAELMAID-QFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLY 416
Query: 69 AKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIM 128
AKCG + A+ +F S S D V+ MI+ Y + + ARE FD + +++ +M+
Sbjct: 417 AKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMATRNAITWNAMLG 476
Query: 129 GFAQNDCWREALEVFRDM-RILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMID 187
+ Q+ + L+++ M V P+ VT ++ +G + G +K +
Sbjct: 477 AYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLI 536
Query: 188 GFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERI 247
V ++ + MY C + EA+ LFD + +++VSWN M+ G+++ G+ + A + F+ +
Sbjct: 537 LNVSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDM 596
Query: 248 PSK----DVVSWGTMIDGYLQVERLSEALTMYRAML-CDGIAPNDVMIVDLISACGRAMA 302
SK D +S+ ++ G + E + M GI+P ++ GRA
Sbjct: 597 LSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGH 656
Query: 303 FGEGLQ-IHSIIVKAGFDCYD-FIQATIIHFYAACGRINLARLQ----FELGIKDHIASW 356
E I + +K + + + A IH G LA L FEL D S+
Sbjct: 657 LTEAKDLIDKMPMKPTAEVWGALLSACKIH-----GNDELAELAAKHVFELDSPDS-GSY 710
Query: 357 NALIAGFIRNGMIEDARQLFNNMQKRDV-----YSW 387
L + G +D+ Q+ M+ + + YSW
Sbjct: 711 MLLAKIYSDAGKSDDSAQVRKLMRDKGIKKNPGYSW 746
>gi|224080303|ref|XP_002306089.1| predicted protein [Populus trichocarpa]
gi|222849053|gb|EEE86600.1| predicted protein [Populus trichocarpa]
Length = 677
Score = 318 bits (815), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 197/640 (30%), Positives = 339/640 (52%), Gaps = 19/640 (2%)
Query: 38 AVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMIS 97
++ G H KSG N L++LY+K LI++A+ +FD + + N +IS
Sbjct: 3 SLKDGLMRHVRSIKSGFTLPILTSNQLVHLYSKHCLINEAQKLFDEMPQRNTYSWNTIIS 62
Query: 98 GYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCW-REALEVFRDMRIL--GVIPN 154
+I++ L A+ +FD ++ V+Y SM+ G+ D + R ALE+F +M+ + + +
Sbjct: 63 AHIKSQNLAQAKSIFDSASVRDLVTYNSMLSGYVSVDGYERNALELFVEMQSIRNEIEID 122
Query: 155 EVTLASVISSSVHLGGIWECRMLHGLVIKLMID--GFVIISTNLLNMYCVCSSLVEARSL 212
++T+ S+++ L R LH ++K D GFV+ ++L++MY C EA +
Sbjct: 123 DLTITSMVNLFSKLCNSCYGRQLHSYMVKTGNDRSGFVV--SSLIDMYSKCGCFKEACQV 180
Query: 213 FDEMKER---NIVSWNVMLNGFAKAGLVELARELFERIPS-KDVVSWGTMIDGYLQVERL 268
F + ++VS N M+ + + G +E+A LF R D VSW T+I GY+Q
Sbjct: 181 FKGCEREGGFDLVSKNAMVAAYCREGDMEMALRLFWRESELNDSVSWNTLISGYVQNGYP 240
Query: 269 SEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATI 328
EAL ++ M +G+ N+ ++SAC G ++H+ I+K G F+++ I
Sbjct: 241 VEALKLFVCMGENGVKWNEHTFGSVLSACADLRNLKIGKEMHAWILKNGLGSSAFVESGI 300
Query: 329 IHFYAACGRINLAR-LQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSW 387
+ Y CG + A L G++ S ++I GF G + +A +LF+++++++ W
Sbjct: 301 VDVYCKCGNMKYAESLLLTRGVRSSF-SITSMIVGFSSQGNMVEACRLFDSLEEKNSIVW 359
Query: 388 SAMISGYAQNEQPNMALELFHGMV--DAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYV 445
+A+ SGY + +Q EL + +A + P+ + ++S F A L G+ H YV
Sbjct: 360 AALFSGYVKLKQCEAFFELLREYIAKEAAI-PDALILISAFNVCAFQAALGPGKQIHGYV 418
Query: 446 LNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANL 505
I ++ + A+IDMY+KCGSI A ++F + +R + +N ++ G A HG
Sbjct: 419 FRMGIEMDMKTTTAMIDMYSKCGSIPYAEKLFLKVIERDLVL--YNVMLAGYAHHGHEIK 476
Query: 506 TLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMV 565
+ ++ ++ +R + +++TF+ +LS C H GLVDLGE+ F SM Y++ P+ HY CM+
Sbjct: 477 AINLFQEMLERGVGPDAVTFVALLSACRHRGLVDLGEKTFYSMTEDYHILPETDHYACMI 536
Query: 566 DLLGRAGQLEDAEEVIRSMPMK-ADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHG 624
DL GRA QLE ++ +PM+ D + G A R++ N E+ + A + L ++ G
Sbjct: 537 DLYGRASQLEKMVLFMQRIPMEHQDAAVVGAFFNACRLNNNTELAKEAEEKLLNIEGDSG 596
Query: 625 PSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
V L+N+YA G W + IR+EMR K+ G S V
Sbjct: 597 ARYVQLANVYAAEGNWAEMGRIRREMRGKEAKKFAGCSWV 636
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 128/271 (47%), Gaps = 32/271 (11%)
Query: 28 SALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTL 87
S L C+ + G+++H+ I K+GL S+ F+++ ++++Y KCG + A+S+ +
Sbjct: 264 SVLSACADLRNLKIGKEMHAWILKNGLGSSAFVESGIVDVYCKCGNMKYAESLLLTRGVR 323
Query: 88 DPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRD-M 146
+ MI G+ + +A +FD K + + ++ G+ + E+ R+ +
Sbjct: 324 SSFSITSMIVGFSSQGNMVEACRLFDSLEEKNSIVWAALFSGYVKLKQCEAFFELLREYI 383
Query: 147 RILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSL 206
IP+ + L S + + + +HG V ++ I+ + +T +++MY C S+
Sbjct: 384 AKEAAIPDALILISAFNVCAFQAALGPGKQIHGYVFRMGIEMDMKTTTAMIDMYSKCGSI 443
Query: 207 VEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVE 266
A LF ++ ER++V +NVML G+A G E+
Sbjct: 444 PYAEKLFLKVIERDLVLYNVMLAGYAHHG-----HEI----------------------- 475
Query: 267 RLSEALTMYRAMLCDGIAPNDVMIVDLISAC 297
+A+ +++ ML G+ P+ V V L+SAC
Sbjct: 476 ---KAINLFQEMLERGVGPDAVTFVALLSAC 503
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 69/146 (47%), Gaps = 31/146 (21%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
L L+SA C+ A+ G+QIH +F+ G+E + ++I++Y+KCG I A+ +F
Sbjct: 393 LILISAFNVCAFQAALGPGKQIHGYVFRMGIEMDMKTTTAMIDMYSKCGSIPYAEKLFLK 452
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
D V N+M++GY + E+ +A+ +F
Sbjct: 453 VIERDLVLYNVMLAGYAHH-----GHEI--------------------------KAINLF 481
Query: 144 RDMRILGVIPNEVTLASVISSSVHLG 169
++M GV P+ VT +++S+ H G
Sbjct: 482 QEMLERGVGPDAVTFVALLSACRHRG 507
>gi|449436591|ref|XP_004136076.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Cucumis sativus]
Length = 878
Score = 318 bits (815), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 196/637 (30%), Positives = 314/637 (49%), Gaps = 97/637 (15%)
Query: 28 SALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTL 87
S L+ C+ +++G++IH+ + + G ES+ + N+LI +Y KCG IS
Sbjct: 203 SVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDIS------------ 250
Query: 88 DPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMR 147
+AR +FDK P + +S+ +MI G+ +N E LE+F MR
Sbjct: 251 -------------------NARMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMR 291
Query: 148 ILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLV 207
L V P+ +T+ +V S+ L R +HG V+K G + ++ +L+ MY L
Sbjct: 292 ELSVDPDLITMTTVASACELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLE 351
Query: 208 EARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVER 267
EA ++F M+ +++VSW M+ A LV ++P K
Sbjct: 352 EAETVFSRMESKDVVSWTAMI-----ASLVS------HKLPFK----------------- 383
Query: 268 LSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQAT 327
A+ Y+ M +GI P+++ +V ++SAC G+++H I +K G + + +
Sbjct: 384 ---AVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVSHVIVSNS 440
Query: 328 IIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSW 387
+I Y+ C +++A ++F N+ ++V SW
Sbjct: 441 LIDMYSKC-------------------------------KCVDNALEVFRNISGKNVVSW 469
Query: 388 SAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLN 447
+++I G N + AL F M ++ +KPN +T++SV A A G L G+ H + L
Sbjct: 470 TSLILGLRINNRSFEALLFFRQMKES-MKPNSVTLISVLSACARIGALMRGKEIHAHALR 528
Query: 448 NSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTL 507
+ + L AI+DMY +CG A F + V+ WN ++ G A G A L +
Sbjct: 529 TGVGFDGFLPNAILDMYVRCGRKVPALNQF---NSQKKDVTAWNILLTGYAQQGQAKLAV 585
Query: 508 KIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDL 567
+++ + + I + ITFI +L C +G+V G YF MK+ YN+ P+LKHY C+VD+
Sbjct: 586 ELFDKMLELEIHPDEITFISLLCACSKSGMVTEGLEYFNIMKNKYNLTPNLKHYACVVDI 645
Query: 568 LGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSR 627
LGRAGQL+DA + I+ MP++ D IWG LL A RIH NVE+GE AAK +
Sbjct: 646 LGRAGQLDDAYDFIQDMPIRPDAAIWGALLNACRIHRNVELGEIAAKRVFEKDNKSVGYY 705
Query: 628 VLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
+LL N+YA G W+ +R MR+ G+ PG S V
Sbjct: 706 ILLCNLYAGCGNWDKVSKVRSLMRERGLSADPGCSWV 742
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 122/445 (27%), Positives = 205/445 (46%), Gaps = 47/445 (10%)
Query: 225 NVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIA 284
N +L+ F + G + A +F ++ +DV SW ++ GY + EAL +Y ML I
Sbjct: 136 NALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIR 195
Query: 285 PNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQ 344
PN ++ C G +IH+ +++ GF+
Sbjct: 196 PNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFES-----------------------D 232
Query: 345 FELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMAL 404
++G NALI +++ G I +AR LF+ M KRD SW+AMISGY +N L
Sbjct: 233 VDVG--------NALITMYVKCGDISNARMLFDKMPKRDRISWNAMISGYFENGGGLEGL 284
Query: 405 ELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMY 464
ELF M + V P+ ITM +V A + GR H YV+ + + +++ ++I MY
Sbjct: 285 ELFSMMRELSVDPDLITMTTVASACELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMY 344
Query: 465 AKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSIT 524
+ G + A VF R + V W A+I L H ++ Y +E I + IT
Sbjct: 345 SSLGRLEEAETVFS--RMESKDVVSWTAMIASLVSHKLPFKAVETYKMMELEGILPDEIT 402
Query: 525 FIGVLSTCCHAGLVDLGERYFK-SMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRS 583
+ VLS C G +DLG R + ++K+ + + ++D+ + +++A EV R+
Sbjct: 403 LVSVLSACACIGHLDLGIRLHEIAIKT--GLVSHVIVSNSLIDMYSKCKCVDNALEVFRN 460
Query: 584 MPMKADVVIWGTLLAASRIHGNVEVGERAAKSL---AGLQPSHGPSRVLLSNIYADAGRW 640
+ K +VV W +L+ RI+ R+ ++L ++ S P+ V L ++ + R
Sbjct: 461 ISGK-NVVSWTSLILGLRIN------NRSFEALLFFRQMKESMKPNSVTLISVLSACARI 513
Query: 641 EDAFSIRKEMRDCGMKRLPGFSGVV 665
A KE+ ++ GF G +
Sbjct: 514 -GALMRGKEIHAHALRTGVGFDGFL 537
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 151/336 (44%), Gaps = 90/336 (26%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E+ LVS L C+ + G ++H + K+GL S+ + NSLI++Y+KC +
Sbjct: 400 EITLVSVLSACACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLIDMYSKCKCV-------- 451
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
++A EVF K VS+TS+I+G N+ EAL
Sbjct: 452 -----------------------DNALEVFRNISGKNVVSWTSLILGLRINNRSFEALLF 488
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMI--DGFVIISTNLLNMY 200
FR M+ + PN VTL SV+S+ +G + + +H ++ + DGF + +L+MY
Sbjct: 489 FRQMK-ESMKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGF--LPNAILDMY 545
Query: 201 CVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMID 260
C V A + F+ K +++ +WN++L G+A+ G +LA ELF+++
Sbjct: 546 VRCGRKVPALNQFNSQK-KDVTAWNILLTGYAQQGQAKLAVELFDKM------------- 591
Query: 261 GYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQ------------ 308
L++E I P+++ + L+ AC ++ EGL+
Sbjct: 592 --LELE----------------IHPDEITFISLLCACSKSGMVTEGLEYFNIMKNKYNLT 633
Query: 309 --------IHSIIVKAGF--DCYDFIQATIIHFYAA 334
+ I+ +AG D YDFIQ I AA
Sbjct: 634 PNLKHYACVVDILGRAGQLDDAYDFIQDMPIRPDAA 669
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 83/164 (50%), Gaps = 16/164 (9%)
Query: 6 FHSVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLI 65
F + S K N + L+S L C+ A+ +G++IH+ ++G+ + F+ N+++
Sbjct: 489 FRQMKESMKPN------SVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNAIL 542
Query: 66 NLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKT------PIKC 119
++Y +CG A + F+S D A NI+++GY + + A E+FDK P +
Sbjct: 543 DMYVRCGRKVPALNQFNS-QKKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDE- 600
Query: 120 CVSYTSMIMGFAQNDCWREALEVFRDMR-ILGVIPNEVTLASVI 162
+++ S++ +++ E LE F M+ + PN A V+
Sbjct: 601 -ITFISLLCACSKSGMVTEGLEYFNIMKNKYNLTPNLKHYACVV 643
>gi|449491114|ref|XP_004158804.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g15510, chloroplastic-like [Cucumis sativus]
Length = 878
Score = 318 bits (814), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 196/637 (30%), Positives = 314/637 (49%), Gaps = 97/637 (15%)
Query: 28 SALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTL 87
S L+ C+ +++G++IH+ + + G ES+ + N+LI +Y KCG IS
Sbjct: 203 SVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDIS------------ 250
Query: 88 DPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMR 147
+AR +FDK P + +S+ +MI G+ +N E LE+F MR
Sbjct: 251 -------------------NARMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMR 291
Query: 148 ILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLV 207
L V P+ +T+ +V S+ L R +HG V+K G + ++ +L+ MY L
Sbjct: 292 ELSVDPDLITMTTVASACELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLE 351
Query: 208 EARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVER 267
EA ++F M+ +++VSW M+ A LV ++P K
Sbjct: 352 EAETVFSRMESKDVVSWTAMI-----ASLVS------HKLPFK----------------- 383
Query: 268 LSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQAT 327
A+ Y+ M +GI P+++ +V ++SAC G+++H I +K G + + +
Sbjct: 384 ---AVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVSHVIVSNS 440
Query: 328 IIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSW 387
+I Y+ C +++A ++F N+ ++V SW
Sbjct: 441 LIDMYSKC-------------------------------KCVDNALEVFRNISGKNVVSW 469
Query: 388 SAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLN 447
+++I G N + AL F M ++ +KPN +T++SV A A G L G+ H + L
Sbjct: 470 TSLILGLRINNRSFEALLFFRQMKES-MKPNSVTLISVLSACARIGALMRGKEIHAHALR 528
Query: 448 NSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTL 507
+ + L AI+DMY +CG A F + V+ WN ++ G A G A L +
Sbjct: 529 TGVGFDGFLPNAILDMYVRCGRKVPALNQF---NSQKKDVTAWNILLTGYAQQGQAKLAV 585
Query: 508 KIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDL 567
+++ + + I + ITFI +L C +G+V G YF MK+ YN+ P+LKHY C+VD+
Sbjct: 586 ELFDKMLELEIHPDEITFISLLCACSKSGMVTEGLEYFNIMKNKYNLTPNLKHYACVVDI 645
Query: 568 LGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSR 627
LGRAGQL+DA + I+ MP++ D IWG LL A RIH NVE+GE AAK +
Sbjct: 646 LGRAGQLDDAYDFIQDMPIRPDAAIWGALLNACRIHRNVELGEIAAKRVFEKDNKSVGYY 705
Query: 628 VLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
+LL N+YA G W+ +R MR+ G+ PG S V
Sbjct: 706 ILLCNLYAGCGNWDKVSKVRSLMRERGLSADPGCSWV 742
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 122/445 (27%), Positives = 205/445 (46%), Gaps = 47/445 (10%)
Query: 225 NVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIA 284
N +L+ F + G + A +F ++ +DV SW ++ GY + EAL +Y ML I
Sbjct: 136 NALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIR 195
Query: 285 PNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQ 344
PN ++ C G +IH+ +++ GF+
Sbjct: 196 PNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFES-----------------------D 232
Query: 345 FELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMAL 404
++G NALI +++ G I +AR LF+ M KRD SW+AMISGY +N L
Sbjct: 233 VDVG--------NALITMYVKCGDISNARMLFDKMPKRDRISWNAMISGYFENGGGLEGL 284
Query: 405 ELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMY 464
ELF M + V P+ ITM +V A + GR H YV+ + + +++ ++I MY
Sbjct: 285 ELFSMMRELSVDPDLITMTTVASACELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMY 344
Query: 465 AKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSIT 524
+ G + A VF R + V W A+I L H ++ Y +E I + IT
Sbjct: 345 SSLGRLEEAETVFS--RMESKDVVSWTAMIASLVSHKLPFKAVETYKMMELEGILPDEIT 402
Query: 525 FIGVLSTCCHAGLVDLGERYFK-SMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRS 583
+ VLS C G +DLG R + ++K+ + + ++D+ + +++A EV R+
Sbjct: 403 LVSVLSACACIGHLDLGIRLHEIAIKT--GLVSHVIVSNSLIDMYSKCKCVDNALEVFRN 460
Query: 584 MPMKADVVIWGTLLAASRIHGNVEVGERAAKSL---AGLQPSHGPSRVLLSNIYADAGRW 640
+ K +VV W +L+ RI+ R+ ++L ++ S P+ V L ++ + R
Sbjct: 461 ISGK-NVVSWTSLILGLRIN------NRSFEALLFFRQMKESMKPNSVTLISVLSACARI 513
Query: 641 EDAFSIRKEMRDCGMKRLPGFSGVV 665
A KE+ ++ GF G +
Sbjct: 514 -GALMRGKEIHAHALRTGVGFDGFL 537
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 151/336 (44%), Gaps = 90/336 (26%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E+ LVS L C+ + G ++H + K+GL S+ + NSLI++Y+KC +
Sbjct: 400 EITLVSVLSACACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLIDMYSKCKCV-------- 451
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
++A EVF K VS+TS+I+G N+ EAL
Sbjct: 452 -----------------------DNALEVFRNISGKNVVSWTSLILGLRINNRSFEALLF 488
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMI--DGFVIISTNLLNMY 200
FR M+ + PN VTL SV+S+ +G + + +H ++ + DGF + +L+MY
Sbjct: 489 FRQMK-ESMKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGF--LPNAILDMY 545
Query: 201 CVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMID 260
C V A + F+ K +++ +WN++L G+A+ G +LA ELF+++
Sbjct: 546 VRCGRKVPALNQFNSQK-KDVTAWNILLTGYAQQGQAKLAVELFDKM------------- 591
Query: 261 GYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQ------------ 308
L++E I P+++ + L+ AC ++ EGL+
Sbjct: 592 --LELE----------------IHPDEITFISLLCACSKSGMVTEGLEYFNIMKNKYNLT 633
Query: 309 --------IHSIIVKAGF--DCYDFIQATIIHFYAA 334
+ I+ +AG D YDFIQ I AA
Sbjct: 634 PNLKHYACVVDILGRAGQLDDAYDFIQDMPIRPDAA 669
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 83/164 (50%), Gaps = 16/164 (9%)
Query: 6 FHSVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLI 65
F + S K N + L+S L C+ A+ +G++IH+ ++G+ + F+ N+++
Sbjct: 489 FRQMKESMKPN------SVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNAIL 542
Query: 66 NLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKT------PIKC 119
++Y +CG A + F+S D A NI+++GY + + A E+FDK P +
Sbjct: 543 DMYVRCGRKVPALNQFNS-QKKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDE- 600
Query: 120 CVSYTSMIMGFAQNDCWREALEVFRDMR-ILGVIPNEVTLASVI 162
+++ S++ +++ E LE F M+ + PN A V+
Sbjct: 601 -ITFISLLCACSKSGMVTEGLEYFNIMKNKYNLTPNLKHYACVV 643
>gi|359497772|ref|XP_003635637.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 629
Score = 318 bits (814), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 184/556 (33%), Positives = 295/556 (53%), Gaps = 62/556 (11%)
Query: 108 AREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVH 167
A +VFDK P + V++T MI FAQ C R+A+++F DM + G +P+ T +SV+S+
Sbjct: 4 AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 63
Query: 168 LGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVM 227
LG + + LH VI+L + V + +L++MY C
Sbjct: 64 LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKC------------------------ 99
Query: 228 LNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQV-ERLSEALTMYRAMLCDGIAPN 286
A G V+ +R++FE++P +V+SW +I Y Q E EA+ ++ M+ I PN
Sbjct: 100 ----AADGSVDDSRKVFEQMPEHNVMSWTAIITAYAQSGECDKEAIELFCKMISGHIRPN 155
Query: 287 DVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFE 346
++ ACG G Q++S VK
Sbjct: 156 HFSFSSVLKACGNLSDPYTGEQVYSYAVK------------------------------- 184
Query: 347 LGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALEL 406
LGI N+LI+ + R+G +EDAR+ F+ + ++++ S++A++ GYA+N + A L
Sbjct: 185 LGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLL 244
Query: 407 FHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAK 466
F+ + D G+ + T S+ AS G + +G H +L N + A+I MY++
Sbjct: 245 FNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSR 304
Query: 467 CGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFI 526
CG+I AF+VF + DR +V W ++I G A HG A L+++ + + K N IT++
Sbjct: 305 CGNIEAAFQVFNEMEDR--NVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYV 362
Query: 527 GVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPM 586
VLS C H G++ G+++F SM + + P ++HY CMVDLLGR+G L +A E I SMP+
Sbjct: 363 AVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPL 422
Query: 587 KADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSI 646
AD ++W TLL A R+HGN E+G AA+ + +P + +LLSN++A AG+W+D I
Sbjct: 423 MADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKI 482
Query: 647 RKEMRDCGMKRLPGFS 662
RK M++ + + G S
Sbjct: 483 RKSMKERNLIKEAGCS 498
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 115/480 (23%), Positives = 201/480 (41%), Gaps = 93/480 (19%)
Query: 28 SALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTL 87
S L C+ ++ G+Q+HS + + GL + + SL+++YAKC
Sbjct: 56 SVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAA-------------- 101
Query: 88 DPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQN-DCWREALEVFRDM 146
+ ++D+R+VF++ P +S+T++I +AQ+ +C +EA+E+F M
Sbjct: 102 --------------DGSVDDSRKVFEQMPEHNVMSWTAIITAYAQSGECDKEAIELFCKM 147
Query: 147 RILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSL 206
+ PN + +SV+ + +L + ++ +KL I + +L++MY +
Sbjct: 148 ISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRM 207
Query: 207 VEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVE 266
+AR FD + E+N+VS+N +++G+AK E A LF I
Sbjct: 208 EDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADT---------------- 251
Query: 267 RLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQA 326
GI + L+S A G+G QIH ++K G+ I
Sbjct: 252 ---------------GIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICN 296
Query: 327 TIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYS 386
+I Y+ CG I A F ++ SW ++I GF ++G
Sbjct: 297 ALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGF------------------ 338
Query: 387 WSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG-RWAHEYV 445
ALE+FH M++ G KPNEIT V+V A + G + EG + +
Sbjct: 339 -------------ATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMY 385
Query: 446 LNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANL 505
+ I A ++D+ + G + A E F + W ++ +HG+ L
Sbjct: 386 KEHGIVPRMEHYACMVDLLGRSGLLVEAME-FINSMPLMADALVWRTLLGACRVHGNTEL 444
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 118/283 (41%), Gaps = 62/283 (21%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+ S L+ C G+Q++S K G+ S + NSLI++YA+ G + A+ FD
Sbjct: 157 FSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDI 216
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
+ V+ N ++ GY +N + EA +F
Sbjct: 217 LFEKNLVSYNAIVDGYAKNLKS-------------------------------EEAFLLF 245
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
++ G+ + T AS++S + +G + + +HG ++K I L++MY C
Sbjct: 246 NEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRC 305
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYL 263
++ A +F+EM++RN++SW M+ GFAK G
Sbjct: 306 GNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFA-------------------------- 339
Query: 264 QVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEG 306
+ AL M+ ML G PN++ V ++SAC EG
Sbjct: 340 -----TRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEG 377
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 96/222 (43%), Gaps = 45/222 (20%)
Query: 38 AVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMIS 97
A+ +G+QIH + K G +SN I CN +IS
Sbjct: 272 AMGKGEQIHGRLLKGGYKSNQCI-------------------------------CNALIS 300
Query: 98 GYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVT 157
Y R + A +VF++ + +S+TSMI GFA++ ALE+F M G PNE+T
Sbjct: 301 MYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEIT 360
Query: 158 LASVISSSVHLGGIWECRML-------HGLVIKLMIDGFVIISTNLLNMYCVCSSLVEAR 210
+V+S+ H+G I E + HG+V ++ + + ++++ LVEA
Sbjct: 361 YVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRM--EHYAC----MVDLLGRSGLLVEAM 414
Query: 211 SLFDEMK-ERNIVSWNVMLNGFAKAGLVELARELFERIPSKD 251
+ M + + W +L G EL R E I ++
Sbjct: 415 EFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQE 456
>gi|325260825|gb|ADZ04643.1| hypothetical protein [Oryza punctata]
Length = 674
Score = 318 bits (814), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 194/632 (30%), Positives = 318/632 (50%), Gaps = 40/632 (6%)
Query: 62 NSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCV 121
N+L+ Y + G + A+ +FD + D ++ +++ Y L AR VFD P +
Sbjct: 42 NALLTAYGRRGRLRDAQLLFDQMPSRDVISWTALLTAYADGGDLASARLVFDDMPRRNAP 101
Query: 122 SYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLV 181
S+ +++ + + R A +F M N V+ ++IS G + E +++ +
Sbjct: 102 SWNALLSVYLRAARPRAAHALFYKMPA----KNAVSYGAIISGLAKAGMLREAELVYEEM 157
Query: 182 IKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELAR 241
+ D + S L+ Y L A +F+ M R+++SW+ M++G K G V AR
Sbjct: 158 PQQWRDP--VGSNALMAGYLRVGELAMALRVFEGMTVRDVISWSAMVDGLCKHGSVSEAR 215
Query: 242 ELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAM 301
+F+ +P + VVSW +MI GY++ S+ L ++ M +G+ N + ++ AC A
Sbjct: 216 RVFDAMPERSVVSWTSMIRGYVKRGMCSDGLLLFLNMRREGVQVNATTLSVVLDACAGAS 275
Query: 302 AFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIA 361
EG+QIH++I+ GF+ F+ ++I Y+ G + A+ F + I SWN+LI
Sbjct: 276 LAREGIQIHNLIISMGFELDIFLGDSVIIMYSRFGWMADAQRAFNCMQQKDIVSWNSLIT 335
Query: 362 GFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMV---------- 411
G++++ M+E+A LF M ++D SW++M+ G+A ++ELF M
Sbjct: 336 GYVQHDMVEEAHVLFKLMPQKDAVSWTSMVVGFANRGWMRESVELFEQMPVKDVVAWTAI 395
Query: 412 ---------------------DAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSI 450
G KPN IT + A+AS L +GR AH Y +N
Sbjct: 396 ISSFITNGDYLSAVRWFCRMSQEGCKPNTITFSCLLSALASLAMLNQGRQAHAYSINMGW 455
Query: 451 TLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIY 510
+ + ++I MYAKCG + A VF I + S+ N++I HG A LK++
Sbjct: 456 VFDSAVHTSLISMYAKCGRLAEAHHVFSSISN--PSLIAINSMITAFVQHGFAEDALKLF 513
Query: 511 SDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGR 570
+ ++ K N +TF+G+L+ C AG V G YF+SM+ VY VEP+ +HY CMVDLLGR
Sbjct: 514 TKMQNAGYKPNHVTFLGILTGCARAGFVQQGYNYFESMRPVYGVEPNPEHYTCMVDLLGR 573
Query: 571 AGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLL 630
AG L +A E+I SMP W LL+AS +H N+ + AA+ L P + +L
Sbjct: 574 AGLLAEALEMINSMPQNDHSDAWAALLSASSLHSNLAFAKIAAQKLLEKDPYDATAYTVL 633
Query: 631 SNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
S +++ AG + ++ + KR PG+S
Sbjct: 634 SKMFSSAGMEYEEMQKVVQLSNMASKR-PGYS 664
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 99/440 (22%), Positives = 206/440 (46%), Gaps = 59/440 (13%)
Query: 10 FNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYA 69
N ++ +Q + L++V L C+ +G QIH+LI G E + F+ +S+I +Y+
Sbjct: 250 LNMRREGVQVNATTLSVV--LDACAGASLAREGIQIHNLIISMGFELDIFLGDSVIIMYS 307
Query: 70 KCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMG 129
+ G ++ A+ F+ D V+ N +I+GY+++D + +A +F P K VS+TSM++G
Sbjct: 308 RFGWMADAQRAFNCMQQKDIVSWNSLITGYVQHDMVEEAHVLFKLMPQKDAVSWTSMVVG 367
Query: 130 FAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGI-WECRMLHGLVIKLMIDG 188
FA RE++E+F M + V+ ++S I++ +L + W CRM +G
Sbjct: 368 FANRGWMRESVELFEQMPVKDVVAWTAIISSFITNGDYLSAVRWFCRMSQ--------EG 419
Query: 189 FVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNV-----------MLNGFAKAGLV 237
N + C+ S+L + ++ ++ ++ + S N+ +++ +AK G +
Sbjct: 420 ---CKPNTITFSCLLSALA-SLAMLNQGRQAHAYSINMGWVFDSAVHTSLISMYAKCGRL 475
Query: 238 ELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISAC 297
A +F I + +++ +MI ++Q +AL ++ M G PN V + +++ C
Sbjct: 476 AEAHHVFSSISNPSLIAINSMITAFVQHGFAEDALKLFTKMQNAGYKPNHVTFLGILTGC 535
Query: 298 GRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWN 357
RA V+ G++ ++ ++ G++ + +
Sbjct: 536 ARAG-----------FVQQGYNYFESMRPV-------------------YGVEPNPEHYT 565
Query: 358 ALIAGFIRNGMIEDARQLFNNMQKRD-VYSWSAMISGYAQNEQPNMALELFHGMVDAGVK 416
++ R G++ +A ++ N+M + D +W+A++S A + N+A
Sbjct: 566 CMVDLLGRAGLLAEALEMINSMPQNDHSDAWAALLS--ASSLHSNLAFAKIAAQKLLEKD 623
Query: 417 PNEITMVSVFCAIASSGTLK 436
P + T +V + SS ++
Sbjct: 624 PYDATAYTVLSKMFSSAGME 643
>gi|242076234|ref|XP_002448053.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
gi|241939236|gb|EES12381.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
Length = 693
Score = 318 bits (814), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 188/528 (35%), Positives = 284/528 (53%), Gaps = 69/528 (13%)
Query: 138 EALEVFRDM-RILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIK--LMIDGFVIIST 194
+AL +F +M + V P++ T+A + S + + R + +K LM D FV+ +
Sbjct: 101 DALHLFVEMLDVASVCPDQHTVACALKSCSRMCTLDVGRGIQAYAVKRGLMADRFVL--S 158
Query: 195 NLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVS 254
+L++MY C + A+ LFD ++E NG VV
Sbjct: 159 SLIHMYASCRDVAAAQLLFDAVEE----------NG---------------------VVM 187
Query: 255 WGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIV 314
W +I Y++ E + M++ ML G+A +++ +V +++ACGR G + +
Sbjct: 188 WNAIITAYMKNGNWMEVVEMFKGMLEVGVAFDEITLVSVVTACGRIGDAKLGKWVAEYVD 247
Query: 315 KAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQ 374
+ G + +I YA CG ELG AR+
Sbjct: 248 EKGLVRNRNLMTALIDMYAKCG---------ELG----------------------KARR 276
Query: 375 LFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGT 434
LF+ MQ RDV +WSAMISGY Q +Q AL LF M A V+PN++TMVSV A A G
Sbjct: 277 LFDGMQSRDVVAWSAMISGYTQADQCREALALFSEMQLAEVEPNDVTMVSVLSACAVLGA 336
Query: 435 LKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAII 494
L+ G+W H Y+ ++L L A++D YAKCG I+ A E F + + + W A+I
Sbjct: 337 LETGKWVHSYIRRKRLSLTIILGTALVDFYAKCGCIDDAVEAFESMPVKNSWT--WTALI 394
Query: 495 CGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNV 554
G+A +G L+++S + K +I+ +TFIGVL C H+ LV+ G R+F SM Y +
Sbjct: 395 KGMATNGRGREALELFSSMRKASIEPTDVTFIGVLMACSHSCLVEEGRRHFDSMTQDYGI 454
Query: 555 EPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAK 614
+P +HYGC+VDLLGRAG +++A + IR+MP++ + VIW LL++ +H NVE+GE A K
Sbjct: 455 KPRAEHYGCVVDLLGRAGLIDEAYQFIRTMPIEPNAVIWRALLSSCAVHKNVEIGEEALK 514
Query: 615 SLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
+ L PSH +LLSNIYA G+W++A IRKEM+D G+++ PG S
Sbjct: 515 QIVSLNPSHSGDYILLSNIYASVGQWKNAAMIRKEMKDRGIEKTPGCS 562
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 121/488 (24%), Positives = 205/488 (42%), Gaps = 115/488 (23%)
Query: 29 ALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLD 88
AL+ CS + G+ I + K GL ++ F+ +SLI++YA C ++ A+ +FD+
Sbjct: 125 ALKSCSRMCTLDVGRGIQAYAVKRGLMADRFVLSSLIHMYASCRDVAAAQLLFDAVEENG 184
Query: 89 PVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRI 148
V N +I+ Y++N W E +E+F+ M
Sbjct: 185 VVMWNAIITAYMKNGN-------------------------------WMEVVEMFKGMLE 213
Query: 149 LGVIPNEVTLASVISSSVHLG----GIWECRML--HGLVIKLMIDGFVIISTNLLNMYCV 202
+GV +E+TL SV+++ +G G W + GLV + T L++MY
Sbjct: 214 VGVAFDEITLVSVVTACGRIGDAKLGKWVAEYVDEKGLVRNRN------LMTALIDMYAK 267
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
C L +AR LFD M+ R++V+W+ M I GY
Sbjct: 268 CGELGKARRLFDGMQSRDVVAWSAM-------------------------------ISGY 296
Query: 263 LQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD 322
Q ++ EAL ++ M + PNDV +V ++SAC A G +HS I +
Sbjct: 297 TQADQCREALALFSEMQLAEVEPNDVTMVSVLSACAVLGALETGKWVHSYIRRKRLSLTI 356
Query: 323 FIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKR 382
+ ++ FYA CG I+ A FE + +W ALI G NG +A +LF++M+K
Sbjct: 357 ILGTALVDFYAKCGCIDDAVEAFESMPVKNSWTWTALIKGMATNGRGREALELFSSMRK- 415
Query: 383 DVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAH 442
A ++P ++T + V A + S ++EGR
Sbjct: 416 ------------------------------ASIEPTDVTFIGVLMACSHSCLVEEGRRHF 445
Query: 443 EYVLNN-SITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSP----WNAIICGL 497
+ + + I ++D+ + G I+ A++ RT + P W A++
Sbjct: 446 DSMTQDYGIKPRAEHYGCVVDLLGRAGLIDEAYQFI-----RTMPIEPNAVIWRALLSSC 500
Query: 498 AMHGDANL 505
A+H + +
Sbjct: 501 AVHKNVEI 508
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/390 (22%), Positives = 155/390 (39%), Gaps = 93/390 (23%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E+ LVS + C G+ + + + GL N + +LI++YAKCG
Sbjct: 220 EITLVSVVTACGRIGDAKLGKWVAEYVDEKGLVRNRNLMTALIDMYAKCG---------- 269
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
L AR +FD + V++++MI G+ Q D REAL +
Sbjct: 270 ---------------------ELGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALAL 308
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
F +M++ V PN+VT+ SV+S+ LG + + +H + + + +I+ T L++ Y
Sbjct: 309 FSEMQLAEVEPNDVTMVSVLSACAVLGALETGKWVHSYIRRKRLSLTIILGTALVDFYAK 368
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
C + +A F+ M +N +W ++ G A G
Sbjct: 369 CGCIDDAVEAFESMPVKNSWTWTALIKGMATNG--------------------------- 401
Query: 263 LQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD 322
R EAL ++ +M I P DV + ++ AC HS +V+
Sbjct: 402 ----RGREALELFSSMRKASIEPTDVTFIGVLMACS-----------HSCLVEE------ 440
Query: 323 FIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ-K 381
GR + + + GIK + ++ R G+I++A Q M +
Sbjct: 441 -------------GRRHFDSMTQDYGIKPRAEHYGCVVDLLGRAGLIDEAYQFIRTMPIE 487
Query: 382 RDVYSWSAMISGYAQNEQPNMALELFHGMV 411
+ W A++S A ++ + E +V
Sbjct: 488 PNAVIWRALLSSCAVHKNVEIGEEALKQIV 517
>gi|8778977|gb|AAF79892.1|AC022472_1 Contains similarity to an unknown protein F28A21.160 gi|7486269
from Arabidopsis thaliana BAC F28A21 gi|T04867 and
contains multiple PPR PF|01535 repeats. EST gb|AI999742
comes from this gene. This gene may be cut off, partial
[Arabidopsis thaliana]
Length = 757
Score = 318 bits (814), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 187/581 (32%), Positives = 312/581 (53%), Gaps = 20/581 (3%)
Query: 95 MISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPN 154
+I+ Y + NDA V P S++S+I + + +++ VF M G+IP+
Sbjct: 56 LIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPD 115
Query: 155 EVTLASVISSSVHLGGIWECRMLH--GLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSL 212
L ++ L + +H V L +D FV ++ +MY C + +AR +
Sbjct: 116 SHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFV--QGSMFHMYMRCGRMGDARKV 173
Query: 213 FDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSK----DVVSWGTMIDGYLQVERL 268
FD M ++++V+ + +L +A+ G +E + + S ++VSW ++ G+ +
Sbjct: 174 FDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYH 233
Query: 269 SEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATI 328
EA+ M++ + G P+ V + ++ + G + G IH ++K G + + +
Sbjct: 234 KEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAM 293
Query: 329 IHFYAACGRI-NLARL--QFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKR--- 382
I Y G + + L QFE+ NA I G RNG+++ A ++F +++
Sbjct: 294 IDMYGKSGHVYGIISLFNQFEMM---EAGVCNAYITGLSRNGLVDKALEMFELFKEQTME 350
Query: 383 -DVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWA 441
+V SW+++I+G AQN + ALELF M AGVKPN +T+ S+ A + L GR
Sbjct: 351 LNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRST 410
Query: 442 HEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHG 501
H + + + N ++ +A+IDMYAKCG IN + VF + T ++ WN+++ G +MHG
Sbjct: 411 HGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMP--TKNLVCWNSLMNGFSMHG 468
Query: 502 DANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHY 561
A + I+ L + +K + I+F +LS C GL D G +YFK M Y ++P L+HY
Sbjct: 469 KAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHY 528
Query: 562 GCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQP 621
CMV+LLGRAG+L++A ++I+ MP + D +WG LL + R+ NV++ E AA+ L L+P
Sbjct: 529 SCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEP 588
Query: 622 SHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
+ + VLLSNIYA G W + SIR +M G+K+ PG S
Sbjct: 589 ENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCS 629
Score = 178 bits (451), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 121/428 (28%), Positives = 217/428 (50%), Gaps = 17/428 (3%)
Query: 26 LVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCS 85
L + + C+ A G+QIH + SGL+ + F+Q S+ ++Y +CG + A+ +FD S
Sbjct: 119 LPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMS 178
Query: 86 TLDPVACNIMISGYIRNDRLNDAREVF---DKTPIKC-CVSYTSMIMGFAQNDCWREALE 141
D V C+ ++ Y R L + + + + I+ VS+ ++ GF ++ +EA+
Sbjct: 179 DKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVV 238
Query: 142 VFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIK--LMIDGFVIISTNLLNM 199
+F+ + LG P++VT++SV+ S + R++HG VIK L+ D VI + +++M
Sbjct: 239 MFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVI--SAMIDM 296
Query: 200 YCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSK----DVVSW 255
Y + SLF++ + N + G ++ GLV+ A E+FE + +VVSW
Sbjct: 297 YGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSW 356
Query: 256 GTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVK 315
++I G Q + EAL ++R M G+ PN V I ++ ACG A G G H V+
Sbjct: 357 TSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVR 416
Query: 316 AGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQL 375
+ + +I YA CGRINL+++ F + ++ WN+L+ GF +G ++ +
Sbjct: 417 VHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSI 476
Query: 376 FNNMQ----KRDVYSWSAMISGYAQNEQPNMALELFHGMVDA-GVKPNEITMVSVFCAIA 430
F ++ K D S+++++S Q + + F M + G+KP + +
Sbjct: 477 FESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLG 536
Query: 431 SSGTLKEG 438
+G L+E
Sbjct: 537 RAGKLQEA 544
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 99/245 (40%), Gaps = 47/245 (19%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+ + S L C A+ G+ H + L N + ++LI++YAKCG
Sbjct: 389 VTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCG----------- 437
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
R+N ++ VF+ P K V + S++ GF+ + +E + +F
Sbjct: 438 --------------------RINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIF 477
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGI---WECRMLHGLVIKLMIDGFVIIS-----TN 195
+ + P+ ++ S++S+ +G W+ K+M + + I +
Sbjct: 478 ESLMRTRLKPDFISFTSLLSACGQVGLTDEGWK-------YFKMMSEEYGIKPRLEHYSC 530
Query: 196 LLNMYCVCSSLVEARSLFDEMK-ERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVS 254
++N+ L EA L EM E + W +LN V+LA E++ + +
Sbjct: 531 MVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPEN 590
Query: 255 WGTMI 259
GT +
Sbjct: 591 PGTYV 595
>gi|255551609|ref|XP_002516850.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543938|gb|EEF45464.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 623
Score = 317 bits (813), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 182/568 (32%), Positives = 302/568 (53%), Gaps = 9/568 (1%)
Query: 97 SGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEV 156
SGYI + AR++FD+ P + V++ SMI ++Q +EAL +F MR P+
Sbjct: 18 SGYIVH-----ARKLFDEMPNRDTVAWNSMITSYSQLGFHQEALSIFYQMRNTNTKPDHF 72
Query: 157 TLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEM 216
T + +S+ G +H LVI L + ++ +L++MY C A +F EM
Sbjct: 73 TFTATLSACAGAGSFPFGTKIHALVIILGYHSSLPVNNSLIDMYGKCFDAFSAGQVFKEM 132
Query: 217 KERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYR 276
+ N VSW +L + +G A E+F +P K ++W TMI G + + L M+R
Sbjct: 133 GDINEVSWCSLLFAYTNSGRFSEASEIFNLMPRKFEIAWNTMIAGLGRYGEIELCLDMFR 192
Query: 277 AMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACG 336
M + P+ LISAC ++ F G +H +++++G+ + +I+ YA G
Sbjct: 193 EMRESLLEPDQWTYSALISACTESLEFLSGCMLHGLVIRSGWSSAMEAKNSILSLYAKFG 252
Query: 337 RINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQ 396
+N A E + SWNA+I +++ G + +A +F ++ ++++ SW++MI+GYA+
Sbjct: 253 SLNDALKVVESTGRLTQVSWNAIIDAYMKVGYVNEAYLMFQSLPEKNIVSWTSMITGYAR 312
Query: 397 NEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNL 456
N AL F M P++ T +V A +S L GR H + N + +
Sbjct: 313 NGYGEEALRFFVAMASNCFLPDDFTFGAVLHACSSLAVLGHGRMVHGCAIRNGFSTYLYV 372
Query: 457 SAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKR 516
+++MYAKCG ++ + F+ I + + +NA++ +HG A+ L++Y D+
Sbjct: 373 GNGLVNMYAKCGDLDGSILAFHDICAK--DLVSFNALLFAFGLHGKASEALQLYEDMMTC 430
Query: 517 NIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLED 576
K + +TFIG+L TC H+GL++ G +F SMKSV+ + + H CMVD+LGR G L +
Sbjct: 431 GTKPDKMTFIGLLMTCSHSGLIEEGRLFFNSMKSVHGLSYEADHVACMVDMLGRGGYLAE 490
Query: 577 AEEVIRSMPMKADVVIWG--TLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIY 634
A+E+++ +DV LL A HG VE+G K+L L+P+ S VL SN+Y
Sbjct: 491 AKELVKKYSKTSDVEASSCEALLGACSAHGEVEMGTYLGKTLKTLEPNKEISYVLQSNLY 550
Query: 635 ADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
G+W++A +RK M D G+K++PG S
Sbjct: 551 CVRGQWKEAEMVRKAMVDEGLKKMPGCS 578
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 124/500 (24%), Positives = 225/500 (45%), Gaps = 43/500 (8%)
Query: 13 QKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCG 72
Q N + L C+ + G +IH+L+ G S+ + NSLI++Y KC
Sbjct: 61 QMRNTNTKPDHFTFTATLSACAGAGSFPFGTKIHALVIILGYHSSLPVNNSLIDMYGKCF 120
Query: 73 LISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQ 132
A +F ++ V+ ++ Y + R ++A E+F+ P K +++ +MI G +
Sbjct: 121 DAFSAGQVFKEMGDINEVSWCSLLFAYTNSGRFSEASEIFNLMPRKFEIAWNTMIAGLGR 180
Query: 133 NDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVII 192
L++FR+MR + P++ T +++IS+ MLHGLVI+ +
Sbjct: 181 YGEIELCLDMFREMRESLLEPDQWTYSALISACTESLEFLSGCMLHGLVIRSGWSSAMEA 240
Query: 193 STNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDV 252
++L++Y SL +A + + VSWN +++ + K G V A +F+ +P K++
Sbjct: 241 KNSILSLYAKFGSLNDALKVVESTGRLTQVSWNAIIDAYMKVGYVNEAYLMFQSLPEKNI 300
Query: 253 VSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSI 312
VSW +MI GY + EAL + AM + P+D ++ AC G G +H
Sbjct: 301 VSWTSMITGYARNGYGEEALRFFVAMASNCFLPDDFTFGAVLHACSSLAVLGHGRMVHGC 360
Query: 313 IVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDA 372
++ GF Y ++ +++ YA CG ++ + L F + S+NAL+ F +G +A
Sbjct: 361 AIRNGFSTYLYVGNGLVNMYAKCGDLDGSILAFHDICAKDLVSFNALLFAFGLHGKASEA 420
Query: 373 RQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASS 432
QL+ + M+ G KP+++T + + + S
Sbjct: 421 LQLYED-------------------------------MMTCGTKPDKMTFIGLLMTCSHS 449
Query: 433 GTLKEGRWAHEYVLNNSITLNDNLS------AAIIDMYAKCGSINTAFE-VFYHIRDRTT 485
G ++EGR + NS+ LS A ++DM + G + A E V + +
Sbjct: 450 GLIEEGR-----LFFNSMKSVHGLSYEADHVACMVDMLGRGGYLAEAKELVKKYSKTSDV 504
Query: 486 SVSPWNAIICGLAMHGDANL 505
S A++ + HG+ +
Sbjct: 505 EASSCEALLGACSAHGEVEM 524
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 162/332 (48%), Gaps = 8/332 (2%)
Query: 220 NIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAML 279
N+ ++ +G + AR+LF+ +P++D V+W +MI Y Q+ EAL+++ M
Sbjct: 4 NLFRITSKISALGSSGYIVHARKLFDEMPNRDTVAWNSMITSYSQLGFHQEALSIFYQMR 63
Query: 280 CDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRIN 339
P+ +SAC A +F G +IH++++ G+ + ++I Y C
Sbjct: 64 NTNTKPDHFTFTATLSACAGAGSFPFGTKIHALVIILGYHSSLPVNNSLIDMYGKCFDAF 123
Query: 340 LARLQF-ELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNE 398
A F E+G + + SW +L+ + +G +A ++FN M ++ +W+ MI+G +
Sbjct: 124 SAGQVFKEMGDINEV-SWCSLLFAYTNSGRFSEASEIFNLMPRKFEIAWNTMIAGLGRYG 182
Query: 399 QPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSA 458
+ + L++F M ++ ++P++ T ++ A S G H V+ + +
Sbjct: 183 EIELCLDMFREMRESLLEPDQWTYSALISACTESLEFLSGCMLHGLVIRSGWSSAMEAKN 242
Query: 459 AIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNI 518
+I+ +YAK GS+N A +V R T VS WNAII G N ++ L ++NI
Sbjct: 243 SILSLYAKFGSLNDALKVV-ESTGRLTQVS-WNAIIDAYMKVGYVNEAYLMFQSLPEKNI 300
Query: 519 KLNSITFIGVLSTCCHAGLVDLGERYFKSMKS 550
+++ +++ G + R+F +M S
Sbjct: 301 ----VSWTSMITGYARNGYGEEALRFFVAMAS 328
>gi|8920616|gb|AAF81338.1|AC007767_18 Contains similarity to a hypothetical protein F19I3.26 gi|7485810
from Arabidopsis thaliana BAC F19I3 gb|AC004238. It
contains a PPR repeat domain PF|01535. ESTs gb|AV539170,
gb|AV551571, gb|AA597781, gb|AV544524, gb|AV531577 and
gb|AV533492 come from this gene [Arabidopsis thaliana]
Length = 864
Score = 317 bits (813), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 206/678 (30%), Positives = 346/678 (51%), Gaps = 65/678 (9%)
Query: 39 VSQGQQIHSL-----IFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACN 93
+S+G +H+ I + G + SL++ YAK G + +A+ +F+ + V CN
Sbjct: 156 LSEGGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPERNIVTCN 215
Query: 94 IMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIP 153
M++GY++ R+N+A +F + P K VS+T M+ + +A+E+F +M P
Sbjct: 216 AMLTGYVKCRRMNEAWTLFREMP-KNVVSWTVMLTALCDDGRSEDAVELFDEM------P 268
Query: 154 --NEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARS 211
N V+ ++++ + G + + + V M V+ ++ Y + EA+
Sbjct: 269 ERNVVSWNTLVTGLIRNGDMEKAKQ----VFDAMPSRDVVSWNAMIKGYIENDGMEEAKL 324
Query: 212 LFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEA 271
LF +M E+N+V+W M+ G+ + G V A LF +P +++VSW MI G+ E EA
Sbjct: 325 LFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREA 384
Query: 272 LTMYRAML--CDGIAPNDVMIVDLISACGR-AMAFGE-GLQIHSIIVKAGFDCYDF---I 324
L ++ M D ++PN ++ L ACG + F G Q+H+ ++ G++ D +
Sbjct: 385 LMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRL 444
Query: 325 QATIIHFYAACGRI----NLARLQFEL---------------------------GIKDHI 353
+++H YA+ G I +L F+L + D +
Sbjct: 445 AKSLVHMYASSGLIASAQSLLNESFDLQSCNIIINRYLKNGDLERAETLFERVKSLHDKV 504
Query: 354 ASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDA 413
SW ++I G++ G + A LF + +D +W+ MISG QNE A L MV
Sbjct: 505 -SWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRC 563
Query: 414 GVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDN--LSAAIIDMYAKCGSIN 471
G+KP T + + ++ L +G+ H + + + + L +++ MYAKCG+I
Sbjct: 564 GLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIE 623
Query: 472 TAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLST 531
A+E+F + + T WN++I GL+ HG A+ L ++ ++ K NS+TF+GVLS
Sbjct: 624 DAYEIFAKMVQKDT--VSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSA 681
Query: 532 CCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVV 591
C H+GL+ G FK+MK Y+++P + HY M+DLLGRAG+L++AEE I ++P D
Sbjct: 682 CSHSGLITRGLELFKAMKETYSIQPGIDHYISMIDLLGRAGKLKEAEEFISALPFTPDHT 741
Query: 592 IWGTLLAASRIHGNVE----VGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIR 647
++G LL ++ + + ERAA L L P + P V L N+YA GR + +R
Sbjct: 742 VYGALLGLCGLNWRDKDAEGIAERAAMRLLELDPVNAPGHVALCNVYAGLGRHDMEKEMR 801
Query: 648 KEMRDCGMKRLPGFSGVV 665
KEM G+K+ PG S VV
Sbjct: 802 KEMGIKGVKKTPGCSWVV 819
>gi|449457516|ref|XP_004146494.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Cucumis sativus]
Length = 650
Score = 317 bits (813), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 174/477 (36%), Positives = 273/477 (57%), Gaps = 24/477 (5%)
Query: 205 SLVEARSLFDEMKERNIVSWNVMLNGFAKAG--LVELAREL--------------FERIP 248
S++ +LF ++K+ V +++ NG ++ L +L R L F ++
Sbjct: 47 SILHDCTLFSQIKQ---VHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVN 103
Query: 249 SKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQ 308
+ W MI GY LSE+ Y M DG+ P L ACG A+ G Q
Sbjct: 104 YPNPFLWTAMIRGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQ 163
Query: 309 IHS-IIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNG 367
+H+ I+ GF ++ ++I Y CG + AR F+ + + SW LI + + G
Sbjct: 164 VHAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYG 223
Query: 368 MIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFC 427
+E A LF+++ +D+ +W+AM++GYAQN +P ALE F M D G++ +E+T+ V
Sbjct: 224 DMESASGLFDDLPLKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVIS 283
Query: 428 AIASSGTLKEGRWAHEYVLNNSITLNDNL--SAAIIDMYAKCGSINTAFEVFYHIRDRTT 485
A A G +K W + + + N+ +A+IDMY+KCGS + A++VF +++R
Sbjct: 284 ACAQLGAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKER-- 341
Query: 486 SVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYF 545
+V ++++I G AMHG A+ L+++ D+ K I+ N +TFIG+LS C HAGLV+ G + F
Sbjct: 342 NVFSYSSMILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLF 401
Query: 546 KSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGN 605
M+ + V P HY CMVDLLGRAG LE+A +++++MPM+ + +WG LL A RIHGN
Sbjct: 402 AKMEKFFGVAPSPDHYACMVDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHGN 461
Query: 606 VEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
++ + AA L L+P+ + +LLSNIYA AGRWE+ +RK +R+ G K+ PG S
Sbjct: 462 PDIAQIAANELFKLEPNGIGNYILLSNIYASAGRWEEVSKLRKVIREKGFKKNPGCS 518
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 146/289 (50%), Gaps = 34/289 (11%)
Query: 30 LRYCSAHIAVSQGQQIHS-LIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLD 88
+ C A + + G+Q+H+ I G S+ ++ NS+I+LY KCG + A+ +FD S D
Sbjct: 149 FKACGAALNMDLGKQVHAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERD 208
Query: 89 PVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRI 148
V+ +I Y + + A +FD P+K V++T+M+ G+AQN +EALE F+ M+
Sbjct: 209 VVSWTELIVAYAKYGDMESASGLFDDLPLKDMVAWTAMVTGYAQNGRPKEALEYFQKMQD 268
Query: 149 LGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIK--LMIDGFVIISTNLLNMYCVCSSL 206
+G+ +EVTLA VIS+ LG + + + + G V++ + L++MY C S
Sbjct: 269 VGMETDEVTLAGVISACAQLGAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSP 328
Query: 207 VEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVE 266
EA +F+ MKERN+ S++ M+ G+A G
Sbjct: 329 DEAYKVFEVMKERNVFSYSSMILGYAMHG------------------------------- 357
Query: 267 RLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVK 315
R AL ++ ML I PN V + ++SAC A +G Q+ + + K
Sbjct: 358 RAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEK 406
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 116/498 (23%), Positives = 222/498 (44%), Gaps = 80/498 (16%)
Query: 18 QNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQA 77
Q E L+S L C+ SQ +Q+H+ I ++GL +++ LI + K +
Sbjct: 37 QRKLLEWRLMSILHDCTL---FSQIKQVHAHIIRNGLSQCSYVLTKLIRMLTKVDV---- 89
Query: 78 KSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWR 137
P+ ++ VF + +T+MI G+A
Sbjct: 90 -----------PMGSYPLL--------------VFGQVNYPNPFLWTAMIRGYALQGLLS 124
Query: 138 EALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGF---VIIST 194
E+ + MR GV P T +++ + + + +H I +I GF + +
Sbjct: 125 ESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTI--LIGGFASDLYVGN 182
Query: 195 NLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVS 254
+++++Y C L AR +FDEM ER++VSW ++ +AK G +E A LF+ +P KD+V+
Sbjct: 183 SMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLPLKDMVA 242
Query: 255 WGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIV 314
W M+ GY Q R EAL ++ M G+ ++V + +ISAC + A I I
Sbjct: 243 WTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHANWIRDIAE 302
Query: 315 KAGFDCYD--FIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDA 372
++GF + + +I Y+ CG + A FE+ + ++ S++++I G+ +G A
Sbjct: 303 RSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMHGRAHSA 362
Query: 373 RQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASS 432
QLF++M K + ++PN++T + + A + +
Sbjct: 363 LQLFHDMLKTE-------------------------------IRPNKVTFIGILSACSHA 391
Query: 433 GTLKEGRWAHEYVLN-NSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSP-- 489
G +++GR + + + + A ++D+ + G + A ++ +T + P
Sbjct: 392 GLVEQGRQLFAKMEKFFGVAPSPDHYACMVDLLGRAGCLEEALDLV-----KTMPMEPNG 446
Query: 490 --WNAIICGLAMHGDANL 505
W A++ +HG+ ++
Sbjct: 447 GVWGALLGACRIHGNPDI 464
>gi|255539585|ref|XP_002510857.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549972|gb|EEF51459.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 641
Score = 317 bits (813), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 188/559 (33%), Positives = 302/559 (54%), Gaps = 34/559 (6%)
Query: 93 NIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRD-MRILGV 151
N++ S + LN A F + + + +I G +Q++ EA+ ++ D M G+
Sbjct: 94 NVIKSYALSRSHLNKANFAFIQIGQPTLLIFNYLIRGLSQSENPNEAIVMYSDLMYNQGI 153
Query: 152 IPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARS 211
+ + +T + + + + ++ H V+KL ++ I +L+ MY L A+
Sbjct: 154 LGDNLTFIYLFKACSRVKDVLHGQVFHVQVLKLGFGSYLFIENSLIRMYGYFGELGYAQK 213
Query: 212 LFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEA 271
+FD+M +R++VSWN ++I GY Q R E
Sbjct: 214 VFDKMDDRDLVSWN-------------------------------SLICGYSQCNRFKEV 242
Query: 272 LTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHF 331
L ++ M + + V +V +I AC G + I D ++ ++I
Sbjct: 243 LDLFNLMREANVTADSVTMVKVILACSYLCEDGVVDSMVKYIEDKHVDIDVYLGNSLIDM 302
Query: 332 YAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMI 391
Y G ++LAR F+ + +I SWNA++ G+ G + A++LFN M R+V SW+ MI
Sbjct: 303 YGRRGLVDLARRVFDRMQEKNIVSWNAMLTGYATAGDLVAAKKLFNEMPIRNVISWTCMI 362
Query: 392 SGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSIT 451
SG AQ Q + AL+LF M+DA VKP+EIT+ SV A + G L G+ HEY+ + I
Sbjct: 363 SGCAQANQCSDALKLFQEMMDANVKPDEITVSSVLSACSHLGLLDTGQTVHEYMCRHDIK 422
Query: 452 LNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYS 511
+ + A+IDMY KCG ++ A EVF+ ++ + SVS W ++I GLA++G + +++S
Sbjct: 423 SDVYVGNALIDMYCKCGVVDKALEVFHDMK-KKDSVS-WTSMILGLAVNGFVDNVFELFS 480
Query: 512 DLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRA 571
+ + ++ +FIG+L C HAGLVD G YF+SM+ VY + P++KHYGC+VDLL R+
Sbjct: 481 QMLRDGLQPTHGSFIGILLACTHAGLVDKGLEYFESMEHVYGLRPEMKHYGCVVDLLSRS 540
Query: 572 GQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLS 631
G+L+ A E I+ MP+ DVV+W LL+A ++H N+ + E A L L PS+ + VLLS
Sbjct: 541 GELDRAYEFIKQMPVVPDVVLWRILLSACKLHRNLVLAEIATSKLLELDPSNSGNYVLLS 600
Query: 632 NIYADAGRWEDAFSIRKEM 650
N YA + RW+DA +R M
Sbjct: 601 NTYAGSDRWDDASRMRDLM 619
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 122/482 (25%), Positives = 213/482 (44%), Gaps = 72/482 (14%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
L + + CS V GQ H + K G S FI+NSLI +Y G + A+ +FD
Sbjct: 158 LTFIYLFKACSRVKDVLHGQVFHVQVLKLGFGSYLFIENSLIRMYGYFGELGYAQKVFDK 217
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
D V+ N +I GY + +R ++E L++F
Sbjct: 218 MDDRDLVSWNSLICGYSQCNR-------------------------------FKEVLDLF 246
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
MR V + VT+ VI + +L + + +D V + +L++MY
Sbjct: 247 NLMREANVTADSVTMVKVILACSYLCEDGVVDSMVKYIEDKHVDIDVYLGNSLIDMYGRR 306
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYL 263
+ AR +FD M+E+NIVSWN ML G+A AG + A++LF +P ++V+SW MI G
Sbjct: 307 GLVDLARRVFDRMQEKNIVSWNAMLTGYATAGDLVAAKKLFNEMPIRNVISWTCMISGCA 366
Query: 264 QVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDF 323
Q + S+AL +++ M+ + P+++ + ++SAC G +H + +
Sbjct: 367 QANQCSDALKLFQEMMDANVKPDEITVSSVLSACSHLGLLDTGQTVHEYMCRH------- 419
Query: 324 IQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRD 383
IK + NALI + + G+++ A ++F++M+K+D
Sbjct: 420 ------------------------DIKSDVYVGNALIDMYCKCGVVDKALEVFHDMKKKD 455
Query: 384 VYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG----- 438
SW++MI G A N + ELF M+ G++P + + + A +G + +G
Sbjct: 456 SVSWTSMILGLAVNGFVDNVFELFSQMLRDGLQPTHGSFIGILLACTHAGLVDKGLEYFE 515
Query: 439 RWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLA 498
H Y L + ++D+ ++ G ++ A+E F V W ++
Sbjct: 516 SMEHVYGLRPEM----KHYGCVVDLLSRSGELDRAYE-FIKQMPVVPDVVLWRILLSACK 570
Query: 499 MH 500
+H
Sbjct: 571 LH 572
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 62/147 (42%), Gaps = 31/147 (21%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E+ + S L CS + GQ +H + + ++S+ ++ N+LI++Y KCG++ +
Sbjct: 390 EITVSSVLSACSHLGLLDTGQTVHEYMCRHDIKSDVYVGNALIDMYCKCGVVDK------ 443
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
A EVF K VS+TSMI+G A N E+
Sbjct: 444 -------------------------ALEVFHDMKKKDSVSWTSMILGLAVNGFVDNVFEL 478
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLG 169
F M G+ P + ++ + H G
Sbjct: 479 FSQMLRDGLQPTHGSFIGILLACTHAG 505
>gi|147791119|emb|CAN74703.1| hypothetical protein VITISV_029224 [Vitis vinifera]
Length = 677
Score = 317 bits (813), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 196/632 (31%), Positives = 321/632 (50%), Gaps = 76/632 (12%)
Query: 41 QGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYI 100
QGQ +H+ + K+G + + +L ++Y K L+S A
Sbjct: 111 QGQILHTQLIKTGFHLDIYAATALADMYMKLHLLSYA----------------------- 147
Query: 101 RNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLAS 160
+VF++ P + S I GF++N +REAL F+ + + PN VT+AS
Sbjct: 148 --------LKVFEEMPHRNLPSLNVTISGFSRNGYFREALGAFKQVGLGNFRPNSVTIAS 199
Query: 161 VISS--SVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKE 218
V+ + SV L G +H L IKL ++ + ++T ++ MY C LV
Sbjct: 200 VLPACASVELDG-----QVHCLAIKLGVESDIYVATAVVTMYSNCGELV----------- 243
Query: 219 RNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAM 278
LA+++F++I K+VVS+ I G LQ +++ +
Sbjct: 244 --------------------LAKKVFDQILDKNVVSYNAFISGLLQNGAPHLVFDVFKDL 283
Query: 279 L-CDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGR 337
L G PN V +V ++SAC + + G QIH ++VK + + ++ Y+ CG
Sbjct: 284 LESSGEVPNSVTLVSILSACSKLLYIRFGRQIHGLVVKIEINFDTMVGTALVDMYSKCGC 343
Query: 338 INLARLQF-ELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKR----DVYSWSAMIS 392
+ A F EL ++ +WN++IAG + NG + A +LF ++ D +W+ MIS
Sbjct: 344 WHWAYGIFIELSGSRNLVTWNSMIAGMMLNGQSDIAVELFEQLEPEGLEPDSATWNTMIS 403
Query: 393 GYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITL 452
G++Q Q A + FH M AGV + ++ S+ A ++ L+ G+ H + + +I
Sbjct: 404 GFSQQGQVVEAFKFFHKMQSAGVIASLKSITSLLRACSALSALQSGKEIHGHTIRTNIDT 463
Query: 453 NDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSD 512
++ +S A+IDMY KCG A VF + + + WNA+I G +G +I++
Sbjct: 464 DEFISTALIDMYMKCGHSYLARRVFCQFQIKPDDPAFWNAMISGYGRNGKYQSAFEIFNQ 523
Query: 513 LEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAG 572
+++ ++ NS T + +LS C H G +D G + FK M Y + P +H+GCMVDLLGR+G
Sbjct: 524 MQEEKVQPNSATLVSILSVCSHTGEIDRGWQLFKMMNRDYGLNPTSEHFGCMVDLLGRSG 583
Query: 573 QLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSN 632
+L++A+E+I MP +A V ++ +LL A R H + +GE AK L+ L+P V+LSN
Sbjct: 584 RLKEAQELIHEMP-EASVSVFASLLGACRHHSDSALGEEMAKKLSELEPQDPTPFVILSN 642
Query: 633 IYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
IYA GRW D +R+ M D G+K+ PG S +
Sbjct: 643 IYAVQGRWGDVERVREMMNDRGLKKPPGCSSI 674
Score = 188 bits (477), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 141/507 (27%), Positives = 231/507 (45%), Gaps = 81/507 (15%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+ + S L C++ V Q+H L K G+ES+ ++ +++ +Y+ CG + AK +FD
Sbjct: 195 VTIASVLPACAS---VELDGQVHCLAIKLGVESDIYVATAVVTMYSNCGELVLAKKVFD- 250
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
++ DK VSY + I G QN +VF
Sbjct: 251 --------------------------QILDKN----VVSYNAFISGLLQNGAPHLVFDVF 280
Query: 144 RD-MRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
+D + G +PN VTL S++S+ L I R +HGLV+K+ I+ ++ T L++MY
Sbjct: 281 KDLLESSGEVPNSVTLVSILSACSKLLYIRFGRQIHGLVVKIEINFDTMVGTALVDMYSK 340
Query: 203 CSSLVEARSLFDEMK-ERNIVSWNVMLNGFAKAGLVELARELFERIPSK----DVVSWGT 257
C A +F E+ RN+V+WN M+ G G ++A ELFE++ + D +W T
Sbjct: 341 CGCWHWAYGIFIELSGSRNLVTWNSMIAGMMLNGQSDIAVELFEQLEPEGLEPDSATWNT 400
Query: 258 MIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAG 317
MI G+ Q ++ EA + M G+ + I L+ AC A G +IH ++
Sbjct: 401 MISGFSQQGQVVEAFKFFHKMQSAGVIASLKSITSLLRACSALSALQSGKEIHGHTIRTN 460
Query: 318 FDCYDFIQATIIHFYAACGRINLARLQF-ELGIK-DHIASWNALIAGFIRNGMIEDARQL 375
D +FI +I Y CG LAR F + IK D A WNA+I+G+ RNG + A ++
Sbjct: 461 IDTDEFISTALIDMYMKCGHSYLARRVFCQFQIKPDDPAFWNAMISGYGRNGKYQSAFEI 520
Query: 376 FNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTL 435
FN MQ+ V+PN T+VS+ + +G +
Sbjct: 521 FNQMQEEK-------------------------------VQPNSATLVSILSVCSHTGEI 549
Query: 436 KEGRWAHEYVLNNSITLNDNLS--AAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAI 493
G W ++N LN ++D+ + G + A E+ + + + SVS + ++
Sbjct: 550 DRG-WQLFKMMNRDYGLNPTSEHFGCMVDLLGRSGRLKEAQELIHEMPE--ASVSVFASL 606
Query: 494 ICGLAMHGDANL---TLKIYSDLEKRN 517
+ H D+ L K S+LE ++
Sbjct: 607 LGACRHHSDSALGEEMAKKLSELEPQD 633
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 99/431 (22%), Positives = 196/431 (45%), Gaps = 67/431 (15%)
Query: 121 VSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGL 180
+S I N +REAL ++ + V+ ++ T ++ +S L + ++LH
Sbjct: 59 ISMKRDIAKLVSNGFYREALSLYSKLHSSSVLEHKFTFPFLLKASAKLNSPLQGQILHTQ 118
Query: 181 VIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELA 240
+IK + +T L +MY L A +F+EM RN+ S NV ++GF++
Sbjct: 119 LIKTGFHLDIYAATALADMYMKLHLLSYALKVFEEMPHRNLPSLNVTISGFSR------- 171
Query: 241 RELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRA 300
+GY + EAL ++ + PN V I ++ AC
Sbjct: 172 -------------------NGYFR-----EALGAFKQVGLGNFRPNSVTIASVLPACASV 207
Query: 301 MAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALI 360
G Q+H + +K G + ++ ++ Y+ CG + LA+ F+ + ++ S+NA I
Sbjct: 208 ELDG---QVHCLAIKLGVESDIYVATAVVTMYSNCGELVLAKKVFDQILDKNVVSYNAFI 264
Query: 361 AGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVD-AGVKPNE 419
+G ++NG P++ ++F +++ +G PN
Sbjct: 265 SGLLQNG-------------------------------APHLVFDVFKDLLESSGEVPNS 293
Query: 420 ITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYH 479
+T+VS+ A + ++ GR H V+ I + + A++DMY+KCG + A+ +F
Sbjct: 294 VTLVSILSACSKLLYIRFGRQIHGLVVKIEINFDTMVGTALVDMYSKCGCWHWAYGIFIE 353
Query: 480 IRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVD 539
+ V+ WN++I G+ ++G +++ ++++ LE ++ +S T+ ++S G V
Sbjct: 354 LSGSRNLVT-WNSMIAGMMLNGQSDIAVELFEQLEPEGLEPDSATWNTMISGFSQQGQVV 412
Query: 540 LGERYFKSMKS 550
++F M+S
Sbjct: 413 EAFKFFHKMQS 423
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 152/311 (48%), Gaps = 18/311 (5%)
Query: 7 HSVFNSQKANLQNS---DYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNS 63
H VF+ K L++S + LVS L CS + + G+QIH L+ K + +T + +
Sbjct: 274 HLVFDVFKDLLESSGEVPNSVTLVSILSACSKLLYIRFGRQIHGLVVKIEINFDTMVGTA 333
Query: 64 LINLYAKCGLISQAKSMFDSCS-TLDPVACNIMISGYIRNDRLNDAREVFDKTPIKC--- 119
L+++Y+KCG A +F S + + V N MI+G + N + + A E+F++ +
Sbjct: 334 LVDMYSKCGCWHWAYGIFIELSGSRNLVTWNSMIAGMMLNGQSDIAVELFEQLEPEGLEP 393
Query: 120 -CVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLH 178
++ +MI GF+Q EA + F M+ GVI + ++ S++ + L + + +H
Sbjct: 394 DSATWNTMISGFSQQGQVVEAFKFFHKMQSAGVIASLKSITSLLRACSALSALQSGKEIH 453
Query: 179 GLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLF--DEMKERNIVSWNVMLNGFAKAGL 236
G I+ ID IST L++MY C AR +F ++K + WN M++G+ + G
Sbjct: 454 GHTIRTNIDTDEFISTALIDMYMKCGHSYLARRVFCQFQIKPDDPAFWNAMISGYGRNGK 513
Query: 237 VELARELFERIPSKDVVSWGTMIDGYLQV----ERLSEALTMYRAMLCD-GIAPNDVM-- 289
+ A E+F ++ + V + L V + +++ M D G+ P
Sbjct: 514 YQSAFEIFNQMQEEKVQPNSATLVSILSVCSHTGEIDRGWQLFKMMNRDYGLNPTSEHFG 573
Query: 290 -IVDLISACGR 299
+VDL+ GR
Sbjct: 574 CMVDLLGRSGR 584
Score = 43.5 bits (101), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 78/179 (43%), Gaps = 6/179 (3%)
Query: 403 ALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIID 462
AL L+ + + V ++ T + A A + +G+ H ++ L+ + A+ D
Sbjct: 77 ALSLYSKLHSSSVLEHKFTFPFLLKASAKLNSPLQGQILHTQLIKTGFHLDIYAATALAD 136
Query: 463 MYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNS 522
MY K ++ A +VF + R ++ N I G + +G L + + N + NS
Sbjct: 137 MYMKLHLLSYALKVFEEMPHR--NLPSLNVTISGFSRNGYFREALGAFKQVGLGNFRPNS 194
Query: 523 ITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVI 581
+T VL C L G+ + ++K VE D+ +V + G+L A++V
Sbjct: 195 VTIASVLPACASVELD--GQVHCLAIK--LGVESDIYVATAVVTMYSNCGELVLAKKVF 249
>gi|413952893|gb|AFW85542.1| hypothetical protein ZEAMMB73_270374 [Zea mays]
Length = 716
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 205/646 (31%), Positives = 314/646 (48%), Gaps = 102/646 (15%)
Query: 21 DYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSM 80
D+ L+L AL+ C S G+ +H K G ++ F+ NSL+++YAK
Sbjct: 166 DFVLSL--ALKACIRSAEYSYGRSLHCDAIKVG-GADGFVMNSLVDMYAKA--------- 213
Query: 81 FDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREAL 140
+ L AR+VF++ P + VS+TSMI G QN + L
Sbjct: 214 ----------------------EDLECARKVFERIPDRNVVSWTSMISGCVQNGFASDGL 251
Query: 141 EVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIK--LMIDGFVIISTNLLN 198
+F MR V P+E T+A+VI++ L G+ + R +HG VIK LM + F IS LL+
Sbjct: 252 LLFNKMRQDNVPPSEYTIATVITACSALFGLHQGRWMHGSVIKQGLMSNSF--ISAALLD 309
Query: 199 MYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTM 258
MY C G ++ AR +F+ + D+V W TM
Sbjct: 310 MYVKC-------------------------------GELDHARCVFDELSYIDLVLWTTM 338
Query: 259 IDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGF 318
I GY Q +AL ++ IAPN V ++SA + G IH + VK G
Sbjct: 339 IVGYTQNGNPLDALRLFLDKRFANIAPNSVTTATVLSASAQLRDLSLGKSIHGLAVKLGL 398
Query: 319 DCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNN 378
Y+ + ++ YA C ++ +A ++F
Sbjct: 399 VEYNVVGNALVDMYAKCQAVS-------------------------------EADRIFGR 427
Query: 379 MQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG 438
+ +DV +W++MISGYA+N + AL LF M G P+ I++V+ A G L G
Sbjct: 428 ISNKDVVAWNSMISGYAENNMGDDALMLFKQMSLQGSSPDAISVVNALSASVCLGDLLIG 487
Query: 439 RWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLA 498
+ H Y + ++ N + A++++Y KCG + +A VF + DR + W A+I G
Sbjct: 488 KSIHGYAVKHAFVSNIYVDTALLNLYNKCGDLLSARRVFDEMNDRNSVT--WCAMIGGYG 545
Query: 499 MHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDL 558
M GD+ ++ ++ ++ K + N I F +LSTC H+G+V G+RYF SM +N+ P +
Sbjct: 546 MQGDSAGSIHLFGEMLKDGVYPNDIAFTSILSTCSHSGMVTAGKRYFDSMAQHFNITPSM 605
Query: 559 KHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAG 618
KHY CMVD+L RAG LEDA E I +MPM+AD +WG L +H ++ E A K +
Sbjct: 606 KHYACMVDVLARAGNLEDALEFIDNMPMQADTSVWGAFLHGCELHSRLQFAEEAIKRMMV 665
Query: 619 LQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
L P VL+SN+Y G W+ + +IR+ M++ G+ +LPG S V
Sbjct: 666 LHPERPDLYVLISNLYTSNGMWDKSLAIRRWMQEKGLVKLPGCSSV 711
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 126/497 (25%), Positives = 220/497 (44%), Gaps = 104/497 (20%)
Query: 9 VFNSQKA-NLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINL 67
+FN + N+ S+Y +A V + CSA + QG+ +H + K GL SN+FI +L+++
Sbjct: 253 LFNKMRQDNVPPSEYTIATV--ITACSALFGLHQGRWMHGSVIKQGLMSNSFISAALLDM 310
Query: 68 YAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMI 127
Y KCG L+ AR VFD+ V +T+MI
Sbjct: 311 YVKCG-------------------------------ELDHARCVFDELSYIDLVLWTTMI 339
Query: 128 MGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMID 187
+G+ QN +AL +F D R + PN VT A+V+S+S L + + +HGL +KL +
Sbjct: 340 VGYTQNGNPLDALRLFLDKRFANIAPNSVTTATVLSASAQLRDLSLGKSIHGLAVKLGLV 399
Query: 188 GFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERI 247
+ ++ L++MY C ++ EA +F + +++V+WN M++G+A+ + +
Sbjct: 400 EYNVVGNALVDMYAKCQAVSEADRIFGRISNKDVVAWNSMISGYAENNMGD--------- 450
Query: 248 PSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGE-- 305
+AL +++ M G +P+ + +V+ +SA ++ G+
Sbjct: 451 ----------------------DALMLFKQMSLQGSSPDAISVVNALSA---SVCLGDLL 485
Query: 306 -GLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFI 364
G IH VK F ++ +++ Y CG + AR
Sbjct: 486 IGKSIHGYAVKHAFVSNIYVDTALLNLYNKCGDLLSAR---------------------- 523
Query: 365 RNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVS 424
++F+ M R+ +W AMI GY ++ LF M+ GV PN+I S
Sbjct: 524 ---------RVFDEMNDRNSVTWCAMIGGYGMQGDSAGSIHLFGEMLKDGVYPNDIAFTS 574
Query: 425 VFCAIASSGTLKEG-RWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDR 483
+ + SG + G R+ + +IT + A ++D+ A+ G++ A E F
Sbjct: 575 ILSTCSHSGMVTAGKRYFDSMAQHFNITPSMKHYACMVDVLARAGNLEDALE-FIDNMPM 633
Query: 484 TTSVSPWNAIICGLAMH 500
S W A + G +H
Sbjct: 634 QADTSVWGAFLHGCELH 650
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 126/519 (24%), Positives = 216/519 (41%), Gaps = 80/519 (15%)
Query: 95 MISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIP- 153
++S Y L AR VFD TP SY +M+ Q + +A+ + DMR P
Sbjct: 103 LLSCYAALGDLASARMVFDGTPRPDAYSYGAMLWCLVQTERHADAVALHHDMRRRRPCPE 162
Query: 154 --NEVTLASVISSSVHLGGIWECRMLHGLVIKL-MIDGFVIISTNLLNMYCVCSSLVEAR 210
++ L+ + + + R LH IK+ DGFV+ S L++MY L AR
Sbjct: 163 AQDDFVLSLALKACIRSAEYSYGRSLHCDAIKVGGADGFVMNS--LVDMYAKAEDLECAR 220
Query: 211 SLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSE 270
+F+ + +RN+VSW M++G + G S+
Sbjct: 221 KVFERIPDRNVVSWTSMISGCVQNGFA-------------------------------SD 249
Query: 271 ALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIH 330
L ++ M D + P++ I +I+AC +G +H ++K G FI A ++
Sbjct: 250 GLLLFNKMRQDNVPPSEYTIATVITACSALFGLHQGRWMHGSVIKQGLMSNSFISAALLD 309
Query: 331 FYAACGRINLARLQF-ELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSA 389
Y CG ++ AR F EL D + W +I G+ +NG DA +LF + KR
Sbjct: 310 MYVKCGELDHARCVFDELSYID-LVLWTTMIVGYTQNGNPLDALRLF--LDKR------- 359
Query: 390 MISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNS 449
A + PN +T +V A A L G+ H +
Sbjct: 360 ----------------------FANIAPNSVTTATVLSASAQLRDLSLGKSIHGLAVKLG 397
Query: 450 ITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKI 509
+ + + A++DMYAKC +++ A +F I ++ V WN++I G A + + L +
Sbjct: 398 LVEYNVVGNALVDMYAKCQAVSEADRIFGRISNK--DVVAWNSMISGYAENNMGDDALML 455
Query: 510 YSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGER---YFKSMKSVYNVEPDLKHYGCMVD 566
+ + + ++I+ + LS G + +G+ Y V N+ D +++
Sbjct: 456 FKQMSLQGSSPDAISVVNALSASVCLGDLLIGKSIHGYAVKHAFVSNIYVDT----ALLN 511
Query: 567 LLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGN 605
L + G L A V M + + V W ++ + G+
Sbjct: 512 LYNKCGDLLSARRVFDEMNDR-NSVTWCAMIGGYGMQGD 549
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 103/421 (24%), Positives = 186/421 (44%), Gaps = 58/421 (13%)
Query: 195 NLLNMYCVCSSLVEARSLFDEMKER-------NIVSWNVMLNGFAKAGLVELARELFERI 247
+LL + C +L+ R L + ++ + +L+ +A G + AR +F+
Sbjct: 64 DLLRLLPSCGTLLSLRVLHARLLTHPQGLLLGSLRARTKLLSCYAALGDLASARMVFDGT 123
Query: 248 PSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAP---NDVMIVDLISACGRAMAFG 304
P D S+G M+ +Q ER ++A+ ++ M P +D ++ + AC R+ +
Sbjct: 124 PRPDAYSYGAMLWCLVQTERHADAVALHHDMRRRRPCPEAQDDFVLSLALKACIRSAEYS 183
Query: 305 EGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFI 364
G +H +K G F+ +++ YA + AR FE ++ SW ++I+G +
Sbjct: 184 YGRSLHCDAIKVG-GADGFVMNSLVDMYAKAEDLECARKVFERIPDRNVVSWTSMISGCV 242
Query: 365 RNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVS 424
+NG D LFN M++ + V P+E T+ +
Sbjct: 243 QNGFASDGLLLFNKMRQDN-------------------------------VPPSEYTIAT 271
Query: 425 VFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRT 484
V A ++ L +GRW H V+ + N +SAA++DMY KCG ++ A VF +
Sbjct: 272 VITACSALFGLHQGRWMHGSVIKQGLMSNSFISAALLDMYVKCGELDHARCVFDEL--SY 329
Query: 485 TSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERY 544
+ W +I G +G+ L+++ D NI NS+T VLS + LG
Sbjct: 330 IDLVLWTTMIVGYTQNGNPLDALRLFLDKRFANIAPNSVTTATVLSASAQLRDLSLG--- 386
Query: 545 FKSMKSVYN--VEPDLKHY----GCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLA 598
KS++ V+ L Y +VD+ + + +A+ + + K DVV W ++++
Sbjct: 387 ----KSIHGLAVKLGLVEYNVVGNALVDMYAKCQAVSEADRIFGRISNK-DVVAWNSMIS 441
Query: 599 A 599
Sbjct: 442 G 442
>gi|125591422|gb|EAZ31772.1| hypothetical protein OsJ_15924 [Oryza sativa Japonica Group]
Length = 855
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 188/620 (30%), Positives = 316/620 (50%), Gaps = 34/620 (5%)
Query: 44 QIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRND 103
Q+ L +K + ++ +L++++ +CG + A +F N M++GY +
Sbjct: 149 QLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLY 208
Query: 104 RLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVIS 163
++ A E F+ + VS+ MI +Q+ REAL + +M GV + T S ++
Sbjct: 209 GIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLT 268
Query: 164 SSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVS 223
+ L + + LH VI+ + +++ L+ +Y C S EA+
Sbjct: 269 ACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAK------------- 315
Query: 224 WNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGI 283
+F + ++ VSW +I G LQ E S+++ ++ M + +
Sbjct: 316 ------------------RVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELM 357
Query: 284 APNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARL 343
A + + LIS C M G Q+HS+ +K+G + + ++I YA CG + A
Sbjct: 358 AIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEF 417
Query: 344 QFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMA 403
F + I SW ++I + + G I AR+ F+ M R+ +W+AM+ Y Q+
Sbjct: 418 VFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDG 477
Query: 404 LELFHGMV-DAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIID 462
L+++ M+ V P+ +T V++F A G K G + + + LN +++ A I
Sbjct: 478 LKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVANAAIT 537
Query: 463 MYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNS 522
MY+KCG I+ A ++F + + V WNA+I G + HG K + D+ + K +
Sbjct: 538 MYSKCGRISEAQKLFDLLNGK--DVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDY 595
Query: 523 ITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIR 582
I+++ VLS C H+GLV G+ YF M V+ + P L+H+ CMVDLLGRAG L +A+++I
Sbjct: 596 ISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLID 655
Query: 583 SMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWED 642
MPMK +WG LL+A +IHGN E+ E AAK + L S +LL+ IY+DAG+ +D
Sbjct: 656 KMPMKPTAEVWGALLSACKIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDD 715
Query: 643 AFSIRKEMRDCGMKRLPGFS 662
+ +RK MRD G+K+ PG+S
Sbjct: 716 SAQVRKLMRDKGIKKNPGYS 735
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 153/630 (24%), Positives = 276/630 (43%), Gaps = 106/630 (16%)
Query: 25 ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS- 83
AL ALR C + A++ + +H + GL S F+QN+L++ Y CG +S A+ + +
Sbjct: 22 ALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRAD 81
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
+ + NIM++GY + L+DA E+FD+ P + S+ +++ +D R A
Sbjct: 82 IKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLM-----SDTSRPA---- 132
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECR----MLHGLVIKLMIDGFVIISTNLLNM 199
S +S G CR L GL K G + T L++M
Sbjct: 133 ---------------GSWMSC-----GALGCRELAPQLLGLFWKFDFWGDPDVETALVDM 172
Query: 200 YCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMI 259
+ C + A LF +++ I N ML G+AK ++ A E FE + +DVVSW MI
Sbjct: 173 FVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMI 232
Query: 260 DGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFD 319
Q R+ EAL + M G+ + ++AC R + G G Q+H+ ++++
Sbjct: 233 AALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQ 292
Query: 320 CYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNM 379
++ + +I YA CG ++A+++FN++
Sbjct: 293 IDPYVASALIELYAKCGS-------------------------------FKEAKRVFNSL 321
Query: 380 QKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGR 439
Q R+ SW+ +I G Q E + ++ELF+ M + ++ + ++ + L GR
Sbjct: 322 QDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGR 381
Query: 440 WAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDR---------------- 483
H L + +S ++I +YAKCG + A VF + +R
Sbjct: 382 QLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIG 441
Query: 484 -------------TTSVSPWNAIICGLAMHGDANLTLKIYSD-LEKRNIKLNSITFIGVL 529
T + WNA++ HG LK+YS L ++++ + +T++ +
Sbjct: 442 NIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLF 501
Query: 530 STCCHAGLVDLGERYF-KSMKS--VYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPM 586
C G LG++ ++K+ + NV + + + G++ +A+++ +
Sbjct: 502 RGCADIGANKLGDQIIGHTVKAGLILNVSV----ANAAITMYSKCGRISEAQKLFDLLNG 557
Query: 587 KADVVIWGTLLAASRIHGNVEVGERAAKSL 616
K DVV W ++ HG +G++AAK+
Sbjct: 558 K-DVVSWNAMITGYSQHG---MGKQAAKTF 583
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 120/481 (24%), Positives = 225/481 (46%), Gaps = 65/481 (13%)
Query: 27 VSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCST 86
S+L C+ ++ G+Q+H+ + +S + + ++ ++LI LYAKCG +AK +F+S
Sbjct: 264 TSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQD 323
Query: 87 LDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDM 146
+ V+ ++I G + Q +C+ +++E+F M
Sbjct: 324 RNSVSWTVLIGGSL-------------------------------QYECFSKSVELFNQM 352
Query: 147 RILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSL 206
R + ++ LA++IS + + R LH L +K + +++S +L+++Y C L
Sbjct: 353 RAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGDL 412
Query: 207 VEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVE 266
A +F M ER+IVSW M+ +++ G + ARE F+ + +++ ++W M+ Y+Q
Sbjct: 413 QNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQHG 472
Query: 267 RLSEALTMYRAMLCD-GIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQ 325
+ L MY AML + P+ V V L C A G QI VKAG +
Sbjct: 473 AEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSVA 532
Query: 326 ATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVY 385
I Y+ CGRI+ A+ F+L + SWNA+I G+ ++GM + A + F++
Sbjct: 533 NAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDD------- 585
Query: 386 SWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYV 445
M+ G KP+ I+ V+V + SG ++EG+ + +
Sbjct: 586 ------------------------MLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMM 621
Query: 446 LN-NSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDAN 504
+ I+ + ++D+ + G + A ++ + + T+ W A++ +HG+
Sbjct: 622 TRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTA-EVWGALLSACKIHGNDE 680
Query: 505 L 505
L
Sbjct: 681 L 681
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 123/460 (26%), Positives = 227/460 (49%), Gaps = 34/460 (7%)
Query: 151 VIPNEVT--LASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVE 208
++P+ VT LA + S G + R LHG ++ + + V + LL+ Y C +L +
Sbjct: 14 LLPHAVTQALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSD 73
Query: 209 ARSLFD-EMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVER 267
AR L ++KE N+++ N+M+NG+AK G + A ELF+R+P +DV SW T++ R
Sbjct: 74 ARRLLRADIKEPNVITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMS---DTSR 130
Query: 268 LSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQAT 327
+ + A+ C +AP Q+ + K F ++
Sbjct: 131 PAGSWMSCGALGCRELAP----------------------QLLGLFWKFDFWGDPDVETA 168
Query: 328 IIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSW 387
++ + CG ++ A F + I N+++AG+ + I+ A + F +M +RDV SW
Sbjct: 169 LVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSW 228
Query: 388 SAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLN 447
+ MI+ +Q+ + AL L M GV+ + T S A A +L G+ H V+
Sbjct: 229 NMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIR 288
Query: 448 NSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTL 507
+ ++ +++A+I++YAKCGS A VF ++DR SVS W +I G + + ++
Sbjct: 289 SLPQIDPYVASALIELYAKCGSFKEAKRVFNSLQDR-NSVS-WTVLIGGSLQYECFSKSV 346
Query: 508 KIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFK-SMKSVYNVEPDLKHYGCMVD 566
++++ + + ++ ++S C + + LG + +KS +N + + ++
Sbjct: 347 ELFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSN--SLIS 404
Query: 567 LLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNV 606
L + G L++AE V SM + D+V W +++ A GN+
Sbjct: 405 LYAKCGDLQNAEFVFSSMSER-DIVSWTSMITAYSQIGNI 443
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 105/396 (26%), Positives = 182/396 (45%), Gaps = 24/396 (6%)
Query: 9 VFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLY 68
+FN +A L D + AL + + C + + G+Q+HSL KSG + NSLI+LY
Sbjct: 348 LFNQMRAELMAID-QFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLY 406
Query: 69 AKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIM 128
AKCG + A+ +F S S D V+ MI+ Y + + ARE FD + +++ +M+
Sbjct: 407 AKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMATRNAITWNAMLG 466
Query: 129 GFAQNDCWREALEVFRDM-RILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMID 187
+ Q+ + L+++ M V P+ VT ++ +G + G +K +
Sbjct: 467 AYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLI 526
Query: 188 GFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERI 247
V ++ + MY C + EA+ LFD + +++VSWN M+ G+++ G+ + A + F+ +
Sbjct: 527 LNVSVANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDM 586
Query: 248 PSK----DVVSWGTMIDGYLQVERLSEALTMYRAML-CDGIAPNDVMIVDLISACGRAMA 302
SK D +S+ ++ G + E + M GI+P ++ GRA
Sbjct: 587 LSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGH 646
Query: 303 FGEGLQ-IHSIIVKAGFDCYD-FIQATIIHFYAACGRINLARLQ----FELGIKDHIASW 356
E I + +K + + + A IH G LA L FEL D S+
Sbjct: 647 LTEAKDLIDKMPMKPTAEVWGALLSACKIH-----GNDELAELAAKHVFELDSPDS-GSY 700
Query: 357 NALIAGFIRNGMIEDARQLFNNMQKRDV-----YSW 387
L + G +D+ Q+ M+ + + YSW
Sbjct: 701 MLLAKIYSDAGKSDDSAQVRKLMRDKGIKKNPGYSW 736
>gi|15223802|ref|NP_173449.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806503|sp|Q9LNU6.2|PPR53_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g20230
gi|332191832|gb|AEE29953.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 760
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 187/581 (32%), Positives = 312/581 (53%), Gaps = 20/581 (3%)
Query: 95 MISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPN 154
+I+ Y + NDA V P S++S+I + + +++ VF M G+IP+
Sbjct: 56 LIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPD 115
Query: 155 EVTLASVISSSVHLGGIWECRMLH--GLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSL 212
L ++ L + +H V L +D FV ++ +MY C + +AR +
Sbjct: 116 SHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFV--QGSMFHMYMRCGRMGDARKV 173
Query: 213 FDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSK----DVVSWGTMIDGYLQVERL 268
FD M ++++V+ + +L +A+ G +E + + S ++VSW ++ G+ +
Sbjct: 174 FDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYH 233
Query: 269 SEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATI 328
EA+ M++ + G P+ V + ++ + G + G IH ++K G + + +
Sbjct: 234 KEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAM 293
Query: 329 IHFYAACGRI-NLARL--QFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKR--- 382
I Y G + + L QFE+ NA I G RNG+++ A ++F +++
Sbjct: 294 IDMYGKSGHVYGIISLFNQFEMM---EAGVCNAYITGLSRNGLVDKALEMFELFKEQTME 350
Query: 383 -DVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWA 441
+V SW+++I+G AQN + ALELF M AGVKPN +T+ S+ A + L GR
Sbjct: 351 LNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRST 410
Query: 442 HEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHG 501
H + + + N ++ +A+IDMYAKCG IN + VF + T ++ WN+++ G +MHG
Sbjct: 411 HGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMP--TKNLVCWNSLMNGFSMHG 468
Query: 502 DANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHY 561
A + I+ L + +K + I+F +LS C GL D G +YFK M Y ++P L+HY
Sbjct: 469 KAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHY 528
Query: 562 GCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQP 621
CMV+LLGRAG+L++A ++I+ MP + D +WG LL + R+ NV++ E AA+ L L+P
Sbjct: 529 SCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEP 588
Query: 622 SHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
+ + VLLSNIYA G W + SIR +M G+K+ PG S
Sbjct: 589 ENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCS 629
Score = 178 bits (452), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 121/427 (28%), Positives = 217/427 (50%), Gaps = 17/427 (3%)
Query: 26 LVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCS 85
L + + C+ A G+QIH + SGL+ + F+Q S+ ++Y +CG + A+ +FD S
Sbjct: 119 LPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMS 178
Query: 86 TLDPVACNIMISGYIRNDRLNDAREVF---DKTPIKC-CVSYTSMIMGFAQNDCWREALE 141
D V C+ ++ Y R L + + + + I+ VS+ ++ GF ++ +EA+
Sbjct: 179 DKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVV 238
Query: 142 VFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIK--LMIDGFVIISTNLLNM 199
+F+ + LG P++VT++SV+ S + R++HG VIK L+ D VI + +++M
Sbjct: 239 MFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVI--SAMIDM 296
Query: 200 YCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSK----DVVSW 255
Y + SLF++ + N + G ++ GLV+ A E+FE + +VVSW
Sbjct: 297 YGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSW 356
Query: 256 GTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVK 315
++I G Q + EAL ++R M G+ PN V I ++ ACG A G G H V+
Sbjct: 357 TSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVR 416
Query: 316 AGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQL 375
+ + +I YA CGRINL+++ F + ++ WN+L+ GF +G ++ +
Sbjct: 417 VHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSI 476
Query: 376 FNNMQ----KRDVYSWSAMISGYAQNEQPNMALELFHGMVDA-GVKPNEITMVSVFCAIA 430
F ++ K D S+++++S Q + + F M + G+KP + +
Sbjct: 477 FESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLG 536
Query: 431 SSGTLKE 437
+G L+E
Sbjct: 537 RAGKLQE 543
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 99/245 (40%), Gaps = 47/245 (19%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+ + S L C A+ G+ H + L N + ++LI++YAKCG
Sbjct: 389 VTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCG----------- 437
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
R+N ++ VF+ P K V + S++ GF+ + +E + +F
Sbjct: 438 --------------------RINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIF 477
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGI---WECRMLHGLVIKLMIDGFVIIS-----TN 195
+ + P+ ++ S++S+ +G W+ K+M + + I +
Sbjct: 478 ESLMRTRLKPDFISFTSLLSACGQVGLTDEGWK-------YFKMMSEEYGIKPRLEHYSC 530
Query: 196 LLNMYCVCSSLVEARSLFDEMK-ERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVS 254
++N+ L EA L EM E + W +LN V+LA E++ + +
Sbjct: 531 MVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPEN 590
Query: 255 WGTMI 259
GT +
Sbjct: 591 PGTYV 595
>gi|297844988|ref|XP_002890375.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336217|gb|EFH66634.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 760
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 183/577 (31%), Positives = 312/577 (54%), Gaps = 12/577 (2%)
Query: 95 MISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPN 154
+I+ Y + NDA + P S++S+I + + +++ VF M G+IP+
Sbjct: 56 LIASYSNYNCFNDADLILQSIPDPTVYSFSSLIYALTKAKLFSQSIGVFSRMFSHGLIPD 115
Query: 155 EVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFD 214
L ++ L + +H + +D + +L +MY C + +AR +FD
Sbjct: 116 THVLPNLFKVCAELSAFKAGKQIHCVACVSGLDMDAFVQGSLFHMYMRCGRMGDARKVFD 175
Query: 215 EMKERNIVSWNVMLNGFAKAG-LVELARELFERIPS---KDVVSWGTMIDGYLQVERLSE 270
M E+++V+ + +L G+A+ G L E+ R L E S ++VSW ++ G+ + E
Sbjct: 176 RMSEKDVVTCSALLCGYARKGCLEEVVRILSEMEKSGIEPNIVSWNGILSGFNRSGYHKE 235
Query: 271 ALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIH 330
A+ M++ M G P+ V + ++ + G + G QIH ++K G + + ++
Sbjct: 236 AVIMFQKMHHLGFCPDQVTVSSVLPSVGDSENLNMGRQIHGYVIKQGLLKDKCVISAMLD 295
Query: 331 FYAACGRI-NLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKR----DVY 385
Y G + + +L E + + NA I G RNG+++ A ++F +++ +V
Sbjct: 296 MYGKSGHVYGIIKLFDEFEMME-TGVCNAYITGLSRNGLVDKALEMFGLFKEQKMELNVV 354
Query: 386 SWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYV 445
SW+++I+G AQN + ALELF M AGVKPN +T+ S+ A + L GR H +
Sbjct: 355 SWTSIIAGCAQNGKDIEALELFREMQVAGVKPNRVTIPSMLPACGNIAALGHGRSTHGFA 414
Query: 446 LNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANL 505
+ + + ++ +A+IDMYAKCG I + VF + T ++ WN+++ G +MHG A
Sbjct: 415 VRVHLLDDVHVGSALIDMYAKCGRIKMSQIVFNMMP--TKNLVCWNSLMNGYSMHGKAKE 472
Query: 506 TLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMV 565
+ I+ L + +K + I+F +LS C GL D G +YF M Y ++P L+HY CMV
Sbjct: 473 VMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFNMMSEEYGIKPRLEHYSCMV 532
Query: 566 DLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGP 625
+LLGRAG+L++A ++I+ +P + D +WG LL + R+ NV++ E AA+ L L+P +
Sbjct: 533 NLLGRAGKLQEAYDLIKEIPFEPDSCVWGALLNSCRLQNNVDLAEIAAQKLFHLEPENPG 592
Query: 626 SRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
+ VL+SNIYA G W + SIR +M G+K+ PG S
Sbjct: 593 TYVLMSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCS 629
Score = 182 bits (462), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 124/427 (29%), Positives = 217/427 (50%), Gaps = 17/427 (3%)
Query: 26 LVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCS 85
L + + C+ A G+QIH + SGL+ + F+Q SL ++Y +CG + A+ +FD S
Sbjct: 119 LPNLFKVCAELSAFKAGKQIHCVACVSGLDMDAFVQGSLFHMYMRCGRMGDARKVFDRMS 178
Query: 86 TLDPVACNIMISGYIRNDRLNDAREVF---DKTPIKC-CVSYTSMIMGFAQNDCWREALE 141
D V C+ ++ GY R L + + +K+ I+ VS+ ++ GF ++ +EA+
Sbjct: 179 EKDVVTCSALLCGYARKGCLEEVVRILSEMEKSGIEPNIVSWNGILSGFNRSGYHKEAVI 238
Query: 142 VFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIK--LMIDGFVIISTNLLNM 199
+F+ M LG P++VT++SV+ S + R +HG VIK L+ D VI + +L+M
Sbjct: 239 MFQKMHHLGFCPDQVTVSSVLPSVGDSENLNMGRQIHGYVIKQGLLKDKCVI--SAMLDM 296
Query: 200 YCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELF----ERIPSKDVVSW 255
Y + LFDE + N + G ++ GLV+ A E+F E+ +VVSW
Sbjct: 297 YGKSGHVYGIIKLFDEFEMMETGVCNAYITGLSRNGLVDKALEMFGLFKEQKMELNVVSW 356
Query: 256 GTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVK 315
++I G Q + EAL ++R M G+ PN V I ++ ACG A G G H V+
Sbjct: 357 TSIIAGCAQNGKDIEALELFREMQVAGVKPNRVTIPSMLPACGNIAALGHGRSTHGFAVR 416
Query: 316 AGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQL 375
+ + +I YA CGRI ++++ F + ++ WN+L+ G+ +G ++ +
Sbjct: 417 VHLLDDVHVGSALIDMYAKCGRIKMSQIVFNMMPTKNLVCWNSLMNGYSMHGKAKEVMSI 476
Query: 376 FNNMQ----KRDVYSWSAMISGYAQNEQPNMALELFHGMVDA-GVKPNEITMVSVFCAIA 430
F ++ K D S+++++S Q + + F+ M + G+KP + +
Sbjct: 477 FESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFNMMSEEYGIKPRLEHYSCMVNLLG 536
Query: 431 SSGTLKE 437
+G L+E
Sbjct: 537 RAGKLQE 543
Score = 46.2 bits (108), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 62/127 (48%), Gaps = 4/127 (3%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+ + S L C A+ G+ H + L + + ++LI++YAKCG I ++ +F+
Sbjct: 389 VTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDDVHVGSALIDMYAKCGRIKMSQIVFNM 448
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFD---KTPIKC-CVSYTSMIMGFAQNDCWREA 139
T + V N +++GY + + + +F+ +T +K +S+TS++ Q E
Sbjct: 449 MPTKNLVCWNSLMNGYSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEG 508
Query: 140 LEVFRDM 146
+ F M
Sbjct: 509 WKYFNMM 515
>gi|356507248|ref|XP_003522381.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Glycine max]
Length = 635
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 169/476 (35%), Positives = 273/476 (57%), Gaps = 11/476 (2%)
Query: 190 VIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAK-AGLVELARELFERIP 248
VI S L+ Y C + A +F++MK ++ V+WN +L FAK G E AR+LFE+IP
Sbjct: 41 VIASNKLIASYVRCGDIDSAVRVFEDMKVKSTVTWNSILAAFAKKPGHFEYARQLFEKIP 100
Query: 249 SKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQ 308
+ VS+ M+ + + +A + +M +A + MI SA + GE +
Sbjct: 101 QPNTVSYNIMLACHWHHLGVHDARGFFDSMPLKDVASWNTMI----SALAQVGLMGEARR 156
Query: 309 IHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGM 368
+ S + + +C + + ++ Y ACG ++ A F + +W A+I G+++ G
Sbjct: 157 LFSAMPEK--NCVSW--SAMVSGYVACGDLDAAVECFYAAPMRSVITWTAMITGYMKFGR 212
Query: 369 IEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCA 428
+E A +LF M R + +W+AMI+GY +N + L LF M++ GVKPN +++ SV
Sbjct: 213 VELAERLFQEMSMRTLVTWNAMIAGYVENGRAEDGLRLFRTMLETGVKPNALSLTSVLLG 272
Query: 429 IASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVS 488
++ L+ G+ H+ V ++ + +++ MY+KCG + A+E+F I + V
Sbjct: 273 CSNLSALQLGKQVHQLVCKCPLSSDTTAGTSLVSMYSKCGDLKDAWELFIQIPRK--DVV 330
Query: 489 PWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSM 548
WNA+I G A HG L+++ +++K +K + ITF+ VL C HAGLVDLG +YF +M
Sbjct: 331 CWNAMISGYAQHGAGKKALRLFDEMKKEGLKPDWITFVAVLLACNHAGLVDLGVQYFNTM 390
Query: 549 KSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEV 608
+ + +E +HY CMVDLLGRAG+L +A ++I+SMP K I+GTLL A RIH N+ +
Sbjct: 391 RRDFGIETKPEHYACMVDLLGRAGKLSEAVDLIKSMPFKPHPAIYGTLLGACRIHKNLNL 450
Query: 609 GERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
E AAK+L L P+ V L+N+YA RW+ SIR+ M+D + ++PG+S +
Sbjct: 451 AEFAAKNLLELDPTIATGYVQLANVYAAQNRWDHVASIRRSMKDNNVVKIPGYSWI 506
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 93/416 (22%), Positives = 179/416 (43%), Gaps = 64/416 (15%)
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWRE-ALEVFRDMRI 148
+A N +I+ Y+R ++ A VF+ +K V++ S++ FA+ E A ++F +
Sbjct: 42 IASNKLIASYVRCGDIDSAVRVFEDMKVKSTVTWNSILAAFAKKPGHFEYARQLFEKIPQ 101
Query: 149 LGVIPNEVTLA---------------------------SVISSSVHLGGIWECRMLHGLV 181
+ + LA ++IS+ +G + E R L
Sbjct: 102 PNTVSYNIMLACHWHHLGVHDARGFFDSMPLKDVASWNTMISALAQVGLMGEARRL---- 157
Query: 182 IKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELAR 241
M + + + +++ Y C L A F R++++W M+ G+ K G VELA
Sbjct: 158 FSAMPEKNCVSWSAMVSGYVACGDLDAAVECFYAAPMRSVITWTAMITGYMKFGRVELAE 217
Query: 242 ELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAM 301
LF+ + + +V+W MI GY++ R + L ++R ML G+ PN + + ++ C
Sbjct: 218 RLFQEMSMRTLVTWNAMIAGYVENGRAEDGLRLFRTMLETGVKPNALSLTSVLLGCSNLS 277
Query: 302 AFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIA 361
A G Q+H ++ K +++ Y+ CG + A F + + WNA+I+
Sbjct: 278 ALQLGKQVHQLVCKCPLSSDTTAGTSLVSMYSKCGDLKDAWELFIQIPRKDVVCWNAMIS 337
Query: 362 GFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEIT 421
G+ ++G + A +LF+ M+K G+KP+ IT
Sbjct: 338 GYAQHGAGKKALRLFDEMKKE-------------------------------GLKPDWIT 366
Query: 422 MVSVFCAIASSGTLKEG-RWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEV 476
V+V A +G + G ++ + + I A ++D+ + G ++ A ++
Sbjct: 367 FVAVLLACNHAGLVDLGVQYFNTMRRDFGIETKPEHYACMVDLLGRAGKLSEAVDL 422
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 90/387 (23%), Positives = 170/387 (43%), Gaps = 41/387 (10%)
Query: 49 IFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDA 108
+F + E N +++++ Y CG + A F + + MI+GY++ R+ A
Sbjct: 157 LFSAMPEKNCVSWSAMVSGYVACGDLDAAVECFYAAPMRSVITWTAMITGYMKFGRVELA 216
Query: 109 REVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHL 168
+F + ++ V++ +MI G+ +N + L +FR M GV PN ++L SV+ +L
Sbjct: 217 ERLFQEMSMRTLVTWNAMIAGYVENGRAEDGLRLFRTMLETGVKPNALSLTSVLLGCSNL 276
Query: 169 GGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVML 228
+ + +H LV K + T+L++MY C L +A LF ++ +++V WN M+
Sbjct: 277 SALQLGKQVHQLVCKCPLSSDTTAGTSLVSMYSKCGDLKDAWELFIQIPRKDVVCWNAMI 336
Query: 229 NGFAKAGLVELARELFERIPSKDV-VSWGTMIDGYLQVER-------LSEALTMYRAMLC 280
+G+A+ G + A LF+ + + + W T + L + TM R
Sbjct: 337 SGYAQHGAGKKALRLFDEMKKEGLKPDWITFVAVLLACNHAGLVDLGVQYFNTMRRDFGI 396
Query: 281 DGIAPNDVMIVDLISACG---------RAMAFGEGLQIHSIIVKA-----GFDCYDFIQA 326
+ + +VDL+ G ++M F I+ ++ A + +F
Sbjct: 397 ETKPEHYACMVDLLGRAGKLSEAVDLIKSMPFKPHPAIYGTLLGACRIHKNLNLAEFAAK 456
Query: 327 TIIHF--YAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDV 384
++ A G + LA + DH+AS IR M + NN+ K
Sbjct: 457 NLLELDPTIATGYVQLANVYAAQNRWDHVAS--------IRRSMKD------NNVVKIPG 502
Query: 385 YSW---SAMISGYAQNEQPNMALELFH 408
YSW ++++ G+ +++ + L H
Sbjct: 503 YSWIEINSVVHGFRSSDRLHPELASIH 529
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/341 (21%), Positives = 144/341 (42%), Gaps = 74/341 (21%)
Query: 344 QFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQN------ 397
Q E + IAS N LIA ++R G I+ A ++F +M+ + +W+++++ +A+
Sbjct: 33 QHEFNNNNVIAS-NKLIASYVRCGDIDSAVRVFEDMKVKSTVTWNSILAAFAKKPGHFEY 91
Query: 398 --------EQPN-------MALELFH-------GMVDAGVKPNEITMVSVFCAIASSGTL 435
QPN +A H G D+ + + ++ A+A G +
Sbjct: 92 ARQLFEKIPQPNTVSYNIMLACHWHHLGVHDARGFFDSMPLKDVASWNTMISALAQVGLM 151
Query: 436 KEGRWAHEYVLNNSITLNDNLS-AAIIDMYAKCGSINTAFEVFYHIRDRTT--------- 485
E R L +++ + +S +A++ Y CG ++ A E FY R+
Sbjct: 152 GEAR-----RLFSAMPEKNCVSWSAMVSGYVACGDLDAAVECFYAAPMRSVITWTAMITG 206
Query: 486 --------------------SVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITF 525
++ WNA+I G +G A L+++ + + +K N+++
Sbjct: 207 YMKFGRVELAERLFQEMSMRTLVTWNAMIAGYVENGRAEDGLRLFRTMLETGVKPNALSL 266
Query: 526 IGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMP 585
VL C + + LG++ + + + D +V + + G L+DA E+ +P
Sbjct: 267 TSVLLGCSNLSALQLGKQVHQ-LVCKCPLSSDTTAGTSLVSMYSKCGDLKDAWELFIQIP 325
Query: 586 MKADVVIWGTLLAASRIHGNVEVGERAAKSL-----AGLQP 621
K DVV W +++ HG G++A + GL+P
Sbjct: 326 RK-DVVCWNAMISGYAQHG---AGKKALRLFDEMKKEGLKP 362
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 67/146 (45%), Gaps = 31/146 (21%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
L+L S L CS A+ G+Q+H L+ K L S+T SL+++Y+KCG + A +F
Sbjct: 264 LSLTSVLLGCSNLSALQLGKQVHQLVCKCPLSSDTTAGTSLVSMYSKCGDLKDAWELFIQ 323
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
D V N MISGY AQ+ ++AL +F
Sbjct: 324 IPRKDVVCWNAMISGY-------------------------------AQHGAGKKALRLF 352
Query: 144 RDMRILGVIPNEVTLASVISSSVHLG 169
+M+ G+ P+ +T +V+ + H G
Sbjct: 353 DEMKKEGLKPDWITFVAVLLACNHAG 378
>gi|225424928|ref|XP_002270695.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02750
[Vitis vinifera]
gi|296086418|emb|CBI32007.3| unnamed protein product [Vitis vinifera]
Length = 617
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 196/632 (31%), Positives = 321/632 (50%), Gaps = 76/632 (12%)
Query: 41 QGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYI 100
QGQ +H+ + K+G + + +L ++Y K L+S A
Sbjct: 51 QGQILHTQLIKTGFHLDIYAATALADMYMKLHLLSYA----------------------- 87
Query: 101 RNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLAS 160
+VF++ P + S I GF++N +REAL F+ + + PN VT+AS
Sbjct: 88 --------LKVFEEMPHRNLPSLNVTISGFSRNGYFREALGAFKQVGLGNFRPNSVTIAS 139
Query: 161 VISS--SVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKE 218
V+ + SV L G +H L IKL ++ + ++T ++ MY C LV
Sbjct: 140 VLPACASVELDG-----QVHCLAIKLGVESDIYVATAVVTMYSNCGELV----------- 183
Query: 219 RNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAM 278
LA+++F++I K+VVS+ I G LQ +++ +
Sbjct: 184 --------------------LAKKVFDQILDKNVVSYNAFISGLLQNGAPHLVFDVFKDL 223
Query: 279 L-CDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGR 337
L G PN V +V ++SAC + + G QIH ++VK + + ++ Y+ CG
Sbjct: 224 LESSGEVPNSVTLVSILSACSKLLYIRFGRQIHGLVVKIEINFDTMVGTALVDMYSKCGC 283
Query: 338 INLARLQF-ELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKR----DVYSWSAMIS 392
+ A F EL ++ +WN++IAG + NG + A +LF ++ D +W+ MIS
Sbjct: 284 WHWAYGIFIELSGSRNLVTWNSMIAGMMLNGQSDIAVELFEQLEPEGLEPDSATWNTMIS 343
Query: 393 GYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITL 452
G++Q Q A + FH M AGV + ++ S+ A ++ L+ G+ H + + +I
Sbjct: 344 GFSQQGQVVEAFKFFHKMQSAGVIASLKSITSLLRACSALSALQSGKEIHGHTIRTNIDT 403
Query: 453 NDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSD 512
++ +S A+IDMY KCG A VF + + + WNA+I G +G +I++
Sbjct: 404 DEFISTALIDMYMKCGHSYLARRVFCQFQIKPDDPAFWNAMISGYGRNGKYQSAFEIFNQ 463
Query: 513 LEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAG 572
+++ ++ NS T + +LS C H G +D G + FK M Y + P +H+GCMVDLLGR+G
Sbjct: 464 MQEEKVQPNSATLVSILSVCSHTGEIDRGWQLFKMMNRDYGLNPTSEHFGCMVDLLGRSG 523
Query: 573 QLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSN 632
+L++A+E+I MP +A V ++ +LL A R H + +GE AK L+ L+P V+LSN
Sbjct: 524 RLKEAQELIHEMP-EASVSVFASLLGACRHHSDSALGEEMAKKLSELEPQDPTPFVILSN 582
Query: 633 IYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
IYA GRW D +R+ M D G+K+ PG S +
Sbjct: 583 IYAVQGRWGDVERVREMMNDRGLKKPPGCSSI 614
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 141/507 (27%), Positives = 231/507 (45%), Gaps = 81/507 (15%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+ + S L C++ V Q+H L K G+ES+ ++ +++ +Y+ CG + AK +FD
Sbjct: 135 VTIASVLPACAS---VELDGQVHCLAIKLGVESDIYVATAVVTMYSNCGELVLAKKVFD- 190
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
++ DK VSY + I G QN +VF
Sbjct: 191 --------------------------QILDKN----VVSYNAFISGLLQNGAPHLVFDVF 220
Query: 144 RD-MRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
+D + G +PN VTL S++S+ L I R +HGLV+K+ I+ ++ T L++MY
Sbjct: 221 KDLLESSGEVPNSVTLVSILSACSKLLYIRFGRQIHGLVVKIEINFDTMVGTALVDMYSK 280
Query: 203 CSSLVEARSLFDEMK-ERNIVSWNVMLNGFAKAGLVELARELFERIPSK----DVVSWGT 257
C A +F E+ RN+V+WN M+ G G ++A ELFE++ + D +W T
Sbjct: 281 CGCWHWAYGIFIELSGSRNLVTWNSMIAGMMLNGQSDIAVELFEQLEPEGLEPDSATWNT 340
Query: 258 MIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAG 317
MI G+ Q ++ EA + M G+ + I L+ AC A G +IH ++
Sbjct: 341 MISGFSQQGQVVEAFKFFHKMQSAGVIASLKSITSLLRACSALSALQSGKEIHGHTIRTN 400
Query: 318 FDCYDFIQATIIHFYAACGRINLARLQF-ELGIK-DHIASWNALIAGFIRNGMIEDARQL 375
D +FI +I Y CG LAR F + IK D A WNA+I+G+ RNG + A ++
Sbjct: 401 IDTDEFISTALIDMYMKCGHSYLARRVFCQFQIKPDDPAFWNAMISGYGRNGKYQSAFEI 460
Query: 376 FNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTL 435
FN MQ+ V+PN T+VS+ + +G +
Sbjct: 461 FNQMQEEK-------------------------------VQPNSATLVSILSVCSHTGEI 489
Query: 436 KEGRWAHEYVLNNSITLNDNLS--AAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAI 493
G W ++N LN ++D+ + G + A E+ + + + SVS + ++
Sbjct: 490 DRG-WQLFKMMNRDYGLNPTSEHFGCMVDLLGRSGRLKEAQELIHEMPE--ASVSVFASL 546
Query: 494 ICGLAMHGDANL---TLKIYSDLEKRN 517
+ H D+ L K S+LE ++
Sbjct: 547 LGACRHHSDSALGEEMAKKLSELEPQD 573
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 98/425 (23%), Positives = 194/425 (45%), Gaps = 67/425 (15%)
Query: 127 IMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMI 186
I N +REAL ++ + V+ ++ T ++ +S L + ++LH +IK
Sbjct: 5 IAKLVSNGFYREALSLYSKLHSSSVLEHKFTFPFLLKASAKLNSPLQGQILHTQLIKTGF 64
Query: 187 DGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFER 246
+ +T L +MY L A +F+EM RN+ S NV ++GF++
Sbjct: 65 HLDIYAATALADMYMKLHLLSYALKVFEEMPHRNLPSLNVTISGFSR------------- 111
Query: 247 IPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEG 306
+GY + EAL ++ + PN V I ++ AC G
Sbjct: 112 -------------NGYFR-----EALGAFKQVGLGNFRPNSVTIASVLPACASVELDG-- 151
Query: 307 LQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRN 366
Q+H + +K G + ++ ++ Y+ CG + LA+ F+ + ++ S+NA I+G ++N
Sbjct: 152 -QVHCLAIKLGVESDIYVATAVVTMYSNCGELVLAKKVFDQILDKNVVSYNAFISGLLQN 210
Query: 367 GMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVD-AGVKPNEITMVSV 425
G P++ ++F +++ +G PN +T+VS+
Sbjct: 211 G-------------------------------APHLVFDVFKDLLESSGEVPNSVTLVSI 239
Query: 426 FCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTT 485
A + ++ GR H V+ I + + A++DMY+KCG + A+ +F +
Sbjct: 240 LSACSKLLYIRFGRQIHGLVVKIEINFDTMVGTALVDMYSKCGCWHWAYGIFIELSGSRN 299
Query: 486 SVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYF 545
V+ WN++I G+ ++G +++ ++++ LE ++ +S T+ ++S G V ++F
Sbjct: 300 LVT-WNSMIAGMMLNGQSDIAVELFEQLEPEGLEPDSATWNTMISGFSQQGQVVEAFKFF 358
Query: 546 KSMKS 550
M+S
Sbjct: 359 HKMQS 363
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 152/311 (48%), Gaps = 18/311 (5%)
Query: 7 HSVFNSQKANLQNS---DYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNS 63
H VF+ K L++S + LVS L CS + + G+QIH L+ K + +T + +
Sbjct: 214 HLVFDVFKDLLESSGEVPNSVTLVSILSACSKLLYIRFGRQIHGLVVKIEINFDTMVGTA 273
Query: 64 LINLYAKCGLISQAKSMFDSCS-TLDPVACNIMISGYIRNDRLNDAREVFDKTPIKC--- 119
L+++Y+KCG A +F S + + V N MI+G + N + + A E+F++ +
Sbjct: 274 LVDMYSKCGCWHWAYGIFIELSGSRNLVTWNSMIAGMMLNGQSDIAVELFEQLEPEGLEP 333
Query: 120 -CVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLH 178
++ +MI GF+Q EA + F M+ GVI + ++ S++ + L + + +H
Sbjct: 334 DSATWNTMISGFSQQGQVVEAFKFFHKMQSAGVIASLKSITSLLRACSALSALQSGKEIH 393
Query: 179 GLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLF--DEMKERNIVSWNVMLNGFAKAGL 236
G I+ ID IST L++MY C AR +F ++K + WN M++G+ + G
Sbjct: 394 GHTIRTNIDTDEFISTALIDMYMKCGHSYLARRVFCQFQIKPDDPAFWNAMISGYGRNGK 453
Query: 237 VELARELFERIPSKDVVSWGTMIDGYLQV----ERLSEALTMYRAMLCD-GIAPNDVM-- 289
+ A E+F ++ + V + L V + +++ M D G+ P
Sbjct: 454 YQSAFEIFNQMQEEKVQPNSATLVSILSVCSHTGEIDRGWQLFKMMNRDYGLNPTSEHFG 513
Query: 290 -IVDLISACGR 299
+VDL+ GR
Sbjct: 514 CMVDLLGRSGR 524
Score = 43.5 bits (101), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 86/197 (43%), Gaps = 7/197 (3%)
Query: 403 ALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIID 462
AL L+ + + V ++ T + A A + +G+ H ++ L+ + A+ D
Sbjct: 17 ALSLYSKLHSSSVLEHKFTFPFLLKASAKLNSPLQGQILHTQLIKTGFHLDIYAATALAD 76
Query: 463 MYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNS 522
MY K ++ A +VF + R ++ N I G + +G L + + N + NS
Sbjct: 77 MYMKLHLLSYALKVFEEMPHR--NLPSLNVTISGFSRNGYFREALGAFKQVGLGNFRPNS 134
Query: 523 ITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIR 582
+T VL C L G+ + ++K VE D+ +V + G+L A++V
Sbjct: 135 VTIASVLPACASVELD--GQVHCLAIK--LGVESDIYVATAVVTMYSNCGELVLAKKVFD 190
Query: 583 SMPMKADVVIWGTLLAA 599
+ + +VV + ++
Sbjct: 191 QI-LDKNVVSYNAFISG 206
>gi|124360536|gb|ABN08546.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 1083
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 199/633 (31%), Positives = 313/633 (49%), Gaps = 97/633 (15%)
Query: 35 AHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNI 94
A +++ G+++H +FK G E + F+ SL++LY++ G+
Sbjct: 133 ACVSLVDGKKVHCCVFKMGFEDDVFVAASLVHLYSRYGV--------------------- 171
Query: 95 MISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPN 154
L+ A +VF P+K S+ +MI GF QN AL V M+ GV +
Sbjct: 172 ----------LDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMD 221
Query: 155 EVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFD 214
+T+AS++ + ++H V+K +D V +S L+NMY L +A+ +FD
Sbjct: 222 TITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFD 281
Query: 215 EMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTM 274
+M+ R++VSWN ++I Y Q S AL
Sbjct: 282 QMEVRDLVSWN-------------------------------SIIAAYEQNNDPSTALRF 310
Query: 275 YRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD-FIQATIIHFYA 333
++ M GI P+ + +V L S + I +++ + D I +++ YA
Sbjct: 311 FKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYA 370
Query: 334 ACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQK-RDVYSWSAMIS 392
G +N A F+ + SWN L+ G+ +NG+ +A +N M++ RD
Sbjct: 371 KLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTI------- 423
Query: 393 GYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITL 452
PN+ T VS+ A + G L++G H ++ NS+ L
Sbjct: 424 ------------------------PNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYL 459
Query: 453 NDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSD 512
+ ++ +ID+Y KCG + A +FY I R TSV PWNAII L +HG L+++ D
Sbjct: 460 DVFVATCLIDLYGKCGRLEDAMSLFYEI-PRDTSV-PWNAIIASLGIHGRGEEALQLFKD 517
Query: 513 LEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAG 572
+ +K + ITF+ +LS C H+GLVD G++ F M+ Y ++P LKHYGCMVDLLGRAG
Sbjct: 518 MLAERVKADHITFVSLLSACSHSGLVDEGQKCFDIMQKEYGIKPSLKHYGCMVDLLGRAG 577
Query: 573 QLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSN 632
LE A E++R+MP++ D IWG LL+A +I+GN E+G A+ L + + VLLSN
Sbjct: 578 YLEKAYELVRNMPIQPDASIWGALLSACKIYGNAELGTLASDRLLEVDSENVGYYVLLSN 637
Query: 633 IYADAGRWEDAFSIRKEMRDCGMKRLPGFSGVV 665
IYA+ +WE +R RD G+++ PG+S VV
Sbjct: 638 IYANTEKWEGVIKVRSLARDRGLRKTPGWSSVV 670
Score = 148 bits (374), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 134/575 (23%), Positives = 253/575 (44%), Gaps = 102/575 (17%)
Query: 37 IAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMI 96
+ V+ +++H+L+ G N + LINLY G IS ++S FD + + N +I
Sbjct: 33 VNVNATKKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSII 92
Query: 97 SGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEV 156
S Y+R + ++A + C SM G +R P+
Sbjct: 93 SAYVRFGKYHEA--------MNCVNQLFSMCGG--------------GHLR-----PDFY 125
Query: 157 TLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEM 216
T ++ + V L + + +H V K+ + V ++ +L+++Y L A +F +M
Sbjct: 126 TFPPILKACVSL---VDGKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDM 182
Query: 217 KERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYR 276
+++ SWN M++GF + G + AL +
Sbjct: 183 PVKDVGSWNAMISGFCQNG-------------------------------NAAGALGVLN 211
Query: 277 AMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACG 336
M +G+ + + + ++ C ++ G+ IH ++K G D F+ +I+ Y+ G
Sbjct: 212 RMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFG 271
Query: 337 RINLARLQF-ELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYA 395
R+ A++ F ++ ++D + SWN++IA Y
Sbjct: 272 RLQDAQMVFDQMEVRD-LVSWNSIIA-------------------------------AYE 299
Query: 396 QNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLND- 454
QN P+ AL F GM G++P+ +T+VS+ + + R +V+ D
Sbjct: 300 QNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDV 359
Query: 455 NLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLE 514
+ A+++MYAK G +N A VF + R ++S WN ++ G +G A+ + Y+ +E
Sbjct: 360 VIGNALVNMYAKLGYMNCAHTVFDQL-PRKDTIS-WNTLVTGYTQNGLASEAIDAYNMME 417
Query: 515 K-RNIKLNSITFIGVLSTCCHAGLVDLGER-YFKSMKSVYNVEPDLKHYGCMVDLLGRAG 572
+ R+ N T++ ++ H G + G + + K +K+ ++ D+ C++DL G+ G
Sbjct: 418 ECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKN--SLYLDVFVATCLIDLYGKCG 475
Query: 573 QLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVE 607
+LEDA + +P V W ++A+ IHG E
Sbjct: 476 RLEDAMSLFYEIPRDTSVP-WNAIIASLGIHGRGE 509
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 119/489 (24%), Positives = 201/489 (41%), Gaps = 105/489 (21%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+ + S L C+ V G IH + K GL+S+ F+ N+LIN+Y+K G + A+ +FD
Sbjct: 223 ITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQ 282
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
D V+ N S+I + QN+ AL F
Sbjct: 283 MEVRDLVSWN-------------------------------SIIAAYEQNNDPSTALRFF 311
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKL-MIDGFVIISTNLLNMYCV 202
+ M++ G+ P+ +T+ S+ S L R + G VI+ +D V+I L+NMY
Sbjct: 312 KGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAK 371
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
+ A ++FD++ ++ +SWN ++ G+ + GL A ID Y
Sbjct: 372 LGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEA------------------IDAY 413
Query: 263 LQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD 322
+E C PN V +I A A +G++IH+ ++K
Sbjct: 414 NMMEE------------CRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDV 461
Query: 323 FIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKR 382
F+ +I Y CGR+ A F +D WNA+IA +G E+A QLF +
Sbjct: 462 FVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEEALQLFKD---- 517
Query: 383 DVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAH 442
M+ VK + IT VS+ A + SG + EG+
Sbjct: 518 ---------------------------MLAERVKADHITFVSLLSACSHSGLVDEGQKCF 550
Query: 443 EYVLNNSITLNDNLS--AAIIDMYAKCGSINTAFEVFYHIRDRTTSVSP----WNAIICG 496
+ ++ + +L ++D+ + G + A+E+ R + P W A++
Sbjct: 551 D-IMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELV-----RNMPIQPDASIWGALLSA 604
Query: 497 LAMHGDANL 505
++G+A L
Sbjct: 605 CKIYGNAEL 613
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 146/302 (48%), Gaps = 19/302 (6%)
Query: 331 FYAACGRINLAR----LQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYS 386
+ +C +N + L G +I LI ++ +G I +R F+ + K++++S
Sbjct: 28 LFNSCVNVNATKKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFS 87
Query: 387 WSAMISGYAQ----NEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAH 442
W+++IS Y + +E N +LF ++P+ T + A S L +G+ H
Sbjct: 88 WNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVS---LVDGKKVH 144
Query: 443 EYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGD 502
V + ++A+++ +Y++ G ++ A +VF + V WNA+I G +G+
Sbjct: 145 CCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDM--PVKDVGSWNAMISGFCQNGN 202
Query: 503 ANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGER-YFKSMKSVYNVEPDLKHY 561
A L + + ++ +K+++IT +L C + V G + +K + ++ D+
Sbjct: 203 AAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLK--HGLDSDVFVS 260
Query: 562 GCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAK--SLAGL 619
++++ + G+L+DA+ V M ++ D+V W +++AA + + R K L G+
Sbjct: 261 NALINMYSKFGRLQDAQMVFDQMEVR-DLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGI 319
Query: 620 QP 621
+P
Sbjct: 320 RP 321
>gi|242084152|ref|XP_002442501.1| hypothetical protein SORBIDRAFT_08g020970 [Sorghum bicolor]
gi|241943194|gb|EES16339.1| hypothetical protein SORBIDRAFT_08g020970 [Sorghum bicolor]
Length = 701
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 200/650 (30%), Positives = 336/650 (51%), Gaps = 56/650 (8%)
Query: 49 IFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDA 108
+F N N++I + G ++ A+ +FD + D + +M+S Y R L A
Sbjct: 71 LFDGMPSRNAVSWNAMIAALSDHGRVADARGLFDRMPSRDDFSWTVMVSCYARAGELELA 130
Query: 109 REVFDKTP-IKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVH 167
R+V D+ P KC Y +MI G+A+N + +A+++ R+M + LA + S
Sbjct: 131 RDVLDRMPGDKCTACYNAMISGYAKNGRFDDAVKLLREMPAPDLFSWNSALAGLTQSGQM 190
Query: 168 LGGIWECRMLHGLVIKLMIDGFVIISTNL-LNMYCVCSSLVEARSLFDEMKERNIVSWNV 226
+ + + +V K M+ S NL L + L A S F ++ N+VSW
Sbjct: 191 VRAV---QFFDEMVEKDMV------SWNLMLEGFVRAGDLDAAASFFGRIESPNVVSWVT 241
Query: 227 MLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPN 286
+LNG+ +AG + AR+LF+R+P ++VV+ M+DGY+++ RL EA ++ M N
Sbjct: 242 LLNGYCRAGRISDARDLFDRMPERNVVACNVMLDGYVRLSRLEEACKLFDEM----PGKN 297
Query: 287 DVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFE 346
+ +IS RA G+ + ++ K F+C + ++H Y +N AR F+
Sbjct: 298 SISWTTIISGLARA---GKLQEAKDLLDKMSFNCVA-AKTALMHGYLQRNMVNDARQIFD 353
Query: 347 LGIKDH-IASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALE 405
G++ H WN +I+G+++ GM+E+A LF M +D SW+ MI+GYAQ Q A+
Sbjct: 354 -GMEVHDTVCWNTMISGYVQRGMLEEAMLLFQRMPNKDTVSWNTMIAGYAQGGQMRKAIG 412
Query: 406 LFH---------------GMVDAGV----------------KPNEITMVSVFCAIASSGT 434
+F G V G+ + + T S A A+
Sbjct: 413 IFRRMSRKNTVSWNSVISGFVQNGLFVDAFHHFMLMRRGTNRADWSTYASCLRACANLAA 472
Query: 435 LKEGRWAHEYVLNNSITLNDNLSA-AIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAI 493
L GR H +L S +ND + A+I YAKCG + A ++F + + + WNA+
Sbjct: 473 LHVGRQLHS-LLVRSGHINDLFARNALISTYAKCGRMLEAKQIFDEMVGK--DIVSWNAL 529
Query: 494 ICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYN 553
+ G A +G + ++ ++E ++ + +TF+G+LS C AGL+D G +F SM Y+
Sbjct: 530 VDGYASNGQGTEAISVFREMEANGVRPDEVTFVGILSACSRAGLIDEGLGFFNSMTEEYS 589
Query: 554 VEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAA 613
++P +HY CM DLLGRAG+L +A E+++ M ++ + +WG LL A +++ N E+ AA
Sbjct: 590 LKPVAEHYACMADLLGRAGKLNEAFELVQGMQIQPNAGVWGALLGACQMYKNHELARLAA 649
Query: 614 KSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSG 663
+ L+ L+P + VLLSNI A+AG+W++A R +++ G + PG +G
Sbjct: 650 EKLSELEPCRASNYVLLSNISAEAGKWDEAEKARASIKEKGANKPPGLAG 699
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 105/415 (25%), Positives = 187/415 (45%), Gaps = 37/415 (8%)
Query: 190 VIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPS 249
V S L L AR LFD M RN V++N ML+ A+ G ++ AR LF+ +PS
Sbjct: 18 VFRSNQELTRLARSGQLAAARRLFDSMPRRNTVTYNSMLSALARHGRIDEARALFDGMPS 77
Query: 250 KDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQI 309
++ VSW MI R+++A ++ M + +D ++S RA GE
Sbjct: 78 RNAVSWNAMIAALSDHGRVADARGLFDRM----PSRDDFSWTVMVSCYARA---GELELA 130
Query: 310 HSIIVKAGFD----CYDFIQATIIHFYAACGRINLA-RLQFELGIKDHIASWNALIAGFI 364
++ + D CY+ +I YA GR + A +L E+ D + SWN+ +AG
Sbjct: 131 RDVLDRMPGDKCTACYN----AMISGYAKNGRFDDAVKLLREMPAPD-LFSWNSALAGLT 185
Query: 365 RNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVS 424
++G + A Q F+ M ++D+ SW+ M+ G+ + + A F G +++ PN ++ V+
Sbjct: 186 QSGQMVRAVQFFDEMVEKDMVSWNLMLEGFVRAGDLDAAASFF-GRIES---PNVVSWVT 241
Query: 425 VFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRT 484
+ +G + + R + + ++ + ++D Y + + A ++F + +
Sbjct: 242 LLNGYCRAGRISDARDLFDRMPERNVVACN----VMLDGYVRLSRLEEACKLFDEMPGK- 296
Query: 485 TSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERY 544
S+S W II GLA G + + + + G L +V+ +
Sbjct: 297 NSIS-WTTIISGLARAGKLQEAKDLLDKMSFNCVAAKTALMHGYL----QRNMVNDARQI 351
Query: 545 FKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAA 599
F M+ D + M+ + G LE+A + + MP K D V W T++A
Sbjct: 352 FDGMEV-----HDTVCWNTMISGYVQRGMLEEAMLLFQRMPNK-DTVSWNTMIAG 400
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 134/319 (42%), Gaps = 70/319 (21%)
Query: 48 LIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLND 107
L+F+ +T N++I YA+ G + +A +F S + V+ N +ISG+++N D
Sbjct: 381 LLFQRMPNKDTVSWNTMIAGYAQGGQMRKAIGIFRRMSRKNTVSWNSVISGFVQNGLFVD 440
Query: 108 AREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVH 167
A F M+M N + T AS + + +
Sbjct: 441 AFHHF-------------MLMRRGTNRA------------------DWSTYASCLRACAN 469
Query: 168 LGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVM 227
L + R LH L+++ + L++ Y C ++EA+ +FDEM ++IVSWN +
Sbjct: 470 LAALHVGRQLHSLLVRSGHINDLFARNALISTYAKCGRMLEAKQIFDEMVGKDIVSWNAL 529
Query: 228 LNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPND 287
++G+A G + +EA++++R M +G+ P++
Sbjct: 530 VDGYASNG-------------------------------QGTEAISVFREMEANGVRPDE 558
Query: 288 VMIVDLISACGRAMAFGEGLQ-IHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFE 346
V V ++SAC RA EGL +S+ + A + G++N A FE
Sbjct: 559 VTFVGILSACSRAGLIDEGLGFFNSMTEEYSLKPVAEHYACMADLLGRAGKLNEA---FE 615
Query: 347 L----GIKDHIASWNALIA 361
L I+ + W AL+
Sbjct: 616 LVQGMQIQPNAGVWGALLG 634
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 80/171 (46%), Gaps = 33/171 (19%)
Query: 3 LDHFHSVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQN 62
+D FH F + +D+ S LR C+ A+ G+Q+HSL+ +SG ++ F +N
Sbjct: 439 VDAFHH-FMLMRRGTNRADWS-TYASCLRACANLAALHVGRQLHSLLVRSGHINDLFARN 496
Query: 63 SLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVS 122
+LI+ YAKCG + +AK +FD D V+ N ++ GY
Sbjct: 497 ALISTYAKCGRMLEAKQIFDEMVGKDIVSWNALVDGY----------------------- 533
Query: 123 YTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWE 173
A N EA+ VFR+M GV P+EVT ++S+ G I E
Sbjct: 534 --------ASNGQGTEAISVFREMEANGVRPDEVTFVGILSACSRAGLIDE 576
>gi|359488559|ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
mitochondrial-like [Vitis vinifera]
Length = 735
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 188/559 (33%), Positives = 297/559 (53%), Gaps = 76/559 (13%)
Query: 113 DKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIW 172
DKT + S+ S+I A++ EAL F MR L + PN T I S L +
Sbjct: 113 DKTNV---FSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLH 169
Query: 173 ECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFA 232
R H + + + +S+ L++MY C L +AR+
Sbjct: 170 SGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDART--------------------- 208
Query: 233 KAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLC-------DG-IA 284
LF+ I +++VSW +MI GY+Q + AL +++ L DG +
Sbjct: 209 ----------LFDEISHRNIVSWTSMITGYVQNDDAHRALLLFKEFLVEESGSEGDGEVC 258
Query: 285 PNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQ 344
+ + +V ++SAC R +H ++K GF+ ++ T++ YA CG
Sbjct: 259 VDPIAMVSVLSACSRVSEKSITEGVHGFLIKRGFEGDLGVENTLMDAYAKCG-------- 310
Query: 345 FELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMAL 404
ELG+ +R++F+ M +RDV SW+++I+ YAQN ++
Sbjct: 311 -ELGV----------------------SRRVFDGMAERDVISWNSIIAVYAQNGMSTESM 347
Query: 405 ELFHGMV-DAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDM 463
E+FH MV D + N +T+ +V A A SG+ + G+ H+ V+ + N + +IIDM
Sbjct: 348 EIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDM 407
Query: 464 YAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSI 523
Y KCG + A + F +R++ +V W+A++ G MHG A L+++ ++ +K N I
Sbjct: 408 YCKCGKVEMARKAFDRMREK--NVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYI 465
Query: 524 TFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRS 583
TF+ VL+ C HAGL++ G +FK+M ++VEP ++HYGCMVDLLGRAG L++A ++I+
Sbjct: 466 TFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKG 525
Query: 584 MPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDA 643
M ++ D V+WG LL A R+H NV++GE +A+ L L P + VLLSNIYADAGRWED
Sbjct: 526 MKLRPDFVVWGALLGACRMHKNVDLGEISARKLFELDPKNCGYYVLLSNIYADAGRWEDV 585
Query: 644 FSIRKEMRDCGMKRLPGFS 662
+R M++ G+ + PGFS
Sbjct: 586 ERMRILMKNSGLVKPPGFS 604
Score = 163 bits (413), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 126/491 (25%), Positives = 219/491 (44%), Gaps = 112/491 (22%)
Query: 29 ALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLD 88
A++ CSA + + G+Q H G E + F+ ++L+++Y+KCG
Sbjct: 158 AIKSCSALLDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCG---------------- 201
Query: 89 PVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRI 148
L DAR +FD+ + VS+TSMI G+ QND AL +F++ +
Sbjct: 202 ---------------ELRDARTLFDEISHRNIVSWTSMITGYVQNDDAHRALLLFKEFLV 246
Query: 149 L--------GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMY 200
V + + + SV+S+ + +HG +IK +G + + L++ Y
Sbjct: 247 EESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEGVHGFLIKRGFEGDLGVENTLMDAY 306
Query: 201 CVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMID 260
C L +R +FD M ER+++SWN ++ +A+ G+ + E+F R
Sbjct: 307 AKCGELGVSRRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHR-------------- 352
Query: 261 GYLQVERLSEALTMYRAMLCDG-IAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFD 319
M+ DG I N V + ++ AC + + G IH ++K G +
Sbjct: 353 -----------------MVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLE 395
Query: 320 CYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNM 379
F+ +II Y CG++ +AR F+ + ++ SW+A++AG+ GM A++
Sbjct: 396 SNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGY---GMHGHAKE----- 447
Query: 380 QKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG- 438
ALE+F+ M AGVKPN IT VSV A + +G L+EG
Sbjct: 448 -----------------------ALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGW 484
Query: 439 RW----AHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAII 494
W +HE+ + + ++D+ + G + AF++ ++ R V W A++
Sbjct: 485 HWFKAMSHEFDVEPGV----EHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVV-WGALL 539
Query: 495 CGLAMHGDANL 505
MH + +L
Sbjct: 540 GACRMHKNVDL 550
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/370 (23%), Positives = 153/370 (41%), Gaps = 94/370 (25%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+A+VS L CS S + +H + K G E + ++N+L++ YAKCG + ++ +FD
Sbjct: 262 IAMVSVLSACSRVSEKSITEGVHGFLIKRGFEGDLGVENTLMDAYAKCGELGVSRRVFDG 321
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
+ D ++ N +I+ Y AQN E++E+F
Sbjct: 322 MAERDVISWNSIIAVY-------------------------------AQNGMSTESMEIF 350
Query: 144 RDMRILGVIP-NEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
M G I N VTL++V+ + H G + +H VIK+ ++ V + T++++MYC
Sbjct: 351 HRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCK 410
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
C + AR FD M+E+N+ SW+ M+ G+ G
Sbjct: 411 CGKVEMARKAFDRMREKNVKSWSAMVAGYGMHG--------------------------- 443
Query: 263 LQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD 322
EAL ++ M G+ PN + V +++AC A EG
Sbjct: 444 ----HAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGW--------------- 484
Query: 323 FIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKR 382
H++ A + E ++ + + ++ R G +++A L M+ R
Sbjct: 485 -------HWFKA--------MSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLR 529
Query: 383 -DVYSWSAMI 391
D W A++
Sbjct: 530 PDFVVWGALL 539
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 129/302 (42%), Gaps = 51/302 (16%)
Query: 21 DYELALVSALRYCSAHIAVSQ-GQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKS 79
+Y +SA+ AH + G+ IH + K GLESN F+ S+I++Y KCG + A
Sbjct: 360 NYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMA-- 417
Query: 80 MFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREA 139
R+ FD+ K S+++M+ G+ + +EA
Sbjct: 418 -----------------------------RKAFDRMREKNVKSWSAMVAGYGMHGHAKEA 448
Query: 140 LEVFRDMRILGVIPNEVTLASVISSSVHLGGI-----WECRMLHGLVIKLMIDGFVIIST 194
LEVF +M + GV PN +T SV+++ H G + W M H ++ ++ +
Sbjct: 449 LEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHY----G 504
Query: 195 NLLNMYCVCSSLVEARSLFDEMKER-NIVSWNVMLNGFAKAGLVEL----ARELFERIPS 249
++++ L EA L MK R + V W +L V+L AR+LFE P
Sbjct: 505 CMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGACRMHKNVDLGEISARKLFELDP- 563
Query: 250 KDVVSWGTMIDGYLQVERLSEALTMYRAMLCDG-IAPNDVMIVDLISACGRAMAFGEGLQ 308
K+ + + + Y R + M M G + P +VD+ GR F G +
Sbjct: 564 KNCGYYVLLSNIYADAGRWEDVERMRILMKNSGLVKPPGFSLVDIK---GRVHVFLVGDR 620
Query: 309 IH 310
H
Sbjct: 621 EH 622
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 107/236 (45%), Gaps = 19/236 (8%)
Query: 375 LFNN-MQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSG 433
LFN + K +V+SW+++I+ A++ AL F M +KPN T CAI S
Sbjct: 107 LFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFP---CAIKSCS 163
Query: 434 T---LKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPW 490
L GR AH+ L + +S+A++DMY+KCG + A +F I R ++ W
Sbjct: 164 ALLDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHR--NIVSW 221
Query: 491 NAIICGLAMHGDANLTLKIYSDL--------EKRNIKLNSITFIGVLSTCCHAGLVDLGE 542
++I G + DA+ L ++ + + ++ I + VLS C + E
Sbjct: 222 TSMITGYVQNDDAHRALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITE 281
Query: 543 RYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLA 598
+ E DL ++D + G+L + V M + DV+ W +++A
Sbjct: 282 GVHGFLIK-RGFEGDLGVENTLMDAYAKCGELGVSRRVFDGMAER-DVISWNSIIA 335
>gi|449530628|ref|XP_004172296.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g21090-like [Cucumis sativus]
Length = 611
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 168/476 (35%), Positives = 271/476 (56%), Gaps = 3/476 (0%)
Query: 190 VIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPS 249
I++ +L+ MY C VEAR +FD+M RN+ SWN ML G+AK G V AR+LF+R+
Sbjct: 98 TIVANHLIGMYFECGRDVEARKVFDKMSVRNLYSWNHMLAGYAKLGDVNNARKLFDRMME 157
Query: 250 KDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQI 309
KDVVSW T++ Y + +EA+ +YR + N ++ C + Q+
Sbjct: 158 KDVVSWNTIVLAYAKQGCFNEAIGLYRDFRRLDMGFNAFSFAGVLILCVKLKELQLAKQV 217
Query: 310 HSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQF-ELGIKDHIASWNALIAGFIRNGM 368
H ++ AGF + ++I+ Y+ CG + AR F E+ +KD I +W +++G+ + G
Sbjct: 218 HGQVLVAGFLSNLVLSSSIVDAYSKCGEMRCARTLFDEMLVKD-IHAWTTIVSGYAKWGD 276
Query: 369 IEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCA 428
+ A +LF+ M +++ SWSA+ISGYA+N + AL+ F M+ G+ P + T S CA
Sbjct: 277 MNSASELFHQMPEKNPVSWSALISGYARNSLGHEALDYFTKMMKFGINPEQYTFSSCLCA 336
Query: 429 IASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVS 488
AS LK G+ H Y++ N + +++IDMY+KCG + + VF H+ V
Sbjct: 337 CASIAALKHGKQVHGYLIRTYFRCNTIVVSSLIDMYSKCGMLEASCCVF-HLMGNKQDVV 395
Query: 489 PWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSM 548
WN +I LA +G +++++D+ + +K + ITFI +LS C H+GLV G R+FK+M
Sbjct: 396 VWNTMISALAQNGHGEKAMQMFNDMVESGLKPDRITFIVILSACSHSGLVQEGLRFFKAM 455
Query: 549 KSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEV 608
+ V PD +HY C++DLLGRAG + + +M K D +W LL RIH N+E+
Sbjct: 456 TYDHGVFPDQEHYACLIDLLGRAGCFVELVNELENMSCKPDDRVWSALLGVCRIHNNIEL 515
Query: 609 GERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
G + A+ + L+P + V L+++YA G+WE +R+ M + +++ G S +
Sbjct: 516 GRKVAERVIELKPQSSAAYVSLASLYAFLGKWESVEKVRELMDEKFIRKERGISWI 571
Score = 211 bits (537), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 125/449 (27%), Positives = 228/449 (50%), Gaps = 40/449 (8%)
Query: 26 LVSALRYCSAHIAVSQGQQIHSLIFKSGLE-SNTFIQNSLINLYAKCGLISQAKSMFDSC 84
V LR C+ G+ +H + +G + T + N LI +Y +CG +A+ +FD
Sbjct: 65 FVDLLRLCAKAKYFKGGKCVHLHLKHTGFKRPTTIVANHLIGMYFECGRDVEARKVFDKM 124
Query: 85 STLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFR 144
S + + N M++GY + +N+AR++FD+ K VS+ ++++ +A+ C+ EA+ ++R
Sbjct: 125 SVRNLYSWNHMLAGYAKLGDVNNARKLFDRMMEKDVVSWNTIVLAYAKQGCFNEAIGLYR 184
Query: 145 DMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFV---IISTNLLNMYC 201
D R L + N + A V+ V L + + +HG ++++ GF+ ++S+++++ Y
Sbjct: 185 DFRRLDMGFNAFSFAGVLILCVKLKELQLAKQVHG---QVLVAGFLSNLVLSSSIVDAYS 241
Query: 202 VCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDG 261
C + AR+LFDEM ++I +W +++G+AK G + A ELF ++P K+ VSW +I G
Sbjct: 242 KCGEMRCARTLFDEMLVKDIHAWTTIVSGYAKWGDMNSASELFHQMPEKNPVSWSALISG 301
Query: 262 YLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCY 321
Y + EAL + M+ GI P + AC A G Q+H +++ F C
Sbjct: 302 YARNSLGHEALDYFTKMMKFGINPEQYTFSSCLCACASIAALKHGKQVHGYLIRTYFRCN 361
Query: 322 DFIQATIIHFYAACGRINLARLQFEL-GIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ 380
+ +++I Y+ CG + + F L G K + WN +I+ +NG E A Q+FN+
Sbjct: 362 TIVVSSLIDMYSKCGMLEASCCVFHLMGNKQDVVVWNTMISALAQNGHGEKAMQMFND-- 419
Query: 381 KRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG-R 439
MV++G+KP+ IT + + A + SG ++EG R
Sbjct: 420 -----------------------------MVESGLKPDRITFIVILSACSHSGLVQEGLR 450
Query: 440 WAHEYVLNNSITLNDNLSAAIIDMYAKCG 468
+ ++ + + A +ID+ + G
Sbjct: 451 FFKAMTYDHGVFPDQEHYACLIDLLGRAG 479
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 105/406 (25%), Positives = 176/406 (43%), Gaps = 51/406 (12%)
Query: 267 RLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQA 326
RL EAL+ + GI + VDL+ C +A F G +H + GF I A
Sbjct: 42 RLPEALSYLDRLAQRGIRLPTGIFVDLLRLCAKAKYFKGGKCVHLHLKHTGFKRPTTIVA 101
Query: 327 T-IIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVY 385
+I Y CGR AR F+ ++ SWN ++AG+ + G + +AR+LF+ M ++DV
Sbjct: 102 NHLIGMYFECGRDVEARKVFDKMSVRNLYSWNHMLAGYAKLGDVNNARKLFDRMMEKDVV 161
Query: 386 SWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYV 445
SW+ ++ YA+ N A+ L+ + N + V L+ + H V
Sbjct: 162 SWNTIVLAYAKQGCFNEAIGLYRDFRRLDMGFNAFSFAGVLILCVKLKELQLAKQVHGQV 221
Query: 446 LNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANL 505
L N LS++I+D Y+KCG + A +F + + W I+ G A GD N
Sbjct: 222 LVAGFLSNLVLSSSIVDAYSKCGEMRCARTLFDEM--LVKDIHAWTTIVSGYAKWGDMNS 279
Query: 506 TLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPD-------- 557
+++ + ++ N +++ ++S L YF M + + P+
Sbjct: 280 ASELFHQMPEK----NPVSWSALISGYARNSLGHEALDYFTKMMK-FGINPEQYTFSSCL 334
Query: 558 --------LKH------------YGC-------MVDLLGRAGQLEDAEEVIRSMPMKADV 590
LKH + C ++D+ + G LE + V M K DV
Sbjct: 335 CACASIAALKHGKQVHGYLIRTYFRCNTIVVSSLIDMYSKCGMLEASCCVFHLMGNKQDV 394
Query: 591 VIWGTLLAASRIHGNVEVGERAAKSL-----AGLQPSHGPSRVLLS 631
V+W T+++A +G+ GE+A + +GL+P V+LS
Sbjct: 395 VVWNTMISALAQNGH---GEKAMQMFNDMVESGLKPDRITFIVILS 437
>gi|357509307|ref|XP_003624942.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499957|gb|AES81160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1092
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 199/633 (31%), Positives = 313/633 (49%), Gaps = 97/633 (15%)
Query: 35 AHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNI 94
A +++ G+++H +FK G E + F+ SL++LY++ G+
Sbjct: 133 ACVSLVDGKKVHCCVFKMGFEDDVFVAASLVHLYSRYGV--------------------- 171
Query: 95 MISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPN 154
L+ A +VF P+K S+ +MI GF QN AL V M+ GV +
Sbjct: 172 ----------LDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMD 221
Query: 155 EVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFD 214
+T+AS++ + ++H V+K +D V +S L+NMY L +A+ +FD
Sbjct: 222 TITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFD 281
Query: 215 EMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTM 274
+M+ R++VSWN ++I Y Q S AL
Sbjct: 282 QMEVRDLVSWN-------------------------------SIIAAYEQNNDPSTALRF 310
Query: 275 YRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD-FIQATIIHFYA 333
++ M GI P+ + +V L S + I +++ + D I +++ YA
Sbjct: 311 FKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYA 370
Query: 334 ACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQK-RDVYSWSAMIS 392
G +N A F+ + SWN L+ G+ +NG+ +A +N M++ RD
Sbjct: 371 KLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTI------- 423
Query: 393 GYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITL 452
PN+ T VS+ A + G L++G H ++ NS+ L
Sbjct: 424 ------------------------PNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYL 459
Query: 453 NDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSD 512
+ ++ +ID+Y KCG + A +FY I R TSV PWNAII L +HG L+++ D
Sbjct: 460 DVFVATCLIDLYGKCGRLEDAMSLFYEI-PRDTSV-PWNAIIASLGIHGRGEEALQLFKD 517
Query: 513 LEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAG 572
+ +K + ITF+ +LS C H+GLVD G++ F M+ Y ++P LKHYGCMVDLLGRAG
Sbjct: 518 MLAERVKADHITFVSLLSACSHSGLVDEGQKCFDIMQKEYGIKPSLKHYGCMVDLLGRAG 577
Query: 573 QLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSN 632
LE A E++R+MP++ D IWG LL+A +I+GN E+G A+ L + + VLLSN
Sbjct: 578 YLEKAYELVRNMPIQPDASIWGALLSACKIYGNAELGTLASDRLLEVDSENVGYYVLLSN 637
Query: 633 IYADAGRWEDAFSIRKEMRDCGMKRLPGFSGVV 665
IYA+ +WE +R RD G+++ PG+S VV
Sbjct: 638 IYANTEKWEGVIKVRSLARDRGLRKTPGWSSVV 670
Score = 149 bits (375), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 134/575 (23%), Positives = 253/575 (44%), Gaps = 102/575 (17%)
Query: 37 IAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMI 96
+ V+ +++H+L+ G N + LINLY G IS ++S FD + + N +I
Sbjct: 33 VNVNATKKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSII 92
Query: 97 SGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEV 156
S Y+R + ++A + C SM G +R P+
Sbjct: 93 SAYVRFGKYHEA--------MNCVNQLFSMCGG--------------GHLR-----PDFY 125
Query: 157 TLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEM 216
T ++ + V L + + +H V K+ + V ++ +L+++Y L A +F +M
Sbjct: 126 TFPPILKACVSL---VDGKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDM 182
Query: 217 KERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYR 276
+++ SWN M++GF + G + AL +
Sbjct: 183 PVKDVGSWNAMISGFCQNG-------------------------------NAAGALGVLN 211
Query: 277 AMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACG 336
M +G+ + + + ++ C ++ G+ IH ++K G D F+ +I+ Y+ G
Sbjct: 212 RMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFG 271
Query: 337 RINLARLQF-ELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYA 395
R+ A++ F ++ ++D + SWN++IA Y
Sbjct: 272 RLQDAQMVFDQMEVRD-LVSWNSIIA-------------------------------AYE 299
Query: 396 QNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLND- 454
QN P+ AL F GM G++P+ +T+VS+ + + R +V+ D
Sbjct: 300 QNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDV 359
Query: 455 NLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLE 514
+ A+++MYAK G +N A VF + R ++S WN ++ G +G A+ + Y+ +E
Sbjct: 360 VIGNALVNMYAKLGYMNCAHTVFDQL-PRKDTIS-WNTLVTGYTQNGLASEAIDAYNMME 417
Query: 515 K-RNIKLNSITFIGVLSTCCHAGLVDLGER-YFKSMKSVYNVEPDLKHYGCMVDLLGRAG 572
+ R+ N T++ ++ H G + G + + K +K+ ++ D+ C++DL G+ G
Sbjct: 418 ECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKN--SLYLDVFVATCLIDLYGKCG 475
Query: 573 QLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVE 607
+LEDA + +P V W ++A+ IHG E
Sbjct: 476 RLEDAMSLFYEIPRDTSVP-WNAIIASLGIHGRGE 509
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 119/489 (24%), Positives = 201/489 (41%), Gaps = 105/489 (21%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+ + S L C+ V G IH + K GL+S+ F+ N+LIN+Y+K G + A+ +FD
Sbjct: 223 ITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQ 282
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
D V+ N S+I + QN+ AL F
Sbjct: 283 MEVRDLVSWN-------------------------------SIIAAYEQNNDPSTALRFF 311
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKL-MIDGFVIISTNLLNMYCV 202
+ M++ G+ P+ +T+ S+ S L R + G VI+ +D V+I L+NMY
Sbjct: 312 KGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAK 371
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
+ A ++FD++ ++ +SWN ++ G+ + GL A ID Y
Sbjct: 372 LGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEA------------------IDAY 413
Query: 263 LQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD 322
+E C PN V +I A A +G++IH+ ++K
Sbjct: 414 NMMEE------------CRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDV 461
Query: 323 FIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKR 382
F+ +I Y CGR+ A F +D WNA+IA +G E+A QLF +
Sbjct: 462 FVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEEALQLFKD---- 517
Query: 383 DVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAH 442
M+ VK + IT VS+ A + SG + EG+
Sbjct: 518 ---------------------------MLAERVKADHITFVSLLSACSHSGLVDEGQKCF 550
Query: 443 EYVLNNSITLNDNLS--AAIIDMYAKCGSINTAFEVFYHIRDRTTSVSP----WNAIICG 496
+ ++ + +L ++D+ + G + A+E+ R + P W A++
Sbjct: 551 D-IMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELV-----RNMPIQPDASIWGALLSA 604
Query: 497 LAMHGDANL 505
++G+A L
Sbjct: 605 CKIYGNAEL 613
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 146/302 (48%), Gaps = 19/302 (6%)
Query: 331 FYAACGRINLAR----LQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYS 386
+ +C +N + L G +I LI ++ +G I +R F+ + K++++S
Sbjct: 28 LFNSCVNVNATKKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFS 87
Query: 387 WSAMISGYAQ----NEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAH 442
W+++IS Y + +E N +LF ++P+ T + A S L +G+ H
Sbjct: 88 WNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVS---LVDGKKVH 144
Query: 443 EYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGD 502
V + ++A+++ +Y++ G ++ A +VF + V WNA+I G +G+
Sbjct: 145 CCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDM--PVKDVGSWNAMISGFCQNGN 202
Query: 503 ANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGER-YFKSMKSVYNVEPDLKHY 561
A L + + ++ +K+++IT +L C + V G + +K + ++ D+
Sbjct: 203 AAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLK--HGLDSDVFVS 260
Query: 562 GCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAK--SLAGL 619
++++ + G+L+DA+ V M ++ D+V W +++AA + + R K L G+
Sbjct: 261 NALINMYSKFGRLQDAQMVFDQMEVR-DLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGI 319
Query: 620 QP 621
+P
Sbjct: 320 RP 321
>gi|414866530|tpg|DAA45087.1| TPA: hypothetical protein ZEAMMB73_840863 [Zea mays]
Length = 851
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 196/571 (34%), Positives = 304/571 (53%), Gaps = 26/571 (4%)
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
S ST V N I+ R + AR F+ P++ SY +++ G+ +N AL V
Sbjct: 11 SSSTPAVVDANARIARLARTGNMEGARATFEAMPLRTTASYNALLAGYFRNHLPDAALRV 70
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
F M + + L S +S H + + V+ T+LL Y
Sbjct: 71 FHRMPTRD-LASYNALISGLSLRRH-----TLPDAAAALATIPYPPSVVSFTSLLRGYVR 124
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
L +A LF +M ERN +S+ V+L GF AG V+ AR+LF+ +P+KDVV+W M+ GY
Sbjct: 125 HGLLADAIQLFRQMPERNHISYTVLLGGFLDAGRVDEARKLFDEMPAKDVVAWTAMLSGY 184
Query: 263 LQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCY- 321
QV R+ EA T++ M P +++S + + Q++ + + F+
Sbjct: 185 CQVGRVDEARTLFDEM------PKR----NVVSWTAMVSGYAQNGQVN--LARKLFEVMP 232
Query: 322 --DFIQATIIHF-YAACGRINLARLQFELGIKDH-IASWNALIAGFIRNGMIEDARQLFN 377
+ + T + F Y GRI A F + DH +A+ N +I GF + GM++ A+ +F+
Sbjct: 233 ERNEVSWTAMLFGYIQAGRIEDAEELFN-AMPDHPLAACNGMIVGFGQQGMVDAAKSVFD 291
Query: 378 NMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKE 437
M +RD +WSA+I Y QNE AL F M+ G++PN +++S+ A+ L
Sbjct: 292 RMCERDDGTWSAIIKAYEQNEFLMEALSTFREMLHIGIRPNYPSVISILTVCAALAVLDY 351
Query: 438 GRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGL 497
GR H +L S ++ +A+I MY KCG+++ A VF+ + V WN++I G
Sbjct: 352 GREVHGAMLRRSFDMDIYAVSALITMYIKCGNLDKAKRVFHMFEPK--DVVMWNSMITGY 409
Query: 498 AMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPD 557
A HG L I+ D+ + + IT+IG L+ C + G V G F SM++ ++P
Sbjct: 410 AQHGLGEEALHIFDDMRLAGMVPDGITYIGALTACSYTGKVKEGRDIFNSMRTKSGIKPG 469
Query: 558 LKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLA 617
L+HY CMVDLLGRAG +++A +I++MP++ D VIWG L+ A R+H N E+ E +AK L
Sbjct: 470 LEHYACMVDLLGRAGLVDEALYLIKTMPVEPDAVIWGALMGACRMHKNAEIAEISAKKLL 529
Query: 618 GLQPSHGPSRVLLSNIYADAGRWEDAFSIRK 648
L+P + VLLS+IY +GRWEDA ++RK
Sbjct: 530 ELEPGNAGPYVLLSHIYTSSGRWEDASNMRK 560
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 117/464 (25%), Positives = 208/464 (44%), Gaps = 84/464 (18%)
Query: 49 IFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDA 108
+F+ E N L+ + G + +A+ +FD D VA M+SGY + R+++A
Sbjct: 134 LFRQMPERNHISYTVLLGGFLDAGRVDEARKLFDEMPAKDVVAWTAMLSGYCQVGRVDEA 193
Query: 109 REVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIP--NEVTLASVISSSV 166
R +FD+ P + VS+T+M+ G+AQN A ++F V+P NEV+
Sbjct: 194 RTLFDEMPKRNVVSWTAMVSGYAQNGQVNLARKLFE------VMPERNEVS--------- 238
Query: 167 HLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNV 226
W T +L Y + +A LF+ M + + + N
Sbjct: 239 -----W---------------------TAMLFGYIQAGRIEDAEELFNAMPDHPLAACNG 272
Query: 227 MLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPN 286
M+ GF + G+V+ A+ +F+R+ +D +W +I Y Q E L EAL+ +R ML GI PN
Sbjct: 273 MIVGFGQQGMVDAAKSVFDRMCERDDGTWSAIIKAYEQNEFLMEALSTFREMLHIGIRPN 332
Query: 287 DVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFE 346
++ +++ C G ++H +++ FD + + +I Y CG ++ A+ F
Sbjct: 333 YPSVISILTVCAALAVLDYGREVHGAMLRRSFDMDIYAVSALITMYIKCGNLDKAKRVFH 392
Query: 347 LGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALEL 406
+ + WN++I G+ ++G+ E+A +F++M+
Sbjct: 393 MFEPKDVVMWNSMITGYAQHGLGEEALHIFDDMRL------------------------- 427
Query: 407 FHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNS-ITLNDNLSAAIIDMYA 465
AG+ P+ IT + A + +G +KEGR + S I A ++D+
Sbjct: 428 ------AGMVPDGITYIGALTACSYTGKVKEGRDIFNSMRTKSGIKPGLEHYACMVDLLG 481
Query: 466 KCGSINTAFEVFYHIRDRTTSVSP----WNAIICGLAMHGDANL 505
+ G ++ E Y I +T V P W A++ MH +A +
Sbjct: 482 RAGLVD---EALYLI--KTMPVEPDAVIWGALMGACRMHKNAEI 520
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 98/241 (40%), Gaps = 72/241 (29%)
Query: 25 ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSC 84
+++S L C+A + G+++H + + + + + ++LI +Y KCG + +AK +F
Sbjct: 335 SVISILTVCAALAVLDYGREVHGAMLRRSFDMDIYAVSALITMYIKCGNLDKAKRVFHMF 394
Query: 85 STLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFR 144
D V N MI+GY AQ+ EAL +F
Sbjct: 395 EPKDVVMWNSMITGY-------------------------------AQHGLGEEALHIFD 423
Query: 145 DMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCS 204
DMR+ G++P+ +T ++G + C
Sbjct: 424 DMRLAGMVPDGIT---------YIGALTAC--------------------------SYTG 448
Query: 205 SLVEARSLFDEMKERNIVS-----WNVMLNGFAKAGLVELARELFERIP-SKDVVSWGTM 258
+ E R +F+ M+ ++ + + M++ +AGLV+ A L + +P D V WG +
Sbjct: 449 KVKEGRDIFNSMRTKSGIKPGLEHYACMVDLLGRAGLVDEALYLIKTMPVEPDAVIWGAL 508
Query: 259 I 259
+
Sbjct: 509 M 509
>gi|168048332|ref|XP_001776621.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672066|gb|EDQ58609.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 703
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 196/636 (30%), Positives = 311/636 (48%), Gaps = 95/636 (14%)
Query: 27 VSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCST 86
V L+ C + +Q+H I KS +E N + N+L+++Y +CG
Sbjct: 32 VEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNNLLHVYIECG-------------- 77
Query: 87 LDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDM 146
RL +AR VFD K S+ +MI G+ ++ +A+ +FR+M
Sbjct: 78 -----------------RLQEARCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREM 120
Query: 147 RILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSL 206
GV PN T ++ + L + + +H + ++ V + T LL MY C S+
Sbjct: 121 CHEGVQPNAGTYMIILKACASLSALKWGKEVHACIRHGGLESDVRVGTALLRMYGKCGSI 180
Query: 207 VEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVE 266
EA R +F+ + + D++SW MI Y Q
Sbjct: 181 NEA-------------------------------RRIFDNLMNHDIISWTVMIGAYAQSG 209
Query: 267 RLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQA 326
EA + M +G PN + V +++AC A ++H + AG +
Sbjct: 210 NGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGALKWVKRVHRHALDAGLE------- 262
Query: 327 TIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYS 386
L +G AL+ + ++G I+DAR +F+ M+ RDV S
Sbjct: 263 ----------------LDVRVG--------TALVQMYAKSGSIDDARVVFDRMKVRDVVS 298
Query: 387 WSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVL 446
W+ MI +A++ + + A +LF M G KP+ I +S+ A AS+G L+ + H + L
Sbjct: 299 WNVMIGAFAEHGRGHEAYDLFLQMQTEGCKPDAIMFLSILNACASAGALEWVKKIHRHAL 358
Query: 447 NNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLT 506
++ + ++ + A++ MY+K GSI+ A VF ++ R +V WNA+I GLA HG
Sbjct: 359 DSGLEVDVRVGTALVHMYSKSGSIDDARVVFDRMKVR--NVVSWNAMISGLAQHGLGQDA 416
Query: 507 LKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVD 566
L+++ + +K + +TF+ VLS C HAGLVD G + +M VY +EPD+ H CMVD
Sbjct: 417 LEVFRRMTAHGVKPDRVTFVAVLSACSHAGLVDEGRSQYLAMTQVYGIEPDVSHCNCMVD 476
Query: 567 LLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPS 626
LLGRAG+L +A+ I +M + D WG LL + R +GNVE+GE AK L P + +
Sbjct: 477 LLGRAGRLMEAKLFIDNMAVDPDEATWGALLGSCRTYGNVELGELVAKERLKLDPKNAAT 536
Query: 627 RVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
VLLSNIYA+AG+W+ +R MR+ G+++ PG S
Sbjct: 537 YVLLSNIYAEAGKWDMVSWVRTMMRERGIRKEPGRS 572
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 99/393 (25%), Positives = 172/393 (43%), Gaps = 42/393 (10%)
Query: 268 LSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQAT 327
LSEA+ + L G+ + M V+++ C + Q+H I+K+ + +
Sbjct: 9 LSEAIVVLMNRLQRGLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNN 68
Query: 328 IIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSW 387
++H Y CGR+ AR F+ +K ASWNA+IAG++ + ED
Sbjct: 69 LLHVYIECGRLQEARCVFDALVKKSGASWNAMIAGYVEHKHAED---------------- 112
Query: 388 SAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLN 447
A+ LF M GV+PN T + + A AS LK G+ H + +
Sbjct: 113 ---------------AMRLFREMCHEGVQPNAGTYMIILKACASLSALKWGKEVHACIRH 157
Query: 448 NSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTL 507
+ + + A++ MY KCGSIN A +F ++ + + W +I A G+
Sbjct: 158 GGLESDVRVGTALLRMYGKCGSINEARRIFDNLMNH--DIISWTVMIGAYAQSGNGKEAY 215
Query: 508 KIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDL 567
++ +E+ K N+IT++ +L+ C G + +R + +E D++ +V +
Sbjct: 216 RLMLQMEQEGFKPNAITYVSILNACASEGALKWVKRVHRHALDA-GLELDVRVGTALVQM 274
Query: 568 LGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSH-GPS 626
++G ++DA V M ++ DVV W ++ A HG G A +Q P
Sbjct: 275 YAKSGSIDDARVVFDRMKVR-DVVSWNVMIGAFAEHGR---GHEAYDLFLQMQTEGCKPD 330
Query: 627 RVLLSNIY---ADAGRWEDAFSIRKEMRDCGMK 656
++ +I A AG E I + D G++
Sbjct: 331 AIMFLSILNACASAGALEWVKKIHRHALDSGLE 363
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 147/302 (48%), Gaps = 21/302 (6%)
Query: 16 NLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFK---SGLESNTFIQNSLINLYAKCG 72
NL N D ++S A+ G++ + L+ + G + N S++N A G
Sbjct: 189 NLMNHD----IISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEG 244
Query: 73 LISQAKSM----FDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIM 128
+ K + D+ LD ++ Y ++ ++DAR VFD+ ++ VS+ MI
Sbjct: 245 ALKWVKRVHRHALDAGLELDVRVGTALVQMYAKSGSIDDARVVFDRMKVRDVVSWNVMIG 304
Query: 129 GFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDG 188
FA++ EA ++F M+ G P+ + S++++ G + + +H + ++
Sbjct: 305 AFAEHGRGHEAYDLFLQMQTEGCKPDAIMFLSILNACASAGALEWVKKIHRHALDSGLEV 364
Query: 189 FVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIP 248
V + T L++MY S+ +AR +FD MK RN+VSWN M++G A+ GL + A E+F R+
Sbjct: 365 DVRVGTALVHMYSKSGSIDDARVVFDRMKVRNVVSWNAMISGLAQHGLGQDALEVFRRMT 424
Query: 249 S----KDVVSWGTMIDGYLQVERLSEALTMYRAML-CDGIAPNDVM----IVDLISACGR 299
+ D V++ ++ + E + Y AM GI P DV +VDL+ GR
Sbjct: 425 AHGVKPDRVTFVAVLSACSHAGLVDEGRSQYLAMTQVYGIEP-DVSHCNCMVDLLGRAGR 483
Query: 300 AM 301
M
Sbjct: 484 LM 485
>gi|296081733|emb|CBI20738.3| unnamed protein product [Vitis vinifera]
Length = 865
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 208/669 (31%), Positives = 335/669 (50%), Gaps = 74/669 (11%)
Query: 42 GQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIR 101
G+ H+ I SG + F+ N+L+ +Y+KCG +S A+ +FD+ D V N ++ Y
Sbjct: 96 GKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGAYAA 155
Query: 102 NDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASV 161
+ ND G AQ E L +FR +R +TLA V
Sbjct: 156 SVDSND---------------------GNAQ-----EGLHLFRLLRASLGSTTRMTLAPV 189
Query: 162 ISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNI 221
+ ++ G +W +HG IK+ ++ V +S L+N+Y C + +AR LFD M+ER++
Sbjct: 190 LKLCLNSGCLWAAEGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDV 249
Query: 222 VSWNVMLNGFAKAGLVELARELFERI------PSK---------------DVVSWGTMID 260
V WN+ML G+ + GL + A +LF P + D + G +
Sbjct: 250 VLWNMMLKGYVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLILNGCLWAGTDDLELGKQVH 309
Query: 261 GYL-------QVERLSEALTMYRAMLCDGIAP---NDVMIVDL------ISACGRAMAFG 304
G V + + MY M C A ND+ +DL IS+C ++
Sbjct: 310 GIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEE 369
Query: 305 EGLQIHSIIVKAGFDCYDFIQATIIHFYA--ACGRINLARLQFEL-------GIKDHIAS 355
E + + ++ G F A+I A ACG + L ++ G +
Sbjct: 370 ESVNLFIDLLHEGLKPDHFTLASITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHV 429
Query: 356 WNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGV 415
+ ++ +I+ G + +A +FN + D +W++MISG N + AL ++H M + V
Sbjct: 430 NSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRV 489
Query: 416 KPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFE 475
P+E T ++ A + L++GR H V+ + + +++DMYAKCG+I A+
Sbjct: 490 MPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYR 549
Query: 476 VFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHA 535
+F + R +++ WNA++ GLA HG+A + ++ ++ I+ + ++FIG+LS C HA
Sbjct: 550 LFKKMNVR--NIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHA 607
Query: 536 GLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGT 595
GL Y SM + Y +EP+++HY C+VD LGRAG +++A++VI +MP KA I
Sbjct: 608 GLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRA 667
Query: 596 LLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGM 655
LL A RI G+VE G+R A L L+P + VLLSNIYA A RW+D RK M+ +
Sbjct: 668 LLGACRIQGDVETGKRVAARLFALEPFDSAAYVLLSNIYAAANRWDDVTDARKMMKRKNV 727
Query: 656 KRLPGFSGV 664
K+ PGFS +
Sbjct: 728 KKDPGFSWI 736
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 132/282 (46%), Gaps = 36/282 (12%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+ L +A + C + + QG+QIH+ K+G +S+ + + ++++Y KCG + A +F+
Sbjct: 393 ITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNY 452
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
S D VA MISG + N + +AL ++
Sbjct: 453 ISAPDDVAWTSMISGCVDNGNED-------------------------------QALRIY 481
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
MR V+P+E T A++I +S + + + R LH VIKL + T+L++MY C
Sbjct: 482 HRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKC 541
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPS----KDVVSWGTMI 259
++ +A LF +M RNI WN ML G A+ G E A LF+ + S D VS+ ++
Sbjct: 542 GNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGIL 601
Query: 260 DGYLQVERLSEALTMYRAMLCD-GIAPNDVMIVDLISACGRA 300
SEA +M D GI P L+ A GRA
Sbjct: 602 SACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRA 643
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 101/245 (41%), Gaps = 63/245 (25%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E + ++ S A+ QG+Q+H+ + K S+ F+ SL+++YAKCG
Sbjct: 493 EYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCG---------- 542
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+ DA +F K ++ + +M++G AQ+ EA+ +
Sbjct: 543 ---------------------NIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNL 581
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWEC-RMLHGLVIKLMIDGFVIISTNLLNMYC 201
F+ M+ G+ P+ V+ ++S+ H G E LH ++ N Y
Sbjct: 582 FKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLH----------------SMPNDYG 625
Query: 202 VCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDG 261
+ E I ++ +++ +AGLV+ A ++ E +P K S + G
Sbjct: 626 I---------------EPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRALLG 670
Query: 262 YLQVE 266
+++
Sbjct: 671 ACRIQ 675
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 99/213 (46%), Gaps = 21/213 (9%)
Query: 431 SSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPW 490
S+ L G+ H ++ + + LS ++ MY+KCGS+++A +VF +R + W
Sbjct: 89 STHNLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPER--DLVTW 146
Query: 491 NAIICGLAM-----HGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYF 545
NAI+ A G+A L ++ L +T VL C ++G + E
Sbjct: 147 NAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVH 206
Query: 546 KSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGN 605
+ +E D+ G +V++ + G++ DA + M + DVV+W +L G
Sbjct: 207 GYAIKI-GLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRER-DVVLWNMMLK-----GY 259
Query: 606 VEVG-ERAAKSL------AGLQPSHGPSRVLLS 631
V++G E+ A L +GL+P +++L+
Sbjct: 260 VQLGLEKEAFQLFSEFHRSGLRPDEFSVQLILN 292
>gi|115475988|ref|NP_001061590.1| Os08g0340900 [Oryza sativa Japonica Group]
gi|38423978|dbj|BAD01706.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|38637396|dbj|BAD03655.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|113623559|dbj|BAF23504.1| Os08g0340900 [Oryza sativa Japonica Group]
gi|215686971|dbj|BAG90841.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 819
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 209/720 (29%), Positives = 340/720 (47%), Gaps = 135/720 (18%)
Query: 13 QKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINL----- 67
QKA+ + + E L S LR C+ AVS G+Q+H + K L++N ++ +LINL
Sbjct: 111 QKASCEVPN-EFLLASVLRACTQSKAVSLGEQVHGIAVKLDLDANVYVGTALINLYAKLG 169
Query: 68 --------------------------YAKCGLISQAKSMFD------------------- 82
YA+ G A +FD
Sbjct: 170 CMDEAMLVFHALPVRTPVTWNTVITGYAQIGCGGVALELFDRMGIEGVRPDRFVLASAVS 229
Query: 83 SCSTL--------------------DPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVS 122
+CS L D N++I Y + RL+ AR++FD + VS
Sbjct: 230 ACSALGFLEGGRQIHGYAYRSATETDTSVINVLIDLYCKCSRLSAARKLFDCMEYRNLVS 289
Query: 123 YTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVI 182
+T+MI G+ QN EA+ +F +M G P+ S+++S L IW+ R +H VI
Sbjct: 290 WTTMISGYMQNSFNAEAITMFWNMTQAGWQPDGFACTSILNSCGSLAAIWQGRQIHAHVI 349
Query: 183 KLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARE 242
K ++ + L++MY C L EAR++
Sbjct: 350 KADLEADEYVKNALIDMYAKCEHLTEARAV------------------------------ 379
Query: 243 LFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMA 302
F+ + D +S+ MI+GY + L+EA+ +++ M + P+ + V L+ +A
Sbjct: 380 -FDALAEDDAISYNAMIEGYSKNRDLAEAVNIFQRMRFFSLRPSLLTFVSLLGVSSSQLA 438
Query: 303 FGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAG 362
QIH +I+K+G T + YAA +ALI
Sbjct: 439 IELSKQIHGLIIKSG---------TSLDLYAA----------------------SALIDV 467
Query: 363 FIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITM 422
+ + ++ DA+ +FN + +D+ W++MI G+AQNEQ A++LF+ ++ +G+ PNE T
Sbjct: 468 YSKCSLVNDAKTVFNMLHYKDMVIWNSMIFGHAQNEQGEEAIKLFNQLLLSGMAPNEFTF 527
Query: 423 VSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRD 482
V++ ++ ++ G+ H +++ + + ++S A+IDMYAKCG I +F
Sbjct: 528 VALVTVASTLASMFHGQQFHAWIIKAGVDNDPHVSNALIDMYAKCGFIKEGRMLFESTCG 587
Query: 483 RTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGE 542
V WN++I A HG A L+++ + + ++ N +TF+GVLS C HAG V G
Sbjct: 588 E--DVICWNSMITTYAQHGHAEEALQVFRLMGEAEVEPNYVTFVGVLSACAHAGFVGEGL 645
Query: 543 RYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRI 602
+F SMKS Y++EP ++HY +V+L GR+G+L A+E I MP+K +W +LL+A +
Sbjct: 646 NHFNSMKSNYDIEPGIEHYASVVNLFGRSGKLHAAKEFIERMPIKPAAAVWRSLLSACHL 705
Query: 603 HGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
GN E+G AA+ P+ VLLSNIYA G W D ++R++M G + G S
Sbjct: 706 FGNAEIGRYAAEMALLADPTDSGPYVLLSNIYASKGLWADVHNLRQQMDSSGTVKETGCS 765
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 113/243 (46%), Gaps = 5/243 (2%)
Query: 357 NALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVK 416
N L+ G+ G + DAR LF+ M R++ SW ++IS Y Q+ + + A+ LF A +
Sbjct: 57 NLLLRGYSNLGRLRDARHLFDRMPHRNLVSWGSVISMYTQHGRDDCAISLFVAFQKASCE 116
Query: 417 -PNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFE 475
PNE + SV A S + G H + + N + A+I++YAK G ++ A
Sbjct: 117 VPNEFLLASVLRACTQSKAVSLGEQVHGIAVKLDLDANVYVGTALINLYAKLGCMDEAML 176
Query: 476 VFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHA 535
VF+ + RT WN +I G A G + L+++ + ++ + +S C
Sbjct: 177 VFHALPVRTPVT--WNTVITGYAQIGCGGVALELFDRMGIEGVRPDRFVLASAVSACSAL 234
Query: 536 GLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGT 595
G ++ G R E D ++DL + +L A ++ M + ++V W T
Sbjct: 235 GFLE-GGRQIHGYAYRSATETDTSVINVLIDLYCKCSRLSAARKLFDCMEYR-NLVSWTT 292
Query: 596 LLA 598
+++
Sbjct: 293 MIS 295
>gi|224129622|ref|XP_002328762.1| predicted protein [Populus trichocarpa]
gi|222839060|gb|EEE77411.1| predicted protein [Populus trichocarpa]
Length = 632
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 164/470 (34%), Positives = 267/470 (56%), Gaps = 13/470 (2%)
Query: 203 CSSLVEARSLFDEMKERNIVSWN----VMLNGFAKAGL---VELARELFERIPSKDVVSW 255
C S+ + R ++ + S N ++N A+A + A +LF+ IP D +
Sbjct: 32 CQSMSQLRQYHSQIIRLGLSSHNHLIPPLINFCARASTSDALTYALKLFDSIPQPDAFLY 91
Query: 256 GTMIDGYLQVERL--SEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSII 313
T+I G+L + L + L +Y ML + + PN+ L+ AC + G+QIH+ +
Sbjct: 92 NTIIKGFLHSQLLPTNSILLLYSHMLQNSVLPNNFTFPSLLIACRKIQ---HGMQIHAHL 148
Query: 314 VKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDAR 373
K GF + ++IH Y + AR F SW +LI+G+ + G+I++A
Sbjct: 149 FKFGFGAHSVCLNSLIHMYVTFQALEEARRVFHTIPHPDSVSWTSLISGYSKWGLIDEAF 208
Query: 374 QLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGM-VDAGVKPNEITMVSVFCAIASS 432
+F M +++ SW+AM++ Y Q + + A LF M + ++ ++ A
Sbjct: 209 TIFQLMPQKNSASWNAMMAAYVQTNRFHEAFALFDRMKAENNNVLDKFVATTMLSACTGL 268
Query: 433 GTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNA 492
G L +G+W HEY+ N I L+ L+ AI+DMY KCG + A +VF+ + +S WN
Sbjct: 269 GALDQGKWIHEYIKRNGIELDSKLTTAIVDMYCKCGCLEKALQVFHSLPLPCRWISSWNC 328
Query: 493 IICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVY 552
+I GLAMHG+ ++++ ++E++ + + ITF+ +L+ C H+GLV+ G YF M VY
Sbjct: 329 MIGGLAMHGNGEAAIQLFKEMERQRVAPDDITFLNLLTACAHSGLVEEGRNYFSYMIRVY 388
Query: 553 NVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERA 612
+EP ++H+GCMVDLLGRAG + +A ++I MP+ DV + GTLL A + H N+E+GE
Sbjct: 389 GIEPRMEHFGCMVDLLGRAGMVPEARKLIDEMPVSPDVTVLGTLLGACKKHRNIELGEEI 448
Query: 613 AKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
+ + L+P++ VLL+N+YA+AG+WEDA +RK M D G+K+ PGFS
Sbjct: 449 GRRVIELEPNNSGRYVLLANLYANAGKWEDAAKVRKLMDDRGVKKAPGFS 498
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 129/555 (23%), Positives = 220/555 (39%), Gaps = 110/555 (19%)
Query: 38 AVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMIS 97
++SQ +Q HS I + GL S+ + LIN A+
Sbjct: 34 SMSQLRQYHSQIIRLGLSSHNHLIPPLINFCARAST------------------------ 69
Query: 98 GYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCW--REALEVFRDMRILGVIPNE 155
+D L A ++FD P Y ++I GF + L ++ M V+PN
Sbjct: 70 ----SDALTYALKLFDSIPQPDAFLYNTIIKGFLHSQLLPTNSILLLYSHMLQNSVLPNN 125
Query: 156 VTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDE 215
T S++ + I +H + K + +L++MY +L EAR +F
Sbjct: 126 FTFPSLL---IACRKIQHGMQIHAHLFKFGFGAHSVCLNSLIHMYVTFQALEEARRVFHT 182
Query: 216 MKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMY 275
+ + VSW +++G++K GL++ A +F+ +P K+ SW M+ Y+Q R EA ++
Sbjct: 183 IPHPDSVSWTSLISGYSKWGLIDEAFTIFQLMPQKNSASWNAMMAAYVQTNRFHEAFALF 242
Query: 276 RAMLCDGIAPNDVMI-VDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAA 334
M + D + ++SAC A +G IH I + G + + I+ Y
Sbjct: 243 DRMKAENNNVLDKFVATTMLSACTGLGALDQGKWIHEYIKRNGIELDSKLTTAIVDMYCK 302
Query: 335 CGRINLARLQFE-LGIKDH-IASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMIS 392
CG + A F L + I+SWN +I G +G E A QLF M+++
Sbjct: 303 CGCLEKALQVFHSLPLPCRWISSWNCMIGGLAMHGNGEAAIQLFKEMERQR--------- 353
Query: 393 GYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLN-NSIT 451
V P++IT +++ A A SG ++EGR Y++ I
Sbjct: 354 ----------------------VAPDDITFLNLLTACAHSGLVEEGRNYFSYMIRVYGIE 391
Query: 452 LNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYS 511
++D+ + G + A ++ + VSP
Sbjct: 392 PRMEHFGCMVDLLGRAGMVPEARKLIDEM-----PVSP---------------------- 424
Query: 512 DLEKRNIKLNSITFIGVLSTCCHAGL-VDLGERYFKSMKSVYNVEPDLK-HYGCMVDLLG 569
+T +G L C ++LGE + + V +EP+ Y + +L
Sbjct: 425 ----------DVTVLGTLLGACKKHRNIELGE---EIGRRVIELEPNNSGRYVLLANLYA 471
Query: 570 RAGQLEDAEEVIRSM 584
AG+ EDA +V + M
Sbjct: 472 NAGKWEDAAKVRKLM 486
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 112/249 (44%), Gaps = 34/249 (13%)
Query: 4 DHFH---SVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFI 60
+ FH ++F+ KA N + + L C+ A+ QG+ IH I ++G+E ++ +
Sbjct: 233 NRFHEAFALFDRMKAENNNVLDKFVATTMLSACTGLGALDQGKWIHEYIKRNGIELDSKL 292
Query: 61 QNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCC 120
+++++Y KCG + +A +F S P+ C +
Sbjct: 293 TTAIVDMYCKCGCLEKALQVFHSL----PLPC-------------------------RWI 323
Query: 121 VSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGL 180
S+ MI G A + A+++F++M V P+++T +++++ H G + E R
Sbjct: 324 SSWNCMIGGLAMHGNGEAAIQLFKEMERQRVAPDDITFLNLLTACAHSGLVEEGRNYFSY 383
Query: 181 VIKLM-IDGFVIISTNLLNMYCVCSSLVEARSLFDEMK-ERNIVSWNVMLNGFAKAGLVE 238
+I++ I+ + ++++ + EAR L DEM ++ +L K +E
Sbjct: 384 MIRVYGIEPRMEHFGCMVDLLGRAGMVPEARKLIDEMPVSPDVTVLGTLLGACKKHRNIE 443
Query: 239 LARELFERI 247
L E+ R+
Sbjct: 444 LGEEIGRRV 452
>gi|18398422|ref|NP_564401.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806407|sp|P0C7R0.1|PPR69_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g32415, mitochondrial; Flags: Precursor
gi|332193363|gb|AEE31484.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 761
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 206/678 (30%), Positives = 346/678 (51%), Gaps = 65/678 (9%)
Query: 39 VSQGQQIHSL-----IFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACN 93
+S+G +H+ I + G + SL++ YAK G + +A+ +F+ + V CN
Sbjct: 53 LSEGGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPERNIVTCN 112
Query: 94 IMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIP 153
M++GY++ R+N+A +F + P K VS+T M+ + +A+E+F +M P
Sbjct: 113 AMLTGYVKCRRMNEAWTLFREMP-KNVVSWTVMLTALCDDGRSEDAVELFDEM------P 165
Query: 154 --NEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARS 211
N V+ ++++ + G + + + V M V+ ++ Y + EA+
Sbjct: 166 ERNVVSWNTLVTGLIRNGDMEKAKQ----VFDAMPSRDVVSWNAMIKGYIENDGMEEAKL 221
Query: 212 LFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEA 271
LF +M E+N+V+W M+ G+ + G V A LF +P +++VSW MI G+ E EA
Sbjct: 222 LFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREA 281
Query: 272 LTMYRAML--CDGIAPNDVMIVDLISACGR-AMAFGE-GLQIHSIIVKAGFDCYDF---I 324
L ++ M D ++PN ++ L ACG + F G Q+H+ ++ G++ D +
Sbjct: 282 LMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRL 341
Query: 325 QATIIHFYAACGRI----NLARLQFEL---------------------------GIKDHI 353
+++H YA+ G I +L F+L + D +
Sbjct: 342 AKSLVHMYASSGLIASAQSLLNESFDLQSCNIIINRYLKNGDLERAETLFERVKSLHDKV 401
Query: 354 ASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDA 413
SW ++I G++ G + A LF + +D +W+ MISG QNE A L MV
Sbjct: 402 -SWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRC 460
Query: 414 GVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDN--LSAAIIDMYAKCGSIN 471
G+KP T + + ++ L +G+ H + + + + L +++ MYAKCG+I
Sbjct: 461 GLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIE 520
Query: 472 TAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLST 531
A+E+F + + T WN++I GL+ HG A+ L ++ ++ K NS+TF+GVLS
Sbjct: 521 DAYEIFAKMVQKDT--VSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSA 578
Query: 532 CCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVV 591
C H+GL+ G FK+MK Y+++P + HY M+DLLGRAG+L++AEE I ++P D
Sbjct: 579 CSHSGLITRGLELFKAMKETYSIQPGIDHYISMIDLLGRAGKLKEAEEFISALPFTPDHT 638
Query: 592 IWGTLLAASRIHGNVE----VGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIR 647
++G LL ++ + + ERAA L L P + P V L N+YA GR + +R
Sbjct: 639 VYGALLGLCGLNWRDKDAEGIAERAAMRLLELDPVNAPGHVALCNVYAGLGRHDMEKEMR 698
Query: 648 KEMRDCGMKRLPGFSGVV 665
KEM G+K+ PG S VV
Sbjct: 699 KEMGIKGVKKTPGCSWVV 716
>gi|225454898|ref|XP_002276015.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
mitochondrial-like [Vitis vinifera]
Length = 744
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 202/668 (30%), Positives = 332/668 (49%), Gaps = 102/668 (15%)
Query: 33 CSAHIAVSQGQQIHSLIFKSGLES-NTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVA 91
C+ V+ G+ IH L+ K GL S ++ + +S + +Y+KCG+
Sbjct: 143 CAELELVNYGRSIHGLVSKLGLFSGSSAVGSSFVYMYSKCGV------------------ 184
Query: 92 CNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILG- 150
L +A VFD+ + V++T++++G QN + LE +M +G
Sbjct: 185 -------------LEEAYGVFDEILFRDVVAWTALVIGCVQNGESKMGLECLCEMHRIGG 231
Query: 151 --VIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVE 208
PN TL + +LG + E R LHGLV+K +D ++ + LL+MY C + E
Sbjct: 232 DGERPNFRTLEGGFQACGNLGALLEGRCLHGLVVKTGMDYSQVVQSLLLSMYSKCGNPEE 291
Query: 209 ARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERL 268
A F E+ ++I+SW M++ +++ G W T
Sbjct: 292 AHRSFCEVLNKDIISWTSMISAYSRMG-------------------WAT----------- 321
Query: 269 SEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATI 328
E + M+ ML GI P+ ++I ++S+ +M E H +I++ + +Q +
Sbjct: 322 -ECIDMFWEMLVSGIYPDGIVISCMLSSFSNSMRVFEAKAFHGLIIRRHYTLDQMVQNAL 380
Query: 329 IHFYAACGRINLARLQFELGIKDHIASWNALIAGF-------------IRNGMIED---- 371
+ Y G + LA F + + +WN +++G+ I+N M E+
Sbjct: 381 LSMYCKFGFLKLAEKFFGRVNEQNFEAWNLMVSGYGATHLARSIHCYMIKNLMDENVSVN 440
Query: 372 ---------------ARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVK 416
AR++F + RD+ +W+ +IS YA AL L+ MV +K
Sbjct: 441 NSLIDMYGKSGNLTIARRIFCRI-PRDIVTWNTLISSYAHCGHFAEALSLYDKMVLEDLK 499
Query: 417 PNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEV 476
PN T+VSV A + +L+EG H Y+ N +++ A+IDMYAKCG + + E+
Sbjct: 500 PNSATLVSVLSACSHLASLEEGEKVHNYINGGKFEFNLSIATALIDMYAKCGQLEKSREI 559
Query: 477 FYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAG 536
F + +R V WN +I G MHGDA ++ + +E+ + K N +TF+ VLS C HAG
Sbjct: 560 FNSMHER--DVITWNVMISGYGMHGDARSAIEFFQQMEESSAKPNGLTFLAVLSACAHAG 617
Query: 537 LVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTL 596
LV G+ F M+ Y+V P+LKHY CMVDLLGR+G L++AE ++ SMP+ D +WG L
Sbjct: 618 LVKEGKYLFGKMQD-YSVAPNLKHYACMVDLLGRSGNLQEAEALVLSMPISPDGGVWGAL 676
Query: 597 LAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMK 656
L++ +IH +E+G R AK + V++SN+Y+ G+WE+A R M++ G++
Sbjct: 677 LSSCKIHNEIEMGIRIAKHAIDSDVENDGYYVMISNMYSSIGKWEEAEKARGIMKERGVR 736
Query: 657 RLPGFSGV 664
+ G+S V
Sbjct: 737 KKTGWSAV 744
Score = 172 bits (436), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 154/597 (25%), Positives = 255/597 (42%), Gaps = 101/597 (16%)
Query: 44 QIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRND 103
Q H+ I SG +N FI + LI+LYA S K SCST
Sbjct: 53 QSHAFIITSGYSNNIFIASKLISLYA-----SFHKP---SCST----------------- 87
Query: 104 RLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVIS 163
E+FD+ P + + S+I N + AL+ ++ MR +PN T+ +++
Sbjct: 88 ------ELFDEIPHRDAFLWNSIIKAHFSNGEYSRALDFYQWMRASEALPNHFTIPMIVA 141
Query: 164 SSVHLGGIWECRMLHGLVIKL-MIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIV 222
S L + R +HGLV KL + G + ++ + MY C L EA +FDE+ R++V
Sbjct: 142 SCAELELVNYGRSIHGLVSKLGLFSGSSAVGSSFVYMYSKCGVLEEAYGVFDEILFRDVV 201
Query: 223 SWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDG 282
+W ++ G + G + + +E L E M+R + DG
Sbjct: 202 AWTALVIGCVQNG------------------------ESKMGLECLCE---MHR-IGGDG 233
Query: 283 IAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLAR 342
PN + ACG A EG +H ++VK G D +Q+ ++ Y+ CG A
Sbjct: 234 ERPNFRTLEGGFQACGNLGALLEGRCLHGLVVKTGMDYSQVVQSLLLSMYSKCGNPEEAH 293
Query: 343 LQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYS----WSAMISGYAQNE 398
F + I SW ++I+ + R G + +F M +Y S M+S ++ N
Sbjct: 294 RSFCEVLNKDIISWTSMISAYSRMGWATECIDMFWEMLVSGIYPDGIVISCMLSSFS-NS 352
Query: 399 QPNMALELFHGMV-------DAGVKPNEITMVSVF----------------------CAI 429
+ FHG++ D V+ ++M F +
Sbjct: 353 MRVFEAKAFHGLIIRRHYTLDQMVQNALLSMYCKFGFLKLAEKFFGRVNEQNFEAWNLMV 412
Query: 430 ASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHI-RDRTTSVS 488
+ G R H Y++ N + N +++ ++IDMY K G++ A +F I RD T
Sbjct: 413 SGYGATHLARSIHCYMIKNLMDENVSVNNSLIDMYGKSGNLTIARRIFCRIPRDIVT--- 469
Query: 489 PWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSM 548
WN +I A G L +Y + ++K NS T + VLS C H ++ GE+ +
Sbjct: 470 -WNTLISSYAHCGHFAEALSLYDKMVLEDLKPNSATLVSVLSACSHLASLEEGEKVHNYI 528
Query: 549 KSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGN 605
E +L ++D+ + GQLE + E+ SM + DV+ W +++ +HG+
Sbjct: 529 NGG-KFEFNLSIATALIDMYAKCGQLEKSREIFNSMHER-DVITWNVMISGYGMHGD 583
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 72/155 (46%), Gaps = 31/155 (20%)
Query: 25 ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSC 84
LVS L CS ++ +G+++H+ I E N I +LI++YAKCG + +++ +F+S
Sbjct: 504 TLVSVLSACSHLASLEEGEKVHNYINGGKFEFNLSIATALIDMYAKCGQLEKSREIFNSM 563
Query: 85 STLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFR 144
D + N+MISGY + DA R A+E F+
Sbjct: 564 HERDVITWNVMISGYGMH---GDA----------------------------RSAIEFFQ 592
Query: 145 DMRILGVIPNEVTLASVISSSVHLGGIWECRMLHG 179
M PN +T +V+S+ H G + E + L G
Sbjct: 593 QMEESSAKPNGLTFLAVLSACAHAGLVKEGKYLFG 627
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 63/308 (20%), Positives = 128/308 (41%), Gaps = 61/308 (19%)
Query: 307 LQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRN 366
LQ H+ I+ +G+ FI + +I YA+ + +
Sbjct: 52 LQSHAFIITSGYSNNIFIASKLISLYASFHKPSC-------------------------- 85
Query: 367 GMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVF 426
+ +LF+ + RD + W+++I + N + + AL+ + M + PN T+ +
Sbjct: 86 -----STELFDEIPHRDAFLWNSIIKAHFSNGEYSRALDFYQWMRASEALPNHFTIPMIV 140
Query: 427 CAIASSGTLKEGRWAHEYVLNNSI-TLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTT 485
+ A + GR H V + + + + ++ + MY+KCG + A+ VF I R
Sbjct: 141 ASCAELELVNYGRSIHGLVSKLGLFSGSSAVGSSFVYMYSKCGVLEEAYGVFDEILFR-- 198
Query: 486 SVSPWNAIICGLAMHGDANLTL-------KIYSDLEKRNIKLNSITF-----IGVL--ST 531
V W A++ G +G++ + L +I D E+ N + F +G L
Sbjct: 199 DVVAWTALVIGCVQNGESKMGLECLCEMHRIGGDGERPNFRTLEGGFQACGNLGALLEGR 258
Query: 532 CCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVV 591
C H +V G Y + ++S+ ++ + + G E+A + + D++
Sbjct: 259 CLHGLVVKTGMDYSQVVQSL------------LLSMYSKCGNPEEAHRSFCEV-LNKDII 305
Query: 592 IWGTLLAA 599
W ++++A
Sbjct: 306 SWTSMISA 313
Score = 39.7 bits (91), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 79/183 (43%), Gaps = 17/183 (9%)
Query: 434 TLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAI 493
+LK +H +++ + + N +++ +I +YA + + E+F I R + WN+I
Sbjct: 47 SLKTLLQSHAFIITSGYSNNIFIASKLISLYASFHKPSCSTELFDEIPHRDAFL--WNSI 104
Query: 494 ICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYN 553
I +G+ + L Y + N T ++++C LV+ G +S++
Sbjct: 105 IKAHFSNGEYSRALDFYQWMRASEALPNHFTIPMIVASCAELELVNYG-------RSIHG 157
Query: 554 VEPDLKHY-------GCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNV 606
+ L + V + + G LE+A V + + DVV W L+ +G
Sbjct: 158 LVSKLGLFSGSSAVGSSFVYMYSKCGVLEEAYGVFDEILFR-DVVAWTALVIGCVQNGES 216
Query: 607 EVG 609
++G
Sbjct: 217 KMG 219
>gi|359486639|ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g39620-like [Vitis vinifera]
Length = 1005
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 196/644 (30%), Positives = 319/644 (49%), Gaps = 98/644 (15%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
+++ VSA + I + +G++IH + ++S+ + L+ +YAKCG +AK +F
Sbjct: 329 KVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFW 388
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
D VA ++++I Q EAL +
Sbjct: 389 GLQGRDLVA-------------------------------WSAIIAALVQTGYPEEALSL 417
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
F++M+ + PN VTL S++ + L + + +H +K +D + T L++MY
Sbjct: 418 FQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAK 477
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
C A + F+ M R+IV+WN ++NG+A+ G D Y
Sbjct: 478 CGFFTAALTTFNRMSSRDIVTWNSLINGYAQIG------------------------DPY 513
Query: 263 LQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD 322
A+ M+ + I P+ +V ++ AC +G IH +IVK GF+
Sbjct: 514 -------NAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDC 566
Query: 323 FIQATIIHFYAACGRINLARLQFELG--IKDHIASWNALIAGFIRNGMIEDARQLFNNMQ 380
++ +I YA CG + A F KD + +WN +IA +++NG ++A
Sbjct: 567 HVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEV-TWNVIIAAYMQNGHAKEA-------- 617
Query: 381 KRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRW 440
IS + Q M LE FH PN +T VSV A A +EG
Sbjct: 618 ----------ISSFHQ-----MRLENFH--------PNSVTFVSVLPAAAYLAAFREGMA 654
Query: 441 AHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMH 500
H ++ N + ++IDMYAKCG ++ + ++F + D +VS WNA++ G A+H
Sbjct: 655 FHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEM-DHKDTVS-WNAMLSGYAVH 712
Query: 501 GDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKH 560
G + + ++S +++ ++++S++F+ VLS C HAGLV+ G + F SM Y+++PDL+H
Sbjct: 713 GHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHAGLVEEGRKIFHSMSDKYHIKPDLEH 772
Query: 561 YGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQ 620
Y CMVDLLGRAG ++ I+ MP++ D +WG LL + R+H NV++GE A L L+
Sbjct: 773 YACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLE 832
Query: 621 PSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
P + V+LS+IYA +GRW DA R +M D G+K+ PG S V
Sbjct: 833 PRNPAHFVVLSSIYAQSGRWADAGKARSKMNDLGLKKTPGCSWV 876
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 153/602 (25%), Positives = 248/602 (41%), Gaps = 122/602 (20%)
Query: 17 LQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQ 76
L+ Y V L+ C+ + + +G H I + GLE + FI L+++Y+K G
Sbjct: 125 LEPDKYTFTFV--LKACTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMG---- 178
Query: 77 AKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCW 136
L AREVFDK P + V++ +MI G +Q++
Sbjct: 179 ---------------------------DLKRAREVFDKMPKRDVVAWNAMIAGLSQSEDP 211
Query: 137 REALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNL 196
EA++ FR M+++GV P+ V+L ++ L I CR +HG V + D +S L
Sbjct: 212 CEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRR--DFSSAVSNGL 269
Query: 197 LNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWG 256
+++Y C G V++AR +F+++ +D VSWG
Sbjct: 270 IDLYSKC-------------------------------GDVDVARRVFDQMVDQDDVSWG 298
Query: 257 TMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKA 316
TM+ GY E L ++ M + N V V A + +G +IH ++
Sbjct: 299 TMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQ 358
Query: 317 GFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLF 376
D + ++ YA CG E A+QLF
Sbjct: 359 RIDSDILVATPLMVMYAKCGET-------------------------------EKAKQLF 387
Query: 377 NNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLK 436
+Q RD+ +WSA+I+ Q P AL LF M + +KPN +T++S+ A A LK
Sbjct: 388 WGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLK 447
Query: 437 EGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICG 496
G+ H + + + + + A++ MYAKCG A F + R + WN++I G
Sbjct: 448 LGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSR--DIVTWNSLING 505
Query: 497 LAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLS-----------TCCHAGLVDLGERYF 545
A GD + ++ L I ++ T +GV+ TC H +V LG
Sbjct: 506 YAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLG---- 561
Query: 546 KSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGN 605
E D ++D+ + G L AE + D V W ++AA +G+
Sbjct: 562 --------FESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGH 613
Query: 606 VE 607
+
Sbjct: 614 AK 615
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 134/567 (23%), Positives = 235/567 (41%), Gaps = 105/567 (18%)
Query: 44 QIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRND 103
QIH+ I SG + + I + LINLY S+F C
Sbjct: 50 QIHAQIIVSGFKHHHSITH-LINLY----------SLFHKCDL----------------- 81
Query: 104 RLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVIS 163
AR VFD TP + + SMI + ++ + EALE++ M G+ P++ T V+
Sbjct: 82 ----ARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLK 137
Query: 164 SSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVS 223
+ + E HG + + ++ V I L++MY L AR +FD+M +R++V+
Sbjct: 138 ACTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVA 197
Query: 224 WNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGI 283
WN M+ G + Q E EA+ +R+M G+
Sbjct: 198 WNAMIAGLS-------------------------------QSEDPCEAVDFFRSMQLVGV 226
Query: 284 APNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARL 343
P+ V +++L + IH + + F + +I Y+ CG +++AR
Sbjct: 227 EPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFS--SAVSNGLIDLYSKCGDVDVARR 284
Query: 344 QFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMA 403
F+ + SW ++AG+ NG +
Sbjct: 285 VFDQMVDQDDVSWGTMMAGYAHNGCFVE-------------------------------V 313
Query: 404 LELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDM 463
LELF M V+ N+++ VS F A A + L++G+ H L I + ++ ++ M
Sbjct: 314 LELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVM 373
Query: 464 YAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSI 523
YAKCG A ++F+ ++ R + W+AII L G L ++ +++ + +K N +
Sbjct: 374 YAKCGETEKAKQLFWGLQGR--DLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRV 431
Query: 524 TFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRS 583
T + +L C L+ LG + +++ DL +V + + G A
Sbjct: 432 TLMSILPACADLSLLKLG-KSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNR 490
Query: 584 MPMKADVVIWGTLLAASRIHGNVEVGE 610
M + D+V W +L I+G ++G+
Sbjct: 491 MSSR-DIVTWNSL-----INGYAQIGD 511
>gi|115477124|ref|NP_001062158.1| Os08g0500600 [Oryza sativa Japonica Group]
gi|42407356|dbj|BAD08817.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|42407750|dbj|BAD08896.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113624127|dbj|BAF24072.1| Os08g0500600 [Oryza sativa Japonica Group]
Length = 429
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 175/443 (39%), Positives = 261/443 (58%), Gaps = 44/443 (9%)
Query: 220 NIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAML 279
++VSWN ++ G+ K G +E A+ +F+ +P ++ VSW TM+ GY L A M+
Sbjct: 23 DVVSWNTVIGGYVKCGEMESAKRVFDEMPRRNGVSWSTMVGGYAAAGELDVAREMF---- 78
Query: 280 CDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRIN 339
D + A GR + +++ +A G +
Sbjct: 79 ------------DRMPAIGRNV---------------------VTWNSMVTGFARHGLLP 105
Query: 340 LARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQ 399
LAR F+ ++ SWNA++ G+ N ++ AR+LF+ M ++DV SW+ MISGYAQ +
Sbjct: 106 LARKMFDEMPVRNLVSWNAMLRGYSVNSDMDGARELFDVMPEKDVVSWTCMISGYAQAGR 165
Query: 400 PNMALELFHGM-VDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLND--NL 456
LELF M ++ V+PNE+TMVSV A A+ L+EGRW H ++ + + LN+ NL
Sbjct: 166 YQDTLELFRAMQTESNVQPNEVTMVSVLSACANLTALEEGRWVHAFIDKHKMVLNNEYNL 225
Query: 457 SAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKR 516
AA+IDMYAKCG + A ++F + DR +VS WNA+I LAM+G+A ++ + +++
Sbjct: 226 GAALIDMYAKCGRTDIAVKIFNSL-DRK-NVSAWNALITRLAMNGNARDSVDAFEQMKRT 283
Query: 517 NIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLED 576
K N ITF+GVL+ C H GLVD G R F+SM S V+P++KHYGCMVD+LGRAG LE+
Sbjct: 284 GEKPNDITFVGVLTACSHGGLVDEGRRCFQSMASTCGVQPEVKHYGCMVDMLGRAGLLEE 343
Query: 577 AEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPS--RVLLSNIY 634
AEE+IRSMPM DV+++G LL A R+H +V ER + L + S VL+S+IY
Sbjct: 344 AEELIRSMPMAPDVMVFGALLGACRMHKRFDVAERVQSEIHSLNLNAQQSGCHVLISDIY 403
Query: 635 ADAGRWEDAFSIRKEMRDCGMKR 657
A AG+W D R+ ++ G+++
Sbjct: 404 AAAGKWFDVLEARQVVQRSGIRK 426
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 131/460 (28%), Positives = 210/460 (45%), Gaps = 87/460 (18%)
Query: 72 GLISQAKSM---FDSCSTL-DPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMI 127
G + A SM F SC+ + D V+ N +I GY++ + A+ VFD+ P + VS+++M+
Sbjct: 3 GALRDAASMREVFGSCAGVADVVSWNTVIGGYVKCGEMESAKRVFDEMPRRNGVSWSTMV 62
Query: 128 MGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMID 187
G+A A E+F M +G N VT S+++ HGL
Sbjct: 63 GGYAAAGELDVAREMFDRMPAIG--RNVVTWNSMVTGFAR----------HGL------- 103
Query: 188 GFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERI 247
L AR +FDEM RN+VSWN ML G++ ++ ARELF+ +
Sbjct: 104 ------------------LPLARKMFDEMPVRNLVSWNAMLRGYSVNSDMDGARELFDVM 145
Query: 248 PSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDG-IAPNDVMIVDLISACGRAMAFGEG 306
P KDVVSW MI GY Q R + L ++RAM + + PN+V +V ++SAC A EG
Sbjct: 146 PEKDVVSWTCMISGYAQAGRYQDTLELFRAMQTESNVQPNEVTMVSVLSACANLTALEEG 205
Query: 307 LQIHSIIVKAGF---DCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGF 363
+H+ I K + Y+ + A +I YA CGR ++A F + ++++WNALI
Sbjct: 206 RWVHAFIDKHKMVLNNEYN-LGAALIDMYAKCGRTDIAVKIFNSLDRKNVSAWNALITRL 264
Query: 364 IRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMV 423
NG D+ F M++ G KPN+IT V
Sbjct: 265 AMNGNARDSVDAFEQMKR-------------------------------TGEKPNDITFV 293
Query: 424 SVFCAIASSGTLKEGRWAHEYVLNN-SITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRD 482
V A + G + EGR + + + + ++DM + G + A E+
Sbjct: 294 GVLTACSHGGLVDEGRRCFQSMASTCGVQPEVKHYGCMVDMLGRAGLLEEAEELI----- 348
Query: 483 RTTSVSP----WNAIICGLAMHGDANLTLKIYSDLEKRNI 518
R+ ++P + A++ MH ++ ++ S++ N+
Sbjct: 349 RSMPMAPDVMVFGALLGACRMHKRFDVAERVQSEIHSLNL 388
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 150/326 (46%), Gaps = 64/326 (19%)
Query: 57 NTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTP 116
N NS++ +A+ GL+ A+ MFD + V+ N M+ GY N ++ ARE+FD P
Sbjct: 87 NVVTWNSMVTGFARHGLLPLARKMFDEMPVRNLVSWNAMLRGYSVNSDMDGARELFDVMP 146
Query: 117 IKCCVSYTSMIMGFAQNDCWREALEVFRDMRI-LGVIPNEVTLASVISSSVHLGGIWECR 175
K VS+T MI G+AQ +++ LE+FR M+ V PNEVT+ SV+S+ +L + E R
Sbjct: 147 EKDVVSWTCMISGYAQAGRYQDTLELFRAMQTESNVQPNEVTMVSVLSACANLTALEEGR 206
Query: 176 MLHGLVI--KLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAK 233
+H + K++++ + L++MY C A +F+ + +N+ +WN ++ A
Sbjct: 207 WVHAFIDKHKMVLNNEYNLGAALIDMYAKCGRTDIAVKIFNSLDRKNVSAWNALITRLAM 266
Query: 234 AGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDL 293
G ++D V D + Q++R E PND+ V +
Sbjct: 267 NG------------NARDSV------DAFEQMKRTGE-------------KPNDITFVGV 295
Query: 294 ISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHI 353
++AC H +V G C+ + +T G++ +
Sbjct: 296 LTACS-----------HGGLVDEGRRCFQSMASTC-------------------GVQPEV 325
Query: 354 ASWNALIAGFIRNGMIEDARQLFNNM 379
+ ++ R G++E+A +L +M
Sbjct: 326 KHYGCMVDMLGRAGLLEEAEELIRSM 351
>gi|449462338|ref|XP_004148898.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Cucumis sativus]
Length = 675
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 198/615 (32%), Positives = 320/615 (52%), Gaps = 41/615 (6%)
Query: 56 SNTFIQNSLINLYAKCGLISQAKSM--FDSCSTL----DPVACNIMISGYIRNDRLNDAR 109
SN FI N + + C + Q K + +C+ L P + + + ++ A
Sbjct: 47 SNVFISNPTLLILQSCSSMFQLKQIQAHITCTGLMNQIFPASRLLAFCALSDSGDIHYAH 106
Query: 110 EVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLG 169
+FD+T + C + +MI G+ + + FR M I N S +
Sbjct: 107 LIFDQTELPNCFFWNTMIKGYCKANHPSMGFSFFRQM-----IRNRAEF----DSGSFVF 157
Query: 170 GIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLN 229
+ C ++ + + S++ R + ++ N ++
Sbjct: 158 ALKACGQFAEKIVGMAVH-----------------SVIWKRGF-----DSDLFVQNGLIQ 195
Query: 230 GFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVM 289
+ + G + AR++F+ KDVV+W TMI+GY + L EA+ ++ +ML + PN+V
Sbjct: 196 NYVETGCLGFARQMFDESSVKDVVTWTTMINGYARNNWLDEAIALFNSMLSSDVKPNEVT 255
Query: 290 IVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGI 349
++ L+SAC + G +H I + C + ++ Y CG + AR F
Sbjct: 256 MIALLSACSQKGDSEMGKTLHEHIRRKDITCSLNLLNAMLDMYVKCGCLTTAREIFNNME 315
Query: 350 KDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHG 409
+ + SW +L+ G+ +NG + AR+LF+ M +R++ SW+AMI+GY+QN QP ALELFH
Sbjct: 316 RRDVFSWTSLLNGYAKNGDLGSARKLFDEMPERNIVSWNAMIAGYSQNSQPMEALELFHN 375
Query: 410 MVDA-GVKPNEITMVSVFCAIASSGTLKEGRWAH-EYVLNNSITLNDNLSAAIIDMYAKC 467
MVD G+ P E T+V V A G L+ G+ H +V I ++ L A++DMYAKC
Sbjct: 376 MVDVVGLVPTEDTLVCVLSASGQLGCLEMGQEIHCNHVNKIGIQVSLILKNAVMDMYAKC 435
Query: 468 GSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIG 527
GSI+ A ++F+ + ++ ++ WN++I A +G A L ++ + +K + ITFIG
Sbjct: 436 GSIDAAAKLFHSMPEK--NLVSWNSMISAYASYGHAKKALTLFDQMIGSGLKPDHITFIG 493
Query: 528 VLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMK 587
VLS C + G V G+ +F+SM++ + VEP +HY CMVDLL R G L++A E+I MPM+
Sbjct: 494 VLSACSYGGFVSEGQAHFESMENCFGVEPKREHYACMVDLLSRVGLLKEAYELISRMPME 553
Query: 588 ADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIR 647
A WG LL A R HGNVE+ + A + L L P LL+NI AD +W+D +R
Sbjct: 554 ASEGGWGALLDACRKHGNVEMAKLAGEKLLELDPEDSGIYSLLANICADGKKWKDVRMVR 613
Query: 648 KEMRDCGMKRLPGFS 662
+ MR+ G+K++PG S
Sbjct: 614 RMMRERGVKKVPGHS 628
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 135/485 (27%), Positives = 223/485 (45%), Gaps = 68/485 (14%)
Query: 25 ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSC 84
+ V AL+ C G +HS+I+K G +S+ F+QN LI Y + G + A+ MFD
Sbjct: 154 SFVFALKACGQFAEKIVGMAVHSVIWKRGFDSDLFVQNGLIQNYVETGCLGFARQMFDES 213
Query: 85 STLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFR 144
S D V MI+GY RN+ L+ EA+ +F
Sbjct: 214 SVKDVVTWTTMINGYARNNWLD-------------------------------EAIALFN 242
Query: 145 DMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCS 204
M V PNEVT+ +++S+ G + LH + + I + + +L+MY C
Sbjct: 243 SMLSSDVKPNEVTMIALLSACSQKGDSEMGKTLHEHIRRKDITCSLNLLNAMLDMYVKCG 302
Query: 205 SLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQ 264
L AR +F+ M+ R++ SW +LNG+AK G + AR+LF+ +P +++VSW MI GY Q
Sbjct: 303 CLTTAREIFNNMERRDVFSWTSLLNGYAKNGDLGSARKLFDEMPERNIVSWNAMIAGYSQ 362
Query: 265 VERLSEALTMYRAML-CDGIAPNDVMIVDLISACGRAMAFGEGLQIH-SIIVKAGFDCYD 322
+ EAL ++ M+ G+ P + +V ++SA G+ G +IH + + K G
Sbjct: 363 NSQPMEALELFHNMVDVVGLVPTEDTLVCVLSASGQLGCLEMGQEIHCNHVNKIGIQVSL 422
Query: 323 FIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKR 382
++ ++ YA CG I+ A F + ++ SWN++I
Sbjct: 423 ILKNAVMDMYAKCGSIDAAAKLFHSMPEKNLVSWNSMI---------------------- 460
Query: 383 DVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAH 442
S YA AL LF M+ +G+KP+ IT + V A + G + EG+ AH
Sbjct: 461 ---------SAYASYGHAKKALTLFDQMIGSGLKPDHITFIGVLSACSYGGFVSEGQ-AH 510
Query: 443 EYVLNNSITLNDNLS--AAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMH 500
+ N + A ++D+ ++ G + A+E+ + S W A++ H
Sbjct: 511 FESMENCFGVEPKREHYACMVDLLSRVGLLKEAYELISRM-PMEASEGGWGALLDACRKH 569
Query: 501 GDANL 505
G+ +
Sbjct: 570 GNVEM 574
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 101/382 (26%), Positives = 190/382 (49%), Gaps = 50/382 (13%)
Query: 3 LDHFHSVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQN 62
LD ++FNS ++ + E+ +++ L CS G+ +H I + + + + N
Sbjct: 234 LDEAIALFNSMLSSDVKPN-EVTMIALLSACSQKGDSEMGKTLHEHIRRKDITCSLNLLN 292
Query: 63 SLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVS 122
+++++Y KCG ++ A+ +F++ D + +++GY +N L AR++FD+ P + VS
Sbjct: 293 AMLDMYVKCGCLTTAREIFNNMERRDVFSWTSLLNGYAKNGDLGSARKLFDEMPERNIVS 352
Query: 123 YTSMIMGFAQNDCWREALEVFRDM-RILGVIPNEVTLASVISSSVHLGGIWECRMLH-GL 180
+ +MI G++QN EALE+F +M ++G++P E TL V+S+S LG + + +H
Sbjct: 353 WNAMIAGYSQNSQPMEALELFHNMVDVVGLVPTEDTLVCVLSASGQLGCLEMGQEIHCNH 412
Query: 181 VIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELA 240
V K+ I +I+ +++MY C S+ A LF M E+N+VSWN M++ +A G
Sbjct: 413 VNKIGIQVSLILKNAVMDMYAKCGSIDAAAKLFHSMPEKNLVSWNSMISAYASYG----- 467
Query: 241 RELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRA 300
+ALT++ M+ G+ P+ + + ++SAC
Sbjct: 468 --------------------------HAKKALTLFDQMIGSGLKPDHITFIGVLSACSYG 501
Query: 301 MAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAAC-----GRINLARLQFEL----GIKD 351
EG Q H ++ +C+ ++ H+ AC R+ L + +EL ++
Sbjct: 502 GFVSEG-QAH---FESMENCFG-VEPKREHY--ACMVDLLSRVGLLKEAYELISRMPMEA 554
Query: 352 HIASWNALIAGFIRNGMIEDAR 373
W AL+ ++G +E A+
Sbjct: 555 SEGGWGALLDACRKHGNVEMAK 576
>gi|224107052|ref|XP_002333576.1| predicted protein [Populus trichocarpa]
gi|222837227|gb|EEE75606.1| predicted protein [Populus trichocarpa]
Length = 781
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 209/648 (32%), Positives = 325/648 (50%), Gaps = 99/648 (15%)
Query: 23 ELALVSALRYCS-AHIAVSQGQQIHSLIFKSGL-ESNTFIQNSLINLYAKCGLISQAKSM 80
A SA+R C + + +G+Q+H ++GL ++ + N LIN+YAKCG I A+S+
Sbjct: 101 RFAFGSAIRACQESMLWRRKGRQVHGYAIRTGLNDAKVAVGNGLINMYAKCGDIDHARSV 160
Query: 81 FDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREAL 140
F +M+ K VS+ SMI G QN C+ +A+
Sbjct: 161 F-----------GLMVD--------------------KDSVSWNSMITGLDQNKCFEDAV 189
Query: 141 EVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMY 200
+ + MR G++P+ L S +SS LG I + HG IKL +D V +S LL +Y
Sbjct: 190 KSYNSMRKTGLMPSNFALISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALY 249
Query: 201 CVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMID 260
S L E + +F M ER+ VSWN ++ A +G
Sbjct: 250 AETSRLAECQKVFSWMLERDQVSWNTVIGALADSG------------------------- 284
Query: 261 GYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDC 320
+SEA+ ++ M+ G +PN V ++L++ QIH++I+K
Sbjct: 285 -----ASVSEAIEVFLEMMRAGWSPNRVTFINLLATVSSLSTSKLSHQIHALILK----- 334
Query: 321 YDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNM- 379
+KD A NAL+A + ++G +E+ ++F+ M
Sbjct: 335 --------------------------YNVKDDNAIENALLACYGKSGEMENCEEIFSRMS 368
Query: 380 QKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGR 439
++RD SW++MISGY NE A++L M+ G + + T +V A A+ TL+ G
Sbjct: 369 ERRDEVSWNSMISGYIHNELLCKAMDLVWLMMQRGQRLDCFTFATVLSACATVATLECGM 428
Query: 440 WAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAM 499
H + + + + +A++DMY+KCG I+ A F + R ++ WN++I G A
Sbjct: 429 EVHACAIRACLESDVVIGSALVDMYSKCGRIDYASRFFNLMPVR--NLYSWNSMISGYAR 486
Query: 500 HGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLK 559
HG + L++++ ++ + ITF+GVLS C H GLVD G YFKSM VY + P ++
Sbjct: 487 HGHGDNALRLFTRMKLSGQLPDHITFVGVLSACSHIGLVDEGFEYFKSMTEVYGLVPRVE 546
Query: 560 HYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAA-SRIHG-NVEVGERAAKSLA 617
HY CMVDLLGRAG+L+ E I MP+K +++IW T+L A R +G E+G RAA+ L
Sbjct: 547 HYSCMVDLLGRAGELDKIENFINKMPIKPNILIWRTVLGACCRGNGRKTELGRRAAEMLF 606
Query: 618 GLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGVV 665
+ P + + VLLSN+YA G+WED R+ MR+ +K+ G S V
Sbjct: 607 NMDPQNAVNYVLLSNMYASGGKWEDMARTRRAMREAAVKKEAGCSWVT 654
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 98/427 (22%), Positives = 185/427 (43%), Gaps = 68/427 (15%)
Query: 176 MLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAG 235
+ H V+K D + + L+N+Y V AR LFDEM +RN V+W +++G+ + G
Sbjct: 21 LFHLNVLKHGFDSDLFLCNTLINVYVRIGDCVSARKLFDEMPDRNGVTWACLISGYTQNG 80
Query: 236 LVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLIS 295
+ E +A + + M+ +G PN I
Sbjct: 81 MPE-------------------------------DACGVLKEMIFEGFLPNRFAFGSAIR 109
Query: 296 ACGRAMAF-GEGLQIHSIIVKAGF-DCYDFIQATIIHFYAACGRINLARLQFELGIKDHI 353
AC +M + +G Q+H ++ G D + +I+ YA CG I+ AR F L +
Sbjct: 110 ACQESMLWRRKGRQVHGYAIRTGLNDAKVAVGNGLINMYAKCGDIDHARSVFGLMVDKDS 169
Query: 354 ASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDA 413
SWN++I G +N EDA + +N+M+K
Sbjct: 170 VSWNSMITGLDQNKCFEDAVKSYNSMRK-------------------------------T 198
Query: 414 GVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTA 473
G+ P+ ++S + AS G + G+ H + + ++ ++S ++ +YA+ +
Sbjct: 199 GLMPSNFALISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETSRLAEC 258
Query: 474 FEVFYHIRDRTTSVSPWNAIICGLAMHG-DANLTLKIYSDLEKRNIKLNSITFIGVLSTC 532
+VF + +R WN +I LA G + ++++ ++ + N +TFI +L+T
Sbjct: 259 QKVFSWMLERDQ--VSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFINLLATV 316
Query: 533 CHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVI 592
L + ++ YNV+ D ++ G++G++E+ EE+ M + D V
Sbjct: 317 SSLSTSKLSHQ-IHALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERRDEVS 375
Query: 593 WGTLLAA 599
W ++++
Sbjct: 376 WNSMISG 382
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 130/585 (22%), Positives = 224/585 (38%), Gaps = 136/585 (23%)
Query: 4 DHFHSVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNS 63
D S + +K L S++ AL+SAL C++ + GQQ H K GL+ + + N+
Sbjct: 187 DAVKSYNSMRKTGLMPSNF--ALISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNT 244
Query: 64 LINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSY 123
L+ LYA+ +++ + +F D V+ N +I L D+
Sbjct: 245 LLALYAETSRLAECQKVFSWMLERDQVSWNTVIGA------LADSGASVS---------- 288
Query: 124 TSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIK 183
EA+EVF +M G PN VT +++++ L +H L++K
Sbjct: 289 --------------EAIEVFLEMMRAGWSPNRVTFINLLATVSSLSTSKLSHQIHALILK 334
Query: 184 LMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKE-RNIVSWNVMLNGFAKAGLVELARE 242
+ I LL Y + +F M E R+ VSWN
Sbjct: 335 YNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERRDEVSWN----------------- 377
Query: 243 LFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMA 302
+MI GY+ E L +A+ + M+ G + ++SAC
Sbjct: 378 --------------SMISGYIHNELLCKAMDLVWLMMQRGQRLDCFTFATVLSACATVAT 423
Query: 303 FGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAG 362
G+++H+ ++A + I + ++ Y+ CGRI+ A F L ++ SWN++I+G
Sbjct: 424 LECGMEVHACAIRACLESDVVIGSALVDMYSKCGRIDYASRFFNLMPVRNLYSWNSMISG 483
Query: 363 FIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITM 422
+ R+G ++A +LF M+ +G P+ IT
Sbjct: 484 YARHGHGDNALRLFTRMKL-------------------------------SGQLPDHITF 512
Query: 423 VSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRD 482
V V A + G + EG FE F + +
Sbjct: 513 VGVLSACSHIGLVDEG-----------------------------------FEYFKSMTE 537
Query: 483 RTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAG--LVDL 540
V C + + G A KI + + K IK N + + VL CC +L
Sbjct: 538 VYGLVPRVEHYSCMVDLLGRAGELDKIENFINKMPIKPNILIWRTVLGACCRGNGRKTEL 597
Query: 541 GERYFKSMKSVYNVEP-DLKHYGCMVDLLGRAGQLEDAEEVIRSM 584
G R + + ++N++P + +Y + ++ G+ ED R+M
Sbjct: 598 GRR---AAEMLFNMDPQNAVNYVLLSNMYASGGKWEDMARTRRAM 639
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 116/478 (24%), Positives = 194/478 (40%), Gaps = 81/478 (16%)
Query: 43 QQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCST-LDPVACNIMISGYIR 101
QIH+LI K ++ + I+N+L+ Y K G + + +F S D V+ N MISGYI
Sbjct: 326 HQIHALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSERRDEVSWNSMISGYIH 385
Query: 102 NDRLNDAREVFDKTPIKCCVSYTSMIMGFAQN-DCWREALEVFRDMRILGVIPNEVTLAS 160
N+ L A ++ ++M Q DC+ T A+
Sbjct: 386 NELLCKAMDL------------VWLMMQRGQRLDCF--------------------TFAT 413
Query: 161 VISSSVHLGGIWECRM-LHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKER 219
V+S+ + + EC M +H I+ ++ V+I + L++MY C + A F+ M R
Sbjct: 414 VLSACATVATL-ECGMEVHACAIRACLESDVVIGSALVDMYSKCGRIDYASRFFNLMPVR 472
Query: 220 NIVSWNVMLNGFAKAGLVELARELFERIPSK----DVVSWGTMIDGYLQVERLSEALTMY 275
N+ SWN M++G+A+ G + A LF R+ D +++ ++ + + E +
Sbjct: 473 NLYSWNSMISGYARHGHGDNALRLFTRMKLSGQLPDHITFVGVLSACSHIGLVDEGFEYF 532
Query: 276 RAML-CDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAA 334
++M G+ P ++ GRA GE +I + I K I T++ A
Sbjct: 533 KSMTEVYGLVPRVEHYSCMVDLLGRA---GELDKIENFINKMPIKPNILIWRTVL---GA 586
Query: 335 CGRIN---------LARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVY 385
C R N A + F + ++ + ++ L + G ED + M++ V
Sbjct: 587 CCRGNGRKTELGRRAAEMLFNMDPQNAV-NYVLLSNMYASGGKWEDMARTRRAMREAAVK 645
Query: 386 -----SWSAMISGY-----AQNEQPNMAL------ELFHGMVDAGVKPNEITMVSVFCAI 429
SW M G N P L EL + DAG P +I
Sbjct: 646 KEAGCSWVTMKDGVHVFVAGDNSHPEKGLIYAKLKELDKKIRDAGYVP-QIKFALYDLEP 704
Query: 430 ASSGTL---KEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRT 484
+ L + A +VL T N L I+ CG ++AF+ + DR+
Sbjct: 705 ENKEELLSYHSEKLAVAFVL----TRNSGLPIRIMKNLRVCGDCHSAFKYISKVVDRS 758
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/253 (21%), Positives = 109/253 (43%), Gaps = 18/253 (7%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+ L C+ + G ++H+ ++ LES+ I ++L+++Y+KCG I A F+
Sbjct: 409 FTFATVLSACATVATLECGMEVHACAIRACLESDVVIGSALVDMYSKCGRIDYASRFFNL 468
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCC----VSYTSMIMGFAQNDCWREA 139
+ + N MISGY R+ ++A +F + + +++ ++ + E
Sbjct: 469 MPVRNLYSWNSMISGYARHGHGDNALRLFTRMKLSGQLPDHITFVGVLSACSHIGLVDEG 528
Query: 140 LEVFRDM-RILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLN 198
E F+ M + G++P + ++ LG E + + K+ I ++I +L
Sbjct: 529 FEYFKSMTEVYGLVPRVEHYSCMVDL---LGRAGELDKIENFINKMPIKPNILIWRTVLG 585
Query: 199 MYCVCSSLV-----EARSLFDEMKERNIVSWNVMLNGFAKAG----LVELARELFERIPS 249
C + A + M +N V++ ++ N +A G + R + E
Sbjct: 586 ACCRGNGRKTELGRRAAEMLFNMDPQNAVNYVLLSNMYASGGKWEDMARTRRAMREAAVK 645
Query: 250 KDV-VSWGTMIDG 261
K+ SW TM DG
Sbjct: 646 KEAGCSWVTMKDG 658
>gi|224141479|ref|XP_002324099.1| predicted protein [Populus trichocarpa]
gi|222867101|gb|EEF04232.1| predicted protein [Populus trichocarpa]
Length = 676
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 173/537 (32%), Positives = 286/537 (53%), Gaps = 44/537 (8%)
Query: 132 QNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFV- 190
Q + +EAL++ + P+ +++I S + + + + +H + + GFV
Sbjct: 51 QQNRLKEALQILHQIDK----PSASVYSTLIQSCIKSRLLQQGKKVHQ---HIKLSGFVP 103
Query: 191 --IISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIP 248
I LL MY C SL++++ LFDEM ER++ SWN++++G+AK GL++ A+ LF+++P
Sbjct: 104 GLFILNRLLEMYAKCDSLMDSQKLFDEMPERDLCSWNILISGYAKMGLLQEAKSLFDKMP 163
Query: 249 SKDVVSWGTMIDGYLQVERLSEALTMYRAM-LCDGIAPNDVMIVDLISACGRAMAFGEGL 307
+D SW MI GY++ +R +EAL ++R M D N + ++A G
Sbjct: 164 ERDNFSWTAMISGYVRHDRPNEALELFRMMKRSDNSKSNKFTVSSALAAAAAVPCLRIGK 223
Query: 308 QIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNG 367
+IH I++ G D + + + + Y CG I
Sbjct: 224 EIHGYIMRTGLDSDEVVWSALSDMYGKCGSI----------------------------- 254
Query: 368 MIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFC 427
E+AR +F+ M RD+ +W+AMI Y Q+ + +LF ++ +G++PNE T V
Sbjct: 255 --EEARHIFDKMVDRDIVTWTAMIDRYFQDGRRKEGFDLFADLLRSGIRPNEFTFSGVLN 312
Query: 428 AIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSV 487
A A+ + + G+ H Y+ ++A++ MY+KCG++ +A VF +
Sbjct: 313 ACANQTSEELGKKVHGYMTRVGFDPFSFAASALVHMYSKCGNMVSAERVFKETPQ--PDL 370
Query: 488 SPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKS 547
W ++I G A +G + ++ + L K + + ITF+GVLS C HAGLVD G YF S
Sbjct: 371 FSWTSLIAGYAQNGQPDEAIRYFELLVKSGTQPDHITFVGVLSACAHAGLVDKGLDYFHS 430
Query: 548 MKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVE 607
+K Y + HY C++DLL R+GQ ++AE +I M MK D +W +LL RIHGN++
Sbjct: 431 IKEQYGLTHTADHYACIIDLLARSGQFDEAENIISKMSMKPDKFLWASLLGGCRIHGNLK 490
Query: 608 VGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
+ +RAA++L ++P + + V L+NIYA AG W + IRK M D G+ + PG S +
Sbjct: 491 LAQRAAEALFEIEPENPATYVTLANIYATAGMWSEVAKIRKTMDDRGVVKKPGLSWI 547
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 129/485 (26%), Positives = 228/485 (47%), Gaps = 73/485 (15%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
++ C + QG+++H I SG FI N L+ +YAKC + ++ +FD D
Sbjct: 77 IQSCIKSRLLQQGKKVHQHIKLSGFVPGLFILNRLLEMYAKCDSLMDSQKLFDEMPERDL 136
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDM-RI 148
+ NI+ISGY + L +A+ +FDK P + S+T+MI G+ ++D EALE+FR M R
Sbjct: 137 CSWNILISGYAKMGLLQEAKSLFDKMPERDNFSWTAMISGYVRHDRPNEALELFRMMKRS 196
Query: 149 LGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVE 208
N+ T++S ++++ + + + +HG +++ +D
Sbjct: 197 DNSKSNKFTVSSALAAAAAVPCLRIGKEIHGYIMRTGLDS-------------------- 236
Query: 209 ARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERL 268
DE V W+ + + + K G +E AR +F+++ +D+V+W MID Y Q R
Sbjct: 237 -----DE------VVWSALSDMYGKCGSIEEARHIFDKMVDRDIVTWTAMIDRYFQDGRR 285
Query: 269 SEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATI 328
E ++ +L GI PN+ +++AC + G ++H + + GFD + F + +
Sbjct: 286 KEGFDLFADLLRSGIRPNEFTFSGVLNACANQTSEELGKKVHGYMTRVGFDPFSFAASAL 345
Query: 329 IHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWS 388
+H Y+ CG + A F+ + + SW +LIAG+
Sbjct: 346 VHMYSKCGNMVSAERVFKETPQPDLFSWTSLIAGY------------------------- 380
Query: 389 AMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG-RWAHEYVLN 447
AQN QP+ A+ F +V +G +P+ IT V V A A +G + +G + H
Sbjct: 381 ------AQNGQPDEAIRYFELLVKSGTQPDHITFVGVLSACAHAGLVDKGLDYFHSIKEQ 434
Query: 448 NSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSP----WNAIICGLAMHGDA 503
+T + A IID+ A+ G + A + + S+ P W +++ G +HG+
Sbjct: 435 YGLTHTADHYACIIDLLARSGQFDEAENIISKM-----SMKPDKFLWASLLGGCRIHGNL 489
Query: 504 NLTLK 508
L +
Sbjct: 490 KLAQR 494
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/280 (21%), Positives = 107/280 (38%), Gaps = 64/280 (22%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E L C+ + G+++H + + G + +F ++L+++Y+KCG + A+ +F
Sbjct: 304 EFTFSGVLNACANQTSEELGKKVHGYMTRVGFDPFSFAASALVHMYSKCGNMVSAERVFK 363
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
D + +I+GY AQN EA+
Sbjct: 364 ETPQPDLFSWTSLIAGY-------------------------------AQNGQPDEAIRY 392
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIIS-----TNLL 197
F + G P+ +T V+S+ H G ++ +D F I T+
Sbjct: 393 FELLVKSGTQPDHITFVGVLSACAHAG-----------LVDKGLDYFHSIKEQYGLTHTA 441
Query: 198 NMYCVCSSLVEARSLFDEMKERNIVS----------WNVMLNGFAKAGLVELARE----L 243
+ Y L+ FDE + NI+S W +L G G ++LA+ L
Sbjct: 442 DHYACIIDLLARSGQFDEAE--NIISKMSMKPDKFLWASLLGGCRIHGNLKLAQRAAEAL 499
Query: 244 FERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGI 283
FE I ++ ++ T+ + Y SE + + M G+
Sbjct: 500 FE-IEPENPATYVTLANIYATAGMWSEVAKIRKTMDDRGV 538
>gi|296082942|emb|CBI22243.3| unnamed protein product [Vitis vinifera]
Length = 526
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 173/464 (37%), Positives = 255/464 (54%), Gaps = 36/464 (7%)
Query: 232 AKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIV 291
A +G + A +LF I D W TMI G Q A+++Y M + P+
Sbjct: 23 AISGTMAYAHQLFPHITEPDTFMWNTMIRGSAQSPSPLNAISLYSQMENGCVRPDKFTFP 82
Query: 292 DLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQF------ 345
++ AC R G +H + + GF+ F++ T+I+F+A CG + +AR F
Sbjct: 83 FVLKACTRLCWVKMGFGVHGRVFRLGFESNTFVRNTLIYFHANCGDLAVARALFDGSAKR 142
Query: 346 --------------------------ELGIKDHIASWNALIAGFIRNGMIEDARQLFNNM 379
E+ +KD + SWN +I G+ + G +E AR+LF+ +
Sbjct: 143 DVVAWSALTAGYARRGELGVARQLFDEMPVKD-LVSWNVMITGYAKRGEMESARKLFDEV 201
Query: 380 QKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGR 439
KRDV +W+AMI+GY ALE+F M G P+E+TM+S+ A G L G+
Sbjct: 202 PKRDVVTWNAMIAGYVLCGSNQQALEMFEEMRSVGELPDEVTMLSLLSACTDLGDLDAGQ 261
Query: 440 WAHEYVLNNSIT-LNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLA 498
H + L+ L A+IDMYAKCGSI A EVF +R++ VS WN+++ GLA
Sbjct: 262 RIHCCISEMGFRDLSVLLGNALIDMYAKCGSIVRALEVFQGMREK--DVSTWNSVLGGLA 319
Query: 499 MHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDL 558
HG A ++ +++++ K I+ + ITF+GVL C HAG V+ G +YF M+ YN+EP++
Sbjct: 320 FHGHAEKSIHLFTEMRKLKIRPDEITFVGVLVACSHAGRVEEGRQYFDLMRDEYNIEPNI 379
Query: 559 KHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAG 618
+HYGCMVDLLGRAG L +A + I +M ++ + ++W TLL A RIHGNVE+G RA L
Sbjct: 380 RHYGCMVDLLGRAGLLNEAFDFIDTMKIEPNAIVWRTLLGACRIHGNVELGRRANMQLLK 439
Query: 619 LQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
++ VLLSNIYA G W+ +RK M D G+++ G S
Sbjct: 440 MRHDESGDYVLLSNIYASRGEWDGVEKVRKLMDDSGVRKEAGCS 483
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 114/448 (25%), Positives = 195/448 (43%), Gaps = 70/448 (15%)
Query: 91 ACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILG 150
A +I ISG + A ++F + +MI G AQ+ A+ ++ M
Sbjct: 19 ASSIAISGTMAY-----AHQLFPHITEPDTFMWNTMIRGSAQSPSPLNAISLYSQMENGC 73
Query: 151 VIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEAR 210
V P++ T V+ + L + +HG V +L + + L+ + C L AR
Sbjct: 74 VRPDKFTFPFVLKACTRLCWVKMGFGVHGRVFRLGFESNTFVRNTLIYFHANCGDLAVAR 133
Query: 211 SLFD-------------------------------EMKERNIVSWNVMLNGFAKAGLVEL 239
+LFD EM +++VSWNVM+ G+AK G +E
Sbjct: 134 ALFDGSAKRDVVAWSALTAGYARRGELGVARQLFDEMPVKDLVSWNVMITGYAKRGEMES 193
Query: 240 ARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGR 299
AR+LF+ +P +DVV+W MI GY+ +AL M+ M G P++V ++ L+SAC
Sbjct: 194 ARKLFDEVPKRDVVTWNAMIAGYVLCGSNQQALEMFEEMRSVGELPDEVTMLSLLSACTD 253
Query: 300 AMAFGEGLQIHSIIVKAGF-DCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNA 358
G +IH I + GF D + +I YA CG I A F+ + +++WN+
Sbjct: 254 LGDLDAGQRIHCCISEMGFRDLSVLLGNALIDMYAKCGSIVRALEVFQGMREKDVSTWNS 313
Query: 359 LIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPN 418
++ G +G E + LF M+K ++P+
Sbjct: 314 VLGGLAFHGHAEKSIHLFTEMRK-------------------------------LKIRPD 342
Query: 419 EITMVSVFCAIASSGTLKEGRWAHEYVLNN-SITLNDNLSAAIIDMYAKCGSINTAFEVF 477
EIT V V A + +G ++EGR + + + +I N ++D+ + G +N AF+
Sbjct: 343 EITFVGVLVACSHAGRVEEGRQYFDLMRDEYNIEPNIRHYGCMVDLLGRAGLLNEAFDFI 402
Query: 478 YHIRDRTTSVSPWNAIICGLAMHGDANL 505
++ ++ W ++ +HG+ L
Sbjct: 403 DTMKIEPNAIV-WRTLLGACRIHGNVEL 429
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 106/390 (27%), Positives = 182/390 (46%), Gaps = 77/390 (19%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
L+ C+ V G +H +F+ G ESNTF++N+LI +A CG ++ A+++FD + D
Sbjct: 85 LKACTRLCWVKMGFGVHGRVFRLGFESNTFVRNTLIYFHANCGDLAVARALFDGSAKRDV 144
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQND--------------- 134
VA + + +GY R L AR++FD+ P+K VS+ MI G+A+
Sbjct: 145 VAWSALTAGYARRGELGVARQLFDEMPVKDLVSWNVMITGYAKRGEMESARKLFDEVPKR 204
Query: 135 ---CW-------------REALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLH 178
W ++ALE+F +MR +G +P+EVT+ S++S+ LG + + +H
Sbjct: 205 DVVTWNAMIAGYVLCGSNQQALEMFEEMRSVGELPDEVTMLSLLSACTDLGDLDAGQRIH 264
Query: 179 GLVIKLMI-DGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLV 237
+ ++ D V++ L++MY C S+V A +F M+E+++ +WN +L G A G
Sbjct: 265 CCISEMGFRDLSVLLGNALIDMYAKCGSIVRALEVFQGMREKDVSTWNSVLGGLAFHGHA 324
Query: 238 ELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISAC 297
E + LF ++ +L I P+++ V ++ AC
Sbjct: 325 EKSIHLFT------------------EMRKLK-------------IRPDEITFVGVLVAC 353
Query: 298 GRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAAC---GRINLARLQFE----LGIK 350
A EG Q ++ D Y+ I+ I H+ GR L F+ + I+
Sbjct: 354 SHAGRVEEGRQYFDLMR----DEYN-IEPNIRHYGCMVDLLGRAGLLNEAFDFIDTMKIE 408
Query: 351 DHIASWNALIAGFIRNGMIEDARQLFNNMQ 380
+ W L+ +G +E R+ NMQ
Sbjct: 409 PNAIVWRTLLGACRIHGNVELGRR--ANMQ 436
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 95/227 (41%), Gaps = 44/227 (19%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLES-NTFIQNSLINLYAKCGLISQAKSMF 81
E+ ++S L C+ + GQ+IH I + G + + N+LI++YAKCG I +A
Sbjct: 241 EVTMLSLLSACTDLGDLDAGQRIHCCISEMGFRDLSVLLGNALIDMYAKCGSIVRAL--- 297
Query: 82 DSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALE 141
EVF K ++ S++ G A + +++
Sbjct: 298 ----------------------------EVFQGMREKDVSTWNSVLGGLAFHGHAEKSIH 329
Query: 142 VFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYC 201
+F +MR L + P+E+T V+ + H G + E R LM D + I N+ + C
Sbjct: 330 LFTEMRKLKIRPDEITFVGVLVACSHAGRVEEGRQY----FDLMRDEYN-IEPNIRHYGC 384
Query: 202 V------CSSLVEARSLFDEMK-ERNIVSWNVMLNGFAKAGLVELAR 241
+ L EA D MK E N + W +L G VEL R
Sbjct: 385 MVDLLGRAGLLNEAFDFIDTMKIEPNAIVWRTLLGACRIHGNVELGR 431
>gi|225452869|ref|XP_002283796.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Vitis vinifera]
Length = 550
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 173/464 (37%), Positives = 255/464 (54%), Gaps = 36/464 (7%)
Query: 232 AKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIV 291
A +G + A +LF I D W TMI G Q A+++Y M + P+
Sbjct: 58 AISGTMAYAHQLFPHITEPDTFMWNTMIRGSAQSPSPLNAISLYSQMENGCVRPDKFTFP 117
Query: 292 DLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQF------ 345
++ AC R G +H + + GF+ F++ T+I+F+A CG + +AR F
Sbjct: 118 FVLKACTRLCWVKMGFGVHGRVFRLGFESNTFVRNTLIYFHANCGDLAVARALFDGSAKR 177
Query: 346 --------------------------ELGIKDHIASWNALIAGFIRNGMIEDARQLFNNM 379
E+ +KD + SWN +I G+ + G +E AR+LF+ +
Sbjct: 178 DVVAWSALTAGYARRGELGVARQLFDEMPVKD-LVSWNVMITGYAKRGEMESARKLFDEV 236
Query: 380 QKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGR 439
KRDV +W+AMI+GY ALE+F M G P+E+TM+S+ A G L G+
Sbjct: 237 PKRDVVTWNAMIAGYVLCGSNQQALEMFEEMRSVGELPDEVTMLSLLSACTDLGDLDAGQ 296
Query: 440 WAHEYVLNNSIT-LNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLA 498
H + L+ L A+IDMYAKCGSI A EVF +R++ VS WN+++ GLA
Sbjct: 297 RIHCCISEMGFRDLSVLLGNALIDMYAKCGSIVRALEVFQGMREK--DVSTWNSVLGGLA 354
Query: 499 MHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDL 558
HG A ++ +++++ K I+ + ITF+GVL C HAG V+ G +YF M+ YN+EP++
Sbjct: 355 FHGHAEKSIHLFTEMRKLKIRPDEITFVGVLVACSHAGRVEEGRQYFDLMRDEYNIEPNI 414
Query: 559 KHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAG 618
+HYGCMVDLLGRAG L +A + I +M ++ + ++W TLL A RIHGNVE+G RA L
Sbjct: 415 RHYGCMVDLLGRAGLLNEAFDFIDTMKIEPNAIVWRTLLGACRIHGNVELGRRANMQLLK 474
Query: 619 LQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
++ VLLSNIYA G W+ +RK M D G+++ G S
Sbjct: 475 MRHDESGDYVLLSNIYASRGEWDGVEKVRKLMDDSGVRKEAGCS 518
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 127/485 (26%), Positives = 211/485 (43%), Gaps = 72/485 (14%)
Query: 43 QQIHSLIFKSGLESNTFIQNSLI--NLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYI 100
+QIH+ + G SNT LI + A G ++ A +F + D N MI G
Sbjct: 30 KQIHASMIVKGFNSNTSALRELIYASSIAISGTMAYAHQLFPHITEPDTFMWNTMIRGSA 89
Query: 101 RNDRLNDAREVFDKTP--------------IKCCVSYTSMIMGFAQNDCWREALEVFRDM 146
++ +A ++ + +K C + MGF + VFR
Sbjct: 90 QSPSPLNAISLYSQMENGCVRPDKFTFPFVLKACTRLCWVKMGFGVHG------RVFR-- 141
Query: 147 RILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGF----VIISTNLLNMYCV 202
LG N ++I + G + V + + DG V+ + L Y
Sbjct: 142 --LGFESNTFVRNTLIYFHANCGDL--------AVARALFDGSAKRDVVAWSALTAGYAR 191
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
L AR LFDEM +++VSWNVM+ G+AK G +E AR+LF+ +P +DVV+W MI GY
Sbjct: 192 RGELGVARQLFDEMPVKDLVSWNVMITGYAKRGEMESARKLFDEVPKRDVVTWNAMIAGY 251
Query: 263 LQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGF-DCY 321
+ +AL M+ M G P++V ++ L+SAC G +IH I + GF D
Sbjct: 252 VLCGSNQQALEMFEEMRSVGELPDEVTMLSLLSACTDLGDLDAGQRIHCCISEMGFRDLS 311
Query: 322 DFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQK 381
+ +I YA CG I A F+ + +++WN+++ G +G E + LF M+K
Sbjct: 312 VLLGNALIDMYAKCGSIVRALEVFQGMREKDVSTWNSVLGGLAFHGHAEKSIHLFTEMRK 371
Query: 382 RDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWA 441
++P+EIT V V A + +G ++EGR
Sbjct: 372 -------------------------------LKIRPDEITFVGVLVACSHAGRVEEGRQY 400
Query: 442 HEYVLNN-SITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMH 500
+ + + +I N ++D+ + G +N AF+ ++ ++ W ++ +H
Sbjct: 401 FDLMRDEYNIEPNIRHYGCMVDLLGRAGLLNEAFDFIDTMKIEPNAIV-WRTLLGACRIH 459
Query: 501 GDANL 505
G+ L
Sbjct: 460 GNVEL 464
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 106/390 (27%), Positives = 182/390 (46%), Gaps = 77/390 (19%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
L+ C+ V G +H +F+ G ESNTF++N+LI +A CG ++ A+++FD + D
Sbjct: 120 LKACTRLCWVKMGFGVHGRVFRLGFESNTFVRNTLIYFHANCGDLAVARALFDGSAKRDV 179
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQND--------------- 134
VA + + +GY R L AR++FD+ P+K VS+ MI G+A+
Sbjct: 180 VAWSALTAGYARRGELGVARQLFDEMPVKDLVSWNVMITGYAKRGEMESARKLFDEVPKR 239
Query: 135 ---CW-------------REALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLH 178
W ++ALE+F +MR +G +P+EVT+ S++S+ LG + + +H
Sbjct: 240 DVVTWNAMIAGYVLCGSNQQALEMFEEMRSVGELPDEVTMLSLLSACTDLGDLDAGQRIH 299
Query: 179 GLVIKLMI-DGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLV 237
+ ++ D V++ L++MY C S+V A +F M+E+++ +WN +L G A G
Sbjct: 300 CCISEMGFRDLSVLLGNALIDMYAKCGSIVRALEVFQGMREKDVSTWNSVLGGLAFHGHA 359
Query: 238 ELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISAC 297
E + LF ++ +L I P+++ V ++ AC
Sbjct: 360 EKSIHLFT------------------EMRKLK-------------IRPDEITFVGVLVAC 388
Query: 298 GRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAAC---GRINLARLQFE----LGIK 350
A EG Q ++ D Y+ I+ I H+ GR L F+ + I+
Sbjct: 389 SHAGRVEEGRQYFDLMR----DEYN-IEPNIRHYGCMVDLLGRAGLLNEAFDFIDTMKIE 443
Query: 351 DHIASWNALIAGFIRNGMIEDARQLFNNMQ 380
+ W L+ +G +E R+ NMQ
Sbjct: 444 PNAIVWRTLLGACRIHGNVELGRRA--NMQ 471
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 95/228 (41%), Gaps = 44/228 (19%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLES-NTFIQNSLINLYAKCGLISQAKSMF 81
E+ ++S L C+ + GQ+IH I + G + + N+LI++YAKCG I +A
Sbjct: 276 EVTMLSLLSACTDLGDLDAGQRIHCCISEMGFRDLSVLLGNALIDMYAKCGSIVRAL--- 332
Query: 82 DSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALE 141
EVF K ++ S++ G A + +++
Sbjct: 333 ----------------------------EVFQGMREKDVSTWNSVLGGLAFHGHAEKSIH 364
Query: 142 VFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYC 201
+F +MR L + P+E+T V+ + H G + E R LM D + I N+ + C
Sbjct: 365 LFTEMRKLKIRPDEITFVGVLVACSHAGRVEEGRQ----YFDLMRDEYN-IEPNIRHYGC 419
Query: 202 V------CSSLVEARSLFDEMK-ERNIVSWNVMLNGFAKAGLVELARE 242
+ L EA D MK E N + W +L G VEL R
Sbjct: 420 MVDLLGRAGLLNEAFDFIDTMKIEPNAIVWRTLLGACRIHGNVELGRR 467
>gi|225436612|ref|XP_002275537.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Vitis vinifera]
Length = 694
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 184/638 (28%), Positives = 317/638 (49%), Gaps = 100/638 (15%)
Query: 28 SALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTL 87
S L+ CS V G+ +H+ + KSG + + +S + +YAKC +
Sbjct: 111 SVLKACSGLGRVGYGKMVHTHVIKSGFAMDVVVMSSAVGMYAKCNV-------------- 156
Query: 88 DPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMR 147
DA ++FD+ P + S+ ++I + Q+ +ALE+F +M+
Sbjct: 157 -----------------FEDAIKLFDEMPERDVASWNNVISCYYQDGQPEKALELFEEMK 199
Query: 148 ILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIK--LMIDGFVIISTNLLNMYCVCSS 205
+ G P+ VTL +VISS L + + +H +++ +DGFV S+ L++MY
Sbjct: 200 VSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFV--SSALVDMY----- 252
Query: 206 LVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQV 265
K G +E+A+E+FE+I K+VVSW +MI GY
Sbjct: 253 --------------------------GKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLK 286
Query: 266 ERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQ 325
+ ++R M +GI P + ++ AC R++ G IH I++ + F+
Sbjct: 287 GDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVN 346
Query: 326 ATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVY 385
+++I Y CG I A +F NM K +V
Sbjct: 347 SSLIDLYFKCGNIG-------------------------------SAENVFQNMPKTNVV 375
Query: 386 SWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYV 445
SW+ MISGY + AL +F M AGVKP+ IT SV A + L++G+ H ++
Sbjct: 376 SWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLEKGKEIHNFI 435
Query: 446 LNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANL 505
+ + + +N+ + A++DMYAKCG+++ A +F + +R W ++I HG A
Sbjct: 436 IESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPER--DFVSWTSMIAAYGSHGQAFE 493
Query: 506 TLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMV 565
LK++ +++ + K + +TF+ +LS C HAGLVD G YF M + Y +P ++HY C++
Sbjct: 494 ALKLFEKMQQSDAKPDKVTFLAILSACSHAGLVDEGCYYFNQMIAEYGFKPAVEHYSCLI 553
Query: 566 DLLGRAGQLEDAEEVIRSMP-MKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHG 624
DLLGR G+L +A E+++ P ++ DV + TL +A +H +++GE+ + L P
Sbjct: 554 DLLGRVGRLREAYEILQRTPDIREDVGLLSTLFSACHLHKKLDLGEQIGRLLIEKDPDDP 613
Query: 625 PSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
+ ++LSN+YA +W++ +R ++++ G+K+ PG S
Sbjct: 614 STYIILSNMYASVKKWDEVRKVRLKIKELGLKKNPGCS 651
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 104/488 (21%), Positives = 217/488 (44%), Gaps = 96/488 (19%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+ L + + C+ + + +G++IH + +SG + F+ ++L+++Y KCG + AK +F+
Sbjct: 208 VTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQ 267
Query: 84 CSTLDPVACNIMISGY-IRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+ V+ N MI+GY ++ D K C+ E+
Sbjct: 268 IQRKNVVSWNSMIAGYSLKGDS-------------KSCI-------------------EL 295
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
FR M G+ P TL+S++ + + + +HG +I+ ++ + ++++L+++Y
Sbjct: 296 FRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFK 355
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
C ++ A ++F M + N+VSWNVM++G+ K G Y
Sbjct: 356 CGNIGSAENVFQNMPKTNVVSWNVMISGYVKVG-------------------------SY 390
Query: 263 LQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD 322
L EAL ++ M G+ P+ + ++ AC + +G +IH+ I+++ + +
Sbjct: 391 L------EALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKLEINE 444
Query: 323 FIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKR 382
+ ++ YA CG ++ +A +FN + +R
Sbjct: 445 VVMGALLDMYAKCGAVD-------------------------------EALHIFNQLPER 473
Query: 383 DVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG-RWA 441
D SW++MI+ Y + Q AL+LF M + KP+++T +++ A + +G + EG +
Sbjct: 474 DFVSWTSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAGLVDEGCYYF 533
Query: 442 HEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHG 501
++ + + +ID+ + G + A+E+ D V + + +H
Sbjct: 534 NQMIAEYGFKPAVEHYSCLIDLLGRVGRLREAYEILQRTPDIREDVGLLSTLFSACHLHK 593
Query: 502 DANLTLKI 509
+L +I
Sbjct: 594 KLDLGEQI 601
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 110/457 (24%), Positives = 207/457 (45%), Gaps = 71/457 (15%)
Query: 154 NEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLF 213
+ L S++ + + + + +++H ++ L + + + +L+N+Y C A+ +F
Sbjct: 2 DTTKLLSLLKTCIDSKYLKQGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVF 61
Query: 214 DEMKER-NIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEAL 272
++ +I WN ++ K + E+F R+ + YL+
Sbjct: 62 QTIENPLDITLWNGLMAACTKNFIFIEGLEVFHRL----------LHFPYLK-------- 103
Query: 273 TMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFY 332
P+ ++ AC G G +H+ ++K+GF + ++ + Y
Sbjct: 104 ------------PDAFTYPSVLKACSGLGRVGYGKMVHTHVIKSGFAMDVVVMSSAVGMY 151
Query: 333 AACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMIS 392
A C + EDA +LF+ M +RDV SW+ +IS
Sbjct: 152 AKCN-------------------------------VFEDAIKLFDEMPERDVASWNNVIS 180
Query: 393 GYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITL 452
Y Q+ QP ALELF M +G KP+ +T+ +V + A L+ G+ H ++ + L
Sbjct: 181 CYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFAL 240
Query: 453 NDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSD 512
+ +S+A++DMY KCG + A EVF I+ + +V WN++I G ++ GD+ ++++
Sbjct: 241 DGFVSSALVDMYGKCGCLEMAKEVFEQIQRK--NVVSWNSMIAGYSLKGDSKSCIELFRR 298
Query: 513 LEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAG 572
+++ I+ T +L C + + LG ++ VE D+ ++DL + G
Sbjct: 299 MDEEGIRPTLTTLSSILMACSRSVNLQLG-KFIHGYIIRNRVEADIFVNSSLIDLYFKCG 357
Query: 573 QLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVG 609
+ AE V ++MP K +VV W + I G V+VG
Sbjct: 358 NIGSAENVFQNMP-KTNVVSWNVM-----ISGYVKVG 388
>gi|225465296|ref|XP_002268999.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Vitis vinifera]
Length = 729
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 197/588 (33%), Positives = 305/588 (51%), Gaps = 77/588 (13%)
Query: 111 VFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGG 170
+F+ T +TSM+ ++ + + ++ M+ GV P+ +I S+ GG
Sbjct: 56 LFNSTLNPNVFVFTSMLRFYSHLQDHAKVVLMYEQMQGCGVRPDAFVYPILIKSA-GTGG 114
Query: 171 IWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDE--------------- 215
I H V+KL + +++MY + AR +FDE
Sbjct: 115 I----GFHAHVLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAMV 170
Query: 216 ------------------MKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGT 257
M ERN+++W M+ G+AK +E AR F+ +P + VVSW
Sbjct: 171 SGYWKWESEGQAQWLFDVMPERNVITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWNA 230
Query: 258 MIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAG 317
M+ GY Q EAL ++ M+ GI P++ V +ISAC G
Sbjct: 231 MLSGYAQNGLAEEALRLFDEMVNAGIEPDETTWVTVISACS----------------SRG 274
Query: 318 FDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFN 377
C + A+++ ++ R+Q ++ AL+ + + G ++ AR+LFN
Sbjct: 275 DPC---LAASLVR------TLHQKRIQLNCFVR------TALLDMYAKFGDLDSARKLFN 319
Query: 378 NMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAG-VKPNEITMVSVFCAIASSGTLK 436
M R+V +W++MI+GYAQN Q MA+ELF M+ A + P+E+TMVSV A G L+
Sbjct: 320 TMPGRNVVTWNSMIAGYAQNGQSAMAIELFKEMITAKKLTPDEVTMVSVISACGHLGALE 379
Query: 437 EGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICG 496
G W ++ N I L+ + A+I MY++CGS+ A VF + R V +N +I G
Sbjct: 380 LGNWVVRFLTENQIKLSISGHNAMIFMYSRCGSMEDAKRVFQEMATR--DVVSYNTLISG 437
Query: 497 LAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEP 556
A HG + + S +++ I+ + +TFIGVL+ C HAGL++ G + F+S+K +P
Sbjct: 438 FAAHGHGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVFESIK-----DP 492
Query: 557 DLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSL 616
+ HY CMVDLLGR G+LEDA+ + MPM+ ++G+LL ASRIH VE+GE AA L
Sbjct: 493 AIDHYACMVDLLGRVGELEDAKRTMERMPMEPHAGVYGSLLNASRIHKQVELGELAANKL 552
Query: 617 AGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
L+P + + +LLSNIYA AGRW+D IR+ M+ G+K+ G+S V
Sbjct: 553 FELEPDNSGNFILLSNIYASAGRWKDVERIREAMKKGGVKKTTGWSWV 600
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 128/475 (26%), Positives = 211/475 (44%), Gaps = 110/475 (23%)
Query: 38 AVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP-------- 89
A + G H+ + K G S+ F++N++I++YA+ G I A+ +FD +
Sbjct: 110 AGTGGIGFHAHVLKLGHGSDAFVRNAVIDMYARLGPIGHARKVFDEIPDYERKVADWNAM 169
Query: 90 -------------------------VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYT 124
+ M++GY + L AR FD P + VS+
Sbjct: 170 VSGYWKWESEGQAQWLFDVMPERNVITWTAMVTGYAKVKDLEAARRYFDCMPERSVVSWN 229
Query: 125 SMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWEC------RMLH 178
+M+ G+AQN EAL +F +M G+ P+E T +VIS+ G C R LH
Sbjct: 230 AMLSGYAQNGLAEEALRLFDEMVNAGIEPDETTWVTVISACSSRGD--PCLAASLVRTLH 287
Query: 179 GLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVE 238
I+L + T LL+MY L AR LF+ M RN+V+WN M+ G+A+ G
Sbjct: 288 QKRIQLN----CFVRTALLDMYAKFGDLDSARKLFNTMPGRNVVTWNSMIAGYAQNGQSA 343
Query: 239 LARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACG 298
+A ELF+ + + + P++V +V +ISACG
Sbjct: 344 MAIELFKEM------------------------------ITAKKLTPDEVTMVSVISACG 373
Query: 299 RAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNA 358
A L++ + +V+ L Q +L I H NA
Sbjct: 374 HLGA----LELGNWVVRF-----------------------LTENQIKLSISGH----NA 402
Query: 359 LIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPN 418
+I + R G +EDA+++F M RDV S++ +ISG+A + A+ L M + G++P+
Sbjct: 403 MIFMYSRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHGHGVEAINLMSTMKEGGIEPD 462
Query: 419 EITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTA 473
+T + V A + +G L+EGR E + + +I + A ++D+ + G + A
Sbjct: 463 RVTFIGVLTACSHAGLLEEGRKVFESIKDPAI----DHYACMVDLLGRVGELEDA 513
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/344 (24%), Positives = 143/344 (41%), Gaps = 76/344 (22%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E V+ + CS+ + + + ++ N F++ +L+++YAK G + A+ +F+
Sbjct: 260 ETTWVTVISACSSRGDPCLAASLVRTLHQKRIQLNCFVRTALLDMYAKFGDLDSARKLFN 319
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+ + V N MI+GY AQN A+E+
Sbjct: 320 TMPGRNVVTWNSMIAGY-------------------------------AQNGQSAMAIEL 348
Query: 143 FRDM-RILGVIPNEVTLASVISSSVHLG----GIWECRMLHGLVIKLMIDGFVIISTNLL 197
F++M + P+EVT+ SVIS+ HLG G W R L IKL I G ++
Sbjct: 349 FKEMITAKKLTPDEVTMVSVISACGHLGALELGNWVVRFLTENQIKLSISG----HNAMI 404
Query: 198 NMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGT 257
MY C S+ +A+ +F EM R++VS+N +++GFA G
Sbjct: 405 FMYSRCGSMEDAKRVFQEMATRDVVSYNTLISGFAAHG---------------------- 442
Query: 258 MIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAG 317
EA+ + M GI P+ V + +++AC A EG ++ I
Sbjct: 443 ---------HGVEAINLMSTMKEGGIEPDRVTFIGVLTACSHAGLLEEGRKVFESIKDPA 493
Query: 318 FDCYDFIQATIIHFYAACGRINLARLQFE-LGIKDHIASWNALI 360
D Y A ++ G + A+ E + ++ H + +L+
Sbjct: 494 IDHY----ACMVDLLGRVGELEDAKRTMERMPMEPHAGVYGSLL 533
>gi|147854092|emb|CAN83391.1| hypothetical protein VITISV_041405 [Vitis vinifera]
Length = 886
Score = 315 bits (808), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 184/638 (28%), Positives = 317/638 (49%), Gaps = 100/638 (15%)
Query: 28 SALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTL 87
S L+ CS V G+ +H+ + KSG + + +S + +YAKC +
Sbjct: 303 SVLKACSGLGRVGYGKMVHTHVIKSGFAMDVVVMSSAVGMYAKCNV-------------- 348
Query: 88 DPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMR 147
DA ++FD+ P + S+ ++I + Q+ +ALE+F +M+
Sbjct: 349 -----------------FEDAIKLFDEMPERDVASWNNVISCYYQDGQPEKALELFEEMK 391
Query: 148 ILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIK--LMIDGFVIISTNLLNMYCVCSS 205
+ G P+ VTL +VISS L + + +H +++ +DGFV S+ L++MY
Sbjct: 392 VSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFV--SSALVDMY----- 444
Query: 206 LVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQV 265
K G +E+A+E+FE+I K+VVSW +MI GY
Sbjct: 445 --------------------------GKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLK 478
Query: 266 ERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQ 325
+ ++R M +GI P + ++ AC R++ G IH I++ + F+
Sbjct: 479 GDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVN 538
Query: 326 ATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVY 385
+++I Y CG I A +F NM K +V
Sbjct: 539 SSLIDLYFKCGNIG-------------------------------SAENVFQNMPKTNVV 567
Query: 386 SWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYV 445
SW+ MISGY + AL +F M AGVKP+ IT SV A + L++G+ H ++
Sbjct: 568 SWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLEKGKEIHNFI 627
Query: 446 LNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANL 505
+ + + +N+ + A++DMYAKCG+++ A +F + +R W ++I HG A
Sbjct: 628 IESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPER--DFVSWTSMIAAYGSHGQAFE 685
Query: 506 TLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMV 565
LK++ +++ + K + +TF+ +LS C HAGLVD G YF M + Y +P ++HY C++
Sbjct: 686 ALKLFEKMQQSDAKPDKVTFLAILSACSHAGLVDEGCYYFNQMIAEYGFKPAVEHYSCLI 745
Query: 566 DLLGRAGQLEDAEEVIRSMP-MKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHG 624
DLLGR G+L +A E+++ P ++ DV + TL +A +H +++GE+ + L P
Sbjct: 746 DLLGRVGRLREAYEILQRTPDIREDVGLLSTLFSACHLHKKLDLGEQIGRLLIEKDPDDP 805
Query: 625 PSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
+ ++LSN+YA +W++ +R ++++ G+K+ PG S
Sbjct: 806 STYIILSNMYASVKKWDEVRKVRLKIKELGLKKNPGCS 843
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 148/571 (25%), Positives = 260/571 (45%), Gaps = 109/571 (19%)
Query: 42 GQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIR 101
G+ IH I GL++N + SLINLY C L AK +F + +P+ +
Sbjct: 214 GKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVFQTIE--NPLDITL------- 264
Query: 102 NDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF-RDMRILGVIPNEVTLAS 160
+ ++ +N + E LEVF R + + P+ T S
Sbjct: 265 ---------------------WNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPS 303
Query: 161 VISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERN 220
V+ + LG + +M+H VIK V++ ++ + MY C+ +A LFDEM ER+
Sbjct: 304 VLKACSGLGRVGYGKMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERD 363
Query: 221 IVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLC 280
+ SWN +++ + + G E A ELFE M
Sbjct: 364 VASWNNVISCYYQDGQPEKALELFEE-------------------------------MKV 392
Query: 281 DGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINL 340
G P+ V + +IS+C R + G +IH +V++GF F+ + ++ Y CG + +
Sbjct: 393 SGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEM 452
Query: 341 ARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQP 400
A+ FE + ++ SWN++IAG+ G D++
Sbjct: 453 AKEVFEQIQRKNVVSWNSMIAGYSLKG---DSKS-------------------------- 483
Query: 401 NMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAI 460
+ELF M + G++P T+ S+ A + S L+ G++ H Y++ N + + +++++
Sbjct: 484 --CIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSL 541
Query: 461 IDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKL 520
ID+Y KCG+I +A VF ++ T+V WN +I G G L I++D+ K +K
Sbjct: 542 IDLYFKCGNIGSAENVFQNM--PKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKP 599
Query: 521 NSITFIGVLSTCCHAGLVDLGERYFKSMKSVYN--VEPDLK----HYGCMVDLLGRAGQL 574
++ITF VL C +++ G K ++N +E L+ G ++D+ + G +
Sbjct: 600 DAITFTSVLPACSQLAVLEKG-------KEIHNFIIESKLEINEVVMGALLDMYAKCGAV 652
Query: 575 EDAEEVIRSMPMKADVVIWGTLLAASRIHGN 605
++A + +P + D V W +++AA HG
Sbjct: 653 DEALHIFNQLPER-DFVSWTSMIAAYGSHGQ 682
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 104/487 (21%), Positives = 216/487 (44%), Gaps = 94/487 (19%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+ L + + C+ + + +G++IH + +SG + F+ ++L+++Y KCG + AK
Sbjct: 400 VTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAK----- 454
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
EVF++ K VS+ SMI G++ + +E+F
Sbjct: 455 --------------------------EVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELF 488
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
R M G+ P TL+S++ + + + +HG +I+ ++ + ++++L+++Y C
Sbjct: 489 RRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKC 548
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYL 263
++ A ++F M + N+VSWNVM++G+ K G YL
Sbjct: 549 GNIGSAENVFQNMPKTNVVSWNVMISGYVKVG-------------------------SYL 583
Query: 264 QVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDF 323
EAL ++ M G+ P+ + ++ AC + +G +IH+ I+++ + +
Sbjct: 584 ------EALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKLEINEV 637
Query: 324 IQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRD 383
+ ++ YA CG ++ +A +FN + +RD
Sbjct: 638 VMGALLDMYAKCGAVD-------------------------------EALHIFNQLPERD 666
Query: 384 VYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG-RWAH 442
SW++MI+ Y + Q AL+LF M + KP+++T +++ A + +G + EG + +
Sbjct: 667 FVSWTSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAGLVDEGCYYFN 726
Query: 443 EYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGD 502
+ + + +ID+ + G + A+E+ D V + + +H
Sbjct: 727 QMIAEYGFKPAVEHYSCLIDLLGRVGRLREAYEILQRTPDIREDVGLLSTLFSACHLHKK 786
Query: 503 ANLTLKI 509
+L +I
Sbjct: 787 LDLGEQI 793
Score = 149 bits (375), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 108/436 (24%), Positives = 198/436 (45%), Gaps = 71/436 (16%)
Query: 175 RMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKER-NIVSWNVMLNGFAK 233
+++H ++ L + + + +L+N+Y C A+ +F ++ +I WN ++ K
Sbjct: 215 KLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVFQTIENPLDITLWNGLMAACTK 274
Query: 234 AGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDL 293
+ E+F R+ + YL+ P+ +
Sbjct: 275 NFIFIEGLEVFHRL----------LHFPYLK--------------------PDAFTYPSV 304
Query: 294 ISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHI 353
+ AC G G +H+ ++K+GF + ++ + YA C
Sbjct: 305 LKACSGLGRVGYGKMVHTHVIKSGFAMDVVVMSSAVGMYAKCN----------------- 347
Query: 354 ASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDA 413
+ EDA +LF+ M +RDV SW+ +IS Y Q+ QP ALELF M +
Sbjct: 348 --------------VFEDAIKLFDEMPERDVASWNNVISCYYQDGQPEKALELFEEMKVS 393
Query: 414 GVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTA 473
G KP+ +T+ +V + A L+ G+ H ++ + L+ +S+A++DMY KCG + A
Sbjct: 394 GFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEMA 453
Query: 474 FEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCC 533
EVF I+ + +V WN++I G ++ GD+ ++++ +++ I+ T +L C
Sbjct: 454 KEVFEQIQRK--NVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACS 511
Query: 534 HAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIW 593
+ + LG ++ VE D+ ++DL + G + AE V ++MP K +VV W
Sbjct: 512 RSVNLQLG-KFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENVFQNMP-KTNVVSW 569
Query: 594 GTLLAASRIHGNVEVG 609
+ I G V+VG
Sbjct: 570 NVM-----ISGYVKVG 580
>gi|357154895|ref|XP_003576937.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Brachypodium distachyon]
Length = 661
Score = 315 bits (808), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 168/449 (37%), Positives = 263/449 (58%), Gaps = 6/449 (1%)
Query: 219 RNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMY-RA 277
++++ N +++ +A + AR LF+ +P +DVVSW T++DGY + EA ++ R
Sbjct: 174 QSVLVGNALVHFYANHRSLAHARNLFDEMPDRDVVSWTTLVDGYARRGLADEAWRVFCRM 233
Query: 278 MLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGR 337
++ G+ PN+V +V ++SA G+ G ++ + G ++ +I + G
Sbjct: 234 VVAGGLQPNEVTLVAVVSAMGQMGLLAFGRMVYRYVADGGVGRSVNLENALIDMFGKFGC 293
Query: 338 INLARLQFE-LGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQ 396
AR F+ + +KD + SW ++ + + G +E A +LF++M +R+ SWS MI+ Y+Q
Sbjct: 294 AASAREVFDSMAVKD-VYSWTTMVNAYAKCGDLESAARLFDDMPRRNAVSWSCMIAAYSQ 352
Query: 397 NEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHE-YVLNNSITLNDN 455
QP A+ LF M++ GV+P +VSV A A G L GRW ++ YV++ L N
Sbjct: 353 ANQPEEAVRLFKAMIEEGVEPINAGLVSVLSACAQLGCLDLGRWIYDNYVISGKAVLTVN 412
Query: 456 LSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEK 515
L A ID+YAKCG + A ++F + +R +V WN++I A+HG + L+++ L+
Sbjct: 413 LGNAFIDVYAKCGDFDAASKLFAEMAER--NVVSWNSMIMAHAVHGQSEEVLRLFEQLKG 470
Query: 516 RNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLE 575
I + ITF+G+LS C H+GLV G RYFK MK +Y +EP +HY CM+DLLG+ G LE
Sbjct: 471 TCIVPDEITFLGLLSACSHSGLVSEGRRYFKEMKLIYGIEPKSEHYACMIDLLGKIGLLE 530
Query: 576 DAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYA 635
+A EV + MPM+ D WG LL A R++GNVE+GE AA L L P VL+S IYA
Sbjct: 531 EAFEVAKGMPMETDEAGWGALLNACRMYGNVEIGEFAADKLVQLNPLDSGIYVLMSQIYA 590
Query: 636 DAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
+W+ +R MR+ G+K+ PG S +
Sbjct: 591 SKNKWDQVKILRVLMRERGVKKNPGCSSI 619
Score = 175 bits (443), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 124/415 (29%), Positives = 202/415 (48%), Gaps = 33/415 (7%)
Query: 93 NIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVI 152
N ++ Y + L AR +FD+ P + VS+T+++ G+A+ EA VF M + G +
Sbjct: 180 NALVHFYANHRSLAHARNLFDEMPDRDVVSWTTLVDGYARRGLADEAWRVFCRMVVAGGL 239
Query: 153 -PNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARS 211
PNEVTL +V+S+ +G + RM++ V + V + L++M+ AR
Sbjct: 240 QPNEVTLVAVVSAMGQMGLLAFGRMVYRYVADGGVGRSVNLENALIDMFGKFGCAASARE 299
Query: 212 LFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEA 271
+FD M +++ SW M+N +AK G +E A LF+ +P ++ VSW MI Y Q + EA
Sbjct: 300 VFDSMAVKDVYSWTTMVNAYAKCGDLESAARLFDDMPRRNAVSWSCMIAAYSQANQPEEA 359
Query: 272 LTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHF 331
+ +++AM+ +G+ P + +V ++SAC A C D + I
Sbjct: 360 VRLFKAMIEEGVEPINAGLVSVLSAC------------------AQLGCLD-LGRWIYDN 400
Query: 332 YAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMI 391
Y G+ A L LG NA I + + G + A +LF M +R+V SW++MI
Sbjct: 401 YVISGK---AVLTVNLG--------NAFIDVYAKCGDFDAASKLFAEMAERNVVSWNSMI 449
Query: 392 SGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG-RWAHEYVLNNSI 450
+A + Q L LF + + P+EIT + + A + SG + EG R+ E L I
Sbjct: 450 MAHAVHGQSEEVLRLFEQLKGTCIVPDEITFLGLLSACSHSGLVSEGRRYFKEMKLIYGI 509
Query: 451 TLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANL 505
A +ID+ K G + AFEV + T W A++ M+G+ +
Sbjct: 510 EPKSEHYACMIDLLGKIGLLEEAFEVAKGMPMETDEAG-WGALLNACRMYGNVEI 563
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 140/296 (47%), Gaps = 12/296 (4%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E+ LV+ + ++ G+ ++ + G+ + ++N+LI+++ K G + A+ +FD
Sbjct: 243 EVTLVAVVSAMGQMGLLAFGRMVYRYVADGGVGRSVNLENALIDMFGKFGCAASAREVFD 302
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
S + D + M++ Y + L A +FD P + VS++ MI ++Q + EA+ +
Sbjct: 303 SMAVKDVYSWTTMVNAYAKCGDLESAARLFDDMPRRNAVSWSCMIAAYSQANQPEEAVRL 362
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNL----LN 198
F+ M GV P L SV+S+ LG + R ++ +I G +++ NL ++
Sbjct: 363 FKAMIEEGVEPINAGLVSVLSACAQLGCLDLGRWIYD---NYVISGKAVLTVNLGNAFID 419
Query: 199 MYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPS----KDVVS 254
+Y C A LF EM ERN+VSWN M+ A G E LFE++ D ++
Sbjct: 420 VYAKCGDFDAASKLFAEMAERNVVSWNSMIMAHAVHGQSEEVLRLFEQLKGTCIVPDEIT 479
Query: 255 WGTMIDGYLQVERLSEALTMYRAM-LCDGIAPNDVMIVDLISACGRAMAFGEGLQI 309
+ ++ +SE ++ M L GI P +I G+ E ++
Sbjct: 480 FLGLLSACSHSGLVSEGRRYFKEMKLIYGIEPKSEHYACMIDLLGKIGLLEEAFEV 535
>gi|225463424|ref|XP_002272240.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Vitis vinifera]
Length = 629
Score = 315 bits (808), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 192/643 (29%), Positives = 320/643 (49%), Gaps = 105/643 (16%)
Query: 27 VSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMF-DSCS 85
+++L+ + H +S+G++IHS + +G ++ SLIN+Y+KC ++ A S+F D
Sbjct: 41 IASLQASAHHKNLSKGKEIHSYMLINGFLNSPLSITSLINMYSKCNQMNFALSIFSDPTH 100
Query: 86 TLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRD 145
++ A N +ISG+I N GF + E E ++
Sbjct: 101 EINVFAFNAIISGFITN--------------------------GFPE-----EGFEFYQK 129
Query: 146 MRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSS 205
MR GVIP++ T I + + + E + +HGL+ K ++ V I + L+N Y
Sbjct: 130 MRNEGVIPDKFTFPCAIKACL---DVLEIKKIHGLLFKFGLELDVFIGSALVNCYL---- 182
Query: 206 LVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQV 265
K GL+E A+ FE +P +DVV W M++GY Q+
Sbjct: 183 ---------------------------KFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQI 215
Query: 266 ERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQ 325
+ L +R M + + P+ + ++S G IH +K G+D +
Sbjct: 216 GQFEMVLETFRRMNDESVVPSRFTVTGVLSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVS 275
Query: 326 ATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVY 385
++I Y C IEDA ++F M+++D++
Sbjct: 276 NSLIDMYGKCK-------------------------------CIEDALEIFEMMREKDIF 304
Query: 386 SWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYV 445
SW++++S + Q + L L M+ AG++P+ +T+ +V A + L GR H Y+
Sbjct: 305 SWNSIVSVHEQCGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYM 364
Query: 446 LNNSITLNDN------LSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAM 499
+ + + + L A+IDMYAKCGS+ A VF + ++ V+ WN +I G M
Sbjct: 365 IVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERMSNK--DVASWNIMIMGYGM 422
Query: 500 HGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLK 559
HG N L+++S + + +K + +TF+GVLS C HAG V G + MKS Y+V P ++
Sbjct: 423 HGYGNEALEMFSRMCEVQLKPDEVTFVGVLSACSHAGFVSQGRNFLVQMKSKYDVAPTIE 482
Query: 560 HYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGL 619
HY C++D+LGRAGQL++A E+ +MP++A+ V+W LLAA R+H + + E AA+ + L
Sbjct: 483 HYTCVIDMLGRAGQLDEAYELALTMPIEANPVVWRALLAACRLHKHAVLAEVAAQRVFEL 542
Query: 620 QPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
+P H S VL+SN+Y GR+E+ +R MR +++ PG S
Sbjct: 543 EPEHCGSYVLMSNVYGAVGRYEEVLEVRHTMRQQNVRKTPGCS 585
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 110/266 (41%), Gaps = 42/266 (15%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESN------TFIQNSLINLYAKCGLISQA 77
+ + + L CS A+ G++IH + SGL + ++N++I++YAKCG + A
Sbjct: 339 VTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDA 398
Query: 78 KSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWR 137
+F+ S D + NIMI GY + N
Sbjct: 399 HLVFERMSNKDVASWNIMIMGYGMHGYGN------------------------------- 427
Query: 138 EALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECR-MLHGLVIKLMIDGFVIISTNL 196
EALE+F M + + P+EVT V+S+ H G + + R L + K + + T +
Sbjct: 428 EALEMFSRMCEVQLKPDEVTFVGVLSACSHAGFVSQGRNFLVQMKSKYDVAPTIEHYTCV 487
Query: 197 LNMYCVCSSLVEARSLFDEMK-ERNIVSWNVMLNG---FAKAGLVELARELFERIPSKDV 252
++M L EA L M E N V W +L A L E+A + + +
Sbjct: 488 IDMLGRAGQLDEAYELALTMPIEANPVVWRALLAACRLHKHAVLAEVAAQRVFELEPEHC 547
Query: 253 VSWGTMIDGYLQVERLSEALTMYRAM 278
S+ M + Y V R E L + M
Sbjct: 548 GSYVLMSNVYGAVGRYEEVLEVRHTM 573
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 91/197 (46%), Gaps = 19/197 (9%)
Query: 418 NEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLS-AAIIDMYAKCGSINTAFEV 476
N T ++ A A L +G+ H Y+L N LN LS ++I+MY+KC +N A +
Sbjct: 36 NLTTCIASLQASAHHKNLSKGKEIHSYMLINGF-LNSPLSITSLINMYSKCNQMNFALSI 94
Query: 477 FYHIRDRTTSVS--PWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCH 534
F D T ++ +NAII G +G + Y + + + TF + C
Sbjct: 95 F---SDPTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVIPDKFTFPCAIKAC-- 149
Query: 535 AGLVDLGE-RYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIW 593
+D+ E + + + +E D+ +V+ + G +E A+ +P++ DVV+W
Sbjct: 150 ---LDVLEIKKIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIR-DVVLW 205
Query: 594 GTLLAASRIHGNVEVGE 610
+ ++G ++G+
Sbjct: 206 NAM-----VNGYAQIGQ 217
>gi|359483597|ref|XP_002272690.2| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
mitochondrial [Vitis vinifera]
Length = 676
Score = 315 bits (808), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 188/576 (32%), Positives = 303/576 (52%), Gaps = 49/576 (8%)
Query: 95 MISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPN 154
MI+ ++RN R+++AR VFDK YT MI G+A+N + AL++F +M +
Sbjct: 17 MITDHLRNQRIDEARTVFDKVSFPDVYLYTMMITGYARNYRFDHALQLFYEMPV------ 70
Query: 155 EVTLASVISSSVHLGGIWECRMLHGLVIKL---MIDGFVIISTNLLNMYCVCSSLVEARS 211
V+S + + G ++C L + KL M + V+ T ++N + + A
Sbjct: 71 ----KDVVSWNSMIKGCFDCADL-TMARKLFDEMPERSVVSWTTMINGFLQFGKIEVAEG 125
Query: 212 LFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEA 271
LF +M R+I +WN M+ G+ G VE LF+ +P ++V+SW +MI G Q R EA
Sbjct: 126 LFYKMPFRDIAAWNSMIYGYCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEA 185
Query: 272 LTMYRAMLCDGI--APNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATII 329
L ++R M+ G+ P +I+AC A A +G+QIH+ + K G+ +I A +I
Sbjct: 186 LGLFRQMMGCGVEVKPTSSTYCCVITACANASALYQGVQIHAHVFKLGYSFDAYISAALI 245
Query: 330 HFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSA 389
FYA C ++ ED+ ++F+ +V W+A
Sbjct: 246 TFYANCKQM-------------------------------EDSLRVFHGKLHMNVVIWTA 274
Query: 390 MISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNS 449
+++GY N + AL++F M+ GV PN+ + S + L GR H +
Sbjct: 275 LVTGYGLNCKHEDALKVFGEMMREGVLPNQSSFTSALNSCCGLEALDWGREIHTAAVKLG 334
Query: 450 ITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKI 509
+ + + ++I MY +CG++N +F I + ++ WN++I G A HG L
Sbjct: 335 LETDVFVGNSLIVMYYRCGNLNDGVVIFKRISKK--NIVSWNSVIVGCAQHGCGMWALAF 392
Query: 510 YSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLG 569
++ + + ++ + ITF G+LS C H+G+ G FK + E L HY CMVD+LG
Sbjct: 393 FNQMVRSMVEPDEITFTGLLSACSHSGMSQKGRCLFKYFSENKSAEVKLDHYACMVDILG 452
Query: 570 RAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVL 629
R+G+LE+AEE+IR+MP+KA+ ++W LL+A +H +EV ERAAK + L+P + VL
Sbjct: 453 RSGKLEEAEELIRNMPVKANSMVWLVLLSACTMHSKLEVAERAAKCIIDLEPHCSSAYVL 512
Query: 630 LSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGVV 665
LSN+YA A RW D IR+EM+ G+ + PG S +
Sbjct: 513 LSNLYASASRWSDVSRIRREMKQRGITKQPGRSWIT 548
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 126/544 (23%), Positives = 215/544 (39%), Gaps = 105/544 (19%)
Query: 49 IFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDA 108
+F E + ++IN + + G I A+ +F D A N MI GY N R+ D
Sbjct: 95 LFDEMPERSVVSWTTMINGFLQFGKIEVAEGLFYKMPFRDIAAWNSMIYGYCCNGRVEDG 154
Query: 109 REVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILG--VIPNEVTLASVISSSV 166
+F + P + +S+TSMI G Q+ EAL +FR M G V P T VI++
Sbjct: 155 LRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQMMGCGVEVKPTSSTYCCVITACA 214
Query: 167 HLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNV 226
+ +++ +H V KL IS L+ Y C + ++ +F N+V W
Sbjct: 215 NASALYQGVQIHAHVFKLGYSFDAYISAALITFYANCKQMEDSLRVFHGKLHMNVVIWTA 274
Query: 227 MLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPN 286
++ G+ E +AL ++ M+ +G+ PN
Sbjct: 275 LVTGYGLNCKHE-------------------------------DALKVFGEMMREGVLPN 303
Query: 287 DVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFE 346
+++C A G +IH+ VK G + F+ ++I Y CG +N + F+
Sbjct: 304 QSSFTSALNSCCGLEALDWGREIHTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFK 363
Query: 347 LGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALEL 406
K +I SWN++I G AQ+ AL
Sbjct: 364 RISKKNIVSWNSVIVGC-------------------------------AQHGCGMWALAF 392
Query: 407 FHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVL-NNSITLNDNLSAAIIDMYA 465
F+ MV + V+P+EIT + A + SG ++GR +Y N S + + A ++D+
Sbjct: 393 FNQMVRSMVEPDEITFTGLLSACSHSGMSQKGRCLFKYFSENKSAEVKLDHYACMVDILG 452
Query: 466 KCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITF 525
+ G + A E+ IR+ +K NS+ +
Sbjct: 453 RSGKLEEAEEL---IRNMP---------------------------------VKANSMVW 476
Query: 526 IGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKH-YGCMVDLLGRAGQLEDAEEVIRSM 584
+ +LS C +++ ER + K + ++EP Y + +L A + D + R M
Sbjct: 477 LVLLSACTMHSKLEVAER---AAKCIIDLEPHCSSAYVLLSNLYASASRWSDVSRIRREM 533
Query: 585 PMKA 588
+
Sbjct: 534 KQRG 537
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 98/215 (45%), Gaps = 31/215 (14%)
Query: 33 CSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVAC 92
C+ A+ QG QIH+ +FK G + +I +LI YA C + + +F ++ V
Sbjct: 213 CANASALYQGVQIHAHVFKLGYSFDAYISAALITFYANCKQMEDSLRVFHGKLHMNVVIW 272
Query: 93 NIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVI 152
+++GY N + D AL+VF +M GV+
Sbjct: 273 TALVTGYGLNCKHED-------------------------------ALKVFGEMMREGVL 301
Query: 153 PNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSL 212
PN+ + S ++S L + R +H +KL ++ V + +L+ MY C +L + +
Sbjct: 302 PNQSSFTSALNSCCGLEALDWGREIHTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVI 361
Query: 213 FDEMKERNIVSWNVMLNGFAKAGLVELARELFERI 247
F + ++NIVSWN ++ G A+ G A F ++
Sbjct: 362 FKRISKKNIVSWNSVIVGCAQHGCGMWALAFFNQM 396
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 65/145 (44%), Gaps = 31/145 (21%)
Query: 25 ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSC 84
+ SAL C A+ G++IH+ K GLE++ F+ NSLI +Y +CG
Sbjct: 306 SFTSALNSCCGLEALDWGREIHTAAVKLGLETDVFVGNSLIVMYYRCG------------ 353
Query: 85 STLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFR 144
LND +F + K VS+ S+I+G AQ+ C AL F
Sbjct: 354 -------------------NLNDGVVIFKRISKKNIVSWNSVIVGCAQHGCGMWALAFFN 394
Query: 145 DMRILGVIPNEVTLASVISSSVHLG 169
M V P+E+T ++S+ H G
Sbjct: 395 QMVRSMVEPDEITFTGLLSACSHSG 419
>gi|414586383|tpg|DAA36954.1| TPA: hypothetical protein ZEAMMB73_991125 [Zea mays]
Length = 1021
Score = 315 bits (808), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 188/651 (28%), Positives = 330/651 (50%), Gaps = 96/651 (14%)
Query: 13 QKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCG 72
++A+L+ D+ VS L C ++ G+Q+H + K+G++++ F+ N+++++Y+K G
Sbjct: 417 RRADLEADDF--TFVSVLGACINLYSLDLGRQVHCITIKNGMDADLFVANAMLDMYSKLG 474
Query: 73 LISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQ 132
I AK++ F P+K VS+ ++I+G A
Sbjct: 475 AIDVAKAL-------------------------------FSLIPVKDSVSWNALIVGLAH 503
Query: 133 NDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVII 192
N+ EA+ + + M+ G+ +EV+ A+ I++ ++ I + +H IK
Sbjct: 504 NEEEGEAINMLKRMKFYGIALDEVSFATAINACSNIWAIETGKQIHSASIK--------- 554
Query: 193 STNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDV 252
Y VCS+ SL D ++K G VE +R++ + + +
Sbjct: 555 -------YNVCSNHAVGSSLIDL---------------YSKFGDVESSRKVLAHVDASSI 592
Query: 253 VSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSI 312
V +I G +Q R EA+ +++ +L DG P++ ++S C R ++ G Q+H
Sbjct: 593 VPINALITGLVQNNREDEAIELFQQVLKDGFKPSNFTFTSILSGCTRPVSSVIGKQVH-- 650
Query: 313 IVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDA 372
CY A + LGI +L+ +++ ++EDA
Sbjct: 651 -------CYTLKSAIL-------------NQDTSLGI--------SLVGIYLKCKLLEDA 682
Query: 373 RQLFNNM-QKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIAS 431
+L + +++ W+A ISGYAQN +L +F M V+ +E T SV A +
Sbjct: 683 NKLLEEVPDHKNLVEWTATISGYAQNGYSVQSLVMFWRMRSYDVRSDEATFTSVLKACSE 742
Query: 432 SGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWN 491
L +G+ H ++ + + ++A++DMY+KCG + ++FE+F +++R ++ PWN
Sbjct: 743 MAALTDGKEIHGLIVKSGFVSYETATSALMDMYSKCGDVISSFEIFKELKNRQ-NIMPWN 801
Query: 492 AIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSV 551
++I G A +G AN L ++ +++ IK + +T +GVL C HAGL+ G +F SM V
Sbjct: 802 SMIVGFAKNGYANEALLLFQKMQESQIKPDDVTLLGVLIACSHAGLISEGLHFFDSMSQV 861
Query: 552 YNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGER 611
Y + P + HY C++DLLGR G L+ A+EVI +P +AD VIW T LAA ++H + E G+
Sbjct: 862 YGIVPRVDHYACLIDLLGRGGHLQKAQEVIDQLPFRADGVIWATYLAACQMHKDEERGKV 921
Query: 612 AAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
AAK L ++P + V LS+++A AG W +A R+ MR+ G+ + PG S
Sbjct: 922 AAKKLVEMEPQSSSTYVFLSSLHAAAGNWVEAKVAREAMREKGVMKFPGCS 972
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 144/621 (23%), Positives = 276/621 (44%), Gaps = 103/621 (16%)
Query: 10 FNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYA 69
F + ++ ++ + + L CS A+ G+Q+H + KSG S+ F Q L+++YA
Sbjct: 144 FQRIRCSIGSTPDQFGIAVVLSACSRLGALEHGRQVHCDVLKSGFCSSVFCQAGLVDMYA 203
Query: 70 KCGLISQAKSMFDSCSTLDPVACNIMISGYIR---------------------------- 101
KCG + A+ MFD + D + MI+GY R
Sbjct: 204 KCGEVDDARRMFDGIACPDTICWTSMIAGYHRVGRYQQALALFSRMEKMGSVPDQVTCVT 263
Query: 102 -------NDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPN 154
RL DAR + + + V++ ++I ++Q+ E +++DM+ G++P
Sbjct: 264 IISTLASMGRLGDARTLLKRIRMTSTVAWNAVIASYSQSGLDSEVFGLYKDMKKQGLMPT 323
Query: 155 EVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFD 214
T AS++S++ ++ E R +H +K +D V + ++L+N+Y + +A+ +FD
Sbjct: 324 RSTFASILSAAANMTAFDEGRQIHATAVKHGLDANVFVGSSLINLYVKHGCISDAKKVFD 383
Query: 215 EMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTM 274
E+NIV WN +L GF +Q E E + M
Sbjct: 384 FSTEKNIVMWNAILYGF-------------------------------VQNELQEETIQM 412
Query: 275 YRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAA 334
++ M + +D V ++ AC + G Q+H I +K G D F+ ++ Y+
Sbjct: 413 FQYMRRADLEADDFTFVSVLGACINLYSLDLGRQVHCITIKNGMDADLFVANAMLDMYSK 472
Query: 335 CGRINLARLQFEL-GIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISG 393
G I++A+ F L +KD + SWNALI G
Sbjct: 473 LGAIDVAKALFSLIPVKDSV-SWNALIVGL------------------------------ 501
Query: 394 YAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLN 453
A NE+ A+ + M G+ +E++ + A ++ ++ G+ H + ++ N
Sbjct: 502 -AHNEEEGEAINMLKRMKFYGIALDEVSFATAINACSNIWAIETGKQIHSASIKYNVCSN 560
Query: 454 DNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDL 513
+ +++ID+Y+K G + ++ +V H+ +S+ P NA+I GL + + ++++ +
Sbjct: 561 HAVGSSLIDLYSKFGDVESSRKVLAHV--DASSIVPINALITGLVQNNREDEAIELFQQV 618
Query: 514 EKRNIKLNSITFIGVLSTCCHAGLVDLGER-YFKSMKSVYNVEPDLKHYGCMVDLLGRAG 572
K K ++ TF +LS C +G++ + ++KS + D +V + +
Sbjct: 619 LKDGFKPSNFTFTSILSGCTRPVSSVIGKQVHCYTLKSAI-LNQDTSLGISLVGIYLKCK 677
Query: 573 QLEDAEEVIRSMPMKADVVIW 593
LEDA +++ +P ++V W
Sbjct: 678 LLEDANKLLEEVPDHKNLVEW 698
Score = 162 bits (410), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 135/575 (23%), Positives = 246/575 (42%), Gaps = 103/575 (17%)
Query: 45 IHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP---VACNIMISGYIR 101
+H+ I + GL + ++L++LY + G + A +C T P A + ++S + R
Sbjct: 75 LHARILRLGLPLRGRLGDALVDLYGRSGRVGYAWRAL-ACCTGAPASSAAASSVLSCHAR 133
Query: 102 NDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASV 161
+ D + F + I+C + G P++ +A V
Sbjct: 134 SGSPRDVLDAFQR--IRCSI----------------------------GSTPDQFGIAVV 163
Query: 162 ISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNI 221
+S+ LG + R +H V+K V L++MY C + +AR +FD + +
Sbjct: 164 LSACSRLGALEHGRQVHCDVLKSGFCSSVFCQAGLVDMYAKCGEVDDARRMFDGIACPDT 223
Query: 222 VSWNVMLNGFAKAGLVEL-----------------------------------ARELFER 246
+ W M+ G+ + G + AR L +R
Sbjct: 224 ICWTSMIAGYHRVGRYQQALALFSRMEKMGSVPDQVTCVTIISTLASMGRLGDARTLLKR 283
Query: 247 IPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEG 306
I V+W +I Y Q SE +Y+ M G+ P ++SA AF EG
Sbjct: 284 IRMTSTVAWNAVIASYSQSGLDSEVFGLYKDMKKQGLMPTRSTFASILSAAANMTAFDEG 343
Query: 307 LQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRN 366
QIH+ VK G D F+ +++I+ Y G I+ A+ F+ + +I WNA++ GF++N
Sbjct: 344 RQIHATAVKHGLDANVFVGSSLINLYVKHGCISDAKKVFDFSTEKNIVMWNAILYGFVQN 403
Query: 367 GMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVF 426
+ E+ Q+F M++ D ++ ++ T VSV
Sbjct: 404 ELQEETIQMFQYMRRAD-------------------------------LEADDFTFVSVL 432
Query: 427 CAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTS 486
A + +L GR H + N + + ++ A++DMY+K G+I+ A +F I + S
Sbjct: 433 GACINLYSLDLGRQVHCITIKNGMDADLFVANAMLDMYSKLGAIDVAKALFSLIPVK-DS 491
Query: 487 VSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFK 546
VS WNA+I GLA + + + + ++ I L+ ++F ++ C + ++ G++
Sbjct: 492 VS-WNALIVGLAHNEEEGEAINMLKRMKFYGIALDEVSFATAINACSNIWAIETGKQ-IH 549
Query: 547 SMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVI 581
S YNV + ++DL + G +E + +V+
Sbjct: 550 SASIKYNVCSNHAVGSSLIDLYSKFGDVESSRKVL 584
>gi|356532382|ref|XP_003534752.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09410-like [Glycine max]
Length = 669
Score = 315 bits (808), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 188/573 (32%), Positives = 312/573 (54%), Gaps = 22/573 (3%)
Query: 93 NIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVI 152
N+ I+ R+ +L++AR++FD+ P + VSY SMI + +N EA VF++M V+
Sbjct: 69 NVEITILGRHGKLDEARKLFDEMPQRDDVSYNSMIAVYLKNKDLLEAETVFKEMPQRNVV 128
Query: 153 PNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSL 212
+++I +G + + R V M T+L++ Y C + EA L
Sbjct: 129 AE----SAMIDGYAKVGRLDDARK----VFDNMTQRNAFSWTSLISGYFSCGKIEEALHL 180
Query: 213 FDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEAL 272
FD+M ERN+VSW +++ GFA+ GL++ A F +P K++++W M+ YL SEA
Sbjct: 181 FDQMPERNVVSWTMVVLGFARNGLMDHAGRFFYLMPEKNIIAWTAMVKAYLDNGCFSEAY 240
Query: 273 TMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFY 332
++ M + ++MI S C RA E + + + + ++
Sbjct: 241 KLFLEMPERNVRSWNIMI----SGCLRANRVDEAIGLFESMPDRNHVSW----TAMVSGL 292
Query: 333 AACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMIS 392
A I +AR F+L +A+W A+I + G++++AR+LF+ + +++V SW+ MI
Sbjct: 293 AQNKMIGIARKYFDLMPYKDMAAWTAMITACVDEGLMDEARKLFDQIPEKNVGSWNTMID 352
Query: 393 GYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITL 452
GYA+N AL LF M+ + +PNE TM SV + S + E AH V++
Sbjct: 353 GYARNSYVGEALNLFVLMLRSCFRPNETTMTSV---VTSCDGMVELMQAHAMVIHLGFEH 409
Query: 453 NDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSD 512
N L+ A+I +Y+K G + +A VF ++ + V W A+I + HG + L++++
Sbjct: 410 NTWLTNALITLYSKSGDLCSARLVFEQLKSK--DVVSWTAMIVAYSNHGHGHHALQVFAR 467
Query: 513 LEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAG 572
+ IK + +TF+G+LS C H GLV G R F S+K YN+ P +HY C+VD+LGRAG
Sbjct: 468 MLVSGIKPDEVTFVGLLSACSHVGLVHQGRRLFDSIKGTYNLTPKAEHYSCLVDILGRAG 527
Query: 573 QLEDAEEVIRSMPMKA-DVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLS 631
+++A +V+ ++P A D + LL A R+HG+V + + L L+PS VLL+
Sbjct: 528 LVDEAMDVVATIPPSARDEAVLVALLGACRLHGDVAIANSIGEKLLELEPSSSGGYVLLA 587
Query: 632 NIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
N YA G+W++ +RK MR+ +KR+PG+S +
Sbjct: 588 NTYAAEGQWDEFAKVRKRMRERNVKRIPGYSQI 620
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 111/460 (24%), Positives = 214/460 (46%), Gaps = 53/460 (11%)
Query: 49 IFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDA 108
+F + + N F SLI+ Y CG I +A +FD + V+ +++ G+ RN ++ A
Sbjct: 149 VFDNMTQRNAFSWTSLISGYFSCGKIEEALHLFDQMPERNVVSWTMVVLGFARNGLMDHA 208
Query: 109 REVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF-----RDMRILGVIPNEVTLASVIS 163
F P K +++T+M+ + N C+ EA ++F R++R ++ + A+ +
Sbjct: 209 GRFFYLMPEKNIIAWTAMVKAYLDNGCFSEAYKLFLEMPERNVRSWNIMISGCLRANRVD 268
Query: 164 SSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVS 223
++ G++E M D + T +++ + AR FD M +++ +
Sbjct: 269 EAI---GLFES----------MPDRNHVSWTAMVSGLAQNKMIGIARKYFDLMPYKDMAA 315
Query: 224 WNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGI 283
W M+ GL++ AR+LF++IP K+V SW TMIDGY + + EAL ++ ML
Sbjct: 316 WTAMITACVDEGLMDEARKLFDQIPEKNVGSWNTMIDGYARNSYVGEALNLFVLMLRSCF 375
Query: 284 APNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARL 343
PN+ + ++++C E +Q H++++ GF+ ++ +I Y+ G + ARL
Sbjct: 376 RPNETTMTSVVTSCD---GMVELMQAHAMVIHLGFEHNTWLTNALITLYSKSGDLCSARL 432
Query: 344 QFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMA 403
FE + SW A+I + +G + A
Sbjct: 433 VFEQLKSKDVVSWTAMIVAYSNHG-------------------------------HGHHA 461
Query: 404 LELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNN-SITLNDNLSAAIID 462
L++F M+ +G+KP+E+T V + A + G + +GR + + ++T + ++D
Sbjct: 462 LQVFARMLVSGIKPDEVTFVGLLSACSHVGLVHQGRRLFDSIKGTYNLTPKAEHYSCLVD 521
Query: 463 MYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGD 502
+ + G ++ A +V I + A++ +HGD
Sbjct: 522 ILGRAGLVDEAMDVVATIPPSARDEAVLVALLGACRLHGD 561
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 73/155 (47%), Gaps = 34/155 (21%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E + S + C + + Q H+++ G E NT++ N+LI LY+K G D
Sbjct: 379 ETTMTSVVTSCDGMVELMQA---HAMVIHLGFEHNTWLTNALITLYSKSG---------D 426
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
CS AR VF++ K VS+T+MI+ ++ + AL+V
Sbjct: 427 LCS----------------------ARLVFEQLKSKDVVSWTAMIVAYSNHGHGHHALQV 464
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRML 177
F M + G+ P+EVT ++S+ H+G + + R L
Sbjct: 465 FARMLVSGIKPDEVTFVGLLSACSHVGLVHQGRRL 499
>gi|15237442|ref|NP_199458.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170604|sp|Q9FHF9.1|PP419_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g46460, mitochondrial; Flags: Precursor
gi|10177583|dbj|BAB10814.1| unnamed protein product [Arabidopsis thaliana]
gi|332008005|gb|AED95388.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 697
Score = 315 bits (808), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 188/576 (32%), Positives = 312/576 (54%), Gaps = 48/576 (8%)
Query: 94 IMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIP 153
++I ++ + R+++AREVF++ P YT MI G+ +++ +AL +F +M + V
Sbjct: 40 VLICNHLLSRRIDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDV-- 97
Query: 154 NEVTLASVISSSVHLGGIWECRMLHGLVIKL---MIDGFVIISTNLLNMYCVCSSLVEAR 210
V+ S+IS V G + +KL M + V+ T ++N + +A
Sbjct: 98 --VSWNSMISGCVECGDM-------NTAVKLFDEMPERSVVSWTAMVNGCFRSGKVDQAE 148
Query: 211 SLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSE 270
LF +M ++ +WN M++G+ + G V+ A +LF+++P K+V+SW TMI G Q ER E
Sbjct: 149 RLFYQMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGE 208
Query: 271 ALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIH 330
AL +++ ML I +I+AC A AF G+Q+H +I+K GF +++ A++I
Sbjct: 209 ALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLIT 268
Query: 331 FYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAM 390
FYA C RI D+R++F+ V W+A+
Sbjct: 269 FYANCKRIG-------------------------------DSRKVFDEKVHEQVAVWTAL 297
Query: 391 ISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSI 450
+SGY+ N++ AL +F GM+ + PN+ T S + ++ GTL G+ H + +
Sbjct: 298 LSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGL 357
Query: 451 TLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIY 510
+ + +++ MY+ G++N A VF I + S+ WN+II G A HG I+
Sbjct: 358 ETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKK--SIVSWNSIIVGCAQHGRGKWAFVIF 415
Query: 511 SDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYN-VEPDLKHYGCMVDLLG 569
+ + N + + ITF G+LS C H G ++ G + F M S N ++ ++HY CMVD+LG
Sbjct: 416 GQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILG 475
Query: 570 RAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVL 629
R G+L++AEE+I M +K + ++W LL+A R+H +V+ GE+AA ++ L + VL
Sbjct: 476 RCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYVL 535
Query: 630 LSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGVV 665
LSNIYA AGRW + +R +M+ G+ + PG S VV
Sbjct: 536 LSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWVV 571
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 104/461 (22%), Positives = 195/461 (42%), Gaps = 71/461 (15%)
Query: 49 IFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDA 108
+F E + +++N + G + QA+ +F D A N M+ GY++ +++DA
Sbjct: 119 LFDEMPERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVKDTAAWNSMVHGYLQFGKVDDA 178
Query: 109 REVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHL 168
++F + P K +S+T+MI G QN+ EAL++F++M + VI++ +
Sbjct: 179 LKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANA 238
Query: 169 GGIWECRMLHGLVIKLMIDGFV---IISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWN 225
+HGL+IKL GF+ +S +L+ Y C + ++R +FDE + W
Sbjct: 239 PAFHMGIQVHGLIIKL---GFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWT 295
Query: 226 VMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAP 285
+L+G++ ++ +AL+++ ML + I P
Sbjct: 296 ALLSGYSLN-------------------------------KKHEDALSIFSGMLRNSILP 324
Query: 286 NDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQF 345
N +++C G ++H + VK G + F+ +++ Y+ G +N A F
Sbjct: 325 NQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVF 384
Query: 346 ELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALE 405
K I SWN++I G AQ+ + A
Sbjct: 385 IKIFKKSIVSWNSIIV-------------------------------GCAQHGRGKWAFV 413
Query: 406 LFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLN--NSITLNDNLSAAIIDM 463
+F M+ +P+EIT + A + G L++GR Y+ + N I ++D+
Sbjct: 414 IFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDI 473
Query: 464 YAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDAN 504
+CG + A E+ + + + W A++ MH D +
Sbjct: 474 LGRCGKLKEAEELIERMVVKPNEMV-WLALLSACRMHSDVD 513
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 125/306 (40%), Gaps = 75/306 (24%)
Query: 33 CSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVAC 92
C+ A G Q+H LI K G ++ SLI YA C I ++ +FD
Sbjct: 235 CANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVW 294
Query: 93 NIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVI 152
++SGY N + D AL +F M ++
Sbjct: 295 TALLSGYSLNKKHED-------------------------------ALSIFSGMLRNSIL 323
Query: 153 PNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSL 212
PN+ T AS ++S LG + + +HG+ +KL ++ + +L+ MY ++ +A S+
Sbjct: 324 PNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSV 383
Query: 213 FDEMKERNIVSWNVMLNGFAK-----------------------------------AGLV 237
F ++ +++IVSWN ++ G A+ G +
Sbjct: 384 FIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFL 443
Query: 238 ELARELFERIPS------KDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIV 291
E R+LF + S + + + M+D + +L EA + M+ + PN+++ +
Sbjct: 444 EKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIERMV---VKPNEMVWL 500
Query: 292 DLISAC 297
L+SAC
Sbjct: 501 ALLSAC 506
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 92/206 (44%), Gaps = 37/206 (17%)
Query: 25 ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSC 84
S L CSA + G+++H + K GLE++ F+ NSL+ +Y+ G
Sbjct: 328 TFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSG------------ 375
Query: 85 STLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFR 144
+NDA VF K K VS+ S+I+G AQ+ + A +F
Sbjct: 376 -------------------NVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFG 416
Query: 145 DMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLM--IDGFVIISTNLLNMYCV 202
M L P+E+T ++S+ H G + + R L + + ID + T ++++
Sbjct: 417 QMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGR 476
Query: 203 CSSLVEARSLFDEMKERNIVSWNVML 228
C L EA +E+ ER +V N M+
Sbjct: 477 CGKLKEA----EELIERMVVKPNEMV 498
>gi|225431281|ref|XP_002268784.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Vitis vinifera]
Length = 647
Score = 315 bits (807), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 163/427 (38%), Positives = 249/427 (58%), Gaps = 5/427 (1%)
Query: 241 RELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRA 300
R +F+++ + W +I GY E++ +Y +M GI P L+ AC A
Sbjct: 93 RLVFQQVEYPNPFLWTALIRGYALQGPFMESVLLYNSMRRQGIGPVSFTFTALLKACSAA 152
Query: 301 MAFGEGLQIHS-IIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNAL 359
+ G Q+H+ I+ GF ++ T+I Y CG + F+ + + SW +L
Sbjct: 153 LDVNLGRQVHTQTILIGGFGSDLYVGNTLIDMYVKCGCLGCGHRVFDEMLDRDVISWTSL 212
Query: 360 IAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNE 419
I + + G +E A +LF+ + +D+ +W+AM++GYAQN +P ALE+F M AGVK +E
Sbjct: 213 IVAYAKVGNMEAASELFDGLPMKDMVAWTAMVTGYAQNARPREALEVFERMQAAGVKTDE 272
Query: 420 ITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNL--SAAIIDMYAKCGSINTAFEVF 477
+T+V V A A G K W + + N+ +A+IDMYAKCGS+ A++VF
Sbjct: 273 VTLVGVISACAQLGAAKYANWVRDVAEQSGFGPTSNVVVGSALIDMYAKCGSVEDAYKVF 332
Query: 478 YHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGL 537
+ +R +V ++++I G AMHG A ++++ ++ K IK N +TFIGVL+ C HAG+
Sbjct: 333 ERMEER--NVYSYSSMIVGFAMHGLAGAAMELFDEMLKTEIKPNRVTFIGVLTACSHAGM 390
Query: 538 VDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLL 597
V+ G++ F M+ + V P HY CMVDLLGRAG+LE+A +++ MPM +WG LL
Sbjct: 391 VEQGQQLFAMMEECHGVAPSEDHYACMVDLLGRAGRLEEALNLVKMMPMNPHGGVWGALL 450
Query: 598 AASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKR 657
A RIHGN ++ + AA L L+P+ + +LLSNIYA AGRW+D +RK MR G+K+
Sbjct: 451 GACRIHGNPDMAQIAASHLFELEPNGIGNYILLSNIYASAGRWDDVSKVRKLMRAKGLKK 510
Query: 658 LPGFSGV 664
PG S V
Sbjct: 511 NPGCSWV 517
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 122/498 (24%), Positives = 226/498 (45%), Gaps = 90/498 (18%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E LVS L C+ HI +Q +Q+H+ IF+ GLE F+ L+ K +
Sbjct: 39 ESRLVSVLHGCT-HI--NQVKQVHAHIFRKGLEQCCFVLAKLLRTLTKLDV--------- 86
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+DP R VF + +T++I G+A + E++ +
Sbjct: 87 ---PMDPYP-----------------RLVFQQVEYPNPFLWTALIRGYALQGPFMESVLL 126
Query: 143 FRDMRILGVIPNEVTLASVISS-----SVHLGGIWECRMLHGLVIKLMIDGF---VIIST 194
+ MR G+ P T +++ + V+LG R +H I +I GF + +
Sbjct: 127 YNSMRRQGIGPVSFTFTALLKACSAALDVNLG-----RQVHTQTI--LIGGFGSDLYVGN 179
Query: 195 NLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVS 254
L++MY C L +FDEM +R+++SW ++ +AK G +E A ELF+ +P KD+V+
Sbjct: 180 TLIDMYVKCGCLGCGHRVFDEMLDRDVISWTSLIVAYAKVGNMEAASELFDGLPMKDMVA 239
Query: 255 WGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIV 314
W M+ GY Q R EAL ++ M G+ ++V +V +ISAC + A + +
Sbjct: 240 WTAMVTGYAQNARPREALEVFERMQAAGVKTDEVTLVGVISACAQLGAAKYANWVRDVAE 299
Query: 315 KAGFDCYD--FIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDA 372
++GF + + +I YA CG + A FE + ++ S++++I GF +G+ A
Sbjct: 300 QSGFGPTSNVVVGSALIDMYAKCGSVEDAYKVFERMEERNVYSYSSMIVGFAMHGLAGAA 359
Query: 373 RQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASS 432
+LF+ M K + +KPN +T + V A + +
Sbjct: 360 MELFDEMLKTE-------------------------------IKPNRVTFIGVLTACSHA 388
Query: 433 GTLKEGRWAHEYVLN-NSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSP-- 489
G +++G+ + + + +++ A ++D+ + G + A + + ++P
Sbjct: 389 GMVEQGQQLFAMMEECHGVAPSEDHYACMVDLLGRAGRLEEALNLV-----KMMPMNPHG 443
Query: 490 --WNAIICGLAMHGDANL 505
W A++ +HG+ ++
Sbjct: 444 GVWGALLGACRIHGNPDM 461
>gi|218194384|gb|EEC76811.1| hypothetical protein OsI_14939 [Oryza sativa Indica Group]
Length = 540
Score = 315 bits (807), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 164/440 (37%), Positives = 256/440 (58%), Gaps = 34/440 (7%)
Query: 225 NVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIA 284
++ +A G VE AR++F+ +P +D+V+WG M+D Y Q EAL ++ +M +
Sbjct: 108 TALVRAYAACGRVEDARKVFDGMPDRDLVAWGVMLDCYCQARNYEEALLLFHSMKRSRVV 167
Query: 285 PNDVMIVDLISACG--RAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLAR 342
P+ V+I ++S C R + FG+ + + ++ A D + +++ YA+C + +A
Sbjct: 168 PDQVIIATVLSTCAHTRNLRFGKAIHSYMLVSDALIDAQ--VSCALMNMYASCADMEMAE 225
Query: 343 LQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNM 402
+ + I ++ G+ +NG +E A +FN M ++DV SWSAMI+GYA++ +P
Sbjct: 226 KLYNRVSEKDIVLSTTMVYGYAKNGKVEIAHSIFNGMPEKDVVSWSAMIAGYAESSKPME 285
Query: 403 ALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIID 462
AL LFH M +GV+P+EITM+S+ + A+ID
Sbjct: 286 ALNLFHDMQRSGVQPDEITMLSIL----------------------------PIGNALID 317
Query: 463 MYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNS 522
M++KCGS+ A +VF + + +V W +II AMHGD L ++ +++ I+ N
Sbjct: 318 MFSKCGSLTLALDVFNAMPQK--NVVTWTSIITASAMHGDGRSALTLFENMKSEGIQPNG 375
Query: 523 ITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIR 582
+TF+G+L CCHAGLV+ G FK M Y +EP +HYGCMVDLLGRA L A ++I+
Sbjct: 376 VTFLGLLYACCHAGLVEEGRLLFKIMVQQYRIEPMHEHYGCMVDLLGRAKLLGQAADLIQ 435
Query: 583 SMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWED 642
SM ++ +VVIWG+LLAA R+HG++E+G AAK + L P+HG ++VLLSNIYA+ G W D
Sbjct: 436 SMHLRPNVVIWGSLLAACRMHGDLELGAFAAKKILELDPNHGGAQVLLSNIYAEYGNWND 495
Query: 643 AFSIRKEMRDCGMKRLPGFS 662
+R M+ G + G S
Sbjct: 496 VKEVRGVMKVQGTWKKKGCS 515
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 120/484 (24%), Positives = 208/484 (42%), Gaps = 96/484 (19%)
Query: 25 ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSC 84
AL S LR + H L F+ G E + F+ +L+ YA CG
Sbjct: 71 ALPSLLRAIALARFPGTAGAAHGLAFRVGAEVDGFVGTALVRAYAACG------------ 118
Query: 85 STLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFR 144
R+ DAR+VFD P + V++ M+ + Q + EAL +F
Sbjct: 119 -------------------RVEDARKVFDGMPDRDLVAWGVMLDCYCQARNYEEALLLFH 159
Query: 145 DMRILGVIPNEVTLASVISSSVHLGGIWECRMLHG--LVIKLMIDGFVIISTNLLNMYCV 202
M+ V+P++V +A+V+S+ H + + +H LV +ID V S L+NMY
Sbjct: 160 SMKRSRVVPDQVIIATVLSTCAHTRNLRFGKAIHSYMLVSDALIDAQV--SCALMNMYAS 217
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
C+ + A L++ + E++IV M+ G+AK G VE+A +F +P KDVVSW MI GY
Sbjct: 218 CADMEMAEKLYNRVSEKDIVLSTTMVYGYAKNGKVEIAHSIFNGMPEKDVVSWSAMIAGY 277
Query: 263 LQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD 322
+ + EAL ++ M G+ P+++ ++ ++
Sbjct: 278 AESSKPMEALNLFHDMQRSGVQPDEITMLSILP--------------------------- 310
Query: 323 FIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKR 382
I +I ++ CG + L A +FN M ++
Sbjct: 311 -IGNALIDMFSKCGSLTL-------------------------------ALDVFNAMPQK 338
Query: 383 DVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAH 442
+V +W+++I+ A + AL LF M G++PN +T + + A +G ++EGR
Sbjct: 339 NVVTWTSIITASAMHGDGRSALTLFENMKSEGIQPNGVTFLGLLYACCHAGLVEEGRLLF 398
Query: 443 EYVLNN-SITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHG 501
+ ++ I ++D+ + + A ++ + R V W +++ MHG
Sbjct: 399 KIMVQQYRIEPMHEHYGCMVDLLGRAKLLGQAADLIQSMHLRPNVVI-WGSLLAACRMHG 457
Query: 502 DANL 505
D L
Sbjct: 458 DLEL 461
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/371 (24%), Positives = 162/371 (43%), Gaps = 76/371 (20%)
Query: 9 VFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLY 68
+F+S K + D ++ + + L C+ + G+ IHS + S + + +L+N+Y
Sbjct: 157 LFHSMKRSRVVPD-QVIIATVLSTCAHTRNLRFGKAIHSYMLVSDALIDAQVSCALMNMY 215
Query: 69 AKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIM 128
A C + A+ +++ S D V M+ GY +N ++ A +F+ P K VS+++MI
Sbjct: 216 ASCADMEMAEKLYNRVSEKDIVLSTTMVYGYAKNGKVEIAHSIFNGMPEKDVVSWSAMIA 275
Query: 129 GFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDG 188
G+A++ EAL +F DM+ GV P+E+T+ S++
Sbjct: 276 GYAESSKPMEALNLFHDMQRSGVQPDEITMLSILP------------------------- 310
Query: 189 FVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIP 248
I L++M+ C SL A +F+ M ++N+V+W ++ A G
Sbjct: 311 ---IGNALIDMFSKCGSLTLALDVFNAMPQKNVVTWTSIITASAMHG------------- 354
Query: 249 SKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQ 308
DG ALT++ M +GI PN V + L+ AC A EG
Sbjct: 355 -----------DG-------RSALTLFENMKSEGIQPNGVTFLGLLYACCHAGLVEEGRL 396
Query: 309 IHSIIVKAGFDCYDFIQATIIHFYAAC-----GRINL----ARLQFELGIKDHIASWNAL 359
+ I+V+ + +H + C GR L A L + ++ ++ W +L
Sbjct: 397 LFKIMVQQ-------YRIEPMHEHYGCMVDLLGRAKLLGQAADLIQSMHLRPNVVIWGSL 449
Query: 360 IAGFIRNGMIE 370
+A +G +E
Sbjct: 450 LAACRMHGDLE 460
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 146/329 (44%), Gaps = 46/329 (13%)
Query: 284 APNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARL 343
AP + L+ A A G H + + G + F+ ++ YAACGR+
Sbjct: 66 APGRRALPSLLRAIALARFPGTAGAAHGLAFRVGAEVDGFVGTALVRAYAACGRV----- 120
Query: 344 QFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMA 403
EDAR++F+ M RD+ +W M+ Y Q A
Sbjct: 121 --------------------------EDARKVFDGMPDRDLVAWGVMLDCYCQARNYEEA 154
Query: 404 LELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDM 463
L LFH M + V P+++ + +V A + L+ G+ H Y+L + ++ +S A+++M
Sbjct: 155 LLLFHSMKRSRVVPDQVIIATVLSTCAHTRNLRFGKAIHSYMLVSDALIDAQVSCALMNM 214
Query: 464 YAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSI 523
YA C + A +++ + ++ +S ++ G A +G + I++ + ++++ S
Sbjct: 215 YASCADMEMAEKLYNRVSEKDIVLS--TTMVYGYAKNGKVEIAHSIFNGMPEKDVVSWSA 272
Query: 524 TFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPD-------LKHYGCMVDLLGRAGQLED 576
G + ++L F M+ V+PD L ++D+ + G L
Sbjct: 273 MIAGYAESSKPMEALNL----FHDMQR-SGVQPDEITMLSILPIGNALIDMFSKCGSLTL 327
Query: 577 AEEVIRSMPMKADVVIWGTLLAASRIHGN 605
A +V +MP K +VV W +++ AS +HG+
Sbjct: 328 ALDVFNAMPQK-NVVTWTSIITASAMHGD 355
>gi|297740651|emb|CBI30833.3| unnamed protein product [Vitis vinifera]
Length = 709
Score = 315 bits (807), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 192/643 (29%), Positives = 320/643 (49%), Gaps = 105/643 (16%)
Query: 27 VSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMF-DSCS 85
+++L+ + H +S+G++IHS + +G ++ SLIN+Y+KC ++ A S+F D
Sbjct: 41 IASLQASAHHKNLSKGKEIHSYMLINGFLNSPLSITSLINMYSKCNQMNFALSIFSDPTH 100
Query: 86 TLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRD 145
++ A N +ISG+I N GF + E E ++
Sbjct: 101 EINVFAFNAIISGFITN--------------------------GFPE-----EGFEFYQK 129
Query: 146 MRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSS 205
MR GVIP++ T I + + + E + +HGL+ K ++ V I + L+N Y
Sbjct: 130 MRNEGVIPDKFTFPCAIKACL---DVLEIKKIHGLLFKFGLELDVFIGSALVNCY----- 181
Query: 206 LVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQV 265
K GL+E A+ FE +P +DVV W M++GY Q+
Sbjct: 182 --------------------------LKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQI 215
Query: 266 ERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQ 325
+ L +R M + + P+ + ++S G IH +K G+D +
Sbjct: 216 GQFEMVLETFRRMNDESVVPSRFTVTGVLSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVS 275
Query: 326 ATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVY 385
++I Y C IEDA ++F M+++D++
Sbjct: 276 NSLIDMYGKCK-------------------------------CIEDALEIFEMMREKDIF 304
Query: 386 SWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYV 445
SW++++S + Q + L L M+ AG++P+ +T+ +V A + L GR H Y+
Sbjct: 305 SWNSIVSVHEQCGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYM 364
Query: 446 LNNSITLNDN------LSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAM 499
+ + + + L A+IDMYAKCGS+ A VF + ++ V+ WN +I G M
Sbjct: 365 IVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERMSNK--DVASWNIMIMGYGM 422
Query: 500 HGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLK 559
HG N L+++S + + +K + +TF+GVLS C HAG V G + MKS Y+V P ++
Sbjct: 423 HGYGNEALEMFSRMCEVQLKPDEVTFVGVLSACSHAGFVSQGRNFLVQMKSKYDVAPTIE 482
Query: 560 HYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGL 619
HY C++D+LGRAGQL++A E+ +MP++A+ V+W LLAA R+H + + E AA+ + L
Sbjct: 483 HYTCVIDMLGRAGQLDEAYELALTMPIEANPVVWRALLAACRLHKHAVLAEVAAQRVFEL 542
Query: 620 QPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
+P H S VL+SN+Y GR+E+ +R MR +++ PG S
Sbjct: 543 EPEHCGSYVLMSNVYGAVGRYEEVLEVRHTMRQQNVRKTPGCS 585
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 110/266 (41%), Gaps = 42/266 (15%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESN------TFIQNSLINLYAKCGLISQA 77
+ + + L CS A+ G++IH + SGL + ++N++I++YAKCG + A
Sbjct: 339 VTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDA 398
Query: 78 KSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWR 137
+F+ S D + NIMI GY + N
Sbjct: 399 HLVFERMSNKDVASWNIMIMGYGMHGYGN------------------------------- 427
Query: 138 EALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECR-MLHGLVIKLMIDGFVIISTNL 196
EALE+F M + + P+EVT V+S+ H G + + R L + K + + T +
Sbjct: 428 EALEMFSRMCEVQLKPDEVTFVGVLSACSHAGFVSQGRNFLVQMKSKYDVAPTIEHYTCV 487
Query: 197 LNMYCVCSSLVEARSLFDEMK-ERNIVSWNVMLNG---FAKAGLVELARELFERIPSKDV 252
++M L EA L M E N V W +L A L E+A + + +
Sbjct: 488 IDMLGRAGQLDEAYELALTMPIEANPVVWRALLAACRLHKHAVLAEVAAQRVFELEPEHC 547
Query: 253 VSWGTMIDGYLQVERLSEALTMYRAM 278
S+ M + Y V R E L + M
Sbjct: 548 GSYVLMSNVYGAVGRYEEVLEVRHTM 573
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 91/197 (46%), Gaps = 19/197 (9%)
Query: 418 NEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLS-AAIIDMYAKCGSINTAFEV 476
N T ++ A A L +G+ H Y+L N LN LS ++I+MY+KC +N A +
Sbjct: 36 NLTTCIASLQASAHHKNLSKGKEIHSYMLINGF-LNSPLSITSLINMYSKCNQMNFALSI 94
Query: 477 FYHIRDRT--TSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCH 534
F D T +V +NAII G +G + Y + + + TF + C
Sbjct: 95 F---SDPTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVIPDKFTFPCAIKAC-- 149
Query: 535 AGLVDLGE-RYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIW 593
+D+ E + + + +E D+ +V+ + G +E A+ +P++ DVV+W
Sbjct: 150 ---LDVLEIKKIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIR-DVVLW 205
Query: 594 GTLLAASRIHGNVEVGE 610
+ ++G ++G+
Sbjct: 206 NAM-----VNGYAQIGQ 217
>gi|147790932|emb|CAN77232.1| hypothetical protein VITISV_001089 [Vitis vinifera]
Length = 575
Score = 315 bits (807), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 164/452 (36%), Positives = 253/452 (55%), Gaps = 6/452 (1%)
Query: 213 FDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEAL 272
++ K V + + +A G ++ + LF R + V W +I G+ +AL
Sbjct: 1 MEDKKPPAXVPLDKLQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQAL 60
Query: 273 TMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFY 332
Y ML G+ PN ++ C G +HS VK GFD +++ ++ Y
Sbjct: 61 NFYAQMLTQGVEPNAFTFSSILKLC----PIEPGKALHSQAVKLGFDSDLYVRTGLLDVY 116
Query: 333 AACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMIS 392
A G + A+ F+ + + S A++ + ++G ++ AR LF+ M++RD W+ MI
Sbjct: 117 ARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMID 176
Query: 393 GYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITL 452
GY QN PN AL LF M+ A KPNE+T++SV A G L+ GRW H Y+ NN I
Sbjct: 177 GYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQF 236
Query: 453 NDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSD 512
N ++ A++DMY+KCGS+ A VF I D+ V WN++I G AM G + L+++
Sbjct: 237 NVHVGTALVDMYSKCGSLEDARLVFDKIDDK--DVVAWNSMIVGYAMXGFSQEALQLFKS 294
Query: 513 LEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAG 572
+ + + +ITFIG+LS C H+G V G F MK Y +EP ++HYGCMV+LLGRAG
Sbjct: 295 MCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAG 354
Query: 573 QLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSN 632
+E A E++++M ++ D V+WGTLL A R+HG + +GE+ + L ++ + +LLSN
Sbjct: 355 HVEQAYELVKNMNIEPDPVLWGTLLGACRLHGKIALGEKIVELLVDQNLANSGTYILLSN 414
Query: 633 IYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
IYA G W+ +R M+D G+K+ PG S +
Sbjct: 415 IYAAVGNWDGVARLRTMMKDSGVKKEPGCSSI 446
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 120/435 (27%), Positives = 197/435 (45%), Gaps = 50/435 (11%)
Query: 99 YIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTL 158
Y RL+ + +F +T +T++I G A +AL + M GV PN T
Sbjct: 19 YASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTF 78
Query: 159 ASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKE 218
+S++ L I + LH +KL D + + T LL++Y +V A+ LFD M E
Sbjct: 79 SSILK----LCPIEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPE 134
Query: 219 RNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAM 278
+++VS ML +AK G ++ AR LF+ + +D V W MIDGY Q +EAL ++R M
Sbjct: 135 KSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRM 194
Query: 279 LCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRI 338
L PN+V ++ ++SACG+ A G +HS I G + ++ Y+ CG +
Sbjct: 195 LKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSL 254
Query: 339 NLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNE 398
ARL F+ + +WN++I G+ G ++A QLF +M +
Sbjct: 255 EDARLVFDKIDDKDVVAWNSMIVGYAMXGFSQEALQLFKSMCR----------------- 297
Query: 399 QPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG-----RWAHEYVLNNSITLN 453
G+ P IT + + A SG + EG + EY + I
Sbjct: 298 --------------MGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKI--- 340
Query: 454 DNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSP--WNAIICGLAMHGDANLTLKIYS 511
++++ + G + A+E+ +++ P W ++ +HG L KI
Sbjct: 341 -EHYGCMVNLLGRAGHVEQAYEL---VKNMNIEPDPVLWGTLLGACRLHGKIALGEKIVE 396
Query: 512 DLEKRNIKLNSITFI 526
L +N+ NS T+I
Sbjct: 397 LLVDQNLA-NSGTYI 410
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 96/365 (26%), Positives = 170/365 (46%), Gaps = 66/365 (18%)
Query: 28 SALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTL 87
S L+ C + G+ +HS K G +S+ +++ L+++YA+ G + A+ +FD+
Sbjct: 80 SILKLC----PIEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPEK 135
Query: 88 DPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMR 147
V+ M++ Y ++ L+ AR +FD + V + MI G+ QN EAL +FR M
Sbjct: 136 SLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRML 195
Query: 148 ILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLV 207
PNEVT+ SV+S+ LG + R +H + I V + T L++MY C SL
Sbjct: 196 KAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLE 255
Query: 208 EARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVER 267
+AR +FD++ ++++V+WN M+ G+A G +
Sbjct: 256 DARLVFDKIDDKDVVAWNSMIVGYAMXGFSQ----------------------------- 286
Query: 268 LSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQAT 327
EAL ++++M G+ P ++ + ++SACG HS V G+D ++
Sbjct: 287 --EALQLFKSMCRMGLHPTNITFIGILSACG-----------HSGWVTEGWDIFN----- 328
Query: 328 IIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ-KRDVYS 386
+++ E GI+ I + ++ R G +E A +L NM + D
Sbjct: 329 --------------KMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVL 374
Query: 387 WSAMI 391
W ++
Sbjct: 375 WGTLL 379
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 103/243 (42%), Gaps = 72/243 (29%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E+ ++S L C A+ G+ +HS I +G++ N + +L+++Y+KCG
Sbjct: 203 EVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCG---------- 252
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
L DAR VFDK K V++ SMI+G+A +EAL++
Sbjct: 253 ---------------------SLEDARLVFDKIDDKDVVAWNSMIVGYAMXGFSQEALQL 291
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
F+ M +G+ P +T ++S+ H G W
Sbjct: 292 FKSMCRMGLHPTNITFIGILSACGHSG--W------------------------------ 319
Query: 203 CSSLVEARSLFDEMK-----ERNIVSWNVMLNGFAKAGLVELARELFERIP-SKDVVSWG 256
+ E +F++MK E I + M+N +AG VE A EL + + D V WG
Sbjct: 320 ---VTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWG 376
Query: 257 TMI 259
T++
Sbjct: 377 TLL 379
>gi|224060327|ref|XP_002300144.1| predicted protein [Populus trichocarpa]
gi|222847402|gb|EEE84949.1| predicted protein [Populus trichocarpa]
Length = 666
Score = 315 bits (807), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 190/563 (33%), Positives = 295/563 (52%), Gaps = 81/563 (14%)
Query: 112 FDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGI 171
FD+T + S+ S+I A+ E+L F MR L + PN T I S L +
Sbjct: 42 FDRTDV---YSWNSLIAELARGGDSCESLRAFSWMRKLDIKPNRSTFPCAIKSCSALFDL 98
Query: 172 WECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGF 231
+ H + + + +S+ L++MY C L AR
Sbjct: 99 NSGKQAHQQALVFGFESDLFVSSALIDMYSKCGKLSNARV-------------------- 138
Query: 232 AKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCD---------G 282
LF+ IP +++V+W ++I GY+Q + EAL +++ L + G
Sbjct: 139 -----------LFDEIPRRNIVTWTSLITGYVQNDDAHEALMVFKEFLFEKSEGNGEEVG 187
Query: 283 IAPNDVMIVDLISACGRA--MAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINL 340
+ + V ++ ++SAC R A EG +H + +K G D ++ T++ YA CG ++L
Sbjct: 188 TSVDSVAMISVLSACSRVSNKAVSEG--VHGVAIKVGLDKVMGVENTLLDAYAKCGEVSL 245
Query: 341 ARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQP 400
+R ++F++M ++DV SW++MI+ YAQN
Sbjct: 246 SR-------------------------------KVFDDMAEKDVVSWNSMIAVYAQNGLS 274
Query: 401 NMALELFHGMVDAGV-KPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAA 459
A E+FHGM+ AG K NE+T+ ++ A A G L+ G H+ V+ N ++ +
Sbjct: 275 TDAFEVFHGMLKAGGGKYNEVTLSTLLLACAHEGALRVGMCLHDQVIKMGYVNNVIMATS 334
Query: 460 IIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIK 519
IIDMY KCG A F ++++ +V W A+I G MHG A L ++ + +K
Sbjct: 335 IIDMYCKCGQAEMARNAFDGMKEK--NVRSWTAMIAGYGMHGFAREALDVFYQMIWAGVK 392
Query: 520 LNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEE 579
N ITFI VL+ C HAG ++ G R+F +M YNVEP ++HYGCMVDLLGRAG +++A
Sbjct: 393 PNYITFISVLAACSHAGFLEEGWRWFNAMSHEYNVEPGVEHYGCMVDLLGRAGYIKEAYN 452
Query: 580 VIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGR 639
+I+SM ++ D V+WG+LLAA RIH +VE+ E +A+ L L PS+ VLL+NIYADAGR
Sbjct: 453 LIKSMKVRRDFVLWGSLLAACRIHKDVELAEISARELFKLDPSNCGYYVLLANIYADAGR 512
Query: 640 WEDAFSIRKEMRDCGMKRLPGFS 662
W+D +R ++D G+ + PG+S
Sbjct: 513 WKDVERMRILVKDRGLVKPPGYS 535
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 131/491 (26%), Positives = 222/491 (45%), Gaps = 111/491 (22%)
Query: 29 ALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLD 88
A++ CSA ++ G+Q H G ES+ F+ ++LI++Y+KCG
Sbjct: 88 AIKSCSALFDLNSGKQAHQQALVFGFESDLFVSSALIDMYSKCG---------------- 131
Query: 89 PVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRI 148
+L++AR +FD+ P + V++TS+I G+ QND EAL VF++
Sbjct: 132 ---------------KLSNARVLFDEIPRRNIVTWTSLITGYVQNDDAHEALMVFKEFLF 176
Query: 149 ---------LGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNM 199
+G + V + SV+S+ + +HG+ IK+ +D + + LL+
Sbjct: 177 EKSEGNGEEVGTSVDSVAMISVLSACSRVSNKAVSEGVHGVAIKVGLDKVMGVENTLLDA 236
Query: 200 YCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMI 259
Y C + +R +FD+M E+++VSWN M+ +A+ GL A E+F
Sbjct: 237 YAKCGEVSLSRKVFDDMAEKDVVSWNSMIAVYAQNGLSTDAFEVFH-------------- 282
Query: 260 DGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFD 319
G L+ G N+V + L+ AC A G+ +H ++K G+
Sbjct: 283 -GMLKA---------------GGGKYNEVTLSTLLLACAHEGALRVGMCLHDQVIKMGYV 326
Query: 320 CYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNM 379
+ +II Y CG+ +AR F+ + ++ SW A+IAG+ GM AR+
Sbjct: 327 NNVIMATSIIDMYCKCGQAEMARNAFDGMKEKNVRSWTAMIAGY---GMHGFARE----- 378
Query: 380 QKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG- 438
AL++F+ M+ AGVKPN IT +SV A + +G L+EG
Sbjct: 379 -----------------------ALDVFYQMIWAGVKPNYITFISVLAACSHAGFLEEGW 415
Query: 439 RW----AHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAII 494
RW +HEY + + ++D+ + G I A+ + ++ R V W +++
Sbjct: 416 RWFNAMSHEYNVEPGV----EHYGCMVDLLGRAGYIKEAYNLIKSMKVRRDFV-LWGSLL 470
Query: 495 CGLAMHGDANL 505
+H D L
Sbjct: 471 AACRIHKDVEL 481
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 100/367 (27%), Positives = 163/367 (44%), Gaps = 81/367 (22%)
Query: 24 LALVSALRYCS--AHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMF 81
+A++S L CS ++ AVS+G +H + K GL+ ++N+L++ YAKCG +S ++ +F
Sbjct: 193 VAMISVLSACSRVSNKAVSEG--VHGVAIKVGLDKVMGVENTLLDAYAKCGEVSLSRKVF 250
Query: 82 DSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALE 141
D + D V+ N MI+ Y AQN +A E
Sbjct: 251 DDMAEKDVVSWNSMIAVY-------------------------------AQNGLSTDAFE 279
Query: 142 VFRDM-RILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMY 200
VF M + G NEVTL++++ + H G + LH VIK+ VI++T++++MY
Sbjct: 280 VFHGMLKAGGGKYNEVTLSTLLLACAHEGALRVGMCLHDQVIKMGYVNNVIMATSIIDMY 339
Query: 201 CVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMID 260
C C AR+ FD MKE+N+ SW M+ G+ G F R
Sbjct: 340 CKCGQAEMARNAFDGMKEKNVRSWTAMIAGYGMHG--------FAR-------------- 377
Query: 261 GYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQ-----IHSIIVK 315
EAL ++ M+ G+ PN + + +++AC A EG + H V+
Sbjct: 378 ---------EALDVFYQMIWAGVKPNYITFISVLAACSHAGFLEEGWRWFNAMSHEYNVE 428
Query: 316 AGFDCYDFIQATIIHFYAACGRINLA-RLQFELGIKDHIASWNALIAGFIRNGMIE---- 370
G + Y ++ G I A L + ++ W +L+A + +E
Sbjct: 429 PGVEHY----GCMVDLLGRAGYIKEAYNLIKSMKVRRDFVLWGSLLAACRIHKDVELAEI 484
Query: 371 DARQLFN 377
AR+LF
Sbjct: 485 SARELFK 491
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 109/242 (45%), Gaps = 30/242 (12%)
Query: 375 LFNNMQKR-DVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSG 433
LFN R DVYSW+++I+ A+ +L F M +KPN T CAI S
Sbjct: 37 LFNKYFDRTDVYSWNSLIAELARGGDSCESLRAFSWMRKLDIKPNRSTFP---CAIKSCS 93
Query: 434 TL---KEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPW 490
L G+ AH+ L + +S+A+IDMY+KCG ++ A +F I R ++ W
Sbjct: 94 ALFDLNSGKQAHQQALVFGFESDLFVSSALIDMYSKCGKLSNARVLFDEIPRR--NIVTW 151
Query: 491 NAIICGLAMHGDANLTLKIYSDL---------EKRNIKLNSITFIGVLSTCCHAGLVDLG 541
++I G + DA+ L ++ + E+ ++S+ I VLS C +
Sbjct: 152 TSLITGYVQNDDAHEALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACSRVSNKAVS 211
Query: 542 ERYFK-----SMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTL 596
E + V VE L +D + G++ + +V M K DVV W ++
Sbjct: 212 EGVHGVAIKVGLDKVMGVENTL------LDAYAKCGEVSLSRKVFDDMAEK-DVVSWNSM 264
Query: 597 LA 598
+A
Sbjct: 265 IA 266
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 102/233 (43%), Gaps = 37/233 (15%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E+ L + L C+ A+ G +H + K G +N + S+I++Y KCG A++ FD
Sbjct: 294 EVTLSTLLLACAHEGALRVGMCLHDQVIKMGYVNNVIMATSIIDMYCKCGQAEMARNAFD 353
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+N R S+T+MI G+ + REAL+V
Sbjct: 354 GMKE--------------KNVR-----------------SWTAMIAGYGMHGFAREALDV 382
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWE-CRMLHGLVIKLMIDGFVIISTNLLNMYC 201
F M GV PN +T SV+++ H G + E R + + + ++ V ++++
Sbjct: 383 FYQMIWAGVKPNYITFISVLAACSHAGFLEEGWRWFNAMSHEYNVEPGVEHYGCMVDLLG 442
Query: 202 VCSSLVEARSLFDEMK-ERNIVSWNVMLNGFAKAGLVEL----ARELFERIPS 249
+ EA +L MK R+ V W +L VEL ARELF+ PS
Sbjct: 443 RAGYIKEAYNLIKSMKVRRDFVLWGSLLAACRIHKDVELAEISARELFKLDPS 495
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 64/133 (48%), Gaps = 4/133 (3%)
Query: 468 GSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIG 527
+ NT ++ T V WN++I LA GD+ +L+ +S + K +IK N TF
Sbjct: 28 AATNTNLTTLFNKYFDRTDVYSWNSLIAELARGGDSCESLRAFSWMRKLDIKPNRSTFPC 87
Query: 528 VLSTCCHAGLVDLGE-RYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPM 586
+ +C + L DL + V+ E DL ++D+ + G+L +A + +P
Sbjct: 88 AIKSC--SALFDLNSGKQAHQQALVFGFESDLFVSSALIDMYSKCGKLSNARVLFDEIPR 145
Query: 587 KADVVIWGTLLAA 599
+ ++V W +L+
Sbjct: 146 R-NIVTWTSLITG 157
>gi|297740626|emb|CBI30808.3| unnamed protein product [Vitis vinifera]
Length = 660
Score = 315 bits (806), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 188/576 (32%), Positives = 303/576 (52%), Gaps = 49/576 (8%)
Query: 95 MISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPN 154
MI+ ++RN R+++AR VFDK YT MI G+A+N + AL++F +M +
Sbjct: 1 MITDHLRNQRIDEARTVFDKVSFPDVYLYTMMITGYARNYRFDHALQLFYEMPV------ 54
Query: 155 EVTLASVISSSVHLGGIWECRMLHGLVIKL---MIDGFVIISTNLLNMYCVCSSLVEARS 211
V+S + + G ++C L + KL M + V+ T ++N + + A
Sbjct: 55 ----KDVVSWNSMIKGCFDCADL-TMARKLFDEMPERSVVSWTTMINGFLQFGKIEVAEG 109
Query: 212 LFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEA 271
LF +M R+I +WN M+ G+ G VE LF+ +P ++V+SW +MI G Q R EA
Sbjct: 110 LFYKMPFRDIAAWNSMIYGYCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEA 169
Query: 272 LTMYRAMLCDGI--APNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATII 329
L ++R M+ G+ P +I+AC A A +G+QIH+ + K G+ +I A +I
Sbjct: 170 LGLFRQMMGCGVEVKPTSSTYCCVITACANASALYQGVQIHAHVFKLGYSFDAYISAALI 229
Query: 330 HFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSA 389
FYA C ++ ED+ ++F+ +V W+A
Sbjct: 230 TFYANCKQM-------------------------------EDSLRVFHGKLHMNVVIWTA 258
Query: 390 MISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNS 449
+++GY N + AL++F M+ GV PN+ + S + L GR H +
Sbjct: 259 LVTGYGLNCKHEDALKVFGEMMREGVLPNQSSFTSALNSCCGLEALDWGREIHTAAVKLG 318
Query: 450 ITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKI 509
+ + + ++I MY +CG++N +F I + ++ WN++I G A HG L
Sbjct: 319 LETDVFVGNSLIVMYYRCGNLNDGVVIFKRISKK--NIVSWNSVIVGCAQHGCGMWALAF 376
Query: 510 YSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLG 569
++ + + ++ + ITF G+LS C H+G+ G FK + E L HY CMVD+LG
Sbjct: 377 FNQMVRSMVEPDEITFTGLLSACSHSGMSQKGRCLFKYFSENKSAEVKLDHYACMVDILG 436
Query: 570 RAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVL 629
R+G+LE+AEE+IR+MP+KA+ ++W LL+A +H +EV ERAAK + L+P + VL
Sbjct: 437 RSGKLEEAEELIRNMPVKANSMVWLVLLSACTMHSKLEVAERAAKCIIDLEPHCSSAYVL 496
Query: 630 LSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGVV 665
LSN+YA A RW D IR+EM+ G+ + PG S +
Sbjct: 497 LSNLYASASRWSDVSRIRREMKQRGITKQPGRSWIT 532
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 124/544 (22%), Positives = 213/544 (39%), Gaps = 105/544 (19%)
Query: 49 IFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDA 108
+F E + ++IN + + G I A+ +F D A N MI GY N R+ D
Sbjct: 79 LFDEMPERSVVSWTTMINGFLQFGKIEVAEGLFYKMPFRDIAAWNSMIYGYCCNGRVEDG 138
Query: 109 REVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILG--VIPNEVTLASVISSSV 166
+F + P + +S+TSMI G Q+ EAL +FR M G V P T VI++
Sbjct: 139 LRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQMMGCGVEVKPTSSTYCCVITACA 198
Query: 167 HLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNV 226
+ +++ +H V KL IS L+ Y C + ++ +F N+V W
Sbjct: 199 NASALYQGVQIHAHVFKLGYSFDAYISAALITFYANCKQMEDSLRVFHGKLHMNVVIWTA 258
Query: 227 MLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPN 286
++ G+ E +AL ++ M+ +G+ PN
Sbjct: 259 LVTGYGLNCKHE-------------------------------DALKVFGEMMREGVLPN 287
Query: 287 DVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFE 346
+++C A G +IH+ VK G + F+ ++I Y CG +N + F+
Sbjct: 288 QSSFTSALNSCCGLEALDWGREIHTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFK 347
Query: 347 LGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALEL 406
K +I SWN++I G AQ+ AL
Sbjct: 348 RISKKNIVSWNSVIVGC-------------------------------AQHGCGMWALAF 376
Query: 407 FHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVL-NNSITLNDNLSAAIIDMYA 465
F+ MV + V+P+EIT + A + SG ++GR +Y N S + + A ++D+
Sbjct: 377 FNQMVRSMVEPDEITFTGLLSACSHSGMSQKGRCLFKYFSENKSAEVKLDHYACMVDILG 436
Query: 466 KCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITF 525
+ G + A E+ + +K NS+ +
Sbjct: 437 RSGKLEEAEEL------------------------------------IRNMPVKANSMVW 460
Query: 526 IGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKH-YGCMVDLLGRAGQLEDAEEVIRSM 584
+ +LS C +++ ER + K + ++EP Y + +L A + D + R M
Sbjct: 461 LVLLSACTMHSKLEVAER---AAKCIIDLEPHCSSAYVLLSNLYASASRWSDVSRIRREM 517
Query: 585 PMKA 588
+
Sbjct: 518 KQRG 521
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 65/145 (44%), Gaps = 31/145 (21%)
Query: 25 ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSC 84
+ SAL C A+ G++IH+ K GLE++ F+ NSLI +Y +CG
Sbjct: 290 SFTSALNSCCGLEALDWGREIHTAAVKLGLETDVFVGNSLIVMYYRCG------------ 337
Query: 85 STLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFR 144
LND +F + K VS+ S+I+G AQ+ C AL F
Sbjct: 338 -------------------NLNDGVVIFKRISKKNIVSWNSVIVGCAQHGCGMWALAFFN 378
Query: 145 DMRILGVIPNEVTLASVISSSVHLG 169
M V P+E+T ++S+ H G
Sbjct: 379 QMVRSMVEPDEITFTGLLSACSHSG 403
>gi|356560286|ref|XP_003548424.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
mitochondrial-like [Glycine max]
Length = 911
Score = 315 bits (806), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 189/675 (28%), Positives = 339/675 (50%), Gaps = 76/675 (11%)
Query: 25 ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSC 84
AL L+ C A + + G ++H+ + K G + + +LINLY K
Sbjct: 133 ALTVVLKICLALMELWLGMEVHACLVKRGFHVDVHLSCALINLYEK-------------- 178
Query: 85 STLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFR 144
Y+ ++ A +VFD+TP++ + +++M +++ W +ALE+FR
Sbjct: 179 --------------YLG---IDGANQVFDETPLQEDFLWNTIVMANLRSEKWEDALELFR 221
Query: 145 DMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCS 204
M+ + T+ ++ + L + E + +HG VI+ I ++++MY +
Sbjct: 222 RMQSASAKATDGTIVKLLQACGKLRALNEGKQIHGYVIRFGRVSNTSICNSIVSMYSRNN 281
Query: 205 SLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSK----DVVSWGTMID 260
L AR FD ++ N SWN +++ +A + A +L + + S D+++W +++
Sbjct: 282 RLELARVAFDSTEDHNSASWNSIISSYAVNDCLNGAWDLLQEMESSGVKPDIITWNSLLS 341
Query: 261 GYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDC 320
G+L LT +R++ G P+ I + A F G +IH I+++ +
Sbjct: 342 GHLLQGSYENVLTNFRSLQSAGFKPDSCSITSALQAVIGLGCFNLGKEIHGYIMRSKLEY 401
Query: 321 YDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ 380
++ +++ Y ++ A + F +I +WN+LI+G+ G+ ++A +L N M+
Sbjct: 402 DVYVCTSLVDKYIKNDCLDKAEVVFHHTKNKNICAWNSLISGYTYKGLFDNAEKLLNQMK 461
Query: 381 KR---------------------------------------DVYSWSAMISGYAQNEQPN 401
+ +V SW+AMISG QNE
Sbjct: 462 EEGIKPDLVTWNSLVSGYSMSGRSEEALAVINRIKSLGLTPNVVSWTAMISGCCQNENYM 521
Query: 402 MALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAII 461
AL+ F M + VKPN T+ ++ A A S LK G H + + + + ++ A+I
Sbjct: 522 DALQFFSQMQEENVKPNSTTICTLLRACAGSSLLKIGEEIHCFSMRHGFLDDIYIATALI 581
Query: 462 DMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLN 521
DMY K G + A EVF +I+++T + WN ++ G A++G ++ ++ K ++ +
Sbjct: 582 DMYGKGGKLKVAHEVFRNIKEKT--LPCWNCMMMGYAIYGHGEEVFTLFDEMRKTGVRPD 639
Query: 522 SITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVI 581
+ITF +LS C ++GLV G +YF SMK+ YN+ P ++HY CMVDLLG+AG L++A + I
Sbjct: 640 AITFTALLSGCKNSGLVMDGWKYFDSMKTDYNINPTIEHYSCMVDLLGKAGFLDEALDFI 699
Query: 582 RSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWE 641
++P KAD IWG +LAA R+H ++++ E AA++L L+P + + L+ NIY+ RW
Sbjct: 700 HAVPQKADASIWGAVLAACRLHKDIKIAEIAARNLLRLEPYNSANYALMMNIYSTFDRWG 759
Query: 642 DAFSIRKEMRDCGMK 656
D +++ M G+K
Sbjct: 760 DVERLKESMTALGVK 774
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 124/587 (21%), Positives = 240/587 (40%), Gaps = 108/587 (18%)
Query: 95 MISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQ--NDCWREALEVFRDMRILGVI 152
M+ Y++ A +VF + + + S I FA D E L VF+++ GV
Sbjct: 70 MMRNYLQFGDFESATKVFFVGFARNYLLWNSFIEEFASFGGDS-HEILAVFKELHDKGVK 128
Query: 153 PNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSL 212
+ L V+ + L +W +H ++K V +S L+N+Y
Sbjct: 129 FDSKALTVVLKICLALMELWLGMEVHACLVKRGFHVDVHLSCALINLY------------ 176
Query: 213 FDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEAL 272
K ++ A ++F+ P ++ W T++ L+ E+ +AL
Sbjct: 177 -------------------EKYLGIDGANQVFDETPLQEDFLWNTIVMANLRSEKWEDAL 217
Query: 273 TMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFY 332
++R M D IV L+ ACG+ A EG QIH +++ G I +I+ Y
Sbjct: 218 ELFRRMQSASAKATDGTIVKLLQACGKLRALNEGKQIHGYVIRFGRVSNTSICNSIVSMY 277
Query: 333 AACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ----KRDVYSWS 388
+ R+ LAR+ F+ + ASWN++I+ + N + A L M+ K D+ +W+
Sbjct: 278 SRNNRLELARVAFDSTEDHNSASWNSIISSYAVNDCLNGAWDLLQEMESSGVKPDIITWN 337
Query: 389 AMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNN 448
+++SG+ L F + AG KP+ ++ S A+ G G+ H Y++ +
Sbjct: 338 SLLSGHLLQGSYENVLTNFRSLQSAGFKPDSCSITSALQAVIGLGCFNLGKEIHGYIMRS 397
Query: 449 SITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRT------------------------ 484
+ + + +++D Y K ++ A VF+H +++
Sbjct: 398 KLEYDVYVCTSLVDKYIKNDCLDKAEVVFHHTKNKNICAWNSLISGYTYKGLFDNAEKLL 457
Query: 485 -----TSVSP----WNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHA 535
+ P WN+++ G +M G + L + + ++ + N +++ ++S CC
Sbjct: 458 NQMKEEGIKPDLVTWNSLVSGYSMSGRSEEALAVINRIKSLGLTPNVVSWTAMISGCCQN 517
Query: 536 GLVDLGERYFKSMKSVYNVEPD---------------------------LKH-------- 560
++F M+ NV+P+ ++H
Sbjct: 518 ENYMDALQFFSQMQE-ENVKPNSTTICTLLRACAGSSLLKIGEEIHCFSMRHGFLDDIYI 576
Query: 561 YGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVE 607
++D+ G+ G+L+ A EV R++ K + W ++ I+G+ E
Sbjct: 577 ATALIDMYGKGGKLKVAHEVFRNIKEKT-LPCWNCMMMGYAIYGHGE 622
>gi|108708629|gb|ABF96424.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125586550|gb|EAZ27214.1| hypothetical protein OsJ_11153 [Oryza sativa Japonica Group]
Length = 748
Score = 315 bits (806), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 179/578 (30%), Positives = 303/578 (52%), Gaps = 64/578 (11%)
Query: 88 DPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMR 147
D A ++ Y+R R+ DA FD+ + ++ +M+ G +N EA+ +F M
Sbjct: 103 DAFASGALVHAYLRFGRVRDAYRAFDEMRHRDVPAWNAMLSGLCRNARAAEAVGLFGRMV 162
Query: 148 ILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLV 207
+ GV + VT++SV+ V LG +H +K +D + VC
Sbjct: 163 MEGVAGDAVTVSSVLPMCVLLGDRALALAMHLYAVKHGLDDELF----------VC---- 208
Query: 208 EARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVER 267
N M++ + K G++E R++F+ + S+D+V+W ++I G+ Q +
Sbjct: 209 -----------------NAMIDVYGKLGMLEEVRKVFDGMSSRDLVTWNSIISGHEQGGQ 251
Query: 268 LSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQAT 327
++ A+ M+ M G++P+ + ++ L SA + G +H +V+ G+D D I
Sbjct: 252 VASAVEMFCGMRDSGVSPDVLTLLSLASAIAQCGDICGGRSVHCYMVRRGWDVGDIIAG- 310
Query: 328 IIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSW 387
NA++ + + IE A+++F++M RD SW
Sbjct: 311 -----------------------------NAIVDMYAKLSKIEAAQRMFDSMPVRDAVSW 341
Query: 388 SAMISGYAQNEQPNMALELF-HGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVL 446
+ +I+GY QN + A+ ++ H G+KP + T VSV A + G L++G H +
Sbjct: 342 NTLITGYMQNGLASEAIHVYDHMQKHEGLKPIQGTFVSVLPAYSHLGALQQGTRMHALSI 401
Query: 447 NNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLT 506
+ L+ + +ID+YAKCG ++ A +F R+T PWNA+I G+ +HG
Sbjct: 402 KTGLNLDVYVGTCVIDLYAKCGKLDEAMLLFEQTPRRSTG--PWNAVISGVGVHGHGAKA 459
Query: 507 LKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVD 566
L ++S +++ I + +TF+ +L+ C HAGLVD G +F M++ Y ++P KHY CMVD
Sbjct: 460 LSLFSQMQQEGISPDHVTFVSLLAACSHAGLVDQGRNFFNMMQTAYGIKPIAKHYACMVD 519
Query: 567 LLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPS 626
+ GRAGQL+DA + IR+MP+K D IWG LL A RIHGNVE+G+ A+++L L P +
Sbjct: 520 MFGRAGQLDDAFDFIRNMPIKPDSAIWGALLGACRIHGNVEMGKVASQNLFELDPKNVGY 579
Query: 627 RVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
VL+SN+YA G+W+ +R +R +++ PG+S +
Sbjct: 580 YVLMSNMYAKVGKWDGVDEVRSLVRRQNLQKTPGWSSI 617
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 112/481 (23%), Positives = 208/481 (43%), Gaps = 102/481 (21%)
Query: 45 IHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDR 104
+H K GL+ F+ N++I++Y K G++ + + +FD S+ D V N +ISG+ + +
Sbjct: 192 MHLYAVKHGLDDELFVCNAMIDVYGKLGMLEEVRKVFDGMSSRDLVTWNSIISGHEQGGQ 251
Query: 105 LNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISS 164
+ A+E+F MR GV P+ +TL S+ S+
Sbjct: 252 VA-------------------------------SAVEMFCGMRDSGVSPDVLTLLSLASA 280
Query: 165 SVHLGGIWECRMLHGLVIKLMID-GFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVS 223
G I R +H +++ D G +I +++MY S + A+ +FD M R+ VS
Sbjct: 281 IAQCGDICGGRSVHCYMVRRGWDVGDIIAGNAIVDMYAKLSKIEAAQRMFDSMPVRDAVS 340
Query: 224 WNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAML-CDG 282
WN ++ G+ + GL SEA+ +Y M +G
Sbjct: 341 WNTLITGYMQNGLA-------------------------------SEAIHVYDHMQKHEG 369
Query: 283 IAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLAR 342
+ P V ++ A A +G ++H++ +K G + ++ +I YA CG+++ A
Sbjct: 370 LKPIQGTFVSVLPAYSHLGALQQGTRMHALSIKTGLNLDVYVGTCVIDLYAKCGKLDEAM 429
Query: 343 LQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNM 402
L FE + WNA+I+G +G A LF+ MQ+
Sbjct: 430 LLFEQTPRRSTGPWNAVISGVGVHGHGAKALSLFSQMQQE-------------------- 469
Query: 403 ALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGR-WAHEYVLNNSITLNDNLSAAII 461
G+ P+ +T VS+ A + +G + +GR + + I A ++
Sbjct: 470 -----------GISPDHVTFVSLLAACSHAGLVDQGRNFFNMMQTAYGIKPIAKHYACMV 518
Query: 462 DMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYS----DLEKRN 517
DM+ + G ++ AF+ ++ + S + W A++ +HG+ + K+ S +L+ +N
Sbjct: 519 DMFGRAGQLDDAFDFIRNMPIKPDS-AIWGALLGACRIHGNVEMG-KVASQNLFELDPKN 576
Query: 518 I 518
+
Sbjct: 577 V 577
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 116/465 (24%), Positives = 203/465 (43%), Gaps = 97/465 (20%)
Query: 177 LHGLVIKL-MIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAG 235
LH ++L ++ G S L++ Y + +A FDEM+ R++ +WN ML+G +
Sbjct: 90 LHACALRLGLLRGDAFASGALVHAYLRFGRVRDAYRAFDEMRHRDVPAWNAMLSGLCRNA 149
Query: 236 LVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLIS 295
R +EA+ ++ M+ +G+A + V + ++
Sbjct: 150 -------------------------------RAAEAVGLFGRMVMEGVAGDAVTVSSVLP 178
Query: 296 AC----GRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKD 351
C RA+A L +H VK G D F+ +I Y G + R F+
Sbjct: 179 MCVLLGDRALA----LAMHLYAVKHGLDDELFVCNAMIDVYGKLGMLEEVRKVFDGMSSR 234
Query: 352 HIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMV 411
+ +WN++I+G + Q Q A+E+F GM
Sbjct: 235 DLVTWNSIISG-------------------------------HEQGGQVASAVEMFCGMR 263
Query: 412 DAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSA-AIIDMYAKCGSI 470
D+GV P+ +T++S+ AIA G + GR H Y++ + D ++ AI+DMYAK I
Sbjct: 264 DSGVSPDVLTLLSLASAIAQCGDICGGRSVHCYMVRRGWDVGDIIAGNAIVDMYAKLSKI 323
Query: 471 NTAFEVF--YHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEK-RNIKLNSITFIG 527
A +F +RD + WN +I G +G A+ + +Y ++K +K TF+
Sbjct: 324 EAAQRMFDSMPVRDAVS----WNTLITGYMQNGLASEAIHVYDHMQKHEGLKPIQGTFVS 379
Query: 528 VLSTCCHAGLVDLGER-YFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPM 586
VL H G + G R + S+K+ N+ D+ C++DL + G+L++A + P
Sbjct: 380 VLPAYSHLGALQQGTRMHALSIKTGLNL--DVYVGTCVIDLYAKCGKLDEAMLLFEQTPR 437
Query: 587 KADVVIWGTLLAASRIHGNVEVGERAAKSLA--------GLQPSH 623
++ W +++ +HG+ AK+L+ G+ P H
Sbjct: 438 RS-TGPWNAVISGVGVHGH------GAKALSLFSQMQQEGISPDH 475
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/366 (23%), Positives = 156/366 (42%), Gaps = 78/366 (21%)
Query: 41 QGQQIHSLI------FKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTL------- 87
QG Q+ S + SG+ + SL + A+CG I +S+ C +
Sbjct: 248 QGGQVASAVEMFCGMRDSGVSPDVLTLLSLASAIAQCGDICGGRSV--HCYMVRRGWDVG 305
Query: 88 DPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDM- 146
D +A N ++ Y + ++ A+ +FD P++ VS+ ++I G+ QN EA+ V+ M
Sbjct: 306 DIIAGNAIVDMYAKLSKIEAAQRMFDSMPVRDAVSWNTLITGYMQNGLASEAIHVYDHMQ 365
Query: 147 RILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSL 206
+ G+ P + T SV+ + HLG + + +H L IK ++ V + T ++++Y C L
Sbjct: 366 KHEGLKPIQGTFVSVLPAYSHLGALQQGTRMHALSIKTGLNLDVYVGTCVIDLYAKCGKL 425
Query: 207 VEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVE 266
EA LF++ R+ WN +++G G
Sbjct: 426 DEAMLLFEQTPRRSTGPWNAVISGVGVHG------------------------------- 454
Query: 267 RLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQA 326
++AL+++ M +GI+P+ V V L++AC H+ +V G + ++ +Q
Sbjct: 455 HGAKALSLFSQMQQEGISPDHVTFVSLLAACS-----------HAGLVDQGRNFFNMMQT 503
Query: 327 TIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ-KRDVY 385
GIK + ++ F R G ++DA NM K D
Sbjct: 504 A-------------------YGIKPIAKHYACMVDMFGRAGQLDDAFDFIRNMPIKPDSA 544
Query: 386 SWSAMI 391
W A++
Sbjct: 545 IWGALL 550
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 109/250 (43%), Gaps = 42/250 (16%)
Query: 26 LVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCS 85
VS L S A+ QG ++H+L K+GL + ++ +I+LYAKCG
Sbjct: 377 FVSVLPAYSHLGALQQGTRMHALSIKTGLNLDVYVGTCVIDLYAKCG------------- 423
Query: 86 TLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRD 145
+L++A +F++TP + + ++I G + +AL +F
Sbjct: 424 ------------------KLDEAMLLFEQTPRRSTGPWNAVISGVGVHGHGAKALSLFSQ 465
Query: 146 MRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTN---LLNMYCV 202
M+ G+ P+ VT S++++ H G + + R ++ G I+ + +++M+
Sbjct: 466 MQQEGISPDHVTFVSLLAACSHAGLVDQGRNFFNMMQTAY--GIKPIAKHYACMVDMFGR 523
Query: 203 CSSLVEARSLFDEMK-ERNIVSWNVMLNGFAKAGLVELAR----ELFERIPSKDVVSWGT 257
L +A M + + W +L G VE+ + LFE P K+V +
Sbjct: 524 AGQLDDAFDFIRNMPIKPDSAIWGALLGACRIHGNVEMGKVASQNLFELDP-KNVGYYVL 582
Query: 258 MIDGYLQVER 267
M + Y +V +
Sbjct: 583 MSNMYAKVGK 592
>gi|297736528|emb|CBI25399.3| unnamed protein product [Vitis vinifera]
Length = 846
Score = 315 bits (806), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 197/640 (30%), Positives = 311/640 (48%), Gaps = 92/640 (14%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
+ A + ++ C ++ G+ +H+ I G ++ F+ SL+N+YAK G I + +F+
Sbjct: 167 KFAYSAIIQSCIGLDSLELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFN 226
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+ + V+ N MISG C S N EA ++
Sbjct: 227 MMTEHNQVSWNAMISG---------------------CTS----------NGLHLEAFDL 255
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
F M+ PN TL SV + L + + + +L I+G V++ T L++MY
Sbjct: 256 FVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEGNVLVGTALIDMYSK 315
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
C SL +ARS+FD F G+ P W MI GY
Sbjct: 316 CGSLHDARSVFD--------------TNFINCGV---------NTP------WNAMISGY 346
Query: 263 LQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD 322
Q EAL +Y M +GI + + +A + + G +H +++K G D
Sbjct: 347 SQSGCSQEALELYVQMCQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLM- 405
Query: 323 FIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKR 382
++ NA+ + + G +ED R++F+ M++R
Sbjct: 406 -----------------------------VVSVNNAIADAYSKCGFLEDVRKVFDRMEER 436
Query: 383 DVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAH 442
D+ SW+ +++ Y+Q+ AL F M + G PN+ T SV + AS L+ GR H
Sbjct: 437 DIVSWTTLVTAYSQSSLGEEALATFCLMREEGFAPNQFTFSSVLISCASLCFLEYGRQVH 496
Query: 443 EYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGD 502
+ + + +A+IDMYAKCGSI A +VF I + + W AII G A HG
Sbjct: 497 GLLCKAGLDTEKCIESALIDMYAKCGSITEAGKVFDKISN--PDIVSWTAIISGYAQHGL 554
Query: 503 ANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYG 562
L+++ +E IK N++T + VL C H G+V+ G YF+ M+ Y V P+++HY
Sbjct: 555 VEDALQLFRRMELSGIKANAVTLLCVLFACSHGGMVEEGLFYFQQMEDGYGVVPEMEHYA 614
Query: 563 CMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPS 622
C++DLLGR G+L+DA E IR MPM+ + ++W TLL R+HGNVE+GE AA+ + ++P
Sbjct: 615 CIIDLLGRVGRLDDAMEFIRKMPMEPNEMVWQTLLGGCRVHGNVELGEIAARKILSIRPE 674
Query: 623 HGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
+ + VLLSN Y + G +ED S+R M+D G+K+ PG+S
Sbjct: 675 YSATYVLLSNTYIETGSYEDGLSLRNVMKDQGVKKEPGYS 714
>gi|225456755|ref|XP_002268980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74600,
chloroplastic [Vitis vinifera]
gi|297733984|emb|CBI15231.3| unnamed protein product [Vitis vinifera]
Length = 893
Score = 314 bits (805), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 196/661 (29%), Positives = 328/661 (49%), Gaps = 103/661 (15%)
Query: 6 FHSVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLI 65
FH +K + ++Y + S L C+ + + + Q+HS IFK+G ++ + ++LI
Sbjct: 334 FHFFKEMRKVGEKINNY--TITSVLTACTEPVMIKEAVQLHSWIFKTGFYLDSNVSSALI 391
Query: 66 NLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTS 125
N+Y+K G++ ++ +F RE+ K +
Sbjct: 392 NMYSKIGVVDLSERVF---------------------------REM---ESTKNLAMWAV 421
Query: 126 MIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVIS--SSVHLGGIWECRMLHGLVIK 183
MI FAQ+ A+E+F+ M G+ P++ +SV+S S+ LG R++H ++K
Sbjct: 422 MISAFAQSGSTGRAVELFQRMLQEGLRPDKFCSSSVLSIIDSLSLG-----RLIHCYILK 476
Query: 184 LMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELAREL 243
+ + + + ++L MY C SL E+ ++F
Sbjct: 477 IGLFTDISVGSSLFTMYSKCGSLEESYTVF------------------------------ 506
Query: 244 FERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAF 303
E++P KD VSW +MI G+ + + +A+ ++R ML + I P+ + + ++AC +
Sbjct: 507 -EQMPDKDNVSWASMITGFSEHDHAEQAVQLFREMLLEEIRPDQMTLTAALTACSALHSL 565
Query: 304 GEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGF 363
+G ++H ++A + +++ Y+ CG I LAR
Sbjct: 566 EKGKEVHGYALRARVGKEVLVGGALVNMYSKCGAIVLAR--------------------- 604
Query: 364 IRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMV 423
++F+ + ++D +S S+++SGYAQN AL LFH + A + + T+
Sbjct: 605 ----------RVFDMLPQKDQFSCSSLVSGYAQNGYIEDALLLFHEIRMADLWIDSFTVS 654
Query: 424 SVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDR 483
SV A+A +L G H V + ++ ++++ MY+KCGSI+ +VF I
Sbjct: 655 SVIGAVAILNSLDIGTQLHACVTKMGLNAEVSVGSSLVTMYSKCGSIDECHKVFEQIEK- 713
Query: 484 TTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGER 543
+ W A+I A HG LK+Y + K K +S+TF+GVLS C H G+V+ G
Sbjct: 714 -PDLISWTAMIVSYAQHGKGAEALKVYDLMRKEGTKPDSVTFVGVLSACSHNGMVEEGYS 772
Query: 544 YFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIH 603
+ SM Y +EP HY CMVDLLGR+G+L++AE I +MP++ D ++WG LLAA ++H
Sbjct: 773 HLNSMAKEYGIEPGYYHYACMVDLLGRSGRLKEAERFINNMPIEPDALLWGILLAACKVH 832
Query: 604 GNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSG 663
G++E+G AAK + L+P + V LSNI AD G WED IR M G+K+ PG+S
Sbjct: 833 GDIELGRLAAKRVIELEPCEAGAYVTLSNICADMGWWEDVMKIRSLMEGTGVKKEPGWSS 892
Query: 664 V 664
V
Sbjct: 893 V 893
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 126/562 (22%), Positives = 237/562 (42%), Gaps = 102/562 (18%)
Query: 28 SALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTL 87
S L C+A + G+ ++SL K+G SN +++ +I+L+AK A +F
Sbjct: 152 SVLSACTALGSPLYGELVYSLALKNGFFSNGYVRAGMIDLFAKLCSFEDALRVFQDVLCE 211
Query: 88 DPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMR 147
+ V N +ISG ++N + W AL++F M
Sbjct: 212 NVVCWNAIISGAVKN------------------------------RENWV-ALDLFCQMC 240
Query: 148 ILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLV 207
+PN T +S++++ L + R + G VIK V + T ++++Y C +
Sbjct: 241 CRFFMPNSFTFSSILTACAALEELEFGRGVQGWVIKCGAGEDVFVGTAIIDLYAKCRDMD 300
Query: 208 EARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVER 267
+A F M RN+VSW T+I G++Q +
Sbjct: 301 QAVKEFLRMPIRNVVSWT-------------------------------TIISGFVQKDD 329
Query: 268 LSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQAT 327
A ++ M G N+ I +++AC + E +Q+HS I K GF + +
Sbjct: 330 SISAFHFFKEMRKVGEKINNYTITSVLTACTEPVMIKEAVQLHSWIFKTGFYLDSNVSSA 389
Query: 328 IIHFYAACGRINLARLQF-ELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYS 386
+I+ Y+ G ++L+ F E+ ++A W +I+ F
Sbjct: 390 LINMYSKIGVVDLSERVFREMESTKNLAMWAVMISAF----------------------- 426
Query: 387 WSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVL 446
AQ+ A+ELF M+ G++P++ SV I S L GR H Y+L
Sbjct: 427 --------AQSGSTGRAVELFQRMLQEGLRPDKFCSSSVLSIIDS---LSLGRLIHCYIL 475
Query: 447 NNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLT 506
+ + ++ +++ MY+KCGS+ ++ VF + D+ W ++I G + H A
Sbjct: 476 KIGLFTDISVGSSLFTMYSKCGSLEESYTVFEQMPDKDN--VSWASMITGFSEHDHAEQA 533
Query: 507 LKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLG-ERYFKSMKSVYNVEPDLKHYGCMV 565
++++ ++ I+ + +T L+ C ++ G E + ++++ V ++ G +V
Sbjct: 534 VQLFREMLLEEIRPDQMTLTAALTACSALHSLEKGKEVHGYALRA--RVGKEVLVGGALV 591
Query: 566 DLLGRAGQLEDAEEVIRSMPMK 587
++ + G + A V +P K
Sbjct: 592 NMYSKCGAIVLARRVFDMLPQK 613
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 135/566 (23%), Positives = 226/566 (39%), Gaps = 104/566 (18%)
Query: 45 IHSLIFKSG-LESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRND 103
+H+ K+ L+SNTF+ NSL+ Y K ++
Sbjct: 67 LHAHFLKTAILQSNTFMTNSLMGWYCK-------------------------------SN 95
Query: 104 RLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVIS 163
+ A +FDKTP +S+ +I G QN + ++ F MR G PN+ T SV+S
Sbjct: 96 SMVHALRLFDKTPHPNVISWNILISGCNQNFSFEDSWRNFCKMRFSGFDPNQFTYGSVLS 155
Query: 164 SSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVS 223
+ LG +++ L +K +GF N Y
Sbjct: 156 ACTALGSPLYGELVYSLALK---NGF------FSNGYVRAG------------------- 187
Query: 224 WNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGI 283
M++ FAK E A +F+ + ++VV W +I G ++ AL ++ M C
Sbjct: 188 ---MIDLFAKLCSFEDALRVFQDVLCENVVCWNAIISGAVKNRENWVALDLFCQMCCRFF 244
Query: 284 APNDVMIVDLISACG--RAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLA 341
PN +++AC + FG G+Q I AG D F+ II YA C ++ A
Sbjct: 245 MPNSFTFSSILTACAALEELEFGRGVQGWVIKCGAGEDV--FVGTAIIDLYAKCRDMDQA 302
Query: 342 RLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPN 401
+ F+R M R+V SW+ +ISG+ Q +
Sbjct: 303 ------------------VKEFLR-------------MPIRNVVSWTTIISGFVQKDDSI 331
Query: 402 MALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAII 461
A F M G K N T+ SV A +KE H ++ L+ N+S+A+I
Sbjct: 332 SAFHFFKEMRKVGEKINNYTITSVLTACTEPVMIKEAVQLHSWIFKTGFYLDSNVSSALI 391
Query: 462 DMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLN 521
+MY+K G ++ + VF + + T +++ W +I A G ++++ + + ++ +
Sbjct: 392 NMYSKIGVVDLSERVFREM-ESTKNLAMWAVMISAFAQSGSTGRAVELFQRMLQEGLRPD 450
Query: 522 SITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVI 581
VLS L L Y + + D+ + + + G LE++ V
Sbjct: 451 KFCSSSVLSIIDSLSLGRLIHCYILKI----GLFTDISVGSSLFTMYSKCGSLEESYTVF 506
Query: 582 RSMPMKADVVIWGTLLAASRIHGNVE 607
MP K D V W +++ H + E
Sbjct: 507 EQMPDK-DNVSWASMITGFSEHDHAE 531
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 98/435 (22%), Positives = 191/435 (43%), Gaps = 42/435 (9%)
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYL 263
+ ++ A L + + N N ++ + K+ + A LF++ P +V+SW +I G
Sbjct: 64 TKILHAHFLKTAILQSNTFMTNSLMGWYCKSNSMVHALRLFDKTPHPNVISWNILISGCN 123
Query: 264 QVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDF 323
Q ++ + M G PN ++SAC + G ++S+ +K GF +
Sbjct: 124 QNFSFEDSWRNFCKMRFSGFDPNQFTYGSVLSACTALGSPLYGELVYSLALKNGFFSNGY 183
Query: 324 IQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRD 383
++A +I +A A F+ + +++ WNA+I+G ++N R+
Sbjct: 184 VRAGMIDLFAKLCSFEDALRVFQDVLCENVVCWNAIISGAVKN------RE--------- 228
Query: 384 VYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHE 443
+W +AL+LF M PN T S+ A A+ L+ GR
Sbjct: 229 --NW--------------VALDLFCQMCCRFFMPNSFTFSSILTACAALEELEFGRGVQG 272
Query: 444 YVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDA 503
+V+ + + AIID+YAKC ++ A + F + R +V W II G D+
Sbjct: 273 WVIKCGAGEDVFVGTAIIDLYAKCRDMDQAVKEFLRMPIR--NVVSWTTIISGFVQKDDS 330
Query: 504 NLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSM-KSVYNVEPDLKHYG 562
+ ++ K K+N+ T VL+ C ++ + + K+ + ++ ++
Sbjct: 331 ISAFHFFKEMRKVGEKINNYTITSVLTACTEPVMIKEAVQLHSWIFKTGFYLDSNVS--S 388
Query: 563 CMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGN----VEVGERAAKSLAG 618
++++ + G ++ +E V R M ++ +W +++A G+ VE+ +R + G
Sbjct: 389 ALINMYSKIGVVDLSERVFREMESTKNLAMWAVMISAFAQSGSTGRAVELFQRMLQE--G 446
Query: 619 LQPSHGPSRVLLSNI 633
L+P S +LS I
Sbjct: 447 LRPDKFCSSSVLSII 461
>gi|225448607|ref|XP_002274158.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 820
Score = 314 bits (805), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 197/640 (30%), Positives = 311/640 (48%), Gaps = 92/640 (14%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
+ A + ++ C ++ G+ +H+ I G ++ F+ SL+N+YAK G I + +F+
Sbjct: 221 KFAYSAIIQSCIGLDSLELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFN 280
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+ + V+ N MISG C S N EA ++
Sbjct: 281 MMTEHNQVSWNAMISG---------------------CTS----------NGLHLEAFDL 309
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
F M+ PN TL SV + L + + + +L I+G V++ T L++MY
Sbjct: 310 FVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEGNVLVGTALIDMYSK 369
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
C SL +ARS+FD F G+ P W MI GY
Sbjct: 370 CGSLHDARSVFD--------------TNFINCGV---------NTP------WNAMISGY 400
Query: 263 LQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD 322
Q EAL +Y M +GI + + +A + + G +H +++K G D
Sbjct: 401 SQSGCSQEALELYVQMCQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMV 460
Query: 323 FIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKR 382
++ NA+ + + G +ED R++F+ M++R
Sbjct: 461 ------------------------------VSVNNAIADAYSKCGFLEDVRKVFDRMEER 490
Query: 383 DVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAH 442
D+ SW+ +++ Y+Q+ AL F M + G PN+ T SV + AS L+ GR H
Sbjct: 491 DIVSWTTLVTAYSQSSLGEEALATFCLMREEGFAPNQFTFSSVLISCASLCFLEYGRQVH 550
Query: 443 EYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGD 502
+ + + +A+IDMYAKCGSI A +VF I + + W AII G A HG
Sbjct: 551 GLLCKAGLDTEKCIESALIDMYAKCGSITEAGKVFDKISN--PDIVSWTAIISGYAQHGL 608
Query: 503 ANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYG 562
L+++ +E IK N++T + VL C H G+V+ G YF+ M+ Y V P+++HY
Sbjct: 609 VEDALQLFRRMELSGIKANAVTLLCVLFACSHGGMVEEGLFYFQQMEDGYGVVPEMEHYA 668
Query: 563 CMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPS 622
C++DLLGR G+L+DA E IR MPM+ + ++W TLL R+HGNVE+GE AA+ + ++P
Sbjct: 669 CIIDLLGRVGRLDDAMEFIRKMPMEPNEMVWQTLLGGCRVHGNVELGEIAARKILSIRPE 728
Query: 623 HGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
+ + VLLSN Y + G +ED S+R M+D G+K+ PG+S
Sbjct: 729 YSATYVLLSNTYIETGSYEDGLSLRNVMKDQGVKKEPGYS 768
>gi|357127483|ref|XP_003565409.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Brachypodium distachyon]
Length = 552
Score = 314 bits (805), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 168/437 (38%), Positives = 256/437 (58%), Gaps = 9/437 (2%)
Query: 231 FAKAGLVELARELFERIPSK---DVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPND 287
+A G +AR L + P++ V W +I G+ + + + + M+ G+ P
Sbjct: 64 YAARGDGAVARTLLDAWPARGGDTPVVWNALISGHRRSRQFRLSCCSFVDMVRTGVVPTP 123
Query: 288 VMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFEL 347
V + ++SACG+ G+Q+H +V +G + +I YA C ++ A FE
Sbjct: 124 VTYITVLSACGKDKYIWLGMQVHKCVVASGVLPDLKVGNALIDMYAECSEMDAAWELFEG 183
Query: 348 GIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELF 407
+ SW ++I+GF+R G ++ AR LF+ M +RD SW+AMI GY Q Q ALE+F
Sbjct: 184 MEVRNTVSWTSVISGFLRLGQVDQARTLFDCMPERDTVSWTAMIDGYVQAGQFREALEMF 243
Query: 408 HGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKC 467
M + V+ +E TMVSV A A G L+ G WA Y+ + I ++ + A++DMY+KC
Sbjct: 244 REMQFSKVRADEFTMVSVVTACAQLGALETGEWARIYMSRHGIKMDTFVGNALVDMYSKC 303
Query: 468 GSINTAFEVF--YHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITF 525
GSI A VF +IRD+ T W A+I GLA++G + ++ + + + +TF
Sbjct: 304 GSIQQALGVFKEMYIRDKFT----WTAVILGLAVNGHGEEAINMFYRMLRVFEAPDEVTF 359
Query: 526 IGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMP 585
IGVL+ C HAGLVD G +F SM Y + P++ H+GC++DLLGRAG+L++A E I +MP
Sbjct: 360 IGVLTACTHAGLVDKGRDFFLSMTGSYGIAPNVMHFGCLIDLLGRAGKLKEALETIGNMP 419
Query: 586 MKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFS 645
M+ + IWGTLLAA R+HGN E+G+ AA+ L L +G +LLSN+YA + RWED
Sbjct: 420 MRPNSAIWGTLLAACRVHGNSEIGQLAAEHLLELDTENGMVYILLSNLYAKSNRWEDVRR 479
Query: 646 IRKEMRDCGMKRLPGFS 662
+R+ + + G+K+ PG S
Sbjct: 480 LRQVIMEKGIKKEPGCS 496
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 124/472 (26%), Positives = 211/472 (44%), Gaps = 75/472 (15%)
Query: 42 GQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTL---DPVACNIMISG 98
G +H+ + K G+E N + +SL+ +YA G + A+++ D+ PV N +ISG
Sbjct: 38 GDAVHAHVVKFGMELNAHVASSLVLMYAARGDGAVARTLLDAWPARGGDTPVVWNALISG 97
Query: 99 YIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTL 158
+ R+ + + CC F DM GV+P VT
Sbjct: 98 HRRSRQFR----------LSCC---------------------SFVDMVRTGVVPTPVTY 126
Query: 159 ASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKE 218
+V+S+ IW +H V+ + + + L++MY CS + A LF+ M+
Sbjct: 127 ITVLSACGKDKYIWLGMQVHKCVVASGVLPDLKVGNALIDMYAECSEMDAAWELFEGMEV 186
Query: 219 RNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAM 278
RN VSW +++GF + G V+ AR LF+ +P +D VSW MIDGY+Q + EAL M+R M
Sbjct: 187 RNTVSWTSVISGFLRLGQVDQARTLFDCMPERDTVSWTAMIDGYVQAGQFREALEMFREM 246
Query: 279 LCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRI 338
+ ++ +V +++AC + A G + + G F+ ++ Y+ CG I
Sbjct: 247 QFSKVRADEFTMVSVVTACAQLGALETGEWARIYMSRHGIKMDTFVGNALVDMYSKCGSI 306
Query: 339 NLARLQF-ELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQN 397
A F E+ I+D +W A+I G NG E+A +F M
Sbjct: 307 QQALGVFKEMYIRDKF-TWTAVILGLAVNGHGEEAINMFYRM------------------ 347
Query: 398 EQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNS----ITLN 453
L +F P+E+T + V A +G + +GR ++ L+ + I N
Sbjct: 348 ------LRVFEA-------PDEVTFIGVLTACTHAGLVDKGR---DFFLSMTGSYGIAPN 391
Query: 454 DNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANL 505
+ID+ + G + A E ++ R S + W ++ +HG++ +
Sbjct: 392 VMHFGCLIDLLGRAGKLKEALETIGNMPMRPNS-AIWGTLLAACRVHGNSEI 442
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 148/291 (50%), Gaps = 13/291 (4%)
Query: 27 VSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCST 86
++ L C + G Q+H + SG+ + + N+LI++YA+C + A +F+
Sbjct: 127 ITVLSACGKDKYIWLGMQVHKCVVASGVLPDLKVGNALIDMYAECSEMDAAWELFEGMEV 186
Query: 87 LDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDM 146
+ V+ +ISG++R +++ AR +FD P + VS+T+MI G+ Q +REALE+FR+M
Sbjct: 187 RNTVSWTSVISGFLRLGQVDQARTLFDCMPERDTVSWTAMIDGYVQAGQFREALEMFREM 246
Query: 147 RILGVIPNEVTLASVISSSVHLG----GIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
+ V +E T+ SV+++ LG G W + IK+ D FV L++MY
Sbjct: 247 QFSKVRADEFTMVSVVTACAQLGALETGEWARIYMSRHGIKM--DTFV--GNALVDMYSK 302
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERI----PSKDVVSWGTM 258
C S+ +A +F EM R+ +W ++ G A G E A +F R+ + D V++ +
Sbjct: 303 CGSIQQALGVFKEMYIRDKFTWTAVILGLAVNGHGEEAINMFYRMLRVFEAPDEVTFIGV 362
Query: 259 IDGYLQVERLSEALTMYRAMLCD-GIAPNDVMIVDLISACGRAMAFGEGLQ 308
+ + + + +M GIAPN + LI GRA E L+
Sbjct: 363 LTACTHAGLVDKGRDFFLSMTGSYGIAPNVMHFGCLIDLLGRAGKLKEALE 413
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 88/195 (45%), Gaps = 36/195 (18%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E +VS + C+ A+ G+ + + G++ +TF+ N+L+++Y+KCG I QA +F
Sbjct: 255 EFTMVSVVTACAQLGALETGEWARIYMSRHGIKMDTFVGNALVDMYSKCGSIQQALGVFK 314
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
YIR+ ++T++I+G A N EA+ +
Sbjct: 315 EM--------------YIRDK-----------------FTWTAVILGLAVNGHGEEAINM 343
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
F M + P+EVT V+++ H G + + R L + G I+ N+++ C+
Sbjct: 344 FYRMLRVFEAPDEVTFIGVLTACTHAGLVDKGRDFF-----LSMTGSYGIAPNVMHFGCL 398
Query: 203 CSSLVEARSLFDEMK 217
L A L + ++
Sbjct: 399 IDLLGRAGKLKEALE 413
>gi|225432410|ref|XP_002276935.1| PREDICTED: pentatricopeptide repeat-containing protein At2g36980,
mitochondrial-like [Vitis vinifera]
Length = 623
Score = 314 bits (805), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 178/562 (31%), Positives = 304/562 (54%), Gaps = 6/562 (1%)
Query: 104 RLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVIS 163
R+ AR +FD+ P K V++ +M+ ++Q ++AL +F MRI P+ T + +S
Sbjct: 20 RITSARRLFDEMPHKDTVAWNAMLASYSQLGLHQQALCLFHHMRIANSRPDRFTFTATLS 79
Query: 164 SSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVS 223
+ LG + +H V+ + + +L++MY C S AR +F+EM N VS
Sbjct: 80 ACAGLGELRRGMKIHAQVVVSGCQSSLPVGNSLIDMYGKCLSATSARRVFEEMSIMNEVS 139
Query: 224 WNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGI 283
W +L + +GL ++AR +F+ +P K ++W MI GY Q + L +++ M D +
Sbjct: 140 WCSLLFAYTSSGLFDVARVVFDGMPKKVEIAWNIMISGYGQCGDVELCLGLFKKMREDSL 199
Query: 284 APNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACG-RINLAR 342
P+ L++A G +H I+K+G+ + +I+ FY+ G + ++ +
Sbjct: 200 QPDQWTFSALVNALCELQEPSYGYMMHGFIIKSGWVKAVEVSNSILSFYSKLGCKDDVMK 259
Query: 343 LQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNM 402
+ +GI + SWNA+I ++ G +A +F +++V SW++MI+GYA+N
Sbjct: 260 VFESIGILTQV-SWNAMIDAHMKIGDTHEAFLVFQLAPEKNVVSWTSMITGYARNGHGEQ 318
Query: 403 ALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIID 462
AL F M++ ++P++ T +V A +S TL G+ H +++ ++ +++
Sbjct: 319 ALSFFVKMMENHIQPDDFTFGAVLHACSSLATLGHGKMIHGSIIHYGFHAYVDVGNGLVN 378
Query: 463 MYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNS 522
MYAKCG I + F I + + WNA++ GL MHG A L++Y ++ +K +
Sbjct: 379 MYAKCGDIQGSNTAFKEILGK--DLVSWNAMLFGLGMHGHATQALELYEEMVASGMKPDK 436
Query: 523 ITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVI- 581
+TFIG+L TC H+GL++ G+ F+SM SVY + + +H CMVDLLGR G L A E++
Sbjct: 437 VTFIGLLMTCSHSGLIEKGQALFESMVSVYGLSQETEHVVCMVDLLGRGGYLAQARELVD 496
Query: 582 -RSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRW 640
S +A+ + LL A H V +G + L +P S VLLSN+Y +G+W
Sbjct: 497 EYSRTGRAETSLPEALLGACFAHSEVRMGANLGEYLKVFEPQKEMSYVLLSNLYCVSGQW 556
Query: 641 EDAFSIRKEMRDCGMKRLPGFS 662
++A +RK M D G+K++PG S
Sbjct: 557 KEAEMVRKTMTDHGVKKMPGCS 578
Score = 172 bits (436), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 116/454 (25%), Positives = 214/454 (47%), Gaps = 32/454 (7%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+ L C+ + +G +IH+ + SG +S+ + NSLI++Y KC + A+ +F+
Sbjct: 72 FTFTATLSACAGLGELRRGMKIHAQVVVSGCQSSLPVGNSLIDMYGKCLSATSARRVFEE 131
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
S ++ V+ ++ Y + + AR VFD P K +++ MI G+ Q L +F
Sbjct: 132 MSIMNEVSWCSLLFAYTSSGLFDVARVVFDGMPKKVEIAWNIMISGYGQCGDVELCLGLF 191
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
+ MR + P++ T ++++++ L M+HG +IK V +S ++L+ Y
Sbjct: 192 KKMREDSLQPDQWTFSALVNALCELQEPSYGYMMHGFIIKSGWVKAVEVSNSILSFYSKL 251
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYL 263
+ +F+ + VSWN M++ K G A +F+ P K+VVSW +MI GY
Sbjct: 252 GCKDDVMKVFESIGILTQVSWNAMIDAHMKIGDTHEAFLVFQLAPEKNVVSWTSMITGYA 311
Query: 264 QVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDF 323
+ +AL+ + M+ + I P+D ++ AC G G IH I+ GF Y
Sbjct: 312 RNGHGEQALSFFVKMMENHIQPDDFTFGAVLHACSSLATLGHGKMIHGSIIHYGFHAYVD 371
Query: 324 IQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRD 383
+ +++ YA CG I + F+ + + SWNA++ G GM A Q
Sbjct: 372 VGNGLVNMYAKCGDIQGSNTAFKEILGKDLVSWNAMLFGL---GMHGHATQ--------- 419
Query: 384 VYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHE 443
ALEL+ MV +G+KP+++T + + + SG +++G+ E
Sbjct: 420 -------------------ALELYEEMVASGMKPDKVTFIGLLMTCSHSGLIEKGQALFE 460
Query: 444 YVLN-NSITLNDNLSAAIIDMYAKCGSINTAFEV 476
+++ ++ ++D+ + G + A E+
Sbjct: 461 SMVSVYGLSQETEHVVCMVDLLGRGGYLAQAREL 494
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 108/436 (24%), Positives = 189/436 (43%), Gaps = 61/436 (13%)
Query: 231 FAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMI 290
AK G + AR LF+ +P KD V+W M+ Y Q+ +AL ++ M P+
Sbjct: 15 LAKLGRITSARRLFDEMPHKDTVAWNAMLASYSQLGLHQQALCLFHHMRIANSRPDRFTF 74
Query: 291 VDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQF-ELGI 349
+SAC G++IH+ +V +G + ++I Y C AR F E+ I
Sbjct: 75 TATLSACAGLGELRRGMKIHAQVVVSGCQSSLPVGNSLIDMYGKCLSATSARRVFEEMSI 134
Query: 350 KDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHG 409
+ + SW +L+ + +G+ + AR +F+ M K+ +W+ MISGY Q + L LF
Sbjct: 135 MNEV-SWCSLLFAYTSSGLFDVARVVFDGMPKKVEIAWNIMISGYGQCGDVELCLGLFKK 193
Query: 410 MVDAGVKPNEIT---MVSVFCAI--ASSGTLKEG-----RWAHEYVLNNSI--------- 450
M + ++P++ T +V+ C + S G + G W ++NSI
Sbjct: 194 MREDSLQPDQWTFSALVNALCELQEPSYGYMMHGFIIKSGWVKAVEVSNSILSFYSKLGC 253
Query: 451 ------------TLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLA 498
L A+ID + K G + AF VF ++ +V W ++I G A
Sbjct: 254 KDDVMKVFESIGILTQVSWNAMIDAHMKIGDTHEAFLVFQLAPEK--NVVSWTSMITGYA 311
Query: 499 MHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDL 558
+G L + + + +I+ + TF VL C + L LG + +
Sbjct: 312 RNGHGEQALSFFVKMMENHIQPDDFTFGAVLHAC--SSLATLGHGKM--------IHGSI 361
Query: 559 KHYGC---------MVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGN---- 605
HYG +V++ + G ++ + + + + D+V W +L +HG+
Sbjct: 362 IHYGFHAYVDVGNGLVNMYAKCGDIQGSNTAFKEI-LGKDLVSWNAMLFGLGMHGHATQA 420
Query: 606 VEVGERAAKSLAGLQP 621
+E+ E S G++P
Sbjct: 421 LELYEEMVAS--GMKP 434
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 91/214 (42%), Gaps = 29/214 (13%)
Query: 349 IKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFH 408
+ H+ + I + G I AR+LF+ M +D +W+AM++ Y+Q AL LFH
Sbjct: 1 MHSHLFQTTSKIVALAKLGRITSARRLFDEMPHKDTVAWNAMLASYSQLGLHQQALCLFH 60
Query: 409 GMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCG 468
M A +P+ T + A A G L+ G H V+ + + + ++IDMY KC
Sbjct: 61 HMRIANSRPDRFTFTATLSACAGLGELRRGMKIHAQVVVSGCQSSLPVGNSLIDMYGKCL 120
Query: 469 SINTAFEVFYH--IRDRTTSVS---------------------------PWNAIICGLAM 499
S +A VF I + + S WN +I G
Sbjct: 121 SATSARRVFEEMSIMNEVSWCSLLFAYTSSGLFDVARVVFDGMPKKVEIAWNIMISGYGQ 180
Query: 500 HGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCC 533
GD L L ++ + + +++ + TF +++ C
Sbjct: 181 CGDVELCLGLFKKMREDSLQPDQWTFSALVNALC 214
>gi|15228117|ref|NP_181268.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216848|sp|Q9ZUT5.1|PP191_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g37310
gi|4056485|gb|AAC98051.1| hypothetical protein [Arabidopsis thaliana]
gi|110741249|dbj|BAF02175.1| hypothetical protein [Arabidopsis thaliana]
gi|330254288|gb|AEC09382.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 657
Score = 314 bits (805), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 178/632 (28%), Positives = 318/632 (50%), Gaps = 80/632 (12%)
Query: 44 QIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRND 103
Q+H+ I ++ + F+ + LI+ Y + D
Sbjct: 43 QLHARIVVFSIKPDNFLASKLISFYTR-------------------------------QD 71
Query: 104 RLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILG--------VIPNE 155
R A VFD+ ++ SY ++++ + + + +A +F + +G P+
Sbjct: 72 RFRQALHVFDEITVRNAFSYNALLIAYTSREMYFDAFSLF--LSWIGSSCYSSDAARPDS 129
Query: 156 VTLASVISSSVHLGGIW---ECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSL 212
++++ V+ + W R +HG VI+ D V + ++ Y C ++ AR +
Sbjct: 130 ISISCVLKALSGCDDFWLGSLARQVHGFVIRGGFDSDVFVGNGMITYYTKCDNIESARKV 189
Query: 213 FDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEAL 272
FDEM ER++VSWN M++G++++G E ++
Sbjct: 190 FDEMSERDVVSWNSMISGYSQSGSFEDCKK------------------------------ 219
Query: 273 TMYRAML-CDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHF 331
MY+AML C PN V ++ + ACG++ GL++H +++ + +I F
Sbjct: 220 -MYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGF 278
Query: 332 YAACGRINLARLQF-ELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAM 390
YA CG ++ AR F E+ KD + ++ A+I+G++ +G++++A LF+ M+ + +W+AM
Sbjct: 279 YAKCGSLDYARALFDEMSEKDSV-TYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAM 337
Query: 391 ISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSI 450
ISG QN + F M+ G +PN +T+ S+ ++ S LK G+ H + + N
Sbjct: 338 ISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGA 397
Query: 451 TLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIY 510
N ++ +IID YAK G + A VF + +DR S+ W AII A+HGD++ ++
Sbjct: 398 DNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDR--SLIAWTAIITAYAVHGDSDSACSLF 455
Query: 511 SDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGR 570
++ K + +T VLS H+G D+ + F SM + Y++EP ++HY CMV +L R
Sbjct: 456 DQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSR 515
Query: 571 AGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLL 630
AG+L DA E I MP+ +WG LL + + G++E+ A L ++P + + ++
Sbjct: 516 AGKLSDAMEFISKMPIDPIAKVWGALLNGASVLGDLEIARFACDRLFEMEPENTGNYTIM 575
Query: 631 SNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
+N+Y AGRWE+A +R +M+ G+K++PG S
Sbjct: 576 ANLYTQAGRWEEAEMVRNKMKRIGLKKIPGTS 607
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 127/484 (26%), Positives = 217/484 (44%), Gaps = 75/484 (15%)
Query: 26 LVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCS 85
++ AL C S +Q+H + + G +S+ F+ N +I Y KC I A+ +FD S
Sbjct: 135 VLKALSGCDDFWLGSLARQVHGFVIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMS 194
Query: 86 TLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRD 145
D V+ N MISGY ++ D ++++ K + C D
Sbjct: 195 ERDVVSWNSMISGYSQSGSFEDCKKMY-KAMLACS------------------------D 229
Query: 146 MRILGVIPNEVTLASVISSSVHLGGIWECRMLHGL-VIKLMIDGFVIISTNLLN----MY 200
+ PN VT+ SV + ++ GL V K MI+ + + +L N Y
Sbjct: 230 FK-----PNGVTVISVFQACGQ-----SSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFY 279
Query: 201 CVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMID 260
C SL AR+LFDEM E++ V++ +++G+ GLV+ A LF + S + +W MI
Sbjct: 280 AKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMIS 339
Query: 261 GYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDC 320
G +Q E + +R M+ G PN V + L+ + + G +IH+ ++ G D
Sbjct: 340 GLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADN 399
Query: 321 YDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ 380
++ +II N A+L F LG A+++F+N +
Sbjct: 400 NIYVTTSIID--------NYAKLGFLLG-----------------------AQRVFDNCK 428
Query: 381 KRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRW 440
R + +W+A+I+ YA + + A LF M G KP+++T+ +V A A SG +
Sbjct: 429 DRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQH 488
Query: 441 AHEYVLNN-SITLNDNLSAAIIDMYAKCGSINTAFEVFYHIR-DRTTSVSPWNAIICGLA 498
+ +L I A ++ + ++ G ++ A E + D V W A++ G +
Sbjct: 489 IFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFISKMPIDPIAKV--WGALLNGAS 546
Query: 499 MHGD 502
+ GD
Sbjct: 547 VLGD 550
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 85/380 (22%), Positives = 181/380 (47%), Gaps = 16/380 (4%)
Query: 14 KANLQNSDYE---LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAK 70
KA L SD++ + ++S + C + G ++H + ++ ++ + + N++I YAK
Sbjct: 222 KAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAK 281
Query: 71 CGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGF 130
CG + A+++FD S D V +ISGY+ + + +A +F + ++ +MI G
Sbjct: 282 CGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGL 341
Query: 131 AQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFV 190
QN+ E + FR+M G PN VTL+S++ S + + + +H I+ D +
Sbjct: 342 MQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNI 401
Query: 191 IISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERI--- 247
++T++++ Y L+ A+ +FD K+R++++W ++ +A G + A LF+++
Sbjct: 402 YVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCL 461
Query: 248 -PSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCD-GIAPNDVMIVDLISACGRAMAFGE 305
D V+ ++ + A ++ +ML I P ++S RA +
Sbjct: 462 GTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSD 521
Query: 306 GLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQ----FELGIKDHIASWNALIA 361
++ I K D + +++ + G + +AR FE+ ++ ++ +
Sbjct: 522 AME---FISKMPIDPIAKVWGALLNGASVLGDLEIARFACDRLFEME-PENTGNYTIMAN 577
Query: 362 GFIRNGMIEDARQLFNNMQK 381
+ + G E+A + N M++
Sbjct: 578 LYTQAGRWEEAEMVRNKMKR 597
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 121/305 (39%), Gaps = 33/305 (10%)
Query: 307 LQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRN 366
LQ+H+ IV +F+ + +I FY R A F+ + S+NAL+ +
Sbjct: 42 LQLHARIVVFSIKPDNFLASKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSR 101
Query: 367 GMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVF 426
M DA LF + YS A +P+ I++ V
Sbjct: 102 EMYFDAFSLFLSWIGSSCYSSDA-------------------------ARPDSISISCVL 136
Query: 427 CAIASSGTLKEG---RWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDR 483
A++ G R H +V+ + + +I Y KC +I +A +VF + +R
Sbjct: 137 KALSGCDDFWLGSLARQVHGFVIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSER 196
Query: 484 TTSVSPWNAIICGLAMHGDANLTLKIYSD-LEKRNIKLNSITFIGVLSTCCHAGLVDLGE 542
V WN++I G + G K+Y L + K N +T I V C + + G
Sbjct: 197 --DVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGL 254
Query: 543 RYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRI 602
K M + ++ DL ++ + G L+ A + M K D V +G +++
Sbjct: 255 EVHKKMIENH-IQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEK-DSVTYGAIISGYMA 312
Query: 603 HGNVE 607
HG V+
Sbjct: 313 HGLVK 317
>gi|242092246|ref|XP_002436613.1| hypothetical protein SORBIDRAFT_10g005800 [Sorghum bicolor]
gi|241914836|gb|EER87980.1| hypothetical protein SORBIDRAFT_10g005800 [Sorghum bicolor]
Length = 683
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 203/646 (31%), Positives = 313/646 (48%), Gaps = 102/646 (15%)
Query: 21 DYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSM 80
D+ L+L AL+ C G ++H K G ++ F+ NSL+++YAK G
Sbjct: 133 DFVLSL--ALKACIRSADYGYGTRLHCDAVKVG-GADGFVMNSLVDMYAKAG-------- 181
Query: 81 FDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREAL 140
L AR+VF++ P + VS+TSM+ G QN + L
Sbjct: 182 -----------------------DLECARKVFERIPGRNVVSWTSMLSGCVQNGFAADGL 218
Query: 141 EVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIK--LMIDGFVIISTNLLN 198
+F MR V P+E T+A+VI++ L G+ + R +HG VIK LM + F IS LL+
Sbjct: 219 LLFNKMRQDNVPPSEYTIATVITACSALIGLHQGRWMHGSVIKQGLMSNSF--ISAALLD 276
Query: 199 MYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTM 258
M + K G +E A+ +F+ + D+V W TM
Sbjct: 277 M-------------------------------YVKCGELEDAQCVFDELSYIDLVLWTTM 305
Query: 259 IDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGF 318
I GY Q +AL ++ I PN V I ++SA + G IH I VK G
Sbjct: 306 IVGYTQNGNPLDALRLFLDKKFANIVPNSVTIATVLSASAQLRDLSLGRSIHGIAVKLGL 365
Query: 319 DCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNN 378
Y + ++ YA C ++ +A ++F +
Sbjct: 366 VEYTVVVNALVDMYAKCQAVS-------------------------------EANRIFGS 394
Query: 379 MQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG 438
+ +DV +W++M+SGYA+N N AL LF M G P+ I++V A G L G
Sbjct: 395 ISNKDVVAWNSMLSGYAENNMCNDALMLFKQMSLKGPSPDAISVVHALSASVCLGDLLIG 454
Query: 439 RWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLA 498
+ H Y + ++ N +S A++++Y KCG + +A VF + DR + W A+I G
Sbjct: 455 KSFHGYAVKHAFLSNIYVSTALLNLYNKCGDLPSARRVFDEMNDRNSVT--WCAMIGGYG 512
Query: 499 MHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDL 558
M GD+ ++ ++ ++ K + N + F +LSTC H G+V +RYF SM +N+ P +
Sbjct: 513 MQGDSAGSIDLFGEMLKDGVHPNDVAFTSILSTCSHTGMVTAAKRYFDSMAQHFNITPSM 572
Query: 559 KHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAG 618
KHY CMVD+L RAG LE+A E I +MPM+AD +WG L +H ++ GE A K +
Sbjct: 573 KHYACMVDVLARAGNLEEALEFIDNMPMQADTSVWGAFLHGCELHSRLQFGEEAIKRMMV 632
Query: 619 LQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
L P VL+SN+Y G WE + +IR+ M++ G+ +LPG+S +
Sbjct: 633 LHPERPDLYVLISNLYTSNGMWEKSQAIRRWMQEKGLVKLPGYSSI 678
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 123/497 (24%), Positives = 221/497 (44%), Gaps = 104/497 (20%)
Query: 9 VFNSQKA-NLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINL 67
+FN + N+ S+Y +A V + CSA I + QG+ +H + K GL SN+FI +L+++
Sbjct: 220 LFNKMRQDNVPPSEYTIATV--ITACSALIGLHQGRWMHGSVIKQGLMSNSFISAALLDM 277
Query: 68 YAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMI 127
Y KCG L DA+ VFD+ V +T+MI
Sbjct: 278 YVKCG-------------------------------ELEDAQCVFDELSYIDLVLWTTMI 306
Query: 128 MGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMID 187
+G+ QN +AL +F D + ++PN VT+A+V+S+S L + R +HG+ +KL +
Sbjct: 307 VGYTQNGNPLDALRLFLDKKFANIVPNSVTIATVLSASAQLRDLSLGRSIHGIAVKLGLV 366
Query: 188 GFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERI 247
+ ++ L++MY C ++ EA +F + +++V+WN ML+G+A+ +
Sbjct: 367 EYTVVVNALVDMYAKCQAVSEANRIFGSISNKDVVAWNSMLSGYAENNMC---------- 416
Query: 248 PSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGE-- 305
++AL +++ M G +P+ + +V +SA ++ G+
Sbjct: 417 ---------------------NDALMLFKQMSLKGPSPDAISVVHALSA---SVCLGDLL 452
Query: 306 -GLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFI 364
G H VK F ++ +++ Y CG + AR
Sbjct: 453 IGKSFHGYAVKHAFLSNIYVSTALLNLYNKCGDLPSAR---------------------- 490
Query: 365 RNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVS 424
++F+ M R+ +W AMI GY +++LF M+ GV PN++ S
Sbjct: 491 ---------RVFDEMNDRNSVTWCAMIGGYGMQGDSAGSIDLFGEMLKDGVHPNDVAFTS 541
Query: 425 VFCAIASSGTLKEG-RWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDR 483
+ + +G + R+ + +IT + A ++D+ A+ G++ A E F
Sbjct: 542 ILSTCSHTGMVTAAKRYFDSMAQHFNITPSMKHYACMVDVLARAGNLEEALE-FIDNMPM 600
Query: 484 TTSVSPWNAIICGLAMH 500
S W A + G +H
Sbjct: 601 QADTSVWGAFLHGCELH 617
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 101/380 (26%), Positives = 176/380 (46%), Gaps = 47/380 (12%)
Query: 227 MLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAP- 285
+L+ +A G + AR +F+ P D S+G M+ +Q ER +EA+ +++ M P
Sbjct: 70 LLSCYAALGDLASARMVFDGTPRPDAYSYGVMLWCLVQAERHAEAVALHQDMRRRRPCPE 129
Query: 286 --NDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARL 343
+D ++ + AC R+ +G G ++H VK G F+ +++ YA G + AR
Sbjct: 130 AQDDFVLSLALKACIRSADYGYGTRLHCDAVKVG-GADGFVMNSLVDMYAKAGDLECARK 188
Query: 344 QFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMA 403
FE ++ SW ++++G ++NG D LFN M++ +
Sbjct: 189 VFERIPGRNVVSWTSMLSGCVQNGFAADGLLLFNKMRQDN-------------------- 228
Query: 404 LELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDM 463
V P+E T+ +V A ++ L +GRW H V+ + N +SAA++DM
Sbjct: 229 -----------VPPSEYTIATVITACSALIGLHQGRWMHGSVIKQGLMSNSFISAALLDM 277
Query: 464 YAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSI 523
Y KCG + A VF + + W +I G +G+ L+++ D + NI NS+
Sbjct: 278 YVKCGELEDAQCVFDEL--SYIDLVLWTTMIVGYTQNGNPLDALRLFLDKKFANIVPNSV 335
Query: 524 TFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHY----GCMVDLLGRAGQLEDAEE 579
T VLS + LG +S+ + V+ L Y +VD+ + + +A
Sbjct: 336 TIATVLSASAQLRDLSLG----RSIHGI-AVKLGLVEYTVVVNALVDMYAKCQAVSEANR 390
Query: 580 VIRSMPMKADVVIWGTLLAA 599
+ S+ K DVV W ++L+
Sbjct: 391 IFGSISNK-DVVAWNSMLSG 409
>gi|357146237|ref|XP_003573921.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Brachypodium distachyon]
Length = 531
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 165/447 (36%), Positives = 255/447 (57%), Gaps = 8/447 (1%)
Query: 225 NVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIA 284
+L+ + G AR+LF+ +P++ +V+ M + + ++AL +++ M+ DG
Sbjct: 50 TALLSAYGALGRSGHARDLFDEMPNQSLVARTAMARAHAVSGQAAQALDLFQDMIADGFM 109
Query: 285 PNDVMIVDLISACGRAMAF----GEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINL 340
P++V + +++AC A + G +H+ IV G + F+ +I Y G + +
Sbjct: 110 PDNVALAVVLAACHGAGSCTARRSPGRMVHAFIVACGIEPDVFVSTELIRVYGERGEMTV 169
Query: 341 ARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQP 400
AR F+ +WN ++ ++RN IE A +LF M +RDV SW+ +I+GY +
Sbjct: 170 ARRVFDSMPTKSTIAWNTMVHQYVRNKDIEAAYRLFLAMPRRDVVSWNTVIAGYCLVGRC 229
Query: 401 NMALELFHGMVDAG---VKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLS 457
AL LF MV V PN TM +V A A +G L+ G W H Y+ N + N L
Sbjct: 230 KEALGLFRQMVSPSSCTVHPNGPTMSTVLSACAGAGCLETGIWVHLYIDKNQMNDNGTLD 289
Query: 458 AAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRN 517
+IDMYAKCGSI+ A +VF + S W +ICGLAMHG AN L+++S ++
Sbjct: 290 RCLIDMYAKCGSIDKALQVFEKAPGKRDLYS-WTTVICGLAMHGRANDVLRMFSMMQDSG 348
Query: 518 IKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDA 577
+ + +TF+GVL+ C H GLVD G +F SM+ Y + P ++HYGCM+DLLGR G+L +A
Sbjct: 349 MCPDDVTFVGVLNACAHGGLVDEGLHHFYSMQEKYRITPKIEHYGCMIDLLGRVGRLPEA 408
Query: 578 EEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADA 637
+I++MPMK ++VIWG L+A ++H +VE+GE AA + L P +RV++S++YA A
Sbjct: 409 YRMIQTMPMKPNMVIWGAFLSACKVHSSVELGEIAAAEVTRLDPDDPWARVMMSSMYAKA 468
Query: 638 GRWEDAFSIRKEMRDCGMKRLPGFSGV 664
W R+EM MK+ PG S V
Sbjct: 469 QDWSGLARERREMNSLQMKKTPGCSSV 495
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 125/486 (25%), Positives = 209/486 (43%), Gaps = 86/486 (17%)
Query: 35 AHIAVSQGQQIHSLIFKSGL-ESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACN 93
AH++ S IH L+FK+GL + + +L++ Y G
Sbjct: 25 AHLSASG---IHCLLFKAGLLHAGAHLPTALLSAYGALG--------------------- 60
Query: 94 IMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIP 153
R AR++FD+ P + V+ T+M A + +AL++F+DM G +P
Sbjct: 61 ----------RSGHARDLFDEMPNQSLVARTAMARAHAVSGQAAQALDLFQDMIADGFMP 110
Query: 154 NEVTLASVISSSVHLGGIW----ECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
+ V LA V+++ G RM+H ++ I+ V +ST L+ +Y + A
Sbjct: 111 DNVALAVVLAACHGAGSCTARRSPGRMVHAFIVACGIEPDVFVSTELIRVYGERGEMTVA 170
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLS 269
R +FD M ++ ++WN M++ + + +E A LF +P +DVVSW T+I GY V R
Sbjct: 171 RRVFDSMPTKSTIAWNTMVHQYVRNKDIEAAYRLFLAMPRRDVVSWNTVIAGYCLVGRCK 230
Query: 270 EALTMYRAMLCDG---IAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQA 326
EAL ++R M+ + PN + ++SAC A G+ +H I K + +
Sbjct: 231 EALGLFRQMVSPSSCTVHPNGPTMSTVLSACAGAGCLETGIWVHLYIDKNQMNDNGTLDR 290
Query: 327 TIIHFYAACGRINLARLQFELGI-KDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVY 385
+I YA CG I+ A FE K + SW +I G +G D ++F+ MQ
Sbjct: 291 CLIDMYAKCGSIDKALQVFEKAPGKRDLYSWTTVICGLAMHGRANDVLRMFSMMQ----- 345
Query: 386 SWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYV 445
D+G+ P+++T V V A A G + EG H Y
Sbjct: 346 --------------------------DSGMCPDDVTFVGVLNACAHGGLVDEG-LHHFYS 378
Query: 446 LNNSITLNDNLS--AAIIDMYAKCGSINTAFEVFYHIRDRTTSVSP----WNAIICGLAM 499
+ + + +ID+ + G + A+ + +T + P W A + +
Sbjct: 379 MQEKYRITPKIEHYGCMIDLLGRVGRLPEAYRMI-----QTMPMKPNMVIWGAFLSACKV 433
Query: 500 HGDANL 505
H L
Sbjct: 434 HSSVEL 439
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 88/217 (40%), Gaps = 34/217 (15%)
Query: 26 LVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCS 85
+ + L C+ + G +H I K+ + N + LI++YAKCG I
Sbjct: 254 MSTVLSACAGAGCLETGIWVHLYIDKNQMNDNGTLDRCLIDMYAKCGSI----------- 302
Query: 86 TLDPVACNIMISGYIRNDRLNDAREVFDKTPIKC-CVSYTSMIMGFAQNDCWREALEVFR 144
+ A +VF+K P K S+T++I G A + + L +F
Sbjct: 303 --------------------DKALQVFEKAPGKRDLYSWTTVICGLAMHGRANDVLRMFS 342
Query: 145 DMRILGVIPNEVTLASVISSSVHLGGIWE-CRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
M+ G+ P++VT V+++ H G + E + + K I + ++++
Sbjct: 343 MMQDSGMCPDDVTFVGVLNACAHGGLVDEGLHHFYSMQEKYRITPKIEHYGCMIDLLGRV 402
Query: 204 SSLVEARSLFDEMKER-NIVSWNVMLNGFAKAGLVEL 239
L EA + M + N+V W L+ VEL
Sbjct: 403 GRLPEAYRMIQTMPMKPNMVIWGAFLSACKVHSSVEL 439
>gi|449530632|ref|XP_004172298.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 187/616 (30%), Positives = 300/616 (48%), Gaps = 75/616 (12%)
Query: 47 SLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTL----DPVACNIMISGYIRN 102
S +F LE ++ N L +Q K + L D N+++ +
Sbjct: 9 SPVFSKALEIKNYLSNGL-------NFFNQLKHIHARLLRLHLDQDNYLLNLILCCALDF 61
Query: 103 DRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVI 162
N ++ VF + + +MI G DC+ +A+ ++ MR G +PN T+ V+
Sbjct: 62 GSTNYSKLVFSQVKEPNIFLWNTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVL 121
Query: 163 SSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIV 222
+ + +H L++K D V + T+LL++Y C + +A +FD+
Sbjct: 122 KACARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDD------- 174
Query: 223 SWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDG 282
IP K+VVSW +I GY+ EA+ ++ +L G
Sbjct: 175 ------------------------IPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMG 210
Query: 283 IAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLAR 342
+ P+ +V +++AC R G I I +G F+ +++ Y CG +
Sbjct: 211 LKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNL---- 266
Query: 343 LQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNM 402
E A +F+ M ++D+ SWS MI GYA N P
Sbjct: 267 ---------------------------ERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQ 299
Query: 403 ALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIID 462
AL+LF M +KP+ TMV V A A+ G L G WA + N N L A+ID
Sbjct: 300 ALDLFFQMQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTALID 359
Query: 463 MYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNS 522
MY+KCGS+ A+E+F ++ + V WNA++ GL+M+G A ++S +EK I+ +
Sbjct: 360 MYSKCGSVTQAWEIFTAMKKKDRVV--WNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDE 417
Query: 523 ITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIR 582
TFIG+L C H G V+ G ++F +MK V+++ P ++HYGCMVDLLGRAG L +A ++I
Sbjct: 418 NTFIGLLCGCTHGGFVNEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLIN 477
Query: 583 SMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWED 642
+MPMK + V+WG LL ++H + + E+ K L L+P + + V LSNIY+ RWE+
Sbjct: 478 NMPMKPNAVVWGALLGGCKLHKDTHLAEQVLKKLIELEPWNSGNYVQLSNIYSGNHRWEE 537
Query: 643 AFSIRKEMRDCGMKRL 658
A IR M++ ++++
Sbjct: 538 AEKIRSTMKEQQIQKI 553
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 110/489 (22%), Positives = 203/489 (41%), Gaps = 103/489 (21%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
L+ C+ + V G +IHSL+ K+G + + F++ SL++LY KC A +FD +
Sbjct: 121 LKACARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNV 180
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
V+ +I+GYI + +REA+ F+ + +
Sbjct: 181 VSWTAIITGYISSGH-------------------------------FREAIGAFKKLLEM 209
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
G+ P+ +L V+++ LG + + + V ++T+LL+MY C +L A
Sbjct: 210 GLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERA 269
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLS 269
+F M E++IVSW+ M+ G+A GL + A +LF ++ S++
Sbjct: 270 NLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSEN------------------ 311
Query: 270 EALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATII 329
+ P+ +V ++SAC A G+ S++ + F + +I
Sbjct: 312 -------------LKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTALI 358
Query: 330 HFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSA 389
Y+ CG + A F K WNA++ G NG + LF+ ++K
Sbjct: 359 DMYSKCGSVTQAWEIFTAMKKKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKH------- 411
Query: 390 MISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNN- 448
G++P+E T + + C G + EGR NN
Sbjct: 412 ------------------------GIRPDENTFIGLLCGCTHGGFVNEGR----QFFNNM 443
Query: 449 ----SITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDAN 504
S+T + ++D+ + G +N A ++ ++ + +V W A++ G +H D +
Sbjct: 444 KRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVV-WGALLGGCKLHKDTH 502
Query: 505 LTLKIYSDL 513
L ++ L
Sbjct: 503 LAEQVLKKL 511
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 83/397 (20%), Positives = 153/397 (38%), Gaps = 107/397 (26%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+LV L C+ + G+ I I SG+ N F+ SL+++Y KCG + +A +F +
Sbjct: 216 FSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERANLIFSA 275
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
D V+ + MI GY F+ P ++AL++F
Sbjct: 276 MPEKDIVSWSTMIQGY-----------AFNGLP--------------------QQALDLF 304
Query: 144 RDMRILGVIPNEVTLASVISSSVHLG----GIWECRMLHGLVIKLMIDGFV---IISTNL 196
M+ + P+ T+ V+S+ LG GIW ++ + F+ ++ T L
Sbjct: 305 FQMQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDR-------NEFLSNPVLGTAL 357
Query: 197 LNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWG 256
++MY C S+ +A +F MK+++ V WN M+ G + G + LF +
Sbjct: 358 IDMYSKCGSVTQAWEIFTAMKKKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKH------ 411
Query: 257 TMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKA 316
GI P++ + L+ C EG Q +
Sbjct: 412 -------------------------GIRPDENTFIGLLCGCTHGGFVNEGRQFFN----- 441
Query: 317 GFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLF 376
N+ R+ + I + ++ R G++ +A QL
Sbjct: 442 ----------------------NMKRV---FSLTPSIEHYGCMVDLLGRAGLLNEAHQLI 476
Query: 377 NNMQ-KRDVYSWSAMISGYAQNEQPNMALELFHGMVD 412
NNM K + W A++ G ++ ++A ++ +++
Sbjct: 477 NNMPMKPNAVVWGALLGGCKLHKDTHLAEQVLKKLIE 513
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 97/258 (37%), Gaps = 74/258 (28%)
Query: 10 FNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYA 69
F Q NL+ Y +V L C+ A+ G SL+ ++ SN + +LI++Y+
Sbjct: 305 FQMQSENLKPDCY--TMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYS 362
Query: 70 KCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMG 129
KCG ++QA +F + D V N +M++G
Sbjct: 363 KCGSVTQAWEIFTAMKKKDRVVWN-------------------------------AMMVG 391
Query: 130 FAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGF 189
+ N + +F + G+ P+E T ++ C HG GF
Sbjct: 392 LSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLL-----------CGCTHG--------GF 432
Query: 190 VIISTNLLNMYCVCSSLVEARSLFDEMKE-----RNIVSWNVMLNGFAKAGLVELARELF 244
V E R F+ MK +I + M++ +AGL+ A +L
Sbjct: 433 V----------------NEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLI 476
Query: 245 ERIPSK-DVVSWGTMIDG 261
+P K + V WG ++ G
Sbjct: 477 NNMPMKPNAVVWGALLGG 494
>gi|225464281|ref|XP_002271266.1| PREDICTED: pentatricopeptide repeat-containing protein At3g16610
[Vitis vinifera]
Length = 785
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 208/662 (31%), Positives = 330/662 (49%), Gaps = 103/662 (15%)
Query: 3 LDHFHSVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQN 62
+D +HS+ + ++ + Y V L+ CS +A+ G +IHS GLES+ F+
Sbjct: 94 IDLYHSMLH---LGVRPNKYTYPFV--LKACSGLLAIEDGVEIHSHAKMFGLESDVFVCT 148
Query: 63 SLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVS 122
+L++ YAKCG++ +A+ +F S S D VA N MI+G C
Sbjct: 149 ALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAG---------------------CSL 187
Query: 123 YTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVI 182
Y G +A+++ M+ G+ PN T+ V+ + + + LHG +
Sbjct: 188 Y-----GLCD-----DAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCV 237
Query: 183 KLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARE 242
+ D V++ T LL+MY C L+ AR+
Sbjct: 238 RRSFDNGVVVGTGLLDMYAKCQCLL-------------------------------YARK 266
Query: 243 LFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAM-LCDGIAPNDVMIVDLISACGRAM 301
+F+ + ++ VSW MI GY+ + + EAL ++ M L D + P V + ++ AC +
Sbjct: 267 IFDVMGVRNEVSWSAMIGGYVASDCMKEALELFDQMILKDAMDPTPVTLGSVLRACAKLT 326
Query: 302 AFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLA-RLQFELGIKDHIASWNALI 360
G ++H I+K G + T++ YA CG I+ A R E+ KD + S++A++
Sbjct: 327 DLSRGRKLHCYIIKLGSVLDILLGNTLLSMYAKCGVIDDAIRFFDEMNPKDSV-SFSAIV 385
Query: 361 AGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEI 420
+G ++NG +AL +F M +G+ P+
Sbjct: 386 SGCVQNG-------------------------------NAAVALSIFRMMQLSGIDPDLT 414
Query: 421 TMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHI 480
TM+ V A + L+ G +H Y++ + + A+IDMY+KCG I+ A EVF +
Sbjct: 415 TMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRM 474
Query: 481 RDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDL 540
DR VS WNA+I G +HG L ++ DL +K + ITFI +LS+C H+GLV
Sbjct: 475 -DRHDIVS-WNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVME 532
Query: 541 GERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAAS 600
G +F +M +++ P ++H CMVD+LGRAG +++A IR+MP + DV IW LL+A
Sbjct: 533 GRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSAC 592
Query: 601 RIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPG 660
RIH N+E+GE +K + L P + VLLSNIY+ AGRW+DA IR +D G+K++PG
Sbjct: 593 RIHKNIELGEEVSKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKIPG 652
Query: 661 FS 662
S
Sbjct: 653 CS 654
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 155/615 (25%), Positives = 266/615 (43%), Gaps = 89/615 (14%)
Query: 60 IQNSLINLYAKC---GLISQAKSM----FDSCSTLDPVACNIMISGYIRNDRLNDAREVF 112
++N+ ++L C +++AK + + S D + + Y+ +++ AR +F
Sbjct: 7 VKNNYLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLF 66
Query: 113 DKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIW 172
D+ P + + +I +A N + A++++ M LGV PN+ T V+ + L I
Sbjct: 67 DEIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIE 126
Query: 173 ECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFA 232
+ +H ++ V + T L++ Y C LVEA+ LF M R++V+WN M+ G +
Sbjct: 127 DGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCS 186
Query: 233 KAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVD 292
GL + +A+ + M +GI PN IV
Sbjct: 187 LYGLCD-------------------------------DAVQLIMQMQEEGICPNSSTIVG 215
Query: 293 LISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFE-LGIKD 351
++ G A A G G +H V+ FD + ++ YA C + AR F+ +G+++
Sbjct: 216 VLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRN 275
Query: 352 HIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMV 411
+ SW+A+I G++ + +++A +LF+ M +D
Sbjct: 276 EV-SWSAMIGGYVASDCMKEALELFDQMILKD---------------------------- 306
Query: 412 DAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSIN 471
+ P +T+ SV A A L GR H Y++ L+ L ++ MYAKCG I+
Sbjct: 307 --AMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGSVLDILLGNTLLSMYAKCGVID 364
Query: 472 TAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLST 531
A F + + SVS ++AI+ G +G+A + L I+ ++ I + T +GVL
Sbjct: 365 DAIRFFDEMNPK-DSVS-FSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPA 422
Query: 532 CCHAGLVDLGERYFKSMKS--VYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKAD 589
C H + G F S V D ++D+ + G++ A EV M + D
Sbjct: 423 CSHLAALQHG---FCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMD-RHD 478
Query: 590 VVIWGTLLAASRIHG-NVEVGERAAKSLA-GLQPSHGPSRVLLSN-----IYADAGRWED 642
+V W ++ IHG +E LA GL+P LLS+ + + W D
Sbjct: 479 IVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFD 538
Query: 643 A----FSIRKEMRDC 653
A FSI M C
Sbjct: 539 AMSRDFSIVPRMEHC 553
>gi|449442683|ref|XP_004139110.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
gi|449516005|ref|XP_004165038.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 609
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 157/430 (36%), Positives = 249/430 (57%), Gaps = 2/430 (0%)
Query: 237 VELARELFERIPSKDVVSWGTMIDGY-LQVERLSEALTMYRAMLCDG-IAPNDVMIVDLI 294
+ A +F+ P D+ + T+I +++ T +R+++ + + PN
Sbjct: 50 ISYAHMVFDHFPQPDLFLYNTIIKVLAFSTTSSADSFTKFRSLIREERLVPNQYSFAFAF 109
Query: 295 SACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIA 354
CG + EG Q+ +K G + F+ +I Y + AR F+ +
Sbjct: 110 KGCGSGVGVLEGEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMY 169
Query: 355 SWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAG 414
SWN +++G+ R G +++ARQLF+ M ++DV SW+ MISG Q AL++FH M+ G
Sbjct: 170 SWNIMLSGYARLGKMDEARQLFDEMPEKDVVSWTTMISGCLQVGYFMEALDIFHNMLAKG 229
Query: 415 VKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAF 474
+ PNE T+ S A A+ L +GRW H Y+ N+I +N+ L A +IDMYAKCG + A
Sbjct: 230 MSPNEYTLASSLAACANLVALDQGRWMHVYIKKNNIQMNERLLAGLIDMYAKCGELEFAS 289
Query: 475 EVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCH 534
++F V PWNA+I G A+HG + ++++ ++ + N +TF+ +L+ C H
Sbjct: 290 KLFNSNPRLKRKVWPWNAMIGGFAVHGKSKEAIEVFEQMKIEKVSPNKVTFVALLNACSH 349
Query: 535 AGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWG 594
V+ G YF+SM S Y V+P+L+HYGC+VDLLGRAG+L++AEE+I SM + DV IWG
Sbjct: 350 GNRVEEGRYYFESMASHYRVKPELEHYGCLVDLLGRAGRLKEAEEIISSMHLTPDVAIWG 409
Query: 595 TLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCG 654
LL+A +IH + E+GER K + L P+H VLL+NIY+ G W +A ++R+++ + G
Sbjct: 410 ALLSACKIHKDAEMGERVGKIVKELDPNHLGCHVLLANIYSLTGNWNEARTLREKIAESG 469
Query: 655 MKRLPGFSGV 664
K+ PG S +
Sbjct: 470 KKKTPGCSSI 479
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 110/410 (26%), Positives = 193/410 (47%), Gaps = 43/410 (10%)
Query: 108 AREVFDKTPIKCCVSYTSMI--MGFAQN---DCWREALEVFRDMRILGVIPNEVTLASVI 162
A VFD P Y ++I + F+ D + + + R+ R+ +PN+ + A
Sbjct: 53 AHMVFDHFPQPDLFLYNTIIKVLAFSTTSSADSFTKFRSLIREERL---VPNQYSFAFAF 109
Query: 163 SSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIV 222
G+ E + IKL ++ + ++ L+ MY +V+AR +FD R++
Sbjct: 110 KGCGSGVGVLEGEQVRVHAIKLGLENNLFVTNALIGMYVNLDFVVDARKVFDWSPNRDMY 169
Query: 223 SWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDG 282
SWN+ML+G+A+ G ++ AR+LF+ +P KDVVSW TMI G LQV EAL ++ ML G
Sbjct: 170 SWNIMLSGYARLGKMDEARQLFDEMPEKDVVSWTTMISGCLQVGYFMEALDIFHNMLAKG 229
Query: 283 IAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLAR 342
++PN+ + ++AC +A +G +H I K + + A +I YA CG + A
Sbjct: 230 MSPNEYTLASSLAACANLVALDQGRWMHVYIKKNNIQMNERLLAGLIDMYAKCGELEFAS 289
Query: 343 LQFELG--IKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQP 400
F +K + WNA+I GF +G ++
Sbjct: 290 KLFNSNPRLKRKVWPWNAMIGGFAVHGKSKE----------------------------- 320
Query: 401 NMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNN-SITLNDNLSAA 459
A+E+F M V PN++T V++ A + ++EGR+ E + ++ +
Sbjct: 321 --AIEVFEQMKIEKVSPNKVTFVALLNACSHGNRVEEGRYYFESMASHYRVKPELEHYGC 378
Query: 460 IIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKI 509
++D+ + G + A E+ + T V+ W A++ +H DA + ++
Sbjct: 379 LVDLLGRAGRLKEAEEIISSMH-LTPDVAIWGALLSACKIHKDAEMGERV 427
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 115/444 (25%), Positives = 199/444 (44%), Gaps = 71/444 (15%)
Query: 6 FHSVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLI 65
F S+ ++ L + Y A A + C + + V +G+Q+ K GLE+N F+ N+LI
Sbjct: 89 FRSLIREER--LVPNQYSFAF--AFKGCGSGVGVLEGEQVRVHAIKLGLENNLFVTNALI 144
Query: 66 NLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTS 125
+Y + A+ +FD D + NIM+SGY R ++++AR++FD+ P K VS+T+
Sbjct: 145 GMYVNLDFVVDARKVFDWSPNRDMYSWNIMLSGYARLGKMDEARQLFDEMPEKDVVSWTT 204
Query: 126 MIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLM 185
MI G Q + EAL++F +M G+ PNE TLAS +++ +L + + R +H + K
Sbjct: 205 MISGCLQVGYFMEALDIFHNMLAKGMSPNEYTLASSLAACANLVALDQGRWMHVYIKKNN 264
Query: 186 IDGFVIISTNLLNMYCVCSSLVEARSLFDEMK--ERNIVSWNVMLNGFAKAGLVELAREL 243
I + L++MY C L A LF+ +R + WN M+ GFA G + A E+
Sbjct: 265 IQMNERLLAGLIDMYAKCGELEFASKLFNSNPRLKRKVWPWNAMIGGFAVHGKSKEAIEV 324
Query: 244 FERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAF 303
FE+ +++E++S PN V V L++AC
Sbjct: 325 FEQ----------------MKIEKVS---------------PNKVTFVALLNACSHGNRV 353
Query: 304 GEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGF 363
EG + ++ H+ +K + + L+
Sbjct: 354 EEGRY--------------YFESMASHYR----------------VKPELEHYGCLVDLL 383
Query: 364 IRNGMIEDARQLFNNMQ-KRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITM 422
R G +++A ++ ++M DV W A++S ++ M + G + + PN +
Sbjct: 384 GRAGRLKEAEEIISSMHLTPDVAIWGALLSACKIHKDAEMGERV--GKIVKELDPNHLGC 441
Query: 423 VSVFCAIAS-SGTLKEGRWAHEYV 445
+ I S +G E R E +
Sbjct: 442 HVLLANIYSLTGNWNEARTLREKI 465
>gi|413925246|gb|AFW65178.1| hypothetical protein ZEAMMB73_703358 [Zea mays]
Length = 572
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 194/558 (34%), Positives = 291/558 (52%), Gaps = 51/558 (9%)
Query: 112 FDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGI 171
F P + +I A + R + F + G +P+ T + S+
Sbjct: 49 FPLFPSSATFLHNLLIRASAASPSPRLSFAAFSSLLRSGHLPDHFTFPPLAKSASKFPSF 108
Query: 172 WEC-RMLHGLVIK--LMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKER-NIVSWNVM 227
+H + L+ D F + +LL MY R + + E ++VSWN +
Sbjct: 109 PRTGAQVHAQAARRGLLADAFAV--NSLLAMYAALRDAASMRGVLESCAEAADVVSWNTV 166
Query: 228 LNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPND 287
+ G+A+ G + AR F+ +P ++ SW M+ Y +L A M+
Sbjct: 167 VAGYARCGELGNARRAFDGMPRRNGASWSAMVGAYAAAGQLDVARDMF------------ 214
Query: 288 VMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFEL 347
D A GR++ + +S++ AG A G + LAR F+
Sbjct: 215 ----DRAPAAGRSV-----VTWNSMV--AGL--------------ARHGLLPLARKMFDE 249
Query: 348 GIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELF 407
++ SWNA++ G+ NG ++ AR+LF+ M ++DV SW+ M+SGYA+ + ALELF
Sbjct: 250 MPARNLVSWNAMVRGYAVNGDVDGARELFDAMPEKDVVSWTCMVSGYARAGRHAQALELF 309
Query: 408 HGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLND--NLSAAIIDMYA 465
M V+PNE+TMVSVF A A LKEGRWAH ++ + L+D NL AA+IDMYA
Sbjct: 310 RTMQSGDVRPNEVTMVSVFSACARLAALKEGRWAHAFIGKRGMVLDDGFNLGAALIDMYA 369
Query: 466 KCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITF 525
KCG + A +VF + DR +VS WNA+I GLA +GDA + ++ ++ + K +S+TF
Sbjct: 370 KCGRPDVAAKVFRSL-DRK-NVSAWNALIAGLAANGDARRCIDVFEQMKVSDEKPDSVTF 427
Query: 526 IGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMP 585
+ VL+ C AGLVD G R F+SM S + V+P+LKHYGCMVDLLGRAG +++AEE++R MP
Sbjct: 428 VSVLAACARAGLVDEGRRCFRSMSSGFGVQPELKHYGCMVDLLGRAGLVDEAEELVRGMP 487
Query: 586 MKADVVIWGTLLAASRIHGNVEVGERAAKSLAGL---QPSHGPSRVLLSNIYADAGRWED 642
M D + TLL A R+ +V ER + + L QPS S ++S++ A A RW
Sbjct: 488 MAPDDKVLATLLGACRVRRRPDVAERVRRRIQSLNTKQPSR-ESYFMISDVRATADRWAV 546
Query: 643 AFSIRKEMRDCGMKRLPG 660
A + M + +L G
Sbjct: 547 ALKAKGFMHKYNIMKLDG 564
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 134/443 (30%), Positives = 211/443 (47%), Gaps = 80/443 (18%)
Query: 42 GQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCS-TLDPVACNIMISGYI 100
G Q+H+ + GL ++ F NSL+ +YA + + + +SC+ D V+ N +++GY
Sbjct: 112 GAQVHAQAARRGLLADAFAVNSLLAMYAALRDAASMRGVLESCAEAADVVSWNTVVAGYA 171
Query: 101 RNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDM--RILGVIPNEVTL 158
R L +AR FD P + S+++M+ +A L+V RDM R + VT
Sbjct: 172 RCGELGNARRAFDGMPRRNGASWSAMVGAYAAAG----QLDVARDMFDRAPAAGRSVVTW 227
Query: 159 ASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKE 218
S+++ HGL L AR +FDEM
Sbjct: 228 NSMVAGLAR----------HGL-------------------------LPLARKMFDEMPA 252
Query: 219 RNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAM 278
RN+VSWN M+ G+A G V+ ARELF+ +P KDVVSW M+ GY + R ++AL ++R M
Sbjct: 253 RNLVSWNAMVRGYAVNGDVDGARELFDAMPEKDVVSWTCMVSGYARAGRHAQALELFRTM 312
Query: 279 LCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGF---DCYDFIQATIIHFYAAC 335
+ PN+V +V + SAC R A EG H+ I K G D ++ + A +I YA C
Sbjct: 313 QSGDVRPNEVTMVSVFSACARLAALKEGRWAHAFIGKRGMVLDDGFN-LGAALIDMYAKC 371
Query: 336 GRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYA 395
GR ++A F + ++++WNALIAG NG DAR+
Sbjct: 372 GRPDVAAKVFRSLDRKNVSAWNALIAGLAANG---DARRC-------------------- 408
Query: 396 QNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDN 455
+++F M + KP+ +T VSV A A +G + EGR +++ +
Sbjct: 409 --------IDVFEQMKVSDEKPDSVTFVSVLAACARAGLVDEGRRCFRS-MSSGFGVQPE 459
Query: 456 LS--AAIIDMYAKCGSINTAFEV 476
L ++D+ + G ++ A E+
Sbjct: 460 LKHYGCMVDLLGRAGLVDEAEEL 482
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 131/279 (46%), Gaps = 47/279 (16%)
Query: 62 NSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCV 121
NS++ A+ GL+ A+ MFD + V+ N M+ GY N ++ ARE+FD P K V
Sbjct: 228 NSMVAGLARHGLLPLARKMFDEMPARNLVSWNAMVRGYAVNGDVDGARELFDAMPEKDVV 287
Query: 122 SYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLV 181
S+T M+ G+A+ +ALE+FR M+ V PNEVT+ SV S+ L + E R H +
Sbjct: 288 SWTCMVSGYARAGRHAQALELFRTMQSGDVRPNEVTMVSVFSACARLAALKEGRWAHAFI 347
Query: 182 IK---LMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGF------- 231
K ++ DGF + L++MY C A +F + +N+ +WN ++ G
Sbjct: 348 GKRGMVLDDGF-NLGAALIDMYAKCGRPDVAAKVFRSLDRKNVSAWNALIAGLAANGDAR 406
Query: 232 ----------------------------AKAGLVELARELFERIPS-----KDVVSWGTM 258
A+AGLV+ R F + S ++ +G M
Sbjct: 407 RCIDVFEQMKVSDEKPDSVTFVSVLAACARAGLVDEGRRCFRSMSSGFGVQPELKHYGCM 466
Query: 259 IDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISAC 297
+D + + EA + R M +AP+D ++ L+ AC
Sbjct: 467 VDLLGRAGLVDEAEELVRGM---PMAPDDKVLATLLGAC 502
>gi|147843467|emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera]
Length = 1005
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 195/644 (30%), Positives = 317/644 (49%), Gaps = 98/644 (15%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
+++ VSA + I + +G++IH + ++S+ + L+ +YAKCG +AK +F
Sbjct: 329 KVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFW 388
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
D VA ++++I Q EAL +
Sbjct: 389 GLQGRDLVA-------------------------------WSAIIAALVQTGYPEEALSL 417
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
F++M+ + PN VTL S++ + L + + +H +K +D + T L++MY
Sbjct: 418 FQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAK 477
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
C A + F+ M R+IV+WN ++NG+A+ G D Y
Sbjct: 478 CGFFTAALTTFNRMSSRDIVTWNSLINGYAQIG------------------------DPY 513
Query: 263 LQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD 322
A+ M+ + I P+ +V ++ AC +G IH +IVK GF+
Sbjct: 514 -------NAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDC 566
Query: 323 FIQATIIHFYAACGRINLARLQFELG--IKDHIASWNALIAGFIRNGMIEDARQLFNNMQ 380
++ +I YA CG + A F KD + +WN +IA +++NG ++A
Sbjct: 567 HVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEV-TWNVIIAAYMQNGHAKEA-------- 617
Query: 381 KRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRW 440
IS + Q M LE FH PN +T VSV A A +EG
Sbjct: 618 ----------ISSFHQ-----MRLENFH--------PNSVTFVSVLPAAAYLAAFREGMA 654
Query: 441 AHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMH 500
H ++ N + ++IDMYAKCG + + ++F + D +VS WNA++ G A+H
Sbjct: 655 FHACIIQMGFLSNTLVGNSLIDMYAKCGQLXYSEKLFNEM-DHKDTVS-WNAMLSGYAVH 712
Query: 501 GDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKH 560
G + + ++S +++ ++++S++F+ VLS C H GLV+ G + F SM Y+++PDL+H
Sbjct: 713 GHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHXGLVEEGRKIFHSMSDKYHIKPDLEH 772
Query: 561 YGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQ 620
Y CMVDLLGRAG ++ I+ MP++ D +WG LL + R+H NV++GE A L L+
Sbjct: 773 YACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLE 832
Query: 621 PSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
P + V+LS+IYA +GRW DA R +M D G+K+ PG S V
Sbjct: 833 PRNPAHFVVLSSIYAQSGRWADAGKARSKMNDLGLKKTPGCSWV 876
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 153/605 (25%), Positives = 249/605 (41%), Gaps = 122/605 (20%)
Query: 14 KANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGL 73
+ L+ Y V L+ C+ + + +G H I + GLE + FI L+++Y+K G
Sbjct: 122 EKGLEPDKYTFTFV--LKACTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMG- 178
Query: 74 ISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQN 133
L AREVFDK P + V++ +MI G +Q+
Sbjct: 179 ------------------------------DLKRAREVFDKMPKRDVVAWNAMIAGLSQS 208
Query: 134 DCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIIS 193
+ EA++ FR M+++GV P+ V+L ++ L I CR +HG V + D +S
Sbjct: 209 EDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRR--DFSSAVS 266
Query: 194 TNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVV 253
L+++Y C G V++AR +F+++ +D V
Sbjct: 267 NGLIDLYSKC-------------------------------GDVDVARRVFDQMVDQDDV 295
Query: 254 SWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSII 313
SWGTM+ GY E L ++ M + N V V A + +G +IH
Sbjct: 296 SWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCA 355
Query: 314 VKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDAR 373
++ D + ++ YA CG E A+
Sbjct: 356 LQQRIDSDILVATPLMVMYAKCGET-------------------------------EKAK 384
Query: 374 QLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSG 433
QLF +Q RD+ +WSA+I+ Q P AL LF M + +KPN +T++S+ A A
Sbjct: 385 QLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLS 444
Query: 434 TLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAI 493
LK G+ H + + + + + A++ MYAKCG A F + R + WN++
Sbjct: 445 LLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSR--DIVTWNSL 502
Query: 494 ICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLS-----------TCCHAGLVDLGE 542
I G A GD + ++ L I ++ T +GV+ TC H +V LG
Sbjct: 503 INGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLG- 561
Query: 543 RYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRI 602
E D ++D+ + G L AE + D V W ++AA
Sbjct: 562 -----------FESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQ 610
Query: 603 HGNVE 607
+G+ +
Sbjct: 611 NGHAK 615
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 134/567 (23%), Positives = 235/567 (41%), Gaps = 105/567 (18%)
Query: 44 QIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRND 103
QIH+ I SG + + I + LINLY S+F C
Sbjct: 50 QIHAQIIVSGFKHHHSITH-LINLY----------SLFHKCDL----------------- 81
Query: 104 RLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVIS 163
AR VFD TP + + SMI + ++ + EALE++ M G+ P++ T V+
Sbjct: 82 ----ARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLK 137
Query: 164 SSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVS 223
+ + E HG + + ++ V I L++MY L AR +FD+M +R++V+
Sbjct: 138 ACTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVA 197
Query: 224 WNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGI 283
WN M+ G + Q E EA+ +R+M G+
Sbjct: 198 WNAMIAGLS-------------------------------QSEDPCEAVDFFRSMQLVGV 226
Query: 284 APNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARL 343
P+ V +++L + IH + + F + +I Y+ CG +++AR
Sbjct: 227 EPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFS--SAVSNGLIDLYSKCGDVDVARR 284
Query: 344 QFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMA 403
F+ + SW ++AG+ NG +
Sbjct: 285 VFDQMVDQDDVSWGTMMAGYAHNGCFVE-------------------------------V 313
Query: 404 LELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDM 463
LELF M V+ N+++ VS F A A + L++G+ H L I + ++ ++ M
Sbjct: 314 LELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVM 373
Query: 464 YAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSI 523
YAKCG A ++F+ ++ R + W+AII L G L ++ +++ + +K N +
Sbjct: 374 YAKCGETEKAKQLFWGLQGR--DLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRV 431
Query: 524 TFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRS 583
T + +L C L+ LG + +++ DL +V + + G A
Sbjct: 432 TLMSILPACADLSLLKLG-KSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNR 490
Query: 584 MPMKADVVIWGTLLAASRIHGNVEVGE 610
M + D+V W +L I+G ++G+
Sbjct: 491 MSSR-DIVTWNSL-----INGYAQIGD 511
>gi|255574235|ref|XP_002528032.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532562|gb|EEF34350.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 730
Score = 313 bits (803), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 189/631 (29%), Positives = 318/631 (50%), Gaps = 75/631 (11%)
Query: 38 AVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMIS 97
++SQG+Q+H+LI G E + I L+ Y L++ A ++ ++ + L P+ N++IS
Sbjct: 108 SLSQGKQLHTLIISLGFEQHPIIVPKLVTFYTNFDLLADAHTITENSNILHPLPWNLLIS 167
Query: 98 GYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVT 157
Y+R N EAL ++ M G+ P++ T
Sbjct: 168 SYVR-------------------------------NGLHGEALSAYKQMTHKGIRPDKFT 196
Query: 158 LASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMK 217
SV+ + I + LH + + + + +L++MY L AR LF+ M
Sbjct: 197 YPSVLKACGEKLDIAFGKKLHASINASCLGWNLFVHNSLVSMYAKTGELSTARCLFENML 256
Query: 218 ERNIVSWNVMLNGFAKAGLVELARELFERIPSK----DVVSWGTMIDGYLQVERLSEALT 273
ER+ VSWN M++G+A G+ + A ELF ++ + ++++W T+ G +Q EAL
Sbjct: 257 ERDDVSWNTMISGYASKGMWKEAFELFGKMRVEGIELNIITWNTIAGGCVQSGNFEEALE 316
Query: 274 MYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYA 333
+ M GI + V + + AC A G +IH +++ +D D ++ +I Y+
Sbjct: 317 LLSHMRSYGIDMDSVATIIGLGACSHIGAIKLGREIHGSAIRSFYDGVDNVKNALITMYS 376
Query: 334 ACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISG 393
C ++R+ A LF + + +++ +W++M+SG
Sbjct: 377 RCK--------------------------YLRH-----AYNLFQSTRTKNIITWNSMLSG 405
Query: 394 YAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLN 453
Y ++ A LF M+ +G++PN +T+ S+ A L+ G+ H Y+L +
Sbjct: 406 YTHMDRSEEASFLFREMLLSGIEPNYVTIASILPLCARVANLQHGKEFHCYILRRA-GFK 464
Query: 454 DNLSA--AIIDMYAKCGSINTAFEVFYHI--RDRTTSVSPWNAIICGLAMHGDANLTLKI 509
D L +++DMYA+ G + A +F I RD T + ++I G + G+ LK+
Sbjct: 465 DYLLLWNSLVDMYARSGKVLEAKRLFDSISRRDEVT----YTSLIAGYGIQGEGREALKL 520
Query: 510 YSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLG 569
+ +++KR+IK + +T + VLS C H+GLV G + F+ M S Y + P L+H+ CMVDL G
Sbjct: 521 FDEMKKRHIKPDHVTMVAVLSACSHSGLVTEGIKLFELMPSAYGIIPRLEHFACMVDLFG 580
Query: 570 RAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVL 629
RAG L A+E+I MP + +W TLL A RIHGN E+GE AA+ L ++P + VL
Sbjct: 581 RAGLLHKAKEMITRMPYRPSSAMWATLLGACRIHGNAEIGEWAAEKLLEMRPENSGYYVL 640
Query: 630 LSNIYADAGRWEDAFSIRKEMRDCGMKRLPG 660
++N+YA AG W +R MRD G+++ PG
Sbjct: 641 IANMYAAAGCWSKLAKVRTYMRDLGVRKAPG 671
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 128/485 (26%), Positives = 230/485 (47%), Gaps = 71/485 (14%)
Query: 28 SALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTL 87
S L+ C + ++ G+++H+ I S L N F+ NSL+++YAK G +S A+ +F++
Sbjct: 199 SVLKACGEKLDIAFGKKLHASINASCLGWNLFVHNSLVSMYAKTGELSTARCLFENMLER 258
Query: 88 DPVACNIMISGYIRNDRLNDAREVFDKTPIKCC----VSYTSMIMGFAQNDCWREALEVF 143
D V+ N MISGY +A E+F K ++ +++ ++ G Q+ + EALE+
Sbjct: 259 DDVSWNTMISGYASKGMWKEAFELFGKMRVEGIELNIITWNTIAGGCVQSGNFEEALELL 318
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
MR G+ + V + + H+G I R +HG I+ DG + L+ MY C
Sbjct: 319 SHMRSYGIDMDSVATIIGLGACSHIGAIKLGREIHGSAIRSFYDGVDNVKNALITMYSRC 378
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYL 263
L A +LF + +NI++WN ML+ GY
Sbjct: 379 KYLRHAYNLFQSTRTKNIITWNSMLS-------------------------------GYT 407
Query: 264 QVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIV-KAGFDCYD 322
++R EA ++R ML GI PN V I ++ C R G + H I+ +AGF Y
Sbjct: 408 HMDRSEEASFLFREMLLSGIEPNYVTIASILPLCARVANLQHGKEFHCYILRRAGFKDYL 467
Query: 323 FIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKR 382
+ +++ YA G+ + +A++LF+++ +R
Sbjct: 468 LLWNSLVDMYARSGK-------------------------------VLEAKRLFDSISRR 496
Query: 383 DVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAH 442
D +++++I+GY + AL+LF M +KP+ +TMV+V A + SG + EG
Sbjct: 497 DEVTYTSLIAGYGIQGEGREALKLFDEMKKRHIKPDHVTMVAVLSACSHSGLVTEGIKLF 556
Query: 443 EYVLNNSITLNDNLS--AAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMH 500
E ++ ++ + L A ++D++ + G ++ A E+ + R +S + W ++ +H
Sbjct: 557 E-LMPSAYGIIPRLEHFACMVDLFGRAGLLHKAKEMITRMPYRPSS-AMWATLLGACRIH 614
Query: 501 GDANL 505
G+A +
Sbjct: 615 GNAEI 619
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 101/461 (21%), Positives = 201/461 (43%), Gaps = 41/461 (8%)
Query: 167 HLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNV 226
+L + + + LH L+I L + II L+ Y L +A ++ + + + WN+
Sbjct: 105 NLKSLSQGKQLHTLIISLGFEQHPIIVPKLVTFYTNFDLLADAHTITENSNILHPLPWNL 164
Query: 227 MLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPN 286
+++ + + GL EAL+ Y+ M GI P+
Sbjct: 165 LISSYVRNGL-------------------------------HGEALSAYKQMTHKGIRPD 193
Query: 287 DVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFE 346
++ ACG + G ++H+ I + F+ +++ YA G ++ AR FE
Sbjct: 194 KFTYPSVLKACGEKLDIAFGKKLHASINASCLGWNLFVHNSLVSMYAKTGELSTARCLFE 253
Query: 347 LGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ----KRDVYSWSAMISGYAQNEQPNM 402
++ SWN +I+G+ GM ++A +LF M+ + ++ +W+ + G Q+
Sbjct: 254 NMLERDDVSWNTMISGYASKGMWKEAFELFGKMRVEGIELNIITWNTIAGGCVQSGNFEE 313
Query: 403 ALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIID 462
ALEL M G+ + + + A + G +K GR H + + DN+ A+I
Sbjct: 314 ALELLSHMRSYGIDMDSVATIIGLGACSHIGAIKLGREIHGSAIRSFYDGVDNVKNALIT 373
Query: 463 MYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNS 522
MY++C + A+ +F RT ++ WN+++ G + ++ ++ I+ N
Sbjct: 374 MYSRCKYLRHAYNLFQ--STRTKNIITWNSMLSGYTHMDRSEEASFLFREMLLSGIEPNY 431
Query: 523 ITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIR 582
+T +L C + G+ + + + L + +VD+ R+G++ +A+ +
Sbjct: 432 VTIASILPLCARVANLQHGKEFHCYILRRAGFKDYLLLWNSLVDMYARSGKVLEAKRLFD 491
Query: 583 SMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSH 623
S+ + D V + +L+A I G G A K ++ H
Sbjct: 492 SIS-RRDEVTYTSLIAGYGIQGE---GREALKLFDEMKKRH 528
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 91/467 (19%), Positives = 173/467 (37%), Gaps = 128/467 (27%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+A + L CS A+ G++IH +S + ++N+LI +Y++C + A ++F S
Sbjct: 331 VATIIGLGACSHIGAIKLGREIHGSAIRSFYDGVDNVKNALITMYSRCKYLRHAYNLFQS 390
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
T + + N M+SGY DR EA +F
Sbjct: 391 TRTKNIITWNSMLSGYTHMDRS-------------------------------EEASFLF 419
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLM-IDGFVIISTNLLNMYCV 202
R+M + G+ PN VT+AS++ + + + H +++ ++++ +L++MY
Sbjct: 420 REMLLSGIEPNYVTIASILPLCARVANLQHGKEFHCYILRRAGFKDYLLLWNSLVDMYAR 479
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
++EA+ LFD + R+ V++ ++ G+ G +G
Sbjct: 480 SGKVLEAKRLFDSISRRDEVTYTSLIAGYGIQG------------------------EG- 514
Query: 263 LQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD 322
EAL ++ M I P+ V +V ++SAC + EG+++ ++ A
Sbjct: 515 ------REALKLFDEMKKRHIKPDHVTMVAVLSACSHSGLVTEGIKLFELMPSA------ 562
Query: 323 FIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKR 382
GI + + ++ F R G++ A+++ M R
Sbjct: 563 ------------------------YGIIPRLEHFACMVDLFGRAGLLHKAKEMITRMPYR 598
Query: 383 DVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAH 442
P+ ++ A G + G WA
Sbjct: 599 ----------------------------------PSSAMWATLLGACRIHGNAEIGEWAA 624
Query: 443 EYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSP 489
E +L N I +MYA G + +V ++RD +P
Sbjct: 625 EKLLEMRPE-NSGYYVLIANMYAAAGCWSKLAKVRTYMRDLGVRKAP 670
>gi|449440243|ref|XP_004137894.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 313 bits (803), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 187/616 (30%), Positives = 300/616 (48%), Gaps = 75/616 (12%)
Query: 47 SLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTL----DPVACNIMISGYIRN 102
S +F LE ++ N L +Q K + L D N+++ +
Sbjct: 9 SPVFSKALEIKNYLSNGL-------NFFNQLKHIHARLLRLHLDQDNYLLNLILCCALDF 61
Query: 103 DRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVI 162
N ++ VF + + +MI G DC+ +A+ ++ MR G +PN T+ V+
Sbjct: 62 GSTNYSKLVFSQVKEPNIFLWNTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVL 121
Query: 163 SSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIV 222
+ + +H L++K D V + T+LL++Y C + +A +FD+
Sbjct: 122 KACARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDD------- 174
Query: 223 SWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDG 282
IP K+VVSW +I GY+ EA+ ++ +L G
Sbjct: 175 ------------------------IPDKNVVSWTAIITGYISSGHFREAIGAFKKLLEMG 210
Query: 283 IAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLAR 342
+ P+ +V +++AC R G I I +G F+ +++ Y CG +
Sbjct: 211 LKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNL---- 266
Query: 343 LQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNM 402
E A +F+ M ++D+ SWS MI GYA N P
Sbjct: 267 ---------------------------ERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQ 299
Query: 403 ALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIID 462
AL+LF M +KP+ TMV V A A+ G L G WA + N N L A+ID
Sbjct: 300 ALDLFFQMQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTALID 359
Query: 463 MYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNS 522
MY+KCGS+ A+E+F ++ + V WNA++ GL+M+G A ++S +EK I+ +
Sbjct: 360 MYSKCGSVTQAWEIFTAMKRKDRVV--WNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDE 417
Query: 523 ITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIR 582
TFIG+L C H G V+ G ++F +MK V+++ P ++HYGCMVDLLGRAG L +A ++I
Sbjct: 418 NTFIGLLCGCTHGGFVNEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLIN 477
Query: 583 SMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWED 642
+MPMK + V+WG LL ++H + + E+ K L L+P + + V LSNIY+ RWE+
Sbjct: 478 NMPMKPNAVVWGALLGGCKLHKDTHLAEQVLKKLIELEPWNSGNYVQLSNIYSGNHRWEE 537
Query: 643 AFSIRKEMRDCGMKRL 658
A IR M++ ++++
Sbjct: 538 AEKIRSTMKEQQIQKI 553
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 109/489 (22%), Positives = 203/489 (41%), Gaps = 103/489 (21%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
L+ C+ + V G +IHSL+ K+G + + F++ SL++LY KC A +FD +
Sbjct: 121 LKACARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNV 180
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
V+ +I+GYI + +REA+ F+ + +
Sbjct: 181 VSWTAIITGYISSGH-------------------------------FREAIGAFKKLLEM 209
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
G+ P+ +L V+++ LG + + + V ++T+LL+MY C +L A
Sbjct: 210 GLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERA 269
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLS 269
+F M E++IVSW+ M+ G+A GL + A +LF ++ S++
Sbjct: 270 NLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSEN------------------ 311
Query: 270 EALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATII 329
+ P+ +V ++SAC A G+ S++ + F + +I
Sbjct: 312 -------------LKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTALI 358
Query: 330 HFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSA 389
Y+ CG + A F + WNA++ G NG + LF+ ++K
Sbjct: 359 DMYSKCGSVTQAWEIFTAMKRKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKH------- 411
Query: 390 MISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNN- 448
G++P+E T + + C G + EGR NN
Sbjct: 412 ------------------------GIRPDENTFIGLLCGCTHGGFVNEGR----QFFNNM 443
Query: 449 ----SITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDAN 504
S+T + ++D+ + G +N A ++ ++ + +V W A++ G +H D +
Sbjct: 444 KRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVV-WGALLGGCKLHKDTH 502
Query: 505 LTLKIYSDL 513
L ++ L
Sbjct: 503 LAEQVLKKL 511
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 83/397 (20%), Positives = 152/397 (38%), Gaps = 107/397 (26%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+LV L C+ + G+ I I SG+ N F+ SL+++Y KCG + +A +F +
Sbjct: 216 FSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKCGNLERANLIFSA 275
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
D V+ + MI GY F+ P ++AL++F
Sbjct: 276 MPEKDIVSWSTMIQGY-----------AFNGLP--------------------QQALDLF 304
Query: 144 RDMRILGVIPNEVTLASVISSSVHLG----GIWECRMLHGLVIKLMIDGFV---IISTNL 196
M+ + P+ T+ V+S+ LG GIW ++ + F+ ++ T L
Sbjct: 305 FQMQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDR-------NEFLSNPVLGTAL 357
Query: 197 LNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWG 256
++MY C S+ +A +F MK ++ V WN M+ G + G + LF +
Sbjct: 358 IDMYSKCGSVTQAWEIFTAMKRKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKH------ 411
Query: 257 TMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKA 316
GI P++ + L+ C EG Q +
Sbjct: 412 -------------------------GIRPDENTFIGLLCGCTHGGFVNEGRQFFN----- 441
Query: 317 GFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLF 376
N+ R+ + I + ++ R G++ +A QL
Sbjct: 442 ----------------------NMKRV---FSLTPSIEHYGCMVDLLGRAGLLNEAHQLI 476
Query: 377 NNMQ-KRDVYSWSAMISGYAQNEQPNMALELFHGMVD 412
NNM K + W A++ G ++ ++A ++ +++
Sbjct: 477 NNMPMKPNAVVWGALLGGCKLHKDTHLAEQVLKKLIE 513
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 99/258 (38%), Gaps = 74/258 (28%)
Query: 10 FNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYA 69
F Q NL+ Y +V L C+ A+ G SL+ ++ SN + +LI++Y+
Sbjct: 305 FQMQSENLKPDCY--TMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYS 362
Query: 70 KCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMG 129
KCG ++QA +F + R DR V + +M++G
Sbjct: 363 KCGSVTQAWEIFTAMK---------------RKDR----------------VVWNAMMVG 391
Query: 130 FAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGF 189
+ N + +F + G+ P+E T ++ C HG GF
Sbjct: 392 LSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLL-----------CGCTHG--------GF 432
Query: 190 VIISTNLLNMYCVCSSLVEARSLFDEMKE-----RNIVSWNVMLNGFAKAGLVELARELF 244
V E R F+ MK +I + M++ +AGL+ A +L
Sbjct: 433 V----------------NEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLI 476
Query: 245 ERIPSK-DVVSWGTMIDG 261
+P K + V WG ++ G
Sbjct: 477 NNMPMKPNAVVWGALLGG 494
>gi|125527494|gb|EAY75608.1| hypothetical protein OsI_03512 [Oryza sativa Indica Group]
Length = 608
Score = 313 bits (803), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 185/557 (33%), Positives = 295/557 (52%), Gaps = 38/557 (6%)
Query: 108 AREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILG--VIPNEVTLASVISSS 165
AR +FD P ++I ++ +E L+ F + G V P V L V+ S
Sbjct: 38 ARHLFDAVPRPTPALCGTLISALSRLCSHQELLDAFSSLHRRGSDVPPGCVPL--VVKSC 95
Query: 166 VHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWN 225
L + + +H I + G + + T L++ Y + A +FDEM ++ + N
Sbjct: 96 AILAASRQGKQVHCHAIVRGLLGDIFVQTALVDFYAKNGDMDCAVKVFDEMPVKDPIPMN 155
Query: 226 VMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAP 285
++ G++K+G V AR LF+ + + SW +MI Y EAL ++R ML +G P
Sbjct: 156 CLITGYSKSGDVVKARRLFDGMVRRTSASWNSMIACYAHGGEYQEALRLFRRMLSEGARP 215
Query: 286 NDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQF 345
N + I + S C + G S+I + +Q I+H
Sbjct: 216 NAITIATMFSICAKTGDLETGKWARSLIAEQD------LQNMIVH--------------- 254
Query: 346 ELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALE 405
AL+ +++ I++AR+ F+ MQ+RDV +WS MI+GYAQN +P+ +LE
Sbjct: 255 -----------TALMEMYVKCQAIDEARREFDRMQQRDVVAWSTMIAGYAQNGRPHESLE 303
Query: 406 LFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYA 465
LF M KPNE+T+V V A A G+ + G +V + ++ L L +A+IDMY
Sbjct: 304 LFERMKATSCKPNEVTLVGVLSACAQLGSDELGGQIGSHVESQNLPLTSYLGSALIDMYT 363
Query: 466 KCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITF 525
KCG + A VF + + V WN+++ GLA++G A + +Y ++ + +++ N ITF
Sbjct: 364 KCGHVGRARSVFNRMEHKV--VITWNSMMRGLALNGFAQDAITLYKEMTEEDVQPNEITF 421
Query: 526 IGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMP 585
+ +L+ C HAGLVD G +FK MK++++V P ++H C+VDLL ++G+L +A + I M
Sbjct: 422 VALLTACTHAGLVDQGMSFFKEMKTIHHVSPQVEHCACIVDLLCKSGRLREAYKFICDME 481
Query: 586 MKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFS 645
++ + VIW TLL+A R H +VE+ + AA L L+P + VLLSNIYADAG W D
Sbjct: 482 VEPNAVIWSTLLSACRAHADVELAKLAASKLLVLEPDNSSIYVLLSNIYADAGLWGDVRE 541
Query: 646 IRKEMRDCGMKRLPGFS 662
IR MR +++L +S
Sbjct: 542 IRDLMRSKNVQKLSAYS 558
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 123/477 (25%), Positives = 214/477 (44%), Gaps = 65/477 (13%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
++ C+ A QG+Q+H GL + F+Q +L++ YAK G + A +FD DP
Sbjct: 92 VKSCAILAASRQGKQVHCHAIVRGLLGDIFVQTALVDFYAKNGDMDCAVKVFDEMPVKDP 151
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
+ N +I+GY ++ + AR +FD + S+ SMI +A ++EAL +FR M
Sbjct: 152 IPMNCLITGYSKSGDVVKARRLFDGMVRRTSASWNSMIACYAHGGEYQEALRLFRRMLSE 211
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
G PN +T+A++ S G + + L+ + + +I+ T L+ MY C ++ EA
Sbjct: 212 GARPNAITIATMFSICAKTGDLETGKWARSLIAEQDLQN-MIVHTALMEMYVKCQAIDEA 270
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLS 269
R FD M++R++V+W+ M+ G+A+ G + ELFER+
Sbjct: 271 RREFDRMQQRDVVAWSTMIAGYAQNGRPHESLELFERM---------------------- 308
Query: 270 EALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATII 329
+A C PN+V +V ++SAC + + G QI S + ++ + +I
Sbjct: 309 ------KATSCK---PNEVTLVGVLSACAQLGSDELGGQIGSHVESQNLPLTSYLGSALI 359
Query: 330 HFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSA 389
Y CG + AR F + +WN+++ G NG +DA L+ M + D
Sbjct: 360 DMYTKCGHVGRARSVFNRMEHKVVITWNSMMRGLALNGFAQDAITLYKEMTEED------ 413
Query: 390 MISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG-RWAHEYVLNN 448
V+PNEIT V++ A +G + +G + E +
Sbjct: 414 -------------------------VQPNEITFVALLTACTHAGLVDQGMSFFKEMKTIH 448
Query: 449 SITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANL 505
++ A I+D+ K G + A++ + +V W+ ++ H D L
Sbjct: 449 HVSPQVEHCACIVDLLCKSGRLREAYKFICDMEVEPNAVI-WSTLLSACRAHADVEL 504
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 100/227 (44%), Gaps = 45/227 (19%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E+ LV L C+ + G QI S + L +++ ++LI++Y KCG + +A+S
Sbjct: 317 EVTLVGVLSACAQLGSDELGGQIGSHVESQNLPLTSYLGSALIDMYTKCGHVGRARS--- 373
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
VF++ K +++ SM+ G A N ++A+ +
Sbjct: 374 ----------------------------VFNRMEHKVVITWNSMMRGLALNGFAQDAITL 405
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGI-------WECRMLHGLVIKLMIDGFVIISTN 195
+++M V PNE+T +++++ H G + E + +H + + V
Sbjct: 406 YKEMTEEDVQPNEITFVALLTACTHAGLVDQGMSFFKEMKTIHHVSPQ------VEHCAC 459
Query: 196 LLNMYCVCSSLVEARSLFDEMK-ERNIVSWNVMLNGFAKAGLVELAR 241
++++ C L EA +M+ E N V W+ +L+ VELA+
Sbjct: 460 IVDLLCKSGRLREAYKFICDMEVEPNAVIWSTLLSACRAHADVELAK 506
>gi|357520433|ref|XP_003630505.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524527|gb|AET04981.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 998
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 194/637 (30%), Positives = 310/637 (48%), Gaps = 96/637 (15%)
Query: 26 LVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCS 85
L S L C + G+QIH + +SG+ + + N I+ Y KC
Sbjct: 245 LSSVLSACLMLKFLEGGKQIHCYVLRSGIVMDVSMVNGFIDFYFKC-------------- 290
Query: 86 TLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRD 145
++ R++FD+ K VS+T++I G QN R+AL++F +
Sbjct: 291 -----------------HKVQLGRKLFDRMVDKNVVSWTTVIAGCMQNSFHRDALDLFVE 333
Query: 146 MRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSS 205
M +G P+ SV++S L + + R +H IK+ ID + L++MY C S
Sbjct: 334 MARMGWNPDAFGCTSVLNSCGSLVALEKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDS 393
Query: 206 LVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQV 265
L +AR ++F + + D+VS+ MI+GY +
Sbjct: 394 LTDAR-------------------------------KVFNLMAAIDLVSYNAMIEGYSRQ 422
Query: 266 ERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQ 325
++L EAL ++R M +P ++ V L+ QIH +I+K G +F
Sbjct: 423 DKLCEALDLFREMRLSLSSPTLLIFVSLLGVSASLYHLELSNQIHGLIIKYGVSLDEFAG 482
Query: 326 ATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVY 385
+ +I Y+ C R+ DAR +F +Q +D+
Sbjct: 483 SALIDVYSKCSRVG-------------------------------DARLVFEEIQDKDIV 511
Query: 386 SWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYV 445
W+AM SGY Q + +L+L+ + + +KPNE T +V A ++ +L+ G+ H V
Sbjct: 512 VWTAMFSGYTQQSENEESLKLYKCLQMSRLKPNEFTFAAVITAASNIASLRHGQQFHNQV 571
Query: 446 LNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANL 505
+ + ++ ++DMYAK GSI A + F + T+ WN++I A HG+A
Sbjct: 572 IKMGFDDDPFVANTLVDMYAKSGSIEEAHKAFISTNWKDTAC--WNSMIATYAQHGEAEK 629
Query: 506 TLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMV 565
L+++ D+ +K N +TF+GVLS C H GL+DLG +F SM S + +EP ++HY CMV
Sbjct: 630 ALQVFEDMIMEGLKPNYVTFVGVLSACSHTGLLDLGFDHFDSM-SQFGIEPGIEHYVCMV 688
Query: 566 DLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGP 625
LLGRAG+L +A+E I MP+K V+W +LL+A R+ GNVE+G AA+ P+
Sbjct: 689 SLLGRAGKLYEAKEFIEKMPIKQAAVVWRSLLSACRVSGNVELGTYAAEMAISCNPADSG 748
Query: 626 SRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
S VLLSNI+A G W + +R++M G+ + PG S
Sbjct: 749 SYVLLSNIFASKGMWVNVRRLREKMDISGVVKEPGCS 785
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 138/604 (22%), Positives = 254/604 (42%), Gaps = 101/604 (16%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E L S +R C+ ++ QIH L+ K G + ++ SLI+ Y K I A+ +FD
Sbjct: 141 EYILASVVRACTQFGGLNPALQIHGLVVKGGYVQDVYVCTSLIDFYTKHACIDDARLLFD 200
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+I+GY + R + ++FD+
Sbjct: 201 GLQVKTSFTWTTIIAGYSKQGRSQVSLKLFDQ---------------------------- 232
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
M+ V P++ L+SV+S+ + L + + +H V++ I V + ++ Y
Sbjct: 233 ---MKEGHVCPDKYVLSSVLSACLMLKFLEGGKQIHCYVLRSGIVMDVSMVNGFIDFYFK 289
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
C + R LFD M ++N+VSW T+I G
Sbjct: 290 CHKVQLGRKLFDRMVDKNVVSWT-------------------------------TVIAGC 318
Query: 263 LQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD 322
+Q +AL ++ M G P+ ++++CG +A +G Q+H+ +K D D
Sbjct: 319 MQNSFHRDALDLFVEMARMGWNPDAFGCTSVLNSCGSLVALEKGRQVHAYAIKVNIDNDD 378
Query: 323 FIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKR 382
F++ +I YA C + AR F L + S+NA+I G+ R + +A LF M+
Sbjct: 379 FVKNGLIDMYAKCDSLTDARKVFNLMAAIDLVSYNAMIEGYSRQDKLCEALDLFREMR-- 436
Query: 383 DVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAH 442
++L P + VS+ AS L+ H
Sbjct: 437 -------------------LSLS----------SPTLLIFVSLLGVSASLYHLELSNQIH 467
Query: 443 EYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGD 502
++ ++L++ +A+ID+Y+KC + A VF I+D+ V W A+ G +
Sbjct: 468 GLIIKYGVSLDEFAGSALIDVYSKCSRVGDARLVFEEIQDKDIVV--WTAMFSGYTQQSE 525
Query: 503 ANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKS-MKSVYNVEPDLKHY 561
+LK+Y L+ +K N TF V++ + + G+++ +K ++ +P + +
Sbjct: 526 NEESLKLYKCLQMSRLKPNEFTFAAVITAASNIASLRHGQQFHNQVIKMGFDDDPFVAN- 584
Query: 562 GCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKS--LAGL 619
+VD+ ++G +E+A + S K D W +++A HG E + + + GL
Sbjct: 585 -TLVDMYAKSGSIEEAHKAFISTNWK-DTACWNSMIATYAQHGEAEKALQVFEDMIMEGL 642
Query: 620 QPSH 623
+P++
Sbjct: 643 KPNY 646
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 129/568 (22%), Positives = 237/568 (41%), Gaps = 101/568 (17%)
Query: 34 SAHIAVSQGQQIHSLIFKSGL-ESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVAC 92
S HI + +IHS I G + + F+ N+L++ Y+K L++ A +FD+ S
Sbjct: 51 SPHIPCCK--KIHSKIVVFGFHKHDIFLVNTLLHAYSKLNLVNHANKLFDTMSH------ 102
Query: 93 NIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF-RDMRILGV 151
K V+++SM+ + + EAL +F + MR
Sbjct: 103 -------------------------KNLVTWSSMVSMYTHHSHCLEALMLFVQFMRSCNE 137
Query: 152 IPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARS 211
PNE LASV+ + GG+ +HGLV+K V + T+L++ Y + + +AR
Sbjct: 138 KPNEYILASVVRACTQFGGLNPALQIHGLVVKGGYVQDVYVCTSLIDFYTKHACIDDARL 197
Query: 212 LFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEA 271
LFD ++ + +W ++ G++K G +++ +LF++ M +G+
Sbjct: 198 LFDGLQVKTSFTWTTIIAGYSKQGRSQVSLKLFDQ-----------MKEGH--------- 237
Query: 272 LTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHF 331
+ P+ ++ ++SAC G QIH ++++G + I F
Sbjct: 238 -----------VCPDKYVLSSVLSACLMLKFLEGGKQIHCYVLRSGIVMDVSMVNGFIDF 286
Query: 332 YAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMI 391
Y C ++ L R F+ + ++ SW +IAG ++N D
Sbjct: 287 YFKCHKVQLGRKLFDRMVDKNVVSWTTVIAGCMQNSFHRD-------------------- 326
Query: 392 SGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSIT 451
AL+LF M G P+ SV + S L++GR H Y + +I
Sbjct: 327 -----------ALDLFVEMARMGWNPDAFGCTSVLNSCGSLVALEKGRQVHAYAIKVNID 375
Query: 452 LNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYS 511
+D + +IDMYAKC S+ A +VF + + +NA+I G + L ++
Sbjct: 376 NDDFVKNGLIDMYAKCDSLTDARKVFNLM--AAIDLVSYNAMIEGYSRQDKLCEALDLFR 433
Query: 512 DLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRA 571
++ + F+ +L ++L + + Y V D ++D+ +
Sbjct: 434 EMRLSLSSPTLLIFVSLLGVSASLYHLELSNQ-IHGLIIKYGVSLDEFAGSALIDVYSKC 492
Query: 572 GQLEDAEEVIRSMPMKADVVIWGTLLAA 599
++ DA V + K D+V+W + +
Sbjct: 493 SRVGDARLVFEEIQDK-DIVVWTAMFSG 519
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 95/223 (42%), Gaps = 40/223 (17%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E + + S ++ GQQ H+ + K G + + F+ N+L+++YAK G I +A F
Sbjct: 545 EFTFAAVITAASNIASLRHGQQFHNQVIKMGFDDDPFVANTLVDMYAKSGSIEEAHKAFI 604
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
S + D N MI+ Y AQ+ +AL+V
Sbjct: 605 STNWKDTACWNSMIATY-------------------------------AQHGEAEKALQV 633
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLG----GIWECRMLHGLVIKLMIDGFVIISTNLLN 198
F DM + G+ PN VT V+S+ H G G + I+ I+ +V +++
Sbjct: 634 FEDMIMEGLKPNYVTFVGVLSACSHTGLLDLGFDHFDSMSQFGIEPGIEHYVC----MVS 689
Query: 199 MYCVCSSLVEARSLFDEMK-ERNIVSWNVMLNGFAKAGLVELA 240
+ L EA+ ++M ++ V W +L+ +G VEL
Sbjct: 690 LLGRAGKLYEAKEFIEKMPIKQAAVVWRSLLSACRVSGNVELG 732
>gi|356545955|ref|XP_003541398.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g37310-like [Glycine max]
Length = 667
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 185/644 (28%), Positives = 327/644 (50%), Gaps = 71/644 (11%)
Query: 25 ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSC 84
A SAL++CS H + QG+Q+H+ + + + F+ + LI Y+K
Sbjct: 36 AYGSALQHCSDHRLLRQGKQLHARLILLSVTPDNFLASKLILFYSK-------------- 81
Query: 85 STLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFR 144
++ + AR+VFD TP + ++ +M++G++ N +R AL +F
Sbjct: 82 -----------------SNHAHFARKVFDTTPHRNTFTWNAMLLGYSFNSMFRHALNLFG 124
Query: 145 DMRI---LGVIPNEVTLASVISS-SVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMY 200
P+ T++ V+ + + + +H L+++ + + + L+ Y
Sbjct: 125 SFTFSTTPNASPDNFTISCVLKALASSFCSPELAKEVHCLILRRGLYSDIFVLNALITCY 184
Query: 201 CVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMID 260
C C DE V LAR +F+ + +D+V+W MI
Sbjct: 185 CRC----------DE---------------------VWLARHVFDGMSERDIVTWNAMIG 213
Query: 261 GYLQVERLSEALTMYRAML-CDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFD 319
GY Q E +Y ML +APN V V ++ ACG++M G+++H + ++G +
Sbjct: 214 GYSQRRLYDECKRLYLEMLNVSAVAPNVVTAVSVMQACGQSMDLAFGMELHRFVKESGIE 273
Query: 320 CYDFIQATIIHFYAACGRINLARLQFE-LGIKDHIASWNALIAGFIRNGMIEDARQLFNN 378
+ ++ YA CGR++ AR FE + KD + ++ A+I+G++ G+++DA +F
Sbjct: 274 IDVSLSNAVVAMYAKCGRLDYAREMFEGMREKDEV-TYGAIISGYMDYGLVDDAMGVFRG 332
Query: 379 MQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG 438
++ + W+A+ISG QN+Q +L M +G+ PN +T+ S+ + + L+ G
Sbjct: 333 VENPGLNMWNAVISGMVQNKQFEGVFDLVRQMQGSGLSPNAVTLASILPSFSYFSNLRGG 392
Query: 439 RWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLA 498
+ H Y + N +S +IID Y K G I A VF + R+ + W +II A
Sbjct: 393 KEVHGYAIRRGYEQNVYVSTSIIDAYGKLGCICGARWVFDLSQSRSLII--WTSIISAYA 450
Query: 499 MHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDL 558
HGDA L L +Y+ + + I+ + +T VL+ C H+GLVD F SM S Y ++P +
Sbjct: 451 AHGDAGLALGLYAQMLDKGIRPDPVTLTSVLTACAHSGLVDEAWNIFNSMPSKYGIQPLV 510
Query: 559 KHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAG 618
+HY CMV +L RAG+L +A + I MP++ +WG LL + + G+VE+G+ A L
Sbjct: 511 EHYACMVGVLSRAGKLSEAVQFISEMPIEPSAKVWGPLLHGASVFGDVEIGKFACDHLFE 570
Query: 619 LQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
++P + + ++++N+YA AG+WE A +R+ M+ G++++ G S
Sbjct: 571 IEPENTGNYIIMANLYAHAGKWEQAGEVRERMKVIGLQKIRGSS 614
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 140/586 (23%), Positives = 250/586 (42%), Gaps = 118/586 (20%)
Query: 6 FHSVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLI 65
F + N+ N S AL S+ +CS +A +++H LI + GL S+ F+ N+LI
Sbjct: 128 FSTTPNASPDNFTISCVLKALASS--FCSPELA----KEVHCLILRRGLYSDIFVLNALI 181
Query: 66 NLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTS 125
Y +C + A+ +FD S D V N MI GY R ++D
Sbjct: 182 TCYCRCDEVWLARHVFDGMSERDIVTWNAMIGGY-------SQRRLYD------------ 222
Query: 126 MIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLM 185
+C R LE+ + + V PN VT SV+ + + LH V +
Sbjct: 223 --------ECKRLYLEM---LNVSAVAPNVVTAVSVMQACGQSMDLAFGMELHRFVKESG 271
Query: 186 IDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFE 245
I+ V +S ++ MY C L AR +F+ M+E++ V++ +++G+ GLV+ A +F
Sbjct: 272 IEIDVSLSNAVVAMYAKCGRLDYAREMFEGMREKDEVTYGAIISGYMDYGLVDDAMGVFR 331
Query: 246 RIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGE 305
+ + + W +I G +Q ++ + R M G++PN V + ++ +
Sbjct: 332 GVENPGLNMWNAVISGMVQNKQFEGVFDLVRQMQGSGLSPNAVTLASILPSFSYFSNLRG 391
Query: 306 GLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIR 365
G ++H ++ G++ ++ +II Y G I AR F+L
Sbjct: 392 GKEVHGYAIRRGYEQNVYVSTSIIDAYGKLGCICGARWVFDLS----------------- 434
Query: 366 NGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSV 425
Q R + W+++IS YA + +AL L+ M+D G++P+ +T+ SV
Sbjct: 435 --------------QSRSLIIWTSIISAYAAHGDAGLALGLYAQMLDKGIRPDPVTLTSV 480
Query: 426 FCAIASSGTLKEGRWAHEYVLNNSITLNDNLS------AAIIDMYAKCGSINTAFEVFYH 479
A A SG + E + + NS+ + A ++ + ++ G ++ A +
Sbjct: 481 LTACAHSGLVDEA-----WNIFNSMPSKYGIQPLVEHYACMVGVLSRAGKLSEAVQFISE 535
Query: 480 IRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVD 539
+ + P +A + G +HG + ++ D+E IG + C H
Sbjct: 536 M-----PIEP-SAKVWGPLLHGAS-----VFGDVE-----------IGKFA-CDH----- 567
Query: 540 LGERYFKSMKSVYNVEPD-LKHYGCMVDLLGRAGQLEDAEEVIRSM 584
++ +EP+ +Y M +L AG+ E A EV M
Sbjct: 568 -----------LFEIEPENTGNYIIMANLYAHAGKWEQAGEVRERM 602
>gi|297794613|ref|XP_002865191.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311026|gb|EFH41450.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 697
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 190/576 (32%), Positives = 307/576 (53%), Gaps = 48/576 (8%)
Query: 94 IMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIP 153
++I ++ N RL++AREVFD+ P YT MI G+ +++ +AL +F +M + V
Sbjct: 40 VLICNHLLNRRLDEAREVFDQVPSPHVSLYTKMISGYTRSNRLVDALNLFDEMPLRDV-- 97
Query: 154 NEVTLASVISSSVHLGGIWECRMLHGLVIKL---MIDGFVIISTNLLNMYCVCSSLVEAR 210
V+ S+IS V G I +K+ M + V+ T ++N + +A
Sbjct: 98 --VSWNSMISGCVECGDI-------DTAVKMFDEMPERSVVSWTAMVNGCFRFGMVDQAE 148
Query: 211 SLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSE 270
LF +M ++I +WN M++G+ + G V+ A +LF+++P K+V+SW TMI G Q ER E
Sbjct: 149 RLFCQMPVKDIAAWNAMVHGYLQFGKVDDALKLFKQMPRKNVISWTTMICGLDQNERSGE 208
Query: 271 ALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIH 330
AL +++ ML I +I+AC A AF G Q+H I+K+GF +++ A++I
Sbjct: 209 ALNLFKNMLRCCIKSTSRTFTCVITACANAPAFHMGTQVHGFIIKSGFLYEEYVTASLIT 268
Query: 331 FYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAM 390
YA C R ED+R++F M V W+A+
Sbjct: 269 LYANCKRT-------------------------------EDSRKVFGEMVHEKVAVWTAL 297
Query: 391 ISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSI 450
+SGY+ N + AL +F M+ + PN+ T S + ++ GTL G+ H + +
Sbjct: 298 LSGYSLNRKHEDALNVFSEMIRNSILPNQSTFASGLNSCSALGTLDWGKEIHGVAVKLGL 357
Query: 451 TLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIY 510
+ +++ MY+ G++N A VF I + S+ WN+II G A HG I+
Sbjct: 358 GTVAFVGNSLVVMYSDSGNVNDAVSVFIEIFKK--SIVSWNSIIVGCAQHGRGKWAFVIF 415
Query: 511 SDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYN-VEPDLKHYGCMVDLLG 569
+ + N + + ITF G+LS C H G + G + F + S N ++ ++HY CMVD+LG
Sbjct: 416 GQMIRLNKEPDEITFTGLLSACSHCGFLQKGRKLFYYISSGLNHIDRKIQHYTCMVDILG 475
Query: 570 RAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVL 629
R G+L++AE++I SM +K + ++W LL+A R+H +V+ GE+AA ++ L + VL
Sbjct: 476 RCGELKEAEKLIESMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYVL 535
Query: 630 LSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGVV 665
LSNIYA AGRW +R +M+ G+ + PG S VV
Sbjct: 536 LSNIYASAGRWSSVSKLRVKMKQKGIMKKPGSSWVV 571
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 108/483 (22%), Positives = 189/483 (39%), Gaps = 110/483 (22%)
Query: 62 NSLINLYAKCGLISQAKSMFD-------------------------------SCSTLDPV 90
NS+I+ +CG I A MFD D
Sbjct: 101 NSMISGCVECGDIDTAVKMFDEMPERSVVSWTAMVNGCFRFGMVDQAERLFCQMPVKDIA 160
Query: 91 ACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILG 150
A N M+ GY++ +++DA ++F + P K +S+T+MI G QN+ EAL +F++M
Sbjct: 161 AWNAMVHGYLQFGKVDDALKLFKQMPRKNVISWTTMICGLDQNERSGEALNLFKNMLRCC 220
Query: 151 VIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFV---IISTNLLNMYCVCSSLV 207
+ T VI++ + +HG +IK GF+ ++ +L+ +Y C
Sbjct: 221 IKSTSRTFTCVITACANAPAFHMGTQVHGFIIK---SGFLYEEYVTASLITLYANCKRTE 277
Query: 208 EARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVER 267
++R +F EM + W +L+G++ L R +
Sbjct: 278 DSRKVFGEMVHEKVAVWTALLSGYS------LNR-------------------------K 306
Query: 268 LSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQAT 327
+AL ++ M+ + I PN +++C G +IH + VK G F+ +
Sbjct: 307 HEDALNVFSEMIRNSILPNQSTFASGLNSCSALGTLDWGKEIHGVAVKLGLGTVAFVGNS 366
Query: 328 IIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSW 387
++ Y+ G +N A F K I SWN++I
Sbjct: 367 LVVMYSDSGNVNDAVSVFIEIFKKSIVSWNSIIV-------------------------- 400
Query: 388 SAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLN 447
G AQ+ + A +F M+ +P+EIT + A + G L++GR Y+ +
Sbjct: 401 -----GCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLQKGRKLFYYISS 455
Query: 448 --NSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSP----WNAIICGLAMHG 501
N I ++D+ +CG + A ++ + V P W A++ MH
Sbjct: 456 GLNHIDRKIQHYTCMVDILGRCGELKEAEKLI-----ESMVVKPNEMVWLALLSACRMHS 510
Query: 502 DAN 504
D +
Sbjct: 511 DVD 513
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 131/306 (42%), Gaps = 75/306 (24%)
Query: 33 CSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVAC 92
C+ A G Q+H I KSG ++ SLI LYA C
Sbjct: 235 CANAPAFHMGTQVHGFIIKSGFLYEEYVTASLITLYANC--------------------- 273
Query: 93 NIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVI 152
R D+R+VF + + +T+++ G++ N +AL VF +M ++
Sbjct: 274 ----------KRTEDSRKVFGEMVHEKVAVWTALLSGYSLNRKHEDALNVFSEMIRNSIL 323
Query: 153 PNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSL 212
PN+ T AS ++S LG + + +HG+ +KL + + +L+ MY ++ +A S+
Sbjct: 324 PNQSTFASGLNSCSALGTLDWGKEIHGVAVKLGLGTVAFVGNSLVVMYSDSGNVNDAVSV 383
Query: 213 FDEMKERNIVSWNVMLNGFAK-----------------------------------AGLV 237
F E+ +++IVSWN ++ G A+ G +
Sbjct: 384 FIEIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFL 443
Query: 238 ELARELFERIPS------KDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIV 291
+ R+LF I S + + + M+D + L EA + +M+ + PN+++ +
Sbjct: 444 QKGRKLFYYISSGLNHIDRKIQHYTCMVDILGRCGELKEAEKLIESMV---VKPNEMVWL 500
Query: 292 DLISAC 297
L+SAC
Sbjct: 501 ALLSAC 506
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 83/194 (42%), Gaps = 33/194 (17%)
Query: 25 ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSC 84
S L CSA + G++IH + K GL + F+ NSL+ +Y+ G
Sbjct: 328 TFASGLNSCSALGTLDWGKEIHGVAVKLGLGTVAFVGNSLVVMYSDSG------------ 375
Query: 85 STLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFR 144
+NDA VF + K VS+ S+I+G AQ+ + A +F
Sbjct: 376 -------------------NVNDAVSVFIEIFKKSIVSWNSIIVGCAQHGRGKWAFVIFG 416
Query: 145 DMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLM--IDGFVIISTNLLNMYCV 202
M L P+E+T ++S+ H G + + R L + + ID + T ++++
Sbjct: 417 QMIRLNKEPDEITFTGLLSACSHCGFLQKGRKLFYYISSGLNHIDRKIQHYTCMVDILGR 476
Query: 203 CSSLVEARSLFDEM 216
C L EA L + M
Sbjct: 477 CGELKEAEKLIESM 490
>gi|115474659|ref|NP_001060926.1| Os08g0131000 [Oryza sativa Japonica Group]
gi|42408463|dbj|BAD09644.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50725835|dbj|BAD33365.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113622895|dbj|BAF22840.1| Os08g0131000 [Oryza sativa Japonica Group]
gi|215704880|dbj|BAG94908.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215712334|dbj|BAG94461.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 674
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 195/636 (30%), Positives = 320/636 (50%), Gaps = 48/636 (7%)
Query: 62 NSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCV 121
N+L+ Y + G + A+ +FD + D ++ +++ Y L AR VFD P +
Sbjct: 42 NALLTSYGRRGRLRDAQLLFDQMPSRDVISWTALLTAYADGGDLASARLVFDDMPRRNAP 101
Query: 122 SYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHG-- 179
S+ +++ + + R A +F M N V+ ++IS G+ + MLH
Sbjct: 102 SWNALLSVYLRAARPRAAHALFYKMPA----KNAVSYGAIIS------GLAKAEMLHEAE 151
Query: 180 LVIKLMIDGF--VIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLV 237
LV + M + + S L+ Y L A +F+ M R+++SW+ M++G K G V
Sbjct: 152 LVYEEMPWQWRDPVGSNALMAGYLRVGELAMALRVFEGMTVRDVISWSAMVDGLCKHGSV 211
Query: 238 ELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISAC 297
AR +F+ +P ++VVSW +MI GY++ + L ++ M +G+ N + + AC
Sbjct: 212 SEARRVFDAMPERNVVSWTSMIRGYVKRGMCRDGLLLFLNMRREGVQVNTTTLSVALDAC 271
Query: 298 GRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWN 357
A EG+QIH++I+ GF+ F+ +II Y+ G + A+ F+ + I SWN
Sbjct: 272 AAASLAREGIQIHNLIISMGFELDIFLGDSIIIMYSRFGWMVDAKRAFDCMQQKDIVSWN 331
Query: 358 ALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMV------ 411
+LI G++++ M+E+A LF M ++D SW++M+ G+A ++ELF M
Sbjct: 332 SLITGYVQHDMVEEAHVLFKLMHQKDAVSWTSMVVGFANRGWMRESVELFEQMPVKDEVA 391
Query: 412 -------------------------DAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVL 446
G KPN I + A+AS L +GR AH Y +
Sbjct: 392 WTAIISSFITNGDYLSAVRWFCRMSQEGCKPNTIAFSCLLSALASLAMLNQGRQAHAYSI 451
Query: 447 NNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLT 506
N + + +++ MYAKCG + A+ VF I + S+ N++I HG
Sbjct: 452 NMGWVFDSAVHTSLVSMYAKCGRLAEAYHVFSSISN--PSLIAINSMITAFVQHGFVEDA 509
Query: 507 LKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVD 566
LK+++ ++ K N +TF+G+L+ C AG V G YF+SM+ VY VEP+ +HY CMVD
Sbjct: 510 LKLFTKMQNAGYKPNHVTFLGILTGCARAGFVQQGYNYFESMRPVYGVEPNPEHYTCMVD 569
Query: 567 LLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPS 626
LLGRAG L +A E+I SMP W LL+AS +H N+ + AA+ L P +
Sbjct: 570 LLGRAGLLAEALEMINSMPQNDHSDAWAALLSASSLHSNLAFAKIAAQKLLEKDPYDATA 629
Query: 627 RVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
+LS +++ AG ++ ++ + KR PG+S
Sbjct: 630 YTVLSRMFSSAGMEDEEMLKVVQLSNLASKR-PGYS 664
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 98/425 (23%), Positives = 198/425 (46%), Gaps = 57/425 (13%)
Query: 26 LVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCS 85
L AL C+A +G QIH+LI G E + F+ +S+I +Y++ G + AK FD
Sbjct: 264 LSVALDACAAASLAREGIQIHNLIISMGFELDIFLGDSIIIMYSRFGWMVDAKRAFDCMQ 323
Query: 86 TLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRD 145
D V+ N +I+GY+++D + +A +F K VS+TSM++GFA RE++E+F
Sbjct: 324 QKDIVSWNSLITGYVQHDMVEEAHVLFKLMHQKDAVSWTSMVVGFANRGWMRESVELFEQ 383
Query: 146 MRILGVIPNEVTLASVISSSVHLGGI-WECRMLHGLVIKLMIDGFVIISTNLLNMYCVCS 204
M + + ++S I++ +L + W CRM +G N + C+ S
Sbjct: 384 MPVKDEVAWTAIISSFITNGDYLSAVRWFCRMSQ--------EG---CKPNTIAFSCLLS 432
Query: 205 SLVEARSLFDEMKERNIVSWNV-----------MLNGFAKAGLVELARELFERIPSKDVV 253
+L + ++ ++ ++ + S N+ +++ +AK G + A +F I + ++
Sbjct: 433 ALA-SLAMLNQGRQAHAYSINMGWVFDSAVHTSLVSMYAKCGRLAEAYHVFSSISNPSLI 491
Query: 254 SWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSII 313
+ +MI ++Q + +AL ++ M G PN V + +++ C RA
Sbjct: 492 AINSMITAFVQHGFVEDALKLFTKMQNAGYKPNHVTFLGILTGCARAG-----------F 540
Query: 314 VKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDAR 373
V+ G++ ++ ++ G++ + + ++ R G++ +A
Sbjct: 541 VQQGYNYFESMRPV-------------------YGVEPNPEHYTCMVDLLGRAGLLAEAL 581
Query: 374 QLFNNMQKRD-VYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASS 432
++ N+M + D +W+A++S A + N+A P + T +V + SS
Sbjct: 582 EMINSMPQNDHSDAWAALLS--ASSLHSNLAFAKIAAQKLLEKDPYDATAYTVLSRMFSS 639
Query: 433 GTLKE 437
+++
Sbjct: 640 AGMED 644
>gi|12957718|gb|AAK09236.1|AC084320_23 hypothetical protein [Oryza sativa Japonica Group]
gi|108711388|gb|ABF99183.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 843
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 193/623 (30%), Positives = 309/623 (49%), Gaps = 95/623 (15%)
Query: 42 GQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIR 101
G Q+H+L K GLES + N+L+++YAKC C
Sbjct: 266 GVQLHTLAVKYGLESEVAVANTLVSMYAKC-----------KC----------------- 297
Query: 102 NDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASV 161
L+D ++F P V++ MI G QN +AL +F DM+ G+ P+ VTL S+
Sbjct: 298 ---LDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQKSGIRPDSVTLVSL 354
Query: 162 ISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNI 221
+ + L G + + LHG +++ + V + + L+++Y C ++ A+S++D K
Sbjct: 355 LPALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQSVYDSSK---- 410
Query: 222 VSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCD 281
+ DVV TMI GY+ EA+ M+R +L
Sbjct: 411 ---------------------------AIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQ 443
Query: 282 GIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLA 341
GI PN V I ++ AC A G ++HS +K ++ ++++ ++ YA CGR++L+
Sbjct: 444 GIRPNAVAIASVLPACASMAAMKLGQELHSYALKNAYEGRCYVESALMDMYAKCGRLDLS 503
Query: 342 RLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPN 401
+F+ + +D +W++MIS +AQN +P
Sbjct: 504 HY-------------------------------IFSKISAKDEVTWNSMISSFAQNGEPE 532
Query: 402 MALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAII 461
AL LF M GVK + +T+ SV A AS + G+ H V+ I + +A+I
Sbjct: 533 EALNLFREMCMEGVKYSNVTISSVLSACASLPAIYYGKEIHGVVIKGPIRADLFAESALI 592
Query: 462 DMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLN 521
DMY KCG++ A VF + ++ VS WN+II +G ++ + +++ K +
Sbjct: 593 DMYGKCGNLEWAHRVFESMPEKN-EVS-WNSIIASYGAYGLVKESVSLLRHMQEEGFKAD 650
Query: 522 SITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVI 581
+TF+ ++S C HAG V G R F+ M Y + P ++H+ CMVDL RAG+L+ A E+I
Sbjct: 651 HVTFLALVSACAHAGQVQEGLRLFRCMTEEYQIAPRMEHFACMVDLYSRAGKLDKAMELI 710
Query: 582 RSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWE 641
MP K D IWG LL A R+H NVE+ E A++ L L P + VL+SNI A AGRW+
Sbjct: 711 VDMPFKPDAGIWGALLHACRVHRNVELAEIASQELFKLDPHNSGYYVLMSNINAVAGRWD 770
Query: 642 DAFSIRKEMRDCGMKRLPGFSGV 664
+R+ M+D ++++PG+S V
Sbjct: 771 GVSKVRRLMKDTKVQKIPGYSWV 793
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 167/663 (25%), Positives = 269/663 (40%), Gaps = 152/663 (22%)
Query: 26 LVSALRYCSAHIAVSQGQQIHSLIFKSGLE-SNTFIQNSLINLYAKCGLISQAKSMFDSC 84
L++ LR C + +S G Q+H +GL ++T +Q L+ +Y
Sbjct: 42 LLAVLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMY---------------- 85
Query: 85 STLDPVACNIMISGYIRNDRLNDAREVFDKTP---IKCCVSYTSMIMGFAQNDCWREALE 141
+ R DA VF P C + + +I G +R AL
Sbjct: 86 ---------------VLARRFRDAVAVFSSLPRGAAACALPWNWLIRGLTMAGDYRSALL 130
Query: 142 VFRDM--RILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNM 199
+ M +P+ T V+ S LG I R++H L +DG + + + L+ M
Sbjct: 131 FYLKMWAHPSAPLPDSHTFPYVVKSCAALGAIALGRLVHRTARTLGLDGDMFVGSALIKM 190
Query: 200 YCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMI 259
Y L +AR +FD M ER+ V WNVM++G+ KAG V A ELF G M
Sbjct: 191 YANGGLLWDARQVFDGMAERDCVLWNVMMDGYVKAGSVSSAVELF-----------GDM- 238
Query: 260 DGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFD 319
RA C+ PN + +S G+Q+H++ VK G +
Sbjct: 239 ----------------RASGCE---PNFATLACFLSVSATESDLFFGVQLHTLAVKYGLE 279
Query: 320 CYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNM 379
+ T++ YA C ++ F L +D + +WN +I+G ++NG ++ A LF +M
Sbjct: 280 SEVAVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDM 339
Query: 380 QKR---------------------------------------DVYSWSAMISGYAQNEQP 400
QK DV+ SA++ Y +
Sbjct: 340 QKSGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAV 399
Query: 401 NMALELF--------------------HGMVDAGVK-----------PNEITMVSVFCAI 429
MA ++ +GM VK PN + + SV A
Sbjct: 400 RMAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPAC 459
Query: 430 ASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHI--RDRTTSV 487
AS +K G+ H Y L N+ + +A++DMYAKCG ++ + +F I +D T
Sbjct: 460 ASMAAMKLGQELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSHYIFSKISAKDEVT-- 517
Query: 488 SPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKS 547
WN++I A +G+ L ++ ++ +K +++T VLS C + Y K
Sbjct: 518 --WNSMISSFAQNGEPEEALNLFREMCMEGVKYSNVTISSVLSACASLPAI----YYGKE 571
Query: 548 MKSVYNVEP---DLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHG 604
+ V P DL ++D+ G+ G LE A V SMP K +V W +++A+ +G
Sbjct: 572 IHGVVIKGPIRADLFAESALIDMYGKCGNLEWAHRVFESMPEKNEVS-WNSIIASYGAYG 630
Query: 605 NVE 607
V+
Sbjct: 631 LVK 633
Score = 145 bits (365), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 109/484 (22%), Positives = 211/484 (43%), Gaps = 95/484 (19%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+ LVS L + +QG+++H I ++ + + F+ ++L+++Y KC + A+S++DS
Sbjct: 349 VTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQSVYDS 408
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
+D V + MISGY+ N G +Q EA+++F
Sbjct: 409 SKAIDVVIGSTMISGYVLN--------------------------GMSQ-----EAVKMF 437
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
R + G+ PN V +ASV+ + + + + LH +K +G + + L++MY C
Sbjct: 438 RYLLEQGIRPNAVAIASVLPACASMAAMKLGQELHSYALKNAYEGRCYVESALMDMYAKC 497
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYL 263
L + +F ++ ++ V+WN M++ FA+ G E
Sbjct: 498 GRLDLSHYIFSKISAKDEVTWNSMISSFAQNGEPE------------------------- 532
Query: 264 QVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDF 323
EAL ++R M +G+ ++V I ++SAC A G +IH +++K F
Sbjct: 533 ------EALNLFREMCMEGVKYSNVTISSVLSACASLPAIYYGKEIHGVVIKGPIRADLF 586
Query: 324 IQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRD 383
++ +I Y CG + A FE + + SWN++IA + G+++++ L +MQ+
Sbjct: 587 AESALIDMYGKCGNLEWAHRVFESMPEKNEVSWNSIIASYGAYGLVKESVSLLRHMQEE- 645
Query: 384 VYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG-RWAH 442
G K + +T +++ A A +G ++EG R
Sbjct: 646 ------------------------------GFKADHVTFLALVSACAHAGQVQEGLRLFR 675
Query: 443 EYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGD 502
I A ++D+Y++ G ++ A E+ + + + W A++ +H +
Sbjct: 676 CMTEEYQIAPRMEHFACMVDLYSRAGKLDKAMELIVDMPFKPDA-GIWGALLHACRVHRN 734
Query: 503 ANLT 506
L
Sbjct: 735 VELA 738
>gi|222625907|gb|EEE60039.1| hypothetical protein OsJ_12814 [Oryza sativa Japonica Group]
Length = 852
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 193/623 (30%), Positives = 309/623 (49%), Gaps = 95/623 (15%)
Query: 42 GQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIR 101
G Q+H+L K GLES + N+L+++YAKC C
Sbjct: 266 GVQLHTLAVKYGLESEVAVANTLVSMYAKC-----------KC----------------- 297
Query: 102 NDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASV 161
L+D ++F P V++ MI G QN +AL +F DM+ G+ P+ VTL S+
Sbjct: 298 ---LDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQKSGIRPDSVTLVSL 354
Query: 162 ISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNI 221
+ + L G + + LHG +++ + V + + L+++Y C ++ A+S++D K
Sbjct: 355 LPALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQSVYDSSK---- 410
Query: 222 VSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCD 281
+ DVV TMI GY+ EA+ M+R +L
Sbjct: 411 ---------------------------AIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQ 443
Query: 282 GIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLA 341
GI PN V I ++ AC A G ++HS +K ++ ++++ ++ YA CGR++L+
Sbjct: 444 GIRPNAVAIASVLPACASMAAMKLGQELHSYALKNAYEGRCYVESALMDMYAKCGRLDLS 503
Query: 342 RLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPN 401
+F+ + +D +W++MIS +AQN +P
Sbjct: 504 HY-------------------------------IFSKISAKDEVTWNSMISSFAQNGEPE 532
Query: 402 MALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAII 461
AL LF M GVK + +T+ SV A AS + G+ H V+ I + +A+I
Sbjct: 533 EALNLFREMCMEGVKYSNVTISSVLSACASLPAIYYGKEIHGVVIKGPIRADLFAESALI 592
Query: 462 DMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLN 521
DMY KCG++ A VF + ++ VS WN+II +G ++ + +++ K +
Sbjct: 593 DMYGKCGNLEWAHRVFESMPEKN-EVS-WNSIIASYGAYGLVKESVSLLRHMQEEGFKAD 650
Query: 522 SITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVI 581
+TF+ ++S C HAG V G R F+ M Y + P ++H+ CMVDL RAG+L+ A E+I
Sbjct: 651 HVTFLALVSACAHAGQVQEGLRLFRCMTEEYQIAPRMEHFACMVDLYSRAGKLDKAMELI 710
Query: 582 RSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWE 641
MP K D IWG LL A R+H NVE+ E A++ L L P + VL+SNI A AGRW+
Sbjct: 711 VDMPFKPDAGIWGALLHACRVHRNVELAEIASQELFKLDPHNSGYYVLMSNINAVAGRWD 770
Query: 642 DAFSIRKEMRDCGMKRLPGFSGV 664
+R+ M+D ++++PG+S V
Sbjct: 771 GVSKVRRLMKDTKVQKIPGYSWV 793
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 167/663 (25%), Positives = 269/663 (40%), Gaps = 152/663 (22%)
Query: 26 LVSALRYCSAHIAVSQGQQIHSLIFKSGLE-SNTFIQNSLINLYAKCGLISQAKSMFDSC 84
L++ LR C + +S G Q+H +GL ++T +Q L+ +Y
Sbjct: 42 LLAVLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMY---------------- 85
Query: 85 STLDPVACNIMISGYIRNDRLNDAREVFDKTP---IKCCVSYTSMIMGFAQNDCWREALE 141
+ R DA VF P C + + +I G +R AL
Sbjct: 86 ---------------VLARRFRDAVAVFSSLPRGAAACALPWNWLIRGLTMAGDYRSALL 130
Query: 142 VFRDM--RILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNM 199
+ M +P+ T V+ S LG I R++H L +DG + + + L+ M
Sbjct: 131 FYLKMWAHPSAPLPDSHTFPYVVKSCAALGAIALGRLVHRTARTLGLDGDMFVGSALIKM 190
Query: 200 YCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMI 259
Y L +AR +FD M ER+ V WNVM++G+ KAG V A ELF G M
Sbjct: 191 YANGGLLWDARQVFDGMAERDCVLWNVMMDGYVKAGSVSSAVELF-----------GDM- 238
Query: 260 DGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFD 319
RA C+ PN + +S G+Q+H++ VK G +
Sbjct: 239 ----------------RASGCE---PNFATLACFLSVSATESDLFFGVQLHTLAVKYGLE 279
Query: 320 CYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNM 379
+ T++ YA C ++ F L +D + +WN +I+G ++NG ++ A LF +M
Sbjct: 280 SEVAVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDM 339
Query: 380 QKR---------------------------------------DVYSWSAMISGYAQNEQP 400
QK DV+ SA++ Y +
Sbjct: 340 QKSGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAV 399
Query: 401 NMALELF--------------------HGMVDAGVK-----------PNEITMVSVFCAI 429
MA ++ +GM VK PN + + SV A
Sbjct: 400 RMAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPAC 459
Query: 430 ASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHI--RDRTTSV 487
AS +K G+ H Y L N+ + +A++DMYAKCG ++ + +F I +D T
Sbjct: 460 ASMAAMKLGQELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSHYIFSKISAKDEVT-- 517
Query: 488 SPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKS 547
WN++I A +G+ L ++ ++ +K +++T VLS C + Y K
Sbjct: 518 --WNSMISSFAQNGEPEEALNLFREMCMEGVKYSNVTISSVLSACASLPAI----YYGKE 571
Query: 548 MKSVYNVEP---DLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHG 604
+ V P DL ++D+ G+ G LE A V SMP K +V W +++A+ +G
Sbjct: 572 IHGVVIKGPIRADLFAESALIDMYGKCGNLEWAHRVFESMPEKNEVS-WNSIIASYGAYG 630
Query: 605 NVE 607
V+
Sbjct: 631 LVK 633
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 109/484 (22%), Positives = 211/484 (43%), Gaps = 95/484 (19%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+ LVS L + +QG+++H I ++ + + F+ ++L+++Y KC + A+S++DS
Sbjct: 349 VTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQSVYDS 408
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
+D V + MISGY+ N G +Q EA+++F
Sbjct: 409 SKAIDVVIGSTMISGYVLN--------------------------GMSQ-----EAVKMF 437
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
R + G+ PN V +ASV+ + + + + LH +K +G + + L++MY C
Sbjct: 438 RYLLEQGIRPNAVAIASVLPACASMAAMKLGQELHSYALKNAYEGRCYVESALMDMYAKC 497
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYL 263
L + +F ++ ++ V+WN M++ FA+ G E
Sbjct: 498 GRLDLSHYIFSKISAKDEVTWNSMISSFAQNGEPE------------------------- 532
Query: 264 QVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDF 323
EAL ++R M +G+ ++V I ++SAC A G +IH +++K F
Sbjct: 533 ------EALNLFREMCMEGVKYSNVTISSVLSACASLPAIYYGKEIHGVVIKGPIRADLF 586
Query: 324 IQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRD 383
++ +I Y CG + A FE + + SWN++IA + G+++++ L +MQ+
Sbjct: 587 AESALIDMYGKCGNLEWAHRVFESMPEKNEVSWNSIIASYGAYGLVKESVSLLRHMQEE- 645
Query: 384 VYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG-RWAH 442
G K + +T +++ A A +G ++EG R
Sbjct: 646 ------------------------------GFKADHVTFLALVSACAHAGQVQEGLRLFR 675
Query: 443 EYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGD 502
I A ++D+Y++ G ++ A E+ + + + W A++ +H +
Sbjct: 676 CMTEEYQIAPRMEHFACMVDLYSRAGKLDKAMELIVDMPFKPDA-GIWGALLHACRVHRN 734
Query: 503 ANLT 506
L
Sbjct: 735 VELA 738
>gi|449496903|ref|XP_004160258.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 583
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 157/415 (37%), Positives = 245/415 (59%), Gaps = 2/415 (0%)
Query: 240 ARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGR 299
A+ +F+ + + +V W T + + + + ++A++++ + I+P+ ++ AC R
Sbjct: 66 AKLIFQLLDASEVTHWNTCLRSFAEGDSPADAISLFYRLREFDISPDHYTCSFVLKACSR 125
Query: 300 AMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNAL 359
+ G +H + K G F+Q I+H YA CG I +AR F+ + + +WN +
Sbjct: 126 LLDVRNGKIVHGYVEKLGLQSNMFLQNMIVHLYALCGEIGVARKVFDKMPQRDVITWNIM 185
Query: 360 IAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNE 419
IA ++ G E A +LF M +R+V SW++MI GYAQ + A++LF M DAG+ PNE
Sbjct: 186 IARLVKMGDAEGAYKLFAEMPERNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLPNE 245
Query: 420 ITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYH 479
+T+V+V A A G L GR H++ + N + +IDMY KCG + A +F +
Sbjct: 246 VTVVAVLVACADMGNLVLGRRIHDFSNRSGYEKNIRVCNTLIDMYVKCGCLEDACRIFDN 305
Query: 480 IRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVD 539
+ +RT V W+A+I GLA HG A L +++ + +K N++TFIG+L C H G+V+
Sbjct: 306 MEERT--VVSWSAMIAGLAAHGRAEDALALFNKMINTGVKPNAVTFIGILHACSHMGMVE 363
Query: 540 LGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAA 599
G +YF SM Y + P ++HYGCMVDL RAG L++A E I +MP+ + V+WG LL
Sbjct: 364 KGRKYFASMTRDYGIVPRIEHYGCMVDLFSRAGLLQEAHEFIMNMPIAPNGVVWGALLGG 423
Query: 600 SRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCG 654
++H NV++ E A + L+ L P + V+LSNIYA+AGRWED +RK MRD G
Sbjct: 424 CKVHKNVKLAEEATRHLSKLDPLNDGYYVVLSNIYAEAGRWEDVARVRKLMRDRG 478
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 102/415 (24%), Positives = 193/415 (46%), Gaps = 33/415 (7%)
Query: 102 NDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASV 161
N + A+ +F + + + FA+ D +A+ +F +R + P+ T + V
Sbjct: 60 NSSFSYAKLIFQLLDASEVTHWNTCLRSFAEGDSPADAISLFYRLREFDISPDHYTCSFV 119
Query: 162 ISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNI 221
+ + L + +++HG V KL + + + ++++Y +C + AR +FD+M +R++
Sbjct: 120 LKACSRLLDVRNGKIVHGYVEKLGLQSNMFLQNMIVHLYALCGEIGVARKVFDKMPQRDV 179
Query: 222 VSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCD 281
++WN+M+ K G E A +LF +P ++V SW +MI GY Q + EA+ ++ M
Sbjct: 180 ITWNIMIARLVKMGDAEGAYKLFAEMPERNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDA 239
Query: 282 GIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLA 341
G+ PN+V +V ++ AC G +IH ++G++ + T+I Y CG + A
Sbjct: 240 GLLPNEVTVVAVLVACADMGNLVLGRRIHDFSNRSGYEKNIRVCNTLIDMYVKCGCLEDA 299
Query: 342 RLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPN 401
F+ + + SW+A+IAG +G EDA LFN
Sbjct: 300 CRIFDNMEERTVVSWSAMIAGLAAHGRAEDALALFNK----------------------- 336
Query: 402 MALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGR-WAHEYVLNNSITLNDNLSAAI 460
M++ GVKPN +T + + A + G +++GR + + I +
Sbjct: 337 --------MINTGVKPNAVTFIGILHACSHMGMVEKGRKYFASMTRDYGIVPRIEHYGCM 388
Query: 461 IDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEK 515
+D++++ G + A E ++ V W A++ G +H + L + L K
Sbjct: 389 VDLFSRAGLLQEAHEFIMNMPIAPNGVV-WGALLGGCKVHKNVKLAEEATRHLSK 442
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 123/516 (23%), Positives = 216/516 (41%), Gaps = 104/516 (20%)
Query: 1 TPLDHFHSVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFI 60
+P D + ++ ++ Y + V L+ CS + V G+ +H + K GL+SN F+
Sbjct: 93 SPADAISLFYRLREFDISPDHYTCSFV--LKACSRLLDVRNGKIVHGYVEKLGLQSNMFL 150
Query: 61 QNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCC 120
QN +++LYA CG I A+ +FD D + NIMI+ ++ A ++F + P +
Sbjct: 151 QNMIVHLYALCGEIGVARKVFDKMPQRDVITWNIMIARLVKMGDAEGAYKLFAEMPERNV 210
Query: 121 VSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGL 180
S+TSMI G+AQ +EA+++F +M G++PNEVT+ +V+ + +G + R +H
Sbjct: 211 RSWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLPNEVTVVAVLVACADMGNLVLGRRIHDF 270
Query: 181 VIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELA 240
+ + + + L++MY C L +A +FD M+ER +VSW+ M+ G A G
Sbjct: 271 SNRSGYEKNIRVCNTLIDMYVKCGCLEDACRIFDNMEERTVVSWSAMIAGLAAHG----- 325
Query: 241 RELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRA 300
R +AL ++ M+ G+ PN V + ++ AC
Sbjct: 326 --------------------------RAEDALALFNKMINTGVKPNAVTFIGILHACS-- 357
Query: 301 MAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALI 360
H +V+ GR A + + GI I + ++
Sbjct: 358 ---------HMGMVEK-------------------GRKYFASMTRDYGIVPRIEHYGCMV 389
Query: 361 AGFIRNGMIEDARQLFNNMQ-KRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNE 419
F R G++++A + NM + W A++ G
Sbjct: 390 DLFSRAGLLQEAHEFIMNMPIAPNGVVWGALLGG-------------------------- 423
Query: 420 ITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYH 479
C + + L E H L+ LND + ++YA+ G V
Sbjct: 424 -------CKVHKNVKLAEEATRH---LSKLDPLNDGYYVVLSNIYAEAGRWEDVARVRKL 473
Query: 480 IRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEK 515
+RDR T W ++ + + G T + D+E+
Sbjct: 474 MRDRGT----WEKLLQRMKLKGYVPNTSVVLLDMEE 505
>gi|115439575|ref|NP_001044067.1| Os01g0715900 [Oryza sativa Japonica Group]
gi|20160882|dbj|BAB89820.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113533598|dbj|BAF05981.1| Os01g0715900 [Oryza sativa Japonica Group]
gi|125571815|gb|EAZ13330.1| hypothetical protein OsJ_03251 [Oryza sativa Japonica Group]
Length = 608
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 185/557 (33%), Positives = 295/557 (52%), Gaps = 38/557 (6%)
Query: 108 AREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILG--VIPNEVTLASVISSS 165
AR +FD P ++I ++ +E L+ F + G V P V L V+ S
Sbjct: 38 ARHLFDAVPRPTPALCGTLISALSRLCSHQELLDAFSSLHRRGSDVPPGCVPL--VVKSC 95
Query: 166 VHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWN 225
L + + +H I + G + + T L++ Y + A +FDEM ++ + N
Sbjct: 96 AILAASRQGKQVHCHAIVRGLLGDIFVQTALVDFYAKNGDMDCAVKVFDEMPVKDPIPMN 155
Query: 226 VMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAP 285
++ G++K+G V AR LF+ + + SW +MI Y EAL ++R ML +G P
Sbjct: 156 CLITGYSKSGDVVKARRLFDGMVRRTSASWNSMIACYAHGGEYQEALRLFRRMLSEGARP 215
Query: 286 NDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQF 345
N + I + S C + G S+I + +Q I+H
Sbjct: 216 NAITIATMFSICAKTGDLETGKWARSLIAEQD------LQNMIVH--------------- 254
Query: 346 ELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALE 405
AL+ +++ I++AR+ F+ MQ+RDV +WS MI+GYAQN +P+ +LE
Sbjct: 255 -----------TALMEMYVKCRAIDEARREFDRMQQRDVVAWSTMIAGYAQNGRPHESLE 303
Query: 406 LFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYA 465
LF M KPNE+T+V V A A G+ + G +V + ++ L L +A+IDMY
Sbjct: 304 LFERMKATSCKPNEVTLVGVLSACAQLGSDELGGQIGSHVESQNLPLTSYLGSALIDMYT 363
Query: 466 KCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITF 525
KCG + A VF + + V WN+++ GLA++G A + +Y ++ + +++ N ITF
Sbjct: 364 KCGHVGRARSVFNRMEHKV--VITWNSMMRGLALNGFAQDAITLYKEMTEEDVQPNEITF 421
Query: 526 IGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMP 585
+ +L+ C HAGLVD G +FK MK++++V P ++H C+VDLL ++G+L +A + I M
Sbjct: 422 VALLTACTHAGLVDQGMSFFKEMKTIHHVSPQVEHCACIVDLLCKSGRLREAYKFICDME 481
Query: 586 MKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFS 645
++ + VIW TLL+A R H +VE+ + AA L L+P + VLLSNIYADAG W D
Sbjct: 482 VEPNAVIWSTLLSACRAHADVELAKLAASKLLVLEPDNSSIYVLLSNIYADAGLWGDVRE 541
Query: 646 IRKEMRDCGMKRLPGFS 662
IR MR +++L +S
Sbjct: 542 IRDLMRSKNVQKLSAYS 558
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 123/477 (25%), Positives = 214/477 (44%), Gaps = 65/477 (13%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
++ C+ A QG+Q+H GL + F+Q +L++ YAK G + A +FD DP
Sbjct: 92 VKSCAILAASRQGKQVHCHAIVRGLLGDIFVQTALVDFYAKNGDMDCAVKVFDEMPVKDP 151
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
+ N +I+GY ++ + AR +FD + S+ SMI +A ++EAL +FR M
Sbjct: 152 IPMNCLITGYSKSGDVVKARRLFDGMVRRTSASWNSMIACYAHGGEYQEALRLFRRMLSE 211
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
G PN +T+A++ S G + + L+ + + +I+ T L+ MY C ++ EA
Sbjct: 212 GARPNAITIATMFSICAKTGDLETGKWARSLIAEQDLQN-MIVHTALMEMYVKCRAIDEA 270
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLS 269
R FD M++R++V+W+ M+ G+A+ G + ELFER+
Sbjct: 271 RREFDRMQQRDVVAWSTMIAGYAQNGRPHESLELFERM---------------------- 308
Query: 270 EALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATII 329
+A C PN+V +V ++SAC + + G QI S + ++ + +I
Sbjct: 309 ------KATSCK---PNEVTLVGVLSACAQLGSDELGGQIGSHVESQNLPLTSYLGSALI 359
Query: 330 HFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSA 389
Y CG + AR F + +WN+++ G NG +DA L+ M + D
Sbjct: 360 DMYTKCGHVGRARSVFNRMEHKVVITWNSMMRGLALNGFAQDAITLYKEMTEED------ 413
Query: 390 MISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG-RWAHEYVLNN 448
V+PNEIT V++ A +G + +G + E +
Sbjct: 414 -------------------------VQPNEITFVALLTACTHAGLVDQGMSFFKEMKTIH 448
Query: 449 SITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANL 505
++ A I+D+ K G + A++ + +V W+ ++ H D L
Sbjct: 449 HVSPQVEHCACIVDLLCKSGRLREAYKFICDMEVEPNAVI-WSTLLSACRAHADVEL 504
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 100/227 (44%), Gaps = 45/227 (19%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E+ LV L C+ + G QI S + L +++ ++LI++Y KCG + +A+S
Sbjct: 317 EVTLVGVLSACAQLGSDELGGQIGSHVESQNLPLTSYLGSALIDMYTKCGHVGRARS--- 373
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
VF++ K +++ SM+ G A N ++A+ +
Sbjct: 374 ----------------------------VFNRMEHKVVITWNSMMRGLALNGFAQDAITL 405
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGI-------WECRMLHGLVIKLMIDGFVIISTN 195
+++M V PNE+T +++++ H G + E + +H + + V
Sbjct: 406 YKEMTEEDVQPNEITFVALLTACTHAGLVDQGMSFFKEMKTIHHVSPQ------VEHCAC 459
Query: 196 LLNMYCVCSSLVEARSLFDEMK-ERNIVSWNVMLNGFAKAGLVELAR 241
++++ C L EA +M+ E N V W+ +L+ VELA+
Sbjct: 460 IVDLLCKSGRLREAYKFICDMEVEPNAVIWSTLLSACRAHADVELAK 506
>gi|225430696|ref|XP_002266026.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840 [Vitis vinifera]
Length = 713
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 189/636 (29%), Positives = 305/636 (47%), Gaps = 95/636 (14%)
Query: 29 ALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLD 88
A + C + V+ G+ +H K+GL ++ F+ ++L+++Y K
Sbjct: 122 AHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTK------------------ 163
Query: 89 PVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRI 148
N ++ + R VF + P++ VS+T++I G + +EAL F +M
Sbjct: 164 -------------NGKIFEGRRVFHEMPMRNVVSWTAIITGLVRAGYNKEALVYFSEMWR 210
Query: 149 LGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVE 208
V + T A + + G + R +H +K D ++ L MY C
Sbjct: 211 SRVEYDSYTFAIALKACADSGALNYGREIHAQAMKKGFDVSSFVANTLATMYNKC----- 265
Query: 209 ARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERL 268
G +E LFE++ +DVVSW T+I +Q+ +
Sbjct: 266 --------------------------GKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQE 299
Query: 269 SEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATI 328
A+ + M ++PN+ +IS C G Q+H++I+ G ++ +I
Sbjct: 300 ECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSI 359
Query: 329 IHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWS 388
+ YA CG++ + + +F+ M +RD+ SWS
Sbjct: 360 MTMYAKCGQLTSSSV-------------------------------IFHEMTRRDIVSWS 388
Query: 389 AMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNN 448
+I+GY+Q + A EL M G KP E + SV A + L+ G+ H YVL+
Sbjct: 389 TIIAGYSQGGHVSEAFELLSWMRMEGPKPTEFALASVLSACGNMAILEHGKQLHAYVLSI 448
Query: 449 SITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLK 508
+ + +A+I+MY KCGSI A +F + + W A+I G A HG + +
Sbjct: 449 GLEHTAMVLSALINMYCKCGSIEEASRIFDAAEN--DDIVSWTAMINGYAEHGYSREVID 506
Query: 509 IYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLL 568
++ + + ++ +S+TFIGVLS C HAGLVDLG RYF +M Y + P +HYGCM+DLL
Sbjct: 507 LFEKIPRVGLRPDSVTFIGVLSACSHAGLVDLGFRYFNAMSKKYQISPSKEHYGCMIDLL 566
Query: 569 GRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRV 628
RAG+L DAE +I +MP D V+W TLL A R+HG+VE G R A+ + L+P+ + +
Sbjct: 567 CRAGRLSDAEHMIEAMPFHRDDVVWSTLLRACRVHGDVERGRRTAERILQLEPNCAGTHI 626
Query: 629 LLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
L+NIYA G+W +A IRK M+ G+ + PG+S +
Sbjct: 627 TLANIYASKGKWREAADIRKLMKSKGVIKEPGWSWI 662
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 115/493 (23%), Positives = 208/493 (42%), Gaps = 103/493 (20%)
Query: 14 KANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGL 73
++ ++ Y A+ AL+ C+ A++ G++IH+ K G + ++F+ N+L +Y KCG
Sbjct: 210 RSRVEYDSYTFAI--ALKACADSGALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGK 267
Query: 74 ISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQN 133
+ ++F+ S D V+ +I+ ++ MG Q
Sbjct: 268 LEYGLTLFEKMSMRDVVSWTTIITTLVQ--------------------------MG--QE 299
Query: 134 DCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIIS 193
+C A++ F MR V PNE T A+VIS +L I LH L++ L + + +
Sbjct: 300 EC---AVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVE 356
Query: 194 TNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVV 253
+++ MY C L + +F EM R+IVSW+ ++ G+++ G V A EL +
Sbjct: 357 NSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYSQGGHVSEAFEL---------L 407
Query: 254 SWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSII 313
SW M +G P + + ++SACG G Q+H+ +
Sbjct: 408 SW----------------------MRMEGPKPTEFALASVLSACGNMAILEHGKQLHAYV 445
Query: 314 VKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDAR 373
+ G + + + +I+ Y CG I A F+ D I SW A+I
Sbjct: 446 LSIGLEHTAMVLSALINMYCKCGSIEEASRIFDAAENDDIVSWTAMI------------- 492
Query: 374 QLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSG 433
+GYA++ ++LF + G++P+ +T + V A + +G
Sbjct: 493 ------------------NGYAEHGYSREVIDLFEKIPRVGLRPDSVTFIGVLSACSHAG 534
Query: 434 TLKEG-RWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTA---FEVFYHIRDRTTSVSP 489
+ G R+ + I+ + +ID+ + G ++ A E RD
Sbjct: 535 LVDLGFRYFNAMSKKYQISPSKEHYGCMIDLLCRAGRLSDAEHMIEAMPFHRDDVV---- 590
Query: 490 WNAIICGLAMHGD 502
W+ ++ +HGD
Sbjct: 591 WSTLLRACRVHGD 603
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 120/562 (21%), Positives = 217/562 (38%), Gaps = 101/562 (17%)
Query: 43 QQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRN 102
Q IH + ESN ++ K G + A+ MFD S D ++ +ISGY+
Sbjct: 39 QNIHFISQTDLPESNKQLKE-----LVKTGHLGNARRMFDKMSQKDEISWTTLISGYVNA 93
Query: 103 DRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVI 162
+ ++A +F ++ + I+ A C +
Sbjct: 94 NDSSEALLLFKNMRVESGLRIDPFILSLAHKACG-------------------------L 128
Query: 163 SSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIV 222
+S V+ G +LHG +K + V + + LL+MY + E R +F EM RN+V
Sbjct: 129 NSDVNYG-----ELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMRNVV 183
Query: 223 SWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDG 282
SW ++ G +AG + EAL + M
Sbjct: 184 SWTAIITGLVRAGYNK-------------------------------EALVYFSEMWRSR 212
Query: 283 IAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLAR 342
+ + + AC + A G +IH+ +K GFD F+ T+ Y CG++
Sbjct: 213 VEYDSYTFAIALKACADSGALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGL 272
Query: 343 LQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNM 402
FE + SW +I ++ G E A Q F M++ D
Sbjct: 273 TLFEKMSMRDVVSWTTIITTLVQMGQEECAVQAFIRMRESD------------------- 313
Query: 403 ALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIID 462
V PNE T +V A+ ++ G H +L+ + + ++ +I+
Sbjct: 314 ------------VSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIMT 361
Query: 463 MYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNS 522
MYAKCG + ++ +F+ + R + W+ II G + G + ++ S + K
Sbjct: 362 MYAKCGQLTSSSVIFHEMTRR--DIVSWSTIIAGYSQGGHVSEAFELLSWMRMEGPKPTE 419
Query: 523 ITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIR 582
VLS C + +++ G++ + S+ +E ++++ + G +E+A +
Sbjct: 420 FALASVLSACGNMAILEHGKQLHAYVLSI-GLEHTAMVLSALINMYCKCGSIEEASRIFD 478
Query: 583 SMPMKADVVIWGTLLAASRIHG 604
+ D+V W ++ HG
Sbjct: 479 AAE-NDDIVSWTAMINGYAEHG 499
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 122/236 (51%), Gaps = 33/236 (13%)
Query: 13 QKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCG 72
+++++ ++Y A V + C+ + G+Q+H+LI GL ++ ++NS++ +YAKCG
Sbjct: 310 RESDVSPNEYTFAAV--ISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAKCG 367
Query: 73 LISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQ 132
++ + +F + D V+ + +I+GY + ++
Sbjct: 368 QLTSSSVIFHEMTRRDIVSWSTIIAGYSQGGHVS-------------------------- 401
Query: 133 NDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVII 192
EA E+ MR+ G P E LASV+S+ ++ + + LH V+ + ++ ++
Sbjct: 402 -----EAFELLSWMRMEGPKPTEFALASVLSACGNMAILEHGKQLHAYVLSIGLEHTAMV 456
Query: 193 STNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIP 248
+ L+NMYC C S+ EA +FD + +IVSW M+NG+A+ G +LFE+IP
Sbjct: 457 LSALINMYCKCGSIEEASRIFDAAENDDIVSWTAMINGYAEHGYSREVIDLFEKIP 512
>gi|297797743|ref|XP_002866756.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312591|gb|EFH43015.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 649
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 164/474 (34%), Positives = 258/474 (54%), Gaps = 9/474 (1%)
Query: 198 NMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGF-------AKAGLVELARELFERIPSK 250
N CS E + + M + ++ + + F + + A+ +F+
Sbjct: 48 NTETRCSKQEELKQIHARMLKTGLIQDSYAITKFLSCCISSTSSDFLPYAQIVFDGFDRP 107
Query: 251 DVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIH 310
D W MI G+ + +L +Y+ MLC N L+ AC A E QIH
Sbjct: 108 DTFLWNLMIRGFSCSDEPERSLLLYQRMLCCSAPHNAYTFPSLLKACSNLSALEETTQIH 167
Query: 311 SIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIE 370
+ I K G++ + ++I+ YAA G LA L F+ K SWN++I G+ + G ++
Sbjct: 168 AQITKLGYENDVYAVNSLINSYAATGNFKLAHLLFDRIPKPDAVSWNSVIKGYAKAGKMD 227
Query: 371 DARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIA 430
A LF M +++ SW+ MISGY Q AL+LFH M ++ V+P+ +++ + A A
Sbjct: 228 IALTLFRKMVEKNAISWTTMISGYVQAGMHKEALQLFHEMQNSDVEPDNVSLANALSACA 287
Query: 431 SSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPW 490
G L++G+W H Y+ I ++ L +IDMYAKCG + A EVF +I+ + SV W
Sbjct: 288 QLGALEQGKWIHSYLTKTRIRMDSVLGCVLIDMYAKCGDMGEALEVFKNIQRK--SVQAW 345
Query: 491 NAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKS 550
A+I G A HG + + +++K IK N ITF VL+ C + GLV+ G+ F +M+
Sbjct: 346 TALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTTVLTACSYTGLVEEGKLIFYNMER 405
Query: 551 VYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGE 610
YN++P ++HYGC+VDLL RAG L++A+ I+ MP+K + VIWG LL A RIH N+E+GE
Sbjct: 406 DYNLKPTIEHYGCVVDLLSRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGE 465
Query: 611 RAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
+ L + P HG V +NI+A +W+ A R+ M++ G+ ++PG S +
Sbjct: 466 EIGEILIAIDPYHGGRYVHKANIHAMGKKWDKAAETRRLMKEQGVAKVPGCSTI 519
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 118/470 (25%), Positives = 206/470 (43%), Gaps = 65/470 (13%)
Query: 43 QQIHSLIFKSGLESNTFIQNSL-INLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIR 101
+QIH+ + K+GL IQ+S I + C + S + S P A I+ G+ R
Sbjct: 60 KQIHARMLKTGL-----IQDSYAITKFLSCCISSTS-------SDFLPYA-QIVFDGFDR 106
Query: 102 NDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASV 161
D + MI GF+ +D +L +++ M N T S+
Sbjct: 107 PDTF----------------LWNLMIRGFSCSDEPERSLLLYQRMLCCSAPHNAYTFPSL 150
Query: 162 ISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNI 221
+ + +L + E +H + KL + V +L+N Y + A LFD + + +
Sbjct: 151 LKACSNLSALEETTQIHAQITKLGYENDVYAVNSLINSYAATGNFKLAHLLFDRIPKPDA 210
Query: 222 VSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCD 281
VSWN ++ G+AKAG +++A LF ++ K+ +SW TMI GY+Q EAL ++ M
Sbjct: 211 VSWNSVIKGYAKAGKMDIALTLFRKMVEKNAISWTTMISGYVQAGMHKEALQLFHEMQNS 270
Query: 282 GIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLA 341
+ P++V + + +SAC + A +G IHS + K + +I YA CG + A
Sbjct: 271 DVEPDNVSLANALSACAQLGALEQGKWIHSYLTKTRIRMDSVLGCVLIDMYAKCGDMGEA 330
Query: 342 RLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPN 401
F+ + + +W ALI+G+ +G +A F MQK
Sbjct: 331 LEVFKNIQRKSVQAWTALISGYAYHGHGREAISKFMEMQK-------------------- 370
Query: 402 MALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLS--AA 459
G+KPN IT +V A + +G ++EG+ Y + L +
Sbjct: 371 -----------MGIKPNVITFTTVLTACSYTGLVEEGKLIF-YNMERDYNLKPTIEHYGC 418
Query: 460 IIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKI 509
++D+ ++ G ++ A + + +V W A++ +H + L +I
Sbjct: 419 VVDLLSRAGLLDEAKRFIQEMPLKPNAVI-WGALLKACRIHKNIELGEEI 467
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 91/367 (24%), Positives = 163/367 (44%), Gaps = 62/367 (16%)
Query: 28 SALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTL 87
S L+ CS A+ + QIH+ I K G E++ + NSLIN YA G A +FD
Sbjct: 149 SLLKACSNLSALEETTQIHAQITKLGYENDVYAVNSLINSYAATGNFKLAHLLFDRIPKP 208
Query: 88 DPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMR 147
D V+ N +I GY + +++ A +F K K +S+T+MI G+ Q +EAL++F +M+
Sbjct: 209 DAVSWNSVIKGYAKAGKMDIALTLFRKMVEKNAISWTTMISGYVQAGMHKEALQLFHEMQ 268
Query: 148 ILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLV 207
V P+ V+LA+ +S+ LG + + + +H + K I ++ L++MY C +
Sbjct: 269 NSDVEPDNVSLANALSACAQLGALEQGKWIHSYLTKTRIRMDSVLGCVLIDMYAKCGDMG 328
Query: 208 EARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVER 267
EA +F ++ +++ +W +++G+A G
Sbjct: 329 EALEVFKNIQRKSVQAWTALISGYAYHG-------------------------------H 357
Query: 268 LSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQAT 327
EA++ + M GI PN + +++AC EG I
Sbjct: 358 GREAISKFMEMQKMGIKPNVITFTTVLTACSYTGLVEEGKLI------------------ 399
Query: 328 IIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ-KRDVYS 386
FY N+ R + +K I + ++ R G++++A++ M K +
Sbjct: 400 ---FY------NMER---DYNLKPTIEHYGCVVDLLSRAGLLDEAKRFIQEMPLKPNAVI 447
Query: 387 WSAMISG 393
W A++
Sbjct: 448 WGALLKA 454
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 134/312 (42%), Gaps = 49/312 (15%)
Query: 16 NLQNSDYE---LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCG 72
+QNSD E ++L +AL C+ A+ QG+ IHS + K+ + ++ + LI++YAKCG
Sbjct: 266 EMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLTKTRIRMDSVLGCVLIDMYAKCG 325
Query: 73 LISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQ 132
+ +A EVF K ++T++I G+A
Sbjct: 326 -------------------------------DMGEALEVFKNIQRKSVQAWTALISGYAY 354
Query: 133 NDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRML-----HGLVIKLMID 187
+ REA+ F +M+ +G+ PN +T +V+++ + G + E +++ +K I+
Sbjct: 355 HGHGREAISKFMEMQKMGIKPNVITFTTVLTACSYTGLVEEGKLIFYNMERDYNLKPTIE 414
Query: 188 GFVIISTNLLNMYCVCSSLVEARSLFDEMK-ERNIVSWNVMLNGFAKAGLVELARELFER 246
+ + +++ L EA+ EM + N V W +L +EL E+ E
Sbjct: 415 HYGCV----VDLLSRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEI 470
Query: 247 IPSKDVVSWGTMIDG---YLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAF 303
+ + D G + + ++ +A R M G+A V IS G F
Sbjct: 471 LIAIDPYHGGRYVHKANIHAMGKKWDKAAETRRLMKEQGVA--KVPGCSTISLEGTTHEF 528
Query: 304 GEGLQIHSIIVK 315
G + H I K
Sbjct: 529 LAGDRSHPEIEK 540
>gi|449448586|ref|XP_004142047.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Cucumis sativus]
Length = 1037
Score = 313 bits (801), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 206/642 (32%), Positives = 318/642 (49%), Gaps = 97/642 (15%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+ + S L C++ A+ +G Q+HS K+G+ ++ ++ SL++LY+KC + A F +
Sbjct: 363 ITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLT 422
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
T + V N+M+ Y + D L+D + E+F
Sbjct: 423 TETENIVLWNVMLVAYGQLDNLSD-------------------------------SFEIF 451
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
R M++ G+IPN+ T S++ + LG ++ +H VIK V + + L++MY
Sbjct: 452 RQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKY 511
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYL 263
L A + + E ++VSW M+ G Y+
Sbjct: 512 GQLALALRILRRLPEDDVVSWTAMIAG-------------------------------YV 540
Query: 264 QVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDF 323
Q + SEAL ++ M GI +++ ISAC A +G QIH+ AGF
Sbjct: 541 QHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLS 600
Query: 324 IQATIIHFYAACGRINLARLQFE-LGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKR 382
I +I YA CGRI A L FE +G K++I SWN+L++G ++G E+A Q+F M +
Sbjct: 601 INNALISLYARCGRIQEAYLAFEKIGDKNNI-SWNSLVSGLAQSGYFEEALQVFVRMLRT 659
Query: 383 DVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAH 442
+ + N T S A AS +K+G+ H
Sbjct: 660 E-------------------------------AEVNMFTYGSAISAAASLANIKQGQQIH 688
Query: 443 EYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGD 502
VL +S ++I +YAK GSI+ A+ F + +R +V WNA+I G + HG
Sbjct: 689 SMVLKTGYDSEREVSNSLISLYAKSGSISDAWREFNDMSER--NVISWNAMITGYSQHGC 746
Query: 503 ANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYG 562
L+++ +++ I N +TF+GVLS C H GLV G YF+SM ++++ P +HY
Sbjct: 747 GMEALRLFEEMKVCGIMPNHVTFVGVLSACSHIGLVKEGLDYFESMFKIHDLVPKSEHYV 806
Query: 563 CMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPS 622
C+VDLLGRAGQL+ A E I+ MP+ AD +IW TLL+A IH N+E+GERAA L L+P
Sbjct: 807 CVVDLLGRAGQLDRAMEYIKEMPIPADAMIWRTLLSACVIHKNIEIGERAAHHLLELEPE 866
Query: 623 HGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
+ VL+SNIYA + +W RK M+D G+K+ PG S +
Sbjct: 867 DSATYVLISNIYAVSRQWIHRDWSRKLMKDRGVKKEPGRSWI 908
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 132/529 (24%), Positives = 238/529 (44%), Gaps = 73/529 (13%)
Query: 77 AKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCW 136
+KS FD +P+ + ++ Y R+ + A +VFD+ + S+ MI F
Sbjct: 85 SKSGFDG----EPLLIDSLVDNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSN 140
Query: 137 REALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNL 196
+ +FR M G+ PN T A V+ + V GG I+ N
Sbjct: 141 FQVFCLFRRMLAEGITPNGYTFAGVLKACV--GG--------------------DIAFNY 178
Query: 197 LNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWG 256
+ V +R+ + +V+ N++++ ++K G +E A+++F I KD+V+W
Sbjct: 179 VKQ-------VHSRTFYYGFDSSPLVA-NLLIDLYSKNGYIESAKKVFNCICMKDIVTWV 230
Query: 257 TMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKA 316
MI G Q EA+ ++ M I P ++ ++SA + F G Q+H +++K
Sbjct: 231 AMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKW 290
Query: 317 GFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLF 376
GF ++ C N L+A + R+ + A ++F
Sbjct: 291 GFHSETYV----------C---------------------NGLVALYSRSRKLISAERIF 319
Query: 377 NNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLK 436
+ M RD S++++ISG Q + ALELF M +KP+ IT+ S+ A AS G L
Sbjct: 320 STMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALH 379
Query: 437 EGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICG 496
+G H + + ++ + L +++D+Y+KC + TA + F + T ++ WN ++
Sbjct: 380 KGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFF--LTTETENIVLWNVMLVA 437
Query: 497 LAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEP 556
+ + + +I+ ++ + N T+ +L TC G + LGE+ V
Sbjct: 438 YGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIH---THVIKTGF 494
Query: 557 DLKHYGC--MVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIH 603
L Y C ++D+ + GQL A ++R +P + DVV W ++A H
Sbjct: 495 QLNVYVCSVLIDMYAKYGQLALALRILRRLP-EDDVVSWTAMIAGYVQH 542
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 83/199 (41%), Gaps = 9/199 (4%)
Query: 404 LELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDM 463
++L + M + GV+ N + + +SG+L E H + + L +++D
Sbjct: 43 IQLMNFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDN 102
Query: 464 YAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSI 523
Y + G + A +VF +R SV WN +I ++ + I N
Sbjct: 103 YFRHGDQHGAVKVFDENSNR--SVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGY 160
Query: 524 TFIGVLSTCCHAGLVDLGERYFKSMKS---VYNVEPDLKHYGCMVDLLGRAGQLEDAEEV 580
TF GVL C D+ Y K + S Y + ++DL + G +E A++V
Sbjct: 161 TFAGVLKACVGG---DIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKV 217
Query: 581 IRSMPMKADVVIWGTLLAA 599
+ MK D+V W +++
Sbjct: 218 FNCICMK-DIVTWVAMISG 235
>gi|449497733|ref|XP_004160501.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g13650-like [Cucumis sativus]
Length = 1037
Score = 313 bits (801), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 206/642 (32%), Positives = 317/642 (49%), Gaps = 97/642 (15%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+ + S L C++ A+ +G Q+HS K+G+ ++ ++ SL++LY+KC + A F
Sbjct: 363 ITVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLX 422
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
T + V N+M+ Y + D L+D + E+F
Sbjct: 423 TETENIVLWNVMLVAYGQLDNLSD-------------------------------SFEIF 451
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
R M++ G+IPN+ T S++ + LG ++ +H VIK V + + L++MY
Sbjct: 452 RQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKY 511
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYL 263
L A + + E ++VSW M+ G Y+
Sbjct: 512 GQLALALRILRRLPEDDVVSWTAMIAG-------------------------------YV 540
Query: 264 QVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDF 323
Q + SEAL ++ M GI +++ ISAC A +G QIH+ AGF
Sbjct: 541 QHDMFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLS 600
Query: 324 IQATIIHFYAACGRINLARLQFE-LGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKR 382
I +I YA CGRI A L FE +G K++I SWN+L++G ++G E+A Q+F M +
Sbjct: 601 INNALISLYARCGRIQEAYLAFEKIGDKNNI-SWNSLVSGLAQSGYFEEALQVFVRMLRT 659
Query: 383 DVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAH 442
+ + N T S A AS +K+G+ H
Sbjct: 660 E-------------------------------AEVNMFTYGSAISAAASLANIKQGQQIH 688
Query: 443 EYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGD 502
VL +S ++I +YAK GSI+ A+ F + +R +V WNA+I G + HG
Sbjct: 689 SMVLKTGYDSEREVSNSLISLYAKSGSISDAWREFNDMSER--NVISWNAMITGYSQHGC 746
Query: 503 ANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYG 562
L+++ +++ I N +TF+GVLS C H GLV G YF+SM ++++ P +HY
Sbjct: 747 GMEALRLFEEMKVCGIMPNHVTFVGVLSACSHIGLVKEGLDYFESMFKIHDLVPKSEHYV 806
Query: 563 CMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPS 622
C+VDLLGRAGQL+ A E I+ MP+ AD +IW TLL+A IH N+E+GERAA L L+P
Sbjct: 807 CVVDLLGRAGQLDRAMEYIKEMPIPADAMIWRTLLSACVIHKNIEIGERAAHHLLELEPE 866
Query: 623 HGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
+ VL+SNIYA + +W RK M+D G+K+ PG S +
Sbjct: 867 DSATYVLISNIYAVSRQWIHRDWSRKLMKDXGVKKEPGRSWI 908
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 132/529 (24%), Positives = 238/529 (44%), Gaps = 73/529 (13%)
Query: 77 AKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCW 136
+KS FD +P+ + ++ Y R+ + A +VFD+ + S+ MI F
Sbjct: 85 SKSGFDG----EPLLIDSLVDNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSN 140
Query: 137 REALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNL 196
+ +FR M G+ PN T A V+ + V GG I+ N
Sbjct: 141 FQVFCLFRRMLAEGITPNGYTFAGVLKACV--GG--------------------DIAFNY 178
Query: 197 LNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWG 256
+ V +R+ + +V+ N++++ ++K G +E A+++F I KD+V+W
Sbjct: 179 VKQ-------VHSRTFYYGFDSSPLVA-NLLIDLYSKNGYIESAKKVFNCICMKDIVTWV 230
Query: 257 TMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKA 316
MI G Q EA+ ++ M I P ++ ++SA + F G Q+H +++K
Sbjct: 231 AMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKW 290
Query: 317 GFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLF 376
GF ++ C N L+A + R+ + A ++F
Sbjct: 291 GFHSETYV----------C---------------------NGLVALYSRSRKLISAERIF 319
Query: 377 NNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLK 436
+ M RD S++++ISG Q + ALELF M +KP+ IT+ S+ A AS G L
Sbjct: 320 STMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALH 379
Query: 437 EGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICG 496
+G H + + ++ + L +++D+Y+KC + TA + F + T ++ WN ++
Sbjct: 380 KGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFF--LXTETENIVLWNVMLVA 437
Query: 497 LAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEP 556
+ + + +I+ ++ + N T+ +L TC G + LGE+ V
Sbjct: 438 YGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIH---THVIKTGF 494
Query: 557 DLKHYGC--MVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIH 603
L Y C ++D+ + GQL A ++R +P + DVV W ++A H
Sbjct: 495 QLNVYVCSVLIDMYAKYGQLALALRILRRLP-EDDVVSWTAMIAGYVQH 542
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 83/199 (41%), Gaps = 9/199 (4%)
Query: 404 LELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDM 463
++L + M + GV+ N + + +SG+L E H + + L +++D
Sbjct: 43 IQLMNFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDN 102
Query: 464 YAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSI 523
Y + G + A +VF +R SV WN +I ++ + I N
Sbjct: 103 YFRHGDQHGAVKVFDENSNR--SVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGY 160
Query: 524 TFIGVLSTCCHAGLVDLGERYFKSMKS---VYNVEPDLKHYGCMVDLLGRAGQLEDAEEV 580
TF GVL C D+ Y K + S Y + ++DL + G +E A++V
Sbjct: 161 TFAGVLKACVGG---DIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKV 217
Query: 581 IRSMPMKADVVIWGTLLAA 599
+ MK D+V W +++
Sbjct: 218 FNCICMK-DIVTWVAMISG 235
>gi|224061246|ref|XP_002300388.1| predicted protein [Populus trichocarpa]
gi|222847646|gb|EEE85193.1| predicted protein [Populus trichocarpa]
Length = 514
Score = 313 bits (801), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 159/383 (41%), Positives = 228/383 (59%), Gaps = 2/383 (0%)
Query: 283 IAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLAR 342
+ P+ ++ AC + G IH + K GF F+Q I++ Y CG + A
Sbjct: 6 VLPDTFTCSFVLKACLKLSDVVNGKTIHGLFQKLGFGSNLFLQNMILNLYGLCGEMGDAM 65
Query: 343 LQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNM 402
L FE + +WN +IA + G I+ A F M ++V SW++MISG+ Q +PN
Sbjct: 66 LLFEKMPQRDAVTWNIVIAQLAKRGDIDGAYGFFLRMPNKNVRSWTSMISGFVQCGKPNE 125
Query: 403 ALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIID 462
A++LF + D V+PNE+T+VSV A A G L GR HEY + N ++ +ID
Sbjct: 126 AIDLFMKLEDEAVRPNEVTVVSVLAACADLGDLDLGRIVHEYSTKSGFKRNVHVCNTLID 185
Query: 463 MYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNS 522
MY KCG + A VFY + +RT V W+A+I GLAMHG A L ++S++ K +K N
Sbjct: 186 MYVKCGCLENARRVFYEMEERT--VVSWSAMIAGLAMHGQAEEALCLFSEMIKLGVKPNG 243
Query: 523 ITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIR 582
+TFIG+L C H GL+D G R+F SM + Y V P ++HYGC+VDL RAG LE+A E I
Sbjct: 244 VTFIGLLHACSHMGLIDEGRRFFASMTADYGVIPQIEHYGCVVDLFSRAGLLEEAHEFIL 303
Query: 583 SMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWED 642
SMP+K + V+WG LL ++H N+++ E A K L+ L P + V++SNIYA+A RWED
Sbjct: 304 SMPIKPNGVVWGALLGGCKVHKNIDLAEEAIKHLSELDPLNDGYYVVISNIYAEAERWED 363
Query: 643 AFSIRKEMRDCGMKRLPGFSGVV 665
A +RK M+D G+K+ G+S +
Sbjct: 364 AARVRKLMKDRGVKKTSGWSSIT 386
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 98/376 (26%), Positives = 181/376 (48%), Gaps = 36/376 (9%)
Query: 146 MRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSS 205
MR+ V+P+ T + V+ + + L + + +HGL KL + + +LN+Y +C
Sbjct: 1 MRLFDVLPDTFTCSFVLKACLKLSDVVNGKTIHGLFQKLGFGSNLFLQNMILNLYGLCGE 60
Query: 206 LVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQV 265
+ +A LF++M +R+ V+WN+++ AK G ++ A F R+P+K+V SW +MI G++Q
Sbjct: 61 MGDAMLLFEKMPQRDAVTWNIVIAQLAKRGDIDGAYGFFLRMPNKNVRSWTSMISGFVQC 120
Query: 266 ERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQ 325
+ +EA+ ++ + + + PN+V +V +++AC G +H K+GF +
Sbjct: 121 GKPNEAIDLFMKLEDEAVRPNEVTVVSVLAACADLGDLDLGRIVHEYSTKSGFKRNVHVC 180
Query: 326 ATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVY 385
T+I Y CG + AR F + + SW+A+IAG +G E+
Sbjct: 181 NTLIDMYVKCGCLENARRVFYEMEERTVVSWSAMIAGLAMHGQAEE-------------- 226
Query: 386 SWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG-RWAHEY 444
AL LF M+ GVKPN +T + + A + G + EG R+
Sbjct: 227 -----------------ALCLFSEMIKLGVKPNGVTFIGLLHACSHMGLIDEGRRFFASM 269
Query: 445 VLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDAN 504
+ + ++D++++ G + A E + + V W A++ G +H + +
Sbjct: 270 TADYGVIPQIEHYGCVVDLFSRAGLLEEAHEFILSMPIKPNGVV-WGALLGGCKVHKNID 328
Query: 505 L---TLKIYSDLEKRN 517
L +K S+L+ N
Sbjct: 329 LAEEAIKHLSELDPLN 344
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 112/393 (28%), Positives = 177/393 (45%), Gaps = 38/393 (9%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
L+ C V G+ IH L K G SN F+QN ++NLY CG + A +F+ D
Sbjct: 17 LKACLKLSDVVNGKTIHGLFQKLGFGSNLFLQNMILNLYGLCGEMGDAMLLFEKMPQRDA 76
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
V NI+I+ + ++ A F + P K S+TSMI GF Q EA+++F +
Sbjct: 77 VTWNIVIAQLAKRGDIDGAYGFFLRMPNKNVRSWTSMISGFVQCGKPNEAIDLFMKLEDE 136
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
V PNEVT+ SV+++ LG + R++H K V + L++MY C L A
Sbjct: 137 AVRPNEVTVVSVLAACADLGDLDLGRIVHEYSTKSGFKRNVHVCNTLIDMYVKCGCLENA 196
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLS 269
R +F EM+ER +VSW+ M+ G A G E
Sbjct: 197 RRVFYEMEERTVVSWSAMIAGLAMHGQAE------------------------------- 225
Query: 270 EALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQ--AT 327
EAL ++ M+ G+ PN V + L+ AC EG + + + A + I+
Sbjct: 226 EALCLFSEMIKLGVKPNGVTFIGLLHACSHMGLIDEGRRFFASMT-ADYGVIPQIEHYGC 284
Query: 328 IIHFYAACGRINLA-RLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYS 386
++ ++ G + A + IK + W AL+ G + I+ A + ++ + D +
Sbjct: 285 VVDLFSRAGLLEEAHEFILSMPIKPNGVVWGALLGGCKVHKNIDLAEEAIKHLSELDPLN 344
Query: 387 --WSAMISG-YAQNEQPNMALELFHGMVDAGVK 416
+ +IS YA+ E+ A + M D GVK
Sbjct: 345 DGYYVVISNIYAEAERWEDAARVRKLMKDRGVK 377
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 117/272 (43%), Gaps = 48/272 (17%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E+ +VS L C+ + G+ +H KSG + N + N+LI++Y KCG
Sbjct: 142 EVTVVSVLAACADLGDLDLGRIVHEYSTKSGFKRNVHVCNTLIDMYVKCGC--------- 192
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
L +AR VF + + VS+++MI G A + EAL +
Sbjct: 193 ----------------------LENARRVFYEMEERTVVSWSAMIAGLAMHGQAEEALCL 230
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRML-------HGLVIKLMIDGFVIISTN 195
F +M LGV PN VT ++ + H+G I E R +G++ ++ G V+
Sbjct: 231 FSEMIKLGVKPNGVTFIGLLHACSHMGLIDEGRRFFASMTADYGVIPQIEHYGCVV---- 286
Query: 196 LLNMYCVCSSLVEARSLFDEMK-ERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVS 254
+++ L EA M + N V W +L G ++LA E + + D ++
Sbjct: 287 --DLFSRAGLLEEAHEFILSMPIKPNGVVWGALLGGCKVHKNIDLAEEAIKHLSELDPLN 344
Query: 255 WGTMI---DGYLQVERLSEALTMYRAMLCDGI 283
G + + Y + ER +A + + M G+
Sbjct: 345 DGYYVVISNIYAEAERWEDAARVRKLMKDRGV 376
>gi|280967731|gb|ACZ98537.1| PPR motif protein [Malus x domestica]
Length = 751
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 192/586 (32%), Positives = 313/586 (53%), Gaps = 72/586 (12%)
Query: 116 PIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECR 175
P + V++ SMI+G+ QN EA+EVF +MR GV P +VTL+S +S+S +LG + + +
Sbjct: 161 PQRNAVAWNSMIVGYVQNGLNEEAIEVFYEMREEGVEPTQVTLSSFLSASANLGALQDGK 220
Query: 176 MLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAG 235
H + + I+ ++TNL SSL+ N ++K G
Sbjct: 221 QGHAIAVICGIE----MTTNL------GSSLI---------------------NFYSKVG 249
Query: 236 LVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLIS 295
L+E A +F R+ KDVV+W +I GY+Q+ + +AL M M + + + V + L+S
Sbjct: 250 LIEDAESVFSRMLEKDVVTWNLLISGYVQIGEVDKALNMCHLMRLENLRFDSVTLATLMS 309
Query: 296 ACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQF---------- 345
A G + H ++ + + ++I+ YA C +I AR F
Sbjct: 310 AFADMRNLKLGKEGHCYCIRNNLESDVVVVSSIVDMYAKCEKIGCARRVFNSSITKDLIL 369
Query: 346 ---------ELG----------------IKDHIASWNALIAGFIRNGMIEDARQLFNNMQ 380
ELG + ++ SWN+LI GF+ +G + +A+ +F MQ
Sbjct: 370 WNTMLAAFAELGHSGEALNLFYQMQLESVPPNVISWNSLILGFLNSGQVNEAKDMFLQMQ 429
Query: 381 ----KRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLK 436
+ ++ +W+ +ISG A++ A+ F M +AGVKPN ++++ V A + +L+
Sbjct: 430 SLGVQPNLVTWTTLISGLARSGFGYEAILTFQRMQEAGVKPNVVSIIGVLLACINLASLQ 489
Query: 437 EGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICG 496
GR H Y++ +S+ L+ ++ +++DMYAKCG + A VF I D+ + +NA+I G
Sbjct: 490 IGRALHGYLIRHSLYLSIPIATSLVDMYAKCGDRDQAKRVFDMIPDKELPI--YNAMISG 547
Query: 497 LAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEP 556
A+HG A L +Y L++ +K ++ITF L C HA +V G F M S +N+ P
Sbjct: 548 FALHGQAVEALALYRCLKEEGLKPDNITFTNALYACSHAMMVSEGLELFVDMVSNHNINP 607
Query: 557 DLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSL 616
++HYGCMV LL R G L++A +I +MP K DV I G+LLAA R H +E+ E + L
Sbjct: 608 SIEHYGCMVSLLSRCGDLDEAFGLISAMPYKPDVQILGSLLAACREHNKIELEEYLSNQL 667
Query: 617 AGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
LQP + + V +SN YA AGRW++ +R+ M++ G++++PG S
Sbjct: 668 LKLQPDNSGNYVAMSNAYAAAGRWDEVKKVRQLMKERGLRKIPGCS 713
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 119/453 (26%), Positives = 220/453 (48%), Gaps = 54/453 (11%)
Query: 38 AVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMIS 97
A+ G+Q H++ G+E T + +SLIN Y+K GLI A+S+F D V N++IS
Sbjct: 215 ALQDGKQGHAIAVICGIEMTTNLGSSLINFYSKVGLIEDAESVFSRMLEKDVVTWNLLIS 274
Query: 98 GYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVT 157
GY++ ++ +AL + MR+ + + VT
Sbjct: 275 GYVQIGEVD-------------------------------KALNMCHLMRLENLRFDSVT 303
Query: 158 LASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMK 217
LA+++S+ + + + H I+ ++ V++ +++++MY C + AR +F+
Sbjct: 304 LATLMSAFADMRNLKLGKEGHCYCIRNNLESDVVVVSSIVDMYAKCEKIGCARRVFNSSI 363
Query: 218 ERNIVSWNVMLNGFAKAGLVELARELF-----ERIPSKDVVSWGTMIDGYLQVERLSEAL 272
++++ WN ML FA+ G A LF E +P +V+SW ++I G+L +++EA
Sbjct: 364 TKDLILWNTMLAAFAELGHSGEALNLFYQMQLESVPP-NVISWNSLILGFLNSGQVNEAK 422
Query: 273 TMYRAMLCDGIAPNDVMIVDLISACGRAMAFG-EGLQIHSIIVKAGFDCYDFIQATIIHF 331
M+ M G+ PN V LIS R+ FG E + + +AG +II
Sbjct: 423 DMFLQMQSLGVQPNLVTWTTLISGLARS-GFGYEAILTFQRMQEAGVKPN---VVSIIGV 478
Query: 332 YAACGRINLARLQFELGIKDH---------IASWNALIAGFIRNGMIEDARQLFNNMQKR 382
AC INLA LQ + + I +L+ + + G + A+++F+ + +
Sbjct: 479 LLAC--INLASLQIGRALHGYLIRHSLYLSIPIATSLVDMYAKCGDRDQAKRVFDMIPDK 536
Query: 383 DVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG-RWA 441
++ ++AMISG+A + Q AL L+ + + G+KP+ IT + A + + + EG
Sbjct: 537 ELPIYNAMISGFALHGQAVEALALYRCLKEEGLKPDNITFTNALYACSHAMMVSEGLELF 596
Query: 442 HEYVLNNSITLNDNLSAAIIDMYAKCGSINTAF 474
+ V N++I + ++ + ++CG ++ AF
Sbjct: 597 VDMVSNHNINPSIEHYGCMVSLLSRCGDLDEAF 629
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 103/428 (24%), Positives = 198/428 (46%), Gaps = 51/428 (11%)
Query: 247 IPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEG 306
+P ++ V+W +MI GY+Q EA+ ++ M +G+ P V + +SA A +G
Sbjct: 160 MPQRNAVAWNSMIVGYVQNGLNEEAIEVFYEMREEGVEPTQVTLSSFLSASANLGALQDG 219
Query: 307 LQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRN 366
Q H+I V G + + +++I+FY+ G I A F ++ + +WN LI+G+++
Sbjct: 220 KQGHAIAVICGIEMTTNLGSSLINFYSKVGLIEDAESVFSRMLEKDVVTWNLLISGYVQI 279
Query: 367 GMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVF 426
G ++ AL + H M ++ + +T+ ++
Sbjct: 280 GEVDK-------------------------------ALNMCHLMRLENLRFDSVTLATLM 308
Query: 427 CAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTS 486
A A LK G+ H Y + N++ + + ++I+DMYAKC I A VF T
Sbjct: 309 SAFADMRNLKLGKEGHCYCIRNNLESDVVVVSSIVDMYAKCEKIGCARRVFN--SSITKD 366
Query: 487 VSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFK 546
+ WN ++ A G + L ++ ++ ++ N I++ ++ ++G V+ + F
Sbjct: 367 LILWNTMLAAFAELGHSGEALNLFYQMQLESVPPNVISWNSLILGFLNSGQVNEAKDMFL 426
Query: 547 SMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMP---MKADVV-IWGTLLAASRI 602
M+S+ V+P+L + ++ L R+G +A + M +K +VV I G LLA +
Sbjct: 427 QMQSL-GVQPNLVTWTTLISGLARSGFGYEAILTFQRMQEAGVKPNVVSIIGVLLACINL 485
Query: 603 HGNVEVGERAAKSLAGLQPSHG-----PSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKR 657
++++G ++L G H P L ++YA G + A + + D K
Sbjct: 486 -ASLQIG----RALHGYLIRHSLYLSIPIATSLVDMYAKCGDRDQAKRVFDMIPD---KE 537
Query: 658 LPGFSGVV 665
LP ++ ++
Sbjct: 538 LPIYNAMI 545
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 91/367 (24%), Positives = 158/367 (43%), Gaps = 64/367 (17%)
Query: 292 DLISACGRAMAFGEGLQIHSIIVKAG--FDCYDFIQATIIHFYAACGRINLARLQFELGI 349
+L+ C A G QIH+ IVK G F ++I+ ++ FYA C + F
Sbjct: 15 ELLQGCVYERALHTGRQIHAQIVKKGAIFAMNEYIETKLVIFYAKCDNPEASNSLFRRVR 74
Query: 350 KDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDV------------------------- 384
++ SW A+I R G ++A F MQ+ +
Sbjct: 75 LKNVFSWAAVIGLNCRKGFYQEALLGFKEMQENGLLPDNFVLPNVLKACGGLEWIRIGKV 134
Query: 385 --------YSW-----------------------SAMISGYAQNEQPNMALELFHGMVDA 413
Y W ++MI GY QN A+E+F+ M +
Sbjct: 135 VHGLVSCGYVWKMWGGGGCKKGVCGMPQRNAVAWNSMIVGYVQNGLNEEAIEVFYEMREE 194
Query: 414 GVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTA 473
GV+P ++T+ S A A+ G L++G+ H + I + NL +++I+ Y+K G I A
Sbjct: 195 GVEPTQVTLSSFLSASANLGALQDGKQGHAIAVICGIEMTTNLGSSLINFYSKVGLIEDA 254
Query: 474 FEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCC 533
VF + ++ V WN +I G G+ + L + + N++ +S+T ++S
Sbjct: 255 ESVFSRMLEK--DVVTWNLLISGYVQIGEVDKALNMCHLMRLENLRFDSVTLATLMSAFA 312
Query: 534 HAGLVDLG-ERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVI 592
+ LG E + +++ N+E D+ +VD+ + ++ A V S K D+++
Sbjct: 313 DMRNLKLGKEGHCYCIRN--NLESDVVVVSSIVDMYAKCEKIGCARRVFNSSITK-DLIL 369
Query: 593 WGTLLAA 599
W T+LAA
Sbjct: 370 WNTMLAA 376
Score = 46.2 bits (108), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 63/144 (43%), Gaps = 31/144 (21%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
++++ L C ++ G+ +H + + L + I SL+++YAKCG QAK +FD
Sbjct: 473 VSIIGVLLACINLASLQIGRALHGYLIRHSLYLSIPIATSLVDMYAKCGDRDQAKRVFD- 531
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
MI P K Y +MI GFA + EAL ++
Sbjct: 532 -----------MI-------------------PDKELPIYNAMISGFALHGQAVEALALY 561
Query: 144 RDMRILGVIPNEVTLASVISSSVH 167
R ++ G+ P+ +T + + + H
Sbjct: 562 RCLKEEGLKPDNITFTNALYACSH 585
>gi|325260820|gb|ADZ04639.1| hypothetical protein [Oryza glaberrima]
Length = 674
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 195/636 (30%), Positives = 320/636 (50%), Gaps = 48/636 (7%)
Query: 62 NSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCV 121
N+L+ Y + G + A+ +FD + D ++ +++ Y L AR VFD P +
Sbjct: 42 NALLTSYGRRGRLRDAQLLFDQMPSRDVISWTALLTAYADGGDLASARLVFDDMPRRNAP 101
Query: 122 SYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHG-- 179
S+ +++ + + R A +F M N V+ ++IS G+ + MLH
Sbjct: 102 SWNALLSVYLRAARPRAAHALFYKMPA----KNAVSYGAIIS------GLAKAEMLHEAE 151
Query: 180 LVIKLMIDGF--VIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLV 237
LV + M + + S L+ Y L A +F+ M R+++SW+ M++G K G V
Sbjct: 152 LVYEEMPWQWRDPVGSNALMAGYLRVGELAMALRVFEGMTVRDVISWSAMVDGLCKHGSV 211
Query: 238 ELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISAC 297
AR +F+ +P ++VVSW +MI GY++ + L ++ M +G+ N + + AC
Sbjct: 212 SEARRVFDAMPERNVVSWTSMIRGYVKRGMCRDGLLLFLNMRREGVQVNTTTLSVALDAC 271
Query: 298 GRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWN 357
A EG+QIH++I+ GF+ F+ +II Y+ G + A+ F+ + I SWN
Sbjct: 272 AVASLAREGIQIHNLIISMGFELDIFLGDSIIIMYSRFGWMVDAKRAFDCMQQKDIVSWN 331
Query: 358 ALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMV------ 411
+LI G++++ M+E+A LF M ++D SW++M+ G+A ++ELF M
Sbjct: 332 SLITGYVQHDMVEEAHVLFKLMHQKDAVSWTSMVVGFANRGWMRESVELFEQMPVKDEVA 391
Query: 412 -------------------------DAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVL 446
G KPN I + A+AS L +GR AH Y +
Sbjct: 392 WTAIISSFITNGDYLSAVRWFCRMSQEGCKPNTIAFSCLLSALASLAMLNQGRQAHAYSI 451
Query: 447 NNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLT 506
N + + +++ MYAKCG + A+ VF I + S+ N++I HG
Sbjct: 452 NMGWVFDSAVHTSLVSMYAKCGRLAEAYHVFSSISN--PSLIAINSMITAFVQHGFVEDA 509
Query: 507 LKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVD 566
LK+++ ++ K N +TF+G+L+ C AG V G YF+SM+ VY VEP+ +HY CMVD
Sbjct: 510 LKLFTKMQNAGYKPNHVTFLGILTGCARAGFVQQGYNYFESMRPVYGVEPNPEHYTCMVD 569
Query: 567 LLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPS 626
LLGRAG L +A E+I SMP W LL+AS +H N+ + AA+ L P +
Sbjct: 570 LLGRAGLLAEALEMINSMPQNDHSDAWAALLSASSLHSNLAFAKIAAQKLLEKDPYDATA 629
Query: 627 RVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
+LS +++ AG ++ ++ + KR PG+S
Sbjct: 630 YTVLSRMFSSAGMEDEEMLKVVQLSNLASKR-PGYS 664
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 97/425 (22%), Positives = 197/425 (46%), Gaps = 57/425 (13%)
Query: 26 LVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCS 85
L AL C+ +G QIH+LI G E + F+ +S+I +Y++ G + AK FD
Sbjct: 264 LSVALDACAVASLAREGIQIHNLIISMGFELDIFLGDSIIIMYSRFGWMVDAKRAFDCMQ 323
Query: 86 TLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRD 145
D V+ N +I+GY+++D + +A +F K VS+TSM++GFA RE++E+F
Sbjct: 324 QKDIVSWNSLITGYVQHDMVEEAHVLFKLMHQKDAVSWTSMVVGFANRGWMRESVELFEQ 383
Query: 146 MRILGVIPNEVTLASVISSSVHLGGI-WECRMLHGLVIKLMIDGFVIISTNLLNMYCVCS 204
M + + ++S I++ +L + W CRM +G N + C+ S
Sbjct: 384 MPVKDEVAWTAIISSFITNGDYLSAVRWFCRMSQ--------EG---CKPNTIAFSCLLS 432
Query: 205 SLVEARSLFDEMKERNIVSWNV-----------MLNGFAKAGLVELARELFERIPSKDVV 253
+L + ++ ++ ++ + S N+ +++ +AK G + A +F I + ++
Sbjct: 433 ALA-SLAMLNQGRQAHAYSINMGWVFDSAVHTSLVSMYAKCGRLAEAYHVFSSISNPSLI 491
Query: 254 SWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSII 313
+ +MI ++Q + +AL ++ M G PN V + +++ C RA
Sbjct: 492 AINSMITAFVQHGFVEDALKLFTKMQNAGYKPNHVTFLGILTGCARAG-----------F 540
Query: 314 VKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDAR 373
V+ G++ ++ ++ G++ + + ++ R G++ +A
Sbjct: 541 VQQGYNYFESMRPV-------------------YGVEPNPEHYTCMVDLLGRAGLLAEAL 581
Query: 374 QLFNNMQKRD-VYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASS 432
++ N+M + D +W+A++S A + N+A P + T +V + SS
Sbjct: 582 EMINSMPQNDHSDAWAALLS--ASSLHSNLAFAKIAAQKLLEKDPYDATAYTVLSRMFSS 639
Query: 433 GTLKE 437
+++
Sbjct: 640 AGMED 644
>gi|357497455|ref|XP_003619016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494031|gb|AES75234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 999
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 194/679 (28%), Positives = 318/679 (46%), Gaps = 134/679 (19%)
Query: 42 GQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIR 101
G+Q+H L+ K G S T++ N+L+ LY++ G +S A+ +F S D V+ N +ISG +
Sbjct: 270 GKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLISGLAQ 329
Query: 102 NDRLNDAREVFDKTPIKC----CVSYTSMI------------------------------ 127
+N A +F K + C CV+ S++
Sbjct: 330 QGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHSYAIKAGMTSDIVV 389
Query: 128 ---------------------MGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSV 166
+ + Q D ++ ++F M+I G++PN+ T S++ +
Sbjct: 390 EGSLLDLYVKCSDIKTAHEFFLCYGQLDNLNKSFQIFTQMQIEGIVPNQFTYPSILKTCT 449
Query: 167 HLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNV 226
LG +H V+K V +S+ L++MY L A +F +KE ++VSW
Sbjct: 450 TLGATDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKHGKLDHALKIFRRLKENDVVSWTA 509
Query: 227 MLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPN 286
M I GY Q ++ +EAL +++ M GI +
Sbjct: 510 M-------------------------------IAGYTQHDKFTEALNLFKEMQDQGIKSD 538
Query: 287 DVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQF- 345
++ ISAC A +G QIH+ +G+ I ++ YA CG++ A F
Sbjct: 539 NIGFASAISACAGIQALDQGRQIHAQSCLSGYSDDLSIGNALVSLYARCGKVREAYAAFD 598
Query: 346 ELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALE 405
++ KD++ SWN+L++GF ++G E+A +F M K
Sbjct: 599 QIYAKDNV-SWNSLVSGFAQSGYFEEALNIFAQMNK------------------------ 633
Query: 406 LFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYA 465
AG++ N T S A A+ ++ G+ H + +S A+I +YA
Sbjct: 634 -------AGLEINSFTFGSAVSAAANIANVRIGKQIHGMIRKTGYDSETEVSNALITLYA 686
Query: 466 KCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITF 525
KCG+I+ WN++I G + HG LK++ D+++ ++ N +TF
Sbjct: 687 KCGTIDDI---------------SWNSMITGYSQHGCGFEALKLFEDMKQLDVLPNHVTF 731
Query: 526 IGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMP 585
+GVLS C H GLVD G YF+SM +N+ P +HY C+VDLLGR+G L A+ + MP
Sbjct: 732 VGVLSACSHVGLVDEGISYFRSMSEAHNLVPKPEHYACVVDLLGRSGLLSRAKRFVEEMP 791
Query: 586 MKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFS 645
++ D ++W TLL+A +H N+++GE AA L L+P + VL+SN+YA +G+W+
Sbjct: 792 IQPDAMVWRTLLSACNVHKNIDIGEFAASHLLELEPKDSATYVLVSNMYAVSGKWDCRDR 851
Query: 646 IRKEMRDCGMKRLPGFSGV 664
R+ M+D G+K+ PG S V
Sbjct: 852 TRQMMKDRGVKKEPGRSWV 870
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 139/632 (21%), Positives = 257/632 (40%), Gaps = 151/632 (23%)
Query: 30 LRYCSAH-IAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLD 88
LR CS + ++ +QIH+ SG ES+TFI
Sbjct: 170 LRGCSGNAVSFRFVEQIHAKTITSGFESSTFI---------------------------- 201
Query: 89 PVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRI 148
CN +I Y +N L+ A++VF+ + VS+ +MI G +QN EA+ +F +
Sbjct: 202 ---CNPLIDLYFKNGFLSSAKKVFENLKARDSVSWVAMISGLSQNGYEEEAMLLFCQI-- 256
Query: 149 LGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVE 208
V+S+ + + LHGLV+K + L+ +Y +L
Sbjct: 257 ------------VLSACTKVEFFEFGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSS 304
Query: 209 ARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFER---------------------- 246
A +F M +R+ VS+N +++G A+ G + A LF++
Sbjct: 305 AEQIFHCMSQRDRVSYNSLISGLAQQGYINRALALFKKMNLDCQKPDCVTVASLLSACAS 364
Query: 247 ---IP--------------SKDVVSWGTMIDGYL----------------QVERLSEALT 273
+P + D+V G+++D Y+ Q++ L+++
Sbjct: 365 VGALPNGKQFHSYAIKAGMTSDIVVEGSLLDLYVKCSDIKTAHEFFLCYGQLDNLNKSFQ 424
Query: 274 MYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYA 333
++ M +GI PN ++ C A G QIH+ ++K GF ++ + +I YA
Sbjct: 425 IFTQMQIEGIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVSSVLIDMYA 484
Query: 334 ACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISG 393
G+++ A F ++ + SW A+IAG+ ++ +A LF MQ
Sbjct: 485 KHGKLDHALKIFRRLKENDVVSWTAMIAGYTQHDKFTEALNLFKEMQ------------- 531
Query: 394 YAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLN 453
D G+K + I S A A L +GR H + + +
Sbjct: 532 ------------------DQGIKSDNIGFASAISACAGIQALDQGRQIHAQSCLSGYSDD 573
Query: 454 DNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDL 513
++ A++ +YA+CG + A+ F I + WN+++ G A G L I++ +
Sbjct: 574 LSIGNALVSLYARCGKVREAYAAFDQIYAKDN--VSWNSLVSGFAQSGYFEEALNIFAQM 631
Query: 514 EKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSM-KSVYNVEPDLKHYGCMVDLLGRAG 572
K +++NS TF +S + V +G++ + K+ Y+ E ++ + ++ L + G
Sbjct: 632 NKAGLEINSFTFGSAVSAAANIANVRIGKQIHGMIRKTGYDSETEVSN--ALITLYAKCG 689
Query: 573 QLEDAEEVIRSMPMKADVVIWGTLLAASRIHG 604
++D + W +++ HG
Sbjct: 690 TIDD--------------ISWNSMITGYSQHG 707
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 121/510 (23%), Positives = 218/510 (42%), Gaps = 96/510 (18%)
Query: 95 MISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPN 154
+I Y+ LN A VFD+ PI+ CW F R++G +P
Sbjct: 103 LIDFYLAFGDLNCAVNVFDEMPIRSL-------------SCWNRIFNTFIAERLMGRVPG 149
Query: 155 EVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFD 214
+++ +V +L G S N ++ V + A+++
Sbjct: 150 --LFRRMLTKNVEFDERIFAVVLRG------------CSGNAVSFRFV--EQIHAKTITS 193
Query: 215 EMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTM 274
+ + N +++ + K G + A+++FE + ++D VSW MI G Q EA+ +
Sbjct: 194 GFESSTFIC-NPLIDLYFKNGFLSSAKKVFENLKARDSVSWVAMISGLSQNGYEEEAMLL 252
Query: 275 YRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAA 334
+ ++ +SAC + F G Q+H +++K GF ++
Sbjct: 253 FCQIV--------------LSACTKVEFFEFGKQLHGLVLKQGFSSETYV---------- 288
Query: 335 CGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGY 394
C NAL+ + R+G + A Q+F+ M +RD S++++ISG
Sbjct: 289 C---------------------NALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLISGL 327
Query: 395 AQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLND 454
AQ N AL LF M KP+ +T+ S+ A AS G L G+ H Y + +T +
Sbjct: 328 AQQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHSYAIKAGMTSDI 387
Query: 455 NLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLE 514
+ +++D+Y KC I TA E F +C + N + +I++ ++
Sbjct: 388 VVEGSLLDLYVKCSDIKTAHEFF----------------LC-YGQLDNLNKSFQIFTQMQ 430
Query: 515 KRNIKLNSITFIGVLSTCCHAGLVDLGER-YFKSMKSVYNVEPDLKHYGCMVDLLGRAGQ 573
I N T+ +L TC G DLGE+ + + +K+ + + ++D+ + G+
Sbjct: 431 IEGIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVS--SVLIDMYAKHGK 488
Query: 574 LEDAEEVIRSMPMKADVVIWGTLLAASRIH 603
L+ A ++ R + + DVV W ++A H
Sbjct: 489 LDHALKIFRRLK-ENDVVSWTAMIAGYTQH 517
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 113/486 (23%), Positives = 194/486 (39%), Gaps = 131/486 (26%)
Query: 8 SVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINL 67
++F + Q D + + S L C++ A+ G+Q HS K+G+ S+ ++ SL++L
Sbjct: 338 ALFKKMNLDCQKPDC-VTVASLLSACASVGALPNGKQFHSYAIKAGMTSDIVVEGSLLDL 396
Query: 68 YAKCGLISQAKSMF-----------------------------------DSCSTLDPV-- 90
Y KC I A F +C+TL
Sbjct: 397 YVKCSDIKTAHEFFLCYGQLDNLNKSFQIFTQMQIEGIVPNQFTYPSILKTCTTLGATDL 456
Query: 91 ------------------ACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQ 132
+++I Y ++ +L+ A ++F + VS+T+MI G+ Q
Sbjct: 457 GEQIHTQVLKTGFQFNVYVSSVLIDMYAKHGKLDHALKIFRRLKENDVVSWTAMIAGYTQ 516
Query: 133 NDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVII 192
+D + EAL +F++M+ G+ + + AS IS+ + + + R +H + I
Sbjct: 517 HDKFTEALNLFKEMQDQGIKSDNIGFASAISACAGIQALDQGRQIHAQSCLSGYSDDLSI 576
Query: 193 STNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDV 252
L+++Y C + EA + FD++ ++ VSWN +++GFA++G E
Sbjct: 577 GNALVSLYARCGKVREAYAAFDQIYAKDNVSWNSLVSGFAQSGYFE-------------- 622
Query: 253 VSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSI 312
EAL ++ M G+ N +SA G QIH +
Sbjct: 623 -----------------EALNIFAQMNKAGLEINSFTFGSAVSAAANIANVRIGKQIHGM 665
Query: 313 IVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDA 372
I K G+D + +I YA CG I D I SWN++I G+ ++G +A
Sbjct: 666 IRKTGYDSETEVSNALITLYAKCGTI------------DDI-SWNSMITGYSQHGCGFEA 712
Query: 373 RQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASS 432
+LF +M++ DV PN +T V V A +
Sbjct: 713 LKLFEDMKQLDVL-------------------------------PNHVTFVGVLSACSHV 741
Query: 433 GTLKEG 438
G + EG
Sbjct: 742 GLVDEG 747
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 130/298 (43%), Gaps = 55/298 (18%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+ SA+ C+ A+ QG+QIH+ SG + I N+L++LYA+CG + +A + FD
Sbjct: 540 IGFASAISACAGIQALDQGRQIHAQSCLSGYSDDLSIGNALVSLYARCGKVREAYAAFDQ 599
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
D V+ N ++S GFAQ+ + EAL +F
Sbjct: 600 IYAKDNVSWNSLVS-------------------------------GFAQSGYFEEALNIF 628
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
M G+ N T S +S++ ++ + + +HG++ K D +S L+ +Y C
Sbjct: 629 AQMNKAGLEINSFTFGSAVSAAANIANVRIGKQIHGMIRKTGYDSETEVSNALITLYAKC 688
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYL 263
++ + +SWN M+ G+++ G A +LFE + DV+ G L
Sbjct: 689 GTIDD-------------ISWNSMITGYSQHGCGFEALKLFEDMKQLDVLPNHVTFVGVL 735
Query: 264 ----QVERLSEALTMYRAML-CDGIAPND---VMIVDLISACG---RAMAFGEGLQIH 310
V + E ++ +R+M + P +VDL+ G RA F E + I
Sbjct: 736 SACSHVGLVDEGISYFRSMSEAHNLVPKPEHYACVVDLLGRSGLLSRAKRFVEEMPIQ 793
>gi|449449649|ref|XP_004142577.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Cucumis sativus]
Length = 589
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 169/422 (40%), Positives = 247/422 (58%), Gaps = 4/422 (0%)
Query: 243 LFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMA 302
LF++IP V + I + + +Y M G +PN L AC
Sbjct: 38 LFDQIPKPSVYLYNKFIQTFSSIGHPHRCWLLYCQMCSQGCSPNQYSFTFLFPACASLFN 97
Query: 303 FGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQF-ELGIKDHIASWNALIA 361
G +HS K+GF F ++ YA G + AR F E+ ++D I +WN+LIA
Sbjct: 98 VYPGQMLHSHFCKSGFASDMFAMTALLDMYAKLGMLRSARQLFDEMPVRD-IPTWNSLIA 156
Query: 362 GFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMV-DAGVKPNEI 420
G+ R+G +E A +LFN M R+V SW+A+ISGYAQN + ALE+F G+ + G KPNE+
Sbjct: 157 GYARSGHMEAALELFNKMPVRNVISWTALISGYAQNGKYAKALEMFIGLENEKGTKPNEV 216
Query: 421 TMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHI 480
++ SV A + G L G+ Y NN N +S A+++++A+CG+I A +VF I
Sbjct: 217 SIASVLPACSQLGALDIGKRIEAYARNNGFFKNAYVSNAVLELHARCGNIEEAQQVFDEI 276
Query: 481 RDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDL 540
+ S WN +I GLA+HG L++Y + R ++ + +TF+G+L C H G+V
Sbjct: 277 GSKRNLCS-WNTMIMGLAVHGRCIDALQLYDQMLIRKMRPDDVTFVGLLLACTHGGMVAE 335
Query: 541 GERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAAS 600
G + F+SM+S + V P L+HYGC+VDLLGRAG+L++A +I++MPM D VIWGTLL A
Sbjct: 336 GRQLFESMESKFQVAPKLEHYGCLVDLLGRAGELQEAYNLIQNMPMAPDSVIWGTLLGAC 395
Query: 601 RIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPG 660
HGNVE+GE AA+SL L+P + + V+LSNIYA AG W +RK M+ + + G
Sbjct: 396 SFHGNVELGEVAAESLFKLEPWNPGNYVILSNIYALAGDWSGVARLRKMMKGGHITKRAG 455
Query: 661 FS 662
+S
Sbjct: 456 YS 457
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 117/475 (24%), Positives = 203/475 (42%), Gaps = 80/475 (16%)
Query: 39 VSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISG 98
++Q +QIH+ ++GL+ F+ L+ L P AC +
Sbjct: 1 MNQLKQIHAYSLRNGLDHTKFLIEKLLQLPDL------------------PYACTL---- 38
Query: 99 YIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFA----QNDCWREALEVFRDMRILGVIPN 154
FD+ P Y I F+ + CW ++ M G PN
Sbjct: 39 -------------FDQIPKPSVYLYNKFIQTFSSIGHPHRCWL----LYCQMCSQGCSPN 81
Query: 155 EVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFD 214
+ + + + L ++ +MLH K + T LL+MY L AR LFD
Sbjct: 82 QYSFTFLFPACASLFNVYPGQMLHSHFCKSGFASDMFAMTALLDMYAKLGMLRSARQLFD 141
Query: 215 EMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTM 274
EM R+I +WN ++ G+A++G +E A ELF ++P ++V+SW +I GY Q + ++AL M
Sbjct: 142 EMPVRDIPTWNSLIAGYARSGHMEAALELFNKMPVRNVISWTALISGYAQNGKYAKALEM 201
Query: 275 YRAMLCD-GIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYA 333
+ + + G PN+V I ++ AC + A G +I + GF ++ ++ +A
Sbjct: 202 FIGLENEKGTKPNEVSIASVLPACSQLGALDIGKRIEAYARNNGFFKNAYVSNAVLELHA 261
Query: 334 ACGRINLARLQF-ELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMIS 392
CG I A+ F E+G K ++ SWN +I G +G DA QL++ M R
Sbjct: 262 RCGNIEEAQQVFDEIGSKRNLCSWNTMIMGLAVHGRCIDALQLYDQMLIRK--------- 312
Query: 393 GYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITL 452
++P+++T V + A G + EGR E + + +
Sbjct: 313 ----------------------MRPDDVTFVGLLLACTHGGMVAEGRQLFE-SMESKFQV 349
Query: 453 NDNLS--AAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANL 505
L ++D+ + G + A+ + ++ SV W ++ + HG+ L
Sbjct: 350 APKLEHYGCLVDLLGRAGELQEAYNLIQNMPMAPDSVI-WGTLLGACSFHGNVEL 403
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 86/282 (30%), Positives = 141/282 (50%), Gaps = 39/282 (13%)
Query: 33 CSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVAC 92
C++ V GQ +HS KSG S+ F +L+++YAK G++ A+ +FD D
Sbjct: 92 CASLFNVYPGQMLHSHFCKSGFASDMFAMTALLDMYAKLGMLRSARQLFDEMPVRDIPTW 151
Query: 93 NIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMR-ILGV 151
N +I+GY R+ + A E+F+K P++ +S+T++I G+AQN + +ALE+F + G
Sbjct: 152 NSLIAGYARSGHMEAALELFNKMPVRNVISWTALISGYAQNGKYAKALEMFIGLENEKGT 211
Query: 152 IPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGF---VIISTNLLNMYCVCSSLVE 208
PNEV++ASV+ + LG + + + +GF +S +L ++ C ++ E
Sbjct: 212 KPNEVSIASVLPACSQLGALDIGKRIEAYARN---NGFFKNAYVSNAVLELHARCGNIEE 268
Query: 209 ARSLFDEM-KERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVER 267
A+ +FDE+ +RN+ SWN M+ G A G R
Sbjct: 269 AQQVFDEIGSKRNLCSWNTMIMGLAVHG-------------------------------R 297
Query: 268 LSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQI 309
+AL +Y ML + P+DV V L+ AC EG Q+
Sbjct: 298 CIDALQLYDQMLIRKMRPDDVTFVGLLLACTHGGMVAEGRQL 339
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 101/232 (43%), Gaps = 36/232 (15%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E+++ S L CS A+ G++I + +G N ++ N+++ L+A+CG I +A+ +FD
Sbjct: 215 EVSIASVLPACSQLGALDIGKRIEAYARNNGFFKNAYVSNAVLELHARCGNIEEAQQVFD 274
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
G RN S+ +MIMG A + +AL++
Sbjct: 275 EI-------------GSKRN-----------------LCSWNTMIMGLAVHGRCIDALQL 304
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRML-HGLVIKLMIDGFVIISTNLLNMYC 201
+ M I + P++VT ++ + H G + E R L + K + + L+++
Sbjct: 305 YDQMLIRKMRPDDVTFVGLLLACTHGGMVAEGRQLFESMESKFQVAPKLEHYGCLVDLLG 364
Query: 202 VCSSLVEARSLFDEMK-ERNIVSWNVMLNGFAKAGLVEL----ARELFERIP 248
L EA +L M + V W +L + G VEL A LF+ P
Sbjct: 365 RAGELQEAYNLIQNMPMAPDSVIWGTLLGACSFHGNVELGEVAAESLFKLEP 416
>gi|15239745|ref|NP_199702.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170778|sp|Q9FI80.1|PP425_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g48910
gi|10177180|dbj|BAB10314.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|15810559|gb|AAL07167.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|332008359|gb|AED95742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 646
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 164/443 (37%), Positives = 256/443 (57%), Gaps = 19/443 (4%)
Query: 237 VELARELFERIPSKDVVSWGTMIDGYLQVERLSE--ALTMYRAMLCDG-IAPNDVMIVDL 293
++ A ++F ++P ++ SW T+I G+ + + A+T++ M+ D + PN +
Sbjct: 75 LDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSV 134
Query: 294 ISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGI--KD 351
+ AC + EG QIH + +K GF +F+ + ++ Y CG + AR+ F I KD
Sbjct: 135 LKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKD 194
Query: 352 ------------HIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQ 399
I WN +I G++R G + AR LF+ M++R V SW+ MISGY+ N
Sbjct: 195 MVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGF 254
Query: 400 PNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAA 459
A+E+F M ++PN +T+VSV AI+ G+L+ G W H Y ++ I ++D L +A
Sbjct: 255 FKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSA 314
Query: 460 IIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIK 519
+IDMY+KCG I A VF + +V W+A+I G A+HG A + + + + ++
Sbjct: 315 LIDMYSKCGIIEKAIHVFERLP--RENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVR 372
Query: 520 LNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEE 579
+ + +I +L+ C H GLV+ G RYF M SV +EP ++HYGCMVDLLGR+G L++AEE
Sbjct: 373 PSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEE 432
Query: 580 VIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGR 639
I +MP+K D VIW LL A R+ GNVE+G+R A L + P + V LSN+YA G
Sbjct: 433 FILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGN 492
Query: 640 WEDAFSIRKEMRDCGMKRLPGFS 662
W + +R M++ +++ PG S
Sbjct: 493 WSEVSEMRLRMKEKDIRKDPGCS 515
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 118/484 (24%), Positives = 220/484 (45%), Gaps = 77/484 (15%)
Query: 44 QIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRND 103
QIH++ KSG +T ++ C+T D + +
Sbjct: 41 QIHAVFIKSGQMRDTLAAAEILRF----------------CATSD-----------LHHR 73
Query: 104 RLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWRE--ALEVFRDMRILGVI-PNEVTLAS 160
L+ A ++F++ P + C S+ ++I GF+++D + A+ +F +M + PN T S
Sbjct: 74 DLDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPS 133
Query: 161 VISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLF------- 213
V+ + G I E + +HGL +K G + +NL+ MY +C + +AR LF
Sbjct: 134 VLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEK 193
Query: 214 -----DEMKERN--IVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVE 266
+ ++R+ IV WNVM++G+ + G + AR LF+++ + VVSW TMI GY
Sbjct: 194 DMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNG 253
Query: 267 RLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQA 326
+A+ ++R M I PN V +V ++ A R + G +H +G D + +
Sbjct: 254 FFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGS 313
Query: 327 TIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYS 386
+I Y+ CG I A FE ++++ +W+A+I GF +G DA F M++
Sbjct: 314 ALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQ----- 368
Query: 387 WSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG-RWAHEYV 445
AGV+P+++ +++ A + G ++EG R+ + V
Sbjct: 369 --------------------------AGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMV 402
Query: 446 LNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANL 505
+ + ++D+ + G ++ A E ++ + V W A++ M G+ +
Sbjct: 403 SVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVI-WKALLGACRMQGNVEM 461
Query: 506 TLKI 509
++
Sbjct: 462 GKRV 465
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 102/392 (26%), Positives = 175/392 (44%), Gaps = 60/392 (15%)
Query: 28 SALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMF------ 81
S L+ C+ + +G+QIH L K G + F+ ++L+ +Y CG + A+ +F
Sbjct: 133 SVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIE 192
Query: 82 -DSCSTLDP-------VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQN 133
D D V N+MI GY+R AR +FDK + VS+ +MI G++ N
Sbjct: 193 KDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLN 252
Query: 134 DCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIIS 193
+++A+EVFR+M+ + PN VTL SV+ + LG + LH I ++
Sbjct: 253 GFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLG 312
Query: 194 TNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVV 253
+ L++MY C + +A +F+ + N+++W+ M+NGFA G
Sbjct: 313 SALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQA---------------- 356
Query: 254 SWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSII 313
G ID + ++ + G+ P+DV ++L++AC EG + S +
Sbjct: 357 --GDAIDCFCKMRQA-------------GVRPSDVAYINLLTACSHGGLVEEGRRYFSQM 401
Query: 314 VKAGFDCYDFIQATIIHF---YAACGRINL----ARLQFELGIKDHIASWNALIAGFIRN 366
V D ++ I H+ GR L + IK W AL+
Sbjct: 402 VSV-----DGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQ 456
Query: 367 GMIEDARQLFN---NMQKRDVYSWSAMISGYA 395
G +E +++ N +M D ++ A+ + YA
Sbjct: 457 GNVEMGKRVANILMDMVPHDSGAYVALSNMYA 488
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 102/244 (41%), Gaps = 46/244 (18%)
Query: 8 SVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINL 67
VF K +Y + LVS L S ++ G+ +H SG+ + + ++LI++
Sbjct: 260 EVFREMKKGDIRPNY-VTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDM 318
Query: 68 YAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMI 127
Y+KCG+I +A VF++ P + +++++MI
Sbjct: 319 YSKCGIIEKAI-------------------------------HVFERLPRENVITWSAMI 347
Query: 128 MGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMID 187
GFA + +A++ F MR GV P++V +++++ H G + E R ++ +D
Sbjct: 348 NGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVS--VD 405
Query: 188 GFVIISTNLLNMYCVCSSLVEARSLFDEMKE--------RNIVSWNVMLNGFAKAGLVEL 239
G + Y L+ L DE +E + V W +L G VE+
Sbjct: 406 GL----EPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGNVEM 461
Query: 240 AREL 243
+ +
Sbjct: 462 GKRV 465
>gi|449528479|ref|XP_004171232.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04750,
mitochondrial-like [Cucumis sativus]
Length = 586
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 185/550 (33%), Positives = 292/550 (53%), Gaps = 38/550 (6%)
Query: 115 TPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWEC 174
TP + +MI+GF ++ +A ++R M G P+ T ++ ++ + E
Sbjct: 27 TPYPNLYIFNTMILGFPFSN--EKAFTIYRSMLQNGTYPDRQTFLYLLQTTKFVA---EV 81
Query: 175 RMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKA 234
+ +H C +LV F + + + N ++ +
Sbjct: 82 KQIH------------------------CHALV-----FGLLSKEEYLR-NSLIKRYVDN 111
Query: 235 GLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLI 294
G E AR+LF+ + ++VVS+ TMI G+ +V + L ++ M G+ P+D ++ L+
Sbjct: 112 GCFECARQLFDEMSDRNVVSYNTMILGFAKVGNILGILELFHDMRSHGLEPDDFTMLGLL 171
Query: 295 SACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIA 354
CG+ G +H+ I K+ + ++ Y C + LAR F+ ++
Sbjct: 172 LLCGQLGETKLGKSVHAQIEKSIGSSNLILYNALLDMYVKCNELKLARKVFDGPMEKDTV 231
Query: 355 SWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAG 414
SWN +IAG+ + G +E A LFN + RD+ SW+++ISGYAQN LF M
Sbjct: 232 SWNTIIAGYAKVGELELACDLFNQIPTRDIVSWNSLISGYAQNGDYVTVKCLFTRMFAEN 291
Query: 415 VKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAF 474
VKP+++T+V++ A+A G L +GRW H + + +A+IDMY KCGSI AF
Sbjct: 292 VKPDKVTIVNLISAVAEMGALDQGRWIHGLAVKMLTKIEAFSGSALIDMYCKCGSIERAF 351
Query: 475 EVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCH 534
+F I ++ V+ W +I G A HG N L+++S ++ K N +TF+ VL+ C H
Sbjct: 352 VIFNQIPEK--DVTTWTTMITGFAFHGFGNKALELFSVMQAET-KPNDVTFVSVLAACSH 408
Query: 535 AGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWG 594
+GLVD G + F SMK Y++EP ++HYGC+VDLL R+G+L DA VI MPM+ IWG
Sbjct: 409 SGLVDEGLKIFSSMKKRYSIEPGVEHYGCLVDLLCRSGRLLDAIGVIEKMPMEPSRSIWG 468
Query: 595 TLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCG 654
+L+A R+H N+E+ ERA L L+P +LLSN+YA GRW + SIR+ M G
Sbjct: 469 AVLSACRMHRNMELAERALMELLKLEPEKEGGYILLSNVYATCGRWSYSDSIREVMNSRG 528
Query: 655 MKRLPGFSGV 664
+K++ G S V
Sbjct: 529 VKKIAGCSSV 538
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 133/476 (27%), Positives = 218/476 (45%), Gaps = 44/476 (9%)
Query: 49 IFKSGLESNTFI-QNSLINLYAKCGLISQAKSMFDSCSTL-------DPVACNIMISGYI 100
I++S L++ T+ + + + L +++ K + C L + N +I Y+
Sbjct: 52 IYRSMLQNGTYPDRQTFLYLLQTTKFVAEVKQI--HCHALVFGLLSKEEYLRNSLIKRYV 109
Query: 101 RNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLAS 160
N AR++FD+ + VSY +MI+GFA+ LE+F DMR G+ P++ T+
Sbjct: 110 DNGCFECARQLFDEMSDRNVVSYNTMILGFAKVGNILGILELFHDMRSHGLEPDDFTMLG 169
Query: 161 VISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERN 220
++ LG + +H + K + +I+ LL+MY C+ L AR +FD E++
Sbjct: 170 LLLLCGQLGETKLGKSVHAQIEKSIGSSNLILYNALLDMYVKCNELKLARKVFDGPMEKD 229
Query: 221 IVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLC 280
VSWN ++ G+AK G +ELA +LF +IP++D+VSW ++I GY Q ++ M
Sbjct: 230 TVSWNTIIAGYAKVGELELACDLFNQIPTRDIVSWNSLISGYAQNGDYVTVKCLFTRMFA 289
Query: 281 DGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINL 340
+ + P+ V IV+LISA A +G IH + VK F + +I Y CG I
Sbjct: 290 ENVKPDKVTIVNLISAVAEMGALDQGRWIHGLAVKMLTKIEAFSGSALIDMYCKCGSIER 349
Query: 341 ARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQP 400
A + F + + +W +I GF +G A +LF+ MQ
Sbjct: 350 AFVIFNQIPEKDVTTWTTMITGFAFHGFGNKALELFSVMQ-------------------- 389
Query: 401 NMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG-RWAHEYVLNNSITLNDNLSAA 459
A KPN++T VSV A + SG + EG + SI
Sbjct: 390 ------------AETKPNDVTFVSVLAACSHSGLVDEGLKIFSSMKKRYSIEPGVEHYGC 437
Query: 460 IIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEK 515
++D+ + G + A V + S S W A++ MH + L + +L K
Sbjct: 438 LVDLLCRSGRLLDAIGVIEKM-PMEPSRSIWGAVLSACRMHRNMELAERALMELLK 492
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 139/274 (50%), Gaps = 32/274 (11%)
Query: 42 GQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIR 101
G+ +H+ I KS SN + N+L+++Y KC + A+ +FD D V+ N +I+GY +
Sbjct: 183 GKSVHAQIEKSIGSSNLILYNALLDMYVKCNELKLARKVFDGPMEKDTVSWNTIIAGYAK 242
Query: 102 NDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASV 161
L A ++F++ P + VS+ S+I G+AQN + +F M V P++VT+ ++
Sbjct: 243 VGELELACDLFNQIPTRDIVSWNSLISGYAQNGDYVTVKCLFTRMFAENVKPDKVTIVNL 302
Query: 162 ISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNI 221
IS+ +G + + R +HGL +K++ + L++MYC C S+ A +F+++ E+++
Sbjct: 303 ISAVAEMGALDQGRWIHGLAVKMLTKIEAFSGSALIDMYCKCGSIERAFVIFNQIPEKDV 362
Query: 222 VSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCD 281
+W M+ GFA G A ELF +Q E
Sbjct: 363 TTWTTMITGFAFHGFGNKALELF----------------SVMQAE--------------- 391
Query: 282 GIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVK 315
PNDV V +++AC + EGL+I S + K
Sbjct: 392 -TKPNDVTFVSVLAACSHSGLVDEGLKIFSSMKK 424
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 96/430 (22%), Positives = 172/430 (40%), Gaps = 72/430 (16%)
Query: 237 VELARELFERI-PSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLIS 295
+ELA LF P ++ + TMI G+ +A T+YR+ML +G P+ + L+
Sbjct: 16 LELAILLFNHFTPYPNLYIFNTMILGFPFSNE--KAFTIYRSMLQNGTYPDRQTFLYLLQ 73
Query: 296 ACGRAMAFGEGLQIH-SIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIA 354
E QIH +V ++++ ++I Y G AR F+ ++
Sbjct: 74 TTKFV---AEVKQIHCHALVFGLLSKEEYLRNSLIKRYVDNGCFECARQLFDEMSDRNVV 130
Query: 355 SWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAG 414
S+N +I GF + G I LELFH M G
Sbjct: 131 SYNTMILGFAKVGNILG-------------------------------ILELFHDMRSHG 159
Query: 415 VKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAF 474
++P++ TM+ + G K G+ H + + + N L A++DMY KC + A
Sbjct: 160 LEPDDFTMLGLLLLCGQLGETKLGKSVHAQIEKSIGSSNLILYNALLDMYVKCNELKLAR 219
Query: 475 EVFYHIRDR-----------------------------TTSVSPWNAIICGLAMHGDANL 505
+VF ++ T + WN++I G A +GD
Sbjct: 220 KVFDGPMEKDTVSWNTIIAGYAKVGELELACDLFNQIPTRDIVSWNSLISGYAQNGDYVT 279
Query: 506 TLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMV 565
+++ + N+K + +T + ++S G +D G R+ + + + ++
Sbjct: 280 VKCLFTRMFAENVKPDKVTIVNLISAVAEMGALDQG-RWIHGLAVKMLTKIEAFSGSALI 338
Query: 566 DLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGP 625
D+ + G +E A + +P K DV W T++ HG G +A + + +Q P
Sbjct: 339 DMYCKCGSIERAFVIFNQIPEK-DVTTWTTMITGFAFHG---FGNKALELFSVMQAETKP 394
Query: 626 SRVLLSNIYA 635
+ V ++ A
Sbjct: 395 NDVTFVSVLA 404
>gi|357519003|ref|XP_003629790.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523812|gb|AET04266.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 908
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 194/624 (31%), Positives = 308/624 (49%), Gaps = 96/624 (15%)
Query: 39 VSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISG 98
V + +++H + K G SNT + NSLI Y K G + A ++FD S D V+ N MI+G
Sbjct: 211 VKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMING 270
Query: 99 YIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTL 158
+ N GF+ N LE+F M ILGV + TL
Sbjct: 271 CVVN--------------------------GFSGN-----GLEIFIQMLILGVEVDLTTL 299
Query: 159 ASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKE 218
SV+ + ++G + R LHG +K V+ S LL+MY C +L
Sbjct: 300 VSVLVACANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNL------------ 347
Query: 219 RNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAM 278
NG A E+F ++ +VSW ++I Y++ S+A+ ++ M
Sbjct: 348 ----------NG---------ATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEM 388
Query: 279 LCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRI 338
G+ P+ + ++ AC + + +G +HS ++K G + +I+ YA CG
Sbjct: 389 QSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGS- 447
Query: 339 NLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNE 398
+E+AR +F+ + +D+ SW+ MI GY+QN
Sbjct: 448 ------------------------------VEEARLVFSKIPVKDIVSWNTMIGGYSQNL 477
Query: 399 QPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSA 458
PN ALELF M KP++ITM V A A L +GR H ++L + +++
Sbjct: 478 LPNEALELFLDM-QKQFKPDDITMACVLPACAGLAALDKGREIHGHILRRGYFSDLHVAC 536
Query: 459 AIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNI 518
A++DMYAKCG + A +F I + + W +I G MHG N + ++++ I
Sbjct: 537 ALVDMYAKCGLLVLAQLLFDMIPKK--DLISWTVMIAGYGMHGFGNEAISTFNEMRIAGI 594
Query: 519 KLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAE 578
+ + +F +L+ C H+GL++ G ++F SM++ VEP L+HY C+VDLL R G L A
Sbjct: 595 EPDESSFSAILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYACVVDLLARMGNLSKAY 654
Query: 579 EVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAG 638
+ I SMP+K D IWG LL+ RIH +V++ E+ A+ + L+P + V+L+N+YA+A
Sbjct: 655 KFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHIFELEPDNTRYYVVLANVYAEAE 714
Query: 639 RWEDAFSIRKEMRDCGMKRLPGFS 662
+WE+ +RK M+ G K+ PG S
Sbjct: 715 KWEEVKKLRKRMQKRGFKQNPGCS 738
>gi|147833266|emb|CAN77478.1| hypothetical protein VITISV_013730 [Vitis vinifera]
Length = 1009
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 203/682 (29%), Positives = 339/682 (49%), Gaps = 62/682 (9%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
L+ CSA + G+ +H + + +ES+ F+ N+LI+ Y+ CG + ++S+F S D
Sbjct: 190 LKACSAMLLXRIGKMVHGFVIRKSVESDVFVGNALIHFYSNCGDLGSSRSVFHSMQERDV 249
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCC----VSYTSMIMGFAQN------------ 133
V+ +IS Y+ ++A+ +F + +S+++++ GFA+N
Sbjct: 250 VSWTALISAYMEEGLXDEAKHIFHLMQLDGVKPDLISWSALLSGFARNGEIDLALETLEE 309
Query: 134 ----------DCW-------------REALEVFRDMRILGVIPNEVTLASVISSSVHLGG 170
+ W +AL++F M PN +T+AS++ + L
Sbjct: 310 MPERGLQPTVNSWNGIISGCVQNGYLEDALDMFSRMLWYPEDPNIITIASILPACTGLKA 369
Query: 171 IWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNG 230
+ + +H + K I G V + ++++MY C S A +F + + +N WN M+
Sbjct: 370 LRLGKAIHXIAXKHGIVGNVYVEGSVIDMYSKCGSYDYAEKVFXKAENKNTAMWNEMIAA 429
Query: 231 FAKAGLVELARELFERIPS----KDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPN 286
+ G VE A L + DV+++ T++ G+ + ++A + M+ G+ PN
Sbjct: 430 YVNEGKVEDALGLLRSMQKDGWKPDVITYNTILSGHARNGLKTQAXELLSEMVQMGLKPN 489
Query: 287 DVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDC---------YDFIQATIIHFYAACGR 337
V LIS ++ E L++ I+ C TI AC
Sbjct: 490 VVSFNVLISGFQQSGLSYEALKVFRIMQSPSDGCNPNEVLNLSMRPNPITITGALPACAD 549
Query: 338 INLARLQFEL-------GIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAM 390
+NL E+ G + +I +AL+ + + ++ A ++F + R+ SW+A+
Sbjct: 550 LNLWCQGKEIHGYTLRNGFEPNIFVSSALVDMYAKCHDMDSANKVFFRIDGRNTVSWNAL 609
Query: 391 ISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSI 450
++GY N+QP AL+LF M+ G++P+ IT + +F A ++ GR H Y +
Sbjct: 610 MAGYINNKQPEEALKLFLEMLGEGLQPSSITFMILFPACGDIAAIRFGRGLHGYAAKCQL 669
Query: 451 -TLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKI 509
L + + +A+IDMYAKCGSI A VF + V WNA+I ++HG A +
Sbjct: 670 DELKNAIXSALIDMYAKCGSILDAKSVF--DSEVEKDVPLWNAMISAFSVHGMARNAFAV 727
Query: 510 YSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLG 569
+ +E I + ITF+ +LS C GLV+ G +YF SM+ Y V L+HY CMV +LG
Sbjct: 728 FXQMELLGIXPDHITFVSLLSACARDGLVEEGWKYFNSMEISYGVAATLEHYTCMVGILG 787
Query: 570 RAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVL 629
AG L++A + IR MP D +W TLL A R+H N E+GERAAK+L L+P + + +L
Sbjct: 788 GAGLLDEALDFIRQMPYPPDACMWATLLQACRVHSNPEIGERAAKALFELEPDNATNYML 847
Query: 630 LSNIYADAGRWEDAFSIRKEMR 651
LSNIY +G W+ A ++R MR
Sbjct: 848 LSNIYVSSGMWDFAKNLRSFMR 869
Score = 222 bits (566), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 169/666 (25%), Positives = 290/666 (43%), Gaps = 102/666 (15%)
Query: 56 SNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVAC-----NIMISGYIRND-RLNDAR 109
S T I +S I+L +C +S+ + + L+ + N ++ Y +N L DAR
Sbjct: 79 SPTEISDS-ISLLNRCSTLSEFRQIHARVVKLNALKWKSSIGNKLVVLYCKNQWSLEDAR 137
Query: 110 EVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLG 169
++ D+ P + +Y ++I + +++ W E FR M G++P++ + +++ + +
Sbjct: 138 KLLDEIPNRTVPAYAALIRSYCRSEQWDELFSXFRLMVYEGMLPDKYLVPTILKACSAML 197
Query: 170 GIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIV------- 222
+M+HG VI+ ++ V + L++ Y C L +RS+F M+ER++V
Sbjct: 198 LXRIGKMVHGFVIRKSVESDVFVGNALIHFYSNCGDLGSSRSVFHSMQERDVVSWTALIS 257
Query: 223 ----------------------------SWNVMLNGFAKAGLVELARELFERIPSK---- 250
SW+ +L+GFA+ G ++LA E E +P +
Sbjct: 258 AYMEEGLXDEAKHIFHLMQLDGVKPDLISWSALLSGFARNGEIDLALETLEEMPERGLQP 317
Query: 251 DVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIH 310
V SW +I G +Q L +AL M+ ML PN + I ++ AC A G IH
Sbjct: 318 TVNSWNGIISGCVQNGYLEDALDMFSRMLWYPEDPNIITIASILPACTGLKALRLGKAIH 377
Query: 311 SIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIE 370
I K G +++ ++I Y+ CG + A F + A WN +IA ++ G +E
Sbjct: 378 XIAXKHGIVGNVYVEGSVIDMYSKCGSYDYAEKVFXKAENKNTAMWNEMIAAYVNEGKVE 437
Query: 371 DARQLFNNMQ----KRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVK---------- 416
DA L +MQ K DV +++ ++SG+A+N A EL MV G+K
Sbjct: 438 DALGLLRSMQKDGWKPDVITYNTILSGHARNGLKTQAXELLSEMVQMGLKPNVVSFNVLI 497
Query: 417 -------------------------------------PNEITMVSVFCAIASSGTLKEGR 439
PN IT+ A A +G+
Sbjct: 498 SGFQQSGLSYEALKVFRIMQSPSDGCNPNEVLNLSMRPNPITITGALPACADLNLWCQGK 557
Query: 440 WAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAM 499
H Y L N N +S+A++DMYAKC +++A +VF+ I R T VS WNA++ G
Sbjct: 558 EIHGYTLRNGFEPNIFVSSALVDMYAKCHDMDSANKVFFRIDGRNT-VS-WNALMAGYIN 615
Query: 500 HGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLK 559
+ LK++ ++ ++ +SITF+ + C + G E
Sbjct: 616 NKQPEEALKLFLEMLGEGLQPSSITFMILFPACGDIAAIRFGRGLHGYAAKCQLDELKNA 675
Query: 560 HYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVE--VGERAAKSLA 617
++D+ + G + DA+ V S ++ DV +W +++A +HG L
Sbjct: 676 IXSALIDMYAKCGSILDAKSVFDS-EVEKDVPLWNAMISAFSVHGMARNAFAVFXQMELL 734
Query: 618 GLQPSH 623
G+ P H
Sbjct: 735 GIXPDH 740
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 112/473 (23%), Positives = 190/473 (40%), Gaps = 119/473 (25%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+ + S L C+ A+ G+ IH + K G+ N +++ S+I++Y+KCG A+ +F
Sbjct: 355 ITIASILPACTGLKALRLGKAIHXIAXKHGIVGNVYVEGSVIDMYSKCGSYDYAEKVFXK 414
Query: 84 CSTLDPVACNIMISGYIRNDRLNDA----------------------------------- 108
+ N MI+ Y+ ++ DA
Sbjct: 415 AENKNTAMWNEMIAAYVNEGKVEDALGLLRSMQKDGWKPDVITYNTILSGHARNGLKTQA 474
Query: 109 ----REVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRI------------LGVI 152
E+ VS+ +I GF Q+ EAL+VFR M+ L +
Sbjct: 475 XELLSEMVQMGLKPNVVSFNVLISGFQQSGLSYEALKVFRIMQSPSDGCNPNEVLNLSMR 534
Query: 153 PNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSL 212
PN +T+ + + L + + +HG ++ + + +S+ L++MY C + A +
Sbjct: 535 PNPITITGALPACADLNLWCQGKEIHGYTLRNGFEPNIFVSSALVDMYAKCHDMDSANKV 594
Query: 213 FDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEAL 272
F + RN VSWN ++ GY+ ++ EAL
Sbjct: 595 FFRIDGRNTVSWNALMA-------------------------------GYINNKQPEEAL 623
Query: 273 TMYRAMLCDGIAPNDVMIVDLISACG--RAMAFGEGLQIHSIIVKAGFD-CYDFIQATII 329
++ ML +G+ P+ + + L ACG A+ FG GL H K D + I + +I
Sbjct: 624 KLFLEMLGEGLQPSSITFMILFPACGDIAAIRFGRGL--HGYAAKCQLDELKNAIXSALI 681
Query: 330 HFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSA 389
YA CG I A+ F+ ++ + WNA+I+ F +GM +A +F M
Sbjct: 682 DMYAKCGSILDAKSVFDSEVEKDVPLWNAMISAFSVHGMARNAFAVFXQM---------- 731
Query: 390 MISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAH 442
EL G+ P+ IT VS+ A A G ++EG W +
Sbjct: 732 ---------------ELL------GIXPDHITFVSLLSACARDGLVEEG-WKY 762
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 141/330 (42%), Gaps = 70/330 (21%)
Query: 16 NLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLIS 75
NL + + AL C+ QG++IH ++G E N F+ ++L+++YAKC +
Sbjct: 530 NLSMRPNPITITGALPACADLNLWCQGKEIHGYTLRNGFEPNIFVSSALVDMYAKCHDMD 589
Query: 76 QAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDC 135
A +F + V+ N +++GYI N K P
Sbjct: 590 SANKVFFRIDGRNTVSWNALMAGYINN-----------KQP------------------- 619
Query: 136 WREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFV-IIST 194
EAL++F +M G+ P+ +T + + + I R LHG K +D I +
Sbjct: 620 -EEALKLFLEMLGEGLQPSSITFMILFPACGDIAAIRFGRGLHGYAAKCQLDELKNAIXS 678
Query: 195 NLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVS 254
L++MY C S+++A+S+FD E+++ WN M++ F+ G+ A +F
Sbjct: 679 ALIDMYAKCGSILDAKSVFDSEVEKDVPLWNAMISAFSVHGMARNAFAVF---------- 728
Query: 255 WGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQ-IHSII 313
Q+E L GI P+ + V L+SAC R EG + +S+
Sbjct: 729 --------XQMELL-------------GIXPDHITFVSLLSACARDGLVEEGWKYFNSME 767
Query: 314 VKAGFDCYDFIQATIIHFYAACGRINLARL 343
+ G + AT+ H+ G + A L
Sbjct: 768 ISYG------VAATLEHYTCMVGILGGAGL 791
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/352 (21%), Positives = 155/352 (44%), Gaps = 45/352 (12%)
Query: 290 IVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGI 349
I D IS R E QIH+ +VK +N + + +G
Sbjct: 83 ISDSISLLNRCSTLSEFRQIHARVVK----------------------LNALKWKSSIG- 119
Query: 350 KDHIASWNALIAGFIRNGM-IEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFH 408
N L+ + +N +EDAR+L + + R V +++A+I Y ++EQ + F
Sbjct: 120 -------NKLVVLYCKNQWSLEDARKLLDEIPNRTVPAYAALIRSYCRSEQWDELFSXFR 172
Query: 409 GMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCG 468
MV G+ P++ + ++ A ++ + G+ H +V+ S+ + + A+I Y+ CG
Sbjct: 173 LMVYEGMLPDKYLVPTILKACSAMLLXRIGKMVHGFVIRKSVESDVFVGNALIHFYSNCG 232
Query: 469 SINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGV 528
+ ++ VF+ +++R V W A+I G + I+ ++ +K + I++ +
Sbjct: 233 DLGSSRSVFHSMQER--DVVSWTALISAYMEEGLXDEAKHIFHLMQLDGVKPDLISWSAL 290
Query: 529 LSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSM---P 585
LS G +DL + M ++P + + ++ + G LEDA ++ M P
Sbjct: 291 LSGFARNGEIDLALETLEEMPE-RGLQPTVNSWNGIISGCVQNGYLEDALDMFSRMLWYP 349
Query: 586 MKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADA 637
+++ ++L A + +G K++ + HG ++ N+Y +
Sbjct: 350 EDPNIITIASILPACTGLKALRLG----KAIHXIAXKHG----IVGNVYVEG 393
>gi|359472776|ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 896
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 200/631 (31%), Positives = 315/631 (49%), Gaps = 91/631 (14%)
Query: 42 GQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIR 101
G+Q+H + G + TF N+L+ +YAK G + +K++F+S D V+ N MIS + +
Sbjct: 216 GKQLHGYSLRVG-DQKTFTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQ 274
Query: 102 NDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASV 161
+DR + EAL FR M + GV + VT+ASV
Sbjct: 275 SDRFS-------------------------------EALAFFRLMVLEGVELDGVTIASV 303
Query: 162 ISSSVHLGGIWECRMLHGLVIK---LMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKE 218
+ + HL + + +H V++ L+ + FV + L++MYC C + R +FD +
Sbjct: 304 LPACSHLERLDVGKEIHAYVLRNNDLIENSFV--GSALVDMYCNCRQVESGRRVFDHILG 361
Query: 219 RNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAM 278
R I WN M++G+A+ GL E A LF +E + A
Sbjct: 362 RRIELWNAMISGYARNGLDEKALILF--------------------IEMIKVA------- 394
Query: 279 LCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRI 338
G+ PN + ++ AC AF IH VK GF ++Q ++ Y+ G++
Sbjct: 395 ---GLLPNTTTMASVMPACVHCEAFSNKESIHGYAVKLGFKEDRYVQNALMDMYSRMGKM 451
Query: 339 NLARLQFE-LGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQN 397
+++ F+ + ++D + SWN +I G++ +G +A L + MQ+ + +
Sbjct: 452 DISETIFDSMEVRDRV-SWNTMITGYVLSGRYSNALVLLHEMQRMENTKDVKKDDNDDEK 510
Query: 398 EQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLS 457
P KPN IT+++V A+ + +G+ H Y + N + + +
Sbjct: 511 GGP--------------YKPNAITLMTVLPGCAALAAIAKGKEIHAYAIRNMLASDITVG 556
Query: 458 AAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKR- 516
+A++DMYAKCG +N + VF + ++ +V WN +I MHG L+++ ++
Sbjct: 557 SALVDMYAKCGCLNLSRRVFNEMPNK--NVITWNVLIMACGMHGKGEEALELFKNMVAEA 614
Query: 517 ----NIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAG 572
K N +TFI V + C H+GL+ G F MK + VEP HY C+VDLLGRAG
Sbjct: 615 GRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDHGVEPTSDHYACVVDLLGRAG 674
Query: 573 QLEDAEEVIRSMPMKADVV-IWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLS 631
QLE+A E++ +MP + D V W +LL A RIH NVE+GE AAK+L L+P+ VLLS
Sbjct: 675 QLEEAYELVNTMPAEFDKVGAWSSLLGACRIHQNVELGEVAAKNLLHLEPNVASHYVLLS 734
Query: 632 NIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
NIY+ AG W A +RK MR G+K+ PG S
Sbjct: 735 NIYSSAGLWNKAMEVRKNMRQMGVKKEPGCS 765
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 154/646 (23%), Positives = 268/646 (41%), Gaps = 144/646 (22%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTF-IQNSLINLYAKCGLISQAKSMFD 82
A + L+ S + G+QIH+ K G S++ + N+L+N+Y KCG I D
Sbjct: 93 FAFPAVLKAVSGLQDLKTGEQIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIG------D 146
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
C +VFD+ + VS+ S I + + W +ALE
Sbjct: 147 VC-------------------------KVFDRITDRDQVSWNSFIAALCRFEKWEQALEA 181
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLG---GIWECRMLHGLVIKLMIDGFVIISTNLLNM 199
FR M++ + + TL SV + +LG G+ + LHG +++ D + L+ M
Sbjct: 182 FRAMQMENMELSSFTLVSVALACSNLGVMHGLRLGKQLHGYSLRVG-DQKTFTNNALMAM 240
Query: 200 YCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMI 259
Y + ++++LF+ +R++VSWN M++ F+
Sbjct: 241 YAKLGRVDDSKALFESFVDRDMVSWNTMISSFS--------------------------- 273
Query: 260 DGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFD 319
Q +R SEAL +R M+ +G+ + V I ++ AC G +IH+ +++ D
Sbjct: 274 ----QSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNN-D 328
Query: 320 CYD--FIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFN 377
+ F+ + ++ Y C ++ R F+ + I WNA+I+G+ RNG+ E A LF
Sbjct: 329 LIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYARNGLDEKALILFI 388
Query: 378 NMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKE 437
M K AG+ PN TM SV A
Sbjct: 389 EMIKV------------------------------AGLLPNTTTMASVMPACVHCEAFSN 418
Query: 438 GRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVF--YHIRDRTTSVSPWNAIIC 495
H Y + + + A++DMY++ G ++ + +F +RDR + WN +I
Sbjct: 419 KESIHGYAVKLGFKEDRYVQNALMDMYSRMGKMDISETIFDSMEVRDRVS----WNTMIT 474
Query: 496 GLAMHGDANLTLKIYSDLEKRN-----------------IKLNSITFIGVLSTCCHAGLV 538
G + G + L + ++++ K N+IT + VL C +
Sbjct: 475 GYVLSGRYSNALVLLHEMQRMENTKDVKKDDNDDEKGGPYKPNAITLMTVLPGCAALAAI 534
Query: 539 DLG-ERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLL 597
G E + +++++ + D+ +VD+ + G L + V MP K +V+ W L+
Sbjct: 535 AKGKEIHAYAIRNM--LASDITVGSALVDMYAKCGCLNLSRRVFNEMPNK-NVITWNVLI 591
Query: 598 AASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDA 643
A +HG GE A + L N+ A+AGR +A
Sbjct: 592 MACGMHGK---GEEALE--------------LFKNMVAEAGRGGEA 620
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 103/225 (45%), Gaps = 15/225 (6%)
Query: 382 RDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWA 441
R SW + ++ A+ + M +G +P+ +V A++ LK G
Sbjct: 55 RSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGEQI 114
Query: 442 HEYVL-----NNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICG 496
H + ++S+T+ + L ++MY KCG I +VF I DR VS WN+ I
Sbjct: 115 HAAAVKFGYGSSSVTVANTL----VNMYGKCGGIGDVCKVFDRITDR-DQVS-WNSFIAA 168
Query: 497 LAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEP 556
L L+ + ++ N++L+S T + V C + G++ G R K +
Sbjct: 169 LCRFEKWEQALEAFRAMQMENMELSSFTLVSVALACSNLGVMH-GLRLGKQLHGYSLRVG 227
Query: 557 DLKHY--GCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAA 599
D K + ++ + + G+++D++ + S + D+V W T++++
Sbjct: 228 DQKTFTNNALMAMYAKLGRVDDSKALFESF-VDRDMVSWNTMISS 271
>gi|449443225|ref|XP_004139380.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04750,
mitochondrial-like [Cucumis sativus]
Length = 651
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 185/550 (33%), Positives = 292/550 (53%), Gaps = 38/550 (6%)
Query: 115 TPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWEC 174
TP + +MI+GF ++ +A ++R M G P+ T ++ ++ + E
Sbjct: 92 TPYPNLYIFNTMILGFPFSN--EKAFTIYRSMLQNGTYPDRQTFLYLLQTTKFVA---EV 146
Query: 175 RMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKA 234
+ +H C +LV F + + + N ++ +
Sbjct: 147 KQIH------------------------CHALV-----FGLLSKEEYLR-NSLIKRYVDN 176
Query: 235 GLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLI 294
G E AR+LF+ + ++VVS+ TMI G+ +V + L ++ M G+ P+D ++ L+
Sbjct: 177 GCFECARQLFDEMSDRNVVSYNTMILGFAKVGNILGILELFHDMRSHGLEPDDFTMLGLL 236
Query: 295 SACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIA 354
CG+ G +H+ I K+ + ++ Y C + LAR F+ ++
Sbjct: 237 LLCGQLGETKLGKSVHAQIEKSIGSSNLILYNALLDMYVKCNELKLARKVFDGPMEKDTV 296
Query: 355 SWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAG 414
SWN +IAG+ + G +E A LFN + RD+ SW+++ISGYAQN LF M
Sbjct: 297 SWNTIIAGYAKVGELELACDLFNQIPTRDIVSWNSLISGYAQNGDYVTVKCLFTRMFAEN 356
Query: 415 VKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAF 474
VKP+++T+V++ A+A G L +GRW H + + +A+IDMY KCGSI AF
Sbjct: 357 VKPDKVTIVNLISAVAEMGALDQGRWIHGLAVKMLTKIEAFSGSALIDMYCKCGSIERAF 416
Query: 475 EVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCH 534
+F I ++ V+ W +I G A HG N L+++S ++ K N +TF+ VL+ C H
Sbjct: 417 VIFNQIPEK--DVTTWTTMITGFAFHGFGNKALELFSVMQAET-KPNDVTFVSVLAACSH 473
Query: 535 AGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWG 594
+GLVD G + F SMK Y++EP ++HYGC+VDLL R+G+L DA VI MPM+ IWG
Sbjct: 474 SGLVDEGLKIFSSMKKRYSIEPGVEHYGCLVDLLCRSGRLLDAIGVIEKMPMEPSRSIWG 533
Query: 595 TLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCG 654
+L+A R+H N+E+ ERA L L+P +LLSN+YA GRW + SIR+ M G
Sbjct: 534 AVLSACRMHRNMELAERALMELLKLEPEKEGGYILLSNVYATCGRWSYSDSIREVMNSRG 593
Query: 655 MKRLPGFSGV 664
+K++ G S V
Sbjct: 594 VKKIAGCSSV 603
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 133/476 (27%), Positives = 218/476 (45%), Gaps = 44/476 (9%)
Query: 49 IFKSGLESNTFI-QNSLINLYAKCGLISQAKSMFDSCSTL-------DPVACNIMISGYI 100
I++S L++ T+ + + + L +++ K + C L + N +I Y+
Sbjct: 117 IYRSMLQNGTYPDRQTFLYLLQTTKFVAEVKQI--HCHALVFGLLSKEEYLRNSLIKRYV 174
Query: 101 RNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLAS 160
N AR++FD+ + VSY +MI+GFA+ LE+F DMR G+ P++ T+
Sbjct: 175 DNGCFECARQLFDEMSDRNVVSYNTMILGFAKVGNILGILELFHDMRSHGLEPDDFTMLG 234
Query: 161 VISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERN 220
++ LG + +H + K + +I+ LL+MY C+ L AR +FD E++
Sbjct: 235 LLLLCGQLGETKLGKSVHAQIEKSIGSSNLILYNALLDMYVKCNELKLARKVFDGPMEKD 294
Query: 221 IVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLC 280
VSWN ++ G+AK G +ELA +LF +IP++D+VSW ++I GY Q ++ M
Sbjct: 295 TVSWNTIIAGYAKVGELELACDLFNQIPTRDIVSWNSLISGYAQNGDYVTVKCLFTRMFA 354
Query: 281 DGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINL 340
+ + P+ V IV+LISA A +G IH + VK F + +I Y CG I
Sbjct: 355 ENVKPDKVTIVNLISAVAEMGALDQGRWIHGLAVKMLTKIEAFSGSALIDMYCKCGSIER 414
Query: 341 ARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQP 400
A + F + + +W +I GF +G A +LF+ MQ
Sbjct: 415 AFVIFNQIPEKDVTTWTTMITGFAFHGFGNKALELFSVMQ-------------------- 454
Query: 401 NMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG-RWAHEYVLNNSITLNDNLSAA 459
A KPN++T VSV A + SG + EG + SI
Sbjct: 455 ------------AETKPNDVTFVSVLAACSHSGLVDEGLKIFSSMKKRYSIEPGVEHYGC 502
Query: 460 IIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEK 515
++D+ + G + A V + S S W A++ MH + L + +L K
Sbjct: 503 LVDLLCRSGRLLDAIGVIEKM-PMEPSRSIWGAVLSACRMHRNMELAERALMELLK 557
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 139/274 (50%), Gaps = 32/274 (11%)
Query: 42 GQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIR 101
G+ +H+ I KS SN + N+L+++Y KC + A+ +FD D V+ N +I+GY +
Sbjct: 248 GKSVHAQIEKSIGSSNLILYNALLDMYVKCNELKLARKVFDGPMEKDTVSWNTIIAGYAK 307
Query: 102 NDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASV 161
L A ++F++ P + VS+ S+I G+AQN + +F M V P++VT+ ++
Sbjct: 308 VGELELACDLFNQIPTRDIVSWNSLISGYAQNGDYVTVKCLFTRMFAENVKPDKVTIVNL 367
Query: 162 ISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNI 221
IS+ +G + + R +HGL +K++ + L++MYC C S+ A +F+++ E+++
Sbjct: 368 ISAVAEMGALDQGRWIHGLAVKMLTKIEAFSGSALIDMYCKCGSIERAFVIFNQIPEKDV 427
Query: 222 VSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCD 281
+W M+ GFA G A ELF +Q E
Sbjct: 428 TTWTTMITGFAFHGFGNKALELF----------------SVMQAE--------------- 456
Query: 282 GIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVK 315
PNDV V +++AC + EGL+I S + K
Sbjct: 457 -TKPNDVTFVSVLAACSHSGLVDEGLKIFSSMKK 489
Score = 95.5 bits (236), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 101/470 (21%), Positives = 185/470 (39%), Gaps = 78/470 (16%)
Query: 203 CSSLVEARSLFDEMKERNIVSWN------VMLNGFAKAGLVELARELFERI-PSKDVVSW 255
C+S + + + M N+V + + + +ELA LF P ++ +
Sbjct: 41 CNSRTQFKQILGHMMRNNLVGQTFPMSRLLFFSAVSHPENLELAILLFNHFTPYPNLYIF 100
Query: 256 GTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIH-SIIV 314
TMI G+ +A T+YR+ML +G P+ + L+ E QIH +V
Sbjct: 101 NTMILGFPFSNE--KAFTIYRSMLQNGTYPDRQTFLYLLQT---TKFVAEVKQIHCHALV 155
Query: 315 KAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQ 374
++++ ++I Y G AR F+ ++ S+N +I GF + G I
Sbjct: 156 FGLLSKEEYLRNSLIKRYVDNGCFECARQLFDEMSDRNVVSYNTMILGFAKVGNILG--- 212
Query: 375 LFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGT 434
LELFH M G++P++ TM+ + G
Sbjct: 213 ----------------------------ILELFHDMRSHGLEPDDFTMLGLLLLCGQLGE 244
Query: 435 LKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDR----------- 483
K G+ H + + + N L A++DMY KC + A +VF ++
Sbjct: 245 TKLGKSVHAQIEKSIGSSNLILYNALLDMYVKCNELKLARKVFDGPMEKDTVSWNTIIAG 304
Query: 484 ------------------TTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITF 525
T + WN++I G A +GD +++ + N+K + +T
Sbjct: 305 YAKVGELELACDLFNQIPTRDIVSWNSLISGYAQNGDYVTVKCLFTRMFAENVKPDKVTI 364
Query: 526 IGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMP 585
+ ++S G +D G R+ + + + ++D+ + G +E A + +P
Sbjct: 365 VNLISAVAEMGALDQG-RWIHGLAVKMLTKIEAFSGSALIDMYCKCGSIERAFVIFNQIP 423
Query: 586 MKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYA 635
K DV W T++ HG G +A + + +Q P+ V ++ A
Sbjct: 424 EK-DVTTWTTMITGFAFHG---FGNKALELFSVMQAETKPNDVTFVSVLA 469
>gi|357453927|ref|XP_003597244.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355486292|gb|AES67495.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 678
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 182/555 (32%), Positives = 275/555 (49%), Gaps = 65/555 (11%)
Query: 111 VFDKTPIKC-CVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLG 169
VF KTP Y +MI G D + A+ ++ M ++P+ T + V+ + L
Sbjct: 59 VFHKTPTNSNTFLYNTMIRGMVSKDRFNNAVHLYASMHKAAIVPDSFTFSFVLKACARLN 118
Query: 170 GIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLN 229
M+H LV K D V + TN++ Y C L +A +FD+
Sbjct: 119 LFHLGVMIHSLVFKTGFDCDVFVKTNVVCFYSKCGFLRDAWKVFDD-------------- 164
Query: 230 GFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVM 289
+ K+VVSW MI G ++ + EA+ ++R +L G+ P+ +
Sbjct: 165 -----------------MVVKNVVSWTGMICGCIEFGKFREAVDLFRGLLESGLRPDGFV 207
Query: 290 IVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGI 349
IV ++ AC R G I + + G F+ +++ Y CG +
Sbjct: 208 IVRVLRACARLGDLESGRWIDRCMRECGLSRNVFVATSLVDMYTKCGSM----------- 256
Query: 350 KDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHG 409
E+AR +F+ M ++D+ WSAMI GYA N P A+ELF
Sbjct: 257 --------------------EEARFVFDGMVEKDIVCWSAMIQGYASNGLPREAIELFFE 296
Query: 410 MVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGS 469
M V+P+ MV + AS G L+ G WA + N L ++ID YAKCGS
Sbjct: 297 MRKVNVRPDCYAMVGALSSCASLGALELGNWAKGLMNYEEFLSNPVLGTSLIDFYAKCGS 356
Query: 470 INTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVL 529
+ A V+ ++++ V +NA+I GLAM+G ++ + K I N TF+G+L
Sbjct: 357 MEEALGVYKMMKEKDRVV--FNAVISGLAMYGQVGAAFGVFGQMGKFGIPPNEHTFVGLL 414
Query: 530 STCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKAD 589
C HAGLVD G YF SM ++V P ++HYGCMVDLL RAG L++A +I+ MPMKA+
Sbjct: 415 CGCTHAGLVDDGRHYFNSMSHDFSVTPTIEHYGCMVDLLARAGFLDEAHNLIKGMPMKAN 474
Query: 590 VVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKE 649
V++WG+LL R+H ++ E K L L+P + VLLSNIY+ + RW++A IR
Sbjct: 475 VIVWGSLLGGCRLHRETQLAEHVLKQLIELEPWNSGHYVLLSNIYSASRRWDEAEKIRST 534
Query: 650 MRDCGMKRLPGFSGV 664
+ + GM++LPG+S V
Sbjct: 535 VNEKGMQKLPGYSWV 549
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 123/519 (23%), Positives = 217/519 (41%), Gaps = 108/519 (20%)
Query: 7 HSVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLIN 66
H + KA + + + V L+ C+ G IHSL+FK+G + + F++ +++
Sbjct: 90 HLYASMHKAAIVPDSFTFSFV--LKACARLNLFHLGVMIHSLVFKTGFDCDVFVKTNVVC 147
Query: 67 LYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSM 126
Y+KCG L DA +VFD +K VS+T M
Sbjct: 148 FYSKCGF-------------------------------LRDAWKVFDDMVVKNVVSWTGM 176
Query: 127 IMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMI 186
I G + +REA+++FR + G+ P+ + V+ + LG + R + + + +
Sbjct: 177 ICGCIEFGKFREAVDLFRGLLESGLRPDGFVIVRVLRACARLGDLESGRWIDRCMRECGL 236
Query: 187 DGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFER 246
V ++T+L++MY C S+ EAR +FD M E++IV W+ M+ G+A GL A ELF
Sbjct: 237 SRNVFVATSLVDMYTKCGSMEEARFVFDGMVEKDIVCWSAMIQGYASNGLPREAIELFFE 296
Query: 247 IPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEG 306
+ +V P+ +V +S+C A G
Sbjct: 297 MRKVNV-------------------------------RPDCYAMVGALSSCASLGALELG 325
Query: 307 LQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRN 366
++ F + ++I FYA CG
Sbjct: 326 NWAKGLMNYEEFLSNPVLGTSLIDFYAKCGS----------------------------- 356
Query: 367 GMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVF 426
+E+A ++ M+++D ++A+ISG A Q A +F M G+ PNE T V +
Sbjct: 357 --MEEALGVYKMMKEKDRVVFNAVISGLAMYGQVGAAFGVFGQMGKFGIPPNEHTFVGLL 414
Query: 427 CAIASSGTLKEGR-----WAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIR 481
C +G + +GR +H++ S+T ++D+ A+ G ++ A + +
Sbjct: 415 CGCTHAGLVDDGRHYFNSMSHDF----SVTPTIEHYGCMVDLLARAGFLDEAHNLIKGMP 470
Query: 482 DRTTSVSPWNAIICGLAMHGDANL---TLKIYSDLEKRN 517
+ +V W +++ G +H + L LK +LE N
Sbjct: 471 MK-ANVIVWGSLLGGCRLHRETQLAEHVLKQLIELEPWN 508
>gi|449522252|ref|XP_004168141.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g37310-like [Cucumis sativus]
Length = 635
Score = 312 bits (799), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 188/645 (29%), Positives = 330/645 (51%), Gaps = 83/645 (12%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
+++C+ H+ G+Q+H+ + S + + F+ + LI+ Y+K
Sbjct: 10 IQHCTDHLFFRVGKQLHARLVLSSVVPDNFLGSKLISFYSK------------------- 50
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDM--- 146
SG IR DA VF K P K S+ ++ + + ++ + L++F +
Sbjct: 51 -------SGSIR-----DAYNVFGKIPRKNIFSWNALFISYTLHNMHTDLLKLFSSLVNS 98
Query: 147 RILGVIPNEVT-------LASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNM 199
V P+ T LAS+ S+S G+ + +H +++ ++ + + L+
Sbjct: 99 NSTDVKPDRFTVTCSLKALASLFSNS----GL--AKEVHSFILRRGLEYDIFVVNALITF 152
Query: 200 YCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMI 259
Y C LV AR +FD M ER+ VSWN ML G+++ G E +ELF
Sbjct: 153 YSRCDELVLARIMFDRMPERDTVSWNAMLAGYSQGGSYEECKELF--------------- 197
Query: 260 DGYLQVERLSEALTMYRAMLCD-GIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGF 318
R ML + PN + V ++ AC ++ G+++H + ++
Sbjct: 198 ----------------RVMLSSVEVKPNALTAVSVLQACAQSNDLTFGIEVHRFVNESQI 241
Query: 319 DCYDFIQATIIHFYAACGRINLARLQF-ELGIKDHIASWNALIAGFIRNGMIEDARQLFN 377
+ +I YA CG ++ AR F E+ KD I ++ ++I+G++ +G + A LF
Sbjct: 242 KMDVSLWNAVIGLYAKCGILDYARELFEEMPEKDGI-TYCSMISGYMVHGFVNQAMDLFR 300
Query: 378 NMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKE 437
++ + +W+A+ISG QN + A+++F M G +PN +T+ S+ + TLK
Sbjct: 301 EQERPRLPTWNAVISGLVQNNRQEGAVDIFRAMQSHGCRPNTVTLASILPVFSHFSTLKG 360
Query: 438 GRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGL 497
G+ H Y + N+ N ++ AIID YAKCG ++ A VF I+ R S+ W +II
Sbjct: 361 GKEIHGYAIRNTYDRNIYVATAIIDSYAKCGYLHGAQLVFDQIKGR--SLIAWTSIISAY 418
Query: 498 AMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPD 557
A+HGDAN+ L ++ ++ I+ + +TF VL+ C H+G +D + F + Y ++P
Sbjct: 419 AVHGDANVALSLFYEMLTNGIQPDQVTFTSVLAACAHSGELDEAWKIFNVLLPEYGIQPL 478
Query: 558 LKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLA 617
++HY CMV +L RAG+L DA E I MP++ +WG LL + + G+VE+G+ L
Sbjct: 479 VEHYACMVGVLSRAGKLSDAVEFISKMPLEPTAKVWGALLNGASVAGDVELGKYVFDRLF 538
Query: 618 GLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
++P + + V+++N+Y+ +GRW+DA +IR M++ +K++PG S
Sbjct: 539 EIEPENTGNYVIMANLYSQSGRWKDADTIRDLMKEVRLKKIPGNS 583
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 126/515 (24%), Positives = 229/515 (44%), Gaps = 70/515 (13%)
Query: 3 LDHFHSVFNSQKANLQNSDYELALVSALRYCSAHIAVSQ-GQQIHSLIFKSGLESNTFIQ 61
L F S+ NS +++ + + +L+ ++ + S +++HS I + GLE + F+
Sbjct: 89 LKLFSSLVNSNSTDVKPDRF--TVTCSLKALASLFSNSGLAKEVHSFILRRGLEYDIFVV 146
Query: 62 NSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCV 121
N+LI Y++C + A+ MFD D V+ N M++GY
Sbjct: 147 NALITFYSRCDELVLARIMFDRMPERDTVSWNAMLAGY---------------------- 184
Query: 122 SYTSMIMGFAQNDCWREALEVFRDM-RILGVIPNEVTLASVISSSVHLGGIWECRMLHGL 180
+Q + E E+FR M + V PN +T SV+ + + +H
Sbjct: 185 ---------SQGGSYEECKELFRVMLSSVEVKPNALTAVSVLQACAQSNDLTFGIEVHRF 235
Query: 181 VIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELA 240
V + I V + ++ +Y C L AR LF+EM E++ +++ M++G+ G V A
Sbjct: 236 VNESQIKMDVSLWNAVIGLYAKCGILDYARELFEEMPEKDGITYCSMISGYMVHGFVNQA 295
Query: 241 RELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRA 300
+LF + +W +I G +Q R A+ ++RAM G PN V + ++
Sbjct: 296 MDLFREQERPRLPTWNAVISGLVQNNRQEGAVDIFRAMQSHGCRPNTVTLASILPVFSHF 355
Query: 301 MAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALI 360
G +IH ++ +D ++ II YA CG ++ A+L
Sbjct: 356 STLKGGKEIHGYAIRNTYDRNIYVATAIIDSYAKCGYLHGAQL----------------- 398
Query: 361 AGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEI 420
+F+ ++ R + +W+++IS YA + N+AL LF+ M+ G++P+++
Sbjct: 399 --------------VFDQIKGRSLIAWTSIISAYAVHGDANVALSLFYEMLTNGIQPDQV 444
Query: 421 TMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLS--AAIIDMYAKCGSINTAFEVFY 478
T SV A A SG L E W VL + + A ++ + ++ G ++ A E
Sbjct: 445 TFTSVLAACAHSGELDEA-WKIFNVLLPEYGIQPLVEHYACMVGVLSRAGKLSDAVEFIS 503
Query: 479 HIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDL 513
+ T+ W A++ G ++ GD L ++ L
Sbjct: 504 KMPLEPTA-KVWGALLNGASVAGDVELGKYVFDRL 537
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/319 (22%), Positives = 137/319 (42%), Gaps = 40/319 (12%)
Query: 293 LISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDH 352
LI C + F G Q+H+ +V + +F+ + +I FY+ G I A F + +
Sbjct: 9 LIQHCTDHLFFRVGKQLHARLVLSSVVPDNFLGSKLISFYSKSGSIRDAYNVFGKIPRKN 68
Query: 353 IASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVD 412
I SWNAL + + M D +LF+++ +
Sbjct: 69 IFSWNALFISYTLHNMHTDLLKLFSSLVNSN----------------------------S 100
Query: 413 AGVKPNEITMVSVFCAIAS----SGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCG 468
VKP+ T+ A+AS SG KE H ++L + + + A+I Y++C
Sbjct: 101 TDVKPDRFTVTCSLKALASLFSNSGLAKE---VHSFILRRGLEYDIFVVNALITFYSRCD 157
Query: 469 SINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSD-LEKRNIKLNSITFIG 527
+ A +F + +R T WNA++ G + G +++ L +K N++T +
Sbjct: 158 ELVLARIMFDRMPERDT--VSWNAMLAGYSQGGSYEECKELFRVMLSSVEVKPNALTAVS 215
Query: 528 VLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMK 587
VL C + + G + + ++ D+ + ++ L + G L+ A E+ MP K
Sbjct: 216 VLQACAQSNDLTFGIEVHRFVNES-QIKMDVSLWNAVIGLYAKCGILDYARELFEEMPEK 274
Query: 588 ADVVIWGTLLAASRIHGNV 606
D + + ++++ +HG V
Sbjct: 275 -DGITYCSMISGYMVHGFV 292
>gi|449432255|ref|XP_004133915.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
chloroplastic-like [Cucumis sativus]
gi|449480068|ref|XP_004155790.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
chloroplastic-like [Cucumis sativus]
Length = 638
Score = 312 bits (799), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 201/642 (31%), Positives = 331/642 (51%), Gaps = 72/642 (11%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
LR+C V+Q +H+ I K+G N+ + +I S+ L
Sbjct: 21 LRHCETQNDVNQ---VHARIIKTGYLKNSSLTTKII-----------LNSISSPHKPLVE 66
Query: 90 VACNIMISGY----IRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRD 145
A + + Y IR + L+D + + ++I ++ + AL +F
Sbjct: 67 FARYVFFTRYAVQRIRRNHLDDDPFL-----------WNAVIKSYSHGNEPVRALVLFCM 115
Query: 146 MRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSS 205
M G ++ + + ++ + + + E + +HGL++KL I + + L+ MY C
Sbjct: 116 MLENGFCVDKFSFSLILKACARVCLVEEGKQIHGLLMKLEIGSNLFLLNCLIAMYLRCGD 175
Query: 206 LVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIP--SKDVVSWGTMIDGYL 263
+ AR +FD M ++ VS+N M++G+ K+G ++LARELF+ +P K+++SW +M+ G+
Sbjct: 176 IEFARQVFDRMPIQDSVSYNSMIDGYVKSGTIDLARELFDSMPLEDKNLISWNSMLGGFA 235
Query: 264 QVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDF 323
Q + DGI G A+ E + ++
Sbjct: 236 QTK--------------DGI--------------GLALELFEKMPERDLVS--------- 258
Query: 324 IQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRD 383
TII +A CGRI A F K + SW+ +I G+ + G I+ AR LF+ M +D
Sbjct: 259 -WNTIIGGFAKCGRIEFAHSLFNRMPKRDVISWSNMIDGYAKLGDIKVARTLFDEMPDKD 317
Query: 384 VYSWSAMISGYAQNEQPNMALELFHGMV-DAGVKPNEITMVSVFCAIASSGTLKEGRWAH 442
V +++ +++GYAQN ALE+FH M + + P+E T+V AI+ G +++ H
Sbjct: 318 VVAFNTIMAGYAQNGYYTEALEIFHEMQRQSNLSPDETTLVVALSAISQLGHVEKAASMH 377
Query: 443 EYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGD 502
Y L N I++ ++ A+IDMY+KCGSI A +F + + + WNA+I G+A +G
Sbjct: 378 NYFLENGISVTGKVAVALIDMYSKCGSIENAILIFDGVDQK--GIDHWNAMISGMARNGL 435
Query: 503 ANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYG 562
L + ++ + ++K + ITFIGVL+ C HAGLV G F+ M+ V+ +EP L+HYG
Sbjct: 436 GKLAFGMLLEMHRLSVKPDGITFIGVLNACAHAGLVKEGLICFELMRKVHKLEPKLQHYG 495
Query: 563 CMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPS 622
CMVD+LG+AG +E A + I MP++ + +IW TLL+A + H N +GE AK L +
Sbjct: 496 CMVDILGKAGLVEGALKFIEEMPIEPNDIIWRTLLSACQNHENFTIGELIAKHLMTMDSC 555
Query: 623 HGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
+ S VLLSNIYA G W A +R M+ + ++PG S +
Sbjct: 556 NSSSYVLLSNIYARLGLWSAASKVRMMMKKQNLTKVPGCSWI 597
Score = 47.0 bits (110), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 102/259 (39%), Gaps = 68/259 (26%)
Query: 3 LDHFHSVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQN 62
L+ FH + +++NL S E LV AL S V + +H+ ++G+ +
Sbjct: 338 LEIFHEM--QRQSNL--SPDETTLVVALSAISQLGHVEKAASMHNYFLENGISVTGKVAV 393
Query: 63 SLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVS 122
+LI++Y+KCG I A +FD D+ I
Sbjct: 394 ALIDMYSKCGSIENAILIFDGV----------------------------DQKGID---H 422
Query: 123 YTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVI 182
+ +MI G A+N + A + +M L V P+ +T V+++ H G + E GL
Sbjct: 423 WNAMISGMARNGLGKLAFGMLLEMHRLSVKPDGITFIGVLNACAHAGLVKE-----GL-- 475
Query: 183 KLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARE 242
+C L+ E + + M++ KAGLVE A +
Sbjct: 476 -------------------ICFELMRKVHKL----EPKLQHYGCMVDILGKAGLVEGALK 512
Query: 243 LFERIP--SKDVVSWGTMI 259
E +P D++ W T++
Sbjct: 513 FIEEMPIEPNDII-WRTLL 530
>gi|449479818|ref|XP_004155716.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Cucumis sativus]
Length = 512
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 169/422 (40%), Positives = 247/422 (58%), Gaps = 4/422 (0%)
Query: 243 LFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMA 302
LF++IP V + I + + +Y M G +PN L AC
Sbjct: 38 LFDQIPKPSVYLYNKFIQTFSSIGHPHRCWLLYCQMCSQGCSPNQYSFTFLFPACASLFN 97
Query: 303 FGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQF-ELGIKDHIASWNALIA 361
G +HS K+GF F ++ YA G + AR F E+ ++D I +WN+LIA
Sbjct: 98 VYPGQMLHSHFCKSGFASDMFAMTALLDMYAKLGMLRSARQLFDEMPVRD-IPTWNSLIA 156
Query: 362 GFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMV-DAGVKPNEI 420
G+ R+G +E A +LFN M R+V SW+A+ISGYAQN + ALE+F G+ + G KPNE+
Sbjct: 157 GYARSGHMEAALELFNKMPVRNVISWTALISGYAQNGKYAKALEMFIGLENEKGTKPNEV 216
Query: 421 TMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHI 480
++ SV A + G L G+ Y NN N +S A+++++A+CG+I A +VF I
Sbjct: 217 SIASVLPACSQLGALDIGKRIEAYARNNGFFKNAYVSNAVLELHARCGNIEEAQQVFDEI 276
Query: 481 RDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDL 540
+ S WN +I GLA+HG L++Y + R ++ + +TF+G+L C H G+V
Sbjct: 277 GSKRNLCS-WNTMIMGLAVHGRCIDALQLYDQMLIRKMRPDDVTFVGLLLACTHGGMVAE 335
Query: 541 GERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAAS 600
G + F+SM+S + V P L+HYGC+VDLLGRAG+L++A +I++MPM D VIWGTLL A
Sbjct: 336 GRQLFESMESKFQVAPKLEHYGCLVDLLGRAGELQEAYNLIQNMPMAPDSVIWGTLLGAC 395
Query: 601 RIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPG 660
HGNVE+GE AA+SL L+P + + V+LSNIYA AG W +RK M+ + + G
Sbjct: 396 SFHGNVELGEVAAESLFKLEPWNPGNYVILSNIYALAGDWSGVARLRKMMKGGHITKRAG 455
Query: 661 FS 662
+S
Sbjct: 456 YS 457
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 117/475 (24%), Positives = 203/475 (42%), Gaps = 80/475 (16%)
Query: 39 VSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISG 98
++Q +QIH+ ++GL+ F+ L+ L P AC +
Sbjct: 1 MNQLKQIHAYSLRNGLDHTKFLIEKLLQLPDL------------------PYACTL---- 38
Query: 99 YIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQ----NDCWREALEVFRDMRILGVIPN 154
FD+ P Y I F+ + CW ++ M G PN
Sbjct: 39 -------------FDQIPKPSVYLYNKFIQTFSSIGHPHRCWL----LYCQMCSQGCSPN 81
Query: 155 EVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFD 214
+ + + + L ++ +MLH K + T LL+MY L AR LFD
Sbjct: 82 QYSFTFLFPACASLFNVYPGQMLHSHFCKSGFASDMFAMTALLDMYAKLGMLRSARQLFD 141
Query: 215 EMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTM 274
EM R+I +WN ++ G+A++G +E A ELF ++P ++V+SW +I GY Q + ++AL M
Sbjct: 142 EMPVRDIPTWNSLIAGYARSGHMEAALELFNKMPVRNVISWTALISGYAQNGKYAKALEM 201
Query: 275 YRAMLCD-GIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYA 333
+ + + G PN+V I ++ AC + A G +I + GF ++ ++ +A
Sbjct: 202 FIGLENEKGTKPNEVSIASVLPACSQLGALDIGKRIEAYARNNGFFKNAYVSNAVLELHA 261
Query: 334 ACGRINLARLQF-ELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMIS 392
CG I A+ F E+G K ++ SWN +I G +G DA QL++ M R
Sbjct: 262 RCGNIEEAQQVFDEIGSKRNLCSWNTMIMGLAVHGRCIDALQLYDQMLIRK--------- 312
Query: 393 GYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITL 452
++P+++T V + A G + EGR E + + +
Sbjct: 313 ----------------------MRPDDVTFVGLLLACTHGGMVAEGRQLFE-SMESKFQV 349
Query: 453 NDNLS--AAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANL 505
L ++D+ + G + A+ + ++ SV W ++ + HG+ L
Sbjct: 350 APKLEHYGCLVDLLGRAGELQEAYNLIQNMPMAPDSVI-WGTLLGACSFHGNVEL 403
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 86/282 (30%), Positives = 141/282 (50%), Gaps = 39/282 (13%)
Query: 33 CSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVAC 92
C++ V GQ +HS KSG S+ F +L+++YAK G++ A+ +FD D
Sbjct: 92 CASLFNVYPGQMLHSHFCKSGFASDMFAMTALLDMYAKLGMLRSARQLFDEMPVRDIPTW 151
Query: 93 NIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMR-ILGV 151
N +I+GY R+ + A E+F+K P++ +S+T++I G+AQN + +ALE+F + G
Sbjct: 152 NSLIAGYARSGHMEAALELFNKMPVRNVISWTALISGYAQNGKYAKALEMFIGLENEKGT 211
Query: 152 IPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGF---VIISTNLLNMYCVCSSLVE 208
PNEV++ASV+ + LG + + + +GF +S +L ++ C ++ E
Sbjct: 212 KPNEVSIASVLPACSQLGALDIGKRIEAYARN---NGFFKNAYVSNAVLELHARCGNIEE 268
Query: 209 ARSLFDEM-KERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVER 267
A+ +FDE+ +RN+ SWN M+ G A G R
Sbjct: 269 AQQVFDEIGSKRNLCSWNTMIMGLAVHG-------------------------------R 297
Query: 268 LSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQI 309
+AL +Y ML + P+DV V L+ AC EG Q+
Sbjct: 298 CIDALQLYDQMLIRKMRPDDVTFVGLLLACTHGGMVAEGRQL 339
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 103/243 (42%), Gaps = 71/243 (29%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E+++ S L CS A+ G++I + +G N ++ N+++ L+A+CG I +A+ +FD
Sbjct: 215 EVSIASVLPACSQLGALDIGKRIEAYARNNGFFKNAYVSNAVLELHARCGNIEEAQQVFD 274
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
G RN S+ +MIMG A + +AL++
Sbjct: 275 EI-------------GSKRN-----------------LCSWNTMIMGLAVHGRCIDALQL 304
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
+ M I + P++VT ++ + H GG+
Sbjct: 305 YDQMLIRKMRPDDVTFVGLLLACTH-GGM------------------------------- 332
Query: 203 CSSLVEARSLFDEMKERNIVS-----WNVMLNGFAKAGLVELARELFERIP-SKDVVSWG 256
+ E R LF+ M+ + V+ + +++ +AG ++ A L + +P + D V WG
Sbjct: 333 ---VAEGRQLFESMESKFQVAPKLEHYGCLVDLLGRAGELQEAYNLIQNMPMAPDSVIWG 389
Query: 257 TMI 259
T++
Sbjct: 390 TLL 392
>gi|356509847|ref|XP_003523656.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Glycine max]
Length = 1611
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 195/626 (31%), Positives = 317/626 (50%), Gaps = 100/626 (15%)
Query: 42 GQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIR 101
G+QIH ++ +SGL+ + N LIN+Y K G +S+A+S+F + +D ++ N MISG
Sbjct: 954 GKQIHGIVMRSGLDQVVSVGNCLINMYVKAGSVSRARSVFGQMNEVDLISWNTMISG--- 1010
Query: 102 NDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASV 161
C +S +C ++ +F + ++P++ T+ASV
Sbjct: 1011 -----------------CTLS--------GLEEC---SVGMFVHLLRDSLLPDQFTVASV 1042
Query: 162 ISSSVHL-GGIWECRMLHGLVIK--LMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKE 218
+ + L GG + +H +K +++D FV ST L+++Y + EA LF
Sbjct: 1043 LRACSSLEGGYYLATQIHACAMKAGVVLDSFV--STALIDVYSKRGKMEEAEFLF----- 1095
Query: 219 RNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAM 278
V +GF D+ SW ++ GY+ +AL +Y M
Sbjct: 1096 -------VNQDGF-------------------DLASWNAIMHGYIVSGDFPKALRLYILM 1129
Query: 279 LCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRI 338
G + + +V+ A G + +G QIH+++VK GF+ F+ + ++ Y CG +
Sbjct: 1130 QESGERSDQITLVNAAKAAGGLVGLKQGKQIHAVVVKRGFNLDLFVTSGVLDMYLKCGEM 1189
Query: 339 NLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNE 398
E AR++F+ + D +W+ MISG +N
Sbjct: 1190 -------------------------------ESARRVFSEIPSPDDVAWTTMISGCVENG 1218
Query: 399 QPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSA 458
Q AL +H M + V+P+E T ++ A + L++GR H ++ + + +
Sbjct: 1219 QEEHALFTYHQMRLSKVQPDEYTFATLVKACSLLTALEQGRQIHANIVKLNCAFDPFVMT 1278
Query: 459 AIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNI 518
+++DMYAKCG+I A +F R T ++ WNA+I GLA HG+A L+ + ++ R +
Sbjct: 1279 SLVDMYAKCGNIEDARGLFK--RTNTRRIASWNAMIVGLAQHGNAKEALQFFKYMKSRGV 1336
Query: 519 KLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAE 578
+ +TFIGVLS C H+GLV F SM+ Y +EP+++HY C+VD L RAG++E+AE
Sbjct: 1337 MPDRVTFIGVLSACSHSGLVSEAYENFYSMQKNYGIEPEIEHYSCLVDALSRAGRIEEAE 1396
Query: 579 EVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAG 638
+VI SMP +A ++ TLL A R+ + E G+R A+ L L+PS + VLLSN+YA A
Sbjct: 1397 KVISSMPFEASASMYRTLLNACRVQVDRETGKRVAEKLLALEPSDSAAYVLLSNVYAAAN 1456
Query: 639 RWEDAFSIRKEMRDCGMKRLPGFSGV 664
+WE+ S R MR +K+ PGFS V
Sbjct: 1457 QWENVASARNMMRKVNVKKDPGFSWV 1482
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 141/648 (21%), Positives = 264/648 (40%), Gaps = 112/648 (17%)
Query: 4 DHFHSVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNS 63
D FH +++ + + + LA V + C + S + +H K GL+ + F+ +
Sbjct: 743 DGFHLFRLLRRSVVSTTRHTLAPV--FKMCLLSASPSASESLHGYAVKIGLQWDVFVAGA 800
Query: 64 LINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDK------TP- 116
L+N+YAK GLI +A+ +FD + D V N+M+ Y+ +A +F + P
Sbjct: 801 LVNIYAKFGLIREARVLFDGMAVRDVVLWNVMMKAYVDTCLEYEAMLLFSEFHRTGFRPD 860
Query: 117 ----------IKC--------------------------CVSYTSMIMGFAQNDCWREAL 140
+KC + + + F Q EA+
Sbjct: 861 DVTLRTLSRVVKCKKNILELKQFKAYATKLFMYDDDGSDVIVWNKALSRFLQRGEAWEAV 920
Query: 141 EVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMY 200
+ F DM V + +T +++ L + + +HG+V++ +D V + L+NMY
Sbjct: 921 DCFVDMINSRVACDGLTFVVMLTVVAGLNCLELGKQIHGIVMRSGLDQVVSVGNCLINMY 980
Query: 201 CVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMID 260
S+ ARS+F +M E +++SWN M++G +GL E
Sbjct: 981 VKAGSVSRARSVFGQMNEVDLISWNTMISGCTLSGLEEC--------------------- 1019
Query: 261 GYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGR-AMAFGEGLQIHSIIVKAGFD 319
++ M+ +L D + P+ + ++ AC + QIH+ +KAG
Sbjct: 1020 ----------SVGMFVHLLRDSLLPDQFTVASVLRACSSLEGGYYLATQIHACAMKAGVV 1069
Query: 320 CYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNM 379
F+ +I Y+ G++ A F +ASWNA++ G+I +G A +L+ M
Sbjct: 1070 LDSFVSTALIDVYSKRGKMEEAEFLFVNQDGFDLASWNAIMHGYIVSGDFPKALRLYILM 1129
Query: 380 QKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGR 439
Q ++G + ++IT+V+ A LK+G+
Sbjct: 1130 Q-------------------------------ESGERSDQITLVNAAKAAGGLVGLKQGK 1158
Query: 440 WAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAM 499
H V+ L+ +++ ++DMY KCG + +A VF I + W +I G
Sbjct: 1159 QIHAVVVKRGFNLDLFVTSGVLDMYLKCGEMESARRVFSEI--PSPDDVAWTTMISGCVE 1216
Query: 500 HGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLK 559
+G L Y + ++ + TF ++ C ++ G + ++ + N D
Sbjct: 1217 NGQEEHALFTYHQMRLSKVQPDEYTFATLVKACSLLTALEQGRQIHANIVKL-NCAFDPF 1275
Query: 560 HYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVE 607
+VD+ + G +EDA + + + + W ++ HGN +
Sbjct: 1276 VMTSLVDMYAKCGNIEDARGLFKRTNTRR-IASWNAMIVGLAQHGNAK 1322
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 143/631 (22%), Positives = 253/631 (40%), Gaps = 121/631 (19%)
Query: 28 SALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSC--S 85
S LR A +S G++ H+ I SG + F+ N+LI +YAKCG +S A+ +FD+ +
Sbjct: 661 SILRQAIAASDLSLGKRAHARILTSGHHPDRFVTNNLITMYAKCGSLSSARKLFDTTPDT 720
Query: 86 TLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRD 145
D V N ++S A D + +FR
Sbjct: 721 NRDLVTWNAILSALA------------------------------AHADKSHDGFHLFRL 750
Query: 146 MRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSS 205
+R V TLA V + LHG +K+ + V ++ L+N+Y
Sbjct: 751 LRRSVVSTTRHTLAPVFKMCLLSASPSASESLHGYAVKIGLQWDVFVAGALVNIYAKFGL 810
Query: 206 LVEARSLFDEMKERNIVSWNVMLNGFA--------------------------------- 232
+ EAR LFD M R++V WNVM+ +
Sbjct: 811 IREARVLFDGMAVRDVVLWNVMMKAYVDTCLEYEAMLLFSEFHRTGFRPDDVTLRTLSRV 870
Query: 233 ---KAGLVELARELFERIPSK---------DVVSWGTMIDGYLQVERLSEALTMYRAMLC 280
K ++EL + F+ +K DV+ W + +LQ EA+ + M+
Sbjct: 871 VKCKKNILELKQ--FKAYATKLFMYDDDGSDVIVWNKALSRFLQRGEAWEAVDCFVDMIN 928
Query: 281 DGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINL 340
+A + + V +++ G QIH I++++G D + +I+ Y G ++
Sbjct: 929 SRVACDGLTFVVMLTVVAGLNCLELGKQIHGIVMRSGLDQVVSVGNCLINMYVKAGSVSR 988
Query: 341 ARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQP 400
AR F + + SWN +I+G +G+ E
Sbjct: 989 ARSVFGQMNEVDLISWNTMISGCTLSGLEE------------------------------ 1018
Query: 401 NMALELFHGMVDAGVKPNEITMVSVFCAIAS-SGTLKEGRWAHEYVLNNSITLNDNLSAA 459
++ +F ++ + P++ T+ SV A +S G H + + L+ +S A
Sbjct: 1019 -CSVGMFVHLLRDSLLPDQFTVASVLRACSSLEGGYYLATQIHACAMKAGVVLDSFVSTA 1077
Query: 460 IIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIK 519
+ID+Y+K G + A F + ++ WNAI+ G + GD L++Y +++ +
Sbjct: 1078 LIDVYSKRGKMEEA--EFLFVNQDGFDLASWNAIMHGYIVSGDFPKALRLYILMQESGER 1135
Query: 520 LNSITFIGVLSTCCHAGLVDLGER---YFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLED 576
+ IT + GLV L + + +K +N+ DL ++D+ + G++E
Sbjct: 1136 SDQITLVNAAKAA--GGLVGLKQGKQIHAVVVKRGFNL--DLFVTSGVLDMYLKCGEMES 1191
Query: 577 AEEVIRSMPMKADVVIWGTLLAASRIHGNVE 607
A V +P DV W T+++ +G E
Sbjct: 1192 ARRVFSEIPSPDDVA-WTTMISGCVENGQEE 1221
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/359 (24%), Positives = 153/359 (42%), Gaps = 96/359 (26%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
++ LV+A + + + QG+QIH+++ K G + F+ + ++++Y KCG
Sbjct: 1138 QITLVNAAKAAGGLVGLKQGKQIHAVVVKRGFNLDLFVTSGVLDMYLKCG---------- 1187
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+ AR VF + P V++T+MI G +N AL
Sbjct: 1188 ---------------------EMESARRVFSEIPSPDDVAWTTMISGCVENGQEEHALFT 1226
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKL--MIDGFVIISTNLLNMY 200
+ MR+ V P+E T A+++ + L + + R +H ++KL D FV+ T+L++MY
Sbjct: 1227 YHQMRLSKVQPDEYTFATLVKACSLLTALEQGRQIHANIVKLNCAFDPFVM--TSLVDMY 1284
Query: 201 CVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMID 260
C ++ +AR LF R I SWN M+ G A+ G
Sbjct: 1285 AKCGNIEDARGLFKRTNTRRIASWNAMIVGLAQHG------------------------- 1319
Query: 261 GYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDC 320
EAL ++ M G+ P+ V + ++SAC HS +V ++
Sbjct: 1320 ------NAKEALQFFKYMKSRGVMPDRVTFIGVLSACS-----------HSGLVSEAYE- 1361
Query: 321 YDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNM 379
+FY+ +Q GI+ I ++ L+ R G IE+A ++ ++M
Sbjct: 1362 ---------NFYS---------MQKNYGIEPEIEHYSCLVDALSRAGRIEEAEKVISSM 1402
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 85/182 (46%), Gaps = 14/182 (7%)
Query: 320 CYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNM 379
C+ ++ I + G+ AR+ D + N LI + + G + AR+LF+
Sbjct: 659 CFSILRQAIAASDLSLGKRAHARILTSGHHPDRFVT-NNLITMYAKCGSLSSARKLFDTT 717
Query: 380 --QKRDVYSWSAMISGYAQN-EQPNMALELFHGMVDAGVKPNEITMVSVF--CAIASSGT 434
RD+ +W+A++S A + ++ + LF + + V T+ VF C +++S +
Sbjct: 718 PDTNRDLVTWNAILSALAAHADKSHDGFHLFRLLRRSVVSTTRHTLAPVFKMCLLSASPS 777
Query: 435 LKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVF--YHIRDRTTSVSPWNA 492
E H Y + + + ++ A++++YAK G I A +F +RD V WN
Sbjct: 778 ASES--LHGYAVKIGLQWDVFVAGALVNIYAKFGLIREARVLFDGMAVRD----VVLWNV 831
Query: 493 II 494
++
Sbjct: 832 MM 833
>gi|359480813|ref|XP_002277337.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g39350-like [Vitis vinifera]
Length = 634
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 197/646 (30%), Positives = 328/646 (50%), Gaps = 52/646 (8%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
L+ CS A+ QG+Q+H I GL+ + F+ L+ +YA CG + A+++FD S +
Sbjct: 30 LQLCSNSKALHQGKQLHQHIILCGLDHHPFMLTKLVQMYADCGDLGSAQALFDKLSQPNV 89
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
A +T+++ +++N E + + +M++
Sbjct: 90 FA-------------------------------WTAILGFYSRNGLSDECVRTYSEMKLK 118
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
GV+P++ V + L + +H V+ + + + +L++MY +
Sbjct: 119 GVLPDKYVFPKVFRACGQLLWLEVGIQVHKDVVICGCEFDLQVCNSLIDMYSKSGDVGSG 178
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFE----RIPSKDVVSWGTMIDGYLQV 265
R +FDEM ER+++SWN M++G+ G +E + EL R D+V+W T++D Y ++
Sbjct: 179 RRVFDEMVERDVLSWNSMISGYVCNGFLEFSVELLASMRIRGFEPDMVTWNTVMDAYCRM 238
Query: 266 ERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIV--KAGFDCYDF 323
EA ++ + PN + + L+S R + L I ++ + F D
Sbjct: 239 GLCDEAWEIFEQIK----EPNIISLTTLVSGYSRIGNHEKSLGIFREMMSRRVAFPDLDS 294
Query: 324 IQATII---HFYA-ACGR-INLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNN 378
+ + ++ H A CG+ I+ ++ + ++ AL+ +++ I+DA +F
Sbjct: 295 LSSVLVSCRHLGALVCGQEIHGYGIRSVDSSSFYKSAGAALLTMYVKCKRIQDALNVFEL 354
Query: 379 MQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG 438
M + DV +W+AMI G+ E ++ALE F M +G+ N+IT+ +V A LK G
Sbjct: 355 MDRFDVVTWNAMILGFVDLEMGHLALECFSKMQRSGIMNNQITISTVLPAC----DLKSG 410
Query: 439 RWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLA 498
+ H Y+ NS + + A+I MY+KCG I TA+ +F ++ R + WN +I G
Sbjct: 411 KQVHAYITKNSFSSVIPVWNALIHMYSKCGCIGTAYSIFSNMISR--DLVSWNTMIGGFG 468
Query: 499 MHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDL 558
MHG L++ D+ ++ NS+TF LS C H+GLVD G F +M + P +
Sbjct: 469 MHGLGQFALQLLRDMSHSDVCPNSVTFTSALSACSHSGLVDEGMELFHTMTRDFGFTPGM 528
Query: 559 KHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAG 618
+H+ C+VDLL RA +LEDA I MP+K IW LLAA R NV V + AA+ L
Sbjct: 529 EHFSCVVDLLARADRLEDAVGFIEKMPLKPSKHIWSALLAACRAQQNVSVAKLAAEQLFQ 588
Query: 619 LQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
L+P H + V LSNIYA AGRW+DA ++RK M D G+ + G+S +
Sbjct: 589 LEPEHAGNYVTLSNIYARAGRWDDAVAVRKLMEDRGLVKPSGYSWI 634
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/372 (21%), Positives = 156/372 (41%), Gaps = 59/372 (15%)
Query: 293 LISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDH 352
L+ C + A +G Q+H I+ G D + F+ ++ YA CG + A+ F+ + +
Sbjct: 29 LLQLCSNSKALHQGKQLHQHIILCGLDHHPFMLTKLVQMYADCGDLGSAQALFDKLSQPN 88
Query: 353 IASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVD 412
+ +W A++ + RNG+ ++ + ++ M+ +
Sbjct: 89 VFAWTAILGFYSRNGLSDECVRTYSEMKLK------------------------------ 118
Query: 413 AGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINT 472
GV P++ VF A L+ G H+ V+ + + ++IDMY+K G + +
Sbjct: 119 -GVLPDKYVFPKVFRACGQLLWLEVGIQVHKDVVICGCEFDLQVCNSLIDMYSKSGDVGS 177
Query: 473 AFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTC 532
VF + +R V WN++I G +G ++++ + + R + + +T+ V+
Sbjct: 178 GRRVFDEMVER--DVLSWNSMISGYVCNGFLEFSVELLASMRIRGFEPDMVTWNTVMDAY 235
Query: 533 CHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMK----- 587
C GL D F+ +K EP++ +V R G E + + R M +
Sbjct: 236 CRMGLCDEAWEIFEQIK-----EPNIISLTTLVSGYSRIGNHEKSLGIFREMMSRRVAFP 290
Query: 588 -----ADVVI----WGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAG 638
+ V++ G L+ IHG G R+ S + S G + L +Y
Sbjct: 291 DLDSLSSVLVSCRHLGALVCGQEIHG---YGIRSVDS-SSFYKSAGAA---LLTMYVKCK 343
Query: 639 RWEDAFSIRKEM 650
R +DA ++ + M
Sbjct: 344 RIQDALNVFELM 355
>gi|345505208|gb|AEN99828.1| chlororespiratory reduction 4 [Arabis hirsuta]
Length = 615
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 190/532 (35%), Positives = 294/532 (55%), Gaps = 45/532 (8%)
Query: 137 REALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNL 196
R+AL +F M GV ++ +L+ V+ + LG + E HG + K I + + L
Sbjct: 105 RKALLLFFLMLKNGVSVDKFSLSLVLKACSRLGFVKEGMQXHGFLRKTGIWSDLFLQNCL 164
Query: 197 LNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPS--KDVVS 254
+ +Y C L AR +FD M +R+ VS+N M++G+ K GL+E ARELF+ +PS K+++S
Sbjct: 165 IGLYLKCGCLGFARQVFDRMSQRDSVSYNSMIDGYVKCGLIESARELFDLMPSEKKNLIS 224
Query: 255 WGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIV 314
W +MI+GY Q RA DG VD+ S M + + +S+I
Sbjct: 225 WNSMINGYAQ-----------RA---DG--------VDIASNLFDEMPEKDLISWNSLI- 261
Query: 315 KAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQ 374
Y GRI A+ F+ + + +W ++ G+ + G + A+
Sbjct: 262 ---------------DGYVKHGRIEDAKDLFDKMPRRDVVTWATMVDGYAKLGFVHQAKS 306
Query: 375 LFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGM-VDAGVKPNEITMVSVFCAIASSG 433
LF+ M +RDV ++++M++GY QN A+++F+ M ++ + P+E T+V V AIA G
Sbjct: 307 LFDQMPQRDVVAYNSMMAGYVQNRYHMEAIDIFNDMEKESHLSPDETTLVIVLSAIAQLG 366
Query: 434 TLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAI 493
L + H Y + L L A+IDMY+KCGSI A VF I ++ S+ WNA+
Sbjct: 367 RLSKAMDMHLYTVEKKFLLGGKLGVALIDMYSKCGSIQQAMGVFERIENK--SIDHWNAM 424
Query: 494 ICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYN 553
I GLA+HG + +E+R+IK + ITF+GVL+ C H+GLV G F+ MK +
Sbjct: 425 IGGLAIHGLGESAFDMLLQIERRSIKPDDITFVGVLNACSHSGLVKEGLLCFELMKRKHK 484
Query: 554 VEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAA 613
+EP L+HYGCMVD+L R+G++E A+ +I MP++ + VIW T L A H E GE A
Sbjct: 485 IEPRLQHYGCMVDILSRSGRIELAKNLIEEMPIEPNDVIWRTFLTACSHHKEFETGELVA 544
Query: 614 KSLAGLQPSHGPSR-VLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
K L LQ + PS VLLSN+YA G W++ +R M++ ++++PG S +
Sbjct: 545 KHLI-LQAGYNPSSYVLLSNMYASLGMWKEVRRVRTMMKERKIQKIPGCSWI 595
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 126/456 (27%), Positives = 212/456 (46%), Gaps = 75/456 (16%)
Query: 22 YELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMF 81
+ L+LV L+ CS V +G Q H + K+G+ S+ F+QN LI LY KCG + A+ +F
Sbjct: 124 FSLSLV--LKACSRLGFVKEGMQXHGFLRKTGIWSDLFLQNCLIGLYLKCGCLGFARQVF 181
Query: 82 DSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTP--IKCCVSYTSMIMGFAQNDCWREA 139
D S D V+ N MI GY++ + ARE+FD P K +S+ SMI G+AQ
Sbjct: 182 DRMSQRDSVSYNSMIDGYVKCGLIESARELFDLMPSEKKNLISWNSMINGYAQR------ 235
Query: 140 LEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNM 199
+ V +AS + M + +I +L++
Sbjct: 236 -------------ADGVDIASNLFDE-------------------MPEKDLISWNSLIDG 263
Query: 200 YCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMI 259
Y + +A+ LFD+M R++V+W M++G+AK G V A+ LF+++P +DVV++ +M+
Sbjct: 264 YVKHGRIEDAKDLFDKMPRRDVVTWATMVDGYAKLGFVHQAKSLFDQMPQRDVVAYNSMM 323
Query: 260 DGYLQVERLSEALTMYRAMLCDG-IAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGF 318
GY+Q EA+ ++ M + ++P++ +V ++SA + + + +H V+ F
Sbjct: 324 AGYVQNRYHMEAIDIFNDMEKESHLSPDETTLVIVLSAIAQLGRLSKAMDMHLYTVEKKF 383
Query: 319 DCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNN 378
+ +I Y+ CG I A FE I WNA+I G +G+ E A +
Sbjct: 384 LLGGKLGVALIDMYSKCGSIQQAMGVFERIENKSIDHWNAMIGGLAIHGLGESAFDMLLQ 443
Query: 379 MQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG 438
+++R +KP++IT V V A + SG +KEG
Sbjct: 444 IERR-------------------------------SIKPDDITFVGVLNACSHSGLVKEG 472
Query: 439 RWAHEYV-LNNSITLNDNLSAAIIDMYAKCGSINTA 473
E + + I ++D+ ++ G I A
Sbjct: 473 LLCFELMKRKHKIEPRLQHYGCMVDILSRSGRIELA 508
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 100/373 (26%), Positives = 179/373 (47%), Gaps = 31/373 (8%)
Query: 250 KDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQI 309
+D W +I + +AL ++ ML +G++ + + ++ AC R EG+Q
Sbjct: 86 EDPFLWNAVIKSHSHGVEPRKALLLFFLMLKNGVSVDKFSLSLVLKACSRLGFVKEGMQX 145
Query: 310 HSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMI 369
H + K G F+Q +I Y CG + AR F+ + S+N++I G+++ G+I
Sbjct: 146 HGFLRKTGIWSDLFLQNCLIGLYLKCGCLGFARQVFDRMSQRDSVSYNSMIDGYVKCGLI 205
Query: 370 EDARQLFNNM--QKRDVYSWSAMISGYAQN-EQPNMALELFHGMVDAGVKPNEITMVSVF 426
E AR+LF+ M +K+++ SW++MI+GYAQ + ++A LF M E ++S
Sbjct: 206 ESARELFDLMPSEKKNLISWNSMINGYAQRADGVDIASNLFDEM-------PEKDLISWN 258
Query: 427 CAIASSGTLKEGRWAHEYVLNNSITLNDNLS-AAIIDMYAKCGSINTAFEVFYHIRDRTT 485
I G +K GR L + + D ++ A ++D YAK G ++ A +F + R
Sbjct: 259 SLI--DGYVKHGRIEDAKDLFDKMPRRDVVTWATMVDGYAKLGFVHQAKSLFDQMPQR-- 314
Query: 486 SVSPWNAIICGLAMHGDANLTLKIYSDLEKR-NIKLNSITFIGVLSTCCHAGLVDLGERY 544
V +N+++ G + + I++D+EK ++ + T + VLS G R
Sbjct: 315 DVVAYNSMMAGYVQNRYHMEAIDIFNDMEKESHLSPDETTLVIVLSAIAQLG------RL 368
Query: 545 FKSMK-SVYNVEPDLKHYG----CMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAA 599
K+M +Y VE G ++D+ + G ++ A V + K+ + W ++
Sbjct: 369 SKAMDMHLYTVEKKFLLGGKLGVALIDMYSKCGSIQQAMGVFERIENKS-IDHWNAMIGG 427
Query: 600 SRIHGNVEVGERA 612
IHG +GE A
Sbjct: 428 LAIHG---LGESA 437
>gi|345505218|gb|AEN99833.1| chlororespiratory reduction 4 [Crucihimalaya wallichii]
Length = 617
Score = 311 bits (798), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 192/534 (35%), Positives = 290/534 (54%), Gaps = 49/534 (9%)
Query: 137 REALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNL 196
R AL +F M GV ++ +L+ V+ + LG + E +HG + K + + + L
Sbjct: 107 RRALLLFCLMLENGVSVDKFSLSLVLKACSRLGLVKEGMQIHGFLKKTGLWSDLFLQNCL 166
Query: 197 LNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPS--KDVVS 254
+ +Y C L AR +FD M +R+ VS+N M++G+ K G E ARELF+ +P K+++S
Sbjct: 167 IGLYLKCGWLGFARQIFDRMPQRDSVSYNSMIDGYVKCGSTESARELFDLMPEEMKNLIS 226
Query: 255 WGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIV 314
W +MI GY Q DG VD+ S M + + +S+I
Sbjct: 227 WNSMISGYAQT--------------SDG--------VDIASKLFSEMPDKDLISWNSMID 264
Query: 315 KAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQ 374
Y GRI A+ F++ + + +W+ +I G+ + G + A+
Sbjct: 265 G----------------YVKHGRIEDAKYLFDVMPRRDVVTWSTMIDGYAKLGFVHQAKT 308
Query: 375 LFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGM-VDAGVKPNEITMVSVFCAIASSG 433
LF+ M RDV S+++MI+GY QN ALE+F M ++ + P+E T+V V AIA G
Sbjct: 309 LFDQMPHRDVVSYNSMIAGYVQNRYNMEALEIFSDMEKESHLSPDETTLVIVLSAIAQLG 368
Query: 434 TLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAI 493
L + H Y++ L L A+IDMY+KCGSI A VF I ++ S+ WNA+
Sbjct: 369 RLSKAMDMHLYIVEKQFFLGGKLGVALIDMYSKCGSIQHAMLVFKGIENK--SIDHWNAM 426
Query: 494 ICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYN 553
I GLA+HG + +E+R+IK + ITF+G+L+ C H+GLV G F+ M+ +
Sbjct: 427 IGGLAIHGLGESAFDMLLQIERRSIKPDDITFVGLLNACSHSGLVKEGLLCFELMRRKHK 486
Query: 554 VEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAA 613
+EP L+HYGCMVD+L R+G +E A+ +I MP++ + VIW T LAA H E GE A
Sbjct: 487 IEPRLQHYGCMVDILSRSGSIELAKNLIEEMPIEPNDVIWRTFLAACNHHKEFETGELVA 546
Query: 614 KSL---AGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
K L AG PS S VLLSN+YA G+W+D IR M++ ++++PG S +
Sbjct: 547 KHLIWEAGYNPS---SYVLLSNLYASFGKWKDVRRIRTIMKERKIEKVPGCSWI 597
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 134/457 (29%), Positives = 220/457 (48%), Gaps = 77/457 (16%)
Query: 22 YELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMF 81
+ L+LV L+ CS V +G QIH + K+GL S+ F+QN LI LY KCG + A+ +F
Sbjct: 126 FSLSLV--LKACSRLGLVKEGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGWLGFARQIF 183
Query: 82 DSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTP--IKCCVSYTSMIMGFAQNDCWREA 139
D D V+ N MI GY++ ARE+FD P +K +S+ SMI G+AQ
Sbjct: 184 DRMPQRDSVSYNSMIDGYVKCGSTESARELFDLMPEEMKNLISWNSMISGYAQTS----- 238
Query: 140 LEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNM 199
+ V +AS + S M D +I ++++
Sbjct: 239 --------------DGVDIASKLFSE-------------------MPDKDLISWNSMIDG 265
Query: 200 YCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMI 259
Y + +A+ LFD M R++V+W+ M++G+AK G V A+ LF+++P +DVVS+ +MI
Sbjct: 266 YVKHGRIEDAKYLFDVMPRRDVVTWSTMIDGYAKLGFVHQAKTLFDQMPHRDVVSYNSMI 325
Query: 260 DGYLQVERLSEALTMYRAMLCDG-IAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGF 318
GY+Q EAL ++ M + ++P++ +V ++SA + + + +H IV+ F
Sbjct: 326 AGYVQNRYNMEALEIFSDMEKESHLSPDETTLVIVLSAIAQLGRLSKAMDMHLYIVEKQF 385
Query: 319 DCYDFIQATIIHFYAACGRINLARLQFELGIKDH-IASWNALIAGFIRNGMIEDARQLFN 377
+ +I Y+ CG I A L F+ GI++ I WNA+I G +G+ E A +
Sbjct: 386 FLGGKLGVALIDMYSKCGSIQHAMLVFK-GIENKSIDHWNAMIGGLAIHGLGESAFDMLL 444
Query: 378 NMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKE 437
+++R +KP++IT V + A + SG +KE
Sbjct: 445 QIERR-------------------------------SIKPDDITFVGLLNACSHSGLVKE 473
Query: 438 GRWAHEYV-LNNSITLNDNLSAAIIDMYAKCGSINTA 473
G E + + I ++D+ ++ GSI A
Sbjct: 474 GLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELA 510
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 103/373 (27%), Positives = 181/373 (48%), Gaps = 31/373 (8%)
Query: 250 KDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQI 309
+D W +I + AL ++ ML +G++ + + ++ AC R EG+QI
Sbjct: 88 EDXYLWNAVIKSHSHGTDPRRALLLFCLMLENGVSVDKFSLSLVLKACSRLGLVKEGMQI 147
Query: 310 HSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMI 369
H + K G F+Q +I Y CG + AR F+ + S+N++I G+++ G
Sbjct: 148 HGFLKKTGLWSDLFLQNCLIGLYLKCGWLGFARQIFDRMPQRDSVSYNSMIDGYVKCGST 207
Query: 370 EDARQLFNNM--QKRDVYSWSAMISGYAQ-NEQPNMALELFHGMVDAGVKPNEITMVSVF 426
E AR+LF+ M + +++ SW++MISGYAQ ++ ++A +LF M D + I+ S+
Sbjct: 208 ESARELFDLMPEEMKNLISWNSMISGYAQTSDGVDIASKLFSEMPDKDL----ISWNSMI 263
Query: 427 CAIASSGTLKEGRWAHEYVLNNSITLNDNLS-AAIIDMYAKCGSINTAFEVFYHIRDRTT 485
G +K GR L + + D ++ + +ID YAK G ++ A +F + R
Sbjct: 264 -----DGYVKHGRIEDAKYLFDVMPRRDVVTWSTMIDGYAKLGFVHQAKTLFDQMPHR-- 316
Query: 486 SVSPWNAIICGLAMHGDANLTLKIYSDLEKR-NIKLNSITFIGVLSTCCHAGLVDLGERY 544
V +N++I G + L+I+SD+EK ++ + T + VLS G R
Sbjct: 317 DVVSYNSMIAGYVQNRYNMEALEIFSDMEKESHLSPDETTLVIVLSAIAQLG------RL 370
Query: 545 FKSMK-SVYNVEPDLKHYG----CMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAA 599
K+M +Y VE G ++D+ + G ++ A V + + K+ + W ++
Sbjct: 371 SKAMDMHLYIVEKQFFLGGKLGVALIDMYSKCGSIQHAMLVFKGIENKS-IDHWNAMIGG 429
Query: 600 SRIHGNVEVGERA 612
IHG +GE A
Sbjct: 430 LAIHG---LGESA 439
>gi|297744641|emb|CBI37903.3| unnamed protein product [Vitis vinifera]
Length = 516
Score = 311 bits (798), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 177/520 (34%), Positives = 279/520 (53%), Gaps = 21/520 (4%)
Query: 93 NIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVI 152
N+ S + N R R + +K C + + EA+ ++ G+
Sbjct: 8 NLNFSPFRTNPRKPRRRPCLVEAIVKLC-----------KKNKLNEAVSSLENLARRGLR 56
Query: 153 PNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGF----VIISTNLLNMYCVCSSLVE 208
+ TLAS++ + E + +H + L + G +S +L+NMY C VE
Sbjct: 57 LDSRTLASLLQHCADSRALREGKRVH---LHLKLTGLKRPGTFLSNHLINMYAKCGKEVE 113
Query: 209 ARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERL 268
AR +FD+M RN+ SWN ML+G+AK G+++ AR+LF+++P KDVVSW TM+ + Q
Sbjct: 114 ARKVFDKMSARNLYSWNNMLSGYAKLGMIKPARKLFDKMPEKDVVSWNTMVIAHAQCGYW 173
Query: 269 SEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATI 328
EAL Y GI N +++ C + G Q+H I+ AGF + +++
Sbjct: 174 DEALRFYSEFRQLGIQCNGFSFAGVLTVCVKLKEVGLTRQVHGQILVAGFLSNVVLSSSV 233
Query: 329 IHFYAACGRINLARLQF-ELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSW 387
+ Y CG + AR F E+ +D +A W +++G+ + G ++ A +LF M +++ SW
Sbjct: 234 LDAYVKCGLMGDARKLFDEMSARDVLA-WTTMVSGYAKWGDMKSANELFVEMPEKNPVSW 292
Query: 388 SAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLN 447
+A+ISGYA+N + ALELF M+ V+P++ T S CA AS +LK G+ H Y+L
Sbjct: 293 TALISGYARNGMGHKALELFTKMMLFHVRPDQFTFSSCLCACASIASLKHGKQIHAYLLR 352
Query: 448 NSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTL 507
+ N + +A+IDMY+KCGS+ +VF + V WN II LA HG +
Sbjct: 353 INFQPNTIVVSALIDMYSKCGSLGIGRKVF-DLMGNKLDVVLWNTIISALAQHGCGEEAI 411
Query: 508 KIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDL 567
++ D+ + K + ITF+ +L+ C H+GLV G +F+SM Y + P +HY C++DL
Sbjct: 412 QMLDDMVRSGAKPDKITFVVILNACSHSGLVQQGLNFFESMSCDYGIVPSQEHYACLIDL 471
Query: 568 LGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVE 607
LGRAG E+ + + MP K D +W LL RIHG++E
Sbjct: 472 LGRAGCFEEVMDQLEKMPYKPDDRVWNALLGVCRIHGHIE 511
Score = 228 bits (582), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 141/487 (28%), Positives = 247/487 (50%), Gaps = 49/487 (10%)
Query: 25 ALVSALRYCSAHIAVSQGQQIHSLIFKSGLE-SNTFIQNSLINLYAKCGLISQAKSMFDS 83
L S L++C+ A+ +G+++H + +GL+ TF+ N LIN+YAKCG +A+ +FD
Sbjct: 61 TLASLLQHCADSRALREGKRVHLHLKLTGLKRPGTFLSNHLINMYAKCGKEVEARKVFDK 120
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
S + + N M+SGY + + AR++FDK P K VS+ +M++ AQ W EAL +
Sbjct: 121 MSARNLYSWNNMLSGYAKLGMIKPARKLFDKMPEKDVVSWNTMVIAHAQCGYWDEALRFY 180
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGF---VIISTNLLNMY 200
+ R LG+ N + A V++ V L + R +HG ++++ GF V++S+++L+ Y
Sbjct: 181 SEFRQLGIQCNGFSFAGVLTVCVKLKEVGLTRQVHG---QILVAGFLSNVVLSSSVLDAY 237
Query: 201 CVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMID 260
C + +AR LFDEM R++++W M++G+AK G ++ A ELF +P K+ VSW +I
Sbjct: 238 VKCGLMGDARKLFDEMSARDVLAWTTMVSGYAKWGDMKSANELFVEMPEKNPVSWTALIS 297
Query: 261 GYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDC 320
GY + +AL ++ M+ + P+ + AC + G QIH+ +++ F
Sbjct: 298 GYARNGMGHKALELFTKMMLFHVRPDQFTFSSCLCACASIASLKHGKQIHAYLLRINFQP 357
Query: 321 YDFIQATIIHFYAACGRINLARLQFEL-GIKDHIASWNALIAGFIRNGMIEDARQLFNNM 379
+ + +I Y+ CG + + R F+L G K + WN +I+ ++G E+A Q+ ++
Sbjct: 358 NTIVVSALIDMYSKCGSLGIGRKVFDLMGNKLDVVLWNTIISALAQHGCGEEAIQMLDD- 416
Query: 380 QKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG- 438
MV +G KP++IT V + A + SG +++G
Sbjct: 417 ------------------------------MVRSGAKPDKITFVVILNACSHSGLVQQGL 446
Query: 439 RWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVF----YHIRDRTTSVSPWNAII 494
+ + I + A +ID+ + G + Y DR WNA++
Sbjct: 447 NFFESMSCDYGIVPSQEHYACLIDLLGRAGCFEEVMDQLEKMPYKPDDRV-----WNALL 501
Query: 495 CGLAMHG 501
+HG
Sbjct: 502 GVCRIHG 508
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 157/306 (51%), Gaps = 10/306 (3%)
Query: 6 FHSVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLI 65
F+S F ++ +Q + + A V L C V +Q+H I +G SN + +S++
Sbjct: 179 FYSEF--RQLGIQCNGFSFAGV--LTVCVKLKEVGLTRQVHGQILVAGFLSNVVLSSSVL 234
Query: 66 NLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTS 125
+ Y KCGL+ A+ +FD S D +A M+SGY + + A E+F + P K VS+T+
Sbjct: 235 DAYVKCGLMGDARKLFDEMSARDVLAWTTMVSGYAKWGDMKSANELFVEMPEKNPVSWTA 294
Query: 126 MIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLM 185
+I G+A+N +ALE+F M + V P++ T +S + + + + + +H ++++
Sbjct: 295 LISGYARNGMGHKALELFTKMMLFHVRPDQFTFSSCLCACASIASLKHGKQIHAYLLRIN 354
Query: 186 IDGFVIISTNLLNMYCVCSSLVEARSLFDEMKER-NIVSWNVMLNGFAKAGLVELARELF 244
I+ + L++MY C SL R +FD M + ++V WN +++ A+ G E A ++
Sbjct: 355 FQPNTIVVSALIDMYSKCGSLGIGRKVFDLMGNKLDVVLWNTIISALAQHGCGEEAIQML 414
Query: 245 ERI----PSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCD-GIAPNDVMIVDLISACGR 299
+ + D +++ +++ + + L + +M CD GI P+ LI GR
Sbjct: 415 DDMVRSGAKPDKITFVVILNACSHSGLVQQGLNFFESMSCDYGIVPSQEHYACLIDLLGR 474
Query: 300 AMAFGE 305
A F E
Sbjct: 475 AGCFEE 480
>gi|225430143|ref|XP_002282128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20540
[Vitis vinifera]
Length = 537
Score = 311 bits (798), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 171/499 (34%), Positives = 278/499 (55%), Gaps = 18/499 (3%)
Query: 175 RMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKA 234
R L L I+ M D FV I + C ++VE + + + + ++ + ++
Sbjct: 3 RKLRALKIREMEDMFVPILKD-------CPNIVELKKIHAHIVKFSLSQSSFLVTKMVDV 55
Query: 235 ----GLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDG-----IAP 285
G E A LF+ + + + MI Y + A+T+Y+ ML + I P
Sbjct: 56 CNHYGETEYANLLFKGVADPNAFLYNAMIRAYKHNKVYVLAITVYKQMLGNPHGENPIFP 115
Query: 286 NDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQF 345
+ ++ +C M + G Q+H + K G ++ +++ Y C ++ A F
Sbjct: 116 DKFTFPFVVKSCAGLMCYDLGKQVHGHVFKFGQKSNTVVENSLVEMYVKCDSLDDAHRVF 175
Query: 346 ELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALE 405
E + SWN LI+G +R G + AR +F MQ + ++SW+A++SGYA+ ALE
Sbjct: 176 EEMTERDAVSWNTLISGHVRLGQMRRARAIFEEMQDKTIFSWTAIVSGYARIGCYADALE 235
Query: 406 LFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYA 465
F M G++P+EI++VSV A G L+ G+W H Y N + A+I+MYA
Sbjct: 236 FFRRMQMVGIEPDEISLVSVLPDCAQLGALELGKWIHIYADKAGFLRNICVCNALIEMYA 295
Query: 466 KCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITF 525
KCGSI+ +F +++R V W+ +I GLA HG A ++++ +++K I+ + ITF
Sbjct: 296 KCGSIDQGRRLFDQMKER--DVISWSTMIVGLANHGRAREAIELFQEMQKAKIEPSIITF 353
Query: 526 IGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMP 585
+G+L+ C HAGL++ G RYF+SMK YN+EP ++HYGC+V+LLG +G+L+ A E+++ MP
Sbjct: 354 VGLLTACAHAGLLNEGLRYFESMKRDYNIEPGVEHYGCLVNLLGLSGRLDQALELVKKMP 413
Query: 586 MKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFS 645
K D IWG+LL++ R HGN+++ A + L L+P+ + VLLSN+YAD G+W+
Sbjct: 414 RKPDSPIWGSLLSSCRSHGNLKIAVIAMEHLLELEPADTGNYVLLSNLYADLGKWDGVSR 473
Query: 646 IRKEMRDCGMKRLPGFSGV 664
+RK MR MK+ PG S +
Sbjct: 474 MRKLMRSKSMKKTPGCSSI 492
Score = 158 bits (400), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 147/279 (52%), Gaps = 31/279 (11%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
++ C+ + G+Q+H +FK G +SNT ++NSL+ +Y KC + A +F+ + D
Sbjct: 124 VKSCAGLMCYDLGKQVHGHVFKFGQKSNTVVENSLVEMYVKCDSLDDAHRVFEEMTERDA 183
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
V+ N +ISG++R ++ AR +F++ K S+T+++ G+A+ C+ +ALE FR M+++
Sbjct: 184 VSWNTLISGHVRLGQMRRARAIFEEMQDKTIFSWTAIVSGYARIGCYADALEFFRRMQMV 243
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
G+ P+E++L SV+ LG + + +H K + + L+ MY C S+ +
Sbjct: 244 GIEPDEISLVSVLPDCAQLGALELGKWIHIYADKAGFLRNICVCNALIEMYAKCGSIDQG 303
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLS 269
R LFD+MKER+++SW+ M+ G A G R
Sbjct: 304 RRLFDQMKERDVISWSTMIVGLANHG-------------------------------RAR 332
Query: 270 EALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQ 308
EA+ +++ M I P+ + V L++AC A EGL+
Sbjct: 333 EAIELFQEMQKAKIEPSIITFVGLLTACAHAGLLNEGLR 371
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 100/243 (41%), Gaps = 72/243 (29%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E++LVS L C+ A+ G+ IH K+G N + N+LI +YAKCG I Q + +FD
Sbjct: 249 EISLVSVLPDCAQLGALELGKWIHIYADKAGFLRNICVCNALIEMYAKCGSIDQGRRLFD 308
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
D ++ + MI +G A + REA+E+
Sbjct: 309 QMKERDVISWSTMI-------------------------------VGLANHGRAREAIEL 337
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
F++M+ + P+ +T ++++ H G LLN
Sbjct: 338 FQEMQKAKIEPSIITFVGLLTACAHAG--------------------------LLN---- 367
Query: 203 CSSLVEARSLFDEMK-----ERNIVSWNVMLNGFAKAGLVELARELFERIPSK-DVVSWG 256
E F+ MK E + + ++N +G ++ A EL +++P K D WG
Sbjct: 368 -----EGLRYFESMKRDYNIEPGVEHYGCLVNLLGLSGRLDQALELVKKMPRKPDSPIWG 422
Query: 257 TMI 259
+++
Sbjct: 423 SLL 425
>gi|115456858|ref|NP_001052029.1| Os04g0110500 [Oryza sativa Japonica Group]
gi|38345581|emb|CAE01779.2| OSJNBa0027H06.17 [Oryza sativa Japonica Group]
gi|113563600|dbj|BAF13943.1| Os04g0110500 [Oryza sativa Japonica Group]
gi|125589117|gb|EAZ29467.1| hypothetical protein OsJ_13541 [Oryza sativa Japonica Group]
gi|215736988|dbj|BAG95917.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 531
Score = 311 bits (797), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 159/447 (35%), Positives = 257/447 (57%), Gaps = 8/447 (1%)
Query: 225 NVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIA 284
+L+ +A G + AR LF+ +P + +V M ++ + ++A+ ++ M+ DG+
Sbjct: 50 TALLSAYAALGSPDHARRLFDEMPEQGLVPRTAMARAHVASGQAAQAIAVFGDMVADGVF 109
Query: 285 PNDVMIVDLISACGRAMAF----GEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINL 340
P++V + + AC A ++ G +IH++IV +G + F+ +I Y CG++ +
Sbjct: 110 PDNVALAVALGACHGAGSWTARRNPGKKIHALIVTSGIEPDVFVSTELIRVYGECGKLAV 169
Query: 341 ARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQP 400
+R F+ +WNA++ + R+G ++ A +LF M +RDV SW+ +++GY +
Sbjct: 170 SRRVFDDMPSRSTITWNAMLHQYARHGKVDTAYELFLAMPRRDVVSWNTVMAGYCVAGRC 229
Query: 401 NMALELFHGMVDA---GVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLS 457
AL LF MV V PN TM ++ A A +G L+ G W H Y+ N + + L
Sbjct: 230 REALGLFRQMVSPSSCAVHPNVPTMSTILGACAGAGCLETGIWVHAYIERNRMNDDGYLD 289
Query: 458 AAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRN 517
+IDMY KCGSI+ A +VF R + W +ICGLAMHG A L+++ ++
Sbjct: 290 RCLIDMYCKCGSIDNALQVFEKA-PRKRDLFSWTTVICGLAMHGRATDALRMFDMMQDNG 348
Query: 518 IKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDA 577
I + +T +GVL+ C H GLVD G YF SM++ + + P ++HYGCM+DLLGR G+L++A
Sbjct: 349 ICPDDVTLVGVLNACAHGGLVDEGLGYFYSMEAKFRITPKIEHYGCMIDLLGRVGRLQEA 408
Query: 578 EEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADA 637
+IR+MPM + VIWG L+A ++HGN+E+G+ AA+ L L P RV+LS++YA A
Sbjct: 409 YSMIRTMPMDPNTVIWGAFLSACKVHGNMELGKIAAEELTRLDPDDPWGRVMLSSMYAKA 468
Query: 638 GRWEDAFSIRKEMRDCGMKRLPGFSGV 664
W R+EM +K+ PG S +
Sbjct: 469 QDWIGLARERREMNSMQVKKTPGCSSI 495
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 118/426 (27%), Positives = 193/426 (45%), Gaps = 53/426 (12%)
Query: 95 MISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPN 154
++S Y + AR +FD+ P + V T+M + +A+ VF DM GV P+
Sbjct: 52 LLSAYAALGSPDHARRLFDEMPEQGLVPRTAMARAHVASGQAAQAIAVFGDMVADGVFPD 111
Query: 155 EVTLASVISSSVHLGGIWECR-----MLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
V LA V + H G W R +H L++ I+ V +ST L+ +Y C L +
Sbjct: 112 NVALA-VALGACHGAGSWTARRNPGKKIHALIVTSGIEPDVFVSTELIRVYGECGKLAVS 170
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLS 269
R +FD+M R+ ++WN ML+ +A+ G V+ A ELF +P +DVVSW T++ GY R
Sbjct: 171 RRVFDDMPSRSTITWNAMLHQYARHGKVDTAYELFLAMPRRDVVSWNTVMAGYCVAGRCR 230
Query: 270 EALTMYRAMLCD---GIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQA 326
EAL ++R M+ + PN + ++ AC A G+ +H+ I + + ++
Sbjct: 231 EALGLFRQMVSPSSCAVHPNVPTMSTILGACAGAGCLETGIWVHAYIERNRMNDDGYLDR 290
Query: 327 TIIHFYAACGRINLARLQFELGI-KDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVY 385
+I Y CG I+ A FE K + SW +I G +G DA ++F+ MQ
Sbjct: 291 CLIDMYCKCGSIDNALQVFEKAPRKRDLFSWTTVICGLAMHGRATDALRMFDMMQ----- 345
Query: 386 SWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYV 445
D G+ P+++T+V V A A G + EG + Y
Sbjct: 346 --------------------------DNGICPDDVTLVGVLNACAHGGLVDEG-LGYFYS 378
Query: 446 LNNSITLNDNLS--AAIIDMYAKCGSINTAFEVFYHIRDRTTSVSP----WNAIICGLAM 499
+ + + +ID+ + G + A+ + RT + P W A + +
Sbjct: 379 MEAKFRITPKIEHYGCMIDLLGRVGRLQEAYSMI-----RTMPMDPNTVIWGAFLSACKV 433
Query: 500 HGDANL 505
HG+ L
Sbjct: 434 HGNMEL 439
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 133/273 (48%), Gaps = 41/273 (15%)
Query: 42 GQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIR 101
G++IH+LI SG+E + F+ LI +Y +CG ++ ++ +FD + + N M+ Y R
Sbjct: 135 GKKIHALIVTSGIEPDVFVSTELIRVYGECGKLAVSRRVFDDMPSRSTITWNAMLHQYAR 194
Query: 102 NDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDM---RILGVIPNEVTL 158
+ +++ A E+F P + VS+ +++ G+ REAL +FR M V PN T+
Sbjct: 195 HGKVDTAYELFLAMPRRDVVSWNTVMAGYCVAGRCREALGLFRQMVSPSSCAVHPNVPTM 254
Query: 159 ASVISSSVHLG----GIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFD 214
++++ + G GIW +H + + ++ + L++MYC C S+ A +F+
Sbjct: 255 STILGACAGAGCLETGIW----VHAYIERNRMNDDGYLDRCLIDMYCKCGSIDNALQVFE 310
Query: 215 EMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTM 274
+ + R+LF SW T+I G R ++AL M
Sbjct: 311 KAPRK---------------------RDLF---------SWTTVICGLAMHGRATDALRM 340
Query: 275 YRAMLCDGIAPNDVMIVDLISACGRAMAFGEGL 307
+ M +GI P+DV +V +++AC EGL
Sbjct: 341 FDMMQDNGICPDDVTLVGVLNACAHGGLVDEGL 373
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 100/236 (42%), Gaps = 39/236 (16%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
L C+ + G +H+ I ++ + + ++ LI++Y KCG I
Sbjct: 258 LGACAGAGCLETGIWVHAYIERNRMNDDGYLDRCLIDMYCKCGSI--------------- 302
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKC-CVSYTSMIMGFAQNDCWREALEVFRDMRI 148
++A +VF+K P K S+T++I G A + +AL +F M+
Sbjct: 303 ----------------DNALQVFEKAPRKRDLFSWTTVICGLAMHGRATDALRMFDMMQD 346
Query: 149 LGVIPNEVTLASVISSSVHLGGIWE-CRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLV 207
G+ P++VTL V+++ H G + E + + K I + ++++ L
Sbjct: 347 NGICPDDVTLVGVLNACAHGGLVDEGLGYFYSMEAKFRITPKIEHYGCMIDLLGRVGRLQ 406
Query: 208 EARSLFDEMK-ERNIVSWNVMLNGFAKAGLVELAR---ELFERIPSKDVVSWGTMI 259
EA S+ M + N V W L+ G +EL + E R+ D WG ++
Sbjct: 407 EAYSMIRTMPMDPNTVIWGAFLSACKVHGNMELGKIAAEELTRLDPDD--PWGRVM 460
>gi|297744892|emb|CBI38389.3| unnamed protein product [Vitis vinifera]
Length = 614
Score = 311 bits (797), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 158/438 (36%), Positives = 253/438 (57%), Gaps = 29/438 (6%)
Query: 227 MLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPN 286
+L +K ++ A +F+ + +V + +IDG++ EA+ +Y ML + I P+
Sbjct: 77 LLRSCSKCHAIDYASRIFQYTHNPNVYLYTALIDGFVSSGNYLEAIQLYSRMLHESILPD 136
Query: 287 DVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFE 346
+ ++ ++ ACG +A EG ++HS +K GF ++ I+ Y CG + AR FE
Sbjct: 137 NYLMASILKACGSQLALREGREVHSRALKLGFSSNRLVRLRIMELYGKCGELGDARRVFE 196
Query: 347 LGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALEL 406
+D +A +D W+AMI G+ +NE+ N ALE
Sbjct: 197 EMPEDVVA---------------------------KDTVCWTAMIDGFVRNEETNRALEA 229
Query: 407 FHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAK 466
F GM V+PNE T+V V A + G L+ GRW H Y+ I LN + A+I+MY++
Sbjct: 230 FRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNALINMYSR 289
Query: 467 CGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFI 526
CGSI+ A VF ++DR V +N +I GL+M+G + ++++ + R ++ ++TF+
Sbjct: 290 CGSIDEAQTVFDEMKDR--DVITYNTMISGLSMNGKSRQAIELFRVMVGRRLRPTNVTFV 347
Query: 527 GVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPM 586
GVL+ C H GLVD G F SM Y VEP ++HYGCMVDLLGR G+LE+A ++IR+M M
Sbjct: 348 GVLNACSHGGLVDFGFEIFHSMARDYRVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTMKM 407
Query: 587 KADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSI 646
D ++ GTLL+A ++H N+E+GE+ AK L + + VLLS++YA +G+W++A +
Sbjct: 408 TPDHIMLGTLLSACKMHKNLELGEQVAKELEDRGQADSGTYVLLSHVYASSGKWKEAAQV 467
Query: 647 RKEMRDCGMKRLPGFSGV 664
R +M++ GM++ PG S +
Sbjct: 468 RAKMKEAGMQKEPGCSSI 485
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 96/357 (26%), Positives = 159/357 (44%), Gaps = 81/357 (22%)
Query: 26 LVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCS 85
+ S L+ C + +A+ +G+++HS K G SN ++ ++ LY KCG
Sbjct: 140 MASILKACGSQLALREGREVHSRALKLGFSSNRLVRLRIMELYGKCG------------- 186
Query: 86 TLDPVACNIMISGYIRNDRLNDAREVFDKTP----IKCCVSYTSMIMGFAQNDCWREALE 141
L DAR VF++ P K V +T+MI GF +N+ ALE
Sbjct: 187 ------------------ELGDARRVFEEMPEDVVAKDTVCWTAMIDGFVRNEETNRALE 228
Query: 142 VFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYC 201
FR M+ V PNE T+ V+S+ LG + R +H + K I+ + + L+NMY
Sbjct: 229 AFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNALINMYS 288
Query: 202 VCSSLVEARSLFDEMKERNIVSWNVMLNGF------------------------------ 231
C S+ EA+++FDEMK+R+++++N M++G
Sbjct: 289 RCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIELFRVMVGRRLRPTNVTFVG 348
Query: 232 -----AKAGLVELARELFERIP-----SKDVVSWGTMIDGYLQVERLSEALTMYRAMLCD 281
+ GLV+ E+F + + +G M+D +V RL EA + R M
Sbjct: 349 VLNACSHGGLVDFGFEIFHSMARDYRVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTM--- 405
Query: 282 GIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAG-FDCYDFIQATIIHFYAACGR 337
+ P+ +M+ L+SAC G Q+ + G D ++ + H YA+ G+
Sbjct: 406 KMTPDHIMLGTLLSACKMHKNLELGEQVAKELEDRGQADSGTYV--LLSHVYASSGK 460
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 118/530 (22%), Positives = 221/530 (41%), Gaps = 104/530 (19%)
Query: 2 PLDHFHSVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQ 61
P H NS +L++ D + ++S L+ S HI +Q IH+ + ++G + F+
Sbjct: 19 PSPKPHPNSNSNPKSLKSLD-QKQIISLLQR-SRHI--NQVLPIHAQLIRNGHSQDPFMV 74
Query: 62 NSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCV 121
L+ +KC I A +F T +P N+ +
Sbjct: 75 FELLRSCSKCHAIDYASRIFQY--THNP---NVYL------------------------- 104
Query: 122 SYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLV 181
YT++I GF + + EA++++ M ++P+ +AS++ + + E R +H
Sbjct: 105 -YTALIDGFVSSGNYLEAIQLYSRMLHESILPDNYLMASILKACGSQLALREGREVHSRA 163
Query: 182 IKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELAR 241
+KL ++ ++ +Y C L +AR +F+EM E
Sbjct: 164 LKLGFSSNRLVRLRIMELYGKCGELGDARRVFEEMPED---------------------- 201
Query: 242 ELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAM 301
+ +KD V W MIDG+++ E + AL +R M + + PN+ IV ++SAC +
Sbjct: 202 -----VVAKDTVCWTAMIDGFVRNEETNRALEAFRGMQGENVRPNEFTIVCVLSACSQLG 256
Query: 302 AFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIA 361
A G +HS + K + F+ +I+ Y+ CG I+ A+ F+ + ++N +I+
Sbjct: 257 ALEIGRWVHSYMRKFEIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMIS 316
Query: 362 GFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEIT 421
G NG +RQ A+ELF MV ++P +T
Sbjct: 317 GLSMNG---KSRQ----------------------------AIELFRVMVGRRLRPTNVT 345
Query: 422 MVSVFCAIASSGTLKEG-RWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHI 480
V V A + G + G H + + ++D+ + G + A+++
Sbjct: 346 FVGVLNACSHGGLVDFGFEIFHSMARDYRVEPQIEHYGCMVDLLGRVGRLEEAYDLI--- 402
Query: 481 RDRTTSVSP----WNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFI 526
RT ++P ++ MH + L ++ +LE R + +S T++
Sbjct: 403 --RTMKMTPDHIMLGTLLSACKMHKNLELGEQVAKELEDRG-QADSGTYV 449
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/316 (22%), Positives = 138/316 (43%), Gaps = 35/316 (11%)
Query: 292 DLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKD 351
+IS R+ + L IH+ +++ G F+ ++ + C I+ A F+
Sbjct: 41 QIISLLQRSRHINQVLPIHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIFQYTHNP 100
Query: 352 HIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMV 411
++ + ALI GF+ +G +A QL++ M+
Sbjct: 101 NVYLYTALIDGFVSSGNYLEAIQLYSR-------------------------------ML 129
Query: 412 DAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSIN 471
+ P+ M S+ A S L+EGR H L + N + I+++Y KCG +
Sbjct: 130 HESILPDNYLMASILKACGSQLALREGREVHSRALKLGFSSNRLVRLRIMELYGKCGELG 189
Query: 472 TAFEVFYHIRDRTTSVSP--WNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVL 529
A VF + + + W A+I G + + N L+ + ++ N++ N T + VL
Sbjct: 190 DARRVFEEMPEDVVAKDTVCWTAMIDGFVRNEETNRALEAFRGMQGENVRPNEFTIVCVL 249
Query: 530 STCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKAD 589
S C G +++G R+ S + +E +L ++++ R G +++A+ V M + D
Sbjct: 250 SACSQLGALEIG-RWVHSYMRKFEIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDR-D 307
Query: 590 VVIWGTLLAASRIHGN 605
V+ + T+++ ++G
Sbjct: 308 VITYNTMISGLSMNGK 323
>gi|225469326|ref|XP_002268072.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Vitis vinifera]
Length = 590
Score = 311 bits (797), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 197/642 (30%), Positives = 309/642 (48%), Gaps = 102/642 (15%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAK-CGLISQAKSMF 81
+L L++++ C + +QIH+ + SGL + F+ + + + K G + A
Sbjct: 5 KLRLLNSIHRCKT---IRSLKQIHAHLIASGLLHDEFVLSKVSEFFGKHIGFVDYA---- 57
Query: 82 DSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALE 141
D LN P Y ++I +A + + A
Sbjct: 58 --------------------FDFLNQTDLHVGTLP------YNTLIAAYASSCTPKAAFL 91
Query: 142 VFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYC 201
V+ + G +P+ T V+ + G+ E +HG+ +K+ + + +LL+ Y
Sbjct: 92 VYGRIVGNGFVPDMYTFPVVLKACTKFLGVQEGEQVHGVAVKMGFLCDLYVQNSLLHFYS 151
Query: 202 VCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDG 261
VC A +FDEM R DVVSW +I G
Sbjct: 152 VCGKWGGAGRVFDEMLVR-------------------------------DVVSWTGLISG 180
Query: 262 YLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCY 321
Y++ EA+ ++ M + PN V ++ ACGR G +H ++ K F
Sbjct: 181 YVRTGLFDEAINLFLKM---DVVPNVATFVSVLVACGRMGYLSMGKGVHGLVYKRAF--- 234
Query: 322 DFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQK 381
GI + NAL+ +++ + +AR+LF+ +
Sbjct: 235 --------------------------GIG--LVVGNALVDMYVKCECLCEARKLFDELPD 266
Query: 382 RDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWA 441
RD+ SW+++ISG Q +QP +LELF+ M +GV+P+ I + SV A AS G L GRW
Sbjct: 267 RDIVSWTSIISGLVQCKQPKDSLELFYDMQISGVEPDRIILTSVLSACASLGALDYGRWV 326
Query: 442 HEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHG 501
EY+ I + ++ A++DMYAKCG I A +F I +R ++ WNA++ GLAMHG
Sbjct: 327 QEYIERQGIEWDIHIGTALVDMYAKCGCIEMALHIFNGIPNR--NIFTWNALLGGLAMHG 384
Query: 502 DANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKS-VYNVEPDLKH 560
+ LK + + I+ N +TF+ +L+ CCH+GLV G YF M S +N P L+H
Sbjct: 385 HGHEALKHFELMIGAGIRPNEVTFLAILTACCHSGLVAEGRSYFYQMISQPFNFSPRLEH 444
Query: 561 YGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQ 620
YGCM+DLL RAG L++A + IR+MP+ DV+IWG LL+A + +GNVE+ + L L+
Sbjct: 445 YGCMIDLLCRAGLLDEAYKFIRNMPLPPDVLIWGALLSACKANGNVELSQEILSHLLELK 504
Query: 621 PSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
VLLSNIYA RW+D +R+ M+D G+++ PG S
Sbjct: 505 SQDSGVYVLLSNIYATNERWDDVTRVRRLMKDKGIRKFPGSS 546
>gi|115471325|ref|NP_001059261.1| Os07g0239600 [Oryza sativa Japonica Group]
gi|33146689|dbj|BAC80084.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50510012|dbj|BAD30625.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610797|dbj|BAF21175.1| Os07g0239600 [Oryza sativa Japonica Group]
Length = 720
Score = 311 bits (797), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 176/570 (30%), Positives = 295/570 (51%), Gaps = 37/570 (6%)
Query: 99 YIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILG-VIPNEVT 157
++R R +DAR VFD+ P + +T I G A+ + + + F +M G PN
Sbjct: 55 WVRRRRFHDARGVFDERPTRTAPVWTLTISGCARRGRYADGMRAFAEMLAEGEATPNAFV 114
Query: 158 LASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMK 217
LA+V+ +G + + +HG +++ + V++ +L+MY C AR +F M
Sbjct: 115 LAAVVRCCAGMGDVESGKRVHGWMLRNGVHLDVVLCNAVLDMYAKCGQFERARRVFGAMA 174
Query: 218 ERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRA 277
ER+ VSWN+ + ++G + + +LF+ P +D SW T+I G ++ ++AL+ R
Sbjct: 175 ERDAVSWNIAIGACIQSGDILGSMQLFDESPLRDTTSWNTIISGLMRSGHAADALSHLRR 234
Query: 278 MLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGR 337
M G+ N G + G Q+H ++ A + F++++++ Y CG
Sbjct: 235 MAQAGVVFNHYTYSTAFVLAGMLLLPDLGRQLHGRVLIAALEGDAFVRSSLMDMYCKCGL 294
Query: 338 INLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDV-YSWSAMISGYAQ 396
+ A F DH W+ L RD+ ++WS M++GY Q
Sbjct: 295 LEAAASVF-----DH---WSPLT---------------------RDMNFAWSTMVAGYVQ 325
Query: 397 NEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNL 456
N + AL+LF M+ GV + T+ SV A A+ G +++GR H V L+ L
Sbjct: 326 NGREEEALDLFRRMLREGVAADRFTLTSVAAACANVGMVEQGRQVHGCVEKLWYKLDAPL 385
Query: 457 SAAIIDMYAKCGSINTAFEVFYHIRDR--TTSVSPWNAIICGLAMHGDANLTLKIYSDLE 514
++AI+DMYAKCG++ A +F DR T +++ W +++C A HG + ++++ +
Sbjct: 386 ASAIVDMYAKCGNLEDARSIF----DRACTKNIAVWTSMLCSYASHGQGRIAIELFERMT 441
Query: 515 KRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQL 574
+ N IT +GVLS C H GLV GE YFK M+ Y + P ++HY C+VDL GR+G L
Sbjct: 442 AEKMTPNEITLVGVLSACSHVGLVSEGELYFKQMQEEYGIVPSIEHYNCIVDLYGRSGLL 501
Query: 575 EDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIY 634
+ A+ I + + ++W TLL+A R+H + E + A++ L L+ S V+LSNIY
Sbjct: 502 DKAKNFIEENNINHEAIVWKTLLSACRLHQHNEYAKLASEKLVQLEQCDAGSYVMLSNIY 561
Query: 635 ADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
A +W D F +R M++ +++ PG S +
Sbjct: 562 ATNNKWHDTFELRVSMQERKVRKQPGRSWI 591
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 113/461 (24%), Positives = 211/461 (45%), Gaps = 80/461 (17%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
L + +R C+ V G+++H + ++G+ + + N+++++YAKCG +A+ +F +
Sbjct: 113 FVLAAVVRCCAGMGDVESGKRVHGWMLRNGVHLDVVLCNAVLDMYAKCGQFERARRVFGA 172
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
+ D V+ NI I I++ + + ++FD++P++ S+ ++I G ++ +AL
Sbjct: 173 MAERDAVSWNIAIGACIQSGDILGSMQLFDESPLRDTTSWNTIISGLMRSGHAADALSHL 232
Query: 144 RDMRILGVIPNEVTLAS--VISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYC 201
R M GV+ N T ++ V++ + L + R LHG V+ ++G + ++L++MYC
Sbjct: 233 RRMAQAGVVFNHYTYSTAFVLAGMLLLPDL--GRQLHGRVLIAALEGDAFVRSSLMDMYC 290
Query: 202 VCSSLVEARSLFDE----MKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGT 257
C L A S+FD ++ N +W+ M+ G+ + G
Sbjct: 291 KCGLLEAAASVFDHWSPLTRDMNF-AWSTMVAGYVQNG---------------------- 327
Query: 258 MIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAG 317
R EAL ++R ML +G+A + + + +AC +G Q+H + K
Sbjct: 328 ---------REEEALDLFRRMLREGVAADRFTLTSVAAACANVGMVEQGRQVHGCVEKLW 378
Query: 318 FDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFN 377
+ + + I+ YA CG + AR F+ +IA W
Sbjct: 379 YKLDAPLASAIVDMYAKCGNLEDARSIFDRACTKNIAVW--------------------- 417
Query: 378 NMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKE 437
++M+ YA + Q +A+ELF M + PNEIT+V V A + G + E
Sbjct: 418 ----------TSMLCSYASHGQGRIAIELFERMTAEKMTPNEITLVGVLSACSHVGLVSE 467
Query: 438 G-----RWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTA 473
G + EY + SI + I+D+Y + G ++ A
Sbjct: 468 GELYFKQMQEEYGIVPSIEHYN----CIVDLYGRSGLLDKA 504
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 90/215 (41%), Gaps = 45/215 (20%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
L S C+ V QG+Q+H + K + + + ++++++YAKCG
Sbjct: 349 FTLTSVAAACANVGMVEQGRQVHGCVEKLWYKLDAPLASAIVDMYAKCG----------- 397
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
L DAR +FD+ K +TSM+ +A + R A+E+F
Sbjct: 398 --------------------NLEDARSIFDRACTKNIAVWTSMLCSYASHGQGRIAIELF 437
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
M + PNE+TL V+S+ H+G + E L K M + + I+ + + Y
Sbjct: 438 ERMTAEKMTPNEITLVGVLSACSHVGLVSEGE----LYFKQMQEEYGIVPS--IEHYNCI 491
Query: 204 SSLVEARSLFDEMK----ERNI----VSWNVMLNG 230
L L D+ K E NI + W +L+
Sbjct: 492 VDLYGRSGLLDKAKNFIEENNINHEAIVWKTLLSA 526
>gi|357446017|ref|XP_003593286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355482334|gb|AES63537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 622
Score = 311 bits (796), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 183/592 (30%), Positives = 307/592 (51%), Gaps = 74/592 (12%)
Query: 81 FDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREAL 140
F + S DP+ N +IS Y + + AR+VFD P + +++ SMI + QN EAL
Sbjct: 93 FITGSYTDPIVSNSIISMYAKFFDIESARQVFDTMPHRDTITWNSMINAYLQNGLLVEAL 152
Query: 141 EVFRDMRILGVIPNEVTLASVIS---SSVHLGGIWEC-RMLHGLVI---KLMIDGFVIIS 193
++ +D LG +P LAS++S + LG W R +HGLV+ ++ I V +S
Sbjct: 153 QMLKDFYFLGFLPKPELLASMVSMCGREMDLG--WRIGRQIHGLVVVDGRIRIQHSVFLS 210
Query: 194 TNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVV 253
T ++ Y C + ARS+FDEM+ K+ V
Sbjct: 211 TAFVDFYFRCGDSLMARSVFDEME-------------------------------VKNEV 239
Query: 254 SWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSII 313
SW +I G + AL YR M +G++PN V ++ L++AC R G +IH
Sbjct: 240 SWTAVISGCANNQDYDVALACYREMQVEGVSPNRVTLIALLAACARPGFVKYGKEIHGYA 299
Query: 314 VKAGFD-CYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDA 372
+ GFD C+ F A +I+ Y CG+ + A
Sbjct: 300 FRRGFDSCHSFSPA-LIYLYCECGQ------------------------------SLHLA 328
Query: 373 RQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASS 432
++F RDV WS++I YA+ + + AL+LF+ M +PN +T+++V A +
Sbjct: 329 ERIFEGSSLRDVVLWSSIIGSYARRGESDKALKLFNKMRTEETEPNYVTLLAVISACTNL 388
Query: 433 GTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNA 492
+ K G H Y+L I + + A+I+MYAKCGS++ + ++F + R + WN+
Sbjct: 389 SSFKHGGVIHGYILKFGIGFSIFVCNALINMYAKCGSLDDSRKIFLEMPSRDSVT--WNS 446
Query: 493 IICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVY 552
+I +HG L+ + ++++R +KL+++TF+ VLS C HAGLV G++ F+ + +
Sbjct: 447 MISAYGLHGYGEQALQHFYEMKERGVKLDAVTFLAVLSACNHAGLVTEGQQLFEQVNADC 506
Query: 553 NVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERA 612
+ ++HY C++DL GR+G+LEDA E++R+MPMK IW +L+++ ++HG +++ E
Sbjct: 507 EIPITIEHYACLIDLHGRSGKLEDALEILRTMPMKPSARIWSSLVSSCKLHGRLDIAESL 566
Query: 613 AKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
+ L +P++ S LLS I+A+ GRW D +R+ M+ +++ GFS +
Sbjct: 567 SSQLIRSEPNNAASYTLLSMIHAEKGRWLDIEQVRETMKLQRLRKCYGFSRI 618
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 114/482 (23%), Positives = 209/482 (43%), Gaps = 109/482 (22%)
Query: 42 GQQIHSLIFKSG---LESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISG 98
G+QIH L+ G ++ + F+ + ++ Y +CG A+S+F
Sbjct: 188 GRQIHGLVVVDGRIRIQHSVFLSTAFVDFYFRCGDSLMARSVF----------------- 230
Query: 99 YIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTL 158
D+ +K VS+T++I G A N + AL +R+M++ GV PN VTL
Sbjct: 231 --------------DEMEVKNEVSWTAVISGCANNQDYDVALACYREMQVEGVSPNRVTL 276
Query: 159 ASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC-SSLVEARSLFDEMK 217
+++++ G + + +HG + D S L+ +YC C SL A +F+
Sbjct: 277 IALLAACARPGFVKYGKEIHGYAFRRGFDSCHSFSPALIYLYCECGQSLHLAERIFEGSS 336
Query: 218 ERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRA 277
R++V W+ ++ +A+ G + A +LF ++ +++
Sbjct: 337 LRDVVLWSSIIGSYARRGESDKALKLFNKMRTEET------------------------- 371
Query: 278 MLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGR 337
PN V ++ +ISAC +F G IH I+K G F+ +I+ YA CG
Sbjct: 372 ------EPNYVTLLAVISACTNLSSFKHGGVIHGYILKFGIGFSIFVCNALINMYAKCGS 425
Query: 338 INLARLQF-ELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQ 396
++ +R F E+ +D + +WN++I+ + +G E A Q F M++R
Sbjct: 426 LDDSRKIFLEMPSRDSV-TWNSMISAYGLHGYGEQALQHFYEMKER-------------- 470
Query: 397 NEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYV-LNNSITLNDN 455
GVK + +T ++V A +G + EG+ E V + I +
Sbjct: 471 -----------------GVKLDAVTFLAVLSACNHAGLVTEGQQLFEQVNADCEIPITIE 513
Query: 456 LSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSP----WNAIICGLAMHGDANLTLKIYS 511
A +ID++ + G + A E+ RT + P W++++ +HG ++ + S
Sbjct: 514 HYACLIDLHGRSGKLEDALEIL-----RTMPMKPSARIWSSLVSSCKLHGRLDIAESLSS 568
Query: 512 DL 513
L
Sbjct: 569 QL 570
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 102/422 (24%), Positives = 173/422 (40%), Gaps = 98/422 (23%)
Query: 20 SDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKS 79
S + L++ L C+ V G++IH F+ G +S +LI LY +CG
Sbjct: 270 SPNRVTLIALLAACARPGFVKYGKEIHGYAFRRGFDSCHSFSPALIYLYCECG------- 322
Query: 80 MFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREA 139
L+ A +F+ + ++ V ++S+I +A+ +A
Sbjct: 323 -----------------------QSLHLAERIFEGSSLRDVVLWSSIIGSYARRGESDKA 359
Query: 140 LEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNM 199
L++F MR PN VTL +VIS+ +L ++HG ++K I + + L+NM
Sbjct: 360 LKLFNKMRTEETEPNYVTLLAVISACTNLSSFKHGGVIHGYILKFGIGFSIFVCNALINM 419
Query: 200 YCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMI 259
Y C SL ++R +F EM R+ V+WN M++ + G E A + F
Sbjct: 420 YAKCGSLDDSRKIFLEMPSRDSVTWNSMISAYGLHGYGEQALQHF--------------- 464
Query: 260 DGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFD 319
Y ER G+ + V + ++SAC A EG Q+ + D
Sbjct: 465 --YEMKER--------------GVKLDAVTFLAVLSACNHAGLVTEGQQLFE---QVNAD 505
Query: 320 CYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNM 379
C I TI H+ AC LI R+G +EDA ++ M
Sbjct: 506 CE--IPITIEHY--AC-----------------------LIDLHGRSGKLEDALEILRTM 538
Query: 380 Q-KRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG 438
K WS+++S + + ++A L ++ + +PN ++ I + ++G
Sbjct: 539 PMKPSARIWSSLVSSCKLHGRLDIAESLSSQLIRS--EPNNAASYTLLSMIHA----EKG 592
Query: 439 RW 440
RW
Sbjct: 593 RW 594
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 131/320 (40%), Gaps = 47/320 (14%)
Query: 289 MIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELG 348
++ +I AC G Q+H + G + +II YA I AR F+
Sbjct: 68 VLPSVIKACSFTHFHAFGTQLHCLAFITGSYTDPIVSNSIISMYAKFFDIESARQVFDTM 127
Query: 349 IKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFH 408
+WN++I +++NG++ +A Q+ +D Y F
Sbjct: 128 PHRDTITWNSMINAYLQNGLLVEALQML-----KDFY---------------------FL 161
Query: 409 GMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEY-VLNNSITLNDN--LSAAIIDMYA 465
G + KP + + C + GR H V++ I + + LS A +D Y
Sbjct: 162 GFLP---KPELLASMVSMCGREMDLGWRIGRQIHGLVVVDGRIRIQHSVFLSTAFVDFYF 218
Query: 466 KCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITF 525
+CG A VF + + VS W A+I G A + D ++ L Y +++ + N +T
Sbjct: 219 RCGDSLMARSVFDEMEVK-NEVS-WTAVISGCANNQDYDVALACYREMQVEGVSPNRVTL 276
Query: 526 IGVLSTCCHAGLVDLGER-----YFKSMKSVYNVEPDLKHYGCMVDLLGRAGQ-LEDAEE 579
I +L+ C G V G+ + + S ++ P L + C GQ L AE
Sbjct: 277 IALLAACARPGFVKYGKEIHGYAFRRGFDSCHSFSPALIYLYC------ECGQSLHLAER 330
Query: 580 VIRSMPMKADVVIWGTLLAA 599
+ ++ DVV+W +++ +
Sbjct: 331 IFEGSSLR-DVVLWSSIIGS 349
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 124/291 (42%), Gaps = 51/291 (17%)
Query: 9 VFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLY 68
+FN + +Y + L++ + C+ + G IH I K G+ + F+ N+LIN+Y
Sbjct: 362 LFNKMRTEETEPNY-VTLLAVISACTNLSSFKHGGVIHGYILKFGIGFSIFVCNALINMY 420
Query: 69 AKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIM 128
AKCG + ++ +F + D V N MIS Y +
Sbjct: 421 AKCGSLDDSRKIFLEMPSRDSVTWNSMISAY--------------------------GLH 454
Query: 129 GFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLV-----IK 183
G+ + +AL+ F +M+ GV + VT +V+S+ H G + E + L V I
Sbjct: 455 GYGE-----QALQHFYEMKERGVKLDAVTFLAVLSACNHAGLVTEGQQLFEQVNADCEIP 509
Query: 184 LMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVS-WNVMLNGFAKAGLVELARE 242
+ I+ + L++++ L +A + M + W+ +++ G +++A
Sbjct: 510 ITIEHYAC----LIDLHGRSGKLEDALEILRTMPMKPSARIWSSLVSSCKLHGRLDIAES 565
Query: 243 LFE---RIPSKDVVSWG--TMIDG----YLQVERLSEALTMYRAMLCDGIA 284
L R + S+ +MI +L +E++ E + + R C G +
Sbjct: 566 LSSQLIRSEPNNAASYTLLSMIHAEKGRWLDIEQVRETMKLQRLRKCYGFS 616
>gi|357501951|ref|XP_003621264.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496279|gb|AES77482.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 519
Score = 311 bits (796), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 167/465 (35%), Positives = 262/465 (56%), Gaps = 34/465 (7%)
Query: 232 AKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIV 291
A + A +LF +IP D + MI G Q A+++Y M + +
Sbjct: 53 ATPTVTNYAHQLFAQIPQPDTFMYNVMIRGSSQSPNPLRAISLYTEMHRHFVKGDSYTFP 112
Query: 292 DLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKD 351
++ AC R G +H ++++ GF ++ T++ F+A CG +N+A F+ K
Sbjct: 113 FVLKACTRLFWVNTGSAVHGMVLRLGFGSNAVVRNTLLVFHAKCGDLNVATSLFDDSCKG 172
Query: 352 HIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQ-----------NEQP 400
+ +W++LIAG+ R G ++ AR+LFN M +RD+ SW+ MI+GY + +E P
Sbjct: 173 DVVAWSSLIAGYARRGDLKVARKLFNEMPERDLVSWNVMITGYVKQGEMESARMLFDEAP 232
Query: 401 --------------------NMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRW 440
ALELF+ M AGV P+E+T++S+ A A G L+ G+
Sbjct: 233 VKDVVSWNAMIAGYVVCGLSKQALELFNEMCRAGVFPDEVTLLSLLSACADLGDLENGKK 292
Query: 441 AHEYVLNNSI-TLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAM 499
H V+ S+ L+ L A+IDMYAKCG+I + +VF+ I D+ V WN++I G+A+
Sbjct: 293 VHAKVMEISMGKLSTLLGNALIDMYAKCGNIKESLDVFWSITDK--DVISWNSVIVGMAL 350
Query: 500 HGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLK 559
HG +L ++ +++ I N ITF+GVL C HAG +D G +YF M S Y +EP+++
Sbjct: 351 HGHGKESLSLFKMMQRTKICPNEITFVGVLVACSHAGEIDEGYKYFDLMSSEYKIEPNIR 410
Query: 560 HYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGL 619
H GCMVD+LGRAG L++A + I SM ++ + +IW TLLAA ++HG+VE+ + A + L +
Sbjct: 411 HCGCMVDMLGRAGLLKEAAKFIDSMKIEPNAIIWRTLLAACKVHGDVELAKVANEKLFSM 470
Query: 620 QPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
+ H VL+SN+YA G W+ A +RK M D G+ ++ G S V
Sbjct: 471 RKDHSGDYVLMSNLYASRGEWDGAEKVRKLMDDSGVTKIRGSSFV 515
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 112/496 (22%), Positives = 217/496 (43%), Gaps = 88/496 (17%)
Query: 43 QQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRN 102
+QIH+L+ +G +N L+ + S S + P A +
Sbjct: 19 KQIHALMIINGFNNNVNFLGDLV--------------LTISTSLVGPTATPTVT------ 58
Query: 103 DRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVI 162
N A ++F + P Y MI G +Q+ A+ ++ +M V + T V+
Sbjct: 59 ---NYAHQLFAQIPQPDTFMYNVMIRGSSQSPNPLRAISLYTEMHRHFVKGDSYTFPFVL 115
Query: 163 SSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIV 222
+ L + +HG+V++L ++ LL + C L A SLFD+ + ++V
Sbjct: 116 KACTRLFWVNTGSAVHGMVLRLGFGSNAVVRNTLLVFHAKCGDLNVATSLFDDSCKGDVV 175
Query: 223 SWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERL-------------- 268
+W+ ++ G+A+ G +++AR+LF +P +D+VSW MI GY++ +
Sbjct: 176 AWSSLIAGYARRGDLKVARKLFNEMPERDLVSWNVMITGYVKQGEMESARMLFDEAPVKD 235
Query: 269 -----------------SEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHS 311
+AL ++ M G+ P++V ++ L+SAC G ++H+
Sbjct: 236 VVSWNAMIAGYVVCGLSKQALELFNEMCRAGVFPDEVTLLSLLSACADLGDLENGKKVHA 295
Query: 312 IIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIED 371
+++ I++ +L LG NALI + + G I++
Sbjct: 296 KVME----------------------ISMGKLSTLLG--------NALIDMYAKCGNIKE 325
Query: 372 ARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIAS 431
+ +F ++ +DV SW+++I G A + +L LF M + PNEIT V V A +
Sbjct: 326 SLDVFWSITDKDVISWNSVIVGMALHGHGKESLSLFKMMQRTKICPNEITFVGVLVACSH 385
Query: 432 SGTLKEGRWAHEYVLNNSITLNDNLS--AAIIDMYAKCGSINTAFEVFYHIRDRTTSVSP 489
+G + EG + + ++++ + N+ ++DM + G + A + ++ ++
Sbjct: 386 AGEIDEG-YKYFDLMSSEYKIEPNIRHCGCMVDMLGRAGLLKEAAKFIDSMKIEPNAII- 443
Query: 490 WNAIICGLAMHGDANL 505
W ++ +HGD L
Sbjct: 444 WRTLLAACKVHGDVEL 459
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 105/230 (45%), Gaps = 34/230 (14%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGL-ESNTFIQNSLINLYAKCGLISQAKSMF 81
E+ L+S L C+ + G+++H+ + + + + +T + N+LI++YAKCG I ++ +F
Sbjct: 271 EVTLLSLLSACADLGDLENGKKVHAKVMEISMGKLSTLLGNALIDMYAKCGNIKESLDVF 330
Query: 82 DSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALE 141
S + D +S+ S+I+G A + +E+L
Sbjct: 331 WSITDKD-------------------------------VISWNSVIVGMALHGHGKESLS 359
Query: 142 VFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVI-KLMIDGFVIISTNLLNMY 200
+F+ M+ + PNE+T V+ + H G I E L+ + I+ + +++M
Sbjct: 360 LFKMMQRTKICPNEITFVGVLVACSHAGEIDEGYKYFDLMSSEYKIEPNIRHCGCMVDML 419
Query: 201 CVCSSLVEARSLFDEMK-ERNIVSWNVMLNGFAKAGLVELARELFERIPS 249
L EA D MK E N + W +L G VELA+ E++ S
Sbjct: 420 GRAGLLKEAAKFIDSMKIEPNAIIWRTLLAACKVHGDVELAKVANEKLFS 469
>gi|359475368|ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 891
Score = 311 bits (796), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 199/652 (30%), Positives = 323/652 (49%), Gaps = 104/652 (15%)
Query: 22 YELALVSALR---YCSAHI-----AVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGL 73
Y+L LVS +R Y + + G++IH FK G + N F+ SLI++Y++ G
Sbjct: 206 YQLLLVSEIRPDFYTFPPVLKACGTLVDGRKIHCWAFKLGFQWNVFVAASLIHMYSRFGF 265
Query: 74 ISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQN 133
A+S+F D P + S+ +MI G QN
Sbjct: 266 TGIARSLF-------------------------------DDMPFRDMGSWNAMISGLIQN 294
Query: 134 DCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIIS 193
+AL+V +MR+ G+ N VT+ S++ LG I ++H VIK ++ + +S
Sbjct: 295 GNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVS 354
Query: 194 TNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVV 253
L+NMY AK G +E AR+ F+++ DVV
Sbjct: 355 NALINMY-------------------------------AKFGNLEDARKAFQQMFITDVV 383
Query: 254 SWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSII 313
SW ++I Y Q + A + M +G P+ + +V L S ++ +H I
Sbjct: 384 SWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFI 443
Query: 314 VKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDAR 373
++ G+ D + NA++ + + G+++ A
Sbjct: 444 MRRGWLMEDVVIG------------------------------NAVVDMYAKLGLLDSAH 473
Query: 374 QLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAG-VKPNEITMVSVFCAIASS 432
++F + +DV SW+ +I+GYAQN + A+E++ M + + PN+ T VS+ A A
Sbjct: 474 KVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHV 533
Query: 433 GTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNA 492
G L++G H V+ ++ L+ ++ +ID+Y KCG + A +FY + ++ WNA
Sbjct: 534 GALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVT--WNA 591
Query: 493 IICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVY 552
II +HG A TLK++ ++ +K + +TF+ +LS C H+G V+ G+ F+ M+ Y
Sbjct: 592 IISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQE-Y 650
Query: 553 NVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERA 612
++P LKHYGCMVDLLGRAG LE A + I+ MP++ D IWG LL A RIHGN+E+G+ A
Sbjct: 651 GIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGACRIHGNIELGKFA 710
Query: 613 AKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
+ L + + VLLSNIYA+ G+WE +R R+ G+K+ PG+S +
Sbjct: 711 SDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTI 762
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 148/606 (24%), Positives = 261/606 (43%), Gaps = 111/606 (18%)
Query: 45 IHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDR 104
+H+L+ +G + FI L+NLYA G +S +
Sbjct: 138 LHALLVVAGKVQSIFISTRLVNLYANLGDVSLS--------------------------- 170
Query: 105 LNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVI-PNEVTLASVIS 163
R FD+ P K ++ SMI + N + EA+ F + ++ I P+ T V+
Sbjct: 171 ----RCTFDQIPQKDVYAWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLK 226
Query: 164 SSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVS 223
+ G + + R +H KL V ++ +L++MY ARSLFD+M R++ S
Sbjct: 227 AC---GTLVDGRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGS 283
Query: 224 WNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGI 283
WN M++G + G ++AL + M +GI
Sbjct: 284 WNAMISGLIQNG-------------------------------NAAQALDVLDEMRLEGI 312
Query: 284 APNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARL 343
N V +V ++ C + + IH ++K G + F+ +I+ YA G + AR
Sbjct: 313 KMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARK 372
Query: 344 QFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMA 403
F+ + SWN++IA Y QN+ P A
Sbjct: 373 AFQQMFITDVVSWNSIIA-------------------------------AYEQNDDPVTA 401
Query: 404 LELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLND-NLSAAIID 462
F M G +P+ +T+VS+ +A S K R H +++ + D + A++D
Sbjct: 402 HGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVD 461
Query: 463 MYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEK-RNIKLN 521
MYAK G +++A +VF I V WN +I G A +G A+ +++Y +E+ + I N
Sbjct: 462 MYAKLGLLDSAHKVFEII--PVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPN 519
Query: 522 SITFIGVLSTCCHAGLVDLGER-YFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEV 580
T++ +L H G + G + + + +K+ N+ D+ C++D+ G+ G+L DA +
Sbjct: 520 QGTWVSILPAYAHVGALQQGMKIHGRVIKT--NLHLDVFVATCLIDVYGKCGRLVDAMSL 577
Query: 581 IRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSL--AGLQPSHGPSRVLLS----NIY 634
+P ++ V W +++ IHG+ E + + G++P H LLS + +
Sbjct: 578 FYQVPQESSVT-WNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGF 636
Query: 635 ADAGRW 640
+ G+W
Sbjct: 637 VEEGKW 642
>gi|359492781|ref|XP_002278504.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 658
Score = 311 bits (796), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 169/530 (31%), Positives = 283/530 (53%), Gaps = 43/530 (8%)
Query: 137 REALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNL 196
+EAL V+ M+ L V N T ++ + + R++HG ++KL V + +L
Sbjct: 56 KEALRVYSRMKALMVEANSFTFTFLLKCFETSQALEDGRVIHGEILKLGFGSSVFVQNSL 115
Query: 197 LNMYCVCS-SLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSW 255
L Y CS +L A +F+EM ER+++SWN M++ + G ++ A L +++P +++V+W
Sbjct: 116 LGFYANCSENLGSAYRVFEEMPERDVISWNSMISAYMTRGEIQSAIGLLDKMPERNIVTW 175
Query: 256 GTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVK 315
+++ G + + A +++ M N+V +IS
Sbjct: 176 NSVVCGLSKAGNMELAHSVFEQMPLR----NEVSWNSMISG------------------- 212
Query: 316 AGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQL 375
Y G + A+ F + + SW A+I+G+ NG ++ A +
Sbjct: 213 ----------------YVRIGDVRAAQSIFYQMPEKTVVSWTAMISGYATNGDLKSAENI 256
Query: 376 FNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGM-VDAGVKPNEITMVSVFCAIASSGT 434
FN+M ++V SW+AMISGY N + + AL +FH M ++ +P++ T++S+ A A G+
Sbjct: 257 FNHMPVKNVVSWNAMISGYVHNHEFDQALCVFHHMLINGECRPDQTTLISILSACAHLGS 316
Query: 435 LKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAII 494
L+ G+W + Y+ N + L+ L A+IDM+AKCG + A EVF+H+ R + W ++
Sbjct: 317 LEHGKWINSYIKKNKLHLSIPLGNALIDMFAKCGDVENAKEVFHHMSKRC--IITWTTMV 374
Query: 495 CGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNV 554
GLA++G + ++ + K + + FI VLS C H GLV+ G+R F M + +
Sbjct: 375 SGLAVNGKCREAINLFDKMCLEGTKPDDVIFIAVLSACTHGGLVEEGKRVFDQMVQEFGI 434
Query: 555 EPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAK 614
+P ++HYGCMVDLLGRAG+LE+A M +K + VIW TLL +IHGN ++ + +
Sbjct: 435 KPRIEHYGCMVDLLGRAGKLEEAVRFTARMHLKPNAVIWATLLFCCKIHGNGDLLKSVTE 494
Query: 615 SLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
+ +PS+ L+SN+ A GRWED S R MR M+++PG S +
Sbjct: 495 KIMDQEPSNPSYLTLVSNLSASFGRWEDVLSFRVAMRQQRMEKVPGCSSI 544
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 122/532 (22%), Positives = 230/532 (43%), Gaps = 94/532 (17%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLI-------- 74
E ++ L++C + + +Q H IF GL+ + F+ LI + + L+
Sbjct: 2 EQKMLRILQHCKN---IRELKQTHLQIFIHGLQHSDFMLPKLITVSSAFNLLDYATHKEA 58
Query: 75 ----SQAKSM---------------FDSCSTLD----------------PVACNIMISGY 99
S+ K++ F++ L+ V + G+
Sbjct: 59 LRVYSRMKALMVEANSFTFTFLLKCFETSQALEDGRVIHGEILKLGFGSSVFVQNSLLGF 118
Query: 100 IRN--DRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIP--NE 155
N + L A VF++ P + +S+ SMI + E+ + +L +P N
Sbjct: 119 YANCSENLGSAYRVFEEMPERDVISWNSMISAYMTRG------EIQSAIGLLDKMPERNI 172
Query: 156 VTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDE 215
VT SV+ G + + H + ++ + V ++ +++ Y + A+S+F +
Sbjct: 173 VTWNSVVCGLSKAGNM---ELAHSVFEQMPLRNEVSWNS-MISGYVRIGDVRAAQSIFYQ 228
Query: 216 MKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMY 275
M E+ +VSW M++G+A G ++ A +F +P K+VVSW MI GY+ +AL ++
Sbjct: 229 MPEKTVVSWTAMISGYATNGDLKSAENIFNHMPVKNVVSWNAMISGYVHNHEFDQALCVF 288
Query: 276 RAMLCDG-IAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAA 334
ML +G P+ ++ ++SAC + G I+S I K
Sbjct: 289 HHMLINGECRPDQTTLISILSACAHLGSLEHGKWINSYIKK------------------- 329
Query: 335 CGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGY 394
N L LG NALI F + G +E+A+++F++M KR + +W+ M+SG
Sbjct: 330 ----NKLHLSIPLG--------NALIDMFAKCGDVENAKEVFHHMSKRCIITWTTMVSGL 377
Query: 395 AQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNN-SITLN 453
A N + A+ LF M G KP+++ ++V A G ++EG+ + ++ I
Sbjct: 378 AVNGKCREAINLFDKMCLEGTKPDDVIFIAVLSACTHGGLVEEGKRVFDQMVQEFGIKPR 437
Query: 454 DNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANL 505
++D+ + G + A + + +V W ++ +HG+ +L
Sbjct: 438 IEHYGCMVDLLGRAGKLEEAVRFTARMHLKPNAVI-WATLLFCCKIHGNGDL 488
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 101/257 (39%), Gaps = 72/257 (28%)
Query: 9 VFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLY 68
VF+ N + + L+S L C+ ++ G+ I+S I K+ L + + N+LI+++
Sbjct: 287 VFHHMLINGECRPDQTTLISILSACAHLGSLEHGKWINSYIKKNKLHLSIPLGNALIDMF 346
Query: 69 AKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIM 128
AKCG + AK +F S + M+SG N KC
Sbjct: 347 AKCGDVENAKEVFHHMSKRCIITWTTMVSGLAVNG--------------KC--------- 383
Query: 129 GFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDG 188
REA+ +F M + G P++V +V+S+ H GG+ E
Sbjct: 384 --------REAINLFDKMCLEGTKPDDVIFIAVLSACTH-GGLVE--------------- 419
Query: 189 FVIISTNLLNMYCVCSSLVEARSLFDEMKER-----NIVSWNVMLNGFAKAGLVELAREL 243
E + +FD+M + I + M++ +AG +E A
Sbjct: 420 -------------------EGKRVFDQMVQEFGIKPRIEHYGCMVDLLGRAGKLEEAVRF 460
Query: 244 FERIPSK-DVVSWGTMI 259
R+ K + V W T++
Sbjct: 461 TARMHLKPNAVIWATLL 477
>gi|356567222|ref|XP_003551820.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g39620-like [Glycine max]
Length = 887
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 186/628 (29%), Positives = 316/628 (50%), Gaps = 98/628 (15%)
Query: 39 VSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISG 98
+ +G+++H+ + G+ S+ + ++++YAKCG + +AK F S D V + +S
Sbjct: 344 LEKGKEVHNYALQLGMTSDIVVATPIVSMYAKCGELKKAKEFFLSLEGRDLVVWSAFLSA 403
Query: 99 YIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTL 158
++ G+ EAL +F++M+ G+ P++ L
Sbjct: 404 LVQ--------------------------AGYPG-----EALSIFQEMQHEGLKPDKTIL 432
Query: 159 ASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKE 218
+S++S+ + +M+H VIK + + ++T L++MY C S + A +LF+ M
Sbjct: 433 SSLVSACAEISSSRLGKMMHCYVIKADMGSDISVATTLVSMYTRCKSFMYAMTLFNRMHY 492
Query: 219 RNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAM 278
+++V+WN ++NGF K G LA E+F R+ +LS
Sbjct: 493 KDVVAWNTLINGFTKCGDPRLALEMFLRL-------------------QLS--------- 524
Query: 279 LCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRI 338
G+ P+ +V L+SAC G+ H I+K G + ++ +I YA CG +
Sbjct: 525 ---GVQPDSGTMVSLLSACALLDDLYLGICFHGNIIKNGIESEMHVKVALIDMYAKCGSL 581
Query: 339 NLARLQFELG--IKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQ 396
A F L +KD + SWN +IAG++ NG +A FN M+
Sbjct: 582 CTAENLFHLNKHVKDEV-SWNVMIAGYLHNGCANEAISTFNQMK---------------- 624
Query: 397 NEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNL 456
LE V+PN +T V++ A++ L+E H ++ + +
Sbjct: 625 -------LE--------SVRPNLVTFVTILPAVSYLSILREAMAFHACIIRMGFISSTLI 669
Query: 457 SAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKR 516
++IDMYAK G ++ + + F+ + ++ T WNA++ G AMHG + L ++S +++
Sbjct: 670 GNSLIDMYAKSGQLSYSEKCFHEMENKGT--ISWNAMLSGYAMHGQGEVALALFSLMQET 727
Query: 517 NIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLED 576
++ ++S+++I VLS C HAGL+ G F+SM +N+EP ++HY CMVDLLG AG ++
Sbjct: 728 HVPVDSVSYISVLSACRHAGLIQEGRNIFQSMTEKHNLEPSMEHYACMVDLLGCAGLFDE 787
Query: 577 AEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYAD 636
+I MP + D +WG LL A ++H NV++GE A L L+P + ++LS+IYA
Sbjct: 788 VLCLIDKMPTEPDAQVWGALLGACKMHSNVKLGEIALHHLLKLEPRNAVHYIVLSDIYAQ 847
Query: 637 AGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
GRW DA R M D G+K+ PG+S V
Sbjct: 848 CGRWIDARRTRSNMTDHGLKKNPGYSWV 875
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 158/655 (24%), Positives = 291/655 (44%), Gaps = 93/655 (14%)
Query: 17 LQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQ 76
L+ Y V L+ C+ + +G IH I LE + FI L+++Y K G +
Sbjct: 123 LEPDKYTFTFV--LKACTGALDFHEGVAIHQDIASRELECDVFIGTGLVDMYCKMGHLDN 180
Query: 77 AKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCW 136
A+ +FD D + N MISG + + N C
Sbjct: 181 ARKVFDKMPGKDVASWNAMISG-----------------------------LSQSSNPC- 210
Query: 137 REALEVFRDMRI-LGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTN 195
EALE+F+ M++ GV P+ V++ ++ + L + C+ +HG V++ + F ++S +
Sbjct: 211 -EALEIFQRMQMEEGVEPDSVSILNLAPAVSRLEDVDSCKSIHGYVVRRCV--FGVVSNS 267
Query: 196 LLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDV--- 252
L++MY C + A +FD+M ++ +SW M+ G+ G +L + + K +
Sbjct: 268 LIDMYSKCGEVKLAHQIFDQMWVKDDISWATMMAGYVHHGCYFEVLQLLDEMKRKHIKMN 327
Query: 253 -VSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVM---IVDLISACG---RAMAF-- 303
+S + + L + ++ L G+ + V+ IV + + CG +A F
Sbjct: 328 KISVVNSVLAATETRDLEKGKEVHNYALQLGMTSDIVVATPIVSMYAKCGELKKAKEFFL 387
Query: 304 -----------------------GEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINL 340
GE L I + G I ++++ +AC I+
Sbjct: 388 SLEGRDLVVWSAFLSALVQAGYPGEALSIFQEMQHEGLKPDKTILSSLV---SACAEISS 444
Query: 341 ARLQ-------FELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISG 393
+RL + + I+ L++ + R A LFN M +DV +W+ +I+G
Sbjct: 445 SRLGKMMHCYVIKADMGSDISVATTLVSMYTRCKSFMYAMTLFNRMHYKDVVAWNTLING 504
Query: 394 YAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLN 453
+ + P +ALE+F + +GV+P+ TMVS+ A A L G H ++ N I
Sbjct: 505 FTKCGDPRLALEMFLRLQLSGVQPDSGTMVSLLSACALLDDLYLGICFHGNIIKNGIESE 564
Query: 454 DNLSAAIIDMYAKCGSINTAFEVFY---HIRDRTTSVSPWNAIICGLAMHGDANLTLKIY 510
++ A+IDMYAKCGS+ TA +F+ H++D + WN +I G +G AN + +
Sbjct: 565 MHVKVALIDMYAKCGSLCTAENLFHLNKHVKDEVS----WNVMIAGYLHNGCANEAISTF 620
Query: 511 SDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGR 570
+ ++ +++ N +TF+ +L + ++ + + + + L ++D+ +
Sbjct: 621 NQMKLESVRPNLVTFVTILPAVSYLSILREAMAFHACIIRMGFISSTLIG-NSLIDMYAK 679
Query: 571 AGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGP 625
+GQL +E+ M K + W +L+ +HG GE A + +Q +H P
Sbjct: 680 SGQLSYSEKCFHEMENKG-TISWNAMLSGYAMHGQ---GEVALALFSLMQETHVP 730
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 124/521 (23%), Positives = 225/521 (43%), Gaps = 89/521 (17%)
Query: 123 YTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVI 182
+ S+I +++ ++EA++ ++ M +G+ P++ T V+ + E +H +
Sbjct: 95 WNSLIRAYSRLHLFQEAIKSYQTMSYMGLEPDKYTFTFVLKACTGALDFHEGVAIHQDIA 154
Query: 183 KLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARE 242
++ V I T L++MYC L AR +FD+M +++ SWN M++G +++ A E
Sbjct: 155 SRELECDVFIGTGLVDMYCKMGHLDNARKVFDKMPGKDVASWNAMISGLSQSSNPCEALE 214
Query: 243 LFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMA 302
+F+R +Q+E +G+ P+ V I++L A R
Sbjct: 215 IFQR----------------MQME--------------EGVEPDSVSILNLAPAVSRLED 244
Query: 303 FGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQF-ELGIKDHIASWNALIA 361
IH +V+ + + ++I Y+ CG + LA F ++ +KD I SW ++A
Sbjct: 245 VDSCKSIHGYVVRRCV--FGVVSNSLIDMYSKCGEVKLAHQIFDQMWVKDDI-SWATMMA 301
Query: 362 GFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEIT 421
G++ +G + QL + M+++ +K N+I+
Sbjct: 302 GYVHHGCYFEVLQLLDEMKRKH-------------------------------IKMNKIS 330
Query: 422 MVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIR 481
+V+ A + L++G+ H Y L +T + ++ I+ MYAKCG + A E F +
Sbjct: 331 VVNSVLAATETRDLEKGKEVHNYALQLGMTSDIVVATPIVSMYAKCGELKKAKEFFLSLE 390
Query: 482 DRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLG 541
R V W+A + L G L I+ +++ +K + ++S C LG
Sbjct: 391 GRDLVV--WSAFLSALVQAGYPGEALSIFQEMQHEGLKPDKTILSSLVSACAEISSSRLG 448
Query: 542 ERYFKSMKSVYNVEPDLKH----YGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLL 597
+ M Y ++ D+ +V + R A + M K DVV W TL
Sbjct: 449 K-----MMHCYVIKADMGSDISVATTLVSMYTRCKSFMYAMTLFNRMHYK-DVVAWNTL- 501
Query: 598 AASRIHGNVEVGE-RAA------KSLAGLQPSHGPSRVLLS 631
I+G + G+ R A L+G+QP G LLS
Sbjct: 502 ----INGFTKCGDPRLALEMFLRLQLSGVQPDSGTMVSLLS 538
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 88/362 (24%), Positives = 173/362 (47%), Gaps = 54/362 (14%)
Query: 247 IPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEG 306
I + ++ W ++I Y ++ EA+ Y+ M G+ P+ ++ AC A+ F EG
Sbjct: 87 ITNPSLILWNSLIRAYSRLHLFQEAIKSYQTMSYMGLEPDKYTFTFVLKACTGALDFHEG 146
Query: 307 LQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRN 366
+ IH I +C FI ++ Y +
Sbjct: 147 VAIHQDIASRELECDVFIGTGLVDMYC-------------------------------KM 175
Query: 367 GMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGM-VDAGVKPNEITMVSV 425
G +++AR++F+ M +DV SW+AMISG +Q+ P ALE+F M ++ GV+P+ ++++++
Sbjct: 176 GHLDNARKVFDKMPGKDVASWNAMISGLSQSSNPCEALEIFQRMQMEEGVEPDSVSILNL 235
Query: 426 FCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYH--IRDR 483
A++ + + H YV+ + +S ++IDMY+KCG + A ++F ++D
Sbjct: 236 APAVSRLEDVDSCKSIHGYVVRRCVF--GVVSNSLIDMYSKCGEVKLAHQIFDQMWVKDD 293
Query: 484 TTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGER 543
+ W ++ G HG L++ ++++++IK+N I+ + + L R
Sbjct: 294 IS----WATMMAGYVHHGCYFEVLQLLDEMKRKHIKMNKISVVNSV-------LAATETR 342
Query: 544 YFKSMKSVYN------VEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLL 597
+ K V+N + D+ +V + + G+L+ A+E S+ + D+V+W L
Sbjct: 343 DLEKGKEVHNYALQLGMTSDIVVATPIVSMYAKCGELKKAKEFFLSLEGR-DLVVWSAFL 401
Query: 598 AA 599
+A
Sbjct: 402 SA 403
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/233 (21%), Positives = 110/233 (47%), Gaps = 15/233 (6%)
Query: 377 NNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLK 436
N++ + W+++I Y++ A++ + M G++P++ T V A +
Sbjct: 85 NSITNPSLILWNSLIRAYSRLHLFQEAIKSYQTMSYMGLEPDKYTFTFVLKACTGALDFH 144
Query: 437 EGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICG 496
EG H+ + + + + + ++DMY K G ++ A +VF + + V+ WNA+I G
Sbjct: 145 EGVAIHQDIASRELECDVFIGTGLVDMYCKMGHLDNARKVFDKMPGK--DVASWNAMISG 202
Query: 497 LAMHGDANLTLKIYSDLE-KRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVE 555
L+ + L+I+ ++ + ++ +S++ + + VD S KS++
Sbjct: 203 LSQSSNPCEALEIFQRMQMEEGVEPDSVSILNLAPAVSRLEDVD-------SCKSIHGYV 255
Query: 556 PDLKHYGC----MVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHG 604
+G ++D+ + G+++ A ++ M +K D+ W T++A HG
Sbjct: 256 VRRCVFGVVSNSLIDMYSKCGEVKLAHQIFDQMWVKDDIS-WATMMAGYVHHG 307
Score = 46.2 bits (108), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 60/128 (46%), Gaps = 9/128 (7%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+ ++ A+ Y S + + H+ I + G S+T I NSLI++YAK G +S ++ F
Sbjct: 636 VTILPAVSYLSI---LREAMAFHACIIRMGFISSTLIGNSLIDMYAKSGQLSYSEKCFHE 692
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFD-----KTPIKCCVSYTSMIMGFAQNDCWRE 138
++ N M+SGY + + A +F P+ VSY S++ +E
Sbjct: 693 MENKGTISWNAMLSGYAMHGQGEVALALFSLMQETHVPVD-SVSYISVLSACRHAGLIQE 751
Query: 139 ALEVFRDM 146
+F+ M
Sbjct: 752 GRNIFQSM 759
>gi|222631044|gb|EEE63176.1| hypothetical protein OsJ_17985 [Oryza sativa Japonica Group]
Length = 745
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 202/657 (30%), Positives = 334/657 (50%), Gaps = 65/657 (9%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
L L+ C + G H LI +G ESN FI N+L+ +Y++CG + +A +FD
Sbjct: 10 HFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFD 69
Query: 83 SCSTL---DPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREA 139
+ D ++ N ++S ++++ A ++F K T ++ N+ R
Sbjct: 70 EITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKM--------TLIVHEKPTNE--RSD 119
Query: 140 LEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNM 199
+ +++ +++ + L + + + +HG I+ V + L++
Sbjct: 120 I---------------ISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDA 164
Query: 200 YCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELF-----ERIPSKDVVS 254
Y C + A +F+ M+ +++VSWN M+ G++++G + A ELF E IP D+V+
Sbjct: 165 YAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIP-LDMVT 223
Query: 255 WGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIV 314
W +I GY Q EAL ++R M+ G PN V I+ ++SAC AF +G++IH+ +
Sbjct: 224 WTAVIAGYSQRGCSHEALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSL 283
Query: 315 KAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDH-IASWNALIAGFIRNGMIEDAR 373
K +C L L + G +D + +NALI + + + AR
Sbjct: 284 K---NC-------------------LLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAAR 321
Query: 374 QLFNN--MQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDA--GVKPNEITMVSVFCAI 429
+F++ +++R+V +W+ MI G+AQ N AL+LF M+ GV PN T+ + A
Sbjct: 322 SIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMAC 381
Query: 430 ASSGTLKEGRWAHEYVLNNSITLNDNLSAA--IIDMYAKCGSINTAFEVFYHIRDRTTSV 487
A ++ G+ H YVL + + A +I+MY+KCG ++TA VF + + S
Sbjct: 382 AHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCGDVDTARHVFDSMSQK--SA 439
Query: 488 SPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKS 547
W +++ G MHG + L I+ + K + ITF+ VL C H G+VD G YF S
Sbjct: 440 ISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDS 499
Query: 548 MKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVE 607
M + Y + P +HY +DLL R G+L+ A + ++ MPM+ V+W LL+A R+H NVE
Sbjct: 500 MSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPMEPTAVVWVALLSACRVHSNVE 559
Query: 608 VGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
+ E A L + + S L+SNIYA AGRW+D IR M+ G+K+ PG S V
Sbjct: 560 LAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSWV 616
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 144/541 (26%), Positives = 249/541 (46%), Gaps = 89/541 (16%)
Query: 1 TPLDHFH--SVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNT 58
T LD F ++ +K + SD +++V+ L C + AV Q +++H ++G +
Sbjct: 97 TALDLFSKMTLIVHEKPTNERSDI-ISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDV 155
Query: 59 FIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVF-----D 113
F+ N+LI+ YAKCGL+ A +F+ D V+ N M++GY ++ A E+F +
Sbjct: 156 FVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKE 215
Query: 114 KTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWE 173
P+ V++T++I G++Q C EAL VFR M G +PN VT+ SV+S+ LG +
Sbjct: 216 NIPLD-MVTWTAVIAGYSQRGCSHEALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQ 274
Query: 174 CRMLHGLVIKLMI----------DGFVIISTNLLNMYCVCSSLVEARSLFDE--MKERNI 221
+H +K + D +++ L++MY C S ARS+FD+ ++ERN+
Sbjct: 275 GMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNV 334
Query: 222 VSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCD 281
V+W VM+ G A+ G A +LF VE +SE
Sbjct: 335 VTWTVMIGGHAQYGDSNDALKLF--------------------VEMISEPY--------- 365
Query: 282 GIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD----FIQATIIHFYAACGR 337
G+APN I ++ AC A G QIH+ +++ YD F+ +I+ Y+ CG
Sbjct: 366 GVAPNAYTISCILMACAHLAAIRIGKQIHAYVLR--HHQYDSSAYFVANCLINMYSKCGD 423
Query: 338 INLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQN 397
++ AR F+ + SW +++ G+ +G +A +F+ M+K
Sbjct: 424 VDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRK---------------- 467
Query: 398 EQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG-RWAHEYVLNNSITLNDNL 456
AG P++IT + V A + G + +G + + +T
Sbjct: 468 ---------------AGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEH 512
Query: 457 SAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKR 516
A ID+ A+ G ++ A++ + T+V W A++ +H + L + L +
Sbjct: 513 YAYAIDLLARFGRLDKAWKTVKDMPMEPTAVV-WVALLSACRVHSNVELAEHALNKLVEM 571
Query: 517 N 517
N
Sbjct: 572 N 572
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 80/377 (21%), Positives = 152/377 (40%), Gaps = 77/377 (20%)
Query: 278 MLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGR 337
ML G + + ++ ACG ++ G H +I GF+ FI ++ Y+ CG
Sbjct: 1 MLRAGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGS 60
Query: 338 INLARLQF----ELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISG 393
+ A + F + GI D + SWN++++ +++ A LF+ M + ++
Sbjct: 61 LEEASMIFDEITQRGIDD-VISWNSIVSAHVKSSNAWTALDLFSKM--------TLIVHE 111
Query: 394 YAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLN 453
NE+ ++ I++V++ A S + + + H + N L+
Sbjct: 112 KPTNERSDI-----------------ISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLD 154
Query: 454 DNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDL 513
+ A+ID YAKCG + A +VF + + V WNA++ G + G+ +++ ++
Sbjct: 155 VFVGNALIDAYAKCGLMENAVKVFNMMEFK--DVVSWNAMVAGYSQSGNFKAAFELFKNM 212
Query: 514 EKRNIKL-----------------------------------NSITFIGVLSTCCHAGLV 538
K NI L N +T I VLS C G
Sbjct: 213 RKENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQMIFSGSLPNCVTIISVLSACASLGAF 272
Query: 539 DLG-ERYFKSMKSVY--------NVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKA- 588
G E + S+K+ + DL Y ++D+ + + A + +P++
Sbjct: 273 SQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEER 332
Query: 589 DVVIWGTLLAASRIHGN 605
+VV W ++ +G+
Sbjct: 333 NVVTWTVMIGGHAQYGD 349
Score = 52.4 bits (124), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 92/215 (42%), Gaps = 11/215 (5%)
Query: 410 MVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGS 469
M+ AG + + T+ V A + + G H + N N + A++ MY++CGS
Sbjct: 1 MLRAGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGS 60
Query: 470 INTAFEVFYHIRDR-TTSVSPWNAIICGLAMHGDANLTLKIYSDL------EKRNIKLNS 522
+ A +F I R V WN+I+ +A L ++S + + N + +
Sbjct: 61 LEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDI 120
Query: 523 ITFIGVLSTCCHAGLV-DLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVI 581
I+ + +L C V E + ++++ D+ ++D + G +E+A +V
Sbjct: 121 ISIVNILPACGSLKAVPQTKEVHGNAIRN--GTFLDVFVGNALIDAYAKCGLMENAVKVF 178
Query: 582 RSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSL 616
M K DVV W ++A GN + K++
Sbjct: 179 NMMEFK-DVVSWNAMVAGYSQSGNFKAAFELFKNM 212
>gi|357131819|ref|XP_003567531.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Brachypodium distachyon]
Length = 822
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 210/721 (29%), Positives = 336/721 (46%), Gaps = 136/721 (18%)
Query: 13 QKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCG 72
Q+A+ + E L SALR C+ AVS GQQ+H + + GL+ N ++ +LINLYAK G
Sbjct: 104 QRASGGEAPNEFLLASALRACAQSRAVSFGQQVHGVAVRIGLDGNVYVGTALINLYAKVG 163
Query: 73 LISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQ 132
I + A VFD P+K V++T++I G++Q
Sbjct: 164 CI-------------------------------DAAMLVFDALPVKNPVTWTAVITGYSQ 192
Query: 133 NDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVII 192
ALE+F M + GV P+ LAS +S+ LG + R HG ++ ++ +
Sbjct: 193 IGQGGVALELFGKMGLDGVRPDRFVLASAVSACSALGFLEGGRQTHGYAYRIAVETDASV 252
Query: 193 STNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDV 252
L+++YC CS L AR LFD M+ RN+VSW
Sbjct: 253 INALIDLYCKCSRLSLARKLFDCMENRNLVSWT--------------------------- 285
Query: 253 VSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSI 312
TMI GY+Q +EA+ M+ + +G P+ ++++CG A +G Q+H+
Sbjct: 286 ----TMIAGYMQNSCDAEAMAMFWQLSQEGWQPDVFACASILNSCGSLAAIWQGRQVHAH 341
Query: 313 IVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDA 372
+KA + ++++ ++I YA C + AR FE +D S+NA+I G+ R G + A
Sbjct: 342 AIKANLESDEYVKNSLIDMYAKCEHLTEARAVFEALAEDDAISYNAMIEGYSRLGDLAGA 401
Query: 373 RQLFNNMQ---------------------------------------KRDVYSWSAMISG 393
+F+ M+ D+Y+ S++I
Sbjct: 402 IDVFSKMRYCSLKPSPLTFVSLLGVSSSQSAIELSKQIHGLIVKSGTSLDLYAGSSLIDV 461
Query: 394 YAQ-----------NEQPNMALELFHGMVDAGVKPNE---------------------IT 421
Y++ N N + +++ M+ G+ NE T
Sbjct: 462 YSKFSLVEDAKAVFNLMHNRDMVIWNAMI-FGLAQNEQGEEAVKLFNQLQVSGLAPNEFT 520
Query: 422 MVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIR 481
V++ ++ ++ G+ H ++ + ++S A+IDMYAKCG I +F
Sbjct: 521 FVALVTVASTLVSMFHGQQFHAQIIKAGADSDHHVSNALIDMYAKCGFIKEGRLLFESTL 580
Query: 482 DRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLG 541
+ V WN++I A HG A L ++ + ++ N +TF+GVLS C HAGLVD G
Sbjct: 581 GK--DVICWNSMISTYAQHGQAEEALYVFRMMGGTGVEPNYVTFVGVLSACAHAGLVDEG 638
Query: 542 ERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASR 601
R+F MK+ Y +EP +HY +V+L GR+G+L A+E I MP++ +W +LL+A
Sbjct: 639 LRHFDFMKTKYAIEPGTEHYASVVNLFGRSGKLHAAKEFIERMPIEPAAAVWRSLLSACH 698
Query: 602 IHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGF 661
+ GNVE+G A + P+ VL+SNIYA G W DA +R+ M G+ + PG+
Sbjct: 699 LFGNVEIGRYATEMALLADPADSGPSVLMSNIYASRGLWSDAQKLRQGMDCAGVVKEPGY 758
Query: 662 S 662
S
Sbjct: 759 S 759
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/364 (25%), Positives = 174/364 (47%), Gaps = 40/364 (10%)
Query: 225 NVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAM--LCDG 282
N++L ++K G V AR LF+R+P K++VSWG+ I + Q +A+ ++ A G
Sbjct: 50 NLLLRAYSKLGRVRDARRLFDRMPHKNLVSWGSAISMHAQHGCEEDAVALFAAFQRASGG 109
Query: 283 IAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLAR 342
APN+ ++ + AC ++ A G Q+H + V+ G D ++ +I+ YA G I+ A
Sbjct: 110 EAPNEFLLASALRACAQSRAVSFGQQVHGVAVRIGLDGNVYVGTALINLYAKVGCIDAAM 169
Query: 343 LQFE-LGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPN 401
L F+ L +K+ + +W A+I +GY+Q Q
Sbjct: 170 LVFDALPVKNPV-TWTAVI-------------------------------TGYSQIGQGG 197
Query: 402 MALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAII 461
+ALELF M GV+P+ + S A ++ G L+ GR H Y ++ + ++ A+I
Sbjct: 198 VALELFGKMGLDGVRPDRFVLASAVSACSALGFLEGGRQTHGYAYRIAVETDASVINALI 257
Query: 462 DMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLN 521
D+Y KC ++ A ++F + +R ++ W +I G + + ++ L + + +
Sbjct: 258 DLYCKCSRLSLARKLFDCMENR--NLVSWTTMIAGYMQNSCDAEAMAMFWQLSQEGWQPD 315
Query: 522 SITFIGVLSTCCHAGLVDLGER-YFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEV 580
+L++C + G + + ++K+ N+E D ++D+ + L +A V
Sbjct: 316 VFACASILNSCGSLAAIWQGRQVHAHAIKA--NLESDEYVKNSLIDMYAKCEHLTEARAV 373
Query: 581 IRSM 584
++
Sbjct: 374 FEAL 377
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 113/246 (45%), Gaps = 10/246 (4%)
Query: 357 NALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDA--G 414
N L+ + + G + DAR+LF+ M +++ SW + IS +AQ+ A+ LF A G
Sbjct: 50 NLLLRAYSKLGRVRDARRLFDRMPHKNLVSWGSAISMHAQHGCEEDAVALFAAFQRASGG 109
Query: 415 VKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAF 474
PNE + S A A S + G+ H + + N + A+I++YAK G I+ A
Sbjct: 110 EAPNEFLLASALRACAQSRAVSFGQQVHGVAVRIGLDGNVYVGTALINLYAKVGCIDAAM 169
Query: 475 EVFYHIRDRTTSVSP--WNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTC 532
VF D +P W A+I G + G + L+++ + ++ + +S C
Sbjct: 170 LVF----DALPVKNPVTWTAVITGYSQIGQGGVALELFGKMGLDGVRPDRFVLASAVSAC 225
Query: 533 CHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVI 592
G ++ G R VE D ++DL + +L A ++ M + ++V
Sbjct: 226 SALGFLE-GGRQTHGYAYRIAVETDASVINALIDLYCKCSRLSLARKLFDCMENR-NLVS 283
Query: 593 WGTLLA 598
W T++A
Sbjct: 284 WTTMIA 289
>gi|356558231|ref|XP_003547411.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 1135
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 205/653 (31%), Positives = 320/653 (49%), Gaps = 96/653 (14%)
Query: 24 LALVSALRYCSAHI--AVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMF 81
LVS CS H+ V G+Q+H+ ++G + T+ N+L+ +YA+ G
Sbjct: 434 FTLVSVAHACS-HVRGGVRLGKQVHAYTLRNG-DLRTYTNNALVTMYARLG--------- 482
Query: 82 DSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALE 141
R+NDA+ +F K VS+ ++I +QND + EAL
Sbjct: 483 ----------------------RVNDAKALFGVFDGKDLVSWNTVISSLSQNDRFEEALM 520
Query: 142 VFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIK---LMIDGFVIISTNLLN 198
M + GV P+ VTLASV+ + L + R +H ++ L+ + FV T L++
Sbjct: 521 YVYLMIVDGVRPDGVTLASVLPACSQLERLRIGREIHCYALRNGDLIENSFV--GTALVD 578
Query: 199 MYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTM 258
MYC C + R +FD + R + WN +L G+A+ + A LF
Sbjct: 579 MYCNCKQPKKGRLVFDGVVRRTVAVWNALLAGYARNEFDDQALRLF-------------- 624
Query: 259 IDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGF 318
VE +SE+ PN ++ AC R F + IH IVK GF
Sbjct: 625 ------VEMISES----------EFCPNATTFASVLPACVRCKVFSDKEGIHGYIVKRGF 668
Query: 319 DCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNN 378
++Q ++ Y+ GR+ +++ F K I SWN +I G I G +DA L +
Sbjct: 669 GKDKYVQNALMDMYSRMGRVEISKTIFGRMNKRDIVSWNTMITGCIVCGRYDDALNLLHE 728
Query: 379 MQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGV--KPNEITMVSVFCAIASSGTLK 436
MQ+R S Y D GV KPN +T+++V A+ L
Sbjct: 729 MQRRQGEDGSDTFVDYED---------------DGGVPFKPNSVTLMTVLPGCAALAALG 773
Query: 437 EGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICG 496
+G+ H Y + + ++ + +A++DMYAKCG +N A VF + R +V WN +I
Sbjct: 774 KGKEIHAYAVKQKLAMDVAVGSALVDMYAKCGCLNLASRVFDQMPIR--NVITWNVLIMA 831
Query: 497 LAMHGDANLTLKIYSDL------EKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKS 550
MHG L+++ + + I+ N +T+I + + C H+G+VD G F +MK+
Sbjct: 832 YGMHGKGEEALELFRIMTAGGGSNREVIRPNEVTYIAIFAACSHSGMVDEGLHLFHTMKA 891
Query: 551 VYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVV-IWGTLLAASRIHGNVEVG 609
+ VEP HY C+VDLLGR+G++++A E+I +MP + V W +LL A RIH +VE G
Sbjct: 892 SHGVEPRGDHYACLVDLLGRSGRVKEAYELINTMPSNLNKVDAWSSLLGACRIHQSVEFG 951
Query: 610 ERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
E AAK L L+P+ VL+SNIY+ AG W+ A +RK+M++ G+++ PG S
Sbjct: 952 EIAAKHLFVLEPNVASHYVLMSNIYSSAGLWDQALGVRKKMKEMGVRKEPGCS 1004
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 146/610 (23%), Positives = 247/610 (40%), Gaps = 127/610 (20%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSG--LESNTFIQNSLINLYAKCGLISQAKSMF 81
A + L+ +A + G+QIH+ +FK G S+ + NSL+N+Y KCG
Sbjct: 331 FAFPAVLKAAAAVHDLCLGKQIHAHVFKFGHAPPSSVAVANSLVNMYGKCG--------- 381
Query: 82 DSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALE 141
L AR+VFD P + VS+ SMI + + W +L
Sbjct: 382 ----------------------DLTAARQVFDDIPDRDHVSWNSMIATLCRFEEWELSLH 419
Query: 142 VFRDMRILGVIPNEVTLASVISSSVHL-GGIWECRMLHGLVIKLMIDGFVIISTN--LLN 198
+FR M V P TL SV + H+ GG+ + +H ++ +G + TN L+
Sbjct: 420 LFRLMLSENVDPTSFTLVSVAHACSHVRGGVRLGKQVHAYTLR---NGDLRTYTNNALVT 476
Query: 199 MYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTM 258
MY + +A++LF +++VSWN T+
Sbjct: 477 MYARLGRVNDAKALFGVFDGKDLVSWN-------------------------------TV 505
Query: 259 IDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGF 318
I Q +R EAL M+ DG+ P+ V + ++ AC + G +IH ++ G
Sbjct: 506 ISSLSQNDRFEEALMYVYLMIVDGVRPDGVTLASVLPACSQLERLRIGREIHCYALRNG- 564
Query: 319 DCYD--FIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLF 376
D + F+ ++ Y C + RL F+ ++ +A WNAL+AG+ RN + A +LF
Sbjct: 565 DLIENSFVGTALVDMYCNCKQPKKGRLVFDGVVRRTVAVWNALLAGYARNEFDDQALRLF 624
Query: 377 NNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLK 436
M + ++ PN T SV A
Sbjct: 625 VEM------------------------------ISESEFCPNATTFASVLPACVRCKVFS 654
Query: 437 EGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICG 496
+ H Y++ + + A++DMY++ G + + +F + R + WN +I G
Sbjct: 655 DKEGIHGYIVKRGFGKDKYVQNALMDMYSRMGRVEISKTIFGRMNKR--DIVSWNTMITG 712
Query: 497 LAMHGDANLTLKIYSDLEKRN------------------IKLNSITFIGVLSTCCHAGLV 538
+ G + L + ++++R K NS+T + VL C A L
Sbjct: 713 CIVCGRYDDALNLLHEMQRRQGEDGSDTFVDYEDDGGVPFKPNSVTLMTVLPGC--AALA 770
Query: 539 DLGE-RYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLL 597
LG+ + + + D+ +VD+ + G L A V MP++ +V+ W L+
Sbjct: 771 ALGKGKEIHAYAVKQKLAMDVAVGSALVDMYAKCGCLNLASRVFDQMPIR-NVITWNVLI 829
Query: 598 AASRIHGNVE 607
A +HG E
Sbjct: 830 MAYGMHGKGE 839
>gi|224080297|ref|XP_002306087.1| predicted protein [Populus trichocarpa]
gi|222849051|gb|EEE86598.1| predicted protein [Populus trichocarpa]
Length = 677
Score = 310 bits (794), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 193/640 (30%), Positives = 337/640 (52%), Gaps = 19/640 (2%)
Query: 38 AVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMIS 97
++ G H KSG N L++LY+K LI++A+ +FD + + N +IS
Sbjct: 3 SLKDGLMRHVRSIKSGFTLPILTSNQLVHLYSKHCLINEAQKLFDEMPQRNTYSWNTIIS 62
Query: 98 GYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCW-REALEVFRDMRIL--GVIPN 154
+I++ L A+ +FD ++ V+Y SM+ G+ D + R ALE+F +M+ + +
Sbjct: 63 AHIKSQNLAQAKSIFDSASVRDLVTYNSMLSGYVSVDGYERNALELFVEMQSKRNEIEID 122
Query: 155 EVTLASVISSSVHLGGIWECRMLHGLVIKLMID--GFVIISTNLLNMYCVCSSLVEARSL 212
++T+ S+++ L R LH ++K D GFV+ ++L++MY C EA +
Sbjct: 123 DLTITSMVNLFSKLCNSCYGRQLHSYMVKTGNDRSGFVV--SSLIDMYSKCGCFKEACQV 180
Query: 213 FDEMKER---NIVSWNVMLNGFAKAGLVELARELFERIPS-KDVVSWGTMIDGYLQVERL 268
F + ++VS N M+ + + G +E+A LF R D VSW T+I GY+Q
Sbjct: 181 FKGCEREGGFDLVSKNAMVAAYCREGDMEMALRLFWRESELNDSVSWNTLISGYVQNGYP 240
Query: 269 SEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATI 328
EAL ++ M +G+ N+ ++SAC G ++H+ I+K G F+++ I
Sbjct: 241 VEALKLFVCMGENGVKWNEHTFGSVLSACADLRNLKIGKEMHAWILKNGLGSSAFVESGI 300
Query: 329 IHFYAACGRINLAR-LQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSW 387
+ Y CG + A L G++ S ++I G+ G + +A +LF+++++++ W
Sbjct: 301 VDVYCKCGNMKYAESLHLTRGVRSSF-SITSMIVGYSSQGNMVEACRLFDSLEEKNSIVW 359
Query: 388 SAMISGYAQNEQPNMALELFHGMV--DAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYV 445
+A+ SGY + +Q EL + +A + P+ + +++ F A L G+ H YV
Sbjct: 360 AALFSGYVKLKQCEAFFELLREYIAKEAAI-PDALILINAFNVCAFQAALGPGKQIHGYV 418
Query: 446 LNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANL 505
I ++ + A+IDMY+KCGSI A ++F + +R + +N ++ G A HG
Sbjct: 419 FRMGIEMDMKTTTAMIDMYSKCGSIPYAEKLFLKVIERDLVL--YNVMLAGYAHHGHEIK 476
Query: 506 TLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMV 565
+ ++ ++ +R + +++TF+ +LS C H GLVDLGE+ F SM Y++ P+ HY CM+
Sbjct: 477 AINLFQEMLERGVGPDAVTFVALLSACRHRGLVDLGEKTFYSMTEDYHILPETDHYACMI 536
Query: 566 DLLGRAGQLEDAEEVIRSMPMK-ADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHG 624
DL GRA QLE ++ +P++ D + G A R++ N E+ + A + L ++ G
Sbjct: 537 DLYGRASQLEKMVLFMQRIPVEHQDAAVVGAFFNACRLNNNTELAKEAEEKLLNIEGDSG 596
Query: 625 PSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
V L+N+YA G W + I +EMR K+ G S V
Sbjct: 597 ARYVQLANVYAAEGNWAEMGRISREMRGKEAKKFAGCSWV 636
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 129/276 (46%), Gaps = 32/276 (11%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E S L C+ + G+++H+ I K+GL S+ F+++ ++++Y KCG + A+S+
Sbjct: 259 EHTFGSVLSACADLRNLKIGKEMHAWILKNGLGSSAFVESGIVDVYCKCGNMKYAESLHL 318
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+ + MI GY + +A +FD K + + ++ G+ + E+
Sbjct: 319 TRGVRSSFSITSMIVGYSSQGNMVEACRLFDSLEEKNSIVWAALFSGYVKLKQCEAFFEL 378
Query: 143 FRD-MRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYC 201
R+ + IP+ + L + + + + +HG V ++ I+ + +T +++MY
Sbjct: 379 LREYIAKEAAIPDALILINAFNVCAFQAALGPGKQIHGYVFRMGIEMDMKTTTAMIDMYS 438
Query: 202 VCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDG 261
C S+ A LF ++ ER++V +NVML G+A G E+
Sbjct: 439 KCGSIPYAEKLFLKVIERDLVLYNVMLAGYAHHG-----HEI------------------ 475
Query: 262 YLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISAC 297
+A+ +++ ML G+ P+ V V L+SAC
Sbjct: 476 --------KAINLFQEMLERGVGPDAVTFVALLSAC 503
>gi|224131262|ref|XP_002328495.1| predicted protein [Populus trichocarpa]
gi|222838210|gb|EEE76575.1| predicted protein [Populus trichocarpa]
Length = 580
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 166/443 (37%), Positives = 255/443 (57%), Gaps = 6/443 (1%)
Query: 225 NVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIA 284
N ++ + + GLV LA ++FE++PS D+VS+ MI GY + EA+ ++ M+ G+
Sbjct: 102 NTLIKVYLENGLVRLAHQVFEKMPSPDIVSFNVMIVGYAKKGFGLEAMRLFHEMVGLGLE 161
Query: 285 PNDVMIVDLISACGRAMAFGEGLQIHSIIV--KAGFDCYDFIQATIIHFYAACGRINLAR 342
P++ I+ L+ +CG+ G +H + K + ++ Y C ++ LA
Sbjct: 162 PDEFTILGLLVSCGQLGNVKFGKAVHGWMERRKPTISSNLILGNALLDMYVKCQKVELAL 221
Query: 343 LQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNM 402
F + I SWN ++AG + G +E AR F M RD+ SW+++++GYA
Sbjct: 222 RTFGALKEKDIVSWNMIVAGCAKVGELEQARLFFYQMPCRDIVSWNSLVTGYACRGDFAS 281
Query: 403 ALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIID 462
EL MV V P+ +TM+S+ A SG L +GRWAH +V+ I L+ L +A+ID
Sbjct: 282 VKELIVDMVMEKVIPDTVTMISLVSAATESGALDQGRWAHGWVIRMQIKLDAFLGSALID 341
Query: 463 MYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNS 522
MY KCGSI A VF I + +V W +I GLA HG + L+++S++++ ++ +
Sbjct: 342 MYCKCGSIERASRVFKEINKKDVTV--WTTMITGLAFHGYGSKALELFSEMQE-DVSPDD 398
Query: 523 ITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIR 582
+TF+ VLS C H+GLVD G + F SM Y +EP ++HYGC+VDLL R+G+L +A+++I
Sbjct: 399 VTFVSVLSACSHSGLVDQGIKVFSSMTD-YGIEPGVEHYGCLVDLLARSGRLSEAKDIID 457
Query: 583 SMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWED 642
MPMK IWG +L A + G+VE+ E A++ L L P LLSNIYA +GRW
Sbjct: 458 QMPMKPSRSIWGAMLNACQAQGDVELAEIASRELLNLDPEEEGGYTLLSNIYAASGRWSY 517
Query: 643 AFSIRKEMRDCGMKRLPGFSGVV 665
+ IR+ M G+K+ G S VV
Sbjct: 518 SKKIRETMESRGVKKTAGCSSVV 540
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 123/469 (26%), Positives = 212/469 (45%), Gaps = 66/469 (14%)
Query: 39 VSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISG 98
+SQ +QIH +GL S ++QN+LI +Y + GL+
Sbjct: 79 ISQVKQIHCQAIVTGLFSFGYLQNTLIKVYLENGLV------------------------ 114
Query: 99 YIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTL 158
RL A +VF+K P VS+ MI+G+A+ EA+ +F +M LG+ P+E T+
Sbjct: 115 -----RL--AHQVFEKMPSPDIVSFNVMIVGYAKKGFGLEAMRLFHEMVGLGLEPDEFTI 167
Query: 159 ASVISSSVHLGGIWECRMLHGLV--IKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEM 216
++ S LG + + +HG + K I +I+ LL+MY C + A F +
Sbjct: 168 LGLLVSCGQLGNVKFGKAVHGWMERRKPTISSNLILGNALLDMYVKCQKVELALRTFGAL 227
Query: 217 KERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYR 276
KE++IVSWN+++ G AK G +E AR F ++P +D+VSW +++ GY + +
Sbjct: 228 KEKDIVSWNMIVAGCAKVGELEQARLFFYQMPCRDIVSWNSLVTGYACRGDFASVKELIV 287
Query: 277 AMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACG 336
M+ + + P+ V ++ L+SA + A +G H +++ F+ + +I Y CG
Sbjct: 288 DMVMEKVIPDTVTMISLVSAATESGALDQGRWAHGWVIRMQIKLDAFLGSALIDMYCKCG 347
Query: 337 RINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQ 396
I A F+ K + W +I G +G A +LF+ MQ+
Sbjct: 348 SIERASRVFKEINKKDVTVWTTMITGLAFHGYGSKALELFSEMQED-------------- 393
Query: 397 NEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNL 456
V P+++T VSV A + SG + +G + + I
Sbjct: 394 ------------------VSPDDVTFVSVLSACSHSGLVDQGIKVFSSMTDYGIEPGVEH 435
Query: 457 SAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANL 505
++D+ A+ G ++ A ++ + + S S W A++ GD L
Sbjct: 436 YGCLVDLLARSGRLSEAKDIIDQMPMK-PSRSIWGAMLNACQAQGDVEL 483
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 94/401 (23%), Positives = 184/401 (45%), Gaps = 40/401 (9%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLI--FKSGLESNTFIQNSLINLYAKCGLISQAKSM 80
E ++ L C V G+ +H + K + SN + N+L+++Y KC + A
Sbjct: 164 EFTILGLLVSCGQLGNVKFGKAVHGWMERRKPTISSNLILGNALLDMYVKCQKVELALRT 223
Query: 81 FDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREAL 140
F + D V+ N++++G + L AR F + P + VS+ S++ G+A +
Sbjct: 224 FGALKEKDIVSWNMIVAGCAKVGELEQARLFFYQMPCRDIVSWNSLVTGYACRGDFASVK 283
Query: 141 EVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMY 200
E+ DM + VIP+ VT+ S++S++ G + + R HG VI++ I + + L++MY
Sbjct: 284 ELIVDMVMEKVIPDTVTMISLVSAATESGALDQGRWAHGWVIRMQIKLDAFLGSALIDMY 343
Query: 201 CVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMID 260
C C S+ A +F E+ ++++ W M+ G A G A ELF +
Sbjct: 344 CKCGSIERASRVFKEINKKDVTVWTTMITGLAFHGYGSKALELFSEMQ------------ 391
Query: 261 GYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDC 320
+ ++P+DV V ++SAC + +G+++ S + G +
Sbjct: 392 --------------------EDVSPDDVTFVSVLSACSHSGLVDQGIKVFSSMTDYGIEP 431
Query: 321 YDFIQATIIHFYAACGRINLAR-LQFELGIKDHIASWNALIAGFIRNGMIEDA----RQL 375
++ A GR++ A+ + ++ +K + W A++ G +E A R+L
Sbjct: 432 GVEHYGCLVDLLARSGRLSEAKDIIDQMPMKPSRSIWGAMLNACQAQGDVELAEIASREL 491
Query: 376 FNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVK 416
N+ + ++ + + YA + + + + ++ M GVK
Sbjct: 492 L-NLDPEEEGGYTLLSNIYAASGRWSYSKKIRETMESRGVK 531
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 96/459 (20%), Positives = 188/459 (40%), Gaps = 77/459 (16%)
Query: 237 VELARELFERI-PSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLIS 295
++LA LF P+ ++ + T+I + ++++ E+ +Y +L G P+ ++ L+
Sbjct: 16 LDLAITLFNHFTPNPNLFIYNTLISAFSSLKKI-ESFYLYNVLLSSGECPDKQTLLYLLQ 74
Query: 296 ACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIAS 355
A + QIH + G + ++Q T+I Y G + LA FE I S
Sbjct: 75 AVN---FISQVKQIHCQAIVTGLFSFGYLQNTLIKVYLENGLVRLAHQVFEKMPSPDIVS 131
Query: 356 WNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGV 415
+N +I G+ + G + A+ LFH MV G+
Sbjct: 132 FNVMIVGYAKKGFGLE-------------------------------AMRLFHEMVGLGL 160
Query: 416 KPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDN--LSAAIIDMYAKCGSINTA 473
+P+E T++ + + G +K G+ H ++ T++ N L A++DMY KC + A
Sbjct: 161 EPDEFTILGLLVSCGQLGNVKFGKAVHGWMERRKPTISSNLILGNALLDMYVKCQKVELA 220
Query: 474 FEVFYHIRDRTT-----------------------------SVSPWNAIICGLAMHGDAN 504
F ++++ + WN+++ G A GD
Sbjct: 221 LRTFGALKEKDIVSWNMIVAGCAKVGELEQARLFFYQMPCRDIVSWNSLVTGYACRGDFA 280
Query: 505 LTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCM 564
++ D+ + +++T I ++S +G +D G R+ ++ D +
Sbjct: 281 SVKELIVDMVMEKVIPDTVTMISLVSAATESGALDQG-RWAHGWVIRMQIKLDAFLGSAL 339
Query: 565 VDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHG 624
+D+ + G +E A V + + K DV +W T++ HG G +A + + +Q
Sbjct: 340 IDMYCKCGSIERASRVFKEIN-KKDVTVWTTMITGLAFHG---YGSKALELFSEMQEDVS 395
Query: 625 PSRVLLSNIY---ADAGRWEDAFSIRKEMRDCGMKRLPG 660
P V ++ + +G + + M D G++ PG
Sbjct: 396 PDDVTFVSVLSACSHSGLVDQGIKVFSSMTDYGIE--PG 432
>gi|357494311|ref|XP_003617444.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518779|gb|AET00403.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 542
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 168/438 (38%), Positives = 261/438 (59%), Gaps = 7/438 (1%)
Query: 232 AKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIV 291
+ +G + A +LF R+P+ ++ SW T+I + + A++++ ML I P +
Sbjct: 72 SPSGNINYAYKLFVRMPNPNLYSWNTIIRAFSRSSTPQFAISLFVDMLYSQIQPQYLTYP 131
Query: 292 DLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFE---LG 348
+ A + G Q+H +VK G FI TII+ YA G ++ AR F+ L
Sbjct: 132 SVFKAYAQLGHAHYGAQLHGRVVKLGLQNDQFICNTIIYMYANGGLMSEARRVFDGKKLE 191
Query: 349 IKDH-IASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELF 407
+ DH + + N++I G+ + G I+++R LF++M R SW++MISGY +N + ALELF
Sbjct: 192 LYDHDVVAINSMIMGYAKCGEIDESRNLFDDMITRTSVSWNSMISGYVRNGKLMEALELF 251
Query: 408 HGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKC 467
+ M G + +E TMVS+ A A G L+ G+W H+Y+ N LN + AIIDMY KC
Sbjct: 252 NKMQVEGFEVSEFTMVSLLNACAHLGALQHGKWVHDYIKRNHFELNVIVVTAIIDMYCKC 311
Query: 468 GSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNI-KLNSITFI 526
GS+ A EVF R +S WN+II GLAM+G + +S LE + K +S++FI
Sbjct: 312 GSVENAVEVFETCPRR--GLSCWNSIIIGLAMNGHEREAFEFFSKLESSKLLKPDSVSFI 369
Query: 527 GVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPM 586
GVL+ C H G ++ YF+ M + Y +EP +KHY C+VD+LG+AG LE+AEE+I+ MP+
Sbjct: 370 GVLTACKHLGAINKARDYFELMMNKYEIEPSIKHYTCIVDVLGQAGLLEEAEELIKGMPL 429
Query: 587 KADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSI 646
K D +IWG+LL++ R H NV++ RAA+ + L PS VL+SN++A + ++E+A
Sbjct: 430 KPDAIIWGSLLSSCRKHRNVQIARRAAQRVYELNPSDASGYVLMSNVHAASNKFEEAIEQ 489
Query: 647 RKEMRDCGMKRLPGFSGV 664
R M++ ++ PG S +
Sbjct: 490 RLLMKENLTEKEPGCSSI 507
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 122/540 (22%), Positives = 229/540 (42%), Gaps = 87/540 (16%)
Query: 86 TLDPVACNIMISGYIR-NDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFR 144
TL+P+A ++ + +N A ++F + P S+ ++I F+++ + A+ +F
Sbjct: 57 TLNPIASTRALTFCASPSGNINYAYKLFVRMPNPNLYSWNTIIRAFSRSSTPQFAISLFV 116
Query: 145 DMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCS 204
DM + P +T SV + LG LHG V+KL + I ++ MY
Sbjct: 117 DMLYSQIQPQYLTYPSVFKAYAQLGHAHYGAQLHGRVVKLGLQNDQFICNTIIYMYANGG 176
Query: 205 SLVEARSLFD----EMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMID 260
+ EAR +FD E+ + ++V+ N M+ G+AK G ++ +R LF+ + ++ VSW +MI
Sbjct: 177 LMSEARRVFDGKKLELYDHDVVAINSMIMGYAKCGEIDESRNLFDDMITRTSVSWNSMIS 236
Query: 261 GYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDC 320
GY++ +L EAL ++ M +G ++ +V L++AC A G +H I + F+
Sbjct: 237 GYVRNGKLMEALELFNKMQVEGFEVSEFTMVSLLNACAHLGALQHGKWVHDYIKRNHFEL 296
Query: 321 YDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ 380
+ II Y CG + A FE + ++ WN++I G NG +A + F+ ++
Sbjct: 297 NVIVVTAIIDMYCKCGSVENAVEVFETCPRRGLSCWNSIIIGLAMNGHEREAFEFFSKLE 356
Query: 381 KRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRW 440
+ +KP+ ++ + V A G + + R
Sbjct: 357 SSKL------------------------------LKPDSVSFIGVLTACKHLGAINKARD 386
Query: 441 AHEYVLNN-SITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAM 499
E ++N I + I+D+ + G + A E +I G+ +
Sbjct: 387 YFELMMNKYEIEPSIKHYTCIVDVLGQAGLLEEAEE-----------------LIKGMPL 429
Query: 500 HGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEP-DL 558
DA I + +LS+C V + R + + VY + P D
Sbjct: 430 KPDA-------------------IIWGSLLSSCRKHRNVQIARR---AAQRVYELNPSDA 467
Query: 559 KHYGCMVDLLGRAGQLEDA--------EEVIRSMPMKADVVIWGTL---LAASRIHGNVE 607
Y M ++ + + E+A E + P + + ++G + +A R+H +
Sbjct: 468 SGYVLMSNVHAASNKFEEAIEQRLLMKENLTEKEPGCSSIELYGEVHEFIAGGRLHPKTQ 527
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 98/379 (25%), Positives = 167/379 (44%), Gaps = 81/379 (21%)
Query: 30 LRYCSAHIAVSQ------GQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD- 82
L Y S A +Q G Q+H + K GL+++ FI N++I +YA GL+S+A+ +FD
Sbjct: 128 LTYPSVFKAYAQLGHAHYGAQLHGRVVKLGLQNDQFICNTIIYMYANGGLMSEARRVFDG 187
Query: 83 ---SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREA 139
D VA N MI GY + ++++R +FD + VS+ SMI G+ +N EA
Sbjct: 188 KKLELYDHDVVAINSMIMGYAKCGEIDESRNLFDDMITRTSVSWNSMISGYVRNGKLMEA 247
Query: 140 LEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNM 199
LE+F M++ G +E T+ S++++ HLG + + +H + + + VI+ T +++M
Sbjct: 248 LELFNKMQVEGFEVSEFTMVSLLNACAHLGALQHGKWVHDYIKRNHFELNVIVVTAIIDM 307
Query: 200 YCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMI 259
YC C S+ A +F+ R + WN ++ G A G A E F ++ S +
Sbjct: 308 YCKCGSVENAVEVFETCPRRGLSCWNSIIIGLAMNGHEREAFEFFSKLESSKL------- 360
Query: 260 DGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFD 319
+ P+ V + +++AC
Sbjct: 361 -----------------------LKPDSVSFIGVLTACKH-------------------- 377
Query: 320 CYDFIQATIIHFYAACGRINLARLQFEL-----GIKDHIASWNALIAGFIRNGMIEDARQ 374
G IN AR FEL I+ I + ++ + G++E+A +
Sbjct: 378 ---------------LGAINKARDYFELMMNKYEIEPSIKHYTCIVDVLGQAGLLEEAEE 422
Query: 375 LFNNMQ-KRDVYSWSAMIS 392
L M K D W +++S
Sbjct: 423 LIKGMPLKPDAIIWGSLLS 441
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 101/239 (42%), Gaps = 63/239 (26%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E +VS L C+ A+ G+ +H I ++ E N + ++I++Y KCG + A +F+
Sbjct: 263 EFTMVSLLNACAHLGALQHGKWVHDYIKRNHFELNVIVVTAIIDMYCKCGSVENAVEVFE 322
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+C P + + S+I+G A N REA E
Sbjct: 323 TC-------------------------------PRRGLSCWNSIIIGLAMNGHEREAFEF 351
Query: 143 FRDMRILGVI-PNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYC 201
F + ++ P+ V+ V+++ HLG I + R +LM++ + I
Sbjct: 352 FSKLESSKLLKPDSVSFIGVLTACKHLGAINKARD----YFELMMNKYEI---------- 397
Query: 202 VCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSK-DVVSWGTMI 259
E +I + +++ +AGL+E A EL + +P K D + WG+++
Sbjct: 398 ----------------EPSIKHYTCIVDVLGQAGLLEEAEELIKGMPLKPDAIIWGSLL 440
>gi|297827241|ref|XP_002881503.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297327342|gb|EFH57762.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 669
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 172/588 (29%), Positives = 307/588 (52%), Gaps = 49/588 (8%)
Query: 88 DPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMR 147
D + +IS Y R +R + A VFD+ ++ SY ++++ + + + +A +F +
Sbjct: 56 DNFLASKLISFYTRQNRFHQALHVFDEITVRNAFSYNALLIAYTSREMYFDAFSLF--LS 113
Query: 148 ILG--------VIPNEVTLASVISSSVHLGGIWE---CRMLHGLVIKLMIDGFVIISTNL 196
+G P+ ++++ V+ + W R +HG VI+ D V + L
Sbjct: 114 WIGSSCYSSGAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGGSDSDVFVGNGL 173
Query: 197 LNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWG 256
+ Y C + +E AR++F+ + +DVVSW
Sbjct: 174 ITYYTKCDN-------------------------------IESARKVFDEMSDRDVVSWN 202
Query: 257 TMIDGYLQVERLSEALTMYRAML-CDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVK 315
+MI GY Q + +Y+AML C PN+V ++ ++ ACG++ G+++H +++
Sbjct: 203 SMISGYSQSGSFEDCKKLYKAMLGCSDFKPNEVTVISVLQACGQSSDLVFGMEVHKKMIE 262
Query: 316 AGFDCYDFIQATIIHFYAACGRINLARLQF-ELGIKDHIASWNALIAGFIRNGMIEDARQ 374
+ +I FYA CG ++ AR F E+ KD + ++ A+I+G++ +G++++A
Sbjct: 263 NHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSV-TYGAIISGYMAHGLVKEAMA 321
Query: 375 LFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGT 434
LF+ M+ + +W+A+ISG QN + F M+ G +PN +T+ S+ ++ S
Sbjct: 322 LFSEMESIGLSTWNAVISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSN 381
Query: 435 LKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAII 494
LK G+ H + + N N ++ +IID YAK G + A VF + +DR+ V W AII
Sbjct: 382 LKGGKEIHAFAIRNGSDNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIV--WTAII 439
Query: 495 CGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNV 554
A+HGD++ ++ ++ K +++T VLS H+G D + F SM + YN+
Sbjct: 440 TAYAVHGDSDSACSLFDQMQCLGTKPDNVTLTAVLSAFAHSGDSDKAQHIFDSMLTKYNI 499
Query: 555 EPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAK 614
EP ++HY CMV +L RAG+L +A E I MP++ +WG LL + + G+VE+ A
Sbjct: 500 EPGVEHYACMVSVLSRAGKLSNAMEFISKMPIEPIAKVWGALLNGASVLGDVEIARFACD 559
Query: 615 SLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
L ++P + + +++N+Y AGRWE+A +R +M+ G+K++PG S
Sbjct: 560 RLFEMEPENTGNYTIMANLYTQAGRWEEAEVVRDKMKRIGLKKIPGTS 607
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 120/484 (24%), Positives = 218/484 (45%), Gaps = 69/484 (14%)
Query: 26 LVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCS 85
++ AL C S +Q+H + + G +S+ F+ N LI Y KC
Sbjct: 135 VLKALSGCDDFWLGSLARQVHGFVIRGGSDSDVFVGNGLITYYTKC-------------- 180
Query: 86 TLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRD 145
D + AR+VFD+ + VS+ SMI G++Q+ + + ++++
Sbjct: 181 -----------------DNIESARKVFDEMSDRDVVSWNSMISGYSQSGSFEDCKKLYKA 223
Query: 146 MRILG---VIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
M LG PNEVT+ SV+ + + +H +I+ I + + ++ Y
Sbjct: 224 M--LGCSDFKPNEVTVISVLQACGQSSDLVFGMEVHKKMIENHIQMDLSLCNAVIGFYAK 281
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
C SL AR+LFDEM E++ V++ +++G+ GLV+ A LF + S + +W +I G
Sbjct: 282 CGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAVISGL 341
Query: 263 LQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD 322
+Q E + +R M+ G PN V + L+ + + G +IH+ ++ G D
Sbjct: 342 MQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGSDNNI 401
Query: 323 FIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKR 382
++ +II N A+L F LG A+++F+N + R
Sbjct: 402 YVTTSIID--------NYAKLGFLLG-----------------------AQRVFDNCKDR 430
Query: 383 DVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAH 442
+ W+A+I+ YA + + A LF M G KP+ +T+ +V A A SG + +
Sbjct: 431 SLIVWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDNVTLTAVLSAFAHSGDSDKAQHIF 490
Query: 443 EYVLNN-SITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHG 501
+ +L +I A ++ + ++ G ++ A E + + W A++ G ++ G
Sbjct: 491 DSMLTKYNIEPGVEHYACMVSVLSRAGKLSNAMEFISKMPIEPIA-KVWGALLNGASVLG 549
Query: 502 DANL 505
D +
Sbjct: 550 DVEI 553
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/380 (22%), Positives = 181/380 (47%), Gaps = 16/380 (4%)
Query: 14 KANLQNSDY---ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAK 70
KA L SD+ E+ ++S L+ C + G ++H + ++ ++ + + N++I YAK
Sbjct: 222 KAMLGCSDFKPNEVTVISVLQACGQSSDLVFGMEVHKKMIENHIQMDLSLCNAVIGFYAK 281
Query: 71 CGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGF 130
CG + A+++FD S D V +ISGY+ + + +A +F + ++ ++I G
Sbjct: 282 CGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAVISGL 341
Query: 131 AQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFV 190
QN+ E + FR+M G PN VTL+S++ S + + + +H I+ D +
Sbjct: 342 MQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGSDNNI 401
Query: 191 IISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERI--- 247
++T++++ Y L+ A+ +FD K+R+++ W ++ +A G + A LF+++
Sbjct: 402 YVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIVWTAIITAYAVHGDSDSACSLFDQMQCL 461
Query: 248 -PSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCD-GIAPNDVMIVDLISACGRAMAFGE 305
D V+ ++ + +A ++ +ML I P ++S RA
Sbjct: 462 GTKPDNVTLTAVLSAFAHSGDSDKAQHIFDSMLTKYNIEPGVEHYACMVSVLSRAGKLSN 521
Query: 306 GLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQ----FELGIKDHIASWNALIA 361
++ I K + + +++ + G + +AR FE+ ++ ++ +
Sbjct: 522 AME---FISKMPIEPIAKVWGALLNGASVLGDVEIARFACDRLFEME-PENTGNYTIMAN 577
Query: 362 GFIRNGMIEDARQLFNNMQK 381
+ + G E+A + + M++
Sbjct: 578 LYTQAGRWEEAEVVRDKMKR 597
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 125/306 (40%), Gaps = 33/306 (10%)
Query: 306 GLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIR 365
LQ+H+ IV +F+ + +I FY R + A F+ + S+NAL+ +
Sbjct: 41 ALQLHARIVVFSIAPDNFLASKLISFYTRQNRFHQALHVFDEITVRNAFSYNALLIAYTS 100
Query: 366 NGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSV 425
M DA LF + YS SG A +P+ I++ V
Sbjct: 101 REMYFDAFSLFLSWIGSSCYS-----SGAA--------------------RPDSISISCV 135
Query: 426 FCAIASSGTLKEG---RWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRD 482
A++ G R H +V+ + + +I Y KC +I +A +VF + D
Sbjct: 136 LKALSGCDDFWLGSLARQVHGFVIRGGSDSDVFVGNGLITYYTKCDNIESARKVFDEMSD 195
Query: 483 RTTSVSPWNAIICGLAMHGDANLTLKIYSD-LEKRNIKLNSITFIGVLSTCCHAGLVDLG 541
R V WN++I G + G K+Y L + K N +T I VL C + + G
Sbjct: 196 R--DVVSWNSMISGYSQSGSFEDCKKLYKAMLGCSDFKPNEVTVISVLQACGQSSDLVFG 253
Query: 542 ERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASR 601
K M + ++ DL ++ + G L+ A + M K D V +G +++
Sbjct: 254 MEVHKKMIENH-IQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEK-DSVTYGAIISGYM 311
Query: 602 IHGNVE 607
HG V+
Sbjct: 312 AHGLVK 317
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 116/249 (46%), Gaps = 29/249 (11%)
Query: 25 ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSC 84
+L+ +L Y S + G++IH+ ++G ++N ++ S+I+ YAK G + A+ +FD+C
Sbjct: 371 SLLPSLTYSSN---LKGGKEIHAFAIRNGSDNNIYVTTSIIDNYAKLGFLLGAQRVFDNC 427
Query: 85 STLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCC------VSYTSMIMGFAQNDCWRE 138
+ +I+ Y + + A +FD+ ++C V+ T+++ FA + +
Sbjct: 428 KDRSLIVWTAIITAYAVHGDSDSACSLFDQ--MQCLGTKPDNVTLTAVLSAFAHSGDSDK 485
Query: 139 ALEVFRDM----RILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIIST 194
A +F M I + + + SV+S + L E + K+ I+ +
Sbjct: 486 AQHIFDSMLTKYNIEPGVEHYACMVSVLSRAGKLSNAME------FISKMPIEPIAKVWG 539
Query: 195 NLLNMYCVCSSLVEARSLFD---EMKERNIVSWNVMLNGFAKAGL---VELARELFERIP 248
LLN V + AR D EM+ N ++ +M N + +AG E+ R+ +RI
Sbjct: 540 ALLNGASVLGDVEIARFACDRLFEMEPENTGNYTIMANLYTQAGRWEEAEVVRDKMKRIG 599
Query: 249 SKDV--VSW 255
K + SW
Sbjct: 600 LKKIPGTSW 608
>gi|115463097|ref|NP_001055148.1| Os05g0305300 [Oryza sativa Japonica Group]
gi|113578699|dbj|BAF17062.1| Os05g0305300 [Oryza sativa Japonica Group]
Length = 852
Score = 310 bits (794), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 202/657 (30%), Positives = 334/657 (50%), Gaps = 65/657 (9%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
L L+ C + G H LI +G ESN FI N+L+ +Y++CG + +A +FD
Sbjct: 117 HFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFD 176
Query: 83 SCSTL---DPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREA 139
+ D ++ N ++S ++++ A ++F K T ++ N+ R
Sbjct: 177 EITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKM--------TLIVHEKPTNE--RSD 226
Query: 140 LEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNM 199
+ +++ +++ + L + + + +HG I+ V + L++
Sbjct: 227 I---------------ISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDA 271
Query: 200 YCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELF-----ERIPSKDVVS 254
Y C + A +F+ M+ +++VSWN M+ G++++G + A ELF E IP D+V+
Sbjct: 272 YAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIP-LDMVT 330
Query: 255 WGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIV 314
W +I GY Q EAL ++R M+ G PN V I+ ++SAC AF +G++IH+ +
Sbjct: 331 WTAVIAGYSQRGCSHEALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSL 390
Query: 315 KAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDH-IASWNALIAGFIRNGMIEDAR 373
K +C L L + G +D + +NALI + + + AR
Sbjct: 391 K---NC-------------------LLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAAR 428
Query: 374 QLFNN--MQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDA--GVKPNEITMVSVFCAI 429
+F++ +++R+V +W+ MI G+AQ N AL+LF M+ GV PN T+ + A
Sbjct: 429 SIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMAC 488
Query: 430 ASSGTLKEGRWAHEYVLNNSITLNDNLSAA--IIDMYAKCGSINTAFEVFYHIRDRTTSV 487
A ++ G+ H YVL + + A +I+MY+KCG ++TA VF + + S
Sbjct: 489 AHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCGDVDTARHVFDSMSQK--SA 546
Query: 488 SPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKS 547
W +++ G MHG + L I+ + K + ITF+ VL C H G+VD G YF S
Sbjct: 547 ISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDS 606
Query: 548 MKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVE 607
M + Y + P +HY +DLL R G+L+ A + ++ MPM+ V+W LL+A R+H NVE
Sbjct: 607 MSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPMEPTAVVWVALLSACRVHSNVE 666
Query: 608 VGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
+ E A L + + S L+SNIYA AGRW+D IR M+ G+K+ PG S V
Sbjct: 667 LAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSWV 723
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 144/541 (26%), Positives = 249/541 (46%), Gaps = 89/541 (16%)
Query: 1 TPLDHFH--SVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNT 58
T LD F ++ +K + SD +++V+ L C + AV Q +++H ++G +
Sbjct: 204 TALDLFSKMTLIVHEKPTNERSDI-ISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDV 262
Query: 59 FIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVF-----D 113
F+ N+LI+ YAKCGL+ A +F+ D V+ N M++GY ++ A E+F +
Sbjct: 263 FVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKE 322
Query: 114 KTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWE 173
P+ V++T++I G++Q C EAL VFR M G +PN VT+ SV+S+ LG +
Sbjct: 323 NIPLD-MVTWTAVIAGYSQRGCSHEALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQ 381
Query: 174 CRMLHGLVIKLMI----------DGFVIISTNLLNMYCVCSSLVEARSLFDE--MKERNI 221
+H +K + D +++ L++MY C S ARS+FD+ ++ERN+
Sbjct: 382 GMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNV 441
Query: 222 VSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCD 281
V+W VM+ G A+ G A +LF VE +SE
Sbjct: 442 VTWTVMIGGHAQYGDSNDALKLF--------------------VEMISEPY--------- 472
Query: 282 GIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD----FIQATIIHFYAACGR 337
G+APN I ++ AC A G QIH+ +++ YD F+ +I+ Y+ CG
Sbjct: 473 GVAPNAYTISCILMACAHLAAIRIGKQIHAYVLR--HHQYDSSAYFVANCLINMYSKCGD 530
Query: 338 INLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQN 397
++ AR F+ + SW +++ G+ +G +A +F+ M+K
Sbjct: 531 VDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRK---------------- 574
Query: 398 EQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG-RWAHEYVLNNSITLNDNL 456
AG P++IT + V A + G + +G + + +T
Sbjct: 575 ---------------AGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEH 619
Query: 457 SAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKR 516
A ID+ A+ G ++ A++ + T+V W A++ +H + L + L +
Sbjct: 620 YAYAIDLLARFGRLDKAWKTVKDMPMEPTAVV-WVALLSACRVHSNVELAEHALNKLVEM 678
Query: 517 N 517
N
Sbjct: 679 N 679
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 90/424 (21%), Positives = 172/424 (40%), Gaps = 77/424 (18%)
Query: 231 FAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMI 290
+ G + A + ER+ V W +I +++ RL A+ + ML G + +
Sbjct: 61 YLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRLDHFTL 120
Query: 291 VDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQF----E 346
++ ACG ++ G H +I GF+ FI ++ Y+ CG + A + F +
Sbjct: 121 PHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQ 180
Query: 347 LGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALEL 406
GI D + SWN++++ +++ A LF+ M + ++ NE+ ++
Sbjct: 181 RGIDD-VISWNSIVSAHVKSSNAWTALDLFSKM--------TLIVHEKPTNERSDI---- 227
Query: 407 FHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAK 466
I++V++ A S + + + H + N L+ + A+ID YAK
Sbjct: 228 -------------ISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAK 274
Query: 467 CGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKL------ 520
CG + A +VF + + V WNA++ G + G+ +++ ++ K NI L
Sbjct: 275 CGLMENAVKVFNMMEFK--DVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWT 332
Query: 521 -----------------------------NSITFIGVLSTCCHAGLVDLG-ERYFKSMKS 550
N +T I VLS C G G E + S+K+
Sbjct: 333 AVIAGYSQRGCSHEALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKN 392
Query: 551 VY--------NVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKA-DVVIWGTLLAASR 601
+ DL Y ++D+ + + A + +P++ +VV W ++
Sbjct: 393 CLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHA 452
Query: 602 IHGN 605
+G+
Sbjct: 453 QYGD 456
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/268 (20%), Positives = 113/268 (42%), Gaps = 11/268 (4%)
Query: 357 NALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVK 416
++A ++ G + A + + W+ +I + + + + A+ + M+ AG +
Sbjct: 55 TGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTR 114
Query: 417 PNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEV 476
+ T+ V A + + G H + N N + A++ MY++CGS+ A +
Sbjct: 115 LDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMI 174
Query: 477 FYHIRDR-TTSVSPWNAIICGLAMHGDANLTLKIYSDL------EKRNIKLNSITFIGVL 529
F I R V WN+I+ +A L ++S + + N + + I+ + +L
Sbjct: 175 FDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNIL 234
Query: 530 STCCHAGLV-DLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKA 588
C V E + ++++ D+ ++D + G +E+A +V M K
Sbjct: 235 PACGSLKAVPQTKEVHGNAIRN--GTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFK- 291
Query: 589 DVVIWGTLLAASRIHGNVEVGERAAKSL 616
DVV W ++A GN + K++
Sbjct: 292 DVVSWNAMVAGYSQSGNFKAAFELFKNM 319
>gi|147812559|emb|CAN70631.1| hypothetical protein VITISV_020725 [Vitis vinifera]
Length = 713
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 188/636 (29%), Positives = 303/636 (47%), Gaps = 95/636 (14%)
Query: 29 ALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLD 88
A + C + V+ G+ +H K+GL ++ F+ ++L+++Y K
Sbjct: 122 AHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTK------------------ 163
Query: 89 PVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRI 148
N ++ + R VF + P++ VS+T++I G + +EAL F +M
Sbjct: 164 -------------NGKIFEGRRVFHEMPMRNVVSWTAIITGLVRAGYNKEALVYFSEMWR 210
Query: 149 LGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVE 208
V + T A + + G + R +H +K D ++ L MY C
Sbjct: 211 SRVEYDSYTFAIALKACADSGALNYGREIHAQAMKKGFDVSSFVANTLATMYNKC----- 265
Query: 209 ARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERL 268
G +E LFE++ +DVVSW T+I +Q+ +
Sbjct: 266 --------------------------GKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQE 299
Query: 269 SEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATI 328
A+ + M ++PN+ +IS C G Q+H++I+ G ++ +I
Sbjct: 300 ECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSI 359
Query: 329 IHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWS 388
+ YA CG++ + + +F+ M +RD+ SWS
Sbjct: 360 MTMYAKCGQLTSSSV-------------------------------IFHEMTRRDIVSWS 388
Query: 389 AMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNN 448
+I+GY Q + A EL M G KP E + SV A + L+ G+ H YVL+
Sbjct: 389 TIIAGYXQGGHVSEAFELLSWMRMEGPKPTEFALASVLSACGNMAILEHGKQLHAYVLSI 448
Query: 449 SITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLK 508
+ + +A+I+MY KCGSI A +F + + W A+I G A HG + +
Sbjct: 449 GLEHTAMVLSALINMYCKCGSIEEASRIFDAAEN--DDIVSWTAMINGYAEHGYSREVID 506
Query: 509 IYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLL 568
++ + + ++ +S+TFIGVLS C HAGLVDLG YF +M Y + P +HYGCM+DLL
Sbjct: 507 LFEKIPRVGLRPDSVTFIGVLSACSHAGLVDLGFHYFNAMSKKYQISPSKEHYGCMIDLL 566
Query: 569 GRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRV 628
RAG+L DAE +I +MP D V+W TLL A R+HG+VE G R A+ + L+P+ + +
Sbjct: 567 CRAGRLSDAEHMIEAMPFHRDDVVWSTLLRACRVHGDVERGRRTAERILQLEPNCAGTHI 626
Query: 629 LLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
L+NIYA G+W +A IRK M+ G+ + PG+S +
Sbjct: 627 TLANIYASKGKWREAADIRKLMKSKGVIKEPGWSWI 662
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 114/493 (23%), Positives = 206/493 (41%), Gaps = 103/493 (20%)
Query: 14 KANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGL 73
++ ++ Y A+ AL+ C+ A++ G++IH+ K G + ++F+ N+L +Y KCG
Sbjct: 210 RSRVEYDSYTFAI--ALKACADSGALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGK 267
Query: 74 ISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQN 133
+ ++F+ S D V+ +I+ ++ MG Q
Sbjct: 268 LEYGLTLFEKMSMRDVVSWTTIITTLVQ--------------------------MG--QE 299
Query: 134 DCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIIS 193
+C A++ F MR V PNE T A+VIS +L I LH L++ L + + +
Sbjct: 300 EC---AVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVE 356
Query: 194 TNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVV 253
+++ MY C L + +F EM R+IVSW+ ++ G+ + G V A EL +
Sbjct: 357 NSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYXQGGHVSEAFEL---------L 407
Query: 254 SWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSII 313
SW M +G P + + ++SACG G Q+H+ +
Sbjct: 408 SW----------------------MRMEGPKPTEFALASVLSACGNMAILEHGKQLHAYV 445
Query: 314 VKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDAR 373
+ G + + + +I+ Y CG I A F+ D I SW A+I
Sbjct: 446 LSIGLEHTAMVLSALINMYCKCGSIEEASRIFDAAENDDIVSWTAMI------------- 492
Query: 374 QLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSG 433
+GYA++ ++LF + G++P+ +T + V A + +G
Sbjct: 493 ------------------NGYAEHGYSREVIDLFEKIPRVGLRPDSVTFIGVLSACSHAG 534
Query: 434 TLKEG-RWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTA---FEVFYHIRDRTTSVSP 489
+ G + + I+ + +ID+ + G ++ A E RD
Sbjct: 535 LVDLGFHYFNAMSKKYQISPSKEHYGCMIDLLCRAGRLSDAEHMIEAMPFHRDDVV---- 590
Query: 490 WNAIICGLAMHGD 502
W+ ++ +HGD
Sbjct: 591 WSTLLRACRVHGD 603
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 120/562 (21%), Positives = 216/562 (38%), Gaps = 101/562 (17%)
Query: 43 QQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRN 102
Q IH + ESN ++ K G + A+ MFD S D ++ +ISGY+
Sbjct: 39 QNIHFISQTDLPESNKQLKE-----LVKTGHLGNARRMFDKMSQKDEISWTTLISGYVNA 93
Query: 103 DRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVI 162
+ ++A +F ++ + I+ A C +
Sbjct: 94 NDSSEALLLFKNMRVESGLRIDPFILSLAHKACG-------------------------L 128
Query: 163 SSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIV 222
+S V+ G +LHG +K + V + + LL+MY + E R +F EM RN+V
Sbjct: 129 NSDVNYG-----ELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMRNVV 183
Query: 223 SWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDG 282
SW ++ G +AG + EAL + M
Sbjct: 184 SWTAIITGLVRAGYNK-------------------------------EALVYFSEMWRSR 212
Query: 283 IAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLAR 342
+ + + AC + A G +IH+ +K GFD F+ T+ Y CG++
Sbjct: 213 VEYDSYTFAIALKACADSGALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGL 272
Query: 343 LQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNM 402
FE + SW +I ++ G E A Q F M++ D
Sbjct: 273 TLFEKMSMRDVVSWTTIITTLVQMGQEECAVQAFIRMRESD------------------- 313
Query: 403 ALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIID 462
V PNE T +V A+ ++ G H +L+ + + ++ +I+
Sbjct: 314 ------------VSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIMT 361
Query: 463 MYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNS 522
MYAKCG + ++ +F+ + R + W+ II G G + ++ S + K
Sbjct: 362 MYAKCGQLTSSSVIFHEMTRR--DIVSWSTIIAGYXQGGHVSEAFELLSWMRMEGPKPTE 419
Query: 523 ITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIR 582
VLS C + +++ G++ + S+ +E ++++ + G +E+A +
Sbjct: 420 FALASVLSACGNMAILEHGKQLHAYVLSI-GLEHTAMVLSALINMYCKCGSIEEASRIFD 478
Query: 583 SMPMKADVVIWGTLLAASRIHG 604
+ D+V W ++ HG
Sbjct: 479 AAE-NDDIVSWTAMINGYAEHG 499
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 89/381 (23%), Positives = 167/381 (43%), Gaps = 97/381 (25%)
Query: 13 QKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCG 72
+++++ ++Y A V + C+ + G+Q+H+LI GL ++ ++NS++ +YAKCG
Sbjct: 310 RESDVSPNEYTFAAV--ISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAKCG 367
Query: 73 LISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQ 132
++ + +F + D V+ + +I+GY + ++
Sbjct: 368 QLTSSSVIFHEMTRRDIVSWSTIIAGYXQGGHVS-------------------------- 401
Query: 133 NDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVII 192
EA E+ MR+ G P E LASV+S+ ++ + + LH V+ + ++ ++
Sbjct: 402 -----EAFELLSWMRMEGPKPTEFALASVLSACGNMAILEHGKQLHAYVLSIGLEHTAMV 456
Query: 193 STNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDV 252
+ L+NMYC C S+ EA +FD + +IVSW M+NG+A+ G +LFE+IP
Sbjct: 457 LSALINMYCKCGSIEEASRIFDAAENDDIVSWTAMINGYAEHGYSREVIDLFEKIPRV-- 514
Query: 253 VSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSI 312
G+ P+ V + ++SAC H+
Sbjct: 515 -----------------------------GLRPDSVTFIGVLSACS-----------HAG 534
Query: 313 IVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGI-KDHIASWNALIAGFIRNGMIED 371
+V GF H++ A + ++++ K+H + +I R G + D
Sbjct: 535 LVDLGF-----------HYFNAMSK------KYQISPSKEH---YGCMIDLLCRAGRLSD 574
Query: 372 ARQLFNNMQ-KRDVYSWSAMI 391
A + M RD WS ++
Sbjct: 575 AEHMIEAMPFHRDDVVWSTLL 595
>gi|224129982|ref|XP_002320719.1| predicted protein [Populus trichocarpa]
gi|222861492|gb|EEE99034.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 186/546 (34%), Positives = 295/546 (54%), Gaps = 45/546 (8%)
Query: 123 YTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVI 182
+ ++I ++ +EA+ + M G ++ TL+ V+ + +G + E +HGL+
Sbjct: 95 WNAIIKTYSHGHDPKEAMWLVSLMLENGAFADKFTLSLVLKACSRVGLVKEGMQIHGLLK 154
Query: 183 KLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARE 242
KL + + L++ Y C LV A +FD M +R+ VS+N M++G+ K G ++LAR
Sbjct: 155 KLEFGSDLFLQNCLISFYVKCGCLVRASQVFDRMPKRDSVSYNSMIDGYVKGGRIDLARV 214
Query: 243 LFERIP--SKDVVSWGTMIDGYLQVER-LSEALTMYRAMLCDGIAPNDVMIVDLISACGR 299
+F+ IP ++++SW ++I GY Q E + A ++ M P DLIS
Sbjct: 215 VFDCIPLEERNLISWNSLIRGYAQSEDGILVAWQLFAKM------PER----DLIS---- 260
Query: 300 AMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNAL 359
++I CGR+ A+ F+ I SW +
Sbjct: 261 -------------------------WNSMIDGCVKCGRMEDAQGLFDRMPNRDIVSWANM 295
Query: 360 IAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGM-VDAGVKPN 418
I G+ +NG ++ AR LF+ M +RDV +++AM+ GY QN AL +F+GM D +
Sbjct: 296 IDGYAKNGRVDIARSLFDEMPERDVVAYNAMMGGYVQNGYCMEALGIFYGMQSDGNFLLD 355
Query: 419 EITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFY 478
T++ AIA G + +G H ++ +L+ L A+IDMY+KCGSI A VF
Sbjct: 356 NATLLIALSAIAQLGHIDKGVAIHRFIEEIGFSLDGRLGVALIDMYSKCGSIENAMMVFE 415
Query: 479 HIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLV 538
+I+++ SV WNAII GLA+HG L ++E+ ++ + ITFIG+L+ C HAGLV
Sbjct: 416 NIKEK--SVDHWNAIIGGLAIHGLGELAFDFLMEMERMRVEPDDITFIGLLNACGHAGLV 473
Query: 539 DLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLA 598
G F+ M+ V+ VEP L+HYGCMVD+LGRAG +E+A+ + MP + + VIW +LL+
Sbjct: 474 KEGMMCFELMRRVHKVEPKLQHYGCMVDILGRAGHIEEAKNFVEEMPFEPNDVIWRSLLS 533
Query: 599 ASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRL 658
A + H + VG+ A++L L S VL SN+YA G+W D +R M+ +K++
Sbjct: 534 ACKTHESFNVGQPVAENLMRLDSPSPSSYVLASNMYAGLGKWNDVRKVRAMMKQKNLKKI 593
Query: 659 PGFSGV 664
PG S +
Sbjct: 594 PGCSWI 599
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 148/524 (28%), Positives = 238/524 (45%), Gaps = 87/524 (16%)
Query: 22 YELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMF 81
+ L+LV L+ CS V +G QIH L+ K S+ F+QN LI+ Y KCG + +A +F
Sbjct: 128 FTLSLV--LKACSRVGLVKEGMQIHGLLKKLEFGSDLFLQNCLISFYVKCGCLVRASQVF 185
Query: 82 DSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPI--KCCVSYTSMIMGFAQN-DCWRE 138
D D V+ N MI GY++ R++ AR VFD P+ + +S+ S+I G+AQ+ D
Sbjct: 186 DRMPKRDSVSYNSMIDGYVKGGRIDLARVVFDCIPLEERNLISWNSLIRGYAQSEDGILV 245
Query: 139 ALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLN 198
A ++F M E L S W MIDG
Sbjct: 246 AWQLFAKM-------PERDLIS-----------WNS----------MIDG---------- 267
Query: 199 MYCV-CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGT 257
CV C + +A+ LFD M R+IVSW M++G+AK G V++AR LF+ +P +DVV++
Sbjct: 268 --CVKCGRMEDAQGLFDRMPNRDIVSWANMIDGYAKNGRVDIARSLFDEMPERDVVAYNA 325
Query: 258 MIDGYLQVERLSEALTMYRAMLCDG--IAPNDVMIVDLISACGRAMAFGEGLQIHSIIVK 315
M+ GY+Q EAL ++ M DG + N +++ L SA + +G+ IH I +
Sbjct: 326 MMGGYVQNGYCMEALGIFYGMQSDGNFLLDNATLLIAL-SAIAQLGHIDKGVAIHRFIEE 384
Query: 316 AGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQL 375
GF + +I Y+ CG I A + FE + + WNA+I G +G+ E
Sbjct: 385 IGFSLDGRLGVALIDMYSKCGSIENAMMVFENIKEKSVDHWNAIIGGLAIHGLGE----- 439
Query: 376 FNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTL 435
+A + M V+P++IT + + A +G +
Sbjct: 440 --------------------------LAFDFLMEMERMRVEPDDITFIGLLNACGHAGLV 473
Query: 436 KEGRWAHEYVLN-NSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAII 494
KEG E + + + ++D+ + G I A + V W +++
Sbjct: 474 KEGMMCFELMRRVHKVEPKLQHYGCMVDILGRAGHIEEAKNFVEEMPFEPNDVI-WRSLL 532
Query: 495 CGLAMHGDANLTLKIYSDLEKRNIKLNSITFIG-VLSTCCHAGL 537
H N+ + +L ++L+S + VL++ +AGL
Sbjct: 533 SACKTHESFNVGQPVAENL----MRLDSPSPSSYVLASNMYAGL 572
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 109/240 (45%), Gaps = 19/240 (7%)
Query: 385 YSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEY 444
+ W+A+I Y+ P A+ L M++ G ++ T+ V A + G +KEG H
Sbjct: 93 FLWNAIIKTYSHGHDPKEAMWLVSLMLENGAFADKFTLSLVLKACSRVGLVKEGMQIHGL 152
Query: 445 VLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDAN 504
+ + L +I Y KCG + A +VF + R SVS +N++I G G +
Sbjct: 153 LKKLEFGSDLFLQNCLISFYVKCGCLVRASQVFDRMPKRD-SVS-YNSMIDGYVKGGRID 210
Query: 505 LTLKIYS--DLEKRN-IKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHY 561
L ++ LE+RN I NS+ + + + + F M E DL +
Sbjct: 211 LARVVFDCIPLEERNLISWNSL----IRGYAQSEDGILVAWQLFAKMP-----ERDLISW 261
Query: 562 GCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQP 621
M+D + G++EDA+ + MP + D+V W ++ +G V++ A+SL P
Sbjct: 262 NSMIDGCVKCGRMEDAQGLFDRMPNR-DIVSWANMIDGYAKNGRVDI----ARSLFDEMP 316
>gi|357130409|ref|XP_003566841.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Brachypodium distachyon]
Length = 815
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 192/644 (29%), Positives = 305/644 (47%), Gaps = 104/644 (16%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
+ L + L+ C GQ +H+ + K GLE++ + + L+ +Y++C +A +F
Sbjct: 252 KYTLPTVLKCCMELGLAKYGQSVHASVIKRGLETDNVLNSCLVEMYSRCLSAEEAYEVFI 311
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
D V C+ MIS C F ++D EAL++
Sbjct: 312 RIDEPDVVHCSAMIS----------------------C---------FDRHDMAWEALDL 340
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
F M +GV PN + + G CR +H ++K GF ++
Sbjct: 341 FVKMSGMGVKPNHYIFVGIAGVASRTGDANLCRSVHAYIVK---SGFAMLKG-------- 389
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
+ +LN + K G V+ A F+ I D SW T++ +
Sbjct: 390 --------------------VGDAILNMYVKVGAVQDATVTFDLIHEPDTFSWNTILSAF 429
Query: 263 LQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD 322
+ L +++ M C+G + N V ++ C M G Q+H+ I+K+G
Sbjct: 430 YSGSNCEQGLRIFKQMACEGFSANKYTYVSVLRCCTSLMNLRFGTQVHACILKSGLQNDT 489
Query: 323 FIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKR 382
+ ++ YA G A L FE +++R
Sbjct: 490 DVSRMLVDMYAQSGCFTSACLVFE-------------------------------QLKER 518
Query: 383 DVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITM---VSVFCAIASSGT-LKEG 438
D +SW+ ++SGYA+ E+ +E F M+ ++P++ T+ +SV +AS G+ L+
Sbjct: 519 DAFSWTVIMSGYAKTEEAEKVVEYFRSMLRENIRPSDATLAVSLSVCSDMASLGSGLQLH 578
Query: 439 RWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLA 498
WA + N+S+ +S A++DMY KCG+I A E+ +H + V+ WN IICG +
Sbjct: 579 SWAIKSGWNSSV-----VSGALVDMYVKCGNIADA-EMLFHESETRDQVA-WNTIICGYS 631
Query: 499 MHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDL 558
HG L + + + + ITF+GVLS C HAGL++ G +YFKS+ S+Y + P +
Sbjct: 632 QHGHGYKALDAFKQMVDEGKRPDGITFVGVLSACSHAGLLNEGRKYFKSLSSIYGITPTM 691
Query: 559 KHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAG 618
+HY CMVD+L +AG+L +AE +I MP+ D IW T+L A RIH N+E+ ERAA+ L
Sbjct: 692 EHYACMVDILSKAGRLVEAESLINQMPLAPDSSIWRTILGACRIHRNIEIAERAAERLFE 751
Query: 619 LQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
L+P S +LLSNIYAD GRW D +R + D G+K+ PG S
Sbjct: 752 LEPHDASSSILLSNIYADLGRWSDVTRVRNILLDHGVKKEPGCS 795
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 150/642 (23%), Positives = 280/642 (43%), Gaps = 89/642 (13%)
Query: 6 FHSVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLI 65
H+V ++++ L +AL+ C+ + +GQ++H+ + +S L +TF+ +SL+
Sbjct: 41 LHTVAHAEELRLH--------AAALQDCAVRRTLRRGQELHARLLRSALHPDTFLLDSLL 92
Query: 66 NLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTS 125
N+Y KCG RL DAR VFD P + V++T+
Sbjct: 93 NMYCKCG-------------------------------RLVDARRVFDGMPHRDIVAWTA 121
Query: 126 MIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLM 185
MI +AL++F M G+ PN TLASV+ + +HG V+KL
Sbjct: 122 MISAHTAAGDSDQALDMFARMNQEGIAPNGFTLASVLKACSGGSHSKFTHQVHGQVVKLN 181
Query: 186 IDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFE 245
+ ++L+ Y C L A ++ + ER+ VSWN +LNG+A+ G + E
Sbjct: 182 GLDDPYVGSSLVEAYTSCGELDAAETVLLGLPERSDVSWNALLNGYARHGDYRRVMIIIE 241
Query: 246 R-IPSKDVVS---WGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAM 301
+ + S D +S T++ +++ +++ +++ G+ ++V+ L+ R +
Sbjct: 242 KLVASGDEISKYTLPTVLKCCMELGLAKYGQSVHASVIKRGLETDNVLNSCLVEMYSRCL 301
Query: 302 AFGEGLQ----------IHSIIVKAGFDCYD---------------------FIQATIIH 330
+ E + +H + + FD +D +I I
Sbjct: 302 SAEEAYEVFIRIDEPDVVHCSAMISCFDRHDMAWEALDLFVKMSGMGVKPNHYIFVGIAG 361
Query: 331 FYAACGRINLARLQFELGIKDHIASW----NALIAGFIRNGMIEDARQLFNNMQKRDVYS 386
+ G NL R +K A +A++ +++ G ++DA F+ + + D +S
Sbjct: 362 VASRTGDANLCRSVHAYIVKSGFAMLKGVGDAILNMYVKVGAVQDATVTFDLIHEPDTFS 421
Query: 387 WSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVL 446
W+ ++S + L +F M G N+ T VSV S L+ G H +L
Sbjct: 422 WNTILSAFYSGSNCEQGLRIFKQMACEGFSANKYTYVSVLRCCTSLMNLRFGTQVHACIL 481
Query: 447 NNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLT 506
+ + + ++S ++DMYA+ G +A VF +++R W I+ G A +A
Sbjct: 482 KSGLQNDTDVSRMLVDMYAQSGCFTSACLVFEQLKER--DAFSWTVIMSGYAKTEEAEKV 539
Query: 507 LKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLG---ERYFKSMKSVYNVEPDLKHYGC 563
++ + + + NI+ + T LS C + + LG + + ++KS +N G
Sbjct: 540 VEYFRSMLRENIRPSDATLAVSLSVC--SDMASLGSGLQLHSWAIKSGWNSSVV---SGA 594
Query: 564 MVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGN 605
+VD+ + G + DAE + + D V W T++ HG+
Sbjct: 595 LVDMYVKCGNIADAEMLFHESETR-DQVAWNTIICGYSQHGH 635
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 96/394 (24%), Positives = 178/394 (45%), Gaps = 41/394 (10%)
Query: 227 MLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPN 286
+LN + K G + AR +F+ +P +D+V+W MI + +AL M+ M +GIAPN
Sbjct: 91 LLNMYCKCGRLVDARRVFDGMPHRDIVAWTAMISAHTAAGDSDQALDMFARMNQEGIAPN 150
Query: 287 DVMIVDLISACGRAMAFGEGLQIHSIIVKA-GFDCYDFIQATIIHFYAACGRINLARLQF 345
+ ++ AC Q+H +VK G D ++ ++++ Y +CG ++ A
Sbjct: 151 GFTLASVLKACSGGSHSKFTHQVHGQVVKLNGLD-DPYVGSSLVEAYTSCGELDAAETVL 209
Query: 346 ELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALE 405
LG+ ++ DV SW+A+++GYA++ +
Sbjct: 210 -LGLP-----------------------------ERSDV-SWNALLNGYARHGDYRRVMI 238
Query: 406 LFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYA 465
+ +V +G + ++ T+ +V G K G+ H V+ + ++ L++ +++MY+
Sbjct: 239 IIEKLVASGDEISKYTLPTVLKCCMELGLAKYGQSVHASVIKRGLETDNVLNSCLVEMYS 298
Query: 466 KCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITF 525
+C S A+EVF IR V +A+I H A L ++ + +K N F
Sbjct: 299 RCLSAEEAYEVF--IRIDEPDVVHCSAMISCFDRHDMAWEALDLFVKMSGMGVKPNHYIF 356
Query: 526 IGVLSTCCHAGLVDLGERYFKSM-KSVYNVEPDLKHYG-CMVDLLGRAGQLEDAEEVIRS 583
+G+ G +L + KS + + LK G ++++ + G ++DA V
Sbjct: 357 VGIAGVASRTGDANLCRSVHAYIVKSGFAM---LKGVGDAILNMYVKVGAVQDA-TVTFD 412
Query: 584 MPMKADVVIWGTLLAASRIHGNVEVGERAAKSLA 617
+ + D W T+L+A N E G R K +A
Sbjct: 413 LIHEPDTFSWNTILSAFYSGSNCEQGLRIFKQMA 446
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 109/251 (43%), Gaps = 47/251 (18%)
Query: 3 LDHFHSVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQN 62
+++F S+ + N++ SD LA+ +L CS ++ G Q+HS KSG S + +
Sbjct: 540 VEYFRSML---RENIRPSDATLAV--SLSVCSDMASLGSGLQLHSWAIKSGWNS-SVVSG 593
Query: 63 SLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVS 122
+L+++Y KCG I+ A+ +F T D VA N +I GY
Sbjct: 594 ALVDMYVKCGNIADAEMLFHESETRDQVAWNTIICGY----------------------- 630
Query: 123 YTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVI 182
+Q+ +AL+ F+ M G P+ +T V+S+ H G + E R
Sbjct: 631 --------SQHGHGYKALDAFKQMVDEGKRPDGITFVGVLSACSHAGLLNEGRKY----F 678
Query: 183 KLMIDGFVIISTN-----LLNMYCVCSSLVEARSLFDEMKERNIVS-WNVMLNGFAKAGL 236
K + + I T ++++ LVEA SL ++M S W +L
Sbjct: 679 KSLSSIYGITPTMEHYACMVDILSKAGRLVEAESLINQMPLAPDSSIWRTILGACRIHRN 738
Query: 237 VELARELFERI 247
+E+A ER+
Sbjct: 739 IEIAERAAERL 749
>gi|224094835|ref|XP_002310258.1| predicted protein [Populus trichocarpa]
gi|222853161|gb|EEE90708.1| predicted protein [Populus trichocarpa]
Length = 666
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 186/636 (29%), Positives = 307/636 (48%), Gaps = 95/636 (14%)
Query: 29 ALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLD 88
AL+ C +++VS G+ +H K+ ++ F+ ++L+++Y K G
Sbjct: 74 ALKACGLNMSVSFGESLHGYSVKTDFVNSVFVGSALVDMYMKIG---------------- 117
Query: 89 PVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRI 148
++++ VF + P++ VS+T++I G + +EAL F DM I
Sbjct: 118 ---------------KVDEGCIVFKEMPLRNVVSWTAIIAGLVRAGYNKEALAYFSDMWI 162
Query: 149 LGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVE 208
V + T +S + + G + R +H +K ++ L MY C
Sbjct: 163 QKVGCDTYTFSSALKACADSGALNYGREIHCQTLKKGFTAVSFVANTLATMYNKC----- 217
Query: 209 ARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERL 268
G ++ LFE + +DVVSW T+I +Q+ +
Sbjct: 218 --------------------------GKLDYGLRLFESMTQRDVVSWTTIIMSNVQIGQE 251
Query: 269 SEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATI 328
A+ +R M ++PN+ +IS C G Q+H+ +++ G + +I
Sbjct: 252 ENAVKAFRRMRETDVSPNEFTFAAVISGCATLGRIEWGEQLHAHVIRRGLVDSLSVANSI 311
Query: 329 IHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWS 388
+ Y+ C +++LA +F + +RD+ SWS
Sbjct: 312 MAMYSKCWQLDLAS-------------------------------TVFQGLSRRDIISWS 340
Query: 389 AMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNN 448
MISGYAQ A + M G +PNE SV + L++G+ H +VL
Sbjct: 341 TMISGYAQGGCGEEAFDYLSWMRREGPRPNEFAFASVLSVCGNMAILEQGKQLHAHVLCV 400
Query: 449 SITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLK 508
+ N + +A+I+MY+KCGSI A ++F ++ W A+I G A HG + +
Sbjct: 401 GLEQNTMVQSALINMYSKCGSIKEASKIFDEAE--YNNIVSWTAMINGYAEHGYSQEAID 458
Query: 509 IYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLL 568
++ L K ++ +S+TFI VL+ C HAGLVDLG YF S+ V+ + P HYGCM+DLL
Sbjct: 459 LFKKLPKVGLRPDSVTFIAVLAACSHAGLVDLGFHYFNSLSKVHQICPSKDHYGCMIDLL 518
Query: 569 GRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRV 628
RAG+L DAE +I+SMP + D V+W TLL A RIHG+V+ G+RAA+ + L P+ + +
Sbjct: 519 CRAGRLNDAESMIQSMPFQRDDVVWSTLLRACRIHGDVDCGKRAAEKILQLDPNCAVTHI 578
Query: 629 LLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
L+N+YA G+W++A +RK M+ G+ + PG+S +
Sbjct: 579 TLANMYAAKGKWKEAAEVRKMMKSKGVVKEPGWSWI 614
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 116/478 (24%), Positives = 207/478 (43%), Gaps = 95/478 (19%)
Query: 28 SALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTL 87
SAL+ C+ A++ G++IH K G + +F+ N+L +Y KCG + +F+S +
Sbjct: 174 SALKACADSGALNYGREIHCQTLKKGFTAVSFVANTLATMYNKCGKLDYGLRLFESMTQR 233
Query: 88 DPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMR 147
D VS+T++IM Q A++ FR MR
Sbjct: 234 D-------------------------------VVSWTTIIMSNVQIGQEENAVKAFRRMR 262
Query: 148 ILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLV 207
V PNE T A+VIS LG I LH VI+ + + ++ +++ MY C L
Sbjct: 263 ETDVSPNEFTFAAVISGCATLGRIEWGEQLHAHVIRRGLVDSLSVANSIMAMYSKCWQLD 322
Query: 208 EARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVER 267
A ++F + R+I+SW+ M++G+A+ G E E F D +SW
Sbjct: 323 LASTVFQGLSRRDIISWSTMISGYAQGGCGE---EAF------DYLSW------------ 361
Query: 268 LSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQAT 327
M +G PN+ ++S CG +G Q+H+ ++ G + +Q+
Sbjct: 362 ----------MRREGPRPNEFAFASVLSVCGNMAILEQGKQLHAHVLCVGLEQNTMVQSA 411
Query: 328 IIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSW 387
+I+ Y+ CG I A F+ ++I SW A+I G+ +
Sbjct: 412 LINMYSKCGSIKEASKIFDEAEYNNIVSWTAMINGYAEH--------------------- 450
Query: 388 SAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG-RWAHEYVL 446
GY+Q A++LF + G++P+ +T ++V A + +G + G + +
Sbjct: 451 -----GYSQE-----AIDLFKKLPKVGLRPDSVTFIAVLAACSHAGLVDLGFHYFNSLSK 500
Query: 447 NNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDAN 504
+ I + + +ID+ + G +N A + + + V W+ ++ +HGD +
Sbjct: 501 VHQICPSKDHYGCMIDLLCRAGRLNDAESMIQSMPFQRDDV-VWSTLLRACRIHGDVD 557
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 99/430 (23%), Positives = 176/430 (40%), Gaps = 114/430 (26%)
Query: 20 SDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKS 79
S E + + C+ + G+Q+H+ + + GL + + NS++ +Y+KC + A +
Sbjct: 267 SPNEFTFAAVISGCATLGRIEWGEQLHAHVIRRGLVDSLSVANSIMAMYSKCWQLDLAST 326
Query: 80 MFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREA 139
+F S D +S+++MI G+AQ C EA
Sbjct: 327 VFQGLSRRD-------------------------------IISWSTMISGYAQGGCGEEA 355
Query: 140 LEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNM 199
+ MR G PNE ASV+S ++ + + + LH V+ + ++ ++ + L+NM
Sbjct: 356 FDYLSWMRREGPRPNEFAFASVLSVCGNMAILEQGKQLHAHVLCVGLEQNTMVQSALINM 415
Query: 200 YCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMI 259
Y C S+ EA +FDE + NIVSW M+NG+A+ G + A +LF+++P
Sbjct: 416 YSKCGSIKEASKIFDEAEYNNIVSWTAMINGYAEHGYSQEAIDLFKKLPKV--------- 466
Query: 260 DGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFD 319
G+ P+ V + +++AC H+ +V GF
Sbjct: 467 ----------------------GLRPDSVTFIAVLAACS-----------HAGLVDLGF- 492
Query: 320 CYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNM 379
H++ + L+++ KDH + +I R G + DA + +M
Sbjct: 493 ----------HYFNS-----LSKVHQICPSKDH---YGCMIDLLCRAGRLNDAESMIQSM 534
Query: 380 Q-KRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNE----------ITMVSVFCA 428
+RD WS ++ HG VD G + E +T +++
Sbjct: 535 PFQRDDVVWSTLLRACR-----------IHGDVDCGKRAAEKILQLDPNCAVTHITLANM 583
Query: 429 IASSGTLKEG 438
A+ G KE
Sbjct: 584 YAAKGKWKEA 593
>gi|357129947|ref|XP_003566620.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial-like [Brachypodium distachyon]
Length = 902
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 185/641 (28%), Positives = 317/641 (49%), Gaps = 94/641 (14%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E VS L C+ + G+Q+ + K+ ++++ F+ N+ +++++K G I AK++F+
Sbjct: 301 EFTYVSVLGACAHLDSHCLGRQVQCVTIKNCMDASLFVANATLDMHSKFGAIDDAKTLFN 360
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+ D V S+ ++++G N+ EA+ +
Sbjct: 361 LITYKDTV-------------------------------SWNALLVGLTHNEEDEEAIHM 389
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
+ M + GV P+EV+ A+VI++ ++ + +H L +K + +
Sbjct: 390 LKGMNLDGVTPDEVSFATVINACSNIRATETGKQIHCLAMK----------------HSI 433
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
CS+ SL D ++K G VE R++ ++ + +V +I G
Sbjct: 434 CSNHAVGSSLIDF---------------YSKHGDVESCRKVLAQVDASSIVPRNVLIAGL 478
Query: 263 LQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD 322
+Q R EA+ +++ +L DG+ P+ ++S C ++ G Q+H +K+GF
Sbjct: 479 VQNNREDEAIDLFQQVLRDGLKPSSFTFSSILSGCTGLLSSIIGKQVHCYTLKSGF---- 534
Query: 323 FIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNM-QK 381
+ D + +L+ +++ M EDA +L M
Sbjct: 535 --------------------------LNDDTSVGVSLVGTYLKARMPEDANKLLIEMPDH 568
Query: 382 RDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWA 441
+++ W+A++SGYAQN +L F M V P+E+T S+ A + L +G+
Sbjct: 569 KNLVEWTAIVSGYAQNGYSYQSLLSFWRMRSYDVHPDEVTFASILKACSEMTALSDGKEI 628
Query: 442 HEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHG 501
H ++ + ++AIIDMY+KCG I ++FE F ++ + ++ WN++I G A +G
Sbjct: 629 HGLIIKSGFGSYKTATSAIIDMYSKCGDIISSFEAFKELKSKQ-DITLWNSMILGFAKNG 687
Query: 502 DANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHY 561
A+ L ++ ++ IK + +TF+GVL C HAGL+ G YF SM VY + P + HY
Sbjct: 688 YADEALLLFQKMQDSQIKSDEVTFLGVLIACAHAGLISEGRHYFDSMSKVYGIMPRVDHY 747
Query: 562 GCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQP 621
C +DLLGR G L++A+EVI +P + D VIW T LAA R+H + E GE AAK L L+P
Sbjct: 748 ACFIDLLGRGGHLQEAQEVINELPFRPDGVIWATYLAACRMHKDEERGEIAAKELVELEP 807
Query: 622 SHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
+ + VLLSN+YA AG W +A R+ MR+ G + PG S
Sbjct: 808 QNSSTYVLLSNMYAAAGNWVEAKMAREAMREKGATKFPGCS 848
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 149/622 (23%), Positives = 269/622 (43%), Gaps = 107/622 (17%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
+ L + L CS A+ G+Q H K GL S F +L+N+YA+CG + A+ +F
Sbjct: 31 QFDLAATLSACSRLGALVSGKQAHCDAEKRGLGSGAFCAAALVNMYARCGRVGDARRVFG 90
Query: 83 SCSTLDPVACNIMISGYIRNDR-----------------------------------LND 107
S D V MISGY R R L D
Sbjct: 91 GISLPDTVCWASMISGYHRAGRFQEAVCLFTRMEKMGSSPDRVTCVAVVCALTALGRLED 150
Query: 108 AREVFDKTPI-KCCVSYTSMIMGFAQND-CWREALEVFRDMRILGVIPNEVTLASVISSS 165
AR + + P V++ ++I G+AQ E +++DMR G+ P T AS++S++
Sbjct: 151 ARTLLHRMPAPSSTVAWNAVISGYAQQSGIEHEVFGLYKDMRCWGLWPTRSTFASMLSAA 210
Query: 166 VHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWN 225
+ E R +H ++ +D V + ++L+N+Y C + +A +FD E
Sbjct: 211 ANATAFIEGRQVHAAAVRHGLDANVFVGSSLINLYAKCGCIGDAILVFDCSGE------- 263
Query: 226 VMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAP 285
K+VV W M++G ++ E EA+ M+ M G+
Sbjct: 264 ------------------------KNVVMWNAMLNGLVRNEYQVEAIQMFLYMKRLGLEA 299
Query: 286 NDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQF 345
++ V ++ AC + G Q+ + +K D F+
Sbjct: 300 DEFTYVSVLGACAHLDSHCLGRQVQCVTIKNCMDASLFVA-------------------- 339
Query: 346 ELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALE 405
NA + + G I+DA+ LFN + +D SW+A++ G NE+ A+
Sbjct: 340 -----------NATLDMHSKFGAIDDAKTLFNLITYKDTVSWNALLVGLTHNEEDEEAIH 388
Query: 406 LFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYA 465
+ GM GV P+E++ +V A ++ + G+ H + +SI N + +++ID Y+
Sbjct: 389 MLKGMNLDGVTPDEVSFATVINACSNIRATETGKQIHCLAMKHSICSNHAVGSSLIDFYS 448
Query: 466 KCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITF 525
K G + + +V + +S+ P N +I GL + + + ++ + + +K +S TF
Sbjct: 449 KHGDVESCRKVLAQV--DASSIVPRNVLIAGLVQNNREDEAIDLFQQVLRDGLKPSSFTF 506
Query: 526 IGVLSTCCHAGLVD--LGER-YFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIR 582
+LS C GL+ +G++ + ++KS + + D +V +A EDA +++
Sbjct: 507 SSILSGC--TGLLSSIIGKQVHCYTLKSGF-LNDDTSVGVSLVGTYLKARMPEDANKLLI 563
Query: 583 SMPMKADVVIWGTLLAASRIHG 604
MP ++V W +++ +G
Sbjct: 564 EMPDHKNLVEWTAIVSGYAQNG 585
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 115/496 (23%), Positives = 214/496 (43%), Gaps = 75/496 (15%)
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
GV P++ LA+ +S+ LG + + H K + + L+NMY C + +A
Sbjct: 26 GVRPDQFDLAATLSACSRLGALVSGKQAHCDAEKRGLGSGAFCAAALVNMYARCGRVGDA 85
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKA----------------------------------- 234
R +F + + V W M++G+ +A
Sbjct: 86 RRVFGGISLPDTVCWASMISGYHRAGRFQEAVCLFTRMEKMGSSPDRVTCVAVVCALTAL 145
Query: 235 GLVELARELFERIPS-KDVVSWGTMIDGYLQVERLS-EALTMYRAMLCDGIAPNDVMIVD 292
G +E AR L R+P+ V+W +I GY Q + E +Y+ M C G+ P
Sbjct: 146 GRLEDARTLLHRMPAPSSTVAWNAVISGYAQQSGIEHEVFGLYKDMRCWGLWPTRSTFAS 205
Query: 293 LISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDH 352
++SA A AF EG Q+H+ V+ G D F+ +++I+ YA CG I A L F+ + +
Sbjct: 206 MLSAAANATAFIEGRQVHAAAVRHGLDANVFVGSSLINLYAKCGCIGDAILVFDCSGEKN 265
Query: 353 IASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVD 412
+ WNA++ G +RN +A Q+F M++
Sbjct: 266 VVMWNAMLNGLVRNEYQVEAIQMFLYMKR------------------------------- 294
Query: 413 AGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINT 472
G++ +E T VSV A A + GR + N + + ++ A +DM++K G+I+
Sbjct: 295 LGLEADEFTYVSVLGACAHLDSHCLGRQVQCVTIKNCMDASLFVANATLDMHSKFGAIDD 354
Query: 473 AFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTC 532
A +F I + T WNA++ GL + + + + + + + ++F V++ C
Sbjct: 355 AKTLFNLITYKDT--VSWNALLVGLTHNEEDEEAIHMLKGMNLDGVTPDEVSFATVINAC 412
Query: 533 CHAGLVDLGER-YFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVV 591
+ + G++ + +MK +++ + ++D + G +E +V+ + A +
Sbjct: 413 SNIRATETGKQIHCLAMK--HSICSNHAVGSSLIDFYSKHGDVESCRKVLAQ--VDASSI 468
Query: 592 IWGTLLAASRIHGNVE 607
+ +L A + N E
Sbjct: 469 VPRNVLIAGLVQNNRE 484
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 92/363 (25%), Positives = 158/363 (43%), Gaps = 46/363 (12%)
Query: 276 RAMLCD---GIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFY 332
RA C G+ P+ + +SAC R A G Q H K G F A +++ Y
Sbjct: 17 RARRCSAGGGVRPDQFDLAATLSACSRLGALVSGKQAHCDAEKRGLGSGAFCAAALVNMY 76
Query: 333 AACGRINLARLQF-ELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQK---------- 381
A CGR+ AR F + + D + W ++I+G+ R G ++A LF M+K
Sbjct: 77 ARCGRVGDARRVFGGISLPDTVC-WASMISGYHRAGRFQEAVCLFTRMEKMGSSPDRVTC 135
Query: 382 --------------------------RDVYSWSAMISGYAQNEQ-PNMALELFHGMVDAG 414
+W+A+ISGYAQ + L+ M G
Sbjct: 136 VAVVCALTALGRLEDARTLLHRMPAPSSTVAWNAVISGYAQQSGIEHEVFGLYKDMRCWG 195
Query: 415 VKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAF 474
+ P T S+ A A++ EGR H + + + N + +++I++YAKCG I A
Sbjct: 196 LWPTRSTFASMLSAAANATAFIEGRQVHAAAVRHGLDANVFVGSSLINLYAKCGCIGDAI 255
Query: 475 EVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCH 534
VF ++ +V WNA++ GL + ++++ +++ ++ + T++ VL C H
Sbjct: 256 LVFDCSGEK--NVVMWNAMLNGLVRNEYQVEAIQMFLYMKRLGLEADEFTYVSVLGACAH 313
Query: 535 AGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWG 594
LG R + + ++ L +D+ + G ++DA+ + + K D V W
Sbjct: 314 LDSHCLG-RQVQCVTIKNCMDASLFVANATLDMHSKFGAIDDAKTLFNLITYK-DTVSWN 371
Query: 595 TLL 597
LL
Sbjct: 372 ALL 374
>gi|225428647|ref|XP_002281535.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic [Vitis vinifera]
gi|297741370|emb|CBI32501.3| unnamed protein product [Vitis vinifera]
Length = 697
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 184/623 (29%), Positives = 309/623 (49%), Gaps = 96/623 (15%)
Query: 43 QQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRN 102
QQIH+ I SGL NTF+ NSL+N Y CGL++
Sbjct: 41 QQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLA--------------------------- 73
Query: 103 DRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVI 162
DA+++F TP K VS+T +I G A+NDC+ EA++VFR+M + PN VT++SV+
Sbjct: 74 ----DAKQIFHHTPYKNVVSWTILISGLAKNDCFVEAIDVFREMIMGNFKPNAVTISSVL 129
Query: 163 SSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIV 222
+ +LG I + +H ++ +G V + T L++MY
Sbjct: 130 PAFANLGLIRIAKSVHCFWVRGGFEGNVFVETALVDMY---------------------- 167
Query: 223 SWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDG 282
+K G + +AR+LFE + ++VV+W ++ GY EA+ ++ M G
Sbjct: 168 ---------SKFGCMGVARQLFESMSERNVVTWNAIVSGYSDHGFSEEAIDLFNLMRRKG 218
Query: 283 IAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLAR 342
+ + I+ LI A G IH I++ G++ I+ ++ Y
Sbjct: 219 LLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIY---------- 268
Query: 343 LQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNM 402
+ + ++DA ++F+ M +DV +W+ M++G++ +
Sbjct: 269 ---------------------VSHNCVDDAHRVFSEMSVKDVAAWTLMLTGFSSGRHWDR 307
Query: 403 ALELFHGMVD-AGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAII 461
A++ F+ M+ +K + I ++ + + + SG L++GR H + N + +A+I
Sbjct: 308 AIKHFNKMLGIQNLKLDSIALMGILSSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVI 367
Query: 462 DMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLN 521
DMYA CG++ A FY + ++ V WNA+I G M+G + ++ ++ + +
Sbjct: 368 DMYANCGNLEDAKRFFYGMGEK--DVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPD 425
Query: 522 SITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVI 581
TF+ VL C HAG+V G + F M +V P+L+HY C++D+LGRAGQL+ A I
Sbjct: 426 ESTFVSVLYACSHAGMVYEGLQIFYHMVKTSHVIPNLQHYACVIDILGRAGQLDAAYSFI 485
Query: 582 RSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWE 641
+MP + D ++ TLL A RIHGN+++G ++ + ++P+ VLLSN+YA AG WE
Sbjct: 486 NNMPFQPDFDVYSTLLGACRIHGNIKLGHEISQKIFEMEPNDAGYYVLLSNMYALAGNWE 545
Query: 642 DAFSIRKEMRDCGMKRLPGFSGV 664
R +R MK+ PGFS +
Sbjct: 546 GVKMTRASLRSKRMKKDPGFSSI 568
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 106/252 (42%), Gaps = 47/252 (18%)
Query: 3 LDHFHSVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQN 62
+ HF+ + Q L + +AL+ L CS A+ QG+++H+L K+ +N F+ +
Sbjct: 309 IKHFNKMLGIQNLKLDS----IALMGILSSCSHSGALQQGRRVHALAIKTCFANNIFVGS 364
Query: 63 SLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVS 122
++I++YA CG + AK F D V N MI+G
Sbjct: 365 AVIDMYANCGNLEDAKRFFYGMGEKDVVCWNAMIAGN----------------------- 401
Query: 123 YTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVI 182
N +A+++F M+ G+ P+E T SV+ + H G ++E GL I
Sbjct: 402 --------GMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYE-----GLQI 448
Query: 183 KLMIDGFVIISTNLLNMYCV------CSSLVEARSLFDEMK-ERNIVSWNVMLNGFAKAG 235
+ + NL + CV L A S + M + + ++ +L G
Sbjct: 449 FYHMVKTSHVIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFDVYSTLLGACRIHG 508
Query: 236 LVELARELFERI 247
++L E+ ++I
Sbjct: 509 NIKLGHEISQKI 520
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 84/176 (47%), Gaps = 10/176 (5%)
Query: 435 LKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAII 494
LK + H ++ + +T N LS ++++ Y CG + A ++F+H + +V W +I
Sbjct: 37 LKPLQQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPYK--NVVSWTILI 94
Query: 495 CGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVY-- 552
GLA + + ++ ++ N K N++T VL + GL+ R KS+ +
Sbjct: 95 SGLAKNDCFVEAIDVFREMIMGNFKPNAVTISSVLPAFANLGLI----RIAKSVHCFWVR 150
Query: 553 -NVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVE 607
E ++ +VD+ + G + A ++ SM + +VV W +++ HG E
Sbjct: 151 GGFEGNVFVETALVDMYSKFGCMGVARQLFESMSER-NVVTWNAIVSGYSDHGFSE 205
>gi|255572939|ref|XP_002527400.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533210|gb|EEF34966.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 621
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 176/532 (33%), Positives = 281/532 (52%), Gaps = 15/532 (2%)
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
R MR +G + + T VI + ++G + +HG V+++ + + L+ MY
Sbjct: 31 RRMRKIGTLGDGFTFPLVIRACAYMGSFILGKTIHGHVLEMGFQSHLHVGNELIGMYAKL 90
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSK----DVVSWGTMI 259
+ +AR LFD M R+ +SWN M++ +A A E+F+R+ S+ ++V+W ++I
Sbjct: 91 GRMRDARHLFDRMSVRSYISWNTMVSAYAFNYDCNGALEIFQRMESEGMEPNLVTWTSLI 150
Query: 260 DGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFD 319
Y + EA+ ++ M G+ + + +IS C AF IH VK GF+
Sbjct: 151 SSYARSGWHEEAMELFGLMRMKGVEVSGEALAVVISICADLGAFVRAKIIHEYAVKGGFE 210
Query: 320 CYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNM 379
Y F+++ +I Y G +N A F +ASWNALI G+ ++A ++F+ +
Sbjct: 211 EYSFVKSALICVYGKHGDVNGAWNLFLEMKNKSLASWNALITSHAEAGLCDEALEIFSQL 270
Query: 380 QKR--------DVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIAS 431
++ +V SWSA+I G+A + ALELF M A + N +T+ +V A
Sbjct: 271 ERSGDCPRLRPNVVSWSAIIDGFASKGREKEALELFRRMQHAKILANAVTISTVLSLCAE 330
Query: 432 SGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWN 491
L GR H +V+ + N + +++MYAKCG + +F +R +S WN
Sbjct: 331 LAALHLGREIHGHVVRAVMVNNILVGNGLVNMYAKCGCLKEGHMIFEKT-ERKDLIS-WN 388
Query: 492 AIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSV 551
++I G MHG L+ + + K K + +TF+ VLS+C H+GLV G R F M
Sbjct: 389 SMITGYGMHGLGMNALETFDQMIKLGFKPDGVTFVAVLSSCSHSGLVHEGRRLFDQMLKK 448
Query: 552 YNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGER 611
Y +EP ++HY CMVDLLGRAG L +A E++++MP+ + +WG LL + R+H N E+ E
Sbjct: 449 YRIEPQMEHYACMVDLLGRAGLLREASEIVKNMPVAPNACVWGALLNSCRMHNNTEIAEE 508
Query: 612 AAKSLAGLQPSHGP-SRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
A L L + +LLSNIYA +GRWED+ +R + G+K+ PG S
Sbjct: 509 TASHLFNLSHRETTGTYMLLSNIYAASGRWEDSARVRTSAKTKGLKKNPGQS 560
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 138/501 (27%), Positives = 232/501 (46%), Gaps = 53/501 (10%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
+R C+ + G+ IH + + G +S+ + N LI +YAK G + A+ +FD S
Sbjct: 49 IRACAYMGSFILGKTIHGHVLEMGFQSHLHVGNELIGMYAKLGRMRDARHLFDRMSVRSY 108
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKC----CVSYTSMIMGFAQNDCWREALEVFRD 145
++ N M+S Y N N A E+F + + V++TS+I +A++ EA+E+F
Sbjct: 109 ISWNTMVSAYAFNYDCNGALEIFQRMESEGMEPNLVTWTSLISSYARSGWHEEAMELFGL 168
Query: 146 MRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSS 205
MR+ GV + LA VIS LG +++H +K + + + + L+ +Y
Sbjct: 169 MRMKGVEVSGEALAVVISICADLGAFVRAKIIHEYAVKGGFEEYSFVKSALICVYGKHGD 228
Query: 206 LVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSK--------DVVSWGT 257
+ A +LF EMK +++ SWN ++ A+AGL + A E+F ++ +VVSW
Sbjct: 229 VNGAWNLFLEMKNKSLASWNALITSHAEAGLCDEALEIFSQLERSGDCPRLRPNVVSWSA 288
Query: 258 MIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAG 317
+IDG+ R EAL ++R M I N V I ++S C A G +IH +V+A
Sbjct: 289 IIDGFASKGREKEALELFRRMQHAKILANAVTISTVLSLCAELAALHLGREIHGHVVRAV 348
Query: 318 FDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFN 377
+ +++ YA CG + + FE + + SWN++I G+ GM
Sbjct: 349 MVNNILVGNGLVNMYAKCGCLKEGHMIFEKTERKDLISWNSMITGY---GM--------- 396
Query: 378 NMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKE 437
G N ALE F M+ G KP+ +T V+V + + SG + E
Sbjct: 397 --------------HGLGMN-----ALETFDQMIKLGFKPDGVTFVAVLSSCSHSGLVHE 437
Query: 438 GRWAHEYVLNN-SITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSP----WNA 492
GR + +L I A ++D+ + G + A E+ + V+P W A
Sbjct: 438 GRRLFDQMLKKYRIEPQMEHYACMVDLLGRAGLLREASEIV-----KNMPVAPNACVWGA 492
Query: 493 IICGLAMHGDANLTLKIYSDL 513
++ MH + + + S L
Sbjct: 493 LLNSCRMHNNTEIAEETASHL 513
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 96/393 (24%), Positives = 177/393 (45%), Gaps = 61/393 (15%)
Query: 25 ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSC 84
AL + C+ A + + IH K G E +F++++LI +Y K G ++ A ++F
Sbjct: 180 ALAVVISICADLGAFVRAKIIHEYAVKGGFEEYSFVKSALICVYGKHGDVNGAWNLFLEM 239
Query: 85 STLDPVACNIMISGYIRNDRLNDAREVFDKTPIK--C------CVSYTSMIMGFAQNDCW 136
+ N +I+ + ++A E+F + C VS++++I GFA
Sbjct: 240 KNKSLASWNALITSHAEAGLCDEALEIFSQLERSGDCPRLRPNVVSWSAIIDGFASKGRE 299
Query: 137 REALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNL 196
+EALE+FR M+ ++ N VT+++V+S L + R +HG V++ ++ +++ L
Sbjct: 300 KEALELFRRMQHAKILANAVTISTVLSLCAELAALHLGREIHGHVVRAVMVNNILVGNGL 359
Query: 197 LNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWG 256
+NMY C L E +F++ + ++++SWN M+ G+ GL A E F++
Sbjct: 360 VNMYAKCGCLKEGHMIFEKTERKDLISWNSMITGYGMHGLGMNALETFDQ---------- 409
Query: 257 TMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKA 316
M+ G P+ V V ++S+C + EG ++ ++K
Sbjct: 410 ---------------------MIKLGFKPDGVTFVAVLSSCSHSGLVHEGRRLFDQMLKK 448
Query: 317 GFDCYDFIQATIIHFYAAC-----GRINLARLQFELGIKDHIASWNALIAGFIRNG---- 367
Y I+ + H+ AC GR L R E+ +K+ + NA + G + N
Sbjct: 449 ----YR-IEPQMEHY--ACMVDLLGRAGLLREASEI-VKNMPVAPNACVWGALLNSCRMH 500
Query: 368 -----MIEDARQLFNNMQKRDVYSWSAMISGYA 395
E A LFN + ++ + + YA
Sbjct: 501 NNTEIAEETASHLFNLSHRETTGTYMLLSNIYA 533
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 99/243 (40%), Gaps = 72/243 (29%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+ + + L C+ A+ G++IH + ++ + +N + N L+N+YAKCG + + +F+
Sbjct: 319 VTISTVLSLCAELAALHLGREIHGHVVRAVMVNNILVGNGLVNMYAKCGCLKEGHMIFEK 378
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
D ++ N MI+GY + G N ALE F
Sbjct: 379 TERKDLISWNSMITGY--------------------------GMHGLGMN-----ALETF 407
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
M LG P+ VT +V+SS H G ++H
Sbjct: 408 DQMIKLGFKPDGVTFVAVLSSCSHSG------LVH------------------------- 436
Query: 204 SSLVEARSLFDEMK-----ERNIVSWNVMLNGFAKAGLVELARELFERIP-SKDVVSWGT 257
E R LFD+M E + + M++ +AGL+ A E+ + +P + + WG
Sbjct: 437 ----EGRRLFDQMLKKYRIEPQMEHYACMVDLLGRAGLLREASEIVKNMPVAPNACVWGA 492
Query: 258 MID 260
+++
Sbjct: 493 LLN 495
>gi|294463969|gb|ADE77505.1| unknown [Picea sitchensis]
Length = 514
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 157/385 (40%), Positives = 229/385 (59%), Gaps = 2/385 (0%)
Query: 278 MLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGR 337
M+ G+ PN + ++ AC + +G Q H+ I+K GF+ +Q ++H YA CG
Sbjct: 1 MVGKGVKPNQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGS 60
Query: 338 INLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQN 397
+ A F+ + +WNA+I G +N ++ A +LF M +RDV SW+A+I+GYAQN
Sbjct: 61 LEDAGHVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQN 120
Query: 398 EQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLS 457
+ +L +F+ M G+K + M SV A A L+ GR H YV+ + L+ +
Sbjct: 121 GYGDESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVVG 180
Query: 458 AAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRN 517
+A++DMYAK GS+ A +VF + R WN+II G A HG N + ++ + +
Sbjct: 181 SALVDMYAKSGSMEDACQVFDKMPQRNEV--SWNSIITGCAQHGRGNDAVLLFEQMLQAG 238
Query: 518 IKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDA 577
IK N I+F+GVLS C H GLV+ G YF M Y + PD+ HY CM+DLLGRAG L++A
Sbjct: 239 IKPNEISFVGVLSACSHTGLVNEGRGYFNLMTQNYGIVPDVSHYTCMIDLLGRAGCLDEA 298
Query: 578 EEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADA 637
E I MP++ DV +WG LL A RIHGN E+ +R A+ L G++ VLLSNIYA A
Sbjct: 299 ENFINGMPVEPDVSVWGALLGACRIHGNTELAKRIAEHLLGMEVQIAGIYVLLSNIYAAA 358
Query: 638 GRWEDAFSIRKEMRDCGMKRLPGFS 662
G+W+DA +RK M+D G+ + PG+S
Sbjct: 359 GQWDDAAKVRKLMKDRGVMKQPGYS 383
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 110/401 (27%), Positives = 193/401 (48%), Gaps = 34/401 (8%)
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
GV PN+ TL++V+ + + + + + H +IK+ + V++ T L++MY C SL +A
Sbjct: 5 GVKPNQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGSLEDA 64
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLS 269
+FD+M ER+ +WN M+ G A+ ++ A +LF + +DVVSW +I GY Q
Sbjct: 65 GHVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQNGYGD 124
Query: 270 EALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATII 329
E+L ++ M G+ + ++ ++SAC A G Q H+ +V++GF + + ++
Sbjct: 125 ESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVVGSALV 184
Query: 330 HFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSA 389
YA G + A F+ + + SWN++I G
Sbjct: 185 DMYAKSGSMEDACQVFDKMPQRNEVSWNSIITGC-------------------------- 218
Query: 390 MISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNN- 448
AQ+ + N A+ LF M+ AG+KPNEI+ V V A + +G + EGR + N
Sbjct: 219 -----AQHGRGNDAVLLFEQMLQAGIKPNEISFVGVLSACSHTGLVNEGRGYFNLMTQNY 273
Query: 449 SITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLK 508
I + + +ID+ + G ++ A E F + VS W A++ +HG+ L +
Sbjct: 274 GIVPDVSHYTCMIDLLGRAGCLDEA-ENFINGMPVEPDVSVWGALLGACRIHGNTELAKR 332
Query: 509 IYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMK 549
I L +++ I ++ + + AG D + K MK
Sbjct: 333 IAEHLLGMEVQIAGI-YVLLSNIYAAAGQWDDAAKVRKLMK 372
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 96/370 (25%), Positives = 170/370 (45%), Gaps = 62/370 (16%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
+ L + ++ C++ ++ QG+Q H+ I K G ES+ +Q +L+++YA+CG + A +FD
Sbjct: 10 QFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGSLEDAGHVFD 69
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
S N MI+G+ +N + A ++F + + VS+T++I G+AQN E+L V
Sbjct: 70 KMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQNGYGDESLNV 129
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
F MR G+ + + SV+S+ L + R H V++ +++ + L++MY
Sbjct: 130 FNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVVGSALVDMYAK 189
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
S+ +A +FD+M +RN VSWN ++ G A+ G
Sbjct: 190 SGSMEDACQVFDKMPQRNEVSWNSIITGCAQHG--------------------------- 222
Query: 263 LQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD 322
R ++A+ ++ ML GI PN++ V ++SAC EG
Sbjct: 223 ----RGNDAVLLFEQMLQAGIKPNEISFVGVLSACSHTGLVNEGR--------------- 263
Query: 323 FIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ-K 381
G NL + GI ++ + +I R G +++A N M +
Sbjct: 264 -------------GYFNLMTQNY--GIVPDVSHYTCMIDLLGRAGCLDEAENFINGMPVE 308
Query: 382 RDVYSWSAMI 391
DV W A++
Sbjct: 309 PDVSVWGALL 318
>gi|125525262|gb|EAY73376.1| hypothetical protein OsI_01257 [Oryza sativa Indica Group]
Length = 499
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 149/358 (41%), Positives = 221/358 (61%), Gaps = 3/358 (0%)
Query: 308 QIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQF-ELGIKDHIASWNALIAGFIRN 366
Q+HS++V+AG A+++ Y +CG + AR F E + SWN +I G++++
Sbjct: 92 QLHSLLVRAGHAADPHASASLVQAYCSCGSVASARRVFDETAAYADVVSWNVMIDGYVKS 151
Query: 367 GMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVF 426
G + AR+LF+ M R+V SW+ +I YAQ +QP A+E+F M G++P+ + ++SV
Sbjct: 152 GDLARARELFDVMPGRNVVSWTMVIGAYAQMKQPEEAIEVFRRMQVEGIEPDGVALLSVL 211
Query: 427 CAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTS 486
A G + G W H +VL + L AIIDMY KCGS+ A EVF + + S
Sbjct: 212 SACGDLGVVDLGEWVHRFVLRRGLCQEIPLMNAIIDMYVKCGSVKKALEVFEGMEQK--S 269
Query: 487 VSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFK 546
+ W +I G A+HG + ++++ +EK N+ N ITF+ VLS C H GL DLG YFK
Sbjct: 270 IVTWTTMIAGFALHGLGSEAVELFRRMEKENVSPNDITFLAVLSVCSHVGLTDLGRWYFK 329
Query: 547 SMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNV 606
+M S Y ++P ++HYGCM+DLLGRAG L +A +I+ MP KA+ IWG LLAA+R HG+
Sbjct: 330 TMVSQYKIKPRVEHYGCMIDLLGRAGCLMEARGLIQDMPFKANAAIWGALLAAARTHGDT 389
Query: 607 EVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
E+GE+A L L+P + + +LLSNIYA+ RW+ +R MRD G++ +PG S +
Sbjct: 390 ELGEQALLHLIELEPHNSGNYILLSNIYAEQERWDAVRELRISMRDRGLRNVPGASSI 447
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 93/332 (28%), Positives = 159/332 (47%), Gaps = 36/332 (10%)
Query: 177 LHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKE-RNIVSWNVMLNGFAKAG 235
LH L+++ S +L+ YC C S+ AR +FDE ++VSWNVM++G+ K+G
Sbjct: 93 LHSLLVRAGHAADPHASASLVQAYCSCGSVASARRVFDETAAYADVVSWNVMIDGYVKSG 152
Query: 236 LVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLIS 295
+ ARELF+ +P ++VVSW +I Y Q+++ EA+ ++R M +GI P+ V ++ ++S
Sbjct: 153 DLARARELFDVMPGRNVVSWTMVIGAYAQMKQPEEAIEVFRRMQVEGIEPDGVALLSVLS 212
Query: 296 ACGRAMAFGEGLQIHSIIVKAGFDCYDF-IQATIIHFYAACGRINLARLQFELGIKDHIA 354
ACG G +H +++ G C + + II Y CG + A FE + I
Sbjct: 213 ACGDLGVVDLGEWVHRFVLRRGL-CQEIPLMNAIIDMYVKCGSVKKALEVFEGMEQKSIV 271
Query: 355 SWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAG 414
+W +IAGF +G+ +A +LF M+K +
Sbjct: 272 TWTTMIAGFALHGLGSEAVELFRRMEKEN------------------------------- 300
Query: 415 VKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNN-SITLNDNLSAAIIDMYAKCGSINTA 473
V PN+IT ++V + G GRW + +++ I +ID+ + G + A
Sbjct: 301 VSPNDITFLAVLSVCSHVGLTDLGRWYFKTMVSQYKIKPRVEHYGCMIDLLGRAGCLMEA 360
Query: 474 FEVFYHIRDRTTSVSPWNAIICGLAMHGDANL 505
+ + + + + W A++ HGD L
Sbjct: 361 RGLIQDMPFKANA-AIWGALLAAARTHGDTEL 391
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 104/383 (27%), Positives = 183/383 (47%), Gaps = 45/383 (11%)
Query: 44 QIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTL-DPVACNIMISGYIRN 102
Q+HSL+ ++G ++ SL+ Y CG ++ A+ +FD + D V+ N+MI GY+++
Sbjct: 92 QLHSLLVRAGHAADPHASASLVQAYCSCGSVASARRVFDETAAYADVVSWNVMIDGYVKS 151
Query: 103 DRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVI 162
L ARE+FD P + VS+T +I +AQ EA+EVFR M++ G+ P+ V L SV+
Sbjct: 152 GDLARARELFDVMPGRNVVSWTMVIGAYAQMKQPEEAIEVFRRMQVEGIEPDGVALLSVL 211
Query: 163 SSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIV 222
S+ LG + +H V++ + + + +++MY C S+ +A +F+ M++++IV
Sbjct: 212 SACGDLGVVDLGEWVHRFVLRRGLCQEIPLMNAIIDMYVKCGSVKKALEVFEGMEQKSIV 271
Query: 223 SWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDG 282
+W M+ GFA GL A ELF R+ ++V
Sbjct: 272 TWTTMIAGFALHGLGSEAVELFRRMEKENV------------------------------ 301
Query: 283 IAPNDVMIVDLISACGRAMAFGEG-----LQIHSIIVKAGFDCYDFIQATIIHFYAACGR 337
+PND+ + ++S C G + +K + Y +I G
Sbjct: 302 -SPNDITFLAVLSVCSHVGLTDLGRWYFKTMVSQYKIKPRVEHY----GCMIDLLGRAGC 356
Query: 338 INLAR-LQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMI---SG 393
+ AR L ++ K + A W AL+A +G E Q ++ + + ++ I +
Sbjct: 357 LMEARGLIQDMPFKANAAIWGALLAAARTHGDTELGEQALLHLIELEPHNSGNYILLSNI 416
Query: 394 YAQNEQPNMALELFHGMVDAGVK 416
YA+ E+ + EL M D G++
Sbjct: 417 YAEQERWDAVRELRISMRDRGLR 439
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 97/225 (43%), Gaps = 41/225 (18%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+AL+S L C V G+ +H + + GL + N++I++Y KCG + +A +F+
Sbjct: 205 VALLSVLSACGDLGVVDLGEWVHRFVLRRGLCQEIPLMNAIIDMYVKCGSVKKALEVFEG 264
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
K V++T+MI GFA + EA+E+F
Sbjct: 265 MEQ-------------------------------KSIVTWTTMIAGFALHGLGSEAVELF 293
Query: 144 RDMRILGVIPNEVTLASVISSSVHLG----GIWECR-MLHGLVIKLMIDGFVIISTNLLN 198
R M V PN++T +V+S H+G G W + M+ IK ++ + +++
Sbjct: 294 RRMEKENVSPNDITFLAVLSVCSHVGLTDLGRWYFKTMVSQYKIKPRVEHY----GCMID 349
Query: 199 MYCVCSSLVEARSLFDEMK-ERNIVSWNVMLNGFAKAGLVELARE 242
+ L+EAR L +M + N W +L G EL +
Sbjct: 350 LLGRAGCLMEARGLIQDMPFKANAAIWGALLAAARTHGDTELGEQ 394
>gi|345505230|gb|AEN99839.1| chlororespiratory reduction 4 [Nasturtium officinale]
Length = 614
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 187/532 (35%), Positives = 290/532 (54%), Gaps = 45/532 (8%)
Query: 137 REALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNL 196
R AL F M G+ ++ + + V+ + LG + +HG + K I + + L
Sbjct: 104 RRALLWFCLMLENGISVDKFSFSLVLKACSRLGFLKGGMQIHGFLRKTGIWSDLFLQNCL 163
Query: 197 LNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPS--KDVVS 254
+ +Y C L AR +FD M +R+ VS+N M++G+ K GL+E ARELF+ +P K+++S
Sbjct: 164 IGLYLKCGCLGFARQIFDRMPQRDSVSYNSMIDGYIKCGLIESARELFDLMPREMKNLIS 223
Query: 255 WGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIV 314
W +MI GY Q S+ + + + + P DLIS
Sbjct: 224 WNSMISGYAQT---SDGVNIASKLFAE--MPEK----DLIS------------------- 255
Query: 315 KAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQ 374
++I+ Y GR+ A+ F + + + +W +I G+ + G + A+
Sbjct: 256 ----------WNSLIYGYVKHGRMEDAKDLFHVMPRRDVVTWATMIDGYAKLGFVHKAKT 305
Query: 375 LFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGM-VDAGVKPNEITMVSVFCAIASSG 433
LF+ M RDV ++++M++GY QN ALE+F M ++ + P+E T+V V AIA G
Sbjct: 306 LFDQMPHRDVVAYNSMMAGYVQNRHHMEALEIFSDMEKESHLTPDETTLVIVLSAIAQLG 365
Query: 434 TLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAI 493
L + H Y++ L L A+IDMY+KCGSI A VF I ++ S+ WNA+
Sbjct: 366 QLSKAMDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQQAMCVFEGIENK--SIDHWNAM 423
Query: 494 ICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYN 553
I GLA+HG I ++E+R+I+ + ITF+GVL+ C H+GLV G F+ M+ +
Sbjct: 424 IGGLAIHGLGESAFNILLEIERRSIEPDYITFVGVLNACSHSGLVKEGLLCFELMRRKHK 483
Query: 554 VEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAA 613
+EP L+HYGCMVDLL R G +E A+ +I MP++ + VIW T L A H E+GE A
Sbjct: 484 IEPRLQHYGCMVDLLSRCGSIELAKNLIEEMPIEPNDVIWRTFLTACNHHKEFEIGELVA 543
Query: 614 KSLAGLQPSHGPSR-VLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
K L LQ + PS VLLSN+YA GRW+D ++R M++ ++++PG S +
Sbjct: 544 KHLI-LQAGYNPSSYVLLSNMYASFGRWKDVRNVRTMMKERKLQKVPGCSWI 594
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 127/449 (28%), Positives = 210/449 (46%), Gaps = 75/449 (16%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
L+ CS + G QIH + K+G+ S+ F+QN LI LY KCG + A+ +FD D
Sbjct: 129 LKACSRLGFLKGGMQIHGFLRKTGIWSDLFLQNCLIGLYLKCGCLGFARQIFDRMPQRDS 188
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTP--IKCCVSYTSMIMGFAQNDCWREALEVFRDMR 147
V+ N MI GYI+ + ARE+FD P +K +S+ SMI G+AQ
Sbjct: 189 VSYNSMIDGYIKCGLIESARELFDLMPREMKNLISWNSMISGYAQTS------------- 235
Query: 148 ILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLV 207
+ V +AS + + M + +I +L+ Y +
Sbjct: 236 ------DGVNIASKLFAE-------------------MPEKDLISWNSLIYGYVKHGRME 270
Query: 208 EARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVER 267
+A+ LF M R++V+W M++G+AK G V A+ LF+++P +DVV++ +M+ GY+Q
Sbjct: 271 DAKDLFHVMPRRDVVTWATMIDGYAKLGFVHKAKTLFDQMPHRDVVAYNSMMAGYVQNRH 330
Query: 268 LSEALTMYRAMLCDG-IAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQA 326
EAL ++ M + + P++ +V ++SA + + + +H IV+ F +
Sbjct: 331 HMEALEIFSDMEKESHLTPDETTLVIVLSAIAQLGQLSKAMDMHLYIVEKQFYLGGKLGV 390
Query: 327 TIIHFYAACGRINLARLQFELGIKDH-IASWNALIAGFIRNGMIEDARQLFNNMQKRDVY 385
+I Y+ CG I A FE GI++ I WNA+I G +G+ E A + +++R
Sbjct: 391 ALIDMYSKCGSIQQAMCVFE-GIENKSIDHWNAMIGGLAIHGLGESAFNILLEIERR--- 446
Query: 386 SWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYV 445
++P+ IT V V A + SG +KEG E +
Sbjct: 447 ----------------------------SIEPDYITFVGVLNACSHSGLVKEGLLCFELM 478
Query: 446 -LNNSITLNDNLSAAIIDMYAKCGSINTA 473
+ I ++D+ ++CGSI A
Sbjct: 479 RRKHKIEPRLQHYGCMVDLLSRCGSIELA 507
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 111/395 (28%), Positives = 186/395 (47%), Gaps = 39/395 (9%)
Query: 236 LVELARELFERI------PS--KDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPND 287
L E AR +F P KD W +I + AL + ML +GI+ +
Sbjct: 63 LAEFARYVFREYHVCSFAPGDVKDPFLWNLVIKSHSHGVDPRRALLWFCLMLENGISVDK 122
Query: 288 VMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFEL 347
++ AC R G+QIH + K G F+Q +I Y CG + AR F+
Sbjct: 123 FSFSLVLKACSRLGFLKGGMQIHGFLRKTGIWSDLFLQNCLIGLYLKCGCLGFARQIFDR 182
Query: 348 GIKDHIASWNALIAGFIRNGMIEDARQLFNNMQK--RDVYSWSAMISGYAQ-NEQPNMAL 404
+ S+N++I G+I+ G+IE AR+LF+ M + +++ SW++MISGYAQ ++ N+A
Sbjct: 183 MPQRDSVSYNSMIDGYIKCGLIESARELFDLMPREMKNLISWNSMISGYAQTSDGVNIAS 242
Query: 405 ELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLS-AAIIDM 463
+LF M + + I+ S+ G +K GR L + + D ++ A +ID
Sbjct: 243 KLFAEMPEKDL----ISWNSLI-----YGYVKHGRMEDAKDLFHVMPRRDVVTWATMIDG 293
Query: 464 YAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKR-NIKLNS 522
YAK G ++ A +F + R V +N+++ G + L+I+SD+EK ++ +
Sbjct: 294 YAKLGFVHKAKTLFDQMPHR--DVVAYNSMMAGYVQNRHHMEALEIFSDMEKESHLTPDE 351
Query: 523 ITFIGVLSTCCHAGLVDLGERYFKSMK-SVYNVEPDLKHYG----CMVDLLGRAGQLEDA 577
T + VLS G + K+M +Y VE G ++D+ + G ++ A
Sbjct: 352 TTLVIVLSAIAQLGQLS------KAMDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQQA 405
Query: 578 EEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERA 612
V + K+ + W ++ IHG +GE A
Sbjct: 406 MCVFEGIENKS-IDHWNAMIGGLAIHG---LGESA 436
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 95/351 (27%), Positives = 155/351 (44%), Gaps = 56/351 (15%)
Query: 26 LVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCS 85
L+S S + S G I S +F E + NSLI Y K G + AK +F
Sbjct: 221 LISWNSMISGYAQTSDGVNIASKLFAEMPEKDLISWNSLIYGYVKHGRMEDAKDLFHVMP 280
Query: 86 TLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRD 145
D V MI GY + ++ A+ +FD+ P + V+Y SM+ G+ QN EALE+F D
Sbjct: 281 RRDVVTWATMIDGYAKLGFVHKAKTLFDQMPHRDVVAYNSMMAGYVQNRHHMEALEIFSD 340
Query: 146 M-RILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCS 204
M + + P+E TL V+S+ LG + + +H +++ + L++MY C
Sbjct: 341 MEKESHLTPDETTLVIVLSAIAQLGQLSKAMDMHLYIVEKQFYLGGKLGVALIDMYSKCG 400
Query: 205 SLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQ 264
S+ +A +F+ ++ ++I WN M+ G A GL E A + L+
Sbjct: 401 SIQQAMCVFEGIENKSIDHWNAMIGGLAIHGLGESAFNIL------------------LE 442
Query: 265 VERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDF- 323
+ER S I P+ + V +++AC HS +VK G C++
Sbjct: 443 IERRS-------------IEPDYITFVGVLNACS-----------HSGLVKEGLLCFELM 478
Query: 324 -----IQATIIHF------YAACGRINLAR-LQFELGIKDHIASWNALIAG 362
I+ + H+ + CG I LA+ L E+ I+ + W +
Sbjct: 479 RRKHKIEPRLQHYGCMVDLLSRCGSIELAKNLIEEMPIEPNDVIWRTFLTA 529
>gi|255559617|ref|XP_002520828.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539959|gb|EEF41537.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 656
Score = 309 bits (791), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 183/580 (31%), Positives = 313/580 (53%), Gaps = 26/580 (4%)
Query: 88 DPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMR 147
D N+ IS ++ +AR+VFD+ P + VSY SMI + +N +A +FR+
Sbjct: 50 DTYESNVKISNLGLRGKVKEARKVFDEMPRRDAVSYASMITVYLKNKDLPQAEILFRE-- 107
Query: 148 ILGVIP--NEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSS 205
IP N V +++IS V G + + R V M++ V T+L++ Y +
Sbjct: 108 ----IPERNVVADSAMISGYVRAGRLDKARQ----VFDQMVERNVFSWTSLVSGYFKIGN 159
Query: 206 LVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQV 265
+ EA LF++M E+N+VSW + G+A+ G ++ AR++F ++P K++++W M+ Y++
Sbjct: 160 VDEAMRLFNQMPEKNVVSWTTAVVGYAQNGFIDEARDIFNQMPEKNIIAWTAMVKSYVEN 219
Query: 266 ERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQ 325
+ + EA ++ M + ++MI S C A E +Q+ + + + +
Sbjct: 220 DEIDEAFELFYQMPQRNLYSWNIMI----SGCINANRLNEAIQLFNSMPQRN----EVSW 271
Query: 326 ATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVY 385
T++ A G + LAR F+ IA+WNA+I ++ G + +A LFN M ++++
Sbjct: 272 TTLVTGLARNGMMELARKYFDHMPTKDIAAWNAMITAYVDQGSMAEASNLFNLMPEKNIV 331
Query: 386 SWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYV 445
SW+A+I GYA+N + +L M+ + KPNE T+ SV A S L + AH V
Sbjct: 332 SWNALIDGYARNGPESNSLRYLILMLRSNFKPNETTITSVLTACDSILELMQ---AHGLV 388
Query: 446 LNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANL 505
++ + L+ ++ Y++CG + +A +F + + + W A+I + HG
Sbjct: 389 IHLGFEQDKVLANGLVTTYSRCGDVLSARFIFDQLEIK--DIVSWTAMILAYSNHGCGPH 446
Query: 506 TLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMV 565
L++++ + + K + ITF+G+LS C HAGLV G+ F SM Y VEP +HY C+V
Sbjct: 447 ALQVFARMLRSGAKPDGITFVGLLSACSHAGLVKKGQMLFDSMSCAYGVEPRAEHYSCLV 506
Query: 566 DLLGRAGQLEDAEEVIRSM-PMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHG 624
D+LGRAG++ A +V+ M P + D + G LL A R+H +V + + L +P+
Sbjct: 507 DILGRAGEMNKAMKVVSEMPPHECDGAVLGALLGACRLHKDVGLANHIGEKLIEKEPTSS 566
Query: 625 PSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
S VLL+N YA G+W + +RKEM++ +K+ PGFS +
Sbjct: 567 GSYVLLANAYAACGKWNEFAEVRKEMKERNVKKEPGFSQI 606
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 128/531 (24%), Positives = 233/531 (43%), Gaps = 99/531 (18%)
Query: 48 LIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLND 107
++F+ E N +++I+ Y + G + +A+ +FD + + ++SGY + +++
Sbjct: 103 ILFREIPERNVVADSAMISGYVRAGRLDKARQVFDQMVERNVFSWTSLVSGYFKIGNVDE 162
Query: 108 AREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVH 167
A +F++ P K VS+T+ ++G+AQN EA ++F M +I +++ S V
Sbjct: 163 AMRLFNQMPEKNVVSWTTAVVGYAQNGFIDEARDIFNQMPEKNII----AWTAMVKSYVE 218
Query: 168 LGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVM 227
I E L + + + + I+ + +N + L EA LF+ M +RN VSW +
Sbjct: 219 NDEIDEAFELFYQMPQRNLYSWNIMISGCIN----ANRLNEAIQLFNSMPQRNEVSWTTL 274
Query: 228 LNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAM--------- 278
+ G A+ G++ELAR+ F+ +P+KD+ +W MI Y+ ++EA ++ M
Sbjct: 275 VTGLARNGMMELARKYFDHMPTKDIAAWNAMITAYVDQGSMAEASNLFNLMPEKNIVSWN 334
Query: 279 -LCDGIA---------------------PNDVMIVDLISACGRAMAFGEGLQIHSIIVKA 316
L DG A PN+ I +++AC + E +Q H +++
Sbjct: 335 ALIDGYARNGPESNSLRYLILMLRSNFKPNETTITSVLTACDSIL---ELMQAHGLVIHL 391
Query: 317 GFDCYDFIQATIIHFYAACGRINLARLQF-ELGIKDHIASWNALIAGFIRNGMIEDARQL 375
GF+ + ++ Y+ CG + AR F +L IKD I SW A+I + +G
Sbjct: 392 GFEQDKVLANGLVTTYSRCGDVLSARFIFDQLEIKD-IVSWTAMILAYSNHGC------- 443
Query: 376 FNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTL 435
P+ AL++F M+ +G KP+ IT V + A + +G +
Sbjct: 444 -----------------------GPH-ALQVFARMLRSGAKPDGITFVGLLSACSHAGLV 479
Query: 436 KEGRWAHEYVLNNSITLNDNLSAA------------IIDMYAKCGSINTAFEVFYHIRDR 483
K+G+ L D++S A ++D+ + G +N A +V +
Sbjct: 480 KKGQ-----------MLFDSMSCAYGVEPRAEHYSCLVDILGRAGEMNKAMKVVSEMPPH 528
Query: 484 TTSVSPWNAIICGLAMHGDANLTLKIYSDL-EKRNIKLNSITFIGVLSTCC 533
+ A++ +H D L I L EK S + C
Sbjct: 529 ECDGAVLGALLGACRLHKDVGLANHIGEKLIEKEPTSSGSYVLLANAYAAC 579
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 66/155 (42%), Gaps = 34/155 (21%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E + S L C + + + Q H L+ G E + + N L+ Y++CG + A+ +FD
Sbjct: 365 ETTITSVLTACDSILELMQA---HGLVIHLGFEQDKVLANGLVTTYSRCGDVLSARFIFD 421
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
IK VS+T+MI+ ++ + C AL+V
Sbjct: 422 QLE-------------------------------IKDIVSWTAMILAYSNHGCGPHALQV 450
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRML 177
F M G P+ +T ++S+ H G + + +ML
Sbjct: 451 FARMLRSGAKPDGITFVGLLSACSHAGLVKKGQML 485
>gi|125602089|gb|EAZ41414.1| hypothetical protein OsJ_25936 [Oryza sativa Japonica Group]
Length = 1165
Score = 309 bits (791), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 190/612 (31%), Positives = 309/612 (50%), Gaps = 47/612 (7%)
Query: 62 NSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCV 121
N+L+ Y + G + A+ +FD + D ++ +++ Y L AR VFD P +
Sbjct: 42 NALLTSYGRRGRLRDAQLLFDQMPSRDVISWTALLTAYADGGDLASARLVFDDMPRRNAP 101
Query: 122 SYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHG-- 179
S+ +++ + + R A +F M N V+ ++IS G+ + MLH
Sbjct: 102 SWNALLSVYLRAARPRAAHALFYKM----PAKNAVSYGAIIS------GLAKAEMLHEAE 151
Query: 180 LVIKLMIDGF--VIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLV 237
LV + M + + S L+ Y L A +F+ M R+++SW+ M++G K G V
Sbjct: 152 LVYEEMPWQWRDPVGSNALMAGYLRVGELAMALRVFEGMTVRDVISWSAMVDGLCKHGSV 211
Query: 238 ELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISAC 297
AR +F+ +P ++VVSW +MI GY++ + L ++ M +G+ N + + AC
Sbjct: 212 SEARRVFDAMPERNVVSWTSMIRGYVKRGMCRDGLLLFLNMRREGVQVNTTTLSVALDAC 271
Query: 298 GRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWN 357
A EG+QIH++I+ GF+ F+ +II Y+ G + A+ F+ + I SWN
Sbjct: 272 AAASLAREGIQIHNLIISMGFELDIFLGDSIIIMYSRFGWMVDAKRAFDCMQQKDIVSWN 331
Query: 358 ALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMV------ 411
+LI G++++ M+E+A LF M ++D SW++M+ G+A ++ELF M
Sbjct: 332 SLITGYVQHDMVEEAHVLFKLMHQKDAVSWTSMVVGFANRGWMRESVELFEQMPVKDEVA 391
Query: 412 -------------------------DAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVL 446
G KPN I + A+AS L +GR AH Y +
Sbjct: 392 WTAIISSFITNGDYLSAVRWFCRMSQEGCKPNTIAFSCLLSALASLAMLNQGRQAHAYSI 451
Query: 447 NNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLT 506
N + + +++ MYAKCG + A+ VF I + S+ N++I HG
Sbjct: 452 NMGWVFDSAVHTSLVSMYAKCGRLAEAYHVFSSISN--PSLIAINSMITAFVQHGFVEDA 509
Query: 507 LKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVD 566
LK+++ ++ K N +TF+G+L+ C AG V G YF+SM+ VY VEP+ +HY CMVD
Sbjct: 510 LKLFTKMQNAGYKPNHVTFLGILTGCARAGFVQQGYNYFESMRPVYGVEPNPEHYTCMVD 569
Query: 567 LLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPS 626
LLGRAG L +A E+I SMP W LL+AS +H N+ + AA+ L P +
Sbjct: 570 LLGRAGLLAEALEMINSMPQNDHSDAWAALLSASSLHSNLAFAKIAAQKLLEKDPYDATA 629
Query: 627 RVLLSNIYADAG 638
+LS +++ AG
Sbjct: 630 YTVLSRMFSSAG 641
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 100/441 (22%), Positives = 206/441 (46%), Gaps = 59/441 (13%)
Query: 10 FNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYA 69
N ++ +Q + L++ AL C+A +G QIH+LI G E + F+ +S+I +Y+
Sbjct: 250 LNMRREGVQVNTTTLSV--ALDACAAASLAREGIQIHNLIISMGFELDIFLGDSIIIMYS 307
Query: 70 KCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMG 129
+ G + AK FD D V+ N +I+GY+++D + +A +F K VS+TSM++G
Sbjct: 308 RFGWMVDAKRAFDCMQQKDIVSWNSLITGYVQHDMVEEAHVLFKLMHQKDAVSWTSMVVG 367
Query: 130 FAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGI-WECRMLHGLVIKLMIDG 188
FA RE++E+F M + + ++S I++ +L + W CRM +G
Sbjct: 368 FANRGWMRESVELFEQMPVKDEVAWTAIISSFITNGDYLSAVRWFCRMSQ--------EG 419
Query: 189 FVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNV-----------MLNGFAKAGLV 237
N + C+ S+L + ++ ++ ++ + S N+ +++ +AK G +
Sbjct: 420 ---CKPNTIAFSCLLSALA-SLAMLNQGRQAHAYSINMGWVFDSAVHTSLVSMYAKCGRL 475
Query: 238 ELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISAC 297
A +F I + +++ +MI ++Q + +AL ++ M G PN V + +++ C
Sbjct: 476 AEAYHVFSSISNPSLIAINSMITAFVQHGFVEDALKLFTKMQNAGYKPNHVTFLGILTGC 535
Query: 298 GRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWN 357
RA V+ G++ ++ ++ G++ + +
Sbjct: 536 ARAG-----------FVQQGYNYFESMRPV-------------------YGVEPNPEHYT 565
Query: 358 ALIAGFIRNGMIEDARQLFNNMQKRD-VYSWSAMISGYAQNEQPNMALELFHGMVDAGVK 416
++ R G++ +A ++ N+M + D +W+A++S A + N+A
Sbjct: 566 CMVDLLGRAGLLAEALEMINSMPQNDHSDAWAALLS--ASSLHSNLAFAKIAAQKLLEKD 623
Query: 417 PNEITMVSVFCAIASSGTLKE 437
P + T +V + SS +++
Sbjct: 624 PYDATAYTVLSRMFSSAGMED 644
>gi|296080932|emb|CBI18728.3| unnamed protein product [Vitis vinifera]
Length = 607
Score = 309 bits (791), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 157/438 (35%), Positives = 253/438 (57%), Gaps = 29/438 (6%)
Query: 227 MLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPN 286
+L +K ++ A +F+ + +V + +IDG++ +A+ +Y ML D I P+
Sbjct: 70 LLRSCSKCHAIDYASRIFQYTHNPNVYLYTALIDGFVSSGNYFDAIQLYSRMLHDSILPD 129
Query: 287 DVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFE 346
+ ++ ++ ACG +A EG ++HS +K G ++ I+ Y CG + AR FE
Sbjct: 130 NYLMASILKACGSQLALREGREVHSRALKLGLSSNRLVRLRIMELYGKCGELGDARRVFE 189
Query: 347 LGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALEL 406
+D +A +D W+AMI G+ +NE+ N ALE
Sbjct: 190 EMPEDVVA---------------------------KDTVCWTAMIDGFVRNEEMNRALEA 222
Query: 407 FHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAK 466
F GM V+PNE T+V V A + G L+ GRW H Y+ I LN + A+I+MY++
Sbjct: 223 FRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNALINMYSR 282
Query: 467 CGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFI 526
CGSI+ A VF ++DR V +N +I GL+M+G + ++++ + R ++ ++TF+
Sbjct: 283 CGSIDEAQTVFDEMKDR--DVITYNTMISGLSMNGKSRQAIELFRVMIGRRLRPTNVTFV 340
Query: 527 GVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPM 586
GVL+ C H GLVD G + F SM Y VEP ++HYGCMVDLLGR G+LE+A ++IR+M M
Sbjct: 341 GVLNACSHGGLVDFGFKIFHSMTRDYGVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTMKM 400
Query: 587 KADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSI 646
D ++ GTLL+A ++H N+E+GE+ AK L + + VLLS++YA +G+W++A +
Sbjct: 401 TPDHIMLGTLLSACKMHKNLELGEQVAKVLEDRGQADSGTYVLLSHVYASSGKWKEAAQV 460
Query: 647 RKEMRDCGMKRLPGFSGV 664
R +M++ GM++ PG S +
Sbjct: 461 RAKMKEAGMQKEPGCSSI 478
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 99/357 (27%), Positives = 161/357 (45%), Gaps = 81/357 (22%)
Query: 26 LVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCS 85
+ S L+ C + +A+ +G+++HS K GL SN ++ ++ LY KCG
Sbjct: 133 MASILKACGSQLALREGREVHSRALKLGLSSNRLVRLRIMELYGKCG------------- 179
Query: 86 TLDPVACNIMISGYIRNDRLNDAREVFDKTP----IKCCVSYTSMIMGFAQNDCWREALE 141
L DAR VF++ P K V +T+MI GF +N+ ALE
Sbjct: 180 ------------------ELGDARRVFEEMPEDVVAKDTVCWTAMIDGFVRNEEMNRALE 221
Query: 142 VFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYC 201
FR M+ V PNE T+ V+S+ LG + R +H + K I+ + + L+NMY
Sbjct: 222 AFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNALINMYS 281
Query: 202 VCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELF-----ERIPSKDVV--- 253
C S+ EA+++FDEMK+R+++++N M++G + G A ELF R+ +V
Sbjct: 282 RCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIELFRVMIGRRLRPTNVTFVG 341
Query: 254 --------------------------------SWGTMIDGYLQVERLSEALTMYRAMLCD 281
+G M+D +V RL EA + R M
Sbjct: 342 VLNACSHGGLVDFGFKIFHSMTRDYGVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTM--- 398
Query: 282 GIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAG-FDCYDFIQATIIHFYAACGR 337
+ P+ +M+ L+SAC G Q+ ++ G D ++ + H YA+ G+
Sbjct: 399 KMTPDHIMLGTLLSACKMHKNLELGEQVAKVLEDRGQADSGTYV--LLSHVYASSGK 453
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 116/530 (21%), Positives = 223/530 (42%), Gaps = 104/530 (19%)
Query: 2 PLDHFHSVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQ 61
P H NS +L++ D + ++S L+ S HI +Q IH+ + ++G + F+
Sbjct: 12 PSPKPHPNSNSNPKSLKSLD-QKQIISLLQR-SKHI--NQVLPIHAQLIRNGHSQDPFMV 67
Query: 62 NSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCV 121
L+ +KC I A +F T +P N+ +
Sbjct: 68 FELLRSCSKCHAIDYASRIFQY--THNP---NVYL------------------------- 97
Query: 122 SYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLV 181
YT++I GF + + +A++++ M ++P+ +AS++ + + E R +H
Sbjct: 98 -YTALIDGFVSSGNYFDAIQLYSRMLHDSILPDNYLMASILKACGSQLALREGREVHSRA 156
Query: 182 IKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELAR 241
+KL + ++ ++ +Y C L +AR +F+EM E
Sbjct: 157 LKLGLSSNRLVRLRIMELYGKCGELGDARRVFEEMPED---------------------- 194
Query: 242 ELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAM 301
+ +KD V W MIDG+++ E ++ AL +R M + + PN+ IV ++SAC +
Sbjct: 195 -----VVAKDTVCWTAMIDGFVRNEEMNRALEAFRGMQGENVRPNEFTIVCVLSACSQLG 249
Query: 302 AFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIA 361
A G +HS + K + F+ +I+ Y+ CG I+ A+ F+ + ++N +I+
Sbjct: 250 ALEIGRWVHSYMRKFEIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMIS 309
Query: 362 GFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEIT 421
G NG +RQ A+ELF M+ ++P +T
Sbjct: 310 GLSMNG---KSRQ----------------------------AIELFRVMIGRRLRPTNVT 338
Query: 422 MVSVFCAIASSGTLKEG-RWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHI 480
V V A + G + G + H + + ++D+ + G + A+++
Sbjct: 339 FVGVLNACSHGGLVDFGFKIFHSMTRDYGVEPQIEHYGCMVDLLGRVGRLEEAYDLI--- 395
Query: 481 RDRTTSVSP----WNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFI 526
RT ++P ++ MH + L ++ LE R + +S T++
Sbjct: 396 --RTMKMTPDHIMLGTLLSACKMHKNLELGEQVAKVLEDRG-QADSGTYV 442
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 71/315 (22%), Positives = 139/315 (44%), Gaps = 35/315 (11%)
Query: 293 LISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDH 352
+IS R+ + L IH+ +++ G F+ ++ + C I+ A F+ +
Sbjct: 35 IISLLQRSKHINQVLPIHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIFQYTHNPN 94
Query: 353 IASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVD 412
+ + ALI GF+ +G DA QL++ M+
Sbjct: 95 VYLYTALIDGFVSSGNYFDAIQLYSR-------------------------------MLH 123
Query: 413 AGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINT 472
+ P+ M S+ A S L+EGR H L ++ N + I+++Y KCG +
Sbjct: 124 DSILPDNYLMASILKACGSQLALREGREVHSRALKLGLSSNRLVRLRIMELYGKCGELGD 183
Query: 473 AFEVFYHIRDRTTSVSP--WNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLS 530
A VF + + + W A+I G + + N L+ + ++ N++ N T + VLS
Sbjct: 184 ARRVFEEMPEDVVAKDTVCWTAMIDGFVRNEEMNRALEAFRGMQGENVRPNEFTIVCVLS 243
Query: 531 TCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADV 590
C G +++G R+ S + +E +L ++++ R G +++A+ V M + DV
Sbjct: 244 ACSQLGALEIG-RWVHSYMRKFEIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDR-DV 301
Query: 591 VIWGTLLAASRIHGN 605
+ + T+++ ++G
Sbjct: 302 ITYNTMISGLSMNGK 316
>gi|359491588|ref|XP_002281032.2| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g61800 [Vitis vinifera]
Length = 576
Score = 309 bits (791), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 168/431 (38%), Positives = 249/431 (57%), Gaps = 5/431 (1%)
Query: 234 AGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDL 293
A L A +F RIP+ + TMI + + AL ++ M + P+
Sbjct: 76 AALTGYALSVFNRIPNPSTFGYNTMIRAHTLLSSPLAALVIFVRMRRLSVPPDTHTFPFC 135
Query: 294 ISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQF-ELGIKDH 352
+ AC A +HS K GF F+ T+IH Y+ ++ A F E +KD
Sbjct: 136 LKACSLLPALSLAQTLHSQAFKFGFGADLFVCNTLIHVYSVNKHLHHACQVFNETSLKD- 194
Query: 353 IASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNM-ALELFHGMV 411
+ S+NALI GFI+ G + AR+LF+ M RD SW +++GYAQ+ M A++LF+ M+
Sbjct: 195 VVSYNALIGGFIKVGDTDRARRLFDKMPIRDAVSWGTLLAGYAQSGDLCMDAIQLFNRML 254
Query: 412 DAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSIN 471
+ V+P+ I +VS A A G L++G+ H Y+ N I +N LS ++D+YAKCG I
Sbjct: 255 ISTVRPDNIALVSALSACAQLGELEQGKSIHVYIKQNRIPINAFLSTGLVDLYAKCGCIE 314
Query: 472 TAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLST 531
TA E+F D+ ++ WNA++ GL MHG +L+L +S + + IK + ++F+G+L
Sbjct: 315 TAREIFESSPDK--NLFTWNALLVGLGMHGRGHLSLHYFSRMIEAGIKPDGVSFLGILVG 372
Query: 532 CCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVV 591
C HAGLV +F+ M+ VY V +LKHYGCM DLLGRAG + +A E+I MPM DV
Sbjct: 373 CGHAGLVCEARNFFQEMEVVYRVPRELKHYGCMADLLGRAGLIREAMEMIERMPMGGDVF 432
Query: 592 IWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMR 651
+WG +L RIHGNVE+ E+AA+++ L P ++++IYA+AGRWED IR+ M
Sbjct: 433 VWGGVLGGCRIHGNVEIAEKAAENVMALNPEDDGVYSIMADIYANAGRWEDVARIRRLMH 492
Query: 652 DCGMKRLPGFS 662
+K+ PG S
Sbjct: 493 SRQVKKNPGCS 503
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 116/489 (23%), Positives = 207/489 (42%), Gaps = 62/489 (12%)
Query: 27 VSALRYCSAHIAVSQGQQIHSLIFKSGL-----ESNTFIQNSLINLYAKCGLISQAKSMF 81
++ +R C + + Q Q+H+ +GL S+ + N L A L+ +
Sbjct: 19 ITVIRQCKS---LKQLHQVHAHTITTGLLWGLHHSSLLLTNILTAFTA---LLPTTNA-- 70
Query: 82 DSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALE 141
S P A ++GY A VF++ P Y +MI AL
Sbjct: 71 ---SPTTPAA----LTGY--------ALSVFNRIPNPSTFGYNTMIRAHTLLSSPLAALV 115
Query: 142 VFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYC 201
+F MR L V P+ T + + L + + LH K + + L+++Y
Sbjct: 116 IFVRMRRLSVPPDTHTFPFCLKACSLLPALSLAQTLHSQAFKFGFGADLFVCNTLIHVYS 175
Query: 202 VCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDG 261
V L A +F+E +++VS+N ++ GF K G + AR LF+++P +D VSWGT++ G
Sbjct: 176 VNKHLHHACQVFNETSLKDVVSYNALIGGFIKVGDTDRARRLFDKMPIRDAVSWGTLLAG 235
Query: 262 YLQVERLS-EALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDC 320
Y Q L +A+ ++ ML + P+++ +V +SAC + +G IH I +
Sbjct: 236 YAQSGDLCMDAIQLFNRMLISTVRPDNIALVSALSACAQLGELEQGKSIHVYIKQNRIPI 295
Query: 321 YDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ 380
F+ ++ YA CG I AR FE ++ +WNAL+ G +G
Sbjct: 296 NAFLSTGLVDLYAKCGCIETAREIFESSPDKNLFTWNALLVGLGMHG------------- 342
Query: 381 KRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGR- 439
+ +++L F M++AG+KP+ ++ + + +G + E R
Sbjct: 343 ------------------RGHLSLHYFSRMIEAGIKPDGVSFLGILVGCGHAGLVCEARN 384
Query: 440 WAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAM 499
+ E + + + D+ + G I A E+ + V W ++ G +
Sbjct: 385 FFQEMEVVYRVPRELKHYGCMADLLGRAGLIREAMEMIERM-PMGGDVFVWGGVLGGCRI 443
Query: 500 HGDANLTLK 508
HG+ + K
Sbjct: 444 HGNVEIAEK 452
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 97/244 (39%), Gaps = 72/244 (29%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+ALVSAL C+ + QG+ IH I ++ + N F+ L++LYAKCG I
Sbjct: 263 IALVSALSACAQLGELEQGKSIHVYIKQNRIPINAFLSTGLVDLYAKCGCIET------- 315
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
ARE+F+ +P K ++ ++++G + +L F
Sbjct: 316 ------------------------AREIFESSPDKNLFTWNALLVGLGMHGRGHLSLHYF 351
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
M G+ P+ V+ ++ H G VC
Sbjct: 352 SRMIEAGIKPDGVSFLGILVGCGHAG-------------------------------LVC 380
Query: 204 SSLVEARSLFDEMK-----ERNIVSWNVMLNGFAKAGLVELARELFERIP-SKDVVSWGT 257
EAR+ F EM+ R + + M + +AGL+ A E+ ER+P DV WG
Sbjct: 381 ----EARNFFQEMEVVYRVPRELKHYGCMADLLGRAGLIREAMEMIERMPMGGDVFVWGG 436
Query: 258 MIDG 261
++ G
Sbjct: 437 VLGG 440
>gi|224123788|ref|XP_002319164.1| predicted protein [Populus trichocarpa]
gi|222857540|gb|EEE95087.1| predicted protein [Populus trichocarpa]
Length = 989
Score = 308 bits (790), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 195/639 (30%), Positives = 313/639 (48%), Gaps = 95/639 (14%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+ + S L C+++ A+ +G+Q+HS + K+G+ S+ ++ +L++LY C I A MF +
Sbjct: 315 VTVASLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAHEMFLT 374
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
T + V N+M+ + + D L+ E+ +F
Sbjct: 375 AQTENVVLWNVMLVAFGKLDNLS-------------------------------ESFRIF 403
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
R M+I G+IPN+ T S++ + +G + +H VIK GF N+Y VC
Sbjct: 404 RQMQIKGLIPNQFTYPSILRTCTSVGALDLGEQIHTQVIK---TGF------QFNVY-VC 453
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYL 263
S V+++ +AK G ++ A + + DVVSW +I GY
Sbjct: 454 S---------------------VLIDMYAKHGKLDTAHVILRTLTEDDVVSWTALISGYA 492
Query: 264 QVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDF 323
Q +EAL ++ ML GI +++ ISAC A +G QIH+ +G+
Sbjct: 493 QHNLFAEALKHFKEMLNRGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYVSGYS---- 548
Query: 324 IQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRD 383
+ ++ NAL++ + R G I++A F + +D
Sbjct: 549 ---------------------------EDLSIGNALVSLYARCGRIKEAYLEFEKIDAKD 581
Query: 384 VYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHE 443
SW+ +ISG+AQ+ AL++F M A ++ + T S A A+ +K+G+ H
Sbjct: 582 SISWNGLISGFAQSGYCEDALKVFAQMNRAKLEASFFTFGSAVSAAANIANIKQGKQIHA 641
Query: 444 YVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDA 503
++ + +S A+I YAKCGSI A F + ++ WNA+I G + HG
Sbjct: 642 MIIKRGFDSDIEVSNALITFYAKCGSIEDARREFCEMPEKNDV--SWNAMITGYSQHGYG 699
Query: 504 NLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGC 563
N + ++ +++ N +TF+GVLS C H GLV G YF+SM + + P HY C
Sbjct: 700 NEAVNLFEKMKQVGEMPNHVTFVGVLSACSHVGLVTKGLGYFESMSKEHGLVPKPAHYAC 759
Query: 564 MVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSH 623
+VDL+ RAG L A + I MP++ D IW TLL+A +H NVEVGE AA+ L L+P
Sbjct: 760 VVDLISRAGFLSRARKFIEEMPIEPDATIWRTLLSACTVHKNVEVGEFAAQHLLELEPED 819
Query: 624 GPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
+ VLLSN+YA +G+W+ R+ MR+ G+K+ PG S
Sbjct: 820 SATYVLLSNMYAVSGKWDCRDQTRQMMRNRGVKKEPGRS 858
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 159/677 (23%), Positives = 270/677 (39%), Gaps = 139/677 (20%)
Query: 20 SDYELALVSALRYCSAH-IAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAK 78
S E++ S LR CS H I + +QIH+ I GL + I N LI LYAK GLI A+
Sbjct: 108 SPTEISFASVLRACSGHRIGIRYAEQIHARIICHGLLCSPIISNPLIGLYAKNGLIISAR 167
Query: 79 SMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWRE 138
+FD+ T D V+ MIS GF+QN E
Sbjct: 168 KVFDNLCTKDSVSWVAMIS-------------------------------GFSQNGYEEE 196
Query: 139 ALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLN 198
A+ +F +M G+ P +SV+S + LH LV K + L+
Sbjct: 197 AIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALVFKYGSSLETYVCNALVT 256
Query: 199 MYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIP---------- 248
+Y + V A +F +M+ ++ VS+N +++G A+ G + A ELF ++
Sbjct: 257 LYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGALELFTKMKRDYLKPDCVT 316
Query: 249 -----------------------------SKDVVSWGTMIDGYL---------------- 263
S D++ G ++D Y+
Sbjct: 317 VASLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAHEMFLTAQ 376
Query: 264 ---------------QVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQ 308
+++ LSE+ ++R M G+ PN ++ C A G Q
Sbjct: 377 TENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSILRTCTSVGALDLGEQ 436
Query: 309 IHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGM 368
IH+ ++K GF ++ + +I YA G+++ A + +D + SW ALI+G+ ++ +
Sbjct: 437 IHTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAHVILRTLTEDDVVSWTALISGYAQHNL 496
Query: 369 IEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCA 428
+ AL+ F M++ G++ + I S A
Sbjct: 497 FAE-------------------------------ALKHFKEMLNRGIQSDNIGFSSAISA 525
Query: 429 IASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVS 488
A L +GR H + + + ++ A++ +YA+CG I A+ F I D S+S
Sbjct: 526 CAGIQALNQGRQIHAQSYVSGYSEDLSIGNALVSLYARCGRIKEAYLEFEKI-DAKDSIS 584
Query: 489 PWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSM 548
WN +I G A G LK+++ + + ++ + TF +S + + G++ +M
Sbjct: 585 -WNGLISGFAQSGYCEDALKVFAQMNRAKLEASFFTFGSAVSAAANIANIKQGKQ-IHAM 642
Query: 549 KSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIH--GNV 606
+ D++ ++ + G +EDA MP K DV W ++ H GN
Sbjct: 643 IIKRGFDSDIEVSNALITFYAKCGSIEDARREFCEMPEKNDVS-WNAMITGYSQHGYGNE 701
Query: 607 EVGERAAKSLAGLQPSH 623
V G P+H
Sbjct: 702 AVNLFEKMKQVGEMPNH 718
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 132/520 (25%), Positives = 238/520 (45%), Gaps = 73/520 (14%)
Query: 88 DPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMR 147
+ V CN ++ Y L+ +VF+ P + S+ +I GF + L++F M
Sbjct: 44 ESVLCNKLVDVYFALGDLDGVVKVFEDMPNRSVRSWDKIISGFMEKKMSNRVLDLFSCMI 103
Query: 148 ILGVIPNEVTLASVISS-SVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSL 206
V P E++ ASV+ + S H GI +H +I + IIS L+ +Y +
Sbjct: 104 EENVSPTEISFASVLRACSGHRIGIRYAEQIHARIICHGLLCSPIISNPLIGLYAKNGLI 163
Query: 207 VEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVE 266
+ AR +FD + ++ VSW M++GF++ G E
Sbjct: 164 ISARKVFDNLCTKDSVSWVAMISGFSQNGYEE---------------------------- 195
Query: 267 RLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQA 326
EA+ ++ M GI P + ++S C + F G Q+H+++ K G ++
Sbjct: 196 ---EAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALVFKYGSSLETYV-- 250
Query: 327 TIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYS 386
C NAL+ + R A ++F+ MQ +D S
Sbjct: 251 --------C---------------------NALVTLYSRMPNFVSAEKVFSKMQSKDEVS 281
Query: 387 WSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVL 446
++++ISG AQ + ALELF M +KP+ +T+ S+ A AS+G L +G H YV+
Sbjct: 282 FNSLISGLAQQGFSDGALELFTKMKRDYLKPDCVTVASLLSACASNGALCKGEQLHSYVI 341
Query: 447 NNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLT 506
I+ + + A++D+Y C I TA E+F + +T +V WN ++ + + +
Sbjct: 342 KAGISSDMIVEGALLDLYVNCSDIKTAHEMF--LTAQTENVVLWNVMLVAFGKLDNLSES 399
Query: 507 LKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGER-YFKSMKSVYNVEPDLKHYGC-- 563
+I+ ++ + + N T+ +L TC G +DLGE+ + + +K+ + Y C
Sbjct: 400 FRIFRQMQIKGLIPNQFTYPSILRTCTSVGALDLGEQIHTQVIKTGFQFNV----YVCSV 455
Query: 564 MVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIH 603
++D+ + G+L+ A ++R++ + DVV W L++ H
Sbjct: 456 LIDMYAKHGKLDTAHVILRTLT-EDDVVSWTALISGYAQH 494
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 103/455 (22%), Positives = 196/455 (43%), Gaps = 67/455 (14%)
Query: 146 MRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSS 205
M G+ N T ++ ++ G + EC+ LHG ++KL ++ L+++Y
Sbjct: 1 MEHRGICANCQTYIWLLDLCLNSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGD 60
Query: 206 LVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQV 265
L +G K +FE +P++ V SW +I G+++
Sbjct: 61 L----------------------DGVVK---------VFEDMPNRSVRSWDKIISGFMEK 89
Query: 266 ERLSEALTMYRAMLCDGIAPNDVMIVDLISAC-GRAMAFGEGLQIHSIIVKAGFDCYDFI 324
+ + L ++ M+ + ++P ++ ++ AC G + QIH+ I+ G C I
Sbjct: 90 KMSNRVLDLFSCMIEENVSPTEISFASVLRACSGHRIGIRYAEQIHARIICHGLLCSPII 149
Query: 325 QATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDV 384
+I YA +NG+I AR++F+N+ +D
Sbjct: 150 SNPLIGLYA-------------------------------KNGLIISARKVFDNLCTKDS 178
Query: 385 YSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEY 444
SW AMISG++QN A+ LF M AG+ P SV G H
Sbjct: 179 VSWVAMISGFSQNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHAL 238
Query: 445 VLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDAN 504
V +L + A++ +Y++ + +A +VF ++ + +N++I GLA G ++
Sbjct: 239 VFKYGSSLETYVCNALVTLYSRMPNFVSAEKVFSKMQSKDE--VSFNSLISGLAQQGFSD 296
Query: 505 LTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCM 564
L++++ +++ +K + +T +LS C G + GE+ S + D+ G +
Sbjct: 297 GALELFTKMKRDYLKPDCVTVASLLSACASNGALCKGEQ-LHSYVIKAGISSDMIVEGAL 355
Query: 565 VDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAA 599
+DL ++ A E+ + + +VV+W +L A
Sbjct: 356 LDLYVNCSDIKTAHEMFLTAQTE-NVVLWNVMLVA 389
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 151/318 (47%), Gaps = 47/318 (14%)
Query: 3 LDHFHSVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQN 62
L HF + N +Q+ + + SA+ C+ A++QG+QIH+ + SG + I N
Sbjct: 501 LKHFKEMLNR---GIQSDN--IGFSSAISACAGIQALNQGRQIHAQSYVSGYSEDLSIGN 555
Query: 63 SLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVS 122
+L++LYA+CG I +A F+ D ++ N +ISG
Sbjct: 556 ALVSLYARCGRIKEAYLEFEKIDAKDSISWNGLISG------------------------ 591
Query: 123 YTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVI 182
FAQ+ +AL+VF M + + T S +S++ ++ I + + +H ++I
Sbjct: 592 -------FAQSGYCEDALKVFAQMNRAKLEASFFTFGSAVSAAANIANIKQGKQIHAMII 644
Query: 183 KLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARE 242
K D + +S L+ Y C S+ +AR F EM E+N VSWN M+ G+++ G A
Sbjct: 645 KRGFDSDIEVSNALITFYAKCGSIEDARREFCEMPEKNDVSWNAMITGYSQHGYGNEAVN 704
Query: 243 LFERIPS----KDVVSWGTMIDGYLQVERLSEALTMYRAMLCD-GIAPNDVM---IVDLI 294
LFE++ + V++ ++ V +++ L + +M + G+ P +VDLI
Sbjct: 705 LFEKMKQVGEMPNHVTFVGVLSACSHVGLVTKGLGYFESMSKEHGLVPKPAHYACVVDLI 764
Query: 295 SACG---RAMAFGEGLQI 309
S G RA F E + I
Sbjct: 765 SRAGFLSRARKFIEEMPI 782
>gi|345505210|gb|AEN99829.1| chlororespiratory reduction 4, partial [Barbarea verna]
Length = 588
Score = 308 bits (790), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 183/519 (35%), Positives = 285/519 (54%), Gaps = 45/519 (8%)
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
GV ++ +L+ V+ + LG + E +HG + K I + + L+ +Y C L A
Sbjct: 91 GVSVDKFSLSLVLKACSRLGFVQEGMQIHGFLRKTGIWSDLFLQNCLIGLYLKCGCLGFA 150
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPS--KDVVSWGTMIDGYLQVER 267
R +FD M +R+ VS+N M++G+ K GL+ ARELF+ +P K+++SW +MI GY Q
Sbjct: 151 RQIFDRMPQRDSVSYNSMIDGYVKCGLIGSARELFDLMPKEMKNLISWNSMISGYAQT-- 208
Query: 268 LSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQAT 327
S+ + + + + P DLIS +
Sbjct: 209 -SDGVNIASKLFAE--MPEK----DLIS-----------------------------WNS 232
Query: 328 IIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSW 387
+I Y GR+ A+ F + + + +W +I G+ + G + A+ LF+ M RDV ++
Sbjct: 233 LIDGYVKHGRMEDAKDLFYVMPRRDVVTWATMIDGYAKLGFVHKAKTLFDQMPHRDVVAY 292
Query: 388 SAMISGYAQNEQPNMALELFHGM-VDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVL 446
++M++GY QN+ ALE+F M ++ + P+E T+V V AIA G L + H Y++
Sbjct: 293 NSMMAGYVQNKYNMEALEIFSDMEKESHLSPDETTLVIVLSAIAQLGRLSKAMDMHLYIV 352
Query: 447 NNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLT 506
L L A+IDMY+KCGSI A VF I ++ S+ WNA+I GLA+HG
Sbjct: 353 EKQFFLGGKLGVALIDMYSKCGSIQQAMLVFERIENK--SIDHWNAMIGGLAIHGLGESA 410
Query: 507 LKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVD 566
+ ++E+R+IK + ITF+G+L+ C H+GLV G F+ M+ + +EP L+HYGCMVD
Sbjct: 411 FDMLLEIERRSIKPDDITFVGILNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVD 470
Query: 567 LLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPS 626
+L R+G +E A+ +I MPM+ + VIW T L A H E GE AK L LQ + PS
Sbjct: 471 ILSRSGSIELAKNLIEEMPMEPNDVIWRTFLTACSHHKEFETGEVVAKHLI-LQAGYNPS 529
Query: 627 R-VLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
VLLSN+YA G W+DA +R M++ ++++PG S +
Sbjct: 530 SYVLLSNMYASFGMWKDARRVRTMMKERELQKVPGCSWI 568
Score = 179 bits (453), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 128/456 (28%), Positives = 216/456 (47%), Gaps = 75/456 (16%)
Query: 22 YELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMF 81
+ L+LV L+ CS V +G QIH + K+G+ S+ F+QN LI LY KCG + A+ +F
Sbjct: 97 FSLSLV--LKACSRLGFVQEGMQIHGFLRKTGIWSDLFLQNCLIGLYLKCGCLGFARQIF 154
Query: 82 DSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTP--IKCCVSYTSMIMGFAQNDCWREA 139
D D V+ N MI GY++ + ARE+FD P +K +S+ SMI G+AQ
Sbjct: 155 DRMPQRDSVSYNSMIDGYVKCGLIGSARELFDLMPKEMKNLISWNSMISGYAQTS----- 209
Query: 140 LEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNM 199
+ V +AS + + M + +I +L++
Sbjct: 210 --------------DGVNIASKLFAE-------------------MPEKDLISWNSLIDG 236
Query: 200 YCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMI 259
Y + +A+ LF M R++V+W M++G+AK G V A+ LF+++P +DVV++ +M+
Sbjct: 237 YVKHGRMEDAKDLFYVMPRRDVVTWATMIDGYAKLGFVHKAKTLFDQMPHRDVVAYNSMM 296
Query: 260 DGYLQVERLSEALTMYRAMLCDG-IAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGF 318
GY+Q + EAL ++ M + ++P++ +V ++SA + + + +H IV+ F
Sbjct: 297 AGYVQNKYNMEALEIFSDMEKESHLSPDETTLVIVLSAIAQLGRLSKAMDMHLYIVEKQF 356
Query: 319 DCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNN 378
+ +I Y+ CG I A L FE I WNA+I G +G+ E A +
Sbjct: 357 FLGGKLGVALIDMYSKCGSIQQAMLVFERIENKSIDHWNAMIGGLAIHGLGESAFDMLLE 416
Query: 379 MQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG 438
+++R +KP++IT V + A + SG +KEG
Sbjct: 417 IERR-------------------------------SIKPDDITFVGILNACSHSGLVKEG 445
Query: 439 RWAHEYV-LNNSITLNDNLSAAIIDMYAKCGSINTA 473
E + + I ++D+ ++ GSI A
Sbjct: 446 LLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELA 481
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 110/395 (27%), Positives = 187/395 (47%), Gaps = 39/395 (9%)
Query: 236 LVELARELFERIPS--------KDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPND 287
L E AR +F+ S +D W +I + AL + ML +G++ +
Sbjct: 37 LAEFARCVFQNYHSCSFAHGEVEDPFLWNAVIKSHSHGVDPKRALIWFCLMLENGVSVDK 96
Query: 288 VMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFEL 347
+ ++ AC R EG+QIH + K G F+Q +I Y CG + AR F+
Sbjct: 97 FSLSLVLKACSRLGFVQEGMQIHGFLRKTGIWSDLFLQNCLIGLYLKCGCLGFARQIFDR 156
Query: 348 GIKDHIASWNALIAGFIRNGMIEDARQLFNNMQK--RDVYSWSAMISGYAQ-NEQPNMAL 404
+ S+N++I G+++ G+I AR+LF+ M K +++ SW++MISGYAQ ++ N+A
Sbjct: 157 MPQRDSVSYNSMIDGYVKCGLIGSARELFDLMPKEMKNLISWNSMISGYAQTSDGVNIAS 216
Query: 405 ELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLS-AAIIDM 463
+LF M + + I+ S+ G +K GR L + D ++ A +ID
Sbjct: 217 KLFAEMPEKDL----ISWNSLI-----DGYVKHGRMEDAKDLFYVMPRRDVVTWATMIDG 267
Query: 464 YAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKR-NIKLNS 522
YAK G ++ A +F + R V +N+++ G + L+I+SD+EK ++ +
Sbjct: 268 YAKLGFVHKAKTLFDQMPHR--DVVAYNSMMAGYVQNKYNMEALEIFSDMEKESHLSPDE 325
Query: 523 ITFIGVLSTCCHAGLVDLGERYFKSMK-SVYNVEPDLKHYG----CMVDLLGRAGQLEDA 577
T + VLS G R K+M +Y VE G ++D+ + G ++ A
Sbjct: 326 TTLVIVLSAIAQLG------RLSKAMDMHLYIVEKQFFLGGKLGVALIDMYSKCGSIQQA 379
Query: 578 EEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERA 612
V + K+ + W ++ IHG +GE A
Sbjct: 380 MLVFERIENKS-IDHWNAMIGGLAIHG---LGESA 410
>gi|449437962|ref|XP_004136759.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 591
Score = 308 bits (790), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 177/546 (32%), Positives = 288/546 (52%), Gaps = 67/546 (12%)
Query: 120 CVSY-TSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLH 178
C+S ++I ++N +E +M ++G+ P+ T+ V+ + + GI E + +H
Sbjct: 74 CLSLCNAIIRSISRNSINLSPMEFLNEMLVVGLEPDGFTIPLVLKALALIQGIREGQQIH 133
Query: 179 GLVIKLMIDGF-VIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLV 237
IK + GF V +S L+ +Y VC S+ + + +FDE
Sbjct: 134 ARSIKTGMVGFNVYVSNTLMRLYSVCGSIHDVQKVFDE---------------------- 171
Query: 238 ELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCD-GIAPNDVMIVDLISA 296
P +D+VSW T+I + + S A+ + M CD + + +V ++SA
Sbjct: 172 ---------CPHRDLVSWTTLIQAFTKAGLYSRAVEAFMEM-CDLRLRADGRTLVVVLSA 221
Query: 297 CGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASW 356
C G ++HS I + + +K +
Sbjct: 222 CSNLGDLNLGQKVHSYI------------------------------RHYIDMKADVFVG 251
Query: 357 NALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVK 416
NAL+ +++ + A ++F+ M ++V +W+AMISG A + AL+ F M D GVK
Sbjct: 252 NALLDMYLKCDDLNSAYKVFDEMPVKNVVTWNAMISGLAYQGRYREALDTFRMMQDKGVK 311
Query: 417 PNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEV 476
P+E+T+V V + A+ G L+ G+W H Y+ N I + + A++DMYAKCGSI+ AF V
Sbjct: 312 PDEVTLVGVLNSCANLGVLEIGKWVHAYMRRNHILADKFVGNALLDMYAKCGSIDEAFRV 371
Query: 477 FYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAG 536
F ++ R V + A+I GLA+HG+AN +++S++ + I+ N +TF+G+L C H G
Sbjct: 372 FESMKRR--DVYSYTAMIFGLALHGEANWAFQVFSEMFRVGIEPNEVTFLGLLMACSHGG 429
Query: 537 LVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTL 596
LV G++YF M Y + P +HYGCM+DLLGRAG +++AEE+I M ++ DV G L
Sbjct: 430 LVAEGKKYFFQMSDKYKLRPQAEHYGCMIDLLGRAGLVKEAEEIIHKMEIRPDVFACGAL 489
Query: 597 LAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMK 656
L A RIHGNV++GE + L L P + +L++N+Y+ RW+DA IRK M++ M+
Sbjct: 490 LGACRIHGNVDIGESVMQKLTELDPDEEGTYILMTNLYSSVHRWKDALKIRKTMKNKKMR 549
Query: 657 RLPGFS 662
+ PG S
Sbjct: 550 KTPGCS 555
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 142/603 (23%), Positives = 251/603 (41%), Gaps = 151/603 (25%)
Query: 38 AVSQGQQIHSLIFKSGLES-NTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMI 96
+ +GQQIH+ K+G+ N ++ N+L+ LY+ CG I
Sbjct: 125 GIREGQQIHARSIKTGMVGFNVYVSNTLMRLYSVCGSI---------------------- 162
Query: 97 SGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEV 156
+D ++VFD+ P + VS+T++I F + + A+E F +M L + +
Sbjct: 163 ---------HDVQKVFDECPHRDLVSWTTLIQAFTKAGLYSRAVEAFMEMCDLRLRADGR 213
Query: 157 TLASVISSSVHLGGIWECRMLHGLV---IKLMIDGFVIISTNLLNMYCVCSSLVEARSLF 213
TL V+S+ +LG + + +H + I + D FV LL+MY C L A +F
Sbjct: 214 TLVVVLSACSNLGDLNLGQKVHSYIRHYIDMKADVFV--GNALLDMYLKCDDLNSAYKVF 271
Query: 214 DEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALT 273
DEM +N+V+WN M++G A G R EAL
Sbjct: 272 DEMPVKNVVTWNAMISGLAYQG-------------------------------RYREALD 300
Query: 274 MYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYA 333
+R M G+ P++V +V ++++C G +H+ + + F+ ++ YA
Sbjct: 301 TFRMMQDKGVKPDEVTLVGVLNSCANLGVLEIGKWVHAYMRRNHILADKFVGNALLDMYA 360
Query: 334 ACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISG 393
CG I+ +A ++F +M++RDVYS++AMI G
Sbjct: 361 KCGSID-------------------------------EAFRVFESMKRRDVYSYTAMIFG 389
Query: 394 YAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLN 453
A + + N A ++F M G++PNE+T + + A + G + EG+ + + +++ L
Sbjct: 390 LALHGEANWAFQVFSEMFRVGIEPNEVTFLGLLMACSHGGLVAEGK-KYFFQMSDKYKLR 448
Query: 454 DNLS--AAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYS 511
+ID+ + G + A E+ + + R + CG
Sbjct: 449 PQAEHYGCMIDLLGRAGLVKEAEEIIHKMEIRP------DVFACG--------------- 487
Query: 512 DLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLK-HYGCMVDLLGR 570
+L C G VD+GE M+ + ++PD + Y M +L
Sbjct: 488 ---------------ALLGACRIHGNVDIGE---SVMQKLTELDPDEEGTYILMTNLYSS 529
Query: 571 AGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLL 630
+ +DA ++ ++M K G L + G V + K SH S+V++
Sbjct: 530 VHRWKDALKIRKTMKNKKMRKTPGCSLI--EVDGVVHEFRKGDK-------SHPRSKVII 580
Query: 631 SNI 633
+NI
Sbjct: 581 ANI 583
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/369 (25%), Positives = 159/369 (43%), Gaps = 94/369 (25%)
Query: 25 ALVSALRYCSAHIAVSQGQQIHSLIFKS-GLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
LV L CS ++ GQ++HS I ++++ F+ N+L+++Y KC
Sbjct: 214 TLVVVLSACSNLGDLNLGQKVHSYIRHYIDMKADVFVGNALLDMYLKC------------ 261
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
D LN A +VFD+ P+K V++ +MI G A +REAL+ F
Sbjct: 262 -------------------DDLNSAYKVFDEMPVKNVVTWNAMISGLAYQGRYREALDTF 302
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
R M+ GV P+EVTL V++S +LG + + +H + + I + LL+MY C
Sbjct: 303 RMMQDKGVKPDEVTLVGVLNSCANLGVLEIGKWVHAYMRRNHILADKFVGNALLDMYAKC 362
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYL 263
S+ EA +F+ MK R++ S+ M+ G A G A ++F
Sbjct: 363 GSIDEAFRVFESMKRRDVYSYTAMIFGLALHGEANWAFQVFSE----------------- 405
Query: 264 QVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDF 323
M+R GI PN+V + L+ AC EG +
Sbjct: 406 ----------MFRV----GIEPNEVTFLGLLMACSHGGLVAEGKK--------------- 436
Query: 324 IQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKR- 382
+F+ + L R Q E + +I R G++++A ++ + M+ R
Sbjct: 437 ------YFFQMSDKYKL-RPQAE--------HYGCMIDLLGRAGLVKEAEEIIHKMEIRP 481
Query: 383 DVYSWSAMI 391
DV++ A++
Sbjct: 482 DVFACGALL 490
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 117/265 (44%), Gaps = 44/265 (16%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E+ LV L C+ + G+ +H+ + ++ + ++ F+ N+L+++YAKCG I +A +F+
Sbjct: 314 EVTLVGVLNSCANLGVLEIGKWVHAYMRRNHILADKFVGNALLDMYAKCGSIDEAFRVFE 373
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
S R+V+ SYT+MI G A + A +V
Sbjct: 374 SMKR----------------------RDVY---------SYTAMIFGLALHGEANWAFQV 402
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTN-----LL 197
F +M +G+ PNEVT ++ + H G + E + M D + + ++
Sbjct: 403 FSEMFRVGIEPNEVTFLGLLMACSHGGLVAEGKK----YFFQMSDKYKLRPQAEHYGCMI 458
Query: 198 NMYCVCSSLVEARSLFDEMKER-NIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWG 256
++ + EA + +M+ R ++ + +L G V++ + +++ D G
Sbjct: 459 DLLGRAGLVKEAEEIIHKMEIRPDVFACGALLGACRIHGNVDIGESVMQKLTELDPDEEG 518
Query: 257 T---MIDGYLQVERLSEALTMYRAM 278
T M + Y V R +AL + + M
Sbjct: 519 TYILMTNLYSSVHRWKDALKIRKTM 543
>gi|359485688|ref|XP_002275048.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Vitis vinifera]
gi|297739328|emb|CBI28979.3| unnamed protein product [Vitis vinifera]
Length = 585
Score = 308 bits (790), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 196/624 (31%), Positives = 302/624 (48%), Gaps = 103/624 (16%)
Query: 40 SQGQQIHSLIFKSGLESNTFIQNSLIN-LYAKCGLISQAKSMFDSCSTLDPVACNIMISG 98
SQ QIH+ + + L S+TF + L++ + +K ++ A+ +F + CN M+
Sbjct: 25 SQILQIHAQLITTNLISDTFAASRLLDSVVSKTLNVNYAELVFAQIHQPNSFICNTMVKC 84
Query: 99 YIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTL 158
Y + TP AL + +MR G++ + T
Sbjct: 85 YTESS-----------TP--------------------ERALRFYAEMRRKGLLGDNYTY 113
Query: 159 ASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKE 218
V+ + + G+ E ++ G +K G V + L++MYC C AR++FD
Sbjct: 114 PFVLKACGAMCGLLEGGLVQGEAVKRGFGGDVFVVNGLISMYCRCGETGWARAVFD---- 169
Query: 219 RNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAM 278
GF++ KD+VSW +M+ GY+ + A M+ M
Sbjct: 170 -----------GFSE----------------KDLVSWNSMLGGYVWCGEMENAQNMFDEM 202
Query: 279 LCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRI 338
+ +MI G+ M G +
Sbjct: 203 PERDVVSWSIMI----DGYGKKM----------------------------------GEV 224
Query: 339 NLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNE 398
N AR+ F+ + SWN++I G+ + G +E AR++F+ M +++V SWS MI GYAQ+
Sbjct: 225 NRARVFFDSMPTRDLVSWNSMIDGYAKVGEMEVAREIFDKMLQKNVISWSIMIDGYAQHR 284
Query: 399 QPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSA 458
AL LF M+ G+KP+ +++V A + G L +GRW H Y+ N + L+ +
Sbjct: 285 DSKEALNLFRQMLCQGIKPDRVSVVGAVSACSQLGALDQGRWIHLYMKRNRMLLDIVVQT 344
Query: 459 AIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNI 518
A++DMY KCGS + A +F + +R +V WN +I GL M+G L+ ++ +E I
Sbjct: 345 ALVDMYLKCGSRDEARRIFNSMPER--NVVSWNVMIVGLGMNGFGKEALECFTQMEMERI 402
Query: 519 KLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAE 578
++ + F+GVL C HA LV G F MK VY +EP L+HYGC+VDLLGRAGQL+ +
Sbjct: 403 PMDDLLFLGVLMACSHANLVTEGLHIFNQMKGVYRLEPKLEHYGCLVDLLGRAGQLDQIQ 462
Query: 579 EVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAG 638
+I+SMPMK + +WG+LL A RIH NV + E + LA L+ VL+SNIYAD G
Sbjct: 463 NIIQSMPMKPNAALWGSLLLACRIHQNVTLAEIVVERLAELKADDSGVYVLMSNIYADVG 522
Query: 639 RWEDAFSIRKEMRDCGMKRLPGFS 662
WE IRK M++ MK+ G S
Sbjct: 523 MWEGMLRIRKLMKERKMKKDIGRS 546
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 140/330 (42%), Gaps = 76/330 (23%)
Query: 1 TPLDHFHSVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFI 60
TP ++ L +Y V L+ C A + +G + K G + F+
Sbjct: 90 TPERALRFYAEMRRKGLLGDNYTYPFV--LKACGAMCGLLEGGLVQGEAVKRGFGGDVFV 147
Query: 61 QNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYI-------------------- 100
N LI++Y +CG A+++FD S D V+ N M+ GY+
Sbjct: 148 VNGLISMYCRCGETGWARAVFDGFSEKDLVSWNSMLGGYVWCGEMENAQNMFDEMPERDV 207
Query: 101 ------------RNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF----- 143
+ +N AR FD P + VS+ SMI G+A+ A E+F
Sbjct: 208 VSWSIMIDGYGKKMGEVNRARVFFDSMPTRDLVSWNSMIDGYAKVGEMEVAREIFDKMLQ 267
Query: 144 --------------------------RDMRILGVIPNEVTLASVISSSVHLGGIWECRML 177
R M G+ P+ V++ +S+ LG + + R +
Sbjct: 268 KNVISWSIMIDGYAQHRDSKEALNLFRQMLCQGIKPDRVSVVGAVSACSQLGALDQGRWI 327
Query: 178 HGLVIK---LMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVM-----LN 229
H L +K +++D +++ T L++MY C S EAR +F+ M ERN+VSWNVM +N
Sbjct: 328 H-LYMKRNRMLLD--IVVQTALVDMYLKCGSRDEARRIFNSMPERNVVSWNVMIVGLGMN 384
Query: 230 GFAKAGLVELARELFERIPSKDVVSWGTMI 259
GF K L + ERIP D++ G ++
Sbjct: 385 GFGKEALECFTQMEMERIPMDDLLFLGVLM 414
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 68/129 (52%), Gaps = 6/129 (4%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+++V A+ CS A+ QG+ IH + ++ + + +Q +L+++Y KCG +A+ +F+S
Sbjct: 306 VSVVGAVSACSQLGALDQGRWIHLYMKRNRMLLDIVVQTALVDMYLKCGSRDEARRIFNS 365
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVF-----DKTPIKCCVSYTSMIMGFAQNDCWRE 138
+ V+ N+MI G N +A E F ++ P+ + + ++M + + E
Sbjct: 366 MPERNVVSWNVMIVGLGMNGFGKEALECFTQMEMERIPMDDLL-FLGVLMACSHANLVTE 424
Query: 139 ALEVFRDMR 147
L +F M+
Sbjct: 425 GLHIFNQMK 433
>gi|56783979|dbj|BAD81434.1| pentatricopeptide (PPR) repeat-containing protein -like [Oryza
sativa Japonica Group]
Length = 503
Score = 308 bits (790), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 149/358 (41%), Positives = 220/358 (61%), Gaps = 3/358 (0%)
Query: 308 QIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQF-ELGIKDHIASWNALIAGFIRN 366
Q+HS++V+AG A+++ Y +CG + AR F E + SWN +I G++++
Sbjct: 96 QLHSLLVRAGHAADPHASASLVQAYCSCGSVASARRVFDETAASADVVSWNVMIDGYVKS 155
Query: 367 GMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVF 426
G + AR+LF+ M R+V SW+ +I YAQ +QP A+E+F M G++P+ + ++SV
Sbjct: 156 GDLARARELFDVMPGRNVVSWTMVIGAYAQMKQPEEAIEVFRRMQVEGIEPDGVALLSVL 215
Query: 427 CAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTS 486
A G + G W H +VL + L AIIDMY KCGS+ A EVF + + S
Sbjct: 216 SACGDLGVVDLGEWVHRFVLRRGLCQEIPLMNAIIDMYVKCGSVKKALEVFEGMEQK--S 273
Query: 487 VSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFK 546
+ W +I G A+HG ++++ +EK N+ N ITF+ VLS C H GL DLG YFK
Sbjct: 274 IVTWTTMIAGFALHGLGLEAVELFRRMEKENVSPNDITFLAVLSVCSHVGLTDLGRWYFK 333
Query: 547 SMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNV 606
+M S Y ++P ++HYGCM+DLLGRAG L +A +I+ MP KA+ IWG LLAA+R HG+
Sbjct: 334 TMVSQYKIKPRVEHYGCMIDLLGRAGCLMEARGLIQDMPFKANAAIWGALLAAARTHGDT 393
Query: 607 EVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
E+GE+A L L+P + + +LLSNIYA+ RW+ +R MRD G++ +PG S +
Sbjct: 394 ELGEQALLHLIELEPHNSGNYILLSNIYAEQERWDAVRELRISMRDRGLRNVPGASSI 451
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 93/332 (28%), Positives = 159/332 (47%), Gaps = 36/332 (10%)
Query: 177 LHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMK-ERNIVSWNVMLNGFAKAG 235
LH L+++ S +L+ YC C S+ AR +FDE ++VSWNVM++G+ K+G
Sbjct: 97 LHSLLVRAGHAADPHASASLVQAYCSCGSVASARRVFDETAASADVVSWNVMIDGYVKSG 156
Query: 236 LVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLIS 295
+ ARELF+ +P ++VVSW +I Y Q+++ EA+ ++R M +GI P+ V ++ ++S
Sbjct: 157 DLARARELFDVMPGRNVVSWTMVIGAYAQMKQPEEAIEVFRRMQVEGIEPDGVALLSVLS 216
Query: 296 ACGRAMAFGEGLQIHSIIVKAGFDCYDF-IQATIIHFYAACGRINLARLQFELGIKDHIA 354
ACG G +H +++ G C + + II Y CG + A FE + I
Sbjct: 217 ACGDLGVVDLGEWVHRFVLRRGL-CQEIPLMNAIIDMYVKCGSVKKALEVFEGMEQKSIV 275
Query: 355 SWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAG 414
+W +IAGF +G+ +A +LF M+K +
Sbjct: 276 TWTTMIAGFALHGLGLEAVELFRRMEKEN------------------------------- 304
Query: 415 VKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNN-SITLNDNLSAAIIDMYAKCGSINTA 473
V PN+IT ++V + G GRW + +++ I +ID+ + G + A
Sbjct: 305 VSPNDITFLAVLSVCSHVGLTDLGRWYFKTMVSQYKIKPRVEHYGCMIDLLGRAGCLMEA 364
Query: 474 FEVFYHIRDRTTSVSPWNAIICGLAMHGDANL 505
+ + + + + W A++ HGD L
Sbjct: 365 RGLIQDMPFKANA-AIWGALLAAARTHGDTEL 395
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 104/383 (27%), Positives = 185/383 (48%), Gaps = 45/383 (11%)
Query: 44 QIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD-SCSTLDPVACNIMISGYIRN 102
Q+HSL+ ++G ++ SL+ Y CG ++ A+ +FD + ++ D V+ N+MI GY+++
Sbjct: 96 QLHSLLVRAGHAADPHASASLVQAYCSCGSVASARRVFDETAASADVVSWNVMIDGYVKS 155
Query: 103 DRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVI 162
L ARE+FD P + VS+T +I +AQ EA+EVFR M++ G+ P+ V L SV+
Sbjct: 156 GDLARARELFDVMPGRNVVSWTMVIGAYAQMKQPEEAIEVFRRMQVEGIEPDGVALLSVL 215
Query: 163 SSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIV 222
S+ LG + +H V++ + + + +++MY C S+ +A +F+ M++++IV
Sbjct: 216 SACGDLGVVDLGEWVHRFVLRRGLCQEIPLMNAIIDMYVKCGSVKKALEVFEGMEQKSIV 275
Query: 223 SWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDG 282
+W M+ GFA GL A ELF R+ ++V
Sbjct: 276 TWTTMIAGFALHGLGLEAVELFRRMEKENV------------------------------ 305
Query: 283 IAPNDVMIVDLISACGRAMAFGEG-----LQIHSIIVKAGFDCYDFIQATIIHFYAACGR 337
+PND+ + ++S C G + +K + Y +I G
Sbjct: 306 -SPNDITFLAVLSVCSHVGLTDLGRWYFKTMVSQYKIKPRVEHY----GCMIDLLGRAGC 360
Query: 338 INLAR-LQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMI---SG 393
+ AR L ++ K + A W AL+A +G E Q ++ + + ++ I +
Sbjct: 361 LMEARGLIQDMPFKANAAIWGALLAAARTHGDTELGEQALLHLIELEPHNSGNYILLSNI 420
Query: 394 YAQNEQPNMALELFHGMVDAGVK 416
YA+ E+ + EL M D G++
Sbjct: 421 YAEQERWDAVRELRISMRDRGLR 443
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 97/225 (43%), Gaps = 41/225 (18%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+AL+S L C V G+ +H + + GL + N++I++Y KCG + +A +F+
Sbjct: 209 VALLSVLSACGDLGVVDLGEWVHRFVLRRGLCQEIPLMNAIIDMYVKCGSVKKALEVFEG 268
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
K V++T+MI GFA + EA+E+F
Sbjct: 269 MEQ-------------------------------KSIVTWTTMIAGFALHGLGLEAVELF 297
Query: 144 RDMRILGVIPNEVTLASVISSSVHLG----GIWECR-MLHGLVIKLMIDGFVIISTNLLN 198
R M V PN++T +V+S H+G G W + M+ IK ++ + +++
Sbjct: 298 RRMEKENVSPNDITFLAVLSVCSHVGLTDLGRWYFKTMVSQYKIKPRVEHY----GCMID 353
Query: 199 MYCVCSSLVEARSLFDEMK-ERNIVSWNVMLNGFAKAGLVELARE 242
+ L+EAR L +M + N W +L G EL +
Sbjct: 354 LLGRAGCLMEARGLIQDMPFKANAAIWGALLAAARTHGDTELGEQ 398
>gi|414867142|tpg|DAA45699.1| TPA: hypothetical protein ZEAMMB73_401104 [Zea mays]
Length = 746
Score = 308 bits (790), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 182/573 (31%), Positives = 305/573 (53%), Gaps = 64/573 (11%)
Query: 91 ACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILG 150
A ++ Y+R R+ +A VFD+ P + ++ +M+ G +N +A+ + M G
Sbjct: 104 ASGSLVHAYLRFGRVAEAYRVFDEMPERDVPAWNAMLSGLCRNTRAADAVTLLGRMVGEG 163
Query: 151 VIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEAR 210
V + VTL+SV+ V LG ++H +K + G + + L+++Y L EA
Sbjct: 164 VAGDAVTLSSVLPMCVVLGDRALALVMHVYAVKHGLSGELFVCNALIDVYGKLGMLTEAH 223
Query: 211 SLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSE 270
+F M R D+V+W ++I Q +++
Sbjct: 224 WVFGGMALR-------------------------------DLVTWNSIISANEQGGKVAA 252
Query: 271 ALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIH 330
A+ ++ M+ G+ P+ + +V L SA + C D + A +H
Sbjct: 253 AVELFHGMMESGVCPDVLTLVSLASAVAQ--------------------CGDELGAKSVH 292
Query: 331 FYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAM 390
Y + R +++G I + NA++ + + I+ A+++F+N+ RDV SW+ +
Sbjct: 293 CY-------VRRRGWDVG---DIIAGNAMVDMYAKMSKIDAAQKVFDNLPDRDVVSWNTL 342
Query: 391 ISGYAQNEQPNMALELFHGMVD-AGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNS 449
I+GY QN N A+ +++ M + G+KP + T VSV A + G L++G H +
Sbjct: 343 ITGYMQNGLANEAIRIYNDMHNHEGLKPIQGTFVSVLPAYSYLGGLQQGMRMHALSIKTG 402
Query: 450 ITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKI 509
+ L+ ++ +ID+YAKCG + A +F H+ R+T PWNAII GL +HG L +
Sbjct: 403 LNLDVYVTTCLIDLYAKCGKLVEAMFLFEHMPRRSTG--PWNAIIAGLGVHGHGAKALSL 460
Query: 510 YSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLG 569
+S +++ IK + +TF+ +L+ C HAGLVD G +F M++VY + P KHY CMVD+LG
Sbjct: 461 FSQMQQEEIKPDHVTFVSLLAACSHAGLVDQGRSFFDLMQTVYGIVPIAKHYTCMVDMLG 520
Query: 570 RAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVL 629
RAGQL++A E I+SMP+K D +WG LL A RIHGNVE+G+ A+++L L P + VL
Sbjct: 521 RAGQLDEAFEFIQSMPIKPDSAVWGALLGACRIHGNVEMGKVASQNLFELDPENVGYYVL 580
Query: 630 LSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
+SN+YA G+W+ ++R +R +++ PG+S
Sbjct: 581 MSNMYAKIGKWDGVDAVRSLVRRQNLQKTPGWS 613
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 108/389 (27%), Positives = 196/389 (50%), Gaps = 39/389 (10%)
Query: 220 NIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAML 279
N+ + +++ + + G V A +F+ +P +DV +W M+ G + R ++A+T+ M+
Sbjct: 101 NVFASGSLVHAYLRFGRVAEAYRVFDEMPERDVPAWNAMLSGLCRNTRAADAVTLLGRMV 160
Query: 280 CDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRIN 339
+G+A + V + ++ C + G D A ++H YA
Sbjct: 161 GEGVAGDAVTLSSVLPMC---VVLG-----------------DRALALVMHVYAV----- 195
Query: 340 LARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQ 399
+ G+ + NALI + + GM+ +A +F M RD+ +W+++IS Q +
Sbjct: 196 ------KHGLSGELFVCNALIDVYGKLGMLTEAHWVFGGMALRDLVTWNSIISANEQGGK 249
Query: 400 PNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSA- 458
A+ELFHGM+++GV P+ +T+VS+ A+A G + H YV + D ++
Sbjct: 250 VAAAVELFHGMMESGVCPDVLTLVSLASAVAQCGDELGAKSVHCYVRRRGWDVGDIIAGN 309
Query: 459 AIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEK-RN 517
A++DMYAK I+ A +VF ++ DR V WN +I G +G AN ++IY+D+
Sbjct: 310 AMVDMYAKMSKIDAAQKVFDNLPDR--DVVSWNTLITGYMQNGLANEAIRIYNDMHNHEG 367
Query: 518 IKLNSITFIGVLSTCCHAGLVDLGER-YFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLED 576
+K TF+ VL + G + G R + S+K+ N+ D+ C++DL + G+L +
Sbjct: 368 LKPIQGTFVSVLPAYSYLGGLQQGMRMHALSIKTGLNL--DVYVTTCLIDLYAKCGKLVE 425
Query: 577 AEEVIRSMPMKADVVIWGTLLAASRIHGN 605
A + MP ++ W ++A +HG+
Sbjct: 426 AMFLFEHMPRRS-TGPWNAIIAGLGVHGH 453
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 102/464 (21%), Positives = 188/464 (40%), Gaps = 97/464 (20%)
Query: 45 IHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDR 104
+H K GL F+ N+LI++Y K G++++A +F + D
Sbjct: 190 MHVYAVKHGLSGELFVCNALIDVYGKLGMLTEAHWVFGGMALRD---------------- 233
Query: 105 LNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISS 164
V++ S+I Q A+E+F M GV P+ +TL S+ S+
Sbjct: 234 ---------------LVTWNSIISANEQGGKVAAAVELFHGMMESGVCPDVLTLVSLASA 278
Query: 165 SVHLGGIWECRMLHGLVIKLMID-GFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVS 223
G + +H V + D G +I +++MY S + A+ +FD + +R++VS
Sbjct: 279 VAQCGDELGAKSVHCYVRRRGWDVGDIIAGNAMVDMYAKMSKIDAAQKVFDNLPDRDVVS 338
Query: 224 WNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAML-CDG 282
WN ++ G+ + GL +EA+ +Y M +G
Sbjct: 339 WNTLITGYMQNGLA-------------------------------NEAIRIYNDMHNHEG 367
Query: 283 IAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLAR 342
+ P V ++ A +G+++H++ +K G + ++ +I YA CG++ A
Sbjct: 368 LKPIQGTFVSVLPAYSYLGGLQQGMRMHALSIKTGLNLDVYVTTCLIDLYAKCGKLVEAM 427
Query: 343 LQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNM 402
FE + WNA+IAG +G A LF+ MQ+ +
Sbjct: 428 FLFEHMPRRSTGPWNAIIAGLGVHGHGAKALSLFSQMQQEE------------------- 468
Query: 403 ALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLN-NSITLNDNLSAAII 461
+KP+ +T VS+ A + +G + +GR + + I ++
Sbjct: 469 ------------IKPDHVTFVSLLAACSHAGLVDQGRSFFDLMQTVYGIVPIAKHYTCMV 516
Query: 462 DMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANL 505
DM + G ++ AFE + + S W A++ +HG+ +
Sbjct: 517 DMLGRAGQLDEAFEFIQSMPIKPDSAV-WGALLGACRIHGNVEM 559
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 90/354 (25%), Positives = 153/354 (43%), Gaps = 61/354 (17%)
Query: 49 IFKSGLESNTFIQNSLINLYAKCGLISQAKSMF-----DSCSTLDPVACNIMISGYIRND 103
+ +SG+ + SL + A+CG AKS+ D +A N M+ Y +
Sbjct: 260 MMESGVCPDVLTLVSLASAVAQCGDELGAKSVHCYVRRRGWDVGDIIAGNAMVDMYAKMS 319
Query: 104 RLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMR-ILGVIPNEVTLASVI 162
+++ A++VFD P + VS+ ++I G+ QN EA+ ++ DM G+ P + T SV+
Sbjct: 320 KIDAAQKVFDNLPDRDVVSWNTLITGYMQNGLANEAIRIYNDMHNHEGLKPIQGTFVSVL 379
Query: 163 SSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIV 222
+ +LGG+ + +H L IK ++ V ++T L+++Y C LVEA LF+ M R+
Sbjct: 380 PAYSYLGGLQQGMRMHALSIKTGLNLDVYVTTCLIDLYAKCGKLVEAMFLFEHMPRRSTG 439
Query: 223 SWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDG 282
WN ++ G G ++AL+++ M +
Sbjct: 440 PWNAIIAGLGVHG-------------------------------HGAKALSLFSQMQQEE 468
Query: 283 IAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATI----IHFYAAC--- 335
I P+ V V L++AC H+ +V G +D +Q I + C
Sbjct: 469 IKPDHVTFVSLLAACS-----------HAGLVDQGRSFFDLMQTVYGIVPIAKHYTCMVD 517
Query: 336 --GRINLARLQFE----LGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRD 383
GR FE + IK A W AL+ +G +E + N+ + D
Sbjct: 518 MLGRAGQLDEAFEFIQSMPIKPDSAVWGALLGACRIHGNVEMGKVASQNLFELD 571
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 95/231 (41%), Gaps = 41/231 (17%)
Query: 26 LVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCS 85
VS L S + QG ++H+L K+GL + ++ LI+LYAKCG
Sbjct: 375 FVSVLPAYSYLGGLQQGMRMHALSIKTGLNLDVYVTTCLIDLYAKCG------------- 421
Query: 86 TLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRD 145
+L +A +F+ P + + ++I G + +AL +F
Sbjct: 422 ------------------KLVEAMFLFEHMPRRSTGPWNAIIAGLGVHGHGAKALSLFSQ 463
Query: 146 MRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIIS---TNLLNMYCV 202
M+ + P+ VT S++++ H G + + R L+ + G V I+ T +++M
Sbjct: 464 MQQEEIKPDHVTFVSLLAACSHAGLVDQGRSFFDLM--QTVYGIVPIAKHYTCMVDMLGR 521
Query: 203 CSSLVEARSLFDEMK-ERNIVSWNVMLNGFAKAGLVELAR----ELFERIP 248
L EA M + + W +L G VE+ + LFE P
Sbjct: 522 AGQLDEAFEFIQSMPIKPDSAVWGALLGACRIHGNVEMGKVASQNLFELDP 572
>gi|147795292|emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]
Length = 891
Score = 308 bits (790), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 199/652 (30%), Positives = 322/652 (49%), Gaps = 104/652 (15%)
Query: 22 YELALVSALR---YCSAHI-----AVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGL 73
Y+L LVS +R Y + + G++IH FK G + N F+ SLI++Y++ G
Sbjct: 206 YQLLLVSEIRPDFYTFPPVLKACGTLVDGRRIHCWAFKLGFQWNVFVAASLIHMYSRFGF 265
Query: 74 ISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQN 133
A+S+F D P + S+ +MI G QN
Sbjct: 266 TGIARSLF-------------------------------DDMPFRDMGSWNAMISGLIQN 294
Query: 134 DCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIIS 193
+AL+V +MR+ G+ N VT+ S++ LG I ++H VIK ++ + +S
Sbjct: 295 GNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVS 354
Query: 194 TNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVV 253
L+NMY AK G +E AR+ F+++ DVV
Sbjct: 355 NALINMY-------------------------------AKFGNLEDARKAFQQMFITDVV 383
Query: 254 SWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSII 313
SW ++I Y Q + A + M +G P+ + +V L S ++ +H I
Sbjct: 384 SWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFI 443
Query: 314 VKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDAR 373
++ G+ D + NA++ + + G+++ A
Sbjct: 444 MRRGWLMEDVVIG------------------------------NAVVDMYAKLGLLDSAH 473
Query: 374 QLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAG-VKPNEITMVSVFCAIASS 432
++F + +DV SW+ +I+GYAQN + A+E++ M + + PN+ T VS+ A A
Sbjct: 474 KVFEIILVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHV 533
Query: 433 GTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNA 492
G L++G H V+ ++ L+ ++ +ID+Y KCG + A +FY + ++ WNA
Sbjct: 534 GALQQGMRIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVT--WNA 591
Query: 493 IICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVY 552
II +HG A TLK++ ++ +K + +TF+ +LS C H+G V+ G+ F+ M+ Y
Sbjct: 592 IISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLMQE-Y 650
Query: 553 NVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERA 612
++P LKHYGCMVDLLGRAG LE A I+ MP++ D IWG LL A RIHGN+E+G+ A
Sbjct: 651 GIKPSLKHYGCMVDLLGRAGYLEMAYGFIKDMPLQPDASIWGALLGACRIHGNIELGKFA 710
Query: 613 AKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
+ L + + VLLSNIYA+ G+WE +R R+ G+K+ PG+S +
Sbjct: 711 SDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTI 762
Score = 175 bits (443), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 149/606 (24%), Positives = 261/606 (43%), Gaps = 111/606 (18%)
Query: 45 IHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDR 104
+H+L+ +G + FI L+NLYA G +S +
Sbjct: 138 LHALLVVAGKVQSIFISTRLVNLYANLGDVSLS--------------------------- 170
Query: 105 LNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVI-PNEVTLASVIS 163
R FD+ P K ++ SMI + N + EA+ F + ++ I P+ T V+
Sbjct: 171 ----RCTFDQIPQKDVYTWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLK 226
Query: 164 SSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVS 223
+ G + + R +H KL V ++ +L++MY ARSLFD+M R++ S
Sbjct: 227 AC---GTLVDGRRIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGS 283
Query: 224 WNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGI 283
WN M++G + G ++AL + M +GI
Sbjct: 284 WNAMISGLIQNG-------------------------------NAAQALDVLDEMRLEGI 312
Query: 284 APNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARL 343
N V +V ++ C + + IH ++K G + F+ +I+ YA G + AR
Sbjct: 313 KMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARK 372
Query: 344 QFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMA 403
F+ + SWN++IA Y QN+ P A
Sbjct: 373 AFQQMFITDVVSWNSIIA-------------------------------AYEQNDDPVTA 401
Query: 404 LELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLND-NLSAAIID 462
F M G +P+ +T+VS+ +A S K R H +++ + D + A++D
Sbjct: 402 HGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVD 461
Query: 463 MYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEK-RNIKLN 521
MYAK G +++A +VF I V WN +I G A +G A+ +++Y +E+ + I N
Sbjct: 462 MYAKLGLLDSAHKVFEII--LVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPN 519
Query: 522 SITFIGVLSTCCHAGLVDLGER-YFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEV 580
T++ +L H G + G R + + +K+ N+ D+ C++D+ G+ G+L DA +
Sbjct: 520 QGTWVSILPAYAHVGALQQGMRIHGRVIKT--NLHLDVFVATCLIDVYGKCGRLVDAMSL 577
Query: 581 IRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSL--AGLQPSHGPSRVLLS----NIY 634
+P ++ V W +++ IHG+ E + + G++P H LLS + +
Sbjct: 578 FYQVPQESSVT-WNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGF 636
Query: 635 ADAGRW 640
+ G+W
Sbjct: 637 VEEGKW 642
>gi|48716903|dbj|BAD23598.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 755
Score = 308 bits (789), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 189/618 (30%), Positives = 309/618 (50%), Gaps = 32/618 (5%)
Query: 54 LESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFD 113
LE N I + + G ++ A+ +F + N M++GY N RL A +F
Sbjct: 34 LEPEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFR 93
Query: 114 KTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWE 173
P SY +++ A + +A +F +M + + VT +ISS +
Sbjct: 94 AIPRPDNYSYNTLLHALAVSSSLADARGLFDEM----PVRDSVTYNVMISSHAN------ 143
Query: 174 CRMLHGLV------IKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVM 227
HGLV L + + +L Y + EAR LF+ E +++SWN +
Sbjct: 144 ----HGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVISWNAL 199
Query: 228 LNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPND 287
++G+ + G + ARELF+R+P +DVVSW M+ GY + + EA ++ D D
Sbjct: 200 MSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLF-----DAAPVRD 254
Query: 288 VMI-VDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFE 346
V ++S + E ++ + + ++ + A I ++ A+ F
Sbjct: 255 VFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRM----MDEAKELFN 310
Query: 347 LGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALEL 406
+ ++ASWN ++ G+ + GM+E+A+ +F+ M ++D SW+AM++ Y+Q L+L
Sbjct: 311 MMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQL 370
Query: 407 FHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAK 466
F M G N V A L+ G H ++ + + A++ MY K
Sbjct: 371 FIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFK 430
Query: 467 CGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFI 526
CG++ A F + +R V WN +I G A HG L+I+ + + K + IT +
Sbjct: 431 CGNMEDARNAFEEMEER--DVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLV 488
Query: 527 GVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPM 586
GVL+ C H+GLV+ G YF SM + V +HY CM+DLLGRAG+L +A ++++ MP
Sbjct: 489 GVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPF 548
Query: 587 KADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSI 646
+ D +WG LL ASRIH N E+G AA+ + L+P + VLLSNIYA +G+W DA +
Sbjct: 549 EPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKM 608
Query: 647 RKEMRDCGMKRLPGFSGV 664
R M + G+K++PGFS +
Sbjct: 609 RVMMEERGVKKVPGFSWI 626
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 129/495 (26%), Positives = 231/495 (46%), Gaps = 53/495 (10%)
Query: 49 IFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDA 108
+F++ + + N+L++ A ++ A+ +FD D V N+MIS + + ++ A
Sbjct: 91 LFRAIPRPDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISSHANHGLVSLA 150
Query: 109 REVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHL 168
R FD P K VS+ M+ + +N EA +F VI + +++S V
Sbjct: 151 RHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVI----SWNALMSGYVQW 206
Query: 169 GGIWECRMLHGLVIKLMIDGFVIISTNLL-NMYCVCSSLVEARSLFDEMKERNIVSWNVM 227
G + E R L + G ++S N++ + Y +VEAR LFD R++ +W +
Sbjct: 207 GKMSEARELFD-----RMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFTWTAV 261
Query: 228 LNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPND 287
++G+A+ G++E AR +F+ +P ++ VSW M+ Y+Q + EA ++ M C +A +
Sbjct: 262 VSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMMPCRNVASWN 321
Query: 288 VMIV---------------------DLISACGRAMAFGEG------LQIH-------SII 313
M+ D +S A+ +G LQ+ +
Sbjct: 322 TMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWV 381
Query: 314 VKAGFDCYDFIQATIIHFYAACGRINLARL-QFELGIKDHIASWNALIAGFIRNGMIEDA 372
++ F C A I CG RL + G+ + NAL+A + + G +EDA
Sbjct: 382 NRSAFACVLSTCADIAAL--ECGMQLHGRLIRAGYGVGCFVG--NALLAMYFKCGNMEDA 437
Query: 373 RQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASS 432
R F M++RDV SW+ MI+GYA++ ALE+F M KP++IT+V V A + S
Sbjct: 438 RNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHS 497
Query: 433 GTLKEGRWAHEYVLNN--SITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPW 490
G +++G ++ Y +++ +T +ID+ + G + A ++ + S W
Sbjct: 498 GLVEKG-ISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTM-W 555
Query: 491 NAIICGLAMHGDANL 505
A++ +H + L
Sbjct: 556 GALLGASRIHRNPEL 570
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 95/394 (24%), Positives = 172/394 (43%), Gaps = 67/394 (17%)
Query: 49 IFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDA 108
+F + E N N+++ Y + ++ +AK +F+ + + N M++GY + L +A
Sbjct: 277 VFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMMPCRNVASWNTMLTGYAQAGMLEEA 336
Query: 109 REVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHL 168
+ VFD P K VS+ +M+ ++Q C E L++F +M G N A V+S+ +
Sbjct: 337 KAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADI 396
Query: 169 GGIWECRM-LHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVM 227
+ EC M LHG +I+ + LL MY C ++ +AR+ F+EM+ER++VSWN M
Sbjct: 397 AAL-ECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTM 455
Query: 228 LNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPND 287
+ G+A+ G + EAL ++ M P+D
Sbjct: 456 IAGYARHGFGK-------------------------------EALEIFDMMRTTSTKPDD 484
Query: 288 VMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFEL 347
+ +V +++AC HS +V+ G I +FY+ + +
Sbjct: 485 ITLVGVLAACS-----------HSGLVEKG----------ISYFYS---------MHHDF 514
Query: 348 GIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ-KRDVYSWSAMISGYAQNEQPNMALEL 406
G+ + +I R G + +A L +M + D W A++ + P +
Sbjct: 515 GVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSA 574
Query: 407 FHGMVDAGVKPNEITMVSVFCAI-ASSGTLKEGR 439
+ + ++P M + I ASSG ++ R
Sbjct: 575 AEKIFE--LEPENAGMYVLLSNIYASSGKWRDAR 606
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 95/229 (41%), Gaps = 41/229 (17%)
Query: 25 ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSC 84
A L C+ A+ G Q+H + ++G F+ N+L+ +Y KCG + A++ F+
Sbjct: 385 AFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEM 444
Query: 85 STLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFR 144
D V+ N MI+GY R+ GF +EALE+F
Sbjct: 445 EERDVVSWNTMIAGYARH--------------------------GFG-----KEALEIFD 473
Query: 145 DMRILGVIPNEVTLASVISSSVHLG----GI-WECRMLHGLVIKLMIDGFVIISTNLLNM 199
MR P+++TL V+++ H G GI + M H + + + T ++++
Sbjct: 474 MMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHY----TCMIDL 529
Query: 200 YCVCSSLVEARSLFDEMK-ERNIVSWNVMLNGFAKAGLVELARELFERI 247
L EA L +M E + W +L EL R E+I
Sbjct: 530 LGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKI 578
>gi|357113878|ref|XP_003558728.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Brachypodium distachyon]
Length = 532
Score = 308 bits (789), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 182/504 (36%), Positives = 271/504 (53%), Gaps = 51/504 (10%)
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNG--FAKA----GLVELARELFERIPSKDVVSWG 256
C SL + + + M R +S L FA A G + A +F++IP D+ +
Sbjct: 18 CRSLRQIKQVHALMVLRGFLSDPSALRELLFASAVAVRGAIAHAYLVFDQIPRPDLFMYN 77
Query: 257 TMIDGYLQVERLSEALTMYRAML----CDGIAPNDVMIVDLISACGRAMAFGEGLQIHSI 312
T+I G +A+++Y M C G+ P+ + ++ AC A G G Q+H+
Sbjct: 78 TLIRGAAHTAAPRDAVSLYARMARRGSCGGVRPDKITFPFVLRACTAMGAGGTGAQVHAH 137
Query: 313 IVKAGFDCYDFIQATIIHFYAACGRINLARLQF--------------------------- 345
+VKAG + F++ +I +A+CG + +A F
Sbjct: 138 VVKAGCESDAFVRNALIGMHASCGELGVASALFDGRAREDAVAWSAMITGCARRGDIVAA 197
Query: 346 -----ELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQP 400
E +KDH+ SWN +I + + G + AR LFN + +RDV SW+AMISG+ +
Sbjct: 198 RKLFDECPVKDHV-SWNVMITAYAKRGEMAPARVLFNRIPERDVVSWNAMISGHVRCGSH 256
Query: 401 NMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAH----EYVLNNSITLNDNL 456
A+ELF M G KP+ +TM+S+ A A SG + GR H E L T+ L
Sbjct: 257 VYAMELFEQMQRMGQKPDVVTMLSLLSACADSGDIDVGRRLHSSLSEMFLRTGFTVI--L 314
Query: 457 SAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKR 516
A+IDMYAKCGS+ +A +VF+ +RD+ VS WN+II GLA+HG ++ ++ + K
Sbjct: 315 GNALIDMYAKCGSMKSALQVFWVMRDK--DVSTWNSIIGGLALHGHVLESIDVFKKMLKE 372
Query: 517 NIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLED 576
++ + ITF+ VL C H G+VD G YF M+ Y +EP++KHYGCMVD+LGRAG L++
Sbjct: 373 KVRPDEITFVAVLIACSHGGMVDKGREYFNLMQHHYRIEPNVKHYGCMVDMLGRAGLLKE 432
Query: 577 AEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYAD 636
A E I +M ++ + VIW TLL A R+HG +E+ E A + L + VLLSNIYA
Sbjct: 433 AFEFIDTMKVEPNSVIWRTLLGACRVHGEIELAEHANRQLLKARNDESGDYVLLSNIYAS 492
Query: 637 AGRWEDAFSIRKEMRDCGMKRLPG 660
AG W ++ +RK M D G+ + G
Sbjct: 493 AGEWSESEKMRKLMDDSGVNKQAG 516
Score = 126 bits (316), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 103/439 (23%), Positives = 184/439 (41%), Gaps = 80/439 (18%)
Query: 111 VFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDM----RILGVIPNEVTLASVISSSV 166
VFD+ P Y ++I G A R+A+ ++ M GV P+++T V+ +
Sbjct: 64 VFDQIPRPDLFMYNTLIRGAAHTAAPRDAVSLYARMARRGSCGGVRPDKITFPFVLRACT 123
Query: 167 HLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNV 226
+G +H V+K + + L+ M+ C L A +LFD + V+W+
Sbjct: 124 AMGAGGTGAQVHAHVVKAGCESDAFVRNALIGMHASCGELGVASALFDGRAREDAVAWSA 183
Query: 227 MLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQ----------VERLSE------ 270
M+ G A+ G + AR+LF+ P KD VSW MI Y + R+ E
Sbjct: 184 MITGCARRGDIVAARKLFDECPVKDHVSWNVMITAYAKRGEMAPARVLFNRIPERDVVSW 243
Query: 271 ---------------ALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHS---- 311
A+ ++ M G P+ V ++ L+SAC + G ++HS
Sbjct: 244 NAMISGHVRCGSHVYAMELFEQMQRMGQKPDVVTMLSLLSACADSGDIDVGRRLHSSLSE 303
Query: 312 IIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIED 371
+ ++ GF + +I YA CG + A F + +++WN++I G +G + +
Sbjct: 304 MFLRTGFTV--ILGNALIDMYAKCGSMKSALQVFWVMRDKDVSTWNSIIGGLALHGHVLE 361
Query: 372 ARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIAS 431
++++F M+ V+P+EIT V+V A +
Sbjct: 362 -------------------------------SIDVFKKMLKEKVRPDEITFVAVLIACSH 390
Query: 432 SGTLKEGRWAHEY--VLNNSITLNDNLS--AAIIDMYAKCGSINTAFEVFYHIRDRTTSV 487
G + +GR EY ++ + + N+ ++DM + G + AFE ++ SV
Sbjct: 391 GGMVDKGR---EYFNLMQHHYRIEPNVKHYGCMVDMLGRAGLLKEAFEFIDTMKVEPNSV 447
Query: 488 SPWNAIICGLAMHGDANLT 506
W ++ +HG+ L
Sbjct: 448 I-WRTLLGACRVHGEIELA 465
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 97/394 (24%), Positives = 176/394 (44%), Gaps = 84/394 (21%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGL---------------- 73
LR C+A A G Q+H+ + K+G ES+ F++N+LI ++A CG
Sbjct: 119 LRACTAMGAGGTGAQVHAHVVKAGCESDAFVRNALIGMHASCGELGVASALFDGRAREDA 178
Query: 74 ---------------ISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIK 118
I A+ +FD C D V+ N+MI+ Y + + AR +F++ P +
Sbjct: 179 VAWSAMITGCARRGDIVAARKLFDECPVKDHVSWNVMITAYAKRGEMAPARVLFNRIPER 238
Query: 119 CCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLH 178
VS+ +MI G + A+E+F M+ +G P+ VT+ S++S+ G I R LH
Sbjct: 239 DVVSWNAMISGHVRCGSHVYAMELFEQMQRMGQKPDVVTMLSLLSACADSGDIDVGRRLH 298
Query: 179 GLVIKLMI-DGFVIISTN-LLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGL 236
+ ++ + GF +I N L++MY C S+ A +F M+++++ +WN ++ G A G
Sbjct: 299 SSLSEMFLRTGFTVILGNALIDMYAKCGSMKSALQVFWVMRDKDVSTWNSIIGGLALHGH 358
Query: 237 VELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISA 296
V E++ +++ ML + + P+++ V ++ A
Sbjct: 359 V-------------------------------LESIDVFKKMLKEKVRPDEITFVAVLIA 387
Query: 297 CGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAAC-----GRINLARLQFE----L 347
C +G + +++ + I+ + H+ C GR L + FE +
Sbjct: 388 CSHGGMVDKGREYFNLMQH-----HYRIEPNVKHY--GCMVDMLGRAGLLKEAFEFIDTM 440
Query: 348 GIKDHIASWNALIAGFIRNGMIEDA----RQLFN 377
++ + W L+ +G IE A RQL
Sbjct: 441 KVEPNSVIWRTLLGACRVHGEIELAEHANRQLLK 474
>gi|297609253|ref|NP_001062888.2| Os09g0327200 [Oryza sativa Japonica Group]
gi|255678787|dbj|BAF24802.2| Os09g0327200 [Oryza sativa Japonica Group]
Length = 739
Score = 308 bits (789), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 189/618 (30%), Positives = 309/618 (50%), Gaps = 32/618 (5%)
Query: 54 LESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFD 113
LE N I + + G ++ A+ +F + N M++GY N RL A +F
Sbjct: 34 LEPEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFR 93
Query: 114 KTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWE 173
P SY +++ A + +A +F +M + + VT +ISS +
Sbjct: 94 AIPRPDNYSYNTLLHALAVSSSLADARGLFDEMPVR----DSVTYNVMISSHAN------ 143
Query: 174 CRMLHGLV------IKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVM 227
HGLV L + + +L Y + EAR LF+ E +++SWN +
Sbjct: 144 ----HGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVISWNAL 199
Query: 228 LNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPND 287
++G+ + G + ARELF+R+P +DVVSW M+ GY + + EA ++ D D
Sbjct: 200 MSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLF-----DAAPVRD 254
Query: 288 VMI-VDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFE 346
V ++S + E ++ + + ++ + A I ++ A+ F
Sbjct: 255 VFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRM----MDEAKELFN 310
Query: 347 LGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALEL 406
+ ++ASWN ++ G+ + GM+E+A+ +F+ M ++D SW+AM++ Y+Q L+L
Sbjct: 311 MMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQL 370
Query: 407 FHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAK 466
F M G N V A L+ G H ++ + + A++ MY K
Sbjct: 371 FIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFK 430
Query: 467 CGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFI 526
CG++ A F + +R V WN +I G A HG L+I+ + + K + IT +
Sbjct: 431 CGNMEDARNAFEEMEER--DVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLV 488
Query: 527 GVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPM 586
GVL+ C H+GLV+ G YF SM + V +HY CM+DLLGRAG+L +A ++++ MP
Sbjct: 489 GVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPF 548
Query: 587 KADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSI 646
+ D +WG LL ASRIH N E+G AA+ + L+P + VLLSNIYA +G+W DA +
Sbjct: 549 EPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKM 608
Query: 647 RKEMRDCGMKRLPGFSGV 664
R M + G+K++PGFS +
Sbjct: 609 RVMMEERGVKKVPGFSWI 626
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 129/495 (26%), Positives = 231/495 (46%), Gaps = 53/495 (10%)
Query: 49 IFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDA 108
+F++ + + N+L++ A ++ A+ +FD D V N+MIS + + ++ A
Sbjct: 91 LFRAIPRPDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISSHANHGLVSLA 150
Query: 109 REVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHL 168
R FD P K VS+ M+ + +N EA +F VI + +++S V
Sbjct: 151 RHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVI----SWNALMSGYVQW 206
Query: 169 GGIWECRMLHGLVIKLMIDGFVIISTNLL-NMYCVCSSLVEARSLFDEMKERNIVSWNVM 227
G + E R L + G ++S N++ + Y +VEAR LFD R++ +W +
Sbjct: 207 GKMSEARELFD-----RMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVFTWTAV 261
Query: 228 LNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPND 287
++G+A+ G++E AR +F+ +P ++ VSW M+ Y+Q + EA ++ M C +A +
Sbjct: 262 VSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMMPCRNVASWN 321
Query: 288 VMIV---------------------DLISACGRAMAFGEG------LQIH-------SII 313
M+ D +S A+ +G LQ+ +
Sbjct: 322 TMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWV 381
Query: 314 VKAGFDCYDFIQATIIHFYAACGRINLARL-QFELGIKDHIASWNALIAGFIRNGMIEDA 372
++ F C A I CG RL + G+ + NAL+A + + G +EDA
Sbjct: 382 NRSAFACVLSTCADIAAL--ECGMQLHGRLIRAGYGVGCFVG--NALLAMYFKCGNMEDA 437
Query: 373 RQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASS 432
R F M++RDV SW+ MI+GYA++ ALE+F M KP++IT+V V A + S
Sbjct: 438 RNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHS 497
Query: 433 GTLKEGRWAHEYVLNN--SITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPW 490
G +++G ++ Y +++ +T +ID+ + G + A ++ + S W
Sbjct: 498 GLVEKG-ISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTM-W 555
Query: 491 NAIICGLAMHGDANL 505
A++ +H + L
Sbjct: 556 GALLGASRIHRNPEL 570
Score = 125 bits (314), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 95/394 (24%), Positives = 172/394 (43%), Gaps = 67/394 (17%)
Query: 49 IFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDA 108
+F + E N N+++ Y + ++ +AK +F+ + + N M++GY + L +A
Sbjct: 277 VFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMMPCRNVASWNTMLTGYAQAGMLEEA 336
Query: 109 REVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHL 168
+ VFD P K VS+ +M+ ++Q C E L++F +M G N A V+S+ +
Sbjct: 337 KAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADI 396
Query: 169 GGIWECRM-LHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVM 227
+ EC M LHG +I+ + LL MY C ++ +AR+ F+EM+ER++VSWN M
Sbjct: 397 AAL-ECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTM 455
Query: 228 LNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPND 287
+ G+A+ G + EAL ++ M P+D
Sbjct: 456 IAGYARHGFGK-------------------------------EALEIFDMMRTTSTKPDD 484
Query: 288 VMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFEL 347
+ +V +++AC HS +V+ G I +FY+ + +
Sbjct: 485 ITLVGVLAACS-----------HSGLVEKG----------ISYFYS---------MHHDF 514
Query: 348 GIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ-KRDVYSWSAMISGYAQNEQPNMALEL 406
G+ + +I R G + +A L +M + D W A++ + P +
Sbjct: 515 GVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSA 574
Query: 407 FHGMVDAGVKPNEITMVSVFCAI-ASSGTLKEGR 439
+ + ++P M + I ASSG ++ R
Sbjct: 575 AEKIFE--LEPENAGMYVLLSNIYASSGKWRDAR 606
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 95/229 (41%), Gaps = 41/229 (17%)
Query: 25 ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSC 84
A L C+ A+ G Q+H + ++G F+ N+L+ +Y KCG + A++ F+
Sbjct: 385 AFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEM 444
Query: 85 STLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFR 144
D V+ N MI+GY R+ GF +EALE+F
Sbjct: 445 EERDVVSWNTMIAGYARH--------------------------GFG-----KEALEIFD 473
Query: 145 DMRILGVIPNEVTLASVISSSVHLG----GI-WECRMLHGLVIKLMIDGFVIISTNLLNM 199
MR P+++TL V+++ H G GI + M H + + + T ++++
Sbjct: 474 MMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHY----TCMIDL 529
Query: 200 YCVCSSLVEARSLFDEMK-ERNIVSWNVMLNGFAKAGLVELARELFERI 247
L EA L +M E + W +L EL R E+I
Sbjct: 530 LGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKI 578
>gi|125543632|gb|EAY89771.1| hypothetical protein OsI_11313 [Oryza sativa Indica Group]
Length = 798
Score = 308 bits (789), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 194/604 (32%), Positives = 303/604 (50%), Gaps = 49/604 (8%)
Query: 62 NSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCV 121
N+ I A+ G I A++ F++ + N +++GY RN + A +F + P +
Sbjct: 21 NARIAHLARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLA 80
Query: 122 SYTSMIMGFAQNDCWREAL-EVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGL 180
SY ++I G + R+ L + + + P+ V+ S++ V G + + L
Sbjct: 81 SYNALISGLSLR---RQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRL--- 134
Query: 181 VIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELA 240
+ M + + T LL + EAR LFDEM +R++V+W ML+G+ +AG + A
Sbjct: 135 -FQQMPERNHVSYTVLLGGLLDAGRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRITEA 193
Query: 241 RELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRA 300
R LF+ +P ++VVSW MI GY Q ++ A ++ M M+V I A G
Sbjct: 194 RALFDEMPKRNVVSWTAMISGYAQNGEVNLARKLFEVMPERNEVSWTAMLVGYIQA-GHV 252
Query: 301 MAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALI 360
D + A H AAC NA++
Sbjct: 253 E-----------------DAAELFNAMPEHPVAAC---------------------NAMM 274
Query: 361 AGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEI 420
GF + GM++ A+ +F M++RD +WSAMI Y QNE AL F M+ GV+PN
Sbjct: 275 VGFGQRGMVDAAKTVFEKMRERDDGTWSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYP 334
Query: 421 TMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHI 480
+++S+ A+ L GR H +L S ++ +A+I MY KCG+++ A VF+
Sbjct: 335 SVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTF 394
Query: 481 RDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDL 540
+ + WN++I G A HG L I+ D+ + + IT+IG L+ C + G V
Sbjct: 395 EPKDIVM--WNSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKE 452
Query: 541 GERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAAS 600
G F SM ++ P +HY CMVDLLGR+G +E+A ++I++MP++ D VIWG L+ A
Sbjct: 453 GREIFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGAC 512
Query: 601 RIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPG 660
R+H N E+ E AAK L L+P + VLLS+IY GRWEDA +RK + + + PG
Sbjct: 513 RMHRNAEIAEVAAKKLLELEPGNAGPYVLLSHIYTSVGRWEDASKMRKFISSRNLNKSPG 572
Query: 661 FSGV 664
S +
Sbjct: 573 CSWI 576
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 135/507 (26%), Positives = 244/507 (48%), Gaps = 45/507 (8%)
Query: 35 AHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNI 94
AH+A + + F++ T N+L+ Y + L A +F + D + N
Sbjct: 25 AHLARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLASYNA 84
Query: 95 MISGY-IRNDRLNDAREVFDKTPIK-CCVSYTSMIMGFAQNDCWREALEVFRDMRILGVI 152
+ISG +R L DA P VS+TS++ G+ ++ +A+ +F+ M
Sbjct: 85 LISGLSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQMPER--- 141
Query: 153 PNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSL 212
N V+ ++ + G + E R L M D V+ T +L+ YC + EAR+L
Sbjct: 142 -NHVSYTVLLGGLLDAGRVNEARRL----FDEMPDRDVVAWTAMLSGYCQAGRITEARAL 196
Query: 213 FDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEAL 272
FDEM +RN+VSW M++G+A+ G V LAR+LFE +P ++ VSW M+ GY+Q + +A
Sbjct: 197 FDEMPKRNVVSWTAMISGYAQNGEVNLARKLFEVMPERNEVSWTAMLVGYIQAGHVEDAA 256
Query: 273 TMYRAMLCDGIAPNDVMIVDL--ISACGRAMAFGEGLQ-----IHSIIVKAGFDCYDFIQ 325
++ AM +A + M+V A E ++ S ++KA ++ +F+
Sbjct: 257 ELFNAMPEHPVAACNAMMVGFGQRGMVDAAKTVFEKMRERDDGTWSAMIKA-YEQNEFLM 315
Query: 326 ATIIHFYAACGR---------INLARLQFELGIKDH----------------IASWNALI 360
+ F R I++ + L + D+ + + +ALI
Sbjct: 316 EALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALI 375
Query: 361 AGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEI 420
+I+ G ++ A+++F+ + +D+ W++MI+GYAQ+ AL +FH M AG+ P+ I
Sbjct: 376 TMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMSPDGI 435
Query: 421 TMVSVFCAIASSGTLKEGRWA-HEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYH 479
T + A + +G +KEGR + +N+SI + ++D+ + G + AF++ +
Sbjct: 436 TYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKN 495
Query: 480 IRDRTTSVSPWNAIICGLAMHGDANLT 506
+ +V W A++ MH +A +
Sbjct: 496 MPVEPDAVI-WGALMGACRMHRNAEIA 521
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 118/279 (42%), Gaps = 66/279 (23%)
Query: 25 ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSC 84
+++S L C+A + G+++H+ + + + + F ++LI +Y KCG + +AK +F +
Sbjct: 335 SVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTF 394
Query: 85 STLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFR 144
D V N MI+GY AQ+ +AL +F
Sbjct: 395 EPKDIVMWNSMITGY-------------------------------AQHGLGEQALGIFH 423
Query: 145 DMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCS 204
DMR+ G+ P+ +T +++ + G + E R + N V S
Sbjct: 424 DMRLAGMSPDGITYIGALTACSYTGKVKEGR-------------------EIFNSMTVNS 464
Query: 205 SLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIP-SKDVVSWGTMIDGYL 263
S+ ++ M++ ++GLVE A +L + +P D V WG ++ G
Sbjct: 465 SIRPGAE-----------HYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALM-GAC 512
Query: 264 QVERLSEALTMYRAMLCD---GIAPNDVMIVDLISACGR 299
++ R +E + L + G A V++ + ++ GR
Sbjct: 513 RMHRNAEIAEVAAKKLLELEPGNAGPYVLLSHIYTSVGR 551
>gi|225470997|ref|XP_002266598.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
gi|297742795|emb|CBI35475.3| unnamed protein product [Vitis vinifera]
Length = 517
Score = 308 bits (788), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 166/440 (37%), Positives = 248/440 (56%), Gaps = 5/440 (1%)
Query: 227 MLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPN 286
+LN + + G A+++F I + D+VSW +I YL + +A +++ + G+ P+
Sbjct: 43 LLNTYTQLGSPVDAQKVFNHIQNPDIVSWTCLISLYLHTSQPCKAFSIFSHLFHSGLRPD 102
Query: 287 DVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFE 346
+V +SACG G +H ++ + + +I Y+ G I +A F+
Sbjct: 103 SFCVVGAVSACGHRKDLSNGRIVHGMVFRFELGSDPIVGNALIDMYSRSGAIEVACSVFK 162
Query: 347 -LGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALE 405
+ IKD ++SW +L+ GFI+ IE AR++F+ M R+ SW+AMI+GY Q E P LE
Sbjct: 163 TMEIKD-VSSWTSLLNGFIKCNDIEAARRIFDEMPMRNSVSWTAMITGYVQGEVPIPGLE 221
Query: 406 LFHGMVDAGVK-PNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMY 464
LF M G P IT+V+V A G G H YV ++ L+ ++ A++DMY
Sbjct: 222 LFQEMRAEGKDWPTVITIVAVLSGCADIGAFDLGSSVHGYVNKTNLDLDVTVNNALMDMY 281
Query: 465 AKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSIT 524
AK G++ A ++F + R V W +I GLA+HG L+ +SD+ K + N +T
Sbjct: 282 AKSGALVLALKIFQEMPKR--DVFSWTTMISGLALHGKGTHALEAFSDMSKSGVVPNEVT 339
Query: 525 FIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSM 584
+ VLS C HAGLV G F+ M + ++P ++HYGCMVDLLGRAG L +A+E+I M
Sbjct: 340 LLSVLSACSHAGLVVEGRSLFQKMVQCHGIKPKIQHYGCMVDLLGRAGLLREAKELIEHM 399
Query: 585 PMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAF 644
P+K D VIW +LL+A +HGN+ + E A K + L+P +LL NIY A RWEDA
Sbjct: 400 PIKPDSVIWRSLLSACLVHGNLALAEMAGKMIIELEPDDDGVYILLWNIYCSASRWEDAL 459
Query: 645 SIRKEMRDCGMKRLPGFSGV 664
RK MRD +K+ PG S V
Sbjct: 460 KARKAMRDRRVKKKPGCSWV 479
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 116/460 (25%), Positives = 208/460 (45%), Gaps = 45/460 (9%)
Query: 67 LYAKCGLISQAKSMFDS-------CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKC 119
L KCG + + K + CS +AC ++ + Y + DA++VF+
Sbjct: 9 LLQKCGSLEKLKQIHGKAVTLGLLCSKRQHLACKLL-NTYTQLGSPVDAQKVFNHIQNPD 67
Query: 120 CVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHG 179
VS+T +I + +A +F + G+ P+ + +S+ H + R++HG
Sbjct: 68 IVSWTCLISLYLHTSQPCKAFSIFSHLFHSGLRPDSFCVVGAVSACGHRKDLSNGRIVHG 127
Query: 180 LVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVEL 239
+V + + I+ L++MY ++ A S+F M+ +++ SW +LNGF K +E
Sbjct: 128 MVFRFELGSDPIVGNALIDMYSRSGAIEVACSVFKTMEIKDVSSWTSLLNGFIKCNDIEA 187
Query: 240 ARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIA-PNDVMIVDLISACG 298
AR +F+ +P ++ VSW MI GY+Q E L +++ M +G P + IV ++S C
Sbjct: 188 ARRIFDEMPMRNSVSWTAMITGYVQGEVPIPGLELFQEMRAEGKDWPTVITIVAVLSGCA 247
Query: 299 RAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNA 358
AF G +H + K D + ++ YA G + LA F+ K + SW
Sbjct: 248 DIGAFDLGSSVHGYVNKTNLDLDVTVNNALMDMYAKSGALVLALKIFQEMPKRDVFSWTT 307
Query: 359 LIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPN 418
+I+G +G + ALE F M +GV PN
Sbjct: 308 MISGLALHG-------------------------------KGTHALEAFSDMSKSGVVPN 336
Query: 419 EITMVSVFCAIASSGTLKEGRWAHEYVLN-NSITLNDNLSAAIIDMYAKCGSINTAFEVF 477
E+T++SV A + +G + EGR + ++ + I ++D+ + G + A E+
Sbjct: 337 EVTLLSVLSACSHAGLVVEGRSLFQKMVQCHGIKPKIQHYGCMVDLLGRAGLLREAKELI 396
Query: 478 YHIRDRTTSVSPWNAIICGLAMHGD---ANLTLKIYSDLE 514
H+ + SV W +++ +HG+ A + K+ +LE
Sbjct: 397 EHMPIKPDSVI-WRSLLSACLVHGNLALAEMAGKMIIELE 435
Score = 139 bits (350), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 102/409 (24%), Positives = 192/409 (46%), Gaps = 69/409 (16%)
Query: 26 LVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCS 85
+V A+ C +S G+ +H ++F+ L S+ + N+LI++Y++ G I A S+F +
Sbjct: 106 VVGAVSACGHRKDLSNGRIVHGMVFRFELGSDPIVGNALIDMYSRSGAIEVACSVFKTME 165
Query: 86 TLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRD 145
D + +++G+I+ + + AR +FD+ P++ VS+T+MI G+ Q + LE+F++
Sbjct: 166 IKDVSSWTSLLNGFIKCNDIEAARRIFDEMPMRNSVSWTAMITGYVQGEVPIPGLELFQE 225
Query: 146 MRILGV-IPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCS 204
MR G P +T+ +V+S +G +HG V K +D V ++ L++MY
Sbjct: 226 MRAEGKDWPTVITIVAVLSGCADIGAFDLGSSVHGYVNKTNLDLDVTVNNALMDMYAKSG 285
Query: 205 SLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQ 264
+LV A +F EM +R++ SW M++G A G
Sbjct: 286 ALVLALKIFQEMPKRDVFSWTTMISGLALHG----------------------------- 316
Query: 265 VERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFI 324
+ + AL + M G+ PN+V ++ ++SAC A EG + +V+ C+
Sbjct: 317 --KGTHALEAFSDMSKSGVVPNEVTLLSVLSACSHAGLVVEGRSLFQKMVQ----CH--- 367
Query: 325 QATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ-KRD 383
GIK I + ++ R G++ +A++L +M K D
Sbjct: 368 -----------------------GIKPKIQHYGCMVDLLGRAGLLREAKELIEHMPIKPD 404
Query: 384 VYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNE----ITMVSVFCA 428
W +++S A N+AL G + ++P++ I + +++C+
Sbjct: 405 SVIWRSLLS--ACLVHGNLALAEMAGKMIIELEPDDDGVYILLWNIYCS 451
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 108/261 (41%), Gaps = 72/261 (27%)
Query: 9 VFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLY 68
+F +A ++ + +V+ L C+ A G +H + K+ L+ + + N+L+++Y
Sbjct: 222 LFQEMRAEGKDWPTVITIVAVLSGCADIGAFDLGSSVHGYVNKTNLDLDVTVNNALMDMY 281
Query: 69 AKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIM 128
AK G + A ++F + P + S+T+MI
Sbjct: 282 AKSGALVLA-------------------------------LKIFQEMPKRDVFSWTTMIS 310
Query: 129 GFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDG 188
G A + ALE F DM GV+PNEVTL SV+S+ H G +
Sbjct: 311 GLALHGKGTHALEAFSDMSKSGVVPNEVTLLSVLSACSHAGLV----------------- 353
Query: 189 FVIISTNLLNMYCVCSSLVEARSLFDEMKE-----RNIVSWNVMLNGFAKAGLVELAREL 243
VE RSLF +M + I + M++ +AGL+ A+EL
Sbjct: 354 ------------------VEGRSLFQKMVQCHGIKPKIQHYGCMVDLLGRAGLLREAKEL 395
Query: 244 FERIPSK-DVVSWGTMIDGYL 263
E +P K D V W +++ L
Sbjct: 396 IEHMPIKPDSVIWRSLLSACL 416
>gi|147791533|emb|CAN68456.1| hypothetical protein VITISV_025676 [Vitis vinifera]
Length = 768
Score = 308 bits (788), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 166/440 (37%), Positives = 247/440 (56%), Gaps = 5/440 (1%)
Query: 227 MLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPN 286
+LN + + G A+++F I + D+VSW +I YL + +A +++ + G+ P+
Sbjct: 294 LLNTYTQLGSPVDAQKVFNHIQNPDIVSWTCLISLYLHTSQPCKAFSIFSHLFHSGLRPD 353
Query: 287 DVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFE 346
+V +SACG G +H ++ + + +I Y+ G I +A F+
Sbjct: 354 SFCVVGAVSACGHRKDLSNGRIVHGMVFRFELGSDPIVGNALIDMYSRSGAIEVACSVFK 413
Query: 347 -LGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALE 405
+ IKD ++SW +L+ GFI+ IE AR++F+ M R+ SW+AMI+GY Q E P LE
Sbjct: 414 TMEIKD-VSSWTSLLNGFIKCNDIEAARRIFDEMPMRNSVSWTAMITGYVQGEVPIPGLE 472
Query: 406 LFHGMVDAGVK-PNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMY 464
LF M G P IT+V+V A G G H YV ++ L+ ++ A++DMY
Sbjct: 473 LFQEMRAEGKDWPTVITIVAVLSGCADIGAFDLGSSVHGYVNKTNLDLDVTVNNALMDMY 532
Query: 465 AKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSIT 524
AK G++ A ++F + R V W +I GLA+HG L+ +SD+ K N +T
Sbjct: 533 AKSGALVLALKIFQEMPKR--DVFSWTTMISGLALHGKGTHALEAFSDMSKSGXXPNEVT 590
Query: 525 FIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSM 584
+ VLS C HAGLV G F+ M + ++P ++HYGCMVDLLGRAG L +A+E+I M
Sbjct: 591 LLSVLSACSHAGLVVEGRSLFQKMVQCHGIKPKIQHYGCMVDLLGRAGLLREAKELIEHM 650
Query: 585 PMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAF 644
P+K D VIW +LL+A +HGN+ + E A K + L+P +LL NIY A RWEDA
Sbjct: 651 PIKPDSVIWRSLLSACLVHGNLALAEMAGKMIIELEPDDDGVYILLWNIYCSASRWEDAL 710
Query: 645 SIRKEMRDCGMKRLPGFSGV 664
RK MRD +K+ PG S V
Sbjct: 711 KARKAMRDRRVKKKPGCSWV 730
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 112/448 (25%), Positives = 201/448 (44%), Gaps = 42/448 (9%)
Query: 67 LYAKCGLISQAKSMFDS-------CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKC 119
L KCG + + K + CS +AC ++ + Y + DA++VF+
Sbjct: 260 LLQKCGSLEKLKQIHGKAVTLGLLCSKRQHLACKLL-NTYTQLGSPVDAQKVFNHIQNPD 318
Query: 120 CVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHG 179
VS+T +I + +A +F + G+ P+ + +S+ H + R++HG
Sbjct: 319 IVSWTCLISLYLHTSQPCKAFSIFSHLFHSGLRPDSFCVVGAVSACGHRKDLSNGRIVHG 378
Query: 180 LVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVEL 239
+V + + I+ L++MY ++ A S+F M+ +++ SW +LNGF K +E
Sbjct: 379 MVFRFELGSDPIVGNALIDMYSRSGAIEVACSVFKTMEIKDVSSWTSLLNGFIKCNDIEA 438
Query: 240 ARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIA-PNDVMIVDLISACG 298
AR +F+ +P ++ VSW MI GY+Q E L +++ M +G P + IV ++S C
Sbjct: 439 ARRIFDEMPMRNSVSWTAMITGYVQGEVPIPGLELFQEMRAEGKDWPTVITIVAVLSGCA 498
Query: 299 RAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNA 358
AF G +H + K D + ++ YA G + LA F+ K + SW
Sbjct: 499 DIGAFDLGSSVHGYVNKTNLDLDVTVNNALMDMYAKSGALVLALKIFQEMPKRDVFSWTT 558
Query: 359 LIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPN 418
+I+G +G + ALE F M +G PN
Sbjct: 559 MISGLALHG-------------------------------KGTHALEAFSDMSKSGXXPN 587
Query: 419 EITMVSVFCAIASSGTLKEGRWAHEYVLN-NSITLNDNLSAAIIDMYAKCGSINTAFEVF 477
E+T++SV A + +G + EGR + ++ + I ++D+ + G + A E+
Sbjct: 588 EVTLLSVLSACSHAGLVVEGRSLFQKMVQCHGIKPKIQHYGCMVDLLGRAGLLREAKELI 647
Query: 478 YHIRDRTTSVSPWNAIICGLAMHGDANL 505
H+ + SV W +++ +HG+ L
Sbjct: 648 EHMPIKPDSVI-WRSLLSACLVHGNLAL 674
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 102/409 (24%), Positives = 191/409 (46%), Gaps = 69/409 (16%)
Query: 26 LVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCS 85
+V A+ C +S G+ +H ++F+ L S+ + N+LI++Y++ G I A S+F +
Sbjct: 357 VVGAVSACGHRKDLSNGRIVHGMVFRFELGSDPIVGNALIDMYSRSGAIEVACSVFKTME 416
Query: 86 TLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRD 145
D + +++G+I+ + + AR +FD+ P++ VS+T+MI G+ Q + LE+F++
Sbjct: 417 IKDVSSWTSLLNGFIKCNDIEAARRIFDEMPMRNSVSWTAMITGYVQGEVPIPGLELFQE 476
Query: 146 MRILGV-IPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCS 204
MR G P +T+ +V+S +G +HG V K +D V ++ L++MY
Sbjct: 477 MRAEGKDWPTVITIVAVLSGCADIGAFDLGSSVHGYVNKTNLDLDVTVNNALMDMYAKSG 536
Query: 205 SLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQ 264
+LV A +F EM +R++ SW M++G A G
Sbjct: 537 ALVLALKIFQEMPKRDVFSWTTMISGLALHG----------------------------- 567
Query: 265 VERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFI 324
+ + AL + M G PN+V ++ ++SAC A EG + +V+ C+
Sbjct: 568 --KGTHALEAFSDMSKSGXXPNEVTLLSVLSACSHAGLVVEGRSLFQKMVQ----CH--- 618
Query: 325 QATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ-KRD 383
GIK I + ++ R G++ +A++L +M K D
Sbjct: 619 -----------------------GIKPKIQHYGCMVDLLGRAGLLREAKELIEHMPIKPD 655
Query: 384 VYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNE----ITMVSVFCA 428
W +++S A N+AL G + ++P++ I + +++C+
Sbjct: 656 SVIWRSLLS--ACLVHGNLALAEMAGKMIIELEPDDDGVYILLWNIYCS 702
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 106/261 (40%), Gaps = 72/261 (27%)
Query: 9 VFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLY 68
+F +A ++ + +V+ L C+ A G +H + K+ L+ + + N+L+++Y
Sbjct: 473 LFQEMRAEGKDWPTVITIVAVLSGCADIGAFDLGSSVHGYVNKTNLDLDVTVNNALMDMY 532
Query: 69 AKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIM 128
AK G + A ++F + P + S+T+MI
Sbjct: 533 AKSGALVLA-------------------------------LKIFQEMPKRDVFSWTTMIS 561
Query: 129 GFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDG 188
G A + ALE F DM G PNEVTL SV+S+ H G +
Sbjct: 562 GLALHGKGTHALEAFSDMSKSGXXPNEVTLLSVLSACSHAGLV----------------- 604
Query: 189 FVIISTNLLNMYCVCSSLVEARSLFDEMKE-----RNIVSWNVMLNGFAKAGLVELAREL 243
VE RSLF +M + I + M++ +AGL+ A+EL
Sbjct: 605 ------------------VEGRSLFQKMVQCHGIKPKIQHYGCMVDLLGRAGLLREAKEL 646
Query: 244 FERIPSK-DVVSWGTMIDGYL 263
E +P K D V W +++ L
Sbjct: 647 IEHMPIKPDSVIWRSLLSACL 667
>gi|334188487|ref|NP_200728.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170817|sp|Q9FIF7.1|PP435_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic; Flags: Precursor
gi|9759241|dbj|BAB09765.1| unnamed protein product [Arabidopsis thaliana]
gi|332009773|gb|AED97156.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 544
Score = 308 bits (788), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 156/429 (36%), Positives = 261/429 (60%), Gaps = 8/429 (1%)
Query: 237 VELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISA 296
V+ A ++F + + +V + MIDG++ R ++ +++Y M+ + + P++ +I ++ A
Sbjct: 77 VDYAYDVFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKA 136
Query: 297 CGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQF-ELGIKDHIAS 355
C + +IH+ ++K GF + ++ Y G + A+ F E+ +DH+A+
Sbjct: 137 CDLKVC----REIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAA 192
Query: 356 WNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGV 415
+I + G I++A +LF +++ +D W+AMI G +N++ N ALELF M V
Sbjct: 193 -TVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENV 251
Query: 416 KPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFE 475
NE T V V A + G L+ GRW H +V N + L++ + A+I+MY++CG IN A
Sbjct: 252 SANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARR 311
Query: 476 VFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHA 535
VF +RD+ V +N +I GLAMHG + + + D+ R + N +T + +L+ C H
Sbjct: 312 VFRVMRDK--DVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHG 369
Query: 536 GLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGT 595
GL+D+G F SMK V+NVEP ++HYGC+VDLLGR G+LE+A I ++P++ D ++ GT
Sbjct: 370 GLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGT 429
Query: 596 LLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGM 655
LL+A +IHGN+E+GE+ AK L + + VLLSN+YA +G+W+++ IR+ MRD G+
Sbjct: 430 LLSACKIHGNMELGEKIAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGI 489
Query: 656 KRLPGFSGV 664
++ PG S +
Sbjct: 490 EKEPGCSTI 498
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 137/563 (24%), Positives = 238/563 (42%), Gaps = 112/563 (19%)
Query: 25 ALVSALRYCS--AHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
L+S LR C AH+ IH+ I ++ + + F+ LI +
Sbjct: 31 TLISVLRSCKNIAHVP-----SIHAKIIRTFHDQDAFVVFELIRV--------------- 70
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
CSTLD V + Y+ N + YT+MI GF + + + +
Sbjct: 71 -CSTLDSVDYAYDVFSYVSNPNV---------------YLYTAMIDGFVSSGRSADGVSL 114
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
+ M V+P+ + SV+ + + CR +H V+KL + ++ +Y
Sbjct: 115 YHRMIHNSVLPDNYVITSVLKAC----DLKVCREIHAQVLKLGFGSSRSVGLKMMEIYGK 170
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
LV A+ +FDEM +R+ V+ VM+N +++ G ++ A ELF+ + KD V W MIDG
Sbjct: 171 SGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGL 230
Query: 263 LQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD 322
++ + +++AL ++R M + ++ N+ V ++SAC A G +HS + + +
Sbjct: 231 VRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSN 290
Query: 323 FIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKR 382
F+ +I+ Y+ CG IN AR F + + S+N +I+G +G
Sbjct: 291 FVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGA-------------- 336
Query: 383 DVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAH 442
S A NE F MV+ G +PN++T+V++ A + G L G
Sbjct: 337 ---------SVEAINE--------FRDMVNRGFRPNQVTLVALLNACSHGGLLDIG---- 375
Query: 443 EYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPW-NAIICGLAMHG 501
EVF ++ R +V P C + + G
Sbjct: 376 -------------------------------LEVFNSMK-RVFNVEPQIEHYGCIVDLLG 403
Query: 502 DANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHY 561
+ Y +E I+ + I +LS C G ++LGE+ K + N PD Y
Sbjct: 404 RVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKIAKRLFESEN--PDSGTY 461
Query: 562 GCMVDLLGRAGQLEDAEEVIRSM 584
+ +L +G+ +++ E+ SM
Sbjct: 462 VLLSNLYASSGKWKESTEIRESM 484
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 73/151 (48%), Gaps = 32/151 (21%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E V L CS A+ G+ +HS + +E + F+ N+LIN+Y++CG I++A+ +F
Sbjct: 255 EFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVF- 313
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
R + DK I SY +MI G A + EA+
Sbjct: 314 --------------------------RVMRDKDVI----SYNTMISGLAMHGASVEAINE 343
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWE 173
FRDM G PN+VTL +++++ H GG+ +
Sbjct: 344 FRDMVNRGFRPNQVTLVALLNACSH-GGLLD 373
>gi|449492842|ref|XP_004159118.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g05750, chloroplastic-like [Cucumis sativus]
Length = 525
Score = 308 bits (788), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 162/417 (38%), Positives = 248/417 (59%), Gaps = 7/417 (1%)
Query: 252 VVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACG--RAMAFGEGLQI 309
+V W + + Y + +LSEA + M G+ PN + + L+SAC + +F +
Sbjct: 57 IVLWTSSLARYCRNGQLSEAAAEFTRMRLAGVEPNHITFITLLSACADFPSESFFFASSL 116
Query: 310 HSIIVKAGFDC-YDFIQATIIHFYAACGRINLARLQF-ELGIKDHIASWNALIAGFIRNG 367
H K G D + + +I Y+ C ++ AR F LG+K+ + SWN ++ GF+RNG
Sbjct: 117 HGYACKYGLDTGHVMVGTALIDMYSKCAQLGHARKVFYNLGVKNSV-SWNTMLNGFMRNG 175
Query: 368 MIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFC 427
IE A QLF+ M RD SW+A+I+G ++ ALE FH M +GV + +++++V
Sbjct: 176 EIELAIQLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQRSGVAADYVSIIAVLA 235
Query: 428 AIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSV 487
A A G L G W H +V+ N +S ++IDMY++CG I A +VF + RT +
Sbjct: 236 ACADLGALTLGLWVHRFVMPQEFKDNIKISNSLIDMYSRCGCIEFARQVFVKMAKRT--L 293
Query: 488 SPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKS 547
WN+II G A++G A+ +L+ + ++K K + +++ G L+ C HAGLV+ G F +
Sbjct: 294 VSWNSIIVGFAVNGFADESLEFFXAMQKEGFKPDGVSYTGALTACSHAGLVNKGLELFDN 353
Query: 548 MKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVE 607
MKSV+ + P ++HYGC+VDL GRAG+LEDA +I MPMK + V+ G+LLAA R HG+V
Sbjct: 354 MKSVHKITPRIEHYGCIVDLYGRAGRLEDALNMIEEMPMKPNEVVLGSLLAACRTHGDVN 413
Query: 608 VGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
+ ER K L L P VLLSNIYA G+W+ A ++R+ M+ G+++ PG+S V
Sbjct: 414 LAERLMKHLFKLDPEGDAYYVLLSNIYAAIGKWDGANNVRRTMKARGVQKKPGYSSV 470
Score = 171 bits (434), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 123/478 (25%), Positives = 212/478 (44%), Gaps = 75/478 (15%)
Query: 112 FDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGG- 170
F+ + V +TS + + +N EA F MR+ GV PN +T +++S+
Sbjct: 49 FNPNSVDPIVLWTSSLARYCRNGQLSEAAAEFTRMRLAGVEPNHITFITLLSACADFPSE 108
Query: 171 -IWECRMLHGLVIKLMID-GFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVML 228
+ LHG K +D G V++ T L++MY C+ L AR +F + +N VSWN ML
Sbjct: 109 SFFFASSLHGYACKYGLDTGHVMVGTALIDMYSKCAQLGHARKVFYNLGVKNSVSWNTML 168
Query: 229 NGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDV 288
NGF + G +ELA +LF+ +P++D +SW +I+G L+ +AL + M G+A + V
Sbjct: 169 NGFMRNGEIELAIQLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQRSGVAADYV 228
Query: 289 MIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELG 348
I+ +++AC A GL +H ++ F I ++I Y+ CG I AR F
Sbjct: 229 SIIAVLAACADLGALTLGLWVHRFVMPQEFKDNIKISNSLIDMYSRCGCIEFARQVFVKM 288
Query: 349 IKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFH 408
K + SWN++I GF NG +++ + F MQK
Sbjct: 289 AKRTLVSWNSIIVGFAVNGFADESLEFFXAMQKE-------------------------- 322
Query: 409 GMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLN-NSITLNDNLSAAIIDMYAKC 467
G KP+ ++ A + +G + +G + + + + IT I+D+Y +
Sbjct: 323 -----GFKPDGVSYTGALTACSHAGLVNKGLELFDNMKSVHKITPRIEHYGCIVDLYGRA 377
Query: 468 GSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIG 527
G + A + +E+ +K N +
Sbjct: 378 GRLEDALNM------------------------------------IEEMPMKPNEVVLGS 401
Query: 528 VLSTCCHAGLVDLGERYFKSMKSVYNVEPDLK-HYGCMVDLLGRAGQLEDAEEVIRSM 584
+L+ C G V+L ER MK ++ ++P+ +Y + ++ G+ + A V R+M
Sbjct: 402 LLAACRTHGDVNLAERL---MKHLFKLDPEGDAYYVLLSNIYAAIGKWDGANNVRRTM 456
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 89/336 (26%), Positives = 162/336 (48%), Gaps = 49/336 (14%)
Query: 45 IHSLIFKSGLES-NTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRND 103
+H K GL++ + + +LI++Y+KC + A+ +F + + V+ N M++G++RN
Sbjct: 116 LHGYACKYGLDTGHVMVGTALIDMYSKCAQLGHARKVFYNLGVKNSVSWNTMLNGFMRNG 175
Query: 104 RLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVIS 163
+ A ++FD+ P + +S+T++I G ++ +ALE F M+ GV + V++ +V++
Sbjct: 176 EIELAIQLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQRSGVAADYVSIIAVLA 235
Query: 164 SSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVS 223
+ LG + +H V+ + IS +L++MY C + AR +F +M +R +VS
Sbjct: 236 ACADLGALTLGLWVHRFVMPQEFKDNIKISNSLIDMYSRCGCIEFARQVFVKMAKRTLVS 295
Query: 224 WNVMLNGFA-----------------------------------KAGLVELARELFERIP 248
WN ++ GFA AGLV ELF+ +
Sbjct: 296 WNSIIVGFAVNGFADESLEFFXAMQKEGFKPDGVSYTGALTACSHAGLVNKGLELFDNMK 355
Query: 249 SKDVVS-----WGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRA--M 301
S ++ +G ++D Y + RL +AL M M + PN+V++ L++AC +
Sbjct: 356 SVHKITPRIEHYGCIVDLYGRAGRLEDALNMIEEM---PMKPNEVVLGSLLAACRTHGDV 412
Query: 302 AFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGR 337
E L H + D Y + + I YAA G+
Sbjct: 413 NLAERLMKHLFKLDPEGDAYYVLLSNI---YAAIGK 445
>gi|225455746|ref|XP_002268440.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Vitis vinifera]
Length = 881
Score = 308 bits (788), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 194/649 (29%), Positives = 314/649 (48%), Gaps = 115/649 (17%)
Query: 25 ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSC 84
LV+ L C+ + +G +H L K GL + NSLI++Y+KC +S+A+ +FD
Sbjct: 206 TLVTVLPVCAGEEDIEKGMAVHGLAVKLGLNEELMVNNSLIDMYSKCRFLSEAQLLFD-- 263
Query: 85 STLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFR 144
+ND+ N VS+ SMI G+A+ + +V R
Sbjct: 264 ----------------KNDKKN-------------IVSWNSMIGGYAREE------DVCR 288
Query: 145 DMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCS 204
+L + E K+ D F I LN+ VC
Sbjct: 289 TFYLLQKMQTEDA-------------------------KMKADEFTI-----LNVLPVCL 318
Query: 205 SLVEARSLFDEMKERNIVSW-----------NVMLNGFAKAGLVELARELFERIPSKDVV 253
E +SL KE + SW N + + + G + + +F+ + +K V
Sbjct: 319 ERSELQSL----KELHGYSWRHGLQSNELVANAFIAAYTRCGALCSSERVFDLMDTKTVS 374
Query: 254 SWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSII 313
SW ++ GY Q +AL +Y M G+ P+ I L+ AC R + G +IH
Sbjct: 375 SWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFA 434
Query: 314 VKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDAR 373
++ G FI +++ Y CG+ A++
Sbjct: 435 LRNGLAVDPFIGISLLSLYICCGKPFAAQV------------------------------ 464
Query: 374 QLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSG 433
LF+ M+ R + SW+ MI+GY+QN P+ A+ LF M+ G++P EI ++ V A +
Sbjct: 465 -LFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLS 523
Query: 434 TLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAI 493
L+ G+ H + L +T + +S++IIDMYAK G I + +F +R++ V+ WN I
Sbjct: 524 ALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREK--DVASWNVI 581
Query: 494 ICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYN 553
I G +HG L+++ + + +K + TF G+L C HAGLV+ G YF M +++N
Sbjct: 582 IAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHN 641
Query: 554 VEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAA 613
+EP L+HY C+VD+LGRAG+++DA +I MP D IW +LL++ RIHGN+ +GE+ A
Sbjct: 642 IEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVA 701
Query: 614 KSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
L L+P + VL+SN++A +G+W+D +R M+D G+++ G S
Sbjct: 702 NKLLELEPEKPENYVLISNLFAGSGKWDDVRRVRGRMKDIGLQKDAGCS 750
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 138/621 (22%), Positives = 267/621 (42%), Gaps = 105/621 (16%)
Query: 8 SVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINL 67
S+F+ + ++ L ++ C+ + + GQ IH + K L S+ F+ N+LI +
Sbjct: 86 SIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAM 145
Query: 68 YAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMI 127
Y KCGL+ +A +F + P + VS+ S+I
Sbjct: 146 YGKCGLVEEAVKVF-------------------------------EHMPERNLVSWNSII 174
Query: 128 MGFAQNDCWREALEVFRDMRI--LGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLM 185
GF++N +E+ FR+M + +P+ TL +V+ I + +HGL +KL
Sbjct: 175 CGFSENGFLQESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEKGMAVHGLAVKLG 234
Query: 186 IDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFE 245
++ ++++ +L++MY C L EA+ LFD+ ++NIVSWN M+ G+A+ V L +
Sbjct: 235 LNEELMVNNSLIDMYSKCRFLSEAQLLFDKNDKKNIVSWNSMIGGYAREEDVCRTFYLLQ 294
Query: 246 RIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGE 305
++ ++D + ++ I++++ C
Sbjct: 295 KMQTEDA-----------------------------KMKADEFTILNVLPVCLERSELQS 325
Query: 306 GLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIR 365
++H + G + + I Y CG + + F+L ++SWNAL+
Sbjct: 326 LKELHGYSWRHGLQSNELVANAFIAAYTRCGALCSSERVFDLMDTKTVSSWNALLC---- 381
Query: 366 NGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSV 425
GYAQN P AL+L+ M D+G+ P+ T+ S+
Sbjct: 382 ---------------------------GYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSL 414
Query: 426 FCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTT 485
A + +L G H + L N + ++ + +++ +Y CG A +F + R
Sbjct: 415 LLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHR-- 472
Query: 486 SVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLG-ERY 544
S+ WN +I G + +G + + ++ + I+ I + V C + LG E +
Sbjct: 473 SLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELH 532
Query: 545 FKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHG 604
++K+ ++ D+ ++D+ + G + ++ + + K DV W ++A IHG
Sbjct: 533 CFALKA--HLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREK-DVASWNVIIAGYGIHG 589
Query: 605 N----VEVGERAAKSLAGLQP 621
+E+ E+ + GL+P
Sbjct: 590 RGKEALELFEKMLR--LGLKP 608
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/348 (22%), Positives = 152/348 (43%), Gaps = 71/348 (20%)
Query: 191 IISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSK 250
+++T ++ MY +C S ++R +FD+++ +N+ WN +++ + + L E A +F + S
Sbjct: 35 VLNTRIITMYSMCGSPSDSRMVFDKLRRKNLFQWNAIVSAYTRNELFEDAMSIFSELIS- 93
Query: 251 DVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIH 310
+T ++ P++ + +I AC + G G IH
Sbjct: 94 ---------------------VTEHK--------PDNFTLPCVIKACAGLLDLGLGQIIH 124
Query: 311 SIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIE 370
+ K F+ +I Y CG + A FE + ++ SWN++I GF NG ++
Sbjct: 125 GMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIICGFSENGFLQ 184
Query: 371 DARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIA 430
++ FN ++ M+ G + P+ T+V+V A
Sbjct: 185 ES---FN--------AFREMLVG------------------EESFVPDVATLVTVLPVCA 215
Query: 431 SSGTLKEGRWAH----EYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTS 486
+++G H + LN + +N++L IDMY+KC ++ A ++ + D+
Sbjct: 216 GEEDIEKGMAVHGLAVKLGLNEELMVNNSL----IDMYSKCRFLSEA-QLLFDKNDKKNI 270
Query: 487 VSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKL--NSITFIGVLSTC 532
VS WN++I G A D T + ++ + K+ + T + VL C
Sbjct: 271 VS-WNSMIGGYAREEDVCRTFYLLQKMQTEDAKMKADEFTILNVLPVC 317
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 108/243 (44%), Gaps = 35/243 (14%)
Query: 293 LISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQAT-IIHFYAACGRINLARLQFELGIKD 351
L+ ACG+ G ++H ++ + C DF+ T II Y+ CG + +R+ F+ +
Sbjct: 4 LLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRK 63
Query: 352 HIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMV 411
++ WNA+++ + RN + EDA +F S +IS
Sbjct: 64 NLFQWNAIVSAYTRNELFEDAMSIF-----------SELISVTEH--------------- 97
Query: 412 DAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSIN 471
KP+ T+ V A A L G+ H + + + A+I MY KCG +
Sbjct: 98 ----KPDNFTLPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVE 153
Query: 472 TAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDL--EKRNIKLNSITFIGVL 529
A +VF H+ +R ++ WN+IICG + +G + + ++ + + + T + VL
Sbjct: 154 EAVKVFEHMPER--NLVSWNSIICGFSENGFLQESFNAFREMLVGEESFVPDVATLVTVL 211
Query: 530 STC 532
C
Sbjct: 212 PVC 214
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 68/131 (51%), Gaps = 8/131 (6%)
Query: 22 YELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMF 81
YE+A++ CS A+ G+++H K+ L + F+ +S+I++YAK G I ++ +F
Sbjct: 508 YEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIF 567
Query: 82 DSCSTLDPVACNIMISGYIRNDRLNDAREVFDK------TPIKCCVSYTSMIMGFAQNDC 135
D D + N++I+GY + R +A E+F+K P ++T ++M +
Sbjct: 568 DRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDD--FTFTGILMACSHAGL 625
Query: 136 WREALEVFRDM 146
+ LE F M
Sbjct: 626 VEDGLEYFNQM 636
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 97/208 (46%), Gaps = 8/208 (3%)
Query: 438 GRWAHEYVLNNSITLNDN-LSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICG 496
GR HE V ++ ND L+ II MY+ CGS + + VF +R + ++ WNAI+
Sbjct: 17 GRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRK--NLFQWNAIVSA 74
Query: 497 LAMHGDANLTLKIYSDL-EKRNIKLNSITFIGVLSTCCHAGLVDLG-ERYFKSMKSVYNV 554
+ + I+S+L K ++ T V+ C AGL+DLG + M + ++
Sbjct: 75 YTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKAC--AGLLDLGLGQIIHGMATKMDL 132
Query: 555 EPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAK 614
D+ ++ + G+ G +E+A +V MP + ++V W +++ +G ++ A +
Sbjct: 133 VSDVFVGNALIAMYGKCGLVEEAVKVFEHMPER-NLVSWNSIICGFSENGFLQESFNAFR 191
Query: 615 SLAGLQPSHGPSRVLLSNIYADAGRWED 642
+ + S P L + ED
Sbjct: 192 EMLVGEESFVPDVATLVTVLPVCAGEED 219
>gi|297738895|emb|CBI28140.3| unnamed protein product [Vitis vinifera]
Length = 580
Score = 308 bits (788), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 159/432 (36%), Positives = 255/432 (59%), Gaps = 6/432 (1%)
Query: 234 AGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDL 293
+G + AR +F +IP+ + ++I GY +A+ Y+ M+ G+ P+ L
Sbjct: 25 SGSLPYARLVFNQIPNPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSL 84
Query: 294 ISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHI 353
+CG EG Q+H K GF +IQ T+++ Y+ CG + AR F+ + +
Sbjct: 85 FKSCG---VLCEGKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSV 141
Query: 354 ASWNALIAGFIRNGMIEDARQLFNNMQ-KRDVYSWSAMISGYAQNEQPNMALELFHGMVD 412
SW +I + + + +A +LF M+ +++ W+ MI+G+ ++ AL LF+ M
Sbjct: 142 VSWATMIGAYAQWDLPHEAIKLFRRMEIASNLFCWNIMINGHVEDSDYEEALSLFNEMQL 201
Query: 413 AGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINT 472
+GVK +++TM S+ A G L+ G+W H Y+ I ++ L A++DMYAKCGSI +
Sbjct: 202 SGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIES 261
Query: 473 AFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTC 532
A VF + ++ V W A+I GLAM G L+++ +++ +K ++ITF+GVL+ C
Sbjct: 262 AMRVFQEMPEK--DVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAAC 319
Query: 533 CHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVI 592
HAGLV+ G YF SM + Y ++P ++HYGCMVD+LGRAG++ +AE++I++MPM D +
Sbjct: 320 SHAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYFV 379
Query: 593 WGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRD 652
LL+A RIHGN+ V ERAA+ L L P +G + VLLSNIY+ WE A +R+ M +
Sbjct: 380 LVGLLSACRIHGNLVVAERAAQQLIELDPKNGGTYVLLSNIYSSMKNWEAAKKMRELMVE 439
Query: 653 CGMKRLPGFSGV 664
+K+ PG S +
Sbjct: 440 RNIKKPPGCSAI 451
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 105/399 (26%), Positives = 178/399 (44%), Gaps = 40/399 (10%)
Query: 80 MFDSCSTLDPVACNIMISGYIRNDR--LNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWR 137
M +C +DP + + +++ +D L AR VF++ P + S+I G+ + R
Sbjct: 1 MLRTCLFVDPFSASKIVAFCALHDSGSLPYARLVFNQIPNPTTFTCNSIIRGYTNKNLPR 60
Query: 138 EALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLL 197
+A+ ++ M + G+ P+ T S+ S G + E + LH KL I L+
Sbjct: 61 QAILFYQLMMLQGLDPDRFTFPSLFKSC---GVLCEGKQLHCHSTKLGFASDAYIQNTLM 117
Query: 198 NMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIP-SKDVVSWG 256
NMY C LV AR +FD+M +++VSW M+ +A+ L A +LF R+ + ++ W
Sbjct: 118 NMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYAQWDLPHEAIKLFRRMEIASNLFCWN 177
Query: 257 TMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKA 316
MI+G+++ EAL+++ M G+ + V + L+ AC A G +H I K
Sbjct: 178 IMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKE 237
Query: 317 GFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLF 376
+ + ++ YA CG I A F+ + + +W ALI G G A +LF
Sbjct: 238 KIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELF 297
Query: 377 NNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLK 436
+ MQ + VKP+ IT V V A + +G +
Sbjct: 298 HEMQMSE-------------------------------VKPDAITFVGVLAACSHAGLVN 326
Query: 437 EGRWAHEYVLNNSITLNDNLS--AAIIDMYAKCGSINTA 473
EG A+ + N + ++ ++DM + G I A
Sbjct: 327 EG-IAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEA 364
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 146/298 (48%), Gaps = 44/298 (14%)
Query: 41 QGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYI 100
+G+Q+H K G S+ +IQN+L+N+Y+ CG + A+ +FD V+ MI Y
Sbjct: 93 EGKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAYA 152
Query: 101 RNDRLNDAREVFDKTPIKC-CVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLA 159
+ D ++A ++F + I + MI G ++ + EAL +F +M++ GV ++VT+A
Sbjct: 153 QWDLPHEAIKLFRRMEIASNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMA 212
Query: 160 SVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKER 219
S++ + HLG + + LH + K I+ V + T L++MY C S+ A +F EM E+
Sbjct: 213 SLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEK 272
Query: 220 NIVSWNVMLNGFA-----------------------------------KAGLVELARELF 244
++++W ++ G A AGLV F
Sbjct: 273 DVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHAGLVNEGIAYF 332
Query: 245 ERIPSK-----DVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISAC 297
+P+K + +G M+D + R++EA + + M +AP+ ++V L+SAC
Sbjct: 333 NSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNM---PMAPDYFVLVGLLSAC 387
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 76/166 (45%), Gaps = 32/166 (19%)
Query: 8 SVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINL 67
S+FN + + D ++ + S L C+ A+ G+ +H I K +E + + +L+++
Sbjct: 194 SLFNEMQLSGVKGD-KVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDM 252
Query: 68 YAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMI 127
YAKCG I A VF + P K +++T++I
Sbjct: 253 YAKCGSIES-------------------------------AMRVFQEMPEKDVMTWTALI 281
Query: 128 MGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWE 173
+G A +ALE+F +M++ V P+ +T V+++ H G + E
Sbjct: 282 VGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHAGLVNE 327
>gi|345505204|gb|AEN99826.1| chlororespiratory reduction 4, partial [Aethionema cordifolium]
Length = 587
Score = 308 bits (788), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 183/519 (35%), Positives = 286/519 (55%), Gaps = 45/519 (8%)
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
GV ++ +L+ V+ + LG + E +HG + K I + + L+ +Y C L A
Sbjct: 94 GVSVDKFSLSLVLKACSRLGFVQEGMQIHGFLRKTGIWSDLFLQNCLIGLYLKCGCLGFA 153
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPS--KDVVSWGTMIDGYLQVER 267
R +FD M +R+ VS+N M++G+ K GL+ ARELF+ +P K+++SW +MI GY Q
Sbjct: 154 RQIFDRMPQRDSVSYNSMIDGYVKCGLIGSARELFDLMPKEMKNLISWNSMISGYAQT-- 211
Query: 268 LSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQAT 327
S+ + + + + P DLIS +
Sbjct: 212 -SDGVNIASKLFAE--MPEK----DLIS-----------------------------WNS 235
Query: 328 IIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSW 387
+I Y GR+ A+ F + + + +W +I G+ + G + A+ LF+ M RDV ++
Sbjct: 236 LIDGYVKHGRMEDAKDLFYVMPRRDVVTWATMIDGYAKLGFVHKAKTLFDQMPHRDVVAY 295
Query: 388 SAMISGYAQNEQPNMALELFHGM-VDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVL 446
++M++GY QN+ ALE+F+ M D+ + P+E T+V V AIA G L + ++Y++
Sbjct: 296 NSMMAGYVQNKYHMEALEIFNNMEKDSHLSPDETTLVIVLSAIAQLGRLSKAMSMNKYIV 355
Query: 447 NNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLT 506
S L L A+IDM++KCGSI A VF I+++ S+ WNA+I GLA+HG L
Sbjct: 356 EKSFPLGGKLGVALIDMHSKCGSIQQAISVFEGIKNK--SIDHWNAMIGGLAIHGHGELA 413
Query: 507 LKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVD 566
+ +E+ +IK + ITFIGVL+ C H+GLV G F+ M+ + +EP L+HYGC+VD
Sbjct: 414 FDMLMQIERCSIKPDDITFIGVLNACSHSGLVKEGLLSFELMRRKHKIEPRLQHYGCIVD 473
Query: 567 LLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPS 626
+L R+G +E A+ +I MPM+ + VIW T L A R E+GE AK L LQ + PS
Sbjct: 474 ILSRSGSIELAKHLIEDMPMEPNDVIWRTFLIACRNRKEFEIGELVAKHLI-LQAGYNPS 532
Query: 627 R-VLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
VLLSN+YA G W+D +R M+ + ++PG S +
Sbjct: 533 SYVLLSNMYASLGMWKDVRRVRMMMKQRKLHKIPGCSWI 571
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 129/457 (28%), Positives = 218/457 (47%), Gaps = 77/457 (16%)
Query: 22 YELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMF 81
+ L+LV L+ CS V +G QIH + K+G+ S+ F+QN LI LY KCG + A+ +F
Sbjct: 100 FSLSLV--LKACSRLGFVQEGMQIHGFLRKTGIWSDLFLQNCLIGLYLKCGCLGFARQIF 157
Query: 82 DSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTP--IKCCVSYTSMIMGFAQNDCWREA 139
D D V+ N MI GY++ + ARE+FD P +K +S+ SMI G+AQ
Sbjct: 158 DRMPQRDSVSYNSMIDGYVKCGLIGSARELFDLMPKEMKNLISWNSMISGYAQTS----- 212
Query: 140 LEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNM 199
+ V +AS + + M + +I +L++
Sbjct: 213 --------------DGVNIASKLFAE-------------------MPEKDLISWNSLIDG 239
Query: 200 YCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMI 259
Y + +A+ LF M R++V+W M++G+AK G V A+ LF+++P +DVV++ +M+
Sbjct: 240 YVKHGRMEDAKDLFYVMPRRDVVTWATMIDGYAKLGFVHKAKTLFDQMPHRDVVAYNSMM 299
Query: 260 DGYLQVERLSEALTMYRAMLCDG-IAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGF 318
GY+Q + EAL ++ M D ++P++ +V ++SA + + + ++ IV+ F
Sbjct: 300 AGYVQNKYHMEALEIFNNMEKDSHLSPDETTLVIVLSAIAQLGRLSKAMSMNKYIVEKSF 359
Query: 319 DCYDFIQATIIHFYAACGRINLARLQFELGIKDH-IASWNALIAGFIRNGMIEDARQLFN 377
+ +I ++ CG I A FE GIK+ I WNA+I G +G E
Sbjct: 360 PLGGKLGVALIDMHSKCGSIQQAISVFE-GIKNKSIDHWNAMIGGLAIHGHGE------- 411
Query: 378 NMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKE 437
+A ++ + +KP++IT + V A + SG +KE
Sbjct: 412 ------------------------LAFDMLMQIERCSIKPDDITFIGVLNACSHSGLVKE 447
Query: 438 GRWAHEYV-LNNSITLNDNLSAAIIDMYAKCGSINTA 473
G + E + + I I+D+ ++ GSI A
Sbjct: 448 GLLSFELMRRKHKIEPRLQHYGCIVDILSRSGSIELA 484
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 106/392 (27%), Positives = 186/392 (47%), Gaps = 36/392 (9%)
Query: 236 LVELARELFERIPS--------KDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPND 287
L E AR +F+ S +D W +I + AL + ML +G++ +
Sbjct: 40 LAEFARCVFQNYHSCSFAHGEVEDPFLWNAVIKSHSHGVDPKRALIWFCLMLENGVSVDK 99
Query: 288 VMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFEL 347
+ ++ AC R EG+QIH + K G F+Q +I Y CG + AR F+
Sbjct: 100 FSLSLVLKACSRLGFVQEGMQIHGFLRKTGIWSDLFLQNCLIGLYLKCGCLGFARQIFDR 159
Query: 348 GIKDHIASWNALIAGFIRNGMIEDARQLFNNMQK--RDVYSWSAMISGYAQ-NEQPNMAL 404
+ S+N++I G+++ G+I AR+LF+ M K +++ SW++MISGYAQ ++ N+A
Sbjct: 160 MPQRDSVSYNSMIDGYVKCGLIGSARELFDLMPKEMKNLISWNSMISGYAQTSDGVNIAS 219
Query: 405 ELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLS-AAIIDM 463
+LF M + + I+ S+ G +K GR L + D ++ A +ID
Sbjct: 220 KLFAEMPEKDL----ISWNSLI-----DGYVKHGRMEDAKDLFYVMPRRDVVTWATMIDG 270
Query: 464 YAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEK-RNIKLNS 522
YAK G ++ A +F + R V +N+++ G + L+I++++EK ++ +
Sbjct: 271 YAKLGFVHKAKTLFDQMPHR--DVVAYNSMMAGYVQNKYHMEALEIFNNMEKDSHLSPDE 328
Query: 523 ITFIGVLSTCCHAGLVDLGERYFKSMK-SVYNVEPDLKHYG----CMVDLLGRAGQLEDA 577
T + VLS G R K+M + Y VE G ++D+ + G ++ A
Sbjct: 329 TTLVIVLSAIAQLG------RLSKAMSMNKYIVEKSFPLGGKLGVALIDMHSKCGSIQQA 382
Query: 578 EEVIRSMPMKADVVIWGTLLAASRIHGNVEVG 609
V + K+ + W ++ IHG+ E+
Sbjct: 383 ISVFEGIKNKS-IDHWNAMIGGLAIHGHGELA 413
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 135/291 (46%), Gaps = 31/291 (10%)
Query: 308 QIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNG 367
QIH+ ++K GF + I+ +AA R LA + H S+ +G
Sbjct: 8 QIHARLIKTGFIQNSNLTTRIVLAFAASRRPYLAEFARCVFQNYHSCSFA--------HG 59
Query: 368 MIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFC 427
+ED + W+A+I ++ P AL F M++ GV ++ ++ V
Sbjct: 60 EVEDP------------FLWNAVIKSHSHGVDPKRALIWFCLMLENGVSVDKFSLSLVLK 107
Query: 428 AIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSV 487
A + G ++EG H ++ I + L +I +Y KCG + A ++F + R SV
Sbjct: 108 ACSRLGFVQEGMQIHGFLRKTGIWSDLFLQNCLIGLYLKCGCLGFARQIFDRMPQR-DSV 166
Query: 488 SPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCH-AGLVDLGERYFK 546
S +N++I G G +++ DL + +K N I++ ++S + V++ + F
Sbjct: 167 S-YNSMIDGYVKCGLIGSARELF-DLMPKEMK-NLISWNSMISGYAQTSDGVNIASKLFA 223
Query: 547 SMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLL 597
M E DL + ++D + G++EDA+++ MP + DVV W T++
Sbjct: 224 EMP-----EKDLISWNSLIDGYVKHGRMEDAKDLFYVMP-RRDVVTWATMI 268
>gi|147816454|emb|CAN77435.1| hypothetical protein VITISV_017817 [Vitis vinifera]
Length = 601
Score = 308 bits (788), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 189/608 (31%), Positives = 299/608 (49%), Gaps = 68/608 (11%)
Query: 60 IQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRN--DRLNDAREVFDKTPI 117
+++S++ + KCG K T +S +R+ L +FD+
Sbjct: 7 LRHSILCCFHKCGTFDHLKQTTSILITSGLAHHTFFLSDILRSATKDLGYTLLLFDRLAT 66
Query: 118 KCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRML 177
+ ++I GF+ + + L + +R GVIP+ T
Sbjct: 67 PYIFLWNTIIRGFSASSQPQMVLVAYSRLRNHGVIPDRHTFP------------------ 108
Query: 178 HGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLV 237
L++ F + N + + +V+ FD + ++VS FA G V
Sbjct: 109 ------LLLKAFSKLRNE--NPFQFYAHIVKFGLDFDAFVQNSLVS------AFAHCGYV 154
Query: 238 ELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISAC 297
+ +R LF KDVVSW +I+G L+ R EAL + M G+ ++V IV ++ A
Sbjct: 155 DCSRRLFIETAKKDVVSWTALINGCLRNGRAVEALECFVEMRSSGVEVDEVTIVSVLCAA 214
Query: 298 GRAMAFGEGLQIHSIIVKAGFDCYD-FIQATIIHFYAACGRINLARLQFELGIKDHIASW 356
G +H V++G +D ++ + ++ Y+ CG
Sbjct: 215 AMLRDVWFGRWVHGFYVESGRVIWDVYVGSALVDMYSKCG-------------------- 254
Query: 357 NALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVK 416
+DA ++FN M R++ SW A+I+GY Q + AL++F M+ G++
Sbjct: 255 -----------YCDDAVKVFNEMPTRNLVSWGALIAGYVQCNRYKEALKVFQEMIIEGIE 303
Query: 417 PNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEV 476
PN+ T+ S A A G+L +GRW HEYV + + LN L A++DMY+KCG ++ A V
Sbjct: 304 PNQSTVTSALTACAQLGSLDQGRWLHEYVDRSKLGLNSKLGTALVDMYSKCGCVDEALLV 363
Query: 477 FYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAG 536
F + + V PW A+I GLAM GDA +L ++S + + ++ N +TF+GVLS C H G
Sbjct: 364 FEKLPAK--DVYPWTAMINGLAMRGDALSSLNLFSQMIRSRVQPNGVTFLGVLSACAHGG 421
Query: 537 LVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTL 596
LVD G F+ M Y +EP++ HYGCMVDLLGRAG+LE+A + I SMPM+ +WG L
Sbjct: 422 LVDEGLELFRLMICDYRLEPNVDHYGCMVDLLGRAGRLEEAIKFIESMPMEPTPGVWGAL 481
Query: 597 LAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMK 656
+ IH E+GE L LQP H +LL+N+Y+ +WE A ++R+ M+ G+
Sbjct: 482 FSGCMIHKAFELGEHIGNHLIKLQPHHSGRYILLANLYSRCQKWEAAANVRRLMKGKGVD 541
Query: 657 RLPGFSGV 664
+ PG S +
Sbjct: 542 KSPGCSWI 549
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 114/461 (24%), Positives = 195/461 (42%), Gaps = 100/461 (21%)
Query: 44 QIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRND 103
Q ++ I K GL+ + F+QNSL++ +A CG + CS
Sbjct: 124 QFYAHIVKFGLDFDAFVQNSLVSAFAHCGYVD--------CS------------------ 157
Query: 104 RLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVIS 163
R +F +T K VS+T++I G +N EALE F +MR GV +EVT+ SV+
Sbjct: 158 -----RRLFIETAKKDVVSWTALINGCLRNGRAVEALECFVEMRSSGVEVDEVTIVSVLC 212
Query: 164 SSVHLGGIWECRMLHGLVI---KLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERN 220
++ L +W R +HG + +++ D V + + L++MY C +A +F+EM RN
Sbjct: 213 AAAMLRDVWFGRWVHGFYVESGRVIWD--VYVGSALVDMYSKCGYCDDAVKVFNEMPTRN 270
Query: 221 IVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLC 280
+VSW G +I GY+Q R EAL +++ M+
Sbjct: 271 LVSW-------------------------------GALIAGYVQCNRYKEALKVFQEMII 299
Query: 281 DGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINL 340
+GI PN + ++AC + + +G +H + ++ + ++ Y+ CG ++
Sbjct: 300 EGIEPNQSTVTSALTACAQLGSLDQGRWLHEYVDRSKLGLNSKLGTALVDMYSKCGCVDE 359
Query: 341 ARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQP 400
A L FE + W A+I G G D S
Sbjct: 360 ALLVFEKLPAKDVYPWTAMINGLAMRG---------------DALS-------------- 390
Query: 401 NMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVL-NNSITLNDNLSAA 459
+L LF M+ + V+PN +T + V A A G + EG ++ + + N +
Sbjct: 391 --SLNLFSQMIRSRVQPNGVTFLGVLSACAHGGLVDEGLELFRLMICDYRLEPNVDHYGC 448
Query: 460 IIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMH 500
++D+ + G + A + F + W A+ G +H
Sbjct: 449 MVDLLGRAGRLEEAIK-FIESMPMEPTPGVWGALFSGCMIH 488
Score = 95.5 bits (236), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 135/286 (47%), Gaps = 40/286 (13%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSG-LESNTFIQNSLINLYAKCGLISQAKSMF 81
E+ +VS L + V G+ +H +SG + + ++ ++L+++Y+KCG A +F
Sbjct: 204 EVTIVSVLCAAAMLRDVWFGRWVHGFYVESGRVIWDVYVGSALVDMYSKCGYCDDAVKVF 263
Query: 82 DSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALE 141
+ T + V+ +I+GY++ +R ++EAL+
Sbjct: 264 NEMPTRNLVSWGALIAGYVQCNR-------------------------------YKEALK 292
Query: 142 VFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYC 201
VF++M I G+ PN+ T+ S +++ LG + + R LH V + + + T L++MY
Sbjct: 293 VFQEMIIEGIEPNQSTVTSALTACAQLGSLDQGRWLHEYVDRSKLGLNSKLGTALVDMYS 352
Query: 202 VCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDG 261
C + EA +F+++ +++ W M+NG A G + LF ++ V G G
Sbjct: 353 KCGCVDEALLVFEKLPAKDVYPWTAMINGLAMRGDALSSLNLFSQMIRSRVQPNGVTFLG 412
Query: 262 YLQV----ERLSEALTMYRAMLCD-GIAPN---DVMIVDLISACGR 299
L + E L ++R M+CD + PN +VDL+ GR
Sbjct: 413 VLSACAHGGLVDEGLELFRLMICDYRLEPNVDHYGCMVDLLGRAGR 458
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 96/239 (40%), Gaps = 64/239 (26%)
Query: 25 ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSC 84
+ SAL C+ ++ QG+ +H + +S L N+ + +L+++Y+KCG +
Sbjct: 308 TVTSALTACAQLGSLDQGRWLHEYVDRSKLGLNSKLGTALVDMYSKCGCV---------- 357
Query: 85 STLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFR 144
++A VF+K P K +T+MI G A +L +F
Sbjct: 358 ---------------------DEALLVFEKLPAKDVYPWTAMINGLAMRGDALSSLNLFS 396
Query: 145 DMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGL-VIKLMIDGFVIISTNLLNMYCVC 203
M V PN VT V+S+ H G + E GL + +LMI C
Sbjct: 397 QMIRSRVQPNGVTFLGVLSACAHGGLVDE-----GLELFRLMI--------------C-- 435
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVS-WGTMIDG 261
D E N+ + M++ +AG +E A + E +P + WG + G
Sbjct: 436 ----------DYRLEPNVDHYGCMVDLLGRAGRLEEAIKFIESMPMEPTPGVWGALFSG 484
>gi|358347043|ref|XP_003637572.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503507|gb|AES84710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 833
Score = 307 bits (787), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 208/638 (32%), Positives = 327/638 (51%), Gaps = 86/638 (13%)
Query: 42 GQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIR 101
G IH + + G ESN F+ N++I++Y KC + A
Sbjct: 145 GASIHGCVIRLGFESNVFVCNAVISMYGKCKAVVHA------------------------ 180
Query: 102 NDRLNDAREVFDKTPIK--C-CVSYTSMIMGFAQNDCWREALEVFRDMRI-LGVIPNEVT 157
R+VFD+ + C V++ S++ ++ A+ +FR+M + G++P+ V
Sbjct: 181 -------RKVFDELCYRGICDSVTWNSIVSVYSHCFVPNVAVSLFREMTVGYGILPDTVG 233
Query: 158 LASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMK 217
+ +++ +LG R +HG ++ + V + L++MY C + +A +F+ M+
Sbjct: 234 VVNILPVCGYLGLGLCGRQVHGFCVRSGLVEDVFVGNALVDMYAKCGKMEDANKVFERMR 293
Query: 218 ERNIVSWNVMLNGFAKAGLVELARELF-----ERIPSKDVVSWGTMIDGYLQVERLSEAL 272
+++V+WN M+ G+++ G E A LF E+I S DVV+W ++I GY Q EA+
Sbjct: 294 FKDVVTWNAMVTGYSQNGRFEDALSLFGKMREEKIES-DVVTWSSVISGYAQRGFGCEAM 352
Query: 273 TMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFY 332
++R M PN V ++ L+SAC A G + H VK FI
Sbjct: 353 DVFRQMCGCRCRPNVVTLMSLLSACASVGALLHGKETHCYSVK-------FILK------ 399
Query: 333 AACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNM--QKRDVYSWSAM 390
G N D +A NALI + + +E AR +F+ + + RDV +W+ M
Sbjct: 400 ---GEHN--------DDTDDLAVINALIDMYAKCKSLEVARAMFDEICPKDRDVVTWTVM 448
Query: 391 ISGYAQNEQPNMALELFHGM--VDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNN 448
I GYAQ+ N AL+LF M +D + PN+ T+ V A A LK G+ H YVL
Sbjct: 449 IGGYAQHGDANHALQLFSEMFKIDNCIVPNDFTISCVLMACARLAALKFGKQIHAYVLRR 508
Query: 449 SITLNDNLSAA--IIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLT 506
S +D L A +IDMY+K G ++TA VF + R + W +++ G MHG +
Sbjct: 509 SRIDSDVLFVANCLIDMYSKSGDVDTAQVVFDSMSKR--NAVSWTSLLTGYGMHGRSEDA 566
Query: 507 LKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVD 566
+++ ++ K + L+ ITF+ VL C H+G+ D G V+P ++HY CMVD
Sbjct: 567 FRVFDEMRKEALVLDGITFLVVLYACSHSGM-DFG------------VDPGVEHYACMVD 613
Query: 567 LLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPS 626
LLGRAG+L +A +I MP++ V+W LL+A RIH N E+ E AAK L L+ + +
Sbjct: 614 LLGRAGRLGEAMRLINDMPIEPTPVVWIALLSACRIHSNEELAEFAAKKLLELKADNDGT 673
Query: 627 RVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
LLSNIYA+A RW+D I M+ G+K++PG+S V
Sbjct: 674 YTLLSNIYANARRWKDVARIGYLMKRTGIKKIPGWSWV 711
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 149/531 (28%), Positives = 253/531 (47%), Gaps = 47/531 (8%)
Query: 95 MISGYIRNDRLNDAREVFDK--TPIKCCVSYTSMIMGFAQN-DCWREALEVFRDMRILGV 151
+I YI ++ + +A + +K TP V + + ++ A + + AL +FR M+ L
Sbjct: 63 LIYTYISSNSITNAILLLEKNVTPSHSSVYWWNQLIRHALHFNSPNTALRLFRRMKTLHW 122
Query: 152 IPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARS 211
P+ T V + + +HG VI+L + V + +++MY C ++V AR
Sbjct: 123 TPDHYTFPFVFKACGEISNFELGASIHGCVIRLGFESNVFVCNAVISMYGKCKAVVHARK 182
Query: 212 LFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEA 271
+FDE+ R I D V+W +++ Y + A
Sbjct: 183 VFDELCYRGIC----------------------------DSVTWNSIVSVYSHCFVPNVA 214
Query: 272 LTMYRAMLCD-GIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIH 330
++++R M GI P+ V +V+++ CG G Q+H V++G F+ ++
Sbjct: 215 VSLFREMTVGYGILPDTVGVVNILPVCGYLGLGLCGRQVHGFCVRSGLVEDVFVGNALVD 274
Query: 331 FYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKR----DVYS 386
YA CG++ A FE + +WNA++ G+ +NG EDA LF M++ DV +
Sbjct: 275 MYAKCGKMEDANKVFERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGKMREEKIESDVVT 334
Query: 387 WSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVL 446
WS++ISGYAQ A+++F M +PN +T++S+ A AS G L G+ H Y +
Sbjct: 335 WSSVISGYAQRGFGCEAMDVFRQMCGCRCRPNVVTLMSLLSACASVGALLHGKETHCYSV 394
Query: 447 -------NNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAM 499
+N T + + A+IDMYAKC S+ A +F I + V W +I G A
Sbjct: 395 KFILKGEHNDDTDDLAVINALIDMYAKCKSLEVARAMFDEICPKDRDVVTWTVMIGGYAQ 454
Query: 500 HGDANLTLKIYSDLEKRN--IKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPD 557
HGDAN L+++S++ K + I N T VL C + G++ + ++ D
Sbjct: 455 HGDANHALQLFSEMFKIDNCIVPNDFTISCVLMACARLAALKFGKQIHAYVLRRSRIDSD 514
Query: 558 LKHYG-CMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVE 607
+ C++D+ ++G ++ A+ V SM K + V W +LL +HG E
Sbjct: 515 VLFVANCLIDMYSKSGDVDTAQVVFDSMS-KRNAVSWTSLLTGYGMHGRSE 564
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 59/97 (60%), Gaps = 4/97 (4%)
Query: 20 SDYELALVSALRYCSAHIAVSQGQQIHSLIFK-SGLESNT-FIQNSLINLYAKCGLISQA 77
+D+ ++ V L C+ A+ G+QIH+ + + S ++S+ F+ N LI++Y+K G + A
Sbjct: 478 NDFTISCV--LMACARLAALKFGKQIHAYVLRRSRIDSDVLFVANCLIDMYSKSGDVDTA 535
Query: 78 KSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDK 114
+ +FDS S + V+ +++GY + R DA VFD+
Sbjct: 536 QVVFDSMSKRNAVSWTSLLTGYGMHGRSEDAFRVFDE 572
>gi|242052493|ref|XP_002455392.1| hypothetical protein SORBIDRAFT_03g010050 [Sorghum bicolor]
gi|241927367|gb|EES00512.1| hypothetical protein SORBIDRAFT_03g010050 [Sorghum bicolor]
Length = 506
Score = 307 bits (787), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 144/361 (39%), Positives = 229/361 (63%), Gaps = 5/361 (1%)
Query: 306 GLQIHSIIVKAGFDCYD-FIQATIIHFYAACGRINLARLQF-ELGIKDHIASWNALIAGF 363
G Q+HS++++ G D + A+++ Y C + AR F E+ ++D + +WN +IAG+
Sbjct: 97 GPQLHSLLLRTGHVASDTHVSASLVQLYCTCRHVADARSVFHEMAVRD-VVAWNVMIAGY 155
Query: 364 IRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMV 423
++ G + AR+LF+ M +R+V SW+ +I GYAQ +P A+E+F M G++P+ + ++
Sbjct: 156 VKAGDLAHARELFDAMPERNVVSWTTVIGGYAQMRRPEEAVEVFRRMQVEGIEPDGVALL 215
Query: 424 SVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDR 483
SV A G + G W H +V+ + L +IIDMY KCG I A EVF + ++
Sbjct: 216 SVLSACGDLGAVDLGEWVHRFVVRRGLRQEIPLMNSIIDMYMKCGCIEKAVEVFEGMEEK 275
Query: 484 TTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGER 543
SV W +I G A+HG ++++ +E+ N+ N +TF+ +LS C H GL DLG
Sbjct: 276 --SVVTWTTLIAGFALHGLGLQAVEMFRRMERENMAPNDVTFLAILSACSHVGLTDLGRW 333
Query: 544 YFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIH 603
YF M S Y ++P ++HYGCMVDLLGRAG L++A+++++ MP+KA+ IWG LLAASR H
Sbjct: 334 YFNIMVSQYRIKPQVEHYGCMVDLLGRAGCLKEAQDLVKDMPLKANAAIWGALLAASRTH 393
Query: 604 GNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSG 663
G+ ++GE A L L+PS+ + +LLSNI+A+ RW+D +RK M++ G++ +PG S
Sbjct: 394 GDADLGEEALVHLIELEPSNSGNYILLSNIFAEQERWDDVSKLRKAMKERGLRNVPGASS 453
Query: 664 V 664
+
Sbjct: 454 I 454
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 96/315 (30%), Positives = 160/315 (50%), Gaps = 33/315 (10%)
Query: 192 ISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKD 251
+S +L+ +YC C + +ARS+F EM R++V+WNVM+ G+ KAG + ARELF+ +P ++
Sbjct: 116 VSASLVQLYCTCRHVADARSVFHEMAVRDVVAWNVMIAGYVKAGDLAHARELFDAMPERN 175
Query: 252 VVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHS 311
VVSW T+I GY Q+ R EA+ ++R M +GI P+ V ++ ++SACG A G +H
Sbjct: 176 VVSWTTVIGGYAQMRRPEEAVEVFRRMQVEGIEPDGVALLSVLSACGDLGAVDLGEWVHR 235
Query: 312 IIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIED 371
+V+ G + +II Y CG I A FE + + +W LIAGF +G+
Sbjct: 236 FVVRRGLRQEIPLMNSIIDMYMKCGCIEKAVEVFEGMEEKSVVTWTTLIAGFALHGLGLQ 295
Query: 372 ARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIAS 431
A ++F M E+ NMA PN++T +++ A +
Sbjct: 296 AVEMFRRM------------------ERENMA-------------PNDVTFLAILSACSH 324
Query: 432 SGTLKEGRWAHEYVLNN-SITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPW 490
G GRW +++ I ++D+ + G + A ++ + + + + W
Sbjct: 325 VGLTDLGRWYFNIMVSQYRIKPQVEHYGCMVDLLGRAGCLKEAQDLVKDMPLKANA-AIW 383
Query: 491 NAIICGLAMHGDANL 505
A++ HGDA+L
Sbjct: 384 GALLAASRTHGDADL 398
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 83/257 (32%), Positives = 143/257 (55%), Gaps = 32/257 (12%)
Query: 42 GQQIHSLIFKSG-LESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYI 100
G Q+HSL+ ++G + S+T + SL+ LY C ++ A+S+F + D VA N+MI+GY+
Sbjct: 97 GPQLHSLLLRTGHVASDTHVSASLVQLYCTCRHVADARSVFHEMAVRDVVAWNVMIAGYV 156
Query: 101 RNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLAS 160
+ L ARE+FD P + VS+T++I G+AQ EA+EVFR M++ G+ P+ V L S
Sbjct: 157 KAGDLAHARELFDAMPERNVVSWTTVIGGYAQMRRPEEAVEVFRRMQVEGIEPDGVALLS 216
Query: 161 VISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERN 220
V+S+ LG + +H V++ + + + ++++MY C + +A +F+ M+E++
Sbjct: 217 VLSACGDLGAVDLGEWVHRFVVRRGLRQEIPLMNSIIDMYMKCGCIEKAVEVFEGMEEKS 276
Query: 221 IVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLC 280
+V+W ++ GFA GL G +A+ M+R M
Sbjct: 277 VVTWTTLIAGFALHGL------------------------GL-------QAVEMFRRMER 305
Query: 281 DGIAPNDVMIVDLISAC 297
+ +APNDV + ++SAC
Sbjct: 306 ENMAPNDVTFLAILSAC 322
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 101/236 (42%), Gaps = 45/236 (19%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+AL+S L C AV G+ +H + + GL + NS+I++Y KCG I +A
Sbjct: 212 VALLSVLSACGDLGAVDLGEWVHRFVVRRGLRQEIPLMNSIIDMYMKCGCIEKAV----- 266
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
EVF+ K V++T++I GFA + +A+E+F
Sbjct: 267 --------------------------EVFEGMEEKSVVTWTTLIAGFALHGLGLQAVEMF 300
Query: 144 RDMRILGVIPNEVTLASVISSSVHLG----GIWECR-MLHGLVIKLMIDGFVIISTNLLN 198
R M + PN+VT +++S+ H+G G W M+ IK ++ + + L
Sbjct: 301 RRMERENMAPNDVTFLAILSACSHVGLTDLGRWYFNIMVSQYRIKPQVEHYGCMVDLLGR 360
Query: 199 MYCVCSSLVEARSLFDEMK-ERNIVSWNVMLNGFAKAGLVELARE----LFERIPS 249
C L EA+ L +M + N W +L G +L E L E PS
Sbjct: 361 AGC----LKEAQDLVKDMPLKANAAIWGALLAASRTHGDADLGEEALVHLIELEPS 412
>gi|357521295|ref|XP_003630936.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524958|gb|AET05412.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 959
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 187/641 (29%), Positives = 312/641 (48%), Gaps = 95/641 (14%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
++ V L C+ V G Q+H L+ +SG ES
Sbjct: 279 VSFVCLLSVCATRGIVRAGIQLHGLVIRSGFES--------------------------- 311
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
DP N +I+ Y + L DAR++FD P V++ +I G+ QN EA+ +F
Sbjct: 312 ----DPTVANTIITMYSKCGNLFDARKIFDIMPQTDTVTWNGLIAGYVQNGFTDEAVALF 367
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
+ M GV + +T AS + S + G + C+ +H +++ + V + + L+++Y
Sbjct: 368 KAMVTSGVKLDSITFASFLPSVLKSGSLKYCKEVHSYIVRHGVPFDVYLKSALVDIY--- 424
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYL 263
K G VE+A + F++ DV MI GY+
Sbjct: 425 ----------------------------FKGGDVEMACKTFQQNTLVDVAVCTAMISGYV 456
Query: 264 QVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDF 323
EAL ++R ++ +G+ PN + + ++ AC + G ++H I+K G +
Sbjct: 457 LNGLNVEALNLFRWLIQEGMVPNCLTMASVLPACAALASLKLGKELHCDILKKGLENVCQ 516
Query: 324 IQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRD 383
+ ++I + YA GR++LA Q F M +D
Sbjct: 517 VGSSITYMYAKSGRLDLAY-------------------------------QFFRRMPVKD 545
Query: 384 VYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHE 443
W+ MI ++QN +P +A++LF M +G K + +++ + A A+ L G+ H
Sbjct: 546 SVCWNLMIVSFSQNGKPELAIDLFRQMGTSGTKFDSVSLSATLSACANYPALYYGKELHC 605
Query: 444 YVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDA 503
+V+ NS + +++ +IDMY+KCG + A VF + D VS WN+II HG
Sbjct: 606 FVVRNSFISDTFVASTLIDMYSKCGKLALARSVF-DMMDWKNEVS-WNSIIAAYGNHGRP 663
Query: 504 NLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGC 563
L ++ ++ + I+ + +TF+ ++S C HAGLVD G YF+ M Y + ++H+ C
Sbjct: 664 RECLDLFHEMVEAGIQPDHVTFLVIMSACGHAGLVDEGIYYFRCMTEEYGICARMEHFAC 723
Query: 564 MVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSH 623
MVDL GRAG+L +A + I+SMP D WG+LL A R+HGNVE+ + A+K L L P++
Sbjct: 724 MVDLYGRAGRLHEAFDTIKSMPFTPDAGTWGSLLGACRLHGNVELAKLASKHLVELDPNN 783
Query: 624 GPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
VLLSN++A AG WE +R M++ G++++PG+S +
Sbjct: 784 SGYYVLLSNVHAGAGEWESVLKVRSLMKEKGVQKIPGYSWI 824
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 126/520 (24%), Positives = 228/520 (43%), Gaps = 76/520 (14%)
Query: 95 MISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPN 154
M+ Y+ D +F + + + + +I GF+ C+ AL F M V P+
Sbjct: 117 MLGMYVLCRSFKDVGNLFCRLQLCYSLPWNWLIRGFSMLGCFDFALMFFFRMLGSNVAPD 176
Query: 155 EVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFD 214
+ T VI + L + C+M+H L + + I ++L+ +Y + +A+ LFD
Sbjct: 177 KYTFPYVIKACGGLNNVPLCKMVHELARSMGFHMDLFIGSSLIKLYTDNGYIHDAKYLFD 236
Query: 215 EMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTM 274
E+ R+ + WNVMLNG+ K G + AL
Sbjct: 237 ELPVRDCILWNVMLNGYVKNG-------------------------------DFNSALGT 265
Query: 275 YRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAA 334
++ M + PN V V L+S C G+Q+H +++++GF+ + TII Y+
Sbjct: 266 FQEMRNSCVKPNSVSFVCLLSVCATRGIVRAGIQLHGLVIRSGFESDPTVANTIITMYSK 325
Query: 335 CGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGY 394
CG + AR F++ + +WN LIAG+++NG ++
Sbjct: 326 CGNLFDARKIFDIMPQTDTVTWNGLIAGYVQNGFTDE----------------------- 362
Query: 395 AQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLND 454
A+ LF MV +GVK + IT S ++ SG+LK + H Y++ + + +
Sbjct: 363 --------AVALFKAMVTSGVKLDSITFASFLPSVLKSGSLKYCKEVHSYIVRHGVPFDV 414
Query: 455 NLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLE 514
L +A++D+Y K G + A + F ++ V+ A+I G ++G L ++ L
Sbjct: 415 YLKSALVDIYFKGGDVEMACKTFQ--QNTLVDVAVCTAMISGYVLNGLNVEALNLFRWLI 472
Query: 515 KRNIKLNSITFIGVLSTCCHAGLVDLGERYF-----KSMKSVYNVEPDLKHYGCMVDLLG 569
+ + N +T VL C + LG+ K +++V V + + +
Sbjct: 473 QEGMVPNCLTMASVLPACAALASLKLGKELHCDILKKGLENVCQVGSSITY------MYA 526
Query: 570 RAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVG 609
++G+L+ A + R MP+K D V W ++ + +G E+
Sbjct: 527 KSGRLDLAYQFFRRMPVK-DSVCWNLMIVSFSQNGKPELA 565
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 103/440 (23%), Positives = 189/440 (42%), Gaps = 75/440 (17%)
Query: 173 ECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFA 232
+ R +H V+ ++G + + + +L MY +C S + +LF ++ + WN ++ GF+
Sbjct: 94 QVRQIHAKVLVCGMNGSLTLGSRMLGMYVLCRSFKDVGNLFCRLQLCYSLPWNWLIRGFS 153
Query: 233 KAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVD 292
G + A F R ML +AP+
Sbjct: 154 MLGCFDFALMFFFR-------------------------------MLGSNVAPDKYTFPY 182
Query: 293 LISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQF-ELGIKD 351
+I ACG +H + GF FI +++I Y G I+ A+ F EL ++D
Sbjct: 183 VIKACGGLNNVPLCKMVHELARSMGFHMDLFIGSSLIKLYTDNGYIHDAKYLFDELPVRD 242
Query: 352 HIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMV 411
I WN ++ G+++NG N AL F M
Sbjct: 243 CIL-WNVMLNGYVKNGDF-------------------------------NSALGTFQEMR 270
Query: 412 DAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSIN 471
++ VKPN ++ V + A+ G ++ G H V+ + + ++ II MY+KCG++
Sbjct: 271 NSCVKPNSVSFVCLLSVCATRGIVRAGIQLHGLVIRSGFESDPTVANTIITMYSKCGNLF 330
Query: 472 TAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLST 531
A ++F I +T +V+ WN +I G +G + + ++ + +KL+SITF L +
Sbjct: 331 DARKIF-DIMPQTDTVT-WNGLIAGYVQNGFTDEAVALFKAMVTSGVKLDSITFASFLPS 388
Query: 532 CCHAGLVDLGERYFKSMKSV---YNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKA 588
+G + +Y K + S + V D+ +VD+ + G +E A + + +
Sbjct: 389 VLKSGSL----KYCKEVHSYIVRHGVPFDVYLKSALVDIYFKGGDVEMACKTFQQNTL-V 443
Query: 589 DVVIWGTLLAASRIHG-NVE 607
DV + +++ ++G NVE
Sbjct: 444 DVAVCTAMISGYVLNGLNVE 463
>gi|297810761|ref|XP_002873264.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319101|gb|EFH49523.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 624
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 167/428 (39%), Positives = 251/428 (58%), Gaps = 4/428 (0%)
Query: 236 LVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLIS 295
L+ A +F +I + ++ + +I + S+A Y ML I P+++ LI
Sbjct: 68 LLGYAYGIFSQIQNPNLFVFNVLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIK 127
Query: 296 ACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLA-RLQFELGIKDHIA 354
A G Q HS IV+ GF +++ +++H YA CG I A R+ ++ +D +
Sbjct: 128 ASTEMECVVVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGLIAAAGRIFGQMPFRD-VV 186
Query: 355 SWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAG 414
SW +++AG+ + GM+EDAR++F+ M R++++WS MI+GYA+N A++LF M G
Sbjct: 187 SWTSMVAGYCKCGMVEDAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFELMKREG 246
Query: 415 VKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAF 474
V NE MVSV + A G L+ G AHEYV+ + +T+N L A++DMY +CG I A
Sbjct: 247 VVANETVMVSVISSCAHLGALEFGERAHEYVVKSHMTVNLILGTALVDMYWRCGEIEKAI 306
Query: 475 EVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCH 534
VF + D+ + W++II GLA+HG A+ + +S + + IT VLS C H
Sbjct: 307 RVFEELPDKDSL--SWSSIIKGLAVHGHAHKAIHYFSQMVRLGFSPRDITLTAVLSACSH 364
Query: 535 AGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWG 594
GLVD G +++MK Y +EP L+HYGC+VD+LGRAG+L +AE I MP+K + I G
Sbjct: 365 GGLVDKGLEIYENMKRDYGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMPVKPNAPILG 424
Query: 595 TLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCG 654
LL A +I+ N EV ER L ++P H VLLSNIYA AG+WE S+R M++
Sbjct: 425 ALLGACKIYKNTEVAERVGNMLIEVKPEHSGYYVLLSNIYACAGQWEKLESLRDIMKEKL 484
Query: 655 MKRLPGFS 662
+K+ PG+S
Sbjct: 485 VKKPPGWS 492
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 81/270 (30%), Positives = 144/270 (53%), Gaps = 31/270 (11%)
Query: 42 GQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIR 101
G+Q HS I + G +++ +++NSL+++YA CGLI+ A +F D V+ M++GY +
Sbjct: 138 GEQTHSQIVRFGFQNDVYVENSLVHMYANCGLIAAAGRIFGQMPFRDVVSWTSMVAGYCK 197
Query: 102 NDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASV 161
+ DARE+FD+ P + +++ MI G+A+N+C+ +A+++F M+ GV+ NE + SV
Sbjct: 198 CGMVEDAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFELMKREGVVANETVMVSV 257
Query: 162 ISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNI 221
ISS HLG + H V+K + +I+ T L++MY C + +A +F+E+ +++
Sbjct: 258 ISSCAHLGALEFGERAHEYVVKSHMTVNLILGTALVDMYWRCGEIEKAIRVFEELPDKDS 317
Query: 222 VSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCD 281
+SW+ ++ G A G A F Q+ RL
Sbjct: 318 LSWSSIIKGLAVHGHAHKAIHYFS------------------QMVRL------------- 346
Query: 282 GIAPNDVMIVDLISACGRAMAFGEGLQIHS 311
G +P D+ + ++SAC +GL+I+
Sbjct: 347 GFSPRDITLTAVLSACSHGGLVDKGLEIYE 376
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 105/442 (23%), Positives = 203/442 (45%), Gaps = 37/442 (8%)
Query: 27 VSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCST 86
++ L+ CS+ S + IH + ++ L S+ F+ + L+ L A C D +
Sbjct: 16 LALLQSCSS---FSDLKIIHGFLLRTHLISDVFVASRLLAL-ALC---------VDDSTF 62
Query: 87 LDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDM 146
P N++ GY A +F + + +I F+ +A + M
Sbjct: 63 HKPT--NLL--GY--------AYGIFSQIQNPNLFVFNVLIRCFSTGAEPSKAFGFYTQM 110
Query: 147 RILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSL 206
+ P+ +T +I +S + + H +++ V + +L++MY C +
Sbjct: 111 LKSRIWPDNITFPFLIKASTEMECVVVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGLI 170
Query: 207 VEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVE 266
A +F +M R++VSW M+ G+ K G+VE ARE+F+ +P +++ +W MI+GY +
Sbjct: 171 AAAGRIFGQMPFRDVVSWTSMVAGYCKCGMVEDAREMFDEMPHRNLFTWSIMINGYAKNN 230
Query: 267 RLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQA 326
+A+ ++ M +G+ N+ ++V +IS+C A G + H +VK+ +
Sbjct: 231 CFEKAIDLFELMKREGVVANETVMVSVISSCAHLGALEFGERAHEYVVKSHMTVNLILGT 290
Query: 327 TIIHFYAACGRINLA-RLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQK---- 381
++ Y CG I A R+ EL KD + SW+++I G +G A F+ M +
Sbjct: 291 ALVDMYWRCGEIEKAIRVFEELPDKDSL-SWSSIIKGLAVHGHAHKAIHYFSQMVRLGFS 349
Query: 382 -RDVYSWSAMISGYAQNEQPNMALELFHGMV-DAGVKPNEITMVSVFCAIASSGTLKEGR 439
RD+ + +A++S + + LE++ M D G++P + + +G L E
Sbjct: 350 PRDI-TLTAVLSACSHGGLVDKGLEIYENMKRDYGIEPRLEHYGCIVDMLGRAGKLAE-- 406
Query: 440 WAHEYVLNNSITLNDNLSAAII 461
A ++L + N + A++
Sbjct: 407 -AENFILKMPVKPNAPILGALL 427
>gi|449446195|ref|XP_004140857.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 593
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 187/579 (32%), Positives = 302/579 (52%), Gaps = 34/579 (5%)
Query: 87 LDPVACNIMISGY-IRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRD 145
+DP + + +I Y + L A VF++ + + MI G +++D +A+ +
Sbjct: 44 IDPSSISEVIKHYALSPQSLPKAHFVFNQIQRPTLLVWNHMIHGLSKSDRPNDAIHFYNT 103
Query: 146 MRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSS 205
M G+ + +T + S + + + +M+ +KL + ++ +S L++MY
Sbjct: 104 MYYKGIQGSHLTFIFLFKSCARVSDVRQGQMVRVHSMKLGFESYLFVSNALIHMYVCFGE 163
Query: 206 LVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQV 265
L A+ +FD M E +DVVSW ++I GY Q
Sbjct: 164 LAMAQKVFDGMLE-------------------------------RDVVSWNSIICGYYQF 192
Query: 266 ERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQ 325
R + L ++R M + + V ++ ISA + G + I + G ++
Sbjct: 193 NRFKKVLDLFREMQAINVRADSVTMMKAISATCFLSEWEMGDYLVKYIDEHGVVVDLYLG 252
Query: 326 ATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVY 385
T+I Y G I+ A F + +I SWNA+I G+ + G + A++LFN M RDV
Sbjct: 253 NTLIDMYGRRGMIDFAGRVFYQMKEKNIVSWNAMIMGYAKVGNLVAAKKLFNEMPSRDVI 312
Query: 386 SWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYV 445
SW++MI GY+ +Q A++LF M+ + VKP+EIT+ + A A G+L G H+Y+
Sbjct: 313 SWTSMIIGYSLAKQHAEAVKLFQEMMVSMVKPDEITVATALSACAHLGSLDAGEAVHDYI 372
Query: 446 LNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANL 505
+ I + + ++IDMY KCG + A +VF ++ R SVS W +II GLA++G A
Sbjct: 373 RKHDIKSDVFVGNSLIDMYCKCGVVEKALQVFNDMKTRD-SVS-WTSIISGLAVNGFAES 430
Query: 506 TLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMV 565
L ++ + K I TF+GVL C H GLVD G +FKSM++ Y + P++KHYGC+V
Sbjct: 431 ALNVFDQMLKEGICPTHGTFVGVLLACAHVGLVDKGVEHFKSMENTYRLAPEMKHYGCVV 490
Query: 566 DLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGP 625
DLL R+G L+ A I+ MP+ DVVIW LL+A ++HGN+ + E +K L L PS+
Sbjct: 491 DLLCRSGYLDMAYNFIKKMPIVPDVVIWRILLSACKLHGNLVLAEIVSKKLLVLDPSNNG 550
Query: 626 SRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
+ VL S+ YA + RW+D IRK M +++ +S +
Sbjct: 551 NYVLSSSTYAGSDRWDDVIKIRKLMEVTNLQKPCAYSSI 589
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 128/510 (25%), Positives = 224/510 (43%), Gaps = 82/510 (16%)
Query: 2 PLDHFHSVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQ 61
P D H +Q S L + + C+ V QGQ + K G ES F+
Sbjct: 94 PNDAIHFYNTMYYKGIQGS--HLTFIFLFKSCARVSDVRQGQMVRVHSMKLGFESYLFVS 151
Query: 62 NSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCV 121
N+LI++Y G ++ A+ +FD D V+ N +I GY + +R
Sbjct: 152 NALIHMYVCFGELAMAQKVFDGMLERDVVSWNSIICGYYQFNR----------------- 194
Query: 122 SYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLG----GIWECRML 177
+++ L++FR+M+ + V + VT+ IS++ L G + + +
Sbjct: 195 --------------FKKVLDLFREMQAINVRADSVTMMKAISATCFLSEWEMGDYLVKYI 240
Query: 178 --HGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAG 235
HG+V+ L + L++MY + A +F +MKE+NIVSWN M+ G+AK G
Sbjct: 241 DEHGVVVDLY------LGNTLIDMYGRRGMIDFAGRVFYQMKEKNIVSWNAMIMGYAKVG 294
Query: 236 LVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLIS 295
+ A++LF +PS+DV+SW +MI GY ++ +EA+ +++ M+ + P+++ + +S
Sbjct: 295 NLVAAKKLFNEMPSRDVISWTSMIIGYSLAKQHAEAVKLFQEMMVSMVKPDEITVATALS 354
Query: 296 ACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQF-ELGIKDHIA 354
AC + G +H I K F+ ++I Y CG + A F ++ +D +
Sbjct: 355 ACAHLGSLDAGEAVHDYIRKHDIKSDVFVGNSLIDMYCKCGVVEKALQVFNDMKTRDSV- 413
Query: 355 SWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAG 414
SW ++I+G NG E A +F+ M K G
Sbjct: 414 SWTSIISGLAVNGFAESALNVFDQMLKE-------------------------------G 442
Query: 415 VKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLS--AAIIDMYAKCGSINT 472
+ P T V V A A G + +G H + N+ L + ++D+ + G ++
Sbjct: 443 ICPTHGTFVGVLLACAHVGLVDKGV-EHFKSMENTYRLAPEMKHYGCVVDLLCRSGYLDM 501
Query: 473 AFEVFYHIRDRTTSVSPWNAIICGLAMHGD 502
A+ F V W ++ +HG+
Sbjct: 502 AYN-FIKKMPIVPDVVIWRILLSACKLHGN 530
>gi|449443656|ref|XP_004139593.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
chloroplastic-like [Cucumis sativus]
Length = 525
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 162/417 (38%), Positives = 248/417 (59%), Gaps = 7/417 (1%)
Query: 252 VVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACG--RAMAFGEGLQI 309
+V W + + Y + +LSEA + M G+ PN + + L+SAC + +F +
Sbjct: 57 IVLWTSSLARYCRNGQLSEAAAEFTRMRLAGVEPNHITFITLLSACADFPSESFFFASSL 116
Query: 310 HSIIVKAGFDC-YDFIQATIIHFYAACGRINLARLQF-ELGIKDHIASWNALIAGFIRNG 367
H K G D + + +I Y+ C ++ AR F LG+K+ + SWN ++ GF+RNG
Sbjct: 117 HGYACKYGLDTGHVMVGTALIDMYSKCAQLGHARKVFYNLGVKNSV-SWNTMLNGFMRNG 175
Query: 368 MIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFC 427
IE A QLF+ M RD SW+A+I+G ++ ALE FH M +GV + +++++V
Sbjct: 176 EIELAIQLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQRSGVAADYVSIIAVLA 235
Query: 428 AIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSV 487
A A G L G W H +V+ N +S ++IDMY++CG I A +VF + RT +
Sbjct: 236 ACADLGALTLGLWVHRFVMPQEFKDNIKISNSLIDMYSRCGCIEFARQVFVKMAKRT--L 293
Query: 488 SPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKS 547
WN+II G A++G A+ +L+ + ++K K + +++ G L+ C HAGLV+ G F +
Sbjct: 294 VSWNSIIVGFAVNGFADESLEFFYAMQKEGFKPDGVSYTGALTACSHAGLVNKGLELFDN 353
Query: 548 MKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVE 607
MKSV+ + P ++HYGC+VDL GRAG+LEDA +I MPMK + V+ G+LLAA R HG+V
Sbjct: 354 MKSVHKITPRIEHYGCIVDLYGRAGRLEDALNMIEEMPMKPNEVVLGSLLAACRTHGDVN 413
Query: 608 VGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
+ ER K L L P VLLSNIYA G+W+ A ++R+ M+ G+++ PG+S V
Sbjct: 414 LAERLMKHLFKLDPEGDAYYVLLSNIYAAIGKWDGANNVRRTMKARGVQKKPGYSSV 470
Score = 171 bits (434), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 123/478 (25%), Positives = 212/478 (44%), Gaps = 75/478 (15%)
Query: 112 FDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGG- 170
F+ + V +TS + + +N EA F MR+ GV PN +T +++S+
Sbjct: 49 FNPNSVDPIVLWTSSLARYCRNGQLSEAAAEFTRMRLAGVEPNHITFITLLSACADFPSE 108
Query: 171 -IWECRMLHGLVIKLMID-GFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVML 228
+ LHG K +D G V++ T L++MY C+ L AR +F + +N VSWN ML
Sbjct: 109 SFFFASSLHGYACKYGLDTGHVMVGTALIDMYSKCAQLGHARKVFYNLGVKNSVSWNTML 168
Query: 229 NGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDV 288
NGF + G +ELA +LF+ +P++D +SW +I+G L+ +AL + M G+A + V
Sbjct: 169 NGFMRNGEIELAIQLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQRSGVAADYV 228
Query: 289 MIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELG 348
I+ +++AC A GL +H ++ F I ++I Y+ CG I AR F
Sbjct: 229 SIIAVLAACADLGALTLGLWVHRFVMPQEFKDNIKISNSLIDMYSRCGCIEFARQVFVKM 288
Query: 349 IKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFH 408
K + SWN++I GF NG ++ +LE F+
Sbjct: 289 AKRTLVSWNSIIVGFAVNGFADE-------------------------------SLEFFY 317
Query: 409 GMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLN-NSITLNDNLSAAIIDMYAKC 467
M G KP+ ++ A + +G + +G + + + + IT I+D+Y +
Sbjct: 318 AMQKEGFKPDGVSYTGALTACSHAGLVNKGLELFDNMKSVHKITPRIEHYGCIVDLYGRA 377
Query: 468 GSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIG 527
G + A + +E+ +K N +
Sbjct: 378 GRLEDALNM------------------------------------IEEMPMKPNEVVLGS 401
Query: 528 VLSTCCHAGLVDLGERYFKSMKSVYNVEPDLK-HYGCMVDLLGRAGQLEDAEEVIRSM 584
+L+ C G V+L ER MK ++ ++P+ +Y + ++ G+ + A V R+M
Sbjct: 402 LLAACRTHGDVNLAERL---MKHLFKLDPEGDAYYVLLSNIYAAIGKWDGANNVRRTM 456
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 89/336 (26%), Positives = 162/336 (48%), Gaps = 49/336 (14%)
Query: 45 IHSLIFKSGLES-NTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRND 103
+H K GL++ + + +LI++Y+KC + A+ +F + + V+ N M++G++RN
Sbjct: 116 LHGYACKYGLDTGHVMVGTALIDMYSKCAQLGHARKVFYNLGVKNSVSWNTMLNGFMRNG 175
Query: 104 RLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVIS 163
+ A ++FD+ P + +S+T++I G ++ +ALE F M+ GV + V++ +V++
Sbjct: 176 EIELAIQLFDEMPTRDAISWTALINGLLKHGYSEQALECFHQMQRSGVAADYVSIIAVLA 235
Query: 164 SSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVS 223
+ LG + +H V+ + IS +L++MY C + AR +F +M +R +VS
Sbjct: 236 ACADLGALTLGLWVHRFVMPQEFKDNIKISNSLIDMYSRCGCIEFARQVFVKMAKRTLVS 295
Query: 224 WNVMLNGFA-----------------------------------KAGLVELARELFERIP 248
WN ++ GFA AGLV ELF+ +
Sbjct: 296 WNSIIVGFAVNGFADESLEFFYAMQKEGFKPDGVSYTGALTACSHAGLVNKGLELFDNMK 355
Query: 249 SKDVVS-----WGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRA--M 301
S ++ +G ++D Y + RL +AL M M + PN+V++ L++AC +
Sbjct: 356 SVHKITPRIEHYGCIVDLYGRAGRLEDALNMIEEM---PMKPNEVVLGSLLAACRTHGDV 412
Query: 302 AFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGR 337
E L H + D Y + + I YAA G+
Sbjct: 413 NLAERLMKHLFKLDPEGDAYYVLLSNI---YAAIGK 445
>gi|359481906|ref|XP_003632690.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like [Vitis vinifera]
Length = 635
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 180/540 (33%), Positives = 292/540 (54%), Gaps = 16/540 (2%)
Query: 126 MIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLM 185
MI +++ EA +F +MR P+ +T +VIS + G I E R L ++
Sbjct: 58 MITNLSKDGRIMEARRLFDEMRE----PDVITWTTVISGYIKCGMIEEARRLFD---RVD 110
Query: 186 IDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFE 245
V+ T ++ Y + + +A LF+EM +N+VSWN M++G+A+ G ++ A LFE
Sbjct: 111 AKKNVVTWTAMVGGYIRSNKISDAEKLFNEMPNKNVVSWNTMIDGYAQNGRIDSAMYLFE 170
Query: 246 RIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGE 305
++P ++VVSW T++ Q R+ EA ++ M + MI L S GR E
Sbjct: 171 KMPERNVVSWNTVMSMLAQCGRIEEARRLFDRMPERDVISWTAMIAGL-SKNGR---IDE 226
Query: 306 GLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIR 365
+ + + ++ +I YA R++ A FE + + SWN +I G I+
Sbjct: 227 ARLLFDRMPERNVVSWN----AMITGYAQNLRLDEALDLFERMPERDLPSWNTMITGLIQ 282
Query: 366 NGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDA-GVKPNEITMVS 424
NG + AR+LFN M K++V SW+ MI+G Q + AL++F M+ G KPN+ T VS
Sbjct: 283 NGDLRRARKLFNEMPKKNVISWTTMITGCVQEGESEEALKIFSRMLSTNGAKPNQGTFVS 342
Query: 425 VFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRT 484
V A ++ L EG+ H+ + + + +A+I+MY+KCG + TA ++F
Sbjct: 343 VLGACSNLAGLGEGQQVHQIISKTVYQDSTFVVSALINMYSKCGELGTARKMFDDGMTSQ 402
Query: 485 TSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERY 544
+ WN II A HG + + ++ K K + +T++G+LS C HAGLV+ G +Y
Sbjct: 403 RDLVSWNGIIAAYAHHGYGKEAINFFKEMRKSGFKPDDVTYVGLLSACSHAGLVEEGLKY 462
Query: 545 FKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHG 604
F + ++ HY C+VDL GRAG+L++A I + K +WG LLA +H
Sbjct: 463 FDELVKDRSILVREDHYACLVDLCGRAGRLKEAFGFIERLETKPSARVWGALLAGCNVHA 522
Query: 605 NVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
NV++G++AAK L ++P + + +LLSNIYA G+W +A +R +M+D G+K+ PG S +
Sbjct: 523 NVKIGKQAAKKLLEVEPENAGTYLLLSNIYASTGKWREAARVRLKMKDKGLKKQPGCSWI 582
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 140/493 (28%), Positives = 233/493 (47%), Gaps = 76/493 (15%)
Query: 49 IFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSC-STLDPVACNIMISGYIRNDRLND 107
+F E + ++I+ Y KCG+I +A+ +FD + + V M+ GYIR+++++D
Sbjct: 74 LFDEMREPDVITWTTVISGYIKCGMIEEARRLFDRVDAKKNVVTWTAMVGGYIRSNKISD 133
Query: 108 AREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVH 167
A ++F++ P K VS+ +MI G+AQN A+ +F M V V+ +V+S
Sbjct: 134 AEKLFNEMPNKNVVSWNTMIDGYAQNGRIDSAMYLFEKMPERNV----VSWNTVMSMLAQ 189
Query: 168 LGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVM 227
G I E R L M + VI T ++ + EAR LFD M ERN+VSWN M
Sbjct: 190 CGRIEEARRL----FDRMPERDVISWTAMIAGLSKNGRIDEARLLFDRMPERNVVSWNAM 245
Query: 228 LNGFAK--------------------------AGLVE-----LARELFERIPSKDVVSWG 256
+ G+A+ GL++ AR+LF +P K+V+SW
Sbjct: 246 ITGYAQNLRLDEALDLFERMPERDLPSWNTMITGLIQNGDLRRARKLFNEMPKKNVISWT 305
Query: 257 TMIDGYLQVERLSEALTMYRAML-CDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVK 315
TMI G +Q EAL ++ ML +G PN V ++ AC GEG Q+H II K
Sbjct: 306 TMITGCVQEGESEEALKIFSRMLSTNGAKPNQGTFVSVLGACSNLAGLGEGQQVHQIISK 365
Query: 316 AGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDH--IASWNALIAGFIRNGMIEDAR 373
+ F+ + +I+ Y+ CG + AR F+ G+ + SWN +IA + +G ++A
Sbjct: 366 TVYQDSTFVVSALINMYSKCGELGTARKMFDDGMTSQRDLVSWNGIIAAYAHHGYGKEAI 425
Query: 374 QLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSG 433
F M+K +G KP+++T V + A + +G
Sbjct: 426 NFFKEMRK-------------------------------SGFKPDDVTYVGLLSACSHAG 454
Query: 434 TLKEG-RWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNA 492
++EG ++ E V + SI + ++ A ++D+ + G + AF + + S W A
Sbjct: 455 LVEEGLKYFDELVKDRSILVREDHYACLVDLCGRAGRLKEAFGFIERLETK-PSARVWGA 513
Query: 493 IICGLAMHGDANL 505
++ G +H + +
Sbjct: 514 LLAGCNVHANVKI 526
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 94/324 (29%), Positives = 148/324 (45%), Gaps = 44/324 (13%)
Query: 48 LIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLND 107
L+F E N N++I YA+ + +A +F+ D + N MI+G I+N L
Sbjct: 229 LLFDRMPERNVVSWNAMITGYAQNLRLDEALDLFERMPERDLPSWNTMITGLIQNGDLRR 288
Query: 108 AREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF-RDMRILGVIPNEVTLASVISSSV 166
AR++F++ P K +S+T+MI G Q EAL++F R + G PN+ T SV+ +
Sbjct: 289 ARKLFNEMPKKNVISWTTMITGCVQEGESEEALKIFSRMLSTNGAKPNQGTFVSVLGACS 348
Query: 167 HLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDE--MKERNIVSW 224
+L G+ E + +H ++ K + + + L+NMY C L AR +FD+ +R++VSW
Sbjct: 349 NLAGLGEGQQVHQIISKTVYQDSTFVVSALINMYSKCGELGTARKMFDDGMTSQRDLVSW 408
Query: 225 NVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIA 284
N ++ +A G + EA+ ++ M G
Sbjct: 409 NGIIAAYAHHGYGK-------------------------------EAINFFKEMRKSGFK 437
Query: 285 PNDVMIVDLISACGRAMAFGEGLQIHSIIVK-----AGFDCYDFIQATIIHFYAACGRIN 339
P+DV V L+SAC A EGL+ +VK D Y A ++ GR+
Sbjct: 438 PDDVTYVGLLSACSHAGLVEEGLKYFDELVKDRSILVREDHY----ACLVDLCGRAGRLK 493
Query: 340 LARLQFE-LGIKDHIASWNALIAG 362
A E L K W AL+AG
Sbjct: 494 EAFGFIERLETKPSARVWGALLAG 517
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 109/422 (25%), Positives = 186/422 (44%), Gaps = 90/422 (21%)
Query: 220 NIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEA-------- 271
N+ N M+ +K G + AR LF+ + DV++W T+I GY++ + EA
Sbjct: 51 NVARCNWMITNLSKDGRIMEARRLFDEMREPDVITWTTVISGYIKCGMIEEARRLFDRVD 110
Query: 272 ----LTMYRAMLCDGIAPNDV-------------------MIVDLISACGR---AMAFGE 305
+ + AM+ I N + ++D + GR AM E
Sbjct: 111 AKKNVVTWTAMVGGYIRSNKISDAEKLFNEMPNKNVVSWNTMIDGYAQNGRIDSAMYLFE 170
Query: 306 GLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIR 365
+ +++ T++ A CGRI AR F+ + + SW A+IAG +
Sbjct: 171 KMPERNVVS----------WNTVMSMLAQCGRIEEARRLFDRMPERDVISWTAMIAGLSK 220
Query: 366 NGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSV 425
NG I++AR LF+ M +R+V SW+AMI+GYAQN + + AL+LF M + + P+ TM++
Sbjct: 221 NGRIDEARLLFDRMPERNVVSWNAMITGYAQNLRLDEALDLFERMPERDL-PSWNTMIT- 278
Query: 426 FCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTT 485
+ +G L+ R ++F + +
Sbjct: 279 --GLIQNGDLRRAR-----------------------------------KLFNEMPKK-- 299
Query: 486 SVSPWNAIICGLAMHGDANLTLKIYSDLEKRN-IKLNSITFIGVLSTCCH-AGLVDLGER 543
+V W +I G G++ LKI+S + N K N TF+ VL C + AGL + +
Sbjct: 300 NVISWTTMITGCVQEGESEEALKIFSRMLSTNGAKPNQGTFVSVLGACSNLAGLGEGQQV 359
Query: 544 YFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRS-MPMKADVVIWGTLLAASRI 602
+ K+VY + ++++ + G+L A ++ M + D+V W ++AA
Sbjct: 360 HQIISKTVYQDSTFV--VSALINMYSKCGELGTARKMFDDGMTSQRDLVSWNGIIAAYAH 417
Query: 603 HG 604
HG
Sbjct: 418 HG 419
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 137/318 (43%), Gaps = 47/318 (14%)
Query: 337 RINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQ 396
+I++ R F + ++A N +I ++G I +AR+LF+ M++ DV +W+ +ISGY +
Sbjct: 38 KISIPRKDFT--VDGNVARCNWMITNLSKDGRIMEARRLFDEMREPDVITWTTVISGYIK 95
Query: 397 NEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG-RWAHEYVLNNSITLNDN 455
A LF VDA K N +T ++ S + + + +E N ++ N
Sbjct: 96 CGMIEEARRLFD-RVDA--KKNVVTWTAMVGGYIRSNKISDAEKLFNEMPNKNVVSWN-- 150
Query: 456 LSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEK 515
+ID YA+ G I++A +F + +R +V WN ++ LA G +++ + +
Sbjct: 151 ---TMIDGYAQNGRIDSAMYLFEKMPER--NVVSWNTVMSMLAQCGRIEEARRLFDRMPE 205
Query: 516 RNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNV--------------------- 554
R++ I++ +++ G +D F M V
Sbjct: 206 RDV----ISWTAMIAGLSKNGRIDEARLLFDRMPERNVVSWNAMITGYAQNLRLDEALDL 261
Query: 555 -----EPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVG 609
E DL + M+ L + G L A ++ MP K +V+ W T++ G E
Sbjct: 262 FERMPERDLPSWNTMITGLIQNGDLRRARKLFNEMP-KKNVISWTTMITGCVQEGESEEA 320
Query: 610 ERAAK---SLAGLQPSHG 624
+ S G +P+ G
Sbjct: 321 LKIFSRMLSTNGAKPNQG 338
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 74/149 (49%), Gaps = 29/149 (19%)
Query: 25 ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSC 84
VS L CS + +GQQ+H +I K+ + +TF+ ++LIN+Y+KCG + A+ MFD
Sbjct: 339 TFVSVLGACSNLAGLGEGQQVHQIISKTVYQDSTFVVSALINMYSKCGELGTARKMFD-- 396
Query: 85 STLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFR 144
D + R++ VS+ +I +A + +EA+ F+
Sbjct: 397 ------------------DGMTSQRDL---------VSWNGIIAAYAHHGYGKEAINFFK 429
Query: 145 DMRILGVIPNEVTLASVISSSVHLGGIWE 173
+MR G P++VT ++S+ H G + E
Sbjct: 430 EMRKSGFKPDDVTYVGLLSACSHAGLVEE 458
>gi|125560040|gb|EAZ05488.1| hypothetical protein OsI_27705 [Oryza sativa Indica Group]
Length = 1165
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 190/612 (31%), Positives = 309/612 (50%), Gaps = 47/612 (7%)
Query: 62 NSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCV 121
N+L+ Y + G + A+ +FD + D ++ +++ Y L AR VFD P +
Sbjct: 42 NALLTSYGRRGRLRDAQLLFDQMPSRDVISWTALLTAYADGGDLASARLVFDDMPRRNAP 101
Query: 122 SYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHG-- 179
S+ +++ + + R A +F M N V+ ++IS G+ + MLH
Sbjct: 102 SWNALLSVYLRAARPRAAHALFYKM----PAKNAVSYGAIIS------GLAKAEMLHEAE 151
Query: 180 LVIKLMIDGF--VIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLV 237
LV + M + + S L+ Y L A +F+ M R+++SW+ M++G K G V
Sbjct: 152 LVYEEMPWQWRDPVGSNALMAGYLRVGELAMALRVFEGMTVRDVISWSAMVDGLCKHGSV 211
Query: 238 ELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISAC 297
AR +F+ +P ++VVSW +MI GY++ + L ++ M +G+ N + + AC
Sbjct: 212 SEARRVFDAMPERNVVSWTSMIRGYVKRGMCRDGLLLFLNMRREGVQVNTTTLSVALDAC 271
Query: 298 GRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWN 357
A EG+QIH++I+ GF+ F+ +II Y+ G + A+ F+ + I SWN
Sbjct: 272 AAASLAREGIQIHNLIISMGFELDIFLGDSIIIMYSRFGCMVDAKRAFDCMQQKDIVSWN 331
Query: 358 ALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMV------ 411
+LI G++++ M+E+A LF M ++D SW++M+ G+A ++ELF M
Sbjct: 332 SLITGYVQHDMVEEAHVLFKLMHQKDAVSWTSMVVGFANRGWMRESVELFEQMPVKDEVA 391
Query: 412 -------------------------DAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVL 446
G KPN I + A+AS L +GR AH Y +
Sbjct: 392 WTAIISSFITNGDYLSAVRWFCRMSQEGCKPNTIAFSCLLSALASLAMLNQGRQAHAYSI 451
Query: 447 NNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLT 506
N + + +++ MYAKCG + A+ VF I + S+ N++I HG
Sbjct: 452 NMGWVFDSAVHTSLVSMYAKCGRLAEAYHVFSSISN--PSLIAINSMITAFVQHGFVEDA 509
Query: 507 LKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVD 566
LK+++ ++ K N +TF+G+L+ C AG V G YF+SM+ VY VEP+ +HY CMVD
Sbjct: 510 LKLFTKMQNAGYKPNHVTFLGILTGCARAGFVQQGYNYFESMRPVYGVEPNPEHYTCMVD 569
Query: 567 LLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPS 626
LLGRAG L +A E+I SMP W LL+AS +H N+ + AA+ L P +
Sbjct: 570 LLGRAGLLAEALEMINSMPQNDHSDAWAALLSASSLHSNLAFAKIAAQKLLEKDPYDATA 629
Query: 627 RVLLSNIYADAG 638
+LS +++ AG
Sbjct: 630 YTVLSRMFSSAG 641
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 100/441 (22%), Positives = 206/441 (46%), Gaps = 59/441 (13%)
Query: 10 FNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYA 69
N ++ +Q + L++ AL C+A +G QIH+LI G E + F+ +S+I +Y+
Sbjct: 250 LNMRREGVQVNTTTLSV--ALDACAAASLAREGIQIHNLIISMGFELDIFLGDSIIIMYS 307
Query: 70 KCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMG 129
+ G + AK FD D V+ N +I+GY+++D + +A +F K VS+TSM++G
Sbjct: 308 RFGCMVDAKRAFDCMQQKDIVSWNSLITGYVQHDMVEEAHVLFKLMHQKDAVSWTSMVVG 367
Query: 130 FAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGI-WECRMLHGLVIKLMIDG 188
FA RE++E+F M + + ++S I++ +L + W CRM +G
Sbjct: 368 FANRGWMRESVELFEQMPVKDEVAWTAIISSFITNGDYLSAVRWFCRMSQ--------EG 419
Query: 189 FVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNV-----------MLNGFAKAGLV 237
N + C+ S+L + ++ ++ ++ + S N+ +++ +AK G +
Sbjct: 420 ---CKPNTIAFSCLLSALA-SLAMLNQGRQAHAYSINMGWVFDSAVHTSLVSMYAKCGRL 475
Query: 238 ELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISAC 297
A +F I + +++ +MI ++Q + +AL ++ M G PN V + +++ C
Sbjct: 476 AEAYHVFSSISNPSLIAINSMITAFVQHGFVEDALKLFTKMQNAGYKPNHVTFLGILTGC 535
Query: 298 GRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWN 357
RA V+ G++ ++ ++ G++ + +
Sbjct: 536 ARAG-----------FVQQGYNYFESMRPV-------------------YGVEPNPEHYT 565
Query: 358 ALIAGFIRNGMIEDARQLFNNMQKRD-VYSWSAMISGYAQNEQPNMALELFHGMVDAGVK 416
++ R G++ +A ++ N+M + D +W+A++S A + N+A
Sbjct: 566 CMVDLLGRAGLLAEALEMINSMPQNDHSDAWAALLS--ASSLHSNLAFAKIAAQKLLEKD 623
Query: 417 PNEITMVSVFCAIASSGTLKE 437
P + T +V + SS +++
Sbjct: 624 PYDATAYTVLSRMFSSAGMED 644
>gi|7671499|emb|CAB89340.1| putative protein [Arabidopsis thaliana]
Length = 514
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 161/464 (34%), Positives = 263/464 (56%), Gaps = 39/464 (8%)
Query: 235 GLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLI 294
G ++ A +LF+ IP DV ++ G Q + + +++Y M G++P+ ++
Sbjct: 26 GALKYAHKLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVL 85
Query: 295 SACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIA 354
AC + G H +V+ GF ++++ +I F+A CG + +A F+ K H
Sbjct: 86 KACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKV 145
Query: 355 SWNALIAGFIRNGMIEDA-------------------------------RQLFNNMQKRD 383
+W+++ +G+ + G I++A R+LF+ ++D
Sbjct: 146 AWSSMTSGYAKRGKIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKD 205
Query: 384 VYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHE 443
V +W+AMISGY P AL +F M DAG P+ +T++S+ A A G L+ G+ H
Sbjct: 206 VVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHI 265
Query: 444 YVL-----NNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLA 498
Y+L ++SI + + A+IDMYAKCGSI+ A EVF ++DR +S WN +I GLA
Sbjct: 266 YILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDR--DLSTWNTLIVGLA 323
Query: 499 MHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDL 558
+H A +++++ ++++ + N +TFIGV+ C H+G VD G +YF M+ +YN+EP++
Sbjct: 324 LH-HAEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNI 382
Query: 559 KHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAG 618
KHYGCMVD+LGRAGQLE+A + SM ++ + ++W TLL A +I+GNVE+G+ A + L
Sbjct: 383 KHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLLGACKIYGNVELGKYANEKLLS 442
Query: 619 LQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
++ VLLSNIYA G+W+ +RK D +K+ G S
Sbjct: 443 MRKDESGDYVLLSNIYASTGQWDGVQKVRKMFDDTRVKKPTGVS 486
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 144/292 (49%), Gaps = 42/292 (14%)
Query: 45 IHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDR 104
I S +F +++ +S+ + YAK G I +A +FD D VA N+MI+G ++
Sbjct: 131 IASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEMPYKDQVAWNVMITGCLKCKE 190
Query: 105 LNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISS 164
++ ARE+FD+ K V++ +MI G+ +EAL +F++MR G P+ VT+ S++S+
Sbjct: 191 MDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSA 250
Query: 165 SVHLGGIWECRMLHGLVIKLM-IDGFVIISTN----LLNMYCVCSSLVEARSLFDEMKER 219
LG + + LH +++ + + + T L++MY C S+ A +F +K+R
Sbjct: 251 CAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDR 310
Query: 220 NIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAML 279
++ +WN ++ G A E + E+FE +++RL
Sbjct: 311 DLSTWNTLIVGLA-LHHAEGSIEMFE------------------EMQRLK---------- 341
Query: 280 CDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHF 331
+ PN+V + +I AC + EG + S++ D Y+ I+ I H+
Sbjct: 342 ---VWPNEVTFIGVILACSHSGRVDEGRKYFSLMR----DMYN-IEPNIKHY 385
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 102/233 (43%), Gaps = 39/233 (16%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFK-----SGLESNTFIQNSLINLYAKCGLISQAK 78
+ ++S L C+ + G+++H I + S + T I N+LI++YAKCG I +A
Sbjct: 242 VTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAI 301
Query: 79 SMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWRE 138
+F R V D+ ++ ++I+G A +
Sbjct: 302 EVF---------------------------RGVKDRD----LSTWNTLIVGLALHHA-EG 329
Query: 139 ALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLM-IDGFVIISTNLL 197
++E+F +M+ L V PNEVT VI + H G + E R L+ + I+ + ++
Sbjct: 330 SIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMV 389
Query: 198 NMYCVCSSLVEARSLFDEMK-ERNIVSWNVMLNGFAKAGLVELARELFERIPS 249
+M L EA + MK E N + W +L G VEL + E++ S
Sbjct: 390 DMLGRAGQLEEAFMFVESMKIEPNAIVWRTLLGACKIYGNVELGKYANEKLLS 442
>gi|147807930|emb|CAN62155.1| hypothetical protein VITISV_032407 [Vitis vinifera]
Length = 585
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 195/624 (31%), Positives = 300/624 (48%), Gaps = 103/624 (16%)
Query: 40 SQGQQIHSLIFKSGLESNTFIQNSLIN-LYAKCGLISQAKSMFDSCSTLDPVACNIMISG 98
SQ QIH+ + + L S+TF + L++ + +K ++ A+ +F + CN M+
Sbjct: 25 SQILQIHAQLITTNLISDTFAASRLLDSVVSKTLNVNYAELVFAQIHQPNSFICNTMVKC 84
Query: 99 YIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTL 158
Y + TP AL + +MR G++ + T
Sbjct: 85 YTESS-----------TP--------------------ERALRFYAEMRKKGLLGDNYTY 113
Query: 159 ASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKE 218
V+ + + G+ E ++ G +K G V + L++MYC C AR++FD
Sbjct: 114 PFVLKACGAMCGLLEGGLVQGEAVKRGFGGDVFVVNGLISMYCRCGETGWARAVFD---- 169
Query: 219 RNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAM 278
GF++ KD+VSW +M+ GY+ + A M+ M
Sbjct: 170 -----------GFSE----------------KDLVSWNSMLGGYVWCGEMENAQNMFDEM 202
Query: 279 LCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRI 338
+ +MI G+ M G +
Sbjct: 203 PERDVVSWSIMI----DGYGKKM----------------------------------GEV 224
Query: 339 NLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNE 398
N AR+ F+ + SWN++I G+ + G +E AR++FB M +++V SWS MI GYA +
Sbjct: 225 NRARVFFDSMPTRDLVSWNSMIDGYAKVGEMEVAREIFBKMLQKNVISWSIMIDGYAXHR 284
Query: 399 QPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSA 458
AL LF M+ G+KP+ +++V A + G L +GRW H Y+ N + L+ +
Sbjct: 285 DSKEALNLFRQMLCQGIKPDRVSVVGAVSACSQLGALDQGRWIHLYMKRNRMLLDIVVQT 344
Query: 459 AIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNI 518
A++DMY KCGS + A +F + +R +V WN +I GL M+G L+ + +E I
Sbjct: 345 ALVDMYLKCGSXDEARXIFNSMPER--NVVSWNVMIVGLGMNGFGKEALECFXQMEMERI 402
Query: 519 KLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAE 578
++ + F+GVL C HA LV G F MK VY +EP L+HYGC+VDLLGRAGQL+ +
Sbjct: 403 PMDDLLFLGVLMACSHANLVTEGLHIFNQMKGVYRLEPKLEHYGCLVDLLGRAGQLDQIQ 462
Query: 579 EVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAG 638
+I+SMPMK + +WG+LL A RIH NV + E + LA L+ VL+SNIYAD G
Sbjct: 463 NIIQSMPMKPNAALWGSLLLACRIHQNVTLAEIVVERLAELKADDSGVYVLMSNIYADVG 522
Query: 639 RWEDAFSIRKEMRDCGMKRLPGFS 662
WE IRK M++ MK+ G S
Sbjct: 523 MWEGMLRIRKLMKERKMKKDIGRS 546
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 140/330 (42%), Gaps = 76/330 (23%)
Query: 1 TPLDHFHSVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFI 60
TP +K L +Y V L+ C A + +G + K G + F+
Sbjct: 90 TPERALRFYAEMRKKGLLGDNYTYPFV--LKACGAMCGLLEGGLVQGEAVKRGFGGDVFV 147
Query: 61 QNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYI-------------------- 100
N LI++Y +CG A+++FD S D V+ N M+ GY+
Sbjct: 148 VNGLISMYCRCGETGWARAVFDGFSEKDLVSWNSMLGGYVWCGEMENAQNMFDEMPERDV 207
Query: 101 ------------RNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF----- 143
+ +N AR FD P + VS+ SMI G+A+ A E+F
Sbjct: 208 VSWSIMIDGYGKKMGEVNRARVFFDSMPTRDLVSWNSMIDGYAKVGEMEVAREIFBKMLQ 267
Query: 144 --------------------------RDMRILGVIPNEVTLASVISSSVHLGGIWECRML 177
R M G+ P+ V++ +S+ LG + + R +
Sbjct: 268 KNVISWSIMIDGYAXHRDSKEALNLFRQMLCQGIKPDRVSVVGAVSACSQLGALDQGRWI 327
Query: 178 HGLVIK---LMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVM-----LN 229
H L +K +++D +++ T L++MY C S EAR +F+ M ERN+VSWNVM +N
Sbjct: 328 H-LYMKRNRMLLD--IVVQTALVDMYLKCGSXDEARXIFNSMPERNVVSWNVMIVGLGMN 384
Query: 230 GFAKAGLVELARELFERIPSKDVVSWGTMI 259
GF K L + ERIP D++ G ++
Sbjct: 385 GFGKEALECFXQMEMERIPMDDLLFLGVLM 414
>gi|225440783|ref|XP_002275884.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g37570 [Vitis vinifera]
Length = 561
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 199/658 (30%), Positives = 326/658 (49%), Gaps = 109/658 (16%)
Query: 9 VFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLY 68
F L++ D ++ + L+ C+ S +Q+H+ I + GL + FI + + L
Sbjct: 11 TFPDYLPTLRSFDTTSSISTLLKACTT---TSTLEQVHARIIRKGLHQDHFIISQFLTLC 67
Query: 69 AKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIM 128
S S+F+ S+ V N I GY N VS T
Sbjct: 68 NSLSNFSYTTSVFNGVSSPSTVLWNTYIKGYSENYS----------------VSLT---- 107
Query: 129 GFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDG 188
+ +F M+ +P++ T S+I + + G+ E HG ++ + G
Sbjct: 108 -----------VSLFIRMKRSDAVPDKFTYPSLIKACSKVCGVKEGVAFHGSAVRCGVGG 156
Query: 189 FVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAK-AGLVELARELFERI 247
V + T+L+++Y C ++ AR +FDEM ERN+VSW M+ G+A + LVE AR+LF+ +
Sbjct: 157 DVFVMTSLIDLYGKCGEILCARKVFDEMGERNVVSWTAMIAGYASFSDLVE-ARKLFDEM 215
Query: 248 PSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGL 307
P K+ VSW +I GY++ L A M+ M
Sbjct: 216 PEKNAVSWNAIISGYVKCGDLRSARKMFDEM----------------------------- 246
Query: 308 QIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNG 367
H +V T+I YA G + AR FE + + +W+ALI+G+++NG
Sbjct: 247 -PHRNVVSF---------TTMIDGYAKSGDMASARFVFEEAPERDVVAWSALISGYVQNG 296
Query: 368 MIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFC 427
QPN A+++F M VKP+E MVS+
Sbjct: 297 -------------------------------QPNEAVKIFLEMCSRNVKPDEFIMVSLMS 325
Query: 428 AIASSGTLKEGRWAHEYVLNNSITLND-NLSAAIIDMYAKCGSINTAFEVFYHIRDRTTS 486
A + G+L+ +W +YV +SI ++ ++ AA+IDM AKCGS++ A ++F + R
Sbjct: 326 ACSQMGSLELAKWVDDYVRKSSIDVHRAHVIAALIDMNAKCGSMDRATKLFEEMPKR--D 383
Query: 487 VSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFK 546
+ + +++ GL++HG + ++S + + + + F +L+ C AGLVD G YF+
Sbjct: 384 LISYCSMMQGLSIHGCGPQAVSLFSRMLNEGLTPDDVAFTVILTACSRAGLVDEGCYYFE 443
Query: 547 SMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNV 606
SMK+ Y++ P HY CMVDLLGRAG+L++A E+++SMP++ WG LL A ++H ++
Sbjct: 444 SMKTDYSIVPSPDHYACMVDLLGRAGRLKEAYELLKSMPVEPHAGAWGALLGACKLHCDI 503
Query: 607 EVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
E+GE A L L+P + + VLLSNIYA A +W D +R +MR+ G++++PG S +
Sbjct: 504 ELGEVVADQLFELEPQNAGNYVLLSNIYAAAEQWLDVSLLRNKMRERGIRKIPGCSWI 561
>gi|42567862|ref|NP_197034.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635759|sp|Q9LXF2.2|PP385_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g15300
gi|332004762|gb|AED92145.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 548
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 161/464 (34%), Positives = 263/464 (56%), Gaps = 39/464 (8%)
Query: 235 GLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLI 294
G ++ A +LF+ IP DV ++ G Q + + +++Y M G++P+ ++
Sbjct: 60 GALKYAHKLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVL 119
Query: 295 SACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIA 354
AC + G H +V+ GF ++++ +I F+A CG + +A F+ K H
Sbjct: 120 KACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKV 179
Query: 355 SWNALIAGFIRNGMIEDA-------------------------------RQLFNNMQKRD 383
+W+++ +G+ + G I++A R+LF+ ++D
Sbjct: 180 AWSSMTSGYAKRGKIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKD 239
Query: 384 VYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHE 443
V +W+AMISGY P AL +F M DAG P+ +T++S+ A A G L+ G+ H
Sbjct: 240 VVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHI 299
Query: 444 YVL-----NNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLA 498
Y+L ++SI + + A+IDMYAKCGSI+ A EVF ++DR +S WN +I GLA
Sbjct: 300 YILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDR--DLSTWNTLIVGLA 357
Query: 499 MHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDL 558
+H A +++++ ++++ + N +TFIGV+ C H+G VD G +YF M+ +YN+EP++
Sbjct: 358 LH-HAEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNI 416
Query: 559 KHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAG 618
KHYGCMVD+LGRAGQLE+A + SM ++ + ++W TLL A +I+GNVE+G+ A + L
Sbjct: 417 KHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLLGACKIYGNVELGKYANEKLLS 476
Query: 619 LQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
++ VLLSNIYA G+W+ +RK D +K+ G S
Sbjct: 477 MRKDESGDYVLLSNIYASTGQWDGVQKVRKMFDDTRVKKPTGVS 520
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 120/477 (25%), Positives = 207/477 (43%), Gaps = 53/477 (11%)
Query: 43 QQIHSLIFKSGLESNTFIQNSLINLYAKC----GLISQAKSMFDSCSTLDPVACNIMISG 98
+QIH+ + +GL SN + LI Y+ G + A +FD D CN ++ G
Sbjct: 29 KQIHASMVVNGLMSNLSVVGELI--YSASLSVPGALKYAHKLFDEIPKPDVSICNHVLRG 86
Query: 99 YIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDC----WREALEVFRDMRIL-GVIP 153
++ + ++ + K VS F C WR F + G +
Sbjct: 87 SAQSMKPEKTVSLYTEME-KRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVRHGFVL 145
Query: 154 NEVTLASVISSSVHLGGIWECRMLHGLVIKLMID---GFVIISTNLLNMYCVCSSLVEAR 210
NE ++I + G + G+ +L D + +++ + Y + EA
Sbjct: 146 NEYVKNALILFHANCGDL-------GIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAM 198
Query: 211 SLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSE 270
LFDEM ++ V+WNVM+ G K ++ ARELF+R KDVV+W MI GY+ E
Sbjct: 199 RLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKE 258
Query: 271 ALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIH 330
AL +++ M G P+ V I+ L+SAC G ++H I++ T I
Sbjct: 259 ALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPI- 317
Query: 331 FYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAM 390
WNALI + + G I+ A ++F ++ RD+ +W+ +
Sbjct: 318 -------------------------WNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTL 352
Query: 391 ISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSI 450
I G A + ++E+F M V PNE+T + V A + SG + EGR + ++ +
Sbjct: 353 IVGLALHHAEG-SIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGR-KYFSLMRDMY 410
Query: 451 TLNDNLS--AAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANL 505
+ N+ ++DM + G + AF ++ ++ W ++ ++G+ L
Sbjct: 411 NIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIV-WRTLLGACKIYGNVEL 466
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 99/233 (42%), Gaps = 39/233 (16%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESN-----TFIQNSLINLYAKCGLISQAK 78
+ ++S L C+ + G+++H I ++ S+ T I N+LI++YAKCG I +A
Sbjct: 276 VTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAI 335
Query: 79 SMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWRE 138
+F D N +I G + + A+
Sbjct: 336 EVFRGVKDRDLSTWNTLIVG---------------------------LALHHAEG----- 363
Query: 139 ALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLM-IDGFVIISTNLL 197
++E+F +M+ L V PNEVT VI + H G + E R L+ + I+ + ++
Sbjct: 364 SIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMV 423
Query: 198 NMYCVCSSLVEARSLFDEMK-ERNIVSWNVMLNGFAKAGLVELARELFERIPS 249
+M L EA + MK E N + W +L G VEL + E++ S
Sbjct: 424 DMLGRAGQLEEAFMFVESMKIEPNAIVWRTLLGACKIYGNVELGKYANEKLLS 476
>gi|218184996|gb|EEC67423.1| hypothetical protein OsI_34621 [Oryza sativa Indica Group]
Length = 799
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 197/698 (28%), Positives = 328/698 (46%), Gaps = 100/698 (14%)
Query: 52 SGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREV 111
SG F+ N L+ +YA+C + A+ +FD+ D V+ N M++ Y ++ A +
Sbjct: 46 SGFVPTAFVSNCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVAL 105
Query: 112 FDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGI 171
FD P VS+ +++ G+ Q ++E++++F +M GV P+ T A ++ S L +
Sbjct: 106 FDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEEL 165
Query: 172 WECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGF 231
+H L +K ++ V + L++MY C SL +A F M ERN VSW + G
Sbjct: 166 SLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGSAIAGC 225
Query: 232 AKAGLVELARELF---ERIP------------------------------------SKDV 252
+ ELF +R+ S D
Sbjct: 226 VQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDR 285
Query: 253 VSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLI-----------------S 295
V ++D Y + L++A + + + ++ M+V L S
Sbjct: 286 VVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLFMIRSSIRFDVVSLSGVFS 345
Query: 296 ACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIAS 355
AC + G Q+H + +K +++ Y C + A L F+ + S
Sbjct: 346 ACAETKGYFPGQQVHCLAIK-----------SVLDLYGKCKALMEAYLIFQGMKQKDSVS 394
Query: 356 WNALIAGFIRNGMIEDARQLFNNMQKRDVY------------------------------ 385
WNA+IA +NG +D FN M + D +
Sbjct: 395 WNAIIAALEQNGHYDDTILHFNEMLRFDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQV 454
Query: 386 -SWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEY 444
SW+A++SG++ N++ A + F M+D G+KP+ T +V A+ T++ G+ H
Sbjct: 455 VSWNAILSGFSLNKESEAAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQ 514
Query: 445 VLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDAN 504
++ + ++ +S+ ++DMYAKCG + + VF + R WNA+ICG A+HG
Sbjct: 515 IIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKR--DFVSWNAMICGYALHGLGV 572
Query: 505 LTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCM 564
L+++ ++K N+ N TF+ VL C H GL D G RYF M + Y +EP L+H+ CM
Sbjct: 573 EALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEHFACM 632
Query: 565 VDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHG 624
VD+LGR+ ++A + I SMP +AD VIW TLL+ +I +VE+ E AA ++ L P
Sbjct: 633 VDILGRSKGPQEAVKFINSMPFQADAVIWKTLLSICKIRQDVEIAELAASNVLLLDPDDS 692
Query: 625 PSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
+LLSN+YA++G+W D R+ ++ +K+ PG S
Sbjct: 693 SVYILLSNVYAESGKWADVSRTRRLLKQGRLKKEPGCS 730
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 121/461 (26%), Positives = 199/461 (43%), Gaps = 66/461 (14%)
Query: 151 VIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFV---IISTNLLNMYCVCSSLV 207
V P VT + V S G ++++ GFV +S LL MY C+
Sbjct: 11 VAPARVTFSRVFQSCAQ-AGREALAAGRAAHARMVVSGFVPTAFVSNCLLQMYARCAGAA 69
Query: 208 EARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVER 267
AR +FD M R+ VSWN ML ++ AG + A LF+ +P DVVSW ++ GY Q
Sbjct: 70 CARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGM 129
Query: 268 LSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQAT 327
E++ ++ M G++P+ L+ +C G+Q+H++ VK G + +
Sbjct: 130 FQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSA 189
Query: 328 IIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSW 387
++ Y C ++ DA F M +R+ SW
Sbjct: 190 LVDMYGKCRSLD-------------------------------DALCFFYGMPERNWVSW 218
Query: 388 SAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLN 447
+ I+G QNEQ LELF M G+ ++ + S F + A+ L GR H + +
Sbjct: 219 GSAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIK 278
Query: 448 NSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTL 507
N + + + AI+D+YAK S+ A F+ + + T S NA++ GL M
Sbjct: 279 NKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETS--NAMMVGLFMI------- 329
Query: 508 KIYSDLEKRNIKLNSITFIGVLSTCCHA-GLVDLGERYFKSMKSVYNVEPDLKHYGCMVD 566
+ +I+ + ++ GV S C G + + ++KSV +D
Sbjct: 330 -------RSSIRFDVVSLSGVFSACAETKGYFPGQQVHCLAIKSV-------------LD 369
Query: 567 LLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVE 607
L G+ L +A + + M K D V W ++AA +G+ +
Sbjct: 370 LYGKCKALMEAYLIFQGMKQK-DSVSWNAIIAALEQNGHYD 409
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 91/372 (24%), Positives = 168/372 (45%), Gaps = 55/372 (14%)
Query: 28 SALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTL 87
SA R C+A ++ G+Q+H+ K+ S+ + +++++YAK ++ A+ F
Sbjct: 255 SAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNH 314
Query: 88 DPVACNIMISGY------IRNDRLN---------DAREVFDKTPIKCCVSYTSMIMGFAQ 132
N M+ G IR D ++ + + F + C++ S++ + +
Sbjct: 315 TVETSNAMMVGLFMIRSSIRFDVVSLSGVFSACAETKGYFPGQQVH-CLAIKSVLDLYGK 373
Query: 133 NDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVII 192
EA +F+ M+ + V+ ++I +++ G ++ +LH L D FV
Sbjct: 374 CKALMEAYLIFQGMK----QKDSVSWNAII-AALEQNGHYDDTILH-FNEMLRFDAFV-- 425
Query: 193 STNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDV 252
++ +++MYC C + EA+ L D + + +VSWN +L+GF+ E A++ F
Sbjct: 426 ASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEAAQKFF-------- 477
Query: 253 VSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSI 312
SE L M G+ P+ ++ C G QIH
Sbjct: 478 ----------------SEMLDM-------GLKPDHFTFATVLDTCANLATIELGKQIHGQ 514
Query: 313 IVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDA 372
I+K ++I +T++ YA CG + + L FE K SWNA+I G+ +G+ +A
Sbjct: 515 IIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLGVEA 574
Query: 373 RQLFNNMQKRDV 384
++F MQK +V
Sbjct: 575 LRMFERMQKENV 586
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 122/261 (46%), Gaps = 42/261 (16%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
++L C+ GQQ+H L KS +++LY KC + +A +F
Sbjct: 338 VSLSGVFSACAETKGYFPGQQVHCLAIKS-----------VLDLYGKCKALMEAYLIFQG 386
Query: 84 CSTLDPVACNIMISGYIRNDRLND-------------------------------AREVF 112
D V+ N +I+ +N +D A+++
Sbjct: 387 MKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFDAFVASTVVDMYCKCGIIDEAQKLH 446
Query: 113 DKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIW 172
D+ + VS+ +++ GF+ N A + F +M +G+ P+ T A+V+ + +L I
Sbjct: 447 DRIGGQQVVSWNAILSGFSLNKESEAAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIE 506
Query: 173 ECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFA 232
+ +HG +IK + IS+ L++MY C + ++ +F+++++R+ VSWN M+ G+A
Sbjct: 507 LGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYA 566
Query: 233 KAGLVELARELFERIPSKDVV 253
GL A +FER+ ++VV
Sbjct: 567 LHGLGVEALRMFERMQKENVV 587
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 73/170 (42%), Gaps = 32/170 (18%)
Query: 10 FNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYA 69
F S+ ++ + L C+ + G+QIH I K + + +I ++L+++YA
Sbjct: 476 FFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLVDMYA 535
Query: 70 KCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMG 129
KCG + D+ VF+K + VS+ +MI G
Sbjct: 536 KCG-------------------------------DMPDSLLVFEKVEKRDFVSWNAMICG 564
Query: 130 FAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWE-CRMLH 178
+A + EAL +F M+ V+PN T +V+ + H+G + CR H
Sbjct: 565 YALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFH 614
>gi|326527617|dbj|BAK08083.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 642
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 183/557 (32%), Positives = 288/557 (51%), Gaps = 38/557 (6%)
Query: 108 AREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVH 167
AR +FD P ++ + ++ + L+ F M G + V S
Sbjct: 72 ARNLFDAVPRPAPALCSTFLSSLSRASSHHDLLQTFSSMHRKGAYVPSGCVPLVFKSCAL 131
Query: 168 LGGIWECRMLH--GLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWN 225
+ R +H LV L+ D FV+ T L++ Y + A S+FDEM ++ + N
Sbjct: 132 TASSCQGRQVHCHALVRGLLGDVFVL--TALVDFYAKNGDMESAVSVFDEMPVKDPIPIN 189
Query: 226 VMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAP 285
++ G++KAG V+ AR LF+ + + SW +MI Y EALT++ ML +G P
Sbjct: 190 CLITGYSKAGDVDKARRLFDGMERRTSASWNSMIACYAHGGEFREALTLFDRMLSEGARP 249
Query: 286 NDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQF 345
N + I + S C ++ G ++ +I + D +Q I+H
Sbjct: 250 NAITITSVFSICAKSGDLDTGKRVRDLIGE------DDLQNVIVH--------------- 288
Query: 346 ELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALE 405
AL+ +++ I+DAR+ F+ M +RDV +WS MI+GYAQN +P +LE
Sbjct: 289 -----------TALMEMYVKCRAIDDARREFDRMSQRDVVAWSTMIAGYAQNGRPLESLE 337
Query: 406 LFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYA 465
LF M +PNE+T+V V A A G+ + Y N + L L +A+IDMY
Sbjct: 338 LFERMKATDCRPNEVTLVGVISACAQLGSDELVEQIGNYAENQRLPLTSYLGSALIDMYT 397
Query: 466 KCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITF 525
+CG + A VF + + V WN++I GLAM+G A + +Y + + ++ N ITF
Sbjct: 398 RCGHVGRARSVFSRMEQK--GVITWNSMIRGLAMNGFAEDAISLYEKMAENGVQPNEITF 455
Query: 526 IGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMP 585
+ +L+ C HAGLVD G +F+ MK + V P ++H C+VDLL ++G L +A + I M
Sbjct: 456 VALLAACTHAGLVDQGMAFFEEMKREHLVSPQVEHCACIVDLLCKSGGLWEAYKFICDME 515
Query: 586 MKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFS 645
++ + VIW TLL++ R H +VE+ + A++ L ++P + VLLSNIYADAG W DA
Sbjct: 516 VEPNAVIWTTLLSSCRAHADVELAKLASRKLLAMEPDNSSIYVLLSNIYADAGLWGDARE 575
Query: 646 IRKEMRDCGMKRLPGFS 662
IR MR +++L +S
Sbjct: 576 IRDLMRSKNVQKLSAYS 592
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 123/477 (25%), Positives = 209/477 (43%), Gaps = 65/477 (13%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
+ C+ + QG+Q+H GL + F+ +L++ YAK G + A S+FD DP
Sbjct: 126 FKSCALTASSCQGRQVHCHALVRGLLGDVFVLTALVDFYAKNGDMESAVSVFDEMPVKDP 185
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
+ N +I+GY + ++ AR +FD + S+ SMI +A +REAL +F M
Sbjct: 186 IPINCLITGYSKAGDVDKARRLFDGMERRTSASWNSMIACYAHGGEFREALTLFDRMLSE 245
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
G PN +T+ SV S G + + + L+ + + VI+ T L+ MY C ++ +A
Sbjct: 246 GARPNAITITSVFSICAKSGDLDTGKRVRDLIGEDDLQN-VIVHTALMEMYVKCRAIDDA 304
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLS 269
R FD M +R++V+W+ M+ G+A+ G + ELFER+ + D
Sbjct: 305 RREFDRMSQRDVVAWSTMIAGYAQNGRPLESLELFERMKATDC----------------- 347
Query: 270 EALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATII 329
PN+V +V +ISAC + + QI + ++ + +I
Sbjct: 348 --------------RPNEVTLVGVISACAQLGSDELVEQIGNYAENQRLPLTSYLGSALI 393
Query: 330 HFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSA 389
Y CG + AR F + + +WN++I G NG ED
Sbjct: 394 DMYTRCGHVGRARSVFSRMEQKGVITWNSMIRGLAMNGFAED------------------ 435
Query: 390 MISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG-RWAHEYVLNN 448
A+ L+ M + GV+PNEIT V++ A +G + +G + E +
Sbjct: 436 -------------AISLYEKMAENGVQPNEITFVALLAACTHAGLVDQGMAFFEEMKREH 482
Query: 449 SITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANL 505
++ A I+D+ K G + A++ + +V W ++ H D L
Sbjct: 483 LVSPQVEHCACIVDLLCKSGGLWEAYKFICDMEVEPNAVI-WTTLLSSCRAHADVEL 538
>gi|449440359|ref|XP_004137952.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g37310-like [Cucumis sativus]
Length = 595
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 180/646 (27%), Positives = 328/646 (50%), Gaps = 81/646 (12%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
+++C+ H+ G+Q+H+ + S + + F+ + LI+ Y+K
Sbjct: 10 IQHCTDHLFFRVGKQLHARLVLSSVVPDNFLGSKLISFYSK------------------- 50
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDM--- 146
SG IR DA VF K P K S+ ++++ + ++ + L++F +
Sbjct: 51 -------SGSIR-----DAYNVFGKIPRKNIFSWNALLISYTLHNMHTDLLKLFSSLVNS 98
Query: 147 RILGVIPNEVT-------LASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNM 199
V P+ T LAS+ S+S G+ + +H +++ ++ + + L+
Sbjct: 99 NSTDVKPDRFTVTCALKALASLFSNS----GL--AKEVHSFILRRGLEYDIFVVNALITF 152
Query: 200 YCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMI 259
Y C LV LAR +F+R+P +D+VSW M+
Sbjct: 153 YSRCDELV-------------------------------LARIMFDRMPERDIVSWNAML 181
Query: 260 DGYLQVERLSEALTMYRAMLCD-GIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGF 318
GY Q + ++R ML + PN + V ++ AC ++ G+++H + ++
Sbjct: 182 AGYSQGGSYEKCKELFRVMLSSLEVKPNALTAVSVLQACAQSNDLIFGIEVHRFVNESQI 241
Query: 319 DCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNN 378
+ +I YA CG ++ AR FE ++ ++ ++I+G++ +G + A LF
Sbjct: 242 KMDVSLWNAVIGLYAKCGSLDYARELFEEMLEKDAITYCSMISGYMVHGFVNQAMDLFRE 301
Query: 379 MQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG 438
++ + +W+A+ISG QN + A+++F M G +PN +T+ S+ + TLK G
Sbjct: 302 QERPRLPTWNAVISGLVQNNRQEGAVDIFRAMQSHGCRPNTVTLASILPVFSHFSTLKGG 361
Query: 439 RWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLA 498
+ H Y + N+ N ++ AIID YAKCG ++ A VF I+ R S+ W +II A
Sbjct: 362 KEIHGYAIRNTYDRNIYVATAIIDSYAKCGYLHGAQLVFDQIKGR--SLIAWTSIISAYA 419
Query: 499 MHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDL 558
+HGDAN+ L ++ ++ I+ + +TF VL+ C H+G +D + F + Y ++P +
Sbjct: 420 VHGDANVALSLFYEMLTNGIQPDQVTFTSVLAACAHSGELDEAWKIFNVLLPEYGIQPLV 479
Query: 559 KHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAG 618
+HY CMV +L RAG+L DA E I MP++ +WG LL + + G+VE+G+ L
Sbjct: 480 EHYACMVGVLSRAGKLSDAVEFISKMPLEPTAKVWGALLNGASVAGDVELGKYVFDRLFE 539
Query: 619 LQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
++P + + V+++N+Y+ +GRW+DA +IR M++ +K++PG S +
Sbjct: 540 IEPENTGNYVIMANLYSQSGRWKDADTIRDLMKEVRLKKIPGNSWI 585
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 128/515 (24%), Positives = 230/515 (44%), Gaps = 70/515 (13%)
Query: 3 LDHFHSVFNSQKANLQNSDYELALVSALRYCSAHIAVSQ-GQQIHSLIFKSGLESNTFIQ 61
L F S+ NS +++ + + AL+ ++ + S +++HS I + GLE + F+
Sbjct: 89 LKLFSSLVNSNSTDVKPDRF--TVTCALKALASLFSNSGLAKEVHSFILRRGLEYDIFVV 146
Query: 62 NSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCV 121
N+LI Y++C + A+ MFD D V+ N M++GY
Sbjct: 147 NALITFYSRCDELVLARIMFDRMPERDIVSWNAMLAGY---------------------- 184
Query: 122 SYTSMIMGFAQNDCWREALEVFRDM-RILGVIPNEVTLASVISSSVHLGGIWECRMLHGL 180
+Q + + E+FR M L V PN +T SV+ + + +H
Sbjct: 185 ---------SQGGSYEKCKELFRVMLSSLEVKPNALTAVSVLQACAQSNDLIFGIEVHRF 235
Query: 181 VIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELA 240
V + I V + ++ +Y C SL AR LF+EM E++ +++ M++G+ G V A
Sbjct: 236 VNESQIKMDVSLWNAVIGLYAKCGSLDYARELFEEMLEKDAITYCSMISGYMVHGFVNQA 295
Query: 241 RELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRA 300
+LF + +W +I G +Q R A+ ++RAM G PN V + ++
Sbjct: 296 MDLFREQERPRLPTWNAVISGLVQNNRQEGAVDIFRAMQSHGCRPNTVTLASILPVFSHF 355
Query: 301 MAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALI 360
G +IH ++ +D ++ II YA CG ++ A+L
Sbjct: 356 STLKGGKEIHGYAIRNTYDRNIYVATAIIDSYAKCGYLHGAQL----------------- 398
Query: 361 AGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEI 420
+F+ ++ R + +W+++IS YA + N+AL LF+ M+ G++P+++
Sbjct: 399 --------------VFDQIKGRSLIAWTSIISAYAVHGDANVALSLFYEMLTNGIQPDQV 444
Query: 421 TMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLS--AAIIDMYAKCGSINTAFEVFY 478
T SV A A SG L E W VL + + A ++ + ++ G ++ A E
Sbjct: 445 TFTSVLAACAHSGELDEA-WKIFNVLLPEYGIQPLVEHYACMVGVLSRAGKLSDAVEFIS 503
Query: 479 HIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDL 513
+ T+ W A++ G ++ GD L ++ L
Sbjct: 504 KMPLEPTA-KVWGALLNGASVAGDVELGKYVFDRL 537
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 70/319 (21%), Positives = 138/319 (43%), Gaps = 40/319 (12%)
Query: 293 LISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDH 352
LI C + F G Q+H+ +V + +F+ + +I FY+ G I A F + +
Sbjct: 9 LIQHCTDHLFFRVGKQLHARLVLSSVVPDNFLGSKLISFYSKSGSIRDAYNVFGKIPRKN 68
Query: 353 IASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVD 412
I SWNAL+ + + M D +LF+++ +
Sbjct: 69 IFSWNALLISYTLHNMHTDLLKLFSSLVNSN----------------------------S 100
Query: 413 AGVKPNEITMVSVFCAIAS----SGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCG 468
VKP+ T+ A+AS SG KE H ++L + + + A+I Y++C
Sbjct: 101 TDVKPDRFTVTCALKALASLFSNSGLAKE---VHSFILRRGLEYDIFVVNALITFYSRCD 157
Query: 469 SINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSD-LEKRNIKLNSITFIG 527
+ A +F + +R + WNA++ G + G +++ L +K N++T +
Sbjct: 158 ELVLARIMFDRMPER--DIVSWNAMLAGYSQGGSYEKCKELFRVMLSSLEVKPNALTAVS 215
Query: 528 VLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMK 587
VL C + + G + + ++ D+ + ++ L + G L+ A E+ M ++
Sbjct: 216 VLQACAQSNDLIFGIEVHRFVNES-QIKMDVSLWNAVIGLYAKCGSLDYARELFEEM-LE 273
Query: 588 ADVVIWGTLLAASRIHGNV 606
D + + ++++ +HG V
Sbjct: 274 KDAITYCSMISGYMVHGFV 292
>gi|297832866|ref|XP_002884315.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330155|gb|EFH60574.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 861
Score = 307 bits (786), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 195/641 (30%), Positives = 315/641 (49%), Gaps = 83/641 (12%)
Query: 28 SALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTL 87
S LR C+A + G Q+H+ KS ++ ++ + +++YAKC
Sbjct: 244 SVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKC---------------- 287
Query: 88 DPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMR 147
D + DA+ +FDK+ SY +MI G++Q + +AL +F +
Sbjct: 288 ---------------DNMQDAQILFDKSENLNRQSYNAMITGYSQEEHGFKALLLFHRLM 332
Query: 148 ILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLV 207
G+ +E++L+ V + + G+ E ++ L IK + V ++ ++MY C +L
Sbjct: 333 SSGLGFDEISLSGVFRACALVKGLSEGLQIYDLAIKSSLSLDVCVANAAIDMYGKCQALA 392
Query: 208 EARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVER 267
EA +FDEM+ R D VSW +I + Q +
Sbjct: 393 EAFRVFDEMRRR-------------------------------DAVSWNAIIAAHEQNGK 421
Query: 268 LSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQAT 327
E L ++ +ML I P++ ++ AC + G G++IHS IVK+G + +
Sbjct: 422 GYETLFLFVSMLRSRIEPDEFTFGSVLKACTGG-SLGYGMEIHSSIVKSGMASNSSVGCS 480
Query: 328 IIHFYAACGRINLA-RLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYS 386
+I Y+ CG I A ++ + +++ G +E+ ++ N + S
Sbjct: 481 LIDMYSKCGMIEEAEKIHSRFFQRTNVS------------GTMEELEKMHNKRLQEMCVS 528
Query: 387 WSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVL 446
W+++ISGY EQ A LF M++ G+ P++ T +V A+ + G+ H V+
Sbjct: 529 WNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVI 588
Query: 447 NNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHI--RDRTTSVSPWNAIICGLAMHGDAN 504
+ + +S+ ++DMY+KCG ++ + +F RD T WNA+ICG A HG
Sbjct: 589 KKELQSDVYISSTLVDMYSKCGDLHDSRLMFEKSLRRDFVT----WNAMICGYAHHGKGE 644
Query: 505 LTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCM 564
++++ + NIK N +TFI +L C H GL+D G YF MK Y ++P L HY M
Sbjct: 645 EAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNM 704
Query: 565 VDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIH-GNVEVGERAAKSLAGLQPSH 623
VD+LG++G+++ A E+IR MP +AD VIW TLL IH NVEV E A +L L P
Sbjct: 705 VDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQD 764
Query: 624 GPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
+ LLSN+YADAG WE +R+ MR +K+ PG S V
Sbjct: 765 SSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWV 805
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 151/572 (26%), Positives = 262/572 (45%), Gaps = 70/572 (12%)
Query: 33 CSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVAC 92
C+ A+ G+Q H+ + SG TF+ N L+ +Y A +FD D V+
Sbjct: 16 CAKQGALELGKQAHAHMILSGFRPTTFVLNCLLQVYTNSRDFVSASMVFDRMPLRDVVSW 75
Query: 93 NIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVI 152
N MI+GY +++ + A F+ P++ VS+ SM+ G+ QN +++EVF DM G
Sbjct: 76 NKMINGYAKSNNMVKASFFFNMMPVRDVVSWNSMLSGYLQNGETLKSIEVFVDMGRAGTE 135
Query: 153 PNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSL 212
+ T A ++ L +HG+V+++ D V+ ++ LL+MY VE+ +
Sbjct: 136 FDGRTFAIILKVCSCLEDTSLGMQIHGVVVRVGCDTDVVAASALLDMYAKGKRFVESLRV 195
Query: 213 FDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEAL 272
F + E+N VSW+ ++ G + L+ LA + F+ + V+ G Y V R AL
Sbjct: 196 FQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQK---VNAGVSQSIYASVLRSCAAL 252
Query: 273 TMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFY 332
+ R G Q+H+ +K+ F ++ + Y
Sbjct: 253 SELRL----------------------------GGQLHAHALKSDFAADGIVRTATLDMY 284
Query: 333 AACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMIS 392
A C + A++ F+ N+ ++ S++AMI+
Sbjct: 285 AKCDNMQDAQILFDKS----------------------------ENLNRQ---SYNAMIT 313
Query: 393 GYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITL 452
GY+Q E AL LFH ++ +G+ +EI++ VF A A L EG ++ + +S++L
Sbjct: 314 GYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYDLAIKSSLSL 373
Query: 453 NDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSD 512
+ ++ A IDMY KC ++ AF VF +R R +VS WNAII +G TL ++
Sbjct: 374 DVCVANAAIDMYGKCQALAEAFRVFDEMR-RRDAVS-WNAIIAAHEQNGKGYETLFLFVS 431
Query: 513 LEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGC-MVDLLGRA 571
+ + I+ + TF VL C L E + +KS + GC ++D+ +
Sbjct: 432 MLRSRIEPDEFTFGSVLKACTGGSLGYGMEIHSSIVKSGMASNSSV---GCSLIDMYSKC 488
Query: 572 GQLEDAEEVIRSMPMKADVVIWGTLLAASRIH 603
G +E+AE++ + +V GT+ ++H
Sbjct: 489 GMIEEAEKIHSRFFQRTNVS--GTMEELEKMH 518
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 137/616 (22%), Positives = 246/616 (39%), Gaps = 120/616 (19%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
L+ CS S G QIH ++ + G +++ ++L+++YAK
Sbjct: 145 LKVCSCLEDTSLGMQIHGVVVRVGCDTDVVAASALLDMYAK------------------- 185
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
R ++ VF P K VS++++I G QN+ AL+ F++M+ +
Sbjct: 186 ------------GKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKV 233
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
++ ASV+ S L + LH +K I+ T L+MY C ++ +A
Sbjct: 234 NAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDA 293
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLS 269
+ LFD+ + N S+N MI GY Q E
Sbjct: 294 QILFDKSENLNRQSYN-------------------------------AMITGYSQEEHGF 322
Query: 270 EALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATII 329
+AL ++ ++ G+ +++ + + AC EGLQI+ + +K+ + I
Sbjct: 323 KALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYDLAIKSSLSLDVCVANAAI 382
Query: 330 HFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSA 389
Y C + A F+ + SWNA+IA +NG
Sbjct: 383 DMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNG---------------------- 420
Query: 390 MISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNS 449
GY L LF M+ + ++P+E T SV A + G+L G H ++ +
Sbjct: 421 --KGYE-------TLFLFVSMLRSRIEPDEFTFGSVLKA-CTGGSLGYGMEIHSSIVKSG 470
Query: 450 ITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVS------------------PWN 491
+ N ++ ++IDMY+KCG I A ++ RT WN
Sbjct: 471 MASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRTNVSGTMEELEKMHNKRLQEMCVSWN 530
Query: 492 AIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSV 551
+II G M + +++ + + I + T+ VL TC + LG++ +
Sbjct: 531 SIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIK- 589
Query: 552 YNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGN----VE 607
++ D+ +VD+ + G L D+ ++ ++ D V W ++ HG ++
Sbjct: 590 KELQSDVYISSTLVDMYSKCGDLHDS-RLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQ 648
Query: 608 VGERAAKSLAGLQPSH 623
+ ER L ++P+H
Sbjct: 649 LFERMI--LENIKPNH 662
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 106/456 (23%), Positives = 197/456 (43%), Gaps = 77/456 (16%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E++L R C+ +S+G QI+ L KS L + + N+ I++Y KC +++A +FD
Sbjct: 340 EISLSGVFRACALVKGLSEGLQIYDLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFD 399
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
D V+ N +I+ + +N + G+ E L +
Sbjct: 400 EMRRRDAVSWNAIIAAHEQNGK------------------------GY-------ETLFL 428
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
F M + P+E T SV+ + G + +H ++K + + +L++MY
Sbjct: 429 FVSMLRSRIEPDEFTFGSVLKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSK 487
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
C + EA + +R VS G +E ++ + + VSW ++I GY
Sbjct: 488 CGMIEEAEKIHSRFFQRTNVS-----------GTMEELEKMHNKRLQEMCVSWNSIISGY 536
Query: 263 LQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD 322
+ E+ +A ++ M+ GI P+ ++ C + G G QIH+ ++K
Sbjct: 537 VMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDV 596
Query: 323 FIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKR 382
+I +T++ Y+ CG ++ +RL FE ++ +WNA+I G+ +G E+A QLF
Sbjct: 597 YISSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFER---- 652
Query: 383 DVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAH 442
M+ +KPN +T +S+ A A G + +G +
Sbjct: 653 ---------------------------MILENIKPNHVTFISILRACAHMGLIDKG-LEY 684
Query: 443 EYVLNNSITLNDNLS--AAIIDMYAKCGSINTAFEV 476
Y++ L+ L + ++D+ K G + A E+
Sbjct: 685 FYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALEL 720
>gi|356530157|ref|XP_003533650.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Glycine max]
Length = 711
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 189/571 (33%), Positives = 302/571 (52%), Gaps = 24/571 (4%)
Query: 96 ISGYIRNDRLNDAREVFDKTPI--KCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIP 153
I+ Y RN +L+ AR+VFD+TP+ + S+ +M+ + + REAL +F M
Sbjct: 29 IACYARNGQLDHARKVFDETPLPHRTVSSWNAMVAAYFEARQPREALLLFEKMPQR---- 84
Query: 154 NEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLF 213
N V+ +IS + G + E R V M D V+ T+++ Y + EA LF
Sbjct: 85 NTVSWNGLISGHIKNGMLSEARR----VFDTMPDRNVVSWTSMVRGYVRNGDVAEAERLF 140
Query: 214 DEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALT 273
M +N+VSW VML G + G V+ AR+LF+ +P KDVV+ MI GY + RL EA
Sbjct: 141 WHMPHKNVVSWTVMLGGLLQEGRVDDARKLFDMMPEKDVVAVTNMIGGYCEEGRLDEA-- 198
Query: 274 MYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYA 333
RA+ + N V ++S R ++ ++ + + ++ Y
Sbjct: 199 --RALFDEMPKRNVVTWTAMVSGYARNGKVDVARKLFEVMPERN----EVSWTAMLLGYT 252
Query: 334 ACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISG 393
GR+ A F+ + N +I GF NG ++ AR++F M++RD +WSAMI
Sbjct: 253 HSGRMREASSLFDAMPVKPVVVCNEMIMGFGLNGEVDKARRVFKGMKERDNGTWSAMIKV 312
Query: 394 YAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLN 453
Y + AL LF M G+ N +++SV S +L G+ H ++ + +
Sbjct: 313 YERKGYELEALGLFRRMQREGLALNFPSLISVLSVCVSLASLDHGKQVHAQLVRSEFDQD 372
Query: 454 DNLSAAIIDMYAKCGSINTAFEVF--YHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYS 511
+++ +I MY KCG++ A +VF + ++D V WN++I G + HG L ++
Sbjct: 373 LYVASVLITMYVKCGNLVRAKQVFNRFPLKD----VVMWNSMITGYSQHGLGEEALNVFH 428
Query: 512 DLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRA 571
D+ + + +TFIGVLS C ++G V G F++MK Y VEP ++HY C+VDLLGRA
Sbjct: 429 DMCSSGVPPDDVTFIGVLSACSYSGKVKEGLELFETMKCKYQVEPGIEHYACLVDLLGRA 488
Query: 572 GQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLS 631
Q+ +A +++ MPM+ D ++WG LL A R H +++ E A + LA L+P + VLLS
Sbjct: 489 DQVNEAMKLVEKMPMEPDAIVWGALLGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLS 548
Query: 632 NIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
N+YA GRW D +R++++ + +LPG S
Sbjct: 549 NMYAYKGRWRDVEVLREKIKARSVTKLPGCS 579
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 135/495 (27%), Positives = 246/495 (49%), Gaps = 52/495 (10%)
Query: 62 NSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCV 121
N+++ Y + +A +F+ + V+ N +ISG+I+N L++AR VFD P + V
Sbjct: 59 NAMVAAYFEARQPREALLLFEKMPQRNTVSWNGLISGHIKNGMLSEARRVFDTMPDRNVV 118
Query: 122 SYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLV 181
S+TSM+ G+ +N EA +F M V+ V L ++ G + + R L
Sbjct: 119 SWTSMVRGYVRNGDVAEAERLFWHMPHKNVVSWTVMLGGLLQE----GRVDDARKL---- 170
Query: 182 IKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELAR 241
+M + V+ TN++ YC L EAR+LFDEM +RN+V+W M++G+A+ G V++AR
Sbjct: 171 FDMMPEKDVVAVTNMIGGYCEEGRLDEARALFDEMPKRNVVTWTAMVSGYARNGKVDVAR 230
Query: 242 ELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIV--DLISACGR 299
+LFE +P ++ VSW M+ GY R+ EA +++ AM + + MI+ L +
Sbjct: 231 KLFEVMPERNEVSWTAMLLGYTHSGRMREASSLFDAMPVKPVVVCNEMIMGFGLNGEVDK 290
Query: 300 AMAFGEGLQ---------IHSIIVKAGFD-----CYDFIQ--------ATIIHFYAACGR 337
A +G++ + + + G++ + +Q ++I + C
Sbjct: 291 ARRVFKGMKERDNGTWSAMIKVYERKGYELEALGLFRRMQREGLALNFPSLISVLSVCVS 350
Query: 338 I-----------NLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYS 386
+ L R +F+ + ++AS LI +++ G + A+Q+FN +DV
Sbjct: 351 LASLDHGKQVHAQLVRSEFDQDL--YVAS--VLITMYVKCGNLVRAKQVFNRFPLKDVVM 406
Query: 387 WSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYV- 445
W++MI+GY+Q+ AL +FH M +GV P+++T + V A + SG +KEG E +
Sbjct: 407 WNSMITGYSQHGLGEEALNVFHDMCSSGVPPDDVTFIGVLSACSYSGKVKEGLELFETMK 466
Query: 446 LNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAII--CGLAMHGD- 502
+ A ++D+ + +N A ++ + ++ W A++ C M D
Sbjct: 467 CKYQVEPGIEHYACLVDLLGRADQVNEAMKLVEKMPMEPDAIV-WGALLGACRTHMKLDL 525
Query: 503 ANLTLKIYSDLEKRN 517
A + ++ + LE +N
Sbjct: 526 AEVAVEKLAQLEPKN 540
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/355 (25%), Positives = 165/355 (46%), Gaps = 51/355 (14%)
Query: 49 IFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDA 108
+F E + ++I Y + G + +A+++FD + V M+SGY RN +++ A
Sbjct: 170 LFDMMPEKDVVAVTNMIGGYCEEGRLDEARALFDEMPKRNVVTWTAMVSGYARNGKVDVA 229
Query: 109 REVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIP-NEVTLASVISSSVH 167
R++F+ P + VS+T+M++G+ + REA +F M + V+ NE+ + ++ V
Sbjct: 230 RKLFEVMPERNEVSWTAMLLGYTHSGRMREASSLFDAMPVKPVVVCNEMIMGFGLNGEVD 289
Query: 168 LG------------GIW------------ECRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
G W E L GL ++ +G + +L+++ VC
Sbjct: 290 KARRVFKGMKERDNGTWSAMIKVYERKGYELEAL-GLFRRMQREGLALNFPSLISVLSVC 348
Query: 204 SSLVE-----------ARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDV 252
SL RS FD+ ++ +V++ + K G + A+++F R P KDV
Sbjct: 349 VSLASLDHGKQVHAQLVRSEFDQ----DLYVASVLITMYVKCGNLVRAKQVFNRFPLKDV 404
Query: 253 VSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSI 312
V W +MI GY Q EAL ++ M G+ P+DV + ++SAC + EGL++
Sbjct: 405 VMWNSMITGYSQHGLGEEALNVFHDMCSSGVPPDDVTFIGVLSACSYSGKVKEGLELFET 464
Query: 313 I-----VKAGFDCYDFIQATIIHFYAACGRINLA-RLQFELGIKDHIASWNALIA 361
+ V+ G + Y A ++ ++N A +L ++ ++ W AL+
Sbjct: 465 MKCKYQVEPGIEHY----ACLVDLLGRADQVNEAMKLVEKMPMEPDAIVWGALLG 515
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 107/232 (46%), Gaps = 36/232 (15%)
Query: 25 ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSC 84
+L+S L C + ++ G+Q+H+ + +S + + ++ + LI +Y KCG + +AK
Sbjct: 340 SLISVLSVCVSLASLDHGKQVHAQLVRSEFDQDLYVASVLITMYVKCGNLVRAK------ 393
Query: 85 STLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFR 144
+VF++ P+K V + SMI G++Q+ EAL VF
Sbjct: 394 -------------------------QVFNRFPLKDVVMWNSMITGYSQHGLGEEALNVFH 428
Query: 145 DMRILGVIPNEVTLASVISSSVHLGGIWE-CRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
DM GV P++VT V+S+ + G + E + + K ++ + L+++
Sbjct: 429 DMCSSGVPPDDVTFIGVLSACSYSGKVKEGLELFETMKCKYQVEPGIEHYACLVDLLGRA 488
Query: 204 SSLVEARSLFDEMK-ERNIVSWNVMLNG---FAKAGLVELARELFERIPSKD 251
+ EA L ++M E + + W +L K L E+A E ++ K+
Sbjct: 489 DQVNEAMKLVEKMPMEPDAIVWGALLGACRTHMKLDLAEVAVEKLAQLEPKN 540
>gi|224064340|ref|XP_002301427.1| predicted protein [Populus trichocarpa]
gi|222843153|gb|EEE80700.1| predicted protein [Populus trichocarpa]
Length = 442
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 162/387 (41%), Positives = 237/387 (61%), Gaps = 4/387 (1%)
Query: 278 MLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGR 337
ML G PN++ L AC + G IH+ +K+GFD + ++ YA G
Sbjct: 1 MLLKGCPPNELTFTFLFPACASFYSLLHGKVIHTHFIKSGFDFDVYALTALVDMYAKLGV 60
Query: 338 INLARLQF-ELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQ 396
+ LAR F E+ ++D I +WN+LIAG+ R+G +E A +LF M R V SW+ MISGY+Q
Sbjct: 61 LMLARQVFDEMTVRD-IPTWNSLIAGYSRSGDMEGALELFKLMPSRSVVSWTTMISGYSQ 119
Query: 397 NEQPNMALELFHGM-VDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDN 455
N ALE+F M D V+PNE+T+ SVF A A G L+ G Y +N + N
Sbjct: 120 NGMYTKALEMFLKMEKDKEVRPNEVTIASVFSACAKLGALEVGERIESYARDNGLMKNLY 179
Query: 456 LSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEK 515
+S +++MYA+CG I+ A VF I R S WN+++ GLA+HG +N L++Y +
Sbjct: 180 VSNTLLEMYARCGKIDAARHVFNEIGKRRNLCS-WNSMMMGLAVHGRSNEALQLYDQMLG 238
Query: 516 RNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLE 575
I+ + +TF+G++ C H GLV G + F+SM++ +++ P L+HYGCMVDLLGRAG+L+
Sbjct: 239 EGIEPDDVTFVGLILACTHGGLVAKGWQLFQSMETNFSIVPKLEHYGCMVDLLGRAGELQ 298
Query: 576 DAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYA 635
+A ++++SMPMK D VIWGTLL A H NVE E AA+SL ++P + + V+L NIYA
Sbjct: 299 EAYDLVKSMPMKPDSVIWGTLLGACSFHSNVEFAEIAAESLFQVEPWNPGNYVILCNIYA 358
Query: 636 DAGRWEDAFSIRKEMRDCGMKRLPGFS 662
A RW+ +RK M+ + + G+S
Sbjct: 359 SAQRWDGVAKLRKLMKGGQITKAAGYS 385
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 100/363 (27%), Positives = 174/363 (47%), Gaps = 35/363 (9%)
Query: 146 MRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSS 205
M + G PNE+T + + + +++H IK D V T L++MY
Sbjct: 1 MLLKGCPPNELTFTFLFPACASFYSLLHGKVIHTHFIKSGFDFDVYALTALVDMYAKLGV 60
Query: 206 LVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQV 265
L+ AR +FDEM R+I +WN ++ G++++G +E A ELF+ +PS+ VVSW TMI GY Q
Sbjct: 61 LMLARQVFDEMTVRDIPTWNSLIAGYSRSGDMEGALELFKLMPSRSVVSWTTMISGYSQN 120
Query: 266 ERLSEALTMYRAMLCDG-IAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFI 324
++AL M+ M D + PN+V I + SAC + A G +I S G ++
Sbjct: 121 GMYTKALEMFLKMEKDKEVRPNEVTIASVFSACAKLGALEVGERIESYARDNGLMKNLYV 180
Query: 325 QATIIHFYAACGRINLARLQF-ELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRD 383
T++ YA CG+I+ AR F E+G + ++ SWN+++ G +G
Sbjct: 181 SNTLLEMYARCGKIDAARHVFNEIGKRRNLCSWNSMMMGLAVHG---------------- 224
Query: 384 VYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHE 443
+ N AL+L+ M+ G++P+++T V + A G + +G +
Sbjct: 225 ---------------RSNEALQLYDQMLGEGIEPDDVTFVGLILACTHGGLVAKGWQLFQ 269
Query: 444 YVLNN-SITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGD 502
+ N SI ++D+ + G + A+++ + + SV W ++ + H +
Sbjct: 270 SMETNFSIVPKLEHYGCMVDLLGRAGELQEAYDLVKSMPMKPDSVI-WGTLLGACSFHSN 328
Query: 503 ANL 505
Sbjct: 329 VEF 331
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 91/289 (31%), Positives = 142/289 (49%), Gaps = 33/289 (11%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
EL C++ ++ G+ IH+ KSG + + + +L+++YAK G++ A+ +FD
Sbjct: 10 ELTFTFLFPACASFYSLLHGKVIHTHFIKSGFDFDVYALTALVDMYAKLGVLMLARQVFD 69
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+ D N +I+GY R+ + A E+F P + VS+T+MI G++QN + +ALE+
Sbjct: 70 EMTVRDIPTWNSLIAGYSRSGDMEGALELFKLMPSRSVVSWTTMISGYSQNGMYTKALEM 129
Query: 143 FRDM-RILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYC 201
F M + V PNEVT+ASV S+ LG + + + + +S LL MY
Sbjct: 130 FLKMEKDKEVRPNEVTIASVFSACAKLGALEVGERIESYARDNGLMKNLYVSNTLLEMYA 189
Query: 202 VCSSLVEARSLFDEM-KERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMID 260
C + AR +F+E+ K RN+ SWN M+ G A G
Sbjct: 190 RCGKIDAARHVFNEIGKRRNLCSWNSMMMGLAVHG------------------------- 224
Query: 261 GYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQI 309
R +EAL +Y ML +GI P+DV V LI AC +G Q+
Sbjct: 225 ------RSNEALQLYDQMLGEGIEPDDVTFVGLILACTHGGLVAKGWQL 267
>gi|357508385|ref|XP_003624481.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240699|gb|ABD32557.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355499496|gb|AES80699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 672
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 188/562 (33%), Positives = 291/562 (51%), Gaps = 79/562 (14%)
Query: 113 DKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIW 172
DKT + S+ S+I FA++ +AL F MR L + PN T I S L +
Sbjct: 47 DKTSV---YSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSSLYDLC 103
Query: 173 ECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFA 232
+ +H + +++ L++MY +
Sbjct: 104 AGKQIHQQAFVFGYGSDIFVASALIDMY-------------------------------S 132
Query: 233 KAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLC------DGIAP- 285
K G + AR+LF+ IP ++VVSW +MI GY+Q ER EA+ +++ L D I
Sbjct: 133 KCGYLNDARKLFDEIPERNVVSWTSMISGYVQNERAREAVFLFKEFLLVDETDYDEIVGV 192
Query: 286 ----NDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLA 341
+ V++ +ISAC R +H + VK GF+ + T++ YA CG I+++
Sbjct: 193 GVGVDSVLLGCVISACARVCVKSVTECVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVS 252
Query: 342 RLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPN 401
R++F+ M++ DV SW+++I+ YAQN
Sbjct: 253 -------------------------------RKVFDGMEETDVCSWNSLIAVYAQNGLSV 281
Query: 402 MALELFHGMVDAG-VKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAI 460
A LF MV G V+ N +T+ +V A A SG L+ G+ H+ V+ + N + +I
Sbjct: 282 EAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKMELEDNLVVGTSI 341
Query: 461 IDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKL 520
+DMY KCG + A + F ++ + +V W ++ G MHG +K++ ++ + IK
Sbjct: 342 VDMYCKCGRVEMARKAFDRLKRK--NVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCGIKP 399
Query: 521 NSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEV 580
N ITF+ VL+ C HAGL+ G +F MK ++VEP ++HY CMVDLLGRAG L++A +
Sbjct: 400 NYITFVSVLAACSHAGLLKEGWHWFNKMKCEFDVEPGIEHYSCMVDLLGRAGYLKEAYGL 459
Query: 581 IRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRW 640
I+ M +K D ++WG+LL A RIH NVE+GE +A+ L L PS+ VLLSNIYADAGRW
Sbjct: 460 IQEMKVKPDFIVWGSLLGACRIHKNVELGEISARKLFKLDPSNCGYYVLLSNIYADAGRW 519
Query: 641 EDAFSIRKEMRDCGMKRLPGFS 662
+D +R M++ G+ + PG+S
Sbjct: 520 DDVERMRILMKNHGLLKTPGYS 541
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 112/480 (23%), Positives = 207/480 (43%), Gaps = 87/480 (18%)
Query: 29 ALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLD 88
++ CS+ + G+QIH F G S+ F+ ++LI++Y+KCG ++ A+ +FD +
Sbjct: 92 TIKSCSSLYDLCAGKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERN 151
Query: 89 PVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRI 148
V+ MISGY++N+R +A +F + + Y ++ D
Sbjct: 152 VVSWTSMISGYVQNERAREAVFLFKEFLLVDETDYDEIVGVGVGVD-------------- 197
Query: 149 LGVIPNEVTLASVIS--SSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSL 206
V L VIS + V + + EC +HGL +K +G + + L++ Y C +
Sbjct: 198 ------SVLLGCVISACARVCVKSVTEC--VHGLAVKKGFEGCLAVGNTLMDAYAKCGEI 249
Query: 207 VEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVE 266
+R +FD M+E ++ SWN ++ +A+ GL A LF D+V G
Sbjct: 250 SVSRKVFDGMEETDVCSWNSLIAVYAQNGLSVEAFSLFS-----DMVKRGE--------- 295
Query: 267 RLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQA 326
+ N V + ++ AC + A G IH +VK + +
Sbjct: 296 ----------------VRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKMELEDNLVVGT 339
Query: 327 TIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYS 386
+I+ Y CGR+ +AR F+ + ++ SW ++AG
Sbjct: 340 SIVDMYCKCGRVEMARKAFDRLKRKNVKSWTVMVAG------------------------ 375
Query: 387 WSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG-RWAHEYV 445
Y + A+++F+ M+ G+KPN IT VSV A + +G LKEG W ++
Sbjct: 376 -------YGMHGHGKEAMKVFYEMIRCGIKPNYITFVSVLAACSHAGLLKEGWHWFNKMK 428
Query: 446 LNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANL 505
+ + ++D+ + G + A+ + ++ + + W +++ +H + L
Sbjct: 429 CEFDVEPGIEHYSCMVDLLGRAGYLKEAYGLIQEMKVKPDFI-VWGSLLGACRIHKNVEL 487
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 101/236 (42%), Gaps = 45/236 (19%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+ L + L C+ A+ G+ IH + K LE N + S++++Y KCG + A+ FD
Sbjct: 301 VTLSAVLLACAHSGALQIGKCIHDQVVKMELEDNLVVGTSIVDMYCKCGRVEMARKAFDR 360
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
+ + +M++GY + +EA++VF
Sbjct: 361 LKRKNVKSWTVMVAGY-------------------------------GMHGHGKEAMKVF 389
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGI-----WECRMLHGLVIKLMIDGFVIISTNLLN 198
+M G+ PN +T SV+++ H G + W +M ++ I+ + + +++
Sbjct: 390 YEMIRCGIKPNYITFVSVLAACSHAGLLKEGWHWFNKMKCEFDVEPGIEHY----SCMVD 445
Query: 199 MYCVCSSLVEARSLFDEMKER-NIVSWNVMLNGFAKAGLVEL----ARELFERIPS 249
+ L EA L EMK + + + W +L VEL AR+LF+ PS
Sbjct: 446 LLGRAGYLKEAYGLIQEMKVKPDFIVWGSLLGACRIHKNVELGEISARKLFKLDPS 501
>gi|298205062|emb|CBI38358.3| unnamed protein product [Vitis vinifera]
Length = 549
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 171/466 (36%), Positives = 264/466 (56%), Gaps = 38/466 (8%)
Query: 234 AGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDL 293
AG ++ A+ +F++IP + + ++I GY + +A+ ++R M+C G++PN+ + +
Sbjct: 35 AGDLQYAQRMFDQIPQPNKFMYNSLIRGYSNSDDPIDAVLLFRRMICSGLSPNEFTLPFV 94
Query: 294 ISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKD-- 351
+ ACG A+ E + +H + +K G F+Q +I Y CG I+ AR F+ I D
Sbjct: 95 LKACGCKSAYWEAVLVHGLAIKLGIGSLVFVQNALIAVYVVCGLIHCARKLFD-DITDKT 153
Query: 352 ---------------------------------HIASWNALIAGFIRNGMIEDARQLFNN 378
++ SW ++I+ + ++G IE ARQ+F+
Sbjct: 154 LIDIIVRNALVDMYAKCGNLHSAQAIFDRTQEKNVVSWTSMISAYAQHGSIEVARQIFDQ 213
Query: 379 MQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG 438
M ++V SW++MIS Y + Q AL+LF+ M ++ V P+E T+VS+ A + G L G
Sbjct: 214 MPGKNVVSWNSMISCYLREGQYREALDLFNKMRNSRVVPDEATLVSILAACSQLGDLVMG 273
Query: 439 RWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLA 498
+ H Y+L+N L ++IDMYAKCG + TA ++F + + ++ WN II LA
Sbjct: 274 KKIHNYILSNKGAYGVTLYNSLIDMYAKCGPVVTALDIFLEMPGK--NLVSWNVIIGALA 331
Query: 499 MHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDL 558
+HG +K++ +++ + IT G+LS C H+GLVD+G YF M +Y V ++
Sbjct: 332 LHGCGLEAIKLFEEMQADGTLPDEITLTGLLSACSHSGLVDMGLYYFDRMGVIYRVPREI 391
Query: 559 KHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAG 618
+HY CMVDLLGR G L +A E+I MPMK DVV+WG LL A RIHGNVE+G++ K L
Sbjct: 392 EHYACMVDLLGRGGLLGEAIELIGRMPMKPDVVVWGALLGACRIHGNVEIGKQILKQLLE 451
Query: 619 LQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
L+P G VL+SNIY +A RWED IRK M D G+K+ S +
Sbjct: 452 LEPHSGGLYVLISNIYWEAQRWEDVKKIRKLMIDRGIKKGRAISSI 497
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 102/358 (28%), Positives = 172/358 (48%), Gaps = 46/358 (12%)
Query: 105 LNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISS 164
L A+ +FD+ P Y S+I G++ +D +A+ +FR M G+ PNE TL V+ +
Sbjct: 38 LQYAQRMFDQIPQPNKFMYNSLIRGYSNSDDPIDAVLLFRRMICSGLSPNEFTLPFVLKA 97
Query: 165 SVHLGGIWECRMLHGLVIKLMIDGFV---------------------------------- 190
WE ++HGL IKL I V
Sbjct: 98 CGCKSAYWEAVLVHGLAIKLGIGSLVFVQNALIAVYVVCGLIHCARKLFDDITDKTLIDI 157
Query: 191 IISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSK 250
I+ L++MY C +L A+++FD +E+N+VSW M++ +A+ G +E+AR++F+++P K
Sbjct: 158 IVRNALVDMYAKCGNLHSAQAIFDRTQEKNVVSWTSMISAYAQHGSIEVARQIFDQMPGK 217
Query: 251 DVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIH 310
+VVSW +MI YL+ + EAL ++ M + P++ +V +++AC + G +IH
Sbjct: 218 NVVSWNSMISCYLREGQYREALDLFNKMRNSRVVPDEATLVSILAACSQLGDLVMGKKIH 277
Query: 311 SIIVK----AGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRN 366
+ I+ G Y+ ++I YA CG + A F ++ SWN +I +
Sbjct: 278 NYILSNKGAYGVTLYN----SLIDMYAKCGPVVTALDIFLEMPGKNLVSWNVIIGALALH 333
Query: 367 GMIEDARQLFNNMQK----RDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEI 420
G +A +LF MQ D + + ++S + + +M L F M P EI
Sbjct: 334 GCGLEAIKLFEEMQADGTLPDEITLTGLLSACSHSGLVDMGLYYFDRMGVIYRVPREI 391
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 108/447 (24%), Positives = 188/447 (42%), Gaps = 92/447 (20%)
Query: 20 SDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLI-------------- 65
S E L L+ C A + +H L K G+ S F+QN+LI
Sbjct: 85 SPNEFTLPFVLKACGCKSAYWEAVLVHGLAIKLGIGSLVFVQNALIAVYVVCGLIHCARK 144
Query: 66 --------------------NLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRL 105
++YAKCG + A+++FD + V+ MIS Y ++ +
Sbjct: 145 LFDDITDKTLIDIIVRNALVDMYAKCGNLHSAQAIFDRTQEKNVVSWTSMISAYAQHGSI 204
Query: 106 NDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSS 165
AR++FD+ P K VS+ SMI + + +REAL++F MR V+P+E TL S++++
Sbjct: 205 EVARQIFDQMPGKNVVSWNSMISCYLREGQYREALDLFNKMRNSRVVPDEATLVSILAAC 264
Query: 166 VHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWN 225
LG + + +H ++ V + +L++MY C +V A +F EM +N+VSWN
Sbjct: 265 SQLGDLVMGKKIHNYILSNKGAYGVTLYNSLIDMYAKCGPVVTALDIFLEMPGKNLVSWN 324
Query: 226 VMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAP 285
V++ A G EA+ ++ M DG P
Sbjct: 325 VIIGALALHGCG-------------------------------LEAIKLFEEMQADGTLP 353
Query: 286 NDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD------FIQATIIHFYAACGRIN 339
+++ + L+SAC HS +V G +D + I H+ +
Sbjct: 354 DEITLTGLLSACS-----------HSGLVDMGLYYFDRMGVIYRVPREIEHYACMVDLLG 402
Query: 340 LARLQFE-------LGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWS--AM 390
L E + +K + W AL+ +G +E +Q+ + + + +S +
Sbjct: 403 RGGLLGEAIELIGRMPMKPDVVVWGALLGACRIHGNVEIGKQILKQLLELEPHSGGLYVL 462
Query: 391 ISG-YAQNEQPNMALELFHGMVDAGVK 416
IS Y + ++ ++ M+D G+K
Sbjct: 463 ISNIYWEAQRWEDVKKIRKLMIDRGIK 489
>gi|224065851|ref|XP_002301973.1| predicted protein [Populus trichocarpa]
gi|222843699|gb|EEE81246.1| predicted protein [Populus trichocarpa]
Length = 716
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 179/554 (32%), Positives = 303/554 (54%), Gaps = 12/554 (2%)
Query: 117 IKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRM 176
+K +S I F++ + + + VF M G++P+ L +VI + L + +
Sbjct: 36 LKTGISLPETIQIFSKLNHFGHVIRVFSYMLTQGIVPDSRVLPTVIKTCAALSALQTGKQ 95
Query: 177 LH--GLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKA 234
+H LV L +D V+ ++LL+MY L +AR++FD++ + +V+ + +++ FA+
Sbjct: 96 MHCFALVSGLGLDSVVL--SSLLHMYVQFDHLKDARNVFDKLPQPGVVTSSALISRFARK 153
Query: 235 GLVELARELFERIPSKDV----VSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMI 290
G V+ +ELF + V VSW MI G+ + +A+ M++ M +G+ P+ +
Sbjct: 154 GRVKETKELFYQTRDLGVELNLVSWNGMISGFNRSGSYLDAVLMFQNMHLEGLKPDGTSV 213
Query: 291 VDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIK 350
++ A G G+QIH ++K G F+ + +I Y C + F +
Sbjct: 214 SSVLPAVGDLDMPLMGIQIHCYVIKQGLGPDKFVVSALIDMYGKCACASEMSGVFNEMDE 273
Query: 351 DHIASWNALIAGFIRNGMIEDARQLFNNMQKRD--VYSWSAMISGYAQNEQPNMALELFH 408
+ + NAL+ G RNG++++A ++F + D V SW++MI+ +QN + ALELF
Sbjct: 274 VDVGACNALVTGLSRNGLVDNALEVFKQFKGMDLNVVSWTSMIASCSQNGKDMEALELFR 333
Query: 409 GMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCG 468
M GVKPN +T+ + A + L G+ AH + L N I + + +A+IDMYAKCG
Sbjct: 334 EMQIEGVKPNSVTIPCLLPACGNIAALLHGKAAHCFSLRNGIFNDVYVGSALIDMYAKCG 393
Query: 469 SINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGV 528
+ + F + +R ++ WN+++ G AMHG + I+ +++ K + ++F V
Sbjct: 394 RMLASRLCFDMMPNR--NLVSWNSLMAGYAMHGKTFEAINIFELMQRCGQKPDHVSFTCV 451
Query: 529 LSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKA 588
LS C GL + G YF SM + VE ++HY CMV LLGR+G+LE+A +I+ MP +
Sbjct: 452 LSACTQGGLTEEGWFYFDSMSRNHGVEARMEHYSCMVTLLGRSGRLEEAYAMIKQMPFEP 511
Query: 589 DVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRK 648
D +WG LL++ R+H V++GE AAK + L+P + + +LLSNIYA W + +R
Sbjct: 512 DSCVWGALLSSCRVHNRVDLGEIAAKRVFELEPRNPGNYILLSNIYASKAMWVEVDMVRD 571
Query: 649 EMRDCGMKRLPGFS 662
MR G+K+ PG+S
Sbjct: 572 MMRSRGLKKNPGYS 585
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 130/504 (25%), Positives = 242/504 (48%), Gaps = 46/504 (9%)
Query: 26 LVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCS 85
L + ++ C+A A+ G+Q+H SGL ++ + +SL+++Y + + A+++FD
Sbjct: 77 LPTVIKTCAALSALQTGKQMHCFALVSGLGLDSVVLSSLLHMYVQFDHLKDARNVFDKLP 136
Query: 86 TLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCC----VSYTSMIMGFAQNDCWREALE 141
V + +IS + R R+ + +E+F +T VS+ MI GF ++ + +A+
Sbjct: 137 QPGVVTSSALISRFARKGRVKETKELFYQTRDLGVELNLVSWNGMISGFNRSGSYLDAVL 196
Query: 142 VFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIK--LMIDGFVIISTNLLNM 199
+F++M + G+ P+ +++SV+ + L +H VIK L D FV+ + L++M
Sbjct: 197 MFQNMHLEGLKPDGTSVSSVLPAVGDLDMPLMGIQIHCYVIKQGLGPDKFVV--SALIDM 254
Query: 200 YCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKD--VVSWGT 257
Y C+ E +F+EM E ++ + N ++ G ++ GLV+ A E+F++ D VVSW +
Sbjct: 255 YGKCACASEMSGVFNEMDEVDVGACNALVTGLSRNGLVDNALEVFKQFKGMDLNVVSWTS 314
Query: 258 MIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAG 317
MI Q + EAL ++R M +G+ PN V I L+ ACG A G H ++ G
Sbjct: 315 MIASCSQNGKDMEALELFREMQIEGVKPNSVTIPCLLPACGNIAALLHGKAAHCFSLRNG 374
Query: 318 FDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFN 377
++ + +I YA CGR+ +RL F++ ++ SWN+L+AG+ +G +A +F
Sbjct: 375 IFNDVYVGSALIDMYAKCGRMLASRLCFDMMPNRNLVSWNSLMAGYAMHGKTFEAINIFE 434
Query: 378 NMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKE 437
MQ+ G KP+ ++ V A G +E
Sbjct: 435 LMQR-------------------------------CGQKPDHVSFTCVLSACTQGGLTEE 463
Query: 438 GRWAHEYV-LNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICG 496
G + + + N+ + + ++ + + G + A+ + + S W A++
Sbjct: 464 GWFYFDSMSRNHGVEARMEHYSCMVTLLGRSGRLEEAYAMIKQMPFEPDSCV-WGALLSS 522
Query: 497 LAMHGDANL---TLKIYSDLEKRN 517
+H +L K +LE RN
Sbjct: 523 CRVHNRVDLGEIAAKRVFELEPRN 546
>gi|449451667|ref|XP_004143583.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
gi|449504924|ref|XP_004162332.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 595
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 156/426 (36%), Positives = 240/426 (56%)
Query: 240 ARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGR 299
A+ +F I S + W +I Y + A Y+ ML + N L+ AC
Sbjct: 41 AQRVFNGITSPNTFMWNAIIRAYSNSDEPELAFLSYQQMLSSSVPHNSYTFPFLLRACRN 100
Query: 300 AMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNAL 359
+A GE LQ+H +++K GF F ++H YA CG I+ AR F+ + SWN +
Sbjct: 101 LLAMGEALQVHGLVIKLGFGSDVFALNALLHVYALCGEIHCARQLFDNIPERDAVSWNIM 160
Query: 360 IAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNE 419
I G+I++G ++ A +F +M ++V SW+++ISG + Q AL L + M +AG + +
Sbjct: 161 IDGYIKSGDVKTAYGVFLDMPLKNVVSWTSLISGLVEAGQSVEALSLCYEMQNAGFELDG 220
Query: 420 ITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYH 479
+ + S+ A A+ G L +GRW H YVLNN + ++ + A+++MY KCG + A VF
Sbjct: 221 VAIASLLTACANLGALDQGRWLHFYVLNNGVDVDRVIGCALVNMYVKCGDMEEALSVFGK 280
Query: 480 IRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVD 539
++ V W A+I G A+HG L+ ++ + + I+ NSITF VL C + GLV+
Sbjct: 281 LKGNQKDVYIWTAMIDGFAIHGRGVEALEWFNRMRREGIRPNSITFTAVLRACSYGGLVE 340
Query: 540 LGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAA 599
G+ FKSMK YNV P ++HYGCMVDLLGR+G+L++A+E+I+ MPMK VIWG LL A
Sbjct: 341 EGKELFKSMKCFYNVNPSIEHYGCMVDLLGRSGRLDEAKELIKKMPMKPSAVIWGALLKA 400
Query: 600 SRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLP 659
IH + +G + L + H + L+ I A G+W++A +R +M+ G+ P
Sbjct: 401 CWIHRDFLLGSQVGAHLVEVDSDHSGRYIQLATILAAEGKWKEAAEVRLKMKSLGVPISP 460
Query: 660 GFSGVV 665
G S V
Sbjct: 461 GKSSVT 466
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 112/430 (26%), Positives = 197/430 (45%), Gaps = 50/430 (11%)
Query: 108 AREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVH 167
A+ VF+ + ++I ++ +D A ++ M V N T ++ + +
Sbjct: 41 AQRVFNGITSPNTFMWNAIIRAYSNSDEPELAFLSYQQMLSSSVPHNSYTFPFLLRACRN 100
Query: 168 LGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVM 227
L + E +HGLVIKL V LL++Y +C + AR LFD + ER+ VSWN+M
Sbjct: 101 LLAMGEALQVHGLVIKLGFGSDVFALNALLHVYALCGEIHCARQLFDNIPERDAVSWNIM 160
Query: 228 LNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPND 287
++G+ K+G V+ A +F +P K+VVSW ++I G ++ + EAL++ M G +
Sbjct: 161 IDGYIKSGDVKTAYGVFLDMPLKNVVSWTSLISGLVEAGQSVEALSLCYEMQNAGFELDG 220
Query: 288 VMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFE- 346
V I L++AC A +G +H ++ G D I +++ Y CG + A F
Sbjct: 221 VAIASLLTACANLGALDQGRWLHFYVLNNGVDVDRVIGCALVNMYVKCGDMEEALSVFGK 280
Query: 347 -LGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALE 405
G + + W A+I GF +G +A + FN M++
Sbjct: 281 LKGNQKDVYIWTAMIDGFAIHGRGVEALEWFNRMRRE----------------------- 317
Query: 406 LFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHE-----YVLNNSITLNDNLSAAI 460
G++PN IT +V A + G ++EG+ + Y +N SI +
Sbjct: 318 --------GIRPNSITFTAVLRACSYGGLVEEGKELFKSMKCFYNVNPSI----EHYGCM 365
Query: 461 IDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANL-------TLKIYSDL 513
+D+ + G ++ A E+ + + ++V W A++ +H D L +++ SD
Sbjct: 366 VDLLGRSGRLDEAKELIKKMPMKPSAVI-WGALLKACWIHRDFLLGSQVGAHLVEVDSDH 424
Query: 514 EKRNIKLNSI 523
R I+L +I
Sbjct: 425 SGRYIQLATI 434
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 97/340 (28%), Positives = 162/340 (47%), Gaps = 45/340 (13%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
LR C +A+ + Q+H L+ K G S+ F N+L+++YA CG I A+ +FD+ D
Sbjct: 95 LRACRNLLAMGEALQVHGLVIKLGFGSDVFALNALLHVYALCGEIHCARQLFDNIPERDA 154
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
V+ NIMI GYI++ + A VF P+K VS+TS+I G + EAL + +M+
Sbjct: 155 VSWNIMIDGYIKSGDVKTAYGVFLDMPLKNVVSWTSLISGLVEAGQSVEALSLCYEMQNA 214
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
G + V +AS++++ +LG + + R LH V+ +D +I L+NMY C + EA
Sbjct: 215 GFELDGVAIASLLTACANLGALDQGRWLHFYVLNNGVDVDRVIGCALVNMYVKCGDMEEA 274
Query: 210 RSLFDEMK--ERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVER 267
S+F ++K ++++ W M++GFA G R
Sbjct: 275 LSVFGKLKGNQKDVYIWTAMIDGFAIHG-------------------------------R 303
Query: 268 LSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQAT 327
EAL + M +GI PN + ++ AC EG ++ C+ + +
Sbjct: 304 GVEALEWFNRMRREGIRPNSITFTAVLRACSYGGLVEEGKELFK-----SMKCFYNVNPS 358
Query: 328 IIHF------YAACGRINLAR-LQFELGIKDHIASWNALI 360
I H+ GR++ A+ L ++ +K W AL+
Sbjct: 359 IEHYGCMVDLLGRSGRLDEAKELIKKMPMKPSAVIWGALL 398
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 113/253 (44%), Gaps = 73/253 (28%)
Query: 16 NLQNSDYEL---ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCG 72
+QN+ +EL A+ S L C+ A+ QG+ +H + +G++ + I +L+N+Y KCG
Sbjct: 210 EMQNAGFELDGVAIASLLTACANLGALDQGRWLHFYVLNNGVDVDRVIGCALVNMYVKCG 269
Query: 73 LISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQ 132
+ +A S+F G ++ ++ ++V+ +T+MI GFA
Sbjct: 270 DMEEALSVF----------------GKLKGNQ----KDVY---------IWTAMIDGFAI 300
Query: 133 NDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVII 192
+ EALE F MR G+ PN +T +V+ + + GG+ E
Sbjct: 301 HGRGVEALEWFNRMRREGIRPNSITFTAVLRACSY-GGLVE------------------- 340
Query: 193 STNLLNMYCVCSSLVEARSLFDEMK-----ERNIVSWNVMLNGFAKAGLVELARELFERI 247
E + LF MK +I + M++ ++G ++ A+EL +++
Sbjct: 341 ---------------EGKELFKSMKCFYNVNPSIEHYGCMVDLLGRSGRLDEAKELIKKM 385
Query: 248 PSK-DVVSWGTMI 259
P K V WG ++
Sbjct: 386 PMKPSAVIWGALL 398
>gi|413947530|gb|AFW80179.1| hypothetical protein ZEAMMB73_142662 [Zea mays]
Length = 649
Score = 306 bits (785), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 187/560 (33%), Positives = 281/560 (50%), Gaps = 54/560 (9%)
Query: 108 AREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVH 167
AR + + P +C V+ A+ D A+ + M G +P+ T ++ +
Sbjct: 8 ARRLLEGIPRRCLVA--------ARED----AVAGYARMLARGAMPDAYTFPPLLKAVAR 55
Query: 168 LGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVM 227
R +H V+K + ++T+L+ Y AR+L E + V WN
Sbjct: 56 GSSAAPVRAVHAHVVKFGMGRNAHVATSLVTAYAAGGDGAAARALLSERERDTPVVWN-- 113
Query: 228 LNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPND 287
+I G+ + R EA + M G AP
Sbjct: 114 -----------------------------ALISGHNRCRRFGEACCSFVDMARAGAAPTP 144
Query: 288 VMIVDLISACGRAMAFGE---GLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQ 344
V V ++SACG+ G+ G+Q+H +V +G ++ ++ YA C + A
Sbjct: 145 VTYVSVLSACGKGT--GDVLLGMQVHGRVVGSGVLPDLRVENALVDMYAECADMESAWKL 202
Query: 345 FELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMAL 404
F+ + SW +L++G R G +++AR LF M +RD SW+AMI GY Q + AL
Sbjct: 203 FDGMQVRSVVSWTSLLSGLTRLGRVDEARDLFGRMPERDTVSWTAMIDGYVQAARFREAL 262
Query: 405 ELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMY 464
E+F M + V +E TMVSV A A G L+ G W Y+ I ++ + A+IDMY
Sbjct: 263 EMFREMQCSNVSADEFTMVSVITACAQLGALEMGEWVRVYMSRQGIKMDAFVGNALIDMY 322
Query: 465 AKCGSINTAFEVF--YHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNS 522
+KCGSI A +VF H RD+ T W AII GLA++G ++++ + + +
Sbjct: 323 SKCGSIERALDVFKDMHHRDKFT----WTAIILGLAVNGYGEEAIEMFHRMIGVSETPDE 378
Query: 523 ITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIR 582
+TFIGVL+ C HAGLVD G +F SM+ YN+ P++ HYGC++DL GRAG++ +A + I
Sbjct: 379 VTFIGVLTACTHAGLVDKGREFFLSMRETYNIAPNVVHYGCIIDLFGRAGKITEALDAID 438
Query: 583 SMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWED 642
MPM + IWGTLLAA R+HGN E+GE + L + P + LLSNIYA RWED
Sbjct: 439 QMPMTPNSTIWGTLLAACRVHGNSEIGELVTERLLQMDPENSTVYTLLSNIYAKCNRWED 498
Query: 643 AFSIRKEMRDCGMKRLPGFS 662
+R + + G+K+ PG S
Sbjct: 499 VRRLRHTIMEKGIKKEPGCS 518
Score = 186 bits (471), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 129/468 (27%), Positives = 212/468 (45%), Gaps = 71/468 (15%)
Query: 43 QQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRN 102
+ +H+ + K G+ N + SL+ YA G + A+++ PV N +ISG+ R
Sbjct: 63 RAVHAHVVKFGMGRNAHVATSLVTAYAAGGDGAAARALLSERERDTPVVWNALISGHNRC 122
Query: 103 DRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVI 162
R +A CC F DM G P VT SV+
Sbjct: 123 RRFGEA----------CCS---------------------FVDMARAGAAPTPVTYVSVL 151
Query: 163 SS-SVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNI 221
S+ G + +HG V+ + + + L++MY C+ + A LFD M+ R++
Sbjct: 152 SACGKGTGDVLLGMQVHGRVVGSGVLPDLRVENALVDMYAECADMESAWKLFDGMQVRSV 211
Query: 222 VSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCD 281
VSW +L+G + G V+ AR+LF R+P +D VSW MIDGY+Q R EAL M+R M C
Sbjct: 212 VSWTSLLSGLTRLGRVDEARDLFGRMPERDTVSWTAMIDGYVQAARFREALEMFREMQCS 271
Query: 282 GIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLA 341
++ ++ +V +I+AC + A G + + + G F+ +I Y+ CG
Sbjct: 272 NVSADEFTMVSVITACAQLGALEMGEWVRVYMSRQGIKMDAFVGNALIDMYSKCGS---- 327
Query: 342 RLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPN 401
IE A +F +M RD ++W+A+I G A N
Sbjct: 328 ---------------------------IERALDVFKDMHHRDKFTWTAIILGLAVNGYGE 360
Query: 402 MALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLN--DNL--S 457
A+E+FH M+ P+E+T + V A +G + +GR E+ L+ T N N+
Sbjct: 361 EAIEMFHRMIGVSETPDEVTFIGVLTACTHAGLVDKGR---EFFLSMRETYNIAPNVVHY 417
Query: 458 AAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANL 505
IID++ + G I A + + T + + W ++ +HG++ +
Sbjct: 418 GCIIDLFGRAGKITEALDAIDQM-PMTPNSTIWGTLLAACRVHGNSEI 464
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 89/291 (30%), Positives = 146/291 (50%), Gaps = 14/291 (4%)
Query: 27 VSALRYCSAHIA-VSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCS 85
VS L C V G Q+H + SG+ + ++N+L+++YA+C + A +FD
Sbjct: 148 VSVLSACGKGTGDVLLGMQVHGRVVGSGVLPDLRVENALVDMYAECADMESAWKLFDGMQ 207
Query: 86 TLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRD 145
V+ ++SG R R+++AR++F + P + VS+T+MI G+ Q +REALE+FR+
Sbjct: 208 VRSVVSWTSLLSGLTRLGRVDEARDLFGRMPERDTVSWTAMIDGYVQAARFREALEMFRE 267
Query: 146 MRILGVIPNEVTLASVISSSVHLG----GIWECRMLHGLVIKLMIDGFVIISTNLLNMYC 201
M+ V +E T+ SVI++ LG G W + IK+ D FV L++MY
Sbjct: 268 MQCSNVSADEFTMVSVITACAQLGALEMGEWVRVYMSRQGIKM--DAFV--GNALIDMYS 323
Query: 202 VCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERI----PSKDVVSWGT 257
C S+ A +F +M R+ +W ++ G A G E A E+F R+ + D V++
Sbjct: 324 KCGSIERALDVFKDMHHRDKFTWTAIILGLAVNGYGEEAIEMFHRMIGVSETPDEVTFIG 383
Query: 258 MIDGYLQVERLSEALTMYRAML-CDGIAPNDVMIVDLISACGRAMAFGEGL 307
++ + + + +M IAPN V +I GRA E L
Sbjct: 384 VLTACTHAGLVDKGREFFLSMRETYNIAPNVVHYGCIIDLFGRAGKITEAL 434
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/243 (20%), Positives = 100/243 (41%), Gaps = 72/243 (29%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E +VS + C+ A+ G+ + + + G++ + F+ N+LI++Y+KCG I +A +F
Sbjct: 277 EFTMVSVITACAQLGALEMGEWVRVYMSRQGIKMDAFVGNALIDMYSKCGSIERALDVFK 336
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
D ++T++I+G A N EA+E+
Sbjct: 337 DMHHRDK-------------------------------FTWTAIILGLAVNGYGEEAIEM 365
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
F M + P+EVT V+++ H G ++D
Sbjct: 366 FHRMIGVSETPDEVTFIGVLTACTHAG---------------LVD--------------- 395
Query: 203 CSSLVEARSLFDEMKER-----NIVSWNVMLNGFAKAGLVELARELFERIP-SKDVVSWG 256
+ R F M+E N+V + +++ F +AG + A + +++P + + WG
Sbjct: 396 -----KGREFFLSMRETYNIAPNVVHYGCIIDLFGRAGKITEALDAIDQMPMTPNSTIWG 450
Query: 257 TMI 259
T++
Sbjct: 451 TLL 453
>gi|414885035|tpg|DAA61049.1| TPA: hypothetical protein ZEAMMB73_995105 [Zea mays]
Length = 824
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 197/643 (30%), Positives = 315/643 (48%), Gaps = 52/643 (8%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
++ ++ R +AH+ + L F + +T N+++ YA G + QA S F
Sbjct: 104 DMEVIRRNRAITAHMRAGRVPDAERL-FAAMPRRSTSTYNTMLAGYAANGRLPQALSFFR 162
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
S D + N ++ + L D R +FD+ P+K VSY MI A + A
Sbjct: 163 SIPRPDSFSYNTLLHALGVSSSLADVRALFDEMPVKDSVSYNVMISSHANHGLVSLARHY 222
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTN-LLNMYC 201
F L + V+ ++++ V G I E R L + + IS N L+ Y
Sbjct: 223 FD----LAPEKDAVSWNGMLAAYVRNGRIQEARELFDSRTE-----WDAISWNALMAGYV 273
Query: 202 VCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDG 261
S + EA+ +F++M +R++VSWN M++G+A+ G + AR LF+ P +DV +W ++ G
Sbjct: 274 QRSQIEEAQKMFNKMPQRDVVSWNTMVSGYARRGDMAEARRLFDVAPIRDVFTWTAIVSG 333
Query: 262 YLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCY 321
Y Q L EA ++ AM + M+ + R M
Sbjct: 334 YAQNGMLEEAKRVFDAMPDKNAVSWNAMMAAYVQ---RRM-------------------- 370
Query: 322 DFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQK 381
+ A+ F+ ++ASWN ++ G+ + GM+++AR +F M +
Sbjct: 371 ----------------MEEAKELFDAMPCRNVASWNTMLTGYAQAGMLDEARAIFGMMPQ 414
Query: 382 RDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWA 441
+D SW+AM++ Y+Q L+LF M G N V A L+ G
Sbjct: 415 KDAVSWAAMLAAYSQIGFSEETLQLFKEMGRCGEWVNRSAFACVLSTCADIAALECGMQL 474
Query: 442 HEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHG 501
H ++ + + A++ MY KCGS+ A F + +R V WN +I G A HG
Sbjct: 475 HSRLIKAGYGVGCFVGNALLAMYFKCGSMEEAHSAFEEMEER--DVVSWNTMIAGYARHG 532
Query: 502 DANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHY 561
L+++ + K + K + IT +GVL+ C H+GLV+ G YF SM + V +HY
Sbjct: 533 FGKEALEVFDTMRKTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHRDFGVATKPEHY 592
Query: 562 GCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQP 621
CM+DLLGRAG+L++A +++ MP + D +WG LL ASRIH N E+G AA+ + L+P
Sbjct: 593 TCMIDLLGRAGRLDEAVNLMKDMPFEPDSTMWGALLGASRIHRNSELGRNAAEKIFELEP 652
Query: 622 SHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
+ VLLSNIYA +G+W D +R M + G+K++PGFS +
Sbjct: 653 ENAGMYVLLSNIYASSGKWRDVDKMRHIMHERGVKKVPGFSWI 695
>gi|297811669|ref|XP_002873718.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319555|gb|EFH49977.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 548
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 162/464 (34%), Positives = 262/464 (56%), Gaps = 39/464 (8%)
Query: 235 GLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLI 294
G ++ A +LFE IP DV ++ G Q + + + +Y M G++P+ ++
Sbjct: 60 GALKYAHKLFEEIPKPDVSICNHVLRGSAQSLKPEKTVALYTEMEKRGVSPDRYTFTFVL 119
Query: 295 SACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIA 354
AC + G IH +V+ GF ++++ +I F+A CG + +A F+ K H
Sbjct: 120 KACSKLEWRSNGFAIHGKVVRHGFLLNEYVKNALILFHANCGDLGIASELFDDSAKAHKV 179
Query: 355 SWNALIAGFIRNGMIEDA-------------------------------RQLFNNMQKRD 383
+W+++ +G+ + G I++A R+LF+ ++D
Sbjct: 180 AWSSMTSGYAKRGKIDEAMRLFDEMPDKDQVAWNVMITGCLKCREMDSARELFDRFTEKD 239
Query: 384 VYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHE 443
V +W+AMISGY P AL +F M DAG P+ +T++S+ A A G L+ G+ H
Sbjct: 240 VVTWNAMISGYVNCGYPKEALSIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHI 299
Query: 444 YVL-----NNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLA 498
Y+L ++SI + + A+IDMYAKCGSI+ A EVF ++DR +S WN +I GLA
Sbjct: 300 YILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGMKDR--DLSTWNTLIVGLA 357
Query: 499 MHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDL 558
+H A +++++ ++++ + N +TFIGV+ C H+G VD G +YF M+ +YN+EP++
Sbjct: 358 LH-HAEGSVEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNI 416
Query: 559 KHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAG 618
KHYGCMVD+LGRAG LE+A + SM ++ + ++W TLL A +I+GNVE+G+ A + L
Sbjct: 417 KHYGCMVDMLGRAGLLEEAFMFVESMKIEPNAIVWRTLLGACKIYGNVELGKYANEKLLS 476
Query: 619 LQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
++ VLLSNIYA G+W+ +RK D +K+ G S
Sbjct: 477 MRKDESGDYVLLSNIYASTGQWDGVQKVRKMFDDTRVKKPTGIS 520
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 119/476 (25%), Positives = 208/476 (43%), Gaps = 53/476 (11%)
Query: 44 QIHSLIFKSGLESNTFIQNSLINLYAKC----GLISQAKSMFDSCSTLDPVACNIMISGY 99
QIH+ + +GL SN + LI Y+ G + A +F+ D CN ++ G
Sbjct: 30 QIHAFMVVNGLMSNLSVVGELI--YSASLSVPGALKYAHKLFEEIPKPDVSICNHVLRGS 87
Query: 100 IRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDC----WRE-ALEVFRDMRILGVIPN 154
++ + ++ + K VS F C WR + + G + N
Sbjct: 88 AQSLKPEKTVALYTEME-KRGVSPDRYTFTFVLKACSKLEWRSNGFAIHGKVVRHGFLLN 146
Query: 155 EVTLASVISSSVHLGGIWECRMLHGLVIKLMID---GFVIISTNLLNMYCVCSSLVEARS 211
E ++I + G + G+ +L D + +++ + Y + EA
Sbjct: 147 EYVKNALILFHANCGDL-------GIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMR 199
Query: 212 LFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEA 271
LFDEM +++ V+WNVM+ G K ++ ARELF+R KDVV+W MI GY+ EA
Sbjct: 200 LFDEMPDKDQVAWNVMITGCLKCREMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEA 259
Query: 272 LTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHF 331
L++++ M G P+ V I+ L+SAC G ++H I++ T I
Sbjct: 260 LSIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPI-- 317
Query: 332 YAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMI 391
WNALI + + G I+ A ++F M+ RD+ +W+ +I
Sbjct: 318 ------------------------WNALIDMYAKCGSIDRAIEVFRGMKDRDLSTWNTLI 353
Query: 392 SGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSIT 451
G A + ++E+F M V PNE+T + V A + SG + EGR + ++ +
Sbjct: 354 VGLALHHAEG-SVEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGR-KYFSLMRDMYN 411
Query: 452 LNDNLS--AAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANL 505
+ N+ ++DM + G + AF ++ ++ W ++ ++G+ L
Sbjct: 412 IEPNIKHYGCMVDMLGRAGLLEEAFMFVESMKIEPNAIV-WRTLLGACKIYGNVEL 466
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/355 (25%), Positives = 157/355 (44%), Gaps = 75/355 (21%)
Query: 13 QKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKC- 71
+K + Y V L+ CS S G IH + + G N +++N+LI +A C
Sbjct: 104 EKRGVSPDRYTFTFV--LKACSKLEWRSNGFAIHGKVVRHGFLLNEYVKNALILFHANCG 161
Query: 72 ------------------------------GLISQAKSMFDSCSTLDPVACNIMISGYIR 101
G I +A +FD D VA N+MI+G ++
Sbjct: 162 DLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEMPDKDQVAWNVMITGCLK 221
Query: 102 NDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASV 161
++ ARE+FD+ K V++ +MI G+ +EAL +F++MR G P+ VT+ S+
Sbjct: 222 CREMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALSIFKEMRDAGEHPDVVTILSL 281
Query: 162 ISSSVHLGGIWECRMLHGLVIKLM-IDGFVIISTN----LLNMYCVCSSLVEARSLFDEM 216
+S+ LG + + LH +++ + + + T L++MY C S+ A +F M
Sbjct: 282 LSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGM 341
Query: 217 KERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYR 276
K+R++ +WN ++ G A E + E+FE +++RL
Sbjct: 342 KDRDLSTWNTLIVGLA-LHHAEGSVEMFE------------------EMQRLK------- 375
Query: 277 AMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHF 331
+ PN+V + +I AC + EG + S++ D Y+ I+ I H+
Sbjct: 376 ------VWPNEVTFIGVILACSHSGRVDEGRKYFSLMR----DMYN-IEPNIKHY 419
>gi|255565124|ref|XP_002523554.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223537116|gb|EEF38749.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 611
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 203/650 (31%), Positives = 321/650 (49%), Gaps = 63/650 (9%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
L+ CS ++ G+QIH I SG + F+ LI +YA C
Sbjct: 2 LQLCSNLKSLHAGKQIHQQITVSGWGKDPFMLTKLIQMYADC------------------ 43
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
D L A+ +FDK P ++T++ + ++ + + ++ + M+
Sbjct: 44 -------------DHLFSAQRLFDKMPQPNVYAWTAIFGFYLRHGMYDKCVQNYGFMKYS 90
Query: 150 GVIPNEVTLASVISSSVHL----GGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSS 205
V+P+ V+ + L GGIW +H VI + + + +L++MY C +
Sbjct: 91 DVLPDNYVFPKVLRACTQLLWFEGGIW----IHKDVIVCGCESNLQVCNSLIDMYVKCGN 146
Query: 206 LVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIP----SKDVVSWGTMIDG 261
AR +F+EM+ER++ SWN M++G+ GL +LA EL + DVV+W T++D
Sbjct: 147 ARSARLVFEEMEERDLFSWNSMISGYVSNGLADLAVELLNCMRLDGFEPDVVTWNTLMDA 206
Query: 262 YLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSI-----IVKA 316
Y Q+ R EA + + + PN + LIS+ + L++ +V
Sbjct: 207 YCQMGRFDEAWEVLKQIE----QPNIISWTTLISSYSKIGEHDMSLRVFQDMIIREVVSP 262
Query: 317 GFDCYDFIQATIIHFYA--ACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQ 374
DC + + H A + I+ + E + ++ AL+ + + G I+DA
Sbjct: 263 DLDCLCSVLVSCRHIGALRSGKEIHGYGTKMETNTVFYSSAGAALLTMYAKCGRIQDAIN 322
Query: 375 LFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGT 434
+F M K D+ +W+AMI G+ + + A+E F M +K N+ T +S +
Sbjct: 323 VFELMDKSDIVTWNAMILGFVELDLGKQAIECFREMQRMDIK-NDQTTISTILPVCD--- 378
Query: 435 LKEGRWAHEYVLNNSITLNDNLSA--AIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNA 492
L+ G H YV SITL+ ++ A+I MY KCG + +A+ +F + ++ V WN
Sbjct: 379 LQYGNPIHAYV-RKSITLSSVVTVWNAVIHMYCKCGCVRSAYTIFCSMPNK--DVVSWNT 435
Query: 493 IICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVY 552
+I G MHG LK+ ++ I NS TF VLS C H+GLVD G R F+SM Y
Sbjct: 436 MIGGFGMHGHGQAALKLLKEMILSGIFPNSTTFTSVLSACSHSGLVDEGFRLFRSMTEDY 495
Query: 553 NVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERA 612
++ P ++HY C+VD+L RAGQ DA I MP++ D IWG LLAA R + N++ G A
Sbjct: 496 SITPRMEHYSCIVDMLARAGQFADAVTFIHKMPLEPDKSIWGALLAACRAYQNLDFGRLA 555
Query: 613 AKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
A+ L ++P V LSNIYA AGRW+DA +RKE+ G+ + G S
Sbjct: 556 AEQLIRMEPKCAGHYVTLSNIYARAGRWDDAGRVRKEIEGKGLVKPSGQS 605
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 144/595 (24%), Positives = 248/595 (41%), Gaps = 110/595 (18%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
LR C+ + G IH + G ESN + NSLI++Y KCG A+ +F+ D
Sbjct: 103 LRACTQLLWFEGGIWIHKDVIVCGCESNLQVCNSLIDMYVKCGNARSARLVFEEMEERDL 162
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKC----CVSYTSMIMGFAQNDCWREALEVFRD 145
+ N MISGY+ N + A E+ + + V++ +++ + Q + EA EV +
Sbjct: 163 FSWNSMISGYVSNGLADLAVELLNCMRLDGFEPDVVTWNTLMDAYCQMGRFDEAWEVLKQ 222
Query: 146 MRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFV--IISTNLLNMYCVC 203
+ PN ++ ++ISS +G H + +++ D + ++S +L C+C
Sbjct: 223 IEQ----PNIISWTTLISSYSKIGE-------HDMSLRVFQDMIIREVVSPDL---DCLC 268
Query: 204 SSLVEARSL-----------FDEMKERNIVSWN----VMLNGFAKAGLVELARELFERIP 248
S LV R + + E N V ++ +L +AK G ++ A +FE +
Sbjct: 269 SVLVSCRHIGALRSGKEIHGYGTKMETNTVFYSSAGAALLTMYAKCGRIQDAINVFELMD 328
Query: 249 SKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQ 308
D+V+W MI G+++++ +A+ +R M I + I ++ C G
Sbjct: 329 KSDIVTWNAMILGFVELDLGKQAIECFREMQRMDIKNDQTTISTILPVCD----LQYGNP 384
Query: 309 IHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGM 368
IH+ + K+ I L+ + + WNA+I + + G
Sbjct: 385 IHAYVRKS---------------------ITLSSV---------VTVWNAVIHMYCKCGC 414
Query: 369 IEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCA 428
+ A +F +M +DV SW+ MI G+ + AL+L M+ +G+ PN T SV A
Sbjct: 415 VRSAYTIFCSMPNKDVVSWNTMIGGFGMHGHGQAALKLLKEMILSGIFPNSTTFTSVLSA 474
Query: 429 IASSGTLKEG-RWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSV 487
+ SG + EG R + SIT + I+DM A+ G A F H
Sbjct: 475 CSHSGLVDEGFRLFRSMTEDYSITPRMEHYSCIVDMLARAGQFADAV-TFIHKMPLEPDK 533
Query: 488 SPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKS 547
S W A++ + Y +L+ G L+
Sbjct: 534 SIWGALLAAC----------RAYQNLD-----------FGRLAA---------------- 556
Query: 548 MKSVYNVEPDLK-HYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASR 601
+ + +EP HY + ++ RAG+ +DA V + + K V G L +R
Sbjct: 557 -EQLIRMEPKCAGHYVTLSNIYARAGRWDDAGRVRKEIEGKGLVKPSGQSLIETR 610
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 74/369 (20%), Positives = 151/369 (40%), Gaps = 53/369 (14%)
Query: 293 LISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDH 352
++ C + G QIH I +G+ F+ +I YA C + A+ F+ + +
Sbjct: 1 MLQLCSNLKSLHAGKQIHQQITVSGWGKDPFMLTKLIQMYADCDHLFSAQRLFDKMPQPN 60
Query: 353 IASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVD 412
+ +W A+ ++R+GM + Q + M+ DV
Sbjct: 61 VYAWTAIFGFYLRHGMYDKCVQNYGFMKYSDVL--------------------------- 93
Query: 413 AGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINT 472
P+ V A + G W H+ V+ N + ++IDMY KCG+ +
Sbjct: 94 ----PDNYVFPKVLRACTQLLWFEGGIWIHKDVIVCGCESNLQVCNSLIDMYVKCGNARS 149
Query: 473 AFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTC 532
A VF + +R + WN++I G +G A+L +++ + + + + +T+ ++
Sbjct: 150 ARLVFEEMEER--DLFSWNSMISGYVSNGLADLAVELLNCMRLDGFEPDVVTWNTLMDAY 207
Query: 533 CHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMK----A 588
C G D K ++ +P++ + ++ + G+ + + V + M ++
Sbjct: 208 CQMGRFDEAWEVLKQIE-----QPNIISWTTLISSYSKIGEHDMSLRVFQDMIIREVVSP 262
Query: 589 DVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSN-------IYADAGRWE 641
D+ ++L + R G + R+ K + G + V S+ +YA GR +
Sbjct: 263 DLDCLCSVLVSCRHIGAL----RSGKEIHGYGTKMETNTVFYSSAGAALLTMYAKCGRIQ 318
Query: 642 DAFSIRKEM 650
DA ++ + M
Sbjct: 319 DAINVFELM 327
>gi|147864534|emb|CAN78385.1| hypothetical protein VITISV_017238 [Vitis vinifera]
Length = 643
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 164/438 (37%), Positives = 250/438 (57%), Gaps = 41/438 (9%)
Query: 225 NVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIA 284
N +++ +A + A++LF +DVVSW MIDGY++ + ++ M+C
Sbjct: 39 NSLIHLYANGKDLGAAKQLFSLCSDRDVVSWNAMIDGYVKRGEMGHTRMVFDRMVCR--- 95
Query: 285 PNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQ 344
D+IS TII+ YA G+I+ A+
Sbjct: 96 -------DVIS-----------------------------WNTIINGYAIVGKIDEAKRL 119
Query: 345 FELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMAL 404
F+ + ++ SWN++++GF++ G +E+A LF+ M RDV SW++M++ YAQ +PN AL
Sbjct: 120 FDEMPERNLVSWNSMLSGFVKCGNVEEAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEAL 179
Query: 405 ELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMY 464
LF M GVKP E T+VS+ A A G L +G H Y+ +N I +N + A++DMY
Sbjct: 180 ALFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMY 239
Query: 465 AKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSIT 524
AKCG I+ A +VF + + V WN II G+A+HG +++ ++++ +++ N IT
Sbjct: 240 AKCGKISLATQVFNAMESK--DVLAWNTIIAGMAIHGHVKEAQQLFKEMKEASVEPNDIT 297
Query: 525 FIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSM 584
F+ +LS C HAG+VD G++ M S Y +EP ++HY C++DLL RAG LE+A E+I +M
Sbjct: 298 FVAMLSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYDCVIDLLARAGLLEEAMELIGTM 357
Query: 585 PMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAF 644
PM+ + G LL RIHGN E+GE K L LQP H +LLSNIYA A +W+DA
Sbjct: 358 PMEPNPSALGALLGGCRIHGNFELGEMVGKRLINLQPCHSGRYILLSNIYAAAKKWDDAR 417
Query: 645 SIRKEMRDCGMKRLPGFS 662
+R M+ G+ ++PG S
Sbjct: 418 KVRNLMKVNGISKVPGVS 435
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 126/469 (26%), Positives = 202/469 (43%), Gaps = 111/469 (23%)
Query: 42 GQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIR 101
G +H+ + KSG E +++I NSLI+LYA
Sbjct: 19 GLLVHTHVVKSGFECDSYIVNSLIHLYAN------------------------------- 47
Query: 102 NDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASV 161
L A+++F + VS+ +MI G+
Sbjct: 48 GKDLGAAKQLFSLCSDRDVVSWNAMIDGY------------------------------- 76
Query: 162 ISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNI 221
V G + RM V M+ VI ++N Y + + EA+ LFDEM ERN+
Sbjct: 77 ----VKRGEMGHTRM----VFDRMVCRDVISWNTIINGYAIVGKIDEAKRLFDEMPERNL 128
Query: 222 VSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCD 281
VSWN ML+GF K G VE A LF +P +DVVSW +M+ Y Q + +EAL ++ M
Sbjct: 129 VSWNSMLSGFVKCGNVEEAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQMRAV 188
Query: 282 GIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLA 341
G+ P + +V L+SAC A +GL +H+ I + + ++ YA CG+I+LA
Sbjct: 189 GVKPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLA 248
Query: 342 RLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPN 401
F + +WN +IAG +G +++A+QLF M+
Sbjct: 249 TQVFNAMESKDVLAWNTIIAGMAIHGHVKEAQQLFKEMK--------------------- 287
Query: 402 MALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGR-----WAHEYVLNNSITLNDNL 456
+A V+PN+IT V++ A + +G + EG+ + Y + + D
Sbjct: 288 ----------EASVEPNDITFVAMLSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYD-- 335
Query: 457 SAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANL 505
+ID+ A+ G + A E+ + + S A++ G +HG+ L
Sbjct: 336 --CVIDLLARAGLLEEAMELIGTM-PMEPNPSALGALLGGCRIHGNFEL 381
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 159/342 (46%), Gaps = 62/342 (18%)
Query: 39 VSQGQQIHS-LIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMIS 97
V +G+ H+ ++F + + N++IN YA G I +AK +FD + V+ N M+S
Sbjct: 77 VKRGEMGHTRMVFDRMVCRDVISWNTIINGYAIVGKIDEAKRLFDEMPERNLVSWNSMLS 136
Query: 98 GYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVT 157
G+++ + +A +F + P + VS+ SM+ +AQ EAL +F MR +GV P E T
Sbjct: 137 GFVKCGNVEEAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQMRAVGVKPTEAT 196
Query: 158 LASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMK 217
+ S++S+ HLG + + LH + I+ I+ T L++MY C + A +F+ M+
Sbjct: 197 VVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAME 256
Query: 218 ERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRA 277
+++++WN ++ G A G V+ A++LF + + EA
Sbjct: 257 SKDVLAWNTIIAGMAIHGHVKEAQQLF---------------------KEMKEA------ 289
Query: 278 MLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGR 337
+ PND+ V ++SAC A EG ++ DC
Sbjct: 290 ----SVEPNDITFVAMLSACSHAGMVDEGQKL--------LDC----------------- 320
Query: 338 INLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNM 379
+ GI+ + ++ +I R G++E+A +L M
Sbjct: 321 -----MSSSYGIEPKVEHYDCVIDLLARAGLLEEAMELIGTM 357
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 99/231 (42%), Gaps = 71/231 (30%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E +VS L C+ A+ +G +H+ I + +E N+ + +L+++YAKCG IS A +F+
Sbjct: 194 EATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFN 253
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+ + D +A N +I+ G A + +EA ++
Sbjct: 254 AMESKDVLAWNTIIA-------------------------------GMAIHGHVKEAQQL 282
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
F++M+ V PN++T +++S+ H G M+D
Sbjct: 283 FKEMKEASVEPNDITFVAMLSACSHAG---------------MVD--------------- 312
Query: 203 CSSLVEARSLFDEMK-----ERNIVSWNVMLNGFAKAGLVELARELFERIP 248
E + L D M E + ++ +++ A+AGL+E A EL +P
Sbjct: 313 -----EGQKLLDCMSSSYGIEPKVEHYDCVIDLLARAGLLEEAMELIGTMP 358
>gi|449435340|ref|XP_004135453.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Cucumis sativus]
gi|449478665|ref|XP_004155385.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Cucumis sativus]
Length = 604
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 165/483 (34%), Positives = 261/483 (54%), Gaps = 40/483 (8%)
Query: 189 FVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGF-------AKAGLVELAR 241
FVI + L++ C+SL E + + + N+ S +L ++ A
Sbjct: 25 FVINQLHPLSLLSKCTSLNELKQIQAYTIKTNLQSDISVLTKLINFCTLNPTTSYMDHAH 84
Query: 242 ELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAM 301
LF++I KD++ + M GY + A +++ +LC G+ P+D L+ AC +
Sbjct: 85 HLFDQILDKDIILFNIMARGYARSNSPYLAFSLFGELLCSGLLPDDYTFSSLLKACASSK 144
Query: 302 AFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIA 361
A EG+ +H VK G + +I T+I+ YA C +N AR
Sbjct: 145 ALREGMGLHCFAVKLGLNHNIYICPTLINMYAECNDMNAAR------------------- 185
Query: 362 GFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEIT 421
+F+ M++ + S++A+I+GYA++ QPN AL LF + + ++P ++T
Sbjct: 186 ------------GVFDEMEQPCIVSYNAIITGYARSSQPNEALSLFRELQASNIEPTDVT 233
Query: 422 MVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIR 481
M+SV + A G L G+W HEYV ++ A+IDM+AKCGS+ A +F +R
Sbjct: 234 MLSVIMSCALLGALDLGKWIHEYVKKKGFDKYVKVNTALIDMFAKCGSLTDAISIFEGMR 293
Query: 482 DRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLG 541
R T W+A+I A HGD + ++ ++++ ++ + ITF+G+L C HAGLV+ G
Sbjct: 294 VRDTQA--WSAMIVAFATHGDGLKAISMFEEMKREGVRPDEITFLGLLYACSHAGLVEQG 351
Query: 542 ERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASR 601
YF SM Y + P +KHYGCMVDLLGRAG L++A + + +KA ++W TLL+A
Sbjct: 352 RGYFYSMSKTYGITPGIKHYGCMVDLLGRAGHLDEAYNFVDKLEIKATPILWRTLLSACS 411
Query: 602 IHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGF 661
HGNVE+ +R + + L +HG V+LSN+YA GRWED +RK M+D G+ ++PG
Sbjct: 412 THGNVEMAKRVIERIFELDDAHGGDYVILSNLYARVGRWEDVNHLRKLMKDRGVVKVPGC 471
Query: 662 SGV 664
S V
Sbjct: 472 SSV 474
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 137/292 (46%), Gaps = 64/292 (21%)
Query: 15 ANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLI 74
+ L DY + S L+ C++ A+ +G +H K GL N +I +LIN+YA+C
Sbjct: 124 SGLLPDDYTFS--SLLKACASSKALREGMGLHCFAVKLGLNHNIYICPTLINMYAEC--- 178
Query: 75 SQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQND 134
ND +N AR VFD+ C VSY ++I G+A++
Sbjct: 179 ---------------------------ND-MNAARGVFDEMEQPCIVSYNAIITGYARSS 210
Query: 135 CWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIIST 194
EAL +FR+++ + P +VT+ SVI S LG + + +H V K D +V ++T
Sbjct: 211 QPNEALSLFRELQASNIEPTDVTMLSVIMSCALLGALDLGKWIHEYVKKKGFDKYVKVNT 270
Query: 195 NLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVS 254
L++M+ C SL +A S+F+ M+ R+ +W+ M+ FA G
Sbjct: 271 ALIDMFAKCGSLTDAISIFEGMRVRDTQAWSAMIVAFATHG------------------- 311
Query: 255 WGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEG 306
DG +A++M+ M +G+ P+++ + L+ AC A +G
Sbjct: 312 -----DGL-------KAISMFEEMKREGVRPDEITFLGLLYACSHAGLVEQG 351
>gi|297745590|emb|CBI40755.3| unnamed protein product [Vitis vinifera]
Length = 789
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 191/623 (30%), Positives = 316/623 (50%), Gaps = 37/623 (5%)
Query: 44 QIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP-VAC-NIMISGYIR 101
Q+H K +T ++ S++++Y KCG + A+ +F C T +P + C N MI GY +
Sbjct: 135 QLHGFAEKFDFGIDTCVETSVLDMYIKCGAMDFAQKVF--CRTPNPSLFCWNSMIYGYSK 192
Query: 102 NDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASV 161
+ A E+F K P + VS+ +MI +Q+ E L F +M G PN +T ASV
Sbjct: 193 YGSVKKALELFAKMPERDTVSWNTMISILSQHGFGAETLNTFLEMWNQGFRPNSMTYASV 252
Query: 162 ISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNI 221
+S+ + + LH ++++ L++Y C
Sbjct: 253 LSACTSIYDLEWGAHLHARIVRM---------EPCLDVYAGCG----------------- 286
Query: 222 VSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCD 281
+++ +AK G +E AR++F+ + + VSW ++I G Q EAL ++ M
Sbjct: 287 -----LIDMYAKCGRLESARQVFDGLTEHNAVSWTSLIGGVAQAGFQEEALVLFNQMREV 341
Query: 282 GIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLA 341
+A + + ++ C G Q+H+ + G D + ++ YA CG + A
Sbjct: 342 PVASDQFTLATVLGVCLSQKDISIGEQLHAHTITRGLDSSVPVANALVTMYAKCGDVWKA 401
Query: 342 RLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPN 401
FEL I SW A+I F + G +E AR+ F+ M +R+V SW++M++ Y Q
Sbjct: 402 NHAFELMPIRDIISWTAMITAFSQAGDVEKAREYFDKMPERNVISWNSMLATYMQRGYWE 461
Query: 402 MALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAII 461
L+++ M+ GVK + IT + A A L G + N +++ +++
Sbjct: 462 EGLKVYIQMLREGVKTDWITFSTSISACADLAVLILGNQILAQAEKLGFSSNVSVANSVV 521
Query: 462 DMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLN 521
MY++CG I A ++F I + ++ WNA++ G A +G ++I+ + +
Sbjct: 522 TMYSRCGQIEEAQKMFSSIVMK--NLVSWNAMMAGYAQNGQGRKVIEIFEKMLNIGNVPD 579
Query: 522 SITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVI 581
I+++ VLS C H+G V G+ YF SM + + P +H+ CMVDLLGRAGQLE A+ +I
Sbjct: 580 QISYVSVLSGCSHSGFVSEGQYYFLSMTKDHGISPMSEHFVCMVDLLGRAGQLEQAKNLI 639
Query: 582 RSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWE 641
MP K + IWG LLAA RIHGN ++ E A K+L L S LL+NIY+++G+ +
Sbjct: 640 NQMPFKPNAAIWGALLAACRIHGNTKLAELAVKNLLELDAEGPGSYCLLANIYSESGKIQ 699
Query: 642 DAFSIRKEMRDCGMKRLPGFSGV 664
++RK MRD G+++ PG S +
Sbjct: 700 GVTNVRKLMRDKGVRKNPGCSWI 722
Score = 208 bits (530), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 154/594 (25%), Positives = 285/594 (47%), Gaps = 44/594 (7%)
Query: 29 ALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLD 88
+++ C++ ++ +++H+ + GL+S+ F+QN L+N+Y+ CGLIS A +F +
Sbjct: 10 SMKECASLRSIPIARKLHAQLIFMGLKSSIFLQNHLLNMYSNCGLISDAYRVFGGIMFPN 69
Query: 89 PVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRI 148
+ N MISG+ + ++ +A ++F+K P + VS+ SM+ G+ N
Sbjct: 70 VYSWNTMISGFADSGQMREAEKLFEKMPERDSVSWNSMMSGYFHNG-------------- 115
Query: 149 LGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVE 208
L + I +S LG + LHG K + T++L+MY C ++
Sbjct: 116 --------ELEATIKASGSLGYLKLALQLHGFAEKFDFGIDTCVETSVLDMYIKCGAMDF 167
Query: 209 ARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERL 268
A+ +F ++ WN M+ G++K G V+ A ELF ++P +D VSW TMI Q
Sbjct: 168 AQKVFCRTPNPSLFCWNSMIYGYSKYGSVKKALELFAKMPERDTVSWNTMISILSQHGFG 227
Query: 269 SEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD-FIQAT 327
+E L + M G PN + ++SAC G +H+ IV+ C D +
Sbjct: 228 AETLNTFLEMWNQGFRPNSMTYASVLSACTSIYDLEWGAHLHARIVRME-PCLDVYAGCG 286
Query: 328 IIHFYAACGRINLARLQFELGIKDHIA-SWNALIAGFIRNGMIEDARQLFNNMQK----R 382
+I YA CGR+ AR F+ G+ +H A SW +LI G + G E+A LFN M++
Sbjct: 287 LIDMYAKCGRLESARQVFD-GLTEHNAVSWTSLIGGVAQAGFQEEALVLFNQMREVPVAS 345
Query: 383 DVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAH 442
D ++ + ++ + ++ +L + G+ + ++ A G + + A
Sbjct: 346 DQFTLATVLGVCLSQKDISIGEQLHAHTITRGLDSSVPVANALVTMYAKCGDVWKANHAF 405
Query: 443 EYVLNNSITLNDNLS-AAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHG 501
E + + D +S A+I +++ G + A E F + +R +V WN+++ G
Sbjct: 406 EL-----MPIRDIISWTAMITAFSQAGDVEKAREYFDKMPER--NVISWNSMLATYMQRG 458
Query: 502 DANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHY 561
LK+Y + + +K + ITF +S C ++ LG + + + ++
Sbjct: 459 YWEEGLKVYIQMLREGVKTDWITFSTSISACADLAVLILGNQILAQAEKL-GFSSNVSVA 517
Query: 562 GCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGN----VEVGER 611
+V + R GQ+E+A+++ S+ MK ++V W ++A +G +E+ E+
Sbjct: 518 NSVVTMYSRCGQIEEAQKMFSSIVMK-NLVSWNAMMAGYAQNGQGRKVIEIFEK 570
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 132/488 (27%), Positives = 220/488 (45%), Gaps = 74/488 (15%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+ S L C++ + G +H+ I + + + LI++YAKCG
Sbjct: 247 MTYASVLSACTSIYDLEWGAHLHARIVRMEPCLDVYAGCGLIDMYAKCG----------- 295
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
RL AR+VFD VS+TS+I G AQ EAL +F
Sbjct: 296 --------------------RLESARQVFDGLTEHNAVSWTSLIGGVAQAGFQEEALVLF 335
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
MR + V ++ TLA+V+ + I LH I +D V ++ L+ MY C
Sbjct: 336 NQMREVPVASDQFTLATVLGVCLSQKDISIGEQLHAHTITRGLDSSVPVANALVTMYAKC 395
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYL 263
+ +A F+ M R+I+SW M+ F++AG VE ARE F+++P ++V+SW +M+ Y+
Sbjct: 396 GDVWKANHAFELMPIRDIISWTAMITAFSQAGDVEKAREYFDKMPERNVISWNSMLATYM 455
Query: 264 QVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDF 323
Q E L +Y ML +G+ + + ISAC G QI + K GF
Sbjct: 456 QRGYWEEGLKVYIQMLREGVKTDWITFSTSISACADLAVLILGNQILAQAEKLGFSSNVS 515
Query: 324 IQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRD 383
+ +++ Y+ CG+I A+ F + ++ SWNA++AG
Sbjct: 516 VANSVVTMYSRCGQIEEAQKMFSSIVMKNLVSWNAMMAG--------------------- 554
Query: 384 VYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHE 443
YAQN Q +E+F M++ G P++I+ VSV + SG + EG++
Sbjct: 555 ----------YAQNGQGRKVIEIFEKMLNIGNVPDQISYVSVLSGCSHSGFVSEGQY--- 601
Query: 444 YVLNNSITLNDNLSA------AIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGL 497
Y L S+T + +S ++D+ + G + A + + + + + W A++
Sbjct: 602 YFL--SMTKDHGISPMSEHFVCMVDLLGRAGQLEQAKNLINQMPFKPNA-AIWGALLAAC 658
Query: 498 AMHGDANL 505
+HG+ L
Sbjct: 659 RIHGNTKL 666
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 125/487 (25%), Positives = 216/487 (44%), Gaps = 39/487 (8%)
Query: 175 RMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKA 234
R LH +I + + + + +LLNMY C + +A +F + N+ SWN M++GFA +
Sbjct: 24 RKLHAQLIFMGLKSSIFLQNHLLNMYSNCGLISDAYRVFGGIMFPNVYSWNTMISGFADS 83
Query: 235 GLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLI 294
G + A +LFE++P +D VSW +M+ GY L I
Sbjct: 84 GQMREAEKLFEKMPERDSVSWNSMMSGYFHNGELEAT----------------------I 121
Query: 295 SACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIA 354
A G LQ+H K F ++ +++ Y CG ++ A+ F +
Sbjct: 122 KASGSLGYLKLALQLHGFAEKFDFGIDTCVETSVLDMYIKCGAMDFAQKVFCRTPNPSLF 181
Query: 355 SWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAG 414
WN++I G+ + G ++ A +LF M +RD SW+ MIS +Q+ L F M + G
Sbjct: 182 CWNSMIYGYSKYGSVKKALELFAKMPERDTVSWNTMISILSQHGFGAETLNTFLEMWNQG 241
Query: 415 VKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAF 474
+PN +T SV A S L+ G H ++ L+ +IDMYAKCG + +A
Sbjct: 242 FRPNSMTYASVLSACTSIYDLEWGAHLHARIVRMEPCLDVYAGCGLIDMYAKCGRLESAR 301
Query: 475 EVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCH 534
+VF + + +VS W ++I G+A G L +++ + + + + T VL C
Sbjct: 302 QVFDGLTEH-NAVS-WTSLIGGVAQAGFQEEALVLFNQMREVPVASDQFTLATVLGVCLS 359
Query: 535 AGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWG 594
+ +GE+ + ++ + +V + + G + A MP++ D++ W
Sbjct: 360 QKDISIGEQ-LHAHTITRGLDSSVPVANALVTMYAKCGDVWKANHAFELMPIR-DIISWT 417
Query: 595 TLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLS-----NIYADAGRWEDAFSIRKE 649
++ A G+VE + P R ++S Y G WE+ + +
Sbjct: 418 AMITAFSQAGDVEKAREYFDKM--------PERNVISWNSMLATYMQRGYWEEGLKVYIQ 469
Query: 650 MRDCGMK 656
M G+K
Sbjct: 470 MLREGVK 476
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 96/348 (27%), Positives = 172/348 (49%), Gaps = 13/348 (3%)
Query: 9 VFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLY 68
+FN + SD + L + L C + +S G+Q+H+ GL+S+ + N+L+ +Y
Sbjct: 334 LFNQMREVPVASD-QFTLATVLGVCLSQKDISIGEQLHAHTITRGLDSSVPVANALVTMY 392
Query: 69 AKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIM 128
AKCG + +A F+ D ++ MI+ + + + ARE FDK P + +S+ SM+
Sbjct: 393 AKCGDVWKANHAFELMPIRDIISWTAMITAFSQAGDVEKAREYFDKMPERNVISWNSMLA 452
Query: 129 GFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDG 188
+ Q W E L+V+ M GV + +T ++ IS+ L + + KL
Sbjct: 453 TYMQRGYWEEGLKVYIQMLREGVKTDWITFSTSISACADLAVLILGNQILAQAEKLGFSS 512
Query: 189 FVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIP 248
V ++ +++ MY C + EA+ +F + +N+VSWN M+ G+A+ G E+FE++
Sbjct: 513 NVSVANSVVTMYSRCGQIEEAQKMFSSIVMKNLVSWNAMMAGYAQNGQGRKVIEIFEKML 572
Query: 249 S----KDVVSWGTMIDGYLQVERLSEALTMYRAMLCD-GIAPNDVMIVDLISACGRAMAF 303
+ D +S+ +++ G +SE + +M D GI+P V ++ GRA
Sbjct: 573 NIGNVPDQISYVSVLSGCSHSGFVSEGQYYFLSMTKDHGISPMSEHFVCMVDLLGRA--- 629
Query: 304 GEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKD 351
G+ Q ++I + F I ++ AAC RI+ EL +K+
Sbjct: 630 GQLEQAKNLINQMPFKPNAAIWGALL---AAC-RIHGNTKLAELAVKN 673
>gi|326495056|dbj|BAJ85624.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 673
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 192/623 (30%), Positives = 301/623 (48%), Gaps = 96/623 (15%)
Query: 42 GQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIR 101
G+++H K+G ++ F+ N L+++YAK G
Sbjct: 142 GRRLHCNAVKAG-GADGFVMNCLVDMYAKAG----------------------------- 171
Query: 102 NDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASV 161
L +AR+VFD+ + VS+TSM+ G QN E L +F +MR V+P+E T+ASV
Sbjct: 172 --DLENARKVFDRILGRNVVSWTSMLSGCLQNGFAEEGLALFNEMREERVLPSEYTMASV 229
Query: 162 ISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNI 221
+ + LG + + R +HG VIK + I+ +L+MY C
Sbjct: 230 LMACTMLGSLHQGRWVHGSVIKHGMVFNPFITAAVLDMYVKC------------------ 271
Query: 222 VSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCD 281
G VE AR LF+ + D+V W TMI GY Q +AL ++
Sbjct: 272 -------------GEVEDARRLFDELGFVDLVLWTTMIVGYTQNGSPLDALLLFSDKKFV 318
Query: 282 GIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLA 341
I PN V I ++SA + G IH++ VK D + ++ YA C ++
Sbjct: 319 HIVPNSVTIATVLSASAQLRNLSLGRLIHAMSVKLLVIENDVVMNALVDMYAKCKALS-- 376
Query: 342 RLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPN 401
+A +F + +DV +W+++I+GY +N+ N
Sbjct: 377 -----------------------------EANGIFGRISNKDVVTWNSLIAGYVENDMGN 407
Query: 402 MALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAII 461
AL LF M G P+ I++V+ A G L G+ H Y + + N ++ A++
Sbjct: 408 EALMLFSQMRVQGSSPDAISIVNALSACVCLGDLLIGKCFHTYAVKRAFLSNVYVNTALL 467
Query: 462 DMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLN 521
++Y KC + +A VF + +R + W A+I G M GD+ ++ + + + K NI+ N
Sbjct: 468 NLYNKCADLPSAQRVFSEMSERNSVT--WGAMIGGYGMQGDSAGSIDLLNKMLKDNIQPN 525
Query: 522 SITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVI 581
+ F +LSTC H G+V +G+ F SM +N+ P +KHY CMVD+L RAG LE+A E I
Sbjct: 526 EVVFTSILSTCSHTGMVSVGKMCFDSMAQYFNITPSMKHYACMVDVLARAGNLEEALEFI 585
Query: 582 RSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWE 641
+ MPM AD+ IWG L ++H +E GE A + L P VL+SN+Y GRW+
Sbjct: 586 QKMPMPADISIWGAFLHGCKLHSRLEFGEEAINRMMVLHPDKPDFYVLMSNLYTSYGRWD 645
Query: 642 DAFSIRKEMRDCGMKRLPGFSGV 664
+ +IR+ M++ G+ +LPG S V
Sbjct: 646 KSLAIRRLMQERGLVKLPGCSSV 668
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 113/498 (22%), Positives = 220/498 (44%), Gaps = 104/498 (20%)
Query: 8 SVFNS-QKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLIN 66
++FN ++ + S+Y +A S L C+ ++ QG+ +H + K G+ N FI ++++
Sbjct: 209 ALFNEMREERVLPSEYTMA--SVLMACTMLGSLHQGRWVHGSVIKHGMVFNPFITAAVLD 266
Query: 67 LYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSM 126
+Y KCG + A+ +FD +D V MI GY +N +P+
Sbjct: 267 MYVKCGEVEDARRLFDELGFVDLVLWTTMIVGYTQNG-----------SPL--------- 306
Query: 127 IMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMI 186
+AL +F D + + ++PN VT+A+V+S+S L + R++H + +KL++
Sbjct: 307 -----------DALLLFSDKKFVHIVPNSVTIATVLSASAQLRNLSLGRLIHAMSVKLLV 355
Query: 187 DGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFER 246
++ L++MY C +L EA +F + +++V+WN
Sbjct: 356 IENDVVMNALVDMYAKCKALSEANGIFGRISNKDVVTWN--------------------- 394
Query: 247 IPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGE- 305
++I GY++ + +EAL ++ M G +P+ + IV+ +SAC + G+
Sbjct: 395 ----------SLIAGYVENDMGNEALMLFSQMRVQGSSPDAISIVNALSAC---VCLGDL 441
Query: 306 --GLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGF 363
G H+ VK F ++ +++ Y C + A+ F
Sbjct: 442 LIGKCFHTYAVKRAFLSNVYVNTALLNLYNKCADLPSAQRVF------------------ 483
Query: 364 IRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMV 423
+ M +R+ +W AMI GY +++L + M+ ++PNE+
Sbjct: 484 -------------SEMSERNSVTWGAMIGGYGMQGDSAGSIDLLNKMLKDNIQPNEVVFT 530
Query: 424 SVFCAIASSGTLKEGRWAHEYVLNN-SITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRD 482
S+ + +G + G+ + + +IT + A ++D+ A+ G++ A E F
Sbjct: 531 SILSTCSHTGMVSVGKMCFDSMAQYFNITPSMKHYACMVDVLARAGNLEEALE-FIQKMP 589
Query: 483 RTTSVSPWNAIICGLAMH 500
+S W A + G +H
Sbjct: 590 MPADISIWGAFLHGCKLH 607
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 103/404 (25%), Positives = 181/404 (44%), Gaps = 44/404 (10%)
Query: 203 CSSLVEARSLFDEMKE----RNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTM 258
C++L R+L + R + + +L+ +A G + AR + + P D ++
Sbjct: 33 CATLPSLRALHARLLAHGLLRALRARTKLLSCYAALGDLASARRVLDETPRPDPYTYRVA 92
Query: 259 IDGYLQVERLSEALTMYRAML--CDGIAPNDVMIVDL-ISACGRAMAFGEGLQIHSIIVK 315
+ + R ++AL ++R M C A +DV+++ L + A R+ F G ++H VK
Sbjct: 93 LGWHAAAGRHADALALHRGMRRRCPE-AHDDVVLLSLALKASVRSADFRYGRRLHCNAVK 151
Query: 316 AGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQL 375
AG F+ ++ YA G + AR F+ + ++ SW ++++G ++NG E+ L
Sbjct: 152 AG-GADGFVMNCLVDMYAKAGDLENARKVFDRILGRNVVSWTSMLSGCLQNGFAEEGLAL 210
Query: 376 FNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTL 435
FN M++ V P+E TM SV A G+L
Sbjct: 211 FNEMREERVL-------------------------------PSEYTMASVLMACTMLGSL 239
Query: 436 KEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIIC 495
+GRW H V+ + + N ++AA++DMY KCG + A +F + + W +I
Sbjct: 240 HQGRWVHGSVIKHGMVFNPFITAAVLDMYVKCGEVEDARRLFDEL--GFVDLVLWTTMIV 297
Query: 496 GLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVE 555
G +G L ++SD + +I NS+T VLS + LG + +E
Sbjct: 298 GYTQNGSPLDALLLFSDKKFVHIVPNSVTIATVLSASAQLRNLSLGRLIHAMSVKLLVIE 357
Query: 556 PDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAA 599
D+ +VD+ + L +A + + K DVV W +L+A
Sbjct: 358 NDVV-MNALVDMYAKCKALSEANGIFGRISNK-DVVTWNSLIAG 399
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/265 (21%), Positives = 117/265 (44%), Gaps = 17/265 (6%)
Query: 348 GIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELF 407
G+ + + L++ + G + AR++ + + D Y++ + +A + AL L
Sbjct: 50 GLLRALRARTKLLSCYAALGDLASARRVLDETPRPDPYTYRVALGWHAAAGRHADALALH 109
Query: 408 HGMVDAGVKP-NEITMVSV-FCAIASSGTLKEGRWAHEYVLN----NSITLNDNLSAAII 461
GM + +++ ++S+ A S + GR H + + +N ++
Sbjct: 110 RGMRRRCPEAHDDVVLLSLALKASVRSADFRYGRRLHCNAVKAGGADGFVMN-----CLV 164
Query: 462 DMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLN 521
DMYAK G + A +VF I R +V W +++ G +G A L +++++ + + +
Sbjct: 165 DMYAKAGDLENARKVFDRILGR--NVVSWTSMLSGCLQNGFAEEGLALFNEMREERVLPS 222
Query: 522 SITFIGVLSTCCHAGLVDLGERYFKS-MKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEV 580
T VL C G + G S +K P + ++D+ + G++EDA +
Sbjct: 223 EYTMASVLMACTMLGSLHQGRWVHGSVIKHGMVFNPFIT--AAVLDMYVKCGEVEDARRL 280
Query: 581 IRSMPMKADVVIWGTLLAASRIHGN 605
+ D+V+W T++ +G+
Sbjct: 281 FDELGF-VDLVLWTTMIVGYTQNGS 304
>gi|125563252|gb|EAZ08632.1| hypothetical protein OsI_30906 [Oryza sativa Indica Group]
Length = 755
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 189/618 (30%), Positives = 308/618 (49%), Gaps = 32/618 (5%)
Query: 54 LESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFD 113
LE N I + + G ++ A+ +F + N M++GY N RL A +F
Sbjct: 34 LEPEVIRSNKAITAHMRAGRVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLFR 93
Query: 114 KTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWE 173
P SY +++ A + +A +F +M + + VT +ISS +
Sbjct: 94 AIPRPDNYSYNTLLHALAVSSSLADARGLFDEM----PVRDSVTYNVMISSHAN------ 143
Query: 174 CRMLHGLV------IKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVM 227
HGLV L + + +L Y + EAR LF+ E + +SWN +
Sbjct: 144 ----HGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDAISWNAL 199
Query: 228 LNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPND 287
++G+ + G + ARELF+R+P +DVVSW M+ GY + + EA ++ D D
Sbjct: 200 MSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLF-----DAAPVRD 254
Query: 288 VMI-VDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFE 346
V ++S + E ++ + + ++ + A I ++ A+ F
Sbjct: 255 VFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRM----MDEAKELFN 310
Query: 347 LGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALEL 406
+ ++ASWN ++ G+ + GM+E+A+ +F+ M ++D SW+AM++ Y+Q L+L
Sbjct: 311 MMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQL 370
Query: 407 FHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAK 466
F M G N V A L+ G H ++ + + A++ MY K
Sbjct: 371 FIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFK 430
Query: 467 CGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFI 526
CG++ A F + +R V WN +I G A HG L+I+ + + K + IT +
Sbjct: 431 CGNMEDARNAFEEMEER--DVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLV 488
Query: 527 GVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPM 586
GVL+ C H+GLV+ G YF SM + V +HY CM+DLLGRAG+L +A ++++ MP
Sbjct: 489 GVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPF 548
Query: 587 KADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSI 646
+ D +WG LL ASRIH N E+G AA+ + L+P + VLLSNIYA +G+W DA +
Sbjct: 549 EPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYASSGKWRDARKM 608
Query: 647 RKEMRDCGMKRLPGFSGV 664
R M + G+K++PGFS +
Sbjct: 609 RVMMEERGVKKVPGFSWI 626
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 124/521 (23%), Positives = 216/521 (41%), Gaps = 105/521 (20%)
Query: 49 IFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMIS----------- 97
+F++ + + N+L++ A ++ A+ +FD D V N+MIS
Sbjct: 91 LFRAIPRPDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISSHANHGLVSLA 150
Query: 98 --------------------GYIRNDR-------------------------------LN 106
Y+RN R ++
Sbjct: 151 RHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDAISWNALMSGYVQWGKMS 210
Query: 107 DAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSV 166
+ARE+FD+ P + VS+ M+ G+A+ EA +F + V T +V+S
Sbjct: 211 EARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFDAAPVRDVF----TWTAVVSGYA 266
Query: 167 HLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNV 226
G + E R V M + + ++ Y + EA+ LF+ M RN+ SWN
Sbjct: 267 QNGMLEEARR----VFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMMPCRNVASWNT 322
Query: 227 MLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPN 286
ML G+A+AG++E A+ +F+ +P KD VSW M+ Y Q E L ++ M G N
Sbjct: 323 MLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVN 382
Query: 287 DVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFE 346
++S C A G+Q+H +++AG+ F+ ++ Y CG + AR FE
Sbjct: 383 RSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFE 442
Query: 347 LGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALEL 406
+ + SWN +IAG+ R+G ++ ALE+
Sbjct: 443 EMEERDVVSWNTMIAGYARHGFGKE-------------------------------ALEI 471
Query: 407 FHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNN--SITLNDNLSAAIIDMY 464
F M KP++IT+V V A + SG +++G ++ Y +++ +T +ID+
Sbjct: 472 FDMMRTTSTKPDDITLVGVLAACSHSGLVEKG-ISYFYSMHHDFGVTAKPEHYTCMIDLL 530
Query: 465 AKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANL 505
+ G + A ++ + S W A++ +H + L
Sbjct: 531 GRAGRLAEAHDLMKDMPFEPDSTM-WGALLGASRIHRNPEL 570
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 95/394 (24%), Positives = 172/394 (43%), Gaps = 67/394 (17%)
Query: 49 IFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDA 108
+F + E N N+++ Y + ++ +AK +F+ + + N M++GY + L +A
Sbjct: 277 VFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFNMMPCRNVASWNTMLTGYAQAGMLEEA 336
Query: 109 REVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHL 168
+ VFD P K VS+ +M+ ++Q C E L++F +M G N A V+S+ +
Sbjct: 337 KAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADI 396
Query: 169 GGIWECRM-LHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVM 227
+ EC M LHG +I+ + LL MY C ++ +AR+ F+EM+ER++VSWN M
Sbjct: 397 AAL-ECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTM 455
Query: 228 LNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPND 287
+ G+A+ G + EAL ++ M P+D
Sbjct: 456 IAGYARHGFGK-------------------------------EALEIFDMMRTTSTKPDD 484
Query: 288 VMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFEL 347
+ +V +++AC HS +V+ G I +FY+ + +
Sbjct: 485 ITLVGVLAACS-----------HSGLVEKG----------ISYFYS---------MHHDF 514
Query: 348 GIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ-KRDVYSWSAMISGYAQNEQPNMALEL 406
G+ + +I R G + +A L +M + D W A++ + P +
Sbjct: 515 GVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSA 574
Query: 407 FHGMVDAGVKPNEITMVSVFCAI-ASSGTLKEGR 439
+ + ++P M + I ASSG ++ R
Sbjct: 575 AEKIFE--LEPENAGMYVLLSNIYASSGKWRDAR 606
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 95/229 (41%), Gaps = 41/229 (17%)
Query: 25 ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSC 84
A L C+ A+ G Q+H + ++G F+ N+L+ +Y KCG + A++ F+
Sbjct: 385 AFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEM 444
Query: 85 STLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFR 144
D V+ N MI+GY R+ GF +EALE+F
Sbjct: 445 EERDVVSWNTMIAGYARH--------------------------GFG-----KEALEIFD 473
Query: 145 DMRILGVIPNEVTLASVISSSVHLG----GI-WECRMLHGLVIKLMIDGFVIISTNLLNM 199
MR P+++TL V+++ H G GI + M H + + + T ++++
Sbjct: 474 MMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHY----TCMIDL 529
Query: 200 YCVCSSLVEARSLFDEMK-ERNIVSWNVMLNGFAKAGLVELARELFERI 247
L EA L +M E + W +L EL R E+I
Sbjct: 530 LGRAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKI 578
>gi|168068035|ref|XP_001785902.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662428|gb|EDQ49285.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 908
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 196/622 (31%), Positives = 306/622 (49%), Gaps = 100/622 (16%)
Query: 43 QQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRN 102
+++H K+G S+ + N+LI++YAKCG I
Sbjct: 254 KEVHKHAGKAGFISDLRVGNALIHMYAKCGSI---------------------------- 285
Query: 103 DRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVI 162
+DAR VFD + +S+ +MI G AQN C EA +F M+ G +P+ T S++
Sbjct: 286 ---DDARLVFDGMCDRDVISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLL 342
Query: 163 SSSVHLGGIWE-CRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNI 221
++ V G WE + +H +++ + + + + ++MY C S+ +A+ +FD++ R
Sbjct: 343 NTHVSTGA-WEWVKEVHKHAVEVGLVSDLRVGSAFVHMYIRCGSIDDAQLIFDKLAVR-- 399
Query: 222 VSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCD 281
+V +W MI G Q + EAL+++ M +
Sbjct: 400 -----------------------------NVTTWNAMIGGVAQQKCGREALSLFLQMRRE 430
Query: 282 GIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDF-IQATIIHFYAACGRINL 340
G P+ V+++SA A ++HS + AG D + ++H YA CG
Sbjct: 431 GFFPDATTFVNILSANVGEEALEWVKEVHSYAIDAGL--VDLRVGNALVHMYAKCG---- 484
Query: 341 ARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQP 400
N M A+Q+F++M +R+V +W+ MISG AQ+
Sbjct: 485 -------------------------NTMY--AKQVFDDMVERNVTTWTVMISGLAQHGCG 517
Query: 401 NMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAI 460
+ A LF M+ G+ P+ T VS+ A AS+G L+ + H + +N + + + A+
Sbjct: 518 HEAFSLFLQMLREGIVPDATTYVSILSACASTGALEWVKEVHSHAVNAGLVSDLRVGNAL 577
Query: 461 IDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKL 520
+ MYAKCGS++ A VF + +R V W +I GLA HG L ++ ++ K
Sbjct: 578 VHMYAKCGSVDDARRVFDDMLER--DVYSWTVMIGGLAQHGRGLDALDLFVKMKLEGFKP 635
Query: 521 NSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEV 580
N +F+ VLS C HAGLVD G R F S+ Y +EP ++HY CMVDLLGRAGQLE+A+
Sbjct: 636 NGYSFVAVLSACSHAGLVDEGRRQFLSLTQDYGIEPTMEHYTCMVDLLGRAGQLEEAKHF 695
Query: 581 IRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRW 640
I +MP++ WG LL A +GN+E+ E AAK L+P + VLLSNIYA G W
Sbjct: 696 ILNMPIEPGDAPWGALLGACVTYGNLEMAEFAAKERLKLKPKSASTYVLLSNIYAATGNW 755
Query: 641 EDAFSIRKEMRDCGMKRLPGFS 662
E +R M+ G+++ PG S
Sbjct: 756 EQKLLVRSMMQRRGIRKEPGRS 777
Score = 176 bits (445), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 144/589 (24%), Positives = 254/589 (43%), Gaps = 110/589 (18%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E+ +S L+ C + +++ G++IH+ I +SG +S+ ++ +L+N+Y KCG I A+ +F
Sbjct: 30 EITYLSILKACCSPVSLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIDDAQLIF- 88
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
DK + +S+T MI G A +EA
Sbjct: 89 ------------------------------DKMVERNVISWTVMIGGLAHYGRGQEAFHR 118
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
F M+ G IPN T S+++++ G + + +H + + + + L++MY
Sbjct: 119 FLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAK 178
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
S+ +AR +FD M ER+I SW VM+ G A+ G + A LF
Sbjct: 179 SGSIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLF------------------ 220
Query: 263 LQVERLSEALTMYRAMLCDGIAPNDVMIVDLI--SACGRAMAFGEGLQIHSIIVKAGFDC 320
LQ+ER G PN + ++ SA A ++H KAGF
Sbjct: 221 LQMER-------------GGCLPNLTTYLSILNASAITSTGALEWVKEVHKHAGKAGFIS 267
Query: 321 YDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ 380
+ +IH YA CG I+ ARL F+ + SWNA+I G +NG +A +F MQ
Sbjct: 268 DLRVGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMIGGLAQNGCGHEAFTIFLKMQ 327
Query: 381 KRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRW 440
+ G P+ T +S+ S+G + +
Sbjct: 328 QE-------------------------------GFVPDSTTYLSLLNTHVSTGAWEWVKE 356
Query: 441 AHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMH 500
H++ + + + + +A + MY +CGSI+ A +F + R +V+ WNA+I G+A
Sbjct: 357 VHKHAVEVGLVSDLRVGSAFVHMYIRCGSIDDAQLIFDKLAVR--NVTTWNAMIGGVAQQ 414
Query: 501 GDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVE----- 555
L ++ + + ++ TF+ +LS ++GE + +K V++
Sbjct: 415 KCGREALSLFLQMRREGFFPDATTFVNILSA-------NVGEEALEWVKEVHSYAIDAGL 467
Query: 556 PDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHG 604
DL+ +V + + G A++V M ++ +V W +++ HG
Sbjct: 468 VDLRVGNALVHMYAKCGNTMYAKQVFDDM-VERNVTTWTVMISGLAQHG 515
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 126/476 (26%), Positives = 215/476 (45%), Gaps = 68/476 (14%)
Query: 126 MIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLM 185
MI G+A+ +A++V+ MR G PNE+T S++ + + + +H +I+
Sbjct: 1 MIGGYAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSG 60
Query: 186 IDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFE 245
V + T L+NMY C S+ +A+ +FD+M ERN++SW VM+ G A G +E F
Sbjct: 61 FQSDVRVETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYG---RGQEAFH 117
Query: 246 RIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGE 305
R +LQ++R +G PN V +++A A A
Sbjct: 118 R---------------FLQMQR-------------EGFIPNSYTYVSILNANASAGALEW 149
Query: 306 GLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIR 365
++HS V AG + ++H YA G I+ AR+ F+ ++ I SW +I G +
Sbjct: 150 VKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMVERDIFSWTVMIGGLAQ 209
Query: 366 NGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSV 425
+G ++A LF M++ G PN T +S+
Sbjct: 210 HGRGQEAFSLFLQMER-------------------------------GGCLPNLTTYLSI 238
Query: 426 F--CAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDR 483
AI S+G L+ + H++ + + A+I MYAKCGSI+ A VF + DR
Sbjct: 239 LNASAITSTGALEWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMCDR 298
Query: 484 TTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGER 543
V WNA+I GLA +G + I+ +++ +S T++ +L+T G + +
Sbjct: 299 --DVISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKE 356
Query: 544 YFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAA 599
K V + DL+ V + R G ++DA+ + + ++ +V W ++
Sbjct: 357 VHKHAVEV-GLVSDLRVGSAFVHMYIRCGSIDDAQLIFDKLAVR-NVTTWNAMIGG 410
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 98/404 (24%), Positives = 174/404 (43%), Gaps = 44/404 (10%)
Query: 258 MIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAG 317
MI GY + +A+ +Y M +G PN++ + ++ AC ++ G +IH+ I+++G
Sbjct: 1 MIGGYAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSG 60
Query: 318 FDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFN 377
F ++ +++ Y CG I+ DA+ +F+
Sbjct: 61 FQSDVRVETALVNMYVKCGSID-------------------------------DAQLIFD 89
Query: 378 NMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKE 437
M +R+V SW+ MI G A + A F M G PN T VS+ A AS+G L+
Sbjct: 90 KMVERNVISWTVMIGGLAHYGRGQEAFHRFLQMQREGFIPNSYTYVSILNANASAGALEW 149
Query: 438 GRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGL 497
+ H + +N + L+ + A++ MYAK GSI+ A VF + +R + W +I GL
Sbjct: 150 VKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMVER--DIFSWTVMIGGL 207
Query: 498 AMHGDANLTLKIYSDLEKRNIKLNSITFIGVL--STCCHAGLVDLGERYFKSMKSVYNVE 555
A HG ++ +E+ N T++ +L S G ++ + K +
Sbjct: 208 AQHGRGQEAFSLFLQMERGGCLPNLTTYLSILNASAITSTGALEWVKEVHKHAGKAGFI- 266
Query: 556 PDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKS 615
DL+ ++ + + G ++DA V M + DV+ W ++ +G G A
Sbjct: 267 SDLRVGNALIHMYAKCGSIDDARLVFDGMCDR-DVISWNAMIGGLAQNG---CGHEAFTI 322
Query: 616 LAGLQPS----HGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGM 655
+Q + + L N + G WE + K + G+
Sbjct: 323 FLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKEVHKHAVEVGL 366
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 91/216 (42%), Gaps = 33/216 (15%)
Query: 27 VSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCST 86
VS L C++ A+ +++HS +GL S+ + N+L+++YAKCG + A+ +FD
Sbjct: 540 VSILSACASTGALEWVKEVHSHAVNAGLVSDLRVGNALVHMYAKCGSVDDARRVFDDMLE 599
Query: 87 LDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDM 146
D + +MI G ++ R D AL++F M
Sbjct: 600 RDVYSWTVMIGGLAQHGRGLD-------------------------------ALDLFVKM 628
Query: 147 RILGVIPNEVTLASVISSSVHLGGIWEC-RMLHGLVIKLMIDGFVIISTNLLNMYCVCSS 205
++ G PN + +V+S+ H G + E R L I+ + T ++++
Sbjct: 629 KLEGFKPNGYSFVAVLSACSHAGLVDEGRRQFLSLTQDYGIEPTMEHYTCMVDLLGRAGQ 688
Query: 206 LVEARSLFDEMK-ERNIVSWNVMLNGFAKAGLVELA 240
L EA+ M E W +L G +E+A
Sbjct: 689 LEEAKHFILNMPIEPGDAPWGALLGACVTYGNLEMA 724
>gi|359483532|ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 824
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 187/671 (27%), Positives = 328/671 (48%), Gaps = 89/671 (13%)
Query: 11 NSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAK 70
S K +L+ Y S L+ C+ ++ G++IHS+I + +E + + + L+ +Y
Sbjct: 93 QSPKPDLELRTY----CSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVT 148
Query: 71 CGLISQAKSMFDSCSTLDPVACNIMISGYIRND------------------RLNDAREVF 112
CG + + + +FD + N++++GY + R+ AR++F
Sbjct: 149 CGDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLF 208
Query: 113 DKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIW 172
D+ + +S+ SMI G+ N + L++F M +LG+ + T+ SV++ + G +
Sbjct: 209 DELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSNTGMLL 268
Query: 173 ECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFA 232
R LHG IK + ++ LL+MY +L A +F+ M ER++VSW M+ G+A
Sbjct: 269 LGRALHGYAIKASFGKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYA 328
Query: 233 KAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVD 292
+ GL +++ LF + +GI+P+ I
Sbjct: 329 REGLSDMSVRLFHEMEK-------------------------------EGISPDIFTITT 357
Query: 293 LISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQF-ELGIKD 351
++ AC G +H+ I + F+ ++ YA CG + A F E+ +KD
Sbjct: 358 ILHACACTGLLENGKDVHNYIKENKMQSDLFVSNALMDMYAKCGSMGDAHSVFSEMQVKD 417
Query: 352 HIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMV 411
I SWN +I G+ +N + +A LF MQ
Sbjct: 418 -IVSWNTMIGGYSKNSLPNEALNLFVEMQYNS---------------------------- 448
Query: 412 DAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSIN 471
KPN ITM + A AS L+ G+ H ++L N +L+ +++ A++DMY KCG++
Sbjct: 449 ----KPNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALG 504
Query: 472 TAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLST 531
A +F I ++ + W +I G MHG + + ++++ I+ + ++FI +L
Sbjct: 505 LARLLFDMIPEK--DLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYA 562
Query: 532 CCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVV 591
C H+GL+D G +F M++ +EP +HY C+VDLL RAG L A + I+ MP++ D
Sbjct: 563 CSHSGLLDEGWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDAT 622
Query: 592 IWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMR 651
IWG LL RI+ +V++ E+ A+ + L+P + VLL+NIYA+A +WE+ +R+ +
Sbjct: 623 IWGALLCGCRIYHDVKLAEKVAEHVFELEPENTGYYVLLANIYAEAEKWEEVKKLRERIG 682
Query: 652 DCGMKRLPGFS 662
G+++ PG S
Sbjct: 683 RRGLRKNPGCS 693
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 62/320 (19%), Positives = 121/320 (37%), Gaps = 89/320 (27%)
Query: 330 HFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSA 389
+ Y +C I + L E I I +N I F G + A +L N
Sbjct: 46 NLYHSCATIGTSVLPSET-IDCKITDYNIEICRFCELGNLRRAMELIN------------ 92
Query: 390 MISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNS 449
Q+ +P++ L T SV A ++++GR H + +N
Sbjct: 93 ------QSPKPDLELR---------------TYCSVLQLCADLKSIQDGRRIHSIIQSND 131
Query: 450 ITLNDNLSAAIIDMYAKCGS---------------------------------------- 469
+ ++ L + ++ MY CG
Sbjct: 132 VEVDGVLGSKLVFMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRESLSLFK 191
Query: 470 ---------INTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKL 520
+ +A ++F + DR V WN++I G +G + L ++ + I
Sbjct: 192 RMRELGIRRVESARKLFDELGDR--DVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINT 249
Query: 521 NSITFIGVLSTCCHAGLVDLGER-YFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEE 579
+ T + V++ C + G++ LG + ++K+ + E L + C++D+ ++G L A +
Sbjct: 250 DLATMVSVVAGCSNTGMLLLGRALHGYAIKASFGKELTLNN--CLLDMYSKSGNLNSAIQ 307
Query: 580 VIRSMPMKADVVIWGTLLAA 599
V +M ++ VV W +++A
Sbjct: 308 VFETMGERS-VVSWTSMIAG 326
>gi|357517181|ref|XP_003628879.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522901|gb|AET03355.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 633
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 200/647 (30%), Positives = 318/647 (49%), Gaps = 90/647 (13%)
Query: 38 AVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAK---SMFDSCSTLDPVACNI 94
+ Q QI++ I +G +N + +L YA ++F + D N
Sbjct: 26 TMQQAHQIYAHIIVTGRHNNLHLSTTLFTFYASSSSSQSLHHSHTLFTQITNPDIFLWNA 85
Query: 95 MISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPN 154
+I Y S I Q+ +F+ M V+P+
Sbjct: 86 IIKAY-------------------------SQIHSPPQH-----PFSLFKTMLNSSVLPD 115
Query: 155 EVTL-------ASVISSSVHLGGIWECRMLHGLVIKLMIDGF---VIISTNLLNMYCVCS 204
T A+V+ S+ G C +L +GF V ++ LLN YC
Sbjct: 116 SFTFPFLLKACANVLISAPQFGFQVHCHVLR--------NGFGSDVFVNNALLNFYCGFG 167
Query: 205 SLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQ 264
+V A +FDE R D VS+ TMI+G+ +
Sbjct: 168 DVVNAYKVFDESFVR-------------------------------DCVSFNTMINGFAR 196
Query: 265 VERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD-- 322
+S ++ M + P++ V L+S C + G Q+H ++ + C+
Sbjct: 197 KGDVSGCFRVFGEMRGVCVRPDEYTFVALLSGCSVLEDYRIGRQVHGLVYRE-LGCFGGN 255
Query: 323 -FIQATIIHFYAACGRINLAR--LQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNM 379
+ ++ YA CGR+ +A L K +A+W +L++ + G ++ AR+LF+ M
Sbjct: 256 VLLVNKLVDMYAKCGRLVMAETVLSVVKPGKSVVAAWTSLVSAYALRGEVKVARRLFDQM 315
Query: 380 QKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGR 439
+RDV SW+AMISGY+ ALELF + G+KP+E+ +V+ A A G L+ GR
Sbjct: 316 GERDVVSWTAMISGYSHAGCFQEALELFVKLEGLGMKPDEVAVVAALSACARLGALELGR 375
Query: 440 WAH-EYVLNN-SITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGL 497
H +Y N + ++N ++A++DMYAKCGSI+ A +VF D + +N+II GL
Sbjct: 376 RIHRQYAGENWTCSINRGFTSAVVDMYAKCGSIDIALDVFRKTSDDKKTTFLYNSIISGL 435
Query: 498 AMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPD 557
A HG ++ ++ +K ++ITF+ VLS C H GLVD G++ F+SM +VY V P+
Sbjct: 436 AHHGRGEYAKNLFEEMGLLGLKPDNITFVAVLSACGHCGLVDFGKKLFESMFTVYGVSPE 495
Query: 558 LKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLA 617
++HYGCMVDLLGRAG L++A +I MP KA+ VIW LL+A ++HG+V + A+ L
Sbjct: 496 MEHYGCMVDLLGRAGHLDEAHRLILKMPFKANAVIWRALLSACKVHGDVALARVASYELV 555
Query: 618 GLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
LQ HG V+LSN+ +D + ++A S+RK + + G+++ PG+S V
Sbjct: 556 ELQHDHGAGYVMLSNMLSDTDQHDEAASLRKAIDNVGIQKPPGWSYV 602
>gi|297838665|ref|XP_002887214.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333055|gb|EFH63473.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 740
Score = 306 bits (784), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 182/638 (28%), Positives = 327/638 (51%), Gaps = 39/638 (6%)
Query: 28 SALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTL 87
+ ++ C A + IH I ++ TF+ N++++ YA A+ +FD
Sbjct: 8 AQIKQCIGLGASRHVKMIHGNIIRTLPHPETFLHNNIVHAYALIRSSIYARRVFDGIPQP 67
Query: 88 DPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDM- 146
+ + N ++ Y ++ L++ F+K P + V++ +I G++ + A++ + M
Sbjct: 68 NLFSWNNLLLAYSKSGHLSEMERTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMM 127
Query: 147 RILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSL 206
+ VTL +++ S G + + +HG VIKL + ++++ + LL+MY +
Sbjct: 128 KDFSSNLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLDMYSKVGCI 187
Query: 207 VEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVE 266
+A+ +F + +RN V +N ++ G G++E A +LF R KD VSW MI G Q
Sbjct: 188 SDAKKVFYGLDDRNTVMYNTLMGGLLACGMIEDALQLF-RGMEKDSVSWSAMIKGLAQNG 246
Query: 267 RLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQA 326
EA+ +R M +G+ + ++ ACG A +G QIH+ I+
Sbjct: 247 MEKEAIECFREMKIEGLKMDQYPFGSVLPACGGLGAINDGRQIHACII------------ 294
Query: 327 TIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYS 386
R NL +DHI +ALI + + + A+ +F+ M++++V S
Sbjct: 295 ----------RTNL---------QDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVS 335
Query: 387 WSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVL 446
W+AM+ GY Q + A+++F M +G+ P+ T+ A A+ +L+EG H +
Sbjct: 336 WTAMVVGYGQTGRAGEAVKIFLDMQRSGIDPDHYTLGQAISACANISSLEEGSQFHGKAI 395
Query: 447 NNSITLNDNLSAAIIDMYAKCGSINTAFEVF--YHIRDRTTSVSPWNAIICGLAMHGDAN 504
+ +S +++ +Y KCG I+ + +F ++RD + W A++ A G A
Sbjct: 396 TAGLIHYITVSNSLVTLYGKCGDIDDSTRLFNEMNVRDEVS----WTAMVSAYAQFGRAV 451
Query: 505 LTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCM 564
++++ + + +K + +T GV+S C AGLV+ G+RYF+ M + Y + P HY CM
Sbjct: 452 EAIQLFDKMVQLGLKPDGVTLTGVISACSRAGLVEKGQRYFELMINEYGIVPSNGHYSCM 511
Query: 565 VDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHG 624
+DL R+G++E+A I MP + D + W TLL+A R GN+E+G+ AA+SL L P H
Sbjct: 512 IDLFSRSGRIEEAMGFINGMPFRPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHP 571
Query: 625 PSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
LLS+IYA G+W+ +R+ M++ +++ PG S
Sbjct: 572 AGYTLLSSIYASKGKWDCVAQLRRGMKEKNVRKEPGQS 609
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 124/466 (26%), Positives = 225/466 (48%), Gaps = 66/466 (14%)
Query: 10 FNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYA 69
+N+ + ++ + L++ L+ S++ VS G+QIH + K G ES + + L+++Y+
Sbjct: 123 YNTMMKDFSSNLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLDMYS 182
Query: 70 KCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMG 129
K G IS AK +F + V N ++ G + + DA ++F K VS+++MI G
Sbjct: 183 KVGCISDAKKVFYGLDDRNTVMYNTLMGGLLACGMIEDALQLFRGME-KDSVSWSAMIKG 241
Query: 130 FAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGF 189
AQN +EA+E FR+M+I G+ ++ SV+ + LG I + R +H +I+ +
Sbjct: 242 LAQNGMEKEAIECFREMKIEGLKMDQYPFGSVLPACGGLGAINDGRQIHACIIRTNLQDH 301
Query: 190 VIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPS 249
+ + + L++MYC C L A+++FD MK++N+VSW M+ G+ + G
Sbjct: 302 IYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTG-------------- 347
Query: 250 KDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQI 309
R EA+ ++ M GI P+ + ISAC + EG Q
Sbjct: 348 -----------------RAGEAVKIFLDMQRSGIDPDHYTLGQAISACANISSLEEGSQF 390
Query: 310 HSIIVKAGFDCYDFIQATIIHFYAACGRI-NLARLQFELGIKDHIASWNALIAGFIRNGM 368
H + AG Y + +++ Y CG I + RL E+ ++D + SW A+++ + + G
Sbjct: 391 HGKAITAGLIHYITVSNSLVTLYGKCGDIDDSTRLFNEMNVRDEV-SWTAMVSAYAQFGR 449
Query: 369 IEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCA 428
+A QLF+ MV G+KP+ +T+ V A
Sbjct: 450 AVEAIQLFDK-------------------------------MVQLGLKPDGVTLTGVISA 478
Query: 429 IASSGTLKEGRWAHEYVLNN-SITLNDNLSAAIIDMYAKCGSINTA 473
+ +G +++G+ E ++N I ++ + +ID++++ G I A
Sbjct: 479 CSRAGLVEKGQRYFELMINEYGIVPSNGHYSCMIDLFSRSGRIEEA 524
>gi|297740136|emb|CBI30318.3| unnamed protein product [Vitis vinifera]
Length = 861
Score = 306 bits (784), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 207/716 (28%), Positives = 340/716 (47%), Gaps = 100/716 (13%)
Query: 10 FNSQKANLQNSDYELALVSALR------YCSAHIA---VSQGQQIHSLIFKSGLESNTFI 60
F NL N + E + L+ Y SA + ++Q +Q+H+ G+ N +
Sbjct: 56 FRQTSLNLHNREEESSKFHFLQRLNPKFYISALVNCRNLTQVRQVHAQASVHGMLENIVV 115
Query: 61 QNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISG---------------------- 98
N LI Y+ + A +FD D V+ ++M+ G
Sbjct: 116 ANKLIYFYSYYRALDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYINCFGTFRELIRCGA 175
Query: 99 ---------------------------YIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFA 131
Y++ + DAR +FDK + V++T MI G+A
Sbjct: 176 RPDNYTLPFVIRACRDLKNLQMALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYA 235
Query: 132 QNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVI 191
+ E+L +F MR GV+P++V + +V+ + LG + + R++ + + VI
Sbjct: 236 ECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVI 295
Query: 192 ISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKD 251
+ T +++MY AK G VE ARE+F+R+ K+
Sbjct: 296 LGTAMIDMY-------------------------------AKCGCVESAREIFDRMEEKN 324
Query: 252 VVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHS 311
V+SW MI Y + +AL ++R ML G+ P+ + + L+ AC + Q+H+
Sbjct: 325 VISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACINCRNLTQVRQVHA 384
Query: 312 IIVKAGFDCYDFIQATIIHFYAACGRINLARLQFE-LGIKDHIASWNALIAGFIRNGMIE 370
G + ++HFY+ ++ A F+ + ++D + SW+ ++ GF + G
Sbjct: 385 QASVHGMLQNLIVANKLVHFYSYYRALDDAYGLFDGMCVRDSV-SWSVMVGGFAKVG--- 440
Query: 371 DARQLFNNMQKRDVYSWSAMISGYAQN--EQPNMALELFHGMVDAGVKPNEITMVSVFCA 428
D F R++ A Y N +L LF M + GV P+++ MV+V A
Sbjct: 441 DYMNCFGTF--RELIRCGARPDNYTLPFCGNANESLVLFDKMREEGVVPDKVAMVTVVFA 498
Query: 429 IASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVS 488
A G + + R +Y+ L+ L A+IDM+AKCG + +A E+F + ++ +V
Sbjct: 499 CAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEK--NVI 556
Query: 489 PWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSM 548
W+A+I HG L ++ + + I N IT + +L C HAGLV+ G R+F M
Sbjct: 557 SWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSLM 616
Query: 549 KSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEV 608
Y+V D+KHY C+VDLLGRAG+L++A ++I SM ++ D +WG L A R H +V +
Sbjct: 617 WEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESMTVEKDEGLWGAFLGACRTHKDVVL 676
Query: 609 GERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
E+AA SL LQP + +LLSNIYA+AGRWED R M +K++PG++ +
Sbjct: 677 AEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKTRDLMSQRRLKKIPGWTWI 732
>gi|108707831|gb|ABF95626.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125586055|gb|EAZ26719.1| hypothetical protein OsJ_10627 [Oryza sativa Japonica Group]
Length = 798
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 194/604 (32%), Positives = 302/604 (50%), Gaps = 49/604 (8%)
Query: 62 NSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCV 121
N+ I A+ G I A++ F++ + N +++GY RN + A +F + P +
Sbjct: 21 NARIAHLARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLA 80
Query: 122 SYTSMIMGFAQNDCWREAL-EVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGL 180
SY ++I G + R+ L + + + P+ V+ S++ V G + + L
Sbjct: 81 SYNALISGLSLR---RQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRL--- 134
Query: 181 VIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELA 240
+ M + + T LL + EAR LFDEM +R++V+W ML+G+ +AG + A
Sbjct: 135 -FQQMPERNHVSYTVLLGGLLDAGRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRITEA 193
Query: 241 RELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRA 300
R LF+ +P ++VVSW MI GY Q ++ A ++ M M+V I A G
Sbjct: 194 RALFDEMPKRNVVSWTAMISGYAQNGEVNLARKLFEVMPERNEVSWTAMLVGYIQA-GHV 252
Query: 301 MAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALI 360
D + A H AAC NA++
Sbjct: 253 E-----------------DAAELFNAMPEHPVAAC---------------------NAMM 274
Query: 361 AGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEI 420
GF + GM++ A+ +F M +RD +WSAMI Y QNE AL F M+ GV+PN
Sbjct: 275 VGFGQRGMVDAAKTVFEKMCERDDGTWSAMIKAYEQNEFLMEALSTFREMLWRGVRPNYP 334
Query: 421 TMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHI 480
+++S+ A+ L GR H +L S ++ +A+I MY KCG+++ A VF+
Sbjct: 335 SVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTF 394
Query: 481 RDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDL 540
+ + WN++I G A HG L I+ D+ + + IT+IG L+ C + G V
Sbjct: 395 EPKDIVM--WNSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYIGALTACSYTGKVKE 452
Query: 541 GERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAAS 600
G F SM ++ P +HY CMVDLLGR+G +E+A ++I++MP++ D VIWG L+ A
Sbjct: 453 GREIFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGAC 512
Query: 601 RIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPG 660
R+H N E+ E AAK L L+P + VLLS+IY GRWEDA +RK + + + PG
Sbjct: 513 RMHRNAEIAEFAAKKLLELEPGNAGPYVLLSHIYTSVGRWEDASKMRKFISSRNLNKSPG 572
Query: 661 FSGV 664
S +
Sbjct: 573 CSWI 576
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 135/508 (26%), Positives = 243/508 (47%), Gaps = 47/508 (9%)
Query: 35 AHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNI 94
AH+A + + F++ T N+L+ Y + L A +F + D + N
Sbjct: 25 AHLARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLASYNA 84
Query: 95 MISGY-IRNDRLNDAREVFDKTPIK-CCVSYTSMIMGFAQNDCWREALEVFRDMRILGVI 152
+ISG +R L DA P VS+TS++ G+ ++ +A+ +F+ M
Sbjct: 85 LISGLSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQMPER--- 141
Query: 153 PNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSL 212
N V+ ++ + G + E R L M D V+ T +L+ YC + EAR+L
Sbjct: 142 -NHVSYTVLLGGLLDAGRVNEARRL----FDEMPDRDVVAWTAMLSGYCQAGRITEARAL 196
Query: 213 FDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEAL 272
FDEM +RN+VSW M++G+A+ G V LAR+LFE +P ++ VSW M+ GY+Q + +A
Sbjct: 197 FDEMPKRNVVSWTAMISGYAQNGEVNLARKLFEVMPERNEVSWTAMLVGYIQAGHVEDAA 256
Query: 273 TMYRAMLCDGIAPNDVM--------IVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFI 324
++ AM +A + M +VD M + S ++KA ++ +F+
Sbjct: 257 ELFNAMPEHPVAACNAMMVGFGQRGMVDAAKTVFEKMCERDD-GTWSAMIKA-YEQNEFL 314
Query: 325 QATIIHFYAACGR---------INLARLQFELGIKDH----------------IASWNAL 359
+ F R I++ + L + D+ + + +AL
Sbjct: 315 MEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSAL 374
Query: 360 IAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNE 419
I +I+ G ++ A+++F+ + +D+ W++MI+GYAQ+ AL +FH M AG+ P+
Sbjct: 375 ITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMSPDG 434
Query: 420 ITMVSVFCAIASSGTLKEGRWA-HEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFY 478
IT + A + +G +KEGR + +N+SI + ++D+ + G + AF++
Sbjct: 435 ITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIK 494
Query: 479 HIRDRTTSVSPWNAIICGLAMHGDANLT 506
++ +V W A++ MH +A +
Sbjct: 495 NMPVEPDAVI-WGALMGACRMHRNAEIA 521
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 105/247 (42%), Gaps = 63/247 (25%)
Query: 25 ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSC 84
+++S L C+A + G+++H+ + + + + F ++LI +Y KCG + +AK +F +
Sbjct: 335 SVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTF 394
Query: 85 STLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFR 144
D V N MI+GY AQ+ +AL +F
Sbjct: 395 EPKDIVMWNSMITGY-------------------------------AQHGLGEQALGIFH 423
Query: 145 DMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCS 204
DMR+ G+ P+ +T +++ + G + E R + N V S
Sbjct: 424 DMRLAGMSPDGITYIGALTACSYTGKVKEGR-------------------EIFNSMTVNS 464
Query: 205 SLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIP-SKDVVSWGTMIDGYL 263
S+ ++ M++ ++GLVE A +L + +P D V WG ++ G
Sbjct: 465 SIRPGAE-----------HYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALM-GAC 512
Query: 264 QVERLSE 270
++ R +E
Sbjct: 513 RMHRNAE 519
>gi|356551361|ref|XP_003544044.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Glycine max]
Length = 688
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 185/637 (29%), Positives = 325/637 (51%), Gaps = 74/637 (11%)
Query: 42 GQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIR 101
G+Q+H+ KSG ++ F+ L+ +YA R
Sbjct: 67 GKQLHAHSIKSGFNAHEFVTTKLLQMYA-------------------------------R 95
Query: 102 NDRLNDAREVFDKTPIKCCVSYTSMI-----MGFAQNDCWREALEVFRDMRI---LGVIP 153
N +A VFD P++ S+T+++ MGF + + ++ +R+ V P
Sbjct: 96 NCSFENACHVFDTMPLRNLHSWTALLRVYIEMGFFEEAFFLFEQLLYEGVRVRLDFFVFP 155
Query: 154 NEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLF 213
+ + + + V LG R +HG+ +K DG + A +F
Sbjct: 156 VVLKICCGLCA-VELG-----RQMHGMALKH--DG----------------DMKSAFEMF 191
Query: 214 DEMKERNIVSWNVMLNGFAKAGLVELARELFERIPS----KDVVSWGTMIDGYLQVERLS 269
++ S+N M+ G+ + G + A+ELF+R+ KD +SW +MI GY+
Sbjct: 192 SRFSRKSAASYNAMIAGYWENGNLFKAKELFDRMEQEGVQKDRISWNSMISGYVDGSLFD 251
Query: 270 EALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATII 329
EA +++R +L +GI P+ + +++ C + G + HS+ + G + ++
Sbjct: 252 EAYSLFRDLLKEGIEPDSFTLGSVLAGCADMASIRRGKEAHSLAIVRGLQSNSIVGGALV 311
Query: 330 HFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQK----RDVY 385
Y+ C I A++ F+ + + +WNALI+G+ R E R+L M++ +VY
Sbjct: 312 EMYSKCQDIVAAQMAFDGVSERDLPTWNALISGYARCNQAEKIRELHQKMRRDGFEPNVY 371
Query: 386 SWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYV 445
+W+ +I+GY +N+Q + A++LF M A ++P+ T+ + A + T++ G+ H Y
Sbjct: 372 TWNGIIAGYVENKQYDSAMQLFTEMQIANLRPDIYTVGIILAACSRLATIQRGKQVHAYS 431
Query: 446 LNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANL 505
+ + ++ AA++DMYAKCG + + V+ I + ++ NA++ AMHG
Sbjct: 432 IRAGHDSDVHIGAALVDMYAKCGDVKHCYRVYNMISN--PNLVSHNAMLTAYAMHGHGEE 489
Query: 506 TLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMV 565
+ ++ + ++ + +TF+ VLS+C HAG +++G M + YNV P LKHY CMV
Sbjct: 490 GIALFRRMLASKVRPDHVTFLAVLSSCVHAGSLEIGHECLALMVA-YNVMPSLKHYTCMV 548
Query: 566 DLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGP 625
DLL RAGQL +A E+I+++P +AD V W LL IH V++GE AA+ L L+P++
Sbjct: 549 DLLSRAGQLYEAYELIKNLPTEADAVTWNALLGGCFIHNEVDLGEIAAEKLIELEPNNPG 608
Query: 626 SRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
+ V+L+N+YA AG+W R+ M+D GM++ PG S
Sbjct: 609 NYVMLANLYASAGKWHYLTQTRQLMKDMGMQKRPGCS 645
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 84/360 (23%), Positives = 156/360 (43%), Gaps = 59/360 (16%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
L S L C+ ++ +G++ HSL GL+SN+ + +L+ +Y+KC I A+ FD
Sbjct: 270 FTLGSVLAGCADMASIRRGKEAHSLAIVRGLQSNSIVGGALVEMYSKCQDIVAAQMAFDG 329
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPI----KCCVSYTSMIMGFAQNDCWREA 139
S D N +ISGY R ++ RE+ K ++ +I G+ +N + A
Sbjct: 330 VSERDLPTWNALISGYARCNQAEKIRELHQKMRRDGFEPNVYTWNGIIAGYVENKQYDSA 389
Query: 140 LEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNM 199
+++F +M+I + P+ T+ ++++ L I + +H I+ D V I L++M
Sbjct: 390 MQLFTEMQIANLRPDIYTVGIILAACSRLATIQRGKQVHAYSIRAGHDSDVHIGAALVDM 449
Query: 200 YCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMI 259
Y C + +++ + N+VS N ML +A G E
Sbjct: 450 YAKCGDVKHCYRVYNMISNPNLVSHNAMLTAYAMHGHGE--------------------- 488
Query: 260 DGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFD 319
E + ++R ML + P+ V + ++S+C +H+ ++ G +
Sbjct: 489 ----------EGIALFRRMLASKVRPDHVTFLAVLSSC-----------VHAGSLEIGHE 527
Query: 320 CYDFIQA-----TIIHFYAACGRINLARLQFE-------LGIKDHIASWNALIAG-FIRN 366
C + A ++ H+ ++ A +E L + +WNAL+ G FI N
Sbjct: 528 CLALMVAYNVMPSLKHYTCMVDLLSRAGQLYEAYELIKNLPTEADAVTWNALLGGCFIHN 587
>gi|356574121|ref|XP_003555200.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08305-like [Glycine max]
Length = 548
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 165/479 (34%), Positives = 276/479 (57%), Gaps = 7/479 (1%)
Query: 192 ISTNLLNMYCVCSSLVEARSLFDEM------KERNIVSWNVMLNGFAKAGLVELARELFE 245
IS NLL++ C S++E + L + ++ +S + + + +G + + +F
Sbjct: 13 ISHNLLSLLDKCKSILELKQLHAVVISCGLSQDDPFISKILCFSALSNSGDINYSYRVFS 72
Query: 246 RIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGE 305
++ S + SW T+I GY + ++L+++ ML G+AP+ + L+ A R +
Sbjct: 73 QLSSPTIFSWNTIIRGYSNSKNPIQSLSIFLKMLRLGVAPDYLTYPFLVKASARLLNQET 132
Query: 306 GLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIR 365
G+ +H+ I+K G + FIQ ++IH YAACG A+ F+ + ++ SWN+++ G+ +
Sbjct: 133 GVSVHAHIIKTGHESDRFIQNSLIHMYAACGNSMWAQKVFDSIQQKNVVSWNSMLDGYAK 192
Query: 366 NGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSV 425
G + A++ F +M ++DV SWS++I GY + + + A+ +F M AG K NE+TMVSV
Sbjct: 193 CGEMVMAQKAFESMSEKDVRSWSSLIDGYVKAGEYSEAMAIFEKMQSAGPKANEVTMVSV 252
Query: 426 FCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTT 485
CA A G L++GR ++Y+++N + L L +++DMYAKCG+I A +F + T
Sbjct: 253 SCACAHMGALEKGRMIYKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLIFRRVSKSQT 312
Query: 486 SVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYF 545
V WNA+I GLA HG +LK++ +++ I + +T++ +L+ C H GLV +F
Sbjct: 313 DVLIWNAVIGGLATHGLVEESLKLFKEMQIVGICPDEVTYLCLLAACAHGGLVKEAWFFF 372
Query: 546 KSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGN 605
+S+ S + P +HY CMVD+L RAGQL A + I MP + + G LL+ H N
Sbjct: 373 ESL-SKCGMTPTSEHYACMVDVLARAGQLTTAYQFICQMPTEPTASMLGALLSGCINHRN 431
Query: 606 VEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
+ + E + L L+P+H + LSN+YA RW+DA S+R+ M G+K+ PGFS V
Sbjct: 432 LALAEIVGRKLIELEPNHDGRYIGLSNMYAVDKRWDDARSMREAMERRGVKKSPGFSFV 490
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 124/451 (27%), Positives = 215/451 (47%), Gaps = 40/451 (8%)
Query: 58 TFIQNSLINLYAKCGLISQAKSMFD---SC--STLDPVACNIMISGYIRND-RLNDAREV 111
T I ++L++L KC I + K + SC S DP I+ + N +N + V
Sbjct: 11 TNISHNLLSLLDKCKSILELKQLHAVVISCGLSQDDPFISKILCFSALSNSGDINYSYRV 70
Query: 112 FDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGI 171
F + S+ ++I G++ + ++L +F M LGV P+ +T ++ +S L
Sbjct: 71 FSQLSSPTIFSWNTIIRGYSNSKNPIQSLSIFLKMLRLGVAPDYLTYPFLVKASARLLNQ 130
Query: 172 WECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGF 231
+H +IK + I +L++MY C + + A+ +FD ++++N+VSWN ML+G+
Sbjct: 131 ETGVSVHAHIIKTGHESDRFIQNSLIHMYAACGNSMWAQKVFDSIQQKNVVSWNSMLDGY 190
Query: 232 AKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIV 291
AK G + +A++ FE + KDV SW ++IDGY++ SEA+ ++ M G N+V +V
Sbjct: 191 AKCGEMVMAQKAFESMSEKDVRSWSSLIDGYVKAGEYSEAMAIFEKMQSAGPKANEVTMV 250
Query: 292 DLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKD 351
+ AC A +G I+ IV G +Q +++ YA CG I A L F K
Sbjct: 251 SVSCACAHMGALEKGRMIYKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLIFRRVSKS 310
Query: 352 H--IASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHG 409
+ WNA+I G +G++E++ +LF MQ
Sbjct: 311 QTDVLIWNAVIGGLATHGLVEESLKLFKEMQI---------------------------- 342
Query: 410 MVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGS 469
G+ P+E+T + + A A G +KE + E + +T A ++D+ A+ G
Sbjct: 343 ---VGICPDEVTYLCLLAACAHGGLVKEAWFFFESLSKCGMTPTSEHYACMVDVLARAGQ 399
Query: 470 INTAFEVFYHIRDRTTSVSPWNAIICGLAMH 500
+ TA++ + T+ S A++ G H
Sbjct: 400 LTTAYQFICQMPTEPTA-SMLGALLSGCINH 429
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 88/329 (26%), Positives = 160/329 (48%), Gaps = 36/329 (10%)
Query: 42 GQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIR 101
G +H+ I K+G ES+ FIQNSLI++YA CG A+ +FDS + V+ N M+ GY +
Sbjct: 133 GVSVHAHIIKTGHESDRFIQNSLIHMYAACGNSMWAQKVFDSIQQKNVVSWNSMLDGYAK 192
Query: 102 NDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASV 161
+ A++ F+ K S++S+I G+ + + EA+ +F M+ G NEVT+ SV
Sbjct: 193 CGEMVMAQKAFESMSEKDVRSWSSLIDGYVKAGEYSEAMAIFEKMQSAGPKANEVTMVSV 252
Query: 162 ISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEM--KER 219
+ H+G + + RM++ ++ + +++ T+L++MY C ++ EA +F + +
Sbjct: 253 SCACAHMGALEKGRMIYKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLIFRRVSKSQT 312
Query: 220 NIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAML 279
+++ WN ++ G A GLVE E+L +++ M
Sbjct: 313 DVLIWNAVIGGLATHGLVE-------------------------------ESLKLFKEMQ 341
Query: 280 CDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRIN 339
GI P++V + L++AC E + K G A ++ A G++
Sbjct: 342 IVGICPDEVTYLCLLAACAHGGLVKEAWFFFESLSKCGMTPTSEHYACMVDVLARAGQLT 401
Query: 340 LARLQF--ELGIKDHIASWNALIAGFIRN 366
A QF ++ + + AL++G I +
Sbjct: 402 TA-YQFICQMPTEPTASMLGALLSGCINH 429
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 74/151 (49%), Gaps = 29/151 (19%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E+ +VS C+ A+ +G+ I+ I +GL +Q SL+++YAKCG I +A +F
Sbjct: 246 EVTMVSVSCACAHMGALEKGRMIYKYIVDNGLPLTLVLQTSLVDMYAKCGAIEEALLIFR 305
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
S +++I + ++I G A + E+L++
Sbjct: 306 RVSK---SQTDVLI--------------------------WNAVIGGLATHGLVEESLKL 336
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWE 173
F++M+I+G+ P+EVT ++++ H G + E
Sbjct: 337 FKEMQIVGICPDEVTYLCLLAACAHGGLVKE 367
>gi|357464703|ref|XP_003602633.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491681|gb|AES72884.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 647
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 167/517 (32%), Positives = 278/517 (53%), Gaps = 14/517 (2%)
Query: 158 LASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMK 217
+S+IS+ V + + LH +IK + ++ L+++Y C FD++
Sbjct: 81 FSSLISNCVSAKSLKHGKALHSQLIKTALFFETFLANGLIDLYSKCGCKESIHKAFDDLP 140
Query: 218 ERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRA 277
+ +WN +L+ ++K G+ A +LF+ +P +++VS+ ++I G + E EA+ +R
Sbjct: 141 NKTTRTWNTLLSFYSKKGVFNQAYKLFDEMPQRNLVSYNSLISGLTRHEFHKEAVKFFRE 200
Query: 278 ML--CDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAAC 335
M G+ ++ +V L+S C Q+H + GF + +I Y C
Sbjct: 201 MQNGVGGLMLDEFTLVSLVSNCSCLDTVKWLRQVHGVATIVGFRTNLILNNALIDAYGKC 260
Query: 336 GRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYA 395
G N + F ++ SW +++ + R I+DA ++FN M + SW+A+ISG+
Sbjct: 261 GEPNSSFCLFRSMVEKDAVSWTSMVVTYTRASRIDDACKVFNEMPVKYTVSWAALISGFV 320
Query: 396 QNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSIT---L 452
+N + ALE+FH M+ GV P T VSV A AS + G+ H ++ +
Sbjct: 321 KNGRCYEALEVFHQMIKEGVLPRAQTFVSVLDACASEALIGRGKQVHCQIIRGRSSDNLF 380
Query: 453 NDNLSAAIIDMYAKCGSINTA---FEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKI 509
N + A++DMYAKCG + +A FE+ H++D V WN +I G A +G +L +
Sbjct: 381 NVYVFNALMDMYAKCGDMKSAENLFEMMIHVKD----VVSWNTLITGFAQNGRGEDSLAV 436
Query: 510 YSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLG 569
+ + + NI+ N +TF+GVLS C HAGLV+ G SM+ Y V+P HY ++DLLG
Sbjct: 437 FDRMIESNIEPNHVTFLGVLSACNHAGLVNAGLELLDSMERRYGVKPKSNHYALLIDLLG 496
Query: 570 RAGQLEDAEEVIRSMP--MKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSR 627
R +LE+A +I +P + + +WG +L R+HGN+E+ +AA++L L+P +
Sbjct: 497 RKNRLEEAMCLIEKVPNEISNHIAMWGAVLGGCRVHGNLELARKAAEALFALEPENTGRY 556
Query: 628 VLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
V+LSNIYA +GRW D IR M++ G+K+ P FS +
Sbjct: 557 VMLSNIYAASGRWSDTNRIRNVMKERGLKKEPAFSRI 593
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 131/492 (26%), Positives = 233/492 (47%), Gaps = 45/492 (9%)
Query: 28 SALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTL 87
S + C + ++ G+ +HS + K+ L TF+ N LI+LY+KCG FD
Sbjct: 83 SLISNCVSAKSLKHGKALHSQLIKTALFFETFLANGLIDLYSKCGCKESIHKAFDDLPNK 142
Query: 88 DPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMR 147
N ++S Y + N A ++FD+ P + VSY S+I G +++ +EA++ FR+M+
Sbjct: 143 TTRTWNTLLSFYSKKGVFNQAYKLFDEMPQRNLVSYNSLISGLTRHEFHKEAVKFFREMQ 202
Query: 148 --ILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSS 205
+ G++ +E TL S++S+ L + R +HG+ + +I++ L++ Y C
Sbjct: 203 NGVGGLMLDEFTLVSLVSNCSCLDTVKWLRQVHGVATIVGFRTNLILNNALIDAYGKCGE 262
Query: 206 LVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQV 265
+ LF M E++ VSW M+ + +A ++ A ++F +P K VSW +I G+++
Sbjct: 263 PNSSFCLFRSMVEKDAVSWTSMVVTYTRASRIDDACKVFNEMPVKYTVSWAALISGFVKN 322
Query: 266 ERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAG-----FDC 320
R EAL ++ M+ +G+ P V ++ AC G G Q+H I++ F+
Sbjct: 323 GRCYEALEVFHQMIKEGVLPRAQTFVSVLDACASEALIGRGKQVHCQIIRGRSSDNLFNV 382
Query: 321 YDFIQATIIHFYAACGRINLARLQFELGI--KDHIASWNALIAGFIRNGMIEDARQLFNN 378
Y F ++ YA CG + A FE+ I KD + SWN LI GF +NG ED
Sbjct: 383 YVF--NALMDMYAKCGDMKSAENLFEMMIHVKD-VVSWNTLITGFAQNGRGED------- 432
Query: 379 MQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG 438
+L +F M+++ ++PN +T + V A +G + G
Sbjct: 433 ------------------------SLAVFDRMIESNIEPNHVTFLGVLSACNHAGLVNAG 468
Query: 439 -RWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTS-VSPWNAIICG 496
+ N A +ID+ + + A + + + ++ ++ W A++ G
Sbjct: 469 LELLDSMERRYGVKPKSNHYALLIDLLGRKNRLEEAMCLIEKVPNEISNHIAMWGAVLGG 528
Query: 497 LAMHGDANLTLK 508
+HG+ L K
Sbjct: 529 CRVHGNLELARK 540
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 103/360 (28%), Positives = 165/360 (45%), Gaps = 39/360 (10%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E LVS + CS V +Q+H + G +N + N+LI+ Y KCG + + +F
Sbjct: 212 EFTLVSLVSNCSCLDTVKWLRQVHGVATIVGFRTNLILNNALIDAYGKCGEPNSSFCLFR 271
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
S D V+ M+ Y R R++DA +VF++ P+K VS+ ++I GF +N EALEV
Sbjct: 272 SMVEKDAVSWTSMVVTYTRASRIDDACKVFNEMPVKYTVSWAALISGFVKNGRCYEALEV 331
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIK-LMIDGF--VIISTNLLNM 199
F M GV+P T SV+ + I + +H +I+ D V + L++M
Sbjct: 332 FHQMIKEGVLPRAQTFVSVLDACASEALIGRGKQVHCQIIRGRSSDNLFNVYVFNALMDM 391
Query: 200 YCVCSSLVEARSLFDEMKE-RNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTM 258
Y C + A +LF+ M +++VSWN ++ GFA+ G
Sbjct: 392 YAKCGDMKSAENLFEMMIHVKDVVSWNTLITGFAQNG----------------------- 428
Query: 259 IDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQ-IHSIIVKAG 317
R ++L ++ M+ I PN V + ++SAC A GL+ + S+ + G
Sbjct: 429 --------RGEDSLAVFDRMIESNIEPNHVTFLGVLSACNHAGLVNAGLELLDSMERRYG 480
Query: 318 FDCYDFIQATIIHFYAACGRINLARLQFEL---GIKDHIASWNALIAGFIRNGMIEDARQ 374
A +I R+ A E I +HIA W A++ G +G +E AR+
Sbjct: 481 VKPKSNHYALLIDLLGRKNRLEEAMCLIEKVPNEISNHIAMWGAVLGGCRVHGNLELARK 540
>gi|225450761|ref|XP_002279376.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 584
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 170/461 (36%), Positives = 252/461 (54%), Gaps = 36/461 (7%)
Query: 237 VELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISA 296
++ A +F I D SW TMI G+++ + +AL Y M G+ N + ++ A
Sbjct: 76 IDYAFWVFVGINYPDSYSWTTMIRGFVEAKNPEKALEFYGLMRQRGVELNKFTFLFVLKA 135
Query: 297 CGRAMAFGEGLQIHSIIVKAGFDCYD-FIQATIIHFYAACGRINLARLQFE--------- 346
G ++ EG +H +VK GF CYD F + +IH Y CG I A L F+
Sbjct: 136 YGLRPSYQEGRIVHGKLVKVGF-CYDVFTRNALIHMYLKCGSITDAHLLFDEMPNHNVVT 194
Query: 347 --------LGIKD--------------HIASWNALIAGFIRNGMIEDARQLFNNMQKRDV 384
G D ++ SWNA++ G+ + G ++ AR LF+ M +RDV
Sbjct: 195 WNTMITGCFGCGDTERARRLFGEMPERNVGSWNAVVGGYSKLGHVDIARSLFDLMPERDV 254
Query: 385 YSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEY 444
SW +MIS Y QN + ALELF M+ AGV + I + S+ A A G L GRW H Y
Sbjct: 255 VSWGSMISAYVQNGRAAEALELFKEMMLAGVSADSIIITSILSACAQIGALDMGRWIHAY 314
Query: 445 VLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDAN 504
+ + + + L A++DMYAKCG I+TAF VF + + ++ WNA++ GLA+HG
Sbjct: 315 MKRSKLRNDVFLDTALVDMYAKCGCIDTAFGVFNTMPRK--NLCSWNAMLSGLAIHGHGF 372
Query: 505 LTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCM 564
L+++ +E + N ITF+ VLS C H G V+ G + F M +N+ P ++HYGCM
Sbjct: 373 AALELFKQMESTGVGPNDITFVAVLSACSHIGSVEEGWKKFNQMDKEFNITPKVEHYGCM 432
Query: 565 VDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHG 624
VD+L R G + +A+E+IR+MP++ +VVIWG LL A ++HG VGE + L G
Sbjct: 433 VDILCRQGLINEAKEMIRTMPLEPNVVIWGALLNACKVHGYTNVGEDVVGYIQKLVSEDG 492
Query: 625 PSRVLLSNIYADAGRWEDAFSIRKEMRDCGM-KRLPGFSGV 664
VLLSNI+A +W + RK M+ G+ K++PG+S +
Sbjct: 493 GCYVLLSNIFAAKSQWNEVEKTRKMMKQMGVEKKIPGYSSI 533
Score = 179 bits (453), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 141/541 (26%), Positives = 239/541 (44%), Gaps = 109/541 (20%)
Query: 12 SQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKC 71
+ K +NS+Y+ +SAL+ C + ++IH+ + +G +TFI + YA
Sbjct: 18 TTKFKSKNSNYKT--LSALQSCKS---TEDLKKIHAQLIITGQIKDTFIATKTVESYA-- 70
Query: 72 GLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFA 131
+ ++ A VF S+T+MI GF
Sbjct: 71 ----------------------------VSARNIDYAFWVFVGINYPDSYSWTTMIRGFV 102
Query: 132 QNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVI 191
+ +ALE + MR GV N+ T V+ + E R++HG ++K+ V
Sbjct: 103 EAKNPEKALEFYGLMRQRGVELNKFTFLFVLKAYGLRPSYQEGRIVHGKLVKVGFCYDVF 162
Query: 192 ISTNLLNMYCVCSSLVEA-------------------------------RSLFDEMKERN 220
L++MY C S+ +A R LF EM ERN
Sbjct: 163 TRNALIHMYLKCGSITDAHLLFDEMPNHNVVTWNTMITGCFGCGDTERARRLFGEMPERN 222
Query: 221 IVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLC 280
+ SWN ++ G++K G V++AR LF+ +P +DVVSWG+MI Y+Q R +EAL +++ M+
Sbjct: 223 VGSWNAVVGGYSKLGHVDIARSLFDLMPERDVVSWGSMISAYVQNGRAAEALELFKEMML 282
Query: 281 DGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINL 340
G++ + ++I ++SAC + A G IH+ + ++ F+ ++ YA CG I+
Sbjct: 283 AGVSADSIIITSILSACAQIGALDMGRWIHAYMKRSKLRNDVFLDTALVDMYAKCGCIDT 342
Query: 341 ARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQP 400
A F + ++ SWNA+++G +G G+A
Sbjct: 343 AFGVFNTMPRKNLCSWNAMLSGLAIHG------------------------HGFA----- 373
Query: 401 NMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLS--A 458
ALELF M GV PN+IT V+V A + G+++EG W ++ + +
Sbjct: 374 --ALELFKQMESTGVGPNDITFVAVLSACSHIGSVEEG-WKKFNQMDKEFNITPKVEHYG 430
Query: 459 AIIDMYAKCGSINTAFEVFYHIRDRTTSVSP----WNAIICGLAMHGDANLTLKIYSDLE 514
++D+ + G IN A E+ RT + P W A++ +HG N+ + ++
Sbjct: 431 CMVDILCRQGLINEAKEMI-----RTMPLEPNVVIWGALLNACKVHGYTNVGEDVVGYIQ 485
Query: 515 K 515
K
Sbjct: 486 K 486
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 105/233 (45%), Gaps = 36/233 (15%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+ + S L C+ A+ G+ IH+ + +S L ++ F+ +L+++YAKCG I A
Sbjct: 290 IIITSILSACAQIGALDMGRWIHAYMKRSKLRNDVFLDTALVDMYAKCGCIDTAFG---- 345
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
VF+ P K S+ +M+ G A + ALE+F
Sbjct: 346 ---------------------------VFNTMPRKNLCSWNAMLSGLAIHGHGFAALELF 378
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWE-CRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
+ M GV PN++T +V+S+ H+G + E + + + + I V ++++ C
Sbjct: 379 KQMESTGVGPNDITFVAVLSACSHIGSVEEGWKKFNQMDKEFNITPKVEHYGCMVDILCR 438
Query: 203 CSSLVEARSLFDEMK-ERNIVSWNVMLNGFAKAGLVELAREL---FERIPSKD 251
+ EA+ + M E N+V W +LN G + ++ +++ S+D
Sbjct: 439 QGLINEAKEMIRTMPLEPNVVIWGALLNACKVHGYTNVGEDVVGYIQKLVSED 491
>gi|145335149|ref|NP_172066.3| protein pigment defective 247 [Arabidopsis thaliana]
gi|75191933|sp|Q9MA50.1|PPR13_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g05750, chloroplastic; AltName: Full=Protein PIGMENT
DEFECTIVE 247; Flags: Precursor
gi|6850304|gb|AAF29381.1|AC009999_1 Contains similarity to a hypothetical protein from Arabidopsis
thaliana gb|AC007109.6, and contains two DUF17 PF|01535
domains [Arabidopsis thaliana]
gi|62320576|dbj|BAD95203.1| hypothetical protein [Arabidopsis thaliana]
gi|332189766|gb|AEE27887.1| protein pigment defective 247 [Arabidopsis thaliana]
Length = 500
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 157/420 (37%), Positives = 250/420 (59%), Gaps = 6/420 (1%)
Query: 249 SKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQ 308
S+ VSW + I+ + RL+EA + M G+ PN + + L+S CG + E L
Sbjct: 33 SETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALG 92
Query: 309 --IHSIIVKAGFD-CYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIR 365
+H K G D + + II Y+ GR ARL F+ + +WN +I G++R
Sbjct: 93 DLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMR 152
Query: 366 NGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSV 425
+G +++A ++F+ M +RD+ SW+AMI+G+ + AL F M +GVKP+ + +++
Sbjct: 153 SGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAA 212
Query: 426 FCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTT 485
A + G L G W H YVL+ N +S ++ID+Y +CG + A +VFY++ RT
Sbjct: 213 LNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRT- 271
Query: 486 SVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYF 545
V WN++I G A +G+A+ +L + ++++ K +++TF G L+ C H GLV+ G RYF
Sbjct: 272 -VVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYF 330
Query: 546 KSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHG- 604
+ MK Y + P ++HYGC+VDL RAG+LEDA ++++SMPMK + V+ G+LLAA HG
Sbjct: 331 QIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHGN 390
Query: 605 NVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
N+ + ER K L L + V+LSN+YA G+WE A +R++M+ G+K+ PGFS +
Sbjct: 391 NIVLAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGFSSI 450
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 108/416 (25%), Positives = 198/416 (47%), Gaps = 39/416 (9%)
Query: 113 DKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIW 172
+++ + VS+TS I +N EA + F DM + GV PN +T +++S
Sbjct: 29 NQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGS 88
Query: 173 EC--RMLHGLVIKLMID-GFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLN 229
E +LHG KL +D V++ T ++ MY +AR +FD M+++N V+WN M++
Sbjct: 89 EALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMID 148
Query: 230 GFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVM 289
G+ ++G V+ A ++F+++P +D++SW MI+G+++ EAL +R M G+ P+ V
Sbjct: 149 GYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVA 208
Query: 290 IVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGI 349
I+ ++AC A GL +H ++ F + ++I Y CG + AR F
Sbjct: 209 IIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNME 268
Query: 350 KDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHG 409
K + SWN++I GF NG ++ F MQ++
Sbjct: 269 KRTVVSWNSVIVGFAANGNAHESLVYFRKMQEK--------------------------- 301
Query: 410 MVDAGVKPNEITMVSVFCAIASSGTLKEG-RWAHEYVLNNSITLNDNLSAAIIDMYAKCG 468
G KP+ +T A + G ++EG R+ + I+ ++D+Y++ G
Sbjct: 302 ----GFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAG 357
Query: 469 SINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTL--KIYSDLEKRNIKLNS 522
+ A ++ + + V +++ + HG+ N+ L ++ L N+K +S
Sbjct: 358 RLEDALKLVQSMPMKPNEVVI-GSLLAACSNHGN-NIVLAERLMKHLTDLNVKSHS 411
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/334 (27%), Positives = 162/334 (48%), Gaps = 49/334 (14%)
Query: 23 ELALVSALRYCSAHIAVSQ--GQQIHSLIFKSGLESN-TFIQNSLINLYAKCGLISQAKS 79
+ ++ L C + S+ G +H K GL+ N + ++I +Y+K G +A+
Sbjct: 71 HITFIALLSGCGDFTSGSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARL 130
Query: 80 MFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREA 139
+FD + V N MI GY+R+ ++++A ++FDK P + +S+T+MI GF + EA
Sbjct: 131 VFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEA 190
Query: 140 LEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNM 199
L FR+M+I GV P+ V + + +++ +LG + +H V+ V +S +L+++
Sbjct: 191 LLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDL 250
Query: 200 YCVCSSLVEARSLFDEMKERNIVSWNVMLNGFA--------------------------- 232
YC C + AR +F M++R +VSWN ++ GFA
Sbjct: 251 YCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTF 310
Query: 233 --------KAGLVELARELFERIP-----SKDVVSWGTMIDGYLQVERLSEALTMYRAML 279
GLVE F+ + S + +G ++D Y + RL +AL + ++M
Sbjct: 311 TGALTACSHVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSM- 369
Query: 280 CDGIAPNDVMIVDLISAC---GRAMAFGEGLQIH 310
+ PN+V+I L++AC G + E L H
Sbjct: 370 --PMKPNEVVIGSLLAACSNHGNNIVLAERLMKH 401
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 107/269 (39%), Gaps = 44/269 (16%)
Query: 374 QLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVF--CAIAS 431
Q N SW++ I+ +N + A + F M AGV+PN IT +++ C +
Sbjct: 26 QRHNQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFT 85
Query: 432 SGTLKEGRWAHEYVLNNSITLNDNL-SAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPW 490
SG+ G H Y + N + AII MY+K G A VF ++ D+ + W
Sbjct: 86 SGSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVT--W 143
Query: 491 NAIICGLAMHGDANLTLKIYSDLEKRN-------------------------------IK 519
N +I G G + K++ + +R+ +K
Sbjct: 144 NTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVK 203
Query: 520 LNSITFIGVLSTCCHAGLVDLG---ERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLED 576
+ + I L+ C + G + G RY S NV ++DL R G +E
Sbjct: 204 PDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVS----NSLIDLYCRCGCVEF 259
Query: 577 AEEVIRSMPMKADVVIWGTLLAASRIHGN 605
A +V +M K VV W +++ +GN
Sbjct: 260 ARQVFYNME-KRTVVSWNSVIVGFAANGN 287
>gi|347954498|gb|AEP33749.1| chloroplast biogenesis 19, partial [Crucihimalaya wallichii]
Length = 491
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 159/420 (37%), Positives = 247/420 (58%), Gaps = 6/420 (1%)
Query: 249 SKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQ 308
S+ VSW + I + RL+EA + M G+ PN + + L+S CG + E L
Sbjct: 24 SETTVSWTSRITLLTRNGRLAEAAKXFSDMRLSGVEPNHITFIALLSGCGDFPSGSETLS 83
Query: 309 --IHSIIVKAGFD-CYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIR 365
+H K G D + + II Y+ G + ARL F+ + +WN +I G++R
Sbjct: 84 NLLHGYACKLGLDRTHVMVGTAIIGMYSKRGHVKKARLVFDYMEDINSVTWNTMIDGYMR 143
Query: 366 NGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSV 425
+G +++A ++F+ M +RD+ SW+AMI+G+ + AL F M +GV+P+ + +++
Sbjct: 144 SGQVDNAVKMFDKMPERDLISWTAMINGFVKKGFHEEALVWFREMQISGVRPDYVAIIAA 203
Query: 426 FCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTT 485
A + G L G W H YV+N N +S ++ID+Y +CG + A EVF + RT
Sbjct: 204 LNACTNLGALSFGLWVHRYVMNQDFKNNVRVSNSLIDLYCRCGCVEFAREVFDKMEKRT- 262
Query: 486 SVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYF 545
V WN++I G A +G+A+ +L + +++ K +++TF G L+ C H GLV+ G RYF
Sbjct: 263 -VVSWNSVIVGFAANGNAHESLVYFRKMQEEGFKPDAVTFTGALTACSHVGLVEEGLRYF 321
Query: 546 KSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGN 605
++MK Y + P ++HYGC+VDL RAG+LEDA +VI SMPMK + V+ G+LLAA R HGN
Sbjct: 322 QTMKRDYGISPRIEHYGCLVDLYSRAGRLEDALKVIESMPMKPNEVVIGSLLAACRTHGN 381
Query: 606 VEV-GERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
V ER K L+ L + V+LSN+YA G+WE A +R++M+ G+K+ PGFS +
Sbjct: 382 NTVLAERLMKHLSDLNVKSHSNYVILSNMYAADGKWEGASQMRRKMKGLGLKKQPGFSSI 441
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 109/416 (26%), Positives = 196/416 (47%), Gaps = 37/416 (8%)
Query: 112 FDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHL--G 169
+++ + VS+TS I +N EA + F DMR+ GV PN +T +++S G
Sbjct: 19 LNQSTSETTVSWTSRITLLTRNGRLAEAAKXFSDMRLSGVEPNHITFIALLSGCGDFPSG 78
Query: 170 GIWECRMLHGLVIKLMID-GFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVML 228
+LHG KL +D V++ T ++ MY + +AR +FD M++ N V+WN M+
Sbjct: 79 SETLSNLLHGYACKLGLDRTHVMVGTAIIGMYSKRGHVKKARLVFDYMEDINSVTWNTMI 138
Query: 229 NGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDV 288
+G+ ++G V+ A ++F+++P +D++SW MI+G+++ EAL +R M G+ P+ V
Sbjct: 139 DGYMRSGQVDNAVKMFDKMPERDLISWTAMINGFVKKGFHEEALVWFREMQISGVRPDYV 198
Query: 289 MIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELG 348
I+ ++AC A GL +H ++ F + ++I Y CG + AR F+
Sbjct: 199 AIIAALNACTNLGALSFGLWVHRYVMNQDFKNNVRVSNSLIDLYCRCGCVEFAREVFDKM 258
Query: 349 IKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFH 408
K + SWN++I GF NG ++ F MQ
Sbjct: 259 EKRTVVSWNSVIVGFAANGNAHESLVYFRKMQ---------------------------- 290
Query: 409 GMVDAGVKPNEITMVSVFCAIASSGTLKEG-RWAHEYVLNNSITLNDNLSAAIIDMYAKC 467
+ G KP+ +T A + G ++EG R+ + I+ ++D+Y++
Sbjct: 291 ---EEGFKPDAVTFTGALTACSHVGLVEEGLRYFQTMKRDYGISPRIEHYGCLVDLYSRA 347
Query: 468 GSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDAN-LTLKIYSDLEKRNIKLNS 522
G + A +V + + V +++ HG+ L ++ L N+K +S
Sbjct: 348 GRLEDALKVIESMPMKPNEVVI-GSLLAACRTHGNNTVLAERLMKHLSDLNVKSHS 402
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/314 (28%), Positives = 158/314 (50%), Gaps = 55/314 (17%)
Query: 45 IHSLIFKSGLE-SNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRND 103
+H K GL+ ++ + ++I +Y+K G + +A+ +FD ++ V N MI GY+R+
Sbjct: 86 LHGYACKLGLDRTHVMVGTAIIGMYSKRGHVKKARLVFDYMEDINSVTWNTMIDGYMRSG 145
Query: 104 RLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVIS 163
++++A ++FDK P + +S+T+MI GF + EAL FR+M+I GV P+ V + + ++
Sbjct: 146 QVDNAVKMFDKMPERDLISWTAMINGFVKKGFHEEALVWFREMQISGVRPDYVAIIAALN 205
Query: 164 SSVHLG----GIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKER 219
+ +LG G+W +H V+ V +S +L+++YC C + AR +FD+M++R
Sbjct: 206 ACTNLGALSFGLW----VHRYVMNQDFKNNVRVSNSLIDLYCRCGCVEFAREVFDKMEKR 261
Query: 220 NIVSWNVMLNGFA-----------------------------------KAGLVELARELF 244
+VSWN ++ GFA GLVE F
Sbjct: 262 TVVSWNSVIVGFAANGNAHESLVYFRKMQEEGFKPDAVTFTGALTACSHVGLVEEGLRYF 321
Query: 245 ERIP-----SKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISAC-- 297
+ + S + +G ++D Y + RL +AL + +M + PN+V+I L++AC
Sbjct: 322 QTMKRDYGISPRIEHYGCLVDLYSRAGRLEDALKVIESM---PMKPNEVVIGSLLAACRT 378
Query: 298 -GRAMAFGEGLQIH 310
G E L H
Sbjct: 379 HGNNTVLAERLMKH 392
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 71/153 (46%), Gaps = 32/153 (20%)
Query: 21 DYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSM 80
DY +A+++AL C+ A+S G +H + ++N + NSLI+LY +CG + A+ +
Sbjct: 196 DY-VAIIAALNACTNLGALSFGLWVHRYVMNQDFKNNVRVSNSLIDLYCRCGCVEFAREV 254
Query: 81 FDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREAL 140
F DK + VS+ S+I+GFA N E+L
Sbjct: 255 F-------------------------------DKMEKRTVVSWNSVIVGFAANGNAHESL 283
Query: 141 EVFRDMRILGVIPNEVTLASVISSSVHLGGIWE 173
FR M+ G P+ VT +++ H+G + E
Sbjct: 284 VYFRKMQEEGFKPDAVTFTGALTACSHVGLVEE 316
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 106/269 (39%), Gaps = 44/269 (16%)
Query: 374 QLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVF--CAIAS 431
Q N SW++ I+ +N + A + F M +GV+PN IT +++ C
Sbjct: 17 QRLNQSTSETTVSWTSRITLLTRNGRLAEAAKXFSDMRLSGVEPNHITFIALLSGCGDFP 76
Query: 432 SGTLKEGRWAHEYVLNNSITLNDNL-SAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPW 490
SG+ H Y + + AII MY+K G + A VF ++ D SV+ W
Sbjct: 77 SGSETLSNLLHGYACKLGLDRTHVMVGTAIIGMYSKRGHVKKARLVFDYMED-INSVT-W 134
Query: 491 NAIICGLAMHGDANLTLKIYSDLEKRN-------------------------------IK 519
N +I G G + +K++ + +R+ ++
Sbjct: 135 NTMIDGYMRSGQVDNAVKMFDKMPERDLISWTAMINGFVKKGFHEEALVWFREMQISGVR 194
Query: 520 LNSITFIGVLSTCCHAGLVDLG---ERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLED 576
+ + I L+ C + G + G RY + NV ++DL R G +E
Sbjct: 195 PDYVAIIAALNACTNLGALSFGLWVHRYVMNQDFKNNVRVS----NSLIDLYCRCGCVEF 250
Query: 577 AEEVIRSMPMKADVVIWGTLLAASRIHGN 605
A EV M K VV W +++ +GN
Sbjct: 251 AREVFDKME-KRTVVSWNSVIVGFAANGN 278
>gi|225439799|ref|XP_002273893.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g37310-like [Vitis vinifera]
Length = 667
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 185/639 (28%), Positives = 319/639 (49%), Gaps = 71/639 (11%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
+++CS H + Q +Q+H+ I S L + F+ + LI Y+K
Sbjct: 41 IQHCSDHRLLRQAKQLHARIVLSSLTPDNFLASKLITFYSK------------------- 81
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
++ L +A +VFDK K S+ +M++G++ ++ L + +
Sbjct: 82 ------------SNHLYEAHKVFDKILDKNIFSWNAMLIGYSIHNMHVHTLNLLSSLLPS 129
Query: 150 GVI---PNEVTLASVISS-SVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSS 205
+ P+ T+ V+ + SV + + V++ D + + L+ Y C
Sbjct: 130 YSLTLKPDNFTITCVLKALSVLFPDSILAKEVQCFVLRHGFDSDIFVVNALITYYSRCDE 189
Query: 206 LVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQV 265
AR LFD M +R+IVSWN M+ G+++ G E +EL
Sbjct: 190 YGIARILFDRMHDRDIVSWNSMIAGYSQGGFYEDCKEL---------------------- 227
Query: 266 ERLSEALTMYRAML-CDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFI 324
YR ML G+ PN V +V ++ AC + G+++H I++ +
Sbjct: 228 ---------YRKMLDSTGLRPNGVTVVSVLQACAQTNDLVFGMKVHQFIIERKVEMDVSA 278
Query: 325 QATIIHFYAACGRINLARLQF-ELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRD 383
++I YA CG ++ AR F E+ KD + ++ ++++G++ +G ++ A LF M+
Sbjct: 279 HNSLIGLYAKCGSLDYARELFNEMSNKDEV-TYGSIVSGYMTHGFVDKAMDLFREMKNPR 337
Query: 384 VYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHE 443
+ +W+A+ISG QN LEL M + G +PN +T+ S+ + LK G+ H
Sbjct: 338 LSTWNAVISGLVQNNCNEGILELVQEMQEFGFRPNAVTLSSILPTFSCFSNLKGGKAIHA 397
Query: 444 YVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDA 503
Y + N N ++ +IID YAK G + A VF +DR+ V W AII + HGDA
Sbjct: 398 YAIRNGYAHNIYVATSIIDAYAKLGFLRGAQWVFDQSKDRSLIV--WTAIISAYSAHGDA 455
Query: 504 NLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGC 563
N L+++ D+ + + +TF VL+ C H+G+V+ + F M Y +P ++HY C
Sbjct: 456 NAALRLFGDMLSNGTQPDPVTFTAVLAACAHSGMVNEAWKIFDEMFLKYGFQPCVEHYAC 515
Query: 564 MVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSH 623
MV +L RAG L +A E I MP++ + +WG LL + G+VE+G+ L ++P +
Sbjct: 516 MVGVLSRAGMLSEAAEFICKMPIEPNAKVWGALLNGVSVSGDVELGKFVCDHLFNMEPEN 575
Query: 624 GPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
+ V+++N+Y+ AGRWE+A +IR++M+ G+K++PG S
Sbjct: 576 TGNYVIMANLYSQAGRWEEAENIREKMKKIGLKKIPGTS 614
Score = 119 bits (297), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 92/405 (22%), Positives = 184/405 (45%), Gaps = 50/405 (12%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+ +VS L+ C+ + G ++H I + +E + NSLI LYAKCG + A+ +F+
Sbjct: 242 VTVVSVLQACAQTNDLVFGMKVHQFIIERKVEMDVSAHNSLIGLYAKCGSLDYARELFNE 301
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
S D V ++SGY+ + ++ A ++F + ++ ++I G QN+C LE+
Sbjct: 302 MSNKDEVTYGSIVSGYMTHGFVDKAMDLFREMKNPRLSTWNAVISGLVQNNCNEGILELV 361
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
++M+ G PN VTL+S++ + + + +H I+ + ++T++++ Y
Sbjct: 362 QEMQEFGFRPNAVTLSSILPTFSCFSNLKGGKAIHAYAIRNGYAHNIYVATSIIDAYAKL 421
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYL 263
L A+ +FD+ K+R+++ W +++ ++ G
Sbjct: 422 GFLRGAQWVFDQSKDRSLIVWTAIISAYSAHG---------------------------- 453
Query: 264 QVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIH-SIIVKAGFDCYD 322
+ AL ++ ML +G P+ V +++AC + E +I + +K GF
Sbjct: 454 ---DANAALRLFGDMLSNGTQPDPVTFTAVLAACAHSGMVNEAWKIFDEMFLKYGF---- 506
Query: 323 FIQATIIHFYAACGRINLARLQFE-------LGIKDHIASWNALIAGFIRNGMIEDAR-- 373
Q + H+ G ++ A + E + I+ + W AL+ G +G +E +
Sbjct: 507 --QPCVEHYACMVGVLSRAGMLSEAAEFICKMPIEPNAKVWGALLNGVSVSGDVELGKFV 564
Query: 374 --QLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVK 416
LF NM+ + ++ M + Y+Q + A + M G+K
Sbjct: 565 CDHLF-NMEPENTGNYVIMANLYSQAGRWEEAENIREKMKKIGLK 608
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/317 (22%), Positives = 135/317 (42%), Gaps = 34/317 (10%)
Query: 293 LISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDH 352
LI C + Q+H+ IV + +F+ + +I FY+ + A F+ + +
Sbjct: 40 LIQHCSDHRLLRQAKQLHARIVLSSLTPDNFLASKLITFYSKSNHLYEAHKVFDKILDKN 99
Query: 353 IASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQP-NMALELFHGMV 411
I SWNA++ G+ +NM + S+++ Y+ +P N + +
Sbjct: 100 IFSWNAMLIGYS-----------IHNMHVHTLNLLSSLLPSYSLTLKPDNFTITCVLKAL 148
Query: 412 DAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSIN 471
+ P+ I V C + L+ G + +V+N A+I Y++C
Sbjct: 149 SV-LFPDSILAKEVQCFV-----LRHGFDSDIFVVN-----------ALITYYSRCDEYG 191
Query: 472 TAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSD-LEKRNIKLNSITFIGVLS 530
A +F + DR + WN++I G + G ++Y L+ ++ N +T + VL
Sbjct: 192 IARILFDRMHDR--DIVSWNSMIAGYSQGGFYEDCKELYRKMLDSTGLRPNGVTVVSVLQ 249
Query: 531 TCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADV 590
C + G + + + VE D+ + ++ L + G L+ A E+ M K D
Sbjct: 250 ACAQTNDLVFGMKVHQFIIE-RKVEMDVSAHNSLIGLYAKCGSLDYARELFNEMSNK-DE 307
Query: 591 VIWGTLLAASRIHGNVE 607
V +G++++ HG V+
Sbjct: 308 VTYGSIVSGYMTHGFVD 324
>gi|297736926|emb|CBI26127.3| unnamed protein product [Vitis vinifera]
Length = 603
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 175/561 (31%), Positives = 296/561 (52%), Gaps = 24/561 (4%)
Query: 104 RLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVIS 163
R+ AR +FD+ P K V++ +M+ ++Q ++AL +F MRI P+ T + +S
Sbjct: 20 RITSARRLFDEMPHKDTVAWNAMLASYSQLGLHQQALCLFHHMRIANSRPDRFTFTATLS 79
Query: 164 SSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVS 223
+ LG + +H V+ + + +L++MY C S AR +F+EM N VS
Sbjct: 80 ACAGLGELRRGMKIHAQVVVSGCQSSLPVGNSLIDMYGKCLSATSARRVFEEMSIMNEVS 139
Query: 224 WNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGI 283
W +L + +GL ++AR +F+ +P K ++W MI GY Q + L +++ M D +
Sbjct: 140 WCSLLFAYTSSGLFDVARVVFDGMPKKVEIAWNIMISGYGQCGDVELCLGLFKKMREDSL 199
Query: 284 APNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARL 343
P+ L++A G +H I+K+G+D ++ ++
Sbjct: 200 QPDQWTFSALVNALCELQEPSYGYMMHGFIIKSGWD-------------------DVMKV 240
Query: 344 QFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMA 403
+GI + SWNA+I ++ G +A +F +++V SW++MI+GYA+N A
Sbjct: 241 FESIGILTQV-SWNAMIDAHMKIGDTHEAFLVFQLAPEKNVVSWTSMITGYARNGHGEQA 299
Query: 404 LELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDM 463
L F M++ ++P++ T +V A +S TL G+ H +++ ++ +++M
Sbjct: 300 LSFFVKMMENHIQPDDFTFGAVLHACSSLATLGHGKMIHGSIIHYGFHAYVDVGNGLVNM 359
Query: 464 YAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSI 523
YAKCG I + F I + + WNA++ GL MHG A L++Y ++ +K + +
Sbjct: 360 YAKCGDIQGSNTAFKEILGK--DLVSWNAMLFGLGMHGHATQALELYEEMVASGMKPDKV 417
Query: 524 TFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVI-- 581
TFIG+L TC H+GL++ G+ F+SM SVY + + +H CMVDLLGR G L A E++
Sbjct: 418 TFIGLLMTCSHSGLIEKGQALFESMVSVYGLSQETEHVVCMVDLLGRGGYLAQARELVDE 477
Query: 582 RSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWE 641
S +A+ + LL A H V +G + L +P S VLLSN+Y +G+W+
Sbjct: 478 YSRTGRAETSLPEALLGACFAHSEVRMGANLGEYLKVFEPQKEMSYVLLSNLYCVSGQWK 537
Query: 642 DAFSIRKEMRDCGMKRLPGFS 662
+A +RK M D G+K++PG S
Sbjct: 538 EAEMVRKTMTDHGVKKMPGCS 558
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 113/454 (24%), Positives = 207/454 (45%), Gaps = 52/454 (11%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+ L C+ + +G +IH+ + SG +S+ + NSLI++Y KC + A+ +F+
Sbjct: 72 FTFTATLSACAGLGELRRGMKIHAQVVVSGCQSSLPVGNSLIDMYGKCLSATSARRVFEE 131
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
S ++ V+ ++ Y + + AR VFD P K +++ MI G+ Q L +F
Sbjct: 132 MSIMNEVSWCSLLFAYTSSGLFDVARVVFDGMPKKVEIAWNIMISGYGQCGDVELCLGLF 191
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
+ MR + P++ T ++++++ L M+HG +IK
Sbjct: 192 KKMREDSLQPDQWTFSALVNALCELQEPSYGYMMHGFIIK-------------------- 231
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYL 263
S + +F+ + VSWN M++ K G A +F+ P K+VVSW +MI GY
Sbjct: 232 SGWDDVMKVFESIGILTQVSWNAMIDAHMKIGDTHEAFLVFQLAPEKNVVSWTSMITGYA 291
Query: 264 QVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDF 323
+ +AL+ + M+ + I P+D ++ AC G G IH I+ GF Y
Sbjct: 292 RNGHGEQALSFFVKMMENHIQPDDFTFGAVLHACSSLATLGHGKMIHGSIIHYGFHAYVD 351
Query: 324 IQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRD 383
+ +++ YA CG I + F+ + + SWNA++ G GM A Q
Sbjct: 352 VGNGLVNMYAKCGDIQGSNTAFKEILGKDLVSWNAMLFGL---GMHGHATQ--------- 399
Query: 384 VYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHE 443
ALEL+ MV +G+KP+++T + + + SG +++G+ E
Sbjct: 400 -------------------ALELYEEMVASGMKPDKVTFIGLLMTCSHSGLIEKGQALFE 440
Query: 444 YVLN-NSITLNDNLSAAIIDMYAKCGSINTAFEV 476
+++ ++ ++D+ + G + A E+
Sbjct: 441 SMVSVYGLSQETEHVVCMVDLLGRGGYLAQAREL 474
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 104/416 (25%), Positives = 188/416 (45%), Gaps = 41/416 (9%)
Query: 231 FAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMI 290
AK G + AR LF+ +P KD V+W M+ Y Q+ +AL ++ M P+
Sbjct: 15 LAKLGRITSARRLFDEMPHKDTVAWNAMLASYSQLGLHQQALCLFHHMRIANSRPDRFTF 74
Query: 291 VDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQF-ELGI 349
+SAC G++IH+ +V +G + ++I Y C AR F E+ I
Sbjct: 75 TATLSACAGLGELRRGMKIHAQVVVSGCQSSLPVGNSLIDMYGKCLSATSARRVFEEMSI 134
Query: 350 KDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHG 409
+ + SW +L+ + +G+ + AR +F+ M K+ +W+ MISGY Q + L LF
Sbjct: 135 MNEV-SWCSLLFAYTSSGLFDVARVVFDGMPKKVEIAWNIMISGYGQCGDVELCLGLFKK 193
Query: 410 MVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNN----------SITLNDNLS-A 458
M + ++P++ T ++ A+ G H +++ + SI + +S
Sbjct: 194 MREDSLQPDQWTFSALVNALCELQEPSYGYMMHGFIIKSGWDDVMKVFESIGILTQVSWN 253
Query: 459 AIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNI 518
A+ID + K G + AF VF ++ +V W ++I G A +G L + + + +I
Sbjct: 254 AMIDAHMKIGDTHEAFLVFQLAPEK--NVVSWTSMITGYARNGHGEQALSFFVKMMENHI 311
Query: 519 KLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGC---------MVDLLG 569
+ + TF VL C + L LG + + HYG +V++
Sbjct: 312 QPDDFTFGAVLHAC--SSLATLGHGKM--------IHGSIIHYGFHAYVDVGNGLVNMYA 361
Query: 570 RAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGN----VEVGERAAKSLAGLQP 621
+ G ++ + + + + D+V W +L +HG+ +E+ E S G++P
Sbjct: 362 KCGDIQGSNTAFKEI-LGKDLVSWNAMLFGLGMHGHATQALELYEEMVAS--GMKP 414
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 131/319 (41%), Gaps = 53/319 (16%)
Query: 349 IKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFH 408
+ H+ + I + G I AR+LF+ M +D +W+AM++ Y+Q AL LFH
Sbjct: 1 MHSHLFQTTSKIVALAKLGRITSARRLFDEMPHKDTVAWNAMLASYSQLGLHQQALCLFH 60
Query: 409 GMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCG 468
M A +P+ T + A A G L+ G H V+ + + + ++IDMY KC
Sbjct: 61 HMRIANSRPDRFTFTATLSACAGLGELRRGMKIHAQVVVSGCQSSLPVGNSLIDMYGKCL 120
Query: 469 SINTAFEVFYH--IRDRTTSVS---------------------------PWNAIICGLAM 499
S +A VF I + + S WN +I G
Sbjct: 121 SATSARRVFEEMSIMNEVSWCSLLFAYTSSGLFDVARVVFDGMPKKVEIAWNIMISGYGQ 180
Query: 500 HGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCC-----------HAGLVDLG----ERY 544
GD L L ++ + + +++ + TF +++ C H ++ G +
Sbjct: 181 CGDVELCLGLFKKMREDSLQPDQWTFSALVNALCELQEPSYGYMMHGFIIKSGWDDVMKV 240
Query: 545 FKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHG 604
F+S+ + V + M+D + G +A V + P K +VV W +++ +G
Sbjct: 241 FESIGILTQVS-----WNAMIDAHMKIGDTHEAFLVFQLAPEK-NVVSWTSMITGYARNG 294
Query: 605 NVEVGERAAKSLAGLQPSH 623
+ GE+A + +H
Sbjct: 295 H---GEQALSFFVKMMENH 310
>gi|359485813|ref|XP_003633340.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 679
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 171/487 (35%), Positives = 262/487 (53%), Gaps = 65/487 (13%)
Query: 240 ARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGR 299
AR +F+RI + ++ W T+I Y++ + + + ++ ++ + + P++ + +I C R
Sbjct: 66 ARSIFDRIQRRSLIHWNTIIKCYVENQFSHDGIVLFHELVHEYL-PDNFTLPCVIKGCAR 124
Query: 300 AMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNAL 359
EG QIH + +K GF F+Q ++++ Y+ CG I+ AR F+ I + WN+L
Sbjct: 125 LGVVQEGKQIHGLALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSL 184
Query: 360 IAGFIRNGMIEDARQLFNNMQKRDVY-------------------------------SWS 388
I G+ R G I+ A QLF M +RD + SW+
Sbjct: 185 IDGYARCGEIDIALQLFEEMPERDAFSWTVLVDGLSKCGKVESARKLFDQMPCRNLVSWN 244
Query: 389 AMISGYAQNEQPNMALELFHGM---------------------VDA----------GVKP 417
AMI+GY ++ + ALELF+ M +DA G +P
Sbjct: 245 AMINGYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGSRP 304
Query: 418 NEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVF 477
+ T+VSV A++ L +GRW H Y+ N L+ L ++I+MYAKCG I +A VF
Sbjct: 305 SHATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIESALTVF 364
Query: 478 YHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGL 537
I+ + V W AII GL +HG AN L ++ ++ K +K N+I FIGVL+ C HAGL
Sbjct: 365 RAIQKK--KVGHWTAIIVGLGIHGMANHALALFLEMCKTGLKPNAIIFIGVLNACNHAGL 422
Query: 538 VDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLL 597
VD G +YF M + Y +EP L+HYGC+VD+L RAG LE+A+ I +MP+ + VIW +LL
Sbjct: 423 VDDGRQYFDMMMNEYKIEPTLEHYGCLVDILCRAGHLEEAKNTIENMPISPNKVIWMSLL 482
Query: 598 AASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKR 657
SR HG +++GE AA+ + + P +LLSN+YA +G WE +R+ M G ++
Sbjct: 483 GGSRNHGKIDIGEYAAQRVIEVAPETIGCYILLSNMYAASGMWEKVSHVREMMYKRGFRK 542
Query: 658 LPGFSGV 664
PG S V
Sbjct: 543 DPGCSSV 549
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 123/535 (22%), Positives = 215/535 (40%), Gaps = 133/535 (24%)
Query: 38 AVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMIS 97
A + +Q+H+ K+ + ++ F+ + L+ LY+ DP
Sbjct: 25 APQEVEQLHAFSLKTAIFNHPFVSSRLLALYS------------------DP-------- 58
Query: 98 GYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVT 157
+ + L AR +FD+ + + + ++I + +N + + +F ++ + +P+ T
Sbjct: 59 ---KINDLGYARSIFDRIQRRSLIHWNTIIKCYVENQFSHDGIVLFHEL-VHEYLPDNFT 114
Query: 158 LASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFD--- 214
L VI LG + E + +HGL +K+ V + +L+NMY C + AR +FD
Sbjct: 115 LPCVIKGCARLGVVQEGKQIHGLALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMI 174
Query: 215 ----------------------------EMKERNIVSWNVMLNGFAKAGLVELARELFER 246
EM ER+ SW V+++G +K G VE AR+LF++
Sbjct: 175 DKDVVLWNSLIDGYARCGEIDIALQLFEEMPERDAFSWTVLVDGLSKCGKVESARKLFDQ 234
Query: 247 IPSKDVVSWGTMIDGYLQV-------------------------------ERLSEALTMY 275
+P +++VSW MI+GY++ + +A+ M+
Sbjct: 235 MPCRNLVSWNAMINGYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMF 294
Query: 276 RAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAAC 335
ML G P+ +V ++SA G+G IHS + K GF+ + ++I YA C
Sbjct: 295 FMMLKLGSRPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKC 354
Query: 336 GRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYA 395
G I A F K + W A+I G +GM
Sbjct: 355 GCIESALTVFRAIQKKKVGHWTAIIVGLGIHGM--------------------------- 387
Query: 396 QNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNN-SITLND 454
N AL LF M G+KPN I + V A +G + +GR + ++N I
Sbjct: 388 ----ANHALALFLEMCKTGLKPNAIIFIGVLNACNHAGLVDDGRQYFDMMMNEYKIEPTL 443
Query: 455 NLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSP----WNAIICGLAMHGDANL 505
++D+ + G + A +SP W +++ G HG ++
Sbjct: 444 EHYGCLVDILCRAGHLEEAKNTI-----ENMPISPNKVIWMSLLGGSRNHGKIDI 493
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 96/418 (22%), Positives = 169/418 (40%), Gaps = 109/418 (26%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
L ++ C+ V +G+QIH L K G S+ F+Q SL+N+Y+KCG I A+ +FD
Sbjct: 113 FTLPCVIKGCARLGVVQEGKQIHGLALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDG 172
Query: 84 CSTLDPVACNIMISGYIR-------------------------------NDRLNDAREVF 112
D V N +I GY R ++ AR++F
Sbjct: 173 MIDKDVVLWNSLIDGYARCGEIDIALQLFEEMPERDAFSWTVLVDGLSKCGKVESARKLF 232
Query: 113 DKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRI------------------------ 148
D+ P + VS+ +MI G+ ++ + ALE+F M I
Sbjct: 233 DQMPCRNLVSWNAMINGYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVK 292
Query: 149 -------LGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIK--LMIDGFVIISTNLLNM 199
LG P+ TL SV+S+ L + + R +H + K +DG I+ T+L+ M
Sbjct: 293 MFFMMLKLGSRPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDG--ILGTSLIEM 350
Query: 200 YCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMI 259
Y C + A ++F ++++ + W ++ G G+
Sbjct: 351 YAKCGCIESALTVFRAIQKKKVGHWTAIIVGLGIHGMA---------------------- 388
Query: 260 DGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFD 319
+ AL ++ M G+ PN ++ + +++AC A +G Q +++
Sbjct: 389 ---------NHALALFLEMCKTGLKPNAIIFIGVLNACNHAGLVDDGRQYFDMMMNE--- 436
Query: 320 CYDFIQATIIHF------YAACGRINLARLQFE-LGIKDHIASWNALIAGFIRNGMIE 370
Y I+ T+ H+ G + A+ E + I + W +L+ G +G I+
Sbjct: 437 -YK-IEPTLEHYGCLVDILCRAGHLEEAKNTIENMPISPNKVIWMSLLGGSRNHGKID 492
>gi|10092182|gb|AAG12601.1|AC068900_7 hypothetical protein; 7123-4412 [Arabidopsis thaliana]
Length = 861
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 194/641 (30%), Positives = 314/641 (48%), Gaps = 83/641 (12%)
Query: 28 SALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTL 87
S LR C+A + G Q+H+ KS ++ ++ + +++YAKC
Sbjct: 244 SVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKC---------------- 287
Query: 88 DPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMR 147
D + DA+ +FD + SY +MI G++Q + +AL +F +
Sbjct: 288 ---------------DNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLM 332
Query: 148 ILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLV 207
G+ +E++L+ V + + G+ E ++GL IK + V ++ ++MY C +L
Sbjct: 333 SSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALA 392
Query: 208 EARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVER 267
EA +FDEM+ R D VSW +I + Q +
Sbjct: 393 EAFRVFDEMRRR-------------------------------DAVSWNAIIAAHEQNGK 421
Query: 268 LSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQAT 327
E L ++ +ML I P++ ++ AC + G G++IHS IVK+G + +
Sbjct: 422 GYETLFLFVSMLRSRIEPDEFTFGSILKACTGG-SLGYGMEIHSSIVKSGMASNSSVGCS 480
Query: 328 IIHFYAACGRINLA-RLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYS 386
+I Y+ CG I A ++ + +++ G +E+ ++ N + S
Sbjct: 481 LIDMYSKCGMIEEAEKIHSRFFQRANVS------------GTMEELEKMHNKRLQEMCVS 528
Query: 387 WSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVL 446
W+++ISGY EQ A LF M++ G+ P++ T +V A+ + G+ H V+
Sbjct: 529 WNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVI 588
Query: 447 NNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHI--RDRTTSVSPWNAIICGLAMHGDAN 504
+ + + + ++DMY+KCG ++ + +F RD T WNA+ICG A HG
Sbjct: 589 KKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVT----WNAMICGYAHHGKGE 644
Query: 505 LTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCM 564
++++ + NIK N +TFI +L C H GL+D G YF MK Y ++P L HY M
Sbjct: 645 EAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNM 704
Query: 565 VDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIH-GNVEVGERAAKSLAGLQPSH 623
VD+LG++G+++ A E+IR MP +AD VIW TLL IH NVEV E A +L L P
Sbjct: 705 VDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQD 764
Query: 624 GPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
+ LLSN+YADAG WE +R+ MR +K+ PG S V
Sbjct: 765 SSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWV 805
Score = 188 bits (477), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 151/572 (26%), Positives = 262/572 (45%), Gaps = 70/572 (12%)
Query: 33 CSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVAC 92
C+ A+ G+Q H+ + SG TF+ N L+ +Y A +FD D V+
Sbjct: 16 CAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSW 75
Query: 93 NIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVI 152
N MI+GY +++ + A F+ P++ VS+ SM+ G+ QN +++EVF DM G+
Sbjct: 76 NKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIE 135
Query: 153 PNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSL 212
+ T A ++ L +HG+V+++ D V+ ++ LL+MY VE+ +
Sbjct: 136 FDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRV 195
Query: 213 FDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEAL 272
F + E+N VSW+ ++ G + L+ LA + F+ + V+ G Y V R AL
Sbjct: 196 FQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQK---VNAGVSQSIYASVLRSCAAL 252
Query: 273 TMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFY 332
+ R G Q+H+ +K+ F ++ + Y
Sbjct: 253 SELRL----------------------------GGQLHAHALKSDFAADGIVRTATLDMY 284
Query: 333 AACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMIS 392
A C + A++ F +N + + S++AMI+
Sbjct: 285 AKCDNMQDAQILF-------------------------------DNSENLNRQSYNAMIT 313
Query: 393 GYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITL 452
GY+Q E AL LFH ++ +G+ +EI++ VF A A L EG + + +S++L
Sbjct: 314 GYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSL 373
Query: 453 NDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSD 512
+ ++ A IDMY KC ++ AF VF +R R +VS WNAII +G TL ++
Sbjct: 374 DVCVANAAIDMYGKCQALAEAFRVFDEMR-RRDAVS-WNAIIAAHEQNGKGYETLFLFVS 431
Query: 513 LEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGC-MVDLLGRA 571
+ + I+ + TF +L C L E + +KS + GC ++D+ +
Sbjct: 432 MLRSRIEPDEFTFGSILKACTGGSLGYGMEIHSSIVKSGMASNSSV---GCSLIDMYSKC 488
Query: 572 GQLEDAEEVIRSMPMKADVVIWGTLLAASRIH 603
G +E+AE++ +A+V GT+ ++H
Sbjct: 489 GMIEEAEKIHSRFFQRANVS--GTMEELEKMH 518
Score = 146 bits (368), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 138/617 (22%), Positives = 248/617 (40%), Gaps = 122/617 (19%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
L+ CS S G QIH ++ + G +++ ++L+++YAK
Sbjct: 145 LKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAK------------------- 185
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
R ++ VF P K VS++++I G QN+ AL+ F++M+ +
Sbjct: 186 ------------GKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKV 233
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
++ ASV+ S L + LH +K I+ T L+MY C ++ +A
Sbjct: 234 NAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDA 293
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLS 269
+ LFD + N S+N MI GY Q E
Sbjct: 294 QILFDNSENLNRQSYN-------------------------------AMITGYSQEEHGF 322
Query: 270 EALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATII 329
+AL ++ ++ G+ +++ + + AC EGLQI+ + +K+ + I
Sbjct: 323 KALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAI 382
Query: 330 HFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSA 389
Y C + A F+ + SWNA+IA +NG
Sbjct: 383 DMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNG---------------------- 420
Query: 390 MISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNS 449
GY L LF M+ + ++P+E T S+ A + G+L G H ++ +
Sbjct: 421 --KGYE-------TLFLFVSMLRSRIEPDEFTFGSILKA-CTGGSLGYGMEIHSSIVKSG 470
Query: 450 ITLNDNLSAAIIDMYAKCGSINTA-------------------FEVFYHIRDRTTSVSPW 490
+ N ++ ++IDMY+KCG I A E ++ R + VS W
Sbjct: 471 MASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVS-W 529
Query: 491 NAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKS 550
N+II G M + +++ + + I + T+ VL TC + LG++ +
Sbjct: 530 NSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIK 589
Query: 551 VYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGN----V 606
++ D+ +VD+ + G L D+ ++ ++ D V W ++ HG +
Sbjct: 590 -KELQSDVYICSTLVDMYSKCGDLHDS-RLMFEKSLRRDFVTWNAMICGYAHHGKGEEAI 647
Query: 607 EVGERAAKSLAGLQPSH 623
++ ER L ++P+H
Sbjct: 648 QLFERMI--LENIKPNH 662
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 105/456 (23%), Positives = 197/456 (43%), Gaps = 77/456 (16%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E++L R C+ +S+G QI+ L KS L + + N+ I++Y KC +++A +FD
Sbjct: 340 EISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFD 399
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
D V+ N +I+ + +N + G+ E L +
Sbjct: 400 EMRRRDAVSWNAIIAAHEQNGK------------------------GY-------ETLFL 428
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
F M + P+E T S++ + G + +H ++K + + +L++MY
Sbjct: 429 FVSMLRSRIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSK 487
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
C + EA + +R VS G +E ++ + + VSW ++I GY
Sbjct: 488 CGMIEEAEKIHSRFFQRANVS-----------GTMEELEKMHNKRLQEMCVSWNSIISGY 536
Query: 263 LQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD 322
+ E+ +A ++ M+ GI P+ ++ C + G G QIH+ ++K
Sbjct: 537 VMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDV 596
Query: 323 FIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKR 382
+I +T++ Y+ CG ++ +RL FE ++ +WNA+I G+ +G E+A QLF
Sbjct: 597 YICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFER---- 652
Query: 383 DVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAH 442
M+ +KPN +T +S+ A A G + +G +
Sbjct: 653 ---------------------------MILENIKPNHVTFISILRACAHMGLIDKG-LEY 684
Query: 443 EYVLNNSITLNDNLS--AAIIDMYAKCGSINTAFEV 476
Y++ L+ L + ++D+ K G + A E+
Sbjct: 685 FYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALEL 720
>gi|334185027|ref|NP_186882.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546764|sp|Q9FWA6.2|PP207_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g02330
gi|332640272|gb|AEE73793.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 903
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 194/641 (30%), Positives = 314/641 (48%), Gaps = 83/641 (12%)
Query: 28 SALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTL 87
S LR C+A + G Q+H+ KS ++ ++ + +++YAKC
Sbjct: 286 SVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKC---------------- 329
Query: 88 DPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMR 147
D + DA+ +FD + SY +MI G++Q + +AL +F +
Sbjct: 330 ---------------DNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLM 374
Query: 148 ILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLV 207
G+ +E++L+ V + + G+ E ++GL IK + V ++ ++MY C +L
Sbjct: 375 SSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALA 434
Query: 208 EARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVER 267
EA +FDEM+ R D VSW +I + Q +
Sbjct: 435 EAFRVFDEMRRR-------------------------------DAVSWNAIIAAHEQNGK 463
Query: 268 LSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQAT 327
E L ++ +ML I P++ ++ AC + G G++IHS IVK+G + +
Sbjct: 464 GYETLFLFVSMLRSRIEPDEFTFGSILKACTGG-SLGYGMEIHSSIVKSGMASNSSVGCS 522
Query: 328 IIHFYAACGRINLA-RLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYS 386
+I Y+ CG I A ++ + +++ G +E+ ++ N + S
Sbjct: 523 LIDMYSKCGMIEEAEKIHSRFFQRANVS------------GTMEELEKMHNKRLQEMCVS 570
Query: 387 WSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVL 446
W+++ISGY EQ A LF M++ G+ P++ T +V A+ + G+ H V+
Sbjct: 571 WNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVI 630
Query: 447 NNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHI--RDRTTSVSPWNAIICGLAMHGDAN 504
+ + + + ++DMY+KCG ++ + +F RD T WNA+ICG A HG
Sbjct: 631 KKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVT----WNAMICGYAHHGKGE 686
Query: 505 LTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCM 564
++++ + NIK N +TFI +L C H GL+D G YF MK Y ++P L HY M
Sbjct: 687 EAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNM 746
Query: 565 VDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIH-GNVEVGERAAKSLAGLQPSH 623
VD+LG++G+++ A E+IR MP +AD VIW TLL IH NVEV E A +L L P
Sbjct: 747 VDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQD 806
Query: 624 GPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
+ LLSN+YADAG WE +R+ MR +K+ PG S V
Sbjct: 807 SSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWV 847
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 151/575 (26%), Positives = 263/575 (45%), Gaps = 70/575 (12%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
+ C+ A+ G+Q H+ + SG TF+ N L+ +Y A +FD D
Sbjct: 55 FKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDV 114
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
V+ N MI+GY +++ + A F+ P++ VS+ SM+ G+ QN +++EVF DM
Sbjct: 115 VSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGRE 174
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
G+ + T A ++ L +HG+V+++ D V+ ++ LL+MY VE+
Sbjct: 175 GIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVES 234
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLS 269
+F + E+N VSW+ ++ G + L+ LA + F+ + V+ G Y V R
Sbjct: 235 LRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQK---VNAGVSQSIYASVLRSC 291
Query: 270 EALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATII 329
AL+ R G Q+H+ +K+ F ++ +
Sbjct: 292 AALSELRL----------------------------GGQLHAHALKSDFAADGIVRTATL 323
Query: 330 HFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSA 389
YA C + A++ F +N + + S++A
Sbjct: 324 DMYAKCDNMQDAQILF-------------------------------DNSENLNRQSYNA 352
Query: 390 MISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNS 449
MI+GY+Q E AL LFH ++ +G+ +EI++ VF A A L EG + + +S
Sbjct: 353 MITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSS 412
Query: 450 ITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKI 509
++L+ ++ A IDMY KC ++ AF VF +R R +VS WNAII +G TL +
Sbjct: 413 LSLDVCVANAAIDMYGKCQALAEAFRVFDEMR-RRDAVS-WNAIIAAHEQNGKGYETLFL 470
Query: 510 YSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGC-MVDLL 568
+ + + I+ + TF +L C L E + +KS + GC ++D+
Sbjct: 471 FVSMLRSRIEPDEFTFGSILKACTGGSLGYGMEIHSSIVKSGMASNSSV---GCSLIDMY 527
Query: 569 GRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIH 603
+ G +E+AE++ +A+V GT+ ++H
Sbjct: 528 SKCGMIEEAEKIHSRFFQRANVS--GTMEELEKMH 560
Score = 138 bits (348), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 105/456 (23%), Positives = 197/456 (43%), Gaps = 77/456 (16%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E++L R C+ +S+G QI+ L KS L + + N+ I++Y KC +++A +FD
Sbjct: 382 EISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFD 441
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
D V+ N +I+ + +N + G+ E L +
Sbjct: 442 EMRRRDAVSWNAIIAAHEQNGK------------------------GY-------ETLFL 470
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
F M + P+E T S++ + G + +H ++K + + +L++MY
Sbjct: 471 FVSMLRSRIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSK 529
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
C + EA + +R VS G +E ++ + + VSW ++I GY
Sbjct: 530 CGMIEEAEKIHSRFFQRANVS-----------GTMEELEKMHNKRLQEMCVSWNSIISGY 578
Query: 263 LQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD 322
+ E+ +A ++ M+ GI P+ ++ C + G G QIH+ ++K
Sbjct: 579 VMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDV 638
Query: 323 FIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKR 382
+I +T++ Y+ CG ++ +RL FE ++ +WNA+I G+ +G E+A QLF
Sbjct: 639 YICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFER---- 694
Query: 383 DVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAH 442
M+ +KPN +T +S+ A A G + +G +
Sbjct: 695 ---------------------------MILENIKPNHVTFISILRACAHMGLIDKG-LEY 726
Query: 443 EYVLNNSITLNDNLS--AAIIDMYAKCGSINTAFEV 476
Y++ L+ L + ++D+ K G + A E+
Sbjct: 727 FYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALEL 762
>gi|242082744|ref|XP_002441797.1| hypothetical protein SORBIDRAFT_08g002505 [Sorghum bicolor]
gi|241942490|gb|EES15635.1| hypothetical protein SORBIDRAFT_08g002505 [Sorghum bicolor]
Length = 839
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 184/638 (28%), Positives = 308/638 (48%), Gaps = 95/638 (14%)
Query: 25 ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSC 84
A S R C+A +S +Q+H+ K+ ++ + +++++YAK
Sbjct: 239 AYASVFRSCAAITCLSTARQLHAHAIKNKFSADRVVGTAIVDVYAKA------------- 285
Query: 85 STLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFR 144
D L DAR F P + +M++G + EAL++F+
Sbjct: 286 ------------------DSLVDARRAFFSLPNHTVQACNAMMVGLVRTGLGAEALQLFQ 327
Query: 145 DMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCS 204
M G+ + V+L+ V S+ + G + +H L IK D V + +L++Y C
Sbjct: 328 FMTRSGIGFDVVSLSGVFSACAEVKGYLQGLQVHCLAIKSGFDVDVCVRNAILDLYGKCK 387
Query: 205 SLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQ 264
+LVEA +F EM++R D VSW +I Q
Sbjct: 388 ALVEAYLVFQEMEQR-------------------------------DSVSWNAIIAALEQ 416
Query: 265 VERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFI 324
E + + ML G+ P+D ++ AC + G +H +K+G F+
Sbjct: 417 NECYEDTIAYLNEMLRYGMEPDDFTYGSVLKACAGLQSLEYGSVVHGKAIKSGLGLDAFV 476
Query: 325 QATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDV 384
+T++ Y CG MI +A++L + + +++
Sbjct: 477 SSTVVDMYCKCG-------------------------------MITEAQKLHDRIGGQEL 505
Query: 385 YSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEY 444
SW+++ISG++ N+Q A + F M+D GVKP+ T +V A+ T++ G+ H
Sbjct: 506 VSWNSIISGFSLNKQSEEAQKFFSEMLDIGVKPDHFTYATVLDTCANLATIELGKQIHGQ 565
Query: 445 VLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDAN 504
++ + ++ +S+ ++DMYAKCG++ + +F + + WNA+ICG A+HG
Sbjct: 566 IIKQEMLGDEYISSTLVDMYAKCGNMPDSLLMFE--KAQKLDFVSWNAMICGYALHGQGF 623
Query: 505 LTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCM 564
L+++ +++ N+ N TF+ VL C H GL+D G RYF M S Y +EP L+H+ CM
Sbjct: 624 EALEMFERMQQANVVPNHATFVAVLRACSHVGLLDDGCRYFYLMTSRYKLEPQLEHFACM 683
Query: 565 VDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHG 624
VD+LGR+ ++A + IRSMP++AD VIW TLL+ +I +VEV E AA ++ L P
Sbjct: 684 VDILGRSKGPQEALKFIRSMPLEADAVIWKTLLSICKIRQDVEVAETAASNVLRLDPDDS 743
Query: 625 PSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
+LLSN+YA++G+W D R+ MR +K+ PG S
Sbjct: 744 SVYILLSNVYAESGKWVDVSRTRRLMRQGRLKKEPGCS 781
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 154/661 (23%), Positives = 276/661 (41%), Gaps = 113/661 (17%)
Query: 38 AVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMIS 97
A++ GQ H+ + SG TF+ N L+ +YA+CG + A+ +FD D V+ N M++
Sbjct: 19 ALATGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGAAHARGVFDVMPHRDTVSWNTMLT 78
Query: 98 GYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVT 157
Y A +F P VS+ +++ G+ Q +R+++ + +M GV P+ T
Sbjct: 79 AYAHAGDTGAAASLFGAMPDPDVVSWNALLSGYCQRGMFRDSVGLSVEMARRGVAPDRTT 138
Query: 158 LASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMK 217
LA ++ + L + +H + +K ++ V + L++MY C SL +A F M
Sbjct: 139 LAVLLKACGGLEDLALGVQIHAVAVKTGLEMDVRAGSALVDMYGKCRSLEDALRFFHGMG 198
Query: 218 ERNIVSWNVMLNGFAKAGLVELARELFERIP----------------------------- 248
ERN VSW + G + ELF ++
Sbjct: 199 ERNSVSWGAAIAGCVQNEQYTRGLELFVQMQRLGLGVSQPAYASVFRSCAAITCLSTARQ 258
Query: 249 ----------SKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLI---- 294
S D V ++D Y + + L +A + ++ + + M+V L+
Sbjct: 259 LHAHAIKNKFSADRVVGTAIVDVYAKADSLVDARRAFFSLPNHTVQACNAMMVGLVRTGL 318
Query: 295 ---------------------------SACGRAMAFGEGLQIHSIIVKAGFDCYDFIQAT 327
SAC + +GLQ+H + +K+GFD ++
Sbjct: 319 GAEALQLFQFMTRSGIGFDVVSLSGVFSACAEVKGYLQGLQVHCLAIKSGFDVDVCVRNA 378
Query: 328 IIHFYAACGRINLARLQF-ELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYS 386
I+ Y C + A L F E+ +D + SWNA+IA +N ED N M +
Sbjct: 379 ILDLYGKCKALVEAYLVFQEMEQRDSV-SWNAIIAALEQNECYEDTIAYLNEMLRY---- 433
Query: 387 WSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVL 446
G++P++ T SV A A +L+ G H +
Sbjct: 434 ---------------------------GMEPDDFTYGSVLKACAGLQSLEYGSVVHGKAI 466
Query: 447 NNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLT 506
+ + L+ +S+ ++DMY KCG I A ++ H R + WN+II G +++ +
Sbjct: 467 KSGLGLDAFVSSTVVDMYCKCGMITEAQKL--HDRIGGQELVSWNSIISGFSLNKQSEEA 524
Query: 507 LKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVD 566
K +S++ +K + T+ VL TC + ++LG++ + + D +VD
Sbjct: 525 QKFFSEMLDIGVKPDHFTYATVLDTCANLATIELGKQIHGQIIK-QEMLGDEYISSTLVD 583
Query: 567 LLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGN----VEVGERAAKSLAGLQPS 622
+ + G + D+ ++ K D V W ++ +HG +E+ ER + A + P+
Sbjct: 584 MYAKCGNMPDS-LLMFEKAQKLDFVSWNAMICGYALHGQGFEALEMFERMQQ--ANVVPN 640
Query: 623 H 623
H
Sbjct: 641 H 641
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 132/297 (44%), Gaps = 6/297 (2%)
Query: 290 IVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGI 349
+ L + GR+ A G H+ ++ +GF F+ ++ YA CG AR F++
Sbjct: 8 LYQLCAGAGRS-ALATGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGAAHARGVFDVMP 66
Query: 350 KDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHG 409
SWN ++ + G A LF M DV SW+A++SGY Q ++ L
Sbjct: 67 HRDTVSWNTMLTAYAHAGDTGAAASLFGAMPDPDVVSWNALLSGYCQRGMFRDSVGLSVE 126
Query: 410 MVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGS 469
M GV P+ T+ + A L G H + + ++ +A++DMY KC S
Sbjct: 127 MARRGVAPDRTTLAVLLKACGGLEDLALGVQIHAVAVKTGLEMDVRAGSALVDMYGKCRS 186
Query: 470 INTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVL 529
+ A F+ + +R SVS W A I G + L+++ +++ + ++ + V
Sbjct: 187 LEDALRFFHGMGER-NSVS-WGAAIAGCVQNEQYTRGLELFVQMQRLGLGVSQPAYASVF 244
Query: 530 STCCHAGLVDLGER-YFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMP 585
+C + + + ++K+ ++ + + +VD+ +A L DA S+P
Sbjct: 245 RSCAAITCLSTARQLHAHAIKNKFSADRVVGT--AIVDVYAKADSLVDARRAFFSLP 299
>gi|242058523|ref|XP_002458407.1| hypothetical protein SORBIDRAFT_03g032890 [Sorghum bicolor]
gi|241930382|gb|EES03527.1| hypothetical protein SORBIDRAFT_03g032890 [Sorghum bicolor]
Length = 695
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 186/559 (33%), Positives = 291/559 (52%), Gaps = 42/559 (7%)
Query: 108 AREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDM-RILGVIPN---EVTLASVIS 163
AR +FD P + + G ++ +E +EV + R G IP+ + L S
Sbjct: 127 ARHLFDVVPRPTAALCCAFLSGLSKLSLHQEFIEVVSSLHRRGGAIPSGCIPLVLKSCAQ 186
Query: 164 SSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVS 223
S+ G H LV ++ D FV T L++ Y + A F EM ++ +
Sbjct: 187 SAASCQGSQT--HCHALVRGMLGDVFV--QTALVDFYAKNGDMDSALMAFKEMPVKDPIP 242
Query: 224 WNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGI 283
N ++ G++K+G VE AR LF+ +P + SW +MI Y EALT++ ML +G
Sbjct: 243 MNCLITGYSKSGDVEEARRLFDSMPRRTSASWNSMIACYAHGGEFREALTLFDQMLREGA 302
Query: 284 APNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARL 343
+PN + I + S C + G + + I + + +Q I+H
Sbjct: 303 SPNAITITTVFSICAKTGDLDTGRRARAWIRE------EDLQNVIVH------------- 343
Query: 344 QFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMA 403
AL+ +++ I++AR F+ M +RDV +WS MI+GY+QN +P+ +
Sbjct: 344 -------------TALMEMYVKCRAIDEARHEFDRMPRRDVVAWSTMIAGYSQNGRPHES 390
Query: 404 LELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDM 463
LELF M KPNE+T+V V A A G+ + G Y+ + ++ L L +A+IDM
Sbjct: 391 LELFERMKATNCKPNEVTLVGVLSACAQLGSDELGEQIGNYIESQTLPLTSYLGSALIDM 450
Query: 464 YAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSI 523
Y KCG + A VF + + V WN++I GLA++G A + +Y + I+ N +
Sbjct: 451 YTKCGHVARARSVFNRMEQKV--VVTWNSMIRGLALNGFAEDAIALYRKMVGDGIQPNEV 508
Query: 524 TFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRS 583
TF+ +L+ C HAGLVD G +F+ MK +V P ++H C+VDLL ++G+L +A + I
Sbjct: 509 TFVALLTACTHAGLVDKGIAFFEEMKKKQHVSPQVEHCACIVDLLCKSGRLWEAYKFICD 568
Query: 584 MPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDA 643
M ++ + VIW TLL+A R H +VE+ + AA L L+P++ VLLSNIYADAG W D
Sbjct: 569 MEVEPNAVIWSTLLSACRAHADVELAKLAAGKLVALEPNNSSIYVLLSNIYADAGLWGDV 628
Query: 644 FSIRKEMRDCGMKRLPGFS 662
IR MR +++L +S
Sbjct: 629 REIRDLMRSKNLQKLSAYS 647
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 124/477 (25%), Positives = 208/477 (43%), Gaps = 65/477 (13%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
L+ C+ A QG Q H G+ + F+Q +L++ YAK G + A F DP
Sbjct: 181 LKSCAQSAASCQGSQTHCHALVRGMLGDVFVQTALVDFYAKNGDMDSALMAFKEMPVKDP 240
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
+ N +I+GY ++ + +AR +FD P + S+ SMI +A +REAL +F M
Sbjct: 241 IPMNCLITGYSKSGDVEEARRLFDSMPRRTSASWNSMIACYAHGGEFREALTLFDQMLRE 300
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
G PN +T+ +V S G + R + + + VI+ T L+ MY C ++ EA
Sbjct: 301 GASPNAITITTVFSICAKTGDLDTGRRARAWIREEDLQN-VIVHTALMEMYVKCRAIDEA 359
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLS 269
R FD M R++V+W+ M+ G+++ G + ELFER+
Sbjct: 360 RHEFDRMPRRDVVAWSTMIAGYSQNGRPHESLELFERM---------------------- 397
Query: 270 EALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATII 329
+A C PN+V +V ++SAC + + G QI + I ++ + +I
Sbjct: 398 ------KATNCK---PNEVTLVGVLSACAQLGSDELGEQIGNYIESQTLPLTSYLGSALI 448
Query: 330 HFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSA 389
Y CG + AR F + + +WN++I G NG ED
Sbjct: 449 DMYTKCGHVARARSVFNRMEQKVVVTWNSMIRGLALNGFAED------------------ 490
Query: 390 MISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG-RWAHEYVLNN 448
A+ L+ MV G++PNE+T V++ A +G + +G + E
Sbjct: 491 -------------AIALYRKMVGDGIQPNEVTFVALLTACTHAGLVDKGIAFFEEMKKKQ 537
Query: 449 SITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANL 505
++ A I+D+ K G + A++ + +V W+ ++ H D L
Sbjct: 538 HVSPQVEHCACIVDLLCKSGRLWEAYKFICDMEVEPNAVI-WSTLLSACRAHADVEL 593
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 99/221 (44%), Gaps = 33/221 (14%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E+ LV L C+ + G+QI + I L +++ ++LI++Y KCG +++A+S
Sbjct: 406 EVTLVGVLSACAQLGSDELGEQIGNYIESQTLPLTSYLGSALIDMYTKCGHVARARS--- 462
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
VF++ K V++ SMI G A N +A+ +
Sbjct: 463 ----------------------------VFNRMEQKVVVTWNSMIRGLALNGFAEDAIAL 494
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWE-CRMLHGLVIKLMIDGFVIISTNLLNMYC 201
+R M G+ PNEVT +++++ H G + + + K + V ++++ C
Sbjct: 495 YRKMVGDGIQPNEVTFVALLTACTHAGLVDKGIAFFEEMKKKQHVSPQVEHCACIVDLLC 554
Query: 202 VCSSLVEARSLFDEMK-ERNIVSWNVMLNGFAKAGLVELAR 241
L EA +M+ E N V W+ +L+ VELA+
Sbjct: 555 KSGRLWEAYKFICDMEVEPNAVIWSTLLSACRAHADVELAK 595
>gi|242087005|ref|XP_002439335.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
gi|241944620|gb|EES17765.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
Length = 886
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 206/667 (30%), Positives = 326/667 (48%), Gaps = 83/667 (12%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
L AL+ C + G H LI +G ESN F+
Sbjct: 149 HFTLPYALKACGELPSYRSGSAFHGLICCNGFESNVFV---------------------- 186
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFD---KTPIKCCVSYTSMIMGFAQNDCWREA 139
CN +++ Y R+ L DA VFD + I +S+ S++ + R A
Sbjct: 187 ---------CNALVAMYSRSGSLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTA 237
Query: 140 LEVFRDMRIL--GVIPNE----VTLASVISSSVHLGGIWECRMLHGLVIK--LMIDGFVI 191
L++F +M + NE +++ +++ + L + + + +H I+ D FV
Sbjct: 238 LDLFSEMTTIVHEKATNERSDIISIVNILPACASLKALPQTKEIHSYAIRNGTFADAFVC 297
Query: 192 ISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELF-----ER 246
L++ Y C S+ +A ++F+ M+ +++VSWN M+ G+ ++G A ELF E
Sbjct: 298 --NALIDTYAKCGSMKDAVNVFNVMEFKDVVSWNAMVTGYTQSGKFGAAFELFKNMRKEN 355
Query: 247 IPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEG 306
IP DV++W +I GY Q EAL ++ M+ G PN V I+ L+SAC A +G
Sbjct: 356 IP-LDVITWSAVIAGYAQRGYGQEALDTFQQMILYGSEPNSVTIISLLSACASLGALSQG 414
Query: 307 LQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRN 366
++ H+ +K ++L G + + NALI + +
Sbjct: 415 METHAYSLKKCL-------------------LSLDNDFGGDGDGEDLVVHNALIDMYSKC 455
Query: 367 GMIEDARQLFNNMQKRD--VYSWSAMISGYAQNEQPNMALELFHGMVDA--GVKPNEITM 422
+ AR +FN++ +R+ V +W+ MI GYAQ N AL+LF M+ V PN T+
Sbjct: 456 RSFKAARTIFNSIPRRERNVVTWTVMIGGYAQYGDSNDALKLFSEMISKPYAVAPNAYTI 515
Query: 423 VSVFCAIASSGTLKEGRWAHEYV-----LNNSITLNDNLSAAIIDMYAKCGSINTAFEVF 477
+ A A +L+ G+ H YV +S+ N +IDMY+KCG ++TA VF
Sbjct: 516 SCILMACAHLSSLRMGKQIHAYVTRHHEYESSVYFVAN---CLIDMYSKCGDVDTARNVF 572
Query: 478 YHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGL 537
+ R VS W +++ G MHG L I+ ++K + I+F+ +L C H+G+
Sbjct: 573 DSMPKRN-EVS-WTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYACSHSGM 630
Query: 538 VDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLL 597
VD G YF M+S Y V +HY C++DLL R+G+L+ A + I+ MPM+ IW LL
Sbjct: 631 VDQGLDYFDIMRSDYGVIASAQHYACVIDLLARSGRLDKAWKTIQEMPMEPSAAIWVALL 690
Query: 598 AASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKR 657
+A R+H NVE+ E A L ++ + S L+SNIYA A RW+D IR+ M+ G+K+
Sbjct: 691 SACRVHSNVELAEYALNKLVSMKAENDGSYTLISNIYATARRWKDVARIRQLMKKSGIKK 750
Query: 658 LPGFSGV 664
PG S V
Sbjct: 751 RPGCSWV 757
Score = 186 bits (471), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 157/611 (25%), Positives = 268/611 (43%), Gaps = 82/611 (13%)
Query: 26 LVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCS 85
S L+ C + V+ +QIH I GL L L+S + S S
Sbjct: 34 FASLLKECRS---VNTVRQIHQKIIAYGL------------LSYPASLLSVSLPPLPSHS 78
Query: 86 TLDPVACNI-MISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFR 144
+ P + +++ Y+ +DA V ++ V + ++ + A+ V
Sbjct: 79 YVSPKSLGTGVVASYLACGATSDALSVLERVVPSPAVWWNLLVRAHIEEGRLDRAIGVSC 138
Query: 145 DMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCS 204
M G P+ TL + + L HGL+ + V + L+ MY
Sbjct: 139 RMLRAGTKPDHFTLPYALKACGELPSYRSGSAFHGLICCNGFESNVFVCNALVAMYSRSG 198
Query: 205 SLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQ 264
SL +A +FDE+ + I DV+SW +++ +++
Sbjct: 199 SLEDASLVFDEITRKGI----------------------------DDVISWNSIVAAHVK 230
Query: 265 VERLSEALTMYRAM--LCDGIAPND----VMIVDLISACGRAMAFGEGLQIHSIIVKAGF 318
AL ++ M + A N+ + IV+++ AC A + +IHS ++ G
Sbjct: 231 GSNPRTALDLFSEMTTIVHEKATNERSDIISIVNILPACASLKALPQTKEIHSYAIRNGT 290
Query: 319 DCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNN 378
F+ +I YA CG + A F + + SWNA++ G+ ++G A +LF N
Sbjct: 291 FADAFVCNALIDTYAKCGSMKDAVNVFNVMEFKDVVSWNAMVTGYTQSGKFGAAFELFKN 350
Query: 379 MQKR----DVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGT 434
M+K DV +WSA+I+GYAQ AL+ F M+ G +PN +T++S+ A AS G
Sbjct: 351 MRKENIPLDVITWSAVIAGYAQRGYGQEALDTFQQMILYGSEPNSVTIISLLSACASLGA 410
Query: 435 LKEGRWAHEYVLNNS-ITLNDN-----------LSAAIIDMYAKCGSINTAFEVFYHIRD 482
L +G H Y L ++L+++ + A+IDMY+KC S A +F I
Sbjct: 411 LSQGMETHAYSLKKCLLSLDNDFGGDGDGEDLVVHNALIDMYSKCRSFKAARTIFNSIPR 470
Query: 483 RTTSVSPWNAIICGLAMHGDANLTLKIYSDL--EKRNIKLNSITFIGVLSTCCHAGLVDL 540
R +V W +I G A +GD+N LK++S++ + + N+ T +L C H + +
Sbjct: 471 RERNVVTWTVMIGGYAQYGDSNDALKLFSEMISKPYAVAPNAYTISCILMACAHLSSLRM 530
Query: 541 GE-------RYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIW 593
G+ R+ + SVY V C++D+ + G ++ A V SMP K + V W
Sbjct: 531 GKQIHAYVTRHHEYESSVYFVA------NCLIDMYSKCGDVDTARNVFDSMP-KRNEVSW 583
Query: 594 GTLLAASRIHG 604
++++ +HG
Sbjct: 584 TSMMSGYGMHG 594
Score = 166 bits (419), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 129/531 (24%), Positives = 249/531 (46%), Gaps = 91/531 (17%)
Query: 1 TPLDHFHSVFN--SQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNT 58
T LD F + +KA + SD +++V+ L C++ A+ Q ++IHS ++G ++
Sbjct: 236 TALDLFSEMTTIVHEKATNERSDI-ISIVNILPACASLKALPQTKEIHSYAIRNGTFADA 294
Query: 59 FIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVF-----D 113
F+ N+LI+ YAKCG + A ++F+ D V+ N M++GY ++ + A E+F +
Sbjct: 295 FVCNALIDTYAKCGSMKDAVNVFNVMEFKDVVSWNAMVTGYTQSGKFGAAFELFKNMRKE 354
Query: 114 KTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWE 173
P+ ++++++I G+AQ +EAL+ F+ M + G PN VT+ S++S+ LG + +
Sbjct: 355 NIPLD-VITWSAVIAGYAQRGYGQEALDTFQQMILYGSEPNSVTIISLLSACASLGALSQ 413
Query: 174 CRMLHGLVIKLMIDGF------------VIISTNLLNMYCVCSSLVEARSLFDEM--KER 219
H +K + +++ L++MY C S AR++F+ + +ER
Sbjct: 414 GMETHAYSLKKCLLSLDNDFGGDGDGEDLVVHNALIDMYSKCRSFKAARTIFNSIPRRER 473
Query: 220 NIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAML 279
N+V+W VM+ G+A+ G A +LF + SK
Sbjct: 474 NVVTWTVMIGGYAQYGDSNDALKLFSEMISKPY--------------------------- 506
Query: 280 CDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD----FIQATIIHFYAAC 335
+APN I ++ AC + G QIH+ + + Y+ F+ +I Y+ C
Sbjct: 507 --AVAPNAYTISCILMACAHLSSLRMGKQIHAYVTR--HHEYESSVYFVANCLIDMYSKC 562
Query: 336 GRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYA 395
G ++ AR F+ K + SW ++++G+ +G ++A +F+ MQK
Sbjct: 563 GDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQK-------------- 608
Query: 396 QNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNN-SITLND 454
AG P++I+ + + A + SG + +G + + ++ + +
Sbjct: 609 -----------------AGFVPDDISFLVLLYACSHSGMVDQGLDYFDIMRSDYGVIASA 651
Query: 455 NLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANL 505
A +ID+ A+ G ++ A++ + S + W A++ +H + L
Sbjct: 652 QHYACVIDLLARSGRLDKAWKTIQEM-PMEPSAAIWVALLSACRVHSNVEL 701
>gi|242064134|ref|XP_002453356.1| hypothetical protein SORBIDRAFT_04g004500 [Sorghum bicolor]
gi|241933187|gb|EES06332.1| hypothetical protein SORBIDRAFT_04g004500 [Sorghum bicolor]
Length = 807
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 198/684 (28%), Positives = 321/684 (46%), Gaps = 107/684 (15%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
L S L C A A+ G++ H L K GL+ N F++N L+ +Y KCG ++ A +FD
Sbjct: 143 FTLASVLSACGAVAALDDGRRCHGLAVKVGLDGNQFVENGLLGMYTKCGSVADAVRLFDW 202
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
S+ + V S+T+M+ G AQ+ +AL +F
Sbjct: 203 MSSPNEV-------------------------------SFTAMMGGLAQSGAVDDALRLF 231
Query: 144 RDMRILGVIPNEVTLASVISSSVHL--------GGIWECRMLHGLVIKLMIDGFVIISTN 195
M + + V ++SV+ + I + +H LV++ D + +
Sbjct: 232 ARMSRSAIRVDPVAVSSVLGACAQACAGDYNVARAIRLAQSIHALVVRKGFDSDQHVGNS 291
Query: 196 LLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELA--------------- 240
L++MY + EA +F+ M +IVSWN+++ G+ + G E A
Sbjct: 292 LIDMYAKGMKMDEAMKVFESMSSVSIVSWNILVTGYGQLGCYERALEVLDLMQESGFEPN 351
Query: 241 --------------------RELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLC 280
R +F++I V +W T++ GY Q E + + ++R M
Sbjct: 352 EVTYSNMLASCIKARDVPSARAMFDKISKPSVTTWNTLLSGYGQEELHQDTIELFRRMQH 411
Query: 281 DGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINL 340
+ P+ + ++S C R G Q+HS VK F+ + +I Y+ CG++ +
Sbjct: 412 QNVQPDRTTLAVILSTCSRLGILELGKQVHSASVKLLLHNDMFVASGLIDMYSKCGQVGI 471
Query: 341 ARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQP 400
A++ +FN M +RDV W++MISG A +
Sbjct: 472 AQI-------------------------------IFNMMTERDVVCWNSMISGLAIHSLN 500
Query: 401 NMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAI 460
A + F M + G+ P E + S+ + A ++ +GR H VL + N + +++
Sbjct: 501 EEAFDFFKQMRENGMFPTESSYASMINSCARLSSIPQGRQIHAQVLKDGYDQNVYVGSSL 560
Query: 461 IDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKL 520
IDMYAKCG+++ A +F++ ++ WN +I G A +G ++++ + K
Sbjct: 561 IDMYAKCGNMDDA-RLFFNCM-IVKNIVAWNEMIHGYAQNGFGEKAVELFEYMLTTKQKP 618
Query: 521 NSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEV 580
+S+TFI VL+ C H+GLVD YF SM+S Y + P ++HY C++D LGRAG+ + V
Sbjct: 619 DSVTFIAVLTGCSHSGLVDEAIAYFNSMESNYGIRPLVEHYTCLIDALGRAGRFAEVVAV 678
Query: 581 IRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRW 640
I MP K D ++W LLAA +H N E+GE AAK L L P + VLLSNIYA GR
Sbjct: 679 IDKMPYKDDAILWEVLLAACVVHHNAELGEFAAKHLFRLDPKNPSPYVLLSNIYATLGRH 738
Query: 641 EDAFSIRKEMRDCGMKRLPGFSGV 664
DA ++R M G+ + G+S V
Sbjct: 739 GDASAVRALMSSRGVVKGRGYSWV 762
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 155/612 (25%), Positives = 274/612 (44%), Gaps = 87/612 (14%)
Query: 49 IFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDA 108
+ +GL ++TF+ N L+ LY+ GL A F + + + N IS R L A
Sbjct: 36 VLAAGLAADTFLLNRLVELYSLSGLPCHALRAFRALPRPNVYSYNAAISAACRAGDLAAA 95
Query: 109 REVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHL 168
R++ + P + VS+ ++I A++D EALE++R M G+ P TLASV+S+ +
Sbjct: 96 RDLLGRMPDRNAVSWNTVIAAVARSDSPGEALEMYRGMLQEGLAPTNFTLASVLSACGAV 155
Query: 169 GGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVML 228
+ + R HGL +K+ +DG + LL MY C S+ +A LFD M N VS+ M+
Sbjct: 156 AALDDGRRCHGLAVKVGLDGNQFVENGLLGMYTKCGSVADAVRLFDWMSSPNEVSFTAMM 215
Query: 229 NGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDV 288
G A++G V+ A LF R M R+ I + V
Sbjct: 216 GGLAQSGAVDDALRLFAR---------------------------MSRS----AIRVDPV 244
Query: 289 MIVDLISACGRAMAFGEGL--------QIHSIIVKAGFDCYDFIQATIIHFYAACGRINL 340
+ ++ AC +A A + IH+++V+ GFD + ++I YA +++
Sbjct: 245 AVSSVLGACAQACAGDYNVARAIRLAQSIHALVVRKGFDSDQHVGNSLIDMYAKGMKMDE 304
Query: 341 ARLQFELGIKDHIASWNALIAGFIRNGMIE------------------------------ 370
A FE I SWN L+ G+ + G E
Sbjct: 305 AMKVFESMSSVSIVSWNILVTGYGQLGCYERALEVLDLMQESGFEPNEVTYSNMLASCIK 364
Query: 371 -----DARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSV 425
AR +F+ + K V +W+ ++SGY Q E +ELF M V+P+ T+ +
Sbjct: 365 ARDVPSARAMFDKISKPSVTTWNTLLSGYGQEELHQDTIELFRRMQHQNVQPDRTTLAVI 424
Query: 426 FCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTT 485
+ G L+ G+ H + + + +++ +IDMY+KCG + A +F + +R
Sbjct: 425 LSTCSRLGILELGKQVHSASVKLLLHNDMFVASGLIDMYSKCGQVGIAQIIFNMMTER-- 482
Query: 486 SVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGER-Y 544
V WN++I GLA+H + + + + ++ ++++C + G + +
Sbjct: 483 DVVCWNSMISGLAIHSLNEEAFDFFKQMRENGMFPTESSYASMINSCARLSSIPQGRQIH 542
Query: 545 FKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHG 604
+ +K Y + ++ ++D+ + G ++DA M +K ++V W + IHG
Sbjct: 543 AQVLKDGY--DQNVYVGSSLIDMYAKCGNMDDARLFFNCMIVK-NIVAWNEM-----IHG 594
Query: 605 NVE--VGERAAK 614
+ GE+A +
Sbjct: 595 YAQNGFGEKAVE 606
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 113/270 (41%), Gaps = 44/270 (16%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E + S + C+ ++ QG+QIH+ + K G + N ++ +SLI++YAKCG + A+ F+
Sbjct: 519 ESSYASMINSCARLSSIPQGRQIHAQVLKDGYDQNVYVGSSLIDMYAKCGNMDDARLFFN 578
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+ VA N MI GY AQN +A+E+
Sbjct: 579 CMIVKNIVAWNEMIHGY-------------------------------AQNGFGEKAVEL 607
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWEC-----RMLHGLVIKLMIDGFVIISTNLL 197
F M P+ VT +V++ H G + E M I+ +++ + T L+
Sbjct: 608 FEYMLTTKQKPDSVTFIAVLTGCSHSGLVDEAIAYFNSMESNYGIRPLVEHY----TCLI 663
Query: 198 NMYCVCSSLVEARSLFDEMKER-NIVSWNVMLNG---FAKAGLVELARELFERIPSKDVV 253
+ E ++ D+M + + + W V+L A L E A + R+ K+
Sbjct: 664 DALGRAGRFAEVVAVIDKMPYKDDAILWEVLLAACVVHHNAELGEFAAKHLFRLDPKNPS 723
Query: 254 SWGTMIDGYLQVERLSEALTMYRAMLCDGI 283
+ + + Y + R +A + M G+
Sbjct: 724 PYVLLSNIYATLGRHGDASAVRALMSSRGV 753
>gi|115434844|ref|NP_001042180.1| Os01g0176300 [Oryza sativa Japonica Group]
gi|11034538|dbj|BAB17062.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113531711|dbj|BAF04094.1| Os01g0176300 [Oryza sativa Japonica Group]
gi|125569234|gb|EAZ10749.1| hypothetical protein OsJ_00586 [Oryza sativa Japonica Group]
Length = 665
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 160/412 (38%), Positives = 245/412 (59%), Gaps = 6/412 (1%)
Query: 253 VSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSI 312
V W +I G+ + R + + M+ V V ++SACG+ G+Q+H
Sbjct: 127 VMWNALISGHNRSGRFELSCCSFVDMVRASAMATAVTYVSVLSACGKGKDLLLGMQVHKR 186
Query: 313 IVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDA 372
++++G ++ ++ YA CG ++ A + FE +ASW ++I+G +R+G ++ A
Sbjct: 187 VLESGVLPDQRVENALVDMYAECGDMDAAWVLFEGMQMRSMASWTSVISGLVRSGQVDRA 246
Query: 373 RQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASS 432
R LF++M +RD +W+AMI GY Q + ALE F M V+ +E TMVSV A A
Sbjct: 247 RDLFDHMPERDTIAWTAMIDGYVQVGRFRDALETFRYMQICKVRADEFTMVSVVTACAQL 306
Query: 433 GTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVF--YHIRDRTTSVSPW 490
G L+ G WA Y+ I ++ + A+IDMY+KCGSI A +VF H RD+ T W
Sbjct: 307 GALETGEWARIYMGRLGIKMDVFVGNALIDMYSKCGSIERALDVFKDMHNRDKFT----W 362
Query: 491 NAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKS 550
AII GLA++G + ++ + + + +TF+GVL+ C HAGLVD G +F SM
Sbjct: 363 TAIILGLAVNGRGEEAIDMFYRMLRALQTPDEVTFVGVLTACTHAGLVDKGREFFLSMTE 422
Query: 551 VYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGE 610
YN+ P + HYGC++D+LGRAG+L++A + I MPMK + IWGTLLA+ R++GN E+GE
Sbjct: 423 AYNISPTVVHYGCLIDVLGRAGKLKEALDTIDKMPMKPNSTIWGTLLASCRVYGNSEIGE 482
Query: 611 RAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
AA+ L L P + + +LLSN+YA + RW+D IR+ + + G+K+ PG S
Sbjct: 483 LAAERLLELDPDNSTAYILLSNMYAKSNRWKDVRRIRQIIMEKGIKKEPGCS 534
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 123/471 (26%), Positives = 216/471 (45%), Gaps = 78/471 (16%)
Query: 45 IHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD----SCSTLDPVACNIMISGYI 100
IH+ + K G+ESN +SLI +YA G + A+++ + + PV N +ISG+
Sbjct: 78 IHAHVVKFGMESNAHAASSLIVMYAARGDGAAARAVLEAACLATGGGAPVMWNALISGHN 137
Query: 101 RNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLAS 160
R+ R + CC F DM + VT S
Sbjct: 138 RSGRFE----------LSCC---------------------SFVDMVRASAMATAVTYVS 166
Query: 161 VISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERN 220
V+S+ + +H V++ + + L++MY C + A LF+ M+ R+
Sbjct: 167 VLSACGKGKDLLLGMQVHKRVLESGVLPDQRVENALVDMYAECGDMDAAWVLFEGMQMRS 226
Query: 221 IVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLC 280
+ SW +++G ++G V+ AR+LF+ +P +D ++W MIDGY+QV R +AL +R M
Sbjct: 227 MASWTSVISGLVRSGQVDRARDLFDHMPERDTIAWTAMIDGYVQVGRFRDALETFRYMQI 286
Query: 281 DGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINL 340
+ ++ +V +++AC + A G RI +
Sbjct: 287 CKVRADEFTMVSVVTACAQLGALETG---------------------------EWARIYM 319
Query: 341 ARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQP 400
R LGIK + NALI + + G IE A +F +M RD ++W+A+I G A N +
Sbjct: 320 GR----LGIKMDVFVGNALIDMYSKCGSIERALDVFKDMHNRDKFTWTAIILGLAVNGRG 375
Query: 401 NMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAI 460
A+++F+ M+ A P+E+T V V A +G + +GR E+ L S+T N+S +
Sbjct: 376 EEAIDMFYRMLRALQTPDEVTFVGVLTACTHAGLVDKGR---EFFL--SMTEAYNISPTV 430
Query: 461 ------IDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANL 505
ID+ + G + A + + + S + W ++ ++G++ +
Sbjct: 431 VHYGCLIDVLGRAGKLKEALDTIDKMPMKPNS-TIWGTLLASCRVYGNSEI 480
Score = 122 bits (305), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 144/286 (50%), Gaps = 5/286 (1%)
Query: 27 VSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCST 86
VS L C + G Q+H + +SG+ + ++N+L+++YA+CG + A +F+
Sbjct: 165 VSVLSACGKGKDLLLGMQVHKRVLESGVLPDQRVENALVDMYAECGDMDAAWVLFEGMQM 224
Query: 87 LDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDM 146
+ +ISG +R+ +++ AR++FD P + +++T+MI G+ Q +R+ALE FR M
Sbjct: 225 RSMASWTSVISGLVRSGQVDRARDLFDHMPERDTIAWTAMIDGYVQVGRFRDALETFRYM 284
Query: 147 RILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSL 206
+I V +E T+ SV+++ LG + + +L I V + L++MY C S+
Sbjct: 285 QICKVRADEFTMVSVVTACAQLGALETGEWARIYMGRLGIKMDVFVGNALIDMYSKCGSI 344
Query: 207 VEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFER----IPSKDVVSWGTMIDGY 262
A +F +M R+ +W ++ G A G E A ++F R + + D V++ ++
Sbjct: 345 ERALDVFKDMHNRDKFTWTAIILGLAVNGRGEEAIDMFYRMLRALQTPDEVTFVGVLTAC 404
Query: 263 LQVERLSEALTMYRAML-CDGIAPNDVMIVDLISACGRAMAFGEGL 307
+ + + +M I+P V LI GRA E L
Sbjct: 405 THAGLVDKGREFFLSMTEAYNISPTVVHYGCLIDVLGRAGKLKEAL 450
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/266 (20%), Positives = 109/266 (40%), Gaps = 36/266 (13%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E +VS + C+ A+ G+ + + G++ + F+ N+LI++Y+KCG I +A +F
Sbjct: 293 EFTMVSVVTACAQLGALETGEWARIYMGRLGIKMDVFVGNALIDMYSKCGSIERALDVFK 352
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
D ++T++I+G A N EA+++
Sbjct: 353 DMHNRDK-------------------------------FTWTAIILGLAVNGRGEEAIDM 381
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECR-MLHGLVIKLMIDGFVIISTNLLNMYC 201
F M P+EVT V+++ H G + + R + I V+ L+++
Sbjct: 382 FYRMLRALQTPDEVTFVGVLTACTHAGLVDKGREFFLSMTEAYNISPTVVHYGCLIDVLG 441
Query: 202 VCSSLVEARSLFDEMKER-NIVSWNVMLNG---FAKAGLVELARELFERIPSKDVVSWGT 257
L EA D+M + N W +L + + + ELA E + + ++
Sbjct: 442 RAGKLKEALDTIDKMPMKPNSTIWGTLLASCRVYGNSEIGELAAERLLELDPDNSTAYIL 501
Query: 258 MIDGYLQVERLSEALTMYRAMLCDGI 283
+ + Y + R + + + ++ GI
Sbjct: 502 LSNMYAKSNRWKDVRRIRQIIMEKGI 527
>gi|297742136|emb|CBI33923.3| unnamed protein product [Vitis vinifera]
Length = 461
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 168/442 (38%), Positives = 241/442 (54%), Gaps = 64/442 (14%)
Query: 283 IAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLAR 342
+APN L+ C + G+G +IH+ I+K GF+ F++ ++IH Y+ CGRI AR
Sbjct: 6 VAPNHYTFPLLVKVCWEIGSIGDGEKIHARILKFGFELDLFVRNSLIHMYSVCGRIGDAR 65
Query: 343 LQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGY-------- 394
FE+ + +WN++I G+++NG I AR+LF M +RD++SW++MI+GY
Sbjct: 66 AMFEVCSISDLVTWNSMIDGYVKNGEIGAARELFEEMPERDLFSWNSMIAGYVGNGDMTA 125
Query: 395 -----------------------AQNEQPNMALELFHGMVDAGV---------------- 415
AQ + +A ELF+ M V
Sbjct: 126 AEDLFNKMPFRDIVSWNCMIDGYAQVQNMEIACELFNWMPYRNVVSWNIMLALYVRIKDY 185
Query: 416 --------------KPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNL-SAAI 460
PNE T+VSV A A G L G+W H Y+ NN + D L S A+
Sbjct: 186 DECLRMFDKMMGETMPNEATLVSVLTACAHLGRLDRGKWIHSYIKNNRVIEPDVLLSTAL 245
Query: 461 IDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKL 520
+ MYAKCG+++ A +VF + +R SV WN++I G MHG A+ L+++ D+EKR
Sbjct: 246 LTMYAKCGAMDLARDVFDKMSNR--SVVSWNSMIMGYGMHGQADKALEMFLDMEKRGPMP 303
Query: 521 NSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEV 580
N TFI VLS C H+G++ G YF M+ Y +EP ++HYGCMVDLLGRAG ++D EE+
Sbjct: 304 NDATFICVLSACAHSGMILEGWWYFDLMRRAYKIEPKVEHYGCMVDLLGRAGLMKDLEEL 363
Query: 581 IRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRW 640
IR MPM+ +WG LL+A R H N E+ E AK L L+P +LLSNIYA G+W
Sbjct: 364 IRKMPMEGGTALWGALLSACRTHSNSELAEIVAKRLIELEPRDIGPYLLLSNIYAAEGKW 423
Query: 641 EDAFSIRKEMRDCGMKRLPGFS 662
+D +RK M++ G+ + G S
Sbjct: 424 DDVEIVRKMMKERGLTKTTGLS 445
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 128/495 (25%), Positives = 214/495 (43%), Gaps = 110/495 (22%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
++ C ++ G++IH+ I K G E + F++NSLI++Y+ CG I A++MF+ CS D
Sbjct: 17 VKVCWEIGSIGDGEKIHARILKFGFELDLFVRNSLIHMYSVCGRIGDARAMFEVCSISDL 76
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
V N MI GY++N + ARE+F++ P + S+ SMI G+ N A ++F
Sbjct: 77 VTWNSMIDGYVKNGEIGAARELFEEMPERDLFSWNSMIAGYVGNGDMTAAEDLF------ 130
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
N++ ++S W C MIDG+ + NM C
Sbjct: 131 ----NKMPFRDIVS--------WNC----------MIDGYAQVQ----NMEIAC------ 158
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLS 269
LF+ M RN+VSWN+ML L+ RI D
Sbjct: 159 -ELFNWMPYRNVVSWNIML-------------ALYVRIKDYD------------------ 186
Query: 270 EALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQAT-I 328
E L M+ M+ + + PN+ +V +++AC G IHS I D + +T +
Sbjct: 187 ECLRMFDKMMGETM-PNEATLVSVLTACAHLGRLDRGKWIHSYIKNNRVIEPDVLLSTAL 245
Query: 329 IHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWS 388
+ YA CG ++LAR F+ + SWN++I G+ +G + A ++F +M+KR
Sbjct: 246 LTMYAKCGAMDLARDVFDKMSNRSVVSWNSMIMGYGMHGQADKALEMFLDMEKR------ 299
Query: 389 AMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNN 448
G PN+ T + V A A SG + EG W + ++
Sbjct: 300 -------------------------GPMPNDATFICVLSACAHSGMILEGWWYFD-LMRR 333
Query: 449 SITLNDNLS--AAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGD---A 503
+ + + ++D+ + G + E+ + + W A++ H + A
Sbjct: 334 AYKIEPKVEHYGCMVDLLGRAGLMKDLEELIRKM-PMEGGTALWGALLSACRTHSNSELA 392
Query: 504 NLTLKIYSDLEKRNI 518
+ K +LE R+I
Sbjct: 393 EIVAKRLIELEPRDI 407
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 71/152 (46%), Gaps = 32/152 (21%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSG-LESNTFIQNSLINLYAKCGLISQAKSMF 81
E LVS L C+ + +G+ IHS I + +E + + +L+ +YAKCG
Sbjct: 203 EATLVSVLTACAHLGRLDRGKWIHSYIKNNRVIEPDVLLSTALLTMYAKCGA-------- 254
Query: 82 DSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALE 141
++ AR+VFDK + VS+ SMIMG+ + +ALE
Sbjct: 255 -----------------------MDLARDVFDKMSNRSVVSWNSMIMGYGMHGQADKALE 291
Query: 142 VFRDMRILGVIPNEVTLASVISSSVHLGGIWE 173
+F DM G +PN+ T V+S+ H G I E
Sbjct: 292 MFLDMEKRGPMPNDATFICVLSACAHSGMILE 323
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 88/194 (45%), Gaps = 22/194 (11%)
Query: 410 MVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGS 469
MV V PN T + G++ +G H +L L+ + ++I MY+ CG
Sbjct: 1 MVRKCVAPNHYTFPLLVKVCWEIGSIGDGEKIHARILKFGFELDLFVRNSLIHMYSVCGR 60
Query: 470 INTAFEVFY--HIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNI-KLNSITFI 526
I A +F I D T WN++I G +G+ +++ ++ +R++ NS+
Sbjct: 61 IGDARAMFEVCSISDLVT----WNSMIDGYVKNGEIGAARELFEEMPERDLFSWNSMI-- 114
Query: 527 GVLSTCCHAGLVDLGERYFKSMKSVYNVEP--DLKHYGCMVDLLGRAGQLEDAEEVIRSM 584
AG V G+ + + ++N P D+ + CM+D + +E A E+ M
Sbjct: 115 --------AGYVGNGD--MTAAEDLFNKMPFRDIVSWNCMIDGYAQVQNMEIACELFNWM 164
Query: 585 PMKADVVIWGTLLA 598
P + +VV W +LA
Sbjct: 165 PYR-NVVSWNIMLA 177
>gi|168017714|ref|XP_001761392.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687398|gb|EDQ73781.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 833
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 184/637 (28%), Positives = 307/637 (48%), Gaps = 95/637 (14%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+ +S L CS+ ++ G+++H+ + +G S+ I +L+++Y K G + A+ +FD
Sbjct: 159 ITFLSVLDACSSPAGLNWGKEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDG 218
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
D N+M+ GY A++ W +A E+F
Sbjct: 219 LHIRDVSTFNVMVGGY-------------------------------AKSGDWEKAFELF 247
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
M+ +G+ PN+++ S++ + + +H + + + ++T+L+ MY C
Sbjct: 248 YRMQQVGLKPNKISFLSILDGCWTPEALAWGKAVHAQCMNAGLVDDIRVATSLIRMYTTC 307
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYL 263
S+ AR +FD MK R++VSW VM+ G+A+ G +E
Sbjct: 308 GSIEGARRVFDNMKVRDVVSWTVMIEGYAENGNIE------------------------- 342
Query: 264 QVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDF 323
+A ++ M +GI P+ + + +++AC + +IHS + AGF
Sbjct: 343 ------DAFGLFATMQEEGIQPDRITYMHIMNACAISANLNHAREIHSQVDIAGFGTDLL 396
Query: 324 IQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRD 383
+ ++H YA CG I AR F+ + + SW+A+I ++ NG +
Sbjct: 397 VSTALVHMYAKCGAIKDARQVFDAMPRRDVVSWSAMIGAYVENGYGTE------------ 444
Query: 384 VYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHE 443
A E FH M + ++P+ +T +++ A G L G +
Sbjct: 445 -------------------AFETFHLMKRSNIEPDGVTYINLLNACGHLGALDVGMEIYT 485
Query: 444 YVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDA 503
+ + + L A+I M AK GS+ A +F + R V WNA+I G ++HG+A
Sbjct: 486 QAIKADLVSHVPLGNALIIMNAKHGSVERARYIFDTMVRR--DVITWNAMIGGYSLHGNA 543
Query: 504 NLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGC 563
L ++ + K + NS+TF+GVLS C AG VD G R+F + + P +K YGC
Sbjct: 544 REALYLFDRMLKERFRPNSVTFVGVLSACSRAGFVDEGRRFFTYLLEGRGIVPTVKLYGC 603
Query: 564 MVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSH 623
MVDLLGRAG+L++AE +I+SMP+K IW +LL A RIHGN++V ERAA+ + P
Sbjct: 604 MVDLLGRAGELDEAELLIKSMPVKPTSSIWSSLLVACRIHGNLDVAERAAERCLMIDPYD 663
Query: 624 GPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPG 660
G V LS++YA AG WE+ +RK M G+++ G
Sbjct: 664 GAVYVQLSHMYAAAGMWENVAKVRKVMESRGIRKEQG 700
Score = 192 bits (487), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 147/581 (25%), Positives = 259/581 (44%), Gaps = 101/581 (17%)
Query: 27 VSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCST 86
V + C+ + G+Q+ I + G + N + N+LI LY+ CG +++A
Sbjct: 61 VKLFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNTLIKLYSICGNVTEA--------- 111
Query: 87 LDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDM 146
R++FD K V++ ++I G+AQ +EA +FR M
Sbjct: 112 ----------------------RQIFDSVENKTVVTWNALIAGYAQVGHVKEAFALFRQM 149
Query: 147 RILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSL 206
G+ P+ +T SV+ + G+ + +H V+ I T L++MY S+
Sbjct: 150 VDEGLEPSIITFLSVLDACSSPAGLNWGKEVHAQVVTAGFVSDFRIGTALVSMYVKGGSM 209
Query: 207 VEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVE 266
+AR +FD + R++ ++NVM+ G+AK+G E A ELF R+ QV
Sbjct: 210 DDARQVFDGLHIRDVSTFNVMVGGYAKSGDWEKAFELFYRMQ---------------QV- 253
Query: 267 RLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQA 326
G+ PN + + ++ C A G +H+ + AG +
Sbjct: 254 ---------------GLKPNKISFLSILDGCWTPEALAWGKAVHAQCMNAGLVDDIRVAT 298
Query: 327 TIIHFYAACGRINLARLQFE-LGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVY 385
++I Y CG I AR F+ + ++D + SW +I G+ NG IEDA LF MQ
Sbjct: 299 SLIRMYTTCGSIEGARRVFDNMKVRD-VVSWTVMIEGYAENGNIEDAFGLFATMQ----- 352
Query: 386 SWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYV 445
+ G++P+ IT + + A A S L R H V
Sbjct: 353 --------------------------EEGIQPDRITYMHIMNACAISANLNHAREIHSQV 386
Query: 446 LNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANL 505
+ +S A++ MYAKCG+I A +VF + R V W+A+I +G
Sbjct: 387 DIAGFGTDLLVSTALVHMYAKCGAIKDARQVFDAMPRR--DVVSWSAMIGAYVENGYGTE 444
Query: 506 TLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLG-ERYFKSMKSVYNVEPDLKHYGCM 564
+ + +++ NI+ + +T+I +L+ C H G +D+G E Y +++K+ ++ + +
Sbjct: 445 AFETFHLMKRSNIEPDGVTYINLLNACGHLGALDVGMEIYTQAIKA--DLVSHVPLGNAL 502
Query: 565 VDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGN 605
+ + + G +E A + +M ++ DV+ W ++ +HGN
Sbjct: 503 IIMNAKHGSVERARYIFDTM-VRRDVITWNAMIGGYSLHGN 542
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 106/416 (25%), Positives = 207/416 (49%), Gaps = 42/416 (10%)
Query: 191 IISTNLLNMYCVCSSLVEA---RSLFDEM----KERNIVSWNVMLNGFAKAGLVELAREL 243
I S + ++ C+ L +A + + D + ++ NI N ++ ++ G V AR++
Sbjct: 55 IDSRTYVKLFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNTLIKLYSICGNVTEARQI 114
Query: 244 FERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAF 303
F+ + +K VV+W +I GY QV + EA ++R M+ +G+ P+ + + ++ AC
Sbjct: 115 FDSVENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIITFLSVLDACSSPAGL 174
Query: 304 GEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGF 363
G ++H+ +V AGF F +G AL++ +
Sbjct: 175 NWGKEVHAQVVTAGFVS-----------------------DFRIG--------TALVSMY 203
Query: 364 IRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMV 423
++ G ++DARQ+F+ + RDV +++ M+ GYA++ A ELF+ M G+KPN+I+ +
Sbjct: 204 VKGGSMDDARQVFDGLHIRDVSTFNVMVGGYAKSGDWEKAFELFYRMQQVGLKPNKISFL 263
Query: 424 SVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDR 483
S+ + L G+ H +N + + ++ ++I MY CGSI A VF +++ R
Sbjct: 264 SILDGCWTPEALAWGKAVHAQCMNAGLVDDIRVATSLIRMYTTCGSIEGARRVFDNMKVR 323
Query: 484 TTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGER 543
V W +I G A +G+ +++ +++ I+ + IT++ +++ C + ++ R
Sbjct: 324 --DVVSWTVMIEGYAENGNIEDAFGLFATMQEEGIQPDRITYMHIMNACAISANLNHA-R 380
Query: 544 YFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAA 599
S + DL +V + + G ++DA +V +MP + DVV W ++ A
Sbjct: 381 EIHSQVDIAGFGTDLLVSTALVHMYAKCGAIKDARQVFDAMPRR-DVVSWSAMIGA 435
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 116/504 (23%), Positives = 216/504 (42%), Gaps = 103/504 (20%)
Query: 6 FHSVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLI 65
F + Q+ L+ + +++ +S L C A++ G+ +H+ +GL + + SLI
Sbjct: 244 FELFYRMQQVGLKPN--KISFLSILDGCWTPEALAWGKAVHAQCMNAGLVDDIRVATSLI 301
Query: 66 NLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTS 125
+Y CG I A+ +FD+ D V+ +MI GY N + D
Sbjct: 302 RMYTTCGSIEGARRVFDNMKVRDVVSWTVMIEGYAENGNIED------------------ 343
Query: 126 MIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLM 185
A +F M+ G+ P+ +T ++++ + R +H ++
Sbjct: 344 -------------AFGLFATMQEEGIQPDRITYMHIMNACAISANLNHAREIHS---QVD 387
Query: 186 IDGF---VIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARE 242
I GF +++ST L++MY C ++ +AR +FD M R++VSW+ M+ + + G
Sbjct: 388 IAGFGTDLLVSTALVHMYAKCGAIKDARQVFDAMPRRDVVSWSAMIGAYVENG------- 440
Query: 243 LFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMA 302
+GT EA + M I P+ V ++L++ACG A
Sbjct: 441 ------------YGT------------EAFETFHLMKRSNIEPDGVTYINLLNACGHLGA 476
Query: 303 FGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAG 362
G++I++ +KA + + +I A G + AR F+ ++ + +WNA+I G
Sbjct: 477 LDVGMEIYTQAIKADLVSHVPLGNALIIMNAKHGSVERARYIFDTMVRRDVITWNAMIGG 536
Query: 363 FIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITM 422
+ +G +A LF+ M K E F +PN +T
Sbjct: 537 YSLHGNAREALYLFDRMLK-----------------------ERF--------RPNSVTF 565
Query: 423 VSVFCAIASSGTLKEGRWAHEYVLN-NSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIR 481
V V A + +G + EGR Y+L I L ++D+ + G ++ A + +
Sbjct: 566 VGVLSACSRAGFVDEGRRFFTYLLEGRGIVPTVKLYGCMVDLLGRAGELDEAELLIKSMP 625
Query: 482 DRTTSVSPWNAIICGLAMHGDANL 505
+ TS S W++++ +HG+ ++
Sbjct: 626 VKPTS-SIWSSLLVACRIHGNLDV 648
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 87/308 (28%), Positives = 151/308 (49%), Gaps = 21/308 (6%)
Query: 327 TIIHFYAACGRINLARLQFELGIKDHIAS---------WNALIAGFIRNGMIEDARQLFN 377
T + + C + A L + ++DHI N LI + G + +ARQ+F+
Sbjct: 59 TYVKLFQRCTELRDAALGKQ--VRDHIIQGGRQLNIYELNTLIKLYSICGNVTEARQIFD 116
Query: 378 NMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKE 437
+++ + V +W+A+I+GYAQ A LF MVD G++P+ IT +SV A +S L
Sbjct: 117 SVENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIITFLSVLDACSSPAGLNW 176
Query: 438 GRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVF--YHIRDRTTSVSPWNAIIC 495
G+ H V+ + + A++ MY K GS++ A +VF HIRD VS +N ++
Sbjct: 177 GKEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGLHIRD----VSTFNVMVG 232
Query: 496 GLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVE 555
G A GD +++ +++ +K N I+F+ +L C + G+ + V+
Sbjct: 233 GYAKSGDWEKAFELFYRMQQVGLKPNKISFLSILDGCWTPEALAWGKAVHAQCMNAGLVD 292
Query: 556 PDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVE--VGERAA 613
D++ ++ + G +E A V +M ++ DVV W ++ +GN+E G A
Sbjct: 293 -DIRVATSLIRMYTTCGSIEGARRVFDNMKVR-DVVSWTVMIEGYAENGNIEDAFGLFAT 350
Query: 614 KSLAGLQP 621
G+QP
Sbjct: 351 MQEEGIQP 358
>gi|255559863|ref|XP_002520950.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539787|gb|EEF41367.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 835
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 187/649 (28%), Positives = 317/649 (48%), Gaps = 98/649 (15%)
Query: 14 KANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGL 73
KA + + Y A +AL+ C + G QIH+ I KSG + ++ N+L+ +Y
Sbjct: 153 KAGVVTNTYTFA--AALQACEDSSFIKLGMQIHAAILKSGRVLDVYVANALVAMY----- 205
Query: 74 ISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQN 133
+R ++ +A +F K V++ SM+ GF QN
Sbjct: 206 --------------------------VRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFIQN 239
Query: 134 DCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIIS 193
+ EALE F D++ + P++V++ S+I +S LG + + +H IK D +++
Sbjct: 240 GLYSEALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDSNILVG 299
Query: 194 TNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVV 253
L++MY AK + F+ + KD++
Sbjct: 300 NTLIDMY-------------------------------AKCCCMSYGGRAFDLMAHKDLI 328
Query: 254 SWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSII 313
SW T GY Q + +AL + R + +G+ + MI ++ AC G+ +IH
Sbjct: 329 SWTTAAAGYAQNKCYLQALELLRQLQMEGMDVDATMIGSILLACRGLNCLGKIKEIHGYT 388
Query: 314 VKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDAR 373
++ G +Q TII Y CG +I+ A
Sbjct: 389 IRGGLS-DPVLQNTIIDVYGECG-------------------------------IIDYAV 416
Query: 374 QLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSG 433
++F +++ +DV SW++MIS Y N N ALE+F M + G++P+ +T+VS+ A+ S
Sbjct: 417 RIFESIECKDVVSWTSMISCYVHNGLANKALEVFSSMKETGLEPDYVTLVSILSAVCSLS 476
Query: 434 TLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAI 493
TLK+G+ H +++ L ++S ++DMYA+CGS+ A+++F ++R + W A+
Sbjct: 477 TLKKGKEIHGFIIRKGFILEGSISNTLVDMYARCGSVEDAYKIFTCTKNRNLIL--WTAM 534
Query: 494 ICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYN 553
I MHG ++++ ++ I + ITF+ +L C H+GLV+ G+ + + MK Y
Sbjct: 535 ISAYGMHGYGEAAVELFMRMKDEKIIPDHITFLALLYACSHSGLVNEGKSFLEIMKCEYQ 594
Query: 554 VEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAA 613
+EP +HY C+VDLLGR LE+A ++++SM + +W LL A RIH N E+GE AA
Sbjct: 595 LEPWPEHYTCLVDLLGRRNCLEEAYQIVKSMQNEPTPEVWCALLGACRIHSNKEIGEVAA 654
Query: 614 KSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
+ L L + + VL+SN++A GRW+D +R M+ G+ + PG S
Sbjct: 655 EKLLELDLDNPGNYVLVSNVFAANGRWKDVEEVRMRMKGSGLTKNPGCS 703
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 139/559 (24%), Positives = 254/559 (45%), Gaps = 94/559 (16%)
Query: 107 DAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSV 166
DA +FDK + ++ +M+ G+ N ALE++R+MR LGV + T ++ +
Sbjct: 10 DAEMIFDKMSERSIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSYTFPVLLKACG 69
Query: 167 HLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERN-IVSWN 225
+ ++ +HGL IK D FV + +L+ +Y C+ + AR LFD M RN +VSWN
Sbjct: 70 IVEDLFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFDRMYVRNDVVSWN 129
Query: 226 VMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAP 285
+++ ++ G+ +EAL ++ ML G+
Sbjct: 130 SIISAYSGNGMC-------------------------------TEALCLFSEMLKAGVVT 158
Query: 286 NDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQF 345
N + AC + G+QIH+ I+K+G ++ Y A
Sbjct: 159 NTYTFAAALQACEDSSFIKLGMQIHAAILKSG---------RVLDVYVA----------- 198
Query: 346 ELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALE 405
NAL+A ++R G + +A +F N++ +D+ +W++M++G+ QN + ALE
Sbjct: 199 -----------NALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFIQNGLYSEALE 247
Query: 406 LFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYA 465
F+ + +A +KP++++++S+ A G L G+ H Y + N N + +IDMYA
Sbjct: 248 FFYDLQNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDSNILVGNTLIDMYA 307
Query: 466 KCGSIN---TAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNS 522
KC ++ AF++ H + W G A + L++ L+ + +++
Sbjct: 308 KCCCMSYGGRAFDLMAH-----KDLISWTTAAAGYAQNKCYLQALELLRQLQMEGMDVDA 362
Query: 523 ITFIGVLSTCCHAGLVDLGERYFKSMKSVYNV-------EPDLKHYGCMVDLLGRAGQLE 575
T IG + C GL LG+ +K ++ +P L++ ++D+ G G ++
Sbjct: 363 -TMIGSILLACR-GLNCLGK-----IKEIHGYTIRGGLSDPVLQN--TIIDVYGECGIID 413
Query: 576 DAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSL--AGLQPSHGPSRVLLSNI 633
A + S+ K DVV W ++++ +G S+ GL+P + +LS +
Sbjct: 414 YAVRIFESIECK-DVVSWTSMISCYVHNGLANKALEVFSSMKETGLEPDYVTLVSILSAV 472
Query: 634 YA----DAGRWEDAFSIRK 648
+ G+ F IRK
Sbjct: 473 CSLSTLKKGKEIHGFIIRK 491
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 143/572 (25%), Positives = 244/572 (42%), Gaps = 109/572 (19%)
Query: 42 GQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIR 101
G +IH L K G +S F+ NSL+ LYAKC I+ A+ +FD Y+R
Sbjct: 77 GAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFDRM--------------YVR 122
Query: 102 NDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASV 161
ND VS+ S+I ++ N EAL +F +M GV+ N T A+
Sbjct: 123 ND----------------VVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAA 166
Query: 162 I-----SSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEM 216
+ SS + LG +H ++K V ++ L+ MY + EA +F +
Sbjct: 167 LQACEDSSFIKLG-----MQIHAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNL 221
Query: 217 KERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYR 276
+ ++IV+WN ML GF + GL A E F + + D
Sbjct: 222 EGKDIVTWNSMLTGFIQNGLYSEALEFFYDLQNAD------------------------- 256
Query: 277 AMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACG 336
+ P+ V I+ +I A GR G +IH+ +K GFD + T+I YA C
Sbjct: 257 ------LKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDSNILVGNTLIDMYAKCC 310
Query: 337 RINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQ 396
++ F+L + SW AG YAQ
Sbjct: 311 CMSYGGRAFDLMAHKDLISWTTAAAG-------------------------------YAQ 339
Query: 397 NEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNL 456
N+ ALEL + G+ + + S+ A L + + H Y + ++ + L
Sbjct: 340 NKCYLQALELLRQLQMEGMDVDATMIGSILLACRGLNCLGKIKEIHGYTIRGGLS-DPVL 398
Query: 457 SAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKR 516
IID+Y +CG I+ A +F I + V W ++I +G AN L+++S +++
Sbjct: 399 QNTIIDVYGECGIIDYAVRIFESIECK--DVVSWTSMISCYVHNGLANKALEVFSSMKET 456
Query: 517 NIKLNSITFIGVLSTCCHAGLVDLG-ERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLE 575
++ + +T + +LS C + G E + ++ + +E + + +VD+ R G +E
Sbjct: 457 GLEPDYVTLVSILSAVCSLSTLKKGKEIHGFIIRKGFILEGSISN--TLVDMYARCGSVE 514
Query: 576 DAEEVIRSMPMKADVVIWGTLLAASRIHGNVE 607
DA ++ + ++++W +++A +HG E
Sbjct: 515 DAYKIFTCTKNR-NLILWTAMISAYGMHGYGE 545
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 139/300 (46%), Gaps = 34/300 (11%)
Query: 231 FAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMI 290
+ K G V A +F+++ + + +W M+ GY+ AL MYR M G++ +
Sbjct: 2 YGKCGSVLDAEMIFDKMSERSIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSYTF 61
Query: 291 VDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFE-LGI 349
L+ ACG G +IH + +K G D + F+ +++ YA C IN AR F+ + +
Sbjct: 62 PVLLKACGIVEDLFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFDRMYV 121
Query: 350 KDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHG 409
++ + SWN++I+ + NGM +A LF+ M K
Sbjct: 122 RNDVVSWNSIISAYSGNGMCTEALCLFSEMLK---------------------------- 153
Query: 410 MVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGS 469
AGV N T + A S +K G H +L + L+ ++ A++ MY + G
Sbjct: 154 ---AGVVTNTYTFAAALQACEDSSFIKLGMQIHAAILKSGRVLDVYVANALVAMYVRFGK 210
Query: 470 INTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVL 529
+ A +F ++ + + WN+++ G +G + L+ + DL+ ++K + ++ I ++
Sbjct: 211 MPEAAVIFGNLEGK--DIVTWNSMLTGFIQNGLYSEALEFFYDLQNADLKPDQVSIISII 268
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 70/150 (46%), Gaps = 19/150 (12%)
Query: 463 MYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNS 522
MY KCGS+ A +F + +R S+ WNA++ G +G+A L++Y ++ + +S
Sbjct: 1 MYGKCGSVLDAEMIFDKMSER--SIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDS 58
Query: 523 ITFIGVLSTC-------CHAGLVDLGERY-FKSMKSVYNVEPDLKHYGCMVDLLGRAGQL 574
TF +L C C A + L +Y S V N +V L + +
Sbjct: 59 YTFPVLLKACGIVEDLFCGAEIHGLAIKYGCDSFVFVVN---------SLVALYAKCNDI 109
Query: 575 EDAEEVIRSMPMKADVVIWGTLLAASRIHG 604
A ++ M ++ DVV W ++++A +G
Sbjct: 110 NGARKLFDRMYVRNDVVSWNSIISAYSGNG 139
>gi|357127896|ref|XP_003565613.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g56310-like [Brachypodium distachyon]
Length = 500
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 147/360 (40%), Positives = 225/360 (62%), Gaps = 3/360 (0%)
Query: 306 GLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIR 365
G Q+HS+IV+AG + A++I Y +CGR+ AR F+ I WN +I+G+++
Sbjct: 88 GPQLHSVIVRAGLASDAHVSASLIQTYFSCGRVASARSVFDQTTDKDIFCWNVMISGYVK 147
Query: 366 NGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGM-VDAGVKPNEITMVS 424
+G + AR+LF+ M R+V SW+ +I YAQ +QP A+E+F M V+ G++P+ + ++S
Sbjct: 148 SGNLACARELFDVMPARNVVSWTTVIGAYAQMKQPVEAVEVFRRMQVEEGIEPDGVALLS 207
Query: 425 VFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRT 484
V A G + G W H +V+ + L AIIDMY K G + A EVF + +
Sbjct: 208 VLSACGDLGAVDLGEWVHRFVVRRGLCWQIPLMNAIIDMYVKLGCVRKAVEVFEGMDQK- 266
Query: 485 TSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERY 544
SV W +I G A+HG ++++ +E N+ N +TF+ +LS C H GL DLG Y
Sbjct: 267 -SVVTWTTVIAGFALHGLGLEAIEMFRRMEMENVAPNDVTFLAILSACSHVGLTDLGRWY 325
Query: 545 FKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHG 604
FK M S Y ++ ++HYGCMVDLLGRAG L +A+++++ MP KA+ IWG LLAA+R HG
Sbjct: 326 FKIMVSQYRIKQRVEHYGCMVDLLGRAGYLMEAQDLVQDMPFKANAAIWGALLAAARTHG 385
Query: 605 NVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
+ E+G++A L L+P + + +LLSNIYA+ RW+D +RK+M+D G++ +PG S +
Sbjct: 386 DAELGKQALLHLIELEPHNSGNYILLSNIYAEQERWDDVSKLRKQMKDRGLRNVPGASSI 445
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 108/391 (27%), Positives = 191/391 (48%), Gaps = 45/391 (11%)
Query: 36 HIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIM 95
H+ + G Q+HS+I ++GL S+ + SLI Y CG ++ A+S+FD + D N+M
Sbjct: 82 HLRGTLGPQLHSVIVRAGLASDAHVSASLIQTYFSCGRVASARSVFDQTTDKDIFCWNVM 141
Query: 96 ISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRI-LGVIPN 154
ISGY+++ L ARE+FD P + VS+T++I +AQ EA+EVFR M++ G+ P+
Sbjct: 142 ISGYVKSGNLACARELFDVMPARNVVSWTTVIGAYAQMKQPVEAVEVFRRMQVEEGIEPD 201
Query: 155 EVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFD 214
V L SV+S+ LG + +H V++ + + + +++MY + +A +F+
Sbjct: 202 GVALLSVLSACGDLGAVDLGEWVHRFVVRRGLCWQIPLMNAIIDMYVKLGCVRKAVEVFE 261
Query: 215 EMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTM 274
M ++++V+W ++ GFA GL G EA+ M
Sbjct: 262 GMDQKSVVTWTTVIAGFALHGL------------------------GL-------EAIEM 290
Query: 275 YRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIV-----KAGFDCYDFIQATII 329
+R M + +APNDV + ++SAC G I+V K + Y ++
Sbjct: 291 FRRMEMENVAPNDVTFLAILSACSHVGLTDLGRWYFKIMVSQYRIKQRVEHY----GCMV 346
Query: 330 HFYAACGRINLAR-LQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWS 388
G + A+ L ++ K + A W AL+A +G E +Q ++ + + ++
Sbjct: 347 DLLGRAGYLMEAQDLVQDMPFKANAAIWGALLAAARTHGDAELGKQALLHLIELEPHNSG 406
Query: 389 AMI---SGYAQNEQPNMALELFHGMVDAGVK 416
I + YA+ E+ + +L M D G++
Sbjct: 407 NYILLSNIYAEQERWDDVSKLRKQMKDRGLR 437
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 100/224 (44%), Gaps = 39/224 (17%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+AL+S L C AV G+ +H + + GL + N++I++Y K G + +A
Sbjct: 203 VALLSVLSACGDLGAVDLGEWVHRFVVRRGLCWQIPLMNAIIDMYVKLGCVRKAV----- 257
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
EVF+ K V++T++I GFA + EA+E+F
Sbjct: 258 --------------------------EVFEGMDQKSVVTWTTVIAGFALHGLGLEAIEMF 291
Query: 144 RDMRILGVIPNEVTLASVISSSVHLG----GIWECRMLHGLVIKLMIDGFVIISTNLLNM 199
R M + V PN+VT +++S+ H+G G W ++ +V + I V ++++
Sbjct: 292 RRMEMENVAPNDVTFLAILSACSHVGLTDLGRWYFKI---MVSQYRIKQRVEHYGCMVDL 348
Query: 200 YCVCSSLVEARSLFDEMK-ERNIVSWNVMLNGFAKAGLVELARE 242
L+EA+ L +M + N W +L G EL ++
Sbjct: 349 LGRAGYLMEAQDLVQDMPFKANAAIWGALLAAARTHGDAELGKQ 392
>gi|224071603|ref|XP_002303536.1| predicted protein [Populus trichocarpa]
gi|222840968|gb|EEE78515.1| predicted protein [Populus trichocarpa]
Length = 596
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 178/553 (32%), Positives = 298/553 (53%), Gaps = 52/553 (9%)
Query: 116 PIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVIS----SSVHLGGI 171
P S+ I F+Q ++EAL ++ M+ G+ P+ ++S + ++ +GG+
Sbjct: 85 PHPDSFSWGWAIRYFSQQGQFKEALYLYVQMQRQGLCPSTFAVSSALRAYARTTYKMGGM 144
Query: 172 WECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGF 231
+H K V + T L+++Y + A+ +FDE+ E+N+VSWN +L+G
Sbjct: 145 ----SIHAESYKYGFSNCVYVQTALVDLYSKLGDMNTAQKVFDELAEKNVVSWNSILSGH 200
Query: 232 AKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIV 291
K+G + A+ +F++I KDV+SW +MI GY ++ + A +++ M
Sbjct: 201 LKSGNLLEAQRVFDQISKKDVISWNSMISGYAKIGDMDRACVLFQQM------------- 247
Query: 292 DLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKD 351
+ + ++ +I Y CG I A F+ +
Sbjct: 248 ----------------------PEKNYSSWN----ALISGYVNCGDIKSAWRFFDAMPER 281
Query: 352 HIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMV 411
+ SW +IAG+ + G ++ A +LF+ + K+D+ +++AMIS +AQN QP AL LF M+
Sbjct: 282 NSVSWITMIAGYSKCGDVDSASKLFDQIAKKDLLTFNAMISCFAQNSQPRKALWLFSEML 341
Query: 412 D--AGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGS 469
A ++P+++T+ SV A + G L+ W YV + ++D L A++D+YAKCGS
Sbjct: 342 KAYANIQPDQMTLASVVSACSQLGDLRFASWIESYVNDLGTEIDDQLVTALLDLYAKCGS 401
Query: 470 INTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVL 529
++ A+E+F+ + + V ++A+I G ++G +K++ + I N TF G+L
Sbjct: 402 VDKAYELFHGLNKK--DVVAYSAMISGCGINGKVADAIKLFDMMVDAQIHPNLATFTGLL 459
Query: 530 STCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKAD 589
+ C HAGLV G R+F SMK + + P HY MVDLLGRAG+L+DA E+I+SMPM+
Sbjct: 460 TACNHAGLVKEGYRFFSSMKD-HGLVPSTDHYAIMVDLLGRAGRLQDAYELIKSMPMQPH 518
Query: 590 VVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKE 649
+WG LL A +H NVE+GE AA+ L+ + LL+NIY+ AGRW+D +RK
Sbjct: 519 SGVWGALLLACNVHNNVELGEIAAQHCFNLETNATAYYSLLANIYSSAGRWDDVGRLRKL 578
Query: 650 MRDCGMKRLPGFS 662
++ + +L G S
Sbjct: 579 WKEKKLAKLSGCS 591
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 97/375 (25%), Positives = 184/375 (49%), Gaps = 22/375 (5%)
Query: 238 ELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISAC 297
+ + +P D SWG I + Q + EAL +Y M G+ P+ + + A
Sbjct: 75 QYVHSILYHLPHPDSFSWGWAIRYFSQQGQFKEALYLYVQMQRQGLCPSTFAVSSALRAY 134
Query: 298 GRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWN 357
R G+ IH+ K GF ++Q ++ Y+ G +N A+ F+ + ++ SWN
Sbjct: 135 ARTTYKMGGMSIHAESYKYGFSNCVYVQTALVDLYSKLGDMNTAQKVFDELAEKNVVSWN 194
Query: 358 ALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKP 417
++++G +++G + +A+++F+ + K+DV SW++MISGYA+ + A LF M +
Sbjct: 195 SILSGHLKSGNLLEAQRVFDQISKKDVISWNSMISGYAKIGDMDRACVLFQQMPE----K 250
Query: 418 NEITMVSVFCAIASSGTLKEG-RWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEV 476
N + ++ + G +K R+ NS++ +I Y+KCG +++A ++
Sbjct: 251 NYSSWNALISGYVNCGDIKSAWRFFDAMPERNSVSW-----ITMIAGYSKCGDVDSASKL 305
Query: 477 FYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEK--RNIKLNSITFIGVLSTCCH 534
F I + + +NA+I A + L ++S++ K NI+ + +T V+S C
Sbjct: 306 FDQIAKK--DLLTFNAMISCFAQNSQPRKALWLFSEMLKAYANIQPDQMTLASVVSACSQ 363
Query: 535 AGLVDLGERYFKSMKSVYN---VEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVV 591
G DL R+ ++S N E D + ++DL + G ++ A E+ + K DVV
Sbjct: 364 LG--DL--RFASWIESYVNDLGTEIDDQLVTALLDLYAKCGSVDKAYELFHGLN-KKDVV 418
Query: 592 IWGTLLAASRIHGNV 606
+ +++ I+G V
Sbjct: 419 AYSAMISGCGINGKV 433
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 117/514 (22%), Positives = 215/514 (41%), Gaps = 108/514 (21%)
Query: 29 ALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNS------------------------- 63
A+RY S + ++ + + GL +TF +S
Sbjct: 95 AIRYFSQQGQFKEALYLYVQMQRQGLCPSTFAVSSALRAYARTTYKMGGMSIHAESYKYG 154
Query: 64 ----------LINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFD 113
L++LY+K G ++ A+ +FD + + V+ N ++SG++++ L +A+ VFD
Sbjct: 155 FSNCVYVQTALVDLYSKLGDMNTAQKVFDELAEKNVVSWNSILSGHLKSGNLLEAQRVFD 214
Query: 114 KTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWE 173
+ K +S+ SMI G+A+ A +F+ M E +S W
Sbjct: 215 QISKKDVISWNSMISGYAKIGDMDRACVLFQQMP-------EKNYSS-----------WN 256
Query: 174 CRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAK 233
L++ Y C + A FD M ERN VSW M+ G++K
Sbjct: 257 A---------------------LISGYVNCGDIKSAWRFFDAMPERNSVSWITMIAGYSK 295
Query: 234 AGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAML--CDGIAPNDVMIV 291
G V+ A +LF++I KD++++ MI + Q + +AL ++ ML I P+ + +
Sbjct: 296 CGDVDSASKLFDQIAKKDLLTFNAMISCFAQNSQPRKALWLFSEMLKAYANIQPDQMTLA 355
Query: 292 DLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKD 351
++SAC + I S + G + D + ++ YA CG ++ A F K
Sbjct: 356 SVVSACSQLGDLRFASWIESYVNDLGTEIDDQLVTALLDLYAKCGSVDKAYELFHGLNKK 415
Query: 352 HIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMV 411
+ +++A+I+G NG + D A++LF MV
Sbjct: 416 DVVAYSAMISGCGINGKVAD-------------------------------AIKLFDMMV 444
Query: 412 DAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSIN 471
DA + PN T + A +G +KEG + ++ + + + A ++D+ + G +
Sbjct: 445 DAQIHPNLATFTGLLTACNHAGLVKEGYRFFSSMKDHGLVPSTDHYAIMVDLLGRAGRLQ 504
Query: 472 TAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANL 505
A+E+ + + S W A++ +H + L
Sbjct: 505 DAYELIKSMPMQPHS-GVWGALLLACNVHNNVEL 537
>gi|345505228|gb|AEN99838.1| chlororespiratory reduction 4, partial [Matthiola incana]
Length = 584
Score = 305 bits (781), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 188/546 (34%), Positives = 295/546 (54%), Gaps = 45/546 (8%)
Query: 123 YTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVI 182
+ ++I F+ R AL +F M V ++ +++ V+ + LG + +HG +
Sbjct: 61 WNAVIKSFSHGVDPRNALLLFCLMIENSVSVDKFSISLVLKACSRLGFVDFGMQVHGFLR 120
Query: 183 KLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARE 242
K I + + L+ +Y C L AR +FD M +R+ VS+N M++G+ K GL+E ARE
Sbjct: 121 KTGIYSDLFLQNCLIGLYLKCGCLGFARQVFDRMPQRDSVSYNSMIDGYVKCGLIESARE 180
Query: 243 LFERIP--SKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRA 300
LF+ +P K+++SW MI GY Q SE + L D + D LIS
Sbjct: 181 LFDLMPREKKNLISWNCMISGYTQ----SEDGVNVASKLFDEMPEKD-----LIS----- 226
Query: 301 MAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALI 360
++I Y RI A+ F+L + + +W +I
Sbjct: 227 ------------------------WNSLIDGYVKHRRIEDAKSLFDLMPRKDVVTWATMI 262
Query: 361 AGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGM-VDAGVKPNE 419
G+ + G + A++LF+ M +RDV ++++M++GY QN+ A+ +F+ M ++ + P+E
Sbjct: 263 DGYAKLGFVHQAKKLFDEMPQRDVVAYNSMMAGYVQNKYHAEAIGIFNDMEKESHLSPDE 322
Query: 420 ITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYH 479
T+V V AIA G L + H Y+++N L L A+ID Y+KCGSI + VF
Sbjct: 323 TTLVIVLSAIAQLGRLSKAVDIHLYIMDNKFRLGGKLGVALIDTYSKCGSIQKSMRVFEE 382
Query: 480 IRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVD 539
I ++ S+ WNA+I GLA+HG + +EKR+IK + ITFIGVL+ C H+GLV
Sbjct: 383 IENK--SIDHWNAMIGGLAIHGLGESAFDMLLQIEKRSIKPDDITFIGVLNACSHSGLVK 440
Query: 540 LGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAA 599
G F+ M+ + +EP L+HYGCMVD+L R+G +E A+ +I MP++ + VIW T L A
Sbjct: 441 EGLLCFELMRRKHKIEPKLQHYGCMVDILSRSGSIELAKNLIEEMPIEPNDVIWRTFLTA 500
Query: 600 SRIHGNVEVGERAAKSLAGLQPSHGPSR-VLLSNIYADAGRWEDAFSIRKEMRDCGMKRL 658
H E GE AK L LQ + PS VLLSN+YA G W++ +R M++ ++++
Sbjct: 501 CSNHKEFETGELVAKHLF-LQGGYNPSSFVLLSNMYASFGMWKEVRRVRTTMKERKLRKI 559
Query: 659 PGFSGV 664
PG S +
Sbjct: 560 PGCSWI 565
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 124/456 (27%), Positives = 215/456 (47%), Gaps = 75/456 (16%)
Query: 22 YELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMF 81
+ ++LV L+ CS V G Q+H + K+G+ S+ F+QN LI LY KCG + A+ +F
Sbjct: 94 FSISLV--LKACSRLGFVDFGMQVHGFLRKTGIYSDLFLQNCLIGLYLKCGCLGFARQVF 151
Query: 82 DSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTP--IKCCVSYTSMIMGFAQNDCWREA 139
D D V+ N MI GY++ + ARE+FD P K +S+ MI G+ Q++
Sbjct: 152 DRMPQRDSVSYNSMIDGYVKCGLIESARELFDLMPREKKNLISWNCMISGYTQSE----- 206
Query: 140 LEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNM 199
+ + + +E+ +IS W +IDG+V
Sbjct: 207 ----DGVNVASKLFDEMPEKDLIS--------WNS----------LIDGYV--------- 235
Query: 200 YCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMI 259
+ +A+SLFD M +++V+W M++G+AK G V A++LF+ +P +DVV++ +M+
Sbjct: 236 --KHRRIEDAKSLFDLMPRKDVVTWATMIDGYAKLGFVHQAKKLFDEMPQRDVVAYNSMM 293
Query: 260 DGYLQVERLSEALTMYRAMLCDG-IAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGF 318
GY+Q + +EA+ ++ M + ++P++ +V ++SA + + + IH I+ F
Sbjct: 294 AGYVQNKYHAEAIGIFNDMEKESHLSPDETTLVIVLSAIAQLGRLSKAVDIHLYIMDNKF 353
Query: 319 DCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNN 378
+ +I Y+ CG I + FE I WNA+I G +G+ E A +
Sbjct: 354 RLGGKLGVALIDTYSKCGSIQKSMRVFEEIENKSIDHWNAMIGGLAIHGLGESAFDMLLQ 413
Query: 379 MQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG 438
++KR +KP++IT + V A + SG +KEG
Sbjct: 414 IEKR-------------------------------SIKPDDITFIGVLNACSHSGLVKEG 442
Query: 439 RWAHEYV-LNNSITLNDNLSAAIIDMYAKCGSINTA 473
E + + I ++D+ ++ GSI A
Sbjct: 443 LLCFELMRRKHKIEPKLQHYGCMVDILSRSGSIELA 478
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 101/404 (25%), Positives = 189/404 (46%), Gaps = 37/404 (9%)
Query: 233 KAGLVELARELFERIP------SKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPN 286
++ L E AR +F +D W +I + AL ++ M+ + ++ +
Sbjct: 33 RSYLAEFARCIFHEYHVSSYSVEEDPFLWNAVIKSFSHGVDPRNALLLFCLMIENSVSVD 92
Query: 287 DVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFE 346
I ++ AC R G+Q+H + K G F+Q +I Y CG + AR F+
Sbjct: 93 KFSISLVLKACSRLGFVDFGMQVHGFLRKTGIYSDLFLQNCLIGLYLKCGCLGFARQVFD 152
Query: 347 LGIKDHIASWNALIAGFIRNGMIEDARQLFNNM--QKRDVYSWSAMISGYAQNEQP-NMA 403
+ S+N++I G+++ G+IE AR+LF+ M +K+++ SW+ MISGY Q+E N+A
Sbjct: 153 RMPQRDSVSYNSMIDGYVKCGLIESARELFDLMPREKKNLISWNCMISGYTQSEDGVNVA 212
Query: 404 LELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLS-AAIID 462
+LF M + + I+ S+ G +K R L + + D ++ A +ID
Sbjct: 213 SKLFDEMPEKDL----ISWNSLI-----DGYVKHRRIEDAKSLFDLMPRKDVVTWATMID 263
Query: 463 MYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKR-NIKLN 521
YAK G ++ A ++F + R V +N+++ G + + I++D+EK ++ +
Sbjct: 264 GYAKLGFVHQAKKLFDEMPQR--DVVAYNSMMAGYVQNKYHAEAIGIFNDMEKESHLSPD 321
Query: 522 SITFIGVLSTCCHAGLVDLGERYFKSMK-SVYNVEPDLKHYG----CMVDLLGRAGQLED 576
T + VLS G R K++ +Y ++ + G ++D + G ++
Sbjct: 322 ETTLVIVLSAIAQLG------RLSKAVDIHLYIMDNKFRLGGKLGVALIDTYSKCGSIQK 375
Query: 577 AEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQ 620
+ V + K+ + W ++ IHG +GE A L ++
Sbjct: 376 SMRVFEEIENKS-IDHWNAMIGGLAIHG---LGESAFDMLLQIE 415
>gi|347954492|gb|AEP33746.1| chloroplast biogenesis 19, partial [Barbarea verna]
Length = 494
Score = 305 bits (781), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 160/420 (38%), Positives = 245/420 (58%), Gaps = 6/420 (1%)
Query: 249 SKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQ 308
S+ VSW + I + RL+EA + +M G+ PN + + L+S CG + E L
Sbjct: 27 SETTVSWTSRITLLSRNGRLAEAAKEFSSMRLAGVEPNHITFIALLSGCGDVSSGSEALG 86
Query: 309 --IHSIIVKAGFD-CYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIR 365
+H K G D + + I+ Y+ GR ARL F+ + +WN +I G++R
Sbjct: 87 DLLHGYACKLGLDRTHVMVGTAILGMYSKRGRFGKARLVFDFMEDKNSVTWNTMIDGYMR 146
Query: 366 NGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSV 425
+G + +A +LF+ M +RD+ SW+AMI+G+ + AL F M +GVKP+ + +++
Sbjct: 147 SGQVNNAVKLFDEMPERDLISWTAMINGFVKKGFHEEALAWFREMQISGVKPDYVAIIAA 206
Query: 426 FCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTT 485
A G L G W H YV+N N +S ++ID+Y +CG + A EVF + RT
Sbjct: 207 LAACTHLGALSFGLWVHRYVMNQDFKNNIRVSNSLIDLYCRCGCVEFAREVFDKMEKRT- 265
Query: 486 SVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYF 545
V WN++I G A +G+A+ +L + +++ K +++TF G L+ C H GLV+ G RYF
Sbjct: 266 -VVSWNSVIVGFAANGNAHESLVYFRKMQEEGFKPDAVTFTGALTACSHVGLVEEGLRYF 324
Query: 546 KSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGN 605
++MK + + P ++HYGC+VDL RAG+LEDA V++SMPMK + V+ G+LLAA R HGN
Sbjct: 325 QTMKRDHRISPRIEHYGCLVDLYSRAGRLEDALNVVQSMPMKPNEVVIGSLLAACRNHGN 384
Query: 606 VEV-GERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
V ER K L+ L + V+LSN+YA G WE A +R++M+ G+K+ PGFS V
Sbjct: 385 NTVLAERLVKHLSDLNVKSHSNYVILSNMYAADGIWEGASKMRRKMKGLGLKKQPGFSSV 444
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 103/369 (27%), Positives = 177/369 (47%), Gaps = 35/369 (9%)
Query: 112 FDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISS--SVHLG 169
+++ + VS+TS I ++N EA + F MR+ GV PN +T +++S V G
Sbjct: 22 LNQSTSETTVSWTSRITLLSRNGRLAEAAKEFSSMRLAGVEPNHITFIALLSGCGDVSSG 81
Query: 170 GIWECRMLHGLVIKLMID-GFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVML 228
+LHG KL +D V++ T +L MY +AR +FD M+++N V+WN M+
Sbjct: 82 SEALGDLLHGYACKLGLDRTHVMVGTAILGMYSKRGRFGKARLVFDFMEDKNSVTWNTMI 141
Query: 229 NGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDV 288
+G+ ++G V A +LF+ +P +D++SW MI+G+++ EAL +R M G+ P+ V
Sbjct: 142 DGYMRSGQVNNAVKLFDEMPERDLISWTAMINGFVKKGFHEEALAWFREMQISGVKPDYV 201
Query: 289 MIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELG 348
I+ ++AC A GL +H ++ F + ++I Y CG + AR F+
Sbjct: 202 AIIAALAACTHLGALSFGLWVHRYVMNQDFKNNIRVSNSLIDLYCRCGCVEFAREVFDKM 261
Query: 349 IKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFH 408
K + SWN++I GF NG ++ F MQ
Sbjct: 262 EKRTVVSWNSVIVGFAANGNAHESLVYFRKMQ---------------------------- 293
Query: 409 GMVDAGVKPNEITMVSVFCAIASSGTLKEG-RWAHEYVLNNSITLNDNLSAAIIDMYAKC 467
+ G KP+ +T A + G ++EG R+ ++ I+ ++D+Y++
Sbjct: 294 ---EEGFKPDAVTFTGALTACSHVGLVEEGLRYFQTMKRDHRISPRIEHYGCLVDLYSRA 350
Query: 468 GSINTAFEV 476
G + A V
Sbjct: 351 GRLEDALNV 359
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 154/301 (51%), Gaps = 52/301 (17%)
Query: 42 GQQIHSLIFKSGLE-SNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYI 100
G +H K GL+ ++ + +++ +Y+K G +A+ +FD + V N MI GY+
Sbjct: 86 GDLLHGYACKLGLDRTHVMVGTAILGMYSKRGRFGKARLVFDFMEDKNSVTWNTMIDGYM 145
Query: 101 RNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLAS 160
R+ ++N+A ++FD+ P + +S+T+MI GF + EAL FR+M+I GV P+ V + +
Sbjct: 146 RSGQVNNAVKLFDEMPERDLISWTAMINGFVKKGFHEEALAWFREMQISGVKPDYVAIIA 205
Query: 161 VISSSVHLG----GIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEM 216
+++ HLG G+W +H V+ + +S +L+++YC C + AR +FD+M
Sbjct: 206 ALAACTHLGALSFGLW----VHRYVMNQDFKNNIRVSNSLIDLYCRCGCVEFAREVFDKM 261
Query: 217 KERNIVSWNVMLNGFA-----------------------------------KAGLVELAR 241
++R +VSWN ++ GFA GLVE
Sbjct: 262 EKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEEGFKPDAVTFTGALTACSHVGLVEEGL 321
Query: 242 ELFERIPSKDVVS-----WGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISA 296
F+ + +S +G ++D Y + RL +AL + ++M + PN+V+I L++A
Sbjct: 322 RYFQTMKRDHRISPRIEHYGCLVDLYSRAGRLEDALNVVQSM---PMKPNEVVIGSLLAA 378
Query: 297 C 297
C
Sbjct: 379 C 379
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 122/274 (44%), Gaps = 23/274 (8%)
Query: 343 LQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDV----YSWSAMISGYAQNE 398
L+ + SW + I RNG + +A + F++M+ V ++ A++SG
Sbjct: 20 LKLNQSTSETTVSWTSRITLLSRNGRLAEAAKEFSSMRLAGVEPNHITFIALLSGCGDVS 79
Query: 399 QPNMAL-ELFHGMV-DAGVKPNEITMVSVFCAIASS-GTLKEGRWAHEYVLN-NSITLND 454
+ AL +L HG G+ + + + + S G + R +++ + NS+T N
Sbjct: 80 SGSEALGDLLHGYACKLGLDRTHVMVGTAILGMYSKRGRFGKARLVFDFMEDKNSVTWN- 138
Query: 455 NLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLE 514
+ID Y + G +N A ++F + +R + W A+I G G L + +++
Sbjct: 139 ----TMIDGYMRSGQVNNAVKLFDEMPER--DLISWTAMINGFVKKGFHEEALAWFREMQ 192
Query: 515 KRNIKLNSITFIGVLSTCCHAGLVDLG---ERYFKSMKSVYNVEPDLKHYGCMVDLLGRA 571
+K + + I L+ C H G + G RY + + + +++ ++DL R
Sbjct: 193 ISGVKPDYVAIIAALAACTHLGALSFGLWVHRYVMNQ----DFKNNIRVSNSLIDLYCRC 248
Query: 572 GQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGN 605
G +E A EV M K VV W +++ +GN
Sbjct: 249 GCVEFAREVFDKME-KRTVVSWNSVIVGFAANGN 281
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 71/153 (46%), Gaps = 32/153 (20%)
Query: 21 DYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSM 80
DY +A+++AL C+ A+S G +H + ++N + NSLI+LY +CG + A+ +
Sbjct: 199 DY-VAIIAALAACTHLGALSFGLWVHRYVMNQDFKNNIRVSNSLIDLYCRCGCVEFAREV 257
Query: 81 FDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREAL 140
F DK + VS+ S+I+GFA N E+L
Sbjct: 258 F-------------------------------DKMEKRTVVSWNSVIVGFAANGNAHESL 286
Query: 141 EVFRDMRILGVIPNEVTLASVISSSVHLGGIWE 173
FR M+ G P+ VT +++ H+G + E
Sbjct: 287 VYFRKMQEEGFKPDAVTFTGALTACSHVGLVEE 319
>gi|359479914|ref|XP_002268148.2| PREDICTED: uncharacterized protein LOC100250295 [Vitis vinifera]
Length = 1130
Score = 305 bits (781), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 157/423 (37%), Positives = 244/423 (57%), Gaps = 9/423 (2%)
Query: 248 PSKDVVSWGTMIDGYLQVE-----RLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMA 302
P+ + W T+I ++Q ++++ M G+ P+ L+ +
Sbjct: 20 PTLESFLWNTLIRAHVQARAQPTGPTHSPISIFVRMRFHGVQPDFHTFPFLLQSFASPSL 79
Query: 303 FGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAG 362
G +H+ I++ G F+Q ++I Y++CG + AR F+ + + SWN++I
Sbjct: 80 LHLGRSVHAQILRFGLAIDPFVQTSLISMYSSCGNLGFARQVFDEIPQPDLPSWNSIINA 139
Query: 363 FIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGV---KPNE 419
+ G+++ AR LF M +R+V SWS MI+GY + Q AL LF M GV +PNE
Sbjct: 140 NFQAGLVDMARNLFAVMPERNVISWSCMINGYVRCGQYKEALALFREMQMLGVNDVRPNE 199
Query: 420 ITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYH 479
TM V A G L+ G+WAH Y+ + ++ L A+IDMYAKCGS+ A VF +
Sbjct: 200 FTMSGVLAACGRLGALEHGKWAHAYIDKCGMPVDVVLGTALIDMYAKCGSVEKATWVFSN 259
Query: 480 IRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVD 539
+ V W+A+I GLAMHG A + ++S + + ++ N++TF+ V C H GLV
Sbjct: 260 L-GPNKDVMAWSAMISGLAMHGLAEECVGLFSKMINQGVRPNAVTFLAVFCACVHGGLVS 318
Query: 540 LGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAA 599
G+ Y + M Y++ P ++HYGCMVDL GRAG++++A V++SMPM+ DV++WG LL+
Sbjct: 319 EGKDYLRRMTEDYSIIPTIQHYGCMVDLYGRAGRIKEAWNVVKSMPMEPDVLVWGALLSG 378
Query: 600 SRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLP 659
SR+HG++E E A K L L+P++ + VLLSN+YA GRWED +R M G+K++P
Sbjct: 379 SRMHGDIETCELALKKLIELEPTNSGAYVLLSNVYAKRGRWEDVRHVRDLMETMGIKKVP 438
Query: 660 GFS 662
G S
Sbjct: 439 GCS 441
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 119/394 (30%), Positives = 191/394 (48%), Gaps = 54/394 (13%)
Query: 139 ALEVFRDMRILGVIPNEVTLASVISSS-----VHLGGIWECRMLHGLVIK--LMIDGFVI 191
+ +F MR GV P+ T ++ S +HLG R +H +++ L ID FV
Sbjct: 48 PISIFVRMRFHGVQPDFHTFPFLLQSFASPSLLHLG-----RSVHAQILRFGLAIDPFV- 101
Query: 192 ISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKD 251
T+L++MY C +L AR +FDE+ + ++ SWN ++N +AGLV++AR LF +P ++
Sbjct: 102 -QTSLISMYSSCGNLGFARQVFDEIPQPDLPSWNSIINANFQAGLVDMARNLFAVMPERN 160
Query: 252 VVSWGTMIDGYLQVERLSEALTMYRAMLCDG---IAPNDVMIVDLISACGRAMAFGEGLQ 308
V+SW MI+GY++ + EAL ++R M G + PN+ + +++ACGR A G
Sbjct: 161 VISWSCMINGYVRCGQYKEALALFREMQMLGVNDVRPNEFTMSGVLAACGRLGALEHGKW 220
Query: 309 IHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFE-LGIKDHIASWNALIAGFIRNG 367
H+ I K G + +I YA CG + A F LG + +W+A+I+G +G
Sbjct: 221 AHAYIDKCGMPVDVVLGTALIDMYAKCGSVEKATWVFSNLGPNKDVMAWSAMISGLAMHG 280
Query: 368 MIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFC 427
+ E+ LF+ M++ GV+PN +T ++VFC
Sbjct: 281 LAEECVGLFSK-------------------------------MINQGVRPNAVTFLAVFC 309
Query: 428 AIASSGTLKEGR-WAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTS 486
A G + EG+ + + SI ++D+Y + G I A+ V +
Sbjct: 310 ACVHGGLVSEGKDYLRRMTEDYSIIPTIQHYGCMVDLYGRAGRIKEAWNVVKSM-PMEPD 368
Query: 487 VSPWNAIICGLAMHGD---ANLTLKIYSDLEKRN 517
V W A++ G MHGD L LK +LE N
Sbjct: 369 VLVWGALLSGSRMHGDIETCELALKKLIELEPTN 402
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 88/357 (24%), Positives = 166/357 (46%), Gaps = 66/357 (18%)
Query: 42 GQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIR 101
G+ +H+ I + GL + F+Q SLI++Y+ CG + A+ +FD D + N +I+ +
Sbjct: 83 GRSVHAQILRFGLAIDPFVQTSLISMYSSCGNLGFARQVFDEIPQPDLPSWNSIINANFQ 142
Query: 102 NDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILG---VIPNEVTL 158
++ AR +F P + +S++ MI G+ + ++EAL +FR+M++LG V PNE T+
Sbjct: 143 AGLVDMARNLFAVMPERNVISWSCMINGYVRCGQYKEALALFREMQMLGVNDVRPNEFTM 202
Query: 159 ASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEM-K 217
+ V+++ LG + + H + K + V++ T L++MY C S+ +A +F +
Sbjct: 203 SGVLAACGRLGALEHGKWAHAYIDKCGMPVDVVLGTALIDMYAKCGSVEKATWVFSNLGP 262
Query: 218 ERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRA 277
+++++W+ M++G A GL E E + ++
Sbjct: 263 NKDVMAWSAMISGLAMHGLAE-------------------------------ECVGLFSK 291
Query: 278 MLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGR 337
M+ G+ PN V + + AC +H +V G D
Sbjct: 292 MINQGVRPNAVTFLAVFCAC-----------VHGGLVSEGKD------------------ 322
Query: 338 INLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ-KRDVYSWSAMISG 393
L R+ + I I + ++ + R G I++A + +M + DV W A++SG
Sbjct: 323 -YLRRMTEDYSIIPTIQHYGCMVDLYGRAGRIKEAWNVVKSMPMEPDVLVWGALLSG 378
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 95/222 (42%), Gaps = 40/222 (18%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E + L C A+ G+ H+ I K G+ + + +LI++YAKCG + +A +F
Sbjct: 199 EFTMSGVLAACGRLGALEHGKWAHAYIDKCGMPVDVVLGTALIDMYAKCGSVEKATWVFS 258
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+ P K +++++MI G A + E + +
Sbjct: 259 NLG------------------------------PNKDVMAWSAMISGLAMHGLAEECVGL 288
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIIST-----NLL 197
F M GV PN VT +V + VH G + E + ++ M + + II T ++
Sbjct: 289 FSKMINQGVRPNAVTFLAVFCACVHGGLVSEGKDY----LRRMTEDYSIIPTIQHYGCMV 344
Query: 198 NMYCVCSSLVEARSLFDEMK-ERNIVSWNVMLNGFAKAGLVE 238
++Y + EA ++ M E +++ W +L+G G +E
Sbjct: 345 DLYGRAGRIKEAWNVVKSMPMEPDVLVWGALLSGSRMHGDIE 386
>gi|224098357|ref|XP_002311156.1| predicted protein [Populus trichocarpa]
gi|222850976|gb|EEE88523.1| predicted protein [Populus trichocarpa]
Length = 535
Score = 305 bits (781), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 181/628 (28%), Positives = 306/628 (48%), Gaps = 96/628 (15%)
Query: 38 AVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMIS 97
A+ +G +IH + G++S+ + ++ +YA+CG + AK +F D
Sbjct: 3 ALGRGTEIHDFARQQGIDSDVAVATPIMTMYARCGEVDTAKQLFQEIKGRD--------- 53
Query: 98 GYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVT 157
V+++++I F Q+ +EAL +FR M+ G+ N+V
Sbjct: 54 ----------------------LVAWSAIIAAFVQSGYPQEALSLFRSMQNEGLQANKVI 91
Query: 158 LASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMK 217
L S + + + + + +H +K +D + + T L++MY C A +LF+ M
Sbjct: 92 LLSSLPACAEVSSLKLGKSMHCCAVKANVDLDISVGTALVSMYAKCGFFALALTLFNRMP 151
Query: 218 ERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRA 277
+++V+WN M+NG+A+ G A E+F ++ +LSE
Sbjct: 152 CKDVVTWNAMINGYAQIGEPFPALEMFHKL-------------------QLSE------- 185
Query: 278 MLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGR 337
+ PN +V L+ A +G IH I+K GF+ ++ +I YA CG
Sbjct: 186 -----LNPNSGTMVGLLPAFALLNDLDQGSCIHGKIIKCGFESECHVKTALIDMYAKCGS 240
Query: 338 INLARLQFE-LGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQ 396
++ A F G + SWN +IAG++ +G DA F M+ +
Sbjct: 241 LSGAEFLFHRTGCRKDEVSWNVMIAGYMHSGHAIDAFSAFCQMKLEN------------- 287
Query: 397 NEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNL 456
++PN +T+V+V A+A L+ G H YV+ +
Sbjct: 288 ------------------IQPNIVTIVTVLPAVAHLSALRAGMTLHAYVIRMGFQSKTPV 329
Query: 457 SAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKR 516
+IDMYAKCG ++ + ++F+ ++++ T WN ++ G A+HG + ++++S ++
Sbjct: 330 GNCLIDMYAKCGWLDHSEKIFHEMKNKDT--VSWNVMLAGYAVHGRGSCAIELFSRMQDS 387
Query: 517 NIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLED 576
I+L+S +FI VLS C HAGL+ G + F SM + +EPDL+HY CM DLLGRAG +
Sbjct: 388 EIRLDSFSFINVLSACRHAGLIGEGRKIFDSMSKQHQLEPDLEHYACMADLLGRAGLFNE 447
Query: 577 AEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYAD 636
++I+SMPM+ D +WG LL AS +H NV++ E A L L+ + LSN YA
Sbjct: 448 VLDLIKSMPMEPDAGVWGALLGASTMHSNVQLAEFALHHLDKLEHKNLTHYAALSNTYAR 507
Query: 637 AGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
+GRW D + R ++ G+++ PG+S V
Sbjct: 508 SGRWADVGNTRSKITKTGLRKSPGYSWV 535
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 117/523 (22%), Positives = 217/523 (41%), Gaps = 114/523 (21%)
Query: 8 SVFNS-QKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLIN 66
S+F S Q LQ + ++ L+S+L C+ ++ G+ +H K+ ++ + + +L++
Sbjct: 75 SLFRSMQNEGLQAN--KVILLSSLPACAEVSSLKLGKSMHCCAVKANVDLDISVGTALVS 132
Query: 67 LYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSM 126
+YAKCG + A ++F+ D V N MI+GY ++ + P
Sbjct: 133 MYAKCGFFALALTLFNRMPCKDVVTWNAMINGYA---------QIGEPFP---------- 173
Query: 127 IMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMI 186
ALE+F +++ + PN T+ ++ + L + + +HG +IK
Sbjct: 174 ------------ALEMFHKLQLSELNPNSGTMVGLLPAFALLNDLDQGSCIHGKIIKCGF 221
Query: 187 DGFVIISTNLLNMYCVCSSLVEARSLFDEMK-ERNIVSWNVMLNGFAKAGLVELARELFE 245
+ + T L++MY C SL A LF ++ VSWNV
Sbjct: 222 ESECHVKTALIDMYAKCGSLSGAEFLFHRTGCRKDEVSWNV------------------- 262
Query: 246 RIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGE 305
MI GY+ +A + + M + I PN V IV ++ A A
Sbjct: 263 ------------MIAGYMHSGHAIDAFSAFCQMKLENIQPNIVTIVTVLPAVAHLSALRA 310
Query: 306 GLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQF-ELGIKDHIASWNALIAGFI 364
G+ +H+ +++ GF + +I YA CG ++ + F E+ KD + SWN ++AG+
Sbjct: 311 GMTLHAYVIRMGFQSKTPVGNCLIDMYAKCGWLDHSEKIFHEMKNKDTV-SWNVMLAGYA 369
Query: 365 RNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVS 424
+G + + A+ELF M D+ ++ + + ++
Sbjct: 370 VHG-------------------------------RGSCAIELFSRMQDSEIRLDSFSFIN 398
Query: 425 VFCAIASSGTLKEGRWAHEYVLNNSITLNDNLS--AAIIDMYAKCGSINTAFEVFYHIRD 482
V A +G + EGR + ++ L +L A + D+ + G N ++
Sbjct: 399 VLSACRHAGLIGEGRKIFD-SMSKQHQLEPDLEHYACMADLLGRAGLFNEVLDLI----- 452
Query: 483 RTTSVSP----WNAIICGLAMHGD---ANLTLKIYSDLEKRNI 518
++ + P W A++ MH + A L LE +N+
Sbjct: 453 KSMPMEPDAGVWGALLGASTMHSNVQLAEFALHHLDKLEHKNL 495
>gi|334185448|ref|NP_001078182.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273297|sp|Q9LHN5.1|PP242_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g18840
gi|9294693|dbj|BAB03093.1| unnamed protein product [Arabidopsis thaliana]
gi|332642633|gb|AEE76154.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 678
Score = 305 bits (781), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 186/628 (29%), Positives = 336/628 (53%), Gaps = 15/628 (2%)
Query: 46 HSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRL 105
H KSG N L+NLY+K GL+ +A+++FD + + N +I+ Y++ + +
Sbjct: 11 HIRSIKSGSTLTAVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYVKFNNV 70
Query: 106 NDAREVFDKTPI-KCCVSYTSMIMGFAQND-CWREALEVFRDMRIL---GVIPNEVTLAS 160
+ARE+F+ + ++Y +++ GFA+ D C EA+E+F +M + ++ T+ +
Sbjct: 71 KEARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTT 130
Query: 161 VISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDE--MKE 218
++ S L ++ LHG+++K DG ++L++MY C E ++F+ ++
Sbjct: 131 MVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEF 190
Query: 219 RNIVSWNVMLNGFAKAGLVELARELFERIPS-KDVVSWGTMIDGYLQVERLSEALTMYRA 277
+ V+ N M+ + + G ++ A +F R P D +SW T+I GY Q EAL M +
Sbjct: 191 VDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVS 250
Query: 278 MLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGR 337
M +G+ ++ +++ + G ++H+ ++K G F+ + I+ Y CG
Sbjct: 251 MEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGN 310
Query: 338 INLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQN 397
+ A L ++ S +++I G+ G + +A++LF+++ ++++ W+AM GY
Sbjct: 311 MKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNL 370
Query: 398 EQPNMALELFHGMV-DAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNL 456
QP+ LEL + + P+ + MVSV A + ++ G+ H + L I ++ L
Sbjct: 371 RQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKL 430
Query: 457 SAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKR 516
A +DMY+KCG++ A +F +R T + +NA+I G A HG + + + D+ +
Sbjct: 431 VTAFVDMYSKCGNVEYAERIFDSSFERDTVM--YNAMIAGCAHHGHEAKSFQHFEDMTEG 488
Query: 517 NIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLED 576
K + ITF+ +LS C H GLV GE+YFKSM YN+ P+ HY CM+DL G+A +L+
Sbjct: 489 GFKPDEITFMALLSACRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYGKAYRLDK 548
Query: 577 AEEVIRSM-PMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYA 635
A E++ + ++ D VI G L A + N E+ + + L ++ S+G + ++N YA
Sbjct: 549 AIELMEGIDQVEKDAVILGAFLNACSWNKNTELVKEVEEKLLVIEGSNGSRYIQIANAYA 608
Query: 636 DAGRWEDAFSIRKEMRDCGMKRLPGFSG 663
+GRW++ IR +MR K L FSG
Sbjct: 609 SSGRWDEMQRIRHQMRG---KELEIFSG 633
Score = 147 bits (372), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 108/443 (24%), Positives = 205/443 (46%), Gaps = 36/443 (8%)
Query: 39 VSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD-SC-STLDPVACNIMI 96
V G+Q+H ++ K+G + F +SLI++Y+KCG + ++F+ SC +D VA N MI
Sbjct: 141 VFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEFVDSVARNAMI 200
Query: 97 SGYIRNDRLNDAREVFDKTP-IKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNE 155
+ Y R ++ A VF + P + +S+ ++I G+AQN EAL++ M G+ +E
Sbjct: 201 AAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSMEENGLKWDE 260
Query: 156 VTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDE 215
+ +V++ L + + +H V+K +S+ ++++YC C ++ A S
Sbjct: 261 HSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLL 320
Query: 216 MKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMY 275
N+ S + M+ G++ G + A+ LF+ + K++V W M GYL + + L +
Sbjct: 321 YGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELA 380
Query: 276 RAMLCDGI-APNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAA 334
RA + + P+ +++V ++ AC G +IH ++ G + + Y+
Sbjct: 381 RAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSK 440
Query: 335 CGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGY 394
CG + A F+ + +NA+IAG +G
Sbjct: 441 CGNVEYAERIFDSSFERDTVMYNAMIAGCAHHG--------------------------- 473
Query: 395 AQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG-RWAHEYVLNNSITLN 453
+ + F M + G KP+EIT +++ A G + EG ++ + +I+
Sbjct: 474 ----HEAKSFQHFEDMTEGGFKPDEITFMALLSACRHRGLVLEGEKYFKSMIEAYNISPE 529
Query: 454 DNLSAAIIDMYAKCGSINTAFEV 476
+ID+Y K ++ A E+
Sbjct: 530 TGHYTCMIDLYGKAYRLDKAIEL 552
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/295 (22%), Positives = 128/295 (43%), Gaps = 32/295 (10%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E + + L S+ ++ G+++H+ + K+G SN F+ + ++++Y KCG + A+S
Sbjct: 260 EHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHL 319
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+ + + MI GY ++ +A+ +FD K V +T+M +G+ LE+
Sbjct: 320 LYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLEL 379
Query: 143 FRDMRILGV-IPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYC 201
R P+ + + SV+ + + + +HG ++ I + T ++MY
Sbjct: 380 ARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYS 439
Query: 202 VCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDG 261
C ++ A +FD ER+ V +N M+ G A G + + FE M +G
Sbjct: 440 KCGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFE-----------DMTEG 488
Query: 262 YLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKA 316
G P+++ + L+SAC EG + +++A
Sbjct: 489 --------------------GFKPDEITFMALLSACRHRGLVLEGEKYFKSMIEA 523
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 120/267 (44%), Gaps = 45/267 (16%)
Query: 305 EGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFI 364
+G H +K+G +++ Y+ G + AR F+ ++ ++ SWNA+IA ++
Sbjct: 6 DGFLHHIRSIKSGSTLTAVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYV 65
Query: 365 RNGMIEDARQLFNNMQ-KRDVYSWSAMISGYAQNEQ-PNMALELF---HGMVDAGVKPNE 419
+ +++AR+LF + +RD+ +++ ++SG+A+ + + A+E+F H + ++
Sbjct: 66 KFNNVKEARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDD 125
Query: 420 ITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAI---IDMYAKCGS------- 469
T+ ++ A + G H ++ T ND A+ I MY+KCG
Sbjct: 126 FTVTTMVKLSAKLTNVFYGEQLHGVLVK---TGNDGTKFAVSSLIHMYSKCGKFKEVCNI 182
Query: 470 --------------------------INTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDA 503
I+ A VF+ + ++S WN +I G A +G
Sbjct: 183 FNGSCVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTIS-WNTLIAGYAQNGYE 241
Query: 504 NLTLKIYSDLEKRNIKLNSITFIGVLS 530
LK+ +E+ +K + +F VL+
Sbjct: 242 EEALKMAVSMEENGLKWDEHSFGAVLN 268
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 102/240 (42%), Gaps = 42/240 (17%)
Query: 15 ANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLI 74
AN N+ L +VS L CS + G++IH ++G+ + + + +++Y+KCG +
Sbjct: 385 ANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNV 444
Query: 75 SQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQND 134
A+ +FDS D V Y +MI G A +
Sbjct: 445 EYAERIFDSSFERDTVM-------------------------------YNAMIAGCAHHG 473
Query: 135 CWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIIS- 193
++ + F DM G P+E+T +++S+ H G + E K MI+ + I
Sbjct: 474 HEAKSFQHFEDMTEGGFKPDEITFMALLSACRHRGLVLEGEKY----FKSMIEAYNISPE 529
Query: 194 ----TNLLNMYCVCSSLVEARSLFD--EMKERNIVSWNVMLNGFAKAGLVELARELFERI 247
T ++++Y L +A L + + E++ V LN + EL +E+ E++
Sbjct: 530 TGHYTCMIDLYGKAYRLDKAIELMEGIDQVEKDAVILGAFLNACSWNKNTELVKEVEEKL 589
>gi|356532944|ref|XP_003535029.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Glycine max]
Length = 813
Score = 305 bits (781), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 187/633 (29%), Positives = 311/633 (49%), Gaps = 95/633 (15%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
L C+ G Q+H L+ SG E + + N+L+ +Y+KCG
Sbjct: 220 LSICATRGNFCAGTQLHGLVIGSGFEFDPQVANTLVAMYSKCG----------------- 262
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
N++ AR++F+ P V++ +I G+ QN EA +F M
Sbjct: 263 ---NLLY-----------ARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISA 308
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
GV P+ VT AS + S + G + C+ +H +++ + V + + L+++Y
Sbjct: 309 GVKPDSVTFASFLPSILESGSLRHCKEVHSYIVRHRVPFDVYLKSALIDVY--------- 359
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLS 269
K G VE+AR++F++ DV MI GY+
Sbjct: 360 ----------------------FKGGDVEMARKIFQQNILVDVAVCTAMISGYVLHGLNI 397
Query: 270 EALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATII 329
+A+ +R ++ +G+ N + + ++ AC A G ++H I+K + + + I
Sbjct: 398 DAINTFRWLIQEGMVTNSLTMASVLPACAAVAALKPGKELHCHILKKRLENIVNVGSAIT 457
Query: 330 HFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSA 389
YA CGR++LA + F M RD W++
Sbjct: 458 DMYAKCGRLDLAY-------------------------------EFFRRMSDRDSVCWNS 486
Query: 390 MISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNS 449
MIS ++QN +P +A++LF M +G K + +++ S A A+ L G+ H YV+ N+
Sbjct: 487 MISSFSQNGKPEIAIDLFRQMGMSGAKFDSVSLSSALSAAANLPALYYGKEMHGYVIRNA 546
Query: 450 ITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKI 509
+ + +++ +IDMY+KCG++ A+ VF ++ D VS WN+II HG L +
Sbjct: 547 FSSDTFVASTLIDMYSKCGNLALAWCVF-NLMDGKNEVS-WNSIIAAYGNHGCPRECLDL 604
Query: 510 YSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLG 569
Y ++ + I + +TF+ ++S C HAGLVD G YF M Y + ++HY CMVDL G
Sbjct: 605 YHEMLRAGIHPDHVTFLVIISACGHAGLVDEGIHYFHCMTREYGIGARMEHYACMVDLYG 664
Query: 570 RAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVL 629
RAG++ +A + I+SMP D +WGTLL A R+HGNVE+ + A++ L L P + VL
Sbjct: 665 RAGRVHEAFDTIKSMPFTPDAGVWGTLLGACRLHGNVELAKLASRHLLELDPKNSGYYVL 724
Query: 630 LSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
LSN++ADAG W +R M++ G++++PG+S
Sbjct: 725 LSNVHADAGEWASVLKVRSLMKEKGVQKIPGYS 757
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 134/588 (22%), Positives = 238/588 (40%), Gaps = 107/588 (18%)
Query: 26 LVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCS 85
L S R CS V Q +Q+H+ + G+ + ++ LY CG
Sbjct: 14 LESLFRACSDASMVQQARQVHTQVIVGGMGDVCAPSSRVLGLYVLCG------------- 60
Query: 86 TLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRD 145
R DA +F + ++ + + MI G + AL +
Sbjct: 61 ------------------RFRDAGNLFFELELRYALPWNWMIRGLYMLGWFDFALLFYFK 102
Query: 146 MRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSS 205
M V P++ T VI + L + C ++H L + + L+ +Y
Sbjct: 103 MLGSNVSPDKYTFPYVIKACGGLNNVPLCMVVHDTARSLGFHVDLFAGSALIKLYADNGY 162
Query: 206 LVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQV 265
+ +AR +FDE+ R+ + WNVML G+ K+G + A +
Sbjct: 163 IRDARRVFDELPLRDTILWNVMLRGYVKSGDFDNA------------------------I 198
Query: 266 ERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQ 325
E T Y + N V ++S C F G Q+H +++ +GF+ +
Sbjct: 199 GTFCEMRTSYSMV-------NSVTYTCILSICATRGNFCAGTQLHGLVIGSGFEFDPQVA 251
Query: 326 ATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVY 385
T++ Y+ CG + AR F + +WN LIAG+++NG ++A LFN
Sbjct: 252 NTLVAMYSKCGNLLYARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFN-------- 303
Query: 386 SWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYV 445
M+ AGVKP+ +T S +I SG+L+ + H Y+
Sbjct: 304 -----------------------AMISAGVKPDSVTFASFLPSILESGSLRHCKEVHSYI 340
Query: 446 LNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANL 505
+ + + + L +A+ID+Y K G + A ++F ++ V+ A+I G +HG
Sbjct: 341 VRHRVPFDVYLKSALIDVYFKGGDVEMARKIFQ--QNILVDVAVCTAMISGYVLHGLNID 398
Query: 506 TLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYF-----KSMKSVYNVEPDLKH 560
+ + L + + NS+T VL C + G+ K ++++ NV
Sbjct: 399 AINTFRWLIQEGMVTNSLTMASVLPACAAVAALKPGKELHCHILKKRLENIVNVG----- 453
Query: 561 YGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEV 608
+ D+ + G+L+ A E R M + D V W +++++ +G E+
Sbjct: 454 -SAITDMYAKCGRLDLAYEFFRRMSDR-DSVCWNSMISSFSQNGKPEI 499
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 89/363 (24%), Positives = 151/363 (41%), Gaps = 67/363 (18%)
Query: 13 QKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCG 72
Q+ + NS L + S L C+A A+ G+++H I K LE+ + +++ ++YAKCG
Sbjct: 408 QEGMVTNS---LTMASVLPACAAVAALKPGKELHCHILKKRLENIVNVGSAITDMYAKCG 464
Query: 73 LISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQ 132
+ A F S D V N MIS F+Q
Sbjct: 465 RLDLAYEFFRRMSDRDSVCWNSMIS-------------------------------SFSQ 493
Query: 133 NDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVII 192
N A+++FR M + G + V+L+S +S++ +L ++ + +HG VI+ +
Sbjct: 494 NGKPEIAIDLFRQMGMSGAKFDSVSLSSALSAAANLPALYYGKEMHGYVIRNAFSSDTFV 553
Query: 193 STNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDV 252
++ L++MY C +L A +F+ M +N VSWN ++ + G
Sbjct: 554 ASTLIDMYSKCGNLALAWCVFNLMDGKNEVSWNSIIAAYGNHGCPR-------------- 599
Query: 253 VSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQ-IHS 311
E L +Y ML GI P+ V + +ISACG A EG+ H
Sbjct: 600 -----------------ECLDLYHEMLRAGIHPDHVTFLVIISACGHAGLVDEGIHYFHC 642
Query: 312 IIVKAGFDCYDFIQATIIHFYAACGRINLARLQFE-LGIKDHIASWNALIAGFIRNGMIE 370
+ + G A ++ Y GR++ A + + W L+ +G +E
Sbjct: 643 MTREYGIGARMEHYACMVDLYGRAGRVHEAFDTIKSMPFTPDAGVWGTLLGACRLHGNVE 702
Query: 371 DAR 373
A+
Sbjct: 703 LAK 705
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 70/332 (21%), Positives = 128/332 (38%), Gaps = 39/332 (11%)
Query: 293 LISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDH 352
L AC A + Q+H+ ++ G + ++ Y CGR
Sbjct: 17 LFRACSDASMVQQARQVHTQVIVGGMGDVCAPSSRVLGLYVLCGR--------------- 61
Query: 353 IASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVD 412
DA LF ++ R W+ MI G + AL + M+
Sbjct: 62 ----------------FRDAGNLFFELELRYALPWNWMIRGLYMLGWFDFALLFYFKMLG 105
Query: 413 AGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINT 472
+ V P++ T V A + H+ + ++ +A+I +YA G I
Sbjct: 106 SNVSPDKYTFPYVIKACGGLNNVPLCMVVHDTARSLGFHVDLFAGSALIKLYADNGYIRD 165
Query: 473 AFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTC 532
A VF + R T + WN ++ G GD + + + ++ +NS+T+ +LS C
Sbjct: 166 ARRVFDELPLRDTIL--WNVMLRGYVKSGDFDNAIGTFCEMRTSYSMVNSVTYTCILSIC 223
Query: 533 CHAGLVDLGERYFK-SMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVV 591
G G + + S + +P + + +V + + G L A ++ +MP + D V
Sbjct: 224 ATRGNFCAGTQLHGLVIGSGFEFDPQVAN--TLVAMYSKCGNLLYARKLFNTMP-QTDTV 280
Query: 592 IWGTLLAASRIHGNVEVGERAAKSL--AGLQP 621
W L+A +G + ++ AG++P
Sbjct: 281 TWNGLIAGYVQNGFTDEAAPLFNAMISAGVKP 312
>gi|449448280|ref|XP_004141894.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Cucumis sativus]
gi|449513125|ref|XP_004164238.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Cucumis sativus]
Length = 645
Score = 305 bits (781), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 158/434 (36%), Positives = 252/434 (58%), Gaps = 6/434 (1%)
Query: 231 FAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMI 290
+A G ++ + +F +V S+ +I ++Q A Y ML G+ PN
Sbjct: 89 YAALGRLDCSVFVFNTFDEPNVFSFSAIIHSHVQSRLFDRAFGYYSQMLSCGVEPNAFTF 148
Query: 291 VDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIK 350
++ +C ++ G+ L +I + G D Y ++ ++ YA G + AR F+ +
Sbjct: 149 SSVLKSC--SLESGKVLHCQAIKLGLGSDLY--VRTGLVDVYARGGDVVCARQLFDKMPE 204
Query: 351 DHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGM 410
+ S ++ + + G ++ AR LF M++RDV W+ MI GYAQ+ PN +L+LF M
Sbjct: 205 RSLVSLTTMLTCYSKMGELDKARSLFEGMKERDVVCWNVMIGGYAQSGVPNESLKLFRRM 264
Query: 411 VDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSI 470
+ A PNE+T+++V A G L+ GRW H Y+ N I +N ++ A+IDMY+KCGS+
Sbjct: 265 LVAKAIPNEVTVLAVLSACGQLGALESGRWIHSYIENKGIQINVHVGTALIDMYSKCGSL 324
Query: 471 NTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLS 530
A VF IRD+ V WN++I G AMHG + L+++ ++ + K ITFIG+LS
Sbjct: 325 EDARLVFDRIRDK--DVVAWNSMIVGYAMHGFSQHALQLFEEMTETGHKPTDITFIGILS 382
Query: 531 TCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADV 590
C H GLV+ G +F+ M+ Y +EP ++HYGCMV+LLGRAG LE+A ++++M + AD
Sbjct: 383 ACGHGGLVEEGRSFFRLMRDKYGIEPKIEHYGCMVNLLGRAGHLEEAYGLVKNMTIAADP 442
Query: 591 VIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEM 650
V+WGTLL R+H N+++GE AK L + ++ + VLLSN+YA G WE +R M
Sbjct: 443 VLWGTLLGCCRLHVNIKLGEEIAKFLVDQKLANSGTYVLLSNMYAATGNWEGVAKMRTLM 502
Query: 651 RDCGMKRLPGFSGV 664
++ G+++ G S +
Sbjct: 503 KEHGIEKEHGCSSI 516
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 126/492 (25%), Positives = 220/492 (44%), Gaps = 73/492 (14%)
Query: 38 AVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMIS 97
+V+ QIH+ + + GL N + L YA G + + +F++
Sbjct: 59 SVAHLLQIHASLLRRGLYHNPILNFKLQRSYAALGRLDCSVFVFNT-------------- 104
Query: 98 GYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVT 157
FD+ + S++++I Q+ + A + M GV PN T
Sbjct: 105 --------------FDEPNV---FSFSAIIHSHVQSRLFDRAFGYYSQMLSCGVEPNAFT 147
Query: 158 LASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMK 217
+SV+ S G ++LH IKL + + + T L+++Y +V AR LFD+M
Sbjct: 148 FSSVLKSCSLESG----KVLHCQAIKLGLGSDLYVRTGLVDVYARGGDVVCARQLFDKMP 203
Query: 218 ERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRA 277
ER++VS ML ++K G ++ AR LFE + +DVV W MI GY Q +E+L ++R
Sbjct: 204 ERSLVSLTTMLTCYSKMGELDKARSLFEGMKERDVVCWNVMIGGYAQSGVPNESLKLFRR 263
Query: 278 MLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGR 337
ML PN+V ++ ++SACG+ A G IHS I G + +I Y+ CG
Sbjct: 264 MLVAKAIPNEVTVLAVLSACGQLGALESGRWIHSYIENKGIQINVHVGTALIDMYSKCGS 323
Query: 338 INLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQN 397
+ ARL F+ + +WN++I G+ + G++Q+
Sbjct: 324 LEDARLVFDRIRDKDVVAWNSMIVGY--------------------------AMHGFSQH 357
Query: 398 EQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNN-SITLNDNL 456
AL+LF M + G KP +IT + + A G ++EGR + + I
Sbjct: 358 -----ALQLFEEMTETGHKPTDITFIGILSACGHGGLVEEGRSFFRLMRDKYGIEPKIEH 412
Query: 457 SAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSP--WNAIICGLAMHGDANLTLKIYSDLE 514
++++ + G + A+ + +++ T + P W ++ +H + L +I L
Sbjct: 413 YGCMVNLLGRAGHLEEAYGL---VKNMTIAADPVLWGTLLGCCRLHVNIKLGEEIAKFLV 469
Query: 515 KRNIKLNSITFI 526
+ + NS T++
Sbjct: 470 DQKLA-NSGTYV 480
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 138/279 (49%), Gaps = 35/279 (12%)
Query: 28 SALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTL 87
S L+ CS + G+ +H K GL S+ +++ L+++YA+ G + A+ +FD
Sbjct: 150 SVLKSCS----LESGKVLHCQAIKLGLGSDLYVRTGLVDVYARGGDVVCARQLFDKMPER 205
Query: 88 DPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMR 147
V+ M++ Y + L+ AR +F+ + V + MI G+AQ+ E+L++FR M
Sbjct: 206 SLVSLTTMLTCYSKMGELDKARSLFEGMKERDVVCWNVMIGGYAQSGVPNESLKLFRRML 265
Query: 148 ILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLV 207
+ IPNEVT+ +V+S+ LG + R +H + I V + T L++MY C SL
Sbjct: 266 VAKAIPNEVTVLAVLSACGQLGALESGRWIHSYIENKGIQINVHVGTALIDMYSKCGSLE 325
Query: 208 EARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVER 267
+AR +FD ++++++V+WN M+ G+A G + A +LFE
Sbjct: 326 DARLVFDRIRDKDVVAWNSMIVGYAMHGFSQHALQLFEE--------------------- 364
Query: 268 LSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEG 306
M G P D+ + ++SACG EG
Sbjct: 365 ----------MTETGHKPTDITFIGILSACGHGGLVEEG 393
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 80/378 (21%), Positives = 153/378 (40%), Gaps = 71/378 (18%)
Query: 307 LQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRN 366
LQIH+ +++ G + + YAA GR++ +
Sbjct: 64 LQIHASLLRRGLYHNPILNFKLQRSYAALGRLDCSVF----------------------- 100
Query: 367 GMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVF 426
+FN + +V+S+SA+I + Q+ + A + M+ GV+PN T F
Sbjct: 101 --------VFNTFDEPNVFSFSAIIHSHVQSRLFDRAFGYYSQMLSCGVEPNAFT----F 148
Query: 427 CAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRT-- 484
++ S +L+ G+ H + + + + ++D+YA+ G + A ++F + +R+
Sbjct: 149 SSVLKSCSLESGKVLHCQAIKLGLGSDLYVRTGLVDVYARGGDVVCARQLFDKMPERSLV 208
Query: 485 ---------------------------TSVSPWNAIICGLAMHGDANLTLKIYSDLEKRN 517
V WN +I G A G N +LK++ +
Sbjct: 209 SLTTMLTCYSKMGELDKARSLFEGMKERDVVCWNVMIGGYAQSGVPNESLKLFRRMLVAK 268
Query: 518 IKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDA 577
N +T + VLS C G ++ G R+ S ++ ++ ++D+ + G LEDA
Sbjct: 269 AIPNEVTVLAVLSACGQLGALESG-RWIHSYIENKGIQINVHVGTALIDMYSKCGSLEDA 327
Query: 578 EEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADA 637
V + K DVV W +++ +HG + + + + + H P+ + I +
Sbjct: 328 RLVFDRIRDK-DVVAWNSMIVGYAMHGFSQHALQLFEEMT--ETGHKPTDITFIGILSAC 384
Query: 638 GRW---EDAFSIRKEMRD 652
G E+ S + MRD
Sbjct: 385 GHGGLVEEGRSFFRLMRD 402
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 101/238 (42%), Gaps = 62/238 (26%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E+ +++ L C A+ G+ IHS I G++ N + +LI++Y+KCG
Sbjct: 273 EVTVLAVLSACGQLGALESGRWIHSYIENKGIQINVHVGTALIDMYSKCG---------- 322
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
L DAR VFD+ K V++ SMI+G+A + + AL++
Sbjct: 323 ---------------------SLEDARLVFDRIRDKDVVAWNSMIVGYAMHGFSQHALQL 361
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
F +M G P ++T ++S+ H G + E R +LM D + I
Sbjct: 362 FEEMTETGHKPTDITFIGILSACGHGGLVEEGRSF----FRLMRDKYGI----------- 406
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIP-SKDVVSWGTMI 259
E I + M+N +AG +E A L + + + D V WGT++
Sbjct: 407 ---------------EPKIEHYGCMVNLLGRAGHLEEAYGLVKNMTIAADPVLWGTLL 449
>gi|255558480|ref|XP_002520265.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540484|gb|EEF42051.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 681
Score = 305 bits (781), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 196/680 (28%), Positives = 346/680 (50%), Gaps = 41/680 (6%)
Query: 21 DYEL-ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTF-IQNSLINLYAKCG-LISQA 77
D EL +L L+ + H ++ QG+Q+H L K GL + T + N L+ +YA+CG ++ A
Sbjct: 2 DLELRSLARLLQSLNTHSSIHQGKQLHLLFLKKGLINATVSLANRLLQMYARCGGTMTDA 61
Query: 78 KSMFDSCSTLDPVACNIMISGYIR-----------------ND--------------RLN 106
++FD + + N MI GY+R ND L+
Sbjct: 62 HNLFDEMPERNCFSWNTMIEGYMRVGDKERSLKLFDLMPQKNDYSWNVVISGFAKAGELD 121
Query: 107 DAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMR---ILGVIPNEVTLASVIS 163
A+++F++ P + V++ SMI G+A+N REA+ +F+++ + + LASVI
Sbjct: 122 VAKKLFNEMPRRNGVAWNSMIHGYARNGFAREAVGLFKELNSNPLEKSCGDTFVLASVIG 181
Query: 164 SSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVS 223
+ LG I + +H ++ ++ ++ ++L+N+Y C L A + M E + S
Sbjct: 182 ACADLGAIEYGKQVHARILMDDVELDSVLISSLINLYAKCGHLDTANYVLKMMDEVDDFS 241
Query: 224 WNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGI 283
+ ++ G+A G + A +F + V W ++I GY+ +A + M + +
Sbjct: 242 LSALIMGYANCGRMSDAVRIFRTKSNPCFVVWNSLISGYVNNHEEMKAFALVNEMKNNRV 301
Query: 284 APNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLA-R 342
+ I ++SAC Q+H + K G + + I Y+ C N A +
Sbjct: 302 QVDSSTITVILSACSSTGNAQYAKQMHGYVCKVGLIDSVIVASAFIDAYSKCRNPNDACK 361
Query: 343 LQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNM 402
L EL D + N++I + G I DA+ +F M + + SW+++I G AQN P
Sbjct: 362 LFSELKAYDTVL-LNSMITAYCNCGRIRDAKNIFETMPSKSLISWNSIIVGLAQNAYPLE 420
Query: 403 ALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIID 462
AL++F M ++ + ++ SV A A +L+ G + + + +S +++D
Sbjct: 421 ALDVFGKMNKLDLRMDRFSLASVISACACISSLELGEQVFARAIITGLESDQAVSTSLVD 480
Query: 463 MYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNS 522
Y KCG I ++F + +T VS WN+++ G A +G TL +++++++ ++
Sbjct: 481 FYCKCGFIENGRKLFDSMI-KTDEVS-WNSMLMGYATNGYGLETLTLFNEMKQAGLRPTD 538
Query: 523 ITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIR 582
ITF GVLS C H GLV+ G ++F MK Y+++P ++HY CMVDL RAG L++A ++
Sbjct: 539 ITFTGVLSACDHCGLVEEGRKWFNIMKYDYHIDPGIEHYSCMVDLFARAGCLKEALNLVE 598
Query: 583 SMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWED 642
MP +AD +W ++L HG+ ++G++ A+ + L P + V LS I+A +G WE
Sbjct: 599 HMPFEADCSMWSSVLRGCVAHGDKDLGKKVAQQIIQLNPESSSAYVQLSGIFATSGDWES 658
Query: 643 AFSIRKEMRDCGMKRLPGFS 662
+ +RK M + +K+ PGFS
Sbjct: 659 SALVRKIMTEKQVKKHPGFS 678
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 110/248 (44%), Gaps = 35/248 (14%)
Query: 2 PLDHFHSVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQ 61
PL+ K +L+ + LA S + C+ ++ G+Q+ + +GLES+ +
Sbjct: 418 PLEALDVFGKMNKLDLRMDRFSLA--SVISACACISSLELGEQVFARAIITGLESDQAVS 475
Query: 62 NSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCV 121
SL++ Y KCG I + +FDS D V+ N
Sbjct: 476 TSLVDFYCKCGFIENGRKLFDSMIKTDEVSWN---------------------------- 507
Query: 122 SYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLV 181
SM+MG+A N E L +F +M+ G+ P ++T V+S+ H G + E R ++
Sbjct: 508 ---SMLMGYATNGYGLETLTLFNEMKQAGLRPTDITFTGVLSACDHCGLVEEGRKWFNIM 564
Query: 182 -IKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMK-ERNIVSWNVMLNGFAKAGLVEL 239
ID + + +++++ L EA +L + M E + W+ +L G G +L
Sbjct: 565 KYDYHIDPGIEHYSCMVDLFARAGCLKEALNLVEHMPFEADCSMWSSVLRGCVAHGDKDL 624
Query: 240 ARELFERI 247
+++ ++I
Sbjct: 625 GKKVAQQI 632
>gi|449518693|ref|XP_004166371.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Cucumis sativus]
Length = 792
Score = 305 bits (781), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 180/579 (31%), Positives = 293/579 (50%), Gaps = 66/579 (11%)
Query: 88 DPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMR 147
D +A N +IS Y + ++ DA VF + IK +S+ SMI GF+Q EAL FR+M
Sbjct: 233 DLIAQNALISMYTKFSQMADAINVFSRIIIKDLISWGSMIAGFSQLGYELEALCHFREML 292
Query: 148 ILGVI-PNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSL 206
V PNE S S+ L R +HGL IK + + +L +MY
Sbjct: 293 SQSVYQPNEFVFGSAFSACSKLLEPDCGRQIHGLCIKFGLGSDLFAGCSLCDMY------ 346
Query: 207 VEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVE 266
AK G +E AR +F I D+V+W +I G+ V
Sbjct: 347 -------------------------AKCGFLESARTVFYHIEKPDLVAWNAIIAGFASVS 381
Query: 267 RLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQA 326
E+ + + M G+ PNDV ++ L+ AC + G+Q+HS IVK GF+ +
Sbjct: 382 NAKESSSFFSQMRHTGLVPNDVTVLSLLCACSEPVMLNHGIQVHSYIVKMGFNLDIPVCN 441
Query: 327 TIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNM-QKRDVY 385
+++ Y+ C +N DA Q+F ++ K D+
Sbjct: 442 SLLSMYSKCSNLN-------------------------------DALQVFEDIGNKADIV 470
Query: 386 SWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYV 445
SW+ +++ Q Q L L M + +KP+ +T+ +V + + + G H ++
Sbjct: 471 SWNTLLTACLQQNQAGEVLRLTKLMFASRIKPDHVTLTNVLVSSGQIASYEVGSQIHCFI 530
Query: 446 LNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANL 505
+ + + L+ ++S A+I+MY KCGS+ A ++F I + + W+++I G A G
Sbjct: 531 MKSGLNLDISVSNALINMYTKCGSLECARKMFDSIGN--PDIISWSSLIVGYAQAGCGKE 588
Query: 506 TLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMV 565
+++ + +K N ITF+G+L+ C H G+V+ G + +++M+ Y + P +H CMV
Sbjct: 589 AFELFRTMRGLGVKPNEITFVGILTACSHIGMVEEGLKLYRTMQEDYRISPTKEHCSCMV 648
Query: 566 DLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGP 625
DLL RAG L+ AE+ IR MP DVV+W TLLAA ++HGN+EVG+RAA+++ + PS+
Sbjct: 649 DLLARAGCLDVAEDFIRQMPFVPDVVVWKTLLAACKVHGNLEVGKRAAENVLKIDPSNSA 708
Query: 626 SRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
+ V+L NI+A +G W+D +R MR + ++PG S +
Sbjct: 709 AVVMLCNIHASSGHWKDFARLRSSMRRMDVGKVPGQSWI 747
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 149/626 (23%), Positives = 261/626 (41%), Gaps = 133/626 (21%)
Query: 33 CSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVAC 92
CS+ ++ G++IH + + + +QN ++++Y KCG
Sbjct: 108 CSSLRSLEHGRKIHRHMLTCNYQPDMILQNHILSMYGKCG-------------------- 147
Query: 93 NIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVI 152
L +AR +FD P+K VS+TSMI G+++ A+ ++ M G I
Sbjct: 148 -----------SLKEARNMFDSMPLKNVVSWTSMISGYSRYGEEDNAITLYVQMLRSGHI 196
Query: 153 PNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSL 212
P+ T S++ S L R LH V+K +I L++MY +
Sbjct: 197 PDHFTFGSIVKSCSGLDDFKLARQLHAHVLKSEFGADLIAQNALISMY----------TK 246
Query: 213 FDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEAL 272
F +M + A +F RI KD++SWG+MI G+ Q+ EAL
Sbjct: 247 FSQMAD---------------------AINVFSRIIIKDLISWGSMIAGFSQLGYELEAL 285
Query: 273 TMYRAMLCDGI-APNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHF 331
+R ML + PN+ + SAC + + G QIH + +K G F ++
Sbjct: 286 CHFREMLSQSVYQPNEFVFGSAFSACSKLLEPDCGRQIHGLCIKFGLGSDLFAGCSLCDM 345
Query: 332 YAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMI 391
YA CG +E AR +F +++K D+ +W+A+I
Sbjct: 346 YAKCG-------------------------------FLESARTVFYHIEKPDLVAWNAII 374
Query: 392 SGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSIT 451
+G+A + F M G+ PN++T++S+ CA + L G H Y++
Sbjct: 375 AGFASVSNAKESSSFFSQMRHTGLVPNDVTVLSLLCACSEPVMLNHGIQVHSYIVKMGFN 434
Query: 452 LNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYS 511
L+ + +++ MY+KC ++N A +VF I ++ VS WN ++ A L++
Sbjct: 435 LDIPVCNSLLSMYSKCSNLNDALQVFEDIGNKADIVS-WNTLLTACLQQNQAGEVLRLTK 493
Query: 512 DLEKRNIKLNSITFIGVLSTCCHAGLVDLGER-YFKSMKSVYNVEPDLKHYGCMVDLLGR 570
+ IK + +T VL + ++G + + MKS N+ D+ ++++ +
Sbjct: 494 LMFASRIKPDHVTLTNVLVSSGQIASYEVGSQIHCFIMKSGLNL--DISVSNALINMYTK 551
Query: 571 AGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLL 630
G LE A ++ S+ D++ W +L+
Sbjct: 552 CGSLECARKMFDSIG-NPDIISWSSLIVG------------------------------- 579
Query: 631 SNIYADAGRWEDAFSIRKEMRDCGMK 656
YA AG ++AF + + MR G+K
Sbjct: 580 ---YAQAGCGKEAFELFRTMRGLGVK 602
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 118/482 (24%), Positives = 203/482 (42%), Gaps = 96/482 (19%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E SA CS + G+QIH L K GL S+ F SL ++YAKCG + A+++F
Sbjct: 301 EFVFGSAFSACSKLLEPDCGRQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLESARTVFY 360
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
D VA N ++I GFA +E+
Sbjct: 361 HIEKPDLVAWN-------------------------------AIIAGFASVSNAKESSSF 389
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
F MR G++PN+VT+ S++ + + +H ++K+ + + + +LL+MY
Sbjct: 390 FSQMRHTGLVPNDVTVLSLLCACSEPVMLNHGIQVHSYIVKMGFNLDIPVCNSLLSMYSK 449
Query: 203 CSSLVEARSLFDEMKER-NIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDG 261
CS+L +A +F+++ + +IVSWN T++
Sbjct: 450 CSNLNDALQVFEDIGNKADIVSWN-------------------------------TLLTA 478
Query: 262 YLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCY 321
LQ + E L + + M I P+ V + +++ + G+ ++ G QIH I+K+G +
Sbjct: 479 CLQQNQAGEVLRLTKLMFASRIKPDHVTLTNVLVSSGQIASYEVGSQIHCFIMKSGLNLD 538
Query: 322 DFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQK 381
+ +I+ Y CG + AR F+ I SW++LI G+ + G ++
Sbjct: 539 ISVSNALINMYTKCGSLECARKMFDSIGNPDIISWSSLIVGYAQAGCGKE---------- 588
Query: 382 RDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWA 441
A ELF M GVKPNEIT V + A + G ++EG
Sbjct: 589 ---------------------AFELFRTMRGLGVKPNEITFVGILTACSHIGMVEEGLKL 627
Query: 442 HEYVLNN-SITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMH 500
+ + + I+ + ++D+ A+ G ++ A E F V W ++ +H
Sbjct: 628 YRTMQEDYRISPTKEHCSCMVDLLARAGCLDVA-EDFIRQMPFVPDVVVWKTLLAACKVH 686
Query: 501 GD 502
G+
Sbjct: 687 GN 688
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 89/392 (22%), Positives = 162/392 (41%), Gaps = 75/392 (19%)
Query: 8 SVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINL 67
S F SQ + ++ ++S L CS + ++ G Q+HS I K G
Sbjct: 387 SSFFSQMRHTGLVPNDVTVLSLLCACSEPVMLNHGIQVHSYIVKMGF------------- 433
Query: 68 YAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKC-CVSYTSM 126
LD CN ++S Y + LNDA +VF+ K VS+ ++
Sbjct: 434 ------------------NLDIPVCNSLLSMYSKCSNLNDALQVFEDIGNKADIVSWNTL 475
Query: 127 IMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMI 186
+ Q + E L + + M + P+ VTL +V+ SS + +H ++K +
Sbjct: 476 LTACLQQNQAGEVLRLTKLMFASRIKPDHVTLTNVLVSSGQIASYEVGSQIHCFIMKSGL 535
Query: 187 DGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFER 246
+ + +S L+NMY C G +E AR++F+
Sbjct: 536 NLDISVSNALINMYTKC-------------------------------GSLECARKMFDS 564
Query: 247 IPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEG 306
I + D++SW ++I GY Q EA ++R M G+ PN++ V +++AC EG
Sbjct: 565 IGNPDIISWSSLIVGYAQAGCGKEAFELFRTMRGLGVKPNEITFVGILTACSHIGMVEEG 624
Query: 307 LQIHSI------IVKAGFDCYDFIQATIIHFYAACGRINLAR-LQFELGIKDHIASWNAL 359
L+++ I C + ++ A G +++A ++ + W L
Sbjct: 625 LKLYRTMQEDYRISPTKEHC-----SCMVDLLARAGCLDVAEDFIRQMPFVPDVVVWKTL 679
Query: 360 IAGFIRNGMIEDARQLFNNMQKRDVYSWSAMI 391
+A +G +E ++ N+ K D + +A++
Sbjct: 680 LAACKVHGNLEVGKRAAENVLKIDPSNSAAVV 711
>gi|345505216|gb|AEN99832.1| chlororespiratory reduction 4 [Capsella bursa-pastoris]
Length = 617
Score = 305 bits (781), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 186/530 (35%), Positives = 290/530 (54%), Gaps = 45/530 (8%)
Query: 137 REALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNL 196
++AL +F M GV ++ +++ V+ + LG + +HG++ K + + + L
Sbjct: 107 KQALLLFCLMLENGVSVDKFSMSLVLKACSRLGFVKGGLQIHGILRKTGLCSDLFLQNCL 166
Query: 197 LNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPS--KDVVS 254
+ +Y C L AR +FD M +R+ VS+N M++G+ K GL+E ARELF+ +P K+++S
Sbjct: 167 IGLYLKCGCLGFARQIFDRMPQRDSVSFNSMIDGYVKRGLIESARELFDLMPREVKNLIS 226
Query: 255 WGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIV 314
W ++I GY Q DG VD+ S M + + +S+I
Sbjct: 227 WNSIISGYAQTS--------------DG--------VDIASNLFAEMPEKDLISWNSMI- 263
Query: 315 KAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQ 374
Y GRI A+ F+ + + +W +I G+ + G + A+
Sbjct: 264 ---------------DGYVKHGRIEDAKDLFDAMPRRDVVTWATMIDGYAKLGFVHQAKT 308
Query: 375 LFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGM-VDAGVKPNEITMVSVFCAIASSG 433
LF+ M RDV S+++M++GY QN+ ALE+F M ++ + P+E T+V V AIA G
Sbjct: 309 LFDQMPHRDVVSYNSMMAGYVQNKYHMEALEIFSDMEKESHLSPDETTLVIVLSAIAQLG 368
Query: 434 TLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAI 493
L + H Y++ L L A+IDMY+KCGSI A VF I ++ S+ WNA+
Sbjct: 369 RLSKAMDMHLYIVEKQFFLGGKLGVALIDMYSKCGSIQHAMLVFEGIENK--SIDHWNAM 426
Query: 494 ICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYN 553
I GLA+HG + +E+R+IK + ITF+GVL+ C H+GLV G F+ M+ +
Sbjct: 427 IGGLAIHGLGESAFDMLLQIERRSIKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHK 486
Query: 554 VEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAA 613
+EP L+HYGCMVD+L R+G +E A+ +I+ MP++ + VIW T L A H E GE
Sbjct: 487 IEPRLQHYGCMVDILSRSGSIELAKNLIQEMPIEPNDVIWRTFLTACNHHKEFETGELVG 546
Query: 614 KSLAGLQPSHGPSR-VLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
K L LQ + PS VLLSN+YA G+W+D IR M++ ++++PG S
Sbjct: 547 KHLI-LQAGYNPSSYVLLSNMYASFGKWKDVRRIRTMMKERKIEKIPGCS 595
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 111/417 (26%), Positives = 180/417 (43%), Gaps = 66/417 (15%)
Query: 26 LVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCS 85
L+S S + S G I S +F E + NS+I+ Y K G I AK +FD+
Sbjct: 224 LISWNSIISGYAQTSDGVDIASNLFAEMPEKDLISWNSMIDGYVKHGRIEDAKDLFDAMP 283
Query: 86 TLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRD 145
D V MI GY + ++ A+ +FD+ P + VSY SM+ G+ QN EALE+F D
Sbjct: 284 RRDVVTWATMIDGYAKLGFVHQAKTLFDQMPHRDVVSYNSMMAGYVQNKYHMEALEIFSD 343
Query: 146 M-RILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCS 204
M + + P+E TL V+S+ LG + + +H +++ + L++MY C
Sbjct: 344 MEKESHLSPDETTLVIVLSAIAQLGRLSKAMDMHLYIVEKQFFLGGKLGVALIDMYSKCG 403
Query: 205 SLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQ 264
S+ A +F+ ++ ++I WN M+ G A GL E A D LQ
Sbjct: 404 SIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESA------------------FDMLLQ 445
Query: 265 VERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFI 324
+ER S I P+D+ V +++AC HS +VK G C++ +
Sbjct: 446 IERRS-------------IKPDDITFVGVLNACS-----------HSGLVKEGLLCFELM 481
Query: 325 QATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNM--QKR 382
+ + I+ + + ++ R+G IE A+ L M +
Sbjct: 482 RR-------------------KHKIEPRLQHYGCMVDILSRSGSIELAKNLIQEMPIEPN 522
Query: 383 DVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGR 439
DV + + + E L H ++ AG P+ ++S AS G K+ R
Sbjct: 523 DVIWRTFLTACNHHKEFETGELVGKHLILQAGYNPSSYVLLSNM--YASFGKWKDVR 577
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 106/374 (28%), Positives = 185/374 (49%), Gaps = 33/374 (8%)
Query: 250 KDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQI 309
+D W +I + + +AL ++ ML +G++ + + ++ AC R GLQI
Sbjct: 88 EDPFLWNAVIKSHSHGKDPKQALLLFCLMLENGVSVDKFSMSLVLKACSRLGFVKGGLQI 147
Query: 310 HSIIVKAGFDCYD-FIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGM 368
H I+ K G C D F+Q +I Y CG + AR F+ + S+N++I G+++ G+
Sbjct: 148 HGILRKTGL-CSDLFLQNCLIGLYLKCGCLGFARQIFDRMPQRDSVSFNSMIDGYVKRGL 206
Query: 369 IEDARQLFNNMQK--RDVYSWSAMISGYAQ-NEQPNMALELFHGMVDAGVKPNEITMVSV 425
IE AR+LF+ M + +++ SW+++ISGYAQ ++ ++A LF M E ++S
Sbjct: 207 IESARELFDLMPREVKNLISWNSIISGYAQTSDGVDIASNLFAEM-------PEKDLISW 259
Query: 426 FCAIASSGTLKEGRWAHEYVLNNSITLNDNLS-AAIIDMYAKCGSINTAFEVFYHIRDRT 484
I G +K GR L +++ D ++ A +ID YAK G ++ A +F + R
Sbjct: 260 NSMI--DGYVKHGRIEDAKDLFDAMPRRDVVTWATMIDGYAKLGFVHQAKTLFDQMPHR- 316
Query: 485 TSVSPWNAIICGLAMHGDANLTLKIYSDLEKR-NIKLNSITFIGVLSTCCHAGLVDLGER 543
V +N+++ G + L+I+SD+EK ++ + T + VLS G R
Sbjct: 317 -DVVSYNSMMAGYVQNKYHMEALEIFSDMEKESHLSPDETTLVIVLSAIAQLG------R 369
Query: 544 YFKSMK-SVYNVEPDLKHYG----CMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLA 598
K+M +Y VE G ++D+ + G ++ A V + K+ + W ++
Sbjct: 370 LSKAMDMHLYIVEKQFFLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKS-IDHWNAMIG 428
Query: 599 ASRIHGNVEVGERA 612
IHG +GE A
Sbjct: 429 GLAIHG---LGESA 439
>gi|356524187|ref|XP_003530713.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Glycine max]
Length = 705
Score = 305 bits (780), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 189/641 (29%), Positives = 314/641 (48%), Gaps = 102/641 (15%)
Query: 28 SALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTL 87
S L+ C G+ IH+ + K+GL + + +SL+ +YAKC +A +F+
Sbjct: 111 SVLKACGGLYKYVLGKMIHTCLVKTGLMMDIVVGSSLVGMYAKCNAFEKAIWLFNEMPEK 170
Query: 88 DPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMR 147
D N +IS Y Q+ ++EALE F MR
Sbjct: 171 DVACWNTVISCYY-------------------------------QSGNFKEALEYFGLMR 199
Query: 148 ILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIK--LMIDGFVIISTNLLNMYCVCSS 205
G PN VT+ + ISS L + +H +I ++D F IS+ L++MY
Sbjct: 200 RFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGFLLDSF--ISSALVDMY----- 252
Query: 206 LVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY-LQ 264
K G +E+A E+FE++P K VV+W +MI GY L+
Sbjct: 253 --------------------------GKCGHLEMAIEVFEQMPKKTVVAWNSMISGYGLK 286
Query: 265 VERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFI 324
+ +S + +++ M +G+ P + LI C R+ EG +H ++ FI
Sbjct: 287 GDSIS-CIQLFKRMYNEGVKPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQSDVFI 345
Query: 325 QATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDV 384
++++ Y CG++ LA +F + K V
Sbjct: 346 NSSLMDLYFKCGKVELAE-------------------------------NIFKLIPKSKV 374
Query: 385 YSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEY 444
SW+ MISGY + AL LF M + V+P+ IT SV A + L++G H
Sbjct: 375 VSWNVMISGYVAEGKLFEALGLFSEMRKSYVEPDAITFTSVLTACSQLAALEKGEEIHNL 434
Query: 445 VLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDAN 504
++ + N+ + A++DMYAKCG+++ AF VF + R + W ++I HG A
Sbjct: 435 IIEKKLDNNEVVMGALLDMYAKCGAVDEAFSVFKCLPKR--DLVSWTSMITAYGSHGQAY 492
Query: 505 LTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCM 564
+ L++++++ + N+K + +TF+ +LS C HAGLVD G YF M +VY + P ++HY C+
Sbjct: 493 VALELFAEMLQSNMKPDRVTFLAILSACGHAGLVDEGCYYFNQMVNVYGIIPRVEHYSCL 552
Query: 565 VDLLGRAGQLEDAEEVIRSMP-MKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSH 623
+DLLGRAG+L +A E+++ P ++ DV + TL +A R+H N+++G A++L P
Sbjct: 553 IDLLGRAGRLHEAYEILQQNPEIRDDVELLSTLFSACRLHRNIDLGAEIARTLIDKDPDD 612
Query: 624 GPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
+ +LLSN+YA A +W++ +R +M++ G+K+ PG S +
Sbjct: 613 SSTYILLSNMYASAHKWDEVRVVRSKMKELGLKKNPGCSWI 653
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 162/623 (26%), Positives = 277/623 (44%), Gaps = 115/623 (18%)
Query: 26 LVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCS 85
L+ LR C ++ QG+ IH + GL+++ F+ +LINLY C L AK
Sbjct: 6 LLPLLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKNLINLYLSCHLYDHAKC------ 59
Query: 86 TLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVS-YTSMIMGFAQNDCWREALEVFR 144
VFD C +S + ++ G+ +N + EALE+F
Sbjct: 60 -------------------------VFDNMENPCEISLWNGLMAGYTKNYMYVEALELFE 94
Query: 145 DMRILGVI-PNEVTLASVISSSVHLGGIWEC---RMLHGLVIK--LMIDGFVIISTNLLN 198
+ + P+ T SV+ + GG+++ +M+H ++K LM+D +++ ++L+
Sbjct: 95 KLLHYPYLKPDSYTYPSVLKAC---GGLYKYVLGKMIHTCLVKTGLMMD--IVVGSSLVG 149
Query: 199 MYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTM 258
MY C++ +A LF+E +P KDV W T+
Sbjct: 150 MYAKCNAFEKAIWLFNE-------------------------------MPEKDVACWNTV 178
Query: 259 IDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGF 318
I Y Q EAL + M G PN V I IS+C R + G++IH ++ +GF
Sbjct: 179 ISCYYQSGNFKEALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGF 238
Query: 319 DCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNN 378
FI + ++ Y CG + +A FE K + +WN++I+G+ G+ D+
Sbjct: 239 LLDSFISSALVDMYGKCGHLEMAIEVFEQMPKKTVVAWNSMISGY---GLKGDS------ 289
Query: 379 MQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG 438
IS ++LF M + GVKP T+ S+ + S L EG
Sbjct: 290 ------------IS----------CIQLFKRMYNEGVKPTLTTLSSLIMVCSRSARLLEG 327
Query: 439 RWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLA 498
++ H Y + N I + ++++++D+Y KCG + A +F I + V WN +I G
Sbjct: 328 KFVHGYTIRNRIQSDVFINSSLMDLYFKCGKVELAENIFKLI--PKSKVVSWNVMISGYV 385
Query: 499 MHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSM--KSVYNVEP 556
G L ++S++ K ++ ++ITF VL+ C ++ GE + K + N E
Sbjct: 386 AEGKLFEALGLFSEMRKSYVEPDAITFTSVLTACSQLAALEKGEEIHNLIIEKKLDNNEV 445
Query: 557 DLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSL 616
+ G ++D+ + G +++A V + +P K D+V W +++ A HG V +
Sbjct: 446 VM---GALLDMYAKCGAVDEAFSVFKCLP-KRDLVSWTSMITAYGSHGQAYVALELFAEM 501
Query: 617 AGLQPSHGPSRVLLSNIYADAGR 639
LQ + P RV I + G
Sbjct: 502 --LQSNMKPDRVTFLAILSACGH 522
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 104/488 (21%), Positives = 211/488 (43%), Gaps = 96/488 (19%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+ + +A+ C+ + +++G +IH + SG ++FI ++L+++Y KCG + A +F+
Sbjct: 208 VTITTAISSCARLLDLNRGMEIHEELINSGFLLDSFISSALVDMYGKCGHLEMAIEVFEQ 267
Query: 84 CSTLDPVACNIMISGY-IRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
VA N MISGY ++ D ++ +++
Sbjct: 268 MPKKTVVAWNSMISGYGLKGDSIS--------------------------------CIQL 295
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
F+ M GV P TL+S+I + E + +HG I+ I V I+++L+++Y
Sbjct: 296 FKRMYNEGVKPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQSDVFINSSLMDLYFK 355
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
C + A ++F + + +VSWNVM++G+ G
Sbjct: 356 CGKVELAENIFKLIPKSKVVSWNVMISGYVAEG--------------------------- 388
Query: 263 LQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD 322
+L EAL ++ M + P+ + +++AC + A +G +IH++I++ D +
Sbjct: 389 ----KLFEALGLFSEMRKSYVEPDAITFTSVLTACSQLAALEKGEEIHNLIIEKKLDNNE 444
Query: 323 FIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKR 382
+ ++ YA CG ++ A F+ K + SW ++
Sbjct: 445 VVMGALLDMYAKCGAVDEAFSVFKCLPKRDLVSWTSM----------------------- 481
Query: 383 DVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAH 442
I+ Y + Q +ALELF M+ + +KP+ +T +++ A +G + EG +
Sbjct: 482 --------ITAYGSHGQAYVALELFAEMLQSNMKPDRVTFLAILSACGHAGLVDEGCYYF 533
Query: 443 EYVLN-NSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHG 501
++N I + +ID+ + G ++ A+E+ + V + + +H
Sbjct: 534 NQMVNVYGIIPRVEHYSCLIDLLGRAGRLHEAYEILQQNPEIRDDVELLSTLFSACRLHR 593
Query: 502 DANLTLKI 509
+ +L +I
Sbjct: 594 NIDLGAEI 601
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 90/390 (23%), Positives = 159/390 (40%), Gaps = 94/390 (24%)
Query: 25 ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSC 84
L S + CS + +G+ +H ++ ++S+ FI +SL++LY KCG + A+++F
Sbjct: 310 TLSSLIMVCSRSARLLEGKFVHGYTIRNRIQSDVFINSSLMDLYFKCGKVELAENIFKLI 369
Query: 85 STLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFR 144
V+ N+MISGY+ +L EAL +F
Sbjct: 370 PKSKVVSWNVMISGYVAEGKL-------------------------------FEALGLFS 398
Query: 145 DMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCS 204
+MR V P+ +T SV+++ L + + +H L+I+ +D ++ LL+MY C
Sbjct: 399 EMRKSYVEPDAITFTSVLTACSQLAALEKGEEIHNLIIEKKLDNNEVVMGALLDMYAKCG 458
Query: 205 SLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQ 264
++ EA S+F + +R++VSW M+ + G +A ELF
Sbjct: 459 AVDEAFSVFKCLPKRDLVSWTSMITAYGSHGQAYVALELFAE------------------ 500
Query: 265 VERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFI 324
ML + P+ V + ++SACG A EG CY F
Sbjct: 501 -------------MLQSNMKPDRVTFLAILSACGHAGLVDEG-------------CYYFN 534
Query: 325 QATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLF--NNMQKR 382
Q ++ GI + ++ LI R G + +A ++ N +
Sbjct: 535 QMVNVY-----------------GIIPRVEHYSCLIDLLGRAGRLHEAYEILQQNPEIRD 577
Query: 383 DVYSWSAMISGYAQNEQPNMALELFHGMVD 412
DV S + S + ++ E+ ++D
Sbjct: 578 DVELLSTLFSACRLHRNIDLGAEIARTLID 607
>gi|356568485|ref|XP_003552441.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 1011
Score = 305 bits (780), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 184/609 (30%), Positives = 316/609 (51%), Gaps = 19/609 (3%)
Query: 54 LESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFD 113
L+S + +L N G + S TL+P N +++ Y +++ + A+++FD
Sbjct: 291 LQSCSLYHFTLSNSPPPLGTLHALYVKNGSLQTLNP--ANHLLTLYAKSNNMAHAQKLFD 348
Query: 114 KTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWE 173
+ P + ++T +I GFA+ +FR+M+ G PN+ TL+SV+ +
Sbjct: 349 EIPQRNTQTWTILISGFARAGSSEMVFNLFREMQAKGACPNQYTLSSVLKCCSLDNNLQL 408
Query: 174 CRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAK 233
+ +H +++ ID V++ ++L++Y C A LF+ M E ++VSWN+M+ + +
Sbjct: 409 GKGVHAWMLRNGIDVDVVLGNSILDLYLKCKVFEYAERLFELMNEGDVVSWNIMIGAYLR 468
Query: 234 AGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDL 293
AG VE + ++F R+P KDVVSW T++DG LQ AL M+ G + V
Sbjct: 469 AGDVEKSLDMFRRLPYKDVVSWNTIVDGLLQCGYERHALEQLYCMVECGTEFSAVTFSIA 528
Query: 294 ISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHI 353
+ G Q+H +++K GFD FI+++++ Y CGR++ A + D +
Sbjct: 529 LILASSLSHVELGRQLHGMVLKFGFDSDGFIRSSLVEMYCKCGRMDKASIILRDVPLDVL 588
Query: 354 ASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDA 413
NA ++ K + SW +M+SGY N + L+ F MV
Sbjct: 589 RKGNARVS---------------YKEPKAGIVSWGSMVSGYVWNGKYEDGLKTFRLMVRE 633
Query: 414 GVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTA 473
V + T+ ++ A A++G L+ GR H YV ++ + +++IDMY+K GS++ A
Sbjct: 634 LVVVDIRTVTTIISACANAGILEFGRHVHAYVQKIGHRIDAYVGSSLIDMYSKSGSLDDA 693
Query: 474 FEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCC 533
+ VF + ++ W ++I G A+HG + ++ ++ + I N +TF+GVL+ C
Sbjct: 694 WMVFR--QSNEPNIVMWTSMISGYALHGQGMHAIGLFEEMLNQGIIPNEVTFLGVLNACS 751
Query: 534 HAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIW 593
HAGL++ G RYF+ MK Y + P ++H MVDL GRAG L + I + +W
Sbjct: 752 HAGLIEEGCRYFRMMKDAYCINPGVEHCTSMVDLYGRAGHLTKTKNFIFKNGISHLTSVW 811
Query: 594 GTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDC 653
+ L++ R+H NVE+G+ ++ L + PS + VLLSN+ A RW++A +R M
Sbjct: 812 KSFLSSCRLHKNVEMGKWVSEMLLQVAPSDPGAYVLLSNMCASNHRWDEAARVRSLMHQR 871
Query: 654 GMKRLPGFS 662
G+K+ PG S
Sbjct: 872 GVKKQPGQS 880
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 118/487 (24%), Positives = 227/487 (46%), Gaps = 54/487 (11%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
+ L S L+ CS + G+ +H+ + ++G++ + + NS+++LY KC + A+ +F+
Sbjct: 390 QYTLSSVLKCCSLDNNLQLGKGVHAWMLRNGIDVDVVLGNSILDLYLKCKVFEYAERLFE 449
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+ D V+ NIMI Y+R + + ++F + P K VS+ +++ G Q R ALE
Sbjct: 450 LMNEGDVVSWNIMIGAYLRAGDVEKSLDMFRRLPYKDVVSWNTIVDGLLQCGYERHALEQ 509
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
M G + VT + + + L + R LHG+V+K D I ++L+ MYC
Sbjct: 510 LYCMVECGTEFSAVTFSIALILASSLSHVELGRQLHGMVLKFGFDSDGFIRSSLVEMYCK 569
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
C + +A + + V +V+ G A+ E P +VSWG+M+ GY
Sbjct: 570 CGRMDKASIILRD------VPLDVLRKGNARVSYKE---------PKAGIVSWGSMVSGY 614
Query: 263 LQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD 322
+ + + L +R M+ + + + + +ISAC A G +H+ + K G
Sbjct: 615 VWNGKYEDGLKTFRLMVRELVVVDIRTVTTIISACANAGILEFGRHVHAYVQKIGHRIDA 674
Query: 323 FIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKR 382
++ +++I Y+ G ++ A + F + +I W ++I
Sbjct: 675 YVGSSLIDMYSKSGSLDDAWMVFRQSNEPNIVMWTSMI---------------------- 712
Query: 383 DVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG-RWA 441
SGYA + Q A+ LF M++ G+ PNE+T + V A + +G ++EG R+
Sbjct: 713 ---------SGYALHGQGMHAIGLFEEMLNQGIIPNEVTFLGVLNACSHAGLIEEGCRYF 763
Query: 442 HEYVLNNSITLNDNLS--AAIIDMYAKCGSIN-TAFEVFYHIRDRTTSVSPWNAIICGLA 498
++ ++ +N + +++D+Y + G + T +F + TSV W + +
Sbjct: 764 R--MMKDAYCINPGVEHCTSMVDLYGRAGHLTKTKNFIFKNGISHLTSV--WKSFLSSCR 819
Query: 499 MHGDANL 505
+H + +
Sbjct: 820 LHKNVEM 826
>gi|356531902|ref|XP_003534515.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 1011
Score = 305 bits (780), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 183/615 (29%), Positives = 328/615 (53%), Gaps = 31/615 (5%)
Query: 54 LESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFD 113
L+S + +++ N G + S TL+ + N +++ Y+++ ++ AR++FD
Sbjct: 291 LQSCSLFHSTISNGPPPLGTLHALSVKNGSLQTLN--SANYLLTLYVKSSNMDHARKLFD 348
Query: 114 KTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISS-----SVHL 168
+ P + ++T +I GF++ ++FR+MR G PN+ TL+S+ ++ L
Sbjct: 349 EIPQRNTQTWTILISGFSRAGSSEVVFKLFREMRAKGACPNQYTLSSLFKCCSLDINLQL 408
Query: 169 GGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVML 228
G + +H +++ ID V++ ++L++Y C A +F+ M E ++VSWN+M+
Sbjct: 409 G-----KGVHAWMLRNGIDADVVLGNSILDLYLKCKVFEYAERVFELMNEGDVVSWNIMI 463
Query: 229 NGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDV 288
+ + +AG VE + ++F R+P KDVVSW T++DG +Q +AL M+ G + V
Sbjct: 464 SAYLRAGDVEKSLDMFRRLPYKDVVSWNTIVDGLMQFGYERQALEQLYCMVECGTEFSVV 523
Query: 289 MIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD-FIQATIIHFYAACGRINLARLQFEL 347
+ G Q+H +++K GF C D FI+++++ Y CGR++ A + +
Sbjct: 524 TFSIALILSSSLSLVELGRQLHGMVLKFGF-CRDGFIRSSLVEMYCKCGRMDNASIVLKD 582
Query: 348 GIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELF 407
D + + NA + ++L K + SW M+SGY N + L+ F
Sbjct: 583 VPLDFLKNGNAGVT----------CKEL-----KAGIVSWGLMVSGYVWNGKYEDGLKTF 627
Query: 408 HGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKC 467
MV V + T+ ++ A A++G L+ GR H Y ++ + +++IDMY+K
Sbjct: 628 RLMVRELVVVDIRTVTTIISACANAGILEFGRHVHAYNHKIGHRIDAYVGSSLIDMYSKS 687
Query: 468 GSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIG 527
GS++ A+ +F + ++ W ++I G A+HG + ++ ++ + I N +TF+G
Sbjct: 688 GSLDDAWTIFRQTNE--PNIVFWTSMISGCALHGQGKQAICLFEEMLNQGIIPNEVTFLG 745
Query: 528 VLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMK 587
VL+ CCHAGL++ G RYF+ MK Y + P ++H MVDL GRAG L + + I +
Sbjct: 746 VLNACCHAGLLEEGCRYFRMMKDAYCINPGVEHCTSMVDLYGRAGHLTETKNFIFENGIS 805
Query: 588 ADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIR 647
+W + L++ R+H NVE+G+ ++ L + PS + VLLSN+ A RW++A +R
Sbjct: 806 HLTSVWKSFLSSCRLHKNVEMGKWVSEMLLQVAPSDPGAYVLLSNMCASNHRWDEAARVR 865
Query: 648 KEMRDCGMKRLPGFS 662
M G+K+ PG S
Sbjct: 866 SLMHQRGIKKQPGQS 880
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 122/488 (25%), Positives = 227/488 (46%), Gaps = 56/488 (11%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
+ L S + CS I + G+ +H+ + ++G++++ + NS+++LY KC + A+ +F+
Sbjct: 390 QYTLSSLFKCCSLDINLQLGKGVHAWMLRNGIDADVVLGNSILDLYLKCKVFEYAERVFE 449
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+ D V+ NIMIS Y+R + + ++F + P K VS+ +++ G Q R+ALE
Sbjct: 450 LMNEGDVVSWNIMISAYLRAGDVEKSLDMFRRLPYKDVVSWNTIVDGLMQFGYERQALEQ 509
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMI--DGFVIISTNLLNMY 200
M G + VT + + S L + R LHG+V+K DGF I ++L+ MY
Sbjct: 510 LYCMVECGTEFSVVTFSIALILSSSLSLVELGRQLHGMVLKFGFCRDGF--IRSSLVEMY 567
Query: 201 CVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMID 260
C C + A + + V + + NG A EL +VSWG M+
Sbjct: 568 CKCGRMDNASIVLKD------VPLDFLKNGNAGVTCKEL---------KAGIVSWGLMVS 612
Query: 261 GYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDC 320
GY+ + + L +R M+ + + + + +ISAC A G +H+ K G
Sbjct: 613 GYVWNGKYEDGLKTFRLMVRELVVVDIRTVTTIISACANAGILEFGRHVHAYNHKIGHRI 672
Query: 321 YDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ 380
++ +++I Y+ G ++DA +F
Sbjct: 673 DAYVGSSLIDMYSKSGS-------------------------------LDDAWTIFRQTN 701
Query: 381 KRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRW 440
+ ++ W++MISG A + Q A+ LF M++ G+ PNE+T + V A +G L+EG
Sbjct: 702 EPNIVFWTSMISGCALHGQGKQAICLFEEMLNQGIIPNEVTFLGVLNACCHAGLLEEG-C 760
Query: 441 AHEYVLNNSITLNDNLS--AAIIDMYAKCGSIN-TAFEVFYHIRDRTTSVSPWNAIICGL 497
+ ++ ++ +N + +++D+Y + G + T +F + TSV W + +
Sbjct: 761 RYFRMMKDAYCINPGVEHCTSMVDLYGRAGHLTETKNFIFENGISHLTSV--WKSFLSSC 818
Query: 498 AMHGDANL 505
+H + +
Sbjct: 819 RLHKNVEM 826
>gi|345505220|gb|AEN99834.1| chlororespiratory reduction 4 [Draba nemorosa]
Length = 612
Score = 305 bits (780), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 186/533 (34%), Positives = 288/533 (54%), Gaps = 47/533 (8%)
Query: 137 REALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNL 196
R+AL +F M GV ++ +L+ V+ + LG + E +HG + K I + + L
Sbjct: 103 RKALLLFCLMLETGVSVDKFSLSLVLKACSRLGFVKEGMQIHGFLRKTGIWSDLYLQNCL 162
Query: 197 LNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPS--KDVVS 254
+ +Y C L AR +FD M R+ VS+N M++G+ K G++E AR LF+ +P K+++S
Sbjct: 163 IGLYIKCGCLGYARQVFDRMPRRDSVSYNSMIDGYVKCGMIESARGLFDLMPKEKKNLIS 222
Query: 255 WGTMIDGYLQ-VERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSII 313
W MI GY Q + ++ A ++ M P DLIS
Sbjct: 223 WNFMISGYAQRADGVNVAKKLFDEM------PEK----DLIS------------------ 254
Query: 314 VKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDAR 373
++I Y GR+ A+ F K + +W ++ G+ + G + A+
Sbjct: 255 -----------WNSLIDGYVKHGRMEDAKSLFNKMPKRDVVTWATMVDGYAKLGFVHQAK 303
Query: 374 QLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGM-VDAGVKPNEITMVSVFCAIASS 432
LF+ M RDV ++++MI+GY QN A+ +F+ M ++ + P+E T+V V AIA
Sbjct: 304 SLFDRMPLRDVVAYNSMITGYVQNRYHKEAIGIFNDMEKESHLSPDETTLVIVLSAIAQL 363
Query: 433 GTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNA 492
G L + H Y+++N L L A+ID Y+KCGSI + VF I ++ S+ WNA
Sbjct: 364 GRLSKAVDIHLYIMDNKFRLGGKLGVALIDTYSKCGSIQKSMRVFEEIENK--SIDHWNA 421
Query: 493 IICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVY 552
+I GLA+HG + +EKR+IK + ITFIGVL+ C H+GLV G F+ M+ +
Sbjct: 422 MIGGLAIHGLGESAFDMLLQIEKRSIKPDDITFIGVLNACSHSGLVKEGLLCFELMRRKH 481
Query: 553 NVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERA 612
+EP L+HYGCMVD+L R+G +E A+ +I MP++ + VIW T L A H E GE
Sbjct: 482 KIEPKLQHYGCMVDILSRSGSIELAKNLIEEMPIEPNDVIWRTFLTACSNHKEFETGELV 541
Query: 613 AKSLAGLQPSHGPSR-VLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
AK L LQ + PS VLLSN+YA G W++ +R M++ ++++PG S +
Sbjct: 542 AKHLF-LQGGYNPSSFVLLSNMYASFGMWKEVRRVRTTMKERKLRKIPGCSWI 593
Score = 175 bits (443), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 129/457 (28%), Positives = 216/457 (47%), Gaps = 77/457 (16%)
Query: 22 YELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMF 81
+ L+LV L+ CS V +G QIH + K+G+ S+ ++QN LI LY KCG + A+ +F
Sbjct: 122 FSLSLV--LKACSRLGFVKEGMQIHGFLRKTGIWSDLYLQNCLIGLYIKCGCLGYARQVF 179
Query: 82 DSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTP--IKCCVSYTSMIMGFAQN-DCWRE 138
D D V+ N MI GY++ + AR +FD P K +S+ MI G+AQ D
Sbjct: 180 DRMPRRDSVSYNSMIDGYVKCGMIESARGLFDLMPKEKKNLISWNFMISGYAQRADGVNV 239
Query: 139 ALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLN 198
A ++F +M P + ++ W +IDG+V
Sbjct: 240 AKKLFDEM------PEKDLIS------------WNS----------LIDGYV-------- 263
Query: 199 MYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTM 258
+ +A+SLF++M +R++V+W M++G+AK G V A+ LF+R+P +DVV++ +M
Sbjct: 264 ---KHGRMEDAKSLFNKMPKRDVVTWATMVDGYAKLGFVHQAKSLFDRMPLRDVVAYNSM 320
Query: 259 IDGYLQVERLSEALTMYRAMLCDG-IAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAG 317
I GY+Q EA+ ++ M + ++P++ +V ++SA + + + IH I+
Sbjct: 321 ITGYVQNRYHKEAIGIFNDMEKESHLSPDETTLVIVLSAIAQLGRLSKAVDIHLYIMDNK 380
Query: 318 FDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFN 377
F + +I Y+ CG I + FE I WNA+I G +G+ E A +
Sbjct: 381 FRLGGKLGVALIDTYSKCGSIQKSMRVFEEIENKSIDHWNAMIGGLAIHGLGESAFDMLL 440
Query: 378 NMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKE 437
++KR +KP++IT + V A + SG +KE
Sbjct: 441 QIEKR-------------------------------SIKPDDITFIGVLNACSHSGLVKE 469
Query: 438 GRWAHEYV-LNNSITLNDNLSAAIIDMYAKCGSINTA 473
G E + + I ++D+ ++ GSI A
Sbjct: 470 GLLCFELMRRKHKIEPKLQHYGCMVDILSRSGSIELA 506
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 106/404 (26%), Positives = 190/404 (47%), Gaps = 37/404 (9%)
Query: 233 KAGLVELARELFERI------PSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPN 286
++ L E AR +F +D W +I + +AL ++ ML G++ +
Sbjct: 61 RSYLAEFARFVFHEYHVCSNGDFEDPFLWNAVIKSHSHGLDPRKALLLFCLMLETGVSVD 120
Query: 287 DVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFE 346
+ ++ AC R EG+QIH + K G ++Q +I Y CG + AR F+
Sbjct: 121 KFSLSLVLKACSRLGFVKEGMQIHGFLRKTGIWSDLYLQNCLIGLYIKCGCLGYARQVFD 180
Query: 347 LGIKDHIASWNALIAGFIRNGMIEDARQLFNNM--QKRDVYSWSAMISGYAQN-EQPNMA 403
+ S+N++I G+++ GMIE AR LF+ M +K+++ SW+ MISGYAQ + N+A
Sbjct: 181 RMPRRDSVSYNSMIDGYVKCGMIESARGLFDLMPKEKKNLISWNFMISGYAQRADGVNVA 240
Query: 404 LELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLS-AAIID 462
+LF M + + I+ S+ G +K GR L N + D ++ A ++D
Sbjct: 241 KKLFDEMPEKDL----ISWNSLI-----DGYVKHGRMEDAKSLFNKMPKRDVVTWATMVD 291
Query: 463 MYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKR-NIKLN 521
YAK G ++ A +F + R V +N++I G + + I++D+EK ++ +
Sbjct: 292 GYAKLGFVHQAKSLFDRMPLR--DVVAYNSMITGYVQNRYHKEAIGIFNDMEKESHLSPD 349
Query: 522 SITFIGVLSTCCHAGLVDLGERYFKSMK-SVYNVEPDLKHYG----CMVDLLGRAGQLED 576
T + VLS G R K++ +Y ++ + G ++D + G ++
Sbjct: 350 ETTLVIVLSAIAQLG------RLSKAVDIHLYIMDNKFRLGGKLGVALIDTYSKCGSIQK 403
Query: 577 AEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQ 620
+ V + K+ + W ++ IHG +GE A L ++
Sbjct: 404 SMRVFEEIENKS-IDHWNAMIGGLAIHG---LGESAFDMLLQIE 443
>gi|359479098|ref|XP_002274209.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
chloroplastic-like [Vitis vinifera]
Length = 518
Score = 305 bits (780), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 162/423 (38%), Positives = 251/423 (59%), Gaps = 11/423 (2%)
Query: 248 PSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACG----RAMAF 303
P +VSW + I + + +L EA + M G+ PN + + L+SAC + F
Sbjct: 50 PIDPIVSWTSSIALHCRNGQLPEAAAEFSRMQIAGVRPNHITFLTLLSACTDFPLEGLRF 109
Query: 304 GEGLQIHSIIVKAGFDCYDFIQAT-IIHFYAACGRINLARLQF-ELGIKDHIASWNALIA 361
G IH+ + K G D + + T ++ Y+ CG+++LA L F E+ +++ + SWN +I
Sbjct: 110 GG--SIHAYVRKLGLDTENVMVGTALVDMYSKCGQLDLAWLMFDEMHVRNSV-SWNTMID 166
Query: 362 GFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEIT 421
G +RNG + +A LF+ M +RD SW++MI G+ + ALE F M AGV+P+ +T
Sbjct: 167 GCMRNGEVGEAIVLFDQMSERDAISWTSMIGGFVKKGCFEQALEWFREMQLAGVEPDYVT 226
Query: 422 MVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIR 481
++SV A A+ G L G W + +V+ N +S ++IDMY++CG I A +VF +
Sbjct: 227 IISVLAACANLGALGLGLWINRFVMKQDFKDNIKISNSLIDMYSRCGCIRLARQVFEQMP 286
Query: 482 DRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLG 541
R S+ WN++I G A++G A L+ ++ + K + + ++F G L+ C H+GLVD G
Sbjct: 287 KR--SLVSWNSMIVGFALNGHAEEALEFFNLMRKEGFRPDGVSFTGALTACSHSGLVDEG 344
Query: 542 ERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASR 601
++F MK + P ++HYGC+VDL RAG+LEDA VI +MPMK + V+ G+LLAA R
Sbjct: 345 LQFFDIMKRTRKISPRIEHYGCLVDLYSRAGRLEDALNVIANMPMKPNEVVLGSLLAACR 404
Query: 602 IHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGF 661
HG+V + ER K L + P + VLLSNIYA GRW+ A +RK+M+ G+ + PGF
Sbjct: 405 THGDVGLAERLMKYLCEVDPGSDSNYVLLSNIYAAVGRWDGASKVRKKMKALGIHKKPGF 464
Query: 662 SGV 664
S +
Sbjct: 465 SSI 467
Score = 171 bits (434), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 117/400 (29%), Positives = 193/400 (48%), Gaps = 38/400 (9%)
Query: 115 TPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVIS--SSVHLGGIW 172
+PI VS+TS I +N EA F M+I GV PN +T +++S + L G+
Sbjct: 49 SPIDPIVSWTSSIALHCRNGQLPEAAAEFSRMQIAGVRPNHITFLTLLSACTDFPLEGLR 108
Query: 173 ECRMLHGLVIKLMIDGF-VIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGF 231
+H V KL +D V++ T L++MY C L A +FDEM RN VSWN M++G
Sbjct: 109 FGGSIHAYVRKLGLDTENVMVGTALVDMYSKCGQLDLAWLMFDEMHVRNSVSWNTMIDGC 168
Query: 232 AKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIV 291
+ G V A LF+++ +D +SW +MI G+++ +AL +R M G+ P+ V I+
Sbjct: 169 MRNGEVGEAIVLFDQMSERDAISWTSMIGGFVKKGCFEQALEWFREMQLAGVEPDYVTII 228
Query: 292 DLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKD 351
+++AC A G GL I+ ++K F I ++I Y+ CG I LAR FE K
Sbjct: 229 SVLAACANLGALGLGLWINRFVMKQDFKDNIKISNSLIDMYSRCGCIRLARQVFEQMPKR 288
Query: 352 HIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMV 411
+ SWN++I GF NG E+A + FN M+K
Sbjct: 289 SLVSWNSMIVGFALNGHAEEALEFFNLMRKE----------------------------- 319
Query: 412 DAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLS--AAIIDMYAKCGS 469
G +P+ ++ A + SG + EG + ++ + ++ + ++D+Y++ G
Sbjct: 320 --GFRPDGVSFTGALTACSHSGLVDEGLQFFD-IMKRTRKISPRIEHYGCLVDLYSRAGR 376
Query: 470 INTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKI 509
+ A V ++ + V +++ HGD L ++
Sbjct: 377 LEDALNVIANMPMKPNEVV-LGSLLAACRTHGDVGLAERL 415
Score = 145 bits (365), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 106/403 (26%), Positives = 184/403 (45%), Gaps = 73/403 (18%)
Query: 42 GQQIHSLIFKSGLES-NTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYI 100
G IH+ + K GL++ N + +L+++Y+KCG + A MFD + V+ N MI G +
Sbjct: 110 GGSIHAYVRKLGLDTENVMVGTALVDMYSKCGQLDLAWLMFDEMHVRNSVSWNTMIDGCM 169
Query: 101 RNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLAS 160
RN + +A +FD+ + +S+TSMI GF + C+ +ALE FR+M++ GV P+ VT+ S
Sbjct: 170 RNGEVGEAIVLFDQMSERDAISWTSMIGGFVKKGCFEQALEWFREMQLAGVEPDYVTIIS 229
Query: 161 VISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERN 220
V+++ +LG + ++ V+K + IS +L++MY C
Sbjct: 230 VLAACANLGALGLGLWINRFVMKQDFKDNIKISNSLIDMYSRC----------------- 272
Query: 221 IVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLC 280
G + LAR++FE++P + +VSW +MI G+ EAL + M
Sbjct: 273 --------------GCIRLARQVFEQMPKRSLVSWNSMIVGFALNGHAEEALEFFNLMRK 318
Query: 281 DGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINL 340
+G P+ V ++AC HS +V G +D ++ T
Sbjct: 319 EGFRPDGVSFTGALTACS-----------HSGLVDEGLQFFDIMKRT------------- 354
Query: 341 ARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ-KRDVYSWSAMISGYAQNEQ 399
I I + L+ + R G +EDA + NM K + ++++ +
Sbjct: 355 ------RKISPRIEHYGCLVDLYSRAGRLEDALNVIANMPMKPNEVVLGSLLAACRTHGD 408
Query: 400 PNMALELFHGM--VDAGVKPNEITMVSVFCAIASSGTLKEGRW 440
+A L + VD G N + + +++ A+ GRW
Sbjct: 409 VGLAERLMKYLCEVDPGSDSNYVLLSNIYAAV--------GRW 443
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 117/319 (36%), Gaps = 101/319 (31%)
Query: 21 DYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSM 80
DY + ++S L C+ A+ G I+ + K + N I NSLI++Y++CG I A+ +
Sbjct: 223 DY-VTIISVLAACANLGALGLGLWINRFVMKQDFKDNIKISNSLIDMYSRCGCIRLARQV 281
Query: 81 FDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREAL 140
F+ V+ N MI +GFA N EAL
Sbjct: 282 FEQMPKRSLVSWNSMI-------------------------------VGFALNGHAEEAL 310
Query: 141 EVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMY 200
E F MR G P+ V+ +++ H G ++D
Sbjct: 311 EFFNLMRKEGFRPDGVSFTGALTACSHSG---------------LVD------------- 342
Query: 201 CVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMID 260
E FD MK R++ RI +G ++D
Sbjct: 343 -------EGLQFFDIMKR---------------------TRKISPRIE-----HYGCLVD 369
Query: 261 GYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRA--MAFGEGLQIHSIIVKAGF 318
Y + RL +AL + M + PN+V++ L++AC + E L + V G
Sbjct: 370 LYSRAGRLEDALNVIANM---PMKPNEVVLGSLLAACRTHGDVGLAERLMKYLCEVDPGS 426
Query: 319 DCYDFIQATIIHFYAACGR 337
D + + I YAA GR
Sbjct: 427 DSNYVLLSNI---YAAVGR 442
>gi|357475445|ref|XP_003608008.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355509063|gb|AES90205.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1183
Score = 304 bits (779), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 193/625 (30%), Positives = 306/625 (48%), Gaps = 98/625 (15%)
Query: 39 VSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISG 98
V + +++H + K G SNT + NSLI Y K G + A ++FD S D V+ N MI+G
Sbjct: 486 VKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMING 545
Query: 99 YIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTL 158
+ N GF+ N LE+F M ILGV + TL
Sbjct: 546 CVVN--------------------------GFSGN-----GLEIFIQMLILGVEVDLTTL 574
Query: 159 ASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKE 218
SV+ + ++G + R LHG +K V+ S LL+MY C +L A +F +M +
Sbjct: 575 VSVLVAWANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGD 634
Query: 219 RNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAM 278
IVSW + + + GL A LF+ + SK
Sbjct: 635 TTIVSWTSTIAAYVREGLYSDAIGLFDEMQSK---------------------------- 666
Query: 279 LCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRI 338
G+ P+ + ++ AC + + +G +HS ++K G + +I+ YA CG +
Sbjct: 667 ---GVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSV 723
Query: 339 NLARLQF-ELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQN 397
ARL F ++ +KD I SWN +I G+ +N + +A +LF +MQK+
Sbjct: 724 EEARLVFSKIPVKD-IVSWNTMIGGYSQNSLPNEALELFLDMQKQ--------------- 767
Query: 398 EQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLS 457
KP++ITM V A A L +GR H ++L + +++
Sbjct: 768 -----------------FKPDDITMACVLPACAGLAALDKGREIHGHILRRGYFSDLHVA 810
Query: 458 AAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRN 517
A++DMYAKCG + A +F I + + W +I G MHG N + ++++
Sbjct: 811 CALVDMYAKCGLLVLAQLLFDMIPKK--DLISWTVMIAGYGMHGFGNEAISTFNEMRIAG 868
Query: 518 IKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDA 577
I+ + +F +L+ C H+GL++ G ++F SM++ VEP L+HY C+VDLL R G L A
Sbjct: 869 IEPDESSFSVILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYACVVDLLARMGNLSKA 928
Query: 578 EEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADA 637
+ I SMP+K D IWG LL+ RIH +V++ E+ A+ + L+P + V+L+N+YA+A
Sbjct: 929 YKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHIFELEPDNTRYYVVLANVYAEA 988
Query: 638 GRWEDAFSIRKEMRDCGMKRLPGFS 662
+WE+ +RK M+ G K+ PG S
Sbjct: 989 EKWEEVKKLRKRMQKRGFKQNPGCS 1013
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 129/308 (41%), Gaps = 37/308 (12%)
Query: 293 LISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDH 352
++ C + +G ++HS+I+ G + + A ++ Y CG + R F+ + D
Sbjct: 375 VLQLCAEKKSLEDGKRVHSVIISNGISIDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDK 434
Query: 353 IASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVD 412
+ WN L++ + + G ++ LF MQK
Sbjct: 435 VFLWNLLMSEYAKIGNFRESVSLFKKMQK------------------------------- 463
Query: 413 AGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINT 472
GV N T V A+ G +KE + H YVL N + ++I Y K G + +
Sbjct: 464 LGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVES 523
Query: 473 AFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTC 532
A +F + + V WN++I G ++G + L+I+ + ++++ T + VL
Sbjct: 524 AHNLFDELSE--PDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVAW 581
Query: 533 CHAGLVDLGERYFK-SMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVV 591
+ G + LG +K+ ++ E + ++D+ + G L A EV M +V
Sbjct: 582 ANIGNLSLGRALHGFGVKACFSEE--VVFSNTLLDMYSKCGNLNGATEVFVKMG-DTTIV 638
Query: 592 IWGTLLAA 599
W + +AA
Sbjct: 639 SWTSTIAA 646
>gi|119638439|gb|ABL85030.1| hypothetical protein 57h21.3 [Brachypodium sylvaticum]
Length = 618
Score = 304 bits (779), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 179/597 (29%), Positives = 313/597 (52%), Gaps = 70/597 (11%)
Query: 81 FDSCSTLDPVACNIMISGYIRND-----------RLNDAREVFDKTPIKCCVSYTSMIMG 129
+DS + +D +SG++++ R++DAR +FD+TP + VS+T+++
Sbjct: 23 YDSAAAVD-------VSGHVQDPNRRVAELAAAGRVSDARRLFDRTPDRDVVSWTALVAA 75
Query: 130 FAQNDCWREALEVFR--DMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMID 187
+A+ +A +F D R N VT +++S G + E L + M +
Sbjct: 76 YARQGMLHDARALFDRPDAR-----RNVVTWTALLSGYARAGRVDEAEAL----FQRMPE 126
Query: 188 GFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERI 247
V+ +L Y + +A +LFD M R+ SWN++L ++G ++ AR+LF+R+
Sbjct: 127 RNVVSWNTMLEAYTSAGRVRDAWTLFDGMPVRDAGSWNILLAALVRSGNMDKARKLFDRM 186
Query: 248 PSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGL 307
P ++V++W TM+ G + + EA ++ DG+ +V+ +
Sbjct: 187 PERNVMAWTTMVAGIARSGSVDEARALF-----DGMPERNVVSWN--------------- 226
Query: 308 QIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNG 367
+I YA RI+ A F IASWN +I GFI++
Sbjct: 227 -------------------AMISGYARNHRIDEAHDLFMKMPTRDIASWNIMITGFIQDR 267
Query: 368 MIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFC 427
+E A+ LF+ M +R+V +W+ M++GY Q+ Q AL++F+GM+ G++PN++T +
Sbjct: 268 DLERAQDLFDKMPRRNVITWTTMMNGYLQSMQSETALQIFNGMLVEGIRPNQVTFLGAVD 327
Query: 428 AIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSV 487
A ++ L EG+ H+ + S + + + ++++YAKCG I A +VF +++ V
Sbjct: 328 ACSNLAGLSEGQQVHQMICKTSFQFDTFIESTLMNLYAKCGEIRLARKVFDLSKEK--DV 385
Query: 488 SPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKS 547
WN +I A HG + +Y ++++ K N +T++G+LS C H+GLVD G R F+
Sbjct: 386 ISWNGMIAAYAHHGVGVEAIHLYEKMQEKGYKPNDVTYVGLLSACSHSGLVDEGLRIFEY 445
Query: 548 MKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVE 607
M ++ +HY C++DL RAG+L DA+ +I + ++ +W LL HGN
Sbjct: 446 MVKDRSIAVRDEHYTCLIDLCSRAGRLGDAKRLIHFLKVEPSSTVWNALLGGCNSHGNES 505
Query: 608 VGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
+G+ AA++L +P++ + LL NIYA AG+W++A IR EM D G+K+ PG S +
Sbjct: 506 IGDLAARNLLEAEPNNAGTYTLLCNIYASAGKWKEAAKIRSEMNDRGLKKQPGCSWI 562
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 133/487 (27%), Positives = 230/487 (47%), Gaps = 77/487 (15%)
Query: 49 IFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDA 108
+F+ E N N+++ Y G + A ++FD D + NI+++ +R+ ++ A
Sbjct: 120 LFQRMPERNVVSWNTMLEAYTSAGRVRDAWTLFDGMPVRDAGSWNILLAALVRSGNMDKA 179
Query: 109 REVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHL 168
R++FD+ P + +++T+M+ G A++ EA +F M V+
Sbjct: 180 RKLFDRMPERNVMAWTTMVAGIARSGSVDEARALFDGMPERNVVS--------------- 224
Query: 169 GGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVML 228
W MI G Y + EA LF +M R+I SWN+M+
Sbjct: 225 ---WNA----------MISG-----------YARNHRIDEAHDLFMKMPTRDIASWNIMI 260
Query: 229 NGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDV 288
GF + +E A++LF+++P ++V++W TM++GYLQ + AL ++ ML +GI PN V
Sbjct: 261 TGFIQDRDLERAQDLFDKMPRRNVITWTTMMNGYLQSMQSETALQIFNGMLVEGIRPNQV 320
Query: 289 MIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELG 348
+ + AC EG Q+H +I K F FI++T+++ YA CG I LAR F+L
Sbjct: 321 TFLGAVDACSNLAGLSEGQQVHQMICKTSFQFDTFIESTLMNLYAKCGEIRLARKVFDLS 380
Query: 349 IKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFH 408
+ + SWN +IA + +G+ +A L+ MQ++
Sbjct: 381 KEKDVISWNGMIAAYAHHGVGVEAIHLYEKMQEK-------------------------- 414
Query: 409 GMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEY-VLNNSITLNDNLSAAIIDMYAKC 467
G KPN++T V + A + SG + EG EY V + SI + D +ID+ ++
Sbjct: 415 -----GYKPNDVTYVGLLSACSHSGLVDEGLRIFEYMVKDRSIAVRDEHYTCLIDLCSRA 469
Query: 468 GSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIG 527
G + A + + ++ +S + WNA++ G HG+ ++ DL RN+ G
Sbjct: 470 GRLGDAKRLIHFLKVEPSS-TVWNALLGGCNSHGNESI-----GDLAARNLLEAEPNNAG 523
Query: 528 VLSTCCH 534
+ C+
Sbjct: 524 TYTLLCN 530
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 104/233 (44%), Gaps = 37/233 (15%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
++ + A+ CS +S+GQQ+H +I K+ + +TFI+++L+NLYAKCG I A+ +FD
Sbjct: 319 QVTFLGAVDACSNLAGLSEGQQVHQMICKTSFQFDTFIESTLMNLYAKCGEIRLARKVFD 378
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
D +S+ MI +A + EA+ +
Sbjct: 379 LSKEKD-------------------------------VISWNGMIAAYAHHGVGVEAIHL 407
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWE-CRMLHGLVIKLMIDGFVIISTNLLNMYC 201
+ M+ G PN+VT ++S+ H G + E R+ +V I T L+++
Sbjct: 408 YEKMQEKGYKPNDVTYVGLLSACSHSGLVDEGLRIFEYMVKDRSIAVRDEHYTCLIDLCS 467
Query: 202 VCSSLVEARSLFDEMK-ERNIVSWNVMLNGFAKAGLVEL----ARELFERIPS 249
L +A+ L +K E + WN +L G G + AR L E P+
Sbjct: 468 RAGRLGDAKRLIHFLKVEPSSTVWNALLGGCNSHGNESIGDLAARNLLEAEPN 520
>gi|125587880|gb|EAZ28544.1| hypothetical protein OsJ_12524 [Oryza sativa Japonica Group]
Length = 559
Score = 304 bits (779), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 161/436 (36%), Positives = 252/436 (57%), Gaps = 6/436 (1%)
Query: 225 NVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIA 284
N ++ + AG VE A +F P+ D VS M+ GY++ +AL +R M GI
Sbjct: 50 NSLIKMYLDAGDVEAAEAMFRCAPTADAVSCNIMLSGYVKGGCSGKALRFFRGMASRGIG 109
Query: 285 PNDVMIVDLISACGRAMAFGEGLQIHSIIVK--AGFDCYDFIQATIIHFYAACGRINLAR 342
+ V L++ CGR G +H ++V+ D + ++ YA CG +N A
Sbjct: 110 VDQYTAVALLACCGRLKKAVLGRSVHGVVVRRIGVADRGLILSNALLDMYAKCGEMNTAM 169
Query: 343 LQF-ELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPN 401
F E G +D I SWN ++AGF G+++ A + F RD+ SW+A+++GYA+ E+ +
Sbjct: 170 RVFDEAGERDGI-SWNTMVAGFANAGLLDLASKYFGEAPARDIISWNALLAGYARYEEFS 228
Query: 402 MALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAII 461
+ LFH M+ + V P+++T V++ A+A GTL R H +V+ T + L++A++
Sbjct: 229 ATMILFHDMLASSVIPDKVTAVTLISAVAGKGTLNSARSVHGWVVKEHGTQDSFLASALV 288
Query: 462 DMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLN 521
DMY KCGSI A+ VF D+ V+ W A+I GLA HG ++ L ++ ++ + N
Sbjct: 289 DMYCKCGSIKLAYAVFEKAVDK--DVTLWTAMISGLAFHGHGDVALDLFWKMQAEGTEPN 346
Query: 522 SITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVI 581
+T + VLS C HAGL D G + F ++K +N+EP ++H+GCMVDLL R+G+L DA ++
Sbjct: 347 GVTLVAVLSACSHAGLFDEGCKIFDTLKQRFNIEPGVEHFGCMVDLLARSGRLSDAVDLA 406
Query: 582 RSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWE 641
R MPMK IWG++L+AS N EV E A+K L L+P+ VLLSN+YA G+W
Sbjct: 407 RRMPMKPSRSIWGSILSASSACQNTEVAEIASKELLCLEPAEEGGYVLLSNMYAAEGQWN 466
Query: 642 DAFSIRKEMRDCGMKR 657
+ +R+ M G+++
Sbjct: 467 YSNEVRENMERKGVRK 482
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 123/459 (26%), Positives = 210/459 (45%), Gaps = 68/459 (14%)
Query: 40 SQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGY 99
S G+Q+H+ + +GL S +++NSLI +Y G + A++MF T D V+CNIM+SG
Sbjct: 28 SVGKQVHAHVVVTGLHSRVYLRNSLIKMYLDAGDVEAAEAMFRCAPTADAVSCNIMLSG- 86
Query: 100 IRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLA 159
+ + C +AL FR M G+ ++ T
Sbjct: 87 ------------------------------YVKGGCSGKALRFFRGMASRGIGVDQYTAV 116
Query: 160 SVISSSVHLGGIWECRMLHGLVIKLM--IDGFVIISTNLLNMYCVCSSLVEARSLFDEMK 217
++++ L R +HG+V++ + D +I+S LL+MY C + A +FDE
Sbjct: 117 ALLACCGRLKKAVLGRSVHGVVVRRIGVADRGLILSNALLDMYAKCGEMNTAMRVFDEAG 176
Query: 218 ERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRA 277
ER+ +SWN M+ GFA AGL++LA + F P++D++SW ++ GY + E S + ++
Sbjct: 177 ERDGISWNTMVAGFANAGLLDLASKYFGEAPARDIISWNALLAGYARYEEFSATMILFHD 236
Query: 278 MLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGR 337
ML + P+ V V LISA +H +VK F+ + ++ Y CG
Sbjct: 237 MLASSVIPDKVTAVTLISAVAGKGTLNSARSVHGWVVKEHGTQDSFLASALVDMYCKCGS 296
Query: 338 INLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQN 397
I LA FE + + W A+I+G +G
Sbjct: 297 IKLAYAVFEKAVDKDVTLWTAMISGLAFHG------------------------------ 326
Query: 398 EQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLS 457
++AL+LF M G +PN +T+V+V A + +G EG + L + +
Sbjct: 327 -HGDVALDLFWKMQAEGTEPNGVTLVAVLSACSHAGLFDEGCKIFD-TLKQRFNIEPGVE 384
Query: 458 --AAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAII 494
++D+ A+ G ++ A ++ + + S S W +I+
Sbjct: 385 HFGCMVDLLARSGRLSDAVDLARRMPMK-PSRSIWGSIL 422
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 95/402 (23%), Positives = 190/402 (47%), Gaps = 49/402 (12%)
Query: 42 GQQIHSLIFKS-GLESNTFI-QNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGY 99
G+ +H ++ + G+ I N+L+++YAKCG ++ A +FD D ++ N M++G+
Sbjct: 131 GRSVHGVVVRRIGVADRGLILSNALLDMYAKCGEMNTAMRVFDEAGERDGISWNTMVAGF 190
Query: 100 IRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLA 159
L+ A + F + P + +S+ +++ G+A+ + + + +F DM VIP++VT
Sbjct: 191 ANAGLLDLASKYFGEAPARDIISWNALLAGYARYEEFSATMILFHDMLASSVIPDKVTAV 250
Query: 160 SVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKER 219
++IS+ G + R +HG V+K +++ L++MYC C S+ A ++F++ ++
Sbjct: 251 TLISAVAGKGTLNSARSVHGWVVKEHGTQDSFLASALVDMYCKCGSIKLAYAVFEKAVDK 310
Query: 220 NIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAML 279
++ W M++G A G ++A +LF W M
Sbjct: 311 DVTLWTAMISGLAFHGHGDVALDLF----------W---------------------KMQ 339
Query: 280 CDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQ--ATIIHFYAACGR 337
+G PN V +V ++SAC A F EG +I + K F+ ++ ++ A GR
Sbjct: 340 AEGTEPNGVTLVAVLSACSHAGLFDEGCKIFDTL-KQRFNIEPGVEHFGCMVDLLARSGR 398
Query: 338 INLA-RLQFELGIKDHIASWNALIAGFI---RNGMIEDARQLFNNMQKRDVYSWSAMISG 393
++ A L + +K + W ++++ + E A + ++ + + + +
Sbjct: 399 LSDAVDLARRMPMKPSRSIWGSILSASSACQNTEVAEIASKELLCLEPAEEGGYVLLSNM 458
Query: 394 YAQNEQPNMALELFHGMVDAGVKPN---------EITMVSVF 426
YA Q N + E+ M GV+ + E++MV+ F
Sbjct: 459 YAAEGQWNYSNEVRENMERKGVRKSADTETAKYKELSMVTNF 500
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 132/304 (43%), Gaps = 57/304 (18%)
Query: 348 GIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELF 407
G+ + N+LI ++ G +E A +F D S + M+SGY + AL F
Sbjct: 41 GLHSRVYLRNSLIKMYLDAGDVEAAEAMFRCAPTADAVSCNIMLSGYVKGGCSGKALRFF 100
Query: 408 HGMVDAGVKPNEITMVSVFCAIASSGTLKE---GRWAHEYVLNNSITLNDN---LSAAII 461
GM G+ ++ T V++ +A G LK+ GR H V+ I + D LS A++
Sbjct: 101 RGMASRGIGVDQYTAVAL---LACCGRLKKAVLGRSVHGVVVRR-IGVADRGLILSNALL 156
Query: 462 DMYAKCGSINTAFEVFYHIRDR-----------------------------TTSVSPWNA 492
DMYAKCG +NTA VF +R + WNA
Sbjct: 157 DMYAKCGEMNTAMRVFDEAGERDGISWNTMVAGFANAGLLDLASKYFGEAPARDIISWNA 216
Query: 493 IICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVY 552
++ G A + + + T+ ++ D+ ++ + +T + ++S G ++ S +SV+
Sbjct: 217 LLAGYARYEEFSATMILFHDMLASSVIPDKVTAVTLISAVAGKGTLN-------SARSVH 269
Query: 553 NVEPDLKHYG--------CMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHG 604
+K +G +VD+ + G ++ A V + DV +W +++ HG
Sbjct: 270 GWV--VKEHGTQDSFLASALVDMYCKCGSIKLAYAVFEK-AVDKDVTLWTAMISGLAFHG 326
Query: 605 NVEV 608
+ +V
Sbjct: 327 HGDV 330
>gi|147806113|emb|CAN65480.1| hypothetical protein VITISV_030746 [Vitis vinifera]
Length = 686
Score = 304 bits (779), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 174/486 (35%), Positives = 249/486 (51%), Gaps = 65/486 (13%)
Query: 240 ARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGR 299
AR+LF++IP ++ W +M GY Q E E + ++ M I PN ++ +CG+
Sbjct: 152 ARQLFDQIPDPNIALWNSMFRGYAQSESYREVVFLFFQMKGMDIRPNCFTFPVVLKSCGK 211
Query: 300 AMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRIN-------------------- 339
A EG Q+H ++K GF F+ T+I Y+A G +
Sbjct: 212 INALIEGEQVHCFLIKCGFRGNPFVGTTLIDMYSAGGTVGDAYKIFCEMFERNVVAWTSM 271
Query: 340 -----------LARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDV---- 384
AR F+L + + WN +++G+I G + +AR+LF M RDV
Sbjct: 272 INGYILSADLVSARRLFDLAPERDVVLWNIMVSGYIEGGDMVEARKLFXEMPNRDVMFWN 331
Query: 385 ---------------------------YSWSAMISGYAQNEQPNMALELFHGMV-DAGVK 416
+SW+A+I GYA N L F M+ ++ V
Sbjct: 332 TVLKGYATNGNVEALEGLFEEMPERNIFSWNALIGGYAHNGLFFEVLGSFKRMLSESDVP 391
Query: 417 PNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEV 476
PN+ T+V+V A A G L G+W H Y ++ + N + A++DMYAKCG I A V
Sbjct: 392 PNDATLVTVLSACARLGALDLGKWVHVYAESSGLKGNVYVGNALMDMYAKCGIIENAISV 451
Query: 477 FYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAG 536
F + T + WN +I GLAMH L ++ ++ K + ITFIG+L C H G
Sbjct: 452 FRGMD--TKDLISWNTLIGGLAMHSRGADALNLFFQMKNAGQKPDGITFIGILCACTHMG 509
Query: 537 LVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTL 596
LV+ G YF+SM Y + P ++HYGCMVD+L RAG+LE A +R MP++AD VIW L
Sbjct: 510 LVEDGFAYFQSMADDYLIMPQIEHYGCMVDMLARAGRLEQAXAFVRKMPVEADGVIWAGL 569
Query: 597 LAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMK 656
L A RI+ NVE+ E A + L L+P + + V+LSNIY DAGRWED ++ MRD G K
Sbjct: 570 LGACRIYKNVELAELALQRLIELEPKNPANYVMLSNIYGDAGRWEDVARLKVAMRDTGFK 629
Query: 657 RLPGFS 662
+LPG S
Sbjct: 630 KLPGCS 635
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 131/521 (25%), Positives = 230/521 (44%), Gaps = 82/521 (15%)
Query: 40 SQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGY 99
Q QI + I +G + N +I L+ + C+TL
Sbjct: 115 KQVHQIQAQIIANGFQYNEYITPKLVTI----------------CATLK----------- 147
Query: 100 IRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLA 159
R+ AR++FD+ P + SM G+AQ++ +RE + +F M+ + + PN T
Sbjct: 148 ----RMTYARQLFDQIPDPNIALWNSMFRGYAQSESYREVVFLFFQMKGMDIRPNCFTFP 203
Query: 160 SVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKER 219
V+ S + + E +H +IK G + T L++MY ++ +A +F EM ER
Sbjct: 204 VVLKSCGKINALIEGEQVHCFLIKCGFRGNPFVGTTLIDMYSAGGTVGDAYKIFCEMFER 263
Query: 220 NIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAML 279
N+V+W M+NG+ + + AR LF+ P +DVV W M+ GY++ + EA ++ M
Sbjct: 264 NVVAWTSMINGYILSADLVSARRLFDLAPERDVVLWNIMVSGYIEGGDMVEARKLFXEM- 322
Query: 280 CDGIAPN-DVMIVDLI----SACGRAMAFGEGL-------QIHSIIVKAGFDCYDFI--- 324
PN DVM + + + G A EGL I S G ++ +
Sbjct: 323 -----PNRDVMFWNTVLKGYATNGNVEAL-EGLFEEMPERNIFSWNALIGGYAHNGLFFE 376
Query: 325 -----------------QATIIHFYAACGRINLARLQFEL-------GIKDHIASWNALI 360
AT++ +AC R+ L + G+K ++ NAL+
Sbjct: 377 VLGSFKRMLSESDVPPNDATLVTVLSACARLGALDLGKWVHVYAESSGLKGNVYVGNALM 436
Query: 361 AGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEI 420
+ + G+IE+A +F M +D+ SW+ +I G A + + AL LF M +AG KP+ I
Sbjct: 437 DMYAKCGIIENAISVFRGMDTKDLISWNTLIGGLAMHSRGADALNLFFQMKNAGQKPDGI 496
Query: 421 TMVSVFCAIASSGTLKEGRWAHEYVLNNSITLND-NLSAAIIDMYAKCGSINTAFEVFYH 479
T + + CA G +++G + + ++ + + ++DM A+ G + A
Sbjct: 497 TFIGILCACTHMGLVEDGFAYFQSMADDYLIMPQIEHYGCMVDMLARAGRLEQAXAFVRK 556
Query: 480 IRDRTTSVSPWNAIICGLAMHGD---ANLTLKIYSDLEKRN 517
+ V W ++ ++ + A L L+ +LE +N
Sbjct: 557 MPVEADGVI-WAGLLGACRIYKNVELAELALQRLIELEPKN 596
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/303 (21%), Positives = 112/303 (36%), Gaps = 74/303 (24%)
Query: 308 QIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNG 367
QI + I+ GF ++I ++ A R+ AR F+ +IA WN+
Sbjct: 119 QIQAQIIANGFQYNEYITPKLVTICATLKRMTYARQLFDQIPDPNIALWNS--------- 169
Query: 368 MIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFC 427
M GYAQ+E + LF M ++PN T V
Sbjct: 170 ----------------------MFRGYAQSESYREVVFLFFQMKGMDIRPNCFTFPVVLK 207
Query: 428 AIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSV 487
+ L EG H +++ N + +IDMY+ G++ A+++F + +R +V
Sbjct: 208 SCGKINALIEGEQVHCFLIKCGFRGNPFVGTTLIDMYSAGGTVGDAYKIFCEMFER--NV 265
Query: 488 SPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKS 547
W ++I G + D +++ +R++ L +I G +
Sbjct: 266 VAWTSMINGYILSADLVSARRLFDLAPERDVVLWNIMVSGYIE----------------- 308
Query: 548 MKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVE 607
G + +A ++ MP + DV+ W T+L +GNVE
Sbjct: 309 -----------------------GGDMVEARKLFXEMPNR-DVMFWNTVLKGYATNGNVE 344
Query: 608 VGE 610
E
Sbjct: 345 ALE 347
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 123/302 (40%), Gaps = 71/302 (23%)
Query: 6 FHSVFNSQKANLQNSDY---ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQN 62
F V S K L SD + LV+ L C+ A+ G+ +H SGL+ N ++ N
Sbjct: 374 FFEVLGSFKRMLSESDVPPNDATLVTVLSACARLGALDLGKWVHVYAESSGLKGNVYVGN 433
Query: 63 SLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVS 122
+L+++YAKCG+I A S+F T D ++ N +I G + R D
Sbjct: 434 ALMDMYAKCGIIENAISVFRGMDTKDLISWNTLIGGLAMHSRGAD--------------- 478
Query: 123 YTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVI 182
AL +F M+ G P+ +T ++ + H+G
Sbjct: 479 ----------------ALNLFFQMKNAGQKPDGITFIGILCACTHMG------------- 509
Query: 183 KLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARE 242
L+ DGF + + + Y + I + M++ A+AG +E A
Sbjct: 510 -LVEDGFAYFQS-MADDYLIMP---------------QIEHYGCMVDMLARAGRLEQAXA 552
Query: 243 LFERIPSK-DVVSWGTMIDG---YLQVERLSEALTMYRAMLCDGIAP-NDVMIVDLISAC 297
++P + D V W ++ Y VE L+E L + R + + P N VM+ ++
Sbjct: 553 FVRKMPVEADGVIWAGLLGACRIYKNVE-LAE-LALQRLIELEPKNPANYVMLSNIYGDA 610
Query: 298 GR 299
GR
Sbjct: 611 GR 612
>gi|345505226|gb|AEN99837.1| chlororespiratory reduction 4, partial [Lobularia maritima]
Length = 570
Score = 304 bits (779), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 188/532 (35%), Positives = 286/532 (53%), Gaps = 44/532 (8%)
Query: 137 REALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNL 196
R+AL + M V ++ +L+ V + LG E +HG + K +I + + L
Sbjct: 67 RQALFLLCSMIENNVPVDKFSLSLVTKACSRLGFAKEGMQIHGFLTKTVICSDLFLQNCL 126
Query: 197 LNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPS--KDVVS 254
+ +Y CS L AR +FD M +R+ VS+N M++G+ K GL+E ARELF+ +P K+++S
Sbjct: 127 IGLYIKCSCLGYARQVFDRMPQRDSVSYNSMIDGYVKCGLIESARELFDLMPKEKKNLIS 186
Query: 255 WGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIV 314
W +MI GY Q E DG VD+ S M + + +S+I
Sbjct: 187 WNSMIGGYAQRE--------------DG--------VDIASKLFAEMPEKDLISWNSLI- 223
Query: 315 KAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQ 374
Y GRI A+ F++ + + +W +I G+ + G + A+
Sbjct: 224 ---------------DGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHKAKS 268
Query: 375 LFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGM-VDAGVKPNEITMVSVFCAIASSG 433
LF+ M RDV ++++M+ GY QN+ ALE+F+ M ++ + P+E T+V V AIA G
Sbjct: 269 LFDVMPHRDVVAYNSMMGGYVQNKYHMEALEVFYDMEKESHLSPDETTLVIVLSAIAQLG 328
Query: 434 TLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAI 493
L + H Y++ L+ L A+IDMY+KCGSI A VF I ++ S+ WNA+
Sbjct: 329 RLSKAVDIHLYIVEKRFLLDGKLGVALIDMYSKCGSIQQAMAVFEGIENK--SIDHWNAM 386
Query: 494 ICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYN 553
I GLA+HG + ++EKR IK + ITF+GVL+ C H+GLV G F+ M+ +
Sbjct: 387 IGGLAVHGLGEAAFDMLMEIEKRFIKPDYITFVGVLNACSHSGLVKEGLLCFELMRRKHK 446
Query: 554 VEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAA 613
+EP L+HYGCMVDLL R+G +E A+ +I MP++ + VIW T L A H E E
Sbjct: 447 IEPRLQHYGCMVDLLARSGSIELAKHLISEMPIEPNDVIWRTFLNACSHHKEFETRELVV 506
Query: 614 KSLAGLQPSHGPSR-VLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
LQ + PS VLLSN+YA WED +R M++ ++++PG S +
Sbjct: 507 AENLILQAGYNPSSYVLLSNMYASFEMWEDVRRVRTMMKERKIEKVPGCSWI 558
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 131/463 (28%), Positives = 217/463 (46%), Gaps = 77/463 (16%)
Query: 16 NLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLIS 75
N+ + L+LV+ + CS +G QIH + K+ + S+ F+QN LI LY KC +
Sbjct: 80 NVPVDKFSLSLVT--KACSRLGFAKEGMQIHGFLTKTVICSDLFLQNCLIGLYIKCSCLG 137
Query: 76 QAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTP--IKCCVSYTSMIMGFAQN 133
A+ +FD D V+ N MI GY++ + ARE+FD P K +S+ SMI G+AQ
Sbjct: 138 YARQVFDRMPQRDSVSYNSMIDGYVKCGLIESARELFDLMPKEKKNLISWNSMIGGYAQR 197
Query: 134 DCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIIS 193
+ + V +AS + + M + +I
Sbjct: 198 E-------------------DGVDIASKLFAE-------------------MPEKDLISW 219
Query: 194 TNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVV 253
+L++ Y + +A+ LFD M R++V+W M++G+AK G V A+ LF+ +P +DVV
Sbjct: 220 NSLIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHKAKSLFDVMPHRDVV 279
Query: 254 SWGTMIDGYLQVERLSEALTMYRAMLCDG-IAPNDVMIVDLISACGRAMAFGEGLQIHSI 312
++ +M+ GY+Q + EAL ++ M + ++P++ +V ++SA + + + IH
Sbjct: 280 AYNSMMGGYVQNKYHMEALEVFYDMEKESHLSPDETTLVIVLSAIAQLGRLSKAVDIHLY 339
Query: 313 IVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDH-IASWNALIAGFIRNGMIED 371
IV+ F + +I Y+ CG I A FE GI++ I WNA+I G +G+ E
Sbjct: 340 IVEKRFLLDGKLGVALIDMYSKCGSIQQAMAVFE-GIENKSIDHWNAMIGGLAVHGLGEA 398
Query: 372 ARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIAS 431
A + ++KR +KP+ IT V V A +
Sbjct: 399 AFDMLMEIEKR-------------------------------FIKPDYITFVGVLNACSH 427
Query: 432 SGTLKEGRWAHEYV-LNNSITLNDNLSAAIIDMYAKCGSINTA 473
SG +KEG E + + I ++D+ A+ GSI A
Sbjct: 428 SGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDLLARSGSIELA 470
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 103/384 (26%), Positives = 183/384 (47%), Gaps = 39/384 (10%)
Query: 251 DVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIH 310
D W +I + +AL + +M+ + + + + + AC R EG+QIH
Sbjct: 49 DPFLWNAVIKSHSHGVDPRQALFLLCSMIENNVPVDKFSLSLVTKACSRLGFAKEGMQIH 108
Query: 311 SIIVKAGFDCYD-FIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMI 369
+ K C D F+Q +I Y C + AR F+ + S+N++I G+++ G+I
Sbjct: 109 GFLTKTVI-CSDLFLQNCLIGLYIKCSCLGYARQVFDRMPQRDSVSYNSMIDGYVKCGLI 167
Query: 370 EDARQLFNNM--QKRDVYSWSAMISGYAQNEQP-NMALELFHGMVDAGVKPNEITMVSVF 426
E AR+LF+ M +K+++ SW++MI GYAQ E ++A +LF M + + I+ S+
Sbjct: 168 ESARELFDLMPKEKKNLISWNSMIGGYAQREDGVDIASKLFAEMPEKDL----ISWNSLI 223
Query: 427 CAIASSGTLKEGRWAHEYVLNNSITLNDNLS-AAIIDMYAKCGSINTA---FEVFYHIRD 482
G +K GR L + + D ++ A +ID YAK G ++ A F+V H RD
Sbjct: 224 -----DGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHKAKSLFDVMPH-RD 277
Query: 483 RTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKR-NIKLNSITFIGVLSTCCHAGLVDLG 541
V +N+++ G + L+++ D+EK ++ + T + VLS G
Sbjct: 278 ----VVAYNSMMGGYVQNKYHMEALEVFYDMEKESHLSPDETTLVIVLSAIAQLG----- 328
Query: 542 ERYFKSMK-SVYNVEP----DLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTL 596
R K++ +Y VE D K ++D+ + G ++ A V + K+ + W +
Sbjct: 329 -RLSKAVDIHLYIVEKRFLLDGKLGVALIDMYSKCGSIQQAMAVFEGIENKS-IDHWNAM 386
Query: 597 LAASRIHGNVEVGERAAKSLAGLQ 620
+ +HG +GE A L ++
Sbjct: 387 IGGLAVHG---LGEAAFDMLMEIE 407
>gi|15241714|ref|NP_198751.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171567|sp|Q9FLZ9.1|PP405_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g39350
gi|10177683|dbj|BAB11009.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332007040|gb|AED94423.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 677
Score = 304 bits (779), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 186/625 (29%), Positives = 301/625 (48%), Gaps = 95/625 (15%)
Query: 42 GQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIR 101
G +H I +S + ++QN+L+ +Y G + A+ +FD D ++ N MISGY R
Sbjct: 136 GLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYR 195
Query: 102 NDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASV 161
N +NDA +FD W M V + T+ S+
Sbjct: 196 NGYMNDALMMFD----------------------W---------MVNESVDLDHATIVSM 224
Query: 162 ISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNI 221
+ HL + R +H LV + + + + L+NMY C + EAR +FD M+ R++
Sbjct: 225 LPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDV 284
Query: 222 VSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCD 281
++W M+NG+ + G VE AL + R M +
Sbjct: 285 ITWTCMINGYTEDGDVE-------------------------------NALELCRLMQFE 313
Query: 282 GIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLA 341
G+ PN V I L+S CG A+ +G +H V+ I+ ++I YA C R++L
Sbjct: 314 GVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLC 373
Query: 342 RLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPN 401
F K H W+A+IAG ++N ++ DA LF M++ DV +PN
Sbjct: 374 FRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDV--------------EPN 419
Query: 402 MALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAII 461
+A T+ S+ A A+ L++ H Y+ + + + ++
Sbjct: 420 IA-----------------TLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLV 462
Query: 462 DMYAKCGSINTAFEVFYHIRDRTTS--VSPWNAIICGLAMHGDANLTLKIYSDLEKRNIK 519
+Y+KCG++ +A ++F I+++ S V W A+I G MHGD + L+++ ++ + +
Sbjct: 463 HVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVT 522
Query: 520 LNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEE 579
N ITF L+ C H+GLV+ G F+ M Y HY C+VDLLGRAG+L++A
Sbjct: 523 PNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYN 582
Query: 580 VIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGR 639
+I ++P + +WG LLAA H NV++GE AA L L+P + + VLL+NIYA GR
Sbjct: 583 LITTIPFEPTSTVWGALLAACVTHENVQLGEMAANKLFELEPENTGNYVLLANIYAALGR 642
Query: 640 WEDAFSIRKEMRDCGMKRLPGFSGV 664
W+D +R M + G+++ PG S +
Sbjct: 643 WKDMEKVRSMMENVGLRKKPGHSTI 667
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 119/486 (24%), Positives = 201/486 (41%), Gaps = 99/486 (20%)
Query: 25 ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSC 84
+VS L C + G+ +H L+ + L ++N+L+N+Y KCG + +A+ +FD
Sbjct: 220 TIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRM 279
Query: 85 STLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFR 144
D + MI+GY + G +N ALE+ R
Sbjct: 280 ERRDVITWTCMINGYTED--------------------------GDVEN-----ALELCR 308
Query: 145 DMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCS 204
M+ GV PN VT+AS++S + + + LHG ++ + +II T+L++MY C
Sbjct: 309 LMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCK 368
Query: 205 SLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQ 264
+ +F + + W+ ++ G + LV A LF+R+ +DV
Sbjct: 369 RVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDV------------ 416
Query: 265 VERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFI 324
PN + L+ A + + IH + K GF
Sbjct: 417 -------------------EPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDA 457
Query: 325 QATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQK--- 381
++H Y+ CG + E A ++FN +Q+
Sbjct: 458 ATGLVHVYSKCGTL-------------------------------ESAHKIFNGIQEKHK 486
Query: 382 -RDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRW 440
+DV W A+ISGY + + AL++F MV +GV PNEIT S A + SG ++EG
Sbjct: 487 SKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLT 546
Query: 441 AHEYVLNNSITL-NDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAM 499
++L + TL N I+D+ + G ++ A+ + I TS + W A++
Sbjct: 547 LFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTS-TVWGALLAACVT 605
Query: 500 HGDANL 505
H + L
Sbjct: 606 HENVQL 611
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/353 (23%), Positives = 160/353 (45%), Gaps = 38/353 (10%)
Query: 195 NLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLN---GFAKAGLVELARELFERIPSKD 251
+LLN + S+ + ++L + VS +++ +A G + AR+LFE +P
Sbjct: 20 SLLNHFAATQSISKTKALHCHVITGGRVSGHILSTLSVTYALCGHITYARKLFEEMPQSS 79
Query: 252 VVSWGTMIDGYLQVERLSEALTMYRAMLCDGI--APNDVMIVDLISACGRAMAFGEGLQI 309
++S+ +I Y++ +A++++ M+ +G+ P+ + A G + GL +
Sbjct: 80 LLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGLVV 139
Query: 310 HSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMI 369
H I+++ F ++Q ++ Y G++ +AR F++ + SWN +I+G+ RNG +
Sbjct: 140 HGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYM 199
Query: 370 EDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAI 429
DA +F+ W MV+ V + T+VS+
Sbjct: 200 NDALMMFD---------W----------------------MVNESVDLDHATIVSMLPVC 228
Query: 430 ASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSP 489
L+ GR H+ V + + A+++MY KCG ++ A VF + R V
Sbjct: 229 GHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERR--DVIT 286
Query: 490 WNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGE 542
W +I G GD L++ ++ ++ N++T ++S C A V+ G+
Sbjct: 287 WTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGK 339
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/292 (21%), Positives = 121/292 (41%), Gaps = 58/292 (19%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+ + S + C + V+ G+ +H + + S+ I+ SLI++YAKC + +F
Sbjct: 320 VTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSG 379
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
S + +I+G ++N+ ++D AL +F
Sbjct: 380 ASKYHTGPWSAIIAGCVQNELVSD-------------------------------ALGLF 408
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
+ MR V PN TL S++ + L + + +H + K + +T L+++Y C
Sbjct: 409 KRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKC 468
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYL 263
+L A +F+ ++E++ SKDVV WG +I GY
Sbjct: 469 GTLESAHKIFNGIQEKH---------------------------KSKDVVLWGALISGYG 501
Query: 264 QVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVK 315
AL ++ M+ G+ PN++ ++AC + EGL + +++
Sbjct: 502 MHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLE 553
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 114/243 (46%), Gaps = 6/243 (2%)
Query: 367 GMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVK--PNEITMVS 424
G I AR+LF M + + S++ +I Y + + A+ +F MV GVK P+ T
Sbjct: 63 GHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPF 122
Query: 425 VFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRT 484
V A ++K G H +L + + + A++ MY G + A +VF +++R
Sbjct: 123 VAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNR- 181
Query: 485 TSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERY 544
V WN +I G +G N L ++ + ++ L+ T + +L C H +++G
Sbjct: 182 -DVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNV 240
Query: 545 FKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHG 604
K ++ + ++ +V++ + G++++A V M + DV+ W ++ G
Sbjct: 241 HKLVEE-KRLGDKIEVKNALVNMYLKCGRMDEARFVFDRME-RRDVITWTCMINGYTEDG 298
Query: 605 NVE 607
+VE
Sbjct: 299 DVE 301
>gi|449469198|ref|XP_004152308.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Cucumis sativus]
gi|449484855|ref|XP_004156999.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Cucumis sativus]
Length = 724
Score = 304 bits (779), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 168/472 (35%), Positives = 249/472 (52%), Gaps = 34/472 (7%)
Query: 192 ISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKD 251
IS LL+MY C SLV+A +FDEM R++ SWN+M++G+ K G E AR LF+++P++D
Sbjct: 155 ISNRLLDMYAKCGSLVDAEKVFDEMVHRDLCSWNIMISGYVKGGNFEKARNLFDKMPNRD 214
Query: 252 VVSWGTMIDGYLQVERLSEALTMYRAMLC-DGIAPNDVMIVDLISACGRAMAFGEGLQIH 310
SW +I G +Q R EAL +YR M D N I ++A + G +IH
Sbjct: 215 NFSWTAIISGCVQHNRPEEALELYRLMQKHDYSKSNKCTISSALAASAAIPSLHMGKKIH 274
Query: 311 SIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIE 370
I++ G D + + +++ Y CG I E
Sbjct: 275 GHIMRMGLDSDEVVWCSLLDMYGKCGSI-------------------------------E 303
Query: 371 DARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIA 430
+AR +F+ M++RDV SW+ MI Y +N + LF ++++ + PN+ T V A A
Sbjct: 304 EARYIFDKMEERDVVSWTTMIHTYLKNGRREEGFALFRHLMNSNIMPNDFTFAGVLNACA 363
Query: 431 SSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPW 490
G+ H Y++ + ++A++ MY+KCG I A VF + + W
Sbjct: 364 DLAAEDLGKQIHAYMVRVGFDSFSSAASALVHMYSKCGDIENAKSVFEILPQ--PDLFSW 421
Query: 491 NAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKS 550
+++ G A HG + L + L K K + I FIGVLS C HAGLVD G YF S+K
Sbjct: 422 TSLLVGYAQHGQHDKALHFFELLLKSGTKPDGIAFIGVLSACAHAGLVDKGLEYFHSIKE 481
Query: 551 VYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGE 610
+ + + HY C++DLL RAGQ +AE +I MP+K D IW LL RIHGN+E+ +
Sbjct: 482 KHGLTRTIDHYACIIDLLARAGQFTEAESIINEMPIKPDKYIWAALLGGCRIHGNLELAK 541
Query: 611 RAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
RAAKSL ++P + + V L+NIYA AG + +IR+ M G+ + PG S
Sbjct: 542 RAAKSLFEIEPENPATYVTLANIYASAGMRAEEANIRETMDSRGIVKKPGMS 593
Score = 208 bits (529), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 139/518 (26%), Positives = 248/518 (47%), Gaps = 67/518 (12%)
Query: 22 YELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMF 81
Y ++ L++C A+ +G+Q+H+ I SG +I N L+++YAKCG + A+ +F
Sbjct: 118 YASIYLTLLKFCLKQRALKEGKQVHAHIKTSG-SIGLYISNRLLDMYAKCGSLVDAEKVF 176
Query: 82 DSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALE 141
D D + NIMISGY++ AR +FDK P + S+T++I G Q++ EALE
Sbjct: 177 DEMVHRDLCSWNIMISGYVKGGNFEKARNLFDKMPNRDNFSWTAIISGCVQHNRPEEALE 236
Query: 142 VFRDMRILGVIP-NEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMY 200
++R M+ N+ T++S +++S + + + +HG ++++ +D ++ +LL+MY
Sbjct: 237 LYRLMQKHDYSKSNKCTISSALAASAAIPSLHMGKKIHGHIMRMGLDSDEVVWCSLLDMY 296
Query: 201 CVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMID 260
C S+ EAR +FD+M+ER++VSW M++ + K G
Sbjct: 297 GKCGSIEEARYIFDKMEERDVVSWTTMIHTYLKNG------------------------- 331
Query: 261 GYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDC 320
R E ++R ++ I PND +++AC A G QIH+ +V+ GFD
Sbjct: 332 ------RREEGFALFRHLMNSNIMPNDFTFAGVLNACADLAAEDLGKQIHAYMVRVGFDS 385
Query: 321 YDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ 380
+ + ++H Y+ CG I A+ FE+ + + SW +L+ G
Sbjct: 386 FSSAASALVHMYSKCGDIENAKSVFEILPQPDLFSWTSLLVG------------------ 427
Query: 381 KRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG-R 439
YAQ+ Q + AL F ++ +G KP+ I + V A A +G + +G
Sbjct: 428 -------------YAQHGQHDKALHFFELLLKSGTKPDGIAFIGVLSACAHAGLVDKGLE 474
Query: 440 WAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAM 499
+ H + +T + A IID+ A+ G A + + + W A++ G +
Sbjct: 475 YFHSIKEKHGLTRTIDHYACIIDLLARAGQFTEAESIINEMPIKPDKYI-WAALLGGCRI 533
Query: 500 HGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGL 537
HG+ L + L + + N T++ + + AG+
Sbjct: 534 HGNLELAKRAAKSLFEIEPE-NPATYVTLANIYASAGM 570
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 101/341 (29%), Positives = 165/341 (48%), Gaps = 12/341 (3%)
Query: 267 RLSEALTM-YRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQ 325
RL EA+ + YR P + + L+ C + A EG Q+H+ I +G +I
Sbjct: 103 RLREAVQLLYRIE-----KPYASIYLTLLKFCLKQRALKEGKQVHAHIKTSG-SIGLYIS 156
Query: 326 ATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVY 385
++ YA CG + A F+ + + SWN +I+G+++ G E AR LF+ M RD +
Sbjct: 157 NRLLDMYAKCGSLVDAEKVFDEMVHRDLCSWNIMISGYVKGGNFEKARNLFDKMPNRDNF 216
Query: 386 SWSAMISGYAQNEQPNMALELFHGMVDAGV-KPNEITMVSVFCAIASSGTLKEGRWAHEY 444
SW+A+ISG Q+ +P ALEL+ M K N+ T+ S A A+ +L G+ H +
Sbjct: 217 SWTAIISGCVQHNRPEEALELYRLMQKHDYSKSNKCTISSALAASAAIPSLHMGKKIHGH 276
Query: 445 VLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDAN 504
++ + ++ + +++DMY KCGSI A +F + +R V W +I +G
Sbjct: 277 IMRMGLDSDEVVWCSLLDMYGKCGSIEEARYIFDKMEER--DVVSWTTMIHTYLKNGRRE 334
Query: 505 LTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCM 564
++ L NI N TF GVL+ C DLG++ M V + +
Sbjct: 335 EGFALFRHLMNSNIMPNDFTFAGVLNACADLAAEDLGKQIHAYMVRV-GFDSFSSAASAL 393
Query: 565 VDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGN 605
V + + G +E+A+ V +P + D+ W +LL HG
Sbjct: 394 VHMYSKCGDIENAKSVFEILP-QPDLFSWTSLLVGYAQHGQ 433
>gi|147791850|emb|CAN61826.1| hypothetical protein VITISV_027628 [Vitis vinifera]
Length = 688
Score = 304 bits (779), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 170/471 (36%), Positives = 263/471 (55%), Gaps = 49/471 (10%)
Query: 234 AGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDL 293
AG ++ A+ +F++IP + + ++I GY + +A+ ++R M+C G++PN+ + +
Sbjct: 161 AGDLQYAQRMFDQIPQPNKFMYNSLIRGYSNSDDPIDAVLLFRRMICSGLSPNEFTLPFV 220
Query: 294 ISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFE------- 346
+ ACG A+ E + +H + +K G F+Q +I Y CG I+ AR F+
Sbjct: 221 LKACGCKSAYWEAVLVHGLAIKLGIGSLVFVQNALIAVYVVCGLIHCARKLFDDITDKTL 280
Query: 347 ---------LGIK-------------------------------DHIASWNALIAGFIRN 366
G+K ++ SW ++I+ + ++
Sbjct: 281 VSWNSMIEITGVKIDIIVRNALXDMYAKCGNLHSAQAIFDRTQEKNVVSWTSMISAYAQH 340
Query: 367 GMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVF 426
G IE ARQ+F+ M ++V SW++MIS Y + Q AL+LF+ M ++ V P+E T+VS+
Sbjct: 341 GSIEVARQIFDQMPGKNVVSWNSMISCYLREGQYREALDLFNKMRNSRVVPDEATLVSIL 400
Query: 427 CAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTS 486
A + G L G+ H Y+L+N L ++IDMYAKCG + TA ++F + + +
Sbjct: 401 AACSQLGDLVMGKKIHNYILSNKGAYGVTLYNSLIDMYAKCGPVVTALDIFLEMPGK--N 458
Query: 487 VSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFK 546
+ WN II LA+HG +K++ +++ + IT G+LS C H+GLVD+G YF
Sbjct: 459 LVSWNVIIGALALHGCGLEAIKLFEEMQADGTLPDEITLTGLLSACSHSGLVDMGLYYFD 518
Query: 547 SMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNV 606
M +Y V +++HY CMVDLLGR G L +A E+I MPMK DVV+WG LL A RIHGNV
Sbjct: 519 RMGVIYRVXREIEHYACMVDLLGRGGLLGEAIELIGRMPMKPDVVVWGALLGACRIHGNV 578
Query: 607 EVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKR 657
E+G++ K L L+P G VL+SNIY +A RWED IRK M D G+K+
Sbjct: 579 EIGKQILKQLLELEPHSGGLYVLISNIYWEAQRWEDVKKIRKLMIDRGIKK 629
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 99/361 (27%), Positives = 168/361 (46%), Gaps = 59/361 (16%)
Query: 105 LNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISS 164
L A+ +FD+ P Y S+I G++ +D +A+ +FR M G+ PNE TL V+ +
Sbjct: 164 LQYAQRMFDQIPQPNKFMYNSLIRGYSNSDDPIDAVLLFRRMICSGLSPNEFTLPFVLKA 223
Query: 165 SVHLGGIWECRMLHGLVIKLMIDGFV---------------------------------- 190
WE ++HGL IKL I V
Sbjct: 224 CGCKSAYWEAVLVHGLAIKLGIGSLVFVQNALIAVYVVCGLIHCARKLFDDITDKTLVSW 283
Query: 191 -------------IISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLV 237
I+ L +MY C +L A+++FD +E+N+VSW M++ +A+ G +
Sbjct: 284 NSMIEITGVKIDIIVRNALXDMYAKCGNLHSAQAIFDRTQEKNVVSWTSMISAYAQHGSI 343
Query: 238 ELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISAC 297
E+AR++F+++P K+VVSW +MI YL+ + EAL ++ M + P++ +V +++AC
Sbjct: 344 EVARQIFDQMPGKNVVSWNSMISCYLREGQYREALDLFNKMRNSRVVPDEATLVSILAAC 403
Query: 298 GRAMAFGEGLQIHSIIVK----AGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHI 353
+ G +IH+ I+ G Y+ ++I YA CG + A F ++
Sbjct: 404 SQLGDLVMGKKIHNYILSNKGAYGVTLYN----SLIDMYAKCGPVVTALDIFLEMPGKNL 459
Query: 354 ASWNALIAGFIRNGMIEDARQLFNNMQK----RDVYSWSAMISGYAQNEQPNMALELFHG 409
SWN +I +G +A +LF MQ D + + ++S + + +M L F
Sbjct: 460 VSWNVIIGALALHGCGLEAIKLFEEMQADGTLPDEITLTGLLSACSHSGLVDMGLYYFDR 519
Query: 410 M 410
M
Sbjct: 520 M 520
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 99/387 (25%), Positives = 180/387 (46%), Gaps = 58/387 (14%)
Query: 46 HSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRL 105
+S+I +G++ + ++N+L ++YAKCG + A+++FD + V+ MIS Y ++ +
Sbjct: 284 NSMIEITGVKIDIIVRNALXDMYAKCGNLHSAQAIFDRTQEKNVVSWTSMISAYAQHGSI 343
Query: 106 NDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSS 165
AR++FD+ P K VS+ SMI + + +REAL++F MR V+P+E TL S++++
Sbjct: 344 EVARQIFDQMPGKNVVSWNSMISCYLREGQYREALDLFNKMRNSRVVPDEATLVSILAAC 403
Query: 166 VHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWN 225
LG + + +H ++ V + +L++MY C +V A +F EM +N+VSWN
Sbjct: 404 SQLGDLVMGKKIHNYILSNKGAYGVTLYNSLIDMYAKCGPVVTALDIFLEMPGKNLVSWN 463
Query: 226 VMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAP 285
V++ A G A +LFE M DG P
Sbjct: 464 VIIGALALHGCGLEAIKLFEE-------------------------------MQADGTLP 492
Query: 286 NDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD------FIQATIIHFYAACGRIN 339
+++ + L+SAC HS +V G +D + I H+ +
Sbjct: 493 DEITLTGLLSACS-----------HSGLVDMGLYYFDRMGVIYRVXREIEHYACMVDLLG 541
Query: 340 LARLQFE-------LGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWS--AM 390
L E + +K + W AL+ +G +E +Q+ + + + +S +
Sbjct: 542 RGGLLGEAIELIGRMPMKPDVVVWGALLGACRIHGNVEIGKQILKQLLELEPHSGGLYVL 601
Query: 391 ISG-YAQNEQPNMALELFHGMVDAGVK 416
IS Y + ++ ++ M+D G+K
Sbjct: 602 ISNIYWEAQRWEDVKKIRKLMIDRGIK 628
>gi|326507322|dbj|BAJ95738.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 593
Score = 304 bits (779), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 182/557 (32%), Positives = 286/557 (51%), Gaps = 38/557 (6%)
Query: 108 AREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVH 167
AR +FD P ++ + ++ + L+ F M G + V S
Sbjct: 23 ARNLFDAVPRPAPALCSTFLSSLSRASSHHDLLQTFSSMHRKGAYVPSGCVPLVFKSCAL 82
Query: 168 LGGIWECRMLH--GLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWN 225
+ R +H LV L+ D FV+ T L++ Y + A S FDEM ++ + N
Sbjct: 83 TASSCQGRQVHCHALVRGLLGDVFVL--TALVDFYAKNGDMESAVSAFDEMPVKDPIPIN 140
Query: 226 VMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAP 285
++ G++KAG V+ AR LF+ + + SW +MI Y EAL ++ ML +G P
Sbjct: 141 CLITGYSKAGDVDKARRLFDGMERRTSASWNSMIACYAHGGEFREALALFDRMLSEGARP 200
Query: 286 NDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQF 345
N + I + S C ++ G ++ +I + D +Q I+H
Sbjct: 201 NAITITSVFSICAKSGDLDTGKRVRDLIGE------DDLQNVIVH--------------- 239
Query: 346 ELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALE 405
AL+ +++ I+DAR+ F+ M +RDV +WS MI+GYAQN +P +LE
Sbjct: 240 -----------TALMEMYVKCRAIDDARREFDRMSQRDVVAWSTMIAGYAQNGRPLESLE 288
Query: 406 LFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYA 465
LF M +PNE+T+V V A A G+ + Y N + L L +A+IDMY
Sbjct: 289 LFERMKATDCRPNEVTLVGVISACAQLGSDELVEQIGNYAENQRLPLTSYLGSALIDMYT 348
Query: 466 KCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITF 525
+CG + A VF + + V WN++I GLAM+G A + +Y + + ++ N ITF
Sbjct: 349 RCGHVGRARSVFSRMEQK--GVITWNSMIRGLAMNGFAEDAISLYEKMAENGVQPNEITF 406
Query: 526 IGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMP 585
+ +L+ C HAGLVD G +F+ MK + V P ++H C+VDLL ++G L +A + I M
Sbjct: 407 VALLAACTHAGLVDQGMAFFEEMKREHLVSPQVEHCACIVDLLCKSGGLWEAYKFICDME 466
Query: 586 MKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFS 645
++ + VIW TLL++ R H +VE+ + A++ L ++P + VLLSNIYADAG W DA
Sbjct: 467 VEPNAVIWTTLLSSCRAHADVELAKLASRKLLAMEPDNSSIYVLLSNIYADAGLWGDARE 526
Query: 646 IRKEMRDCGMKRLPGFS 662
IR MR +++L +S
Sbjct: 527 IRDLMRSKNVQKLSAYS 543
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 123/477 (25%), Positives = 208/477 (43%), Gaps = 65/477 (13%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
+ C+ + QG+Q+H GL + F+ +L++ YAK G + A S FD DP
Sbjct: 77 FKSCALTASSCQGRQVHCHALVRGLLGDVFVLTALVDFYAKNGDMESAVSAFDEMPVKDP 136
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
+ N +I+GY + ++ AR +FD + S+ SMI +A +REAL +F M
Sbjct: 137 IPINCLITGYSKAGDVDKARRLFDGMERRTSASWNSMIACYAHGGEFREALALFDRMLSE 196
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
G PN +T+ SV S G + + + L+ + + VI+ T L+ MY C ++ +A
Sbjct: 197 GARPNAITITSVFSICAKSGDLDTGKRVRDLIGEDDLQN-VIVHTALMEMYVKCRAIDDA 255
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLS 269
R FD M +R++V+W+ M+ G+A+ G + ELFER+ + D
Sbjct: 256 RREFDRMSQRDVVAWSTMIAGYAQNGRPLESLELFERMKATDC----------------- 298
Query: 270 EALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATII 329
PN+V +V +ISAC + + QI + ++ + +I
Sbjct: 299 --------------RPNEVTLVGVISACAQLGSDELVEQIGNYAENQRLPLTSYLGSALI 344
Query: 330 HFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSA 389
Y CG + AR F + + +WN++I G NG ED
Sbjct: 345 DMYTRCGHVGRARSVFSRMEQKGVITWNSMIRGLAMNGFAED------------------ 386
Query: 390 MISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG-RWAHEYVLNN 448
A+ L+ M + GV+PNEIT V++ A +G + +G + E +
Sbjct: 387 -------------AISLYEKMAENGVQPNEITFVALLAACTHAGLVDQGMAFFEEMKREH 433
Query: 449 SITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANL 505
++ A I+D+ K G + A++ + +V W ++ H D L
Sbjct: 434 LVSPQVEHCACIVDLLCKSGGLWEAYKFICDMEVEPNAVI-WTTLLSSCRAHADVEL 489
>gi|359491266|ref|XP_002280289.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 663
Score = 304 bits (779), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 167/436 (38%), Positives = 251/436 (57%), Gaps = 12/436 (2%)
Query: 237 VELARELFERIPS-KDVVSWGTMIDGYLQVERLSEALTMYRAMLCDG--IAPNDVMIVDL 293
+ AR +F++ PS + W MI Y + E+L ++ ML G + + +
Sbjct: 103 LSFARIVFDQFPSLPPTIIWNLMIQAYSKTPSSQESLYLFHQMLAHGRPTSADKYTFTFV 162
Query: 294 ISACGRAMAF-GEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDH 352
+AC R G G +H ++VK G++ F+ ++++ Y+ R+ A+ F+ +
Sbjct: 163 FTACSRHPTLRGYGENVHGMVVKDGYESDIFVGNSLVNMYSIFSRMVDAKRVFDEMPQRD 222
Query: 353 IASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMV- 411
+ +W +++ G+ G + AR+LF+ M R+ SW+ M++GY + N AL+ F+ M+
Sbjct: 223 VITWTSVVKGYAMRGELVRARELFDMMPGRNDVSWAVMVAGYVGHRFYNEALQCFNDMLC 282
Query: 412 DAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSIN 471
VKPNE +VS+ A A G L +G+W H Y+ N I L+ N+S A+IDMYAKCG I+
Sbjct: 283 HDEVKPNEAVLVSILSACAHLGALDQGKWIHVYIDKNRILLSSNISTALIDMYAKCGRID 342
Query: 472 TAFEVF--YHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVL 529
A VF H RD T W ++I GL+MHG L +S++ K + IT +GVL
Sbjct: 343 CARRVFDGLHKRDLLT----WTSMISGLSMHGLGAECLWTFSEMLAEGFKPDDITLLGVL 398
Query: 530 STCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKAD 589
+ C H+GLV+ G F M ++ + P L+HYGC++DLLGRAG+LE A E I+SMPM+ D
Sbjct: 399 NGCSHSGLVEEGLSIFHDMIPLWGIVPKLEHYGCLIDLLGRAGRLESAFEAIKSMPMEPD 458
Query: 590 VVIWGTLLAASRIHGNVEVGERAAKSLAGLQP-SHGPSRVLLSNIYADAGRWEDAFSIRK 648
VV W LL+A RIHG+V++GER +A L P SHG VLLSN+YA G+WE +RK
Sbjct: 459 VVAWRALLSACRIHGDVDLGERIINHIAELCPGSHGGGYVLLSNLYASMGQWESVTKVRK 518
Query: 649 EMRDCGMKRLPGFSGV 664
M G + PG S +
Sbjct: 519 AMSQRGSEGCPGCSWI 534
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 131/480 (27%), Positives = 223/480 (46%), Gaps = 73/480 (15%)
Query: 38 AVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMIS 97
+++Q +QIH+ + GL NT + LI+ Y C
Sbjct: 67 SLTQIKQIHAQVVTHGLAQNTSLLGPLIHSYIGC-------------------------- 100
Query: 98 GYIRNDRLNDAREVFDKTP-IKCCVSYTSMIMGFAQNDCWREALEVFRDMRILG--VIPN 154
RN L+ AR VFD+ P + + + MI +++ +E+L +F M G +
Sbjct: 101 ---RN--LSFARIVFDQFPSLPPTIIWNLMIQAYSKTPSSQESLYLFHQMLAHGRPTSAD 155
Query: 155 EVTLASVISS-SVH--LGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARS 211
+ T V ++ S H L G E +HG+V+K + + + +L+NMY + S +V+A+
Sbjct: 156 KYTFTFVFTACSRHPTLRGYGE--NVHGMVVKDGYESDIFVGNSLVNMYSIFSRMVDAKR 213
Query: 212 LFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEA 271
+FDEM +R++++W ++ G+A G + ARELF+ +P ++ VSW M+ GY+ +EA
Sbjct: 214 VFDEMPQRDVITWTSVVKGYAMRGELVRARELFDMMPGRNDVSWAVMVAGYVGHRFYNEA 273
Query: 272 LTMYRAMLC-DGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIH 330
L + MLC D + PN+ ++V ++SAC A +G IH I K I +I
Sbjct: 274 LQCFNDMLCHDEVKPNEAVLVSILSACAHLGALDQGKWIHVYIDKNRILLSSNISTALID 333
Query: 331 FYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAM 390
YA CGRI+ AR F+ K + +W ++I+G +G+ +
Sbjct: 334 MYAKCGRIDCARRVFDGLHKRDLLTWTSMISGLSMHGLGAE------------------- 374
Query: 391 ISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG-RWAHEYVLNNS 449
L F M+ G KP++IT++ V + SG ++EG H+ +
Sbjct: 375 ------------CLWTFSEMLAEGFKPDDITLLGVLNGCSHSGLVEEGLSIFHDMIPLWG 422
Query: 450 ITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKI 509
I +ID+ + G + +AFE + V W A++ +HGD +L +I
Sbjct: 423 IVPKLEHYGCLIDLLGRAGRLESAFEAIKSM-PMEPDVVAWRALLSACRIHGDVDLGERI 481
>gi|125555946|gb|EAZ01552.1| hypothetical protein OsI_23585 [Oryza sativa Indica Group]
Length = 530
Score = 304 bits (779), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 175/539 (32%), Positives = 281/539 (52%), Gaps = 37/539 (6%)
Query: 126 MIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLM 185
+I A+ + + V+ D+R G++ + T V+ + L E R H IK
Sbjct: 20 LIRTLARRGSFARVMAVYYDLRARGLVADSFTYPFVLRAVGVLKLSVEGRKAHAAAIKTG 79
Query: 186 IDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFE 245
++L+ MY ML G V++AR++F+
Sbjct: 80 FRWDAYTGSSLMEMY-------------------------TML------GRVDIARKVFD 108
Query: 246 RIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGE 305
+PS+ +V W M+ Y++ R S A+ + M G+ P+ V +V ++AC RA
Sbjct: 109 EMPSRALVLWNMMVRCYIRCGRYSAAVALSEQMERSGVTPDRVTLVTAVTACSRARDLSL 168
Query: 306 GLQIHSIIVKA-GFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFI 364
G +IH + GF+ + ++ Y + A FE +I SW L++G+
Sbjct: 169 GRRIHVYMDNVFGFNLP--VANALLDMYTKNDCLEEAVKLFEQMPARNIISWTILVSGYG 226
Query: 365 RNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVS 424
G ++ AR LFN +++D+ W+AMI+ Q+ AL LF M V+P+ T+V+
Sbjct: 227 LAGQLDKARVLFNQCKEKDLILWTAMINACVQHGCFEEALTLFRDMQMQRVEPDRFTVVT 286
Query: 425 VFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRT 484
+ A+ G L +G W H+Y + ++ L A+IDMY+KCG I + EVF+ ++ R
Sbjct: 287 LLTCCANLGALDQGEWIHQYAEQRKMKIDAVLGTALIDMYSKCGHIEKSLEVFWRMQGR- 345
Query: 485 TSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERY 544
+ W AIICGLA +G A L+++ D+++ +K + +TFIGVLS CCH GLVD G +
Sbjct: 346 -DATAWTAIICGLATNGQAGRALELFQDMQRSKVKPDGVTFIGVLSACCHGGLVDEGRKQ 404
Query: 545 FKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVV-IWGTLLAASRIH 603
F +M+ VY +EP ++HY C+V+LLGRAG L++AE +I +P+ D + ++G LL A + H
Sbjct: 405 FHAMREVYQIEPRVEHYSCLVNLLGRAGLLDEAERLIGDVPINKDAMPLFGALLTACKAH 464
Query: 604 GNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
GNVE+ ER K + +L+SN+YA A RWED +R +M +K+ G S
Sbjct: 465 GNVEMSERLTKRICEQDSQITDVNLLMSNVYATASRWEDVIRVRGKMAHPTVKKTAGCS 523
Score = 159 bits (403), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 111/489 (22%), Positives = 215/489 (43%), Gaps = 68/489 (13%)
Query: 41 QGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYI 100
+G++ H+ K+G + + +SL+ +Y G
Sbjct: 67 EGRKAHAAAIKTGFRWDAYTGSSLMEMYTMLG---------------------------- 98
Query: 101 RNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLAS 160
R++ AR+VFD+ P + V + M+ + + + A+ + M GV P+ VTL +
Sbjct: 99 ---RVDIARKVFDEMPSRALVLWNMMVRCYIRCGRYSAAVALSEQMERSGVTPDRVTLVT 155
Query: 161 VISSSVHLGGIWECRMLHGLVIKLMIDGF-VIISTNLLNMYCVCSSLVEARSLFDEMKER 219
+++ + R +H V + GF + ++ LL+MY L EA LF++M R
Sbjct: 156 AVTACSRARDLSLGRRIH--VYMDNVFGFNLPVANALLDMYTKNDCLEEAVKLFEQMPAR 213
Query: 220 NIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAML 279
NI+SW ++++G+ AG ++ AR LF + KD++ W MI+ +Q EALT++R M
Sbjct: 214 NIISWTILVSGYGLAGQLDKARVLFNQCKEKDLILWTAMINACVQHGCFEEALTLFRDMQ 273
Query: 280 CDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRIN 339
+ P+ +V L++ C A +G IH + + +I Y+ CG I
Sbjct: 274 MQRVEPDRFTVVTLLTCCANLGALDQGEWIHQYAEQRKMKIDAVLGTALIDMYSKCGHI- 332
Query: 340 LARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQ 399
E + ++F MQ RD +W+A+I G A N Q
Sbjct: 333 ------------------------------EKSLEVFWRMQGRDATAWTAIICGLATNGQ 362
Query: 400 PNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLS-- 457
ALELF M + VKP+ +T + V A G + EGR + + + +
Sbjct: 363 AGRALELFQDMQRSKVKPDGVTFIGVLSACCHGGLVDEGR-KQFHAMREVYQIEPRVEHY 421
Query: 458 AAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRN 517
+ ++++ + G ++ A + + ++ + A++ HG+ ++ ++ + +++
Sbjct: 422 SCLVNLLGRAGLLDEAERLIGDVPINKDAMPLFGALLTACKAHGNVEMSERLTKRICEQD 481
Query: 518 IKLNSITFI 526
++ + +
Sbjct: 482 SQITDVNLL 490
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 125/241 (51%), Gaps = 1/241 (0%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
+ LV+A+ CS +S G++IH + + N + N+L+++Y K + +A +F+
Sbjct: 150 RVTLVTAVTACSRARDLSLGRRIH-VYMDNVFGFNLPVANALLDMYTKNDCLEEAVKLFE 208
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+ ++ I++SGY +L+ AR +F++ K + +T+MI Q+ C+ EAL +
Sbjct: 209 QMPARNIISWTILVSGYGLAGQLDKARVLFNQCKEKDLILWTAMINACVQHGCFEEALTL 268
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
FRDM++ V P+ T+ ++++ +LG + + +H + + ++ T L++MY
Sbjct: 269 FRDMQMQRVEPDRFTVVTLLTCCANLGALDQGEWIHQYAEQRKMKIDAVLGTALIDMYSK 328
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
C + ++ +F M+ R+ +W ++ G A G A ELF+ + V G G
Sbjct: 329 CGHIEKSLEVFWRMQGRDATAWTAIICGLATNGQAGRALELFQDMQRSKVKPDGVTFIGV 388
Query: 263 L 263
L
Sbjct: 389 L 389
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 101/232 (43%), Gaps = 34/232 (14%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
+V+ L C+ A+ QG+ IH + ++ + + +LI++Y+KCG I KS+
Sbjct: 281 RFTVVTLLTCCANLGALDQGEWIHQYAEQRKMKIDAVLGTALIDMYSKCGHIE--KSL-- 336
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
EVF + + ++T++I G A N ALE+
Sbjct: 337 ---------------------------EVFWRMQGRDATAWTAIICGLATNGQAGRALEL 369
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECR-MLHGLVIKLMIDGFVIISTNLLNMYC 201
F+DM+ V P+ VT V+S+ H G + E R H + I+ V + L+N+
Sbjct: 370 FQDMQRSKVKPDGVTFIGVLSACCHGGLVDEGRKQFHAMREVYQIEPRVEHYSCLVNLLG 429
Query: 202 VCSSLVEARSLFDE--MKERNIVSWNVMLNGFAKAGLVELARELFERIPSKD 251
L EA L + + + + + +L G VE++ L +RI +D
Sbjct: 430 RAGLLDEAERLIGDVPINKDAMPLFGALLTACKAHGNVEMSERLTKRICEQD 481
>gi|345505232|gb|AEN99840.1| chlororespiratory reduction 4, partial [Olimarabidopsis pumila]
Length = 579
Score = 304 bits (779), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 187/546 (34%), Positives = 293/546 (53%), Gaps = 45/546 (8%)
Query: 123 YTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVI 182
+ +MI + R AL +F M +GV ++ +L+ V+ + LG + +HG +
Sbjct: 55 WNAMIKSHSHGTDPRRALLLFCLMLEIGVPVDKFSLSLVMKACSRLGFVKGGLQIHGFLK 114
Query: 183 KLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARE 242
K + + + L+ +Y C L AR +FD M +R+ VS+N M++G+ K G +E A E
Sbjct: 115 KTGLWSDLFLQNCLIGLYLKCGCLGFARQIFDRMPQRDSVSYNSMIDGYVKCGSIESASE 174
Query: 243 LFERIPS--KDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRA 300
LF+ +P K+++SW ++I GY Q SE + + + + P DLIS
Sbjct: 175 LFDLMPREMKNLISWNSLISGYAQT---SEGVDIASKLFAE--MPEK----DLIS----- 220
Query: 301 MAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALI 360
++I Y GRI A+ F++ + + +W +I
Sbjct: 221 ------------------------WNSMIDGYVKHGRIEDAKDLFDMVPRRDVVTWATMI 256
Query: 361 AGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGM-VDAGVKPNE 419
G+ + G + A+ LF+ M RDV ++++M++GY QN ALE+F M ++ + P+E
Sbjct: 257 DGYAKLGFVHQAKTLFDQMPHRDVVAYNSMMAGYVQNRFHMEALEIFSDMEKESHLSPDE 316
Query: 420 ITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYH 479
T+V V AIA G L + H Y++ L L A+IDMY+KCGSI A VF
Sbjct: 317 TTLVIVLSAIAQLGRLSKAMDMHLYIVEKQFLLGGKLGVALIDMYSKCGSIQHAMLVFEG 376
Query: 480 IRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVD 539
I ++ S+ WNA+I GLA+HG + +E+R+IK + ITF+GVL+ C H+GLV
Sbjct: 377 IENK--SIDHWNAMIGGLAIHGLGESAFDMLLQIERRSIKPDDITFVGVLNACSHSGLVK 434
Query: 540 LGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAA 599
G F+ M+ + +EP L+HYGCMVD+L R+G +E A+ +I MP++ + VIW T L A
Sbjct: 435 EGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPIEPNDVIWRTFLTA 494
Query: 600 SRIHGNVEVGERAAKSLAGLQPSHGPSR-VLLSNIYADAGRWEDAFSIRKEMRDCGMKRL 658
H E GE AK L LQ + PS VLLSN+YA G W+D +R M++ ++++
Sbjct: 495 CSHHKEFETGELVAKHLI-LQADYNPSSYVLLSNMYASFGMWKDVRRVRTMMKERKIEKI 553
Query: 659 PGFSGV 664
PG S +
Sbjct: 554 PGCSWI 559
Score = 122 bits (305), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 110/420 (26%), Positives = 187/420 (44%), Gaps = 72/420 (17%)
Query: 26 LVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCS 85
L+S S + S+G I S +F E + NS+I+ Y K G I AK +FD
Sbjct: 186 LISWNSLISGYAQTSEGVDIASKLFAEMPEKDLISWNSMIDGYVKHGRIEDAKDLFDMVP 245
Query: 86 TLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRD 145
D V MI GY + ++ A+ +FD+ P + V+Y SM+ G+ QN EALE+F D
Sbjct: 246 RRDVVTWATMIDGYAKLGFVHQAKTLFDQMPHRDVVAYNSMMAGYVQNRFHMEALEIFSD 305
Query: 146 M-RILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVI--KLMIDGFVIISTNLLNMYCV 202
M + + P+E TL V+S+ LG + + +H ++ + ++ G + ++ L++MY
Sbjct: 306 MEKESHLSPDETTLVIVLSAIAQLGRLSKAMDMHLYIVEKQFLLGGKLGVA--LIDMYSK 363
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
C S+ A +F+ ++ ++I WN M+ G A GL E A D
Sbjct: 364 CGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESA------------------FDML 405
Query: 263 LQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD 322
LQ+ER S I P+D+ V +++AC HS +VK G C++
Sbjct: 406 LQIERRS-------------IKPDDITFVGVLNACS-----------HSGLVKEGLLCFE 441
Query: 323 FIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNM--Q 380
++ + I+ + + ++ R+G IE A+ L M +
Sbjct: 442 LMRR-------------------KHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPIE 482
Query: 381 KRDVYSWSAMISGYAQNEQPNMA-LELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGR 439
DV W ++ + +++ L H ++ A P+ ++S AS G K+ R
Sbjct: 483 PNDVI-WRTFLTACSHHKEFETGELVAKHLILQADYNPSSYVLLSNM--YASFGMWKDVR 539
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 109/391 (27%), Positives = 182/391 (46%), Gaps = 35/391 (8%)
Query: 236 LVELARELFERI----PSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIV 291
L E AR +F +D W MI + AL ++ ML G+ + +
Sbjct: 32 LAEFARFVFHEYHYGGEVEDPYLWNAMIKSHSHGTDPRRALLLFCLMLEIGVPVDKFSLS 91
Query: 292 DLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKD 351
++ AC R GLQIH + K G F+Q +I Y CG + AR F+ +
Sbjct: 92 LVMKACSRLGFVKGGLQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGFARQIFDRMPQR 151
Query: 352 HIASWNALIAGFIRNGMIEDARQLFNNMQK--RDVYSWSAMISGYAQ-NEQPNMALELFH 408
S+N++I G+++ G IE A +LF+ M + +++ SW+++ISGYAQ +E ++A +LF
Sbjct: 152 DSVSYNSMIDGYVKCGSIESASELFDLMPREMKNLISWNSLISGYAQTSEGVDIASKLFA 211
Query: 409 GMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLS-AAIIDMYAKC 467
M E ++S I G +K GR L + + D ++ A +ID YAK
Sbjct: 212 EM-------PEKDLISWNSMI--DGYVKHGRIEDAKDLFDMVPRRDVVTWATMIDGYAKL 262
Query: 468 GSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKR-NIKLNSITFI 526
G ++ A +F + R V +N+++ G + L+I+SD+EK ++ + T +
Sbjct: 263 GFVHQAKTLFDQMPHR--DVVAYNSMMAGYVQNRFHMEALEIFSDMEKESHLSPDETTLV 320
Query: 527 GVLSTCCHAGLVDLGERYFKSMK-SVYNVEPDLKHYG----CMVDLLGRAGQLEDAEEVI 581
VLS G R K+M +Y VE G ++D+ + G ++ A V
Sbjct: 321 IVLSAIAQLG------RLSKAMDMHLYIVEKQFLLGGKLGVALIDMYSKCGSIQHAMLVF 374
Query: 582 RSMPMKADVVIWGTLLAASRIHGNVEVGERA 612
+ K+ + W ++ IHG +GE A
Sbjct: 375 EGIENKS-IDHWNAMIGGLAIHG---LGESA 401
>gi|297793123|ref|XP_002864446.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297310281|gb|EFH40705.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 531
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 169/443 (38%), Positives = 263/443 (59%), Gaps = 17/443 (3%)
Query: 232 AKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERL---SEALTMYRAMLCDGIAPNDV 288
+ AG + A +F P + TMI V+ S A+T+YR P+
Sbjct: 58 SNAGHLRYAYSVFTHQPFPNTYLHNTMIRALSLVDERNAHSIAITVYRKFWAFCAKPDTF 117
Query: 289 MIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQF-EL 347
++ R G Q+H V GFD + +I Y++CG + AR F E+
Sbjct: 118 TFPFVLKIVVRVSDVWFGRQVHGQAVVFGFDSSVHVVTGLIQMYSSCGGLGDARKVFDEM 177
Query: 348 GIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ--KRDVYSWSAMISGYAQNEQPNMALE 405
++D + WNAL+AG+ + G +++AR L M R+ SW+ +ISGYA++ + + A+E
Sbjct: 178 RVRD-VNVWNALLAGYGKVGEMDEARGLLEMMPCWVRNAVSWTCVISGYARSGRASEAIE 236
Query: 406 LFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYV----LNNSITLNDNLSAAII 461
+F M+ V P+E+T+++V A A G+L+ G YV +N +++LN+ A+I
Sbjct: 237 VFQRMLMENVDPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNN----AVI 292
Query: 462 DMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLN 521
DMYAK G+I A EVF + +R +V W II GLA HG L ++ + K +K N
Sbjct: 293 DMYAKSGNITKALEVFESVNER--NVVTWTTIITGLATHGHGAEALVMFDRMVKAGVKPN 350
Query: 522 SITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVI 581
+TFI +LS C H G VDLG R+F SM+S Y + P+++HYGCM+DLLGRAG+L +AEEVI
Sbjct: 351 DVTFIAILSACSHVGWVDLGNRFFNSMRSKYGINPNIEHYGCMIDLLGRAGKLREAEEVI 410
Query: 582 RSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWE 641
+SMP +++ IWG+LLAAS +H +++VGERA L L+P++ + +LL+N+Y++ GRW+
Sbjct: 411 KSMPFESNAAIWGSLLAASNVHHDIDVGERALYQLIKLEPNNSGNYMLLANLYSNLGRWD 470
Query: 642 DAFSIRKEMRDCGMKRLPGFSGV 664
++ +RK M+ G+K+L G S +
Sbjct: 471 ESRMMRKMMKGIGVKKLAGESSI 493
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 112/441 (25%), Positives = 194/441 (43%), Gaps = 54/441 (12%)
Query: 86 TLDPVACNIMISGYIRNDRLNDAR---------------EVFDKTPIKCCVSYTSMIMGF 130
TL C ++I+G R D LN A+ VF P + +MI
Sbjct: 30 TLKQSHCFMIITGLNR-DNLNVAKFIEACSNAGHLRYAYSVFTHQPFPNTYLHNTMIRAL 88
Query: 131 A---QNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMID 187
+ + + A+ V+R P+ T V+ V + +W R +HG + D
Sbjct: 89 SLVDERNAHSIAITVYRKFWAFCAKPDTFTFPFVLKIVVRVSDVWFGRQVHGQAVVFGFD 148
Query: 188 GFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERI 247
V + T L+ MY C L +AR +FDEM+ R++ WN +L G+ K G ++ AR L E +
Sbjct: 149 SSVHVVTGLIQMYSSCGGLGDARKVFDEMRVRDVNVWNALLAGYGKVGEMDEARGLLEMM 208
Query: 248 PS--KDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGE 305
P ++ VSW +I GY + R SEA+ +++ ML + + P++V ++ ++SAC +
Sbjct: 209 PCWVRNAVSWTCVISGYARSGRASEAIEVFQRMLMENVDPDEVTLLAVLSACADLGSLEL 268
Query: 306 GLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIR 365
G +I S + G + + +I YA G I A FE + ++ +W +I G
Sbjct: 269 GERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALEVFESVNERNVVTWTTIITGLAT 328
Query: 366 NGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSV 425
+G + AL +F MV AGVKPN++T +++
Sbjct: 329 HGHGAE-------------------------------ALVMFDRMVKAGVKPNDVTFIAI 357
Query: 426 FCAIASSGTLKEG-RWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRT 484
A + G + G R+ + I N +ID+ + G + A EV + +
Sbjct: 358 LSACSHVGWVDLGNRFFNSMRSKYGINPNIEHYGCMIDLLGRAGKLREAEEVIKSMPFES 417
Query: 485 TSVSPWNAIICGLAMHGDANL 505
+ + W +++ +H D ++
Sbjct: 418 NA-AIWGSLLAASNVHHDIDV 437
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 128/258 (49%), Gaps = 33/258 (12%)
Query: 42 GQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIR 101
G+Q+H G +S+ + LI +Y+ CG + A+ +FD D N +++GY +
Sbjct: 135 GRQVHGQAVVFGFDSSVHVVTGLIQMYSSCGGLGDARKVFDEMRVRDVNVWNALLAGYGK 194
Query: 102 NDRLNDAREVFDKTP--IKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLA 159
+++AR + + P ++ VS+T +I G+A++ EA+EVF+ M + V P+EVTL
Sbjct: 195 VGEMDEARGLLEMMPCWVRNAVSWTCVISGYARSGRASEAIEVFQRMLMENVDPDEVTLL 254
Query: 160 SVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKER 219
+V+S+ LG + + V ++ V ++ +++MY ++ +A +F+ + ER
Sbjct: 255 AVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALEVFESVNER 314
Query: 220 NIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAML 279
N+V+W ++ G A G +EAL M+ M+
Sbjct: 315 NVVTWTTIITGLATHG-------------------------------HGAEALVMFDRMV 343
Query: 280 CDGIAPNDVMIVDLISAC 297
G+ PNDV + ++SAC
Sbjct: 344 KAGVKPNDVTFIAILSAC 361
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 78/160 (48%), Gaps = 32/160 (20%)
Query: 13 QKANLQNSDY-ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKC 71
Q+ ++N D E+ L++ L C+ ++ G++I S + G+ + N++I++YAK
Sbjct: 239 QRMLMENVDPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKS 298
Query: 72 GLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFA 131
G I++A +F+S + RN V++T++I G A
Sbjct: 299 GNITKALEVFESVNE--------------RN-----------------VVTWTTIITGLA 327
Query: 132 QNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGI 171
+ EAL +F M GV PN+VT +++S+ H+G +
Sbjct: 328 THGHGAEALVMFDRMVKAGVKPNDVTFIAILSACSHVGWV 367
>gi|225423995|ref|XP_002279343.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 623
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 174/486 (35%), Positives = 250/486 (51%), Gaps = 65/486 (13%)
Query: 240 ARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGR 299
AR+LF++IP ++ W +M GY Q E E + ++ M I PN ++ +CG+
Sbjct: 89 ARQLFDQIPDPNIALWNSMFRGYAQSESYREVVFLFFQMKGMDIRPNCFTFPVVLKSCGK 148
Query: 300 AMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRIN-------------------- 339
A EG Q+H ++K GF F+ T+I Y+A G +
Sbjct: 149 INALIEGEQVHCFLIKCGFRGNPFVGTTLIDMYSAGGTVGDAYKIFCEMFERNVVAWTSM 208
Query: 340 -----------LARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDV---- 384
AR F+L + + WN +++G+I G + +AR+LF+ M RDV
Sbjct: 209 INGYILSADLVSARRLFDLAPERDVVLWNIMVSGYIEGGDMVEARKLFHEMPNRDVMFWN 268
Query: 385 ---------------------------YSWSAMISGYAQNEQPNMALELFHGMV-DAGVK 416
+SW+A+I GYA N L F M+ ++ V
Sbjct: 269 TVLKGYATNGNVEALEGLFEEMPERNIFSWNALIGGYAHNGLFFEVLGSFKRMLSESDVP 328
Query: 417 PNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEV 476
PN+ T+V+V A A G L G+W H Y ++ + N + A++DMYAKCG I A V
Sbjct: 329 PNDATLVTVLSACARLGALDLGKWVHVYAESSGLKGNVYVGNALMDMYAKCGIIENAISV 388
Query: 477 FYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAG 536
F + T + WN +I GLAMH L ++ ++ K + ITFIG+L C H G
Sbjct: 389 FRGMD--TKDLISWNTLIGGLAMHSRGADALNLFFQMKNAGQKPDGITFIGILCACTHMG 446
Query: 537 LVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTL 596
LV+ G YF+SM Y + P ++HYGCMVD+L RAG+LE A +R MP++AD VIW L
Sbjct: 447 LVEDGFAYFQSMADDYLIMPQIEHYGCMVDMLARAGRLEQAMAFVRKMPVEADGVIWAGL 506
Query: 597 LAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMK 656
L A RI+ NVE+ E A + L L+P + + V+LSNIY DAGRWED ++ MRD G K
Sbjct: 507 LGACRIYKNVELAELALQRLIELEPKNPANYVMLSNIYGDAGRWEDVARLKVAMRDTGFK 566
Query: 657 RLPGFS 662
+LPG S
Sbjct: 567 KLPGCS 572
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 135/538 (25%), Positives = 236/538 (43%), Gaps = 85/538 (15%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E +S L+ C Q QI + I +G + N +I L+ +
Sbjct: 38 EERFISLLQSCKTS---KQVHQIQAQIIANGFQYNEYITPKLVTI--------------- 79
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
C+TL R+ AR++FD+ P + SM G+AQ++ +RE + +
Sbjct: 80 -CATLK---------------RMTYARQLFDQIPDPNIALWNSMFRGYAQSESYREVVFL 123
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
F M+ + + PN T V+ S + + E +H +IK G + T L++MY
Sbjct: 124 FFQMKGMDIRPNCFTFPVVLKSCGKINALIEGEQVHCFLIKCGFRGNPFVGTTLIDMYSA 183
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
++ +A +F EM ERN+V+W M+NG+ + + AR LF+ P +DVV W M+ GY
Sbjct: 184 GGTVGDAYKIFCEMFERNVVAWTSMINGYILSADLVSARRLFDLAPERDVVLWNIMVSGY 243
Query: 263 LQVERLSEALTMYRAMLCDGIAPN-DVMIVDLI----SACGRAMAFGEGL-------QIH 310
++ + EA ++ M PN DVM + + + G A EGL I
Sbjct: 244 IEGGDMVEARKLFHEM------PNRDVMFWNTVLKGYATNGNVEAL-EGLFEEMPERNIF 296
Query: 311 SIIVKAGFDCYDFI--------------------QATIIHFYAACGRINLARLQFEL--- 347
S G ++ + AT++ +AC R+ L +
Sbjct: 297 SWNALIGGYAHNGLFFEVLGSFKRMLSESDVPPNDATLVTVLSACARLGALDLGKWVHVY 356
Query: 348 ----GIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMA 403
G+K ++ NAL+ + + G+IE+A +F M +D+ SW+ +I G A + + A
Sbjct: 357 AESSGLKGNVYVGNALMDMYAKCGIIENAISVFRGMDTKDLISWNTLIGGLAMHSRGADA 416
Query: 404 LELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLND-NLSAAIID 462
L LF M +AG KP+ IT + + CA G +++G + + ++ + + ++D
Sbjct: 417 LNLFFQMKNAGQKPDGITFIGILCACTHMGLVEDGFAYFQSMADDYLIMPQIEHYGCMVD 476
Query: 463 MYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGD---ANLTLKIYSDLEKRN 517
M A+ G + A + V W ++ ++ + A L L+ +LE +N
Sbjct: 477 MLARAGRLEQAMAFVRKMPVEADGVI-WAGLLGACRIYKNVELAELALQRLIELEPKN 533
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/303 (21%), Positives = 112/303 (36%), Gaps = 74/303 (24%)
Query: 308 QIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNG 367
QI + I+ GF ++I ++ A R+ AR F+ +IA WN+
Sbjct: 56 QIQAQIIANGFQYNEYITPKLVTICATLKRMTYARQLFDQIPDPNIALWNS--------- 106
Query: 368 MIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFC 427
M GYAQ+E + LF M ++PN T V
Sbjct: 107 ----------------------MFRGYAQSESYREVVFLFFQMKGMDIRPNCFTFPVVLK 144
Query: 428 AIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSV 487
+ L EG H +++ N + +IDMY+ G++ A+++F + +R +V
Sbjct: 145 SCGKINALIEGEQVHCFLIKCGFRGNPFVGTTLIDMYSAGGTVGDAYKIFCEMFER--NV 202
Query: 488 SPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKS 547
W ++I G + D +++ +R++ L +I G +
Sbjct: 203 VAWTSMINGYILSADLVSARRLFDLAPERDVVLWNIMVSGYIE----------------- 245
Query: 548 MKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVE 607
G + +A ++ MP + DV+ W T+L +GNVE
Sbjct: 246 -----------------------GGDMVEARKLFHEMPNR-DVMFWNTVLKGYATNGNVE 281
Query: 608 VGE 610
E
Sbjct: 282 ALE 284
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 123/302 (40%), Gaps = 71/302 (23%)
Query: 6 FHSVFNSQKANLQNSDY---ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQN 62
F V S K L SD + LV+ L C+ A+ G+ +H SGL+ N ++ N
Sbjct: 311 FFEVLGSFKRMLSESDVPPNDATLVTVLSACARLGALDLGKWVHVYAESSGLKGNVYVGN 370
Query: 63 SLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVS 122
+L+++YAKCG+I A S+F T D ++ N +I G + R D
Sbjct: 371 ALMDMYAKCGIIENAISVFRGMDTKDLISWNTLIGGLAMHSRGAD--------------- 415
Query: 123 YTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVI 182
AL +F M+ G P+ +T ++ + H+G
Sbjct: 416 ----------------ALNLFFQMKNAGQKPDGITFIGILCACTHMG------------- 446
Query: 183 KLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARE 242
L+ DGF + + + Y + I + M++ A+AG +E A
Sbjct: 447 -LVEDGFAYFQS-MADDYLIMP---------------QIEHYGCMVDMLARAGRLEQAMA 489
Query: 243 LFERIPSK-DVVSWGTMIDG---YLQVERLSEALTMYRAMLCDGIAP-NDVMIVDLISAC 297
++P + D V W ++ Y VE L+E L + R + + P N VM+ ++
Sbjct: 490 FVRKMPVEADGVIWAGLLGACRIYKNVE-LAE-LALQRLIELEPKNPANYVMLSNIYGDA 547
Query: 298 GR 299
GR
Sbjct: 548 GR 549
>gi|224120114|ref|XP_002318245.1| predicted protein [Populus trichocarpa]
gi|222858918|gb|EEE96465.1| predicted protein [Populus trichocarpa]
Length = 513
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 175/540 (32%), Positives = 280/540 (51%), Gaps = 68/540 (12%)
Query: 122 SYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLV 181
+ +++ G+A D + A V+R + G +P+ T +V+ S GI E R +HG++
Sbjct: 1 PFNALVSGYAIGDRPKTAFLVYRRIVKDGFLPDMFTFPAVLKSCAKFVGIGEGRQVHGVI 60
Query: 182 IKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELAR 241
IK+ + + +L++ Y VC +A +FDEM R
Sbjct: 61 IKMGFVCNIYVENSLVHFYSVCKRFGDASRVFDEMLVR---------------------- 98
Query: 242 ELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAM 301
DVVSW +I GY++ EA+ ++ M + PN V ++ ACGR
Sbjct: 99 ---------DVVSWTGVISGYVRAGLFDEAVGLFLRM---DVEPNAATFVSVLVACGRKG 146
Query: 302 AFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIA 361
G IH + K+ F G+ ++ NAL+
Sbjct: 147 YLSVGKGIHGLSFKSAF-----------------------------GVGLEVS--NALMD 175
Query: 362 GFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEIT 421
+++ G + A+Q+F+ + ++D+ SW+++ISG Q P ALELF M +G++P+ I
Sbjct: 176 MYVKCGCLPGAKQVFDELAEKDIVSWTSIISGLVQCNCPKEALELFQDMQSSGIEPDGII 235
Query: 422 MVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIR 481
+ SV A A G L GRW HE++ +I + + A++DMYAKCG I + ++F +
Sbjct: 236 LTSVLSACARLGALDYGRWVHEHIDRKAIKWDIQIGTAMVDMYAKCGCIEMSMQIFNGMP 295
Query: 482 DRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLG 541
+ +V WNA++ GLAMHG A L+++ ++ + ++ N +TF+ +L+ CCH GLV+ G
Sbjct: 296 HK--NVLTWNALLNGLAMHGHAYKVLELFEEMVRVGMRPNEVTFLAILTACCHCGLVNEG 353
Query: 542 ERYFKSMK-SVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAAS 600
+YF MK YN+ P L+HYGCMVDLL RA L++A E+ ++MPM DV I G LL+A
Sbjct: 354 RQYFNWMKGQQYNLPPRLEHYGCMVDLLCRARLLDEALELTKAMPMSPDVRIMGALLSAC 413
Query: 601 RIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPG 660
+ +GN E+ + L VLLSNI+A RW+D IR+ M++ G+K+ PG
Sbjct: 414 KENGNTELPQEILDRFVELDSHDSGVYVLLSNIHAINQRWDDVTRIRRLMKEKGIKKPPG 473
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 110/497 (22%), Positives = 199/497 (40%), Gaps = 103/497 (20%)
Query: 28 SALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTL 87
+ L+ C+ + + +G+Q+H +I K G N +++NSL++ Y+ C A +FD
Sbjct: 39 AVLKSCAKFVGIGEGRQVHGVIIKMGFVCNIYVENSLVHFYSVCKRFGDASRVFDEMLVR 98
Query: 88 DPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMR 147
D V+ +ISGY+R ++A +F + ++
Sbjct: 99 DVVSWTGVISGYVRAGLFDEAVGLFLRMDVE----------------------------- 129
Query: 148 ILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLV 207
PN T SV+ + G + + +HGL K + +S L++MY C L
Sbjct: 130 -----PNAATFVSVLVACGRKGYLSVGKGIHGLSFKSAFGVGLEVSNALMDMYVKCGCLP 184
Query: 208 EARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVER 267
A+ +FDE+ E++IVSW +++G +Q
Sbjct: 185 GAKQVFDELAEKDIVSWTSIISGL-------------------------------VQCNC 213
Query: 268 LSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQAT 327
EAL +++ M GI P+ +++ ++SAC R A G +H I + I
Sbjct: 214 PKEALELFQDMQSSGIEPDGIILTSVLSACARLGALDYGRWVHEHIDRKAIKWDIQIGTA 273
Query: 328 IIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSW 387
++ YA CG I ++ F ++ +WNAL+ G +G
Sbjct: 274 MVDMYAKCGCIEMSMQIFNGMPHKNVLTWNALLNGLAMHG-------------------- 313
Query: 388 SAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLN 447
LELF MV G++PNE+T +++ A G + EGR ++
Sbjct: 314 -----------HAYKVLELFEEMVRVGMRPNEVTFLAILTACCHCGLVNEGRQYFNWMKG 362
Query: 448 NSITLNDNLS--AAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANL 505
L L ++D+ + ++ A E+ + +SP I+ L N
Sbjct: 363 QQYNLPPRLEHYGCMVDLLCRARLLDEALEL-----TKAMPMSPDVRIMGALLSACKENG 417
Query: 506 TLKIYSDLEKRNIKLNS 522
++ ++ R ++L+S
Sbjct: 418 NTELPQEILDRFVELDS 434
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 125/284 (44%), Gaps = 62/284 (21%)
Query: 25 ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSC 84
VS L C +S G+ IH L FKS + N+L+++Y KCG + AK
Sbjct: 134 TFVSVLVACGRKGYLSVGKGIHGLSFKSAFGVGLEVSNALMDMYVKCGCLPGAK------ 187
Query: 85 STLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFR 144
+VFD+ K VS+TS+I G Q +C +EALE+F+
Sbjct: 188 -------------------------QVFDELAEKDIVSWTSIISGLVQCNCPKEALELFQ 222
Query: 145 DMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCS 204
DM+ G+ P+ + L SV+S+ LG + R +H + + I + I T +++MY C
Sbjct: 223 DMQSSGIEPDGIILTSVLSACARLGALDYGRWVHEHIDRKAIKWDIQIGTAMVDMYAKCG 282
Query: 205 SLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQ 264
+ + +F+ M +N+++WN +LNG A G ELFE
Sbjct: 283 CIEMSMQIFNGMPHKNVLTWNALLNGLAMHGHAYKVLELFEE------------------ 324
Query: 265 VERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQ 308
M+ G+ PN+V + +++AC EG Q
Sbjct: 325 -------------MVRVGMRPNEVTFLAILTACCHCGLVNEGRQ 355
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 53/247 (21%), Positives = 105/247 (42%), Gaps = 47/247 (19%)
Query: 16 NLQNSDYE---LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCG 72
++Q+S E + L S L C+ A+ G+ +H I + ++ + I +++++YAKCG
Sbjct: 223 DMQSSGIEPDGIILTSVLSACARLGALDYGRWVHEHIDRKAIKWDIQIGTAMVDMYAKCG 282
Query: 73 LISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQ 132
I + ++F+ P K +++ +++ G A
Sbjct: 283 CIEMSM-------------------------------QIFNGMPHKNVLTWNALLNGLAM 311
Query: 133 NDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVII 192
+ + LE+F +M +G+ PNEVT +++++ H G + E R + + +
Sbjct: 312 HGHAYKVLELFEEMVRVGMRPNEVTFLAILTACCHCGLVNEGRQYFNWMKGQQYN----L 367
Query: 193 STNLLNMYCVCSSLVEARSLFDEMKE--------RNIVSWNVMLNGFAKAGLVELARELF 244
L + C+ L AR L DE E ++ +L+ + G EL +E+
Sbjct: 368 PPRLEHYGCMVDLLCRAR-LLDEALELTKAMPMSPDVRIMGALLSACKENGNTELPQEIL 426
Query: 245 ERIPSKD 251
+R D
Sbjct: 427 DRFVELD 433
>gi|297737195|emb|CBI26396.3| unnamed protein product [Vitis vinifera]
Length = 667
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 181/656 (27%), Positives = 330/656 (50%), Gaps = 102/656 (15%)
Query: 10 FNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYA 69
+S + + S++ V L+ C+ ++ ++HS I +G +++ F+Q +L+++Y+
Sbjct: 17 LSSHTSGVHGSEFTFPFV--LKACAKLPSLEDATKLHSHILLTGFQAHVFVQTALVDVYS 74
Query: 70 KCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMG 129
KC C + AR VFD+ PIK VS+ S+I
Sbjct: 75 KC-------------------CC------------FHSARLVFDQMPIKSLVSWNSIISA 103
Query: 130 FAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGF 189
++ ++ + + M++LG+ + T ++S G+ +HG + KL +D
Sbjct: 104 HCRDFHIDQSFGILKQMQLLGLELSSATFTGFLASCSLPQGL----SIHGYITKLGLDLH 159
Query: 190 VIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPS 249
+ ++ ++++MY + LN ++ A +F +
Sbjct: 160 LPLANSIMSMY-------------------------IRLNQ------IDGALSVFYTLHQ 188
Query: 250 KDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQI 309
K +VSW ++ GYL +++ ++ M C + P+ ++ V+LIS C + + +
Sbjct: 189 KSIVSWTIILGGYLSAGDVAKVFAVFNQMRCQCVGPDSIVFVNLISCCKLSGNLLLAMLV 248
Query: 310 HSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMI 369
HS+++K+GFD D I ++ YA C KD ++
Sbjct: 249 HSLLLKSGFDHKDPIDNLLVAMYAKC--------------KDLVS--------------- 279
Query: 370 EDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAI 429
AR++F+ + ++ V+ W++MISGYAQ PN AL LF+ ++ +PNE+T+ +V A
Sbjct: 280 --ARRVFDAVHEKSVFLWTSMISGYAQFGYPNEALHLFNMLLRTASRPNELTLATVLSAC 337
Query: 430 ASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSP 489
A G+L+ G +Y+L N + + + ++I M+ KCGSI A +F I ++ +V
Sbjct: 338 AEMGSLRMGEEIEQYILLNGLGSDLRVQTSLIHMFCKCGSIKKAQALFERIPNKDLAV-- 395
Query: 490 WNAIICGLAMHGDANLTLKIYSDLEKR-NIKLNSITFIGVLSTCCHAGLVDLGERYFKSM 548
W+A+I G A+HG L ++ ++ IK ++I + VL C H+GL++ G +YF+SM
Sbjct: 396 WSAMINGYAVHGMGKEALNLFHKMQNEVGIKPDAIVYTSVLLACSHSGLIEDGLKYFRSM 455
Query: 549 KSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEV 608
+ + +EP ++HY C+VDLLGRAG +E A I+ MP+ +W L+A H N+E+
Sbjct: 456 QKDFGIEPSIQHYSCLVDLLGRAGYVELALRTIQEMPVLVQARVWAPFLSACYTHHNLEL 515
Query: 609 GERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
GE AAK+L L+P + VL++N+Y G+W++A R + G+ + PG+S +
Sbjct: 516 GEFAAKNLFDLEPRSTGNFVLMTNLYTSMGKWKEAAKARSIINARGLVKEPGWSQI 571
>gi|449461217|ref|XP_004148338.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Cucumis sativus]
Length = 619
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 179/548 (32%), Positives = 278/548 (50%), Gaps = 71/548 (12%)
Query: 122 SYTSMIMGFAQNDCWRE---ALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLH 178
S+ MI G + W + ALE + M+ LG+ PN +T + + +L + RM H
Sbjct: 93 SFNVMIRGLST--AWNKSSLALEFYSRMKFLGLKPNNLTYPFLFIACSNLLAVENGRMGH 150
Query: 179 GLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVE 238
VI+ +D +S +L+ MY C + +AR
Sbjct: 151 CSVIRRGLDEDGHVSHSLITMYARCGKMGDAR---------------------------- 182
Query: 239 LARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACG 298
++F+ I KD+VSW +MI GY ++ EA+ ++R M+ G PN++ +V ++ ACG
Sbjct: 183 ---KVFDEISQKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMSLVSVLGACG 239
Query: 299 RAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNA 358
G + +V+ F+ + +IH Y CG +
Sbjct: 240 ELGDLKLGTWVEEFVVENKMTLNYFMGSALIHMYGKCGDL-------------------- 279
Query: 359 LIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPN 418
AR++F++M+K+D +W+AMI+GYAQN A++LF M + P+
Sbjct: 280 -----------VSARRIFDSMKKKDKVTWNAMITGYAQNGMSEEAIKLFQDMRMSSTAPD 328
Query: 419 EITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFY 478
+IT++ + A AS G L G+ Y + + A++DMYAKCGS++ AF VFY
Sbjct: 329 QITLIGILSACASIGALDLGKQVEIYASERGFQDDVYVGTALVDMYAKCGSLDNAFRVFY 388
Query: 479 HIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDL--EKRNIKLNSITFIGVLSTCCHAG 536
+ ++ VS WNA+I LA HG A L ++ + E + N ITF+GVLS C HAG
Sbjct: 389 GMPNKN-EVS-WNAMISALAFHGQAQEALALFKSMMNEGGTVSPNDITFVGVLSACVHAG 446
Query: 537 LVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTL 596
LVD G R F M S + + P ++HY CMVDL RAG LE+A + + +MP K D VI G L
Sbjct: 447 LVDEGRRLFHMMSSSFGLVPKIEHYSCMVDLFSRAGHLEEAWDFVMTMPEKPDEVILGAL 506
Query: 597 LAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMK 656
L A + N+++ ER K L L+PS+ + V+ S +YA+ RW+D+ +R M+ G+
Sbjct: 507 LGACQKRKNIDISERVMKLLLELEPSNSGNYVISSKLYANLRRWDDSARMRMLMKQKGVS 566
Query: 657 RLPGFSGV 664
+ PG S +
Sbjct: 567 KTPGCSWI 574
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 115/460 (25%), Positives = 203/460 (44%), Gaps = 100/460 (21%)
Query: 33 CSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVAC 92
CS +AV G+ H + + GL+ + + +SLI +YA+CG
Sbjct: 137 CSNLLAVENGRMGHCSVIRRGLDEDGHVSHSLITMYARCG-------------------- 176
Query: 93 NIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVI 152
++ DAR+VFD+ K VS+ SMI G+++ EA+ +FR+M G
Sbjct: 177 -----------KMGDARKVFDEISQKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQ 225
Query: 153 PNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSL 212
PNE++L SV+ + C L L + ++ FV+ + LN Y + S+L+
Sbjct: 226 PNEMSLVSVLGA---------CGELGDLKLGTWVEEFVVENKMTLN-YFMGSALIHM--- 272
Query: 213 FDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEAL 272
+ K G + AR +F+ + KD V+W MI GY Q EA+
Sbjct: 273 ------------------YGKCGDLVSARRIFDSMKKKDKVTWNAMITGYAQNGMSEEAI 314
Query: 273 TMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFY 332
+++ M AP+ + ++ ++SAC A G Q+ + GF ++ ++ Y
Sbjct: 315 KLFQDMRMSSTAPDQITLIGILSACASIGALDLGKQVEIYASERGFQDDVYVGTALVDMY 374
Query: 333 AACGRI-NLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMI 391
A CG + N R+ + + K+ + SWNA+I+ +G
Sbjct: 375 AKCGSLDNAFRVFYGMPNKNEV-SWNAMISALAFHG------------------------ 409
Query: 392 SGYAQNEQPNMALELFHGMVDAG--VKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNS 449
Q AL LF M++ G V PN+IT V V A +G + EGR +++++S
Sbjct: 410 -------QAQEALALFKSMMNEGGTVSPNDITFVGVLSACVHAGLVDEGRRLF-HMMSSS 461
Query: 450 ITLNDNLS--AAIIDMYAKCGSINTAFEVFYHIRDRTTSV 487
L + + ++D++++ G + A++ + ++ V
Sbjct: 462 FGLVPKIEHYSCMVDLFSRAGHLEEAWDFVMTMPEKPDEV 501
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 130/293 (44%), Gaps = 64/293 (21%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E++LVS L C + G + + ++ + N F+ ++LI++Y KCG + A+ +FD
Sbjct: 228 EMSLVSVLGACGELGDLKLGTWVEEFVVENKMTLNYFMGSALIHMYGKCGDLVSARRIFD 287
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
S D V N MI+GY AQN EA+++
Sbjct: 288 SMKKKDKVTWNAMITGY-------------------------------AQNGMSEEAIKL 316
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
F+DMR+ P+++TL ++S+ +G + + + + V + T L++MY
Sbjct: 317 FQDMRMSSTAPDQITLIGILSACASIGALDLGKQVEIYASERGFQDDVYVGTALVDMYAK 376
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
C SL A +F M +N VSWN M++ A G +
Sbjct: 377 CGSLDNAFRVFYGMPNKNEVSWNAMISALAFHGQAQ------------------------ 412
Query: 263 LQVERLSEALTMYRAMLCDG--IAPNDVMIVDLISACGRAMAFGEGLQIHSII 313
EAL ++++M+ +G ++PND+ V ++SAC A EG ++ ++
Sbjct: 413 -------EALALFKSMMNEGGTVSPNDITFVGVLSACVHAGLVDEGRRLFHMM 458
>gi|357480155|ref|XP_003610363.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355511418|gb|AES92560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 734
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 187/624 (29%), Positives = 299/624 (47%), Gaps = 95/624 (15%)
Query: 39 VSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISG 98
V G+Q HS+ K+G + ++ +SL+N+Y K G +
Sbjct: 134 VVAGKQAHSVAVKTGCSGDVYVGSSLLNMYCKTGFVF----------------------- 170
Query: 99 YIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTL 158
DAR++FD+ P + VS+ +MI G+A +D +A+EVF MR I NE L
Sbjct: 171 --------DARKLFDRMPERNTVSWATMISGYASSDIADKAVEVFELMRREEEIQNEFAL 222
Query: 159 ASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKE 218
SV+S+ ++ R +H L IK + V ++ L+ MY C SL +A F+ +
Sbjct: 223 TSVLSALTSDVFVYTGRQVHSLAIKNGLLAIVSVANALVTMYAKCGSLDDAVRTFEFSGD 282
Query: 219 RNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAM 278
+N ++W+ M+ G+A+ G + A +LF ++ S
Sbjct: 283 KNSITWSAMVTGYAQGGDSDKALKLFNKMHSS---------------------------- 314
Query: 279 LCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRI 338
G+ P++ +V +I+AC A EG Q+HS K GF ++ + ++ YA CG +
Sbjct: 315 ---GVLPSEFTLVGVINACSDLCAVVEGKQMHSFAFKLGFGLQLYVLSAVVDMYAKCGSL 371
Query: 339 NLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNE 398
AR FE + + W ++I G+++NG E L+ MQ V
Sbjct: 372 ADARKGFECVQQPDVVLWTSIITGYVQNGDYEGGLNLYGKMQMERVI------------- 418
Query: 399 QPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSA 458
PNE+TM SV A +S L +G+ H ++ L + +
Sbjct: 419 ------------------PNELTMASVLRACSSLAALDQGKQMHARIIKYGFKLEVPIGS 460
Query: 459 AIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNI 518
A+ MY KCGS++ + +F+ + R V WNA+I GL+ +G N L+++ + I
Sbjct: 461 ALSAMYTKCGSLDDGYLIFWRMPSR--DVISWNAMISGLSQNGHGNKALELFEKMLLEGI 518
Query: 519 KLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAE 578
K + +TF+ +LS C H GLVD G YFK M +N+ P ++HY CMVD+L RAG+L +A+
Sbjct: 519 KPDPVTFVNLLSACSHMGLVDRGWEYFKMMFDEFNIAPMVEHYACMVDILSRAGKLNEAK 578
Query: 579 EVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAG 638
E I S + + +W LL A + H N E+G A + L L + VLLS+IY G
Sbjct: 579 EFIESATVDHGLCLWRILLGACKNHRNYELGVYAGEKLVELGSPESSAYVLLSSIYTALG 638
Query: 639 RWEDAFSIRKEMRDCGMKRLPGFS 662
E+ +R+ M+ G+ + PG S
Sbjct: 639 DRENVERVRRIMKARGVNKEPGCS 662
Score = 157 bits (396), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 115/465 (24%), Positives = 207/465 (44%), Gaps = 99/465 (21%)
Query: 13 QKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCG 72
++ +QN E AL S L ++ + V G+Q+HSL K+GL + + N+L+ +YAKCG
Sbjct: 212 REEEIQN---EFALTSVLSALTSDVFVYTGRQVHSLAIKNGLLAIVSVANALVTMYAKCG 268
Query: 73 LISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQ 132
L+DA F+ + K +++++M+ G+AQ
Sbjct: 269 -------------------------------SLDDAVRTFEFSGDKNSITWSAMVTGYAQ 297
Query: 133 NDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVII 192
+AL++F M GV+P+E TL VI++ L + E + +H KL + +
Sbjct: 298 GGDSDKALKLFNKMHSSGVLPSEFTLVGVINACSDLCAVVEGKQMHSFAFKLGFGLQLYV 357
Query: 193 STNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDV 252
+ +++MY C SL +AR F+ +++ ++V W ++ G+ + G E L+
Sbjct: 358 LSAVVDMYAKCGSLADARKGFECVQQPDVVLWTSIITGYVQNGDYEGGLNLY-------- 409
Query: 253 VSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSI 312
G +Q+ER + PN++ + ++ AC A +G Q+H+
Sbjct: 410 --------GKMQMER---------------VIPNELTMASVLRACSSLAALDQGKQMHAR 446
Query: 313 IVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDA 372
I+K GF I + + Y CG ++ L F + SWNA+I+G +NG
Sbjct: 447 IIKYGFKLEVPIGSALSAMYTKCGSLDDGYLIFWRMPSRDVISWNAMISGLSQNG----- 501
Query: 373 RQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASS 432
N ALELF M+ G+KP+ +T V++ A +
Sbjct: 502 --------------------------HGNKALELFEKMLLEGIKPDPVTFVNLLSACSHM 535
Query: 433 GTLKEGRWAHEYVLNNSITLNDNLS--AAIIDMYAKCGSINTAFE 475
G + G W + ++ + + + A ++D+ ++ G +N A E
Sbjct: 536 GLVDRG-WEYFKMMFDEFNIAPMVEHYACMVDILSRAGKLNEAKE 579
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 106/464 (22%), Positives = 194/464 (41%), Gaps = 74/464 (15%)
Query: 153 PNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSL 212
P L + H I + R LH ++K + ++ LN+Y + L A +L
Sbjct: 9 PQHRQLLQDLIECTHNKNILKGRTLHARILKTGSISSIYVTNTFLNLYAKTNHLSHALTL 68
Query: 213 FDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSE-- 270
FD + + + KD VSW ++I+ + Q S
Sbjct: 69 FDSINDND-----------------------------KDDVSWNSLINAFSQNHSSSSSS 99
Query: 271 -ALTMYRAML-CDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATI 328
A++++R M+ + + PN + + SA G Q HS+ VK G ++ +++
Sbjct: 100 FAISLFRRMMRANNVIPNAHTLAGVFSAASNLSDVVAGKQAHSVAVKTGCSGDVYVGSSL 159
Query: 329 IHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWS 388
++ Y G + AR F+ + + SW +I+G
Sbjct: 160 LNMYCKTGFVFDARKLFDRMPERNTVSWATMISG-------------------------- 193
Query: 389 AMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNN 448
YA ++ + A+E+F M NE + SV A+ S + GR H + N
Sbjct: 194 -----YASSDIADKAVEVFELMRREEEIQNEFALTSVLSALTSDVFVYTGRQVHSLAIKN 248
Query: 449 SITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLK 508
+ +++ A++ MYAKCGS++ A F D+ + W+A++ G A GD++ LK
Sbjct: 249 GLLAIVSVANALVTMYAKCGSLDDAVRTFEFSGDKNSIT--WSAMVTGYAQGGDSDKALK 306
Query: 509 IYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKS-VYNVEPDLKHY--GCMV 565
+++ + + + T +GV++ C V G K M S + + L+ Y +V
Sbjct: 307 LFNKMHSSGVLPSEFTLVGVINACSDLCAVVEG----KQMHSFAFKLGFGLQLYVLSAVV 362
Query: 566 DLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVG 609
D+ + G L DA + + + DVV+W +++ +G+ E G
Sbjct: 363 DMYAKCGSLADARKGFECV-QQPDVVLWTSIITGYVQNGDYEGG 405
>gi|297734524|emb|CBI15771.3| unnamed protein product [Vitis vinifera]
Length = 436
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 156/390 (40%), Positives = 237/390 (60%), Gaps = 5/390 (1%)
Query: 278 MLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGR 337
ML +G P++ ++ AC R +G +IHS +K G F+Q +I +++CG
Sbjct: 1 MLRNGTLPDNYSFPFVLKACARLSLLHKGREIHSSTLKLGVHLDVFVQNALISAFSSCGA 60
Query: 338 INLARLQFEL--GIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYA 395
+ AR F++ + + SWN++I+G++++ E A ++F+ + R+ W++MI+GYA
Sbjct: 61 VEAARAVFDMLPALVRDVVSWNSMISGYLQSHRYELALKVFDRIPHRNTVCWTSMIAGYA 120
Query: 396 QNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDN 455
Q++ A+ELF M G + T+ V A G L +GRW H Y NSI ++ N
Sbjct: 121 QSDLFKEAIELFREMQIGGFAADAATIACVLSACGHWGALAQGRWIHLYCERNSIEMDLN 180
Query: 456 LSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEK 515
A+I MY+KCG I A E+F+ + + W+A+I GLAM+G+++ L ++S +E
Sbjct: 181 ARNALIGMYSKCGDIQKALEIFHGLTQ--PDIFSWSAVISGLAMNGESDKALHLFSQMEM 238
Query: 516 -RNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQL 574
+I+ N ITF+GVL C H G VD G YF +M +YN+ P ++HYGCMVDLLGRA L
Sbjct: 239 ISDIRPNEITFLGVLCACNHGGFVDKGLYYFNAMTQIYNLTPGIEHYGCMVDLLGRANLL 298
Query: 575 EDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIY 634
+AE+ IR++P++ DVVIW +LL A R HGN+E+ E AAK + L+P +RVLLSN+Y
Sbjct: 299 VEAEKFIRTLPIQPDVVIWRSLLFACRNHGNIELAEFAAKQIEELEPRRCGARVLLSNVY 358
Query: 635 ADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
A A RW D +RK+M +K+ PG S V
Sbjct: 359 ASASRWGDVKRVRKDMATQRIKKQPGCSFV 388
Score = 138 bits (348), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 151/289 (52%), Gaps = 34/289 (11%)
Query: 21 DYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSM 80
+Y V L+ C+ + +G++IHS K G+ + F+QN+LI+ ++ CG + A+++
Sbjct: 10 NYSFPFV--LKACARLSLLHKGREIHSSTLKLGVHLDVFVQNALISAFSSCGAVEAARAV 67
Query: 81 FDSCSTL--DPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWRE 138
FD L D V+ N MISGY+++ R A +VFD+ P + V +TSMI G+AQ+D ++E
Sbjct: 68 FDMLPALVRDVVSWNSMISGYLQSHRYELALKVFDRIPHRNTVCWTSMIAGYAQSDLFKE 127
Query: 139 ALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLN 198
A+E+FR+M+I G + T+A V+S+ H G + + R +H + I+ + L+
Sbjct: 128 AIELFREMQIGGFAADAATIACVLSACGHWGALAQGRWIHLYCERNSIEMDLNARNALIG 187
Query: 199 MYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTM 258
MY C + +A +F + + +I SW+ +++G A G + A LF
Sbjct: 188 MYSKCGDIQKALEIFHGLTQPDIFSWSAVISGLAMNGESDKALHLFS------------- 234
Query: 259 IDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGL 307
Q+E +S+ I PN++ + ++ AC +GL
Sbjct: 235 -----QMEMISD------------IRPNEITFLGVLCACNHGGFVDKGL 266
Score = 136 bits (342), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 104/379 (27%), Positives = 171/379 (45%), Gaps = 49/379 (12%)
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
G +P+ + V+ + L + + R +H +KL + V + L++ + C ++ A
Sbjct: 5 GTLPDNYSFPFVLKACARLSLLHKGREIHSSTLKLGVHLDVFVQNALISAFSSCGAVEAA 64
Query: 210 RSLFDEMKE--RNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVER 267
R++FD + R++VSWN M++G+ ++ ELA ++F+RIP ++ V W +MI GY Q +
Sbjct: 65 RAVFDMLPALVRDVVSWNSMISGYLQSHRYELALKVFDRIPHRNTVCWTSMIAGYAQSDL 124
Query: 268 LSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQAT 327
EA+ ++R M G A + I ++SACG A +G IH + + +
Sbjct: 125 FKEAIELFREMQIGGFAADAATIACVLSACGHWGALAQGRWIHLYCERNSIEMDLNARNA 184
Query: 328 IIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSW 387
+I Y+ CG I A F + I SW+A+I+G NG + A LF+ M+
Sbjct: 185 LIGMYSKCGDIQKALEIFHGLTQPDIFSWSAVISGLAMNGESDKALHLFSQME------- 237
Query: 388 SAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLN 447
MIS ++PNEIT + V CA G + +G +
Sbjct: 238 --MIS---------------------DIRPNEITFLGVLCACNHGGFVDKGLYYF----- 269
Query: 448 NSITLNDNLSAAIID---MYAKCGSINTAFEVFYHIRDRTTSVSP----WNAIICGLAMH 500
N++T NL+ I M G N E I RT + P W +++ H
Sbjct: 270 NAMTQIYNLTPGIEHYGCMVDLLGRANLLVEAEKFI--RTLPIQPDVVIWRSLLFACRNH 327
Query: 501 GD---ANLTLKIYSDLEKR 516
G+ A K +LE R
Sbjct: 328 GNIELAEFAAKQIEELEPR 346
>gi|15228028|ref|NP_181820.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206274|sp|Q9SJG6.1|PP200_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g42920, chloroplastic; Flags: Precursor
gi|4512663|gb|AAD21717.1| hypothetical protein [Arabidopsis thaliana]
gi|20197867|gb|AAM15291.1| hypothetical protein [Arabidopsis thaliana]
gi|110738441|dbj|BAF01146.1| hypothetical protein [Arabidopsis thaliana]
gi|330255093|gb|AEC10187.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 559
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 162/430 (37%), Positives = 253/430 (58%), Gaps = 16/430 (3%)
Query: 243 LFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDG--IAPNDVMIVDLISACGRA 300
+F RI K+ W T+I G+ + A++++ MLC + P + + A GR
Sbjct: 80 VFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRL 139
Query: 301 MAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACG------RINLARLQFELGIKDHIA 354
+G Q+H +++K G + FI+ T++H Y CG RI L + F+ +
Sbjct: 140 GQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFD------VV 193
Query: 355 SWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAG 414
+WN++I GF + G+I+ A+ LF+ M +R+ SW++MISG+ +N + AL++F M +
Sbjct: 194 AWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKD 253
Query: 415 VKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAF 474
VKP+ TMVS+ A A G ++GRW HEY++ N LN + A+IDMY KCG I
Sbjct: 254 VKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGL 313
Query: 475 EVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCH 534
VF + +S WN++I GLA +G + ++S+LE+ ++ +S++FIGVL+ C H
Sbjct: 314 NVFECAPKK--QLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAH 371
Query: 535 AGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWG 594
+G V + +F+ MK Y +EP +KHY MV++LG AG LE+AE +I++MP++ D VIW
Sbjct: 372 SGEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWS 431
Query: 595 TLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCG 654
+LL+A R GNVE+ +RAAK L L P VLLSN YA G +E+A R M++
Sbjct: 432 SLLSACRKIGNVEMAKRAAKCLKKLDPDETCGYVLLSNAYASYGLFEEAVEQRLLMKERQ 491
Query: 655 MKRLPGFSGV 664
M++ G S +
Sbjct: 492 MEKEVGCSSI 501
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 108/376 (28%), Positives = 188/376 (50%), Gaps = 10/376 (2%)
Query: 105 LNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDM--RILGVIPNEVTLASVI 162
+N A VF + K + ++I GF+++ A+ +F DM V P +T SV
Sbjct: 74 MNYAYLVFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVF 133
Query: 163 SSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIV 222
+ LG + R LHG+VIK ++ I +L+MY C L+EA +F M ++V
Sbjct: 134 KAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVV 193
Query: 223 SWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDG 282
+WN M+ GFAK GL++ A+ LF+ +P ++ VSW +MI G+++ R +AL M+R M
Sbjct: 194 AWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKD 253
Query: 283 IAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLAR 342
+ P+ +V L++AC A +G IH IV+ F+ + +I Y CG I
Sbjct: 254 VKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGL 313
Query: 343 LQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKR----DVYSWSAMISGYAQNE 398
FE K ++ WN++I G NG E A LF+ +++ D S+ +++ A +
Sbjct: 314 NVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSG 373
Query: 399 QPNMALELFHGMVDA-GVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLS 457
+ + A E F M + ++P+ + + +G L+E A + N + + +
Sbjct: 374 EVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEE---AEALIKNMPVEEDTVIW 430
Query: 458 AAIIDMYAKCGSINTA 473
++++ K G++ A
Sbjct: 431 SSLLSACRKIGNVEMA 446
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/353 (26%), Positives = 169/353 (47%), Gaps = 62/353 (17%)
Query: 42 GQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIR 101
G+Q+H ++ K GLE ++FI+N+++++Y CG + +A +F D VA N MI G+ +
Sbjct: 145 GRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAK 204
Query: 102 NDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASV 161
++ A+ +FD+ P + VS+ SMI GF +N +++AL++FR+M+ V P+ T+ S+
Sbjct: 205 CGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSL 264
Query: 162 ISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNI 221
+++ +LG + R +H +++ + I+ T L++MYC C + E ++F+ ++ +
Sbjct: 265 LNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQL 324
Query: 222 VSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCD 281
WN M+ G A G E A +LF ++ER
Sbjct: 325 SCWNSMILGLANNGFEERAMDLFS------------------ELER-------------S 353
Query: 282 GIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLA 341
G+ P+ V + +++AC + GE +H R+
Sbjct: 354 GLEPDSVSFIGVLTACAHS---GE-----------------------VHRADEFFRLMKE 387
Query: 342 RLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ-KRDVYSWSAMISG 393
+ E IK + N L G++E+A L NM + D WS+++S
Sbjct: 388 KYMIEPSIKHYTLMVNVLGGA----GLLEEAEALIKNMPVEEDTVIWSSLLSA 436
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 100/220 (45%), Gaps = 33/220 (15%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+VS L C+ A QG+ IH I ++ E N+ + +LI++Y KCG I + ++F+
Sbjct: 259 FTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFE- 317
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
C+ ++C + SMI+G A N A+++F
Sbjct: 318 CAPKKQLSC------------------------------WNSMILGLANNGFEERAMDLF 347
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVI-KLMIDGFVIISTNLLNMYCV 202
++ G+ P+ V+ V+++ H G + L+ K MI+ + T ++N+
Sbjct: 348 SELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGG 407
Query: 203 CSSLVEARSLFDEMK-ERNIVSWNVMLNGFAKAGLVELAR 241
L EA +L M E + V W+ +L+ K G VE+A+
Sbjct: 408 AGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMAK 447
>gi|449499218|ref|XP_004160754.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 766
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 181/640 (28%), Positives = 310/640 (48%), Gaps = 92/640 (14%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
+ A L+ C ++ G +H+ I G S+TF+ +L+N+YAK
Sbjct: 171 QFAYSGILQICIGLDSIELGNMVHAQIVIRGFTSHTFVSTALLNMYAKL----------- 219
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+ D+ +VF+ VS+ +MI GF ND + +A ++
Sbjct: 220 --------------------QEIEDSYKVFNTMTEVNVVSWNAMITGFTSNDLYLDAFDL 259
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
F M GV P+ T V + L + + + + G ++L +D ++ T L++M
Sbjct: 260 FLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEVSGYALELGVDSNTLVGTALIDMNSK 319
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
C SL EARS+F+ I + W MI GY
Sbjct: 320 CGSLQEARSIFNS-----------------------------HFITCRFNAPWNAMISGY 350
Query: 263 LQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD 322
L+ +AL ++ M + I + + +A G ++H+ +K+G +
Sbjct: 351 LRSGFNEKALELFAKMCQNDIYLDHYTYCSVFNAIAALKCLSLGKKVHARAIKSGLEV-- 408
Query: 323 FIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKR 382
++++ NA+ + + G +ED R++FN M+ R
Sbjct: 409 ----------------------------NYVSISNAVANAYAKCGSLEDVRKVFNRMEDR 440
Query: 383 DVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAH 442
D+ SW+++++ Y+Q + + A+E+F M G+ PN+ T SV + A+ L+ G+ H
Sbjct: 441 DLISWTSLVTAYSQCSEWDKAIEIFSNMRAEGIAPNQFTFSSVLVSCANLCLLEYGQQVH 500
Query: 443 EYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGD 502
+ + ++ + +A++DMYAKCG + A +VF I + T W AII G A HG
Sbjct: 501 GIICKVGLDMDKCIESALVDMYAKCGCLGDAKKVFNRISNADTV--SWTAIIAGHAQHGI 558
Query: 503 ANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYG 562
+ L+++ + + ++ N++TF+ VL C H GLV+ G +YFK MK Y + P+++HY
Sbjct: 559 VDDALQLFRRMVQLGVEPNAVTFLCVLFACSHGGLVEEGLQYFKLMKKTYGLVPEMEHYA 618
Query: 563 CMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPS 622
C+VDLL R G L DA E I MP++ + ++W TLL A R+HGNVE+GE AA+ + +
Sbjct: 619 CIVDLLSRVGHLNDAMEFISRMPVEPNEMVWQTLLGACRVHGNVELGELAAQKILSFKAE 678
Query: 623 HGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
+ + VLLSN Y ++G ++D S+R M++ G+K+ PG S
Sbjct: 679 NSATYVLLSNTYIESGSYKDGLSLRHVMKEQGVKKEPGCS 718
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 142/605 (23%), Positives = 254/605 (41%), Gaps = 107/605 (17%)
Query: 11 NSQKANLQNSDYEL-ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYA 69
NS K + +S ++ LV LR C + Q + +H + KS ++ +SL+
Sbjct: 55 NSVKVDKTDSHLQIQPLVDLLRDCVDARFLKQAKTVHGFLLKSKFSNH----HSLV---- 106
Query: 70 KCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMG 129
L++ + CS +D AC + FD+ + S+T +I G
Sbjct: 107 ---LLNHVAHAYSKCSDIDA-ACRL-----------------FDQMSQRNTFSWTVLIAG 145
Query: 130 FAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGF 189
A+N + + E F +M+ G+ P++ + ++ + L I M+H ++
Sbjct: 146 LAENGLFLDGFEFFCEMQSQGIFPDQFAYSGILQICIGLDSIELGNMVHAQIVIRGFTSH 205
Query: 190 VIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPS 249
+ST LLNMY + ++ +F+ M E N+VSWN M+ GF L A +LF R
Sbjct: 206 TFVSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMITGFTSNDLYLDAFDLFLR--- 262
Query: 250 KDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQI 309
M+ +G+ P+ + + A G + ++
Sbjct: 263 ----------------------------MMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEV 294
Query: 310 HSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHI------ASWNALIAGF 363
++ G D + +I + CG + AR F H A WNA+I+G+
Sbjct: 295 SGYALELGVDSNTLVGTALIDMNSKCGSLQEARSIF----NSHFITCRFNAPWNAMISGY 350
Query: 364 IRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMV 423
+R+G E A +LF M + D+Y + T
Sbjct: 351 LRSGFNEKALELFAKMCQNDIY-------------------------------LDHYTYC 379
Query: 424 SVFCAIASSGTLKEGRWAHEYVLNNSITLND-NLSAAIIDMYAKCGSINTAFEVFYHIRD 482
SVF AIA+ L G+ H + + + +N ++S A+ + YAKCGS+ +VF + D
Sbjct: 380 SVFNAIAALKCLSLGKKVHARAIKSGLEVNYVSISNAVANAYAKCGSLEDVRKVFNRMED 439
Query: 483 RTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGE 542
R + W +++ + + + ++I+S++ I N TF VL +C + L++ G+
Sbjct: 440 R--DLISWTSLVTAYSQCSEWDKAIEIFSNMRAEGIAPNQFTFSSVLVSCANLCLLEYGQ 497
Query: 543 RYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRI 602
+ + V ++ D +VD+ + G L DA++V + AD V W ++A
Sbjct: 498 QVHGIICKV-GLDMDKCIESALVDMYAKCGCLGDAKKVFNRIS-NADTVSWTAIIAGHAQ 555
Query: 603 HGNVE 607
HG V+
Sbjct: 556 HGIVD 560
>gi|356524477|ref|XP_003530855.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like [Glycine max]
Length = 529
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 167/474 (35%), Positives = 264/474 (55%), Gaps = 38/474 (8%)
Query: 225 NVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIA 284
N ++ + + LA F + + +V+ + +I G + +AL Y ML + +
Sbjct: 14 NQFISACSNLSCINLAASAFANVQNPNVLVFNALIRGCVHCCYSEQALVHYMHMLRNNVM 73
Query: 285 PNDVMIVDLISACGRAM--AFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLAR 342
P LI AC + AFGE +H + K GFD + F+Q T+I FY+ G + +R
Sbjct: 74 PTSYSFSSLIKACTLLVDSAFGEA--VHGHVWKHGFDSHVFVQTTLIEFYSTFGDVGGSR 131
Query: 343 LQFE---------------LGIKD----------------HIASWNALIAGFIRNGMIED 371
F+ ++D ++A+WNA+I G+ + G E
Sbjct: 132 RVFDDMPERDVFAWTTMISAHVRDGDMASAGRLFDEMPEKNVATWNAMIDGYGKLGNAES 191
Query: 372 ARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIAS 431
A LFN M RD+ SW+ M++ Y++N++ + LFH ++D G+ P+E+TM +V A A
Sbjct: 192 AEFLFNQMPARDIISWTTMMNCYSRNKRYKEVIALFHDVIDKGMIPDEVTMTTVISACAH 251
Query: 432 SGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWN 491
G L G+ H Y++ L+ + +++IDMYAKCGSI+ A VFY ++ T ++ WN
Sbjct: 252 LGALALGKEVHLYLVLQGFDLDVYIGSSLIDMYAKCGSIDMALLVFYKLQ--TKNLFCWN 309
Query: 492 AIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSV 551
II GLA HG L+++ ++E++ I+ N++TFI +L+ C HAG ++ G R+F SM
Sbjct: 310 CIIDGLATHGYVEEALRMFGEMERKRIRPNAVTFISILTACTHAGFIEEGRRWFMSMVQD 369
Query: 552 YNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGER 611
Y + P ++HYGCMVDLL +AG LEDA E+IR+M ++ + IWG LL ++H N+E+
Sbjct: 370 YCIAPQVEHYGCMVDLLSKAGLLEDALEMIRNMTVEPNSFIWGALLNGCKLHKNLEIAHI 429
Query: 612 AAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGM-KRLPGFSGV 664
A ++L L+PS+ LL N+YA+ RW + IR M+D G+ KR PG S V
Sbjct: 430 AVQNLMVLEPSNSGHYSLLVNMYAEENRWNEVAKIRTTMKDLGVEKRCPGSSWV 483
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 115/490 (23%), Positives = 204/490 (41%), Gaps = 103/490 (21%)
Query: 49 IFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDA 108
+ K+ + F+ N I+ + I+ A S F + + + N +I G +
Sbjct: 1 MIKTNTTQDCFLVNQFISACSNLSCINLAASAFANVQNPNVLVFNALIRGCVH------- 53
Query: 109 REVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHL 168
CC S +AL + M V+P + +S+I + L
Sbjct: 54 ----------CCYS--------------EQALVHYMHMLRNNVMPTSYSFSSLIKACTLL 89
Query: 169 GGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSS----------------------- 205
+HG V K D V + T L+ Y
Sbjct: 90 VDSAFGEAVHGHVWKHGFDSHVFVQTTLIEFYSTFGDVGGSRRVFDDMPERDVFAWTTMI 149
Query: 206 --------LVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGT 257
+ A LFDEM E+N+ +WN M++G+ K G E A LF ++P++D++SW T
Sbjct: 150 SAHVRDGDMASAGRLFDEMPEKNVATWNAMIDGYGKLGNAESAEFLFNQMPARDIISWTT 209
Query: 258 MIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAG 317
M++ Y + +R E + ++ ++ G+ P++V + +ISAC A G ++H +V G
Sbjct: 210 MMNCYSRNKRYKEVIALFHDVIDKGMIPDEVTMTTVISACAHLGALALGKEVHLYLVLQG 269
Query: 318 FDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFN 377
FD +I +++I YA CG I++A L F ++ WN +I G +G +E+A ++F
Sbjct: 270 FDLDVYIGSSLIDMYAKCGSIDMALLVFYKLQTKNLFCWNCIIDGLATHGYVEEALRMFG 329
Query: 378 NMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKE 437
M+++ ++PN +T +S+ A +G ++E
Sbjct: 330 EMERKR-------------------------------IRPNAVTFISILTACTHAGFIEE 358
Query: 438 G-RWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSP----WNA 492
G RW V + I ++D+ +K G + A E+ R +V P W A
Sbjct: 359 GRRWFMSMVQDYCIAPQVEHYGCMVDLLSKAGLLEDALEMI-----RNMTVEPNSFIWGA 413
Query: 493 IICGLAMHGD 502
++ G +H +
Sbjct: 414 LLNGCKLHKN 423
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 93/415 (22%), Positives = 181/415 (43%), Gaps = 101/415 (24%)
Query: 14 KANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGL 73
+ N+ + Y + S ++ C+ + + G+ +H ++K G +S+ F+Q +LI Y+ G
Sbjct: 69 RNNVMPTSYSFS--SLIKACTLLVDSAFGEAVHGHVWKHGFDSHVFVQTTLIEFYSTFGD 126
Query: 74 ISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMG---- 129
+ ++ +FD D A MIS ++R+ + A +FD+ P K ++ +MI G
Sbjct: 127 VGGSRRVFDDMPERDVFAWTTMISAHVRDGDMASAGRLFDEMPEKNVATWNAMIDGYGKL 186
Query: 130 ---------------------------FAQNDCWREALEVFRDMRILGVIPNEVTLASVI 162
+++N ++E + +F D+ G+IP+EVT+ +VI
Sbjct: 187 GNAESAEFLFNQMPARDIISWTTMMNCYSRNKRYKEVIALFHDVIDKGMIPDEVTMTTVI 246
Query: 163 SSSVHLGGIWECRMLHGLVIKLMIDGF---VIISTNLLNMYCVCSSLVEARSLFDEMKER 219
S+ HLG + + +H + L++ GF V I ++L++MY C S+ A +F +++ +
Sbjct: 247 SACAHLGALALGKEVH---LYLVLQGFDLDVYIGSSLIDMYAKCGSIDMALLVFYKLQTK 303
Query: 220 NIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAML 279
N+ WN +++G A G VE EAL M+ M
Sbjct: 304 NLFCWNCIIDGLATHGYVE-------------------------------EALRMFGEME 332
Query: 280 CDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRIN 339
I PN V + +++AC A EG + +V+
Sbjct: 333 RKRIRPNAVTFISILTACTHAGFIEEGRRWFMSMVQ------------------------ 368
Query: 340 LARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ-KRDVYSWSAMISG 393
+ I + + ++ + G++EDA ++ NM + + + W A+++G
Sbjct: 369 ------DYCIAPQVEHYGCMVDLLSKAGLLEDALEMIRNMTVEPNSFIWGALLNG 417
>gi|449441113|ref|XP_004138328.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Cucumis sativus]
Length = 990
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 198/710 (27%), Positives = 337/710 (47%), Gaps = 140/710 (19%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
++ C+ + G+ +H + K GL + F+ N++I LY KCG
Sbjct: 217 IKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGF---------------- 260
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
L++A E+FDK P + +S+ S+I GF++N W EA FR +
Sbjct: 261 ---------------LDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLES 305
Query: 150 G--VIPNEVTLASVISSSVHLGGIWECRMLHG------LVIKLMI--------------- 186
G +IP+ T+ +++ G + ++HG LV +LM+
Sbjct: 306 GDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLS 365
Query: 187 --------------------------DGFVIISTNLL------------------NMYCV 202
+GFV + +LL N+
Sbjct: 366 EAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTILNLLPA 425
Query: 203 C---SSLVEAR-----SLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVS 254
C S L+ R SL + + +++ N + +AK G + A +F + +K V S
Sbjct: 426 CLEESELLSLRALHGYSLRHSFQYKELIN-NAFIAAYAKCGSLVFAEHVFFGMNTKSVSS 484
Query: 255 WGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIV 314
W +I G+ Q +AL Y M GI P+D IV L+ ACGR G +IH ++
Sbjct: 485 WNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEIHGFVL 544
Query: 315 KAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQ 374
+ G + F+ +++ Y C + R FE
Sbjct: 545 RNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFE---------------------------- 576
Query: 375 LFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGT 434
M ++ W+AM+SGY+QNE PN AL LF M+ G++P+EI + S+ A +
Sbjct: 577 ---TMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDEIAIASILGACSQLSA 633
Query: 435 LKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAII 494
L G+ H + L NS+ ++ ++ +++DMYAK G + + +F + + V+ WN +I
Sbjct: 634 LGLGKEVHCFALKNSLMEDNFVACSLMDMYAKSGFLGHSQRIFNRLNGK--EVASWNVMI 691
Query: 495 CGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNV 554
G +HG N ++++ D+++ + + + TF+GVL CCHAGLV G Y M+++Y +
Sbjct: 692 TGFGVHGQGNKAVELFEDMKRSDKQPDRFTFLGVLQACCHAGLVSEGLNYLAQMQTLYKL 751
Query: 555 EPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAK 614
EP+L+HY C++D+LGRAG+L +A I MP + D IW +LL++S + ++E+GE+ A+
Sbjct: 752 EPELEHYACVIDMLGRAGRLNEALNFINEMPEEPDAKIWSSLLSSSITYVDLEMGEKFAE 811
Query: 615 SLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
L L+ + S +LLSN+YA AG+W+ +R++M+D +++ G S +
Sbjct: 812 KLLALEANKADSYILLSNLYATAGKWDVVRMVRQKMKDLSLQKDVGCSWI 861
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 130/545 (23%), Positives = 231/545 (42%), Gaps = 112/545 (20%)
Query: 13 QKANLQNSDYELA-----LVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNS-LIN 66
Q+A N+ Y+LA + L+ C + V G+++ ++ S S F+ N+ LI
Sbjct: 92 QRAWKNNAGYDLAQRKEAMGMLLQKCGQYKNVEIGRKLDEMLCVSSQFSGDFVLNTRLIT 151
Query: 67 LYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSM 126
+Y+ CG P+ ++R VFD+ K + ++
Sbjct: 152 MYSICGY---------------PL----------------ESRLVFDRLLNKNLFQWNAL 180
Query: 127 IMGFAQNDCWREALEVFRDM-RILGVIPNEVTLASVISS-----SVHLGGIWECRMLHGL 180
+ G+ +N+ + EA+ F ++ + P+ T +I + +HLG + +HG+
Sbjct: 181 VSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLG-----KSVHGM 235
Query: 181 VIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELA 240
+K+ + + + ++ +Y C L EA LFD+M E+N++SWN ++ GF++ G
Sbjct: 236 AVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGF---- 291
Query: 241 RELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAML--CDGIAPNDVMIVDLISACG 298
W EA +R++L DG+ P+ +V L+ C
Sbjct: 292 --------------W-------------LEAYRAFRSLLESGDGLIPDVATMVTLLPVCS 324
Query: 299 RAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNA 358
G+ IH + VK G + +I Y+ CG ++ A + F + SWN+
Sbjct: 325 GEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNS 384
Query: 359 LIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPN 418
+I + R G + + L M W M + ++ N
Sbjct: 385 MIGAYSREGFVFETFDLLRKM-------W----------------------MEEELMEVN 415
Query: 419 EITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFY 478
E+T++++ A L R H Y L +S + ++ A I YAKCGS+ A VF+
Sbjct: 416 EVTILNLLPACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFF 475
Query: 479 HIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLV 538
+ T SVS WNA+I G A +GD L Y ++ + I + + + +L C GL+
Sbjct: 476 GM--NTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLL 533
Query: 539 DLGER 543
G+
Sbjct: 534 QYGKE 538
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 109/231 (47%), Gaps = 35/231 (15%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
+ ++VS L C + G++IH + ++GLE N+F+ SL++LY C ++ F+
Sbjct: 517 DFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFE 576
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+ + V N M+SGY +QN+ EAL +
Sbjct: 577 TMGDKNSVCWNAMLSGY-------------------------------SQNELPNEALSL 605
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIK--LMIDGFVIISTNLLNMY 200
FR M G+ P+E+ +AS++ + L + + +H +K LM D FV S L++MY
Sbjct: 606 FRQMLSDGLEPDEIAIASILGACSQLSALGLGKEVHCFALKNSLMEDNFVACS--LMDMY 663
Query: 201 CVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKD 251
L ++ +F+ + + + SWNVM+ GF G A ELFE + D
Sbjct: 664 AKSGFLGHSQRIFNRLNGKEVASWNVMITGFGVHGQGNKAVELFEDMKRSD 714
>gi|255586940|ref|XP_002534070.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223525897|gb|EEF28314.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 161/434 (37%), Positives = 262/434 (60%), Gaps = 3/434 (0%)
Query: 232 AKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAML-CDGIAPNDVMI 290
+ AG + A +F +I + ++ +W T+I G+ + ++++Y ML + P +
Sbjct: 66 SPAGDINYAYLVFVQIQNPNIFAWNTIIRGFSRSSVPQNSISLYIDMLLTSPVQPQRLTY 125
Query: 291 VDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIK 350
+ A + EG Q+H ++K G + FI+ TI+ Y CG + AR F+ G+
Sbjct: 126 PSVFKAFAQLDLASEGAQLHGKMIKLGLENDSFIRNTILFMYVNCGFTSEARKVFDRGMD 185
Query: 351 DHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGM 410
I +WN +I G + G+++++R+LF+ M R+ SW++MISGY +N + ALELF M
Sbjct: 186 FDIVAWNTMIMGVAKCGLVDESRRLFDKMSLRNAVSWNSMISGYVRNGRFFDALELFQKM 245
Query: 411 VDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSI 470
++P+E TMVS+ A A G +++G W H+Y++ LN + AIIDMY+KCGSI
Sbjct: 246 QVERIEPSEFTMVSLLNACACLGAIRQGEWIHDYMVKKKFELNPIVVTAIIDMYSKCGSI 305
Query: 471 NTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLS 530
+ A +VF R +S WN++I GLAM+G N L+++S L+ +++ + ++FI VL+
Sbjct: 306 DKAVQVFQSAPRR--GLSCWNSMILGLAMNGQENEALQLFSVLQSSDLRPDDVSFIAVLT 363
Query: 531 TCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADV 590
C H G+VD + YF M+ Y ++P +KH+ CMVD+LGRAG LE+AEE+IRSM + D
Sbjct: 364 ACDHTGMVDKAKDYFLLMRDKYKIKPGIKHFSCMVDVLGRAGLLEEAEELIRSMHVDPDA 423
Query: 591 VIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEM 650
+IWG+LL + +GN+++ +RAA L L PS S VL++N YA A +E+A R +
Sbjct: 424 IIWGSLLWSCCKYGNIKMAKRAANHLIELNPSESSSFVLVANAYAAANNFEEALKERLTL 483
Query: 651 RDCGMKRLPGFSGV 664
++ + + PG S +
Sbjct: 484 KENHIGKEPGCSCI 497
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 101/341 (29%), Positives = 174/341 (51%), Gaps = 6/341 (1%)
Query: 105 LNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILG-VIPNEVTLASVIS 163
+N A VF + ++ ++I GF+++ + ++ ++ DM + V P +T SV
Sbjct: 71 INYAYLVFVQIQNPNIFAWNTIIRGFSRSSVPQNSISLYIDMLLTSPVQPQRLTYPSVFK 130
Query: 164 SSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVS 223
+ L E LHG +IKL ++ I +L MY C EAR +FD + +IV+
Sbjct: 131 AFAQLDLASEGAQLHGKMIKLGLENDSFIRNTILFMYVNCGFTSEARKVFDRGMDFDIVA 190
Query: 224 WNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGI 283
WN M+ G AK GLV+ +R LF+++ ++ VSW +MI GY++ R +AL +++ M + I
Sbjct: 191 WNTMIMGVAKCGLVDESRRLFDKMSLRNAVSWNSMISGYVRNGRFFDALELFQKMQVERI 250
Query: 284 APNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARL 343
P++ +V L++AC A +G IH +VK F+ + II Y+ CG I+ A
Sbjct: 251 EPSEFTMVSLLNACACLGAIRQGEWIHDYMVKKKFELNPIVVTAIIDMYSKCGSIDKAVQ 310
Query: 344 QFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDV----YSWSAMISGYAQNEQ 399
F+ + ++ WN++I G NG +A QLF+ +Q D+ S+ A+++
Sbjct: 311 VFQSAPRRGLSCWNSMILGLAMNGQENEALQLFSVLQSSDLRPDDVSFIAVLTACDHTGM 370
Query: 400 PNMALELFHGMVDA-GVKPNEITMVSVFCAIASSGTLKEGR 439
+ A + F M D +KP + + +G L+E
Sbjct: 371 VDKAKDYFLLMRDKYKIKPGIKHFSCMVDVLGRAGLLEEAE 411
Score = 135 bits (340), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 125/213 (58%)
Query: 40 SQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGY 99
S+G Q+H + K GLE+++FI+N+++ +Y CG S+A+ +FD D VA N MI G
Sbjct: 139 SEGAQLHGKMIKLGLENDSFIRNTILFMYVNCGFTSEARKVFDRGMDFDIVAWNTMIMGV 198
Query: 100 IRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLA 159
+ ++++R +FDK ++ VS+ SMI G+ +N + +ALE+F+ M++ + P+E T+
Sbjct: 199 AKCGLVDESRRLFDKMSLRNAVSWNSMISGYVRNGRFFDALELFQKMQVERIEPSEFTMV 258
Query: 160 SVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKER 219
S++++ LG I + +H ++K + I+ T +++MY C S+ +A +F R
Sbjct: 259 SLLNACACLGAIRQGEWIHDYMVKKKFELNPIVVTAIIDMYSKCGSIDKAVQVFQSAPRR 318
Query: 220 NIVSWNVMLNGFAKAGLVELARELFERIPSKDV 252
+ WN M+ G A G A +LF + S D+
Sbjct: 319 GLSCWNSMILGLAMNGQENEALQLFSVLQSSDL 351
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 100/243 (41%), Gaps = 72/243 (29%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E +VS L C+ A+ QG+ IH + K E N + ++I++Y+KCG I +A +F
Sbjct: 254 EFTMVSLLNACACLGAIRQGEWIHDYMVKKKFELNPIVVTAIIDMYSKCGSIDKAVQVFQ 313
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
S P + + SMI+G A N EAL++
Sbjct: 314 S-------------------------------APRRGLSCWNSMILGLAMNGQENEALQL 342
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
F ++ + P++V+ +V+++ H G M+D
Sbjct: 343 FSVLQSSDLRPDDVSFIAVLTACDHTG---------------MVD--------------- 372
Query: 203 CSSLVEARSLFDEMKER-----NIVSWNVMLNGFAKAGLVELARELFERIP-SKDVVSWG 256
+A+ F M+++ I ++ M++ +AGL+E A EL + D + WG
Sbjct: 373 -----KAKDYFLLMRDKYKIKPGIKHFSCMVDVLGRAGLLEEAEELIRSMHVDPDAIIWG 427
Query: 257 TMI 259
+++
Sbjct: 428 SLL 430
>gi|30017569|gb|AAP12991.1| hypothetical protein [Oryza sativa Japonica Group]
gi|40539031|gb|AAR87288.1| putative PPR repeat containing protein [Oryza sativa Japonica
Group]
gi|108711017|gb|ABF98812.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 676
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 161/436 (36%), Positives = 252/436 (57%), Gaps = 6/436 (1%)
Query: 225 NVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIA 284
N ++ + AG VE A +F P+ D VS M+ GY++ +AL +R M GI
Sbjct: 167 NSLIKMYLDAGDVEAAEAMFRCAPTADAVSCNIMLSGYVKGGCSGKALRFFRGMASRGIG 226
Query: 285 PNDVMIVDLISACGRAMAFGEGLQIHSIIVK--AGFDCYDFIQATIIHFYAACGRINLAR 342
+ V L++ CGR G +H ++V+ D + ++ YA CG +N A
Sbjct: 227 VDQYTAVALLACCGRLKKAVLGRSVHGVVVRRIGVADRGLILSNALLDMYAKCGEMNTAM 286
Query: 343 LQF-ELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPN 401
F E G +D I SWN ++AGF G+++ A + F RD+ SW+A+++GYA+ E+ +
Sbjct: 287 RVFDEAGERDGI-SWNTMVAGFANAGLLDLASKYFGEAPARDIISWNALLAGYARYEEFS 345
Query: 402 MALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAII 461
+ LFH M+ + V P+++T V++ A+A GTL R H +V+ T + L++A++
Sbjct: 346 ATMILFHDMLASSVIPDKVTAVTLISAVAGKGTLNSARSVHGWVVKEHGTQDSFLASALV 405
Query: 462 DMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLN 521
DMY KCGSI A+ VF D+ V+ W A+I GLA HG ++ L ++ ++ + N
Sbjct: 406 DMYCKCGSIKLAYAVFEKAVDK--DVTLWTAMISGLAFHGHGDVALDLFWKMQAEGTEPN 463
Query: 522 SITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVI 581
+T + VLS C HAGL D G + F ++K +N+EP ++H+GCMVDLL R+G+L DA ++
Sbjct: 464 GVTLVAVLSACSHAGLFDEGCKIFDTLKQRFNIEPGVEHFGCMVDLLARSGRLSDAVDLA 523
Query: 582 RSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWE 641
R MPMK IWG++L+AS N EV E A+K L L+P+ VLLSN+YA G+W
Sbjct: 524 RRMPMKPSRSIWGSILSASSACQNTEVAEIASKELLCLEPAEEGGYVLLSNMYAAEGQWN 583
Query: 642 DAFSIRKEMRDCGMKR 657
+ +R+ M G+++
Sbjct: 584 YSNEVRENMERKGVRK 599
Score = 190 bits (482), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 123/459 (26%), Positives = 210/459 (45%), Gaps = 68/459 (14%)
Query: 40 SQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGY 99
S G+Q+H+ + +GL S +++NSLI +Y G + A++MF T D V+CNIM+SG
Sbjct: 145 SVGKQVHAHVVVTGLHSRVYLRNSLIKMYLDAGDVEAAEAMFRCAPTADAVSCNIMLSG- 203
Query: 100 IRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLA 159
+ + C +AL FR M G+ ++ T
Sbjct: 204 ------------------------------YVKGGCSGKALRFFRGMASRGIGVDQYTAV 233
Query: 160 SVISSSVHLGGIWECRMLHGLVIKLM--IDGFVIISTNLLNMYCVCSSLVEARSLFDEMK 217
++++ L R +HG+V++ + D +I+S LL+MY C + A +FDE
Sbjct: 234 ALLACCGRLKKAVLGRSVHGVVVRRIGVADRGLILSNALLDMYAKCGEMNTAMRVFDEAG 293
Query: 218 ERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRA 277
ER+ +SWN M+ GFA AGL++LA + F P++D++SW ++ GY + E S + ++
Sbjct: 294 ERDGISWNTMVAGFANAGLLDLASKYFGEAPARDIISWNALLAGYARYEEFSATMILFHD 353
Query: 278 MLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGR 337
ML + P+ V V LISA +H +VK F+ + ++ Y CG
Sbjct: 354 MLASSVIPDKVTAVTLISAVAGKGTLNSARSVHGWVVKEHGTQDSFLASALVDMYCKCGS 413
Query: 338 INLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQN 397
I LA FE + + W A+I+G +G
Sbjct: 414 IKLAYAVFEKAVDKDVTLWTAMISGLAFHG------------------------------ 443
Query: 398 EQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLS 457
++AL+LF M G +PN +T+V+V A + +G EG + L + +
Sbjct: 444 -HGDVALDLFWKMQAEGTEPNGVTLVAVLSACSHAGLFDEGCKIFD-TLKQRFNIEPGVE 501
Query: 458 --AAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAII 494
++D+ A+ G ++ A ++ + + S S W +I+
Sbjct: 502 HFGCMVDLLARSGRLSDAVDLARRMPMK-PSRSIWGSIL 539
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 162/330 (49%), Gaps = 45/330 (13%)
Query: 42 GQQIHSLIFKS-GLESNTFI-QNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGY 99
G+ +H ++ + G+ I N+L+++YAKCG ++ A +FD D ++ N M++G+
Sbjct: 248 GRSVHGVVVRRIGVADRGLILSNALLDMYAKCGEMNTAMRVFDEAGERDGISWNTMVAGF 307
Query: 100 IRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLA 159
L+ A + F + P + +S+ +++ G+A+ + + + +F DM VIP++VT
Sbjct: 308 ANAGLLDLASKYFGEAPARDIISWNALLAGYARYEEFSATMILFHDMLASSVIPDKVTAV 367
Query: 160 SVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKER 219
++IS+ G + R +HG V+K +++ L++MYC C S+ A ++F++ ++
Sbjct: 368 TLISAVAGKGTLNSARSVHGWVVKEHGTQDSFLASALVDMYCKCGSIKLAYAVFEKAVDK 427
Query: 220 NIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAML 279
++ W M++G A G ++A +LF W M
Sbjct: 428 DVTLWTAMISGLAFHGHGDVALDLF----------W---------------------KMQ 456
Query: 280 CDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHF------YA 333
+G PN V +V ++SAC A F EG +I + K F+ I+ + HF A
Sbjct: 457 AEGTEPNGVTLVAVLSACSHAGLFDEGCKIFDTL-KQRFN----IEPGVEHFGCMVDLLA 511
Query: 334 ACGRINLA-RLQFELGIKDHIASWNALIAG 362
GR++ A L + +K + W ++++
Sbjct: 512 RSGRLSDAVDLARRMPMKPSRSIWGSILSA 541
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 132/305 (43%), Gaps = 57/305 (18%)
Query: 348 GIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELF 407
G+ + N+LI ++ G +E A +F D S + M+SGY + AL F
Sbjct: 158 GLHSRVYLRNSLIKMYLDAGDVEAAEAMFRCAPTADAVSCNIMLSGYVKGGCSGKALRFF 217
Query: 408 HGMVDAGVKPNEITMVSVFCAIASSGTLKE---GRWAHEYVLNNSITLNDN---LSAAII 461
GM G+ ++ T V++ +A G LK+ GR H V+ I + D LS A++
Sbjct: 218 RGMASRGIGVDQYTAVAL---LACCGRLKKAVLGRSVHGVVVRR-IGVADRGLILSNALL 273
Query: 462 DMYAKCGSINTAFEVFYHIRDR-----------------------------TTSVSPWNA 492
DMYAKCG +NTA VF +R + WNA
Sbjct: 274 DMYAKCGEMNTAMRVFDEAGERDGISWNTMVAGFANAGLLDLASKYFGEAPARDIISWNA 333
Query: 493 IICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVY 552
++ G A + + + T+ ++ D+ ++ + +T + ++S G ++ S +SV+
Sbjct: 334 LLAGYARYEEFSATMILFHDMLASSVIPDKVTAVTLISAVAGKGTLN-------SARSVH 386
Query: 553 NVEPDLKHYG--------CMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHG 604
+K +G +VD+ + G ++ A V + DV +W +++ HG
Sbjct: 387 GWV--VKEHGTQDSFLASALVDMYCKCGSIKLAYAVFEK-AVDKDVTLWTAMISGLAFHG 443
Query: 605 NVEVG 609
+ +V
Sbjct: 444 HGDVA 448
>gi|449507426|ref|XP_004163029.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Cucumis sativus]
Length = 619
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 179/548 (32%), Positives = 277/548 (50%), Gaps = 71/548 (12%)
Query: 122 SYTSMIMGFAQNDCWRE---ALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLH 178
S+ MI G + W + ALE + M+ LG+ PN +T + + +L + RM H
Sbjct: 93 SFNVMIRGLST--AWNKSSLALEFYSRMKFLGLKPNNLTYPFLFIACSNLLAVENGRMGH 150
Query: 179 GLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVE 238
VI+ +D +S +L+ MY C + +AR
Sbjct: 151 CSVIRRGLDEDGHVSHSLITMYARCGKMGDAR---------------------------- 182
Query: 239 LARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACG 298
++F+ I KD+VSW +MI GY ++ EA+ ++R M+ G PN++ +V ++ ACG
Sbjct: 183 ---KVFDEISQKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMSLVSVLGACG 239
Query: 299 RAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNA 358
G + +V+ F+ + +IH Y CG +
Sbjct: 240 ELGDLKLGTWVEEFVVENKMTLNYFMGSALIHMYGKCGDL-------------------- 279
Query: 359 LIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPN 418
AR++F++M+K+D +W+AMI+GYAQN A++LF M + P+
Sbjct: 280 -----------VSARRIFDSMKKKDKVTWNAMITGYAQNGMSEEAIKLFQDMRMSSTAPD 328
Query: 419 EITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFY 478
+IT++ + A AS G L G+ Y + + A++DMYAKCGS++ AF VFY
Sbjct: 329 QITLIGILSACASIGALDLGKQVEIYASERGFQDDVYVGTALVDMYAKCGSLDNAFRVFY 388
Query: 479 HIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDL--EKRNIKLNSITFIGVLSTCCHAG 536
+ + VS WNA+I LA HG A L ++ + E + N ITF+GVLS C HAG
Sbjct: 389 GM-PKKNEVS-WNAMISALAFHGQAQEALALFKSMMNEGGTVSPNDITFVGVLSACVHAG 446
Query: 537 LVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTL 596
LVD G R F M S + + P ++HY CMVDL RAG LE+A + + +MP K D VI G L
Sbjct: 447 LVDEGRRLFHMMSSSFGLVPKIEHYSCMVDLFSRAGHLEEAWDFVMTMPEKPDEVILGAL 506
Query: 597 LAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMK 656
L A + N+++ ER K L L+PS+ + V+ S +YA+ RW+D+ +R M+ G+
Sbjct: 507 LGACQKRKNIDISERVMKLLLELEPSNSGNYVISSKLYANLRRWDDSARMRMLMKQKGVS 566
Query: 657 RLPGFSGV 664
+ PG S +
Sbjct: 567 KTPGCSWI 574
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 115/459 (25%), Positives = 200/459 (43%), Gaps = 98/459 (21%)
Query: 33 CSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVAC 92
CS +AV G+ H + + GL+ + + +SLI +YA+CG
Sbjct: 137 CSNLLAVENGRMGHCSVIRRGLDEDGHVSHSLITMYARCG-------------------- 176
Query: 93 NIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVI 152
++ DAR+VFD+ K VS+ SMI G+++ EA+ +FR+M G
Sbjct: 177 -----------KMGDARKVFDEISQKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQ 225
Query: 153 PNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSL 212
PNE++L SV+ + C L L + ++ FV+ + LN Y + S+L+
Sbjct: 226 PNEMSLVSVLGA---------CGELGDLKLGTWVEEFVVENKMTLN-YFMGSALIHM--- 272
Query: 213 FDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEAL 272
+ K G + AR +F+ + KD V+W MI GY Q EA+
Sbjct: 273 ------------------YGKCGDLVSARRIFDSMKKKDKVTWNAMITGYAQNGMSEEAI 314
Query: 273 TMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFY 332
+++ M AP+ + ++ ++SAC A G Q+ + GF ++ ++ Y
Sbjct: 315 KLFQDMRMSSTAPDQITLIGILSACASIGALDLGKQVEIYASERGFQDDVYVGTALVDMY 374
Query: 333 AACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMIS 392
A CG ++ A F K + SWNA+I+ +G
Sbjct: 375 AKCGSLDNAFRVFYGMPKKNEVSWNAMISALAFHG------------------------- 409
Query: 393 GYAQNEQPNMALELFHGMVDAG--VKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSI 450
Q AL LF M++ G V PN+IT V V A +G + EGR +++++S
Sbjct: 410 ------QAQEALALFKSMMNEGGTVSPNDITFVGVLSACVHAGLVDEGRRLF-HMMSSSF 462
Query: 451 TLNDNLS--AAIIDMYAKCGSINTAFEVFYHIRDRTTSV 487
L + + ++D++++ G + A++ + ++ V
Sbjct: 463 GLVPKIEHYSCMVDLFSRAGHLEEAWDFVMTMPEKPDEV 501
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 131/293 (44%), Gaps = 64/293 (21%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E++LVS L C + G + + ++ + N F+ ++LI++Y KCG + A+ +FD
Sbjct: 228 EMSLVSVLGACGELGDLKLGTWVEEFVVENKMTLNYFMGSALIHMYGKCGDLVSARRIFD 287
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
S D V N MI+GY AQN EA+++
Sbjct: 288 SMKKKDKVTWNAMITGY-------------------------------AQNGMSEEAIKL 316
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
F+DMR+ P+++TL ++S+ +G + + + + V + T L++MY
Sbjct: 317 FQDMRMSSTAPDQITLIGILSACASIGALDLGKQVEIYASERGFQDDVYVGTALVDMYAK 376
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
C SL A +F M ++N VSWN M++ A G +
Sbjct: 377 CGSLDNAFRVFYGMPKKNEVSWNAMISALAFHGQAQ------------------------ 412
Query: 263 LQVERLSEALTMYRAMLCDG--IAPNDVMIVDLISACGRAMAFGEGLQIHSII 313
EAL ++++M+ +G ++PND+ V ++SAC A EG ++ ++
Sbjct: 413 -------EALALFKSMMNEGGTVSPNDITFVGVLSACVHAGLVDEGRRLFHMM 458
>gi|357167761|ref|XP_003581320.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
mitochondrial-like [Brachypodium distachyon]
Length = 773
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 194/640 (30%), Positives = 309/640 (48%), Gaps = 99/640 (15%)
Query: 28 SALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTL 87
S L C +S G+ +H K G+ + ++L ++Y+KC
Sbjct: 226 SGLEACGVLGELSAGRCLHGYAVKEGIRDCALVVSALFSMYSKC---------------- 269
Query: 88 DPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMR 147
D DA +F + K VS+T +I + + REA+E+F++M
Sbjct: 270 ---------------DMTEDACILFPELTEKDVVSWTGLIGAYCRRGLAREAVELFQEME 314
Query: 148 ILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLV 207
G+ P+EV ++ V+S + + H ++I+ V+I+ +L++MY
Sbjct: 315 QSGLQPDEVLVSCVLSGLGSSANVNRGKAFHAVIIRRNFGDSVLIANSLISMY------- 367
Query: 208 EARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVER 267
K LV++A +F + +D SW M+ GY +
Sbjct: 368 ------------------------GKFELVDVAGTVFGMLHQRDDESWSLMVAGYCKAGL 403
Query: 268 LSEALTMYRAMLC---DGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFI 324
+ L +YR M C D + +V IS+C R G +H +K D + I
Sbjct: 404 DVKCLELYRQMQCRDHDEFLCDITSLVSAISSCSRLGRLRLGQSVHCYSIKCLLD-ENSI 462
Query: 325 QATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDV 384
++I Y CG LA F + +RDV
Sbjct: 463 TNSLIGMYGRCGNFELACKIFAVA------------------------------KLRRDV 492
Query: 385 YSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEY 444
+W+A+IS Y+ + N AL L+ M+ VKPN T+++V A A+ L+ G H Y
Sbjct: 493 VTWNALISSYSHVGRSNDALSLYGQMLTEDVKPNSSTLITVISACANLAALEHGELLHSY 552
Query: 445 VLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDAN 504
V N + + ++S A++DMY KCG + TA +F + R V WN +I G MHG+AN
Sbjct: 553 VKNMGLESDVSISTALVDMYTKCGQLGTARGIFDSMLQR--DVVTWNVMISGYGMHGEAN 610
Query: 505 LTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCM 564
LK++S++E +IK NS+TF+ +LS CCHAGLVD G + F M Y +EP+LKHY CM
Sbjct: 611 QALKLFSEMEAGSIKPNSLTFLAILSACCHAGLVDEGRKLFIRMGG-YRLEPNLKHYACM 669
Query: 565 VDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHG 624
VDLLG++G L++AE+++ +MP+K D +WGTLL+A ++H N E+G R AK P +
Sbjct: 670 VDLLGKSGLLQEAEDLVLAMPIKPDGGVWGTLLSACKVHDNFEMGLRVAKKAFSSDPRND 729
Query: 625 PSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
+L+SN Y A +W++ +R M++ G+++ G+S V
Sbjct: 730 GYYILMSNSYGSAEKWDEIEKLRDTMKNYGVEKGVGWSAV 769
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 132/567 (23%), Positives = 243/567 (42%), Gaps = 93/567 (16%)
Query: 42 GQQIHSLIFKSGL---ESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISG 98
G +HS K GL + + + +SL+ +YA+CG + A +FD D VA ++SG
Sbjct: 132 GTSVHSYSVKFGLLAGDGSVAVSSSLVYMYARCGSLGDAVKLFDEMVERDVVAWTAVVSG 191
Query: 99 YIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTL 158
+RN + Y ++ A + G PN T+
Sbjct: 192 CVRNGECGKG------------ICYLVQMIRLAGDS---------------GARPNSRTM 224
Query: 159 ASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKE 218
S + + LG + R LHG +K I ++ + L +MY C +A LF E+ E
Sbjct: 225 ESGLEACGVLGELSAGRCLHGYAVKEGIRDCALVVSALFSMYSKCDMTEDACILFPELTE 284
Query: 219 RNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAM 278
+++VSW ++ + + GL A ELF+ +
Sbjct: 285 KDVVSWTGLIGAYCRRGLAREAVELFQEMEQS---------------------------- 316
Query: 279 LCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRI 338
G+ P++V++ ++S G + G H++I++ F I ++I Y +
Sbjct: 317 ---GLQPDEVLVSCVLSGLGSSANVNRGKAFHAVIIRRNFGDSVLIANSLISMYGKFELV 373
Query: 339 NLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNE 398
++A F + + SW+ ++AG+ + G+ +L+ MQ RD + I+
Sbjct: 374 DVAGTVFGMLHQRDDESWSLMVAGYCKAGLDVKCLELYRQMQCRDHDEFLCDIT------ 427
Query: 399 QPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSA 458
++VS + + G L+ G+ H Y + + N +++
Sbjct: 428 ----------------------SLVSAISSCSRLGRLRLGQSVHCYSIKCLLDEN-SITN 464
Query: 459 AIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNI 518
++I MY +CG+ A ++F + R V+ WNA+I + G +N L +Y + ++
Sbjct: 465 SLIGMYGRCGNFELACKIFAVAKLRRDVVT-WNALISSYSHVGRSNDALSLYGQMLTEDV 523
Query: 519 KLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAE 578
K NS T I V+S C + ++ GE +K++ +E D+ +VD+ + GQL A
Sbjct: 524 KPNSSTLITVISACANLAALEHGELLHSYVKNM-GLESDVSISTALVDMYTKCGQLGTAR 582
Query: 579 EVIRSMPMKADVVIWGTLLAASRIHGN 605
+ SM ++ DVV W +++ +HG
Sbjct: 583 GIFDSM-LQRDVVTWNVMISGYGMHGE 608
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 127/566 (22%), Positives = 225/566 (39%), Gaps = 107/566 (18%)
Query: 44 QIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRND 103
++H+L SGL S L++ Y+ GL A F + D N ++
Sbjct: 33 RLHALASTSGLSSRPDFAAKLVSAYSSSGLPGFATLAFSASPCPDTFLWNSLL------- 85
Query: 104 RLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVIS 163
R + FD AL R MR G P+ T S
Sbjct: 86 RSHHCASDFDS------------------------ALSAHRRMRASGARPSRFTAPLAAS 121
Query: 164 SSVHLGGIWECRMLHGLVIKLMI---DGFVIISTNLLNMYCVCSSLVEARSLFDEMKERN 220
++ L + +H +K + DG V +S++L+ MY C SL +A LFDEM ER+
Sbjct: 122 AAAELAALPVGTSVHSYSVKFGLLAGDGSVAVSSSLVYMYARCGSLGDAVKLFDEMVERD 181
Query: 221 IVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLC 280
+V+W +++G + G G I +Q+ RL+
Sbjct: 182 VVAWTAVVSGCVRNG------------------ECGKGICYLVQMIRLAGD--------- 214
Query: 281 DGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINL 340
G PN + + ACG G +H VK G + + + Y+ C
Sbjct: 215 SGARPNSRTMESGLEACGVLGELSAGRCLHGYAVKEGIRDCALVVSALFSMYSKCDMTED 274
Query: 341 ARLQF-ELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQ 399
A + F EL KD + SW LI + R G+ +A +LF M++
Sbjct: 275 ACILFPELTEKD-VVSWTGLIGAYCRRGLAREAVELFQEMEQ------------------ 315
Query: 400 PNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAA 459
+G++P+E+ + V + SS + G+ H ++ + + ++ +
Sbjct: 316 -------------SGLQPDEVLVSCVLSGLGSSANVNRGKAFHAVIIRRNFGDSVLIANS 362
Query: 460 IIDMYAKCGSINTAFEVF--YHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRN 517
+I MY K ++ A VF H RD + W+ ++ G G L++Y ++ R+
Sbjct: 363 LISMYGKFELVDVAGTVFGMLHQRDDES----WSLMVAGYCKAGLDVKCLELYRQMQCRD 418
Query: 518 ---IKLNSITFIGVLSTCCHAGLVDLGER-YFKSMKSVYNVEPDLKHYGCMVDLLGRAGQ 573
+ + + +S+C G + LG+ + S+K + + E + + ++ + GR G
Sbjct: 419 HDEFLCDITSLVSAISSCSRLGRLRLGQSVHCYSIKCLLD-ENSITN--SLIGMYGRCGN 475
Query: 574 LEDAEEVIRSMPMKADVVIWGTLLAA 599
E A ++ ++ DVV W L+++
Sbjct: 476 FELACKIFAVAKLRRDVVTWNALISS 501
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 98/399 (24%), Positives = 167/399 (41%), Gaps = 72/399 (18%)
Query: 25 ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSC 84
+LVSA+ CS + GQ +H K L+ N+ I NSLI +Y +CG
Sbjct: 428 SLVSAISSCSRLGRLRLGQSVHCYSIKCLLDENS-ITNSLIGMYGRCGNFE--------- 477
Query: 85 STLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFR 144
+AC I +R D V++ ++I ++ +AL ++
Sbjct: 478 -----LACKIFAVAKLRRD----------------VVTWNALISSYSHVGRSNDALSLYG 516
Query: 145 DMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCS 204
M V PN TL +VIS+ +L + +LH V + ++ V IST L++MY C
Sbjct: 517 QMLTEDVKPNSSTLITVISACANLAALEHGELLHSYVKNMGLESDVSISTALVDMYTKCG 576
Query: 205 SLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQ 264
L AR +FD M +R++V+WNVM++G+ G
Sbjct: 577 QLGTARGIFDSMLQRDVVTWNVMISGYGMHG----------------------------- 607
Query: 265 VERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFI 324
++AL ++ M I PN + + ++SAC A EG ++ I G+ +
Sbjct: 608 --EANQALKLFSEMEAGSIKPNSLTFLAILSACCHAGLVDEGRKL--FIRMGGYRLEPNL 663
Query: 325 Q--ATIIHFYAACGRINLAR-LQFELGIKDHIASWNALIAGFIRNGMIE----DARQLFN 377
+ A ++ G + A L + IK W L++ + E A++ F+
Sbjct: 664 KHYACMVDLLGKSGLLQEAEDLVLAMPIKPDGGVWGTLLSACKVHDNFEMGLRVAKKAFS 723
Query: 378 NMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVK 416
+ + D Y + M + Y E+ + +L M + GV+
Sbjct: 724 SDPRNDGY-YILMSNSYGSAEKWDEIEKLRDTMKNYGVE 761
>gi|449477503|ref|XP_004155042.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Cucumis sativus]
Length = 990
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 198/710 (27%), Positives = 337/710 (47%), Gaps = 140/710 (19%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
++ C+ + G+ +H + K GL + F+ N++I LY KCG
Sbjct: 217 IKACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGF---------------- 260
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
L++A E+FDK P + +S+ S+I GF++N W EA FR +
Sbjct: 261 ---------------LDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLES 305
Query: 150 G--VIPNEVTLASVISSSVHLGGIWECRMLHG------LVIKLMI--------------- 186
G +IP+ T+ +++ G + ++HG LV +LM+
Sbjct: 306 GDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLS 365
Query: 187 --------------------------DGFVIISTNLL------------------NMYCV 202
+GFV + +LL N+
Sbjct: 366 EAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTILNLLPA 425
Query: 203 C---SSLVEAR-----SLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVS 254
C S L+ R SL + + +++ N + +AK G + A +F + +K V S
Sbjct: 426 CLEESELLSLRALHGYSLRHSFQYKELIN-NAFIAAYAKCGSLVFAEHVFFGMNTKSVSS 484
Query: 255 WGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIV 314
W +I G+ Q +AL Y M GI P+D IV L+ ACGR G +IH ++
Sbjct: 485 WNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEIHGFVL 544
Query: 315 KAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQ 374
+ G + F+ +++ Y C + R FE
Sbjct: 545 RNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFE---------------------------- 576
Query: 375 LFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGT 434
M ++ W+AM+SGY+QNE PN AL LF M+ G++P+EI + S+ A +
Sbjct: 577 ---RMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDEIAIASILGACSQLSA 633
Query: 435 LKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAII 494
L G+ H + L NS+ ++ ++ +++DMYAK G + + +F + + V+ WN +I
Sbjct: 634 LGLGKEVHCFALKNSLMEDNFVACSLMDMYAKSGFLGHSQRIFNRLNGK--EVASWNVMI 691
Query: 495 CGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNV 554
G +HG N ++++ D+++ + + + TF+GVL CCHAGLV G Y M+++Y +
Sbjct: 692 TGFGVHGQGNKAVELFEDMKRSDKQPDRFTFLGVLQACCHAGLVSEGLNYLAQMQTLYKL 751
Query: 555 EPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAK 614
EP+L+HY C++D+LGRAG+L +A I MP + D IW +LL++S + ++E+GE+ A+
Sbjct: 752 EPELEHYACVIDMLGRAGRLNEALNFINEMPEEPDAKIWSSLLSSSITYVDLEMGEKFAE 811
Query: 615 SLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
L L+ + S +LLSN+YA AG+W+ +R++M+D +++ G S +
Sbjct: 812 KLLALEANKADSYILLSNLYATAGKWDVVRMVRQKMKDLSLQKDVGCSWI 861
Score = 149 bits (376), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 130/545 (23%), Positives = 231/545 (42%), Gaps = 112/545 (20%)
Query: 13 QKANLQNSDYELA-----LVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNS-LIN 66
Q+A N+ Y+LA + L+ C + V G+++ ++ S S F+ N+ LI
Sbjct: 92 QRAWKNNAGYDLAQRKEAMGMLLQKCGQYKNVEIGRKLDEMLCVSSQFSGDFVLNTRLIT 151
Query: 67 LYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSM 126
+Y+ CG P+ ++R VFD+ K + ++
Sbjct: 152 MYSICGY---------------PL----------------ESRLVFDRLLNKNLFQWNAL 180
Query: 127 IMGFAQNDCWREALEVFRDM-RILGVIPNEVTLASVISS-----SVHLGGIWECRMLHGL 180
+ G+ +N+ + EA+ F ++ + P+ T +I + +HLG + +HG+
Sbjct: 181 VSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLG-----KSVHGM 235
Query: 181 VIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELA 240
+K+ + + + ++ +Y C L EA LFD+M E+N++SWN ++ GF++ G
Sbjct: 236 AVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGF---- 291
Query: 241 RELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAML--CDGIAPNDVMIVDLISACG 298
W EA +R++L DG+ P+ +V L+ C
Sbjct: 292 --------------W-------------LEAYRAFRSLLESGDGLIPDVATMVTLLPVCS 324
Query: 299 RAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNA 358
G+ IH + VK G + +I Y+ CG ++ A + F + SWN+
Sbjct: 325 GEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNS 384
Query: 359 LIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPN 418
+I + R G + + L M W M + ++ N
Sbjct: 385 MIGAYSREGFVFETFDLLRKM-------W----------------------MEEELMEVN 415
Query: 419 EITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFY 478
E+T++++ A L R H Y L +S + ++ A I YAKCGS+ A VF+
Sbjct: 416 EVTILNLLPACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFF 475
Query: 479 HIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLV 538
+ T SVS WNA+I G A +GD L Y ++ + I + + + +L C GL+
Sbjct: 476 GM--NTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLL 533
Query: 539 DLGER 543
G+
Sbjct: 534 QYGKE 538
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 108/231 (46%), Gaps = 35/231 (15%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
+ ++VS L C + G++IH + ++GLE N+F+ SL++LY C ++ F+
Sbjct: 517 DFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFE 576
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+ V N M+SGY +QN+ EAL +
Sbjct: 577 RMGDKNSVCWNAMLSGY-------------------------------SQNELPNEALSL 605
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIK--LMIDGFVIISTNLLNMY 200
FR M G+ P+E+ +AS++ + L + + +H +K LM D FV S L++MY
Sbjct: 606 FRQMLSDGLEPDEIAIASILGACSQLSALGLGKEVHCFALKNSLMEDNFVACS--LMDMY 663
Query: 201 CVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKD 251
L ++ +F+ + + + SWNVM+ GF G A ELFE + D
Sbjct: 664 AKSGFLGHSQRIFNRLNGKEVASWNVMITGFGVHGQGNKAVELFEDMKRSD 714
>gi|356547111|ref|XP_003541961.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05750,
chloroplastic-like [Glycine max]
Length = 521
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 160/420 (38%), Positives = 251/420 (59%), Gaps = 12/420 (2%)
Query: 252 VVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGR-----AMAFGEG 306
+VSW T I Y + L +A + + M I PN + + L+SAC +++FG
Sbjct: 56 IVSWTTSIADYCKSGHLVKAASKFVQMREAAIEPNHITFITLLSACAHYPSRSSISFGTA 115
Query: 307 LQIHSIIVKAGFDCYDFIQAT-IIHFYAACGRINLARLQF-ELGIKDHIASWNALIAGFI 364
IH+ + K G D D + T +I YA CGR+ ARL F ++G+++ + SWN +I G++
Sbjct: 116 --IHAHVRKLGLDINDVMVGTALIDMYAKCGRVESARLAFDQMGVRN-LVSWNTMIDGYM 172
Query: 365 RNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVS 424
RNG EDA Q+F+ + ++ SW+A+I G+ + + ALE F M +GV P+ +T+++
Sbjct: 173 RNGKFEDALQVFDGLPVKNAISWTALIGGFVKKDYHEEALECFREMQLSGVAPDYVTVIA 232
Query: 425 VFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRT 484
V A A+ GTL G W H V+ N +S ++IDMY++CG I+ A +VF + RT
Sbjct: 233 VIAACANLGTLGLGLWVHRLVMTQDFRNNVKVSNSLIDMYSRCGCIDLARQVFDRMPQRT 292
Query: 485 TSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERY 544
+ WN+II G A++G A+ L ++ +++ K + +++ G L C HAGL+ G R
Sbjct: 293 --LVSWNSIIVGFAVNGLADEALSYFNSMQEEGFKPDGVSYTGALMACSHAGLIGEGLRI 350
Query: 545 FKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHG 604
F+ MK V + P ++HYGC+VDL RAG+LE+A V+++MPMK + VI G+LLAA R G
Sbjct: 351 FEHMKRVRRILPRIEHYGCLVDLYSRAGRLEEALNVLKNMPMKPNEVILGSLLAACRTQG 410
Query: 605 NVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
N+ + E L L + VLLSNIYA G+W+ A +R+ M++ G+++ PGFS +
Sbjct: 411 NIGLAENVMNYLIELDSGGDSNYVLLSNIYAAVGKWDGANKVRRRMKERGIQKKPGFSSI 470
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 140/518 (27%), Positives = 233/518 (44%), Gaps = 118/518 (22%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESN-TFIQNSLINLYAKCGLISQAKSMFD 82
+ L+SA + + ++S G IH+ + K GL+ N + +LI++YAKCG + A+ FD
Sbjct: 95 ITLLSACAHYPSRSSISFGTAIHAHVRKLGLDINDVMVGTALIDMYAKCGRVESARLAFD 154
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+ V+ N MI GY+RN + DA +VFD P+K +S+T++I GF + D EALE
Sbjct: 155 QMGVRNLVSWNTMIDGYMRNGKFEDALQVFDGLPVKNAISWTALIGGFVKKDYHEEALEC 214
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLG----GIWECRMLHGLVIKLMIDGFVIISTNLLN 198
FR+M++ GV P+ VT+ +VI++ +LG G+W +H LV+ V +S +L++
Sbjct: 215 FREMQLSGVAPDYVTVIAVIAACANLGTLGLGLW----VHRLVMTQDFRNNVKVSNSLID 270
Query: 199 MYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTM 258
MY C + AR +FD M +R +VSWN ++ GFA GL +
Sbjct: 271 MYSRCGCIDLARQVFDRMPQRTLVSWNSIIVGFAVNGLAD-------------------- 310
Query: 259 IDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGF 318
EAL+ + +M +G P+ V + AC A GEGL+I
Sbjct: 311 -----------EALSYFNSMQEEGFKPDGVSYTGALMACSHAGLIGEGLRIFE------- 352
Query: 319 DCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNN 378
++ R++ I I + L+ + R G +E+A + N
Sbjct: 353 --------------------HMKRVR---RILPRIEHYGCLVDLYSRAGRLEEALNVLKN 389
Query: 379 MQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG 438
M +KPNE+ + S+ A + G +
Sbjct: 390 MP----------------------------------MKPNEVILGSLLAACRTQGNIGLA 415
Query: 439 RWAHEYVLNNSITLN---DNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSP-WNAII 494
E V+N I L+ D+ + ++YA G + A +V +++R P +++I
Sbjct: 416 ----ENVMNYLIELDSGGDSNYVLLSNIYAAVGKWDGANKVRRRMKERGIQKKPGFSSIE 471
Query: 495 CGLAMH----GDANLTLK--IYSDLEKRNIKLNSITFI 526
++H GD + K IY+ LE + +L +I
Sbjct: 472 IDSSIHKFVSGDKSHEEKDHIYAALEFLSFELQLCGYI 509
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 102/372 (27%), Positives = 181/372 (48%), Gaps = 36/372 (9%)
Query: 121 VSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHL---GGIWECRML 177
VS+T+ I + ++ +A F MR + PN +T +++S+ H I +
Sbjct: 57 VSWTTSIADYCKSGHLVKAASKFVQMREAAIEPNHITFITLLSACAHYPSRSSISFGTAI 116
Query: 178 HGLVIKLMID-GFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGL 236
H V KL +D V++ T L++MY C + AR FD+M RN+VSWN M++G+ + G
Sbjct: 117 HAHVRKLGLDINDVMVGTALIDMYAKCGRVESARLAFDQMGVRNLVSWNTMIDGYMRNGK 176
Query: 237 VELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISA 296
E A ++F+ +P K+ +SW +I G+++ + EAL +R M G+AP+ V ++ +I+A
Sbjct: 177 FEDALQVFDGLPVKNAISWTALIGGFVKKDYHEEALECFREMQLSGVAPDYVTVIAVIAA 236
Query: 297 CGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASW 356
C G GL +H +++ F + ++I Y+ CG I+LAR F+ + + SW
Sbjct: 237 CANLGTLGLGLWVHRLVMTQDFRNNVKVSNSLIDMYSRCGCIDLARQVFDRMPQRTLVSW 296
Query: 357 NALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVK 416
N++I GF NG+ ++A FN+MQ+ G K
Sbjct: 297 NSIIVGFAVNGLADEALSYFNSMQEE-------------------------------GFK 325
Query: 417 PNEITMVSVFCAIASSGTLKEGRWAHEYVLN-NSITLNDNLSAAIIDMYAKCGSINTAFE 475
P+ ++ A + +G + EG E++ I ++D+Y++ G + A
Sbjct: 326 PDGVSYTGALMACSHAGLIGEGLRIFEHMKRVRRILPRIEHYGCLVDLYSRAGRLEEALN 385
Query: 476 VFYHIRDRTTSV 487
V ++ + V
Sbjct: 386 VLKNMPMKPNEV 397
>gi|357167843|ref|XP_003581359.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like, partial [Brachypodium distachyon]
Length = 745
Score = 303 bits (777), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 181/550 (32%), Positives = 279/550 (50%), Gaps = 69/550 (12%)
Query: 116 PIKCCVSYTSMIMGFAQNDCWREALEVFRDM-RILGVIPNEVTLASVISSSVHLGGIWEC 174
P + SY +I F + +AL +F +M V P++ T+A+ + S + +
Sbjct: 131 PPRSARSYNILIRSFLRAGHPEDALHLFVEMLDDTAVSPDQHTVANTVKSCSRMCDLSVG 190
Query: 175 RMLHGLVIK--LMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFA 232
R + K M+D FV+ S L++MY C +V A L
Sbjct: 191 RGVQAYAFKRGFMVDQFVLNS--LIHMYASCGDVVAAHVL-------------------- 228
Query: 233 KAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVD 292
F + K V++W MI GY++ E + M++ ML ++V ++
Sbjct: 229 -----------FHTVQVKGVIAWNAMIAGYVKNGDWKEVVEMFKGMLEVRAPFDEVTLLS 277
Query: 293 LISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDH 352
+ +ACGR G I + G + ++ YA CG ++
Sbjct: 278 VATACGRLGDANLGQWIAEYAEEKGMLRSRNLATALVDMYAKCGELD------------- 324
Query: 353 IASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVD 412
AR+LF+ M RDV +WSAMISGY Q+++ AL +F+ M
Sbjct: 325 ------------------KARRLFDRMHSRDVVAWSAMISGYTQSDRCREALAIFNEMQG 366
Query: 413 AGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINT 472
V PN++TMVSV A A G L+ G+W H Y+ + L L A++D YAKCG I
Sbjct: 367 TEVNPNDVTMVSVLSACAVLGALETGKWVHSYIRRKDLPLTVILGTALVDFYAKCGCIKD 426
Query: 473 AFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTC 532
A + F + R T W A+I G+A +G + L+++S + + NI+ +TFIGVL C
Sbjct: 427 AVKAFESMPVRNTWT--WTALIKGMASNGRSREALELFSSMLEANIEPTDVTFIGVLLAC 484
Query: 533 CHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVI 592
H LV+ G R+F SM Y + P ++HYGCMVDLLGRAG +++A + IR+MP++ + V+
Sbjct: 485 SHGCLVEEGRRHFTSMTQDYGICPRIEHYGCMVDLLGRAGLIDEAYQFIRNMPIEPNAVV 544
Query: 593 WGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRD 652
W LL+A +H NVE+GE A K + L P H + +LLSN YA G+W++A +RKEM++
Sbjct: 545 WRALLSACTVHKNVEIGEEALKQIVPLDPCHSGNYILLSNTYASVGQWKNAAMVRKEMKE 604
Query: 653 CGMKRLPGFS 662
G++++PG S
Sbjct: 605 KGVEKIPGCS 614
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 124/512 (24%), Positives = 211/512 (41%), Gaps = 110/512 (21%)
Query: 2 PLDHFHSVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQ 61
P D H +F + S + + + ++ CS +S G+ + + FK G + F+
Sbjct: 151 PEDALH-LFVEMLDDTAVSPDQHTVANTVKSCSRMCDLSVGRGVQAYAFKRGFMVDQFVL 209
Query: 62 NSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCV 121
NSLI++YA CG D VA +++ F +K +
Sbjct: 210 NSLIHMYASCG---------------DVVAAHVL----------------FHTVQVKGVI 238
Query: 122 SYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLG----GIW--ECR 175
++ +MI G+ +N W+E +E+F+ M + +EVTL SV ++ LG G W E
Sbjct: 239 AWNAMIAGYVKNGDWKEVVEMFKGMLEVRAPFDEVTLLSVATACGRLGDANLGQWIAEYA 298
Query: 176 MLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAG 235
G++ + +T L++MY C L +AR LFD M R++V+W+ M
Sbjct: 299 EEKGMLRSRNL------ATALVDMYAKCGELDKARRLFDRMHSRDVVAWSAM-------- 344
Query: 236 LVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLIS 295
I GY Q +R EAL ++ M + PNDV +V ++S
Sbjct: 345 -----------------------ISGYTQSDRCREALAIFNEMQGTEVNPNDVTMVSVLS 381
Query: 296 ACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIAS 355
AC A G +HS I + + ++ FYA CG I A FE + +
Sbjct: 382 ACAVLGALETGKWVHSYIRRKDLPLTVILGTALVDFYAKCGCIKDAVKAFESMPVRNTWT 441
Query: 356 WNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGV 415
W ALI G NG + ALELF M++A +
Sbjct: 442 WTALIKGMASNGRSRE-------------------------------ALELFSSMLEANI 470
Query: 416 KPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLS--AAIIDMYAKCGSINTA 473
+P ++T + V A + ++EGR H + + + ++D+ + G I+ A
Sbjct: 471 EPTDVTFIGVLLACSHGCLVEEGR-RHFTSMTQDYGICPRIEHYGCMVDLLGRAGLIDEA 529
Query: 474 FEVFYHIRDRTTSVSPWNAIICGLAMHGDANL 505
++ ++ +V W A++ +H + +
Sbjct: 530 YQFIRNMPIEPNAVV-WRALLSACTVHKNVEI 560
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 111/287 (38%), Gaps = 49/287 (17%)
Query: 8 SVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINL 67
++FN + N + ++ +VS L C+ A+ G+ +HS I + L + +L++
Sbjct: 359 AIFNEMQGTEVNPN-DVTMVSVLSACAVLGALETGKWVHSYIRRKDLPLTVILGTALVDF 417
Query: 68 YAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMI 127
YAKCG I DA + F+ P++ ++T++I
Sbjct: 418 YAKCGCI-------------------------------KDAVKAFESMPVRNTWTWTALI 446
Query: 128 MGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMID 187
G A N REALE+F M + P +VT V+ + H G + E H M
Sbjct: 447 KGMASNGRSREALELFSSMLEANIEPTDVTFIGVLLACSH-GCLVEEGRRH---FTSMTQ 502
Query: 188 GFVIISTNLLNMYCVCSSLVEARSLFDEMK--------ERNIVSWNVMLNGFAKAGLVEL 239
+ I + Y L+ L DE E N V W +L+ VE+
Sbjct: 503 DYGICPR--IEHYGCMVDLLGRAGLIDEAYQFIRNMPIEPNAVVWRALLSACTVHKNVEI 560
Query: 240 ARELFERIPSKDVVSWGTMI---DGYLQVERLSEALTMYRAMLCDGI 283
E ++I D G I + Y V + A + + M G+
Sbjct: 561 GEEALKQIVPLDPCHSGNYILLSNTYASVGQWKNAAMVRKEMKEKGV 607
>gi|449519454|ref|XP_004166750.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g22410, mitochondrial-like [Cucumis sativus]
Length = 552
Score = 303 bits (777), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 187/579 (32%), Positives = 300/579 (51%), Gaps = 34/579 (5%)
Query: 87 LDPVACNIMISGY-IRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRD 145
+DP + + +I Y + L A VF++ + + MI G +++D +A+ +
Sbjct: 3 IDPSSISEVIKHYALSPQSLPKAHFVFNQIQRPTLLVWNHMIHGLSKSDRPNDAIHFYNT 62
Query: 146 MRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSS 205
M G+ + +T + S + + + +M+ +KL + +S L++MY
Sbjct: 63 MYYKGIQGSHLTFIFLFKSCARVSDVRQGQMVRVHSMKLGFESXSFVSNALIHMYVCFGE 122
Query: 206 LVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQV 265
L A+ +FD M E +DVVSW ++I GY Q
Sbjct: 123 LAMAQKVFDGMLE-------------------------------RDVVSWNSIICGYYQF 151
Query: 266 ERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQ 325
R + L ++R M + + V ++ ISA + G + I + G ++
Sbjct: 152 NRFKKVLDLFREMQAINVRADSVTMMKAISATCFLSEWEMGDYLVKYIDEHGVVVDLYLG 211
Query: 326 ATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVY 385
T+I Y G I+ A F + +I SWNA+I G+ + G + A++LFN M RDV
Sbjct: 212 NTLIDMYGRRGMIDFAGRVFYQMKEKNIVSWNAMIMGYAKVGNLVAAKKLFNEMPSRDVI 271
Query: 386 SWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYV 445
SW++MI GY+ +Q A++LF M+ + VKP+EIT+ + A A G+L G H+Y+
Sbjct: 272 SWTSMIIGYSLAKQHAEAVKLFQEMMVSMVKPDEITVATALSACAHLGSLDAGEAVHDYI 331
Query: 446 LNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANL 505
+ I + + ++IDMY KCG + A +VF ++ R SVS W +II GLA++G A
Sbjct: 332 RKHDIKSDVFVGNSLIDMYCKCGVVEKALQVFNDMKTRD-SVS-WTSIISGLAVNGFAES 389
Query: 506 TLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMV 565
L ++ + K I TF+GVL C H GLVD G +FKSM++ Y + P++KHYGC+V
Sbjct: 390 ALNVFDQMLKEGICPTHGTFVGVLLACAHVGLVDKGVEHFKSMENTYRLAPEMKHYGCVV 449
Query: 566 DLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGP 625
DLL R+G L+ A I+ MP+ DVVIW LL+A ++HGN+ + E +K L L PS+
Sbjct: 450 DLLCRSGYLDMAYNFIKKMPIVPDVVIWRILLSACKLHGNLVLAEIVSKKLLVLDPSNNG 509
Query: 626 SRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
+ VL S+ YA + RW+D IRK M +++ +S +
Sbjct: 510 NYVLSSSTYAGSDRWDDVIKIRKLMEVTNLQKPCAYSSI 548
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 132/515 (25%), Positives = 229/515 (44%), Gaps = 84/515 (16%)
Query: 2 PLDHFHSVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQ 61
P D H +Q S L + + C+ V QGQ + K G ES +F+
Sbjct: 53 PNDAIHFYNTMYYKGIQGS--HLTFIFLFKSCARVSDVRQGQMVRVHSMKLGFESXSFVS 110
Query: 62 NSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCV 121
N+LI++Y G ++ A+ +FD G + D V
Sbjct: 111 NALIHMYVCFGELAMAQKVFD---------------GMLERD----------------VV 139
Query: 122 SYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLG----GIWECRML 177
S+ S+I G+ Q + +++ L++FR+M+ + V + VT+ IS++ L G + + +
Sbjct: 140 SWNSIICGYYQFNRFKKVLDLFREMQAINVRADSVTMMKAISATCFLSEWEMGDYLVKYI 199
Query: 178 --HGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAG 235
HG+V+ L + L++MY + A +F +MKE+NIVSWN M+ G+AK G
Sbjct: 200 DEHGVVVDLYL------GNTLIDMYGRRGMIDFAGRVFYQMKEKNIVSWNAMIMGYAKVG 253
Query: 236 LVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLIS 295
+ A++LF +PS+DV+SW +MI GY ++ +EA+ +++ M+ + P+++ + +S
Sbjct: 254 NLVAAKKLFNEMPSRDVISWTSMIIGYSLAKQHAEAVKLFQEMMVSMVKPDEITVATALS 313
Query: 296 ACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQF-ELGIKDHIA 354
AC + G +H I K F+ ++I Y CG + A F ++ +D +
Sbjct: 314 ACAHLGSLDAGEAVHDYIRKHDIKSDVFVGNSLIDMYCKCGVVEKALQVFNDMKTRDSV- 372
Query: 355 SWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAG 414
SW ++I+G NG E A +F+ M K G
Sbjct: 373 SWTSIISGLAVNGFAESALNVFDQMLKE-------------------------------G 401
Query: 415 VKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLS--AAIIDMYAKCGSINT 472
+ P T V V A A G + +G H + N+ L + ++D+ + G ++
Sbjct: 402 ICPTHGTFVGVLLACAHVGLVDKGV-EHFKSMENTYRLAPEMKHYGCVVDLLCRSGYLDM 460
Query: 473 AFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTL 507
A+ F V W ++ +HG NL L
Sbjct: 461 AYN-FIKKMPIVPDVVIWRILLSACKLHG--NLVL 492
>gi|449440387|ref|XP_004137966.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Cucumis sativus]
Length = 792
Score = 303 bits (777), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 179/577 (31%), Positives = 292/577 (50%), Gaps = 66/577 (11%)
Query: 88 DPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMR 147
D +A N +IS Y + ++ DA VF + IK +S+ SMI GF+Q EAL FR+M
Sbjct: 233 DLIAQNALISMYTKFSQMADAINVFSRIIIKDLISWGSMIAGFSQLGYELEALCHFREML 292
Query: 148 ILGVI-PNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSL 206
V PNE S S+ L R +HGL IK + + +L +MY
Sbjct: 293 SQSVYQPNEFVFGSAFSACSKLLEPDCGRQIHGLCIKFGLGSDLFAGCSLCDMY------ 346
Query: 207 VEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVE 266
AK G +E AR +F I D+V+W +I G+ V
Sbjct: 347 -------------------------AKCGFLESARTVFYHIEKPDLVAWNAIIAGFASVS 381
Query: 267 RLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQA 326
E+ + + M G+ PNDV ++ L+ AC + G+Q+HS IVK GF+ +
Sbjct: 382 NAKESSSFFSQMRHTGLVPNDVTVLSLLCACSEPVMLNHGIQVHSYIVKMGFNLDIPVCN 441
Query: 327 TIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNM-QKRDVY 385
+++ Y+ C +N DA Q+F ++ K D+
Sbjct: 442 SLLSMYSKCSNLN-------------------------------DALQVFEDIGNKADIV 470
Query: 386 SWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYV 445
SW+ +++ Q Q L L M + +KP+ +T+ +V + + + G H ++
Sbjct: 471 SWNTLLTACLQQNQAGEVLRLTKLMFASRIKPDHVTLTNVLVSSGQIASYEVGSQIHCFI 530
Query: 446 LNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANL 505
+ + + L+ ++S A+I+MY KCGS+ A ++F I + + W+++I G A G
Sbjct: 531 MKSGLNLDISVSNALINMYTKCGSLECARKMFDSIGN--PDIISWSSLIVGYAQAGCGKE 588
Query: 506 TLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMV 565
+++ + +K N ITF+G+L+ C H G+V+ G + +++M+ Y + P +H CMV
Sbjct: 589 AFELFRTMRGLGVKPNEITFVGILTACSHIGMVEEGLKLYRTMQEDYRISPTKEHCSCMV 648
Query: 566 DLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGP 625
DLL RAG L+ AE+ I+ MP DVV+W TLLAA ++HGN+EVG+RAA+++ + PS+
Sbjct: 649 DLLARAGCLDVAEDFIKQMPFVPDVVVWKTLLAACKVHGNLEVGKRAAENVLKIDPSNSA 708
Query: 626 SRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
+ V+L NI+A +G W+D +R MR + ++PG S
Sbjct: 709 AVVMLCNIHASSGHWKDFARLRSSMRRMDVGKVPGQS 745
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 149/626 (23%), Positives = 261/626 (41%), Gaps = 133/626 (21%)
Query: 33 CSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVAC 92
CS+ ++ G++IH + + + +QN ++++Y KCG
Sbjct: 108 CSSLRSLEHGRKIHRHMLTCNYQPDMILQNHILSMYGKCG-------------------- 147
Query: 93 NIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVI 152
L +AR +FD P+K VS+TSMI G+++ A+ ++ M G I
Sbjct: 148 -----------SLKEARNMFDSMPLKNVVSWTSMISGYSRYGEEDNAITLYVQMLRSGHI 196
Query: 153 PNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSL 212
P+ T S++ S L R LH V+K +I L++MY +
Sbjct: 197 PDHFTFGSIVKSCSGLDDFKLARQLHAHVLKSEFGADLIAQNALISMY----------TK 246
Query: 213 FDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEAL 272
F +M + A +F RI KD++SWG+MI G+ Q+ EAL
Sbjct: 247 FSQMAD---------------------AINVFSRIIIKDLISWGSMIAGFSQLGYELEAL 285
Query: 273 TMYRAMLCDGI-APNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHF 331
+R ML + PN+ + SAC + + G QIH + +K G F ++
Sbjct: 286 CHFREMLSQSVYQPNEFVFGSAFSACSKLLEPDCGRQIHGLCIKFGLGSDLFAGCSLCDM 345
Query: 332 YAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMI 391
YA CG +E AR +F +++K D+ +W+A+I
Sbjct: 346 YAKCG-------------------------------FLESARTVFYHIEKPDLVAWNAII 374
Query: 392 SGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSIT 451
+G+A + F M G+ PN++T++S+ CA + L G H Y++
Sbjct: 375 AGFASVSNAKESSSFFSQMRHTGLVPNDVTVLSLLCACSEPVMLNHGIQVHSYIVKMGFN 434
Query: 452 LNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYS 511
L+ + +++ MY+KC ++N A +VF I ++ VS WN ++ A L++
Sbjct: 435 LDIPVCNSLLSMYSKCSNLNDALQVFEDIGNKADIVS-WNTLLTACLQQNQAGEVLRLTK 493
Query: 512 DLEKRNIKLNSITFIGVLSTCCHAGLVDLGER-YFKSMKSVYNVEPDLKHYGCMVDLLGR 570
+ IK + +T VL + ++G + + MKS N+ D+ ++++ +
Sbjct: 494 LMFASRIKPDHVTLTNVLVSSGQIASYEVGSQIHCFIMKSGLNL--DISVSNALINMYTK 551
Query: 571 AGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLL 630
G LE A ++ S+ D++ W +L+
Sbjct: 552 CGSLECARKMFDSIG-NPDIISWSSLIVG------------------------------- 579
Query: 631 SNIYADAGRWEDAFSIRKEMRDCGMK 656
YA AG ++AF + + MR G+K
Sbjct: 580 ---YAQAGCGKEAFELFRTMRGLGVK 602
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 118/482 (24%), Positives = 203/482 (42%), Gaps = 96/482 (19%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E SA CS + G+QIH L K GL S+ F SL ++YAKCG + A+++F
Sbjct: 301 EFVFGSAFSACSKLLEPDCGRQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLESARTVFY 360
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
D VA N ++I GFA +E+
Sbjct: 361 HIEKPDLVAWN-------------------------------AIIAGFASVSNAKESSSF 389
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
F MR G++PN+VT+ S++ + + +H ++K+ + + + +LL+MY
Sbjct: 390 FSQMRHTGLVPNDVTVLSLLCACSEPVMLNHGIQVHSYIVKMGFNLDIPVCNSLLSMYSK 449
Query: 203 CSSLVEARSLFDEMKER-NIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDG 261
CS+L +A +F+++ + +IVSWN T++
Sbjct: 450 CSNLNDALQVFEDIGNKADIVSWN-------------------------------TLLTA 478
Query: 262 YLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCY 321
LQ + E L + + M I P+ V + +++ + G+ ++ G QIH I+K+G +
Sbjct: 479 CLQQNQAGEVLRLTKLMFASRIKPDHVTLTNVLVSSGQIASYEVGSQIHCFIMKSGLNLD 538
Query: 322 DFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQK 381
+ +I+ Y CG + AR F+ I SW++LI G+ + G ++
Sbjct: 539 ISVSNALINMYTKCGSLECARKMFDSIGNPDIISWSSLIVGYAQAGCGKE---------- 588
Query: 382 RDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWA 441
A ELF M GVKPNEIT V + A + G ++EG
Sbjct: 589 ---------------------AFELFRTMRGLGVKPNEITFVGILTACSHIGMVEEGLKL 627
Query: 442 HEYVLNN-SITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMH 500
+ + + I+ + ++D+ A+ G ++ A E F V W ++ +H
Sbjct: 628 YRTMQEDYRISPTKEHCSCMVDLLARAGCLDVA-EDFIKQMPFVPDVVVWKTLLAACKVH 686
Query: 501 GD 502
G+
Sbjct: 687 GN 688
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 89/392 (22%), Positives = 162/392 (41%), Gaps = 75/392 (19%)
Query: 8 SVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINL 67
S F SQ + ++ ++S L CS + ++ G Q+HS I K G
Sbjct: 387 SSFFSQMRHTGLVPNDVTVLSLLCACSEPVMLNHGIQVHSYIVKMGF------------- 433
Query: 68 YAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKC-CVSYTSM 126
LD CN ++S Y + LNDA +VF+ K VS+ ++
Sbjct: 434 ------------------NLDIPVCNSLLSMYSKCSNLNDALQVFEDIGNKADIVSWNTL 475
Query: 127 IMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMI 186
+ Q + E L + + M + P+ VTL +V+ SS + +H ++K +
Sbjct: 476 LTACLQQNQAGEVLRLTKLMFASRIKPDHVTLTNVLVSSGQIASYEVGSQIHCFIMKSGL 535
Query: 187 DGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFER 246
+ + +S L+NMY C G +E AR++F+
Sbjct: 536 NLDISVSNALINMYTKC-------------------------------GSLECARKMFDS 564
Query: 247 IPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEG 306
I + D++SW ++I GY Q EA ++R M G+ PN++ V +++AC EG
Sbjct: 565 IGNPDIISWSSLIVGYAQAGCGKEAFELFRTMRGLGVKPNEITFVGILTACSHIGMVEEG 624
Query: 307 LQIHSI------IVKAGFDCYDFIQATIIHFYAACGRINLAR-LQFELGIKDHIASWNAL 359
L+++ I C + ++ A G +++A ++ + W L
Sbjct: 625 LKLYRTMQEDYRISPTKEHC-----SCMVDLLARAGCLDVAEDFIKQMPFVPDVVVWKTL 679
Query: 360 IAGFIRNGMIEDARQLFNNMQKRDVYSWSAMI 391
+A +G +E ++ N+ K D + +A++
Sbjct: 680 LAACKVHGNLEVGKRAAENVLKIDPSNSAAVV 711
>gi|449441574|ref|XP_004138557.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 766
Score = 303 bits (777), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 181/640 (28%), Positives = 310/640 (48%), Gaps = 92/640 (14%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
+ A L+ C ++ G +H+ I G S+TF+ +L+N+YAK
Sbjct: 171 QFAYSGILQICIGLDSIELGNMVHAQIVIRGFTSHTFVSTALLNMYAKL----------- 219
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+ D+ +VF+ VS+ +MI GF ND + +A ++
Sbjct: 220 --------------------QEIEDSYKVFNTMTEVNVVSWNAMITGFTSNDLYLDAFDL 259
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
F M GV P+ T V + L + + + + G ++L +D ++ T L++M
Sbjct: 260 FLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEVSGYALELGVDSNTLVGTALIDMNSK 319
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
C SL EARS+F+ I + W MI GY
Sbjct: 320 CGSLQEARSIFNS-----------------------------HFITCRFNAPWNAMISGY 350
Query: 263 LQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD 322
L+ +AL ++ M + I + + +A G ++H+ +K+G +
Sbjct: 351 LRSGFNEKALELFAKMCQNDIYLDHYTYCSVFNAIAALKCLSLGKKVHARAIKSGLEV-- 408
Query: 323 FIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKR 382
++++ NA+ + + G +ED R++FN M+ R
Sbjct: 409 ----------------------------NYVSISNAVANAYAKCGSLEDVRKVFNRMEDR 440
Query: 383 DVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAH 442
D+ SW+++++ Y+Q + + A+E+F M G+ PN+ T SV + A+ L+ G+ H
Sbjct: 441 DLISWTSLVTAYSQCSEWDKAIEIFSNMRAEGIAPNQFTFSSVLVSCANLCLLEYGQQVH 500
Query: 443 EYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGD 502
+ + ++ + +A++DMYAKCG + A +VF I + T W AII G A HG
Sbjct: 501 GIICKVGLDMDKCIESALVDMYAKCGCLGDAKKVFNRISNADTV--SWTAIIAGHAQHGI 558
Query: 503 ANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYG 562
+ L+++ + + ++ N++TF+ VL C H GLV+ G +YFK MK Y + P+++HY
Sbjct: 559 VDDALQLFRRMVQLGVEPNAVTFLCVLFACSHGGLVEEGLQYFKLMKKTYGLVPEMEHYA 618
Query: 563 CMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPS 622
C+VDLL R G L DA E I MP++ + ++W TLL A R+HGNVE+GE AA+ + +
Sbjct: 619 CIVDLLSRVGHLNDAMEFISRMPVEPNEMVWQTLLGACRVHGNVELGELAAQKILSFKAE 678
Query: 623 HGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
+ + VLLSN Y ++G ++D S+R M++ G+K+ PG S
Sbjct: 679 NSATYVLLSNTYIESGSYKDGLSLRHLMKEQGVKKEPGCS 718
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 142/605 (23%), Positives = 254/605 (41%), Gaps = 107/605 (17%)
Query: 11 NSQKANLQNSDYEL-ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYA 69
NS K + +S ++ LV LR C + Q + +H + KS ++ +SL+
Sbjct: 55 NSVKVDKTDSHLQIQPLVDLLRDCVDARFLKQAKTVHGFLLKSKFSNH----HSLV---- 106
Query: 70 KCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMG 129
L++ + CS +D AC + FD+ + S+T +I G
Sbjct: 107 ---LLNHVAHAYSKCSDIDA-ACRL-----------------FDQMSQRNTFSWTVLIAG 145
Query: 130 FAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGF 189
A+N + + E F +M+ G+ P++ + ++ + L I M+H ++
Sbjct: 146 LAENGLFLDGFEFFCEMQSQGIFPDQFAYSGILQICIGLDSIELGNMVHAQIVIRGFTSH 205
Query: 190 VIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPS 249
+ST LLNMY + ++ +F+ M E N+VSWN M+ GF L A +LF R
Sbjct: 206 TFVSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMITGFTSNDLYLDAFDLFLR--- 262
Query: 250 KDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQI 309
M+ +G+ P+ + + A G + ++
Sbjct: 263 ----------------------------MMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEV 294
Query: 310 HSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHI------ASWNALIAGF 363
++ G D + +I + CG + AR F H A WNA+I+G+
Sbjct: 295 SGYALELGVDSNTLVGTALIDMNSKCGSLQEARSIF----NSHFITCRFNAPWNAMISGY 350
Query: 364 IRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMV 423
+R+G E A +LF M + D+Y + T
Sbjct: 351 LRSGFNEKALELFAKMCQNDIY-------------------------------LDHYTYC 379
Query: 424 SVFCAIASSGTLKEGRWAHEYVLNNSITLND-NLSAAIIDMYAKCGSINTAFEVFYHIRD 482
SVF AIA+ L G+ H + + + +N ++S A+ + YAKCGS+ +VF + D
Sbjct: 380 SVFNAIAALKCLSLGKKVHARAIKSGLEVNYVSISNAVANAYAKCGSLEDVRKVFNRMED 439
Query: 483 RTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGE 542
R + W +++ + + + ++I+S++ I N TF VL +C + L++ G+
Sbjct: 440 R--DLISWTSLVTAYSQCSEWDKAIEIFSNMRAEGIAPNQFTFSSVLVSCANLCLLEYGQ 497
Query: 543 RYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRI 602
+ + V ++ D +VD+ + G L DA++V + AD V W ++A
Sbjct: 498 QVHGIICKV-GLDMDKCIESALVDMYAKCGCLGDAKKVFNRIS-NADTVSWTAIIAGHAQ 555
Query: 603 HGNVE 607
HG V+
Sbjct: 556 HGIVD 560
>gi|224121210|ref|XP_002318526.1| predicted protein [Populus trichocarpa]
gi|222859199|gb|EEE96746.1| predicted protein [Populus trichocarpa]
Length = 552
Score = 303 bits (777), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 170/455 (37%), Positives = 244/455 (53%), Gaps = 48/455 (10%)
Query: 209 ARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERL 268
AR LFD+M ER++ SWNVML G+ + ++ AR LFER+P +D+VSW M+ GY Q +
Sbjct: 14 ARDLFDKMPERDLFSWNVMLTGYVRNRDLKTARALFERMPERDIVSWNAMLSGYAQNGFV 73
Query: 269 SEALTMYRAM-LCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQAT 327
EA ++ M L +GI+ N ++
Sbjct: 74 DEAREIFYKMPLKNGISWNGLLAA------------------------------------ 97
Query: 328 IIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSW 387
Y GRI A+ FE + + SWN L+ GF+R R LF+NM +RD SW
Sbjct: 98 ----YVQNGRIEDAKRLFESKMDWTLVSWNCLMGGFVRK-----RRNLFDNMPQRDSISW 148
Query: 388 SAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLN 447
SAMI+GY+QN AL F M + N + ++ L+ GR H ++
Sbjct: 149 SAMIAGYSQNGCSEEALHFFVEMQRDCERLNRSSFTCALSTCSNIAALELGRQLHCRLVK 208
Query: 448 NSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTL 507
+ A++ MY KCGSI+ A + F I ++ V WN +I G A HG L
Sbjct: 209 AGYQTGWYVGNALLAMYCKCGSIDEARDAFQEILEK--DVVSWNTMIHGYARHGFGEEAL 266
Query: 508 KIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDL 567
++ ++ I+ + T + VL+ C HAGLVD G YF SM Y + L HY CMVDL
Sbjct: 267 TVFELMKTTGIRPDDATMVSVLAACSHAGLVDQGSEYFYSMNRDYGITAKLVHYTCMVDL 326
Query: 568 LGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSR 627
LGRAGQLE+A+ ++++MP + D WG LL ASRIHGN E+GE+AA+ + ++P +
Sbjct: 327 LGRAGQLEEAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAQIIFEMEPHNSGMY 386
Query: 628 VLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
+LLS +YA +GRW DA +R EMR+ G+K++PG+S
Sbjct: 387 ILLSKLYAASGRWSDAGKMRLEMRNKGVKKVPGYS 421
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 112/447 (25%), Positives = 193/447 (43%), Gaps = 79/447 (17%)
Query: 64 LINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSY 123
+I+ Y + A+ +FD D + N+M++GY+RN L AR +F++ P + VS+
Sbjct: 1 MISGYLRNHKFDLARDLFDKMPERDLFSWNVMLTGYVRNRDLKTARALFERMPERDIVSW 60
Query: 124 TSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIK 183
+M+ G+AQN EA E+F M + N ++ ++++ V G I
Sbjct: 61 NAMLSGYAQNGFVDEAREIFYKM----PLKNGISWNGLLAAYVQNGRI------------ 104
Query: 184 LMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELAREL 243
+A+ LF+ + +VSWN ++ GF V R L
Sbjct: 105 -----------------------EDAKRLFESKMDWTLVSWNCLMGGF-----VRKRRNL 136
Query: 244 FERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAF 303
F+ +P +D +SW MI GY Q EAL + M D N +S C A
Sbjct: 137 FDNMPQRDSISWSAMIAGYSQNGCSEEALHFFVEMQRDCERLNRSSFTCALSTCSNIAAL 196
Query: 304 GEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGF 363
G Q+H +VKAG+ ++ ++ Y CG I+ AR F+ ++ + SWN +I G+
Sbjct: 197 ELGRQLHCRLVKAGYQTGWYVGNALLAMYCKCGSIDEARDAFQEILEKDVVSWNTMIHGY 256
Query: 364 IRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMV 423
R+G E+ AL +F M G++P++ TMV
Sbjct: 257 ARHGFGEE-------------------------------ALTVFELMKTTGIRPDDATMV 285
Query: 424 SVFCAIASSGTLKEGRWAHEYVLNNSITLNDNL--SAAIIDMYAKCGSINTAFEVFYHIR 481
SV A + +G + +G + Y +N + L ++D+ + G + A + ++
Sbjct: 286 SVLAACSHAGLVDQGS-EYFYSMNRDYGITAKLVHYTCMVDLLGRAGQLEEAQNLMKNMP 344
Query: 482 DRTTSVSPWNAIICGLAMHGDANLTLK 508
+ + W A++ +HG+ L K
Sbjct: 345 FEPDAAT-WGALLGASRIHGNTELGEK 370
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 101/230 (43%), Gaps = 37/230 (16%)
Query: 25 ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSC 84
+ AL CS A+ G+Q+H + K+G ++ ++ N+L+ +Y KCG I +A+ F
Sbjct: 182 SFTCALSTCSNIAALELGRQLHCRLVKAGYQTGWYVGNALLAMYCKCGSIDEARDAFQEI 241
Query: 85 STLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFR 144
D V+ N MI GY R+ GF + EAL VF
Sbjct: 242 LEKDVVSWNTMIHGYARH--------------------------GFGE-----EALTVFE 270
Query: 145 DMRILGVIPNEVTLASVISSSVHLGGIWE-CRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
M+ G+ P++ T+ SV+++ H G + + + + I ++ T ++++
Sbjct: 271 LMKTTGIRPDDATMVSVLAACSHAGLVDQGSEYFYSMNRDYGITAKLVHYTCMVDLLGRA 330
Query: 204 SSLVEARSLFDEMK-ERNIVSWNVMLNGFAKAGLVELARE----LFERIP 248
L EA++L M E + +W +L G EL + +FE P
Sbjct: 331 GQLEEAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAQIIFEMEP 380
>gi|334185093|ref|NP_187175.2| mitochondrial editing factor 19 [Arabidopsis thaliana]
gi|218546759|sp|Q9MA95.2|PP214_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g05240
gi|332640689|gb|AEE74210.1| mitochondrial editing factor 19 [Arabidopsis thaliana]
Length = 565
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 197/640 (30%), Positives = 311/640 (48%), Gaps = 88/640 (13%)
Query: 26 LVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCS 85
++S L C + + ++Q +H L+ KS + N + LI+ C
Sbjct: 9 ILSQLENCRSLVELNQ---LHGLMIKSSVIRNVIPLSRLIDFCTTC-------------- 51
Query: 86 TLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRD 145
P N L+ AR VF+ + SMI G++ + +AL +++
Sbjct: 52 ---PETMN-----------LSYARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQE 97
Query: 146 MRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSS 205
M G P+ T V+ + L I +HG V+K + + +ST LL+MY C
Sbjct: 98 MLRKGYSPDYFTFPYVLKACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCC-- 155
Query: 206 LVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQV 265
G V +FE IP +VV+WG++I G++
Sbjct: 156 -----------------------------GEVNYGLRVFEDIPQWNVVAWGSLISGFVNN 186
Query: 266 ERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQ 325
R S+A+ +R M +G+ N+ ++VDL+ ACGR G H + GFD Y
Sbjct: 187 NRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPY---- 242
Query: 326 ATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVY 385
Q ++G +A+ +LI + + G + AR LF+ M +R +
Sbjct: 243 -----------------FQSKVGFNVILAT--SLIDMYAKCGDLRTARYLFDGMPERTLV 283
Query: 386 SWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYV 445
SW+++I+GY+QN AL +F M+D G+ P+++T +SV A G + G+ H YV
Sbjct: 284 SWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYV 343
Query: 446 LNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANL 505
+ + A+++MYAK G +A + F + + T W +I GLA HG N
Sbjct: 344 SKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIA--WTVVIIGLASHGHGNE 401
Query: 506 TLKIYSDL-EKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCM 564
L I+ + EK N + IT++GVL C H GLV+ G+RYF M+ ++ +EP ++HYGCM
Sbjct: 402 ALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCM 461
Query: 565 VDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHG 624
VD+L RAG+ E+AE ++++MP+K +V IWG LL IH N+E+ +R +A +
Sbjct: 462 VDILSRAGRFEEAERLVKTMPVKPNVNIWGALLNGCDIHENLELTDRIRSMVAEPEELGS 521
Query: 625 PSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
VLLSNIYA AGRW D IR+ M+ + ++ G S V
Sbjct: 522 GIYVLLSNIYAKAGRWADVKLIRESMKSKRVDKVLGHSSV 561
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 92/248 (37%), Gaps = 77/248 (31%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
++ +S +R GQ IH+ + K+G + I +L+N+YAK G AK F+
Sbjct: 317 KVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFE 376
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
D +A +T +I+G A + EAL +
Sbjct: 377 DLEKKDTIA-------------------------------WTVVIIGLASHGHGNEALSI 405
Query: 143 FRDMRILG-VIPNEVTLASVISSSVHLGGI-------WECRMLHGLVIKLMIDGFVIIST 194
F+ M+ G P+ +T V+ + H+G + E R LHGL
Sbjct: 406 FQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGL-------------- 451
Query: 195 NLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVS 254
E + + M++ ++AG E A L + +P K V+
Sbjct: 452 -----------------------EPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVN 488
Query: 255 -WGTMIDG 261
WG +++G
Sbjct: 489 IWGALLNG 496
>gi|357438977|ref|XP_003589765.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478813|gb|AES60016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 960
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 186/641 (29%), Positives = 313/641 (48%), Gaps = 33/641 (5%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+ S ++ C + Q+H+L+ K G T IQNS++ +Y KCG + A+++F
Sbjct: 147 FSFTSVMKACGSLGDSRLAIQLHALVSKLGFGMETCIQNSVVGMYVKCGDVDLAETVFFD 206
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
N MI GY + A ++F++ P + VS+ ++I F+Q+ + L +F
Sbjct: 207 IERPSLFCWNSMIYGYSQMYGPYKALQIFNRMPERDEVSWNTLISIFSQHGFGVQCLAMF 266
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
+M G PN +T SV+S+ + LH ++++ ++ L++MY C
Sbjct: 267 VEMCNQGFSPNFMTYGSVLSACASTSDLKWGAHLHARILRMEHSLDLVFGNGLIDMYAKC 326
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYL 263
L A+ +F ++E + +SWN ++ G GL E
Sbjct: 327 GCLDLAKRVFKSLREHDHISWNSLITGVVHFGLGE------------------------- 361
Query: 264 QVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDF 323
+AL ++ M + ++ ++ ++ C G +H +K+G
Sbjct: 362 ------DALILFNQMRRSSVVLDEFILPTILGVCSGPDYASTGELLHGYTIKSGMGSSAP 415
Query: 324 IQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRD 383
+ II YA CG + A L F L + SW A+I F R+G I AR F+ M +R+
Sbjct: 416 VGNAIITMYAKCGDTDKADLVFRLMPLRNTISWTAMITAFSRSGDIGKARGYFDMMPERN 475
Query: 384 VYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHE 443
+ +W++M+S Y QN L+L+ M GV+P+ IT + A A +K G
Sbjct: 476 IVTWNSMLSTYVQNGFSEEGLKLYVSMRSNGVQPDWITFTTSIRACADLAIVKLGMQVVT 535
Query: 444 YVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDA 503
+ ++LN +++ +I+ MY++CG I A F I D+ + WNA++ A +G
Sbjct: 536 HATKFGLSLNVSVANSIVTMYSRCGLIKEAKNTFDSIDDK--DLISWNAMLAAFAQNGLG 593
Query: 504 NLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGC 563
+ + D+ K K N I+++ VLS C H GLV G+ YF SM V+ + P +H+ C
Sbjct: 594 IKVIDTFEDMLKTECKPNHISYVSVLSGCSHMGLVAEGKHYFDSMTRVFGISPTNEHFSC 653
Query: 564 MVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSH 623
MVDLLGRAG LE A+++I MP K + +W LL + R+H ++ + E AAK L L
Sbjct: 654 MVDLLGRAGLLEQAKDLIEGMPFKPNATVWSALLGSCRVHHDLRLAETAAKKLMELDVEG 713
Query: 624 GPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
VLLSN+Y+++G ++ +RK M+ G++ G S +
Sbjct: 714 SEGYVLLSNMYSESGELDNVADMRKLMKVKGIRTSRGCSWI 754
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 149/537 (27%), Positives = 250/537 (46%), Gaps = 47/537 (8%)
Query: 29 ALRYCS-AHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTL 87
A + CS H + +++H+ + SGL+S+ F+ N+L+++Y+ CGL A +F
Sbjct: 13 AFKQCSFTHKSPHIARKLHAQLILSGLDSSLFLLNNLLHMYSNCGLTHDAFQVFQETHHR 72
Query: 88 DPVACNIMISGYIRNDRLNDAREVFDKTPI--KCCVSYTSMIMGFAQNDCWREALEVF-- 143
+ N MI + + R++DA ++FD+ P+ K VS+T+MI G++QN + E F
Sbjct: 73 NIFTWNTMIRALVSSSRMSDAEKLFDEMPVRVKDSVSWTTMISGYSQNGFHSRSFETFSL 132
Query: 144 --RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYC 201
RD G + + SV+ + LG LH LV KL I +++ MY
Sbjct: 133 MIRDTNDGGKNYDPFSFTSVMKACGSLGDSRLAIQLHALVSKLGFGMETCIQNSVVGMYV 192
Query: 202 VCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDG 261
C + A ++F +++ ++ WN M+ G+++ A ++F R+P +D VSW T+I
Sbjct: 193 KCGDVDLAETVFFDIERPSLFCWNSMIYGYSQMYGPYKALQIFNRMPERDEVSWNTLISI 252
Query: 262 YLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCY 321
+ Q + L M+ M G +PN + ++SAC G +H+ I++
Sbjct: 253 FSQHGFGVQCLAMFVEMCNQGFSPNFMTYGSVLSACASTSDLKWGAHLHARILRMEHSLD 312
Query: 322 DFIQATIIHFYAACGRINLARLQFE-LGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ 380
+I YA CG ++LA+ F+ L DHI SWN+LI G + G+ EDA LFN M+
Sbjct: 313 LVFGNGLIDMYAKCGCLDLAKRVFKSLREHDHI-SWNSLITGVVHFGLGEDALILFNQMR 371
Query: 381 KRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRW 440
+ + V +E + ++ + G
Sbjct: 372 R-------------------------------SSVVLDEFILPTILGVCSGPDYASTGEL 400
Query: 441 AHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMH 500
H Y + + + + + AII MYAKCG + A VF + R T W A+I +
Sbjct: 401 LHGYTIKSGMGSSAPVGNAIITMYAKCGDTDKADLVFRLMPLRNT--ISWTAMITAFSRS 458
Query: 501 GDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPD 557
GD + + +RNI +T+ +LST G + G + + SM+S V+PD
Sbjct: 459 GDIGKARGYFDMMPERNI----VTWNSMLSTYVQNGFSEEGLKLYVSMRS-NGVQPD 510
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 140/283 (49%), Gaps = 5/283 (1%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E L + L CS S G+ +H KSG+ S+ + N++I +YAKCG +A +F
Sbjct: 379 EFILPTILGVCSGPDYASTGELLHGYTIKSGMGSSAPVGNAIITMYAKCGDTDKADLVFR 438
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+ ++ MI+ + R+ + AR FD P + V++ SM+ + QN E L++
Sbjct: 439 LMPLRNTISWTAMITAFSRSGDIGKARGYFDMMPERNIVTWNSMLSTYVQNGFSEEGLKL 498
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
+ MR GV P+ +T + I + L + + K + V ++ +++ MY
Sbjct: 499 YVSMRSNGVQPDWITFTTSIRACADLAIVKLGMQVVTHATKFGLSLNVSVANSIVTMYSR 558
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGL----VELARELFERIPSKDVVSWGTM 258
C + EA++ FD + +++++SWN ML FA+ GL ++ ++ + + +S+ ++
Sbjct: 559 CGLIKEAKNTFDSIDDKDLISWNAMLAAFAQNGLGIKVIDTFEDMLKTECKPNHISYVSV 618
Query: 259 IDGYLQVERLSEALTMYRAML-CDGIAPNDVMIVDLISACGRA 300
+ G + ++E + +M GI+P + ++ GRA
Sbjct: 619 LSGCSHMGLVAEGKHYFDSMTRVFGISPTNEHFSCMVDLLGRA 661
>gi|345505234|gb|AEN99841.1| chlororespiratory reduction 4, partial [Raphanus sativus]
Length = 577
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 189/535 (35%), Positives = 293/535 (54%), Gaps = 51/535 (9%)
Query: 137 REALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNL 196
R+AL +F M GV+ ++ +++ V+ + LG E +HG +IK + + L
Sbjct: 75 RKALLLFCLMLENGVLVDKFSMSLVLKACSRLGFAKEGMQVHGFLIKSRTWSDLFLQNCL 134
Query: 197 LNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIP--SKDVVS 254
+ +Y C L AR +FD M +R+ VS+N M++G+ K GLVE A ELF+ +P +++++
Sbjct: 135 IGLYLKCGCLGFARQVFDRMPQRDSVSYNSMIDGYVKCGLVESAGELFDLMPREKRNLIT 194
Query: 255 WGTMIDGYLQ-VERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSII 313
W +MI GY Q + ++ A ++ M P DLIS
Sbjct: 195 WNSMIGGYAQRADGVNVASKLFDEM------PEK----DLIS------------------ 226
Query: 314 VKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDAR 373
++I Y GRI A+ F++ + + +W +I G+ + G++ A+
Sbjct: 227 -----------WNSMIGGYVKHGRIEDAKGLFDVMPRRDVVTWAIMIDGYGKLGLVHQAK 275
Query: 374 QLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGM-VDAGVKPNEITMVSVFCAIASS 432
LF+ M RDV ++++M+SG+ QN ALE+F+ M ++ + P+E T+V V AIA
Sbjct: 276 TLFDQMPHRDVVAYNSMMSGFVQNRYHIEALEVFNHMEKESHLSPDETTLVIVLSAIAQL 335
Query: 433 GTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNA 492
G L + H Y++ L+ L A+IDMY+KCGSI A VF I + S+ WNA
Sbjct: 336 GRLTKAIDMHLYIVEKRFLLSGKLGVALIDMYSKCGSIQHAMRVFEGIESK--SIDHWNA 393
Query: 493 IICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVY 552
+I GLA+HG + +E+R+IK + ITF+GVL+ C H+GLV G F+ M+ +
Sbjct: 394 MIGGLAVHGLGESAFDMLLQIERRSIKPDHITFVGVLNACSHSGLVKEGLLCFELMRRKH 453
Query: 553 NVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERA 612
+EP L+HYGCMVD+L R+G +E A+ +I MP++ + VIW T L A H E GE
Sbjct: 454 KIEPRLQHYGCMVDILARSGSIELAKNLIEEMPIEPNDVIWRTFLNACSHHKEFETGELV 513
Query: 613 AKSL---AGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
AK L AG PS S VLLSN+YA G W+D +R M++ +++LPG S +
Sbjct: 514 AKHLILQAGYNPS---SYVLLSNMYASNGMWKDVRRVRTMMKEKKIEKLPGCSWI 565
Score = 118 bits (296), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 107/406 (26%), Positives = 181/406 (44%), Gaps = 72/406 (17%)
Query: 40 SQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGY 99
+ G + S +F E + NS+I Y K G I AK +FD D V IMI GY
Sbjct: 206 ADGVNVASKLFDEMPEKDLISWNSMIGGYVKHGRIEDAKGLFDVMPRRDVVTWAIMIDGY 265
Query: 100 IRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDM-RILGVIPNEVTL 158
+ ++ A+ +FD+ P + V+Y SM+ GF QN EALEVF M + + P+E TL
Sbjct: 266 GKLGLVHQAKTLFDQMPHRDVVAYNSMMSGFVQNRYHIEALEVFNHMEKESHLSPDETTL 325
Query: 159 ASVISSSVHLGGIWECRMLHGLVI--KLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEM 216
V+S+ LG + + +H ++ + ++ G + ++ L++MY C S+ A +F+ +
Sbjct: 326 VIVLSAIAQLGRLTKAIDMHLYIVEKRFLLSGKLGVA--LIDMYSKCGSIQHAMRVFEGI 383
Query: 217 KERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYR 276
+ ++I WN M+ G A GL E A D LQ+ER S
Sbjct: 384 ESKSIDHWNAMIGGLAVHGLGESA------------------FDMLLQIERRS------- 418
Query: 277 AMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACG 336
I P+ + V +++AC HS +VK G C++ ++
Sbjct: 419 ------IKPDHITFVGVLNACS-----------HSGLVKEGLLCFELMRR---------- 451
Query: 337 RINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNM--QKRDVYSWSAMISGY 394
+ I+ + + ++ R+G IE A+ L M + DV W ++
Sbjct: 452 ---------KHKIEPRLQHYGCMVDILARSGSIELAKNLIEEMPIEPNDVI-WRTFLNAC 501
Query: 395 AQNEQPNMA-LELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGR 439
+ +++ L H ++ AG P+ ++S AS+G K+ R
Sbjct: 502 SHHKEFETGELVAKHLILQAGYNPSSYVLLSNM--YASNGMWKDVR 545
>gi|449437737|ref|XP_004136647.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like [Cucumis sativus]
Length = 649
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 181/611 (29%), Positives = 321/611 (52%), Gaps = 55/611 (9%)
Query: 60 IQNSLIN-LYAKCGLISQAKSMFDSCSTLDPVA-CNIMISGYIRNDRLNDAREVFDKTPI 117
+ NS+++ ++ C ++ + S S VA N +I+ + ++ +AR+VF++ P
Sbjct: 35 LHNSILSSQFSTCQVVPKISSPVRDFSANSNVARSNWLITQLGKEGKIGEARQVFEEMPD 94
Query: 118 KCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRML 177
+ VS+T++I G+ + EA +F I N VT +++S
Sbjct: 95 RDVVSWTAVITGYIKCGMIEEAKTLFDRN---DAIKNVVTWTALVSG------------- 138
Query: 178 HGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLV 237
Y + + EAR LFD M +N++SWN M+ G+A+ G +
Sbjct: 139 ----------------------YVRWNRIEEARRLFDAMPVKNVISWNTMIEGYARKGWI 176
Query: 238 ELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISAC 297
+ A +LFE++P ++VVSW T+I ++Q R+ EA ++ M + M+ L S
Sbjct: 177 DQALDLFEKMPERNVVSWNTVITAFMQRRRVDEAQELFNRMPERDVISWTTMVAGL-SKN 235
Query: 298 GR---AMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIA 354
GR A + + + +++ T+I YA R++ A FE + ++
Sbjct: 236 GRIDDARLLFDKMPVRNVVS----------WNTMIIGYAQNMRLDEAFKLFEQMPERELS 285
Query: 355 SWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAG 414
SWN +I GFI+NG +E A F M ++V +W+A+ISG+ Q+ + AL++F M A
Sbjct: 286 SWNTMITGFIQNGKLERAVDFFYKMSNKNVVTWTAVISGHVQDGRSEEALKIFSEMQAAN 345
Query: 415 -VKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTA 473
VKPNE T VSV A + L EG+ H+ + ++ +A+I+MY+KCG + A
Sbjct: 346 NVKPNEGTFVSVLGACSKLAALCEGQQIHQIISKTVYQEVADVVSALINMYSKCGELELA 405
Query: 474 FEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCC 533
++F V WN +I A HG + + ++ +++ + +++T+I +LS C
Sbjct: 406 RKIFDDGSIGHRDVVSWNGMIAAYAHHGHGHKAISLFDEMQALGFRPDNVTYIALLSACS 465
Query: 534 HAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIW 593
HAGLVD G + F+++ +++ H+ C+VDL GRAG+L++A + I+ + +K +W
Sbjct: 466 HAGLVDEGLKLFENLVRDRSIKLREDHFTCLVDLFGRAGRLQEAFDFIKGLEVKPSASVW 525
Query: 594 GTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDC 653
LLA +HG++++G+ A+ L +P + + ++LSNIYA G+W +A +R +M+D
Sbjct: 526 AALLAGCNVHGHIDLGKLTAEKLLETEPENAGTYLVLSNIYASTGKWREAAGVRMKMKDK 585
Query: 654 GMKRLPGFSGV 664
G+K+ PG S +
Sbjct: 586 GLKKQPGCSWI 596
Score = 188 bits (478), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 131/484 (27%), Positives = 231/484 (47%), Gaps = 44/484 (9%)
Query: 26 LVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCS 85
+VS + +I ++ +L ++ N +L++ Y + I +A+ +FD+
Sbjct: 97 VVSWTAVITGYIKCGMIEEAKTLFDRNDAIKNVVTWTALVSGYVRWNRIEEARRLFDAMP 156
Query: 86 TLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRD 145
+ ++ N MI GY R ++ A ++F+K P + VS+ ++I F Q EA E+F
Sbjct: 157 VKNVISWNTMIEGYARKGWIDQALDLFEKMPERNVVSWNTVITAFMQRRRVDEAQELFNR 216
Query: 146 MRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSS 205
M VI +A + + G I + R+L K+ + V +T ++ Y
Sbjct: 217 MPERDVISWTTMVAGLSKN----GRIDDARLLFD---KMPVRNVVSWNTMIIG-YAQNMR 268
Query: 206 LVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQV 265
L EA LF++M ER + SWN M+ GF + G +E A + F ++ +K+VV+W +I G++Q
Sbjct: 269 LDEAFKLFEQMPERELSSWNTMITGFIQNGKLERAVDFFYKMSNKNVVTWTAVISGHVQD 328
Query: 266 ERLSEALTMYRAM-LCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFI 324
R EAL ++ M + + PN+ V ++ AC + A EG QIH II K + +
Sbjct: 329 GRSEEALKIFSEMQAANNVKPNEGTFVSVLGACSKLAALCEGQQIHQIISKTVYQEVADV 388
Query: 325 QATIIHFYAACGRINLARLQFELGIKDH--IASWNALIAGFIRNGMIEDARQLFNNMQKR 382
+ +I+ Y+ CG + LAR F+ G H + SWN +IA + +G A LF+ MQ
Sbjct: 389 VSALINMYSKCGELELARKIFDDGSIGHRDVVSWNGMIAAYAHHGHGHKAISLFDEMQA- 447
Query: 383 DVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG-RWA 441
G +P+ +T +++ A + +G + EG +
Sbjct: 448 ------------------------------LGFRPDNVTYIALLSACSHAGLVDEGLKLF 477
Query: 442 HEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHG 501
V + SI L ++ ++D++ + G + AF+ F + S S W A++ G +HG
Sbjct: 478 ENLVRDRSIKLREDHFTCLVDLFGRAGRLQEAFD-FIKGLEVKPSASVWAALLAGCNVHG 536
Query: 502 DANL 505
+L
Sbjct: 537 HIDL 540
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 118/258 (45%), Gaps = 39/258 (15%)
Query: 8 SVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINL 67
+F+ +A E VS L CS A+ +GQQIH +I K+ + + ++LIN+
Sbjct: 336 KIFSEMQAANNVKPNEGTFVSVLGACSKLAALCEGQQIHQIISKTVYQEVADVVSALINM 395
Query: 68 YAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMI 127
Y+KCG + A+ +FD S G+ R+V VS+ MI
Sbjct: 396 YSKCGELELARKIFDDGSI-----------GH---------RDV---------VSWNGMI 426
Query: 128 MGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWE-CRMLHGLV----I 182
+A + +A+ +F +M+ LG P+ VT +++S+ H G + E ++ LV I
Sbjct: 427 AAYAHHGHGHKAISLFDEMQALGFRPDNVTYIALLSACSHAGLVDEGLKLFENLVRDRSI 486
Query: 183 KLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVS-WNVMLNGFAKAGLVELAR 241
KL D F T L++++ L EA ++ + S W +L G G ++L +
Sbjct: 487 KLREDHF----TCLVDLFGRAGRLQEAFDFIKGLEVKPSASVWAALLAGCNVHGHIDLGK 542
Query: 242 ELFERIPSKDVVSWGTMI 259
E++ + + GT +
Sbjct: 543 LTAEKLLETEPENAGTYL 560
>gi|147860004|emb|CAN81045.1| hypothetical protein VITISV_006763 [Vitis vinifera]
Length = 1321
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 190/640 (29%), Positives = 305/640 (47%), Gaps = 96/640 (15%)
Query: 26 LVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCS 85
+ SAL +C V G++ H + K GL S+ F+ SLI++YAKCG + A ++D +
Sbjct: 116 VFSALSFCGREGCVELGRRWHCFVVKIGLGSDEFVCTSLIDMYAKCGEVDSAVRVYDKMT 175
Query: 86 TLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRD 145
+LD CN +IS Y RN GF + +A +VF
Sbjct: 176 SLDAATCNCLISAYARN--------------------------GF-----FVQAFQVFMQ 204
Query: 146 MRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSS 205
+ +G PN T +++++ + I E + LH V+K+ + LL +Y C
Sbjct: 205 IGNMGTRPNHYTYSTMLAVCGTISAIQEGKQLHAHVVKMQYLSETAVGNALLTLYSKC-- 262
Query: 206 LVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQV 265
G++E A +FE + ++++SW I+G+ Q
Sbjct: 263 -----------------------------GMMEEAEIVFESLRQRNIISWTASINGFYQH 293
Query: 266 ERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQ 325
+AL + M GI PN+ ++++CG F +G H+ ++K G F+
Sbjct: 294 GDFKKALKQFSMMRESGIEPNEFTFSIVLASCGCVKDFIDGRMFHTQVIKKGMASGVFVG 353
Query: 326 ATIIHFYAACGRINLARLQF-ELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDV 384
II Y+ G ++ A QF ++G SWNALIAG++ N IE A + F M K DV
Sbjct: 354 TAIIDMYSGLGEMDEAEKQFKQMGRAASNVSWNALIAGYVLNEKIEKAMEAFCRMVKEDV 413
Query: 385 YSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEY 444
NE T ++F A +S +L H
Sbjct: 414 AC-------------------------------NEFTYSNIFKACSSFPSLATTVQIHSR 442
Query: 445 VLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDAN 504
++ +++ N ++++++I+ Y +CGS+ A +VF I D V WN+II + +GD
Sbjct: 443 LIKSNVESNLHVASSLIEAYTQCGSLENAVQVFTQISD--ADVVSWNSIIKAYSQNGDPW 500
Query: 505 LTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCM 564
+ + + + K S TF+ VLS C H+GLV G+ +FKSM Y+++P+ H CM
Sbjct: 501 KAIFLLRKMIEEGNKPTSXTFLTVLSACSHSGLVQEGQEFFKSMVQDYSIQPEETHCSCM 560
Query: 565 VDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHG 624
VD+LGRAGQLE+A + I+ + MK IW LLAA R + N+++ E A+ + L+P+
Sbjct: 561 VDILGRAGQLENALDFIKKLTMKPTASIWRPLLAACRYNSNLQMAEYVAEKILDLEPNDA 620
Query: 625 PSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
V LSN+YA+ GRW DA + R+ M + + PG S +
Sbjct: 621 TVYVTLSNMYAEVGRWADAENQRRLMEQKEISKEPGCSWI 660
Score = 297 bits (761), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 159/477 (33%), Positives = 267/477 (55%), Gaps = 41/477 (8%)
Query: 227 MLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPN 286
+++ + + G + AR+LF++IP+ ++ W + + EAL+ + M +G+ PN
Sbjct: 844 LMSFYTECGQLSNARKLFDKIPNTNIRRWIVLTGACARRGFYEEALSAFSEMQKEGLRPN 903
Query: 287 DVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRI-------- 338
++ ++ ACG G +H++I+K F+ +I + +I+ Y+ CG +
Sbjct: 904 QFVLPSILKACGHLSDRRTGENMHTVILKNSFESDAYIISALIYMYSKCGHVEKACRVFD 963
Query: 339 ---------------------------NLARLQFELGIKDHIASWNALIAGFIRNG---M 368
BL + + G+K ++ SWN LIAGF + G M
Sbjct: 964 WIVDKDLVVMNAMVSGYAQHGFVHEALBLVQKMQQAGVKPNVVSWNTLIAGFSQVGDKSM 1023
Query: 369 IEDARQLFN-NMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFC 427
+ + +L N + DV SW+++ISG+ QN + + F M+D G P+ +T+ S+
Sbjct: 1024 VSEVFRLMTANGVEPDVVSWTSVISGFVQNFHNHEGFDAFKEMLDQGFCPSSVTISSLLP 1083
Query: 428 AIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSV 487
A + L+ G+ H Y + + + + +A++DMYAKCG I+ A +FY + +R T
Sbjct: 1084 ACTNVANLRHGKEIHGYAMVIGVEKDVYVRSALVDMYAKCGYISEAKILFYMMPERNTVT 1143
Query: 488 SPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKS 547
WN++I G A HG N +++++ +E+ + KL+ +TF VL+ C HAG+V+LGE F
Sbjct: 1144 --WNSLIFGYANHGYCNEAIELFNQMEESDTKLDHLTFTAVLNACSHAGMVELGESLFXK 1201
Query: 548 MKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVE 607
M+ Y +EP L+HY CMVDLLGRAG+L +A ++I++MP++ D +WG LL A R HGN+E
Sbjct: 1202 MQEKYRIEPRLEHYACMVDLLGRAGKLSEAYDLIKAMPVEPDKFVWGALLGACRNHGNIE 1261
Query: 608 VGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
+ E AA+ L L+P S +LLSN+YADAGRW +A ++K M+ + PG S +
Sbjct: 1262 LAEVAAEHLFELEPESPGSSLLLSNLYADAGRWGNAAKMKKMMKQRKFGKFPGCSWI 1318
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 90/386 (23%), Positives = 170/386 (44%), Gaps = 70/386 (18%)
Query: 38 AVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMIS 97
A+ +G+ +H+ + GL T+ L++ Y +CG
Sbjct: 818 ALYRGRALHAHLVIIGLARLTYFAAKLMSFYTECG------------------------- 852
Query: 98 GYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVT 157
+L++AR++FDK P + + A+ + EAL F +M+ G+ PN+
Sbjct: 853 ------QLSNARKLFDKIPNTNIRRWIVLTGACARRGFYEEALSAFSEMQKEGLRPNQFV 906
Query: 158 LASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMK 217
L S++ + HL +H +++K + I + L+ MY C + +A +FD +
Sbjct: 907 LPSILKACGHLSDRRTGENMHTVILKNSFESDAYIISALIYMYSKCGHVEKACRVFDWIV 966
Query: 218 ERNIVSWNVMLNGFAKAGLVELARELFERIPS---------------------------- 249
++++V N M++G+A+ G V A +L +++
Sbjct: 967 DKDLVVMNAMVSGYAQHGFVHEALBLVQKMQQAGVKPNVVSWNTLIAGFSQVGDKSMVSE 1026
Query: 250 -----------KDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACG 298
DVVSW ++I G++Q E ++ ML G P+ V I L+ AC
Sbjct: 1027 VFRLMTANGVEPDVVSWTSVISGFVQNFHNHEGFDAFKEMLDQGFCPSSVTISSLLPACT 1086
Query: 299 RAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNA 358
G +IH + G + ++++ ++ YA CG I+ A++ F + + + +WN+
Sbjct: 1087 NVANLRHGKEIHGYAMVIGVEKDVYVRSALVDMYAKCGYISEAKILFYMMPERNTVTWNS 1146
Query: 359 LIAGFIRNGMIEDARQLFNNMQKRDV 384
LI G+ +G +A +LFN M++ D
Sbjct: 1147 LIFGYANHGYCNEAIELFNQMEESDT 1172
Score = 132 bits (332), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 120/512 (23%), Positives = 213/512 (41%), Gaps = 80/512 (15%)
Query: 105 LNDAREVFDKTPIKCCVSYTSMIMGFAQNDCW---REALEVFRD----MRILGVIPNEVT 157
LN+A +F+KTP + VS T +D +EA R+ + G P+
Sbjct: 56 LNNACILFEKTPKRIGVSITESHRSGCTDDPEEGVKEAGFFTRNETPHVEFGGGFPHRQY 115
Query: 158 LASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMK 217
+ S +S G + R H V+K+ + + T+L++MY C + A ++D+M
Sbjct: 116 VFSALSFCGREGCVELGRRWHCFVVKIGLGSDEFVCTSLIDMYAKCGEVDSAVRVYDKMT 175
Query: 218 ERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRA 277
+ + N +++ +A+ G A ++F +I G M
Sbjct: 176 SLDAATCNCLISAYARNGFFVQAFQVFMQI--------GNM------------------- 208
Query: 278 MLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGR 337
G PN +++ CG A EG Q+H+ +VK + + ++ Y+ CG
Sbjct: 209 ----GTRPNHYTYSTMLAVCGTISAIQEGKQLHAHVVKMQYLSETAVGNALLTLYSKCGM 264
Query: 338 INLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQN 397
+ A + FE + +I SW A I GF ++G +
Sbjct: 265 MEEAEIVFESLRQRNIISWTASINGFYQHGDFKK-------------------------- 298
Query: 398 EQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLS 457
AL+ F M ++G++PNE T V + +GR H V+ + +
Sbjct: 299 -----ALKQFSMMRESGIEPNEFTFSIVLASCGCVKDFIDGRMFHTQVIKKGMASGVFVG 353
Query: 458 AAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRN 517
AIIDMY+ G ++ A + F + ++VS WNA+I G ++ ++ + + K +
Sbjct: 354 TAIIDMYSGLGEMDEAEKQFKQMGRAASNVS-WNALIAGYVLNEKIEKAMEAFCRMVKED 412
Query: 518 IKLNSITFIGVLSTCCH----AGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQ 573
+ N T+ + C A V + R KS NVE +L +++ + G
Sbjct: 413 VACNEFTYSNIFKACSSFPSLATTVQIHSRLIKS-----NVESNLHVASSLIEAYTQCGS 467
Query: 574 LEDAEEVIRSMPMKADVVIWGTLLAASRIHGN 605
LE+A +V + ADVV W +++ A +G+
Sbjct: 468 LENAVQVFTQIS-DADVVSWNSIIKAYSQNGD 498
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 136/279 (48%), Gaps = 41/279 (14%)
Query: 13 QKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCG 72
QK L+ + + L S L+ C G+ +H++I K+ ES+ +I ++LI +Y+KCG
Sbjct: 896 QKEGLRPNQF--VLPSILKACGHLSDRRTGENMHTVILKNSFESDAYIISALIYMYSKCG 953
Query: 73 LISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDA------------------------ 108
+ +A +FD D V N M+SGY ++ +++A
Sbjct: 954 HVEKACRVFDWIVDKDLVVMNAMVSGYAQHGFVHEALBLVQKMQQAGVKPNVVSWNTLIA 1013
Query: 109 --REVFDKTPI-------------KCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIP 153
+V DK+ + VS+TS+I GF QN E + F++M G P
Sbjct: 1014 GFSQVGDKSMVSEVFRLMTANGVEPDVVSWTSVISGFVQNFHNHEGFDAFKEMLDQGFCP 1073
Query: 154 NEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLF 213
+ VT++S++ + ++ + + +HG + + ++ V + + L++MY C + EA+ LF
Sbjct: 1074 SSVTISSLLPACTNVANLRHGKEIHGYAMVIGVEKDVYVRSALVDMYAKCGYISEAKILF 1133
Query: 214 DEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDV 252
M ERN V+WN ++ G+A G A ELF ++ D
Sbjct: 1134 YMMPERNTVTWNSLIFGYANHGYCNEAIELFNQMEESDT 1172
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 140/327 (42%), Gaps = 36/327 (11%)
Query: 282 GIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLA 341
G P+ + +S CGR G + H +VK G +F+ ++I YA CG ++ A
Sbjct: 108 GGFPHRQYVFSALSFCGREGCVELGRRWHCFVVKIGLGSDEFVCTSLIDMYAKCGEVDSA 167
Query: 342 RLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPN 401
++ A+ N LI+ + RNG A Q+F MQ
Sbjct: 168 VRVYDKMTSLDAATCNCLISAYARNGFFVQAFQVF--MQ--------------------- 204
Query: 402 MALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAII 461
+ + G +PN T ++ + ++EG+ H +V+ + A++
Sbjct: 205 --------IGNMGTRPNHYTYSTMLAVCGTISAIQEGKQLHAHVVKMQYLSETAVGNALL 256
Query: 462 DMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLN 521
+Y+KCG + A VF +R R ++ W A I G HGD LK +S + + I+ N
Sbjct: 257 TLYSKCGMMEEAEIVFESLRQR--NIISWTASINGFYQHGDFKKALKQFSMMRESGIEPN 314
Query: 522 SITFIGVLSTC-CHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEV 580
TF VL++C C +D R F + + + ++D+ G++++AE+
Sbjct: 315 EFTFSIVLASCGCVKDFID--GRMFHTQVIKKGMASGVFVGTAIIDMYSGLGEMDEAEKQ 372
Query: 581 IRSMPMKADVVIWGTLLAASRIHGNVE 607
+ M A V W L+A ++ +E
Sbjct: 373 FKQMGRAASNVSWNALIAGYVLNEKIE 399
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 60/112 (53%), Gaps = 2/112 (1%)
Query: 5 HFHSVFNSQKANLQNS--DYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQN 62
H H F++ K L + + S L C+ + G++IH G+E + ++++
Sbjct: 1055 HNHEGFDAFKEMLDQGFCPSSVTISSLLPACTNVANLRHGKEIHGYAMVIGVEKDVYVRS 1114
Query: 63 SLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDK 114
+L+++YAKCG IS+AK +F + V N +I GY + N+A E+F++
Sbjct: 1115 ALVDMYAKCGYISEAKILFYMMPERNTVTWNSLIFGYANHGYCNEAIELFNQ 1166
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 103/268 (38%), Gaps = 50/268 (18%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E + + CS+ +++ QIHS + KS +ESN + +SLI Y +CG + A +F
Sbjct: 417 EFTYSNIFKACSSFPSLATTVQIHSRLIKSNVESNLHVASSLIEAYTQCGSLENAVQVFT 476
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
S D V+ N +I Y +N D W+ A+ +
Sbjct: 477 QISDADVVSWNSIIKAYSQN------------------------------GDPWK-AIFL 505
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
R M G P T +V+S+ H G + E + K M+ + I +C
Sbjct: 506 LRKMIEEGNKPTSXTFLTVLSACSHSGLVQEGQEF----FKSMVQDYSIQPE---ETHCS 558
Query: 203 C--------SSLVEARSLFDEMKERNIVS-WNVMLNGFAKAGLVELARELFERI---PSK 250
C L A ++ + S W +L +++A + E+I
Sbjct: 559 CMVDILGRAGQLENALDFIKKLTMKPTASIWRPLLAACRYNSNLQMAEYVAEKILDLEPN 618
Query: 251 DVVSWGTMIDGYLQVERLSEALTMYRAM 278
D + T+ + Y +V R ++A R M
Sbjct: 619 DATVYVTLSNMYAEVGRWADAENQRRLM 646
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 54/253 (21%), Positives = 114/253 (45%), Gaps = 22/253 (8%)
Query: 394 YAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLN 453
+ +NE P++ G P+ + S G ++ GR H +V+ + +
Sbjct: 96 FTRNETPHVEF--------GGGFPHRQYVFSALSFCGREGCVELGRRWHCFVVKIGLGSD 147
Query: 454 DNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSV--SPWNAIICGLAMHGDANLTLKIYS 511
+ + ++IDMYAKCG +++A V+ D+ TS+ + N +I A +G +++
Sbjct: 148 EFVCTSLIDMYAKCGEVDSAVRVY----DKMTSLDAATCNCLISAYARNGFFVQAFQVFM 203
Query: 512 DLEKRNIKLNSITFIGVLSTCCHAGLVDLGER-YFKSMKSVYNVEPDLKHYGCMVDLLGR 570
+ + N T+ +L+ C + G++ + +K Y E + + ++ L +
Sbjct: 204 QIGNMGTRPNHYTYSTMLAVCGTISAIQEGKQLHAHVVKMQYLSETAVGN--ALLTLYSK 261
Query: 571 AGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSH-GPSRVL 629
G +E+AE V S+ + +++ W + HG+ ++A K + ++ S P+
Sbjct: 262 CGMMEEAEIVFESLRQR-NIISWTASINGFYQHGDF---KKALKQFSMMRESGIEPNEFT 317
Query: 630 LSNIYADAGRWED 642
S + A G +D
Sbjct: 318 FSIVLASCGCVKD 330
>gi|224082698|ref|XP_002306801.1| predicted protein [Populus trichocarpa]
gi|222856250|gb|EEE93797.1| predicted protein [Populus trichocarpa]
Length = 787
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 189/617 (30%), Positives = 316/617 (51%), Gaps = 71/617 (11%)
Query: 51 KSGLESNTF-----IQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRL 105
K+G+ +NT+ +Q + + K G+ A ++ S LD N +++ ++R ++
Sbjct: 105 KAGVGANTYTLVAALQACEDSSFKKLGMEIHA-AILKSNQVLDVYVANALVAMHVRFGKM 163
Query: 106 NDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSS 165
+ A +FD+ K +++ SMI GF QN + EAL+ F ++ + P+EV+L S++++S
Sbjct: 164 SYAARIFDELDEKDNITWNSMIAGFTQNGLYNEALQFFCGLQDANLKPDEVSLISILAAS 223
Query: 166 VHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWN 225
LG + + +H +K +D + I L++MY C +
Sbjct: 224 GRLGYLLNGKEIHAYAMKNWLDSNLRIGNTLIDMYSKCCCV------------------- 264
Query: 226 VMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAP 285
A AGLV F+++ +KD++SW T+I Y Q +EAL + R + G+
Sbjct: 265 ------AYAGLV------FDKMINKDLISWTTVIAAYAQNNCHTEALKLLRKVQTKGMDV 312
Query: 286 NDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQF 345
+ +MI + AC ++H +K G +Q II YA CG IN A
Sbjct: 313 DTMMIGSTLLACSGLRCLSHAKEVHGYTLKRGLSDL-MMQNMIIDVYADCGNINYAT--- 368
Query: 346 ELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALE 405
++F +++ +DV SW++MIS Y N N AL
Sbjct: 369 ----------------------------RMFESIKCKDVVSWTSMISCYVHNGLANEALG 400
Query: 406 LFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYA 465
+F+ M + V+P+ IT+VS+ A AS L +G+ H ++ L + +++DMYA
Sbjct: 401 VFYLMKETSVEPDSITLVSILSAAASLSALNKGKEIHGFIFRKGFMLEGSTVNSLVDMYA 460
Query: 466 KCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITF 525
CGS+ A++VF I R+ S+ W +I MHG ++++S +E + + + ITF
Sbjct: 461 CCGSLENAYKVF--ICTRSKSLVLWTTMINAYGMHGRGKAAVELFSIMEDQKLIPDHITF 518
Query: 526 IGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMP 585
+ +L C H+GL++ G+R ++MK Y +EP +HY C+VDLLGRA LE+A ++SM
Sbjct: 519 LALLYACSHSGLINEGKRLLETMKCKYQLEPWPEHYACLVDLLGRANHLEEAYHFVKSMQ 578
Query: 586 MKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFS 645
++ +W L A RIH N ++GE AA+ L L P S VL+SN++A +GRW+D
Sbjct: 579 IEPTAEVWCAFLGACRIHSNKKLGEIAAQKLLDLDPDSPGSYVLISNVFAASGRWKDVEE 638
Query: 646 IRKEMRDCGMKRLPGFS 662
+R M+ G+K+ PG S
Sbjct: 639 VRMRMKGGGLKKNPGCS 655
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 140/576 (24%), Positives = 249/576 (43%), Gaps = 99/576 (17%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
L+ C + +G +IH LI K G +S F+ NSL+++YAKC I A+ +FD
Sbjct: 17 LKACGVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCNDILGARKLFD------- 69
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
R+N+ +V VS+ S+I ++ N EAL +FR+M+
Sbjct: 70 --------------RMNERNDV---------VSWNSIISAYSLNGQCMEALGLFREMQKA 106
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
GV N TL + + + C + + I ++ S +L++Y V ++LV
Sbjct: 107 GVGANTYTLVAALQA---------CEDSSFKKLGMEIHAAILKSNQVLDVY-VANALVAM 156
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLS 269
F +M A +F+ + KD ++W +MI G+ Q +
Sbjct: 157 HVRFGKM---------------------SYAARIFDELDEKDNITWNSMIAGFTQNGLYN 195
Query: 270 EALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATII 329
EAL + + + P++V ++ +++A GR G +IH+ +K D I T+I
Sbjct: 196 EALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNGKEIHAYAMKNWLDSNLRIGNTLI 255
Query: 330 HFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSA 389
Y+ C + A L F+ I + SW +IA
Sbjct: 256 DMYSKCCCVAYAGLVFDKMINKDLISWTTVIA---------------------------- 287
Query: 390 MISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNS 449
YAQN AL+L + G+ + + + S A + L + H Y L
Sbjct: 288 ---AYAQNNCHTEALKLLRKVQTKGMDVDTMMIGSTLLACSGLRCLSHAKEVHGYTLKRG 344
Query: 450 ITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKI 509
++ + + IID+YA CG+IN A +F I+ + V W ++I +G AN L +
Sbjct: 345 LS-DLMMQNMIIDVYADCGNINYATRMFESIKCK--DVVSWTSMISCYVHNGLANEALGV 401
Query: 510 YSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSM-KSVYNVEPDLKHYGCMVDLL 568
+ +++ +++ +SIT + +LS ++ G+ + + + +E +VD+
Sbjct: 402 FYLMKETSVEPDSITLVSILSAAASLSALNKGKEIHGFIFRKGFMLEGST--VNSLVDMY 459
Query: 569 GRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHG 604
G LE+A +V K+ +V+W T++ A +HG
Sbjct: 460 ACCGSLENAYKVFICTRSKS-LVLWTTMINAYGMHG 494
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 114/460 (24%), Positives = 204/460 (44%), Gaps = 80/460 (17%)
Query: 146 MRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSS 205
MR+LGV + T V+ + + I +HGL+IK D V ++ +L++MY C+
Sbjct: 1 MRVLGVPFDSFTFPCVLKACGVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCND 60
Query: 206 LVEARSLFDEMKERN-IVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQ 264
++ AR LFD M ERN +VSWN +++ ++ G
Sbjct: 61 ILGARKLFDRMNERNDVVSWNSIISAYSLNG----------------------------- 91
Query: 265 VERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFI 324
+ EAL ++R M G+ N +V + AC + G++IH+ I+K+ ++
Sbjct: 92 --QCMEALGLFREMQKAGVGANTYTLVAALQACEDSSFKKLGMEIHAAILKSNQVLDVYV 149
Query: 325 QATIIHFYAACGRINL-ARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRD 383
++ + G+++ AR+ EL KD+I +WN++IAGF +NG+
Sbjct: 150 ANALVAMHVRFGKMSYAARIFDELDEKDNI-TWNSMIAGFTQNGLY-------------- 194
Query: 384 VYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHE 443
N AL+ F G+ DA +KP+E++++S+ A G L G+ H
Sbjct: 195 -----------------NEALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNGKEIHA 237
Query: 444 YVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDA 503
Y + N + N + +IDMY+KC + A VF + ++ + W +I A +
Sbjct: 238 YAMKNWLDSNLRIGNTLIDMYSKCCCVAYAGLVFDKMINK--DLISWTTVIAAYAQNNCH 295
Query: 504 NLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVE-----PDL 558
LK+ ++ + + ++++ L C G R K V+ DL
Sbjct: 296 TEALKLLRKVQTKGMDVDTMMIGSTLLACS-------GLRCLSHAKEVHGYTLKRGLSDL 348
Query: 559 KHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLA 598
++D+ G + A + S+ K DVV W ++++
Sbjct: 349 MMQNMIIDVYADCGNINYATRMFESIKCK-DVVSWTSMIS 387
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 102/494 (20%), Positives = 206/494 (41%), Gaps = 98/494 (19%)
Query: 13 QKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCG 72
Q ANL+ E++L+S L + G++IH+ K+ L+SN I N+LI++Y+KC
Sbjct: 205 QDANLKPD--EVSLISILAASGRLGYLLNGKEIHAYAMKNWLDSNLRIGNTLIDMYSKCC 262
Query: 73 LISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQ 132
++ A +FD D ++ +I+ Y AQ
Sbjct: 263 CVAYAGLVFDKMINKDLISWTTVIAAY-------------------------------AQ 291
Query: 133 NDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVII 192
N+C EAL++ R ++ G+ + + + S + + L + + +HG +K + +++
Sbjct: 292 NNCHTEALKLLRKVQTKGMDVDTMMIGSTLLACSGLRCLSHAKEVHGYTLKRGLSD-LMM 350
Query: 193 STNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDV 252
++++Y C ++ A +F+ +K +++VSW M++ + GL
Sbjct: 351 QNMIIDVYADCGNINYATRMFESIKCKDVVSWTSMISCYVHNGLA--------------- 395
Query: 253 VSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSI 312
+EAL ++ M + P+ + +V ++SA A +G +IH
Sbjct: 396 ----------------NEALGVFYLMKETSVEPDSITLVSILSAAASLSALNKGKEIHGF 439
Query: 313 IVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDA 372
I + GF +++ YA CG +E+A
Sbjct: 440 IFRKGFMLEGSTVNSLVDMYACCGS-------------------------------LENA 468
Query: 373 RQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASS 432
++F + + + W+ MI+ Y + + A+ELF M D + P+ IT +++ A + S
Sbjct: 469 YKVFICTRSKSLVLWTTMINAYGMHGRGKAAVELFSIMEDQKLIPDHITFLALLYACSHS 528
Query: 433 GTLKEGRWAHEYV-LNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWN 491
G + EG+ E + + A ++D+ + + A+ ++ T+ W
Sbjct: 529 GLINEGKRLLETMKCKYQLEPWPEHYACLVDLLGRANHLEEAYHFVKSMQIEPTA-EVWC 587
Query: 492 AIICGLAMHGDANL 505
A + +H + L
Sbjct: 588 AFLGACRIHSNKKL 601
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 144/309 (46%), Gaps = 38/309 (12%)
Query: 293 LISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFE-LGIKD 351
++ ACG G +IH +I+K G+D F+ +++ YA C I AR F+ + ++
Sbjct: 16 VLKACGVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCNDILGARKLFDRMNERN 75
Query: 352 HIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMV 411
+ SWN++I+ + NG +A LF MQK
Sbjct: 76 DVVSWNSIISAYSLNGQCMEALGLFREMQK------------------------------ 105
Query: 412 DAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSIN 471
AGV N T+V+ A S K G H +L ++ L+ ++ A++ M+ + G ++
Sbjct: 106 -AGVGANTYTLVAALQACEDSSFKKLGMEIHAAILKSNQVLDVYVANALVAMHVRFGKMS 164
Query: 472 TAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLST 531
A +F + ++ WN++I G +G N L+ + L+ N+K + ++ I +L+
Sbjct: 165 YAARIFDELDEKDNIT--WNSMIAGFTQNGLYNEALQFFCGLQDANLKPDEVSLISILAA 222
Query: 532 CCHAG-LVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADV 590
G L++ E + +MK+ ++ +L+ ++D+ + + A V M K D+
Sbjct: 223 SGRLGYLLNGKEIHAYAMKNW--LDSNLRIGNTLIDMYSKCCCVAYAGLVFDKMINK-DL 279
Query: 591 VIWGTLLAA 599
+ W T++AA
Sbjct: 280 ISWTTVIAA 288
>gi|224090799|ref|XP_002309086.1| predicted protein [Populus trichocarpa]
gi|222855062|gb|EEE92609.1| predicted protein [Populus trichocarpa]
Length = 555
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 183/574 (31%), Positives = 304/574 (52%), Gaps = 74/574 (12%)
Query: 99 YIRNDRLNDAREVFDKTP--IKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEV 156
Y + +++N A V ++T + +Y ++I GF N ++ L + +MR GV+P++
Sbjct: 2 YAKCNQMNQALLVLNRTADYARNVFAYNALISGFVLNGLPQDGLGAYEEMRQAGVLPDKY 61
Query: 157 TLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEM 216
T +I + +++ + +HGLV KL +D L+MY V SSLV +
Sbjct: 62 TFPCLIKGLCEVMEVFQVKKIHGLVRKLGLD---------LDMY-VGSSLVSS------- 104
Query: 217 KERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYR 276
+ K+ L++ ARELF+ IP +DVV W +M++GY Q+ R EAL + R
Sbjct: 105 --------------YLKSELMKEARELFDEIPDRDVVLWNSMVNGYAQIGRFDEALGVCR 150
Query: 277 AMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACG 336
M +G+ + + ++S F G +H ++K GFD +C
Sbjct: 151 EMSQEGVLMSKFTVSGVLSVFAGRGDFDNGRLVHGFMIKMGFD--------------SC- 195
Query: 337 RINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQ 396
++ NALI + + + DA ++F M ++D++SW++++S
Sbjct: 196 ----------------VSVCNALIDMYGKCRCVVDALEIFETMNEKDIFSWNSILSANEL 239
Query: 397 NEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLND-- 454
+ L LF M+ GV+ + +T+ ++ A + L GR H Y++ N +
Sbjct: 240 CSDHDGTLRLFDRMLGDGVQLDLVTITTILPACSHLAALVHGREIHGYMIVNGFVKDGES 299
Query: 455 ----NLSA--AIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLK 508
NL A++DMYAKCGS+ A VFY++ +R T+ WN +I G MHG N L
Sbjct: 300 ENMYNLQTINALMDMYAKCGSMRDAGMVFYNMSNRDTA--SWNIMIMGYGMHGYGNEALY 357
Query: 509 IYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLL 568
++SD+ K +K N ITF+GVL C HAG + G ++ M+ + V P ++HY C++D+L
Sbjct: 358 MFSDMCKSGLKPNEITFVGVLLACSHAGFISQGIKFLGEMELKHGVVPTIQHYTCVIDML 417
Query: 569 GRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRV 628
GRAGQLE+A ++ +MP++ + V+W LLAA +++GNV++ E AA+ + L P+H + V
Sbjct: 418 GRAGQLEEAYKLAVTMPIQTNPVVWRALLAACQLYGNVDLAEVAAQKVFELNPAHCGNYV 477
Query: 629 LLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
L+SN Y AGR+++ IR MR +K+ PG S
Sbjct: 478 LMSNAYVAAGRYQEVLDIRHTMRQQDVKKTPGCS 511
Score = 165 bits (418), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 127/471 (26%), Positives = 216/471 (45%), Gaps = 87/471 (18%)
Query: 37 IAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMI 96
+ V Q ++IH L+ K GL+ + ++ +SL+
Sbjct: 74 MEVFQVKKIHGLVRKLGLDLDMYVGSSLV------------------------------- 102
Query: 97 SGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEV 156
S Y++++ + +ARE+FD+ P + V + SM+ G+AQ + EAL V R+M GV+ ++
Sbjct: 103 SSYLKSELMKEARELFDEIPDRDVVLWNSMVNGYAQIGRFDEALGVCREMSQEGVLMSKF 162
Query: 157 TLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEM 216
T++ V+S G R++HG +IK+ D V + L++MY C +V+A +F+ M
Sbjct: 163 TVSGVLSVFAGRGDFDNGRLVHGFMIKMGFDSCVSVCNALIDMYGKCRCVVDALEIFETM 222
Query: 217 KERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYR 276
E++I SWN +L+ A EL DG L+ ++
Sbjct: 223 NEKDIFSWNSILS----------ANELCSD------------HDGTLR---------LFD 251
Query: 277 AMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACG 336
ML DG+ + V I ++ AC A G +IH ++ G F
Sbjct: 252 RMLGDGVQLDLVTITTILPACSHLAALVHGREIHGYMIVNG-------------FVKDGE 298
Query: 337 RINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQ 396
N+ LQ + NAL+ + + G + DA +F NM RD SW+ MI GY
Sbjct: 299 SENMYNLQ----------TINALMDMYAKCGSMRDAGMVFYNMSNRDTASWNIMIMGYGM 348
Query: 397 NEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG-RWAHEYVLNNSITLNDN 455
+ N AL +F M +G+KPNEIT V V A + +G + +G ++ E L + +
Sbjct: 349 HGYGNEALYMFSDMCKSGLKPNEITFVGVLLACSHAGFISQGIKFLGEMELKHGVVPTIQ 408
Query: 456 LSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLT 506
+IDM + G + A+++ + +T V W A++ ++G+ +L
Sbjct: 409 HYTCVIDMLGRAGQLEEAYKLAVTMPIQTNPVV-WRALLAACQLYGNVDLA 458
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 79/197 (40%), Gaps = 44/197 (22%)
Query: 463 MYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNS 522
MYAKC +N A V D +V +NA+I G ++G L Y ++ + + +
Sbjct: 1 MYAKCNQMNQALLVLNRTADYARNVFAYNALISGFVLNGLPQDGLGAYEEMRQAGVLPDK 60
Query: 523 ITFIGVLSTCCHAGLVDLGERY--FKSMKSVYNVEPDLKHY--GCMVDLLGRAGQLEDAE 578
TF C GL ++ E + K V + DL Y +V ++ +++A
Sbjct: 61 YTF-----PCLIKGLCEVMEVFQVKKIHGLVRKLGLDLDMYVGSSLVSSYLKSELMKEAR 115
Query: 579 EVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAG 638
E+ +P + DVV+W +++ N YA G
Sbjct: 116 ELFDEIPDR-DVVLWNSMV----------------------------------NGYAQIG 140
Query: 639 RWEDAFSIRKEMRDCGM 655
R+++A + +EM G+
Sbjct: 141 RFDEALGVCREMSQEGV 157
>gi|357465899|ref|XP_003603234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492282|gb|AES73485.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 973
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 187/627 (29%), Positives = 309/627 (49%), Gaps = 102/627 (16%)
Query: 42 GQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIR 101
G+QIH + + G + + NS IN+Y K G ++ A+ MF +D
Sbjct: 316 GKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVD------------- 362
Query: 102 NDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASV 161
+S+ ++I G A++ +L +F D+ G++P++ T+ SV
Sbjct: 363 ------------------LISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSV 404
Query: 162 ISSSVHLGGIWEC--RMLHGLVIK--LMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMK 217
+ + L + C R +H +K +++D FV ST L+++Y
Sbjct: 405 LRACSSLEESY-CVGRQVHTCALKAGIVLDSFV--STALIDVY----------------- 444
Query: 218 ERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRA 277
+K G +E A LF D+ SW M+ G+ + EAL ++
Sbjct: 445 --------------SKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSL 490
Query: 278 MLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGR 337
M G + + + A G + +G QIH++++K F F+ + I+ Y CG
Sbjct: 491 MHERGEKADQITFANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDLFVISGILDMYLKCGE 550
Query: 338 INLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQN 397
+ + AR++FN + D +W+ +ISG +N
Sbjct: 551 M-------------------------------KSARKVFNQIPSPDDVAWTTVISGCVEN 579
Query: 398 EQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLS 457
+ AL +H M AGV+P+E T ++ A + L++G+ H ++ + + +
Sbjct: 580 GEEEQALFTYHQMRLAGVQPDEYTFATLVKACSLLTALEQGKQIHANIMKLNCAFDPFVM 639
Query: 458 AAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRN 517
+++DMYAKCG+I A+ +F R T SV+ WNA+I GLA HG+A L +++++ R
Sbjct: 640 TSLVDMYAKCGNIEDAYGLFR--RMNTRSVALWNAMIVGLAQHGNAEEALNFFNEMKSRG 697
Query: 518 IKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDA 577
+ + +TFIGVLS C H+GL + F SM+ Y VEP+++HY C+VD L RAG +++A
Sbjct: 698 VTPDRVTFIGVLSACSHSGLTSDAYKNFDSMQKTYGVEPEIEHYSCLVDALSRAGHIQEA 757
Query: 578 EEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADA 637
E+V+ SMP +A ++ TLL A R+ G+ E GER A+ L + PS + VLLSNIYA A
Sbjct: 758 EKVVSSMPFEASATMYRTLLNACRVQGDKETGERVAEKLFTMDPSDSAAYVLLSNIYAAA 817
Query: 638 GRWEDAFSIRKEMRDCGMKRLPGFSGV 664
+WE+A S R M+ +K+ PGFS +
Sbjct: 818 NQWENAVSARNMMKRVNVKKEPGFSWI 844
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 166/673 (24%), Positives = 279/673 (41%), Gaps = 138/673 (20%)
Query: 12 SQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKC 71
S+K ++ S S LR+ A + G++ H++I SGL + ++ N+LI +YAKC
Sbjct: 2 SRKCSVSPSSLLPQWFSILRHAIADSDLILGKRTHAVIVTSGLNPDRYVTNNLITMYAKC 61
Query: 72 GLISQAKSMFD--SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMG 129
G + A+ +FD S D V N +++ Y L+D +
Sbjct: 62 GSLFSARKLFDITPQSDRDLVTYNAILAAYAHTGELHDVEKT------------------ 103
Query: 130 FAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGF 189
EA +FR +R ++ TL+ + + G L G +K+ +
Sbjct: 104 -------HEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYGSPSASEALQGYAVKIGLQWD 156
Query: 190 VIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAG-------------- 235
V ++ L+N+Y + EAR LFD M R++V WNVM+ + + G
Sbjct: 157 VFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAYVEMGAGDEVLGLFSAFHR 216
Query: 236 -----------------------------LVELARELFERIPSKDVVSWGTMIDGYLQVE 266
+ A +LF DV W + YLQ
Sbjct: 217 SGLRPDCVSVRTILMGVGKKTVFERELEQVRAYATKLFVCDDDSDVTVWNKTLSSYLQAG 276
Query: 267 RLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQA 326
EA+ +R M+ + + + + ++S G QIH +V+ G+D + +
Sbjct: 277 EGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQIHGAVVRFGWDQFVSVAN 336
Query: 327 TIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYS 386
+ I+ Y G +N AR F + + SWN +I+G R+G+ E
Sbjct: 337 SAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEE---------------- 380
Query: 387 WSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKE----GRWAH 442
+L LF ++ +G+ P++ T+ SV A +S L+E GR H
Sbjct: 381 ---------------CSLRLFIDLLRSGLLPDQFTITSVLRACSS---LEESYCVGRQVH 422
Query: 443 EYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGD 502
L I L+ +S A+ID+Y+K G + A E+ +H +D ++ WNA++ G + +
Sbjct: 423 TCALKAGIVLDSFVSTALIDVYSKGGKMEEA-ELLFHNQD-GFDLASWNAMMHGFTVSDN 480
Query: 503 ANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAG-LVDLGERYFKSMKSVYNVEPDLK-H 560
L+++S + +R K + ITF AG LV L + K ++ V ++ H
Sbjct: 481 YREALRLFSLMHERGEKADQITFANAAKA---AGCLVRL-----QQGKQIHAVVIKMRFH 532
Query: 561 YGCMV-----DLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAK- 614
Y V D+ + G+++ A +V +P DV W T+ I G VE GE
Sbjct: 533 YDLFVISGILDMYLKCGEMKSARKVFNQIPSPDDVA-WTTV-----ISGCVENGEEEQAL 586
Query: 615 ------SLAGLQP 621
LAG+QP
Sbjct: 587 FTYHQMRLAGVQP 599
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 78/359 (21%), Positives = 150/359 (41%), Gaps = 96/359 (26%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
++ +A + + + QG+QIH+++ K + F+ + ++++Y KCG + A+ +F+
Sbjct: 500 QITFANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDLFVISGILDMYLKCGEMKSARKVFN 559
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+ D VA +T++I G +N +AL
Sbjct: 560 QIPSPDDVA-------------------------------WTTVISGCVENGEEEQALFT 588
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKL--MIDGFVIISTNLLNMY 200
+ MR+ GV P+E T A+++ + L + + + +H ++KL D FV+ T+L++MY
Sbjct: 589 YHQMRLAGVQPDEYTFATLVKACSLLTALEQGKQIHANIMKLNCAFDPFVM--TSLVDMY 646
Query: 201 CVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMID 260
C ++ +A LF M R++ WN M+ G A+ G E
Sbjct: 647 AKCGNIEDAYGLFRRMNTRSVALWNAMIVGLAQHGNAE---------------------- 684
Query: 261 GYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDC 320
EAL + M G+ P+ V + ++SAC HS + +
Sbjct: 685 ---------EALNFFNEMKSRGVTPDRVTFIGVLSACS-----------HSGLTSDAYKN 724
Query: 321 YDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNM 379
+D +Q T G++ I ++ L+ R G I++A ++ ++M
Sbjct: 725 FDSMQKT-------------------YGVEPEIEHYSCLVDALSRAGHIQEAEKVVSSM 764
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 70/155 (45%), Gaps = 33/155 (21%)
Query: 15 ANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLI 74
A +Q +Y A + ++ CS A+ QG+QIH+ I K + F+ SL+++YAKCG I
Sbjct: 595 AGVQPDEYTFATL--VKACSLLTALEQGKQIHANIMKLNCAFDPFVMTSLVDMYAKCGNI 652
Query: 75 SQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQND 134
A +F +T + + +MI+G AQ+
Sbjct: 653 EDAYGLFRRMNT-------------------------------RSVALWNAMIVGLAQHG 681
Query: 135 CWREALEVFRDMRILGVIPNEVTLASVISSSVHLG 169
EAL F +M+ GV P+ VT V+S+ H G
Sbjct: 682 NAEEALNFFNEMKSRGVTPDRVTFIGVLSACSHSG 716
>gi|359489007|ref|XP_002278681.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Vitis vinifera]
Length = 663
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 196/566 (34%), Positives = 298/566 (52%), Gaps = 45/566 (7%)
Query: 121 VSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEV-----------TLASVISSSVHLG 169
VS+T M+ +AQ RE LE+FR++R + V P +V TL S IS+ V
Sbjct: 119 VSWTVMVSMYAQAKRSREPLELFREIRDVRVRPTDVVTMGVDYDKYKTLKSYISNKV--- 175
Query: 170 GIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSS-----LVEARSLFDEMKERNIVSW 224
+H L S +L +M C + L+ A + + +V
Sbjct: 176 -------MHMLPT----------SQSLASMAEACLTMQALKLIHALAFRANLHHHALVLA 218
Query: 225 NVM-LNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGI 283
+ + G + A LF +I + + T+I GY + S+++ ++ M + +
Sbjct: 219 KIFRFAAVSPNGCLHYADRLFSQIHQPNTFFYNTLIRGYSKSSSPSQSVQLFNQMRRNCV 278
Query: 284 APNDVMIVDLISACGRAMAFGEGL-----QIHSIIVKAGFDCYDFIQATIIHFYAACGRI 338
P+ L+ R M L +IH ++K GF + F+ +IH YAA G
Sbjct: 279 DPDGFTFTFLLKGRSR-MRIDLPLIVASDEIHGAVLKLGFCFHLFVMNALIHLYAARGVP 337
Query: 339 NLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNE 398
A F + + SW+ L+ +R G +E ARQ+F M +RDV SW+ M+SGYAQ +
Sbjct: 338 AAAHQVFNEMVGADVVSWSGLVVAHVRAGELELARQVFYEMPERDVVSWTVMVSGYAQAK 397
Query: 399 QPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSA 458
+ ALELF M D GV+P+E+ MVSV A S G L+ G H Y+ N +L
Sbjct: 398 RSREALELFREMRDVGVRPDEVAMVSVISACTSLGDLETGFEVHRYIDENGFGWMVSLCN 457
Query: 459 AIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNI 518
A+IDMYAKCG ++ A++VF ++ + S+ WN++I A HG+A ++++ + I
Sbjct: 458 ALIDMYAKCGCMDLAWQVFNNMERK--SLITWNSMISACANHGNAEDAFRVFTLMLYSGI 515
Query: 519 KLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAE 578
+ + +TF+ +L+ H G VD G F+SM+ Y VE ++HYGCMVD+LGRAG+LE+A
Sbjct: 516 RPDGVTFLALLTAYTHKGWVDDGYGLFESMQRDYGVEAGVEHYGCMVDMLGRAGRLEEAY 575
Query: 579 EVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAG 638
++I SM M + V+WG LLAA RI+G+VE+GER K L L+P G +LL +IY AG
Sbjct: 576 KLITSMSMPCNDVVWGALLAACRIYGDVEMGERVLKKLIELKPDEGGYYILLRDIYVAAG 635
Query: 639 RWEDAFSIRKEMRDCGMKRLPGFSGV 664
R +A +R+ M G K+ G S V
Sbjct: 636 RRAEAIELRRAMDVNGAKKTLGCSWV 661
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 149/297 (50%), Gaps = 11/297 (3%)
Query: 44 QIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRND 103
+IH + K G + F+ N+LI+LYA G+ + A +F+ D V+ + ++ ++R
Sbjct: 307 EIHGAVLKLGFCFHLFVMNALIHLYAARGVPAAAHQVFNEMVGADVVSWSGLVVAHVRAG 366
Query: 104 RLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVIS 163
L AR+VF + P + VS+T M+ G+AQ REALE+FR+MR +GV P+EV + SVIS
Sbjct: 367 ELELARQVFYEMPERDVVSWTVMVSGYAQAKRSREALELFREMRDVGVRPDEVAMVSVIS 426
Query: 164 SSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVS 223
+ LG + +H + + V + L++MY C + A +F+ M+ +++++
Sbjct: 427 ACTSLGDLETGFEVHRYIDENGFGWMVSLCNALIDMYAKCGCMDLAWQVFNNMERKSLIT 486
Query: 224 WNVMLNGFAKAGLVELARELFERIP----SKDVVSWGTMIDGYLQVERLSEALTMYRAML 279
WN M++ A G E A +F + D V++ ++ Y + + ++ +M
Sbjct: 487 WNSMISACANHGNAEDAFRVFTLMLYSGIRPDGVTFLALLTAYTHKGWVDDGYGLFESMQ 546
Query: 280 CD-GIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAAC 335
D G+ ++ GRA G + + +I C D + ++ AAC
Sbjct: 547 RDYGVEAGVEHYGCMVDMLGRA---GRLEEAYKLITSMSMPCNDVVWGALL---AAC 597
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 104/467 (22%), Positives = 203/467 (43%), Gaps = 53/467 (11%)
Query: 216 MKERNIVSWNVMLNGFAKAGLVELARELFE-----RIPSKDVVSWGTMIDGYLQVERLSE 270
MK VSW VM++ +A+A ELF R+ DVV+ G D Y ++
Sbjct: 113 MKYLGDVSWTVMVSMYAQAKRSREPLELFREIRDVRVRPTDVVTMGVDYDKYKTLKSYIS 172
Query: 271 ALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIH 330
M+ + P + + AC A IH++ +A + + A I
Sbjct: 173 NKVMH-------MLPTSQSLASMAEACLTMQALK---LIHALAFRANLHHHALVLAKIFR 222
Query: 331 FYAAC--GRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKR----DV 384
F A G ++ A F + + +N LI G+ ++ + QLFN M++ D
Sbjct: 223 FAAVSPNGCLHYADRLFSQIHQPNTFFYNTLIRGYSKSSSPSQSVQLFNQMRRNCVDPDG 282
Query: 385 YSWSAMISGYAQN--EQPNM-ALELFHGMV-DAGVKPNEITMVSVFCAIASSGTLKEGRW 440
++++ ++ G ++ + P + A + HG V G + M ++ A+ G
Sbjct: 283 FTFTFLLKGRSRMRIDLPLIVASDEIHGAVLKLGFCFHLFVMNALIHLYAARGVPAA--- 339
Query: 441 AHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMH 500
AH+ V N + + + ++ + + G + A +VFY + +R V W ++ G A
Sbjct: 340 AHQ-VFNEMVGADVVSWSGLVVAHVRAGELELARQVFYEMPER--DVVSWTVMVSGYAQA 396
Query: 501 GDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLG---ERY-----FKSMKSVY 552
+ L+++ ++ ++ + + + V+S C G ++ G RY F M S+
Sbjct: 397 KRSREALELFREMRDVGVRPDEVAMVSVISACTSLGDLETGFEVHRYIDENGFGWMVSLC 456
Query: 553 NVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERA 612
N ++D+ + G ++ A +V +M K+ ++ W ++++A HGN E R
Sbjct: 457 N---------ALIDMYAKCGCMDLAWQVFNNMERKS-LITWNSMISACANHGNAEDAFRV 506
Query: 613 AKSL--AGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEM-RDCGMK 656
+ +G++P G + + L Y G +D + + + M RD G++
Sbjct: 507 FTLMLYSGIRPD-GVTFLALLTAYTHKGWVDDGYGLFESMQRDYGVE 552
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 111/268 (41%), Gaps = 42/268 (15%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E+A+VS + C++ + G ++H I ++G + N+LI++YAKCG
Sbjct: 418 EVAMVSVISACTSLGDLETGFEVHRYIDENGFGWMVSLCNALIDMYAKCG---------- 467
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
C L A +VF+ K +++ SMI A + +A V
Sbjct: 468 -CMDL--------------------AWQVFNNMERKSLITWNSMISACANHGNAEDAFRV 506
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTN----LLN 198
F M G+ P+ VT +++++ H G + + +GL + D V +++
Sbjct: 507 FTLMLYSGIRPDGVTFLALLTAYTHKGWVDDG---YGLFESMQRDYGVEAGVEHYGCMVD 563
Query: 199 MYCVCSSLVEARSLFDEMKER-NIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGT 257
M L EA L M N V W +L G VE+ + +++ G
Sbjct: 564 MLGRAGRLEEAYKLITSMSMPCNDVVWGALLAACRIYGDVEMGERVLKKLIELKPDEGGY 623
Query: 258 MI---DGYLQVERLSEALTMYRAMLCDG 282
I D Y+ R +EA+ + RAM +G
Sbjct: 624 YILLRDIYVAAGRRAEAIELRRAMDVNG 651
>gi|225462250|ref|XP_002263297.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
gi|297736133|emb|CBI24171.3| unnamed protein product [Vitis vinifera]
Length = 687
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 186/585 (31%), Positives = 288/585 (49%), Gaps = 42/585 (7%)
Query: 85 STLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFR 144
++L P I Y + L AR +FDK P ++T +I ++ EA++ +
Sbjct: 7 TSLPPHLALKFIKVYSNSGDLQRARHLFDKIPQPDLPTWTILISALTKHGRSLEAIQYYN 66
Query: 145 DMRILGVI-PNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMY--C 201
D R + P+++ L SV + L + + +H I+ V++ L++MY C
Sbjct: 67 DFRHKNCVEPDKLLLLSVAKACASLRDVMNAKRVHEDAIRFGFCSDVLLGNALIDMYGKC 126
Query: 202 VCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDG 261
CS E AR +FE +P +DV+SW +M
Sbjct: 127 RCS---------------------------------EGARLVFEGMPFRDVISWTSMASC 153
Query: 262 YLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCY 321
Y+ L EAL +R M +G PN V + ++ AC G ++H +V+ G
Sbjct: 154 YVNCGLLREALGAFRKMGLNGERPNSVTVSSILPACTDLKDLKSGREVHGFVVRNGMGGN 213
Query: 322 DFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQK 381
F+ + +++ YA+C I A+L F+ + SWN LI + N E +F M
Sbjct: 214 VFVSSALVNMYASCLSIRQAQLVFDSMSRRDTVSWNVLITAYFLNKECEKGLSVFGRMMS 273
Query: 382 RDV----YSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKE 437
V SW+A+I G QN + ALE+ M ++G KPN+IT+ SV A + +L+
Sbjct: 274 EGVGLNYASWNAVIGGCMQNGRTEKALEVLSRMQNSGFKPNQITITSVLPACTNLESLRG 333
Query: 438 GRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGL 497
G+ H Y+ + + + A++ MYAKCG + + VF + R T WN +I
Sbjct: 334 GKQIHGYIFRHWFFQDLTTTTALVFMYAKCGDLELSRRVFSMMTKRDTV--SWNTMIIAT 391
Query: 498 AMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPD 557
+MHG+ L ++ ++ ++ NS+TF GVLS C H+ LVD G F SM ++VEPD
Sbjct: 392 SMHGNGEEALLLFREMVDSGVRPNSVTFTGVLSGCSHSRLVDEGLLIFDSMSRDHSVEPD 451
Query: 558 LKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLA 617
H+ CMVD+L RAG+LE+A E I+ MP++ WG LL R++ NVE+G AA L
Sbjct: 452 ADHHSCMVDVLSRAGRLEEAYEFIKKMPIEPTAGAWGALLGGCRVYKNVELGRIAANRLF 511
Query: 618 GLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
++ + + VLLSNI A W +A RK MRD G+ + PG S
Sbjct: 512 EIESDNPGNYVLLSNILVSAKLWSEASETRKLMRDRGVTKNPGCS 556
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 128/488 (26%), Positives = 216/488 (44%), Gaps = 68/488 (13%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
+L L+S + C++ V +++H + G S+ + N+LI++Y KC
Sbjct: 78 KLLLLSVAKACASLRDVMNAKRVHEDAIRFGFCSDVLLGNALIDMYGKC----------- 126
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
CS AR VF+ P + +S+TSM + REAL
Sbjct: 127 RCS--------------------EGARLVFEGMPFRDVISWTSMASCYVNCGLLREALGA 166
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
FR M + G PN VT++S++ + L + R +HG V++ + G V +S+ L+NMY
Sbjct: 167 FRKMGLNGERPNSVTVSSILPACTDLKDLKSGREVHGFVVRNGMGGNVFVSSALVNMYAS 226
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDV----VSWGTM 258
C S+ +A+ +FD M R+ VSWNV++ + E +F R+ S+ V SW +
Sbjct: 227 CLSIRQAQLVFDSMSRRDTVSWNVLITAYFLNKECEKGLSVFGRMMSEGVGLNYASWNAV 286
Query: 259 IDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGF 318
I G +Q R +AL + M G PN + I ++ AC + G QIH I + F
Sbjct: 287 IGGCMQNGRTEKALEVLSRMQNSGFKPNQITITSVLPACTNLESLRGGKQIHGYIFRHWF 346
Query: 319 DCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNN 378
++ YA CG + L+R F + K SWN +I +G E+
Sbjct: 347 FQDLTTTTALVFMYAKCGDLELSRRVFSMMTKRDTVSWNTMIIATSMHGNGEE------- 399
Query: 379 MQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG 438
AL LF MVD+GV+PN +T V + S + EG
Sbjct: 400 ------------------------ALLLFREMVDSGVRPNSVTFTGVLSGCSHSRLVDEG 435
Query: 439 RWAHEYV-LNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGL 497
+ + ++S+ + + + ++D+ ++ G + A+E + T+ W A++ G
Sbjct: 436 LLIFDSMSRDHSVEPDADHHSCMVDVLSRAGRLEEAYEFIKKMPIEPTA-GAWGALLGGC 494
Query: 498 AMHGDANL 505
++ + L
Sbjct: 495 RVYKNVEL 502
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 105/264 (39%), Gaps = 78/264 (29%)
Query: 15 ANLQNSDY---ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKC 71
+ +QNS + ++ + S L C+ ++ G+QIH IF+ + +L+ +YAKC
Sbjct: 304 SRMQNSGFKPNQITITSVLPACTNLESLRGGKQIHGYIFRHWFFQDLTTTTALVFMYAKC 363
Query: 72 GLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFA 131
G + ++ +F + D VS+ +MI+ +
Sbjct: 364 GDLELSRRVFSMMTKRDT-------------------------------VSWNTMIIATS 392
Query: 132 QNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVI 191
+ EAL +FR+M GV PN VT V+S H +L+ +G +I
Sbjct: 393 MHGNGEEALLLFREMVDSGVRPNSVTFTGVLSGCSH--------------SRLVDEGLLI 438
Query: 192 ISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNV-----MLNGFAKAGLVELARELFER 246
FD M + V + M++ ++AG +E A E ++
Sbjct: 439 ---------------------FDSMSRDHSVEPDADHHSCMVDVLSRAGRLEEAYEFIKK 477
Query: 247 IPSKDVV-SWGTMIDG---YLQVE 266
+P + +WG ++ G Y VE
Sbjct: 478 MPIEPTAGAWGALLGGCRVYKNVE 501
>gi|296082284|emb|CBI21289.3| unnamed protein product [Vitis vinifera]
Length = 581
Score = 303 bits (775), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 159/424 (37%), Positives = 251/424 (59%), Gaps = 4/424 (0%)
Query: 243 LFERIPSK-DVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAM 301
LF + K +V SW ++I + EAL + +M + PN I +C +
Sbjct: 31 LFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALL 90
Query: 302 AFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIA 361
G Q H + GF+ F+ + ++ Y+ CG + AR F+ +I SW ++I
Sbjct: 91 DLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMIT 150
Query: 362 GFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMV-DAGVKPNEI 420
G+++N A ++F+ M +RDV SW+++I+ YAQN ++E+FH MV D + N +
Sbjct: 151 GYVQNDDAHRALRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAV 210
Query: 421 TMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHI 480
T+ +V A A SG+ + G+ H+ V+ + N + +IIDMY KCG + A + F +
Sbjct: 211 TLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRM 270
Query: 481 RDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDL 540
R++ +V W+A++ G MHG A L+++ ++ +K N ITF+ VL+ C HAGL++
Sbjct: 271 REK--NVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEE 328
Query: 541 GERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAAS 600
G +FK+M ++VEP ++HYGCMVDLLGRAG L++A ++I+ M ++ D V+WG LL A
Sbjct: 329 GWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGAC 388
Query: 601 RIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPG 660
R+H NV++GE +A+ L L P + VLLSNIYADAGRWED +R M++ G+ + PG
Sbjct: 389 RMHKNVDLGEISARKLFELDPKNCGYYVLLSNIYADAGRWEDVERMRILMKNSGLVKPPG 448
Query: 661 FSGV 664
FS V
Sbjct: 449 FSLV 452
Score = 168 bits (426), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 117/399 (29%), Positives = 195/399 (48%), Gaps = 45/399 (11%)
Query: 113 DKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIW 172
DKT + S+ S+I A++ EAL F MR L + PN T I S L +
Sbjct: 37 DKTNV---FSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLH 93
Query: 173 ECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFA 232
R H + + + +S+ L++MY C L +AR+LFDE+ RNIVSW M+ G+
Sbjct: 94 SGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYV 153
Query: 233 KAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDG-IAPNDVMIV 291
+ A +F+ + +DV+SW ++I Y Q +E++ ++ M+ DG I N V +
Sbjct: 154 QNDDAHRALRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLS 213
Query: 292 DLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKD 351
++ AC + + G IH ++K G + F+ +II Y CG++ +AR F+ +
Sbjct: 214 AVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREK 273
Query: 352 HIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMV 411
++ SW+A++AG+ GM A++ ALE+F+ M
Sbjct: 274 NVKSWSAMVAGY---GMHGHAKE----------------------------ALEVFYEMN 302
Query: 412 DAGVKPNEITMVSVFCAIASSGTLKEG-RW----AHEYVLNNSITLNDNLSAAIIDMYAK 466
AGVKPN IT VSV A + +G L+EG W +HE+ + + ++D+ +
Sbjct: 303 MAGVKPNYITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGV----EHYGCMVDLLGR 358
Query: 467 CGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANL 505
G + AF++ ++ R V W A++ MH + +L
Sbjct: 359 AGYLKEAFDLIKGMKLRPDFVV-WGALLGACRMHKNVDL 396
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 96/365 (26%), Positives = 170/365 (46%), Gaps = 63/365 (17%)
Query: 29 ALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLD 88
A++ CSA + + G+Q H G E + F+ ++L+++Y+KCG + A+++FD S +
Sbjct: 82 AIKSCSALLDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRN 141
Query: 89 PVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRI 148
V+ MI+GY++ND + A VFD + +S+ S+I +AQN E++E+F M
Sbjct: 142 IVSWTSMITGYVQNDDAHRALRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVK 201
Query: 149 LGVIP-NEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLV 207
G I N VTL++V+ + H G + +H VIK+ ++ V + T++++MYC C +
Sbjct: 202 DGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVE 261
Query: 208 EARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVER 267
AR FD M+E+N+ SW+ M+ G+ G
Sbjct: 262 MARKAFDRMREKNVKSWSAMVAGYGMHG-------------------------------H 290
Query: 268 LSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQAT 327
EAL ++ M G+ PN + V +++AC A EG
Sbjct: 291 AKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGW-------------------- 330
Query: 328 IIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKR-DVYS 386
H++ A + E ++ + + ++ R G +++A L M+ R D
Sbjct: 331 --HWFKA--------MSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVV 380
Query: 387 WSAMI 391
W A++
Sbjct: 381 WGALL 385
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 128/302 (42%), Gaps = 51/302 (16%)
Query: 21 DYELALVSALRYCSAHIAVSQ-GQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKS 79
+Y +SA+ AH + G+ IH + K GLESN F+ S+I++Y KCG + A+
Sbjct: 206 NYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARK 265
Query: 80 MFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREA 139
FD + + + M++GY + G A +EA
Sbjct: 266 AFDRMREKNVKSWSAMVAGY--------------------------GMHGHA-----KEA 294
Query: 140 LEVFRDMRILGVIPNEVTLASVISSSVHLGGI-----WECRMLHGLVIKLMIDGFVIIST 194
LEVF +M + GV PN +T SV+++ H G + W M H ++ ++ +
Sbjct: 295 LEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHY----G 350
Query: 195 NLLNMYCVCSSLVEARSLFDEMKER-NIVSWNVMLNGFAKAGLVEL----ARELFERIPS 249
++++ L EA L MK R + V W +L V+L AR+LFE P
Sbjct: 351 CMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGACRMHKNVDLGEISARKLFELDP- 409
Query: 250 KDVVSWGTMIDGYLQVERLSEALTMYRAMLCDG-IAPNDVMIVDLISACGRAMAFGEGLQ 308
K+ + + + Y R + M M G + P +VD+ GR F G +
Sbjct: 410 KNCGYYVLLSNIYADAGRWEDVERMRILMKNSGLVKPPGFSLVDIK---GRVHVFLVGDR 466
Query: 309 IH 310
H
Sbjct: 467 EH 468
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 134/322 (41%), Gaps = 75/322 (23%)
Query: 339 NLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNE 398
NL L + K ++ SWN++IA R+G +A + F++M+K
Sbjct: 27 NLTTLFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRK----------------- 69
Query: 399 QPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGT---LKEGRWAHEYVLNNSITLNDN 455
+KPN T CAI S L GR AH+ L +
Sbjct: 70 --------------LSLKPNRSTFP---CAIKSCSALLDLHSGRQAHQQALIFGFEPDLF 112
Query: 456 LSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEK 515
+S+A++DMY+KCG + A +F I R ++ W ++I G + DA+ L+++ + +
Sbjct: 113 VSSALVDMYSKCGELRDARTLFDEISHR--NIVSWTSMITGYVQNDDAHRALRVFDGMAE 170
Query: 516 RN--------------------------------IKLNSITFIGVLSTCCHAGLVDLGER 543
R+ I N++T VL C H+G LG+
Sbjct: 171 RDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKC 230
Query: 544 YFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIH 603
+ + +E ++ ++D+ + G++E A + M K +V W ++A +H
Sbjct: 231 IHDQVIKM-GLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREK-NVKSWSAMVAGYGMH 288
Query: 604 GNVEVGERA--AKSLAGLQPSH 623
G+ + ++AG++P++
Sbjct: 289 GHAKEALEVFYEMNMAGVKPNY 310
>gi|356530245|ref|XP_003533693.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like [Glycine max]
Length = 581
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 173/577 (29%), Positives = 304/577 (52%), Gaps = 53/577 (9%)
Query: 92 CNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGV 151
CN+ IS R ++ AR+VF++ P + +T+MI G+ + REA ++F
Sbjct: 4 CNLFISRLCREGEIDYARKVFEEMPERDIGLWTTMITGYLKCGMIREARKLFDR------ 57
Query: 152 IPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARS 211
W+ + V+ T ++N Y + + EA
Sbjct: 58 --------------------WDAKK------------NVVTWTAMVNGYIKFNQVKEAER 85
Query: 212 LFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEA 271
LF EM RN+VSWN M++G+A+ GL + A +LF R+P ++VVSW T+I +Q R+ +A
Sbjct: 86 LFYEMPLRNVVSWNTMVDGYARNGLTQQALDLFRRMPERNVVSWNTIITALVQCGRIEDA 145
Query: 272 LTMYRAMLCDGIAPNDVMIVDLISACGR---AMAFGEGLQIHSIIVKAGFDCYDFIQATI 328
++ M + M+ L + GR A A + + + +++ +
Sbjct: 146 QRLFDQMKDRDVVSWTTMVAGL-AKNGRVEDARALFDQMPVRNVVS----------WNAM 194
Query: 329 IHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWS 388
I YA R++ A F+ + + SWN +I GFI+NG + A +LF MQ+++V +W+
Sbjct: 195 ITGYAQNRRLDEALQLFQRMPERDMPSWNTMITGFIQNGELNRAEKLFGEMQEKNVITWT 254
Query: 389 AMISGYAQNEQPNMALELFHGMVDAG-VKPNEITMVSVFCAIASSGTLKEGRWAHEYVLN 447
AM++GY Q+ AL +F M+ +KPN T V+V A + L EG+ H+ +
Sbjct: 255 AMMTGYVQHGLSEEALRVFIKMLATNELKPNTGTFVTVLGACSDLAGLTEGQQIHQMISK 314
Query: 448 NSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTL 507
+ + +A+I+MY+KCG ++TA ++F + WN +I A HG +
Sbjct: 315 TVFQDSTCVVSALINMYSKCGELHTARKMFDDGLLSQRDLISWNGMIAAYAHHGYGKEAI 374
Query: 508 KIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDL 567
+++++++ + N +TF+G+L+ C H GLV+ G +YF + +++ HY C+VDL
Sbjct: 375 NLFNEMQELGVCANDVTFVGLLTACSHTGLVEEGFKYFDEILKNRSIQLREDHYACLVDL 434
Query: 568 LGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSR 627
GRAG+L++A +I + + + +WG LLA +HGN ++G+ A+ + ++P + +
Sbjct: 435 CGRAGRLKEASNIIEGLGEEVPLTVWGALLAGCNVHGNADIGKLVAEKILKIEPQNAGTY 494
Query: 628 VLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
LLSN+YA G+W++A ++R M+D G+K+ PG S +
Sbjct: 495 SLLSNMYASVGKWKEAANVRMRMKDMGLKKQPGCSWI 531
Score = 198 bits (504), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 133/493 (26%), Positives = 245/493 (49%), Gaps = 76/493 (15%)
Query: 49 IFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSC-STLDPVACNIMISGYIRNDRLND 107
+F+ E + + ++I Y KCG+I +A+ +FD + + V M++GYI+ +++ +
Sbjct: 23 VFEEMPERDIGLWTTMITGYLKCGMIREARKLFDRWDAKKNVVTWTAMVNGYIKFNQVKE 82
Query: 108 AREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVH 167
A +F + P++ VS+ +M+ G+A+N ++AL++FR M V V+ ++I++ V
Sbjct: 83 AERLFYEMPLRNVVSWNTMVDGYARNGLTQQALDLFRRMPERNV----VSWNTIITALVQ 138
Query: 168 LGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVM 227
G I + + L M D V+ T ++ + +AR+LFD+M RN+VSWN M
Sbjct: 139 CGRIEDAQRL----FDQMKDRDVVSWTTMVAGLAKNGRVEDARALFDQMPVRNVVSWNAM 194
Query: 228 LNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQ------VERL------------- 268
+ G+A+ ++ A +LF+R+P +D+ SW TMI G++Q E+L
Sbjct: 195 ITGYAQNRRLDEALQLFQRMPERDMPSWNTMITGFIQNGELNRAEKLFGEMQEKNVITWT 254
Query: 269 ------------SEALTMYRAMLC-DGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVK 315
EAL ++ ML + + PN V ++ AC EG QIH +I K
Sbjct: 255 AMMTGYVQHGLSEEALRVFIKMLATNELKPNTGTFVTVLGACSDLAGLTEGQQIHQMISK 314
Query: 316 AGFDCYDFIQATIIHFYAACGRINLARLQFELGI--KDHIASWNALIAGFIRNGMIEDAR 373
F + + +I+ Y+ CG ++ AR F+ G+ + + SWN +IA + +G ++A
Sbjct: 315 TVFQDSTCVVSALINMYSKCGELHTARKMFDDGLLSQRDLISWNGMIAAYAHHGYGKEAI 374
Query: 374 QLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSG 433
LFN MQ + GV N++T V + A + +G
Sbjct: 375 NLFNEMQ-------------------------------ELGVCANDVTFVGLLTACSHTG 403
Query: 434 TLKEG-RWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNA 492
++EG ++ E + N SI L ++ A ++D+ + G + A + + + ++ W A
Sbjct: 404 LVEEGFKYFDEILKNRSIQLREDHYACLVDLCGRAGRLKEASNIIEGLGEE-VPLTVWGA 462
Query: 493 IICGLAMHGDANL 505
++ G +HG+A++
Sbjct: 463 LLAGCNVHGNADI 475
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 117/256 (45%), Gaps = 42/256 (16%)
Query: 25 ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSC 84
V+ L CS +++GQQIH +I K+ + +T + ++LIN+Y+KCG + A+ MFD
Sbjct: 288 TFVTVLGACSDLAGLTEGQQIHQMISKTVFQDSTCVVSALINMYSKCGELHTARKMFD-- 345
Query: 85 STLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFR 144
D L R++ +S+ MI +A + +EA+ +F
Sbjct: 346 ------------------DGLLSQRDL---------ISWNGMIAAYAHHGYGKEAINLFN 378
Query: 145 DMRILGVIPNEVTLASVISSSVHLGGIWEC-----RMLHGLVIKLMIDGFVIISTNLLNM 199
+M+ LGV N+VT ++++ H G + E +L I+L D + L+++
Sbjct: 379 EMQELGVCANDVTFVGLLTACSHTGLVEEGFKYFDEILKNRSIQLREDHYAC----LVDL 434
Query: 200 YCVCSSLVEARSLFDEMKER-NIVSWNVMLNG---FAKAGLVELARELFERIPSKDVVSW 255
L EA ++ + + E + W +L G A + +L E +I ++ ++
Sbjct: 435 CGRAGRLKEASNIIEGLGEEVPLTVWGALLAGCNVHGNADIGKLVAEKILKIEPQNAGTY 494
Query: 256 GTMIDGYLQVERLSEA 271
+ + Y V + EA
Sbjct: 495 SLLSNMYASVGKWKEA 510
>gi|347954500|gb|AEP33750.1| chloroplast biogenesis 19, partial [Lepidium sativum]
Length = 494
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 155/420 (36%), Positives = 250/420 (59%), Gaps = 6/420 (1%)
Query: 249 SKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQ 308
S+ +VSW + I + +RL+EA + M GI PN + + L+SACG + E L
Sbjct: 30 SETIVSWTSRITLLSRDDRLAEAAREFSDMRLAGIEPNHITFISLLSACGNFPSGSEALS 89
Query: 309 --IHSIIVKAGFD-CYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIR 365
+H K G D + + I+ Y+ G + ARL F+ + +WN +I G++R
Sbjct: 90 DLLHGYACKLGLDRSHVMVGTAILGMYSKRGHVRKARLVFDYMEDKNSVTWNTMIDGYMR 149
Query: 366 NGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSV 425
NG +++A ++F+ M +RD+ SW+AMI+G+ + AL F M +GV P+ + +++
Sbjct: 150 NGQVDNAVKVFDEMPERDLISWTAMITGFVKKGFHEEALAWFREMQISGVNPDYVAIIAA 209
Query: 426 FCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTT 485
A + G L G WAH YV++ N +S ++ID+Y +CG + A +VF + RT
Sbjct: 210 LAACTNLGALSFGLWAHRYVVSQDFRNNVRVSNSLIDLYCRCGCVEFARQVFDTMEKRT- 268
Query: 486 SVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYF 545
V WN++I G A +G+AN +L + +++ K +++TF G L+ C H GLV+ G +YF
Sbjct: 269 -VVSWNSVIVGFAANGNANESLVYFRKMQEEGFKPDAVTFTGALTACSHVGLVEEGFQYF 327
Query: 546 KSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGN 605
+ MK+ Y + P ++H+GC+VDL RAG+LEDA +V+ SMPMK + V+ G+LLAA R HGN
Sbjct: 328 QMMKTDYRISPRIEHFGCLVDLYSRAGRLEDAIKVVESMPMKPNEVVIGSLLAACRNHGN 387
Query: 606 VEV-GERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
+ ER K ++ L + V+LSN+YA G+WE A +R++M+ G+K+ PG+S +
Sbjct: 388 HTILAERLMKHISDLDVKGHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGYSSI 447
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 105/380 (27%), Positives = 183/380 (48%), Gaps = 35/380 (9%)
Query: 101 RNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLAS 160
R + +N + +++ + VS+TS I +++D EA F DMR+ G+ PN +T S
Sbjct: 14 RKNNVNPKIQKLNQSTSETIVSWTSRITLLSRDDRLAEAAREFSDMRLAGIEPNHITFIS 73
Query: 161 VISSSVHLGGIWEC--RMLHGLVIKLMID-GFVIISTNLLNMYCVCSSLVEARSLFDEMK 217
++S+ + E +LHG KL +D V++ T +L MY + +AR +FD M+
Sbjct: 74 LLSACGNFPSGSEALSDLLHGYACKLGLDRSHVMVGTAILGMYSKRGHVRKARLVFDYME 133
Query: 218 ERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRA 277
++N V+WN M++G+ + G V+ A ++F+ +P +D++SW MI G+++ EAL +R
Sbjct: 134 DKNSVTWNTMIDGYMRNGQVDNAVKVFDEMPERDLISWTAMITGFVKKGFHEEALAWFRE 193
Query: 278 MLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGR 337
M G+ P+ V I+ ++AC A GL H +V F + ++I Y CG
Sbjct: 194 MQISGVNPDYVAIIAALAACTNLGALSFGLWAHRYVVSQDFRNNVRVSNSLIDLYCRCGC 253
Query: 338 INLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQN 397
+ AR F+ K + SWN++I GF NG
Sbjct: 254 VEFARQVFDTMEKRTVVSWNSVIVGFAANG------------------------------ 283
Query: 398 EQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG-RWAHEYVLNNSITLNDNL 456
N +L F M + G KP+ +T A + G ++EG ++ + I+
Sbjct: 284 -NANESLVYFRKMQEEGFKPDAVTFTGALTACSHVGLVEEGFQYFQMMKTDYRISPRIEH 342
Query: 457 SAAIIDMYAKCGSINTAFEV 476
++D+Y++ G + A +V
Sbjct: 343 FGCLVDLYSRAGRLEDAIKV 362
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 90/314 (28%), Positives = 157/314 (50%), Gaps = 55/314 (17%)
Query: 45 IHSLIFKSGLE-SNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRND 103
+H K GL+ S+ + +++ +Y+K G + +A+ +FD + V N MI GY+RN
Sbjct: 92 LHGYACKLGLDRSHVMVGTAILGMYSKRGHVRKARLVFDYMEDKNSVTWNTMIDGYMRNG 151
Query: 104 RLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVIS 163
++++A +VFD+ P + +S+T+MI GF + EAL FR+M+I GV P+ V + + ++
Sbjct: 152 QVDNAVKVFDEMPERDLISWTAMITGFVKKGFHEEALAWFREMQISGVNPDYVAIIAALA 211
Query: 164 SSVHLG----GIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKER 219
+ +LG G+W H V+ V +S +L+++YC C + AR +FD M++R
Sbjct: 212 ACTNLGALSFGLWA----HRYVVSQDFRNNVRVSNSLIDLYCRCGCVEFARQVFDTMEKR 267
Query: 220 NIVSWNVMLNGFA-----------------------------------KAGLVELARELF 244
+VSWN ++ GFA GLVE + F
Sbjct: 268 TVVSWNSVIVGFAANGNANESLVYFRKMQEEGFKPDAVTFTGALTACSHVGLVEEGFQYF 327
Query: 245 ERIPSKDVVS-----WGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISAC-- 297
+ + + +S +G ++D Y + RL +A+ + +M + PN+V+I L++AC
Sbjct: 328 QMMKTDYRISPRIEHFGCLVDLYSRAGRLEDAIKVVESM---PMKPNEVVIGSLLAACRN 384
Query: 298 -GRAMAFGEGLQIH 310
G E L H
Sbjct: 385 HGNHTILAERLMKH 398
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 112/272 (41%), Gaps = 50/272 (18%)
Query: 374 QLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVF--CAIAS 431
Q N + SW++ I+ +++++ A F M AG++PN IT +S+ C
Sbjct: 23 QKLNQSTSETIVSWTSRITLLSRDDRLAEAAREFSDMRLAGIEPNHITFISLLSACGNFP 82
Query: 432 SGTLKEGRWAHEYV----LNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSV 487
SG+ H Y L+ S + + AI+ MY+K G + A VF ++ D+ +
Sbjct: 83 SGSEALSDLLHGYACKLGLDRSHVM---VGTAILGMYSKRGHVRKARLVFDYMEDKNSVT 139
Query: 488 SPWNAIICGLAMHGDANLTLKIYSDLEKRN------------------------------ 517
WN +I G +G + +K++ ++ +R+
Sbjct: 140 --WNTMIDGYMRNGQVDNAVKVFDEMPERDLISWTAMITGFVKKGFHEEALAWFREMQIS 197
Query: 518 -IKLNSITFIGVLSTCCHAGLVDLG---ERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQ 573
+ + + I L+ C + G + G RY S NV ++DL R G
Sbjct: 198 GVNPDYVAIIAALAACTNLGALSFGLWAHRYVVSQDFRNNVRVS----NSLIDLYCRCGC 253
Query: 574 LEDAEEVIRSMPMKADVVIWGTLLAASRIHGN 605
+E A +V +M K VV W +++ +GN
Sbjct: 254 VEFARQVFDTME-KRTVVSWNSVIVGFAANGN 284
>gi|242051881|ref|XP_002455086.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
gi|241927061|gb|EES00206.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
Length = 627
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 163/413 (39%), Positives = 238/413 (57%), Gaps = 7/413 (1%)
Query: 253 VSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMA-FGEGLQIHS 311
V+W +I G+ + R E+ + M G AP V V ++SACG+ G+Q+H
Sbjct: 88 VAWNALISGHNRGGRFGESCGSFVDMARAGAAPTPVTYVSVLSACGKGTRDVLLGMQVHG 147
Query: 312 IIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIED 371
+V +G ++ ++ YA C + A F+ + SW +L++G R G +++
Sbjct: 148 RVVGSGVLPDLRVENALVDMYAECADMGSAWKVFDGMQVRSVVSWTSLLSGLARLGQVDE 207
Query: 372 ARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIAS 431
AR LF+ M +RD SW+AMI GY + ALE+F M + V +E TMVSV A A
Sbjct: 208 ARDLFDRMPERDTVSWTAMIDGYVWAARFREALEMFREMQYSNVSADEFTMVSVITACAQ 267
Query: 432 SGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVF--YHIRDRTTSVSP 489
G L+ G W Y+ I ++ + A+IDMY+KCGSI A +VF H RD+ T
Sbjct: 268 LGALEMGEWVRVYMSRQGIKMDAFVGNALIDMYSKCGSIERALDVFKGMHHRDKFT---- 323
Query: 490 WNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMK 549
W AII GLA++G ++++ + + + + +TFIGVL+ C HAGLVD G +F SM
Sbjct: 324 WTAIILGLAVNGYEEEAIEMFHRMIRVSETPDEVTFIGVLTACTHAGLVDKGREFFLSMI 383
Query: 550 SVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVG 609
YN+ P++ HYGC++DLLGRAG++ +A + I MPM + IWGTLLAA R+HGN E+G
Sbjct: 384 EAYNIAPNVVHYGCIIDLLGRAGKITEALDTIDQMPMTPNSTIWGTLLAACRVHGNSEIG 443
Query: 610 ERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
E A+ L L P + +LLSNIYA RWED +R + + G+K+ PG S
Sbjct: 444 ELVAERLLELDPENSMVYILLSNIYAKCNRWEDVRRLRHAIMEKGIKKEPGCS 496
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 132/492 (26%), Positives = 221/492 (44%), Gaps = 84/492 (17%)
Query: 25 ALVSAL-RYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
AL+ A+ R + + + +H+ + + G+ N + +SL+ Y G + A+++
Sbjct: 24 ALLKAVARAAGGSGSAAPARAVHAHVVRLGMGRNAHVASSLVAAYTAGGDGAAARALVGE 83
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
C T PVA N +ISG+ R R ++ C S F
Sbjct: 84 CDT--PVAWNALISGHNRGGRFGES-----------CGS--------------------F 110
Query: 144 RDMRILGVIPNEVTLASVISS------SVHLGGIWECRMLHGLVIKLMIDGFVIISTNLL 197
DM G P VT SV+S+ V LG +HG V+ + + + L+
Sbjct: 111 VDMARAGAAPTPVTYVSVLSACGKGTRDVLLG-----MQVHGRVVGSGVLPDLRVENALV 165
Query: 198 NMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGT 257
+MY C+ + A +FD M+ R++VSW +L+G A+ G V+ AR+LF+R+P +D VSW
Sbjct: 166 DMYAECADMGSAWKVFDGMQVRSVVSWTSLLSGLARLGQVDEARDLFDRMPERDTVSWTA 225
Query: 258 MIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAG 317
MIDGY+ R EAL M+R M ++ ++ +V +I+AC + A G + + + G
Sbjct: 226 MIDGYVWAARFREALEMFREMQYSNVSADEFTMVSVITACAQLGALEMGEWVRVYMSRQG 285
Query: 318 FDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFN 377
F+ +I Y+ CG IE A +F
Sbjct: 286 IKMDAFVGNALIDMYSKCGS-------------------------------IERALDVFK 314
Query: 378 NMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKE 437
M RD ++W+A+I G A N A+E+FH M+ P+E+T + V A +G + +
Sbjct: 315 GMHHRDKFTWTAIILGLAVNGYEEEAIEMFHRMIRVSETPDEVTFIGVLTACTHAGLVDK 374
Query: 438 GRWAHEYVLN----NSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAI 493
GR E+ L+ +I N IID+ + G I A + + T + + W +
Sbjct: 375 GR---EFFLSMIEAYNIAPNVVHYGCIIDLLGRAGKITEALDTIDQM-PMTPNSTIWGTL 430
Query: 494 ICGLAMHGDANL 505
+ +HG++ +
Sbjct: 431 LAACRVHGNSEI 442
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 101/236 (42%), Gaps = 43/236 (18%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E +VS + C+ A+ G+ + + + G++ + F+ N+LI++Y+KCG I +A +F
Sbjct: 255 EFTMVSVITACAQLGALEMGEWVRVYMSRQGIKMDAFVGNALIDMYSKCGSIERALDVF- 313
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
G D+ ++T++I+G A N EA+E+
Sbjct: 314 --------------KGMHHRDKF----------------TWTAIILGLAVNGYEEEAIEM 343
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
F M + P+EVT V+++ H G + + R MI+ + I+ N+++ C+
Sbjct: 344 FHRMIRVSETPDEVTFIGVLTACTHAGLVDKGREF----FLSMIEAYN-IAPNVVHYGCI 398
Query: 203 ------CSSLVEARSLFDEMK-ERNIVSWNVMLNGFAKAGLVELARELFERIPSKD 251
+ EA D+M N W +L G E+ + ER+ D
Sbjct: 399 IDLLGRAGKITEALDTIDQMPMTPNSTIWGTLLAACRVHGNSEIGELVAERLLELD 454
>gi|225457355|ref|XP_002281803.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 553
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 171/477 (35%), Positives = 265/477 (55%), Gaps = 28/477 (5%)
Query: 214 DEMKERNIVSWNVMLNGFAKAG--LVEL------------ARELFERIPSKDVVSWGTMI 259
D +K+ + +++NGF++ LV+L A ++FERI + W MI
Sbjct: 29 DTIKKLKQIHTQIIVNGFSQKNFLLVKLLSFYITSGNLLNAHKVFERIENPSTTVWNQMI 88
Query: 260 DGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFD 319
G+ Q E + + +Y M+ PN+ LI C R+ EG Q+H +V G+
Sbjct: 89 RGHSQSETPHKLVELYNRMVEAEAEPNEFTYSFLIGGCARSRLLREGEQVHGRVVANGYC 148
Query: 320 CYDFIQATIIHFYAACGR---INLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLF 376
F++ ++++ YA G + AR F+ + +I SWN+L+AG++R G ++ AR++F
Sbjct: 149 TNVFVRTSLVNLYAIAGGYDGVRKARRVFDEIVDRNIVSWNSLLAGYVRCGDVDGARRIF 208
Query: 377 NNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLK 436
+ M +R+V SW+ MI+G AQ + AL LFH M AGVK +++ +V+ A A G LK
Sbjct: 209 DEMPERNVVSWTTMIAGCAQIGRCKQALHLFHEMRRAGVKLDQVALVAALSACAELGDLK 268
Query: 437 EGRWAHEYVLNNSITLND----NLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNA 492
G W H Y+ N +L+ ++I MYA CG I+ A++VF ++ R+T W +
Sbjct: 269 LGTWIHSYIDERLHAGNQPLLVSLNNSLIHMYASCGVIDKAYKVFIGMQQRSTI--SWTS 326
Query: 493 IICGLAMHGDANLTLKIYSDLEKRNI---KLNSITFIGVLSTCCHAGLVDLGERYFKSMK 549
+I G A G A L ++ +++ + + ITFIGVL C HAG VD G +F+ M
Sbjct: 327 MITGFAKQGHAEEALGVFQWMQRLGTDEGRPDGITFIGVLCACSHAGFVDQGRHFFECMN 386
Query: 550 SVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVG 609
+ + P ++HYGCMVDLL RAG L++A +I SMPMK + +WG LL RIH N E+
Sbjct: 387 KKWGIVPRIEHYGCMVDLLSRAGFLDEAHRLIESMPMKPNDAVWGALLGGCRIHKNAELA 446
Query: 610 ERAAKSLA-GLQPSHGPSR-VLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
A+ LA L+P VLLSN+YA A RW+D +R++M + G+++ G S V
Sbjct: 447 SHVAQKLALELKPDQAAGYLVLLSNVYATAKRWQDVALVRQKMVEIGVRKPAGRSWV 503
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 117/429 (27%), Positives = 205/429 (47%), Gaps = 41/429 (9%)
Query: 95 MISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPN 154
++S YI + L +A +VF++ + MI G +Q++ + +E++ M PN
Sbjct: 56 LLSFYITSGNLLNAHKVFERIENPSTTVWNQMIRGHSQSETPHKLVELYNRMVEAEAEPN 115
Query: 155 EVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSS---LVEARS 211
E T + +I + E +HG V+ V + T+L+N+Y + + +AR
Sbjct: 116 EFTYSFLIGGCARSRLLREGEQVHGRVVANGYCTNVFVRTSLVNLYAIAGGYDGVRKARR 175
Query: 212 LFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEA 271
+FDE+ +RNIVSWN +L G+ + G V+ AR +F+ +P ++VVSW TMI G Q+ R +A
Sbjct: 176 VFDEIVDRNIVSWNSLLAGYVRCGDVDGARRIFDEMPERNVVSWTTMIAGCAQIGRCKQA 235
Query: 272 LTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSII---VKAGFDCYDF-IQAT 327
L ++ M G+ + V +V +SAC G IHS I + AG + +
Sbjct: 236 LHLFHEMRRAGVKLDQVALVAALSACAELGDLKLGTWIHSYIDERLHAGNQPLLVSLNNS 295
Query: 328 IIHFYAACGRINLARLQFELGIKDH-IASWNALIAGFIRNGMIEDARQLFNNMQKRDVYS 386
+IH YA+CG I+ A F +G++ SW ++I GF + G E+A +F MQ+
Sbjct: 296 LIHMYASCGVIDKAYKVF-IGMQQRSTISWTSMITGFAKQGHAEEALGVFQWMQRLG--- 351
Query: 387 WSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVL 446
D G +P+ IT + V CA + +G + +GR E +
Sbjct: 352 ------------------------TDEG-RPDGITFIGVLCACSHAGFVDQGRHFFE-CM 385
Query: 447 NNSITLNDNLS--AAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDAN 504
N + + ++D+ ++ G ++ A + + + + W A++ G +H +A
Sbjct: 386 NKKWGIVPRIEHYGCMVDLLSRAGFLDEAHRLIESMPMKPND-AVWGALLGGCRIHKNAE 444
Query: 505 LTLKIYSDL 513
L + L
Sbjct: 445 LASHVAQKL 453
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 126/220 (57%), Gaps = 7/220 (3%)
Query: 33 CSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGL---ISQAKSMFDSCSTLDP 89
C+ + +G+Q+H + +G +N F++ SL+NLYA G + +A+ +FD +
Sbjct: 126 CARSRLLREGEQVHGRVVANGYCTNVFVRTSLVNLYAIAGGYDGVRKARRVFDEIVDRNI 185
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
V+ N +++GY+R ++ AR +FD+ P + VS+T+MI G AQ ++AL +F +MR
Sbjct: 186 VSWNSLLAGYVRCGDVDGARRIFDEMPERNVVSWTTMIAGCAQIGRCKQALHLFHEMRRA 245
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDG----FVIISTNLLNMYCVCSS 205
GV ++V L + +S+ LG + +H + + + G V ++ +L++MY C
Sbjct: 246 GVKLDQVALVAALSACAELGDLKLGTWIHSYIDERLHAGNQPLLVSLNNSLIHMYASCGV 305
Query: 206 LVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFE 245
+ +A +F M++R+ +SW M+ GFAK G E A +F+
Sbjct: 306 IDKAYKVFIGMQQRSTISWTSMITGFAKQGHAEEALGVFQ 345
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 100/253 (39%), Gaps = 81/253 (32%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESN----TFIQNSLINLYAKCGLISQAK 78
++ALV+AL C+ + G IHS I + N + NSLI++YA CG+I
Sbjct: 251 QVALVAALSACAELGDLKLGTWIHSYIDERLHAGNQPLLVSLNNSLIHMYASCGVI---- 306
Query: 79 SMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWRE 138
+ A +VF + +S+TSMI GFA+ E
Sbjct: 307 ---------------------------DKAYKVFIGMQQRSTISWTSMITGFAKQGHAEE 339
Query: 139 ALEVFRDMRILGV---IPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTN 195
AL VF+ M+ LG P+ +T V+ + H G +D
Sbjct: 340 ALGVFQWMQRLGTDEGRPDGITFIGVLCACSHAG---------------FVD-------- 376
Query: 196 LLNMYCVCSSLVEARSLFDEMKER-----NIVSWNVMLNGFAKAGLVELARELFERIPSK 250
+ R F+ M ++ I + M++ ++AG ++ A L E +P K
Sbjct: 377 ------------QGRHFFECMNKKWGIVPRIEHYGCMVDLLSRAGFLDEAHRLIESMPMK 424
Query: 251 --DVVSWGTMIDG 261
D V WG ++ G
Sbjct: 425 PNDAV-WGALLGG 436
>gi|413918675|gb|AFW58607.1| hypothetical protein ZEAMMB73_481408 [Zea mays]
Length = 694
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 169/443 (38%), Positives = 248/443 (55%), Gaps = 47/443 (10%)
Query: 227 MLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPN 286
+++ +A G V AR +F+ VV W ++ YL+ E + M++ ML G+A +
Sbjct: 161 LIHMYASCGDVAAARLVFDAAEESGVVMWNAIVAAYLKNGDWMEVVEMFKGMLEVGVAFD 220
Query: 287 DVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQF- 345
+V +V +++A CGRI A+L
Sbjct: 221 EVTLVSVVTA--------------------------------------CGRIGDAKLGKW 242
Query: 346 ------ELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQ 399
E G+ + AL+ + + G I AR+LF+ MQ RDV +WSAMISGY Q +Q
Sbjct: 243 VAGHVDEEGLARNPKLVTALMDMYAKCGEIGKARRLFDGMQSRDVVAWSAMISGYTQADQ 302
Query: 400 PNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAA 459
AL LF M A V+PN++TMVSV A A G L+ G+W H YV ++L L A
Sbjct: 303 CREALGLFSEMQLARVEPNDVTMVSVLSACAVLGALETGKWVHSYVRRKRLSLTTILGTA 362
Query: 460 IIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIK 519
++D YAKCG I+ A E F + + + W A+I G+A +G L+++S + + I+
Sbjct: 363 LVDFYAKCGCIDDAVEAFESMPVKNSWT--WTALIKGMATNGRGREALELFSSMREAGIE 420
Query: 520 LNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEE 579
+TFIGVL C H+ LV+ G R+F SM Y ++P ++HYGCMVDLLGRAG +++A +
Sbjct: 421 PTDVTFIGVLMACSHSCLVEEGRRHFDSMARDYGIKPRVEHYGCMVDLLGRAGLVDEAYQ 480
Query: 580 VIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGR 639
IR+MP++ + VIW LL++ +H NV +GE A K + L PSH VLLSNIYA AG+
Sbjct: 481 FIRTMPIEPNAVIWRALLSSCAVHRNVGIGEEALKQIISLNPSHSGDYVLLSNIYASAGQ 540
Query: 640 WEDAFSIRKEMRDCGMKRLPGFS 662
W+DA +RKEM+D G+++ PG S
Sbjct: 541 WKDAAMVRKEMKDRGIEKTPGCS 563
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 120/477 (25%), Positives = 205/477 (42%), Gaps = 103/477 (21%)
Query: 29 ALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLD 88
AL+ CS A+ G+ + + K GL ++ F+ +SLI++YA CG ++ A+ +FD+
Sbjct: 126 ALKSCSRMCALDVGRGVQAYAVKRGLVADRFVLSSLIHMYASCGDVAAARLVFDAAEE-- 183
Query: 89 PVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRI 148
SG V + +++ + +N W E +E+F+ M
Sbjct: 184 --------SGV---------------------VMWNAIVAAYLKNGDWMEVVEMFKGMLE 214
Query: 149 LGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVE 208
+GV +EVTL SV+++ +G + + G V + + + T L++MY
Sbjct: 215 VGVAFDEVTLVSVVTACGRIGDAKLGKWVAGHVDEEGLARNPKLVTALMDMY-------- 266
Query: 209 ARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERL 268
AK G + AR LF+ + S+DVV+W MI GY Q ++
Sbjct: 267 -----------------------AKCGEIGKARRLFDGMQSRDVVAWSAMISGYTQADQC 303
Query: 269 SEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATI 328
EAL ++ M + PNDV +V ++SAC A G +HS + + + +
Sbjct: 304 REALGLFSEMQLARVEPNDVTMVSVLSACAVLGALETGKWVHSYVRRKRLSLTTILGTAL 363
Query: 329 IHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWS 388
+ FYA CG I+ A FE + +W ALI G NG +A
Sbjct: 364 VDFYAKCGCIDDAVEAFESMPVKNSWTWTALIKGMATNGRGREA---------------- 407
Query: 389 AMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNN 448
LELF M +AG++P ++T + V A + S ++EGR + + +
Sbjct: 408 ---------------LELFSSMREAGIEPTDVTFIGVLMACSHSCLVEEGRRHFDSMARD 452
Query: 449 -SITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSP----WNAIICGLAMH 500
I ++D+ + G ++ A++ RT + P W A++ A+H
Sbjct: 453 YGIKPRVEHYGCMVDLLGRAGLVDEAYQFI-----RTMPIEPNAVIWRALLSSCAVH 504
Score = 129 bits (324), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 102/404 (25%), Positives = 175/404 (43%), Gaps = 55/404 (13%)
Query: 232 AKAGLVELARELFERIPSKDVVS--WGTMIDGYLQVERLSEALTMYRAMLCDGIA-PNDV 288
A L+ A LF P + + + ++ +L +AL ++ ML A P D
Sbjct: 61 ASPTLLPYAVSLFRLGPRPPLSTPCYNVLMRAFLHAGHPEDALHLFIEMLHAASACPADQ 120
Query: 289 MIVD-LISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFEL 347
+ +C R A G + + VK G F+ +++IH YA+CG + ARL
Sbjct: 121 HTAACALKSCSRMCALDVGRGVQAYAVKRGLVADRFVLSSLIHMYASCGDVAAARL---- 176
Query: 348 GIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELF 407
+F+ ++ V W+A+++ Y +N +E+F
Sbjct: 177 ---------------------------VFDAAEESGVVMWNAIVAAYLKNGDWMEVVEMF 209
Query: 408 HGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKC 467
GM++ GV +E+T+VSV A G K G+W +V + N L A++DMYAKC
Sbjct: 210 KGMLEVGVAFDEVTLVSVVTACGRIGDAKLGKWVAGHVDEEGLARNPKLVTALMDMYAKC 269
Query: 468 GSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIG 527
G I A +F ++ R V W+A+I G L ++S+++ ++ N +T +
Sbjct: 270 GEIGKARRLFDGMQSR--DVVAWSAMISGYTQADQCREALGLFSEMQLARVEPNDVTMVS 327
Query: 528 VLSTCCHAGLVDLGE-------RYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEV 580
VLS C G ++ G+ R S+ ++ +VD + G ++DA E
Sbjct: 328 VLSACAVLGALETGKWVHSYVRRKRLSLTTILGT--------ALVDFYAKCGCIDDAVEA 379
Query: 581 IRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSL--AGLQPS 622
SMP+K + W L+ +G S+ AG++P+
Sbjct: 380 FESMPVK-NSWTWTALIKGMATNGRGREALELFSSMREAGIEPT 422
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 90/374 (24%), Positives = 155/374 (41%), Gaps = 93/374 (24%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E+ LVS + C G+ + + + GL N + +L+++YAKCG I +A+ +FD
Sbjct: 221 EVTLVSVVTACGRIGDAKLGKWVAGHVDEEGLARNPKLVTALMDMYAKCGEIGKARRLFD 280
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+ D VA + MISGY + D+ REAL +
Sbjct: 281 GMQSRDVVAWSAMISGYTQADQC-------------------------------REALGL 309
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
F +M++ V PN+VT+ SV+S+ LG + + +H V + + I+ T L++ Y
Sbjct: 310 FSEMQLARVEPNDVTMVSVLSACAVLGALETGKWVHSYVRRKRLSLTTILGTALVDFYAK 369
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
C + +A F+ M +N +W ++ G A G
Sbjct: 370 CGCIDDAVEAFESMPVKNSWTWTALIKGMATNG--------------------------- 402
Query: 263 LQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD 322
R EAL ++ +M GI P DV + ++ AC HS +V+ G +D
Sbjct: 403 ----RGREALELFSSMREAGIEPTDVTFIGVLMACS-----------HSCLVEEGRRHFD 447
Query: 323 FIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ-K 381
++AR + GIK + + ++ R G++++A Q M +
Sbjct: 448 ----------------SMAR---DYGIKPRVEHYGCMVDLLGRAGLVDEAYQFIRTMPIE 488
Query: 382 RDVYSWSAMISGYA 395
+ W A++S A
Sbjct: 489 PNAVIWRALLSSCA 502
>gi|297734119|emb|CBI15366.3| unnamed protein product [Vitis vinifera]
Length = 783
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 184/636 (28%), Positives = 312/636 (49%), Gaps = 98/636 (15%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNS-LINLYAKCGLISQAKSMFDSCSTLD 88
L+ C + G+++H ++ S N F+ N+ +I +Y+ CG S
Sbjct: 112 LQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPS------------- 158
Query: 89 PVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDM-R 147
D+R VFDK K + +++ + +N+ + +A+ +F ++
Sbjct: 159 ------------------DSRMVFDKLRRKNLFQWNAIVSAYTRNELFEDAMSIFSELIS 200
Query: 148 ILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLV 207
+ P+ TL VI + L + +++HG+ K+ + V + L+ MY
Sbjct: 201 VTEHKPDNFTLPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMY------- 253
Query: 208 EARSLFDEMKERNIVSWNVMLNGFAKAGLVELA-RELFERIPSKDVVSWGTMIDGYLQVE 266
K GLVE A + +F+ + +K V SW ++ GY Q
Sbjct: 254 ------------------------GKCGLVEEAVKRVFDLMDTKTVSSWNALLCGYAQNS 289
Query: 267 RLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQA 326
+AL +Y M G+ P+ I L+ AC R + G +IH ++ G FI
Sbjct: 290 DPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGI 349
Query: 327 TIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYS 386
+++ Y CG+ A++ LF+ M+ R + S
Sbjct: 350 SLLSLYICCGKPFAAQV-------------------------------LFDGMEHRSLVS 378
Query: 387 WSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVL 446
W+ MI+GY+QN P+ A+ LF M+ G++P EI ++ V A + L+ G+ H + L
Sbjct: 379 WNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFAL 438
Query: 447 NNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLT 506
+T + +S++IIDMYAK G I + +F +R++ V+ WN II G +HG
Sbjct: 439 KAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREK--DVASWNVIIAGYGIHGRGKEA 496
Query: 507 LKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVD 566
L+++ + + +K + TF G+L C HAGLV+ G YF M +++N+EP L+HY C+VD
Sbjct: 497 LELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVD 556
Query: 567 LLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPS 626
+LGRAG+++DA +I MP D IW +LL++ RIHGN+ +GE+ A L L+P +
Sbjct: 557 MLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVANKLLELEPEKPEN 616
Query: 627 RVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
VL+SN++A +G+W+D +R M+D G+++ G S
Sbjct: 617 YVLISNLFAGSGKWDDVRRVRGRMKDIGLQKDAGCS 652
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 126/509 (24%), Positives = 226/509 (44%), Gaps = 98/509 (19%)
Query: 8 SVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINL 67
S+F+ + ++ L ++ C+ + + GQ IH + K L S+ F+ N+LI +
Sbjct: 193 SIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAM 252
Query: 68 YAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMI 127
Y KCGL+ +A + VFD K S+ +++
Sbjct: 253 YGKCGLVEEA------------------------------VKRVFDLMDTKTVSSWNALL 282
Query: 128 MGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIK--LM 185
G+AQN R+AL+++ M G+ P+ T+ S++ + + + +HG ++ L
Sbjct: 283 CGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLA 342
Query: 186 IDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFE 245
+D F+ IS LL++Y C A+ LFD M+ R++VSWNVM+ G+++ GL +
Sbjct: 343 VDPFIGIS--LLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPD------- 393
Query: 246 RIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGE 305
EA+ ++R ML DGI P ++ I+ + AC + A
Sbjct: 394 ------------------------EAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRL 429
Query: 306 GLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIR 365
G ++H +KA F+ ++II YA G I L++ F+ + +ASWN +IAG
Sbjct: 430 GKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAG--- 486
Query: 366 NGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSV 425
Y + + ALELF M+ G+KP++ T +
Sbjct: 487 ----------------------------YGIHGRGKEALELFEKMLRLGLKPDDFTFTGI 518
Query: 426 FCAIASSGTLKEGRWAHEYVLN-NSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRT 484
A + +G +++G +LN ++I ++DM + G I+ A + +
Sbjct: 519 LMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDP 578
Query: 485 TSVSPWNAIICGLAMHGDANLTLKIYSDL 513
S W++++ +HG+ L K+ + L
Sbjct: 579 DS-RIWSSLLSSCRIHGNLGLGEKVANKL 606
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 108/251 (43%), Gaps = 32/251 (12%)
Query: 293 LISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQAT-IIHFYAACGRINLARLQFELGIKD 351
L+ ACG+ G ++H ++ + C DF+ T II Y+ CG + +R+ F+ +
Sbjct: 111 LLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRK 170
Query: 352 HIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMV 411
++ WNA+++ + RN + EDA +F S +IS
Sbjct: 171 NLFQWNAIVSAYTRNELFEDAMSIF-----------SELISVTEH--------------- 204
Query: 412 DAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSIN 471
KP+ T+ V A A L G+ H + + + A+I MY KCG +
Sbjct: 205 ----KPDNFTLPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVE 260
Query: 472 TAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLST 531
A + + + D T +VS WNA++CG A + D L +Y + + + T +L
Sbjct: 261 EAVKRVFDLMD-TKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLA 319
Query: 532 CCHAGLVDLGE 542
C + GE
Sbjct: 320 CSRMKSLHYGE 330
>gi|296083884|emb|CBI24272.3| unnamed protein product [Vitis vinifera]
Length = 729
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 187/663 (28%), Positives = 318/663 (47%), Gaps = 78/663 (11%)
Query: 16 NLQNSDYELAL-VSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLI 74
+L N D + + S L+ C + G Q+H+ + +G++ F+ + L+ +Y + G +
Sbjct: 2 DLTNPDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCV 61
Query: 75 SQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQND 134
DAR +FDK + S+T+++ +
Sbjct: 62 E-------------------------------DARRMFDKMSERNVFSWTAIMEMYCGLG 90
Query: 135 CWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIIST 194
+ E +++F M GV P+ V + L + ++ ++ + +G +
Sbjct: 91 DYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKG 150
Query: 195 NLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVS 254
++L+M F K G +++AR FE I KDV
Sbjct: 151 SILDM-------------------------------FIKCGRMDIARRFFEEIEFKDVFM 179
Query: 255 WGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIV 314
W M+ GY +AL ++R M+ +G+ PN + I +SAC G +IH +
Sbjct: 180 WNIMVSGYTSKGEFKKALNVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCI 239
Query: 315 KAG-FDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIA--GFIRNGMIED 371
K D + +++ +YA C + +AR +F + + + SWNA++A GF + G +
Sbjct: 240 KVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAVTGFTQYGDGKA 299
Query: 372 ARQLFNNMQ----------KRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEIT 421
A + F M RDV W+++IS AQ+ + AL+L M + V+ N +T
Sbjct: 300 ALEFFQRMHIACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVT 359
Query: 422 MVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIR 481
MVS A + L++G+ H++++ + + + ++IDMY +CGSI + +F +
Sbjct: 360 MVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMP 419
Query: 482 DRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLG 541
R + WN +I MHG + ++ +K N ITF +LS C H+GL++ G
Sbjct: 420 QR--DLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEG 477
Query: 542 ERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASR 601
+YFK MK+ Y ++P ++ Y CMVDLL RAGQ + E I MP + + +WG+LL A R
Sbjct: 478 WKYFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGACR 537
Query: 602 IHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGF 661
IH N ++ E AA+ L L+P + VL++NIY+ AGRWEDA IR M++ G+ + PG
Sbjct: 538 IHCNPDLAEYAARYLFELEPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKERGVTKPPGC 597
Query: 662 SGV 664
S +
Sbjct: 598 SWI 600
>gi|356546093|ref|XP_003541466.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33680-like [Glycine max]
Length = 775
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 209/718 (29%), Positives = 326/718 (45%), Gaps = 137/718 (19%)
Query: 20 SDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKS 79
S L ++ AL +C+ H + +G+ +H+ I +G S+T I NSLINLYAKC S+A
Sbjct: 7 SHQHLQVLRALVHCTRHKQLRKGRALHARILVTGSFSSTQIANSLINLYAKCSHFSKANL 66
Query: 80 MFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREA 139
VFD K VS+ +I F+Q +
Sbjct: 67 -------------------------------VFDSINNKDVVSWNCLINAFSQQQAHAPS 95
Query: 140 LEVFRDMRIL-----GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIIST 194
L V R L ++PN TL V +++ L R H L +K V ++
Sbjct: 96 LHVMHLFRQLVMAHKTIVPNAHTLTGVFTAASTLSDSRAGRQAHALAVKTACSHDVFAAS 155
Query: 195 NLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVS 254
+LLNMYC + EAR LFDEM ERN VSW M++G+A L + A ELF+ + ++
Sbjct: 156 SLLNMYCKTGLVFEARDLFDEMPERNAVSWATMISGYASQELADEAFELFKLMRHEE--- 212
Query: 255 WGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIV 314
G N+ + ++SA M G Q+HS+ +
Sbjct: 213 --------------------------KGKNENEFVFTSVLSALTCYMLVNTGRQVHSLAM 246
Query: 315 KAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQ 374
K G C + ++ Y CG + A FEL + +W+A++ GF + G + A +
Sbjct: 247 KNGLVCIVSVANALVTMYVKCGSLEDALKTFELSGNKNSITWSAMVTGFAQFGDSDKALK 306
Query: 375 LFNNMQKR---------------------------------------DVYSWSAMISGYA 395
LF +M + +Y SA++ YA
Sbjct: 307 LFYDMHQSGELPSEFTLVGVINACSDACAIVEGRQMHGYSLKLGYELQLYVLSALVDMYA 366
Query: 396 QN-------------EQPNM------------------ALELFHGMVDAGVKPNEITMVS 424
+ +QP++ AL L+ M GV PN++TM S
Sbjct: 367 KCGSIVDARKGFECIQQPDVVLWTSIITGYVQNGDYEGALNLYGKMQLGGVIPNDLTMAS 426
Query: 425 VFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRT 484
V A ++ L +G+ H ++ + +L + +A+ MYAKCGS++ + +F+ + R
Sbjct: 427 VLKACSNLAALDQGKQMHAGIIKYNFSLEIPIGSALSAMYAKCGSLDDGYRIFWRMPAR- 485
Query: 485 TSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERY 544
V WNA+I GL+ +G N L+++ + K +++TF+ +LS C H GLVD G Y
Sbjct: 486 -DVISWNAMISGLSQNGRGNEGLELFEKMCLEGTKPDNVTFVNLLSACSHMGLVDRGWVY 544
Query: 545 FKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHG 604
FK M +N+ P ++HY CMVD+L RAG+L +A+E I S + + +W LLAAS+ H
Sbjct: 545 FKMMFDEFNIAPTVEHYACMVDILSRAGKLHEAKEFIESATVDHGLCLWRILLAASKNHR 604
Query: 605 NVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
+ ++G A + L L + VLLS+IY G+WED +R M+ G+ + PG S
Sbjct: 605 DYDLGAYAGEKLMELGSLESSAYVLLSSIYTALGKWEDVERVRGMMKARGVTKEPGCS 662
>gi|356519224|ref|XP_003528273.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
chloroplastic-like [Glycine max]
Length = 805
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 198/679 (29%), Positives = 323/679 (47%), Gaps = 104/679 (15%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKS-GLESNTFIQNSLINLYAKCGLISQAKSMFD 82
L + L+ C V G+ +H+ + K+ GL+ ++ SL+++Y KCG + A +FD
Sbjct: 155 FVLPNVLKACGVLKWVRFGKGVHAFVVKTIGLKECVYVATSLVDMYGKCGAVEDAGKVFD 214
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
S RND V++ SM++ +AQN +EA+ V
Sbjct: 215 EMSE--------------RND-----------------VTWNSMVVTYAQNGMNQEAIRV 243
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
FR+MR+ GV V L+ ++ + + E R HGL + ++ ++ ++++N Y
Sbjct: 244 FREMRLQGVEVTLVALSGFFTACANSEAVGEGRQGHGLAVVGGLELDNVLGSSIMNFY-- 301
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
K GL+E A +F + KDVV+W ++ GY
Sbjct: 302 -----------------------------FKVGLIEEAEVVFRNMAVKDVVTWNLVVAGY 332
Query: 263 LQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD 322
Q + +AL M M +G+ + V + L++ G++ H+ VK F+
Sbjct: 333 AQFGMVEKALEMCCVMREEGLRFDCVTLSALLAVAADTRDLVLGMKAHAYCVKNDFEGDV 392
Query: 323 FIQATIIHFYAACGRINLAR----------------------------------LQFEL- 347
+ + II YA CGR++ AR Q +L
Sbjct: 393 VVSSGIIDMYAKCGRMDCARRVFSCVRKKDIVLWNTMLAACAEQGLSGEALKLFFQMQLE 452
Query: 348 GIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVY----SWSAMISGYAQNEQPNMA 403
+ ++ SWN+LI GF +NG + +AR +F M V +W+ M+SG QN + A
Sbjct: 453 SVPPNVVSWNSLIFGFFKNGQVAEARNMFAEMCSSGVMPNLITWTTMMSGLVQNGFGSGA 512
Query: 404 LELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDM 463
+ +F M D G++PN +++ S S LK GR H YV+ ++ + ++ +I+DM
Sbjct: 513 MMVFREMQDVGIRPNSMSITSALSGCTSMALLKHGRAIHGYVMRRDLSQSIHIITSIMDM 572
Query: 464 YAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSI 523
YAKCGS++ A VF + V +NA+I A HG A L ++ +EK I + I
Sbjct: 573 YAKCGSLDGAKCVFKMCSTKELYV--YNAMISAYASHGQAREALVLFKQMEKEGIVPDHI 630
Query: 524 TFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRS 583
T VLS C H GL+ G + FK M S ++P +HYGC+V LL GQL++A I +
Sbjct: 631 TLTSVLSACSHGGLMKEGIKVFKYMVSELQMKPSEEHYGCLVKLLANDGQLDEALRTILT 690
Query: 584 MPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDA 643
MP D I G+LL A + ++E+ + AK L L P + + V LSN+YA G+W+
Sbjct: 691 MPSHPDAHILGSLLTACGQNNDIELADYIAKWLLKLDPDNSGNYVALSNVYAAVGKWDKV 750
Query: 644 FSIRKEMRDCGMKRLPGFS 662
++R M++ G++++PG S
Sbjct: 751 SNLRGLMKEKGLRKIPGCS 769
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 93/378 (24%), Positives = 177/378 (46%), Gaps = 42/378 (11%)
Query: 231 FAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMI 290
+AK G E A LF PS +V SW +I + + EAL Y M DG+ P++ ++
Sbjct: 98 YAKCGASEPATRLFRDSPSPNVFSWAAIIGLHTRTGFCEEALFGYIKMQQDGLPPDNFVL 157
Query: 291 VDLISACG--RAMAFGEGLQIHSIIVKA-GFDCYDFIQATIIHFYAACGRINLARLQFEL 347
+++ ACG + + FG+G +H+ +VK G ++ +++ Y CG + A F+
Sbjct: 158 PNVLKACGVLKWVRFGKG--VHAFVVKTIGLKECVYVATSLVDMYGKCGAVEDAGKVFDE 215
Query: 348 GIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELF 407
+ + +WN+++ + +NGM ++A ++F M+ + V +SG+
Sbjct: 216 MSERNDVTWNSMVVTYAQNGMNQEAIRVFREMRLQGVEVTLVALSGF------------- 262
Query: 408 HGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKC 467
F A A+S + EGR H + + L++ L ++I++ Y K
Sbjct: 263 ------------------FTACANSEAVGEGRQGHGLAVVGGLELDNVLGSSIMNFYFKV 304
Query: 468 GSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIG 527
G I A VF ++ + V WN ++ G A G L++ + + ++ + +T
Sbjct: 305 GLIEEAEVVFRNMAVK--DVVTWNLVVAGYAQFGMVEKALEMCCVMREEGLRFDCVTLSA 362
Query: 528 VLSTCCHAGLVDLGER-YFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPM 586
+L+ + LG + + +K+ + E D+ ++D+ + G+++ A V S
Sbjct: 363 LLAVAADTRDLVLGMKAHAYCVKN--DFEGDVVVSSGIIDMYAKCGRMDCARRVF-SCVR 419
Query: 587 KADVVIWGTLLAASRIHG 604
K D+V+W T+LAA G
Sbjct: 420 KKDIVLWNTMLAACAEQG 437
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 80/345 (23%), Positives = 153/345 (44%), Gaps = 40/345 (11%)
Query: 267 RLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAG--FDCYDFI 324
R+ EA+ M + + L+ C A LQ+H+ ++K G F DF+
Sbjct: 31 RIREAVNSLTQMHSLNLHVGPAIYGTLLQGCVYERALPLALQLHADVIKRGPTFALNDFV 90
Query: 325 QATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDV 384
+ ++ YA CG AS E A +LF + +V
Sbjct: 91 ISKLVILYAKCG-----------------AS--------------EPATRLFRDSPSPNV 119
Query: 385 YSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEY 444
+SW+A+I + + AL + M G+ P+ + +V A ++ G+ H +
Sbjct: 120 FSWAAIIGLHTRTGFCEEALFGYIKMQQDGLPPDNFVLPNVLKACGVLKWVRFGKGVHAF 179
Query: 445 VLNNSITLND--NLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGD 502
V+ +I L + ++ +++DMY KCG++ A +VF + +R WN+++ A +G
Sbjct: 180 VV-KTIGLKECVYVATSLVDMYGKCGAVEDAGKVFDEMSERNDVT--WNSMVVTYAQNGM 236
Query: 503 ANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYG 562
++++ ++ + +++ + G + C ++ V G R + V +E D
Sbjct: 237 NQEAIRVFREMRLQGVEVTLVALSGFFTACANSEAVGEG-RQGHGLAVVGGLELDNVLGS 295
Query: 563 CMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVE 607
+++ + G +E+AE V R+M +K DVV W ++A G VE
Sbjct: 296 SIMNFYFKVGLIEEAEVVFRNMAVK-DVVTWNLVVAGYAQFGMVE 339
>gi|297722071|ref|NP_001173399.1| Os03g0317100 [Oryza sativa Japonica Group]
gi|255674461|dbj|BAH92127.1| Os03g0317100 [Oryza sativa Japonica Group]
Length = 706
Score = 302 bits (774), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 188/574 (32%), Positives = 293/574 (51%), Gaps = 24/574 (4%)
Query: 93 NIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVI 152
N I+ R + AR F+ P++ SY +++ G+ +N AL +FR M
Sbjct: 21 NARIAHLARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRM------ 74
Query: 153 PNEVTLASVISSSVHLGGIWECRML----HGLVIKLMIDGFVIISTNLLNMYCVCSSLVE 208
P+ + S + + G+ R + + V+ T+LL Y L +
Sbjct: 75 PSR----DLASYNALISGLSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLAD 130
Query: 209 ARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERL 268
A LF +M ERN VS+ V+L G AG V AR LF+ +P +DVV+W M+ GY Q R+
Sbjct: 131 AIRLFQQMPERNHVSYTVLLGGLLDAGRVNEARRLFDEMPDRDVVAWTAMLSGYCQAGRI 190
Query: 269 SEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATI 328
+EA RA+ + N V +IS + ++ ++ + + +
Sbjct: 191 TEA----RALFDEMPKRNVVSWTAMISGYAQNGEVNLARKLFEVMPERN----EVSWTAM 242
Query: 329 IHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWS 388
+ Y G + A F + +A+ NA++ GF + GM++ A+ +F M +RD +WS
Sbjct: 243 LVGYIQAGHVEDAAELFNAMPEHPVAACNAMMVGFGQRGMVDAAKTVFEKMCERDDGTWS 302
Query: 389 AMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNN 448
AMI Y QNE AL F M+ GV+PN +++S+ A+ L GR H +L
Sbjct: 303 AMIKAYEQNEFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRC 362
Query: 449 SITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLK 508
S ++ +A+I MY KCG+++ A VF+ + + WN++I G A HG L
Sbjct: 363 SFDMDVFAVSALITMYIKCGNLDKAKRVFHTFEPKDIVM--WNSMITGYAQHGLGEQALG 420
Query: 509 IYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLL 568
I+ D+ + + IT+IG L+ C + G V G F SM ++ P +HY CMVDLL
Sbjct: 421 IFHDMRLAGMSPDGITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVDLL 480
Query: 569 GRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRV 628
GR+G +E+A ++I++MP++ D VIWG L+ A R+H N E+ E AAK L L+P + V
Sbjct: 481 GRSGLVEEAFDLIKNMPVEPDAVIWGALMGACRMHRNAEIAEFAAKKLLELEPGNAGPYV 540
Query: 629 LLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
LLS+IY GRWEDA +RK + + + PG S
Sbjct: 541 LLSHIYTSVGRWEDASKMRKFISSRNLNKSPGCS 574
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 135/510 (26%), Positives = 242/510 (47%), Gaps = 51/510 (10%)
Query: 35 AHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNI 94
AH+A + + F++ T N+L+ Y + L A +F + D + N
Sbjct: 25 AHLARAGNIEGARAAFEAMPLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDLASYNA 84
Query: 95 MISGY-IRNDRLNDAREVFDKTPIK-CCVSYTSMIMGFAQNDCWREALEVFRDMRILGVI 152
+ISG +R L DA P VS+TS++ G+ ++ +A+ +F+ M
Sbjct: 85 LISGLSLRRQTLPDAAAALASIPFPPSVVSFTSLLRGYVRHGLLADAIRLFQQMPER--- 141
Query: 153 PNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSL 212
N V+ ++ + G + E R L M D V+ T +L+ YC + EAR+L
Sbjct: 142 -NHVSYTVLLGGLLDAGRVNEARRL----FDEMPDRDVVAWTAMLSGYCQAGRITEARAL 196
Query: 213 FDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEAL 272
FDEM +RN+VSW M++G+A+ G V LAR+LFE +P ++ VSW M+ GY+Q + +A
Sbjct: 197 FDEMPKRNVVSWTAMISGYAQNGEVNLARKLFEVMPERNEVSWTAMLVGYIQAGHVEDAA 256
Query: 273 TMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIH----------SIIVKAGFDCYD 322
++ AM +A + M+V R M S ++KA ++ +
Sbjct: 257 ELFNAMPEHPVAACNAMMVGFGQ---RGMVDAAKTVFEKMCERDDGTWSAMIKA-YEQNE 312
Query: 323 FIQATIIHFYAACGR---------INLARLQFELGIKDH----------------IASWN 357
F+ + F R I++ + L + D+ + + +
Sbjct: 313 FLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVS 372
Query: 358 ALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKP 417
ALI +I+ G ++ A+++F+ + +D+ W++MI+GYAQ+ AL +FH M AG+ P
Sbjct: 373 ALITMYIKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMSP 432
Query: 418 NEITMVSVFCAIASSGTLKEGRWA-HEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEV 476
+ IT + A + +G +KEGR + +N+SI + ++D+ + G + AF++
Sbjct: 433 DGITYIGALTACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDL 492
Query: 477 FYHIRDRTTSVSPWNAIICGLAMHGDANLT 506
++ +V W A++ MH +A +
Sbjct: 493 IKNMPVEPDAVI-WGALMGACRMHRNAEIA 521
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 105/247 (42%), Gaps = 63/247 (25%)
Query: 25 ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSC 84
+++S L C+A + G+++H+ + + + + F ++LI +Y KCG + +AK +F +
Sbjct: 335 SVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMYIKCGNLDKAKRVFHTF 394
Query: 85 STLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFR 144
D V N SMI G+AQ+ +AL +F
Sbjct: 395 EPKDIVMWN-------------------------------SMITGYAQHGLGEQALGIFH 423
Query: 145 DMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCS 204
DMR+ G+ P+ +T +++ + G + E R + N V S
Sbjct: 424 DMRLAGMSPDGITYIGALTACSYTGKVKEGR-------------------EIFNSMTVNS 464
Query: 205 SLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIP-SKDVVSWGTMIDGYL 263
S+ ++ M++ ++GLVE A +L + +P D V WG ++ G
Sbjct: 465 SIRPGAE-----------HYSCMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALM-GAC 512
Query: 264 QVERLSE 270
++ R +E
Sbjct: 513 RMHRNAE 519
>gi|302144099|emb|CBI23204.3| unnamed protein product [Vitis vinifera]
Length = 907
Score = 302 bits (774), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 183/620 (29%), Positives = 311/620 (50%), Gaps = 95/620 (15%)
Query: 43 QQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRN 102
Q +H+ + + G S+ + NS++N+Y KCG + A+++F+
Sbjct: 166 QCLHACVIQYGFGSDVALANSMLNVYCKCGRVEDAQALFE-------------------- 205
Query: 103 DRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVI 162
L DAR+V +S+ S++ G+AQ RE L++ M+ G+ P++ T S++
Sbjct: 206 --LMDARDV---------ISWNSLVSGYAQLGNIREVLQLLIRMKTDGIEPDQQTFGSLV 254
Query: 163 SSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIV 222
S++ + +M+HG +++ ++ I T+L+ MY C
Sbjct: 255 SAAAMQSKLGVGKMVHGHILRAGLEQDSHIETSLIGMYLKC------------------- 295
Query: 223 SWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDG 282
G V A +FE + KDV+SW MI G +Q + A+T++R ML
Sbjct: 296 ------------GNVNSAFRIFEGMMHKDVISWTAMISGLVQNDCADMAVTVFRRMLKSR 343
Query: 283 IAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLAR 342
+ P+ I +++AC +F G +H I++ RI L
Sbjct: 344 VMPSTATIASVLAACAELGSFPLGTSVHGYILRQ--------------------RIKL-- 381
Query: 343 LQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNM 402
I S N+L+ + + G +E + +F+ M +RD+ SW+A++SG+AQN
Sbjct: 382 ---------DIPSQNSLVTMYAKCGHLEQSCSVFDRMSRRDIVSWNAIVSGHAQNGHLCK 432
Query: 403 ALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIID 462
AL LF+ M A +P+ IT+VS+ A AS G L +G+W H +V + + + A++D
Sbjct: 433 ALLLFNEMRKARQRPDSITVVSLLQACASIGALHQGKWIHNFVTKSCLGPCILIDTALVD 492
Query: 463 MYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNS 522
MY+KCG + +A + F + + + W++II G HG L++YSD I+ N
Sbjct: 493 MYSKCGDLGSAQKCFDRMPQQ--DLVSWSSIIAGYGSHGKGETALRMYSDFLHTGIQPNH 550
Query: 523 ITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIR 582
+ ++ +LS C H GLVD G +F SM + +EP L+H C+VDLL RAG++E+A +
Sbjct: 551 VIYLSILSACSHNGLVDQGLSFFHSMTKDFGIEPRLEHRACIVDLLSRAGRVEEAYSFYK 610
Query: 583 SMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWED 642
M K + + G LL A R GNVE+G+ A+ + L+P++ + V L++ YA RW+
Sbjct: 611 RMFPKPSMDVLGILLDACRTTGNVELGDIVAREIVILKPANAGNYVQLAHSYASMKRWDG 670
Query: 643 AFSIRKEMRDCGMKRLPGFS 662
+ +M+ +K+LPG+S
Sbjct: 671 VGEVWTQMKSLHLKKLPGWS 690
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 150/598 (25%), Positives = 261/598 (43%), Gaps = 102/598 (17%)
Query: 28 SALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTL 87
S ++ C++ S G H + G S+++I SLIN Y+K G A+ +FD+
Sbjct: 53 SLVKACTSLDLFSHGLSFHQRVIVDGYSSDSYIATSLINFYSKFGHNQSARKVFDTM--- 109
Query: 88 DPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMR 147
D R V V +T+MI + + A ++ MR
Sbjct: 110 -------------------DDRNV---------VPWTTMIGCYTRAGEHDVAFSMYNIMR 141
Query: 148 ILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLV 207
G+ P+ VT+ ++S + L + +C LH VI+ V ++ ++LN+YC C +
Sbjct: 142 RQGIQPSSVTMLGLLSGVLELVHL-QC--LHACVIQYGFGSDVALANSMLNVYCKCGRVE 198
Query: 208 EARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVER 267
+A++LF+ M R+++SWN +++G+A+ G
Sbjct: 199 DAQALFELMDARDVISWNSLVSGYAQLG-------------------------------N 227
Query: 268 LSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQAT 327
+ E L + M DGI P+ L+SA G G +H I++AG + I+ +
Sbjct: 228 IREVLQLLIRMKTDGIEPDQQTFGSLVSAAAMQSKLGVGKMVHGHILRAGLEQDSHIETS 287
Query: 328 IIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSW 387
+I Y CG +N A FE + + SW A+I+G ++
Sbjct: 288 LIGMYLKCGNVNSAFRIFEGMMHKDVISWTAMISGLVQ---------------------- 325
Query: 388 SAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLN 447
N+ +MA+ +F M+ + V P+ T+ SV A A G+ G H Y+L
Sbjct: 326 ---------NDCADMAVTVFRRMLKSRVMPSTATIASVLAACAELGSFPLGTSVHGYILR 376
Query: 448 NSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTL 507
I L+ +++ MYAKCG + + VF + R + WNAI+ G A +G L
Sbjct: 377 QRIKLDIPSQNSLVTMYAKCGHLEQSCSVFDRMSRR--DIVSWNAIVSGHAQNGHLCKAL 434
Query: 508 KIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDL 567
+++++ K + +SIT + +L C G + G ++ + + + P + +VD+
Sbjct: 435 LLFNEMRKARQRPDSITVVSLLQACASIGALHQG-KWIHNFVTKSCLGPCILIDTALVDM 493
Query: 568 LGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSL--AGLQPSH 623
+ G L A++ MP + D+V W +++A HG E R G+QP+H
Sbjct: 494 YSKCGDLGSAQKCFDRMPQQ-DLVSWSSIIAGYGSHGKGETALRMYSDFLHTGIQPNH 550
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 102/437 (23%), Positives = 184/437 (42%), Gaps = 94/437 (21%)
Query: 42 GQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIR 101
G+ +H I ++GLE ++ I+ SLI +Y KCG ++ A +F+ D ++ MISG +
Sbjct: 266 GKMVHGHILRAGLEQDSHIETSLIGMYLKCGNVNSAFRIFEGMMHKDVISWTAMISGLV- 324
Query: 102 NDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASV 161
QNDC A+ VFR M V+P+ T+ASV
Sbjct: 325 ------------------------------QNDCADMAVTVFRRMLKSRVMPSTATIASV 354
Query: 162 ISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNI 221
+++ LG +HG +++ I + +L+ MY C L ++ S+FD M R+I
Sbjct: 355 LAACAELGSFPLGTSVHGYILRQRIKLDIPSQNSLVTMYAKCGHLEQSCSVFDRMSRRDI 414
Query: 222 VSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCD 281
VSWN +++G A+ G L +AL ++ M
Sbjct: 415 VSWNAIVSGHAQNG-------------------------------HLCKALLLFNEMRKA 443
Query: 282 GIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLA 341
P+ + +V L+ AC A +G IH+ + K+ I ++ Y+ CG + A
Sbjct: 444 RQRPDSITVVSLLQACASIGALHQGKWIHNFVTKSCLGPCILIDTALVDMYSKCGDLGSA 503
Query: 342 RLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPN 401
+ F+ + + SW+++IAG+ +G E
Sbjct: 504 QKCFDRMPQQDLVSWSSIIAGYGSHGKGE------------------------------- 532
Query: 402 MALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG-RWAHEYVLNNSITLNDNLSAAI 460
AL ++ + G++PN + +S+ A + +G + +G + H + I A I
Sbjct: 533 TALRMYSDFLHTGIQPNHVIYLSILSACSHNGLVDQGLSFFHSMTKDFGIEPRLEHRACI 592
Query: 461 IDMYAKCGSINTAFEVF 477
+D+ ++ G + A+ +
Sbjct: 593 VDLLSRAGRVEEAYSFY 609
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 137/318 (43%), Gaps = 63/318 (19%)
Query: 25 ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSC 84
+ S L C+ + G +H I + ++ + QNSL+ +YAKCG + Q+ S+FD
Sbjct: 350 TIASVLAACAELGSFPLGTSVHGYILRQRIKLDIPSQNSLVTMYAKCGHLEQSCSVFDRM 409
Query: 85 STLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFR 144
S D V+ N ++SG+ +N L C +AL +F
Sbjct: 410 SRRDIVSWNAIVSGHAQNGHL-------------C------------------KALLLFN 438
Query: 145 DMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCS 204
+MR P+ +T+ S++ + +G + + + +H V K + ++I T L++MY C
Sbjct: 439 EMRKARQRPDSITVVSLLQACASIGALHQGKWIHNFVTKSCLGPCILIDTALVDMYSKCG 498
Query: 205 SLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQ 264
L A+ FD M ++++VSW+ ++ G+ G E
Sbjct: 499 DLGSAQKCFDRMPQQDLVSWSSIIAGYGSHGKGE-------------------------- 532
Query: 265 VERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQ-IHSIIVKAGFDCYDF 323
AL MY L GI PN V+ + ++SAC +GL HS+ G +
Sbjct: 533 -----TALRMYSDFLHTGIQPNHVIYLSILSACSHNGLVDQGLSFFHSMTKDFGIEPRLE 587
Query: 324 IQATIIHFYAACGRINLA 341
+A I+ + GR+ A
Sbjct: 588 HRACIVDLLSRAGRVEEA 605
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/341 (19%), Positives = 137/341 (40%), Gaps = 44/341 (12%)
Query: 265 VERLSEA------LTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGF 318
+ RLS A L Y +ML P+ L+ AC F GL H ++ G+
Sbjct: 20 INRLSTAGAFCDVLLTYSSMLSTDTPPDAHTFPSLVKACTSLDLFSHGLSFHQRVIVDGY 79
Query: 319 DCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNN 378
+I ++I+FY+ G AR F+ ++ W +I + R G + A ++N
Sbjct: 80 SSDSYIATSLINFYSKFGHNQSARKVFDTMDDRNVVPWTTMIGCYTRAGEHDVAFSMYNI 139
Query: 379 MQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG 438
M+++ G++P+ +TM+ + + L
Sbjct: 140 MRRQ-------------------------------GIQPSSVTMLGLLSGVLE---LVHL 165
Query: 439 RWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLA 498
+ H V+ + L+ +++++Y KCG + A +F + R V WN+++ G A
Sbjct: 166 QCLHACVIQYGFGSDVALANSMLNVYCKCGRVEDAQALFELMDAR--DVISWNSLVSGYA 223
Query: 499 MHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDL 558
G+ L++ ++ I+ + TF ++S + +G+ + +E D
Sbjct: 224 QLGNIREVLQLLIRMKTDGIEPDQQTFGSLVSAAAMQSKLGVGKMVHGHILRA-GLEQDS 282
Query: 559 KHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAA 599
++ + + G + A + M M DV+ W +++
Sbjct: 283 HIETSLIGMYLKCGNVNSAFRIFEGM-MHKDVISWTAMISG 322
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 107/247 (43%), Gaps = 38/247 (15%)
Query: 9 VFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLY 68
+FN + Q D + +VS L+ C++ A+ QG+ IH+ + KS L I +L+++Y
Sbjct: 436 LFNEMRKARQRPD-SITVVSLLQACASIGALHQGKWIHNFVTKSCLGPCILIDTALVDMY 494
Query: 69 AKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIM 128
+KCG + A+ FD + P + VS++S+I
Sbjct: 495 SKCGDLGSAQKCFD-------------------------------RMPQQDLVSWSSIIA 523
Query: 129 GFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWE-CRMLHGLVIKLMID 187
G+ + AL ++ D G+ PN V S++S+ H G + + H + I+
Sbjct: 524 GYGSHGKGETALRMYSDFLHTGIQPNHVIYLSILSACSHNGLVDQGLSFFHSMTKDFGIE 583
Query: 188 GFVIISTNLLNMYCVCSSLVEARSLFDEM-KERNIVSWNVMLNGFAKAGLVEL----ARE 242
+ ++++ + EA S + M + ++ ++L+ G VEL ARE
Sbjct: 584 PRLEHRACIVDLLSRAGRVEEAYSFYKRMFPKPSMDVLGILLDACRTTGNVELGDIVARE 643
Query: 243 LFERIPS 249
+ P+
Sbjct: 644 IVILKPA 650
>gi|356555301|ref|XP_003545972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 858
Score = 302 bits (773), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 183/640 (28%), Positives = 312/640 (48%), Gaps = 95/640 (14%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E ++ L C+ G++IH L+ K GL+ + F N+L+++Y+K G I A ++F
Sbjct: 183 EFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAVFQ 242
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+ D V+ N +I+G CV + DC AL +
Sbjct: 243 DIAHPDVVSWNAIIAG---------------------CVLH----------DCNDLALML 271
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
+M+ G PN TL+S + + +G R LH +IK+ + + L++MY
Sbjct: 272 LDEMKGSGTRPNMFTLSSALKACAAMGFKELGRQLHSSLIKMDAHSDLFAAVGLVDMYSK 331
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
C + +AR +D M P KD+++W +I GY
Sbjct: 332 CEMMDDARRAYDSM-------------------------------PKKDIIAWNALISGY 360
Query: 263 LQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD 322
Q +A++++ M + I N + ++ + A QIH+I +K+G
Sbjct: 361 SQCGDHLDAVSLFSKMFSEDIDFNQTTLSTVLKSVASLQAIKVCKQIHTISIKSGIYSDF 420
Query: 323 FIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKR 382
++ +++ Y C I ++A ++F
Sbjct: 421 YVINSLLDTYGKCNHI-------------------------------DEASKIFEERTWE 449
Query: 383 DVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAH 442
D+ ++++MI+ Y+Q AL+L+ M DA +KP+ S+ A A+ ++G+ H
Sbjct: 450 DLVAYTSMITAYSQYGDGEEALKLYLQMQDADIKPDPFICSSLLNACANLSAYEQGKQLH 509
Query: 443 EYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGD 502
+ + + S ++++MYAKCGSI A F I +R + W+A+I G A HG
Sbjct: 510 VHAIKFGFMCDIFASNSLVNMYAKCGSIEDADRAFSEIPNR--GIVSWSAMIGGYAQHGH 567
Query: 503 ANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYG 562
L++++ + + + N IT + VL C HAGLV+ G++YF+ M+ ++ ++P +HY
Sbjct: 568 GKEALRLFNQMLRDGVPPNHITLVSVLCACNHAGLVNEGKQYFEKMEVMFGIKPTQEHYA 627
Query: 563 CMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPS 622
CM+DLLGR+G+L +A E++ S+P +AD +WG LL A+RIH N+E+G++AAK L L+P
Sbjct: 628 CMIDLLGRSGKLNEAVELVNSIPFEADGFVWGALLGAARIHKNIELGQKAAKMLFDLEPE 687
Query: 623 HGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
+ VLL+NIYA AG WE+ +RK M+D +K+ PG S
Sbjct: 688 KSGTHVLLANIYASAGMWENVAKVRKFMKDSKVKKEPGMS 727
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 153/656 (23%), Positives = 273/656 (41%), Gaps = 146/656 (22%)
Query: 44 QIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRND 103
++H+ + K G + ++N L+ LY+KC A+ + D S LD V+ + ++SGY++N
Sbjct: 2 ELHAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQN- 60
Query: 104 RLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVIS 163
GF + EAL VF +M +LGV NE T SV+
Sbjct: 61 -------------------------GFVE-----EALLVFNEMCLLGVKCNEFTFPSVLK 90
Query: 164 SSVHLGGIWECRMLHGL--VIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNI 221
+ + R +HG+ V DGFV + L+ MY C L ++R LF + ERN+
Sbjct: 91 ACSMKRDLNMGRKVHGMAVVTGFESDGFV--ANTLVVMYAKCGLLDDSRRLFGGIVERNV 148
Query: 222 VSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCD 281
VSWN + + Y+Q E EA+ +++ M+
Sbjct: 149 VSWNALFS-------------------------------CYVQSELCGEAVGLFKEMVRS 177
Query: 282 GIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLA 341
GI PN+ I +++AC G +IH +++K G D F ++ Y+ G I A
Sbjct: 178 GIMPNEFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGA 237
Query: 342 RLQFELGIKDHIASWNALIAGFIRN----------------------------------- 366
F+ + SWNA+IAG + +
Sbjct: 238 VAVFQDIAHPDVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAM 297
Query: 367 GMIEDARQLFNNMQKRDVYS-----------------------------------WSAMI 391
G E RQL +++ K D +S W+A+I
Sbjct: 298 GFKELGRQLHSSLIKMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMPKKDIIAWNALI 357
Query: 392 SGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSIT 451
SGY+Q A+ LF M + N+ T+ +V ++AS +K + H + + I
Sbjct: 358 SGYSQCGDHLDAVSLFSKMFSEDIDFNQTTLSTVLKSVASLQAIKVCKQIHTISIKSGIY 417
Query: 452 LNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRT-TSVSPWNAIICGLAMHGDANLTLKIY 510
+ + +++D Y KC I+ A ++F +RT + + ++I + +GD LK+Y
Sbjct: 418 SDFYVINSLLDTYGKCNHIDEASKIF---EERTWEDLVAYTSMITAYSQYGDGEEALKLY 474
Query: 511 SDLEKRNIKLNSITFIGVLSTCCHAGLVDLGER-YFKSMKSVYNVEPDLKHYGCMVDLLG 569
++ +IK + +L+ C + + G++ + ++K + D+ +V++
Sbjct: 475 LQMQDADIKPDPFICSSLLNACANLSAYEQGKQLHVHAIK--FGFMCDIFASNSLVNMYA 532
Query: 570 RAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLA--GLQPSH 623
+ G +EDA+ +P + +V W ++ HG+ + R + G+ P+H
Sbjct: 533 KCGSIEDADRAFSEIPNRG-IVSWSAMIGGYAQHGHGKEALRLFNQMLRDGVPPNH 587
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 91/390 (23%), Positives = 162/390 (41%), Gaps = 94/390 (24%)
Query: 4 DHFHSVFNSQKANLQNSDY-ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQN 62
DH +V K ++ D+ + L + L+ ++ A+ +QIH++ KSG+ S+ ++ N
Sbjct: 365 DHLDAVSLFSKMFSEDIDFNQTTLSTVLKSVASLQAIKVCKQIHTISIKSGIYSDFYVIN 424
Query: 63 SLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVS 122
SL++ Y KC I +A +F+ + D VA
Sbjct: 425 SLLDTYGKCNHIDEASKIFEERTWEDLVA------------------------------- 453
Query: 123 YTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVI 182
YTSMI ++Q EAL+++ M+ + P+ +S++++ +L + + LH I
Sbjct: 454 YTSMITAYSQYGDGEEALKLYLQMQDADIKPDPFICSSLLNACANLSAYEQGKQLHVHAI 513
Query: 183 KLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARE 242
K + S +L+NMY C S+ +A F E+ R IVSW+ M+ G+A+ G
Sbjct: 514 KFGFMCDIFASNSLVNMYAKCGSIEDADRAFSEIPNRGIVSWSAMIGGYAQHG------- 566
Query: 243 LFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMA 302
EAL ++ ML DG+ PN + +V ++ AC A
Sbjct: 567 ------------------------HGKEALRLFNQMLRDGVPPNHITLVSVLCACNHAGL 602
Query: 303 FGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAG 362
EG Q +++ GIK + +I
Sbjct: 603 VNEGKQY------------------------------FEKMEVMFGIKPTQEHYACMIDL 632
Query: 363 FIRNGMIEDARQLFNNMQ-KRDVYSWSAMI 391
R+G + +A +L N++ + D + W A++
Sbjct: 633 LGRSGKLNEAVELVNSIPFEADGFVWGALL 662
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 129/297 (43%), Gaps = 35/297 (11%)
Query: 307 LQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRN 366
+++H+ ++K GF ++ ++ Y+ C R AR + + + SW++L++G+++N
Sbjct: 1 MELHAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQN 60
Query: 367 GMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVF 426
G +E+A +FN M GVK NE T SV
Sbjct: 61 GFVEEALLVFNE-------------------------------MCLLGVKCNEFTFPSVL 89
Query: 427 CAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTS 486
A + L GR H + + ++ ++ MYAKCG ++ + +F I +R +
Sbjct: 90 KACSMKRDLNMGRKVHGMAVVTGFESDGFVANTLVVMYAKCGLLDDSRRLFGGIVER--N 147
Query: 487 VSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFK 546
V WNA+ + ++ ++ + I N + +L+ C DLG +
Sbjct: 148 VVSWNALFSCYVQSELCGEAVGLFKEMVRSGIMPNEFSISIILNACAGLQEGDLGRKIHG 207
Query: 547 SMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIH 603
M + ++ D +VD+ +AG++E A V + + DVV W ++A +H
Sbjct: 208 LMLKM-GLDLDQFSANALVDMYSKAGEIEGAVAVFQDIA-HPDVVSWNAIIAGCVLH 262
>gi|354805159|gb|AER41579.1| CRR4 [Oryza brachyantha]
Length = 626
Score = 302 bits (773), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 169/532 (31%), Positives = 281/532 (52%), Gaps = 46/532 (8%)
Query: 138 EALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLL 197
+AL + M GV PN T ++ + LG CR +HG +++ V + LL
Sbjct: 88 DALAAYTAMLAAGVPPNGFTFTFLLRACALLGFPRPCRCVHGQIVRWGFGSEVFVQNTLL 147
Query: 198 NMYCVCSS---LVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVS 254
++Y C + AR +FDEM +R++VSWN ++ + +G A ELFE +P ++VVS
Sbjct: 148 DVYYRCGGPGRVAAARQVFDEMVDRDVVSWNSIIGVYMSSGDYTGAMELFEAMPERNVVS 207
Query: 255 WGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIV 314
W T++ G+ +V + A T++ M ++MI
Sbjct: 208 WNTLVAGFARVGDMVTAQTVFDRMPSRNAISWNLMISG---------------------- 245
Query: 315 KAGFDCYDFIQATIIHFYAACGRINLARLQFE-LGIKDHIASWNALIAGFIRNGMIEDAR 373
YA+ G + AR F+ + K + SW A+++ + + G ++ A+
Sbjct: 246 -----------------YASSGDVEAARSMFDRMDQKKDVVSWTAMVSAYAKIGDLDTAK 288
Query: 374 QLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAG-VKPNEITMVSVFCAIASS 432
+LF++M +++ SW+AMI+GY N + AL F M+ G +P+E T+VSV A A
Sbjct: 289 ELFDHMPLKNLVSWNAMITGYNHNSRYGEALRTFQLMMLEGRFRPDEATLVSVVSACAQL 348
Query: 433 GTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNA 492
G+++ W ++ +++ L L A+IDM+AKCG + A +FY ++ R + W
Sbjct: 349 GSVEYCNWISSFIRKSNVHLTIALGNALIDMFAKCGDVGRAQSIFYEMKTRC--IITWTT 406
Query: 493 IICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVY 552
+I G A +G L +Y+++ + ++L+ + FI L+ C H GL+ G F M Y
Sbjct: 407 MISGFAFNGLCREALLVYNNMCREGVELDDMVFIAALAACVHGGLLQEGWSIFNEMVEQY 466
Query: 553 NVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERA 612
N++P ++HYGC+VDLLGRAG L++A I SMP++ VVIW TLL++ HGN E +
Sbjct: 467 NIQPRMEHYGCVVDLLGRAGNLQEAVLFIESMPLEPSVVIWATLLSSCVAHGNAEFIDYV 526
Query: 613 AKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
+K + L+P + +VL+SN A GRW+ R MR+ G++++PG S +
Sbjct: 527 SKKITELEPFNSSYQVLVSNSSALEGRWDGVIGARTIMRNWGIEKVPGSSSI 578
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 122/483 (25%), Positives = 213/483 (44%), Gaps = 82/483 (16%)
Query: 45 IHSLIFKSGLESNTFIQNSLINLYAKCG---LISQAKSMFDSCSTLDPVACNIMISGYIR 101
+H I + G S F+QN+L+++Y +CG ++ A+ +FD D V+ N +I Y+
Sbjct: 127 VHGQIVRWGFGSEVFVQNTLLDVYYRCGGPGRVAAARQVFDEMVDRDVVSWNSIIGVYMS 186
Query: 102 NDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASV 161
+ A E+F+ P + VS+ +++ GFA+ A VF M P+ ++
Sbjct: 187 SGDYTGAMELFEAMPERNVVSWNTLVAGFARVGDMVTAQTVFDRM------PSRNAIS-- 238
Query: 162 ISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEM-KERN 220
W LMI G Y + ARS+FD M ++++
Sbjct: 239 ----------W----------NLMISG-----------YASSGDVEAARSMFDRMDQKKD 267
Query: 221 IVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLC 280
+VSW M++ +AK G ++ A+ELF+ +P K++VSW MI GY R EAL ++ M+
Sbjct: 268 VVSWTAMVSAYAKIGDLDTAKELFDHMPLKNLVSWNAMITGYNHNSRYGEALRTFQLMML 327
Query: 281 DG-IAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRIN 339
+G P++ +V ++SAC + + I S I K+ + +I +A CG +
Sbjct: 328 EGRFRPDEATLVSVVSACAQLGSVEYCNWISSFIRKSNVHLTIALGNALIDMFAKCGDVG 387
Query: 340 LARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQ 399
A+ F I +W +I+GF NG+ +A ++NNM +
Sbjct: 388 RAQSIFYEMKTRCIITWTTMISGFAFNGLCREALLVYNNMCRE----------------- 430
Query: 400 PNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWA--HEYVLNNSITLNDNLS 457
GV+ +++ ++ A G L+EG W+ +E V +I
Sbjct: 431 --------------GVELDDMVFIAALAACVHGGLLQEG-WSIFNEMVEQYNIQPRMEHY 475
Query: 458 AAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANL---TLKIYSDLE 514
++D+ + G++ A +F SV W ++ HG+A K ++LE
Sbjct: 476 GCVVDLLGRAGNLQEAV-LFIESMPLEPSVVIWATLLSSCVAHGNAEFIDYVSKKITELE 534
Query: 515 KRN 517
N
Sbjct: 535 PFN 537
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 92/344 (26%), Positives = 165/344 (47%), Gaps = 23/344 (6%)
Query: 269 SEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQ-IHSIIVKAGFDCYDFIQAT 327
++AL Y AML G+ PN L+ AC + F + +H IV+ GF F+Q T
Sbjct: 87 ADALAAYTAMLAAGVPPNGFTFTFLLRACA-LLGFPRPCRCVHGQIVRWGFGSEVFVQNT 145
Query: 328 IIHFYAACG---RINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDV 384
++ Y CG R+ AR F+ + + SWN++I ++ +G A +LF M +R+V
Sbjct: 146 LLDVYYRCGGPGRVAAARQVFDEMVDRDVVSWNSIIGVYMSSGDYTGAMELFEAMPERNV 205
Query: 385 YSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEY 444
SW+ +++G+A+ A +F M N I+ + ASSG ++ R
Sbjct: 206 VSWNTLVAGFARVGDMVTAQTVFDRMPSR----NAISWNLMISGYASSGDVEAAR----S 257
Query: 445 VLNNSITLNDNLS-AAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGL---AMH 500
+ + D +S A++ YAK G ++TA E+F H+ + ++ WNA+I G + +
Sbjct: 258 MFDRMDQKKDVVSWTAMVSAYAKIGDLDTAKELFDHMPLK--NLVSWNAMITGYNHNSRY 315
Query: 501 GDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKH 560
G+A T ++ LE R + + T + V+S C G V+ + S NV +
Sbjct: 316 GEALRTFQLMM-LEGR-FRPDEATLVSVVSACAQLGSVEYCN-WISSFIRKSNVHLTIAL 372
Query: 561 YGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHG 604
++D+ + G + A+ + M + ++ W T+++ +G
Sbjct: 373 GNALIDMFAKCGDVGRAQSIFYEMKTRC-IITWTTMISGFAFNG 415
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 100/243 (41%), Gaps = 72/243 (29%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E LVS + C+ +V I S I KS + + N+LI+++AKCG + +A+S+F
Sbjct: 335 EATLVSVVSACAQLGSVEYCNWISSFIRKSNVHLTIALGNALIDMFAKCGDVGRAQSIFY 394
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
T +C +++T+MI GFA N REAL V
Sbjct: 395 EMKT-------------------------------RCIITWTTMISGFAFNGLCREALLV 423
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
+ +M GV +++ + +++ VH GG+
Sbjct: 424 YNNMCREGVELDDMVFIAALAACVH-GGL------------------------------- 451
Query: 203 CSSLVEARSLFDEMKER-----NIVSWNVMLNGFAKAGLVELARELFERIP-SKDVVSWG 256
L E S+F+EM E+ + + +++ +AG ++ A E +P VV W
Sbjct: 452 ---LQEGWSIFNEMVEQYNIQPRMEHYGCVVDLLGRAGNLQEAVLFIESMPLEPSVVIWA 508
Query: 257 TMI 259
T++
Sbjct: 509 TLL 511
>gi|359483391|ref|XP_003632946.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g04370-like [Vitis vinifera]
Length = 732
Score = 302 bits (773), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 183/620 (29%), Positives = 311/620 (50%), Gaps = 95/620 (15%)
Query: 43 QQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRN 102
Q +H+ + + G S+ + NS++N+Y KCG + A+++F+
Sbjct: 166 QCLHACVIQYGFGSDVALANSMLNVYCKCGRVEDAQALFE-------------------- 205
Query: 103 DRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVI 162
L DAR+V +S+ S++ G+AQ RE L++ M+ G+ P++ T S++
Sbjct: 206 --LMDARDV---------ISWNSLVSGYAQLGNIREVLQLLIRMKTDGIEPDQQTFGSLV 254
Query: 163 SSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIV 222
S++ + +M+HG +++ ++ I T+L+ MY C
Sbjct: 255 SAAAMQSKLGVGKMVHGHILRAGLEQDSHIETSLIGMYLKC------------------- 295
Query: 223 SWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDG 282
G V A +FE + KDV+SW MI G +Q + A+T++R ML
Sbjct: 296 ------------GNVNSAFRIFEGMMHKDVISWTAMISGLVQNDCADMAVTVFRRMLKSR 343
Query: 283 IAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLAR 342
+ P+ I +++AC +F G +H I++ RI L
Sbjct: 344 VMPSTATIASVLAACAELGSFPLGTSVHGYILRQ--------------------RIKL-- 381
Query: 343 LQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNM 402
I S N+L+ + + G +E + +F+ M +RD+ SW+A++SG+AQN
Sbjct: 382 ---------DIPSQNSLVTMYAKCGHLEQSCSVFDRMSRRDIVSWNAIVSGHAQNGHLCK 432
Query: 403 ALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIID 462
AL LF+ M A +P+ IT+VS+ A AS G L +G+W H +V + + + A++D
Sbjct: 433 ALLLFNEMRKARQRPDSITVVSLLQACASIGALHQGKWIHNFVTKSCLGPCILIDTALVD 492
Query: 463 MYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNS 522
MY+KCG + +A + F + + + W++II G HG L++YSD I+ N
Sbjct: 493 MYSKCGDLGSAQKCFDRMPQQ--DLVSWSSIIAGYGSHGKGETALRMYSDFLHTGIQPNH 550
Query: 523 ITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIR 582
+ ++ +LS C H GLVD G +F SM + +EP L+H C+VDLL RAG++E+A +
Sbjct: 551 VIYLSILSACSHNGLVDQGLSFFHSMTKDFGIEPRLEHRACIVDLLSRAGRVEEAYSFYK 610
Query: 583 SMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWED 642
M K + + G LL A R GNVE+G+ A+ + L+P++ + V L++ YA RW+
Sbjct: 611 RMFPKPSMDVLGILLDACRTTGNVELGDIVAREIVILKPANAGNYVQLAHSYASMKRWDG 670
Query: 643 AFSIRKEMRDCGMKRLPGFS 662
+ +M+ +K+LPG+S
Sbjct: 671 VGEVWTQMKSLHLKKLPGWS 690
Score = 199 bits (505), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 150/598 (25%), Positives = 261/598 (43%), Gaps = 102/598 (17%)
Query: 28 SALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTL 87
S ++ C++ S G H + G S+++I SLIN Y+K G A+ +FD+
Sbjct: 53 SLVKACTSLDLFSHGLSFHQRVIVDGYSSDSYIATSLINFYSKFGHNQSARKVFDTM--- 109
Query: 88 DPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMR 147
D R V V +T+MI + + A ++ MR
Sbjct: 110 -------------------DDRNV---------VPWTTMIGCYTRAGEHDVAFSMYNIMR 141
Query: 148 ILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLV 207
G+ P+ VT+ ++S + L + +C LH VI+ V ++ ++LN+YC C +
Sbjct: 142 RQGIQPSSVTMLGLLSGVLELVHL-QC--LHACVIQYGFGSDVALANSMLNVYCKCGRVE 198
Query: 208 EARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVER 267
+A++LF+ M R+++SWN +++G+A+ G
Sbjct: 199 DAQALFELMDARDVISWNSLVSGYAQLG-------------------------------N 227
Query: 268 LSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQAT 327
+ E L + M DGI P+ L+SA G G +H I++AG + I+ +
Sbjct: 228 IREVLQLLIRMKTDGIEPDQQTFGSLVSAAAMQSKLGVGKMVHGHILRAGLEQDSHIETS 287
Query: 328 IIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSW 387
+I Y CG +N A FE + + SW A+I+G ++
Sbjct: 288 LIGMYLKCGNVNSAFRIFEGMMHKDVISWTAMISGLVQ---------------------- 325
Query: 388 SAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLN 447
N+ +MA+ +F M+ + V P+ T+ SV A A G+ G H Y+L
Sbjct: 326 ---------NDCADMAVTVFRRMLKSRVMPSTATIASVLAACAELGSFPLGTSVHGYILR 376
Query: 448 NSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTL 507
I L+ +++ MYAKCG + + VF + R + WNAI+ G A +G L
Sbjct: 377 QRIKLDIPSQNSLVTMYAKCGHLEQSCSVFDRMSRR--DIVSWNAIVSGHAQNGHLCKAL 434
Query: 508 KIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDL 567
+++++ K + +SIT + +L C G + G ++ + + + P + +VD+
Sbjct: 435 LLFNEMRKARQRPDSITVVSLLQACASIGALHQG-KWIHNFVTKSCLGPCILIDTALVDM 493
Query: 568 LGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSL--AGLQPSH 623
+ G L A++ MP + D+V W +++A HG E R G+QP+H
Sbjct: 494 YSKCGDLGSAQKCFDRMPQQ-DLVSWSSIIAGYGSHGKGETALRMYSDFLHTGIQPNH 550
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 102/437 (23%), Positives = 184/437 (42%), Gaps = 94/437 (21%)
Query: 42 GQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIR 101
G+ +H I ++GLE ++ I+ SLI +Y KCG ++ A +F+ D ++ MISG +
Sbjct: 266 GKMVHGHILRAGLEQDSHIETSLIGMYLKCGNVNSAFRIFEGMMHKDVISWTAMISGLV- 324
Query: 102 NDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASV 161
QNDC A+ VFR M V+P+ T+ASV
Sbjct: 325 ------------------------------QNDCADMAVTVFRRMLKSRVMPSTATIASV 354
Query: 162 ISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNI 221
+++ LG +HG +++ I + +L+ MY C L ++ S+FD M R+I
Sbjct: 355 LAACAELGSFPLGTSVHGYILRQRIKLDIPSQNSLVTMYAKCGHLEQSCSVFDRMSRRDI 414
Query: 222 VSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCD 281
VSWN +++G A+ G L +AL ++ M
Sbjct: 415 VSWNAIVSGHAQNG-------------------------------HLCKALLLFNEMRKA 443
Query: 282 GIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLA 341
P+ + +V L+ AC A +G IH+ + K+ I ++ Y+ CG + A
Sbjct: 444 RQRPDSITVVSLLQACASIGALHQGKWIHNFVTKSCLGPCILIDTALVDMYSKCGDLGSA 503
Query: 342 RLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPN 401
+ F+ + + SW+++IAG+ +G E
Sbjct: 504 QKCFDRMPQQDLVSWSSIIAGYGSHGKGE------------------------------- 532
Query: 402 MALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG-RWAHEYVLNNSITLNDNLSAAI 460
AL ++ + G++PN + +S+ A + +G + +G + H + I A I
Sbjct: 533 TALRMYSDFLHTGIQPNHVIYLSILSACSHNGLVDQGLSFFHSMTKDFGIEPRLEHRACI 592
Query: 461 IDMYAKCGSINTAFEVF 477
+D+ ++ G + A+ +
Sbjct: 593 VDLLSRAGRVEEAYSFY 609
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 137/318 (43%), Gaps = 63/318 (19%)
Query: 25 ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSC 84
+ S L C+ + G +H I + ++ + QNSL+ +YAKCG + Q+ S+FD
Sbjct: 350 TIASVLAACAELGSFPLGTSVHGYILRQRIKLDIPSQNSLVTMYAKCGHLEQSCSVFDRM 409
Query: 85 STLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFR 144
S D V+ N ++SG+ +N L C +AL +F
Sbjct: 410 SRRDIVSWNAIVSGHAQNGHL-------------C------------------KALLLFN 438
Query: 145 DMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCS 204
+MR P+ +T+ S++ + +G + + + +H V K + ++I T L++MY C
Sbjct: 439 EMRKARQRPDSITVVSLLQACASIGALHQGKWIHNFVTKSCLGPCILIDTALVDMYSKCG 498
Query: 205 SLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQ 264
L A+ FD M ++++VSW+ ++ G+ G E
Sbjct: 499 DLGSAQKCFDRMPQQDLVSWSSIIAGYGSHGKGE-------------------------- 532
Query: 265 VERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQ-IHSIIVKAGFDCYDF 323
AL MY L GI PN V+ + ++SAC +GL HS+ G +
Sbjct: 533 -----TALRMYSDFLHTGIQPNHVIYLSILSACSHNGLVDQGLSFFHSMTKDFGIEPRLE 587
Query: 324 IQATIIHFYAACGRINLA 341
+A I+ + GR+ A
Sbjct: 588 HRACIVDLLSRAGRVEEA 605
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/341 (19%), Positives = 137/341 (40%), Gaps = 44/341 (12%)
Query: 265 VERLSEA------LTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGF 318
+ RLS A L Y +ML P+ L+ AC F GL H ++ G+
Sbjct: 20 INRLSTAGAFCDVLLTYSSMLSTDTPPDAHTFPSLVKACTSLDLFSHGLSFHQRVIVDGY 79
Query: 319 DCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNN 378
+I ++I+FY+ G AR F+ ++ W +I + R G + A ++N
Sbjct: 80 SSDSYIATSLINFYSKFGHNQSARKVFDTMDDRNVVPWTTMIGCYTRAGEHDVAFSMYNI 139
Query: 379 MQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG 438
M+++ G++P+ +TM+ + + L
Sbjct: 140 MRRQ-------------------------------GIQPSSVTMLGLLSGVLE---LVHL 165
Query: 439 RWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLA 498
+ H V+ + L+ +++++Y KCG + A +F + R V WN+++ G A
Sbjct: 166 QCLHACVIQYGFGSDVALANSMLNVYCKCGRVEDAQALFELMDAR--DVISWNSLVSGYA 223
Query: 499 MHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDL 558
G+ L++ ++ I+ + TF ++S + +G+ + +E D
Sbjct: 224 QLGNIREVLQLLIRMKTDGIEPDQQTFGSLVSAAAMQSKLGVGKMVHGHILRA-GLEQDS 282
Query: 559 KHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAA 599
++ + + G + A + M M DV+ W +++
Sbjct: 283 HIETSLIGMYLKCGNVNSAFRIFEGM-MHKDVISWTAMISG 322
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 107/247 (43%), Gaps = 38/247 (15%)
Query: 9 VFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLY 68
+FN + Q D + +VS L+ C++ A+ QG+ IH+ + KS L I +L+++Y
Sbjct: 436 LFNEMRKARQRPD-SITVVSLLQACASIGALHQGKWIHNFVTKSCLGPCILIDTALVDMY 494
Query: 69 AKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIM 128
+KCG + A+ FD + P + VS++S+I
Sbjct: 495 SKCGDLGSAQKCFD-------------------------------RMPQQDLVSWSSIIA 523
Query: 129 GFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWE-CRMLHGLVIKLMID 187
G+ + AL ++ D G+ PN V S++S+ H G + + H + I+
Sbjct: 524 GYGSHGKGETALRMYSDFLHTGIQPNHVIYLSILSACSHNGLVDQGLSFFHSMTKDFGIE 583
Query: 188 GFVIISTNLLNMYCVCSSLVEARSLFDEM-KERNIVSWNVMLNGFAKAGLVEL----ARE 242
+ ++++ + EA S + M + ++ ++L+ G VEL ARE
Sbjct: 584 PRLEHRACIVDLLSRAGRVEEAYSFYKRMFPKPSMDVLGILLDACRTTGNVELGDIVARE 643
Query: 243 LFERIPS 249
+ P+
Sbjct: 644 IVILKPA 650
>gi|413917533|gb|AFW57465.1| hypothetical protein ZEAMMB73_932577 [Zea mays]
Length = 677
Score = 302 bits (773), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 191/636 (30%), Positives = 324/636 (50%), Gaps = 41/636 (6%)
Query: 62 NSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCV 121
N+L+ Y + G I A+ +FD D ++ +++ Y AR VFD P + V
Sbjct: 43 NALLTSYGRRGRIQDAQQLFDRMPRRDVISWTALLTAYAEGGDFASARLVFDDMPRRNAV 102
Query: 122 SYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLV 181
S+ +++ + A +F N V+ +I+ G + E + ++G +
Sbjct: 103 SWNALLSLYLGAGRPAAAHALF----CKTPAKNAVSYGVIITGLARAGMLREAQAVYGEM 158
Query: 182 IKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELAR 241
+ D + S ++ Y + A +FD M R+++SW+ M++G K G V AR
Sbjct: 159 PPRLRDP--VGSNAMILGYLRAGEIDMALRVFDTMAARDVISWSSMVDGLCKYGTVSEAR 216
Query: 242 ELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAM 301
LFE +P ++VVSW +M+ GY++ E L ++ M +G+ N + + ++ C +A
Sbjct: 217 RLFEAMPERNVVSWTSMVRGYVKCGMYREGLLLFLDMRREGVQVNAITLSVVLDGCAQAS 276
Query: 302 AFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIA 361
GEG+Q+H ++ + GF F+ ++I Y+ G + AR F + I SWN+LI
Sbjct: 277 LVGEGIQVHCLMTRMGFVTDIFLDGSLIIMYSRFGWMVDARRVFAFMKQKDIVSWNSLIT 336
Query: 362 GFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMV---------- 411
G+++N MIEDA LF M +RD SW++++ G+A ++ELF M
Sbjct: 337 GYVQNNMIEDAHVLFKLMPERDAISWTSVVVGFANRGWMRESVELFEQMPVKDDIAWTAV 396
Query: 412 ---------------------DAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSI 450
G +PN + A+AS L +G AH Y +N
Sbjct: 397 ISSFIANGNHVSVVRWFCQMSQEGCRPNTAAFSCLLSALASLAMLNQGLQAHAYAVNMGW 456
Query: 451 TLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIY 510
+ + A+++ MYAKCG + A VF IR+ S+ N++I A HG A LK++
Sbjct: 457 IFDSAVHASLVTMYAKCGRLAEAHRVFSCIRN--PSLVAINSMISAFAQHGLAEDALKLF 514
Query: 511 SDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGR 570
+ ++ + N +TF+G+L+ C AGLV G YF+SM+SVY ++P+ HY CMV+LLG
Sbjct: 515 NRMQYDGQRPNHVTFLGILTACARAGLVQQGYNYFESMRSVYGIQPNPDHYTCMVNLLGH 574
Query: 571 AGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLL 630
AG L++A E+I SMP K W LL++S +H N+++ + AA+ L + P + +L
Sbjct: 575 AGFLDEALEMINSMPQKDYPDAWAALLSSSSLHSNLDLAKLAAQRLLEIDPYDTTAYRVL 634
Query: 631 SNIYADAGRWEDAFSIR-KEMRDCGMKRLPGFSGVV 665
+N+++ AG D ++ ++ + KR PG+S ++
Sbjct: 635 TNMFSSAGLKGDEEMVKVAQLSNMASKR-PGYSLII 669
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 118/525 (22%), Positives = 217/525 (41%), Gaps = 127/525 (24%)
Query: 48 LIFKSGLESNTFIQNSLINLY-------------------------------AKCGLISQ 76
L+F N N+L++LY A+ G++ +
Sbjct: 91 LVFDDMPRRNAVSWNALLSLYLGAGRPAAAHALFCKTPAKNAVSYGVIITGLARAGMLRE 150
Query: 77 AKSMFDSCST--LDPVACNIMISGYIRNDRLN---------------------------- 106
A++++ DPV N MI GY+R ++
Sbjct: 151 AQAVYGEMPPRLRDPVGSNAMILGYLRAGEIDMALRVFDTMAARDVISWSSMVDGLCKYG 210
Query: 107 ---DAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVIS 163
+AR +F+ P + VS+TSM+ G+ + +RE L +F DMR GV N +TL+ V+
Sbjct: 211 TVSEARRLFEAMPERNVVSWTSMVRGYVKCGMYREGLLLFLDMRREGVQVNAITLSVVLD 270
Query: 164 SSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVS 223
+ E +H L+ ++ + + +L+ MY +V+AR +F MK+++IVS
Sbjct: 271 GCAQASLVGEGIQVHCLMTRMGFVTDIFLDGSLIIMYSRFGWMVDARRVFAFMKQKDIVS 330
Query: 224 WNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAM----- 278
WN ++ G+ + ++E A LF+ +P +D +SW +++ G+ + E++ ++ M
Sbjct: 331 WNSLITGYVQNNMIEDAHVLFKLMPERDAISWTSVVVGFANRGWMRESVELFEQMPVKDD 390
Query: 279 ----------------------LC----DGIAPNDVMIVDLISACGRAMAFGEGLQIHSI 312
C +G PN L+SA +GLQ H+
Sbjct: 391 IAWTAVISSFIANGNHVSVVRWFCQMSQEGCRPNTAAFSCLLSALASLAMLNQGLQAHAY 450
Query: 313 IVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDA 372
V G+ + A+++ YA CGR+ A F + + N++I+ F ++G+ EDA
Sbjct: 451 AVNMGWIFDSAVHASLVTMYAKCGRLAEAHRVFSCIRNPSLVAINSMISAFAQHGLAEDA 510
Query: 373 RQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASS 432
+LFN MQ G +PN +T + + A A +
Sbjct: 511 LKLFNRMQYD-------------------------------GQRPNHVTFLGILTACARA 539
Query: 433 GTLKEGRWAHEYVLN-NSITLNDNLSAAIIDMYAKCGSINTAFEV 476
G +++G E + + I N + ++++ G ++ A E+
Sbjct: 540 GLVQQGYNYFESMRSVYGIQPNPDHYTCMVNLLGHAGFLDEALEM 584
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 91/389 (23%), Positives = 174/389 (44%), Gaps = 93/389 (23%)
Query: 33 CSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVAC 92
C+ V +G Q+H L+ + G ++ F+ SLI +Y++ G + A+ +F D V+
Sbjct: 272 CAQASLVGEGIQVHCLMTRMGFVTDIFLDGSLIIMYSRFGWMVDARRVFAFMKQKDIVSW 331
Query: 93 NIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVI 152
N +I+GY++N+ + DA +F P + +S+TS+++GFA RE++E+F M + I
Sbjct: 332 NSLITGYVQNNMIEDAHVLFKLMPERDAISWTSVVVGFANRGWMRESVELFEQMPVKDDI 391
Query: 153 PNEVTLASVISSSVHLGGI-WECRM---------------LHGLVIKLMID--------- 187
++S I++ H+ + W C+M L L M++
Sbjct: 392 AWTAVISSFIANGNHVSVVRWFCQMSQEGCRPNTAAFSCLLSALASLAMLNQGLQAHAYA 451
Query: 188 ---GFVI---ISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELAR 241
G++ + +L+ MY C L EA +F ++ ++V+ N M++ FA+ GL E A
Sbjct: 452 VNMGWIFDSAVHASLVTMYAKCGRLAEAHRVFSCIRNPSLVAINSMISAFAQHGLAEDAL 511
Query: 242 ELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAM 301
+LF R M DG PN V + +++AC RA
Sbjct: 512 KLFNR-------------------------------MQYDGQRPNHVTFLGILTACARA- 539
Query: 302 AFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIA 361
GL V+ G++ ++ +++ GI+ + + ++
Sbjct: 540 ----GL------VQQGYNYFESMRSV-------------------YGIQPNPDHYTCMVN 570
Query: 362 GFIRNGMIEDARQLFNNMQKRDVY-SWSA 389
G +++A ++ N+M ++D +W+A
Sbjct: 571 LLGHAGFLDEALEMINSMPQKDYPDAWAA 599
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 133/300 (44%), Gaps = 60/300 (20%)
Query: 354 ASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQ-----------NEQP-- 400
A NAL+ + R G I+DA+QLF+ M +RDV SW+A+++ YA+ ++ P
Sbjct: 40 AHLNALLTSYGRRGRIQDAQQLFDRMPRRDVISWTALLTAYAEGGDFASARLVFDDMPRR 99
Query: 401 -----NMALELF---------HGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAH---- 442
N L L+ H + N ++ + +A +G L+E + +
Sbjct: 100 NAVSWNALLSLYLGAGRPAAAHALFCKTPAKNAVSYGVIITGLARAGMLREAQAVYGEMP 159
Query: 443 ----EYVLNNSITLN--------------DNLSA-------AIIDMYAKCGSINTAFEVF 477
+ V +N++ L D ++A +++D K G+++ A +F
Sbjct: 160 PRLRDPVGSNAMILGYLRAGEIDMALRVFDTMAARDVISWSSMVDGLCKYGTVSEARRLF 219
Query: 478 YHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGL 537
+ +R +V W +++ G G L ++ D+ + +++N+IT VL C A L
Sbjct: 220 EAMPER--NVVSWTSMVRGYVKCGMYREGLLLFLDMRREGVQVNAITLSVVLDGCAQASL 277
Query: 538 VDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLL 597
V G + M + V D+ G ++ + R G + DA V M K D+V W +L+
Sbjct: 278 VGEGIQVHCLMTRMGFVT-DIFLDGSLIIMYSRFGWMVDARRVFAFMKQK-DIVSWNSLI 335
>gi|357467943|ref|XP_003604256.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355505311|gb|AES86453.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 670
Score = 302 bits (773), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 190/629 (30%), Positives = 299/629 (47%), Gaps = 113/629 (17%)
Query: 43 QQIHSLIFKSGLESNTFIQNSLINLYAK--------CGLISQAKSMFDSCSTLDPVACNI 94
+QIH+ + +S L N + N + K C + Q F S CN+
Sbjct: 101 KQIHAQLLRSTLVDNDLVVTKAANFFGKHVTDIRYPCNFLKQFDWSFSS------FPCNL 154
Query: 95 MISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPN 154
+ISGY A N W A+ ++R + G +P+
Sbjct: 155 IISGY------------------------------GAGNFPW-AAIRIYRWVVGNGFVPD 183
Query: 155 EVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFD 214
T+ +V+ S GI E + +H L +K + + + + +++Y +C V A +FD
Sbjct: 184 VYTVPAVLKSCARFSGIAEVKQIHTLAVKTDLWCDMFVQNSFVHVYSICGDTVGASKVFD 243
Query: 215 EMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTM 274
M P +DVVSW +I GY++ ++A+ +
Sbjct: 244 FM-------------------------------PVRDVVSWTGLISGYMKAGLFNDAVAL 272
Query: 275 YRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAA 334
+ M +APN V ++ ACG+ G IH ++ K + T++ Y
Sbjct: 273 FLRM---DVAPNAATFVSILGACGKLGCLNLGKGIHGLVSKYPHGKELVVSNTLMDMYVK 329
Query: 335 CGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGY 394
C + DA++LF+ + ++D+ SW++MISG
Sbjct: 330 CESVT-------------------------------DAKRLFDEIPEKDIVSWTSMISGL 358
Query: 395 AQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLND 454
Q + P +L+LF+ M+ +G +P+ + + SV A AS G L GRW HEY+ ++ I +
Sbjct: 359 VQYQCPQESLDLFYEMLGSGFEPDGVILTSVLSACASLGLLDYGRWVHEYIDHSRIKWDV 418
Query: 455 NLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLE 514
++ ++IDMYAKCG I A ++F + + ++ WNA I GLA++G LK + L
Sbjct: 419 HIGTSLIDMYAKCGCIEMAQQMFNLLPSK--NIRTWNAYIGGLAINGHGQEALKQFGYLV 476
Query: 515 KRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKS-VYNVEPDLKHYGCMVDLLGRAGQ 573
+ + N ITF+ V S CCH+GLVD G YFK M S YN+ P L+HYGCMVDLL RA
Sbjct: 477 ESGTRPNEITFLAVFSACCHSGLVDEGRSYFKQMTSPPYNLSPWLEHYGCMVDLLCRAEL 536
Query: 574 LEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNI 633
+E+A E+I MPM DV I G LL+AS +GNVE+ K++ + VLLSN
Sbjct: 537 VEEAMELINKMPMPPDVQIIGALLSASSTYGNVELTPEMLKTVRNFECQESGVYVLLSNW 596
Query: 634 YADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
YA+ +W + S+R+ M++ G+ + PG S
Sbjct: 597 YANNKKWAEVRSVRRLMKEKGISKAPGSS 625
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 120/481 (24%), Positives = 205/481 (42%), Gaps = 99/481 (20%)
Query: 28 SALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTL 87
+ L+ C+ +++ +QIH+L K+ L + F+QNS +++Y+ CG A +FD
Sbjct: 189 AVLKSCARFSGIAEVKQIHTLAVKTDLWCDMFVQNSFVHVYSICGDTVGASKVFDFMPVR 248
Query: 88 DPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMR 147
D V+ +ISGY++ NDA +F +
Sbjct: 249 DVVSWTGLISGYMKAGLFNDAVALFLR--------------------------------- 275
Query: 148 ILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLV 207
+ V PN T S++ + LG + + +HGLV K +++S L++MY C S+
Sbjct: 276 -MDVAPNAATFVSILGACGKLGCLNLGKGIHGLVSKYPHGKELVVSNTLMDMYVKCESVT 334
Query: 208 EARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVER 267
+A+ LFDE+ E++IVSW +MI G +Q +
Sbjct: 335 DAKRLFDEIPEKDIVSWT-------------------------------SMISGLVQYQC 363
Query: 268 LSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQAT 327
E+L ++ ML G P+ V++ ++SAC G +H I + I +
Sbjct: 364 PQESLDLFYEMLGSGFEPDGVILTSVLSACASLGLLDYGRWVHEYIDHSRIKWDVHIGTS 423
Query: 328 IIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSW 387
+I YA CG I +A+ F L +I +WNA I G NG ++A + F
Sbjct: 424 LIDMYAKCGCIEMAQQMFNLLPSKNIRTWNAYIGGLAINGHGQEALKQF----------- 472
Query: 388 SAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLN 447
GY +V++G +PNEIT ++VF A SG + EGR + + +
Sbjct: 473 -----GY---------------LVESGTRPNEITFLAVFSACCHSGLVDEGRSYFKQMTS 512
Query: 448 NSITLNDNLS--AAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANL 505
L+ L ++D+ + + A E+ + V A++ + +G+ L
Sbjct: 513 PPYNLSPWLEHYGCMVDLLCRAELVEEAMELINKM-PMPPDVQIIGALLSASSTYGNVEL 571
Query: 506 T 506
T
Sbjct: 572 T 572
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 102/265 (38%), Gaps = 76/265 (28%)
Query: 26 LVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCS 85
L S L C++ + G+ +H I S ++ + I SLI++YAKCG I A+ MF
Sbjct: 386 LTSVLSACASLGLLDYGRWVHEYIDHSRIKWDVHIGTSLIDMYAKCGCIEMAQQMF---- 441
Query: 86 TLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRD 145
N++ S IR ++ + I G A N +EAL+ F
Sbjct: 442 -------NLLPSKNIR--------------------TWNAYIGGLAINGHGQEALKQFGY 474
Query: 146 MRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSS 205
+ G PNE+T +V S+ H G ++D
Sbjct: 475 LVESGTRPNEITFLAVFSACCHSG---------------LVD------------------ 501
Query: 206 LVEARSLFDEM--KERNIVSW----NVMLNGFAKAGLVELARELFERIP-SKDVVSWGTM 258
E RS F +M N+ W M++ +A LVE A EL ++P DV G +
Sbjct: 502 --EGRSYFKQMTSPPYNLSPWLEHYGCMVDLLCRAELVEEAMELINKMPMPPDVQIIGAL 559
Query: 259 IDG---YLQVERLSEALTMYRAMLC 280
+ Y VE E L R C
Sbjct: 560 LSASSTYGNVELTPEMLKTVRNFEC 584
>gi|449518887|ref|XP_004166467.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g35030, mitochondrial-like [Cucumis sativus]
Length = 649
Score = 302 bits (773), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 181/611 (29%), Positives = 320/611 (52%), Gaps = 55/611 (9%)
Query: 60 IQNSLIN-LYAKCGLISQAKSMFDSCSTLDPVA-CNIMISGYIRNDRLNDAREVFDKTPI 117
+ NS+++ ++ C ++ + S S VA N +I+ + ++ +AR+VF++ P
Sbjct: 35 LHNSILSSQFSTCQVVPKISSPVRDFSANSNVARSNWLITQLGKEGKIGEARQVFEEMPD 94
Query: 118 KCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRML 177
+ VS+T++I G+ + EA +F I N VT +++S
Sbjct: 95 RDVVSWTAVITGYIKCGMIEEAKTLFDRN---DAIKNVVTWTALVSG------------- 138
Query: 178 HGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLV 237
Y + + EAR LFD M +N++SWN M+ G+A+ G +
Sbjct: 139 ----------------------YVRWNRIEEARRLFDAMPVKNVISWNTMIEGYARKGWI 176
Query: 238 ELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISAC 297
+ A +LFE +P ++VVSW T+I ++Q R+ EA ++ M + M+ L S
Sbjct: 177 DQALDLFEXMPERNVVSWNTVITAFMQRRRVDEAQELFNRMPERDVISWTTMVAGL-SKN 235
Query: 298 GR---AMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIA 354
GR A + + + +++ T+I YA R++ A FE + ++
Sbjct: 236 GRIDDARLLFDKMPVRNVVS----------WNTMIIGYAQNMRLDEAFKLFEQMPERELS 285
Query: 355 SWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAG 414
SWN +I GFI+NG +E A F M ++V +W+A+ISG+ Q+ + AL++F M A
Sbjct: 286 SWNTMITGFIQNGKLERAVDFFYKMSNKNVVTWTAVISGHVQDGRSEEALKIFSEMQAAN 345
Query: 415 -VKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTA 473
VKPNE T VSV A + L EG+ H+ + ++ +A+I+MY+KCG + A
Sbjct: 346 NVKPNEGTFVSVLGACSKLAALCEGQQIHQIISKTVYQEVADVVSALINMYSKCGELELA 405
Query: 474 FEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCC 533
++F V WN +I A HG + + ++ +++ + +++T+I +LS C
Sbjct: 406 RKIFDDGSIGHRDVVSWNGMIAAYAHHGHGHKAISLFDEMQALGFRPDNVTYIALLSACS 465
Query: 534 HAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIW 593
HAGLVD G + F+++ +++ H+ C+VDL GRAG+L++A + I+ + +K +W
Sbjct: 466 HAGLVDEGLKLFENLVRDRSIKLREDHFTCLVDLFGRAGRLQEAFDFIKGLEVKPSASVW 525
Query: 594 GTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDC 653
LLA +HG++++G+ A+ L +P + + ++LSNIYA G+W +A +R +M+D
Sbjct: 526 AALLAGCNVHGHIDLGKLTAEKLLETEPENAGTYLVLSNIYASTGKWREAAGVRMKMKDK 585
Query: 654 GMKRLPGFSGV 664
G+K+ PG S +
Sbjct: 586 GLKKQPGCSWI 596
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 130/484 (26%), Positives = 230/484 (47%), Gaps = 44/484 (9%)
Query: 26 LVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCS 85
+VS + +I ++ +L ++ N +L++ Y + I +A+ +FD+
Sbjct: 97 VVSWTAVITGYIKCGMIEEAKTLFDRNDAIKNVVTWTALVSGYVRWNRIEEARRLFDAMP 156
Query: 86 TLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRD 145
+ ++ N MI GY R ++ A ++F+ P + VS+ ++I F Q EA E+F
Sbjct: 157 VKNVISWNTMIEGYARKGWIDQALDLFEXMPERNVVSWNTVITAFMQRRRVDEAQELFNR 216
Query: 146 MRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSS 205
M VI +A + + G I + R+L K+ + V +T ++ Y
Sbjct: 217 MPERDVISWTTMVAGLSKN----GRIDDARLLFD---KMPVRNVVSWNTMIIG-YAQNMR 268
Query: 206 LVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQV 265
L EA LF++M ER + SWN M+ GF + G +E A + F ++ +K+VV+W +I G++Q
Sbjct: 269 LDEAFKLFEQMPERELSSWNTMITGFIQNGKLERAVDFFYKMSNKNVVTWTAVISGHVQD 328
Query: 266 ERLSEALTMYRAM-LCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFI 324
R EAL ++ M + + PN+ V ++ AC + A EG QIH II K + +
Sbjct: 329 GRSEEALKIFSEMQAANNVKPNEGTFVSVLGACSKLAALCEGQQIHQIISKTVYQEVADV 388
Query: 325 QATIIHFYAACGRINLARLQFELGIKDH--IASWNALIAGFIRNGMIEDARQLFNNMQKR 382
+ +I+ Y+ CG + LAR F+ G H + SWN +IA + +G A LF+ MQ
Sbjct: 389 VSALINMYSKCGELELARKIFDDGSIGHRDVVSWNGMIAAYAHHGHGHKAISLFDEMQA- 447
Query: 383 DVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG-RWA 441
G +P+ +T +++ A + +G + EG +
Sbjct: 448 ------------------------------LGFRPDNVTYIALLSACSHAGLVDEGLKLF 477
Query: 442 HEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHG 501
V + SI L ++ ++D++ + G + AF+ F + S S W A++ G +HG
Sbjct: 478 ENLVRDRSIKLREDHFTCLVDLFGRAGRLQEAFD-FIKGLEVKPSASVWAALLAGCNVHG 536
Query: 502 DANL 505
+L
Sbjct: 537 HIDL 540
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 118/258 (45%), Gaps = 39/258 (15%)
Query: 8 SVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINL 67
+F+ +A E VS L CS A+ +GQQIH +I K+ + + ++LIN+
Sbjct: 336 KIFSEMQAANNVKPNEGTFVSVLGACSKLAALCEGQQIHQIISKTVYQEVADVVSALINM 395
Query: 68 YAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMI 127
Y+KCG + A+ +FD S G+ R+V VS+ MI
Sbjct: 396 YSKCGELELARKIFDDGSI-----------GH---------RDV---------VSWNGMI 426
Query: 128 MGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWE-CRMLHGLV----I 182
+A + +A+ +F +M+ LG P+ VT +++S+ H G + E ++ LV I
Sbjct: 427 AAYAHHGHGHKAISLFDEMQALGFRPDNVTYIALLSACSHAGLVDEGLKLFENLVRDRSI 486
Query: 183 KLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVS-WNVMLNGFAKAGLVELAR 241
KL D F T L++++ L EA ++ + S W +L G G ++L +
Sbjct: 487 KLREDHF----TCLVDLFGRAGRLQEAFDFIKGLEVKPSASVWAALLAGCNVHGHIDLGK 542
Query: 242 ELFERIPSKDVVSWGTMI 259
E++ + + GT +
Sbjct: 543 LTAEKLLETEPENAGTYL 560
>gi|347954496|gb|AEP33748.1| chloroplast biogenesis 19, partial [Capsella bursa-pastoris]
Length = 489
Score = 301 bits (772), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 155/420 (36%), Positives = 249/420 (59%), Gaps = 6/420 (1%)
Query: 249 SKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQ 308
S+ +VSW + I + RL+EA + M G+ PN + + L+S CG + E L
Sbjct: 22 SETIVSWTSRITLLTRNGRLAEAAKEFSDMRLAGVEPNHITFIALLSGCGDFSSGSEALG 81
Query: 309 --IHSIIVKAGFD-CYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIR 365
+H K G D + + I+ Y+ R+ ARL F+ + +WN +I G++R
Sbjct: 82 DLLHGYACKLGHDRTHVMVGTAILGMYSKHSRVKKARLVFDYMEDKNSVTWNTMIDGYMR 141
Query: 366 NGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSV 425
NG +++A ++F+ M +RD+ SW+AMI+G+ + AL F M +GVKP+ + +++
Sbjct: 142 NGQVDNAVKMFDKMPERDLISWTAMINGFVKKGFHEEALAWFREMQISGVKPDYVAIIAA 201
Query: 426 FCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTT 485
A + G L G W H YV++ N +S ++ID+Y +CG + A EVF + RT
Sbjct: 202 LNACTNLGALSFGLWVHRYVMSQDFKNNVKVSNSLIDLYCRCGCVEFAREVFDKMEKRT- 260
Query: 486 SVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYF 545
V WN++I G A +G+A+ +L + +++ K +++TF G L+ C H GLV+ G RYF
Sbjct: 261 -VVSWNSVIVGFAANGNAHESLVYFRKMQEEGFKPDAVTFTGALTACSHVGLVEEGLRYF 319
Query: 546 KSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGN 605
++MK + + P ++HYGC+VDL RAG+LE+A +V++SMPMK + V+ G+LLAA R HGN
Sbjct: 320 QTMKRDHRISPRIEHYGCLVDLYSRAGRLEEALKVVQSMPMKPNEVVIGSLLAACRTHGN 379
Query: 606 VEV-GERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
V ER K L+ + + V+LSN+YA G+WE A +R++M+ G+K+ PGFS +
Sbjct: 380 NTVLAERLMKHLSDVNVKGHSNYVILSNMYAADGKWEGASQMRRKMKGLGLKKQPGFSSI 439
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 105/385 (27%), Positives = 184/385 (47%), Gaps = 35/385 (9%)
Query: 96 ISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNE 155
+S R + + +++ + VS+TS I +N EA + F DMR+ GV PN
Sbjct: 1 VSFITRKHHADPKIQKLNQSTSETIVSWTSRITLLTRNGRLAEAAKEFSDMRLAGVEPNH 60
Query: 156 VTLASVISSSVHLGGIWEC--RMLHGLVIKLMID-GFVIISTNLLNMYCVCSSLVEARSL 212
+T +++S E +LHG KL D V++ T +L MY S + +AR +
Sbjct: 61 ITFIALLSGCGDFSSGSEALGDLLHGYACKLGHDRTHVMVGTAILGMYSKHSRVKKARLV 120
Query: 213 FDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEAL 272
FD M+++N V+WN M++G+ + G V+ A ++F+++P +D++SW MI+G+++ EAL
Sbjct: 121 FDYMEDKNSVTWNTMIDGYMRNGQVDNAVKMFDKMPERDLISWTAMINGFVKKGFHEEAL 180
Query: 273 TMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFY 332
+R M G+ P+ V I+ ++AC A GL +H ++ F + ++I Y
Sbjct: 181 AWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVMSQDFKNNVKVSNSLIDLY 240
Query: 333 AACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMIS 392
CG + AR F+ K + SWN++I GF NG ++ F MQ
Sbjct: 241 CRCGCVEFAREVFDKMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQ------------ 288
Query: 393 GYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG-RWAHEYVLNNSIT 451
+ G KP+ +T A + G ++EG R+ ++ I+
Sbjct: 289 -------------------EEGFKPDAVTFTGALTACSHVGLVEEGLRYFQTMKRDHRIS 329
Query: 452 LNDNLSAAIIDMYAKCGSINTAFEV 476
++D+Y++ G + A +V
Sbjct: 330 PRIEHYGCLVDLYSRAGRLEEALKV 354
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/317 (28%), Positives = 157/317 (49%), Gaps = 55/317 (17%)
Query: 42 GQQIHSLIFKSGLE-SNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYI 100
G +H K G + ++ + +++ +Y+K + +A+ +FD + V N MI GY+
Sbjct: 81 GDLLHGYACKLGHDRTHVMVGTAILGMYSKHSRVKKARLVFDYMEDKNSVTWNTMIDGYM 140
Query: 101 RNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLAS 160
RN ++++A ++FDK P + +S+T+MI GF + EAL FR+M+I GV P+ V + +
Sbjct: 141 RNGQVDNAVKMFDKMPERDLISWTAMINGFVKKGFHEEALAWFREMQISGVKPDYVAIIA 200
Query: 161 VISSSVHLG----GIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEM 216
+++ +LG G+W +H V+ V +S +L+++YC C + AR +FD+M
Sbjct: 201 ALNACTNLGALSFGLW----VHRYVMSQDFKNNVKVSNSLIDLYCRCGCVEFAREVFDKM 256
Query: 217 KERNIVSWNVMLNGFA-----------------------------------KAGLVELAR 241
++R +VSWN ++ GFA GLVE
Sbjct: 257 EKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEEGFKPDAVTFTGALTACSHVGLVEEGL 316
Query: 242 ELFERIPSKDVVS-----WGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISA 296
F+ + +S +G ++D Y + RL EAL + ++M + PN+V+I L++A
Sbjct: 317 RYFQTMKRDHRISPRIEHYGCLVDLYSRAGRLEEALKVVQSM---PMKPNEVVIGSLLAA 373
Query: 297 C---GRAMAFGEGLQIH 310
C G E L H
Sbjct: 374 CRTHGNNTVLAERLMKH 390
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 112/270 (41%), Gaps = 46/270 (17%)
Query: 374 QLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVF--CAIAS 431
Q N + SW++ I+ +N + A + F M AGV+PN IT +++ C S
Sbjct: 15 QKLNQSTSETIVSWTSRITLLTRNGRLAEAAKEFSDMRLAGVEPNHITFIALLSGCGDFS 74
Query: 432 SGTLKEGRWAHEYV--LNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSP 489
SG+ G H Y L + T + + AI+ MY+K + A VF ++ D+ +
Sbjct: 75 SGSEALGDLLHGYACKLGHDRT-HVMVGTAILGMYSKHSRVKKARLVFDYMEDKNSVT-- 131
Query: 490 WNAIICGLAMHGDANLTLKIYSDLEKRN-------------------------------I 518
WN +I G +G + +K++ + +R+ +
Sbjct: 132 WNTMIDGYMRNGQVDNAVKMFDKMPERDLISWTAMINGFVKKGFHEEALAWFREMQISGV 191
Query: 519 KLNSITFIGVLSTCCHAGLVDLG---ERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLE 575
K + + I L+ C + G + G RY S NV K ++DL R G +E
Sbjct: 192 KPDYVAIIAALNACTNLGALSFGLWVHRYVMSQDFKNNV----KVSNSLIDLYCRCGCVE 247
Query: 576 DAEEVIRSMPMKADVVIWGTLLAASRIHGN 605
A EV M K VV W +++ +GN
Sbjct: 248 FAREVFDKME-KRTVVSWNSVIVGFAANGN 276
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 71/153 (46%), Gaps = 32/153 (20%)
Query: 21 DYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSM 80
DY +A+++AL C+ A+S G +H + ++N + NSLI+LY +CG + A+ +
Sbjct: 194 DY-VAIIAALNACTNLGALSFGLWVHRYVMSQDFKNNVKVSNSLIDLYCRCGCVEFAREV 252
Query: 81 FDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREAL 140
F DK + VS+ S+I+GFA N E+L
Sbjct: 253 F-------------------------------DKMEKRTVVSWNSVIVGFAANGNAHESL 281
Query: 141 EVFRDMRILGVIPNEVTLASVISSSVHLGGIWE 173
FR M+ G P+ VT +++ H+G + E
Sbjct: 282 VYFRKMQEEGFKPDAVTFTGALTACSHVGLVEE 314
>gi|356577724|ref|XP_003556973.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g56310-like [Glycine max]
Length = 549
Score = 301 bits (772), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 166/474 (35%), Positives = 265/474 (55%), Gaps = 11/474 (2%)
Query: 199 MYCVCSSLVEARSLFDEMKERNIVSWNVMLNGF----AKAGLVELARELFERIPSKDVVS 254
+ C C++L + M R + +++L F A GL A +F +
Sbjct: 36 LLCHCTNLSHLQQTQGFMLTRGLDQDDILLARFIYTSASLGLSSYAYSVFISNHRPSIFF 95
Query: 255 WGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIV 314
+ +I L + A++++ A+ G+ P+ ++ A A G QIH +
Sbjct: 96 YNNVIWA-LSSSNPTRAISLFNAIRLLGMPPDSYSFPFVLKAVVCLSAVHVGKQIHCQAI 154
Query: 315 KAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQ 374
+G D + + +++ Y++C ++ AR F+ H WNA++AG+ + G + +AR
Sbjct: 155 VSGLDSHPSVVTSLVQMYSSCAHLSSARKLFDGATFKHAPLWNAMLAGYAKVGNMSNARN 214
Query: 375 LFNNM--QKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASS 432
LF M + RDV SW+ +ISGY Q PN A+ LF M+ V+P+EI +++V A A
Sbjct: 215 LFECMPEKDRDVVSWTTLISGYTQTHSPNEAITLFRIMLLQNVQPDEIAILAVLSACADL 274
Query: 433 GTLKEGRWAHEYV--LNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPW 490
G L+ G W H Y+ NN + L ++IDMYAK G I+ A ++F +++ +T + W
Sbjct: 275 GALQLGEWIHNYIEKHNNKLRKTVPLCNSLIDMYAKSGDISKARQLFQNMKHKT--IITW 332
Query: 491 NAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKS 550
+I GLA+HG L ++S +EK +K N +T I VLS C H GLV+LG F SM+S
Sbjct: 333 TTVISGLALHGFGKEALDVFSCMEKARVKPNEVTLIAVLSACSHVGLVELGRNIFTSMRS 392
Query: 551 VYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGE 610
Y +EP ++HYGCM+DLLGRAG L++A E++R MP +A+ +WG+LL+AS +G+ +
Sbjct: 393 KYGIEPKIEHYGCMIDLLGRAGYLQEAMELVRVMPSEANAAVWGSLLSASNRYGDAALAA 452
Query: 611 RAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
A + L+ L+P + + LLSN YA G W++A +RK MRD +++PG S V
Sbjct: 453 EALRHLSVLEPHNCGNYSLLSNTYAALGWWKEAAMVRKVMRDTCAEKVPGVSFV 506
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 133/485 (27%), Positives = 218/485 (44%), Gaps = 68/485 (14%)
Query: 39 VSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISG 98
+S QQ + GL+ + + I A GL S A S+F S
Sbjct: 43 LSHLQQTQGFMLTRGLDQDDILLARFIYTSASLGLSSYAYSVFIS--------------- 87
Query: 99 YIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTL 158
N +F Y ++I + ++ R A+ +F +R+LG+ P+ +
Sbjct: 88 -------NHRPSIF---------FYNNVIWALSSSNPTR-AISLFNAIRLLGMPPDSYSF 130
Query: 159 ASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKE 218
V+ + V L + + +H I +D + T+L+ MY C+ L AR LFD
Sbjct: 131 PFVLKAVVCLSAVHVGKQIHCQAIVSGLDSHPSVVTSLVQMYSSCAHLSSARKLFDGATF 190
Query: 219 RNIVSWNVMLNGFAKAGLVELARELFERIPSK--DVVSWGTMIDGYLQVERLSEALTMYR 276
++ WN ML G+AK G + AR LFE +P K DVVSW T+I GY Q +EA+T++R
Sbjct: 191 KHAPLWNAMLAGYAKVGNMSNARNLFECMPEKDRDVVSWTTLISGYTQTHSPNEAITLFR 250
Query: 277 AMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACG 336
ML + P+++ I+ ++SAC A G IH+ I K
Sbjct: 251 IMLLQNVQPDEIAILAVLSACADLGALQLGEWIHNYIEKHNNK----------------- 293
Query: 337 RINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQ 396
++ + N+LI + ++G I ARQLF NM+ + + +W+ +ISG A
Sbjct: 294 ------------LRKTVPLCNSLIDMYAKSGDISKARQLFQNMKHKTIITWTTVISGLAL 341
Query: 397 NEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNN-SITLNDN 455
+ AL++F M A VKPNE+T+++V A + G ++ GR + + I
Sbjct: 342 HGFGKEALDVFSCMEKARVKPNEVTLIAVLSACSHVGLVELGRNIFTSMRSKYGIEPKIE 401
Query: 456 LSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANL---TLKIYSD 512
+ID+ + G + A E+ + + + W +++ +GDA L L+ S
Sbjct: 402 HYGCMIDLLGRAGYLQEAMELV-RVMPSEANAAVWGSLLSASNRYGDAALAAEALRHLSV 460
Query: 513 LEKRN 517
LE N
Sbjct: 461 LEPHN 465
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 94/346 (27%), Positives = 156/346 (45%), Gaps = 54/346 (15%)
Query: 38 AVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMIS 97
AV G+QIH SGL+S+ + SL+ +Y+ C +S A+ +FD + N M++
Sbjct: 142 AVHVGKQIHCQAIVSGLDSHPSVVTSLVQMYSSCAHLSSARKLFDGATFKHAPLWNAMLA 201
Query: 98 GYIRNDRLNDAREVFDKTPIK--CCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNE 155
GY + +++AR +F+ P K VS+T++I G+ Q EA+ +FR M + V P+E
Sbjct: 202 GYAKVGNMSNARNLFECMPEKDRDVVSWTTLISGYTQTHSPNEAITLFRIMLLQNVQPDE 261
Query: 156 VTLASVISSSVHLGGIWECRMLHGLVIKL--MIDGFVIISTNLLNMYCVCSSLVEARSLF 213
+ + +V+S+ LG + +H + K + V + +L++MY + +AR LF
Sbjct: 262 IAILAVLSACADLGALQLGEWIHNYIEKHNNKLRKTVPLCNSLIDMYAKSGDISKARQLF 321
Query: 214 DEMKERNIVSWNVMLNGFA-----------------------------------KAGLVE 238
MK + I++W +++G A GLVE
Sbjct: 322 QNMKHKTIITWTTVISGLALHGFGKEALDVFSCMEKARVKPNEVTLIAVLSACSHVGLVE 381
Query: 239 LARELFERIPSK-----DVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDL 293
L R +F + SK + +G MID + L EA+ + R M + N + L
Sbjct: 382 LGRNIFTSMRSKYGIEPKIEHYGCMIDLLGRAGYLQEAMELVRVMPSEA---NAAVWGSL 438
Query: 294 ISACGR---AMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACG 336
+SA R A E L+ S++ Y + T YAA G
Sbjct: 439 LSASNRYGDAALAAEALRHLSVLEPHNCGNYSLLSNT----YAALG 480
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 106/248 (42%), Gaps = 76/248 (30%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFK--SGLESNTFIQNSLINLYAKCGLISQAKSM 80
E+A+++ L C+ A+ G+ IH+ I K + L + NSLI++YAK G IS+
Sbjct: 261 EIAILAVLSACADLGALQLGEWIHNYIEKHNNKLRKTVPLCNSLIDMYAKSGDISK---- 316
Query: 81 FDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREAL 140
AR++F K +++T++I G A + +EAL
Sbjct: 317 ---------------------------ARQLFQNMKHKTIITWTTVISGLALHGFGKEAL 349
Query: 141 EVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMY 200
+VF M V PNEVTL +V+S+ H+G
Sbjct: 350 DVFSCMEKARVKPNEVTLIAVLSACSHVG------------------------------- 378
Query: 201 CVCSSLVE-ARSLFDEMK-----ERNIVSWNVMLNGFAKAGLVELARELFERIPSK-DVV 253
LVE R++F M+ E I + M++ +AG ++ A EL +PS+ +
Sbjct: 379 -----LVELGRNIFTSMRSKYGIEPKIEHYGCMIDLLGRAGYLQEAMELVRVMPSEANAA 433
Query: 254 SWGTMIDG 261
WG+++
Sbjct: 434 VWGSLLSA 441
>gi|225433310|ref|XP_002282466.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Vitis vinifera]
Length = 625
Score = 301 bits (772), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 187/646 (28%), Positives = 321/646 (49%), Gaps = 89/646 (13%)
Query: 21 DYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSM 80
D LAL+ +L + H ++ +Q HS I GL N+ + LI YA C
Sbjct: 21 DPSLALLQSLHFSVTHKSLKLTRQSHSRILSLGLSQNSLLATKLIFAYAIC--------- 71
Query: 81 FDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREAL 140
+R VFD K + S+I G+A+N + EA
Sbjct: 72 ----------------------QHPYHSRLVFDSLQHKNVFLWNSLINGYAKNRLYNEAF 109
Query: 141 EVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMY 200
++F M V+P++ TL+++ S LG ++ + +HG I++ +++ ++++MY
Sbjct: 110 QLFNQMCSSDVLPDDFTLSTLSKVSSELGALFSGKSIHGKSIRIGFVSDTVVANSIMSMY 169
Query: 201 CVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMID 260
C C + E+R +FDEM RN SWNV++ G+A +G E +E +
Sbjct: 170 CKCGNFEESRKVFDEMTIRNSGSWNVLIAGYAVSGNCNFREETWEFV------------- 216
Query: 261 GYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISAC-GRAMAFGEGLQIHSIIVKAGFD 319
+ M D + P+ I L+ C G + G ++H IVK
Sbjct: 217 ---------------KQMQMDEVRPDAYTISSLLPLCDGDKGKWDYGRELHCYIVKN--- 258
Query: 320 CYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNM 379
+ LG+ + LI + R+ + R++F+ M
Sbjct: 259 ------------------------ELVLGLDSDVHLGCCLIDMYSRSNKVVVGRRVFDRM 294
Query: 380 QKRDVYSWSAMISGYAQNEQPNMALELFHGM-VDAGVKPNEITMVSVFCAIASSGTLKEG 438
+ R+V+SW+AMI+GY +N + AL LF M V G++PN +++VSV A +S L G
Sbjct: 295 KCRNVFSWTAMINGYVENGDSDEALSLFRDMQVIDGIEPNRVSLVSVLPACSSFSGLLSG 354
Query: 439 RWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLA 498
R H + + + +L A+IDMY+KCGS+++A VF ++S W+++I G
Sbjct: 355 RQIHGFAVRKELNNEVSLCNALIDMYSKCGSLDSARRVFEDDSLCKDAIS-WSSMISGYG 413
Query: 499 MHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDL 558
+HG + +Y + + I+ + IT +G+LS C +GLV+ G + S+ + Y +EP L
Sbjct: 414 LHGKGQEAILLYDKMLQAGIRPDMITTVGILSACSRSGLVNEGLNIYSSVINDYGIEPTL 473
Query: 559 KHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAG 618
+ + C+VD+LGRAGQL+ A + I++MP++ +WG L++ S IHG++E+ E A + L
Sbjct: 474 EIFACIVDMLGRAGQLDPALDFIKAMPVEPGPSVWGALVSCSIIHGDLEMQELAYRFLIQ 533
Query: 619 LQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
L+P + + V +SN+YA + RW+ +R+ M+D ++++PG S +
Sbjct: 534 LEPENPSNYVSISNLYASSRRWDAVAEVRRMMKDKRLRKVPGCSWI 579
>gi|297739965|emb|CBI30147.3| unnamed protein product [Vitis vinifera]
Length = 538
Score = 301 bits (772), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 158/410 (38%), Positives = 241/410 (58%), Gaps = 37/410 (9%)
Query: 255 WGTMIDGYLQVERLSEALTMYRAMLCDGIAP-NDVMIVDLISACGRAMAFGEGLQIHSII 313
W TMI GY + + EA+ +Y +M+ GIAP N+ L+++C R + G ++HS I
Sbjct: 2 WNTMIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEPGHEVHSHI 61
Query: 314 VKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDAR 373
+K GF+ F++ +IH Y+ G +NLAR
Sbjct: 62 IKHGFESDLFVRNALIHLYSVFGNLNLAR------------------------------- 90
Query: 374 QLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSG 433
LF+ RD+ S++ MI GYA+ QP AL LF M ++ +E+T+V+V A A G
Sbjct: 91 TLFDESLVRDLVSYNTMIKGYAEVNQPESALCLFGEMQNS----DEVTLVAVLSACARLG 146
Query: 434 TLKEG-RWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNA 492
G R H+Y+ N N L+AA++DMYAKCGSI++A E+F + + +N+
Sbjct: 147 AFDLGKRLYHQYIENGVFNQNTILTAAVMDMYAKCGSIDSALEIFRRVGKNMKTGFVFNS 206
Query: 493 IICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVY 552
+I GLA HG + ++ +L +K + +TF+GVL C H+GL++ G++ F+SM + Y
Sbjct: 207 MIAGLAQHGLGETAITVFRELISTGLKPDEVTFVGVLCACGHSGLIEEGKKLFESMFNAY 266
Query: 553 NVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERA 612
++P ++HYGCMVDLLGR G LE+A ++++ MP +A+ VIW LL+A R HGNV++GE A
Sbjct: 267 GIKPQMEHYGCMVDLLGRYGCLEEAYDLVQKMPFEANSVIWRALLSACRTHGNVKIGEIA 326
Query: 613 AKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
+ L ++ HG VLLSNI ADA +WE+A +RK M D G+++ PG+S
Sbjct: 327 GQKLLEMEAQHGARYVLLSNILADANQWEEARQVRKVMEDHGIRKPPGWS 376
Score = 118 bits (296), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 95/386 (24%), Positives = 171/386 (44%), Gaps = 68/386 (17%)
Query: 123 YTSMIMGFAQNDCWREALEVFRDMRILGVIP-NEVTLASVISSSVHLGGIWECRMLHGLV 181
+ +MI G++++D REA+ ++ M G+ P N T +++S L + +H +
Sbjct: 2 WNTMIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEPGHEVHSHI 61
Query: 182 IKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELAR 241
IK + + + L+++Y V +L AR+LFDE R++VS+N M+ G+A+ E A
Sbjct: 62 IKHGFESDLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNTMIKGYAEVNQPESAL 121
Query: 242 ELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAM 301
LF + + D +V +V ++SAC R
Sbjct: 122 CLFGEMQNSD-----------------------------------EVTLVAVLSACARLG 146
Query: 302 AFGEGLQI-HSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALI 360
AF G ++ H I F+ + A ++ YA CG I+ A
Sbjct: 147 AFDLGKRLYHQYIENGVFNQNTILTAAVMDMYAKCGSIDSA------------------- 187
Query: 361 AGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEI 420
+E R++ NM+ V+ ++MI+G AQ+ A+ +F ++ G+KP+E+
Sbjct: 188 --------LEIFRRVGKNMKTGFVF--NSMIAGLAQHGLGETAITVFRELISTGLKPDEV 237
Query: 421 TMVSVFCAIASSGTLKEGRWAHEYVLNN-SITLNDNLSAAIIDMYAKCGSINTAFEVFYH 479
T V V CA SG ++EG+ E + N I ++D+ + G + A+++
Sbjct: 238 TFVGVLCACGHSGLIEEGKKLFESMFNAYGIKPQMEHYGCMVDLLGRYGCLEEAYDLVQK 297
Query: 480 IRDRTTSVSPWNAIICGLAMHGDANL 505
+ SV W A++ HG+ +
Sbjct: 298 MPFEANSVI-WRALLSACRTHGNVKI 322
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/368 (22%), Positives = 149/368 (40%), Gaps = 100/368 (27%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
L C+ ++ G ++HS I K G ES+ F++N+LI+LY+ G ++ A+++FD D
Sbjct: 42 LNSCARLSSLEPGHEVHSHIIKHGFESDLFVRNALIHLYSVFGNLNLARTLFDESLVRDL 101
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
V+ N MI GY ++ A +F G QN
Sbjct: 102 VSYNTMIKGYAEVNQPESALCLF----------------GEMQNS--------------- 130
Query: 150 GVIPNEVTLASVISSSVHLGGI-WECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVE 208
+EVTL +V+S+ LG R+ H + + + I++ +++MY C S+
Sbjct: 131 ----DEVTLVAVLSACARLGAFDLGKRLYHQYIENGVFNQNTILTAAVMDMYAKCGSIDS 186
Query: 209 ARSLFDEMKE--RNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVE 266
A +F + + + +N M+ G A+ GL E
Sbjct: 187 ALEIFRRVGKNMKTGFVFNSMIAGLAQHGLGE---------------------------- 218
Query: 267 RLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQA 326
A+T++R ++ G+ P++V V ++ ACG + EG + + ++ F+ Y
Sbjct: 219 ---TAITVFRELISTGLKPDEVTFVGVLCACGHSGLIEEGKK----LFESMFNAY----- 266
Query: 327 TIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ-KRDVY 385
GIK + + ++ R G +E+A L M + +
Sbjct: 267 ---------------------GIKPQMEHYGCMVDLLGRYGCLEEAYDLVQKMPFEANSV 305
Query: 386 SWSAMISG 393
W A++S
Sbjct: 306 IWRALLSA 313
>gi|296090147|emb|CBI39966.3| unnamed protein product [Vitis vinifera]
Length = 726
Score = 301 bits (772), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 179/633 (28%), Positives = 315/633 (49%), Gaps = 59/633 (9%)
Query: 31 RYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPV 90
R ++ +Q ++HSLI GL + LI YA + + S+F S + V
Sbjct: 21 RALASAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLASPSNNV 80
Query: 91 ACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILG 150
Y+ N S+I N + EAL ++ + + +
Sbjct: 81 --------YLWN----------------------SIIRALTHNGLFSEALSLYSETQRIR 110
Query: 151 VIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEAR 210
+ P+ T SVI++ L + +H V+ + + I L++MYC + L +AR
Sbjct: 111 LQPDTYTFPSVINACAGLLDFEMAKSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKAR 170
Query: 211 SLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSE 270
+F+EM R++VSWN +++G+ G A E++ Y ++ E
Sbjct: 171 KVFEEMPLRDVVSWNSLISGYNANGYWNEALEIY-----------------YQSIKLFME 213
Query: 271 ALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIH 330
+ ++ P+ + I ++ ACG G +H ++ +G++C +I+
Sbjct: 214 MVNQFK--------PDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILIN 265
Query: 331 FYAACGRINLARLQFE-LGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSA 389
YA CG + ++ F + KD + SWN++I +I+NG + D+ ++F NM+ RD+ +W+
Sbjct: 266 MYAKCGNLLASQEVFSGMKCKDSV-SWNSMINVYIQNGKMGDSLKVFENMKARDIITWNT 324
Query: 390 MISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNS 449
+I+ +E N+ L + M GV P+ TM+S+ + ++G+ H +
Sbjct: 325 IIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLG 384
Query: 450 ITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKI 509
+ + + +I+MY+KCGS+ +F+VF + +T V W A+I M+G+ ++
Sbjct: 385 LESDVPVGNVLIEMYSKCGSLRNSFQVFKLM--KTKDVVTWTALISACGMYGEGKKAVRA 442
Query: 510 YSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLG 569
+ ++E I + + F+ ++ C H+GLV+ G YF MK Y +EP ++HY C+VDLL
Sbjct: 443 FGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLS 502
Query: 570 RAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVL 629
R+ L+ AE+ I SMP+K D IWG LL+A R+ G+ E+ ER ++ + L P VL
Sbjct: 503 RSALLDKAEDFILSMPLKPDSSIWGALLSACRMSGDTEIAERVSERIIELNPDDTGYYVL 562
Query: 630 LSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
+SNIYA G+W+ SIRK ++ G+K+ PG S
Sbjct: 563 VSNIYAALGKWDQVRSIRKSIKARGLKKDPGCS 595
Score = 162 bits (410), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 118/511 (23%), Positives = 232/511 (45%), Gaps = 64/511 (12%)
Query: 12 SQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKC 71
+Q+ LQ Y S + C+ + + IH + G S+ +I N+LI++Y +
Sbjct: 106 TQRIRLQPDTYTFP--SVINACAGLLDFEMAKSIHDRVLDMGFGSDLYIGNALIDMYCRF 163
Query: 72 GLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFA 131
+ +A+ +F+ D V+ N +ISGY N N+A E++
Sbjct: 164 NDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIY------------------- 204
Query: 132 QNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVI 191
+++++F +M + P+ +T+ S++ + HLG + + +H +I +
Sbjct: 205 -----YQSIKLFMEM-VNQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTT 258
Query: 192 ISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKD 251
S L+NMY C +L+ ++ +F MK ++ VSWN M+N + + G + + ++FE + ++D
Sbjct: 259 ASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGKMGDSLKVFENMKARD 318
Query: 252 VVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHS 311
+++W T+I + E + L M M +G+ P+ ++ ++ C A +G +IH
Sbjct: 319 IITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHG 378
Query: 312 IIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIED 371
I K G + + +I Y+ CG +RN
Sbjct: 379 CIFKLGLESDVPVGNVLIEMYSKCGS--------------------------LRNSF--- 409
Query: 372 ARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIAS 431
Q+F M+ +DV +W+A+IS + A+ F M AG+ P+ + V++ A +
Sbjct: 410 --QVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSH 467
Query: 432 SGTLKEG-RWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPW 490
SG ++EG + H + I A ++D+ ++ ++ A + + + S S W
Sbjct: 468 SGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPLKPDS-SIW 526
Query: 491 NAIICGLAMHGDANLTLKIYSDLEKRNIKLN 521
A++ M GD + ++ +R I+LN
Sbjct: 527 GALLSACRMSGDTEIAERV----SERIIELN 553
>gi|326526103|dbj|BAJ93228.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 623
Score = 301 bits (772), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 178/565 (31%), Positives = 296/565 (52%), Gaps = 55/565 (9%)
Query: 104 RLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFR--DMRILGVIPNEVTLASV 161
R+ DAR +FD+TP + VS+T+M+ +A+ EA + D R N VT ++
Sbjct: 54 RVPDARRLFDRTPDRDVVSWTAMVAAYARQGQLHEASALLHRPDAR-----RNVVTWTAL 108
Query: 162 ISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNI 221
+S + E R L M + V+ +L Y + A +LFD M R+
Sbjct: 109 LSGYARARRVDEARAL----FDRMPERNVVSWNTMLEAYASAGRMGAACALFDGMPVRDA 164
Query: 222 VSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCD 281
SWN++L ++G ++ AR LFER+P ++V+SW TMI G + EA ++ D
Sbjct: 165 GSWNILLAALVRSGTMDEARRLFERMPERNVMSWTTMISGLARSGSADEARALF-----D 219
Query: 282 GIAPNDVMIVD-LISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINL 340
G+ +V+ + +IS R + E L + +N+
Sbjct: 220 GMPERNVVSWNAMISGYARNLRIDEALDLF---------------------------MNM 252
Query: 341 ARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQP 400
+ +ASWN +I GFI+N ++ A++LF+ M KR+V SW+ M++G Q +
Sbjct: 253 P--------ERDVASWNIMITGFIQNKDLKKAQELFDEMPKRNVVSWTTMMNGCLQGNES 304
Query: 401 NMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAI 460
MAL++F+GM+ G++PN++T + A ++ L EG+ H+ + ++ + +++
Sbjct: 305 EMALQVFNGMLVDGIRPNQVTFLGAVDAGSNLAGLSEGQQVHQMICKTPFQFDNFIESSL 364
Query: 461 IDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKL 520
+ +YAKCG I A +VF ++ V WN +I A HG + +Y +++ K
Sbjct: 365 MKLYAKCGEIRLARKVFDLSGEK--DVISWNGMIAAYAHHGAGVEAIALYEKMQENRYKP 422
Query: 521 NSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEV 580
N +T++G+LS C H+GLVD G R F+ M ++ +HY C++DL RAG+L+DA+ +
Sbjct: 423 NDVTYVGLLSACSHSGLVDEGLRIFEYMAKDKSIAVRDEHYSCLIDLCSRAGRLDDAKRL 482
Query: 581 IRSMPMK-ADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGR 639
I + +K +W LL HGN +G+ AA++L +P + + LLSNIYA AG+
Sbjct: 483 INGLKLKPTSSTVWSALLGGCNAHGNESIGDLAARNLLEAEPDNAGTYTLLSNIYASAGK 542
Query: 640 WEDAFSIRKEMRDCGMKRLPGFSGV 664
W++A IR EM D G+K+ PG S +
Sbjct: 543 WKEAAKIRSEMNDRGLKKQPGCSWI 567
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 132/471 (28%), Positives = 222/471 (47%), Gaps = 76/471 (16%)
Query: 49 IFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDA 108
+F E N N+++ YA G + A ++FD D + NI+++ +R+ +++A
Sbjct: 124 LFDRMPERNVVSWNTMLEAYASAGRMGAACALFDGMPVRDAGSWNILLAALVRSGTMDEA 183
Query: 109 REVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHL 168
R +F++ P + +S+T+MI G A++ EA +F M V+
Sbjct: 184 RRLFERMPERNVMSWTTMISGLARSGSADEARALFDGMPERNVVS--------------- 228
Query: 169 GGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVML 228
W M+ G L ID EA LF M ER++ SWN+M+
Sbjct: 229 ---WNA-MISGYARNLRID--------------------EALDLFMNMPERDVASWNIMI 264
Query: 229 NGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDV 288
GF + ++ A+ELF+ +P ++VVSW TM++G LQ AL ++ ML DGI PN V
Sbjct: 265 TGFIQNKDLKKAQELFDEMPKRNVVSWTTMMNGCLQGNESEMALQVFNGMLVDGIRPNQV 324
Query: 289 MIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELG 348
+ + A EG Q+H +I K F +FI+++++ YA CG I LAR F+L
Sbjct: 325 TFLGAVDAGSNLAGLSEGQQVHQMICKTPFQFDNFIESSLMKLYAKCGEIRLARKVFDLS 384
Query: 349 IKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFH 408
+ + SWN +IA + +G +A L+ MQ+
Sbjct: 385 GEKDVISWNGMIAAYAHHGAGVEAIALYEKMQENR------------------------- 419
Query: 409 GMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVL-NNSITLNDNLSAAIIDMYAKC 467
KPN++T V + A + SG + EG EY+ + SI + D + +ID+ ++
Sbjct: 420 ------YKPNDVTYVGLLSACSHSGLVDEGLRIFEYMAKDKSIAVRDEHYSCLIDLCSRA 473
Query: 468 GSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNI 518
G ++ A + ++ + TS + W+A++ G HG+ ++ DL RN+
Sbjct: 474 GRLDDAKRLINGLKLKPTSSTVWSALLGGCNAHGNESI-----GDLAARNL 519
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 104/384 (27%), Positives = 184/384 (47%), Gaps = 27/384 (7%)
Query: 225 NVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIA 284
N + A AG V AR LF+R P +DVVSW M+ Y + +L EA A+L A
Sbjct: 43 NRRIAELAAAGRVPDARRLFDRTPDRDVVSWTAMVAAYARQGQLHEA----SALLHRPDA 98
Query: 285 PNDVMI-VDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARL 343
+V+ L+S RA E + + + ++ T++ YA+ GR+ A
Sbjct: 99 RRNVVTWTALLSGYARARRVDEARALFDRMPERNVVSWN----TMLEAYASAGRMGAACA 154
Query: 344 QFE-LGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNM 402
F+ + ++D SWN L+A +R+G +++AR+LF M +R+V SW+ MISG A++ +
Sbjct: 155 LFDGMPVRD-AGSWNILLAALVRSGTMDEARRLFERMPERNVMSWTTMISGLARSGSADE 213
Query: 403 ALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAI-I 461
A LF GM + V VS I SG + R L ++ D S I I
Sbjct: 214 ARALFDGMPERNV-------VSWNAMI--SGYARNLRIDEALDLFMNMPERDVASWNIMI 264
Query: 462 DMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLN 521
+ + + A E+F + R +V W ++ G ++ + L++++ + I+ N
Sbjct: 265 TGFIQNKDLKKAQELFDEMPKR--NVVSWTTMMNGCLQGNESEMALQVFNGMLVDGIRPN 322
Query: 522 SITFIGVLSTCCH-AGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEV 580
+TF+G + + AGL + + + K+ + + ++ ++ L + G++ A +V
Sbjct: 323 QVTFLGAVDAGSNLAGLSEGQQVHQMICKTPFQFDNFIE--SSLMKLYAKCGEIRLARKV 380
Query: 581 IRSMPMKADVVIWGTLLAASRIHG 604
+ + DV+ W ++AA HG
Sbjct: 381 F-DLSGEKDVISWNGMIAAYAHHG 403
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 110/249 (44%), Gaps = 25/249 (10%)
Query: 352 HIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMV 411
H+ N IA G + DAR+LF+ RDV SW+AM++ YA+ Q + A L H
Sbjct: 38 HVQDPNRRIAELAAAGRVPDARRLFDRTPDRDVVSWTAMVAAYARQGQLHEASALLH--- 94
Query: 412 DAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLN-NSITLNDNLSAAIIDMYAKCGSI 470
+ N +T ++ A + + E R + + N ++ N L A YA G +
Sbjct: 95 RPDARRNVVTWTALLSGYARARRVDEARALFDRMPERNVVSWNTMLEA-----YASAGRM 149
Query: 471 NTAFEVF--YHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGV 528
A +F +RD WN ++ L G + +++ + +RN+ +++ +
Sbjct: 150 GAACALFDGMPVRD----AGSWNILLAALVRSGTMDEARRLFERMPERNV----MSWTTM 201
Query: 529 LSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKA 588
+S +G D F M E ++ + M+ R ++++A ++ +MP +
Sbjct: 202 ISGLARSGSADEARALFDGMP-----ERNVVSWNAMISGYARNLRIDEALDLFMNMPER- 255
Query: 589 DVVIWGTLL 597
DV W ++
Sbjct: 256 DVASWNIMI 264
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 104/236 (44%), Gaps = 44/236 (18%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
++ + A+ S +S+GQQ+H +I K+ + + FI++SL+ LYAKCG I
Sbjct: 323 QVTFLGAVDAGSNLAGLSEGQQVHQMICKTPFQFDNFIESSLMKLYAKCGEI-------- 374
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
RL AR+VFD + K +S+ MI +A + EA+ +
Sbjct: 375 ---------------------RL--ARKVFDLSGEKDVISWNGMIAAYAHHGAGVEAIAL 411
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTN----LLN 198
+ M+ PN+VT ++S+ H G + E + + K D + + L++
Sbjct: 412 YEKMQENRYKPNDVTYVGLLSACSHSGLVDEGLRIFEYMAK---DKSIAVRDEHYSCLID 468
Query: 199 MYCVCSSLVEARSLFDEMKERNIVS--WNVMLNGFAKAGLVEL----ARELFERIP 248
+ L +A+ L + +K + S W+ +L G G + AR L E P
Sbjct: 469 LCSRAGRLDDAKRLINGLKLKPTSSTVWSALLGGCNAHGNESIGDLAARNLLEAEP 524
>gi|90265157|emb|CAH67783.1| H0201G08.10 [Oryza sativa Indica Group]
Length = 530
Score = 301 bits (772), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 155/447 (34%), Positives = 252/447 (56%), Gaps = 8/447 (1%)
Query: 225 NVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIA 284
+L+ +A G + AR LF+ +P + +V M ++ + ++A+ ++ M+ DG+
Sbjct: 49 TALLSAYAALGSPDHARRLFDEMPEQGLVPRTAMARAHVASGQAAQAIAVFGDMVADGVF 108
Query: 285 PNDVMIVDLISACGRAMAF----GEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINL 340
P++V + + AC A ++ G IH+++V +G F+ +I Y G + +
Sbjct: 109 PDNVAVAVALGACHGAGSWTARRNPGKMIHALVVTSGIVPDVFVSTELIRVYGESGELPV 168
Query: 341 ARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQP 400
+R F+ +WNA++ + R+G ++ A ++F M +RDV SW+ +++GY +
Sbjct: 169 SRRVFDDMPSRSTITWNAMLHQYARHGKVDTAYEMFLAMPRRDVVSWNTVLAGYCVAGRC 228
Query: 401 NMALELFHGMVDA---GVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLS 457
AL LF MV V PN TM ++ A A +G L+ G W H Y+ N + + L
Sbjct: 229 REALGLFRQMVSPSSCAVHPNVPTMSTILGACAGAGCLETGIWVHAYIERNRMNDDGYLD 288
Query: 458 AAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRN 517
+IDMY KCGSI+ A +VF R + W +ICGLAMHG L+++ ++
Sbjct: 289 RCLIDMYCKCGSIDNALQVFEKA-PRKKDLFSWTTVICGLAMHGRTTDALRMFDMMQDNG 347
Query: 518 IKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDA 577
I + +T +GVL+ C H GLVD G YF SM++ + + P ++HYGCM+DLLGR G+L++A
Sbjct: 348 ICPDDVTLVGVLNACAHGGLVDEGLGYFYSMEAKFRITPKIEHYGCMIDLLGRVGRLQEA 407
Query: 578 EEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADA 637
+IR+MPM + VIWG L+A ++HGN+E+G+ AA+ L L P RV+LS++YA A
Sbjct: 408 YSMIRTMPMDPNTVIWGAFLSACKVHGNMELGKIAAEELTRLDPDDPWGRVMLSSMYAKA 467
Query: 638 GRWEDAFSIRKEMRDCGMKRLPGFSGV 664
W R+EM +K+ PG S +
Sbjct: 468 QDWIGLARERREMNSMQVKKTPGCSSI 494
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 117/426 (27%), Positives = 192/426 (45%), Gaps = 53/426 (12%)
Query: 95 MISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPN 154
++S Y + AR +FD+ P + V T+M + +A+ VF DM GV P+
Sbjct: 51 LLSAYAALGSPDHARRLFDEMPEQGLVPRTAMARAHVASGQAAQAIAVFGDMVADGVFPD 110
Query: 155 EVTLASVISSSVHLGGIWECR-----MLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
V +A V + H G W R M+H LV+ I V +ST L+ +Y L +
Sbjct: 111 NVAVA-VALGACHGAGSWTARRNPGKMIHALVVTSGIVPDVFVSTELIRVYGESGELPVS 169
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLS 269
R +FD+M R+ ++WN ML+ +A+ G V+ A E+F +P +DVVSW T++ GY R
Sbjct: 170 RRVFDDMPSRSTITWNAMLHQYARHGKVDTAYEMFLAMPRRDVVSWNTVLAGYCVAGRCR 229
Query: 270 EALTMYRAMLCD---GIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQA 326
EAL ++R M+ + PN + ++ AC A G+ +H+ I + + ++
Sbjct: 230 EALGLFRQMVSPSSCAVHPNVPTMSTILGACAGAGCLETGIWVHAYIERNRMNDDGYLDR 289
Query: 327 TIIHFYAACGRINLARLQFELGI-KDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVY 385
+I Y CG I+ A FE K + SW +I G +G DA ++F+ MQ
Sbjct: 290 CLIDMYCKCGSIDNALQVFEKAPRKKDLFSWTTVICGLAMHGRTTDALRMFDMMQ----- 344
Query: 386 SWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYV 445
D G+ P+++T+V V A A G + EG + Y
Sbjct: 345 --------------------------DNGICPDDVTLVGVLNACAHGGLVDEG-LGYFYS 377
Query: 446 LNNSITLNDNLS--AAIIDMYAKCGSINTAFEVFYHIRDRTTSVSP----WNAIICGLAM 499
+ + + +ID+ + G + A+ + RT + P W A + +
Sbjct: 378 MEAKFRITPKIEHYGCMIDLLGRVGRLQEAYSMI-----RTMPMDPNTVIWGAFLSACKV 432
Query: 500 HGDANL 505
HG+ L
Sbjct: 433 HGNMEL 438
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 129/273 (47%), Gaps = 41/273 (15%)
Query: 42 GQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIR 101
G+ IH+L+ SG+ + F+ LI +Y + G + ++ +FD + + N M+ Y R
Sbjct: 134 GKMIHALVVTSGIVPDVFVSTELIRVYGESGELPVSRRVFDDMPSRSTITWNAMLHQYAR 193
Query: 102 NDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDM---RILGVIPNEVTL 158
+ +++ A E+F P + VS+ +++ G+ REAL +FR M V PN T+
Sbjct: 194 HGKVDTAYEMFLAMPRRDVVSWNTVLAGYCVAGRCREALGLFRQMVSPSSCAVHPNVPTM 253
Query: 159 ASVISSSVHLG----GIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFD 214
++++ + G GIW +H + + ++ + L++MYC C S+ A +F+
Sbjct: 254 STILGACAGAGCLETGIW----VHAYIERNRMNDDGYLDRCLIDMYCKCGSIDNALQVFE 309
Query: 215 EMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTM 274
+ + ++LF SW T+I G R ++AL M
Sbjct: 310 KAPRK---------------------KDLF---------SWTTVICGLAMHGRTTDALRM 339
Query: 275 YRAMLCDGIAPNDVMIVDLISACGRAMAFGEGL 307
+ M +GI P+DV +V +++AC EGL
Sbjct: 340 FDMMQDNGICPDDVTLVGVLNACAHGGLVDEGL 372
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 100/236 (42%), Gaps = 39/236 (16%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
L C+ + G +H+ I ++ + + ++ LI++Y KCG I
Sbjct: 257 LGACAGAGCLETGIWVHAYIERNRMNDDGYLDRCLIDMYCKCGSI--------------- 301
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKC-CVSYTSMIMGFAQNDCWREALEVFRDMRI 148
++A +VF+K P K S+T++I G A + +AL +F M+
Sbjct: 302 ----------------DNALQVFEKAPRKKDLFSWTTVICGLAMHGRTTDALRMFDMMQD 345
Query: 149 LGVIPNEVTLASVISSSVHLGGIWE-CRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLV 207
G+ P++VTL V+++ H G + E + + K I + ++++ L
Sbjct: 346 NGICPDDVTLVGVLNACAHGGLVDEGLGYFYSMEAKFRITPKIEHYGCMIDLLGRVGRLQ 405
Query: 208 EARSLFDEMK-ERNIVSWNVMLNGFAKAGLVELAR---ELFERIPSKDVVSWGTMI 259
EA S+ M + N V W L+ G +EL + E R+ D WG ++
Sbjct: 406 EAYSMIRTMPMDPNTVIWGAFLSACKVHGNMELGKIAAEELTRLDPDD--PWGRVM 459
>gi|15241180|ref|NP_200442.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171630|sp|Q9FMA1.1|PP433_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g56310
gi|10177829|dbj|BAB11258.1| unnamed protein product [Arabidopsis thaliana]
gi|332009364|gb|AED96747.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 530
Score = 301 bits (772), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 167/443 (37%), Positives = 265/443 (59%), Gaps = 17/443 (3%)
Query: 232 AKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERL---SEALTMYRAMLCDGIAPNDV 288
+ AG + A +F P + TMI ++ S A+T+YR + P+
Sbjct: 58 SNAGHLRYAYSVFTHQPCPNTYLHNTMIRALSLLDEPNAHSIAITVYRKLWALCAKPDTF 117
Query: 289 MIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQF-EL 347
++ R G QIH +V GFD + +I Y +CG + AR F E+
Sbjct: 118 TFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEM 177
Query: 348 GIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ--KRDVYSWSAMISGYAQNEQPNMALE 405
+KD + WNAL+AG+ + G +++AR L M R+ SW+ +ISGYA++ + + A+E
Sbjct: 178 LVKD-VNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIE 236
Query: 406 LFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYV----LNNSITLNDNLSAAII 461
+F M+ V+P+E+T+++V A A G+L+ G YV +N +++LN+ A+I
Sbjct: 237 VFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNN----AVI 292
Query: 462 DMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLN 521
DMYAK G+I A +VF + +R +V W II GLA HG L +++ + K ++ N
Sbjct: 293 DMYAKSGNITKALDVFECVNER--NVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPN 350
Query: 522 SITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVI 581
+TFI +LS C H G VDLG+R F SM+S Y + P+++HYGCM+DLLGRAG+L +A+EVI
Sbjct: 351 DVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVI 410
Query: 582 RSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWE 641
+SMP KA+ IWG+LLAAS +H ++E+GERA L L+P++ + +LL+N+Y++ GRW+
Sbjct: 411 KSMPFKANAAIWGSLLAASNVHHDLELGERALSELIKLEPNNSGNYMLLANLYSNLGRWD 470
Query: 642 DAFSIRKEMRDCGMKRLPGFSGV 664
++ +R M+ G+K++ G S +
Sbjct: 471 ESRMMRNMMKGIGVKKMAGESSI 493
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 125/494 (25%), Positives = 218/494 (44%), Gaps = 70/494 (14%)
Query: 43 QQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRN 102
Q+I++L SGL N F+ + K ++ TL C ++I+G R
Sbjct: 3 QRINALSLSSGL--NWFV--------------TSLKIHGNNLKTLKQSHCYMIITGLNR- 45
Query: 103 DRLNDAR---------------EVFDKTPIKCCVSYTSMIMGFA---QNDCWREALEVFR 144
D LN A+ VF P + +MI + + + A+ V+R
Sbjct: 46 DNLNVAKFIEACSNAGHLRYAYSVFTHQPCPNTYLHNTMIRALSLLDEPNAHSIAITVYR 105
Query: 145 DMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCS 204
+ L P+ T V+ +V + +W R +HG V+ D V + T L+ MY C
Sbjct: 106 KLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCG 165
Query: 205 SLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPS--KDVVSWGTMIDGY 262
L +AR +FDEM +++ WN +L G+ K G ++ AR L E +P ++ VSW +I GY
Sbjct: 166 GLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGY 225
Query: 263 LQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD 322
+ R SEA+ +++ ML + + P++V ++ ++SAC + G +I S + G +
Sbjct: 226 AKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAV 285
Query: 323 FIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKR 382
+ +I YA G I A FE + ++ +W +IAG +G +A +FN
Sbjct: 286 SLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNR---- 341
Query: 383 DVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAH 442
MV AGV+PN++T +++ A + G + G+
Sbjct: 342 ---------------------------MVKAGVRPNDVTFIAILSACSHVGWVDLGKRLF 374
Query: 443 EYVLNN-SITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHG 501
+ + I N +ID+ + G + A EV + + + + W +++ +H
Sbjct: 375 NSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANA-AIWGSLLAASNVHH 433
Query: 502 DANLTLKIYSDLEK 515
D L + S+L K
Sbjct: 434 DLELGERALSELIK 447
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 128/258 (49%), Gaps = 33/258 (12%)
Query: 42 GQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIR 101
G+QIH + G +S+ + LI +Y CG + A+ MFD D N +++GY +
Sbjct: 135 GRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGK 194
Query: 102 NDRLNDAREVFDKTP--IKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLA 159
+++AR + + P ++ VS+T +I G+A++ EA+EVF+ M + V P+EVTL
Sbjct: 195 VGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLL 254
Query: 160 SVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKER 219
+V+S+ LG + + V ++ V ++ +++MY ++ +A +F+ + ER
Sbjct: 255 AVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNER 314
Query: 220 NIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAML 279
N+V+W ++ G A G +EAL M+ M+
Sbjct: 315 NVVTWTTIIAGLATHG-------------------------------HGAEALAMFNRMV 343
Query: 280 CDGIAPNDVMIVDLISAC 297
G+ PNDV + ++SAC
Sbjct: 344 KAGVRPNDVTFIAILSAC 361
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 103/243 (42%), Gaps = 72/243 (29%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E+ L++ L C+ ++ G++I S + G+ + N++I++YAK G I++A +F+
Sbjct: 250 EVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFE 309
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+ RN V++T++I G A + EAL +
Sbjct: 310 CVNE--------------RN-----------------VVTWTTIIAGLATHGHGAEALAM 338
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
F M GV PN+VT +++S+ H+G W + L
Sbjct: 339 FNRMVKAGVRPNDVTFIAILSACSHVG--W---------VDL------------------ 369
Query: 203 CSSLVEARSLFDEMKER-----NIVSWNVMLNGFAKAGLVELARELFERIPSK-DVVSWG 256
+ LF+ M+ + NI + M++ +AG + A E+ + +P K + WG
Sbjct: 370 ------GKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWG 423
Query: 257 TMI 259
+++
Sbjct: 424 SLL 426
Score = 42.4 bits (98), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 97/224 (43%), Gaps = 18/224 (8%)
Query: 435 LKEGRWAHEYVLNNSITLNDNLSAA-IIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAI 493
LK + +H Y++ + DNL+ A I+ + G + A+ VF H T + N +
Sbjct: 28 LKTLKQSHCYMIITGLN-RDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPNTYLH--NTM 84
Query: 494 ICGLAMHGDAN---LTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKS 550
I L++ + N + + +Y L K ++ TF VL V G R
Sbjct: 85 IRALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFG-RQIHGQVV 143
Query: 551 VYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGE 610
V+ + + ++ + G L DA ++ M +K DV +W LLA G +VGE
Sbjct: 144 VFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVK-DVNVWNALLA-----GYGKVGE 197
Query: 611 -RAAKSLAGLQPSHGPSRVLLSNI---YADAGRWEDAFSIRKEM 650
A+SL + P + V + + YA +GR +A + + M
Sbjct: 198 MDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRM 241
>gi|326515658|dbj|BAK07075.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 796
Score = 301 bits (772), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 201/635 (31%), Positives = 304/635 (47%), Gaps = 97/635 (15%)
Query: 33 CSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVAC 92
CS + +G+ +H+L G+ F+ NSL+++YA+CG + QA+ +FD+ D V+
Sbjct: 124 CSRAGRLREGKAVHALSVLEGIAGGVFVSNSLVSMYARCGDMGQARQVFDAADERDDVSW 183
Query: 93 NIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVI 152
N ++SGY+R AQ+D L VF MR G+
Sbjct: 184 NALVSGYVRAG---------------------------AQDD----MLRVFAMMRRSGIG 212
Query: 153 PNEVTLASVISSSVHLGGIWECRM-----LHGLVIKLMIDGFVIISTNLLNMYCVCSSLV 207
N L SVI G + M +HG V+K D V +++ ++ MY +L
Sbjct: 213 LNSFALGSVIKC---CAGSDDPVMDIAAAVHGCVVKAGFDSDVFLASAMVGMYAKKGALS 269
Query: 208 EARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVER 267
EA +LF + + N+V +N M+ G +D + GT +
Sbjct: 270 EAVALFKSVLDPNVVVFNAMIAGLC-----------------RDEAAVGTDV-------- 304
Query: 268 LSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQAT 327
L EAL++Y + G+ P + +I AC A G QIH ++K F DFI +
Sbjct: 305 LREALSLYSEVQSRGMEPTEFTFSSVIRACNLAGDIEFGKQIHGQVLKHCFQGDDFIGSA 364
Query: 328 IIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSW 387
+I Y + +G +ED + F ++ K+DV +W
Sbjct: 365 LIDLY-------------------------------LNSGCMEDGFRCFTSVPKQDVVTW 393
Query: 388 SAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLN 447
+AMISG QNE AL LFH ++ AG+KP+ T+ SV A AS + G +
Sbjct: 394 TAMISGCVQNELFERALTLFHELLGAGLKPDPFTISSVMNACASLAVARTGEQIQCFATK 453
Query: 448 NSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTL 507
+ + + I MYA+ G ++ A F + + + W+A+I A HG A L
Sbjct: 454 SGFGRFTAMGNSCIHMYARSGDVHAAVRRFQEM--ESHDIVSWSAVISSHAQHGCARDAL 511
Query: 508 KIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDL 567
+ ++++ + N ITF+GVL+ C H GLVD G +Y+++MK Y + P +KH C+VDL
Sbjct: 512 RFFNEMVDAKVVPNEITFLGVLTACSHGGLVDEGLKYYETMKEEYALSPTIKHCTCVVDL 571
Query: 568 LGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSR 627
LGRAG+L DAE IR + VIW +LLA+ RIH ++E G+ A + LQPS S
Sbjct: 572 LGRAGRLADAEAFIRDSIFHDEPVIWRSLLASCRIHRDMERGQLVADRIMELQPSSSASY 631
Query: 628 VLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
V L NIY DAG A IR M++ G+K+ PG S
Sbjct: 632 VNLYNIYLDAGELSLASKIRDVMKERGVKKEPGLS 666
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 112/461 (24%), Positives = 193/461 (41%), Gaps = 89/461 (19%)
Query: 177 LHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGL 236
+H +++ + + LL YC AR L DEM N VS+N++++ +++AG
Sbjct: 36 VHAHIVRAHPSPSLFLRNTLLAAYCRLGG--HARRLLDEMPRTNAVSFNLLIDAYSRAGQ 93
Query: 237 VELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISA 296
E + E F RA G+ + ++A
Sbjct: 94 PEASLETFA------------------------------RARRSAGVRADRFTYAAALAA 123
Query: 297 CGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASW 356
C RA EG +H++ V G F+ +++ YA CG + AR F+ + SW
Sbjct: 124 CSRAGRLREGKAVHALSVLEGIAGGVFVSNSLVSMYARCGDMGQARQVFDAADERDDVSW 183
Query: 357 NALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVK 416
NAL++G++R G +D ++F M++ +G+
Sbjct: 184 NALVSGYVRAGAQDDMLRVFAMMRR-------------------------------SGIG 212
Query: 417 PNEITMVSVF--CAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAF 474
N + SV CA + + H V+ + L++A++ MYAK G+++ A
Sbjct: 213 LNSFALGSVIKCCAGSDDPVMDIAAAVHGCVVKAGFDSDVFLASAMVGMYAKKGALSEAV 272
Query: 475 EVFYHIRDRTTSVSPWNAIICGLAMHGDANLT------LKIYSDLEKRNIKLNSITFIGV 528
+F + D V +NA+I GL A T L +YS+++ R ++ TF V
Sbjct: 273 ALFKSVLDPNVVV--FNAMIAGLCRDEAAVGTDVLREALSLYSEVQSRGMEPTEFTFSSV 330
Query: 529 LSTCCHAGLVDLGER-YFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMK 587
+ C AG ++ G++ + + +K + + + ++DL +G +ED S+P K
Sbjct: 331 IRACNLAGDIEFGKQIHGQVLKHCFQGDDFIG--SALIDLYLNSGCMEDGFRCFTSVP-K 387
Query: 588 ADVVIWGTLLAASRIHGNV--EVGERAAKSL-----AGLQP 621
DVV W + I G V E+ ERA AGL+P
Sbjct: 388 QDVVTWTAM-----ISGCVQNELFERALTLFHELLGAGLKP 423
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/291 (20%), Positives = 110/291 (37%), Gaps = 62/291 (21%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E S +R C+ + G+QIH + K + + FI ++LI+LY G + F
Sbjct: 324 EFTFSSVIRACNLAGDIEFGKQIHGQVLKHCFQGDDFIGSALIDLYLNSGCMEDGFRCFT 383
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
S D V MISG CV QN+ + AL +
Sbjct: 384 SVPKQDVVTWTAMISG---------------------CV----------QNELFERALTL 412
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
F ++ G+ P+ T++SV+++ L + K F + + ++MY
Sbjct: 413 FHELLGAGLKPDPFTISSVMNACASLAVARTGEQIQCFATKSGFGRFTAMGNSCIHMYAR 472
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
+ A F EM+ +IVSW+ +++ A+ G
Sbjct: 473 SGDVHAAVRRFQEMESHDIVSWSAVISSHAQHGCAR------------------------ 508
Query: 263 LQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSII 313
+AL + M+ + PN++ + +++AC EGL+ + +
Sbjct: 509 -------DALRFFNEMVDAKVVPNEITFLGVLTACSHGGLVDEGLKYYETM 552
>gi|38345134|emb|CAE02724.2| OSJNBa0055H05.11 [Oryza sativa Japonica Group]
gi|215697200|dbj|BAG91194.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 408
Score = 301 bits (771), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 154/382 (40%), Positives = 234/382 (61%), Gaps = 6/382 (1%)
Query: 283 IAPNDVMIVDLISACG--RAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINL 340
+ P+ V+I ++S C R + FG+ + + ++ D + +++ YA+C + +
Sbjct: 6 VVPDQVIIATVLSTCAHTRNLRFGKAIHSYMLVSDTLIDAQ--VSCALMNMYASCADMEM 63
Query: 341 ARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQP 400
A + + I ++ G+ +NG +E A +FN M +DV SWSAMI+GYA++ +P
Sbjct: 64 AEKLYNRVSEKEIVLSTTMVYGYAKNGKVEIAHSIFNGMPAKDVVSWSAMIAGYAESSKP 123
Query: 401 NMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAI 460
AL LFH M +GVKP+EITM+SV A A+ G L++ R H +V N+S+ + A+
Sbjct: 124 MEALNLFHDMQRSGVKPDEITMLSVISACANVGALEKARCIHSFVENHSMCKILPIGNAL 183
Query: 461 IDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKL 520
IDM++KCGS+ A +VF + + +V W +II AMHGD L ++ +++ I+
Sbjct: 184 IDMFSKCGSLTLALDVFNAMPQK--NVVTWTSIITASAMHGDGRSALTLFENMKSEGIQP 241
Query: 521 NSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEV 580
N +TF+G+L CCHAGLV+ G FK M Y +EP +HYGCMVDLLGRA L A ++
Sbjct: 242 NGVTFLGLLYACCHAGLVEEGRLLFKIMVQQYRIEPMHEHYGCMVDLLGRAKLLGQAADL 301
Query: 581 IRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRW 640
I+SM ++ +VVIWG+LLAA R+HG++E+G AAK + L P+HG ++VLLSNIYA+ G W
Sbjct: 302 IQSMHLRPNVVIWGSLLAACRMHGDLELGTFAAKKILELDPNHGGAQVLLSNIYAEYGNW 361
Query: 641 EDAFSIRKEMRDCGMKRLPGFS 662
D +R M G + G S
Sbjct: 362 NDVKEVRGVMEVQGTWKKKGCS 383
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 98/358 (27%), Positives = 174/358 (48%), Gaps = 37/358 (10%)
Query: 151 VIPNEVTLASVISSSVHLGGIWECRMLHG--LVIKLMIDGFVIISTNLLNMYCVCSSLVE 208
V+P++V +A+V+S+ H + + +H LV +ID V S L+NMY C+ +
Sbjct: 6 VVPDQVIIATVLSTCAHTRNLRFGKAIHSYMLVSDTLIDAQV--SCALMNMYASCADMEM 63
Query: 209 ARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERL 268
A L++ + E+ IV M+ G+AK G VE+A +F +P+KDVVSW MI GY + +
Sbjct: 64 AEKLYNRVSEKEIVLSTTMVYGYAKNGKVEIAHSIFNGMPAKDVVSWSAMIAGYAESSKP 123
Query: 269 SEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATI 328
EAL ++ M G+ P+++ ++ +ISAC A + IHS +
Sbjct: 124 MEALNLFHDMQRSGVKPDEITMLSVISACANVGALEKARCIHSFVEN------------- 170
Query: 329 IHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWS 388
++ C + + NALI F + G + A +FN M +++V +W+
Sbjct: 171 ---HSMCKILPIG---------------NALIDMFSKCGSLTLALDVFNAMPQKNVVTWT 212
Query: 389 AMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNN 448
++I+ A + AL LF M G++PN +T + + A +G ++EGR + ++
Sbjct: 213 SIITASAMHGDGRSALTLFENMKSEGIQPNGVTFLGLLYACCHAGLVEEGRLLFKIMVQQ 272
Query: 449 -SITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANL 505
I ++D+ + + A ++ + R +V W +++ MHGD L
Sbjct: 273 YRIEPMHEHYGCMVDLLGRAKLLGQAADLIQSMHLR-PNVVIWGSLLAACRMHGDLEL 329
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 93/357 (26%), Positives = 168/357 (47%), Gaps = 47/357 (13%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
++ + + L C+ + G+ IHS + S + + +L+N+YA C + A+ +++
Sbjct: 10 QVIIATVLSTCAHTRNLRFGKAIHSYMLVSDTLIDAQVSCALMNMYASCADMEMAEKLYN 69
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
S + V M+ GY +N ++ A +F+ P K VS+++MI G+A++ EAL +
Sbjct: 70 RVSEKEIVLSTTMVYGYAKNGKVEIAHSIFNGMPAKDVVSWSAMIAGYAESSKPMEALNL 129
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
F DM+ GV P+E+T+ SVIS+ ++G + + R +H V + + I L++M+
Sbjct: 130 FHDMQRSGVKPDEITMLSVISACANVGALEKARCIHSFVENHSMCKILPIGNALIDMFSK 189
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
C SL A +F+ M ++N+V+W ++ A G DG
Sbjct: 190 CGSLTLALDVFNAMPQKNVVTWTSIITASAMHG------------------------DG- 224
Query: 263 LQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD 322
ALT++ M +GI PN V + L+ AC A EG + I+V+
Sbjct: 225 ------RSALTLFENMKSEGIQPNGVTFLGLLYACCHAGLVEEGRLLFKIMVQQ------ 272
Query: 323 FIQATIIHFYAAC-----GRINL----ARLQFELGIKDHIASWNALIAGFIRNGMIE 370
+ +H + C GR L A L + ++ ++ W +L+A +G +E
Sbjct: 273 -YRIEPMHEHYGCMVDLLGRAKLLGQAADLIQSMHLRPNVVIWGSLLAACRMHGDLE 328
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 114/258 (44%), Gaps = 47/258 (18%)
Query: 2 PLDHFHSVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQ 61
P++ + + Q++ ++ E+ ++S + C+ A+ + + IHS + + I
Sbjct: 123 PMEALNLFHDMQRSGVKPD--EITMLSVISACANVGALEKARCIHSFVENHSMCKILPIG 180
Query: 62 NSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCV 121
N+LI++++KCG L A +VF+ P K V
Sbjct: 181 NALIDMFSKCG-------------------------------SLTLALDVFNAMPQKNVV 209
Query: 122 SYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLV 181
++TS+I A + R AL +F +M+ G+ PN VT ++ + H G + E R+L
Sbjct: 210 TWTSIITASAMHGDGRSALTLFENMKSEGIQPNGVTFLGLLYACCHAGLVEEGRLL---- 265
Query: 182 IKLMIDGFVIISTN-----LLNMYCVCSSLVEARSLFDEMKER-NIVSWNVMLNGFAKAG 235
K+M+ + I + ++++ L +A L M R N+V W +L G
Sbjct: 266 FKIMVQQYRIEPMHEHYGCMVDLLGRAKLLGQAADLIQSMHLRPNVVIWGSLLAACRMHG 325
Query: 236 LVEL----ARELFERIPS 249
+EL A+++ E P+
Sbjct: 326 DLELGTFAAKKILELDPN 343
>gi|225445472|ref|XP_002281953.1| PREDICTED: pentatricopeptide repeat-containing protein At4g32430,
mitochondrial [Vitis vinifera]
Length = 773
Score = 301 bits (771), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 206/643 (32%), Positives = 317/643 (49%), Gaps = 108/643 (16%)
Query: 27 VSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCST 86
+ L +CS H G Q+HS I K GL+ F+ N+LI +Y++C
Sbjct: 180 TTVLAFCSDHEGFIFGFQLHSRILKCGLDCEVFVGNALITMYSRC--------------- 224
Query: 87 LDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQN-DCWREALEVFRD 145
C RL +AR VFD+ K VS+ +M+ G+AQ + EA+ VF +
Sbjct: 225 -----C-----------RLVEARRVFDEMRNKDLVSWNAMLSGYAQEGNSGLEAILVFLE 268
Query: 146 MRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSS 205
M G+ + V+ IS+ H R +H L +K+ D V VC
Sbjct: 269 MLKEGMKLDHVSFTGAISACGHGKEFELGRQIHSLAVKIGYDTHVK----------VC-- 316
Query: 206 LVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQV 265
NV+++ ++K +E A+ +FE I ++VVSW TMI
Sbjct: 317 -------------------NVLISTYSKCEDIEDAKLVFESIIDRNVVSWTTMIS----- 352
Query: 266 ERLSE--ALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDF 323
+SE A +++ M DG+ PNDV V LI A EG IH + VK F
Sbjct: 353 --ISEEDATSLFNEMRRDGVYPNDVTFVGLIHAITMKNLVEEGQMIHGVCVKTSF----- 405
Query: 324 IQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRD 383
+N++ N+LI + + + D+ ++F + R+
Sbjct: 406 -----------LSELNVS---------------NSLITMYAKFESMSDSMKVFEELNYRE 439
Query: 384 VYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSG--TLKEGRWA 441
+ SW+++ISGYAQN AL+ F + +PNE T SV +IAS+ +++ G+
Sbjct: 440 IISWNSLISGYAQNGLWQEALQTFLSALMES-RPNEFTFGSVLSSIASAEAISMRHGQRC 498
Query: 442 HEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHG 501
H ++L + N +S+A++DMYAK GSI + VF + W AII A HG
Sbjct: 499 HSHILKLGLNTNPIVSSALLDMYAKRGSICESLGVFSETPLKNEVA--WTAIISAHARHG 556
Query: 502 DANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHY 561
D + ++ D+E+ +K +SITF+ V++ C G+VD G + F SM + +EP +HY
Sbjct: 557 DYEAVMNLFKDMEREGVKPDSITFLAVITACGRKGMVDTGYQLFNSMVKDHLIEPSPEHY 616
Query: 562 GCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQP 621
MVD+LGRAG+L++AEE + +P A + + +LL A RIHGNV++ +R A L ++P
Sbjct: 617 SSMVDMLGRAGRLKEAEEFVGQIPGGAGLSVLQSLLGACRIHGNVDMAKRVADDLIEMEP 676
Query: 622 SHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
S VL+SN+YA+ G WE IRK MR+ G+++ GFS V
Sbjct: 677 MGSGSYVLMSNLYAEKGEWEKVAKIRKGMRERGVRKEIGFSWV 719
Score = 189 bits (480), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 160/572 (27%), Positives = 257/572 (44%), Gaps = 115/572 (20%)
Query: 42 GQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIR 101
G QIH+ SG S+ + NSL+N+Y K GL +A +F++ + D V+ N ++SG+ R
Sbjct: 97 GCQIHAFAISSGFISHVTVPNSLMNMYCKAGLFDRALVVFENLNNPDIVSWNTVLSGFQR 156
Query: 102 NDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASV 161
+D +AL M GV + VT +V
Sbjct: 157 SD----------------------------------DALNFALRMNFTGVAFDAVTCTTV 182
Query: 162 IS-SSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERN 220
++ S H G I+ + LH ++K +D V + L+ MY C LVEAR +FDEM+ ++
Sbjct: 183 LAFCSDHEGFIFGFQ-LHSRILKCGLDCEVFVGNALITMYSRCCRLVEARRVFDEMRNKD 241
Query: 221 IVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLC 280
+VSWN ML+G+A+ G L EA+ ++ ML
Sbjct: 242 LVSWNAMLSGYAQEGNSGL------------------------------EAILVFLEMLK 271
Query: 281 DGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINL 340
+G+ + V ISACG F G QIHS+ VK G+D + + +I Y+ C I
Sbjct: 272 EGMKLDHVSFTGAISACGHGKEFELGRQIHSLAVKIGYDTHVKVCNVLISTYSKCEDIED 331
Query: 341 ARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQP 400
A+L FE I ++ SW +I+ I EDA LFN M++ VY
Sbjct: 332 AKLVFESIIDRNVVSWTTMIS--ISE---EDATSLFNEMRRDGVY--------------- 371
Query: 401 NMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAI 460
PN++T V + AI ++EG+ H + S N+S ++
Sbjct: 372 ----------------PNDVTFVGLIHAITMKNLVEEGQMIHGVCVKTSFLSELNVSNSL 415
Query: 461 IDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIY--SDLEKRNI 518
I MYAK S++ + +VF + R + WN++I G A +G L+ + + +E R
Sbjct: 416 ITMYAKFESMSDSMKVFEELNYR--EIISWNSLISGYAQNGLWQEALQTFLSALMESRP- 472
Query: 519 KLNSITFIGVLSTCCHAGLVDL--GER-YFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLE 575
N TF VLS+ A + + G+R + +K N P + ++D+ + G +
Sbjct: 473 --NEFTFGSVLSSIASAEAISMRHGQRCHSHILKLGLNTNPIVS--SALLDMYAKRGSIC 528
Query: 576 DAEEVIRSMPMKADVVIWGTLLAASRIHGNVE 607
++ V P+K +V W +++A HG+ E
Sbjct: 529 ESLGVFSETPLKNEVA-WTAIISAHARHGDYE 559
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 120/500 (24%), Positives = 212/500 (42%), Gaps = 117/500 (23%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
++ A+ C G+QIHSL K G +++ + N LI+ Y+KC I AK +F+S
Sbjct: 279 VSFTGAISACGHGKEFELGRQIHSLAVKIGYDTHVKVCNVLISTYSKCEDIEDAKLVFES 338
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
+ D+ VS+T+MI ++ D A +F
Sbjct: 339 ---------------------------IIDRN----VVSWTTMI-SISEED----ATSLF 362
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
+MR GV PN+VT +I + + E +M+HG+ +K + +S +L+ MY
Sbjct: 363 NEMRRDGVYPNDVTFVGLIHAITMKNLVEEGQMIHGVCVKTSFLSELNVSNSLITMYAKF 422
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYL 263
S+ ++ +F+E+ R I+SWN +++G+A+ GL W
Sbjct: 423 ESMSDSMKVFEELNYREIISWNSLISGYAQNGL------------------W-------- 456
Query: 264 QVERLSEALTMYRAMLCDGIAPNDVMIVDLIS--ACGRAMAFGEGLQIHSIIVKAGFDCY 321
EAL + + L + PN+ ++S A A++ G + HS I+K G +
Sbjct: 457 -----QEALQTFLSALMES-RPNEFTFGSVLSSIASAEAISMRHGQRCHSHILKLGLNTN 510
Query: 322 DFIQATIIHFYAACGRINLARLQF-ELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ 380
+ + ++ YA G I + F E +K+ +A W A+I+ R+G E LF +M+
Sbjct: 511 PIVSSALLDMYAKRGSICESLGVFSETPLKNEVA-WTAIISAHARHGDYEAVMNLFKDME 569
Query: 381 KRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRW 440
+ GVKP+ IT ++V A G + G
Sbjct: 570 RE-------------------------------GVKPDSITFLAVITACGRKGMVDTG-- 596
Query: 441 AHEYVLNNSITLNDNL-------SAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAI 493
Y L NS+ + D+L ++++DM + G + A E I +S ++
Sbjct: 597 ---YQLFNSM-VKDHLIEPSPEHYSSMVDMLGRAGRLKEAEEFVGQIPG-GAGLSVLQSL 651
Query: 494 ICGLAMHGDANLTLKIYSDL 513
+ +HG+ ++ ++ DL
Sbjct: 652 LGACRIHGNVDMAKRVADDL 671
Score = 43.5 bits (101), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 92/206 (44%), Gaps = 13/206 (6%)
Query: 403 ALELFHGMVDAGVKPNEITMVSVFCAI-ASSGTLKEGRWAHEYVLNNSITLNDNLSAAII 461
AL+LF + G N I V+V + A G K G H + +++ + + +++
Sbjct: 62 ALDLFKKQLQWGFVGN-IDQVTVAIVLKACCGDSKLGCQIHAFAISSGFISHVTVPNSLM 120
Query: 462 DMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDA-NLTLKIYSDLEKRNIKL 520
+MY K G + A VF ++ + + WN ++ G DA N L+ + +
Sbjct: 121 NMYCKAGLFDRALVVFENLNN--PDIVSWNTVLSGFQRSDDALNFALR----MNFTGVAF 174
Query: 521 NSITFIGVLSTCC-HAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEE 579
+++T VL+ C H G + + + + +K + E + + ++ + R +L +A
Sbjct: 175 DAVTCTTVLAFCSDHEGFIFGFQLHSRILKCGLDCEVFVGN--ALITMYSRCCRLVEARR 232
Query: 580 VIRSMPMKADVVIWGTLLAASRIHGN 605
V M K D+V W +L+ GN
Sbjct: 233 VFDEMRNK-DLVSWNAMLSGYAQEGN 257
>gi|77554180|gb|ABA96976.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 780
Score = 301 bits (771), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 192/640 (30%), Positives = 310/640 (48%), Gaps = 97/640 (15%)
Query: 25 ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSC 84
+LVS + C G IH+L K GL + + N+L+++Y K G + + +FD
Sbjct: 222 SLVSVVPACGTEQEEKFGLSIHALAVKVGLNTMVNLANALVDMYGKFGDVEASMQVFD-- 279
Query: 85 STLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFR 144
G + + VS+ S I F + + L +FR
Sbjct: 280 -------------GMLEQNE----------------VSWNSAIGCFLNAGFYGDVLRMFR 310
Query: 145 DMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCS 204
M V+P +TL+S++ + V LG R +HG IK +D + ++ +L++MY
Sbjct: 311 KMSEHNVMPGSITLSSLLPALVELGSFDLGREVHGYSIKRAMDLDIFVANSLVDMYAKFG 370
Query: 205 SLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQ 264
SL +A ++F++MK+RN+VSWN M+ A LV+ E
Sbjct: 371 SLEKASTIFEQMKDRNVVSWNAMI-----ANLVQNGAE---------------------- 403
Query: 265 VERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFI 324
+EA + M G PN + +V+++ AC R + G QIH+ ++ G FI
Sbjct: 404 ----TEAFRLVTDMQKSGECPNSITLVNVLPACARMASLKMGKQIHAWSIRRGLMFDLFI 459
Query: 325 QATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDV 384
+I Y+ CG+++LAR FE KD + S+N LI
Sbjct: 460 SNALIDMYSKCGQLSLARNIFERSEKDDV-SYNTLIL----------------------- 495
Query: 385 YSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEY 444
GY+Q+ +L LF M G+ + ++ + A + K G+ H
Sbjct: 496 --------GYSQSPWCFESLLLFKQMRSVGIDYDAVSFMGALSACTNLSVFKHGKEIHCV 547
Query: 445 VLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDAN 504
++ ++ + LS +++D+Y K G + TA ++F I + V+ WN +I G MHG +
Sbjct: 548 LVRRLLSGHPFLSNSLLDLYTKGGMLVTASKIFNKITKK--DVASWNTMILGYGMHGQID 605
Query: 505 LTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCM 564
+ +++ ++ + + +++I VL+ C H GLVD G++YF M + N+EP HY CM
Sbjct: 606 IAFELFELMKGDGLDYDHVSYIAVLAACSHGGLVDKGKKYFSQMVA-QNIEPQQMHYACM 664
Query: 565 VDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHG 624
VDLLGRAGQL E+IR MP A+ +WG LL A RIHGN+E+ + AA+ L L+P H
Sbjct: 665 VDLLGRAGQLSKCAEIIRDMPFPANSDVWGALLGACRIHGNIELAQWAAEHLFELKPEHS 724
Query: 625 PSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
L+ N+YA+ GRW +A IRK M+ +++ P +S V
Sbjct: 725 GYYTLMINMYAETGRWNEANKIRKLMKSRKVQKNPAYSWV 764
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 137/573 (23%), Positives = 241/573 (42%), Gaps = 106/573 (18%)
Query: 41 QGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYI 100
+G ++H+ + G ++ F N+L+ YA CG AC
Sbjct: 137 KGLELHASALRRGHLADVFTGNTLVAFYAACG-----------------KAC-------- 171
Query: 101 RNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLAS 160
DAR VFD+ P + VS+ S++ F N + +A M G N +L S
Sbjct: 172 ------DARRVFDEMPERDVVSWNSLVSAFLVNGMFHDARRALVSMMRSGFPLNVASLVS 225
Query: 161 VISSSVHLGGIWECRM---LHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMK 217
V+ + G E + +H L +K+ ++ V ++ L++MY + + +FD M
Sbjct: 226 VVPAC---GTEQEEKFGLSIHALAVKVGLNTMVNLANALVDMYGKFGDVEASMQVFDGML 282
Query: 218 ERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRA 277
E+N VSWN + F AG + L M+R
Sbjct: 283 EQNEVSWNSAIGCFLNAGFY-------------------------------GDVLRMFRK 311
Query: 278 MLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGR 337
M + P + + L+ A +F G ++H +K D F+ +++ YA G
Sbjct: 312 MSEHNVMPGSITLSSLLPALVELGSFDLGREVHGYSIKRAMDLDIFVANSLVDMYAKFGS 371
Query: 338 INLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQN 397
+ A FE ++ SWNA+IA ++NG +A +L +MQK
Sbjct: 372 LEKASTIFEQMKDRNVVSWNAMIANLVQNGAETEAFRLVTDMQK---------------- 415
Query: 398 EQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLS 457
+G PN IT+V+V A A +LK G+ H + + + + +S
Sbjct: 416 ---------------SGECPNSITLVNVLPACARMASLKMGKQIHAWSIRRGLMFDLFIS 460
Query: 458 AAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRN 517
A+IDMY+KCG ++ A +F R VS +N +I G + +L ++ +
Sbjct: 461 NALIDMYSKCGQLSLARNIFE--RSEKDDVS-YNTLILGYSQSPWCFESLLLFKQMRSVG 517
Query: 518 IKLNSITFIGVLSTCCHAGLVDLG-ERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLED 576
I ++++F+G LS C + + G E + ++ + + P L + ++DL + G L
Sbjct: 518 IDYDAVSFMGALSACTNLSVFKHGKEIHCVLVRRLLSGHPFLSN--SLLDLYTKGGMLVT 575
Query: 577 AEEVIRSMPMKADVVIWGTLLAASRIHGNVEVG 609
A ++ + K DV W T++ +HG +++
Sbjct: 576 ASKIFNKIT-KKDVASWNTMILGYGMHGQIDIA 607
Score = 135 bits (340), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 115/462 (24%), Positives = 198/462 (42%), Gaps = 69/462 (14%)
Query: 138 EALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECR--MLHGLVIKLMIDGFVIISTN 195
EAL V+ M V P++ T + ++ E + LH ++ V
Sbjct: 100 EALRVYNLMLRSAVRPDDRTFPFALHAAAAAVASAEDKGLELHASALRRGHLADVFTGNT 159
Query: 196 LLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSW 255
L+ Y C +AR +FDEM ER++VSWN +++ F G+ AR + +VS
Sbjct: 160 LVAFYAACGKACDARRVFDEMPERDVVSWNSLVSAFLVNGMFHDAR--------RALVS- 210
Query: 256 GTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVK 315
M+ G N +V ++ ACG GL IH++ VK
Sbjct: 211 ----------------------MMRSGFPLNVASLVSVVPACGTEQEEKFGLSIHALAVK 248
Query: 316 AGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQL 375
G + +NLA NAL+ + + G +E + Q+
Sbjct: 249 VGLNTM----------------VNLA---------------NALVDMYGKFGDVEASMQV 277
Query: 376 FNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTL 435
F+ M +++ SW++ I + L +F M + V P IT+ S+ A+ G+
Sbjct: 278 FDGMLEQNEVSWNSAIGCFLNAGFYGDVLRMFRKMSEHNVMPGSITLSSLLPALVELGSF 337
Query: 436 KEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIIC 495
GR H Y + ++ L+ ++ +++DMYAK GS+ A +F ++DR +V WNA+I
Sbjct: 338 DLGREVHGYSIKRAMDLDIFVANSLVDMYAKFGSLEKASTIFEQMKDR--NVVSWNAMIA 395
Query: 496 GLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVE 555
L +G ++ +D++K NSIT + VL C + +G++ + +
Sbjct: 396 NLVQNGAETEAFRLVTDMQKSGECPNSITLVNVLPACARMASLKMGKQ-IHAWSIRRGLM 454
Query: 556 PDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLL 597
DL ++D+ + GQL A + + D V + TL+
Sbjct: 455 FDLFISNALIDMYSKCGQLSLARNIFER--SEKDDVSYNTLI 494
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 90/377 (23%), Positives = 175/377 (46%), Gaps = 49/377 (12%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+ LV+ L C+ ++ G+QIH+ + GL + FI N+LI++Y+KCG
Sbjct: 423 ITLVNVLPACARMASLKMGKQIHAWSIRRGLMFDLFISNALIDMYSKCG----------- 471
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
+L+ AR +F+++ K VSY ++I+G++Q+ E+L +F
Sbjct: 472 --------------------QLSLARNIFERSE-KDDVSYNTLILGYSQSPWCFESLLLF 510
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
+ MR +G+ + V+ +S+ +L + +H ++++ ++ G +S +LL++Y
Sbjct: 511 KQMRSVGIDYDAVSFMGALSACTNLSVFKHGKEIHCVLVRRLLSGHPFLSNSLLDLYTKG 570
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSK----DVVSWGTMI 259
LV A +F+++ ++++ SWN M+ G+ G +++A ELFE + D VS+ ++
Sbjct: 571 GMLVTASKIFNKITKKDVASWNTMILGYGMHGQIDIAFELFELMKGDGLDYDHVSYIAVL 630
Query: 260 DGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFD 319
+ + + M+ I P + ++ GRA G+ + II F
Sbjct: 631 AACSHGGLVDKGKKYFSQMVAQNIEPQQMHYACMVDLLGRA---GQLSKCAEIIRDMPFP 687
Query: 320 CYDFIQATIIHFYAACGRINLARLQ----FELGIKDHIASWNALIAGFIRNGMIEDARQL 375
+ ++ G I LA+ FEL +H + +I + G +A ++
Sbjct: 688 ANSDVWGALLGACRIHGNIELAQWAAEHLFELK-PEHSGYYTLMINMYAETGRWNEANKI 746
Query: 376 FNNMQKRDV-----YSW 387
M+ R V YSW
Sbjct: 747 RKLMKSRKVQKNPAYSW 763
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 94/336 (27%), Positives = 154/336 (45%), Gaps = 45/336 (13%)
Query: 269 SEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGE--GLQIHSIIVKAGFDCYDFIQA 326
SEAL +Y ML + P+D + A A+A E GL++H+ ++ G F
Sbjct: 99 SEALRVYNLMLRSAVRPDDRTFPFALHAAAAAVASAEDKGLELHASALRRGHLADVFTGN 158
Query: 327 TIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYS 386
T++ FYAACG+ AR F+ + + SWN+L++ F+ NGM DAR+
Sbjct: 159 TLVAFYAACGKACDARRVFDEMPERDVVSWNSLVSAFLVNGMFHDARR------------ 206
Query: 387 WSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVL 446
A++S M+ +G N ++VSV A + K G H +
Sbjct: 207 --ALVS-----------------MMRSGFPLNVASLVSVVPACGTEQEEKFGLSIHALAV 247
Query: 447 NNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWN-AIICGL--AMHGDA 503
+ NL+ A++DMY K G + + +VF + ++ WN AI C L +GD
Sbjct: 248 KVGLNTMVNLANALVDMYGKFGDVEASMQVFDGMLEQNE--VSWNSAIGCFLNAGFYGD- 304
Query: 504 NLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLG-ERYFKSMKSVYNVEPDLKHYG 562
L+++ + + N+ SIT +L G DLG E + S+K ++ D+
Sbjct: 305 --VLRMFRKMSEHNVMPGSITLSSLLPALVELGSFDLGREVHGYSIKRAMDL--DIFVAN 360
Query: 563 CMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLA 598
+VD+ + G LE A + M + +VV W ++A
Sbjct: 361 SLVDMYAKFGSLEKASTIFEQMKDR-NVVSWNAMIA 395
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 76/159 (47%), Gaps = 5/159 (3%)
Query: 21 DYE-LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKS 79
DY+ ++ + AL C+ G++IH ++ + L + F+ NSL++LY K G++ A
Sbjct: 519 DYDAVSFMGALSACTNLSVFKHGKEIHCVLVRRLLSGHPFLSNSLLDLYTKGGMLVTASK 578
Query: 80 MFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCC----VSYTSMIMGFAQNDC 135
+F+ + D + N MI GY + +++ A E+F+ VSY +++ +
Sbjct: 579 IFNKITKKDVASWNTMILGYGMHGQIDIAFELFELMKGDGLDYDHVSYIAVLAACSHGGL 638
Query: 136 WREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWEC 174
+ + F M + P ++ A ++ G + +C
Sbjct: 639 VDKGKKYFSQMVAQNIEPQQMHYACMVDLLGRAGQLSKC 677
Score = 40.4 bits (93), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 46/230 (20%), Positives = 95/230 (41%), Gaps = 28/230 (12%)
Query: 379 MQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKE- 437
++ R + W+++ + P+ AL +++ M+ + V+P++ T A A++ E
Sbjct: 77 LRLRSAFLWNSLSRALSSASLPSEALRVYNLMLRSAVRPDDRTFPFALHAAAAAVASAED 136
Query: 438 -GRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICG 496
G H L + ++ YA CG A VF + +R V WN+++
Sbjct: 137 KGLELHASALRRGHLADVFTGNTLVAFYAACGKACDARRVFDEMPER--DVVSWNSLVSA 194
Query: 497 LAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTC-----------CHAGLVDLGERYF 545
++G + + + + LN + + V+ C HA V +G
Sbjct: 195 FLVNGMFHDARRALVSMMRSGFPLNVASLVSVVPACGTEQEEKFGLSIHALAVKVG---L 251
Query: 546 KSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGT 595
+M ++ N +VD+ G+ G +E + +V M ++ + V W +
Sbjct: 252 NTMVNLAN---------ALVDMYGKFGDVEASMQVFDGM-LEQNEVSWNS 291
>gi|224135349|ref|XP_002322051.1| predicted protein [Populus trichocarpa]
gi|222869047|gb|EEF06178.1| predicted protein [Populus trichocarpa]
Length = 924
Score = 301 bits (771), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 192/641 (29%), Positives = 310/641 (48%), Gaps = 98/641 (15%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+ +V+ L C+ V G IH L K GL + N+++ +Y+KCG
Sbjct: 249 VTVVTILPVCAGEGEVDIGMGIHGLAVKLGLSEEVMVNNAMVYMYSKCGY---------- 298
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
LN+A+ F K K VS+ +MI F+ EA +
Sbjct: 299 ---------------------LNEAQMSFVKNNNKNVVSWNTMISAFSLEGDVNEAFNLL 337
Query: 144 RDMRILG--VIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYC 201
++M+I G + NEVT+ +V+ + + + + LHG +
Sbjct: 338 QEMQIQGEEMKANEVTILNVLPACLDKLQLRSLKELHGYSFRH----------------- 380
Query: 202 VCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDG 261
C VE N + +AK G + A ++F I K V SW +I G
Sbjct: 381 -CFQHVELS--------------NAFILAYAKCGALNSAEKVFHGIGDKTVSSWNALIGG 425
Query: 262 YLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCY 321
+ Q +AL + M G P+ I L+ AC + G +IH +++ G +
Sbjct: 426 HAQNGDPRKALHLLFQMTYSGQQPDWFTISSLLLACAHLKSLQYGKEIHGYVLRNGLETD 485
Query: 322 DFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQK 381
F+ +++ Y CG+ + AR+ LF+ M+
Sbjct: 486 FFVGTSLLSHYIHCGKASSARV-------------------------------LFDRMKD 514
Query: 382 RDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWA 441
+++ SW+AMISGY+QN P +L LF + G++ +EI +VSVF A + L+ G+ A
Sbjct: 515 KNLVSWNAMISGYSQNGLPYESLALFRKSLSEGIQSHEIAIVSVFGACSQLSALRLGKEA 574
Query: 442 HEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHG 501
H YVL T + + +IIDMYAK G I + +VF ++D+ +V+ WNAII +HG
Sbjct: 575 HGYVLKALQTEDAFVGCSIIDMYAKSGCIKESRKVFDGLKDK--NVASWNAIIVAHGIHG 632
Query: 502 DANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHY 561
+++Y ++K + T+IG+L C HAGLV+ G +YFK M++ +EP L+HY
Sbjct: 633 HGKEAIELYERMKKVGQMPDRFTYIGILMACGHAGLVEEGLKYFKEMQNFNLIEPKLEHY 692
Query: 562 GCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQP 621
C++D+L RAG+L+DA ++ MP +AD IW +LL + R G +E+GE+ AK L L+P
Sbjct: 693 ACLIDMLARAGRLDDALRLVNEMPEEADNRIWSSLLRSCRTFGALEIGEKVAKKLLELEP 752
Query: 622 SHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
+ VLLSN+YA G+W+ +R+ M++ G+++ G S
Sbjct: 753 DKAENYVLLSNLYAGLGKWDGVRRVRQMMKEIGLQKDAGCS 793
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 156/727 (21%), Positives = 292/727 (40%), Gaps = 161/727 (22%)
Query: 11 NSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNS-LINLYA 69
+SQ A + + A+ L+ C + G+++H + S N ++ N+ LI +YA
Sbjct: 31 HSQNAAFISLQAKEAIGLLLQACGNQKDIETGRRLHKFVSDSTHYRNDYVLNTRLIKMYA 90
Query: 70 KCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMG 129
CG P+ D+R VFD K + + +++ G
Sbjct: 91 MCG---------------SPL----------------DSRLVFDNMETKNLIQWNALVSG 119
Query: 130 FAQNDCWREALEVFRDM-RILGVIPNEVTLASVISSSVHLGGIWECRM---LHGLVIKLM 185
+ +N + + ++VF D+ P+ T SVI + GGI + R+ +HG+VIK+
Sbjct: 120 YTRNGLYGDVVKVFMDLVSDTDFQPDNFTFPSVIKAC---GGILDVRLGEVIHGMVIKMG 176
Query: 186 IDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFE 245
+ V + L+ MY C G V+ A ++F+
Sbjct: 177 LVLDVFVGNALVGMYGKC-------------------------------GAVDEAMKVFD 205
Query: 246 RIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCD-GIAPNDVMIVDLISACGRAMAFG 304
+P ++VSW +MI + + ++ + ML + G+ P+ V +V ++ C
Sbjct: 206 FMPETNLVSWNSMICAFSENGFSRDSFDLLMEMLGEEGLLPDVVTVVTILPVCAGEGEVD 265
Query: 305 EGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFI 364
G+ IH + VK G + +++ Y+ CG +N A++ F ++ SWN +I+ F
Sbjct: 266 IGMGIHGLAVKLGLSEEVMVNNAMVYMYSKCGYLNEAQMSFVKNNNKNVVSWNTMISAFS 325
Query: 365 RNGMIEDARQLFNNMQ----------------------------KRDVYSWS-------- 388
G + +A L MQ ++++ +S
Sbjct: 326 LEGDVNEAFNLLQEMQIQGEEMKANEVTILNVLPACLDKLQLRSLKELHGYSFRHCFQHV 385
Query: 389 ----AMISGYAQNEQPNMALELFHGMVD-------------------------------A 413
A I YA+ N A ++FHG+ D +
Sbjct: 386 ELSNAFILAYAKCGALNSAEKVFHGIGDKTVSSWNALIGGHAQNGDPRKALHLLFQMTYS 445
Query: 414 GVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTA 473
G +P+ T+ S+ A A +L+ G+ H YVL N + + + +++ Y CG ++A
Sbjct: 446 GQQPDWFTISSLLLACAHLKSLQYGKEIHGYVLRNGLETDFFVGTSLLSHYIHCGKASSA 505
Query: 474 FEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCC 533
+F ++D+ ++ WNA+I G + +G +L ++ I+ + I + V C
Sbjct: 506 RVLFDRMKDK--NLVSWNAMISGYSQNGLPYESLALFRKSLSEGIQSHEIAIVSVFGACS 563
Query: 534 HAGLVDLGERYFKSMKSVYNVEPDLKHYGC-MVDLLGRAGQLEDAEEVIRSMPMKADVVI 592
+ LG+ + E GC ++D+ ++G ++++ +V + K +V
Sbjct: 564 QLSALRLGKEAHGYVLKALQTEDAF--VGCSIIDMYAKSGCIKESRKVFDGLKDK-NVAS 620
Query: 593 WGTLLAASRIHGN----VEVGERAAKSLAGLQPSHGPSRVLLSNIY---ADAGRWEDAFS 645
W ++ A IHG+ +E+ ER K P R I AG E+
Sbjct: 621 WNAIIVAHGIHGHGKEAIELYERMKK------VGQMPDRFTYIGILMACGHAGLVEEGLK 674
Query: 646 IRKEMRD 652
KEM++
Sbjct: 675 YFKEMQN 681
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 141/616 (22%), Positives = 255/616 (41%), Gaps = 155/616 (25%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E+ +++ L C + + +++H F+ + + + N+ I YAKCG ++ A+ +F
Sbjct: 351 EVTILNVLPACLDKLQLRSLKELHGYSFRHCFQ-HVELSNAFILAYAKCGALNSAEKVFH 409
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+ DKT S+ ++I G AQN R+AL +
Sbjct: 410 G---------------------------IGDKT----VSSWNALIGGHAQNGDPRKALHL 438
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
M G P+ T++S++ + HL + + +HG V++ ++ + T+LL+ Y
Sbjct: 439 LFQMTYSGQQPDWFTISSLLLACAHLKSLQYGKEIHGYVLRNGLETDFFVGTSLLSHYIH 498
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
C AR LFD MK++N+VSWN M++G+++ GL
Sbjct: 499 CGKASSARVLFDRMKDKNLVSWNAMISGYSQNGLP------------------------- 533
Query: 263 LQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD 322
E+L ++R L +GI +++ IV + AC + A G + H ++KA
Sbjct: 534 ------YESLALFRKSLSEGIQSHEIAIVSVFGACSQLSALRLGKEAHGYVLKALQTEDA 587
Query: 323 FIQATIIHFYAACGRINLARLQFELGIKD-HIASWNALIAGFIRNGMIEDARQLFNNMQK 381
F+ +II YA G I +R F+ G+KD ++ASWNA+I +G ++A +L+ M+K
Sbjct: 588 FVGCSIIDMYAKSGCIKESRKVFD-GLKDKNVASWNAIIVAHGIHGHGKEAIELYERMKK 646
Query: 382 RDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG-RW 440
G P+ T + + A +G ++EG ++
Sbjct: 647 -------------------------------VGQMPDRFTYIGILMACGHAGLVEEGLKY 675
Query: 441 AHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMH 500
E N I A +IDM A+ G ++ A + + + +
Sbjct: 676 FKEMQNFNLIEPKLEHYACLIDMLARAGRLDDALRLVNEMPEEADN-------------- 721
Query: 501 GDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPD-LK 559
+I+S L L +C G +++GE K K + +EPD +
Sbjct: 722 -------RIWSSL---------------LRSCRTFGALEIGE---KVAKKLLELEPDKAE 756
Query: 560 HYGCMVDL---LGRAGQLEDAEEVIRSMPMKADV-VIWGTLLAASRIHGNVEVGERAAKS 615
+Y + +L LG+ + ++++ + ++ D W +EVG R
Sbjct: 757 NYVLLSNLYAGLGKWDGVRRVRQMMKEIGLQKDAGCSW------------IEVGGRVYSF 804
Query: 616 LAG--LQPSHGPSRVL 629
+ G LQP RV+
Sbjct: 805 VVGDSLQPKSAEIRVI 820
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 101/240 (42%), Gaps = 47/240 (19%)
Query: 22 YELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMF 81
+E+A+VS CS A+ G++ H + K+ + F+ S+I++YAK G I +
Sbjct: 551 HEIAIVSVFGACSQLSALRLGKEAHGYVLKALQTEDAFVGCSIIDMYAKSGCIKE----- 605
Query: 82 DSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALE 141
+R+VFD K S+ ++I+ + +EA+E
Sbjct: 606 --------------------------SRKVFDGLKDKNVASWNAIIVAHGIHGHGKEAIE 639
Query: 142 VFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYC 201
++ M+ +G +P+ T ++ + H G + E GL + F +I L + C
Sbjct: 640 LYERMKKVGQMPDRFTYIGILMACGHAGLVEE-----GLKYFKEMQNFNLIEPKLEHYAC 694
Query: 202 VCSSLVEARSLFDEMKERNIVS-------WNVMLNGFAKAGLVEL----ARELFERIPSK 250
+ L A L D ++ N + W+ +L G +E+ A++L E P K
Sbjct: 695 LIDMLARAGRLDDALRLVNEMPEEADNRIWSSLLRSCRTFGALEIGEKVAKKLLELEPDK 754
>gi|125546973|gb|EAY92795.1| hypothetical protein OsI_14599 [Oryza sativa Indica Group]
Length = 530
Score = 301 bits (770), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 155/447 (34%), Positives = 252/447 (56%), Gaps = 8/447 (1%)
Query: 225 NVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIA 284
+L+ +A G + AR LF+ +P + +V M ++ + ++A+ ++ M+ DG+
Sbjct: 49 TALLSAYAALGSPDHARRLFDEMPEQGLVPRTAMARAHVASGQAAQAIAVFGDMVADGVF 108
Query: 285 PNDVMIVDLISACGRAMAF----GEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINL 340
P++V + + AC A ++ G IH+++V +G F+ +I Y G + +
Sbjct: 109 PDNVAVAVALGACHGAGSWTARRNPGKMIHALVVTSGIVPDVFVSTELIRVYGESGELPV 168
Query: 341 ARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQP 400
+R F+ +WNA++ + R+G ++ A ++F M +RDV SW+ +++GY +
Sbjct: 169 SRRVFDDMPSRSTITWNAMLHQYARHGKVDTAYEMFLAMPRRDVVSWNTVLAGYCVAGRC 228
Query: 401 NMALELFHGMVDA---GVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLS 457
AL LF MV V PN TM ++ A A +G L+ G W H Y+ N + + L
Sbjct: 229 REALGLFRQMVSPSSCAVHPNVPTMSTILGACAGAGCLETGIWVHAYIERNRMNDDGYLD 288
Query: 458 AAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRN 517
+IDMY KCGSI+ A +VF R + W +ICGLAMHG L+++ ++
Sbjct: 289 RCLIDMYCKCGSIDNALQVFEKA-PRKKDLFSWTTVICGLAMHGRTTDALRMFDMMQDNG 347
Query: 518 IKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDA 577
I + +T +GVL+ C H GLVD G YF SM++ + + P ++HYGCM+DLLGR G+L++A
Sbjct: 348 ICPDDVTLVGVLNACAHGGLVDEGLGYFYSMEAKFRITPKIEHYGCMIDLLGRIGRLQEA 407
Query: 578 EEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADA 637
+IR+MPM + VIWG L+A ++HGN+E+G+ AA+ L L P RV+LS++YA A
Sbjct: 408 YSMIRTMPMDPNTVIWGAFLSACKVHGNMELGKIAAEELTRLDPDDPWGRVMLSSMYAKA 467
Query: 638 GRWEDAFSIRKEMRDCGMKRLPGFSGV 664
W R+EM +K+ PG S +
Sbjct: 468 QDWIGLARERREMNSMQVKKTPGCSSI 494
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 117/426 (27%), Positives = 192/426 (45%), Gaps = 53/426 (12%)
Query: 95 MISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPN 154
++S Y + AR +FD+ P + V T+M + +A+ VF DM GV P+
Sbjct: 51 LLSAYAALGSPDHARRLFDEMPEQGLVPRTAMARAHVASGQAAQAIAVFGDMVADGVFPD 110
Query: 155 EVTLASVISSSVHLGGIWECR-----MLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
V +A V + H G W R M+H LV+ I V +ST L+ +Y L +
Sbjct: 111 NVAVA-VALGACHGAGSWTARRNPGKMIHALVVTSGIVPDVFVSTELIRVYGESGELPVS 169
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLS 269
R +FD+M R+ ++WN ML+ +A+ G V+ A E+F +P +DVVSW T++ GY R
Sbjct: 170 RRVFDDMPSRSTITWNAMLHQYARHGKVDTAYEMFLAMPRRDVVSWNTVLAGYCVAGRCR 229
Query: 270 EALTMYRAMLCD---GIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQA 326
EAL ++R M+ + PN + ++ AC A G+ +H+ I + + ++
Sbjct: 230 EALGLFRQMVSPSSCAVHPNVPTMSTILGACAGAGCLETGIWVHAYIERNRMNDDGYLDR 289
Query: 327 TIIHFYAACGRINLARLQFELGI-KDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVY 385
+I Y CG I+ A FE K + SW +I G +G DA ++F+ MQ
Sbjct: 290 CLIDMYCKCGSIDNALQVFEKAPRKKDLFSWTTVICGLAMHGRTTDALRMFDMMQ----- 344
Query: 386 SWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYV 445
D G+ P+++T+V V A A G + EG + Y
Sbjct: 345 --------------------------DNGICPDDVTLVGVLNACAHGGLVDEG-LGYFYS 377
Query: 446 LNNSITLNDNLS--AAIIDMYAKCGSINTAFEVFYHIRDRTTSVSP----WNAIICGLAM 499
+ + + +ID+ + G + A+ + RT + P W A + +
Sbjct: 378 MEAKFRITPKIEHYGCMIDLLGRIGRLQEAYSMI-----RTMPMDPNTVIWGAFLSACKV 432
Query: 500 HGDANL 505
HG+ L
Sbjct: 433 HGNMEL 438
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 129/273 (47%), Gaps = 41/273 (15%)
Query: 42 GQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIR 101
G+ IH+L+ SG+ + F+ LI +Y + G + ++ +FD + + N M+ Y R
Sbjct: 134 GKMIHALVVTSGIVPDVFVSTELIRVYGESGELPVSRRVFDDMPSRSTITWNAMLHQYAR 193
Query: 102 NDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDM---RILGVIPNEVTL 158
+ +++ A E+F P + VS+ +++ G+ REAL +FR M V PN T+
Sbjct: 194 HGKVDTAYEMFLAMPRRDVVSWNTVLAGYCVAGRCREALGLFRQMVSPSSCAVHPNVPTM 253
Query: 159 ASVISSSVHLG----GIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFD 214
++++ + G GIW +H + + ++ + L++MYC C S+ A +F+
Sbjct: 254 STILGACAGAGCLETGIW----VHAYIERNRMNDDGYLDRCLIDMYCKCGSIDNALQVFE 309
Query: 215 EMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTM 274
+ + ++LF SW T+I G R ++AL M
Sbjct: 310 KAPRK---------------------KDLF---------SWTTVICGLAMHGRTTDALRM 339
Query: 275 YRAMLCDGIAPNDVMIVDLISACGRAMAFGEGL 307
+ M +GI P+DV +V +++AC EGL
Sbjct: 340 FDMMQDNGICPDDVTLVGVLNACAHGGLVDEGL 372
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 100/236 (42%), Gaps = 39/236 (16%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
L C+ + G +H+ I ++ + + ++ LI++Y KCG I
Sbjct: 257 LGACAGAGCLETGIWVHAYIERNRMNDDGYLDRCLIDMYCKCGSI--------------- 301
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKC-CVSYTSMIMGFAQNDCWREALEVFRDMRI 148
++A +VF+K P K S+T++I G A + +AL +F M+
Sbjct: 302 ----------------DNALQVFEKAPRKKDLFSWTTVICGLAMHGRTTDALRMFDMMQD 345
Query: 149 LGVIPNEVTLASVISSSVHLGGIWE-CRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLV 207
G+ P++VTL V+++ H G + E + + K I + ++++ L
Sbjct: 346 NGICPDDVTLVGVLNACAHGGLVDEGLGYFYSMEAKFRITPKIEHYGCMIDLLGRIGRLQ 405
Query: 208 EARSLFDEMK-ERNIVSWNVMLNGFAKAGLVELAR---ELFERIPSKDVVSWGTMI 259
EA S+ M + N V W L+ G +EL + E R+ D WG ++
Sbjct: 406 EAYSMIRTMPMDPNTVIWGAFLSACKVHGNMELGKIAAEELTRLDPDD--PWGRVM 459
>gi|225444209|ref|XP_002270866.1| PREDICTED: pentatricopeptide repeat-containing protein At1g50270
[Vitis vinifera]
gi|296089231|emb|CBI39003.3| unnamed protein product [Vitis vinifera]
Length = 601
Score = 301 bits (770), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 159/441 (36%), Positives = 243/441 (55%), Gaps = 34/441 (7%)
Query: 225 NVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIA 284
N +++ FA G V+ +R LF KDVVSW +I+G L+ R EAL + M G+
Sbjct: 142 NSLVSAFAHCGYVDCSRRLFIETAKKDVVSWTALINGCLRNGRAVEALECFVEMRSSGVE 201
Query: 285 PNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD-FIQATIIHFYAACGRINLARL 343
++V +V ++ A G +H V++G +D ++ + ++ Y+ CG
Sbjct: 202 VDEVTVVSVLCAAAMLRDVWFGRWVHGFYVESGRVIWDVYVGSALVDMYSKCG------- 254
Query: 344 QFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMA 403
+DA ++FN M R++ SW A+I+GY Q + A
Sbjct: 255 ------------------------YCDDAVKVFNEMPTRNLVSWGALIAGYVQCNRYKEA 290
Query: 404 LELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDM 463
L++F M+ G++PN+ T+ S A A G+L +GRW HEYV + + LN L A++DM
Sbjct: 291 LKVFQEMIIEGIEPNQSTVTSALTACAQLGSLDQGRWLHEYVDRSKLGLNSKLGTALVDM 350
Query: 464 YAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSI 523
Y+KCG ++ A VF + + V PW A+I GLAM GDA +L ++S + + ++ N +
Sbjct: 351 YSKCGCVDEALLVFEKLPAK--DVYPWTAMINGLAMRGDALSSLNLFSQMIRSRVQPNGV 408
Query: 524 TFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRS 583
TF+GVLS C H GLVD G F+ M Y +EP++ HYGCMVDLLGRAG+LE+A + I S
Sbjct: 409 TFLGVLSACAHGGLVDEGLELFRLMICDYRLEPNVDHYGCMVDLLGRAGRLEEAIKFIES 468
Query: 584 MPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDA 643
MPM+ +WG L + IH E+GE L LQP H +LL+N+Y+ +WE A
Sbjct: 469 MPMEPTPGVWGALFSGCMIHKAFELGEHIGNHLIKLQPHHSGRYILLANLYSRCQKWEAA 528
Query: 644 FSIRKEMRDCGMKRLPGFSGV 664
++R+ M+ G+ + P S +
Sbjct: 529 ANVRRLMKGKGVDKSPACSWI 549
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 114/461 (24%), Positives = 195/461 (42%), Gaps = 100/461 (21%)
Query: 44 QIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRND 103
Q ++ I K GL+ + F+QNSL++ +A CG + CS
Sbjct: 124 QFYAHIVKFGLDFDAFVQNSLVSAFAHCGYVD--------CS------------------ 157
Query: 104 RLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVIS 163
R +F +T K VS+T++I G +N EALE F +MR GV +EVT+ SV+
Sbjct: 158 -----RRLFIETAKKDVVSWTALINGCLRNGRAVEALECFVEMRSSGVEVDEVTVVSVLC 212
Query: 164 SSVHLGGIWECRMLHGLVI---KLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERN 220
++ L +W R +HG + +++ D V + + L++MY C +A +F+EM RN
Sbjct: 213 AAAMLRDVWFGRWVHGFYVESGRVIWD--VYVGSALVDMYSKCGYCDDAVKVFNEMPTRN 270
Query: 221 IVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLC 280
+VSW G +I GY+Q R EAL +++ M+
Sbjct: 271 LVSW-------------------------------GALIAGYVQCNRYKEALKVFQEMII 299
Query: 281 DGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINL 340
+GI PN + ++AC + + +G +H + ++ + ++ Y+ CG ++
Sbjct: 300 EGIEPNQSTVTSALTACAQLGSLDQGRWLHEYVDRSKLGLNSKLGTALVDMYSKCGCVDE 359
Query: 341 ARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQP 400
A L FE + W A+I G G D S
Sbjct: 360 ALLVFEKLPAKDVYPWTAMINGLAMRG---------------DALS-------------- 390
Query: 401 NMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVL-NNSITLNDNLSAA 459
+L LF M+ + V+PN +T + V A A G + EG ++ + + N +
Sbjct: 391 --SLNLFSQMIRSRVQPNGVTFLGVLSACAHGGLVDEGLELFRLMICDYRLEPNVDHYGC 448
Query: 460 IIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMH 500
++D+ + G + A + F + W A+ G +H
Sbjct: 449 MVDLLGRAGRLEEAIK-FIESMPMEPTPGVWGALFSGCMIH 488
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 144/299 (48%), Gaps = 43/299 (14%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSG-LESNTFIQNSLINLYAKCGLISQAKSMF 81
E+ +VS L + V G+ +H +SG + + ++ ++L+++Y+KCG
Sbjct: 204 EVTVVSVLCAAAMLRDVWFGRWVHGFYVESGRVIWDVYVGSALVDMYSKCGYC------- 256
Query: 82 DSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALE 141
+DA +VF++ P + VS+ ++I G+ Q + ++EAL+
Sbjct: 257 ------------------------DDAVKVFNEMPTRNLVSWGALIAGYVQCNRYKEALK 292
Query: 142 VFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYC 201
VF++M I G+ PN+ T+ S +++ LG + + R LH V + + + T L++MY
Sbjct: 293 VFQEMIIEGIEPNQSTVTSALTACAQLGSLDQGRWLHEYVDRSKLGLNSKLGTALVDMYS 352
Query: 202 VCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDG 261
C + EA +F+++ +++ W M+NG A G + LF ++ V G G
Sbjct: 353 KCGCVDEALLVFEKLPAKDVYPWTAMINGLAMRGDALSSLNLFSQMIRSRVQPNGVTFLG 412
Query: 262 YLQV----ERLSEALTMYRAMLCD-GIAPN---DVMIVDLISACGR---AMAFGEGLQI 309
L + E L ++R M+CD + PN +VDL+ GR A+ F E + +
Sbjct: 413 VLSACAHGGLVDEGLELFRLMICDYRLEPNVDHYGCMVDLLGRAGRLEEAIKFIESMPM 471
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/292 (20%), Positives = 130/292 (44%), Gaps = 30/292 (10%)
Query: 375 LFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEIT---MVSVFCAIAS 431
LF+ + ++ W+ ++ ++ + QP M L + + + GV P+ T ++ F + +
Sbjct: 60 LFDRLATPYIFLWNTIVRSFSASSQPQMVLVAYSRLRNHGVIPDRHTFPLLLKAFSKLRN 119
Query: 432 SGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWN 491
+ + +++ + + + +++ +A CG ++ + +F I V W
Sbjct: 120 ENPFQ----FYAHIVKFGLDFDAFVQNSLVSAFAHCGYVDCSRRLF--IETAKKDVVSWT 173
Query: 492 AIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSV 551
A+I G +G A L+ + ++ ++++ +T + VL C A L D+ +F
Sbjct: 174 ALINGCLRNGRAVEALECFVEMRSSGVEVDEVTVVSVL--CAAAMLRDV---WFGRWVHG 228
Query: 552 YNVEP-----DLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAA----SRI 602
+ VE D+ +VD+ + G +DA +V MP + ++V WG L+A +R
Sbjct: 229 FYVESGRVIWDVYVGSALVDMYSKCGYCDDAVKVFNEMPTR-NLVSWGALIAGYVQCNRY 287
Query: 603 HGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYA----DAGRWEDAFSIRKEM 650
++V + + G++P+ L+ D GRW + R ++
Sbjct: 288 KEALKVFQEMI--IEGIEPNQSTVTSALTACAQLGSLDQGRWLHEYVDRSKL 337
>gi|224120094|ref|XP_002331135.1| predicted protein [Populus trichocarpa]
gi|222872863|gb|EEF09994.1| predicted protein [Populus trichocarpa]
Length = 799
Score = 301 bits (770), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 194/645 (30%), Positives = 308/645 (47%), Gaps = 104/645 (16%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
L+ CSA S+G++IH I + LESN ++ +L++ YAKCG
Sbjct: 126 LKACSALKEASEGREIHCDIKRLRLESNVYVSTALVDFYAKCGC---------------- 169
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQND-CWREALEVFRDMRI 148
L+DA+EVFDK + V++ SMI GF+ ++ + E + M+
Sbjct: 170 ---------------LDDAKEVFDKMHKRDVVAWNSMISGFSLHEGSYDEVARLLVQMQN 214
Query: 149 LGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVE 208
V PN T+ V+ + + + + +HG ++ G V++ T +L++Y C +
Sbjct: 215 -DVSPNSSTIVGVLPAVAQVNSLRHGKEIHGFCVRRGFVGDVVVGTGILDVYGKCQCIDY 273
Query: 209 ARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERL 268
AR +FD M G+V K+ V+W M+ Y+ + +
Sbjct: 274 ARRIFDMM------------------GIV------------KNEVTWSAMVGAYVVCDFM 303
Query: 269 SEALTMYRAMLC---DGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQ 325
EAL ++ +L D I + V + +I C G +H +K+GF +
Sbjct: 304 REALELFCQLLMLKDDVIVLSAVTLATVIRVCANLTDLSTGTCLHCYAIKSGFVLDLMVG 363
Query: 326 ATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVY 385
T++ YA CG IN A + FN M RD
Sbjct: 364 NTLLSMYAKCGIIN-------------------------------GAMRFFNEMDLRDAV 392
Query: 386 SWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYV 445
S++A+ISGY QN L +F M +G+ P + T+ SV A A L G +H Y
Sbjct: 393 SFTAIISGYVQNGNSEEGLRMFLEMQLSGINPEKATLASVLPACAHLAGLHYGSCSHCYA 452
Query: 446 LNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANL 505
+ T + + A+IDMYAKCG I+TA +VF + R + WN +I +HG
Sbjct: 453 IICGFTADTMICNALIDMYAKCGKIDTARKVFDRMHKR--GIVSWNTMIIAYGIHGIGLE 510
Query: 506 TLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMV 565
L ++ +++ +K + +TFI ++S C H+GLV G+ +F +M + + P ++HY CMV
Sbjct: 511 ALLLFDNMQSEGLKPDDVTFICLISACSHSGLVAEGKYWFNAMTQDFGIIPRMEHYACMV 570
Query: 566 DLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGP 625
DLL RAG ++ I MP++ DV +WG LL+A R++ NVE+GE +K + L P
Sbjct: 571 DLLSRAGLFKEVHSFIEKMPLEPDVRVWGALLSACRVYKNVELGEGVSKKIQKLGPESTG 630
Query: 626 SRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPG-----FSGVV 665
+ VLLSN+Y+ GRW+DA +R ++ G ++ PG SGVV
Sbjct: 631 NFVLLSNMYSAVGRWDDAAQVRFTQKEQGFEKSPGCSWIEISGVV 675
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 142/568 (25%), Positives = 250/568 (44%), Gaps = 84/568 (14%)
Query: 47 SLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLN 106
+++ +S ++S + + LI+ + L+ ++ T V ++ YI L
Sbjct: 13 TVLLESCIQSKSLFRGKLIHQH----LLKCLHRTHETNLTNFDVPFEKLVDLYIACSELK 68
Query: 107 DAREVFDKTP--IKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISS 164
AR VFDK P K V + +I +A N + EA++++ M G+ PN T V+ +
Sbjct: 69 IARHVFDKMPHRPKNVVLWNLLIRAYAWNGPYEEAIDLYYKMLGYGITPNRFTFPFVLKA 128
Query: 165 SVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSW 224
L E R +H + +L ++ V +ST L++ Y C L +A+ +FD+M +R++V+W
Sbjct: 129 CSALKEASEGREIHCDIKRLRLESNVYVSTALVDFYAKCGCLDDAKEVFDKMHKRDVVAW 188
Query: 225 NVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIA 284
N M++GF+ L E Y +V RL + + ++
Sbjct: 189 NSMISGFS----------LHE--------------GSYDEVARLLVQMQ-------NDVS 217
Query: 285 PNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQ 344
PN IV ++ A + + G +IH V+ GF + I+ Y C I+ AR
Sbjct: 218 PNSSTIVGVLPAVAQVNSLRHGKEIHGFCVRRGFVGDVVVGTGILDVYGKCQCIDYARRI 277
Query: 345 FE-LGIKDHIASWNALIAGFIRNGMIEDARQLFNN--MQKRDVYSWSAMISGYAQNEQPN 401
F+ +GI + +W+A++ ++ + +A +LF M K DV SA
Sbjct: 278 FDMMGIVKNEVTWSAMVGAYVVCDFMREALELFCQLLMLKDDVIVLSA------------ 325
Query: 402 MALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAII 461
+T+ +V A+ L G H Y + + L+ + ++
Sbjct: 326 ------------------VTLATVIRVCANLTDLSTGTCLHCYAIKSGFVLDLMVGNTLL 367
Query: 462 DMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLN 521
MYAKCG IN A F++ D +VS + AII G +G++ L+++ +++ I
Sbjct: 368 SMYAKCGIINGAMR-FFNEMDLRDAVS-FTAIISGYVQNGNSEEGLRMFLEMQLSGINPE 425
Query: 522 SITFIGVLSTCCH-AGLVDLGERYFKSMKSVYNV----EPDLKHYGCMVDLLGRAGQLED 576
T VL C H AGL ++ S Y + D ++D+ + G+++
Sbjct: 426 KATLASVLPACAHLAGL------HYGSCSHCYAIICGFTADTMICNALIDMYAKCGKIDT 479
Query: 577 AEEVIRSMPMKADVVIWGTLLAASRIHG 604
A +V M K +V W T++ A IHG
Sbjct: 480 ARKVFDRMH-KRGIVSWNTMIIAYGIHG 506
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 119/283 (42%), Gaps = 62/283 (21%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+ L + +R C+ +S G +H KSG + + N+L+++YAKCG+I+ A F+
Sbjct: 326 VTLATVIRVCANLTDLSTGTCLHCYAIKSGFVLDLMVGNTLLSMYAKCGIINGAMRFFNE 385
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
D V+ +ISGY+ QN E L +F
Sbjct: 386 MDLRDAVSFTAIISGYV-------------------------------QNGNSEEGLRMF 414
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
+M++ G+ P + TLASV+ + HL G+ H I +I L++MY C
Sbjct: 415 LEMQLSGINPEKATLASVLPACAHLAGLHYGSCSHCYAIICGFTADTMICNALIDMYAKC 474
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYL 263
+ AR +FD M +R IVSWN M+ + G+
Sbjct: 475 GKIDTARKVFDRMHKRGIVSWNTMIIAYGIHGIG-------------------------- 508
Query: 264 QVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEG 306
EAL ++ M +G+ P+DV + LISAC + EG
Sbjct: 509 -----LEALLLFDNMQSEGLKPDDVTFICLISACSHSGLVAEG 546
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 104/460 (22%), Positives = 197/460 (42%), Gaps = 68/460 (14%)
Query: 192 ISTNLLNMYC--VCSSLVEARSLF-------------DEMKERNIVSWNV----MLNGFA 232
+ T L YC + S ++++SLF E N+ +++V +++ +
Sbjct: 3 LRTRLSLEYCTVLLESCIQSKSLFRGKLIHQHLLKCLHRTHETNLTNFDVPFEKLVDLYI 62
Query: 233 KAGLVELARELFERIP--SKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMI 290
+++AR +F+++P K+VV W +I Y EA+ +Y ML GI PN
Sbjct: 63 ACSELKIARHVFDKMPHRPKNVVLWNLLIRAYAWNGPYEEAIDLYYKMLGYGITPNRFTF 122
Query: 291 VDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIK 350
++ AC EG +IH I + + ++ ++ FYA CG ++ A+ F+ K
Sbjct: 123 PFVLKACSALKEASEGREIHCDIKRLRLESNVYVSTALVDFYAKCGCLDDAKEVFDKMHK 182
Query: 351 DHIASWNALIAGF-IRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHG 409
+ +WN++I+GF + G ++ +L MQ
Sbjct: 183 RDVVAWNSMISGFSLHEGSYDEVARLLVQMQN---------------------------- 214
Query: 410 MVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGS 469
V PN T+V V A+A +L+ G+ H + + + + I+D+Y KC
Sbjct: 215 ----DVSPNSSTIVGVLPAVAQVNSLRHGKEIHGFCVRRGFVGDVVVGTGILDVYGKCQC 270
Query: 470 INTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSD---LEKRNIKLNSITFI 526
I+ A +F + V+ W+A++ + L+++ L+ I L+++T
Sbjct: 271 IDYARRIFDMMGIVKNEVT-WSAMVGAYVVCDFMREALELFCQLLMLKDDVIVLSAVTLA 329
Query: 527 GVLSTCCHAGLVDLGE---RYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRS 583
V+ C A L DL + ++KS + + DL ++ + + G + A
Sbjct: 330 TVIRVC--ANLTDLSTGTCLHCYAIKSGFVL--DLMVGNTLLSMYAKCGIINGAMRFFNE 385
Query: 584 MPMKADVVIWGTLLAASRIHGNVEVGERA--AKSLAGLQP 621
M ++ D V + +++ +GN E G R L+G+ P
Sbjct: 386 MDLR-DAVSFTAIISGYVQNGNSEEGLRMFLEMQLSGINP 424
>gi|302754942|ref|XP_002960895.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
gi|300171834|gb|EFJ38434.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
Length = 903
Score = 301 bits (770), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 205/648 (31%), Positives = 315/648 (48%), Gaps = 112/648 (17%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+ LV AL C+ + Q Q IH ++ +SGLE + +L + YA+ G + QAK
Sbjct: 229 ITLVIALTVCAT---IRQAQAIHFIVRESGLEQTLVVSTALASAYARLGHLYQAK----- 280
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
EVFD+ + VS+ +M+ +AQ+ EA +F
Sbjct: 281 --------------------------EVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLF 314
Query: 144 RDMRILGVIPNEVTL--ASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYC 201
M G+ P++VTL AS SS+ G RM+HG ++ +D
Sbjct: 315 ARMLHEGISPSKVTLVNASTGCSSLRFG-----RMIHGCALEKGLD-------------- 355
Query: 202 VCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDG 261
R+IV N +L+ + + G E AR LF+RIP + VSW TMI G
Sbjct: 356 -----------------RDIVLGNALLDMYTRCGSPEEARHLFKRIPC-NAVSWNTMIAG 397
Query: 262 YLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACG----RAMAFGEGLQIHSIIVKAG 317
Q ++ A+ +++ M +G+AP ++L+ A A A EG ++HS IV G
Sbjct: 398 SSQKGQMKRAVELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAMAEGRKLHSRIVSCG 457
Query: 318 FDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFN 377
+ I ++ YA+CG I+ A F+ G +ED
Sbjct: 458 YASEPAIGTAVVKMYASCGAIDEAAASFQ-------------------RGAMED------ 492
Query: 378 NMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKE 437
+ DV SW+A+IS +Q+ AL F M GV PN+IT V+V A A + L E
Sbjct: 493 ---RHDVVSWNAIISSLSQHGHGKRALGFFRRMDLHGVAPNQITCVAVLDACAGAAALTE 549
Query: 438 GRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHI---RDRTTSVSPWNAII 494
G H+++ ++ + N ++ A+ MY +CGS+ +A E+F + RD V +NA+I
Sbjct: 550 GEIVHDHLRHSGMESNLFVATALASMYGRCGSLESAREIFEKVAVERD----VVIFNAMI 605
Query: 495 CGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNV 554
+ +G A LK++ +++ + + +F+ VLS C H GL D G F+SM+ Y +
Sbjct: 606 AAYSQNGLAGEALKLFWRMQQEGSRPDEQSFVSVLSACSHGGLADEGWEIFRSMRQSYGI 665
Query: 555 EPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAK 614
P HY C VD+LGRAG L DAEE+IR M +K V++W TLL A R + +V+ G A
Sbjct: 666 APSEDHYACAVDVLGRAGWLADAEELIRCMDVKPTVLVWKTLLGACRKYRDVDRGRLANS 725
Query: 615 SLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
+ L P + V+LSNI A AG+W++A +R EM G+++ G S
Sbjct: 726 MVRELDPGDESAYVVLSNILAGAGKWDEAAEVRTEMESRGLRKEAGKS 773
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 149/646 (23%), Positives = 262/646 (40%), Gaps = 142/646 (21%)
Query: 26 LVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCS 85
LV LR +SQG++IH+ I GLE + N L+ LY KC
Sbjct: 32 LVRLLRAAGDDRLLSQGRRIHARIVSLGLEEE--LGNHLLRLYLKC-------------- 75
Query: 86 TLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRD 145
+ L D EVF + ++ S+T++I + ++ + A+ +F
Sbjct: 76 -----------------ESLGDVEEVFSRLEVRDEASWTTIITAYTEHGQAKRAIGMFHR 118
Query: 146 MRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSS 205
M+ GV + VT +V+ + LG + + R +H +++ + G +++ LL++Y C
Sbjct: 119 MQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHAWIVESGLKGKSVLANLLLHIYGSCGC 178
Query: 206 LVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQV 265
+ A LF++M ER++VSWN + A++G + +A ELF+R
Sbjct: 179 VASAMLLFEKM-ERDLVSWNAAIAANAQSGDLGIALELFQR------------------- 218
Query: 266 ERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQ 325
M +G+ P + +V ++ C + IH I+ ++G + +
Sbjct: 219 ------------MQLEGVRPARITLVIALTVCA---TIRQAQAIHFIVRESGLEQTLVVS 263
Query: 326 ATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQK---- 381
+ YA G + A+ F+ + + SWNA++ + ++G + +A LF M
Sbjct: 264 TALASAYARLGHLYQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGIS 323
Query: 382 --------------------------------RDVYSWSAMISGYAQNEQPNMALEL--- 406
RD+ +A++ Y + P A L
Sbjct: 324 PSKVTLVNASTGCSSLRFGRMIHGCALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFKR 383
Query: 407 ---------------------------FHGMVDAGVKPNEITMVSVFCAIAS----SGTL 435
F M G+ P T +++ A+AS + +
Sbjct: 384 IPCNAVSWNTMIAGSSQKGQMKRAVELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAM 443
Query: 436 KEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYH--IRDRTTSVSPWNAI 493
EGR H +++ + A++ MYA CG+I+ A F + DR VS WNAI
Sbjct: 444 AEGRKLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVS-WNAI 502
Query: 494 ICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYN 553
I L+ HG L + ++ + N IT + VL C A + GE ++
Sbjct: 503 ISSLSQHGHGKRALGFFRRMDLHGVAPNQITCVAVLDACAGAAALTEGEIVHDHLRH-SG 561
Query: 554 VEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAA 599
+E +L + + GR G LE A E+ + ++ DVVI+ ++AA
Sbjct: 562 MESNLFVATALASMYGRCGSLESAREIFEKVAVERDVVIFNAMIAA 607
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 87/349 (24%), Positives = 150/349 (42%), Gaps = 43/349 (12%)
Query: 284 APNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARL 343
A +V L+ A G +G +IH+ IV G L
Sbjct: 26 ATRPAHLVRLLRAAGDDRLLSQGRRIHARIVSLG-------------------------L 60
Query: 344 QFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMA 403
+ ELG N L+ +++ + D ++F+ ++ RD SW+ +I+ Y ++ Q A
Sbjct: 61 EEELG--------NHLLRLYLKCESLGDVEEVFSRLEVRDEASWTTIITAYTEHGQAKRA 112
Query: 404 LELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDM 463
+ +FH M GV+ + +T ++V A A G L +GR H +++ + + L+ ++ +
Sbjct: 113 IGMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHAWIVESGLKGKSVLANLLLHI 172
Query: 464 YAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSI 523
Y CG + +A +F + S WNA I A GD + L+++ ++ ++ I
Sbjct: 173 YGSCGCVASAMLLFEKMERDLVS---WNAAIAANAQSGDLGIALELFQRMQLEGVRPARI 229
Query: 524 TFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRS 583
T + L+ C A + +F +S +E L + R G L A+EV
Sbjct: 230 TLVIALTVC--ATIRQAQAIHFIVRES--GLEQTLVVSTALASAYARLGHLYQAKEVF-D 284
Query: 584 MPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSN 632
+ DVV W +L A HG+ + E A L PS+V L N
Sbjct: 285 RAAERDVVSWNAMLGAYAQHGH--MSEAALLFARMLHEGISPSKVTLVN 331
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 73/139 (52%), Gaps = 6/139 (4%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
++ V+ L C+ A+++G+ +H + SG+ESN F+ +L ++Y +CG + A+ +F+
Sbjct: 531 QITCVAVLDACAGAAALTEGEIVHDHLRHSGMESNLFVATALASMYGRCGSLESAREIFE 590
Query: 83 SCST-LDPVACNIMISGYIRNDRLNDAREVFDKTPIKCC----VSYTSMIMGFAQNDCWR 137
+ D V N MI+ Y +N +A ++F + + S+ S++ +
Sbjct: 591 KVAVERDVVIFNAMIAAYSQNGLAGEALKLFWRMQQEGSRPDEQSFVSVLSACSHGGLAD 650
Query: 138 EALEVFRDMR-ILGVIPNE 155
E E+FR MR G+ P+E
Sbjct: 651 EGWEIFRSMRQSYGIAPSE 669
>gi|413916018|gb|AFW55950.1| hypothetical protein ZEAMMB73_919937 [Zea mays]
Length = 864
Score = 301 bits (770), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 181/638 (28%), Positives = 306/638 (47%), Gaps = 95/638 (14%)
Query: 25 ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSC 84
A SA R C+A +S +Q+H+ K+ S+ + +++++YAK G
Sbjct: 254 AYASAFRSCAAMPCLSTARQLHAHAIKNVFSSDRVVGTAIVDVYAKAG------------ 301
Query: 85 STLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFR 144
L DAR F P + +M++G + EA+++F+
Sbjct: 302 -------------------NLVDARRAFIGLPHHNVETCNAMMVGLVRTGLGAEAMQLFQ 342
Query: 145 DMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCS 204
M GV + ++L+ V S+ + G ++ +H L +K D V + +L++Y C
Sbjct: 343 FMTRSGVGFDVISLSGVFSACAEVKGYFQGLQVHCLAVKSGFDVDVCVRNAILDLYGKCK 402
Query: 205 SLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQ 264
+LVEA +F EM++R D VSW +I Q
Sbjct: 403 ALVEAYLVFQEMEQR-------------------------------DSVSWNAIIAALEQ 431
Query: 265 VERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFI 324
E + + ML G+ P+D ++ AC + GL +H +K+G F+
Sbjct: 432 NECYEDTIAHLNEMLRSGMEPDDFTYGSVLKACAGLQSLEYGLVVHGKAIKSGLGLDAFV 491
Query: 325 QATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDV 384
+T++ Y CG I +A++L + + +++
Sbjct: 492 SSTVVDMYCKCGAIT-------------------------------EAQKLHDRIGGQEL 520
Query: 385 YSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEY 444
SW+++ISG++ +Q A F M+D GVKP+ T +V A+ T++ G+ H
Sbjct: 521 VSWNSIISGFSLTKQSEEAQRFFSEMLDMGVKPDHFTYATVLDTCANLATIELGKQIHGQ 580
Query: 445 VLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDAN 504
++ + ++ +S+ ++DMYAKCG++ + +F + R WNA+ICG A+HG
Sbjct: 581 IIKQEMLGDEYISSTLVDMYAKCGNMPDSLLMFE--KARKLDFVSWNAMICGYALHGQGL 638
Query: 505 LTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCM 564
L+++ +++ N+ N TF+ VL C H GL+D G +YF M S Y + P L+H+ CM
Sbjct: 639 EALEMFERMQRANVVPNHATFVAVLRACSHVGLLDDGCQYFHLMTSRYKLVPQLEHFACM 698
Query: 565 VDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHG 624
VD+LGR+ ++A E IRSMP++AD V+W TLL+ +I +VEV E AA ++ L P
Sbjct: 699 VDILGRSKGPQEALEFIRSMPIEADAVVWKTLLSICKIRQDVEVAETAASNVLRLDPDDA 758
Query: 625 PSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
+LLSN+YA +G+W D R+ MR +++ PG S
Sbjct: 759 SVYILLSNVYAGSGKWVDVSRTRRLMRQGRLRKEPGCS 796
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 158/661 (23%), Positives = 280/661 (42%), Gaps = 113/661 (17%)
Query: 38 AVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMIS 97
A++ GQ H+ + SG TF+ N L+ +YA+CG + A +FD+ D V+ N M++
Sbjct: 34 ALTTGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGTAHAHGVFDTMPHRDTVSWNTMLT 93
Query: 98 GYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVT 157
Y+ + A +F P VS+ ++I G+ Q+ +R ++ + +M GV + T
Sbjct: 94 AYVHAGDTDTAASLFGTMPDPDVVSWNTLISGYCQHGMFRNSVGLSMEMSRRGVALDRTT 153
Query: 158 LASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMK 217
LA ++ S L + +H L +K ++ V + L++MY C SL +A F M
Sbjct: 154 LAVLLKSCGGLDDLALGVQIHALAVKTGLETDVRAGSALVDMYGKCRSLDDALRFFHGMG 213
Query: 218 ERNIVSWNVMLNG----------------FAKAGL-------------------VELARE 242
ERN VSW + G + GL + AR+
Sbjct: 214 ERNSVSWGAAIAGCVQNEQYTRGMELFVQMQRLGLGVSQPAYASAFRSCAAMPCLSTARQ 273
Query: 243 L----FERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLI---- 294
L + + S D V ++D Y + L +A + + + + M+V L+
Sbjct: 274 LHAHAIKNVFSSDRVVGTAIVDVYAKAGNLVDARRAFIGLPHHNVETCNAMMVGLVRTGL 333
Query: 295 ---------------------------SACGRAMAFGEGLQIHSIIVKAGFDCYDFIQAT 327
SAC + +GLQ+H + VK+GFD ++
Sbjct: 334 GAEAMQLFQFMTRSGVGFDVISLSGVFSACAEVKGYFQGLQVHCLAVKSGFDVDVCVRNA 393
Query: 328 IIHFYAACGRINLARLQF-ELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYS 386
I+ Y C + A L F E+ +D + SWNA+IA +N ED N M +
Sbjct: 394 ILDLYGKCKALVEAYLVFQEMEQRDSV-SWNAIIAALEQNECYEDTIAHLNEMLR----- 447
Query: 387 WSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVL 446
+G++P++ T SV A A +L+ G H +
Sbjct: 448 --------------------------SGMEPDDFTYGSVLKACAGLQSLEYGLVVHGKAI 481
Query: 447 NNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLT 506
+ + L+ +S+ ++DMY KCG+I A ++ H R + WN+II G ++ +
Sbjct: 482 KSGLGLDAFVSSTVVDMYCKCGAITEAQKL--HDRIGGQELVSWNSIISGFSLTKQSEEA 539
Query: 507 LKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVD 566
+ +S++ +K + T+ VL TC + ++LG++ + + D +VD
Sbjct: 540 QRFFSEMLDMGVKPDHFTYATVLDTCANLATIELGKQIHGQIIK-QEMLGDEYISSTLVD 598
Query: 567 LLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGN----VEVGERAAKSLAGLQPS 622
+ + G + D+ ++ K D V W ++ +HG +E+ ER + A + P+
Sbjct: 599 MYAKCGNMPDS-LLMFEKARKLDFVSWNAMICGYALHGQGLEALEMFERMQR--ANVVPN 655
Query: 623 H 623
H
Sbjct: 656 H 656
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 92/363 (25%), Positives = 159/363 (43%), Gaps = 66/363 (18%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
++L C+ QG Q+H L KSG + + ++N++++LY KC + +A +F
Sbjct: 354 ISLSGVFSACAEVKGYFQGLQVHCLAVKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQE 413
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
D VS+ ++I QN+C+ + +
Sbjct: 414 MEQRDS-------------------------------VSWNAIIAALEQNECYEDTIAHL 442
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIK--LMIDGFVIISTNLLNMYC 201
+M G+ P++ T SV+ + L + ++HG IK L +D FV S+ +++MYC
Sbjct: 443 NEMLRSGMEPDDFTYGSVLKACAGLQSLEYGLVVHGKAIKSGLGLDAFV--SSTVVDMYC 500
Query: 202 VCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDG 261
C ++ EA+ L D + + +VSWN +++GF+ E A+ F
Sbjct: 501 KCGAITEAQKLHDRIGGQELVSWNSIISGFSLTKQSEEAQRFF----------------- 543
Query: 262 YLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCY 321
SE L M G+ P+ ++ C G QIH I+K
Sbjct: 544 -------SEMLDM-------GVKPDHFTYATVLDTCANLATIELGKQIHGQIIKQEMLGD 589
Query: 322 DFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQK 381
++I +T++ YA CG + + L FE K SWNA+I G+ +G +A ++F MQ+
Sbjct: 590 EYISSTLVDMYAKCGNMPDSLLMFEKARKLDFVSWNAMICGYALHGQGLEALEMFERMQR 649
Query: 382 RDV 384
+V
Sbjct: 650 ANV 652
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 131/297 (44%), Gaps = 6/297 (2%)
Query: 290 IVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGI 349
+ L ++ GR+ A G H+ ++ +GF F+ ++ YA CG A F+
Sbjct: 23 LYQLCASAGRS-ALTTGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGTAHAHGVFDTMP 81
Query: 350 KDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHG 409
SWN ++ ++ G + A LF M DV SW+ +ISGY Q+ ++ L
Sbjct: 82 HRDTVSWNTMLTAYVHAGDTDTAASLFGTMPDPDVVSWNTLISGYCQHGMFRNSVGLSME 141
Query: 410 MVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGS 469
M GV + T+ + + L G H + + + +A++DMY KC S
Sbjct: 142 MSRRGVALDRTTLAVLLKSCGGLDDLALGVQIHALAVKTGLETDVRAGSALVDMYGKCRS 201
Query: 470 INTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVL 529
++ A F+ + +R SVS W A I G + ++++ +++ + ++ +
Sbjct: 202 LDDALRFFHGMGER-NSVS-WGAAIAGCVQNEQYTRGMELFVQMQRLGLGVSQPAYASAF 259
Query: 530 STCCHAGLVDLGER-YFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMP 585
+C + + + ++K+V++ D +VD+ +AG L DA +P
Sbjct: 260 RSCAAMPCLSTARQLHAHAIKNVFS--SDRVVGTAIVDVYAKAGNLVDARRAFIGLP 314
>gi|224133790|ref|XP_002327681.1| predicted protein [Populus trichocarpa]
gi|222836766|gb|EEE75159.1| predicted protein [Populus trichocarpa]
Length = 654
Score = 301 bits (770), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 153/423 (36%), Positives = 245/423 (57%), Gaps = 5/423 (1%)
Query: 243 LFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMA 302
+F ++ + + +I GYL ERL E+ Y M +G+ P L ACG M
Sbjct: 102 IFNQVNYPNPFLYNALIRGYLIEERLKESTEFYSLMRKEGVVPVSFTFTALFKACGAKMD 161
Query: 303 FGEGLQIH-SIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIA 361
G G QIH I+ GF + ++I Y CG + R F+ + SW LI+
Sbjct: 162 VGLGRQIHGQTILVGGFGEDLHVGNSMIDMYIKCGFLECGRKVFDEMPNRDVISWTELIS 221
Query: 362 GFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEIT 421
++++G +E A +LF+ + +D+ +W+ M+SG+AQN +P A+ F M + GV+ +EIT
Sbjct: 222 AYVKSGNMESAGELFDGLPVKDMVAWTVMVSGFAQNAKPREAIMFFEKMQEFGVETDEIT 281
Query: 422 MVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNL--SAAIIDMYAKCGSINTAFEVFYH 479
++ V A A G K W + + ++ +A+IDMY+KCGS+ A+ VF
Sbjct: 282 LIGVISACAQLGAAKYADWIRDVAEKSEFGGKHSVVVGSALIDMYSKCGSVGDAYRVFQG 341
Query: 480 IRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVD 539
+++R +V ++++I G AMHG + +K++ ++ K IK N +TFIGVL+ C HAG+V+
Sbjct: 342 MKER--NVYSYSSMILGFAMHGRVHDAMKLFDEMVKTEIKPNRVTFIGVLTACSHAGMVE 399
Query: 540 LGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAA 599
G + F+ M+ Y ++P HY CMVDLLGRAG+L++A E++++MP++ +WG LL A
Sbjct: 400 QGWQIFELMEKCYGIKPSADHYTCMVDLLGRAGRLQEAHELVKTMPIEPHGGVWGALLGA 459
Query: 600 SRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLP 659
RIH + ++ AA L L+P + +LL+NIYA GRW D ++RK MR G+++ P
Sbjct: 460 CRIHKSPDIAAIAANHLFELEPYCIGNYILLANIYASCGRWNDVSTVRKLMRTRGLRKNP 519
Query: 660 GFS 662
FS
Sbjct: 520 AFS 522
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 118/493 (23%), Positives = 226/493 (45%), Gaps = 80/493 (16%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAK--SM 80
E +V+ L C ++Q +Q+H+ I +GL+ + ++ LI K + S+
Sbjct: 46 ESQIVTTLDGCKN---LTQIKQVHARILLNGLDQSCYVLAKLIRTLTKLNIPVDPYPLSI 102
Query: 81 FDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREAL 140
F+ + +P N +I GY+ +RL +E+
Sbjct: 103 FNQVNYPNPFLYNALIRGYLIEERL-------------------------------KEST 131
Query: 141 EVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGF---VIISTNLL 197
E + MR GV+P T ++ + + R +HG I ++ GF + + +++
Sbjct: 132 EFYSLMRKEGVVPVSFTFTALFKACGAKMDVGLGRQIHGQTI--LVGGFGEDLHVGNSMI 189
Query: 198 NMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGT 257
+MY C L R +FDEM R+++SW +++ + K+G +E A ELF+ +P KD+V+W
Sbjct: 190 DMYIKCGFLECGRKVFDEMPNRDVISWTELISAYVKSGNMESAGELFDGLPVKDMVAWTV 249
Query: 258 MIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAG 317
M+ G+ Q + EA+ + M G+ +++ ++ +ISAC + A I + K+
Sbjct: 250 MVSGFAQNAKPREAIMFFEKMQEFGVETDEITLIGVISACAQLGAAKYADWIRDVAEKS- 308
Query: 318 FDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFN 377
E G K + +ALI + + G + DA ++F
Sbjct: 309 ----------------------------EFGGKHSVVVGSALIDMYSKCGSVGDAYRVFQ 340
Query: 378 NMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKE 437
M++R+VYS+S+MI G+A + + + A++LF MV +KPN +T + V A + +G +++
Sbjct: 341 GMKERNVYSYSSMILGFAMHGRVHDAMKLFDEMVKTEIKPNRVTFIGVLTACSHAGMVEQ 400
Query: 438 GRWAHEYVLN-NSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSP----WNA 492
G E + I + + ++D+ + G + A E+ +T + P W A
Sbjct: 401 GWQIFELMEKCYGIKPSADHYTCMVDLLGRAGRLQEAHELV-----KTMPIEPHGGVWGA 455
Query: 493 IICGLAMHGDANL 505
++ +H ++
Sbjct: 456 LLGACRIHKSPDI 468
>gi|357154827|ref|XP_003576915.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like, partial [Brachypodium distachyon]
Length = 735
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 186/640 (29%), Positives = 314/640 (49%), Gaps = 97/640 (15%)
Query: 25 ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSC 84
+LVS + C G +H L+ K+GL+S + N+L+++Y K G + +
Sbjct: 179 SLVSVVPACGVEQEGGFGLGVHGLVLKTGLDSIVNLGNALVDMYGKFGHVEASM------ 232
Query: 85 STLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFR 144
+VF+ P + VS+ S I F + + L +FR
Sbjct: 233 -------------------------KVFEGMPERNEVSWNSAIGCFLNAGLYGDVLALFR 267
Query: 145 DMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCS 204
M G +P +TL+S++ + V LG R +HG IK ++ + ++ +L++MY
Sbjct: 268 GMSERGFMPGSITLSSLLPALVELGYFDLGREVHGYSIKRAMELDIFVANSLVDMYAKFG 327
Query: 205 SLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQ 264
SL +A ++F++++ RN+VSWN M+ A LV+ E
Sbjct: 328 SLEKACAVFEKIEVRNVVSWNAMI-----ANLVQNGAE---------------------- 360
Query: 265 VERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFI 324
SEA + M DG PN + +V+L+ AC R + G QIH+ ++ G FI
Sbjct: 361 ----SEAFGLVIKMQKDGECPNSITLVNLLPACSRMASLKTGKQIHAWSIRTGLMFDLFI 416
Query: 325 QATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDV 384
+I YA CG++ LA+ F+L KD +
Sbjct: 417 SNALIDMYAKCGQLRLAQSIFDLSEKDDV------------------------------- 445
Query: 385 YSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEY 444
S++ +I GY+Q+ +L LF + G++ + I+ + A + + K+G+ H
Sbjct: 446 -SYNTLILGYSQSPWSFESLNLFKQLSSVGIEYDAISFMGALTACTNLSSFKQGKEIHGV 504
Query: 445 VLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDAN 504
++ ++ + L+ ++ +Y K G ++TA ++F I+++ V+ WN +I G MHG +
Sbjct: 505 LVRRLLSNHPFLANTLLGLYTKGGMLDTASKIFNRIKEK--DVASWNNMIMGYGMHGQID 562
Query: 505 LTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCM 564
++ ++ + + +++I VLS C H GLV+ G++YF M + N+EP HY CM
Sbjct: 563 AAFHLFDLMKDHGVTYDHVSYIAVLSVCSHGGLVERGKKYFSHMLA-QNLEPQQMHYACM 621
Query: 565 VDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHG 624
VDLLGR+GQL ++ E+I MP A+ +WG LL A RIHGN+E+ + AA L L+P H
Sbjct: 622 VDLLGRSGQLTESVEIILDMPFHANSDVWGALLGACRIHGNIELAQYAADHLFELKPEHS 681
Query: 625 PSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
+L N+YA+AGRW +A IR M+ +++ P +S V
Sbjct: 682 GYYSVLRNMYAEAGRWNEAHKIRTLMKSRKVQKNPAYSWV 721
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/377 (22%), Positives = 169/377 (44%), Gaps = 49/377 (12%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+ LV+ L CS ++ G+QIH+ ++GL + FI N+LI++YAKCG + A+S+FD
Sbjct: 380 ITLVNLLPACSRMASLKTGKQIHAWSIRTGLMFDLFISNALIDMYAKCGQLRLAQSIFDL 439
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
D VSY ++I+G++Q+ E+L +F
Sbjct: 440 SEKDD--------------------------------VSYNTLILGYSQSPWSFESLNLF 467
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
+ + +G+ + ++ +++ +L + + +HG++++ ++ ++ LL +Y
Sbjct: 468 KQLSSVGIEYDAISFMGALTACTNLSSFKQGKEIHGVLVRRLLSNHPFLANTLLGLYTKG 527
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIP----SKDVVSWGTMI 259
L A +F+ +KE+++ SWN M+ G+ G ++ A LF+ + + D VS+ ++
Sbjct: 528 GMLDTASKIFNRIKEKDVASWNNMIMGYGMHGQIDAAFHLFDLMKDHGVTYDHVSYIAVL 587
Query: 260 DGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFD 319
+ + ML + P + ++ GR+ E ++ II+ F
Sbjct: 588 SVCSHGGLVERGKKYFSHMLAQNLEPQQMHYACMVDLLGRSGQLTESVE---IILDMPFH 644
Query: 320 CYDFIQATIIHFYAACGRINLARLQ----FELGIKDHIASWNALIAGFIRNGMIEDARQL 375
+ ++ G I LA+ FEL +H ++ L + G +A ++
Sbjct: 645 ANSDVWGALLGACRIHGNIELAQYAADHLFELK-PEHSGYYSVLRNMYAEAGRWNEAHKI 703
Query: 376 FNNMQKRDV-----YSW 387
M+ R V YSW
Sbjct: 704 RTLMKSRKVQKNPAYSW 720
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 96/338 (28%), Positives = 153/338 (45%), Gaps = 49/338 (14%)
Query: 269 SEALTMYRAMLCDGIAPND--VMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQA 326
+EAL +Y ML G++P+D +A +GL++H+ +++G F
Sbjct: 56 TEALLVYNHMLRSGVSPDDRTFPFALHAAAAAAQAHPAKGLELHAAALRSGHLADVFAGN 115
Query: 327 TIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYS 386
T++ FYAACG AR F+ + SWN+L++ F+ N M +DARQ
Sbjct: 116 TLVAFYAACGHAGDARRVFDEMPARDVVSWNSLVSSFLANKMFDDARQ------------ 163
Query: 387 WSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVF--CAIASSGTLKEGRWAHEY 444
A++S M+ +GV N ++VSV C + G G H
Sbjct: 164 --ALLS-----------------MMRSGVPVNVASLVSVVPACGVEQEGGFGLG--VHGL 202
Query: 445 VLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWN-AIICGL--AMHG 501
VL + NL A++DMY K G + + +VF + +R WN AI C L ++G
Sbjct: 203 VLKTGLDSIVNLGNALVDMYGKFGHVEASMKVFEGMPERNE--VSWNSAIGCFLNAGLYG 260
Query: 502 DANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLG-ERYFKSMKSVYNVEPDLKH 560
D L ++ + +R SIT +L G DLG E + S+K +E D+
Sbjct: 261 D---VLALFRGMSERGFMPGSITLSSLLPALVELGYFDLGREVHGYSIKRA--MELDIFV 315
Query: 561 YGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLA 598
+VD+ + G LE A V + ++ +VV W ++A
Sbjct: 316 ANSLVDMYAKFGSLEKACAVFEKIEVR-NVVSWNAMIA 352
Score = 43.1 bits (100), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 63/290 (21%), Positives = 115/290 (39%), Gaps = 30/290 (10%)
Query: 379 MQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEIT--MVSVFCAIASSGTLK 436
++ R + W+++ + P AL +++ M+ +GV P++ T A A+
Sbjct: 34 LRLRSAFLWNSLSRALSSASLPTEALLVYNHMLRSGVSPDDRTFPFALHAAAAAAQAHPA 93
Query: 437 EGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICG 496
+G H L + + ++ YA CG A VF + R V WN+++
Sbjct: 94 KGLELHAAALRSGHLADVFAGNTLVAFYAACGHAGDARRVFDEMPAR--DVVSWNSLVSS 151
Query: 497 L---AMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCC--HAGLVDLGERYF---KSM 548
M DA L + + + +N + + V+ C G LG +
Sbjct: 152 FLANKMFDDARQALL---SMMRSGVPVNVASLVSVVPACGVEQEGGFGLGVHGLVLKTGL 208
Query: 549 KSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAA---SRIHGN 605
S+ N+ +VD+ G+ G +E + +V MP + +V W + + + ++G+
Sbjct: 209 DSIVNLG------NALVDMYGKFGHVEASMKVFEGMPERNEVS-WNSAIGCFLNAGLYGD 261
Query: 606 VEVGERAAKSLAGLQPSHGPSRVLLSNI----YADAGRWEDAFSIRKEMR 651
V R S G P LL + Y D GR +SI++ M
Sbjct: 262 VLALFRGM-SERGFMPGSITLSSLLPALVELGYFDLGREVHGYSIKRAME 310
>gi|225451356|ref|XP_002275085.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04750,
mitochondrial-like [Vitis vinifera]
Length = 654
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 157/443 (35%), Positives = 251/443 (56%), Gaps = 5/443 (1%)
Query: 225 NVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIA 284
N ++ + + + LA ++F+++ + D VS+ MI GY + EAL M+ G+
Sbjct: 166 NTLMKIYLENEKMGLAYQVFQQMAAPDAVSFNIMIFGYAKKGHNIEALKFLHEMVGLGLK 225
Query: 285 PNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGF--DCYDFIQATIIHFYAACGRINLAR 342
P++ ++ L+ CGR G +H+ I + G + ++ Y C + +A+
Sbjct: 226 PDEFTMLGLLICCGRLGDAQLGKSVHAWIERRGLIKSSNLILNNALLDMYVKCKELRIAQ 285
Query: 343 LQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNM 402
F + ++ SWN +IAG+ + G +E A F +M RD+ SW+++I+GYAQ M
Sbjct: 286 SIFNVIVRKDTISWNTMIAGYAKVGNLEIAHNFFEDMPCRDLVSWNSIIAGYAQKGDCLM 345
Query: 403 ALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIID 462
LF MV + P+ +T++++ A A G L GRW H +V+ + ++ L +A ID
Sbjct: 346 VQRLFENMVAENIWPDFVTIINLVSAAAEIGALHHGRWIHGWVVRMQMKIDAFLGSAFID 405
Query: 463 MYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNS 522
MY KCGSI A VF + ++ +V W +I G A HG + L+++ ++++ + N
Sbjct: 406 MYWKCGSIKRACMVFREVTEKDVTV--WTTMITGFAFHGYGSKALQLFYEMQEY-VMPNQ 462
Query: 523 ITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIR 582
+TF+ VL+ C H+G V G R F SMK Y +EP ++HYGC+VDLLGR+G+ + ++VI
Sbjct: 463 VTFVAVLTACSHSGFVSQGLRIFNSMKERYGIEPGVEHYGCLVDLLGRSGRFSEVKDVIE 522
Query: 583 SMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWED 642
MPMK IWG +L+A R +GN+E+ E A K L L+P VLLSNIYA +GRW+
Sbjct: 523 MMPMKPSRSIWGAVLSACRAYGNIEIAEIAGKELLKLEPEKEGGYVLLSNIYATSGRWKH 582
Query: 643 AFSIRKEMRDCGMKRLPGFSGVV 665
+ IR+ M G+K+ G S VV
Sbjct: 583 SDKIREIMESRGVKKTAGCSSVV 605
Score = 155 bits (392), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 108/413 (26%), Positives = 187/413 (45%), Gaps = 36/413 (8%)
Query: 93 NIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVI 152
N ++ Y+ N+++ A +VF + VS+ MI G+A+ EAL+ +M LG+
Sbjct: 166 NTLMKIYLENEKMGLAYQVFQQMAAPDAVSFNIMIFGYAKKGHNIEALKFLHEMVGLGLK 225
Query: 153 PNEVTLASVISSSVHLGGIWECRMLHGLVIK--LMIDGFVIISTNLLNMYCVCSSLVEAR 210
P+E T+ ++ LG + +H + + L+ +I++ LL+MY C L A+
Sbjct: 226 PDEFTMLGLLICCGRLGDAQLGKSVHAWIERRGLIKSSNLILNNALLDMYVKCKELRIAQ 285
Query: 211 SLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSE 270
S+F+ + ++ +SWN M+ G+AK G +E+A FE +P +D+VSW ++I GY Q
Sbjct: 286 SIFNVIVRKDTISWNTMIAGYAKVGNLEIAHNFFEDMPCRDLVSWNSIIAGYAQKGDCLM 345
Query: 271 ALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIH 330
++ M+ + I P+ V I++L+SA A G IH +V+ F+ + I
Sbjct: 346 VQRLFENMVAENIWPDFVTIINLVSAAAEIGALHHGRWIHGWVVRMQMKIDAFLGSAFID 405
Query: 331 FYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAM 390
Y CG I A + F + + W +I GF +G A QLF MQ+
Sbjct: 406 MYWKCGSIKRACMVFREVTEKDVTVWTTMITGFAFHGYGSKALQLFYEMQEY-------- 457
Query: 391 ISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG-RWAHEYVLNNS 449
V PN++T V+V A + SG + +G R +
Sbjct: 458 ------------------------VMPNQVTFVAVLTACSHSGFVSQGLRIFNSMKERYG 493
Query: 450 ITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGD 502
I ++D+ + G + +V + S S W A++ +G+
Sbjct: 494 IEPGVEHYGCLVDLLGRSGRFSEVKDVI-EMMPMKPSRSIWGAVLSACRAYGN 545
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 134/284 (47%), Gaps = 35/284 (12%)
Query: 29 ALRYCSAHIAVSQ-GQQIHSLIFKSGL--ESNTFIQNSLINLYAKCGLISQAKSMFDSCS 85
L C + +Q G+ +H+ I + GL SN + N+L+++Y KC + A+S+F+
Sbjct: 233 GLLICCGRLGDAQLGKSVHAWIERRGLIKSSNLILNNALLDMYVKCKELRIAQSIFNVIV 292
Query: 86 TLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRD 145
D ++ N MI+GY + L A F+ P + VS+ S+I G+AQ +F +
Sbjct: 293 RKDTISWNTMIAGYAKVGNLEIAHNFFEDMPCRDLVSWNSIIAGYAQKGDCLMVQRLFEN 352
Query: 146 MRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSS 205
M + P+ VT+ +++S++ +G + R +HG V+++ + + + ++MY C S
Sbjct: 353 MVAENIWPDFVTIINLVSAAAEIGALHHGRWIHGWVVRMQMKIDAFLGSAFIDMYWKCGS 412
Query: 206 LVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQV 265
+ A +F E+ E+++ W M+ GFA G A +LF +
Sbjct: 413 IKRACMVFREVTEKDVTVWTTMITGFAFHGYGSKALQLFYEMQ----------------- 455
Query: 266 ERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQI 309
+ + PN V V +++AC + +GL+I
Sbjct: 456 ---------------EYVMPNQVTFVAVLTACSHSGFVSQGLRI 484
>gi|242037745|ref|XP_002466267.1| hypothetical protein SORBIDRAFT_01g004770 [Sorghum bicolor]
gi|241920121|gb|EER93265.1| hypothetical protein SORBIDRAFT_01g004770 [Sorghum bicolor]
Length = 537
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 165/453 (36%), Positives = 254/453 (56%), Gaps = 15/453 (3%)
Query: 225 NVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIA 284
+L+ +A G AR+LF+ +P +V+ M + + ++AL ++ ML DG+
Sbjct: 51 TALLSAYAALGRPRHARDLFDEMPDPGLVTRTAMARAHAASGQTAQALAVFGDMLADGVL 110
Query: 285 PNDVMIVDLISAC----------GRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAA 334
P++V + ++AC G A A G +H++IV +G F+ +I Y
Sbjct: 111 PDNVALAVALAACHGTGSFPAALGMAAARRPGKMVHALIVTSGIVPDVFVSTELIRLYGE 170
Query: 335 CGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGY 394
G + ++R F+ SWNA++ +IR+ + DA +LF M KRDV SW+ +I+GY
Sbjct: 171 YGELLVSRRLFDAMPVKSTVSWNAMVHQYIRHSNVGDAYELFLAMPKRDVVSWNTIIAGY 230
Query: 395 AQNEQPNMALELFHGMVDAG---VKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSIT 451
+ ALELF M+ V PN T+ +V A A +G L+ G W H Y+ N +
Sbjct: 231 CLIGRFMEALELFRQMMSPSSCPVHPNGPTISTVLAACAGAGCLETGIWVHAYIDRNRMN 290
Query: 452 LNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYS 511
+ +L ++IDMYAKCGSI A +VF + S W +ICGLAMHG A L+++
Sbjct: 291 DDGSLDRSLIDMYAKCGSIEKALQVFEKAPGKRDLYS-WTTVICGLAMHGKAADALRMFG 349
Query: 512 DLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRA 571
++ I+ + +T +GVL+ C H GLVD G +F S++ Y + P ++HYGC++DLLGR
Sbjct: 350 MMQDNGIRPDDVTLVGVLNACAHGGLVDEGLHHFYSLEK-YAITPKIEHYGCVIDLLGRV 408
Query: 572 GQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLS 631
G+L++A +IR+M MK + VIWG L A ++H NVE+GE AA L L P ++V+LS
Sbjct: 409 GRLQEAYSIIRTMRMKPNAVIWGAFLNACKVHSNVELGEIAAAELTRLDPDDPWAKVMLS 468
Query: 632 NIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
++YA A W R+EM MK+ PG S +
Sbjct: 469 SLYAKAQDWSSLARERREMNSLQMKKTPGCSSI 501
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 135/487 (27%), Positives = 215/487 (44%), Gaps = 83/487 (17%)
Query: 35 AHIAVSQGQQIHSLIFKSGL-ESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACN 93
AH+A + IH L+FK GL + + + +L++ YA G
Sbjct: 26 AHLAAAA---IHGLLFKEGLLHAGSHLPTALLSAYAALG--------------------- 61
Query: 94 IMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIP 153
R AR++FD+ P V+ T+M A + +AL VF DM GV+P
Sbjct: 62 ----------RPRHARDLFDEMPDPGLVTRTAMARAHAASGQTAQALAVFGDMLADGVLP 111
Query: 154 NEVTLASVISSSVHLG------GIWECR----MLHGLVIKLMIDGFVIISTNLLNMYCVC 203
+ V LA +++ G G+ R M+H L++ I V +ST L+ +Y
Sbjct: 112 DNVALAVALAACHGTGSFPAALGMAAARRPGKMVHALIVTSGIVPDVFVSTELIRLYGEY 171
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYL 263
L+ +R LFD M ++ VSWN M++ + + V A ELF +P +DVVSW T+I GY
Sbjct: 172 GELLVSRRLFDAMPVKSTVSWNAMVHQYIRHSNVGDAYELFLAMPKRDVVSWNTIIAGYC 231
Query: 264 QVERLSEALTMYRAMLCDG---IAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDC 320
+ R EAL ++R M+ + PN I +++AC A G+ +H+ I + +
Sbjct: 232 LIGRFMEALELFRQMMSPSSCPVHPNGPTISTVLAACAGAGCLETGIWVHAYIDRNRMND 291
Query: 321 YDFIQATIIHFYAACGRINLARLQFELGI-KDHIASWNALIAGFIRNGMIEDARQLFNNM 379
+ ++I YA CG I A FE K + SW +I G +G DA ++F M
Sbjct: 292 DGSLDRSLIDMYAKCGSIEKALQVFEKAPGKRDLYSWTTVICGLAMHGKAADALRMFGMM 351
Query: 380 QKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGR 439
Q D G++P+++T+V V A A G + EG
Sbjct: 352 Q-------------------------------DNGIRPDDVTLVGVLNACAHGGLVDEG- 379
Query: 440 WAHEYVLNN-SITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLA 498
H Y L +IT +ID+ + G + A+ + +R + +V W A +
Sbjct: 380 LHHFYSLEKYAITPKIEHYGCVIDLLGRVGRLQEAYSIIRTMRMKPNAVI-WGAFLNACK 438
Query: 499 MHGDANL 505
+H + L
Sbjct: 439 VHSNVEL 445
>gi|15220808|ref|NP_173207.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75175206|sp|Q9LNP2.1|PPR47_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g17630
gi|8778465|gb|AAF79473.1|AC022492_17 F1L3.33 [Arabidopsis thaliana]
gi|332191495|gb|AEE29616.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 731
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 190/630 (30%), Positives = 319/630 (50%), Gaps = 55/630 (8%)
Query: 37 IAVSQGQQIHS------LIFKSG-LESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
+ Q +Q+H+ IF+SG L +N LI++YA+ GL+ A+++F++ S +
Sbjct: 67 LTAQQCRQVHAQVLLSDFIFRSGSLAAN------LISVYARLGLLLDARNVFETVSLV-- 118
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
L+D R + S++ + + ALE++R MR
Sbjct: 119 --------------LLSDLR------------LWNSILKANVSHGLYENALELYRGMRQR 152
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
G+ + L ++ + +LG CR H VI++ + + + LL +Y + +A
Sbjct: 153 GLTGDGYILPLILRACRYLGRFGLCRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDA 212
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSK----DVVSWGTMIDGYLQV 265
+LF EM RN +SWNVM+ GF++ E A ++FE + + D V+W +++ + Q
Sbjct: 213 YNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQC 272
Query: 266 ERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQ 325
+ + L + M G A + + S C A ++H ++K GF+ Y +
Sbjct: 273 GKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSR 332
Query: 326 ATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ----- 380
+IH Y G++ A F I SWN+LI F+ G +++A LF+ ++
Sbjct: 333 NALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHV 392
Query: 381 ---KRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKE 437
K +V +W+++I G + + +LE F M + V N +T+ + A L
Sbjct: 393 CNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCILSICAELPALNL 452
Query: 438 GRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGL 497
GR H +V+ S++ N + A+++MYAKCG ++ VF IRD+ + WN+II G
Sbjct: 453 GREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRDK--DLISWNSIIKGY 510
Query: 498 AMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPD 557
MHG A L ++ + + I + VLS C HAGLV+ G F SM + +EP
Sbjct: 511 GMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGREIFYSMSKRFGLEPQ 570
Query: 558 LKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLA 617
+HY C+VDLLGR G L++A E++++MPM+ V + G LL + R+H NV++ E A L+
Sbjct: 571 QEHYACIVDLLGRVGFLKEASEIVKNMPMEPKVCVLGALLNSCRMHKNVDIAEGIASQLS 630
Query: 618 GLQPSHGPSRVLLSNIYADAGRWEDAFSIR 647
L+P S +LLSNIY+ GRWE++ ++R
Sbjct: 631 VLEPERTGSYMLLSNIYSAGGRWEESANVR 660
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 120/515 (23%), Positives = 222/515 (43%), Gaps = 49/515 (9%)
Query: 13 QKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCG 72
++ L Y L L+ LR C + H+ + + GL+ N + N L+ LY K G
Sbjct: 150 RQRGLTGDGYILPLI--LRACRYLGRFGLCRAFHTQVIQIGLKENLHVVNELLTLYPKAG 207
Query: 73 LISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFD---KTPIKC-CVSYTSMIM 128
+ A ++F + ++ N+MI G+ + A ++F+ + K V++TS++
Sbjct: 208 RMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLS 267
Query: 129 GFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDG 188
+Q + + L+ F MR+ G + LA S L + +HG VIK +
Sbjct: 268 CHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGGFEE 327
Query: 189 FVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIP 248
++ L+++Y + +A LF +++ + I SWN ++ F AG ++ A LF +
Sbjct: 328 YLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELE 387
Query: 249 --------SKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRA 300
+VV+W ++I G R ++L +R M + N V I ++S C
Sbjct: 388 EMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCILSICAEL 447
Query: 301 MAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALI 360
A G +IH +++ +Q +++ YA CG ++ L FE + SWN++I
Sbjct: 448 PALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRDKDLISWNSII 507
Query: 361 AGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEI 420
G+ +G E AL +F M+ +G P+ I
Sbjct: 508 KGYGMHGFAEK-------------------------------ALSMFDRMISSGFHPDGI 536
Query: 421 TMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLS--AAIIDMYAKCGSINTAFEVFY 478
+V+V A + +G +++GR Y ++ L A I+D+ + G + A E+
Sbjct: 537 ALVAVLSACSHAGLVEKGREIF-YSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVK 595
Query: 479 HIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDL 513
++ V A++ MH + ++ I S L
Sbjct: 596 NM-PMEPKVCVLGALLNSCRMHKNVDIAEGIASQL 629
>gi|414873430|tpg|DAA51987.1| TPA: hypothetical protein ZEAMMB73_709752 [Zea mays]
Length = 536
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 167/452 (36%), Positives = 254/452 (56%), Gaps = 14/452 (3%)
Query: 225 NVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIA 284
+L+ +A G AR+LF+ +P +VS M + + ++AL ++R M+ DG+
Sbjct: 51 TALLSAYAALGRPRHARDLFDEMPDPGLVSRTAMARAHAASGQAAQALAVFRDMIADGVL 110
Query: 285 PNDVMIVDLISAC---------GRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAAC 335
P++V + ++AC G A A G +H+IIV +G F+ +I Y
Sbjct: 111 PDNVALAVALAACHTTASLPAAGMAAARRPGKMVHAIIVTSGIVPDVFVSTELIRVYGEY 170
Query: 336 GRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYA 395
G + L+R F+ SWNA++ +IR+ + DA +LF M +RDV SW+ MI+GY+
Sbjct: 171 GELALSRRLFDAMPVRSTVSWNAMVHQYIRHSNVGDAYELFLAMPRRDVVSWNTMIAGYS 230
Query: 396 QNEQPNMALELFHGMVDAG---VKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITL 452
+ ALEL M+ V PN TM +V A A +G L+ G W H +V N +
Sbjct: 231 LVGRFMEALELSRQMISPSSCPVYPNGPTMSTVLAACAGAGCLETGIWVHAFVDRNRMND 290
Query: 453 NDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSD 512
+ +L ++IDMY KCGSI A +VF + S W +ICGLAMHG A LK++
Sbjct: 291 DGSLDRSLIDMYVKCGSIEKALQVFEKAPEARDLYS-WTTMICGLAMHGRAADALKMFGM 349
Query: 513 LEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAG 572
++ I + +T +GVL+ C H GLVD G R+F S++ Y + P ++HYGC++DLLGR G
Sbjct: 350 MQDNGIHPDDVTLVGVLNACAHCGLVDEGLRHFYSLEK-YAITPKIEHYGCVIDLLGRVG 408
Query: 573 QLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSN 632
+L++A +IR+M MK + VIWG L A ++H NVE+GE AA L L P ++V+LS+
Sbjct: 409 RLQEAYNIIRTMRMKPNAVIWGAFLNACKVHSNVELGEIAAAELTRLDPGDPWAKVMLSS 468
Query: 633 IYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
+YA W R+EM + +K+ PG S +
Sbjct: 469 LYAKLQDWNSLARERREMNNLQIKKTPGCSSI 500
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 135/486 (27%), Positives = 212/486 (43%), Gaps = 82/486 (16%)
Query: 35 AHIAVSQGQQIHSLIFKSGL-ESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACN 93
AH+A ++ IH L+FK GL + + +L++ YA G
Sbjct: 26 AHLAAAE---IHGLLFKEGLLHAGAHLPTALLSAYAALG--------------------- 61
Query: 94 IMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIP 153
R AR++FD+ P VS T+M A + +AL VFRDM GV+P
Sbjct: 62 ----------RPRHARDLFDEMPDPGLVSRTAMARAHAASGQAAQALAVFRDMIADGVLP 111
Query: 154 NEVTLASV-----ISSSVHLGGIWECR----MLHGLVIKLMIDGFVIISTNLLNMYCVCS 204
+ V LA ++S+ G+ R M+H +++ I V +ST L+ +Y
Sbjct: 112 DNVALAVALAACHTTASLPAAGMAAARRPGKMVHAIIVTSGIVPDVFVSTELIRVYGEYG 171
Query: 205 SLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQ 264
L +R LFD M R+ VSWN M++ + + V A ELF +P +DVVSW TMI GY
Sbjct: 172 ELALSRRLFDAMPVRSTVSWNAMVHQYIRHSNVGDAYELFLAMPRRDVVSWNTMIAGYSL 231
Query: 265 VERLSEALTMYRAMLCDG---IAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCY 321
V R EAL + R M+ + PN + +++AC A G+ +H+ + + +
Sbjct: 232 VGRFMEALELSRQMISPSSCPVYPNGPTMSTVLAACAGAGCLETGIWVHAFVDRNRMNDD 291
Query: 322 DFIQATIIHFYAACGRINLARLQFELGIKDH-IASWNALIAGFIRNGMIEDARQLFNNMQ 380
+ ++I Y CG I A FE + + SW +I G +G DA ++F MQ
Sbjct: 292 GSLDRSLIDMYVKCGSIEKALQVFEKAPEARDLYSWTTMICGLAMHGRAADALKMFGMMQ 351
Query: 381 KRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRW 440
D G+ P+++T+V V A A G + EG
Sbjct: 352 -------------------------------DNGIHPDDVTLVGVLNACAHCGLVDEG-L 379
Query: 441 AHEYVLNN-SITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAM 499
H Y L +IT +ID+ + G + A+ + +R + +V W A + +
Sbjct: 380 RHFYSLEKYAITPKIEHYGCVIDLLGRVGRLQEAYNIIRTMRMKPNAVI-WGAFLNACKV 438
Query: 500 HGDANL 505
H + L
Sbjct: 439 HSNVEL 444
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 96/219 (43%), Gaps = 39/219 (17%)
Query: 26 LVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCS 85
+ + L C+ + G +H+ + ++ + + + SLI++Y KCG I +A +F
Sbjct: 260 MSTVLAACAGAGCLETGIWVHAFVDRNRMNDDGSLDRSLIDMYVKCGSIEKALQVF---- 315
Query: 86 TLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRD 145
++ +AR+++ S+T+MI G A + +AL++F
Sbjct: 316 -----------------EKAPEARDLY---------SWTTMICGLAMHGRAADALKMFGM 349
Query: 146 MRILGVIPNEVTLASVISSSVHLG----GIWECRMLHGLVIKLMIDGFVIISTNLLNMYC 201
M+ G+ P++VTL V+++ H G G+ L I I+ + + +++
Sbjct: 350 MQDNGIHPDDVTLVGVLNACAHCGLVDEGLRHFYSLEKYAITPKIEHYGCV----IDLLG 405
Query: 202 VCSSLVEARSLFDEMKER-NIVSWNVMLNGFAKAGLVEL 239
L EA ++ M+ + N V W LN VEL
Sbjct: 406 RVGRLQEAYNIIRTMRMKPNAVIWGAFLNACKVHSNVEL 444
>gi|356567156|ref|XP_003551787.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Glycine max]
Length = 852
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 181/643 (28%), Positives = 313/643 (48%), Gaps = 107/643 (16%)
Query: 28 SALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTL 87
S R C+ A G Q+H KS ++ I + +++YAKC
Sbjct: 244 SVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKC---------------- 287
Query: 88 DPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMR 147
+R+ DA +VF+ P SY ++I+G+A+ D +AL++F+ ++
Sbjct: 288 ---------------ERMFDAWKVFNTLPNPPRQSYNAIIVGYARQDQGLKALDIFQSLQ 332
Query: 148 ILGVIPNEVTLASVISS----SVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
+ +E++L+ +++ HL GI LHGL +K + + ++ +L+MY C
Sbjct: 333 RNNLGFDEISLSGALTACSVIKRHLEGI----QLHGLAVKCGLGFNICVANTILDMYGKC 388
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYL 263
+L+E A +FE + +D VSW +I +
Sbjct: 389 GALME-------------------------------ACLIFEEMERRDAVSWNAIIAAHE 417
Query: 264 QVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDF 323
Q E + + L+++ +ML + P+D ++ AC A G +IH I+K+G F
Sbjct: 418 QNEEIVKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGTEIHGRIIKSGMGLDWF 477
Query: 324 IQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRD 383
+ + ++ Y CG M+ +A ++ ++++
Sbjct: 478 VGSALVDMYGKCG-------------------------------MLMEAEKIHARLEEKT 506
Query: 384 VYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHE 443
SW+++ISG++ +Q A F M++ G+ P+ T +V A+ T++ G+ H
Sbjct: 507 TVSWNSIISGFSSQKQSENAQRYFSQMLEMGIIPDNYTYATVLDVCANMATIELGKQIHA 566
Query: 444 YVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHI--RDRTTSVSPWNAIICGLAMHG 501
+L + + +++ ++DMY+KCG++ + +F RD T W+A+IC A HG
Sbjct: 567 QILKLQLHSDVYIASTLVDMYSKCGNMQDSRLMFEKAPKRDYVT----WSAMICAYAYHG 622
Query: 502 DANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHY 561
+ ++ +++ N+K N FI VL C H G VD G YF+ M S Y ++P ++HY
Sbjct: 623 LGEKAINLFEEMQLLNVKPNHTIFISVLRACAHMGYVDKGLHYFQKMLSHYGLDPQMEHY 682
Query: 562 GCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQP 621
CMVDLLGR+GQ+ +A ++I SMP +AD VIW TLL+ ++ GNVEV E+A SL L P
Sbjct: 683 SCMVDLLGRSGQVNEALKLIESMPFEADDVIWRTLLSNCKMQGNVEVAEKAFNSLLQLDP 742
Query: 622 SHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
+ VLL+N+YA G W + +R M++C +K+ PG S +
Sbjct: 743 QDSSAYVLLANVYAIVGMWGEVAKMRSIMKNCKLKKEPGCSWI 785
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 139/594 (23%), Positives = 258/594 (43%), Gaps = 68/594 (11%)
Query: 19 NSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAK 78
N +L L+ CS A++ G+Q+H+ + +G ++ N L+ Y K ++ A
Sbjct: 2 NPTKKLTFSHILQKCSNLKALNPGKQVHTQMIVTGFVPTIYVANCLLQFYCKSSKMNYAF 61
Query: 79 SMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWRE 138
+FD D ++ N +I GY + A+ +FD P + VS+ S++ + N R+
Sbjct: 62 KVFDRMPQRDVISWNTLIFGYAGIGNMGFAQSLFDSMPERDVVSWNSLLSCYLHNGVNRK 121
Query: 139 ALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLN 198
++E+F MR L + + T A ++ + + +H L I++ + V+ + L++
Sbjct: 122 SIEIFVRMRSLKIPHDYATFAVILKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVD 181
Query: 199 MYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTM 258
MY C L +A +F EM ERN+V W+ +
Sbjct: 182 MYSKCKKLDDAFRVFREMPERNLVCWS-------------------------------AV 210
Query: 259 IDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGF 318
I GY+Q +R E L +++ ML G+ + + +C AF G Q+H +K+ F
Sbjct: 211 IAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFRSCAGLSAFKLGTQLHGHALKSDF 270
Query: 319 DCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNN 378
I + YA C R+ DA ++FN
Sbjct: 271 AYDSIIGTATLDMYAKCERMF-------------------------------DAWKVFNT 299
Query: 379 MQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG 438
+ S++A+I GYA+ +Q AL++F + + +EI++ A + EG
Sbjct: 300 LPNPPRQSYNAIIVGYARQDQGLKALDIFQSLQRNNLGFDEISLSGALTACSVIKRHLEG 359
Query: 439 RWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLA 498
H + + N ++ I+DMY KCG++ A +F + +R +VS WNAII
Sbjct: 360 IQLHGLAVKCGLGFNICVANTILDMYGKCGALMEACLIFEEM-ERRDAVS-WNAIIAAHE 417
Query: 499 MHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLG-ERYFKSMKSVYNVEPD 557
+ + TL ++ + + ++ + T+ V+ C ++ G E + + +KS + D
Sbjct: 418 QNEEIVKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGTEIHGRIIKSGMGL--D 475
Query: 558 LKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGER 611
+VD+ G+ G L +AE++ + K V W ++++ E +R
Sbjct: 476 WFVGSALVDMYGKCGMLMEAEKIHARLEEKT-TVSWNSIISGFSSQKQSENAQR 528
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 116/472 (24%), Positives = 220/472 (46%), Gaps = 57/472 (12%)
Query: 154 NEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFV---IISTNLLNMYCVCSSLVEAR 210
++T + ++ +L + + +H ++++ GFV ++ LL YC S + A
Sbjct: 5 KKLTFSHILQKCSNLKALNPGKQVH---TQMIVTGFVPTIYVANCLLQFYCKSSKMNYAF 61
Query: 211 SLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSE 270
+FD M +R+++SWN ++ G+A G + A+ LF+ +P +DVVSW +++ YL +
Sbjct: 62 KVFDRMPQRDVISWNTLIFGYAGIGNMGFAQSLFDSMPERDVVSWNSLLSCYLHNGVNRK 121
Query: 271 ALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIH 330
++ ++ M I + ++ AC +G GLQ+H + ++ GF+ + ++
Sbjct: 122 SIEIFVRMRSLKIPHDYATFAVILKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVD 181
Query: 331 FYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAM 390
Y+ C ++ +DA ++F M +R++ WSA+
Sbjct: 182 MYSKCKKL-------------------------------DDAFRVFREMPERNLVCWSAV 210
Query: 391 ISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSI 450
I+GY QN++ L+LF M+ G+ ++ T SVF + A K G H + L +
Sbjct: 211 IAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYASVFRSCAGLSAFKLGTQLHGHALKSDF 270
Query: 451 TLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIY 510
+ + A +DMYAKC + A++VF + + +NAII G A L I+
Sbjct: 271 AYDSIIGTATLDMYAKCERMFDAWKVFNTLPNPPR--QSYNAIIVGYARQDQGLKALDIF 328
Query: 511 SDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMK-SVYNVEPDLKHYGC----MV 565
L++ N+ + I+ G L+ C + +R+ + ++ V+ L C ++
Sbjct: 329 QSLQRNNLGFDEISLSGALTAC------SVIKRHLEGIQLHGLAVKCGLGFNICVANTIL 382
Query: 566 DLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLA 617
D+ G+ G L +A + M + D V W ++AA E E K+L+
Sbjct: 383 DMYGKCGALMEACLIFEEME-RRDAVSWNAIIAAH------EQNEEIVKTLS 427
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 120/515 (23%), Positives = 214/515 (41%), Gaps = 106/515 (20%)
Query: 3 LDHFHSVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQN 62
LD F S+ Q+ NL E++L AL CS +G Q+H L K GL N + N
Sbjct: 325 LDIFQSL---QRNNLGFD--EISLSGALTACSVIKRHLEGIQLHGLAVKCGLGFNICVAN 379
Query: 63 SLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVS 122
+++++Y KCG + +A +F+ D V+ N +I+ + +N+ + +K
Sbjct: 380 TILDMYGKCGALMEACLIFEEMERRDAVSWNAIIAAHEQNEEI-----------VKTLSL 428
Query: 123 YTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVI 182
+ SM+ R +E P++ T SV+ + + +HG +I
Sbjct: 429 FVSML---------RSTME-----------PDDFTYGSVVKACAGQQALNYGTEIHGRII 468
Query: 183 K--LMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELA 240
K + +D FV + L++MY C L+EA + ++E+ VSWN +++GF+ E A
Sbjct: 469 KSGMGLDWFV--GSALVDMYGKCGMLMEAEKIHARLEEKTTVSWNSIISGFSSQKQSENA 526
Query: 241 RELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRA 300
+ F + ML GI P++ ++ C
Sbjct: 527 QRYFSQ-------------------------------MLEMGIIPDNYTYATVLDVCANM 555
Query: 301 MAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALI 360
G QIH+ I+K +I +T++ Y+ CG + +RL FE K +W+A+I
Sbjct: 556 ATIELGKQIHAQILKLQLHSDVYIASTLVDMYSKCGNMQDSRLMFEKAPKRDYVTWSAMI 615
Query: 361 AGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEI 420
+ +G+ E A LF MQ + VKPN
Sbjct: 616 CAYAYHGLGEKAINLFEEMQLLN-------------------------------VKPNHT 644
Query: 421 TMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLS--AAIIDMYAKCGSINTAFEVFY 478
+SV A A G + +G + +L++ L+ + + ++D+ + G +N A ++
Sbjct: 645 IFISVLRACAHMGYVDKGLHYFQKMLSH-YGLDPQMEHYSCMVDLLGRSGQVNEALKLIE 703
Query: 479 HIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDL 513
+ V W ++ M G+ + K ++ L
Sbjct: 704 SMPFEADDVI-WRTLLSNCKMQGNVEVAEKAFNSL 737
>gi|297803844|ref|XP_002869806.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315642|gb|EFH46065.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 852
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 174/541 (32%), Positives = 293/541 (54%), Gaps = 47/541 (8%)
Query: 122 SYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLV 181
S+ ++ +Q+ ++E + V+ +M G+ P+ + SV+ + + + + + +H
Sbjct: 332 SWGCLVRFLSQHRKFKETVGVYIEMHYSGIPPSSHAITSVLRACGKMEDMVDGKPIHAQA 391
Query: 182 IKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELAR 241
+K + G V + T L+ +Y + A+ +FD++ E+N VSWN +L+G+ ++G ++ AR
Sbjct: 392 LKNGLCGCVYVQTGLVGLYSRFGYIEMAKKVFDDIAEKNTVSWNSLLHGYLESGNLDEAR 451
Query: 242 ELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAM 301
+F++IP KDVVSW +I Y + +S A +++ M A +++I
Sbjct: 452 RVFDKIPEKDVVSWNLIISSYAKKGDMSNACSLFLTMPLKSSATWNILIGG--------- 502
Query: 302 AFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIA 361
Y C + LAR F+ + + SW +I+
Sbjct: 503 ------------------------------YVNCREMKLARTYFDTMPQKNSVSWITMIS 532
Query: 362 GFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAG--VKPNE 419
G+ + G ++ A +LF M ++D + AMI+ YAQN +P AL+LF M+++ ++P+E
Sbjct: 533 GYTKLGDVQSAEKLFRQMSRKDKLVYDAMIACYAQNGKPKDALKLFSQMLESNSDIQPDE 592
Query: 420 ITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYH 479
IT+ SV A + G G W Y+ + I ++D LS ++ID+Y K G AF++F
Sbjct: 593 ITLSSVVSASSQLGDTSFGTWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKLFND 652
Query: 480 IRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVD 539
+ + T VS ++A+I G ++G A ++ ++ ++ I N +TF G+LS H+GLV
Sbjct: 653 LIKKDT-VS-YSAMIMGCGINGMATEANCLFREMIEKKIPPNLVTFTGLLSAYSHSGLVQ 710
Query: 540 LGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAA 599
G + F SMK +N+EP HYG MVD+LGRAG+LE+A E+I+SMPM+ + +WG LL A
Sbjct: 711 EGYKCFNSMKD-HNLEPSADHYGIMVDMLGRAGRLEEAYELIKSMPMQPNAGVWGALLLA 769
Query: 600 SRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLP 659
S +H NVE GE A L+ L+NIY GRW+DA ++R M + K+LP
Sbjct: 770 SGLHNNVEFGEIACSHCVKLETDPTGYLSHLANIYTSVGRWDDARNVRDSMEE---KKLP 826
Query: 660 G 660
G
Sbjct: 827 G 827
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 120/487 (24%), Positives = 210/487 (43%), Gaps = 81/487 (16%)
Query: 25 ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSC 84
A+ S LR C + G+ IH+ K+GL ++Q L+ LY++ G I AK +FD
Sbjct: 367 AITSVLRACGKMEDMVDGKPIHAQALKNGLCGCVYVQTGLVGLYSRFGYIEMAKKVFDDI 426
Query: 85 STLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFR 144
+ + V+ N ++ GY+ + L++AR VFDK P K VS+ +I +A+ A +F
Sbjct: 427 AEKNTVSWNSLLHGYLESGNLDEARRVFDKIPEKDVVSWNLIISSYAKKGDMSNACSLFL 486
Query: 145 DMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCS 204
M L S + ++ +GG CR + KL
Sbjct: 487 TM----------PLKSSATWNILIGGYVNCREM-----KL-------------------- 511
Query: 205 SLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQ 264
AR+ FD M ++N VSW M++G+ K G V+ A +LF ++ KD + + MI Y Q
Sbjct: 512 ----ARTYFDTMPQKNSVSWITMISGYTKLGDVQSAEKLFRQMSRKDKLVYDAMIACYAQ 567
Query: 265 VERLSEALTMYRAMLCDG--IAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD 322
+ +AL ++ ML I P+++ + ++SA + G + S I + G D
Sbjct: 568 NGKPKDALKLFSQMLESNSDIQPDEITLSSVVSASSQLGDTSFGTWVESYITEHGIKIDD 627
Query: 323 FIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKR 382
+ ++I Y G A F IK S++A+I G NGM +A LF
Sbjct: 628 LLSTSLIDLYMKGGDFAKAFKLFNDLIKKDTVSYSAMIMGCGINGMATEANCLFRE---- 683
Query: 383 DVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAH 442
M++ + PN +T + A + SG ++EG
Sbjct: 684 ---------------------------MIEKKIPPNLVTFTGLLSAYSHSGLVQEGYKCF 716
Query: 443 EYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSP----WNAIICGLA 498
+ ++++ + + ++DM + G + A+E+ ++ + P W A++
Sbjct: 717 NSMKDHNLEPSADHYGIMVDMLGRAGRLEEAYELI-----KSMPMQPNAGVWGALLLASG 771
Query: 499 MHGDANL 505
+H +
Sbjct: 772 LHNNVEF 778
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 109/447 (24%), Positives = 206/447 (46%), Gaps = 54/447 (12%)
Query: 244 FERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAF 303
F+ D SWG ++ Q + E + +Y M GI P+ I ++ ACG+
Sbjct: 322 FKSSKGMDSFSWGCLVRFLSQHRKFKETVGVYIEMHYSGIPPSSHAITSVLRACGKMEDM 381
Query: 304 GEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGF 363
+G IH+ +K G ++Q ++ Y+ G I +A+ F+ + + SWN+L+ G+
Sbjct: 382 VDGKPIHAQALKNGLCGCVYVQTGLVGLYSRFGYIEMAKKVFDDIAEKNTVSWNSLLHGY 441
Query: 364 IRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGM-VDAGVKPNEITM 422
+ +G +++AR++F+ + ++DV SW+ +IS YA+ + A LF M + + N +
Sbjct: 442 LESGNLDEARRVFDKIPEKDVVSWNLIISSYAKKGDMSNACSLFLTMPLKSSATWNILIG 501
Query: 423 VSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLS-AAIIDMYAKCGSINTAFEVFYHIR 481
V C +E + A Y +++ +++S +I Y K G + +A ++F +
Sbjct: 502 GYVNC--------REMKLARTYF--DTMPQKNSVSWITMISGYTKLGDVQSAEKLFRQMS 551
Query: 482 DRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRN--IKLNSITFIGVLSTCCHAG--- 536
+ V ++A+I A +G LK++S + + N I+ + IT V+S G
Sbjct: 552 RKDKLV--YDAMIACYAQNGKPKDALKLFSQMLESNSDIQPDEITLSSVVSASSQLGDTS 609
Query: 537 -----------------------LVDL---GERYFKSMKSVYN--VEPDLKHYGCMVDLL 568
L+DL G + K+ K ++N ++ D Y M+
Sbjct: 610 FGTWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFK-LFNDLIKKDTVSYSAMIMGC 668
Query: 569 GRAGQLEDAEEVIRSM---PMKADVVIWGTLLAASRIHGNVEVGERAAKSLA--GLQPSH 623
G G +A + R M + ++V + LL+A G V+ G + S+ L+PS
Sbjct: 669 GINGMATEANCLFREMIEKKIPPNLVTFTGLLSAYSHSGLVQEGYKCFNSMKDHNLEPSA 728
Query: 624 GPSRVLLSNIYADAGRWEDAFSIRKEM 650
+++ ++ AGR E+A+ + K M
Sbjct: 729 DHYGIMV-DMLGRAGRLEEAYELIKSM 754
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 98/249 (39%), Gaps = 74/249 (29%)
Query: 19 NSDY---ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLIS 75
NSD E+ L S + S S G + S I + G++ + + SLI+LY K G +
Sbjct: 585 NSDIQPDEITLSSVVSASSQLGDTSFGTWVESYITEHGIKIDDLLSTSLIDLYMKGGDFA 644
Query: 76 QAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDC 135
+A +F ND + K VSY++MIMG N
Sbjct: 645 KAFKLF--------------------NDLIK-----------KDTVSYSAMIMGCGINGM 673
Query: 136 WREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTN 195
EA +FR+M + PN VT ++S+ H G L+ +G+
Sbjct: 674 ATEANCLFREMIEKKIPPNLVTFTGLLSAYSHSG--------------LVQEGY------ 713
Query: 196 LLNMYCVCSSLVEARSLFDEMKERNIVS----WNVMLNGFAKAGLVELARELFERIP-SK 250
F+ MK+ N+ + +M++ +AG +E A EL + +P
Sbjct: 714 ---------------KCFNSMKDHNLEPSADHYGIMVDMLGRAGRLEEAYELIKSMPMQP 758
Query: 251 DVVSWGTMI 259
+ WG ++
Sbjct: 759 NAGVWGALL 767
>gi|242096286|ref|XP_002438633.1| hypothetical protein SORBIDRAFT_10g023240 [Sorghum bicolor]
gi|241916856|gb|EER90000.1| hypothetical protein SORBIDRAFT_10g023240 [Sorghum bicolor]
Length = 529
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 171/557 (30%), Positives = 292/557 (52%), Gaps = 39/557 (7%)
Query: 108 AREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVH 167
A + P++ C +I A+ + + V+ D+R G++ + T V+ +
Sbjct: 2 ATACYHAMPLRDC---NVLIRTLARRGSFARVMAVYYDLRARGLVADSYTYPFVLRAIGV 58
Query: 168 LGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVM 227
+ E R +H +K +++LL MY M
Sbjct: 59 MKLSVEGRKVHAAAVKTGFRWDAYTASSLLEMY-------------------------TM 93
Query: 228 LNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPND 287
L G V+ AR++F+ +P + +V W M+ Y++ R + A+ + M G P+
Sbjct: 94 L------GRVDFARKVFDEMPQRFLVLWNMMMRCYIRCGRFTAAVALAEEMERSGATPDR 147
Query: 288 VMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFEL 347
V +V ++AC RA G +I + + F + ++ Y G + A F+
Sbjct: 148 VTLVTAVTACSRAGDLSLGRRIRAYM-DGVFGFSLPVANALLDMYTKNGYLEEAVKMFQQ 206
Query: 348 GIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELF 407
+ +I SW L++G+ G ++ AR LF ++D+ W+AMI+ Q+ AL LF
Sbjct: 207 MPERNIISWTILVSGYAVAGQLDKARMLFYQCTQKDLILWTAMINACVQHGSFEEALTLF 266
Query: 408 HGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKC 467
M V+P++ T+V++ A+ G L +G W H+Y ++ ++ L A+I+MY+KC
Sbjct: 267 RDMQLQRVEPDKFTVVTLLTCCANIGALDQGEWIHQYAEGRNMKIDAVLGTALIEMYSKC 326
Query: 468 GSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIG 527
G ++ + ++F ++ R + W AIICGLA +G A+ L+++ ++++ K + ITFIG
Sbjct: 327 GHVDKSLQIFGRMQGR--DAAAWTAIICGLATNGQASKALELFEEMQRSKTKPDGITFIG 384
Query: 528 VLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMK 587
VL+ CCH GLVD G R+F++MK +Y +EP ++HY C+V+LLG AG L +AE++IR MP+
Sbjct: 385 VLNACCHGGLVDEGRRHFQAMKEIYQIEPRIEHYSCLVNLLGHAGLLYEAEKLIRDMPVN 444
Query: 588 ADVV-IWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPS-RVLLSNIYADAGRWEDAFS 645
D + ++G LL A + +GNVE+ ER K +A S P VL+SN+YA A RWE++
Sbjct: 445 NDTMPLFGALLTACKAYGNVEMSERLTKRIAKEDCSQNPDVNVLMSNVYATASRWEESIR 504
Query: 646 IRKEMRDCGMKRLPGFS 662
+R +M +K+ G S
Sbjct: 505 VRSKMTHPAVKKTAGCS 521
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 121/524 (23%), Positives = 209/524 (39%), Gaps = 108/524 (20%)
Query: 41 QGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYI 100
+G+++H+ K+G + + +SL+ +Y G
Sbjct: 64 EGRKVHAAAVKTGFRWDAYTASSLLEMYTMLG---------------------------- 95
Query: 101 RNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLAS 160
R++ AR+VFD+ P + V + M+ + + + A+ + +M G P+ VTL +
Sbjct: 96 ---RVDFARKVFDEMPQRFLVLWNMMMRCYIRCGRFTAAVALAEEMERSGATPDRVTLVT 152
Query: 161 VISSSVHLGGIWECRMLHGLVIKLMIDGF----VIISTNLLNMYCVCSSLVEARSLFDEM 216
+++ G + G I+ +DG + ++ LL+MY L EA +F +M
Sbjct: 153 AVTACSRAGDL-----SLGRRIRAYMDGVFGFSLPVANALLDMYTKNGYLEEAVKMFQQM 207
Query: 217 KERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYR 276
ERNI+SW ++++G+A AG ++ AR LF + KD++ W MI+ +Q EALT++R
Sbjct: 208 PERNIISWTILVSGYAVAGQLDKARMLFYQCTQKDLILWTAMINACVQHGSFEEALTLFR 267
Query: 277 AMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACG 336
M + P+ +V L++ C A +G IH + +I Y+ CG
Sbjct: 268 DMQLQRVEPDKFTVVTLLTCCANIGALDQGEWIHQYAEGRNMKIDAVLGTALIEMYSKCG 327
Query: 337 RINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQ 396
++ + F A+W A+I G NG A +LF MQ+
Sbjct: 328 HVDKSLQIFGRMQGRDAAAWTAIICGLATNGQASKALELFEEMQR--------------- 372
Query: 397 NEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNL 456
+ KP+ IT + V A G + EGR +
Sbjct: 373 ----------------SKTKPDGITFIGVLNACCHGGLVDEGRRHFQ------------- 403
Query: 457 SAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKR 516
A + Y I R S C + + G A L + +
Sbjct: 404 ----------------AMKEIYQIEPRIEHYS------CLVNLLGHAGLLYEAEKLIRDM 441
Query: 517 NIKLNSITFIGVLSTCCHA-GLVDLGERYFKSM-KSVYNVEPDL 558
+ +++ G L T C A G V++ ER K + K + PD+
Sbjct: 442 PVNNDTMPLFGALLTACKAYGNVEMSERLTKRIAKEDCSQNPDV 485
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 122/242 (50%), Gaps = 3/242 (1%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTF-IQNSLINLYAKCGLISQAKSMF 81
+ LV+A+ CS +S G++I + + G+ + + N+L+++Y K G + +A MF
Sbjct: 147 RVTLVTAVTACSRAGDLSLGRRIRA--YMDGVFGFSLPVANALLDMYTKNGYLEEAVKMF 204
Query: 82 DSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALE 141
+ ++ I++SGY +L+ AR +F + K + +T+MI Q+ + EAL
Sbjct: 205 QQMPERNIISWTILVSGYAVAGQLDKARMLFYQCTQKDLILWTAMINACVQHGSFEEALT 264
Query: 142 VFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYC 201
+FRDM++ V P++ T+ ++++ ++G + + +H + ++ T L+ MY
Sbjct: 265 LFRDMQLQRVEPDKFTVVTLLTCCANIGALDQGEWIHQYAEGRNMKIDAVLGTALIEMYS 324
Query: 202 VCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDG 261
C + ++ +F M+ R+ +W ++ G A G A ELFE + G G
Sbjct: 325 KCGHVDKSLQIFGRMQGRDAAAWTAIICGLATNGQASKALELFEEMQRSKTKPDGITFIG 384
Query: 262 YL 263
L
Sbjct: 385 VL 386
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 97/241 (40%), Gaps = 37/241 (15%)
Query: 16 NLQNSDYELALVSALRYCSAHI-AVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLI 74
LQ + + V L C A+I A+ QG+ IH ++ + + +LI +Y+KCG +
Sbjct: 270 QLQRVEPDKFTVVTLLTCCANIGALDQGEWIHQYAEGRNMKIDAVLGTALIEMYSKCGHV 329
Query: 75 SQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQND 134
++ +F D A +I G A N
Sbjct: 330 DKSLQIFGRMQGRDAAAWTAIICG-------------------------------LATNG 358
Query: 135 CWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIK--LMIDGFVII 192
+ALE+F +M+ P+ +T V+++ H G + E R H +K I+ +
Sbjct: 359 QASKALELFEEMQRSKTKPDGITFIGVLNACCHGGLVDEGRR-HFQAMKEIYQIEPRIEH 417
Query: 193 STNLLNMYCVCSSLVEARSLFDEMKERN--IVSWNVMLNGFAKAGLVELARELFERIPSK 250
+ L+N+ L EA L +M N + + +L G VE++ L +RI +
Sbjct: 418 YSCLVNLLGHAGLLYEAEKLIRDMPVNNDTMPLFGALLTACKAYGNVEMSERLTKRIAKE 477
Query: 251 D 251
D
Sbjct: 478 D 478
>gi|125603224|gb|EAZ42549.1| hypothetical protein OsJ_27115 [Oryza sativa Japonica Group]
Length = 696
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 194/644 (30%), Positives = 322/644 (50%), Gaps = 100/644 (15%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
AL SALR + + G Q+ SL KSGL +N F ++L+++YAKCG
Sbjct: 94 FALGSALRSAAVARRPAIGAQLQSLALKSGLANNVFAASALLDVYAKCG----------- 142
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
R+ DAR+VFD P + VS+ ++I G+ ++ ALE+F
Sbjct: 143 --------------------RVRDARQVFDGMPERNTVSWNALIAGYTESGDMASALELF 182
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
+M G+ P+E T AS++++ V + LHG ++K + + + Y C
Sbjct: 183 LEMEREGLAPDEATFASLLTA-VEGPSCFLMHQLHGKIVKYGSALGLTVLNAAITAYSQC 241
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYL 263
SL ++R +FD G+ ++ +D++SW M+ Y
Sbjct: 242 GSLKDSRRIFD--------------------GIGDI----------RDLISWNAMLGAYT 271
Query: 264 QVERLSEALTMY-RAMLCDGIAPNDVMIVDLISACGR-AMAFGEGLQIHSIIVKAGFDCY 321
EA+ + R M G+ P+ +IS+C +G IH +++K+ +
Sbjct: 272 HNGMDDEAMKFFVRMMQESGVHPDMYSFTSIISSCSEHGHDDHQGRVIHGLVIKSALEGV 331
Query: 322 DFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIR---NGMIEDARQLFNN 378
+ C NALIA + R N M+EDA + FN+
Sbjct: 332 TPV----------C---------------------NALIAMYTRYNENCMMEDAYKCFNS 360
Query: 379 MQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG 438
+ +D SW++M++GY+Q+ AL+ F M V+ +E + + + L+ G
Sbjct: 361 LVLKDTVSWNSMLTGYSQHGLSADALKFFRCMCSENVRTDEYAFSAALRSSSELAVLQLG 420
Query: 439 RWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLA 498
+ H V+++ ND +S+++I MY+K G I+ A + F D+++SV PWNA+I G A
Sbjct: 421 KQIHGLVIHSGFASNDFVSSSLIFMYSKSGIIDDARKSFEEA-DKSSSV-PWNAMIFGYA 478
Query: 499 MHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDL 558
HG A +++++ +R L+ ITF+G++++C HAGLVD G +M++ Y V +
Sbjct: 479 QHGQAENVDILFNEMLQRKAPLDHITFVGLITSCSHAGLVDEGSEILNTMETKYGVPLRM 538
Query: 559 KHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAG 618
+HY C VDL GRAGQL+ A+++I SMP + D ++W TLL A RIHGNVE+ A L
Sbjct: 539 EHYACGVDLYGRAGQLDKAKKLIDSMPFEPDAMVWMTLLGACRIHGNVELASDVASHLFV 598
Query: 619 LQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
+P + VLLS++Y+ G W D ++++ M+ G+ ++PG+S
Sbjct: 599 AEPRQHSTYVLLSSMYSGLGMWSDRATVQRVMKKRGLSKVPGWS 642
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 125/538 (23%), Positives = 227/538 (42%), Gaps = 88/538 (16%)
Query: 83 SCSTLDPVACNIMISGYIRN--DRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREAL 140
SC+T N +++ Y R+ D L AR VFD+ P + VS+ +++ A + EA
Sbjct: 22 SCAT---TPWNQLLTAYSRSSPDGLAAARRVFDEVPRRDEVSWNALLAAQAASGAHPEAW 78
Query: 141 EVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMY 200
+ R M G+ N L S + S+ L L +K + V ++ LL++Y
Sbjct: 79 RLLRAMHAQGLASNTFALGSALRSAAVARRPAIGAQLQSLALKSGLANNVFAASALLDVY 138
Query: 201 CVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMID 260
C + +AR +FD M ERN VSWN ++ G+ ++G + A ELF
Sbjct: 139 AKCGRVRDARQVFDGMPERNTVSWNALIAGYTESGDMASALELF---------------- 182
Query: 261 GYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDC 320
L++ER +G+AP++ L++A F Q+H IVK G
Sbjct: 183 --LEMER-------------EGLAPDEATFASLLTAVEGPSCFLMH-QLHGKIVKYGSAL 226
Query: 321 YDFIQATIIHFYAACGRINLARLQFELGIKD--HIASWNALIAGFIRNGMIEDARQLFNN 378
+ I Y+ CG + +R F+ GI D + SWNA++ + NGM ++A + F
Sbjct: 227 GLTVLNAAITAYSQCGSLKDSRRIFD-GIGDIRDLISWNAMLGAYTHNGMDDEAMKFFVR 285
Query: 379 MQKR-----DVYSWSAMISGYAQNEQPNMALELFHGMVDA----GVKPNEITMVSVFCAI 429
M + D+YS++++IS +++ + + HG+V GV P +++++
Sbjct: 286 MMQESGVHPDMYSFTSIISSCSEHGHDDHQGRVIHGLVIKSALEGVTPVCNALIAMYTRY 345
Query: 430 ASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSP 489
+ +++ Y NS+ L D +S
Sbjct: 346 NENCMMEDA-----YKCFNSLVLKDTVS-------------------------------- 368
Query: 490 WNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMK 549
WN+++ G + HG + LK + + N++ + F L + ++ LG++ +
Sbjct: 369 WNSMLTGYSQHGLSADALKFFRCMCSENVRTDEYAFSAALRSSSELAVLQLGKQIHGLVI 428
Query: 550 SVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVE 607
D ++ + ++G ++DA + K+ V W ++ HG E
Sbjct: 429 HSGFASNDFVS-SSLIFMYSKSGIIDDARKSFEEAD-KSSSVPWNAMIFGYAQHGQAE 484
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 64/136 (47%), Gaps = 6/136 (4%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E A +ALR S + G+QIH L+ SG SN F+ +SLI +Y+K G+I A+ F+
Sbjct: 401 EYAFSAALRSSSELAVLQLGKQIHGLVIHSGFASNDFVSSSLIFMYSKSGIIDDARKSFE 460
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFD-----KTPIKCCVSYTSMIMGFAQNDCWR 137
V N MI GY ++ + + +F+ K P+ +++ +I +
Sbjct: 461 EADKSSSVPWNAMIFGYAQHGQAENVDILFNEMLQRKAPLD-HITFVGLITSCSHAGLVD 519
Query: 138 EALEVFRDMRILGVIP 153
E E+ M +P
Sbjct: 520 EGSEILNTMETKYGVP 535
>gi|357444867|ref|XP_003592711.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355481759|gb|AES62962.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 550
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 161/479 (33%), Positives = 268/479 (55%), Gaps = 7/479 (1%)
Query: 192 ISTNLLNMYCVCSSLVEARSL------FDEMKERNIVSWNVMLNGFAKAGLVELARELFE 245
I+ LL++ C S++E + L + E + + + + + +G ++ + +F
Sbjct: 13 INGTLLSLLDKCKSMLELKKLHAIGISYGLSHEYSFIFKILSFSALSNSGDIDYSYRVFS 72
Query: 246 RIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGE 305
+I S + SW +I GY + +L+++ ML G+AP+ + L+ A R
Sbjct: 73 QISSPTIFSWNIIIRGYSNSKNPIHSLSIFLKMLRHGVAPDYLTYPFLVKASARLSKQKS 132
Query: 306 GLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIR 365
G+ +H+ I+K G + FIQ ++IH YA+CG I A FE ++ SWN+++ G+ +
Sbjct: 133 GVSVHAQIIKTGHESDRFIQNSLIHMYASCGNIMWAHKVFESMQGKNLVSWNSMLDGYAK 192
Query: 366 NGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSV 425
G + A+++F +MQ+RDV SWS+ I GY + + A+ +F M G K NE+TMVSV
Sbjct: 193 CGEMAMAQKVFESMQERDVRSWSSFIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSV 252
Query: 426 FCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTT 485
A A G L++GR H+Y+++N + + L +++DMYAKCG+I A VF I T
Sbjct: 253 LSACAHLGALQKGRMMHQYIIDNLLPMTMVLQTSLVDMYAKCGAIEEALFVFRGISKSQT 312
Query: 486 SVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYF 545
V WNA+I GLA HG +LK++ +++ I+ + IT++ +L+ C H GLV +F
Sbjct: 313 DVFIWNAMIGGLATHGLVEESLKLFKEMQMAGIRSDEITYLCLLAACAHGGLVKEAWNFF 372
Query: 546 KSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGN 605
+S+ + P +HY CMVD+L RAGQL A + I +P++ + G + + H N
Sbjct: 373 ESLVK-RGMTPTSEHYACMVDVLARAGQLTTAYQFICQIPIEPTASMLGAIFSGCINHRN 431
Query: 606 VEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
++ E + L L P++ + LSN+YA RW+D+ S+R+ M G+K+ PGFS V
Sbjct: 432 FDLAETVGRKLIELDPNNDGRYIGLSNVYAVVKRWDDSKSMREAMERRGVKKSPGFSFV 490
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 108/398 (27%), Positives = 189/398 (47%), Gaps = 36/398 (9%)
Query: 111 VFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGG 170
VF + S+ +I G++ + +L +F M GV P+ +T ++ +S L
Sbjct: 70 VFSQISSPTIFSWNIIIRGYSNSKNPIHSLSIFLKMLRHGVAPDYLTYPFLVKASARLSK 129
Query: 171 IWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNG 230
+H +IK + I +L++MY C +++ A +F+ M+ +N+VSWN ML+G
Sbjct: 130 QKSGVSVHAQIIKTGHESDRFIQNSLIHMYASCGNIMWAHKVFESMQGKNLVSWNSMLDG 189
Query: 231 FAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMI 290
+AK G + +A+++FE + +DV SW + IDGY++ EA+ ++ M G N+V +
Sbjct: 190 YAKCGEMAMAQKVFESMQERDVRSWSSFIDGYVKAGEYREAMAVFEKMRAVGPKANEVTM 249
Query: 291 VDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGI- 349
V ++SAC A +G +H I+ +Q +++ YA CG I A F GI
Sbjct: 250 VSVLSACAHLGALQKGRMMHQYIIDNLLPMTMVLQTSLVDMYAKCGAIEEALFVFR-GIS 308
Query: 350 --KDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELF 407
+ + WNA+I G +G++E++ +LF MQ
Sbjct: 309 KSQTDVFIWNAMIGGLATHGLVEESLKLFKEMQM-------------------------- 342
Query: 408 HGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKC 467
AG++ +EIT + + A A G +KE E ++ +T A ++D+ A+
Sbjct: 343 -----AGIRSDEITYLCLLAACAHGGLVKEAWNFFESLVKRGMTPTSEHYACMVDVLARA 397
Query: 468 GSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANL 505
G + TA++ I T+ S AI G H + +L
Sbjct: 398 GQLTTAYQFICQIPIEPTA-SMLGAIFSGCINHRNFDL 434
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/267 (31%), Positives = 150/267 (56%), Gaps = 9/267 (3%)
Query: 42 GQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIR 101
G +H+ I K+G ES+ FIQNSLI++YA CG I A +F+S + V+ N M+ GY +
Sbjct: 133 GVSVHAQIIKTGHESDRFIQNSLIHMYASCGNIMWAHKVFESMQGKNLVSWNSMLDGYAK 192
Query: 102 NDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASV 161
+ A++VF+ + S++S I G+ + +REA+ VF MR +G NEVT+ SV
Sbjct: 193 CGEMAMAQKVFESMQERDVRSWSSFIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSV 252
Query: 162 ISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEM--KER 219
+S+ HLG + + RM+H +I ++ +++ T+L++MY C ++ EA +F + +
Sbjct: 253 LSACAHLGALQKGRMMHQYIIDNLLPMTMVLQTSLVDMYAKCGAIEEALFVFRGISKSQT 312
Query: 220 NIVSWNVMLNGFAKAGLVELARELFERIP----SKDVVSWGTMIDGYLQVERLSEALTMY 275
++ WN M+ G A GLVE + +LF+ + D +++ ++ + EA +
Sbjct: 313 DVFIWNAMIGGLATHGLVEESLKLFKEMQMAGIRSDEITYLCLLAACAHGGLVKEAWNFF 372
Query: 276 RAMLCDGIAPND---VMIVDLISACGR 299
+++ G+ P +VD+++ G+
Sbjct: 373 ESLVKRGMTPTSEHYACMVDVLARAGQ 399
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 71/151 (47%), Gaps = 29/151 (19%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E+ +VS L C+ A+ +G+ +H I + L +Q SL+++YAKCG I +A +F
Sbjct: 246 EVTMVSVLSACAHLGALQKGRMMHQYIIDNLLPMTMVLQTSLVDMYAKCGAIEEALFVFR 305
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
S +VF + +MI G A + E+L++
Sbjct: 306 GIS--------------------KSQTDVF---------IWNAMIGGLATHGLVEESLKL 336
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWE 173
F++M++ G+ +E+T ++++ H G + E
Sbjct: 337 FKEMQMAGIRSDEITYLCLLAACAHGGLVKE 367
>gi|115476154|ref|NP_001061673.1| Os08g0375800 [Oryza sativa Japonica Group]
gi|27260973|dbj|BAC45090.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|40253357|dbj|BAD05289.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|113623642|dbj|BAF23587.1| Os08g0375800 [Oryza sativa Japonica Group]
gi|215715200|dbj|BAG94951.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 696
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 194/644 (30%), Positives = 322/644 (50%), Gaps = 100/644 (15%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
AL SALR + + G Q+ SL KSGL +N F ++L+++YAKCG
Sbjct: 94 FALGSALRSAAVARRPAIGAQLQSLALKSGLANNVFAASALLDVYAKCG----------- 142
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
R+ DAR+VFD P + VS+ ++I G+ ++ ALE+F
Sbjct: 143 --------------------RVRDARQVFDGMPERNTVSWNALIAGYTESGDMASALELF 182
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
+M G+ P+E T AS++++ V + LHG ++K + + + Y C
Sbjct: 183 LEMEREGLAPDEATFASLLTA-VEGPSCFLMHQLHGKIVKYGSALGLTVLNAAITAYSQC 241
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYL 263
SL ++R +FD G+ ++ +D++SW M+ Y
Sbjct: 242 GSLKDSRRIFD--------------------GIGDI----------RDLISWNAMLGAYT 271
Query: 264 QVERLSEALTMY-RAMLCDGIAPNDVMIVDLISACGR-AMAFGEGLQIHSIIVKAGFDCY 321
EA+ + R M G+ P+ +IS+C +G IH +++K+ +
Sbjct: 272 HNGMDDEAMKFFVRMMQESGVHPDMYSFTSIISSCSEHGHDDHQGRVIHGLVIKSALEGV 331
Query: 322 DFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIR---NGMIEDARQLFNN 378
+ C NALIA + R N M+EDA + FN+
Sbjct: 332 TPV----------C---------------------NALIAMYTRYNENCMMEDAYKCFNS 360
Query: 379 MQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG 438
+ +D SW++M++GY+Q+ AL+ F M V+ +E + + + L+ G
Sbjct: 361 LVLKDTVSWNSMLTGYSQHGLSADALKFFRCMCSENVRTDEYAFSAALRSSSELAVLQLG 420
Query: 439 RWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLA 498
+ H V+++ ND +S+++I MY+K G I+ A + F D+++SV PWNA+I G A
Sbjct: 421 KQIHGLVIHSGFASNDFVSSSLIFMYSKSGIIDDARKSFEEA-DKSSSV-PWNAMIFGYA 478
Query: 499 MHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDL 558
HG A +++++ +R L+ ITF+G++++C HAGLVD G +M++ Y V +
Sbjct: 479 QHGQAENVDILFNEMLQRKAPLDHITFVGLITSCSHAGLVDEGSEILNTMETKYGVPLRM 538
Query: 559 KHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAG 618
+HY C VDL GRAGQL+ A+++I SMP + D ++W TLL A RIHGNVE+ A L
Sbjct: 539 EHYACGVDLYGRAGQLDKAKKLIDSMPFEPDAMVWMTLLGACRIHGNVELASDVASHLFV 598
Query: 619 LQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
+P + VLLS++Y+ G W D ++++ M+ G+ ++PG+S
Sbjct: 599 AEPRQHSTYVLLSSMYSGLGMWSDRATVQRVMKKRGLSKVPGWS 642
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 123/532 (23%), Positives = 224/532 (42%), Gaps = 85/532 (15%)
Query: 89 PVACNIMISGYIRN--DRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDM 146
P N +++ Y R+ D L AR VFD+ P + VS+ +++ A + EA + R M
Sbjct: 25 PTPWNQLLTAYSRSSPDGLAAARRVFDEVPRRDEVSWNALLAAQAASGAHPEAWRLLRAM 84
Query: 147 RILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSL 206
G+ N L S + S+ L L +K + V ++ LL++Y C +
Sbjct: 85 HAQGLASNTFALGSALRSAAVARRPAIGAQLQSLALKSGLANNVFAASALLDVYAKCGRV 144
Query: 207 VEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVE 266
+AR +FD M ERN VSWN ++ G+ ++G + A ELF L++E
Sbjct: 145 RDARQVFDGMPERNTVSWNALIAGYTESGDMASALELF------------------LEME 186
Query: 267 RLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQA 326
R +G+AP++ L++A F Q+H IVK G +
Sbjct: 187 R-------------EGLAPDEATFASLLTAVEGPSCFLMH-QLHGKIVKYGSALGLTVLN 232
Query: 327 TIIHFYAACGRINLARLQFELGIKD--HIASWNALIAGFIRNGMIEDARQLFNNMQKR-- 382
I Y+ CG + +R F+ GI D + SWNA++ + NGM ++A + F M +
Sbjct: 233 AAITAYSQCGSLKDSRRIFD-GIGDIRDLISWNAMLGAYTHNGMDDEAMKFFVRMMQESG 291
Query: 383 ---DVYSWSAMISGYAQNEQPNMALELFHGMVDA----GVKPNEITMVSVFCAIASSGTL 435
D+YS++++IS +++ + + HG+V GV P +++++ + +
Sbjct: 292 VHPDMYSFTSIISSCSEHGHDDHQGRVIHGLVIKSALEGVTPVCNALIAMYTRYNENCMM 351
Query: 436 KEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIIC 495
++ Y NS+ L D +S WN+++
Sbjct: 352 EDA-----YKCFNSLVLKDTVS--------------------------------WNSMLT 374
Query: 496 GLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVE 555
G + HG + LK + + N++ + F L + ++ LG++ +
Sbjct: 375 GYSQHGLSADALKFFRCMCSENVRTDEYAFSAALRSSSELAVLQLGKQIHGLVIHSGFAS 434
Query: 556 PDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVE 607
D ++ + ++G ++DA + K+ V W ++ HG E
Sbjct: 435 NDFVS-SSLIFMYSKSGIIDDARKSFEEAD-KSSSVPWNAMIFGYAQHGQAE 484
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 64/136 (47%), Gaps = 6/136 (4%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E A +ALR S + G+QIH L+ SG SN F+ +SLI +Y+K G+I A+ F+
Sbjct: 401 EYAFSAALRSSSELAVLQLGKQIHGLVIHSGFASNDFVSSSLIFMYSKSGIIDDARKSFE 460
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFD-----KTPIKCCVSYTSMIMGFAQNDCWR 137
V N MI GY ++ + + +F+ K P+ +++ +I +
Sbjct: 461 EADKSSSVPWNAMIFGYAQHGQAENVDILFNEMLQRKAPLD-HITFVGLITSCSHAGLVD 519
Query: 138 EALEVFRDMRILGVIP 153
E E+ M +P
Sbjct: 520 EGSEILNTMETKYGVP 535
>gi|356501914|ref|XP_003519768.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02750-like [Glycine max]
Length = 627
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 195/649 (30%), Positives = 323/649 (49%), Gaps = 57/649 (8%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
L+L S L CS+H +HS F + ++ T +++ L+ K+ F S
Sbjct: 21 LSLFSHLHSCSSHT-------LHSFTFPTLFKACTNLRSPSHTQTLHAHLL---KTGFHS 70
Query: 84 CSTLDPVACNIMISGYIRNDR-LNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
DP A + + + Y N R DA + FD+ P S + + GF++N EAL V
Sbjct: 71 ----DPYASSALTAAYAANPRHFLDALKAFDEMPQPNVASLNAALSGFSRNGRRGEALRV 126
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
FR + + PN VT+A ++ V G M+H +KL ++ ++T+L+ YC
Sbjct: 127 FRRAGLGPLRPNSVTIACMLG--VPRVGANHVEMMHCCAVKLGVEFDAYVATSLVTAYCK 184
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
C +V A +F+E+ +++VS+N ++G + G+ L ++F+
Sbjct: 185 CGEVVSASKVFEELPVKSVVSYNAFVSGLLQNGVPRLVLDVFKE---------------- 228
Query: 263 LQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD 322
M R C N V +V ++SACG + G Q+H ++VK
Sbjct: 229 -----------MMRGEECVECKLNSVTLVSVLSACGSLQSIRFGRQVHGVVVKLEAGDGV 277
Query: 323 FIQATIIHFYAACGRINLARLQFEL-----GIKDHIASWNALIAGFIRNGMIEDARQLFN 377
+ ++ Y+ CG R FE+ G + ++ +WN++IAG + N E A +F
Sbjct: 278 MVMTALVDMYSKCG---FWRSAFEVFTGVEGNRRNLITWNSMIAGMMLNKESERAVDMFQ 334
Query: 378 NMQ----KRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSG 433
++ K D +W++MISG+AQ + A + F M GV P + S+ A A S
Sbjct: 335 RLESEGLKPDSATWNSMISGFAQLGECGEAFKYFGQMQSVGVAPCLKIVTSLLSACADSS 394
Query: 434 TLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAI 493
L+ G+ H L I +D L A++DMY KCG + A VF + + WNA+
Sbjct: 395 MLQHGKEIHGLSLRTDINRDDFLVTALVDMYMKCGLASWARGVFDQYDAKPDDPAFWNAM 454
Query: 494 ICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYN 553
I G +GD +I+ ++ + ++ NS TF+ VLS C H G VD G +F+ M+ Y
Sbjct: 455 IGGYGRNGDYESAFEIFDEMLEEMVRPNSATFVSVLSACSHTGQVDRGLHFFRMMRIEYG 514
Query: 554 VEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAA 613
++P +H+GC+VDLLGR+G+L +A++++ + + ++ +LL A R + + +GE A
Sbjct: 515 LQPKPEHFGCIVDLLGRSGRLSEAQDLMEEL-AEPPASVFASLLGACRCYLDSNLGEEMA 573
Query: 614 KSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
K L ++P + V+LSNIYA GRW++ IR + D G+ +L GFS
Sbjct: 574 KKLLDVEPENPAPLVVLSNIYAGLGRWKEVERIRGVITDKGLDKLSGFS 622
>gi|147817753|emb|CAN66661.1| hypothetical protein VITISV_031721 [Vitis vinifera]
Length = 569
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 172/486 (35%), Positives = 266/486 (54%), Gaps = 28/486 (5%)
Query: 205 SLVEARSLFDEMKERNIVSWNVMLNGFAKAG--LVEL------------ARELFERIPSK 250
SL E D +K+ + +++NGF++ LV+L A ++FERI +
Sbjct: 36 SLEETHITCDTIKKLKQIHTQIIVNGFSQKNFLLVKLLSFYITSGNLLNAHKVFERIENP 95
Query: 251 DVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIH 310
W MI G+ Q E + + +Y M+ PN+ LI C R+ EG Q+H
Sbjct: 96 STTVWNQMIRGHSQSETPHKLVELYNRMVEAEAEPNEFTYSFLIGGCARSXLLREGEQVH 155
Query: 311 SIIVKAGFDCYDFIQATIIHFYAACGR---INLARLQFELGIKDHIASWNALIAGFIRNG 367
+V G+ F++ ++++ YA G + AR F+ + +I SWN+L+AG++R G
Sbjct: 156 GRVVANGYCTNVFVRTSLVNLYAIAGGYDGVRKARRVFDEIVDRNIVSWNSLLAGYVRCG 215
Query: 368 MIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFC 427
++ AR++F+ M +R+V SW+ MI+G AQ + AL LFH M AGVK +++ +V+
Sbjct: 216 DVDGARRIFDEMPERNVVSWTTMIAGCAQIGRCKQALHLFHEMRRAGVKLDQVALVAALS 275
Query: 428 AIASSGTLKEGRWAHEYVLNNSITLND----NLSAAIIDMYAKCGSINTAFEVFYHIRDR 483
A A G LK G W H Y+ N +L+ ++I MYA CG I+ A++VF ++ R
Sbjct: 276 ACAELGDLKLGTWIHSYIDERLHAGNQPLLVSLNNSLIHMYASCGVIDKAYKVFIGMQQR 335
Query: 484 TTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNI---KLNSITFIGVLSTCCHAGLVDL 540
+T W ++I G A G A L ++ +++ + + ITFIGVL C HAG VD
Sbjct: 336 STI--SWTSMITGFAKQGHAEEALGVFQWMQRLGTDEGRPDGITFIGVLCACSHAGFVDQ 393
Query: 541 GERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAAS 600
G +F+ M + + P ++HYGCMVDLL RAG L++A + SMPMK + +WG LL
Sbjct: 394 GRHFFECMNKKWGIVPRIEHYGCMVDLLSRAGFLDEAHRLXESMPMKPNDAVWGALLGGC 453
Query: 601 RIHGNVEVGERAAKSLA-GLQPSHGPSR-VLLSNIYADAGRWEDAFSIRKEMRDCGMKRL 658
RIH N E+ A+ L L+P VLLSN+YA A RW+D +R++M + G+++
Sbjct: 454 RIHKNAELASHVAQKLVLELKPDQAAGYLVLLSNVYATAKRWQDVALVRQKMVEIGVRKP 513
Query: 659 PGFSGV 664
G S V
Sbjct: 514 AGRSWV 519
Score = 125 bits (314), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 126/220 (57%), Gaps = 7/220 (3%)
Query: 33 CSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGL---ISQAKSMFDSCSTLDP 89
C+ + +G+Q+H + +G +N F++ SL+NLYA G + +A+ +FD +
Sbjct: 142 CARSXLLREGEQVHGRVVANGYCTNVFVRTSLVNLYAIAGGYDGVRKARRVFDEIVDRNI 201
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
V+ N +++GY+R ++ AR +FD+ P + VS+T+MI G AQ ++AL +F +MR
Sbjct: 202 VSWNSLLAGYVRCGDVDGARRIFDEMPERNVVSWTTMIAGCAQIGRCKQALHLFHEMRRA 261
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDG----FVIISTNLLNMYCVCSS 205
GV ++V L + +S+ LG + +H + + + G V ++ +L++MY C
Sbjct: 262 GVKLDQVALVAALSACAELGDLKLGTWIHSYIDERLHAGNQPLLVSLNNSLIHMYASCGV 321
Query: 206 LVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFE 245
+ +A +F M++R+ +SW M+ GFAK G E A +F+
Sbjct: 322 IDKAYKVFIGMQQRSTISWTSMITGFAKQGHAEEALGVFQ 361
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 113/489 (23%), Positives = 202/489 (41%), Gaps = 78/489 (15%)
Query: 38 AVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMIS 97
+ + +QIH+ I +G F+ L++ Y G + A +F+ N MI
Sbjct: 46 TIKKLKQIHTQIIVNGFSQKNFLLVKLLSFYITSGNLLNAHKVFERIENPSTTVWNQMIR 105
Query: 98 GYIRNDRLNDAREVFDK------TPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGV 151
G+ +++ + E++++ P + +Y+ +I G A++ RE +V + G
Sbjct: 106 GHSQSETPHKLVELYNRMVEAEAEPNE--FTYSFLIGGCARSXLLREGEQVHGRVVANGY 163
Query: 152 IPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARS 211
N S+++ GG R V ++D ++ +LL Y C + AR
Sbjct: 164 CTNVFVRTSLVNLYAIAGGYDGVRKAR-RVFDEIVDRNIVSWNSLLAGYVRCGDVDGARR 222
Query: 212 LFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEA 271
+FDEM ERN+VSW M+ G A+ G R +A
Sbjct: 223 IFDEMPERNVVSWTTMIAGCAQIG-------------------------------RCKQA 251
Query: 272 LTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSII---VKAGFDCYDF-IQAT 327
L ++ M G+ + V +V +SAC G IHS I + AG + +
Sbjct: 252 LHLFHEMRRAGVKLDQVALVAALSACAELGDLKLGTWIHSYIDERLHAGNQPLLVSLNNS 311
Query: 328 IIHFYAACGRINLARLQFELGIKDH-IASWNALIAGFIRNGMIEDARQLFNNMQKRDVYS 386
+IH YA+CG I+ A F +G++ SW ++I GF + G E+A +F MQ+
Sbjct: 312 LIHMYASCGVIDKAYKVF-IGMQQRSTISWTSMITGFAKQGHAEEALGVFQWMQRLG--- 367
Query: 387 WSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVL 446
D G +P+ IT + V CA + +G + +GR E +
Sbjct: 368 ------------------------TDEG-RPDGITFIGVLCACSHAGFVDQGRHFFE-CM 401
Query: 447 NNSITLNDNLS--AAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDAN 504
N + + ++D+ ++ G ++ A + + + + W A++ G +H +A
Sbjct: 402 NKKWGIVPRIEHYGCMVDLLSRAGFLDEAHRLXESMPMKPND-AVWGALLGGCRIHKNAE 460
Query: 505 LTLKIYSDL 513
L + L
Sbjct: 461 LASHVAQKL 469
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 100/253 (39%), Gaps = 81/253 (32%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESN----TFIQNSLINLYAKCGLISQAK 78
++ALV+AL C+ + G IHS I + N + NSLI++YA CG+I +A
Sbjct: 267 QVALVAALSACAELGDLKLGTWIHSYIDERLHAGNQPLLVSLNNSLIHMYASCGVIDKAY 326
Query: 79 SMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWRE 138
+VF + +S+TSMI GFA+ E
Sbjct: 327 -------------------------------KVFIGMQQRSTISWTSMITGFAKQGHAEE 355
Query: 139 ALEVFRDMRILGV---IPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTN 195
AL VF+ M+ LG P+ +T V+ + H G +D
Sbjct: 356 ALGVFQWMQRLGTDEGRPDGITFIGVLCACSHAG---------------FVD-------- 392
Query: 196 LLNMYCVCSSLVEARSLFDEMKER-----NIVSWNVMLNGFAKAGLVELARELFERIPSK 250
+ R F+ M ++ I + M++ ++AG ++ A L E +P K
Sbjct: 393 ------------QGRHFFECMNKKWGIVPRIEHYGCMVDLLSRAGFLDEAHRLXESMPMK 440
Query: 251 --DVVSWGTMIDG 261
D V WG ++ G
Sbjct: 441 PNDAV-WGALLGG 452
>gi|359475985|ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
[Vitis vinifera]
Length = 1580
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 194/645 (30%), Positives = 315/645 (48%), Gaps = 95/645 (14%)
Query: 19 NSDYE-LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQA 77
N DY+ + L+ L + + G+Q+H + KSGL+S+ + NSL+N+Y+K G
Sbjct: 899 NIDYDAVTLLVVLAAVAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMG----- 953
Query: 78 KSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWR 137
C+ AREVF+ +S+ SMI AQ+
Sbjct: 954 ------CAYF--------------------AREVFNDMKHLDLISWNSMISSCAQSSLEE 987
Query: 138 EALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLL 197
E++ +F D+ G+ P+ TLASV+ + L + GL I I + + N+
Sbjct: 988 ESVNLFIDLLHEGLKPDHFTLASVLRACSSL--------IDGLNISRQIHVHALKTGNIA 1039
Query: 198 NMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGT 257
+ + V ++L++ ++K+G +E A LF+ D+ W
Sbjct: 1040 DSF-VATTLIDV---------------------YSKSGKMEEAEFLFQNKDDLDLACWNA 1077
Query: 258 MIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAG 317
M+ GY+ +AL ++ + G + + + ACG + +G QIH+ +KAG
Sbjct: 1078 MMFGYIIGNDGKKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAG 1137
Query: 318 FDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFN 377
FD + + I+ Y CG + + AG + FN
Sbjct: 1138 FDSDLHVNSGILDMYIKCGDM--------------------VNAGIV-----------FN 1166
Query: 378 NMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKE 437
+ D +W++MISG N + AL ++H M + V P+E T ++ A + L++
Sbjct: 1167 YISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQ 1226
Query: 438 GRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGL 497
GR H V+ + + +++DMYAKCG+I A+ +F + R ++ WNA++ GL
Sbjct: 1227 GRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIAL--WNAMLVGL 1284
Query: 498 AMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPD 557
A HG+A + ++ ++ I+ + ++FIG+LS C HAGL Y SM + Y +EP+
Sbjct: 1285 AQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLHSMPNDYGIEPE 1344
Query: 558 LKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLA 617
++HY C+VD LGRAG +++A++VI +MP KA I LL A RI G+VE G+R A L
Sbjct: 1345 IEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRALLGACRIQGDVETGKRVAARLF 1404
Query: 618 GLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
L+P + VLLSNIYA A RW+D RK M+ +K+ PGFS
Sbjct: 1405 ALEPFDSAAYVLLSNIYAAANRWDDVTDARKMMKRKNVKKDPGFS 1449
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 151/589 (25%), Positives = 273/589 (46%), Gaps = 53/589 (8%)
Query: 42 GQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIR 101
G+ H+ I SG + F+ N+L+ +Y+KCG +S A+ +FD+ D V N ++ Y
Sbjct: 640 GKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGAYAA 699
Query: 102 NDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASV 161
+ ND G AQ E L +FR +R +TLA V
Sbjct: 700 SVDSND---------------------GNAQ-----EGLHLFRLLRASLGSTTRMTLAPV 733
Query: 162 ISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNI 221
+ ++ G +W +HG IK+ ++ V +S L+N+Y C + +AR LFD M+ER++
Sbjct: 734 LKLCLNSGCLWAAEGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDV 793
Query: 222 VSWNVMLNGFAKAGLVELARELFERIP----SKDVVSWGTMIDGYLQV-----ERLSEAL 272
V WN+ML G+ + GL + A +LF D S +++G +V + L++ +
Sbjct: 794 VLWNMMLKGYVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLILNGVSEVNWDEGKWLADQV 853
Query: 273 TMYRAMLCDGIAPNDVMIVD-LISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHF 331
Y A L DV + +S C + G+ V D+ T++
Sbjct: 854 QAYAAKLSLSDDNPDVFCWNKKLSEC---LWAGDNWGAIECFVNMNGLNIDYDAVTLLVV 910
Query: 332 YAACGRINLARLQFEL-------GIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDV 384
AA + L ++ G+ ++ N+L+ + + G AR++FN+M+ D+
Sbjct: 911 LAAVAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDL 970
Query: 385 YSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASS-GTLKEGRWAHE 443
SW++MIS AQ+ ++ LF ++ G+KP+ T+ SV A +S L R H
Sbjct: 971 ISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASVLRACSSLIDGLNISRQIHV 1030
Query: 444 YVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDA 503
+ L + ++ +ID+Y+K G + A +F + D ++ WNA++ G + D
Sbjct: 1031 HALKTGNIADSFVATTLIDVYSKSGKMEEAEFLFQNKDD--LDLACWNAMMFGYIIGNDG 1088
Query: 504 NLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGER-YFKSMKSVYNVEPDLKHYG 562
L+++S + K K + IT C L+D G++ + ++K+ + + DL
Sbjct: 1089 KKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAGF--DSDLHVNS 1146
Query: 563 CMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGER 611
++D+ + G + +A V + DV W ++++ +GN + R
Sbjct: 1147 GILDMYIKCGDMVNAGIVFNYISAPDDVA-WTSMISGCVDNGNEDQALR 1194
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 145/660 (21%), Positives = 272/660 (41%), Gaps = 124/660 (18%)
Query: 20 SDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKS 79
S + L L+ C + + +H K GLE + F+ +L+N+Y+KCG
Sbjct: 724 STTRMTLAPVLKLCLNSGCLWAAEGVHGYAIKIGLEWDVFVSGALVNIYSKCG------- 776
Query: 80 MFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREA 139
R+ DAR +FD + V + M+ G+ Q +EA
Sbjct: 777 ------------------------RMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEA 812
Query: 140 LEVFRDMRILGVIPNEVTLASVISSSVHLG---GIWECRMLHGLVIKLMI-----DGF-- 189
++F + G+ P+E ++ +++ + G W + KL + D F
Sbjct: 813 FQLFSEFHRSGLRPDEFSVQLILNGVSEVNWDEGKWLADQVQAYAAKLSLSDDNPDVFCW 872
Query: 190 ------------------VIISTNLLNM-YCVCSSLV--EARSLFDEMK----------- 217
++ N LN+ Y + LV A + D+++
Sbjct: 873 NKKLSECLWAGDNWGAIECFVNMNGLNIDYDAVTLLVVLAAVAGTDDLELGKQVHGIAVK 932
Query: 218 ---ERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTM 274
+ ++ N ++N ++K G ARE+F + D++SW +MI Q E++ +
Sbjct: 933 SGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNL 992
Query: 275 YRAMLCDGIAPNDVMIVDLISACGRAMAFGEGL----QIHSIIVKAGFDCYDFIQATIIH 330
+ +L +G+ P+ + ++ AC + +GL QIH +K G F+ T+I
Sbjct: 993 FIDLLHEGLKPDHFTLASVLRACSSLI---DGLNISRQIHVHALKTGNIADSFVATTLID 1049
Query: 331 FYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAM 390
Y+ G++ A F+ +A WNA++ G+I + N+ +K
Sbjct: 1050 VYSKSGKMEEAEFLFQNKDDLDLACWNAMMFGYI----------IGNDGKK--------- 1090
Query: 391 ISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSI 450
ALELF + +G K ++IT+ + A L +G+ H + +
Sbjct: 1091 ------------ALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAGF 1138
Query: 451 TLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIY 510
+ ++++ I+DMY KCG + A VF +I W ++I G +G+ + L+IY
Sbjct: 1139 DSDLHVNSGILDMYIKCGDMVNAGIVFNYI--SAPDDVAWTSMISGCVDNGNEDQALRIY 1196
Query: 511 SDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGR 570
+ + + + TF ++ ++ G + ++ + V D +VD+ +
Sbjct: 1197 HRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVS-DPFVGTSLVDMYAK 1255
Query: 571 AGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHG--PSRV 628
G +EDA + + M ++ ++ +W +L HGN E KS+ SHG P RV
Sbjct: 1256 CGNIEDAYRLFKKMNVR-NIALWNAMLVGLAQHGNAEEAVNLFKSMK----SHGIEPDRV 1310
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 104/225 (46%), Gaps = 24/225 (10%)
Query: 431 SSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPW 490
S+ L G+ H ++ + + LS ++ MY+KCGS+++A +VF +R + W
Sbjct: 633 STHNLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPER--DLVTW 690
Query: 491 NAIICGLAM-----HGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYF 545
NAI+ A G+A L ++ L +T VL C ++G + E
Sbjct: 691 NAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVH 750
Query: 546 KSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGN 605
+ +E D+ G +V++ + G++ DA + M + DVV+W +L G
Sbjct: 751 GYAIKI-GLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRER-DVVLWNMMLK-----GY 803
Query: 606 VEVG-ERAAKSL------AGLQPSHGPSRVLL---SNIYADAGRW 640
V++G E+ A L +GL+P +++L S + D G+W
Sbjct: 804 VQLGLEKEAFQLFSEFHRSGLRPDEFSVQLILNGVSEVNWDEGKW 848
>gi|449467271|ref|XP_004151347.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic-like [Cucumis sativus]
gi|449530724|ref|XP_004172343.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
chloroplastic-like [Cucumis sativus]
Length = 543
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 160/429 (37%), Positives = 254/429 (59%), Gaps = 3/429 (0%)
Query: 235 GLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDG-IAPNDVMIVDL 293
G ++ A +F ++ + ++ SW T+I G+ Q AL ++ ML + P + +
Sbjct: 71 GNMDYAYLVFLQMQNPNLFSWNTVIRGFSQSSNPQIALYLFIDMLVSSQVEPQRLTYPSI 130
Query: 294 ISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHI 353
A + +G Q+H I+K G FI+ TI++ YA G ++ AR F ++ +
Sbjct: 131 FKAYSQLGLAHDGAQLHGRIIKLGLQFDPFIRNTILYMYATGGFLSEARRIFNQEMEFDV 190
Query: 354 ASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDA 413
SWN++I G + G I+++R+LF+ M ++ SW++MI GY +N AL+LF M +
Sbjct: 191 VSWNSMILGLAKCGEIDESRKLFDKMPVKNPISWNSMIGGYVRNGMFKEALKLFIKMQEE 250
Query: 414 GVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTA 473
++P+E TMVS+ A A G L++G W HEY+ N++ LN + AIIDMY KCGSI A
Sbjct: 251 RIQPSEFTMVSLLNASAQIGALRQGVWIHEYIKKNNLQLNAIVVTAIIDMYCKCGSIGNA 310
Query: 474 FEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCC 533
+VF I R S+S WN++I GLA++G + ++ LE ++K + I+F+ VL+ C
Sbjct: 311 LQVFEKIPCR--SLSSWNSMIFGLAVNGCEKEAILVFKMLESSSLKPDCISFMAVLTACN 368
Query: 534 HAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIW 593
H +VD G +F MK+ Y +EP +KHY MVD++ RAG LE+AE+ I++MP++ D +IW
Sbjct: 369 HGAMVDEGMEFFSRMKNTYRIEPSIKHYNLMVDMISRAGFLEEAEQFIKTMPIEKDAIIW 428
Query: 594 GTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDC 653
G LL+A RI+GN E+ +RAA+ + L P VL++NI+A + A R MR
Sbjct: 429 GCLLSACRIYGNTEMAKRAAEKVNELDPEETMGYVLMANIHAWGNNFVGAMEKRVAMRMK 488
Query: 654 GMKRLPGFS 662
+++ PG S
Sbjct: 489 KVEKEPGGS 497
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/294 (31%), Positives = 152/294 (51%), Gaps = 5/294 (1%)
Query: 122 SYTSMIMGFAQNDCWREALEVFRDMRILG-VIPNEVTLASVISSSVHLGGIWECRMLHGL 180
S+ ++I GF+Q+ + AL +F DM + V P +T S+ + LG + LHG
Sbjct: 90 SWNTVIRGFSQSSNPQIALYLFIDMLVSSQVEPQRLTYPSIFKAYSQLGLAHDGAQLHGR 149
Query: 181 VIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELA 240
+IKL + I +L MY L EAR +F++ E ++VSWN M+ G AK G ++ +
Sbjct: 150 IIKLGLQFDPFIRNTILYMYATGGFLSEARRIFNQEMEFDVVSWNSMILGLAKCGEIDES 209
Query: 241 RELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRA 300
R+LF+++P K+ +SW +MI GY++ EAL ++ M + I P++ +V L++A +
Sbjct: 210 RKLFDKMPVKNPISWNSMIGGYVRNGMFKEALKLFIKMQEERIQPSEFTMVSLLNASAQI 269
Query: 301 MAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALI 360
A +G+ IH I K + II Y CG I A FE ++SWN++I
Sbjct: 270 GALRQGVWIHEYIKKNNLQLNAIVVTAIIDMYCKCGSIGNALQVFEKIPCRSLSSWNSMI 329
Query: 361 AGFIRNGMIEDARQLFNNMQ----KRDVYSWSAMISGYAQNEQPNMALELFHGM 410
G NG ++A +F ++ K D S+ A+++ + +E F M
Sbjct: 330 FGLAVNGCEKEAILVFKMLESSSLKPDCISFMAVLTACNHGAMVDEGMEFFSRM 383
Score = 139 bits (349), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 95/386 (24%), Positives = 178/386 (46%), Gaps = 71/386 (18%)
Query: 30 LRYCSAHIAVSQ------GQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
L Y S A SQ G Q+H I K GL+ + FI+N+++ +YA G +S+A+ +F+
Sbjct: 125 LTYPSIFKAYSQLGLAHDGAQLHGRIIKLGLQFDPFIRNTILYMYATGGFLSEARRIFNQ 184
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
D V+ N MI G + ++++R++FDK P+K +S+ SMI G+ +N ++EAL++F
Sbjct: 185 EMEFDVVSWNSMILGLAKCGEIDESRKLFDKMPVKNPISWNSMIGGYVRNGMFKEALKLF 244
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
M+ + P+E T+ S++++S +G + + +H + K + I+ T +++MYC C
Sbjct: 245 IKMQEERIQPSEFTMVSLLNASAQIGALRQGVWIHEYIKKNNLQLNAIVVTAIIDMYCKC 304
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYL 263
S+ A +F+++ R++ SWN M+ G A G +
Sbjct: 305 GSIGNALQVFEKIPCRSLSSWNSMIFGLAVNGCEK------------------------- 339
Query: 264 QVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDF 323
EA+ +++ + + P+ + + +++AC EG++ S
Sbjct: 340 ------EAILVFKMLESSSLKPDCISFMAVLTACNHGAMVDEGMEFFS------------ 381
Query: 324 IQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ-KR 382
R++ I+ I +N ++ R G +E+A Q M ++
Sbjct: 382 ------------------RMKNTYRIEPSIKHYNLMVDMISRAGFLEEAEQFIKTMPIEK 423
Query: 383 DVYSWSAMISG---YAQNEQPNMALE 405
D W ++S Y E A E
Sbjct: 424 DAIIWGCLLSACRIYGNTEMAKRAAE 449
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 107/250 (42%), Gaps = 64/250 (25%)
Query: 13 QKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCG 72
Q+ +Q S E +VS L + A+ QG IH I K+ L+ N + ++I++Y KCG
Sbjct: 248 QEERIQPS--EFTMVSLLNASAQIGALRQGVWIHEYIKKNNLQLNAIVVTAIIDMYCKCG 305
Query: 73 LISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQ 132
I +A +VF+K P + S+ SMI G A
Sbjct: 306 SIG-------------------------------NALQVFEKIPCRSLSSWNSMIFGLAV 334
Query: 133 NDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVII 192
N C +EA+ VF+ + + P+ ++ +V+++ H M+D +
Sbjct: 335 NGCEKEAILVFKMLESSSLKPDCISFMAVLTACNH---------------GAMVDEGMEF 379
Query: 193 STNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIP-SKD 251
+ + N Y + E +I +N+M++ ++AG +E A + + +P KD
Sbjct: 380 FSRMKNTYRI---------------EPSIKHYNLMVDMISRAGFLEEAEQFIKTMPIEKD 424
Query: 252 VVSWGTMIDG 261
+ WG ++
Sbjct: 425 AIIWGCLLSA 434
>gi|297743497|emb|CBI36364.3| unnamed protein product [Vitis vinifera]
Length = 832
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 195/691 (28%), Positives = 327/691 (47%), Gaps = 112/691 (16%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
L S ++ C + +G+ IH+ + +G + ++ ++ LYA+ G +
Sbjct: 72 LPYSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCL--------- 122
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
D L AR++F++ P + ++ +MI+ +A+ D + EA +F
Sbjct: 123 -------------------DDLCYARKLFEEMPERNLTAWNTMILAYARVDDYMEAWGIF 163
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
M +GV P+ T AS + L + +H +I G + L++MY C
Sbjct: 164 DRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKC 223
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYL 263
+FDEM ER + V+W ++I
Sbjct: 224 DDEESCLKVFDEMGER-------------------------------NQVTWNSIISAEA 252
Query: 264 QVERLSEALTMYRAMLC--DGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCY 321
Q ++AL ++ M DGI P+ L++ C +G QIH+ +++A
Sbjct: 253 QFGHFNDALVLFLRMQESEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKN 312
Query: 322 DFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ- 380
++ ++H Y+ CGR+N A+ F + + SWN++I G+ +NG ++A +LF MQ
Sbjct: 313 IIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQL 372
Query: 381 ---KRDVYSWSAMISGYAQNEQPNMALELFHGMV-------------------------- 411
K D +S S+M+S EL + +V
Sbjct: 373 NGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDY 432
Query: 412 -----DAGVKPNEITMV--SVFCAIASSGTLKEGRWAH---------EYVLNNSITLND- 454
D +K + T + S+ A+ G LK+ + H EY + +T+ +
Sbjct: 433 AWKVYDQTIKKDRNTALWNSILAGYANKG-LKKESFNHFLEMLESDIEYDVLTMVTIVNL 491
Query: 455 -NLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDL 513
L A++DMY+KCG+I A VF ++ + ++ WNA+I G + HG + L +Y ++
Sbjct: 492 LVLETALVDMYSKCGAITKARTVFDNMNGK--NIVSWNAMISGYSKHGCSKEALILYEEM 549
Query: 514 EKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQ 573
K+ + N +TF+ +LS C H GLV+ G R F SM+ YN+E +HY CMVDLLGRAG+
Sbjct: 550 PKKGMYPNEVTFLAILSACSHTGLVEEGLRIFTSMQEDYNIEAKAEHYTCMVDLLGRAGR 609
Query: 574 LEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNI 633
LEDA+E + MP++ +V WG LL A R+H ++++G AA+ L L P + V++SNI
Sbjct: 610 LEDAKEFVEKMPIEPEVSTWGALLGACRVHKDMDMGRLAAQRLFELDPQNPGPYVIMSNI 669
Query: 634 YADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
YA AGRW++ IR+ M+ G+K+ PG S +
Sbjct: 670 YAAAGRWKEVEDIRQMMKMKGVKKDPGVSWI 700
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 96/393 (24%), Positives = 176/393 (44%), Gaps = 88/393 (22%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
+ + L C+ +QG+QIH+ + ++ + N ++ L+++Y++CG
Sbjct: 278 QFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECG---------- 327
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
RLN A+E+F++ + S+ SMI G+ QN +EAL +
Sbjct: 328 ---------------------RLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRL 366
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
F+ M++ G+ P+ +L+S++SS V L + R LH +++ ++ I+ L++MY
Sbjct: 367 FKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVDMYAK 426
Query: 203 CSSLVEARSLFDEM--KERNIVSWNVMLNGFAKAGL------------------------ 236
C S+ A ++D+ K+RN WN +L G+A GL
Sbjct: 427 CGSMDYAWKVYDQTIKKDRNTALWNSILAGYANKGLKKESFNHFLEMLESDIEYDVLTMV 486
Query: 237 ---------------------VELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMY 275
+ AR +F+ + K++VSW MI GY + EAL +Y
Sbjct: 487 TIVNLLVLETALVDMYSKCGAITKARTVFDNMNGKNIVSWNAMISGYSKHGCSKEALILY 546
Query: 276 RAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSII-----VKAGFDCYDFIQATIIH 330
M G+ PN+V + ++SAC EGL+I + + ++A + Y ++
Sbjct: 547 EEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRIFTSMQEDYNIEAKAEHY----TCMVD 602
Query: 331 FYAACGRINLARLQFE-LGIKDHIASWNALIAG 362
GR+ A+ E + I+ +++W AL+
Sbjct: 603 LLGRAGRLEDAKEFVEKMPIEPEVSTWGALLGA 635
>gi|297739912|emb|CBI30094.3| unnamed protein product [Vitis vinifera]
Length = 614
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 170/501 (33%), Positives = 273/501 (54%), Gaps = 25/501 (4%)
Query: 169 GGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMK-ERNIVSWNVM 227
G I E R L M + VI T +++ Y C + EAR LFD + ++N+V+W M
Sbjct: 81 GRIMEARRL----FDEMREPDVITWTTVISGYIKCGMIEEARRLFDRVDAKKNVVTWTAM 136
Query: 228 LNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAP-N 286
+ G+ ++ + A +LF +P+K+VVSW TMIDGY Q R+ A+ ++ M + N
Sbjct: 137 VGGYIRSNKISDAEKLFNEMPNKNVVSWNTMIDGYAQNGRIDSAMYLFEKMPERNVVSWN 196
Query: 287 DVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAA--CGRINLARLQ 344
VM +++ CGR ++ +D + + + A G ++ A
Sbjct: 197 TVM--SMLAQCGR--------------IEEARRLFDRMPERDVISWTAMIAGLLDEALDL 240
Query: 345 FELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMAL 404
FE + + SWN +I G I+NG + AR+LFN M K++V SW+ MI+G Q + AL
Sbjct: 241 FERMPERDLPSWNTMITGLIQNGDLRRARKLFNEMPKKNVISWTTMITGCVQEGESEEAL 300
Query: 405 ELFHGMVDA-GVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDM 463
++F M+ G KPN+ T VSV A ++ L EG+ H+ + + + +A+I+M
Sbjct: 301 KIFSRMLSTNGAKPNQGTFVSVLGACSNLAGLGEGQQVHQIISKTVYQDSTFVVSALINM 360
Query: 464 YAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSI 523
Y+KCG + TA ++F + WN II A HG + + ++ K K + +
Sbjct: 361 YSKCGELGTARKMFDDGMTSQRDLVSWNGIIAAYAHHGYGKEAINFFKEMRKSGFKPDDV 420
Query: 524 TFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRS 583
T++G+LS C HAGLV+ G +YF + ++ HY C+VDL GRAG+L++A I
Sbjct: 421 TYVGLLSACSHAGLVEEGLKYFDELVKDRSILVREDHYACLVDLCGRAGRLKEAFGFIER 480
Query: 584 MPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDA 643
+ K +WG LLA +H NV++G++AAK L ++P + + +LLSNIYA G+W +A
Sbjct: 481 LETKPSARVWGALLAGCNVHANVKIGKQAAKKLLEVEPENAGTYLLLSNIYASTGKWREA 540
Query: 644 FSIRKEMRDCGMKRLPGFSGV 664
+R +M+D G+K+ PG S +
Sbjct: 541 ARVRLKMKDKGLKKQPGCSWI 561
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 132/462 (28%), Positives = 227/462 (49%), Gaps = 50/462 (10%)
Query: 49 IFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSC-STLDPVACNIMISGYIRNDRLND 107
+F E + ++I+ Y KCG+I +A+ +FD + + V M+ GYIR+++++D
Sbjct: 89 LFDEMREPDVITWTTVISGYIKCGMIEEARRLFDRVDAKKNVVTWTAMVGGYIRSNKISD 148
Query: 108 AREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVH 167
A ++F++ P K VS+ +MI G+AQN A+ +F M V V+ +V+S
Sbjct: 149 AEKLFNEMPNKNVVSWNTMIDGYAQNGRIDSAMYLFEKMPERNV----VSWNTVMSMLAQ 204
Query: 168 LGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVM 227
G I E R L + + + + + LL+ EA LF+ M ER++ SWN M
Sbjct: 205 CGRIEEARRLFDRMPERDVISWTAMIAGLLD---------EALDLFERMPERDLPSWNTM 255
Query: 228 LNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAML-CDGIAPN 286
+ G + G + AR+LF +P K+V+SW TMI G +Q EAL ++ ML +G PN
Sbjct: 256 ITGLIQNGDLRRARKLFNEMPKKNVISWTTMITGCVQEGESEEALKIFSRMLSTNGAKPN 315
Query: 287 DVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFE 346
V ++ AC GEG Q+H II K + F+ + +I+ Y+ CG + AR F+
Sbjct: 316 QGTFVSVLGACSNLAGLGEGQQVHQIISKTVYQDSTFVVSALINMYSKCGELGTARKMFD 375
Query: 347 LGIKDH--IASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMAL 404
G+ + SWN +IA + +G ++A F M+K
Sbjct: 376 DGMTSQRDLVSWNGIIAAYAHHGYGKEAINFFKEMRK----------------------- 412
Query: 405 ELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG-RWAHEYVLNNSITLNDNLSAAIIDM 463
+G KP+++T V + A + +G ++EG ++ E V + SI + ++ A ++D+
Sbjct: 413 --------SGFKPDDVTYVGLLSACSHAGLVEEGLKYFDELVKDRSILVREDHYACLVDL 464
Query: 464 YAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANL 505
+ G + AF + + S W A++ G +H + +
Sbjct: 465 CGRAGRLKEAFGFIERLETK-PSARVWGALLAGCNVHANVKI 505
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 74/149 (49%), Gaps = 29/149 (19%)
Query: 25 ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSC 84
VS L CS + +GQQ+H +I K+ + +TF+ ++LIN+Y+KCG + A+ MFD
Sbjct: 318 TFVSVLGACSNLAGLGEGQQVHQIISKTVYQDSTFVVSALINMYSKCGELGTARKMFD-- 375
Query: 85 STLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFR 144
D + R++ VS+ +I +A + +EA+ F+
Sbjct: 376 ------------------DGMTSQRDL---------VSWNGIIAAYAHHGYGKEAINFFK 408
Query: 145 DMRILGVIPNEVTLASVISSSVHLGGIWE 173
+MR G P++VT ++S+ H G + E
Sbjct: 409 EMRKSGFKPDDVTYVGLLSACSHAGLVEE 437
>gi|356559933|ref|XP_003548250.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g08510-like [Glycine max]
Length = 512
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 162/428 (37%), Positives = 243/428 (56%), Gaps = 3/428 (0%)
Query: 237 VELARELFERIPSKDVVSWGTMIDGYL-QVERLSEALTMYRAMLCDGIAPNDVMIVDLIS 295
+ A ++ P + + +I Y + + ++Y ML PN L S
Sbjct: 32 LHYAHKVLHHSPKPTLFLYNKLIQAYSSHPQHQHQCFSLYSQMLLHSFLPNQHTFNFLFS 91
Query: 296 ACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIAS 355
AC + G +H+ +K+GF+ F ++ Y G + LAR F+ + +
Sbjct: 92 ACTSLSSPSLGQMLHTHFIKSGFEPDLFAATALLDMYTKVGTLELARKLFDQMPVRGVPT 151
Query: 356 WNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGM-VDAG 414
WNA++AG R G ++ A +LF M R+V SW+ MISGY+++++ AL LF M + G
Sbjct: 152 WNAMMAGHARFGDMDVALELFRLMPSRNVVSWTTMISGYSRSKKYGEALGLFLRMEQEKG 211
Query: 415 VKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAF 474
+ PN +T+ S+F A A+ G L+ G+ Y N N +S A+++MYAKCG I+ A+
Sbjct: 212 MMPNAVTLASIFPAFANLGALEIGQRVEAYARKNGFFKNLYVSNAVLEMYAKCGKIDVAW 271
Query: 475 EVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCH 534
+VF I ++ WN++I GLA+HG+ TLK+Y + + +TF+G+L C H
Sbjct: 272 KVFNEI-GSLRNLCSWNSMIMGLAVHGECCKTLKLYDQMLGEGTSPDDVTFVGLLLACTH 330
Query: 535 AGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWG 594
G+V+ G FKSM + +N+ P L+HYGCMVDLLGRAGQL +A EVI+ MPMK D VIWG
Sbjct: 331 GGMVEKGRHIFKSMTTSFNIIPKLEHYGCMVDLLGRAGQLREAYEVIQRMPMKPDSVIWG 390
Query: 595 TLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCG 654
LL A H NVE+ E AA+SL L+P + + V+LSNIYA AG+W+ +RK M+
Sbjct: 391 ALLGACSFHDNVELAEIAAESLFALEPWNPGNYVILSNIYASAGQWDGVAKLRKVMKGSK 450
Query: 655 MKRLPGFS 662
+ + G S
Sbjct: 451 ITKSAGHS 458
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 106/418 (25%), Positives = 192/418 (45%), Gaps = 38/418 (9%)
Query: 93 NIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWR-EALEVFRDMRILGV 151
I+I + L+ A +V +P Y +I ++ + + + ++ M +
Sbjct: 20 KILIEKLLEIPNLHYAHKVLHHSPKPTLFLYNKLIQAYSSHPQHQHQCFSLYSQMLLHSF 79
Query: 152 IPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARS 211
+PN+ T + S+ L +MLH IK + + +T LL+MY +L AR
Sbjct: 80 LPNQHTFNFLFSACTSLSSPSLGQMLHTHFIKSGFEPDLFAATALLDMYTKVGTLELARK 139
Query: 212 LFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEA 271
LFD+M R + +WN M+ G A+ G +++A ELF +PS++VVSW TMI GY + ++ EA
Sbjct: 140 LFDQMPVRGVPTWNAMMAGHARFGDMDVALELFRLMPSRNVVSWTTMISGYSRSKKYGEA 199
Query: 272 LTMYRAMLCD-GIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIH 330
L ++ M + G+ PN V + + A A G ++ + K GF ++ ++
Sbjct: 200 LGLFLRMEQEKGMMPNAVTLASIFPAFANLGALEIGQRVEAYARKNGFFKNLYVSNAVLE 259
Query: 331 FYAACGRINLARLQF-ELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSA 389
YA CG+I++A F E+G ++ SWN++I G +G
Sbjct: 260 MYAKCGKIDVAWKVFNEIGSLRNLCSWNSMIMGLAVHG---------------------- 297
Query: 390 MISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNS 449
+ L+L+ M+ G P+++T V + A G +++GR + + S
Sbjct: 298 ---------ECCKTLKLYDQMLGEGTSPDDVTFVGLLLACTHGGMVEKGRHIFK-SMTTS 347
Query: 450 ITLNDNLS--AAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANL 505
+ L ++D+ + G + A+EV + + SV W A++ + H + L
Sbjct: 348 FNIIPKLEHYGCMVDLLGRAGQLREAYEVIQRMPMKPDSVI-WGALLGACSFHDNVEL 404
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 134/282 (47%), Gaps = 39/282 (13%)
Query: 33 CSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVAC 92
C++ + S GQ +H+ KSG E + F +L+++Y K G + A+ +FD
Sbjct: 93 CTSLSSPSLGQMLHTHFIKSGFEPDLFAATALLDMYTKVGTLELARKLFDQMPVRGVPTW 152
Query: 93 NIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDM-RILGV 151
N M++G+ R ++ A E+F P + VS+T+MI G++++ + EAL +F M + G+
Sbjct: 153 NAMMAGHARFGDMDVALELFRLMPSRNVVSWTTMISGYSRSKKYGEALGLFLRMEQEKGM 212
Query: 152 IPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGF---VIISTNLLNMYCVCSSLVE 208
+PN VTLAS+ + +LG + + + K +GF + +S +L MY C +
Sbjct: 213 MPNAVTLASIFPAFANLGALEIGQRVEAYARK---NGFFKNLYVSNAVLEMYAKCGKIDV 269
Query: 209 ARSLFDEMKE-RNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVER 267
A +F+E+ RN+ SWN M+ G A G
Sbjct: 270 AWKVFNEIGSLRNLCSWNSMIMGLAVHG-------------------------------E 298
Query: 268 LSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQI 309
+ L +Y ML +G +P+DV V L+ AC +G I
Sbjct: 299 CCKTLKLYDQMLGEGTSPDDVTFVGLLLACTHGGMVEKGRHI 340
>gi|224065565|ref|XP_002301860.1| predicted protein [Populus trichocarpa]
gi|222843586|gb|EEE81133.1| predicted protein [Populus trichocarpa]
Length = 933
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 157/453 (34%), Positives = 258/453 (56%), Gaps = 34/453 (7%)
Query: 244 FERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAF 303
+ ++ +V + MI G++Q + +AL +Y ML ++P LI ACG
Sbjct: 37 YTQMEIPNVFVYNAMIKGFVQSYQPVQALELYVQMLRANVSPTSYTFPSLIKACGLVSQL 96
Query: 304 GEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRIN-----------------------L 340
+H + + GFD + F+Q +++ FY++ GRI L
Sbjct: 97 RFAEAVHGHVWRNGFDSHVFVQTSLVDFYSSMGRIEESVRVFDEMPERDVFAWTTMVSGL 156
Query: 341 ARLQ--------FELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMIS 392
R+ F++ ++A+WN LI G+ R ++ A LFN M RD+ SW+ MI+
Sbjct: 157 VRVGDMSSAGRLFDMMPDRNLATWNTLIDGYARLREVDVAELLFNQMPARDIISWTTMIN 216
Query: 393 GYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITL 452
Y+QN++ AL +F+ M G+ P+E+TM +V A A G L G+ H Y++ + L
Sbjct: 217 CYSQNKRFREALGVFNEMAKHGISPDEVTMATVISACAHLGALDLGKEIHYYIMQHGFNL 276
Query: 453 NDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSD 512
+ + +A+IDMYAKCGS++ + +F+ +R++ ++ WN++I GLA+HG A L ++
Sbjct: 277 DVYIGSALIDMYAKCGSLDRSLLMFFKLREK--NLFCWNSVIEGLAVHGYAEEALAMFDK 334
Query: 513 LEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAG 572
+E+ IK N +TF+ VLS C HAGL++ G + F SM +++ P ++HYGCMVDLL +AG
Sbjct: 335 MEREKIKPNGVTFVSVLSACNHAGLIEEGRKRFASMTRDHSIPPGVEHYGCMVDLLSKAG 394
Query: 573 QLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSN 632
LE+A ++IR+M ++ + VIWG LL+ ++H N+E+ + AA L L+P + LL N
Sbjct: 395 LLEEALQLIRTMKLEPNAVIWGALLSGCKLHRNLEIAQVAANKLMVLEPGNSGYYTLLVN 454
Query: 633 IYADAGRWEDAFSIRKEMRDCGM-KRLPGFSGV 664
+ A+ RW +A IR M++ G+ KR PG S +
Sbjct: 455 MNAEVNRWGEAAKIRLTMKEQGVEKRCPGSSWI 487
Score = 169 bits (428), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 123/476 (25%), Positives = 216/476 (45%), Gaps = 74/476 (15%)
Query: 80 MFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREA 139
M + + D N IS +R++ A + + I Y +MI GF Q+ +A
Sbjct: 5 MVKTNTNQDCYLMNQFISALSTFNRMDYAVLAYTQMEIPNVFVYNAMIKGFVQSYQPVQA 64
Query: 140 LEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNM 199
LE++ M V P T S+I + + + +HG V + D V + T+L++
Sbjct: 65 LELYVQMLRANVSPTSYTFPSLIKACGLVSQLRFAEAVHGHVWRNGFDSHVFVQTSLVDF 124
Query: 200 YCVCSSLVEARSLFDEMKER-------------------------------NIVSWNVML 228
Y + E+ +FDEM ER N+ +WN ++
Sbjct: 125 YSSMGRIEESVRVFDEMPERDVFAWTTMVSGLVRVGDMSSAGRLFDMMPDRNLATWNTLI 184
Query: 229 NGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDV 288
+G+A+ V++A LF ++P++D++SW TMI+ Y Q +R EAL ++ M GI+P++V
Sbjct: 185 DGYARLREVDVAELLFNQMPARDIISWTTMINCYSQNKRFREALGVFNEMAKHGISPDEV 244
Query: 289 MIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELG 348
+ +ISAC A G +IH I++ GF+ +I + +I YA CG ++ + L F
Sbjct: 245 TMATVISACAHLGALDLGKEIHYYIMQHGFNLDVYIGSALIDMYAKCGSLDRSLLMFFKL 304
Query: 349 IKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFH 408
+ ++ WN++I G +G E+A +F+ M++
Sbjct: 305 REKNLFCWNSVIEGLAVHGYAEEALAMFDKMEREK------------------------- 339
Query: 409 GMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVL-NNSITLNDNLSAAIIDMYAKC 467
+KPN +T VSV A +G ++EGR + ++SI ++D+ +K
Sbjct: 340 ------IKPNGVTFVSVLSACNHAGLIEEGRKRFASMTRDHSIPPGVEHYGCMVDLLSKA 393
Query: 468 GSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSI 523
G + A ++ RT + P NA+I G + G K++ +LE + N +
Sbjct: 394 GLLEEALQLI-----RTMKLEP-NAVIWGALLSG-----CKLHRNLEIAQVAANKL 438
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 105/419 (25%), Positives = 180/419 (42%), Gaps = 109/419 (26%)
Query: 14 KANLQNSDYEL-------ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLIN 66
+AN+ + Y LVS LR+ A +H ++++G +S+ F+Q SL++
Sbjct: 73 RANVSPTSYTFPSLIKACGLVSQLRFAEA---------VHGHVWRNGFDSHVFVQTSLVD 123
Query: 67 LYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDA------------------ 108
Y+ G I ++ +FD D A M+SG +R ++ A
Sbjct: 124 FYSSMGRIEESVRVFDEMPERDVFAWTTMVSGLVRVGDMSSAGRLFDMMPDRNLATWNTL 183
Query: 109 -------REV------FDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNE 155
REV F++ P + +S+T+MI ++QN +REAL VF +M G+ P+E
Sbjct: 184 IDGYARLREVDVAELLFNQMPARDIISWTTMINCYSQNKRFREALGVFNEMAKHGISPDE 243
Query: 156 VTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDE 215
VT+A+VIS+ HLG + + +H +++ + V I + L++MY C SL + +F +
Sbjct: 244 VTMATVISACAHLGALDLGKEIHYYIMQHGFNLDVYIGSALIDMYAKCGSLDRSLLMFFK 303
Query: 216 MKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMY 275
++E+N+ WN ++ G A G E EAL M+
Sbjct: 304 LREKNLFCWNSVIEGLAVHGYAE-------------------------------EALAMF 332
Query: 276 RAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAAC 335
M + I PN V V ++SAC A E
Sbjct: 333 DKMEREKIKPNGVTFVSVLSACNHAGLIEE------------------------------ 362
Query: 336 GRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ-KRDVYSWSAMISG 393
GR A + + I + + ++ + G++E+A QL M+ + + W A++SG
Sbjct: 363 GRKRFASMTRDHSIPPGVEHYGCMVDLLSKAGLLEEALQLIRTMKLEPNAVIWGALLSG 421
>gi|359480506|ref|XP_003632478.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 590
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 179/519 (34%), Positives = 268/519 (51%), Gaps = 41/519 (7%)
Query: 175 RMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKA 234
R H L IKL V + ++ AR LFDEM R+ VSWN ++ G+ K
Sbjct: 32 RQFHPLSIKLFSTQDVYAFNVQIGNLARAGNIGAARQLFDEMPHRDTVSWNSIITGYWKN 91
Query: 235 GLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLI 294
G + ++ LF +P+K+VVSW +MI G ++ ER+ EA ++AM A + MI L+
Sbjct: 92 GCFDESKRLFGLMPTKNVVSWNSMIAGCIEDERIDEAWQYFQAMPQRNTASWNAMISGLV 151
Query: 295 SACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIA 354
R E ++ + + Y ++ YA G I AR F + ++
Sbjct: 152 ----RYDRVEEASRLFEEMPRRNVISY----TAMVDGYAKIGEIEQARALFNCMPQKNVV 203
Query: 355 SWNALIAGFIRNGMIEDARQLFNNMQK-------------------------------RD 383
SW +I+G++ NG ++A LF M RD
Sbjct: 204 SWTVMISGYVENGKFDEAENLFEQMPDKNIVAMTAMITGYCKEGKTDKAKILFDQIPCRD 263
Query: 384 VYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHE 443
+ SW+AMI+GYAQN AL+L M+ G++P+ T++SV A +S +L+EGR H
Sbjct: 264 LASWNAMITGYAQNGSGEEALKLHSQMLKMGMQPDHSTLISVLTACSSLASLQEGRKTHV 323
Query: 444 YVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDA 503
VL + ++ A+I MY KCGSI + F I D VS WNA+I A HG
Sbjct: 324 LVLKSGYESRISICNALITMYCKCGSILDSELAFRQI-DHPDVVS-WNAMIAAFARHGFY 381
Query: 504 NLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGC 563
+ L + ++ ++ + ITF+ +LS C HAG V +F SM Y + P +H+ C
Sbjct: 382 DRALASFGEMRSNRVEPDGITFLSLLSACGHAGKVHESLNWFNSMIESYKIVPRPEHFAC 441
Query: 564 MVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSH 623
+VD+L R GQ+E A ++I+ MP +AD IWG LLAA +H NV++GE AAK + L+P +
Sbjct: 442 LVDILSRGGQVEKAYKIIQEMPFEADCGIWGALLAACHVHLNVKLGELAAKKIVELEPQN 501
Query: 624 GPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
+ V+LSNIYA AG W + +R MR+ G+K+ P +S
Sbjct: 502 SGAYVVLSNIYAAAGMWGEVTRVRGLMREQGVKKQPAYS 540
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 131/516 (25%), Positives = 229/516 (44%), Gaps = 45/516 (8%)
Query: 6 FHSVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLI 65
FHS FN Q L + V A ++A + +F +T NS+I
Sbjct: 27 FHS-FNRQFHPLSIKLFSTQDVYAFNVQIGNLARAGNIGAARQLFDEMPHRDTVSWNSII 85
Query: 66 NLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTS 125
Y K G ++K +F T + V+ N MI+G I ++R+++A + F P + S+ +
Sbjct: 86 TGYWKNGCFDESKRLFGLMPTKNVVSWNSMIAGCIEDERIDEAWQYFQAMPQRNTASWNA 145
Query: 126 MIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLM 185
MI G + D EA +F +M VI + +++ +G I + R L M
Sbjct: 146 MISGLVRYDRVEEASRLFEEMPRRNVI----SYTAMVDGYAKIGEIEQARAL----FNCM 197
Query: 186 IDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFE 245
V+ T +++ Y EA +LF++M ++NIV+ M+ G+ K G + A+ LF+
Sbjct: 198 PQKNVVSWTVMISGYVENGKFDEAENLFEQMPDKNIVAMTAMITGYCKEGKTDKAKILFD 257
Query: 246 RIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGE 305
+IP +D+ SW MI GY Q EAL ++ ML G+ P+ ++ +++AC + E
Sbjct: 258 QIPCRDLASWNAMITGYAQNGSGEEALKLHSQMLKMGMQPDHSTLISVLTACSSLASLQE 317
Query: 306 GLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIR 365
G + H +++K+G++ I +I Y CG I + L F + SWNA+IA F R
Sbjct: 318 GRKTHVLVLKSGYESRISICNALITMYCKCGSILDSELAFRQIDHPDVVSWNAMIAAFAR 377
Query: 366 NGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSV 425
+G + A F M+ V+P+ IT +S+
Sbjct: 378 HGFYDRALASFGEMRSNR-------------------------------VEPDGITFLSL 406
Query: 426 FCAIASSGTLKEG-RWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRT 484
A +G + E W + + + I A ++D+ ++ G + A+++ +
Sbjct: 407 LSACGHAGKVHESLNWFNSMIESYKIVPRPEHFACLVDILSRGGQVEKAYKIIQEM-PFE 465
Query: 485 TSVSPWNAIICGLAMHGD---ANLTLKIYSDLEKRN 517
W A++ +H + L K +LE +N
Sbjct: 466 ADCGIWGALLAACHVHLNVKLGELAAKKIVELEPQN 501
>gi|297848882|ref|XP_002892322.1| hypothetical protein ARALYDRAFT_311694 [Arabidopsis lyrata subsp.
lyrata]
gi|297338164|gb|EFH68581.1| hypothetical protein ARALYDRAFT_311694 [Arabidopsis lyrata subsp.
lyrata]
Length = 1329
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 169/498 (33%), Positives = 271/498 (54%), Gaps = 38/498 (7%)
Query: 201 CVCSSLVEAR--SLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTM 258
C L+E+ ++ + +N N + + ++LA ++ +V + +
Sbjct: 790 CSTPKLLESALAAMIKTSQTQNCYLMNQFITACSSFNRLDLAVSFMTQMQKPNVFVYNAL 849
Query: 259 IDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGF 318
I G++ +L Y ML D ++P+ L+ A A FGE LQ H I K GF
Sbjct: 850 IKGFVTCSHPIRSLEFYVRMLRDSVSPSSYTYSSLVQASAFASGFGESLQAH--IWKFGF 907
Query: 319 DCYDFIQATIIHFYAACGRINLARLQF-ELGIKDHI------------------------ 353
+ IQ T+I FY+A GRI AR F E+ +D +
Sbjct: 908 GFHVQIQTTLIGFYSASGRIREARKVFDEMPERDDVTWTTMVSAYRQVLDMDSANSLANQ 967
Query: 354 ------ASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELF 407
A+WN LI G+ R G +E A LFN M +D+ SW+ MI+GY++N++ A+ +F
Sbjct: 968 MPEKNEATWNCLIDGYTRLGNLELAESLFNQMPVKDIISWTTMINGYSRNKRYREAIAVF 1027
Query: 408 HGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKC 467
+ M++ G+ P+E+TM +V A A G L+ G+ H Y + N L+ + +A++DMY+KC
Sbjct: 1028 YKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTVQNGFVLDVYIGSALVDMYSKC 1087
Query: 468 GSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIG 527
GS+ A VF+++ + ++ WN+II GLA HG A LK+++ +E ++K N++TF+
Sbjct: 1088 GSLERALLVFFNLPKK--NLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNTVTFVS 1145
Query: 528 VLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMK 587
V + C HAGLV+ G R ++SM Y++ +++HYGCMV L +AG + +A E+I SM +
Sbjct: 1146 VFTACTHAGLVEEGRRIYRSMIDDYSIVSNVEHYGCMVHLFSKAGLIYEALELIGSMEFE 1205
Query: 588 ADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIR 647
+ VIWG LL RIH N+E+ E A L L+P + LL ++YA+ RW D IR
Sbjct: 1206 PNAVIWGALLDGCRIHKNLEIAEIAFNKLMILEPMNSGYYFLLVSMYAEQNRWRDVAEIR 1265
Query: 648 KEMRDCGMKRL-PGFSGV 664
MR+ G++++ PG S +
Sbjct: 1266 GRMRELGIEKICPGTSSI 1283
Score = 162 bits (409), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 127/500 (25%), Positives = 217/500 (43%), Gaps = 76/500 (15%)
Query: 73 LISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQ 132
L S +M + T + N I+ +RL+ A + Y ++I GF
Sbjct: 796 LESALAAMIKTSQTQNCYLMNQFITACSSFNRLDLAVSFMTQMQKPNVFVYNALIKGFVT 855
Query: 133 NDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVII 192
+LE + M V P+ T +S++ +S G E H + K V I
Sbjct: 856 CSHPIRSLEFYVRMLRDSVSPSSYTYSSLVQASAFASGFGESLQAH--IWKFGFGFHVQI 913
Query: 193 STNLLNMYCVCSSLVEARSLFDEMKER-------------------------------NI 221
T L+ Y + EAR +FDEM ER N
Sbjct: 914 QTTLIGFYSASGRIREARKVFDEMPERDDVTWTTMVSAYRQVLDMDSANSLANQMPEKNE 973
Query: 222 VSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCD 281
+WN +++G+ + G +ELA LF ++P KD++SW TMI+GY + +R EA+ ++ M+ +
Sbjct: 974 ATWNCLIDGYTRLGNLELAESLFNQMPVKDIISWTTMINGYSRNKRYREAIAVFYKMMEE 1033
Query: 282 GIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLA 341
GI P++V + +ISAC G ++H V+ GF +I + ++ Y+ CG + A
Sbjct: 1034 GIIPDEVTMSTVISACAHLGVLEIGKEVHMYTVQNGFVLDVYIGSALVDMYSKCGSLERA 1093
Query: 342 RLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPN 401
L F K ++ WN++I G +G ++A ++F M+
Sbjct: 1094 LLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEME------------------- 1134
Query: 402 MALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNN-SITLNDNLSAAI 460
VKPN +T VSVF A +G ++EGR + ++++ SI N +
Sbjct: 1135 ------------SVKPNTVTFVSVFTACTHAGLVEEGRRIYRSMIDDYSIVSNVEHYGCM 1182
Query: 461 IDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKL 520
+ +++K G I A E+ + P NA+I G + G +I+ +LE I
Sbjct: 1183 VHLFSKAGLIYEALELI-----GSMEFEP-NAVIWGALLDG-----CRIHKNLEIAEIAF 1231
Query: 521 NSITFIGVLSTCCHAGLVDL 540
N + + +++ + LV +
Sbjct: 1232 NKLMILEPMNSGYYFLLVSM 1251
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 99/378 (26%), Positives = 166/378 (43%), Gaps = 78/378 (20%)
Query: 42 GQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMIS---- 97
G+ + + I+K G + IQ +LI Y+ G I +A+ +FD D V M+S
Sbjct: 895 GESLQAHIWKFGFGFHVQIQTTLIGFYSASGRIREARKVFDEMPERDDVTWTTMVSAYRQ 954
Query: 98 ---------------------------GYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGF 130
GY R L A +F++ P+K +S+T+MI G+
Sbjct: 955 VLDMDSANSLANQMPEKNEATWNCLIDGYTRLGNLELAESLFNQMPVKDIISWTTMINGY 1014
Query: 131 AQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFV 190
++N +REA+ VF M G+IP+EVT+++VIS+ HLG + + +H ++ +GFV
Sbjct: 1015 SRNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTVQ---NGFV 1071
Query: 191 I---ISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERI 247
+ I + L++MY C SL E A +F +
Sbjct: 1072 LDVYIGSALVDMYSKCGSL-------------------------------ERALLVFFNL 1100
Query: 248 PSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGL 307
P K++ W ++I+G EAL M+ M + + PN V V + +AC A EG
Sbjct: 1101 PKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNTVTFVSVFTACTHAGLVEEGR 1160
Query: 308 QIHSIIVKAGFDCYDFIQ-----ATIIHFYAACGRINLA-RLQFELGIKDHIASWNALIA 361
+I+ ++ D Y + ++H ++ G I A L + + + W AL+
Sbjct: 1161 RIYRSMI----DDYSIVSNVEHYGCMVHLFSKAGLIYEALELIGSMEFEPNAVIWGALLD 1216
Query: 362 GFIRNGMIEDARQLFNNM 379
G + +E A FN +
Sbjct: 1217 GCRIHKNLEIAEIAFNKL 1234
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 104/241 (43%), Gaps = 64/241 (26%)
Query: 23 ELALVSALRYCSAHIAVSQ-GQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMF 81
E+ + + + C AH+ V + G+++H ++G + +I ++L+++Y+KCG
Sbjct: 1039 EVTMSTVISAC-AHLGVLEIGKEVHMYTVQNGFVLDVYIGSALVDMYSKCG--------- 1088
Query: 82 DSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALE 141
L A VF P K + S+I G A + +EAL+
Sbjct: 1089 ----------------------SLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALK 1126
Query: 142 VFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYC 201
+F M + V PN VT SV ++ H G + E R ++ + MID + I+S
Sbjct: 1127 MFAKMEMESVKPNTVTFVSVFTACTHAGLVEEGRRIY----RSMIDDYSIVS-------- 1174
Query: 202 VCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIP-SKDVVSWGTMID 260
N+ + M++ F+KAGL+ A EL + + V WG ++D
Sbjct: 1175 ------------------NVEHYGCMVHLFSKAGLIYEALELIGSMEFEPNAVIWGALLD 1216
Query: 261 G 261
G
Sbjct: 1217 G 1217
>gi|357118938|ref|XP_003561204.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
mitochondrial-like [Brachypodium distachyon]
Length = 618
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 175/564 (31%), Positives = 302/564 (53%), Gaps = 54/564 (9%)
Query: 104 RLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFR--DMRILGVIPNEVTLASV 161
R++DAR +FD+TP + VS+T+++ +A +A +F D R N VT ++
Sbjct: 50 RVSDARRLFDRTPDRDVVSWTALVAAYACQGMLHDARALFDRPDAR-----RNVVTWTAL 104
Query: 162 ISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNI 221
+S G + E L G M + V+ +L Y + +A +LF+ M R+
Sbjct: 105 LSGYARAGRVDEAEALFGR----MPERNVVSWNTMLEAYTSSGRVGDACTLFNGMPVRDA 160
Query: 222 VSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCD 281
SWN++L ++G ++ AR+LF+R+P ++V++W TM+ G + ++EA ++ D
Sbjct: 161 GSWNILLAALVRSGNIDKARKLFDRMPERNVMAWTTMVAGIARSGSVNEARALF-----D 215
Query: 282 GIAPNDVMIVD-LISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINL 340
G+ +V+ + +IS R E H + +K
Sbjct: 216 GMPERNVVSWNAMISGYARNHMIDEA---HDLFMK------------------------- 247
Query: 341 ARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQP 400
+ +D IASWN +I GFI+N +E A++LF+ M +R+V +W+ M++GY Q+ Q
Sbjct: 248 ------MPTRD-IASWNIMITGFIQNKNLERAQELFDKMPRRNVVTWTTMMNGYLQSIQS 300
Query: 401 NMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAI 460
AL+LF+GM+ G++PN++T + A ++ L EG+ H+ + + + + +
Sbjct: 301 ETALQLFNGMLIDGIRPNQVTFLGAVDACSNLAGLSEGQQVHQMICKTPFQFDTFIESTL 360
Query: 461 IDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKL 520
+++YAKCG I A +VF +++ V WN +I A HG + +Y +++ K
Sbjct: 361 MNLYAKCGEIILARKVFNLSKEK--DVISWNGMIAAYAHHGVGLEAIHLYEKMQENGYKP 418
Query: 521 NSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEV 580
N +T++G+LS C H+GLVD G R F+ M ++ +HY C++DL RAG+L DA+ +
Sbjct: 419 NDVTYVGLLSACSHSGLVDEGLRIFEYMVKDRSIAVRDEHYTCLIDLCSRAGRLGDAKRL 478
Query: 581 IRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRW 640
I + ++ +W LL HGN +G+ AA++L +P++ + LL NIYA AG+W
Sbjct: 479 IHFLKVEPSSTVWNALLGGCNSHGNESIGDLAARNLLEAEPNNAGTYTLLCNIYASAGKW 538
Query: 641 EDAFSIRKEMRDCGMKRLPGFSGV 664
++A IR EM D G+K+ PG S +
Sbjct: 539 KEAAKIRSEMNDRGLKKQPGCSWI 562
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 136/487 (27%), Positives = 228/487 (46%), Gaps = 77/487 (15%)
Query: 49 IFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDA 108
+F E N N+++ Y G + A ++F+ D + NI+++ +R+ ++ A
Sbjct: 120 LFGRMPERNVVSWNTMLEAYTSSGRVGDACTLFNGMPVRDAGSWNILLAALVRSGNIDKA 179
Query: 109 REVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHL 168
R++FD+ P + +++T+M+ G A++ EA +F M V+
Sbjct: 180 RKLFDRMPERNVMAWTTMVAGIARSGSVNEARALFDGMPERNVVS--------------- 224
Query: 169 GGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVML 228
W M+ G MID EA LF +M R+I SWN+M+
Sbjct: 225 ---WNA-MISGYARNHMID--------------------EAHDLFMKMPTRDIASWNIMI 260
Query: 229 NGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDV 288
GF + +E A+ELF+++P ++VV+W TM++GYLQ + AL ++ ML DGI PN V
Sbjct: 261 TGFIQNKNLERAQELFDKMPRRNVVTWTTMMNGYLQSIQSETALQLFNGMLIDGIRPNQV 320
Query: 289 MIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELG 348
+ + AC EG Q+H +I K F FI++T+++ YA CG I LAR F L
Sbjct: 321 TFLGAVDACSNLAGLSEGQQVHQMICKTPFQFDTFIESTLMNLYAKCGEIILARKVFNLS 380
Query: 349 IKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFH 408
+ + SWN +IA + +G+ +A L+ MQ+
Sbjct: 381 KEKDVISWNGMIAAYAHHGVGLEAIHLYEKMQEN-------------------------- 414
Query: 409 GMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEY-VLNNSITLNDNLSAAIIDMYAKC 467
G KPN++T V + A + SG + EG EY V + SI + D +ID+ ++
Sbjct: 415 -----GYKPNDVTYVGLLSACSHSGLVDEGLRIFEYMVKDRSIAVRDEHYTCLIDLCSRA 469
Query: 468 GSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIG 527
G + A + + ++ +S + WNA++ G HG+ ++ DL RN+ G
Sbjct: 470 GRLGDAKRLIHFLKVEPSS-TVWNALLGGCNSHGNESI-----GDLAARNLLEAEPNNAG 523
Query: 528 VLSTCCH 534
+ C+
Sbjct: 524 TYTLLCN 530
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 131/267 (49%), Gaps = 23/267 (8%)
Query: 333 AACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ-KRDVYSWSAMI 391
AA GR++ AR F+ + SW AL+A + GM+ DAR LF+ +R+V +W+A++
Sbjct: 46 AAAGRVSDARRLFDRTPDRDVVSWTALVAAYACQGMLHDARALFDRPDARRNVVTWTALL 105
Query: 392 SGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSIT 451
SGYA+ + + A LF M + V ++ ++ A SSG + + L N +
Sbjct: 106 SGYARAGRVDEAEALFGRMPERNV----VSWNTMLEAYTSSGRVGDA-----CTLFNGMP 156
Query: 452 LNDNLSAAI-IDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIY 510
+ D S I + + G+I+ A ++F + +R +V W ++ G+A G N ++
Sbjct: 157 VRDAGSWNILLAALVRSGNIDKARKLFDRMPER--NVMAWTTMVAGIARSGSVNEARALF 214
Query: 511 SDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGR 570
+ +RN+ +++ ++S ++D F M + D+ + M+ +
Sbjct: 215 DGMPERNV----VSWNAMISGYARNHMIDEAHDLFMKMPT-----RDIASWNIMITGFIQ 265
Query: 571 AGQLEDAEEVIRSMPMKADVVIWGTLL 597
LE A+E+ MP + +VV W T++
Sbjct: 266 NKNLERAQELFDKMPRR-NVVTWTTMM 291
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 107/233 (45%), Gaps = 37/233 (15%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
++ + A+ CS +S+GQQ+H +I K+ + +TFI+++L+NLYAKCG I A+ +F
Sbjct: 319 QVTFLGAVDACSNLAGLSEGQQVHQMICKTPFQFDTFIESTLMNLYAKCGEIILARKVF- 377
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
N ++E K +S+ MI +A + EA+ +
Sbjct: 378 -----------------------NLSKE-------KDVISWNGMIAAYAHHGVGLEAIHL 407
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWE-CRMLHGLVIKLMIDGFVIISTNLLNMYC 201
+ M+ G PN+VT ++S+ H G + E R+ +V I T L+++
Sbjct: 408 YEKMQENGYKPNDVTYVGLLSACSHSGLVDEGLRIFEYMVKDRSIAVRDEHYTCLIDLCS 467
Query: 202 VCSSLVEARSLFDEMK-ERNIVSWNVMLNGFAKAGLVEL----ARELFERIPS 249
L +A+ L +K E + WN +L G G + AR L E P+
Sbjct: 468 RAGRLGDAKRLIHFLKVEPSSTVWNALLGGCNSHGNESIGDLAARNLLEAEPN 520
>gi|449447569|ref|XP_004141540.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g71490-like [Cucumis sativus]
gi|449481506|ref|XP_004156203.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g71490-like [Cucumis sativus]
Length = 712
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 190/657 (28%), Positives = 319/657 (48%), Gaps = 78/657 (11%)
Query: 19 NSDYELALVSA---LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLIS 75
N ++L L S L C+ ++ G+Q+H I SGL ++F+ + L+ Y+ +
Sbjct: 72 NDSFDLILQSISILLVSCTKSSSLPPGKQLHGHIISSGLVEDSFLVSKLVMFYSSLEFLP 131
Query: 76 QAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDC 135
+A ++ ++ + P + NI+I+ Y+++ +L +A
Sbjct: 132 EAHTLVETSNLFRPCSWNILITSYVKH-KLYEA--------------------------- 163
Query: 136 WREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTN 195
A+ ++ M GV P+ T S++ + + +H + + +
Sbjct: 164 ---AILAYKQMVSKGVRPDNFTFPSILKACGETQNLKFGLEVHKSINSWSTPWSLFVHNA 220
Query: 196 LLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSK----D 251
L++MY C + AR+LFD M ER+ VSWN M++ ++ G+ A ELFE + SK +
Sbjct: 221 LISMYGRCGEVDTARNLFDNMLERDAVSWNSMISCYSSRGMWREAFELFESMQSKCLEIN 280
Query: 252 VVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHS 311
VV+W + G L+V ++AL + M GI +DV ++ + AC A G +IH
Sbjct: 281 VVTWNIIAGGCLRVGNFTQALKLLSQMRNFGIHLDDVAMIIGLGACSHIGAIRLGKEIHG 340
Query: 312 IIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIED 371
++ +Q ++ YA C I A + F L +WN++++G G +E+
Sbjct: 341 FTIRHYHHMLSTVQNALVTMYARCKDIRHAYMLFRLNDDKSRITWNSMLSGLTHLGRVEE 400
Query: 372 ARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIAS 431
AL LF ++ GV+P+ +T S+ A
Sbjct: 401 -------------------------------ALCLFRELLLFGVEPDYVTFASILPLCAR 429
Query: 432 SGTLKEGRWAHEYVLNNSITLNDNLSA--AIIDMYAKCGSINTAFEVFYHI--RDRTTSV 487
L+ GR H Y+ + D+L A++DMYA+ G ++ A +FY + +D T
Sbjct: 430 VADLQHGREFHCYITKHR-DFRDHLLLWNALVDMYARAGKVSEAKRIFYSLSKKDEVT-- 486
Query: 488 SPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKS 547
+ ++I G M G+ ++++ ++++ IK + IT I VLS C H+GLV+ E F
Sbjct: 487 --YTSLIAGYGMQGEGGKAVRLFEEMKRFQIKPDHITMIAVLSACSHSGLVNQAELLFAE 544
Query: 548 MKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVE 607
M+SV+ + P L+HY CM DL GR G L A+E+I MP + IW TL+ A IHGN++
Sbjct: 545 MQSVHGLSPRLEHYACMADLFGRVGLLNKAKEIITRMPYRPTSAIWATLIGACCIHGNMD 604
Query: 608 VGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
+GE AA+ L ++P H VL++N+YA AG W IR MRD G+ ++PG S V
Sbjct: 605 IGEWAAEKLLEMRPEHSGYYVLIANMYAAAGSWSKLAEIRTLMRDSGVAKIPGCSWV 661
>gi|356561794|ref|XP_003549163.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
mitochondrial-like [Glycine max]
Length = 615
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 179/643 (27%), Positives = 312/643 (48%), Gaps = 106/643 (16%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
L+ C+ ++ G +H + K G +++TF+Q +L+++Y+KC ++
Sbjct: 53 LKACANLPSIQHGTMLHGHVLKLGFQADTFVQTALVDMYSKCSHVA-------------- 98
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
AR+VFD+ P + VS+ +M+ +++ +AL + ++M +L
Sbjct: 99 -----------------SARQVFDEMPQRSVVSWNAMVSAYSRRSSMDQALSLLKEMWVL 141
Query: 150 GVIPNEVTLASVISS-------SVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
G P T S++S HL G + +H +IKL G V + +L N
Sbjct: 142 GFEPTASTFVSILSGYSNLDSFEFHLLG----KSIHCCLIKL---GIVYLEVSLAN---- 190
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
++ + + L++ AR++F+ + K ++SW TMI GY
Sbjct: 191 -----------------------SLMGMYVQFCLMDEARKVFDLMDEKSIISWTTMIGGY 227
Query: 263 LQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD 322
+++ EA ++ M + + V+ ++LIS C + +HS+++K G + D
Sbjct: 228 VKIGHAVEAYGLFYQMQHQSVGIDFVVFLNLISGCIQVRDLLLASSVHSLVLKCGCNEKD 287
Query: 323 FIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKR 382
++ +I YA CG + AR++F+ + ++
Sbjct: 288 PVENLLITMYAKCGNLT-------------------------------SARRIFDLIIEK 316
Query: 383 DVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAH 442
+ SW++MI+GY P AL+LF M+ ++PN T+ +V A A G+L G+
Sbjct: 317 SMLSWTSMIAGYVHLGHPGEALDLFRRMIRTDIRPNGATLATVVSACADLGSLSIGQEIE 376
Query: 443 EYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGD 502
EY+ N + + + ++I MY+KCGSI A EVF + D+ +V W ++I A+HG
Sbjct: 377 EYIFLNGLESDQQVQTSLIHMYSKCGSIVKAREVFERVTDKDLTV--WTSMINSYAIHGM 434
Query: 503 ANLTLKIYSDLEK-RNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHY 561
N + ++ + I ++I + V C H+GLV+ G +YFKSM+ + + P ++H
Sbjct: 435 GNEAISLFHKMTTAEGIMPDAIVYTSVFLACSHSGLVEEGLKYFKSMQKDFGITPTVEHC 494
Query: 562 GCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQP 621
C++DLLGR GQL+ A I+ MP +WG LL+A RIHGNVE+GE A L P
Sbjct: 495 TCLIDLLGRVGQLDLALNAIQGMPPDVQAQVWGPLLSACRIHGNVELGELATVRLLDSSP 554
Query: 622 SHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
S VL++N+Y G+W++A +R M G+ + G+S V
Sbjct: 555 GSSGSYVLMANLYTSLGKWKEAHMMRNSMDGKGLVKESGWSQV 597
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 119/541 (21%), Positives = 232/541 (42%), Gaps = 73/541 (13%)
Query: 122 SYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLV 181
++ MI N + + L ++ M GV N +T ++ + +L I MLHG V
Sbjct: 13 TWNLMIRDSTNNGFFTQTLNIYSSMAHSGVHGNNLTYPLLLKACANLPSIQHGTMLHGHV 72
Query: 182 IKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELAR 241
+KL + T L++MY CS + AR +FDEM +R++VSWN M++ +++
Sbjct: 73 LKLGFQADTFVQTALVDMYSKCSHVASARQVFDEMPQRSVVSWNAMVSAYSRR------- 125
Query: 242 ELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAM 301
+ +AL++ + M G P V ++S
Sbjct: 126 ------------------------SSMDQALSLLKEMWVLGFEPTASTFVSILSG----- 156
Query: 302 AFGEGLQIHSIIVKAGFDCYDF-IQATIIHFYAACGRINLARLQFELGIKDHIASWNALI 360
+ D ++F + IH C I L + E+ + N+L+
Sbjct: 157 -------------YSNLDSFEFHLLGKSIH----CCLIKLGIVYLEVSLA------NSLM 193
Query: 361 AGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEI 420
+++ ++++AR++F+ M ++ + SW+ MI GY + A LF+ M V + +
Sbjct: 194 GMYVQFCLMDEARKVFDLMDEKSIISWTTMIGGYVKIGHAVEAYGLFYQMQHQSVGIDFV 253
Query: 421 TMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHI 480
+++ L H VL D + +I MYAKCG++ +A +F I
Sbjct: 254 VFLNLISGCIQVRDLLLASSVHSLVLKCGCNEKDPVENLLITMYAKCGNLTSARRIFDLI 313
Query: 481 RDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDL 540
++ S+ W ++I G G L ++ + + +I+ N T V+S C G + +
Sbjct: 314 IEK--SMLSWTSMIAGYVHLGHPGEALDLFRRMIRTDIRPNGATLATVVSACADLGSLSI 371
Query: 541 GERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAAS 600
G+ + + +E D + ++ + + G + A EV + K D+ +W +++ +
Sbjct: 372 GQE-IEEYIFLNGLESDQQVQTSLIHMYSKCGSIVKAREVFERVTDK-DLTVWTSMINSY 429
Query: 601 RIHGNVEVGERAAKSLAGLQPSHG--PSRVLLSNIY---ADAGRWEDAFSIRKEM-RDCG 654
IHG +G A + + G P ++ ++++ + +G E+ K M +D G
Sbjct: 430 AIHG---MGNEAISLFHKMTTAEGIMPDAIVYTSVFLACSHSGLVEEGLKYFKSMQKDFG 486
Query: 655 M 655
+
Sbjct: 487 I 487
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/287 (19%), Positives = 124/287 (43%), Gaps = 37/287 (12%)
Query: 250 KDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQI 309
+ + +W MI ++ L +Y +M G+ N++ L+ AC + G +
Sbjct: 9 RSLYTWNLMIRDSTNNGFFTQTLNIYSSMAHSGVHGNNLTYPLLLKACANLPSIQHGTML 68
Query: 310 HSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMI 369
H ++K GF F+Q ++ Y+ C + AR F+ + + SWNA+++ + R +
Sbjct: 69 HGHVLKLGFQADTFVQTALVDMYSKCSHVASARQVFDEMPQRSVVSWNAMVSAYSRRSSM 128
Query: 370 EDARQLFNNMQ----KRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSV 425
+ A L M + ++ +++SGY+ N+ FH + S+
Sbjct: 129 DQALSLLKEMWVLGFEPTASTFVSILSGYS-----NLDSFEFH-----------LLGKSI 172
Query: 426 FCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTT 485
C + G + L +L+ +++ MY + ++ A +VF + ++
Sbjct: 173 HCCLIKLGI---------------VYLEVSLANSLMGMYVQFCLMDEARKVFDLMDEK-- 215
Query: 486 SVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTC 532
S+ W +I G G A ++ ++ +++ ++ + F+ ++S C
Sbjct: 216 SIISWTTMIGGYVKIGHAVEAYGLFYQMQHQSVGIDFVVFLNLISGC 262
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 72/150 (48%), Gaps = 2/150 (1%)
Query: 381 KRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRW 440
+R +Y+W+ MI N L ++ M +GV N +T + A A+ +++ G
Sbjct: 8 RRSLYTWNLMIRDSTNNGFFTQTLNIYSSMAHSGVHGNNLTYPLLLKACANLPSIQHGTM 67
Query: 441 AHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMH 500
H +VL + + A++DMY+KC + +A +VF + R SV WNA++ +
Sbjct: 68 LHGHVLKLGFQADTFVQTALVDMYSKCSHVASARQVFDEMPQR--SVVSWNAMVSAYSRR 125
Query: 501 GDANLTLKIYSDLEKRNIKLNSITFIGVLS 530
+ L + ++ + + TF+ +LS
Sbjct: 126 SSMDQALSLLKEMWVLGFEPTASTFVSILS 155
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 71/136 (52%), Gaps = 6/136 (4%)
Query: 25 ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSC 84
L + + C+ ++S GQ+I IF +GLES+ +Q SLI++Y+KCG I +A+ +F+
Sbjct: 355 TLATVVSACADLGSLSIGQEIEEYIFLNGLESDQQVQTSLIHMYSKCGSIVKAREVFERV 414
Query: 85 STLDPVACNIMISGYIRNDRLNDAREVFDKTP-----IKCCVSYTSMIMGFAQNDCWREA 139
+ D MI+ Y + N+A +F K + + YTS+ + + + E
Sbjct: 415 TDKDLTVWTSMINSYAIHGMGNEAISLFHKMTTAEGIMPDAIVYTSVFLACSHSGLVEEG 474
Query: 140 LEVFRDM-RILGVIPN 154
L+ F+ M + G+ P
Sbjct: 475 LKYFKSMQKDFGITPT 490
>gi|356502293|ref|XP_003519954.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 1047
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 191/640 (29%), Positives = 307/640 (47%), Gaps = 97/640 (15%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+ + S L CS+ A+ G+Q HS K+G+ S+ ++ +L++LY KC I A F S
Sbjct: 373 VTVASLLSACSSVGALLVGKQFHSYAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFFLS 432
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
T + V N+M+ Y D LN E+ ++F
Sbjct: 433 TETENVVLWNVMLVAYGLLDNLN-------------------------------ESFKIF 461
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
M++ G+ PN+ T S++ + L + +H V+K V +S+ L++MY
Sbjct: 462 TQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKL 521
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYL 263
L A +F +KE+++VSW M I GY
Sbjct: 522 GKLDHALKIFRRLKEKDVVSWTAM-------------------------------IAGYA 550
Query: 264 QVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDF 323
Q E+ +EAL +++ M GI +++ ISAC A +G QIH+ +G+
Sbjct: 551 QHEKFAEALNLFKEMQDQGIHSDNIGFASAISACAGIQALNQGQQIHAQACVSGYSDDLS 610
Query: 324 IQATIIHFYAACGRINLARLQFE-LGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKR 382
+ ++ YA CG++ A F+ + KD+I SWN+LI+GF ++G E+A LF+ M K
Sbjct: 611 VGNALVSLYARCGKVRDAYFAFDKIFSKDNI-SWNSLISGFAQSGHCEEALSLFSQMSK- 668
Query: 383 DVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAH 442
AG + N T A A+ +K G+ H
Sbjct: 669 ------------------------------AGQEINSFTFGPAVSAAANVANVKLGKQIH 698
Query: 443 EYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGD 502
++ +S +I +YAKCG+I+ A F+ + ++ WNA++ G + HG
Sbjct: 699 AMIIKTGHDSETEVSNVLITLYAKCGNIDDAERQFFEMPEKNE--ISWNAMLTGYSQHGH 756
Query: 503 ANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYG 562
L ++ D+++ + N +TF+GVLS C H GLVD G +YF+SM+ V+ + P +HY
Sbjct: 757 GFKALSLFEDMKQLGVLPNHVTFVGVLSACSHVGLVDEGIKYFQSMREVHGLVPKPEHYA 816
Query: 563 CMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPS 622
C+VDLLGR+G L A + MP++ D ++ TLL+A +H N+++GE AA L L+P
Sbjct: 817 CVVDLLGRSGLLSRARRFVEEMPIQPDAMVCRTLLSACIVHKNIDIGEFAASHLLELEPK 876
Query: 623 HGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
+ VLLSN+YA G+W R+ M+D G+K+ PG S
Sbjct: 877 DSATYVLLSNMYAVTGKWGCRDRTRQMMKDRGVKKEPGRS 916
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 132/515 (25%), Positives = 232/515 (45%), Gaps = 67/515 (13%)
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
V C ++ YI L+ A VFD+ P++ + ++ F L +FR M
Sbjct: 104 VLCERLMDLYIAFGDLDGAVTVFDEMPVRPLSCWNKVLHRFVAGKMAGRVLGLFRRMLQE 163
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
V P+E T A V+ GG G V C + A
Sbjct: 164 KVKPDERTYAGVLRGC---GG-----------------GDVPFH---------CVEKIHA 194
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLS 269
R++ E ++ N +++ + K G + A+++F+ + +D VSW M+ G Q
Sbjct: 195 RTI-THGYENSLFVCNPLIDLYFKNGFLNSAKKVFDGLQKRDSVSWVAMLSGLSQSGCEE 253
Query: 270 EALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATII 329
EA+ ++ M G+ P + ++SAC + + G Q+H +++K GF ++
Sbjct: 254 EAVLLFCQMHTSGVYPTPYIFSSVLSACTKVEFYKVGEQLHGLVLKQGFSLETYV----- 308
Query: 330 HFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSA 389
C NAL+ + R G A Q+FN M +RD S+++
Sbjct: 309 -----C---------------------NALVTLYSRLGNFIPAEQVFNAMLQRDEVSYNS 342
Query: 390 MISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNS 449
+ISG +Q + ALELF M +KP+ +T+ S+ A +S G L G+ H Y +
Sbjct: 343 LISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSACSSVGALLVGKQFHSYAIKAG 402
Query: 450 ITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKI 509
++ + L A++D+Y KC I TA E F + T +V WN ++ + + N + KI
Sbjct: 403 MSSDIILEGALLDLYVKCSDIKTAHEFF--LSTETENVVLWNVMLVAYGLLDNLNESFKI 460
Query: 510 YSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGER-YFKSMKSVYNVEPDLKHYGCMVDLL 568
++ ++ I+ N T+ +L TC VDLGE+ + + +K+ + + ++D+
Sbjct: 461 FTQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQIHTQVLKTGFQFNVYVS--SVLIDMY 518
Query: 569 GRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIH 603
+ G+L+ A ++ R + K DVV W ++A H
Sbjct: 519 AKLGKLDHALKIFRRLKEK-DVVSWTAMIAGYAQH 552
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 111/503 (22%), Positives = 207/503 (41%), Gaps = 69/503 (13%)
Query: 124 TSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIK 183
T++ ++ ++ + M GV N T ++ + G + LHG ++K
Sbjct: 37 TALSYAYSNDEGEANGINFLHLMEERGVRANSQTYLWLLDGCLSSGWFSDGWKLHGKILK 96
Query: 184 LMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELAREL 243
+ V++ L+++Y L A ++FDEM R + WN +L+ F +
Sbjct: 97 MGFCAEVVLCERLMDLYIAFGDLDGAVTVFDEMPVRPLSCWNKVLHRFVAGKMA------ 150
Query: 244 FERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAF 303
L ++R ML + + P++ ++ CG
Sbjct: 151 -------------------------GRVLGLFRRMLQEKVKPDERTYAGVLRGCGGG--- 182
Query: 304 GEGLQIHSIIVKAGFDCYDFIQA-TIIHFYAACGRINLARLQFELGIKDHIASWNALIAG 362
F C + I A TI H G ++ + N LI
Sbjct: 183 -----------DVPFHCVEKIHARTITH-----------------GYENSLFVCNPLIDL 214
Query: 363 FIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITM 422
+ +NG + A+++F+ +QKRD SW AM+SG +Q+ A+ LF M +GV P
Sbjct: 215 YFKNGFLNSAKKVFDGLQKRDSVSWVAMLSGLSQSGCEEEAVLLFCQMHTSGVYPTPYIF 274
Query: 423 VSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRD 482
SV A K G H VL +L + A++ +Y++ G+ A +VF +
Sbjct: 275 SSVLSACTKVEFYKVGEQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIPAEQVFNAMLQ 334
Query: 483 RTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGE 542
R +N++I GL+ G ++ L+++ + +K + +T +LS C G + +G+
Sbjct: 335 RDE--VSYNSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSACSSVGALLVGK 392
Query: 543 RYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRI 602
+ F S + D+ G ++DL + ++ A E S + +VV+W +L A +
Sbjct: 393 Q-FHSYAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFFLSTETE-NVVLWNVMLVAYGL 450
Query: 603 HGNVEVGER--AAKSLAGLQPSH 623
N+ + + G++P+
Sbjct: 451 LDNLNESFKIFTQMQMEGIEPNQ 473
>gi|347954510|gb|AEP33755.1| chloroplast biogenesis 19, partial [Olimarabidopsis pumila]
Length = 475
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 157/420 (37%), Positives = 246/420 (58%), Gaps = 6/420 (1%)
Query: 249 SKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQ 308
S+ +VSW + I + L+EA + M G+ P + + L+S CG + E L
Sbjct: 8 SETIVSWTSRITLLTRSAXLAEAAKEFADMRLAGVEPTHITFIALLSGCGDFPSGSETLG 67
Query: 309 --IHSIIVKAGFD-CYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIR 365
+H K G D + + I+ Y+ GR+ ARL F+ + +WN +I G++R
Sbjct: 68 DLLHGYACKLGLDRNHVMVGTAILGMYSKRGRVKKARLVFDYMDDKNSVTWNTMIDGYMR 127
Query: 366 NGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSV 425
+G + +A +LF+ M + D+ SW+AM++G+ + AL F M +GVKP+ + +++
Sbjct: 128 SGQVHNAVKLFDKMPEPDLISWTAMVNGFVKKGFHEEALVWFREMQISGVKPDYVAIIAA 187
Query: 426 FCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTT 485
A + G L G W H YV++ N +S ++ID+Y +CG + A EVF + RT
Sbjct: 188 LNACTNLGALSLGLWVHRYVMSQDFKNNVRVSNSLIDLYCRCGCVEFAREVFDKMEKRT- 246
Query: 486 SVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYF 545
V WN++I G A +G+A+ +L + +++ K N++TF G L+ C H GLVD G R+F
Sbjct: 247 -VVSWNSVIVGFAANGNAHESLVYFRKMQEEGFKPNAVTFTGALTACSHVGLVDEGLRFF 305
Query: 546 KSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGN 605
+SMK YN+ P ++HYGC+VDL RAG+LEDA +V++SMPMK + V+ G+LLAA R HGN
Sbjct: 306 QSMKRDYNISPRIEHYGCLVDLYSRAGRLEDALKVVQSMPMKPNEVVIGSLLAACRNHGN 365
Query: 606 VEV-GERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
V ER K L+ L + V+LSN+YA +WE A +R++M+ G+K+ PGFS +
Sbjct: 366 NTVLAERLMKHLSDLNVKSHSNYVILSNMYAADAKWEGASRMRRKMKGLGLKKQPGFSSI 425
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 101/368 (27%), Positives = 175/368 (47%), Gaps = 35/368 (9%)
Query: 113 DKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIW 172
+++ + VS+TS I ++ EA + F DMR+ GV P +T +++S
Sbjct: 4 NQSTSETIVSWTSRITLLTRSAXLAEAAKEFADMRLAGVEPTHITFIALLSGCGDFPSGS 63
Query: 173 EC--RMLHGLVIKLMID-GFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLN 229
E +LHG KL +D V++ T +L MY + +AR +FD M ++N V+WN M++
Sbjct: 64 ETLGDLLHGYACKLGLDRNHVMVGTAILGMYSKRGRVKKARLVFDYMDDKNSVTWNTMID 123
Query: 230 GFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVM 289
G+ ++G V A +LF+++P D++SW M++G+++ EAL +R M G+ P+ V
Sbjct: 124 GYMRSGQVHNAVKLFDKMPEPDLISWTAMVNGFVKKGFHEEALVWFREMQISGVKPDYVA 183
Query: 290 IVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGI 349
I+ ++AC A GL +H ++ F + ++I Y CG + AR F+
Sbjct: 184 IIAALNACTNLGALSLGLWVHRYVMSQDFKNNVRVSNSLIDLYCRCGCVEFAREVFDKME 243
Query: 350 KDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHG 409
K + SWN++I GF NG ++ F MQ
Sbjct: 244 KRTVVSWNSVIVGFAANGNAHESLVYFRKMQ----------------------------- 274
Query: 410 MVDAGVKPNEITMVSVFCAIASSGTLKEG-RWAHEYVLNNSITLNDNLSAAIIDMYAKCG 468
+ G KPN +T A + G + EG R+ + +I+ ++D+Y++ G
Sbjct: 275 --EEGFKPNAVTFTGALTACSHVGLVDEGLRFFQSMKRDYNISPRIEHYGCLVDLYSRAG 332
Query: 469 SINTAFEV 476
+ A +V
Sbjct: 333 RLEDALKV 340
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 155/313 (49%), Gaps = 47/313 (15%)
Query: 42 GQQIHSLIFKSGLESN-TFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYI 100
G +H K GL+ N + +++ +Y+K G + +A+ +FD + V N MI GY+
Sbjct: 67 GDLLHGYACKLGLDRNHVMVGTAILGMYSKRGRVKKARLVFDYMDDKNSVTWNTMIDGYM 126
Query: 101 RNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLAS 160
R+ ++++A ++FDK P +S+T+M+ GF + EAL FR+M+I GV P+ V + +
Sbjct: 127 RSGQVHNAVKLFDKMPEPDLISWTAMVNGFVKKGFHEEALVWFREMQISGVKPDYVAIIA 186
Query: 161 VISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERN 220
+++ +LG + +H V+ V +S +L+++YC C + AR +FD+M++R
Sbjct: 187 ALNACTNLGALSLGLWVHRYVMSQDFKNNVRVSNSLIDLYCRCGCVEFAREVFDKMEKRT 246
Query: 221 IVSWNVMLNGFA-----------------------------------KAGLVELARELFE 245
+VSWN ++ GFA GLV+ F+
Sbjct: 247 VVSWNSVIVGFAANGNAHESLVYFRKMQEEGFKPNAVTFTGALTACSHVGLVDEGLRFFQ 306
Query: 246 RIP-----SKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISAC--- 297
+ S + +G ++D Y + RL +AL + ++M + PN+V+I L++AC
Sbjct: 307 SMKRDYNISPRIEHYGCLVDLYSRAGRLEDALKVVQSM---PMKPNEVVIGSLLAACRNH 363
Query: 298 GRAMAFGEGLQIH 310
G E L H
Sbjct: 364 GNNTVLAERLMKH 376
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 104/267 (38%), Gaps = 40/267 (14%)
Query: 374 QLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVF--CAIAS 431
Q N + SW++ I+ ++ A + F M AGV+P IT +++ C
Sbjct: 1 QKHNQSTSETIVSWTSRITLLTRSAXLAEAAKEFADMRLAGVEPTHITFIALLSGCGDFP 60
Query: 432 SGTLKEGRWAHEYVLNNSITLNDNL-SAAIIDMYAKCGSINTAFEVFYHIRDRTT----- 485
SG+ G H Y + N + AI+ MY+K G + A VF ++ D+ +
Sbjct: 61 SGSETLGDLLHGYACKLGLDRNHVMVGTAILGMYSKRGRVKKARLVFDYMDDKNSVTWNT 120
Query: 486 ------------------------SVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLN 521
+ W A++ G G L + +++ +K +
Sbjct: 121 MIDGYMRSGQVHNAVKLFDKMPEPDLISWTAMVNGFVKKGFHEEALVWFREMQISGVKPD 180
Query: 522 SITFIGVLSTCCHAGLVDLG---ERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAE 578
+ I L+ C + G + LG RY S NV ++DL R G +E A
Sbjct: 181 YVAIIAALNACTNLGALSLGLWVHRYVMSQDFKNNVRVS----NSLIDLYCRCGCVEFAR 236
Query: 579 EVIRSMPMKADVVIWGTLLAASRIHGN 605
EV M K VV W +++ +GN
Sbjct: 237 EVFDKME-KRTVVSWNSVIVGFAANGN 262
>gi|297800176|ref|XP_002867972.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313808|gb|EFH44231.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 535
Score = 299 bits (766), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 164/459 (35%), Positives = 252/459 (54%), Gaps = 36/459 (7%)
Query: 237 VELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISA 296
V A + RI S + + ++I Y ALT++R ML + P+ ++ A
Sbjct: 60 VSYAHSILNRIESPNGFTHNSVIRAYANSSTPEIALTVFREMLLGPVFPDKYSFTFVLKA 119
Query: 297 CGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFE-LGIKDHIAS 355
C F EG QIH + +K+ F++ T+I+ Y G +AR + + ++D + S
Sbjct: 120 CAAFCGFEEGRQIHGLFMKSDLVTDVFVENTLINVYGRSGYFEIARKVLDRMPVRDAV-S 178
Query: 356 WNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQ-----------NEQP---- 400
WN+L++ ++ G++E+AR LF+ M++R+V SW+ MISGYA + P
Sbjct: 179 WNSLLSAYLDKGLVEEARALFDEMEERNVESWNFMISGYAAAGLVKEAREVFDSMPVKDV 238
Query: 401 ----------------NMALELFHGMVD-AGVKPNEITMVSVFCAIASSGTLKEGRWAHE 443
N LE+F+ M+D + +P+ T+V+V A AS G+L +G W H
Sbjct: 239 VSWNAMVTAYAHVGCYNEVLEVFNMMLDDSAERPDGFTLVNVLSACASLGSLSQGEWVHV 298
Query: 444 YVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDA 503
Y+ + I + ++ A++DMY+KCG I+ A EVF R VS WN+II GL++HG
Sbjct: 299 YIDKHGIEIEGFVATALVDMYSKCGKIDKALEVFRDTSKR--DVSTWNSIITGLSVHGLG 356
Query: 504 NLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGC 563
L+I+S++ K N ITFIGVLS C H GL+D + F+ M SVY +EP ++HYGC
Sbjct: 357 KDALEIFSEMVYEGFKPNGITFIGVLSACNHVGLLDQARKLFEMMNSVYGIEPTIEHYGC 416
Query: 564 MVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSH 623
MVDLLGR G+ E+AEE++ +P ++ +LL A + G +E ER A L P
Sbjct: 417 MVDLLGRMGKFEEAEELVNEVPADEASILLESLLGACKRFGKLEQAERIANRLLESNPRE 476
Query: 624 GPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
V +SN+YA GRW++A +R +MR +K+ PG S
Sbjct: 477 SSGYVQMSNLYASHGRWDEAMEVRGKMRAERVKKNPGCS 515
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 114/479 (23%), Positives = 194/479 (40%), Gaps = 94/479 (19%)
Query: 43 QQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRN 102
QQ H+ + K+GL +TF + L+ A + +P +
Sbjct: 26 QQAHAFMLKTGLFHDTFSASKLVAFAA---------------TNPEPKTVSY-------- 62
Query: 103 DRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVI 162
A + ++ ++ S+I +A + AL VFR+M + V P++ + V+
Sbjct: 63 -----AHSILNRIESPNGFTHNSVIRAYANSSTPEIALTVFREMLLGPVFPDKYSFTFVL 117
Query: 163 SSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIV 222
+ G E R +HGL +K + V + L+N+Y AR + D M R+ V
Sbjct: 118 KACAAFCGFEEGRQIHGLFMKSDLVTDVFVENTLINVYGRSGYFEIARKVLDRMPVRDAV 177
Query: 223 SWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEA----------- 271
SWN +L+ + GLVE AR LF+ + ++V SW MI GY + EA
Sbjct: 178 SWNSLLSAYLDKGLVEEARALFDEMEERNVESWNFMISGYAAAGLVKEAREVFDSMPVKD 237
Query: 272 --------------------LTMYRAMLCDGIA-PNDVMIVDLISACGRAMAFGEGLQIH 310
L ++ ML D P+ +V+++SAC + +G +H
Sbjct: 238 VVSWNAMVTAYAHVGCYNEVLEVFNMMLDDSAERPDGFTLVNVLSACASLGSLSQGEWVH 297
Query: 311 SIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIE 370
I K G + F+ ++ Y+ CG+I+ A F K +++WN++I G +G+ +
Sbjct: 298 VYIDKHGIEIEGFVATALVDMYSKCGKIDKALEVFRDTSKRDVSTWNSIITGLSVHGLGK 357
Query: 371 DARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIA 430
D ALE+F MV G KPN IT + V A
Sbjct: 358 D-------------------------------ALEIFSEMVYEGFKPNGITFIGVLSACN 386
Query: 431 SSGTLKEGRWAHEYVLNNSITLNDNLS--AAIIDMYAKCGSINTAFEVFYHIRDRTTSV 487
G L + R E ++N+ + + ++D+ + G A E+ + S+
Sbjct: 387 HVGLLDQARKLFE-MMNSVYGIEPTIEHYGCMVDLLGRMGKFEEAEELVNEVPADEASI 444
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 108/433 (24%), Positives = 191/433 (44%), Gaps = 82/433 (18%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKC------------------ 71
L+ C+A +G+QIH L KS L ++ F++N+LIN+Y +
Sbjct: 117 LKACAAFCGFEEGRQIHGLFMKSDLVTDVFVENTLINVYGRSGYFEIARKVLDRMPVRDA 176
Query: 72 -------------GLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIK 118
GL+ +A+++FD + + N MISGY + +AREVFD P+K
Sbjct: 177 VSWNSLLSAYLDKGLVEEARALFDEMEERNVESWNFMISGYAAAGLVKEAREVFDSMPVK 236
Query: 119 CCVSYTSMIMGFAQNDCWREALEVFRDM-RILGVIPNEVTLASVISSSVHLGGIWECRML 177
VS+ +M+ +A C+ E LEVF M P+ TL +V+S+ LG + + +
Sbjct: 237 DVVSWNAMVTAYAHVGCYNEVLEVFNMMLDDSAERPDGFTLVNVLSACASLGSLSQGEWV 296
Query: 178 HGLVIK--LMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAG 235
H + K + I+GFV +T L++MY C + +A +F + +R++ +WN ++ G + G
Sbjct: 297 HVYIDKHGIEIEGFV--ATALVDMYSKCGKIDKALEVFRDTSKRDVSTWNSIITGLSVHG 354
Query: 236 LVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLIS 295
L KD AL ++ M+ +G PN + + ++S
Sbjct: 355 L------------GKD-------------------ALEIFSEMVYEGFKPNGITFIGVLS 383
Query: 296 ACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHF------YAACGRINLA-RLQFELG 348
AC + ++ ++ + I+ TI H+ G+ A L E+
Sbjct: 384 ACNHVGLLDQARKLFEMM-----NSVYGIEPTIEHYGCMVDLLGRMGKFEEAEELVNEVP 438
Query: 349 IKDHIASWNALIAGFIRNGMIEDARQLFNNM---QKRDVYSWSAMISGYAQNEQPNMALE 405
+ +L+ R G +E A ++ N + R+ + M + YA + + + A+E
Sbjct: 439 ADEASILLESLLGACKRFGKLEQAERIANRLLESNPRESSGYVQMSNLYASHGRWDEAME 498
Query: 406 LFHGMVDAGVKPN 418
+ M VK N
Sbjct: 499 VRGKMRAERVKKN 511
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 127/296 (42%), Gaps = 44/296 (14%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
LV+ L C++ ++SQG+ +H I K G+E F+ +L+++Y+KCG I +A
Sbjct: 275 FTLVNVLSACASLGSLSQGEWVHVYIDKHGIEIEGFVATALVDMYSKCGKIDKA------ 328
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
EVF T + ++ S+I G + + ++ALE+F
Sbjct: 329 -------------------------LEVFRDTSKRDVSTWNSIITGLSVHGLGKDALEIF 363
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLM-IDGFVIISTNLLNMYCV 202
+M G PN +T V+S+ H+G + + R L ++ + I+ + ++++
Sbjct: 364 SEMVYEGFKPNGITFIGVLSACNHVGLLDQARKLFEMMNSVYGIEPTIEHYGCMVDLLGR 423
Query: 203 CSSLVEARSLFDEMK-ERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDG 261
EA L +E+ + + +L + G +E A ERI ++ + S G
Sbjct: 424 MGKFEEAEELVNEVPADEASILLESLLGACKRFGKLEQA----ERIANRLLESNPRESSG 479
Query: 262 YLQVE-------RLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIH 310
Y+Q+ R EA+ + M + + N + + GEGL+I
Sbjct: 480 YVQMSNLYASHGRWDEAMEVRGKMRAERVKKNPGCSMIEVDGVVHEFLAGEGLRIE 535
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/307 (20%), Positives = 117/307 (38%), Gaps = 48/307 (15%)
Query: 280 CDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRIN 339
C P V ++S RA + E Q H+ ++K G F + ++ F A
Sbjct: 4 CSSTTP-----VPILSFTERAKSLLEIQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPK 58
Query: 340 LARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQ 399
+ A + N ++ + ++ +++I YA +
Sbjct: 59 ----------------------------TVSYAHSILNRIESPNGFTHNSVIRAYANSST 90
Query: 400 PNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAA 459
P +AL +F M+ V P++ + V A A+ +EGR H + + + + +
Sbjct: 91 PEIALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFMKSDLVTDVFVENT 150
Query: 460 IIDMYAKCGSINTAFEVFYHIRDR--TTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRN 517
+I++Y + G FE+ + DR WN+++ G ++ ++E+RN
Sbjct: 151 LINVYGRSGY----FEIARKVLDRMPVRDAVSWNSLLSAYLDKGLVEEARALFDEMEERN 206
Query: 518 IKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDA 577
++ S F+ +S AGLV F SM D+ + MV G +
Sbjct: 207 VE--SWNFM--ISGYAAAGLVKEAREVFDSMPV-----KDVVSWNAMVTAYAHVGCYNEV 257
Query: 578 EEVIRSM 584
EV M
Sbjct: 258 LEVFNMM 264
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 86/190 (45%), Gaps = 7/190 (3%)
Query: 421 TMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHI 480
T V + + +L E + AH ++L + +D SA+ + +A + I
Sbjct: 8 TPVPILSFTERAKSLLEIQQAHAFMLKTGL-FHDTFSASKLVAFAATNPEPKTVSYAHSI 66
Query: 481 RDRTTSVSPW--NAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCC-HAGL 537
+R S + + N++I A + L ++ ++ + + +F VL C G
Sbjct: 67 LNRIESPNGFTHNSVIRAYANSSTPEIALTVFREMLLGPVFPDKYSFTFVLKACAAFCGF 126
Query: 538 VDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLL 597
+ + + MKS ++ D+ ++++ GR+G E A +V+ MP++ D V W +LL
Sbjct: 127 EEGRQIHGLFMKS--DLVTDVFVENTLINVYGRSGYFEIARKVLDRMPVR-DAVSWNSLL 183
Query: 598 AASRIHGNVE 607
+A G VE
Sbjct: 184 SAYLDKGLVE 193
>gi|225425668|ref|XP_002269694.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
[Vitis vinifera]
gi|296086362|emb|CBI31951.3| unnamed protein product [Vitis vinifera]
Length = 595
Score = 299 bits (766), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 167/479 (34%), Positives = 259/479 (54%), Gaps = 40/479 (8%)
Query: 193 STNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGF-------AKAGLVELARELFE 245
+T+ L++ C+SL E + L + ++ S +L F ++ A LF+
Sbjct: 20 TTHPLSLLPKCTSLRELKQLQAFAIKTHLHSDLSVLTKFINFCSLNPTTTSMQHAHHLFD 79
Query: 246 RIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGE 305
+IP D+V + TM GY + + A T++ +L G+ P+D L+ AC A E
Sbjct: 80 QIPQPDIVLFNTMARGYARTDTPLRAFTLFTQILFSGLFPDDYTFPSLLKACASCKALEE 139
Query: 306 GLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIR 365
G Q+H + +K G ++ T+I+ Y AC ++ AR
Sbjct: 140 GRQLHCLAIKLGLSENVYVCPTLINMYTACNEMDCAR----------------------- 176
Query: 366 NGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSV 425
++F+ + + V +++AMI+GYA+ +PN AL LF + +KP ++TM+SV
Sbjct: 177 --------RVFDKIWEPCVVTYNAMITGYARGSRPNEALSLFRELQARNLKPTDVTMLSV 228
Query: 426 FCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTT 485
+ A G L G+W HEYV N + A+IDMYAKCGS++ A VF ++ R T
Sbjct: 229 LSSCALLGALDLGKWMHEYVKKNGFNRFVKVDTALIDMYAKCGSLDDAVCVFENMAVRDT 288
Query: 486 SVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYF 545
W+A+I A+HG + ++ ++ K + + ITF+G+L C H GLV+ G YF
Sbjct: 289 QA--WSAMIMAYAIHGHGLKAVSLFKEMRKAGTEPDEITFLGLLYACSHTGLVEEGFEYF 346
Query: 546 KSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGN 605
M+ Y V P +KHYGCMVDLLGRAG+LE+A E I +P++ ++W TLL+A HGN
Sbjct: 347 YGMRDKYGVIPGIKHYGCMVDLLGRAGRLEEAYEFIVGLPIRPTPILWRTLLSACGSHGN 406
Query: 606 VEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
VE+G+R + + L SHG ++LSN+ A AGRWED +RK M + G+ ++PG S V
Sbjct: 407 VELGKRVIEQIFELDDSHGGDYIILSNLCARAGRWEDVNYVRKLMNERGVVKIPGCSSV 465
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 144/338 (42%), Gaps = 76/338 (22%)
Query: 1 TPLDHFHSVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFI 60
TPL F + L DY S L+ C++ A+ +G+Q+H L K GL N ++
Sbjct: 101 TPLRAFTLFTQILFSGLFPDDYTFP--SLLKACASCKALEEGRQLHCLAIKLGLSENVYV 158
Query: 61 QNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCC 120
+LIN+Y C + ++ AR VFDK C
Sbjct: 159 CPTLINMYTAC-------------------------------NEMDCARRVFDKIWEPCV 187
Query: 121 VSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGL 180
V+Y +MI G+A+ EAL +FR+++ + P +VT+ SV+SS LG + + +H
Sbjct: 188 VTYNAMITGYARGSRPNEALSLFRELQARNLKPTDVTMLSVLSSCALLGALDLGKWMHEY 247
Query: 181 VIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFA-------- 232
V K + FV + T L++MY C SL +A +F+ M R+ +W+ M+ +A
Sbjct: 248 VKKNGFNRFVKVDTALIDMYAKCGSLDDAVCVFENMAVRDTQAWSAMIMAYAIHGHGLKA 307
Query: 233 ---------------------------KAGLVELARELFERIPSK-----DVVSWGTMID 260
GLVE E F + K + +G M+D
Sbjct: 308 VSLFKEMRKAGTEPDEITFLGLLYACSHTGLVEEGFEYFYGMRDKYGVIPGIKHYGCMVD 367
Query: 261 GYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACG 298
+ RL EA Y ++ I P ++ L+SACG
Sbjct: 368 LLGRAGRLEEA---YEFIVGLPIRPTPILWRTLLSACG 402
>gi|357129337|ref|XP_003566320.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Brachypodium distachyon]
Length = 661
Score = 299 bits (766), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 175/498 (35%), Positives = 271/498 (54%), Gaps = 14/498 (2%)
Query: 175 RMLHG--LVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFA 232
R LH +V L D FV +++LL+ Y + ARS+FD M E+N+V W+ ++ G++
Sbjct: 37 RALHAAAVVSGLAEDPFV--ASSLLHSYIRLGATGAARSVFDRMPEKNVVGWSALIAGYS 94
Query: 233 KAGLVELARELFERIPS----KDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDV 288
G E A L E++ S +V++W ++ G + R +A+T M +G P+
Sbjct: 95 ARGDAEAAWGLLEQMRSAGVEPNVITWNGLVSGLNRSGRALDAVTALVRMHSEGFFPDAT 154
Query: 289 MIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELG 348
+ +SA G G Q+H +VKAG + +I Y CGR + F
Sbjct: 155 GVSCALSAVGDVKEVSVGKQVHGYVVKAGCRLDACVVTALIDMYGKCGRADEIVRVFHES 214
Query: 349 IKDHIASWNALIAGFIRNGMIEDARQLFNNMQKR----DVYSWSAMISGYAQNEQPNMAL 404
+AS NAL+AG RN + +A LF R +V SW+++++ QN + A+
Sbjct: 215 SHMDVASCNALVAGLSRNAQVSEALLLFREFICRGVELNVVSWTSIVACCVQNGRDLEAV 274
Query: 405 ELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMY 464
+LF M GV+PN +T+ V A A+ L GR AH + L + + +A++DMY
Sbjct: 275 DLFRTMQSIGVEPNSVTIPCVLPAFANVAALMHGRSAHCFSLRKGFLHDVYVGSALVDMY 334
Query: 465 AKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSIT 524
AKCG A +F + R +V WNA+I G AMHGDA ++++ ++K K + +T
Sbjct: 335 AKCGKARHARTIFDAMPSR--NVVSWNAMIGGYAMHGDAANAVQLFCSMQKCKQKPDLVT 392
Query: 525 FIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSM 584
F VL C AGL + G RYF M+ + + P ++HY CMV LLGR+G+L++A ++I M
Sbjct: 393 FTCVLGACSQAGLTEEGRRYFNEMQQGHGISPRMEHYACMVTLLGRSGKLDEAYDLINEM 452
Query: 585 PMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAF 644
P + D IWG+LL + R++GNV + E AA+ L L+P + + VLLSNIYA W+
Sbjct: 453 PFEPDSCIWGSLLGSCRVYGNVLLAEVAAEKLFQLEPGNAGNYVLLSNIYASKKMWDGVN 512
Query: 645 SIRKEMRDCGMKRLPGFS 662
+R EM++ G+K+ G S
Sbjct: 513 RVRDEMKNMGLKKEKGCS 530
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 109/463 (23%), Positives = 201/463 (43%), Gaps = 49/463 (10%)
Query: 26 LVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCS 85
L SAL+ C A + +H+ SGL + F+ +SL++ Y + G A+S+FD
Sbjct: 23 LPSALKSCPAQ---PLARALHAAAVVSGLAEDPFVASSLLHSYIRLGATGAARSVFDRMP 79
Query: 86 TLDPVACNIMISGY-IRNDR------LNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWRE 138
+ V + +I+GY R D L R + + +++ ++ G ++ +
Sbjct: 80 EKNVVGWSALIAGYSARGDAEAAWGLLEQMRSAGVEPNV---ITWNGLVSGLNRSGRALD 136
Query: 139 ALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLN 198
A+ M G P+ ++ +S+ + + + +HG V+K + T L++
Sbjct: 137 AVTALVRMHSEGFFPDATGVSCALSAVGDVKEVSVGKQVHGYVVKAGCRLDACVVTALID 196
Query: 199 MYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVE----LARELFERIPSKDVVS 254
MY C E +F E ++ S N ++ G ++ V L RE R +VVS
Sbjct: 197 MYGKCGRADEIVRVFHESSHMDVASCNALVAGLSRNAQVSEALLLFREFICRGVELNVVS 256
Query: 255 WGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIV 314
W +++ +Q R EA+ ++R M G+ PN V I ++ A A G H +
Sbjct: 257 WTSIVACCVQNGRDLEAVDLFRTMQSIGVEPNSVTIPCVLPAFANVAALMHGRSAHCFSL 316
Query: 315 KAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQ 374
+ GF ++ + ++ YA CG+ AR F+ ++ SWNA+I G+ +G +A Q
Sbjct: 317 RKGFLHDVYVGSALVDMYAKCGKARHARTIFDAMPSRNVVSWNAMIGGYAMHGDAANAVQ 376
Query: 375 LFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGT 434
LF +MQK KP+ +T V A + +G
Sbjct: 377 LFCSMQK-------------------------------CKQKPDLVTFTCVLGACSQAGL 405
Query: 435 LKEG-RWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEV 476
+EG R+ +E + I+ A ++ + + G ++ A+++
Sbjct: 406 TEEGRRYFNEMQQGHGISPRMEHYACMVTLLGRSGKLDEAYDL 448
>gi|297805814|ref|XP_002870791.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316627|gb|EFH47050.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 674
Score = 299 bits (766), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 188/630 (29%), Positives = 310/630 (49%), Gaps = 97/630 (15%)
Query: 38 AVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMIS 97
++S G IH I +S + ++QN+L+ +Y G
Sbjct: 132 SISLGLVIHGRILRSWFGMDKYVQNALLAMYMNFG------------------------- 166
Query: 98 GYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVT 157
R+ AR VFD + +S+ +MI G+ +N +AL +F M GV P+ T
Sbjct: 167 ------RVEMARNVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNEGVDPDHAT 220
Query: 158 LASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMK 217
+ S++ HL G+ R +H LVE + L D+++
Sbjct: 221 IVSMLPVCGHLKGLEMGRNVH--------------------------KLVEEKRLGDKIE 254
Query: 218 ERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRA 277
+N ++N + K G ++ AR +F R+ +DV++W MI+GY++ + AL + R
Sbjct: 255 VKN-----ALVNMYLKCGRMDEARFVFGRMERRDVITWTCMINGYIEDGDVENALELCRL 309
Query: 278 MLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFI-QATIIHFYAACG 336
M +G+ PN V I L+SACG A+ +G +H ++ C D I + ++I YA C
Sbjct: 310 MQFEGVRPNAVTIASLVSACGDALKLNDGKCLHGWAIRQKV-CSDIIIETSLISMYAKCK 368
Query: 337 RINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQ 396
I+L F ++H W+A+IAG ++N ++ DA LF M++ DV
Sbjct: 369 HIDLCFRVFSGASRNHTGPWSAIIAGCVQNELVRDALDLFKRMRREDV------------ 416
Query: 397 NEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNL 456
+PN+A T+ S+ A A+ L++ H Y+ + +
Sbjct: 417 --EPNIA-----------------TLNSLLPAYATLADLRQTMNIHCYLTKTGFMSSLDA 457
Query: 457 SAAIIDMYAKCGSINTAFEVFYHIRDRTTS--VSPWNAIICGLAMHGDANLTLKIYSDLE 514
+ ++ +Y+KCG++ +A ++F I+++ S V W A+I G MHGD + L+++ ++
Sbjct: 458 ATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMV 517
Query: 515 KRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQL 574
+ + N ITF L+ C H+GLV+ G F M Y HY C+VDLLGRAG+L
Sbjct: 518 RSGVTPNEITFTSALNACSHSGLVEEGLTLFSFMLEHYKTLARSNHYTCIVDLLGRAGRL 577
Query: 575 EDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIY 634
++A +I ++P + IWG LLAA H NV++GE AA L L+P + + VLL+NIY
Sbjct: 578 DEAYNLITTIPFEPTSTIWGALLAACVTHENVQLGEMAANKLFELEPENTGNYVLLANIY 637
Query: 635 ADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
A GRW+D +R M + G+++ PG S +
Sbjct: 638 AALGRWKDMEKVRNMMENVGLRKKPGHSTI 667
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 120/486 (24%), Positives = 202/486 (41%), Gaps = 99/486 (20%)
Query: 25 ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSC 84
+VS L C + G+ +H L+ + L ++N+L+N+Y KCG + +A+ +F
Sbjct: 220 TIVSMLPVCGHLKGLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFGRM 279
Query: 85 STLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFR 144
D + MI+GYI + G +N ALE+ R
Sbjct: 280 ERRDVITWTCMINGYIED--------------------------GDVEN-----ALELCR 308
Query: 145 DMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCS 204
M+ GV PN VT+AS++S+ + + + LHG I+ + +II T+L++MY C
Sbjct: 309 LMQFEGVRPNAVTIASLVSACGDALKLNDGKCLHGWAIRQKVCSDIIIETSLISMYAKCK 368
Query: 205 SLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQ 264
+ +F + W+ ++ G + LV A +LF+R+ +DV
Sbjct: 369 HIDLCFRVFSGASRNHTGPWSAIIAGCVQNELVRDALDLFKRMRREDV------------ 416
Query: 265 VERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFI 324
PN + L+ A + + IH + K GF
Sbjct: 417 -------------------EPNIATLNSLLPAYATLADLRQTMNIHCYLTKTGFMSSLDA 457
Query: 325 QATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQK--- 381
++H Y+ CG + E A ++FN +Q+
Sbjct: 458 ATGLVHVYSKCGTL-------------------------------ESAHKIFNGIQEKHK 486
Query: 382 -RDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRW 440
+DV W A+ISGY + + AL++F MV +GV PNEIT S A + SG ++EG
Sbjct: 487 SKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLT 546
Query: 441 AHEYVLNNSITL-NDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAM 499
++L + TL N I+D+ + G ++ A+ + I TS + W A++
Sbjct: 547 LFSFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTS-TIWGALLAACVT 605
Query: 500 HGDANL 505
H + L
Sbjct: 606 HENVQL 611
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 157/346 (45%), Gaps = 38/346 (10%)
Query: 195 NLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLN---GFAKAGLVELARELFERIPSKD 251
+LLN Y S+ + ++L + VS +++ +A G + AR+LF+ +P
Sbjct: 20 SLLNHYAATQSISKTKALHCHVITGGRVSGHILSTLSVTYALCGHIAYARKLFDEMPQSS 79
Query: 252 VVSWGTMIDGYLQVERLSEALTMYRAMLCDGI--APNDVMIVDLISACGRAMAFGEGLQI 309
++S+ +I Y++ +A+ ++ M+ +GI P+ + A G + GL I
Sbjct: 80 LLSYNIVIRMYVRDGLYHDAINVFIRMVSEGIKCVPDGYTYPFVAKAAGELKSISLGLVI 139
Query: 310 HSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMI 369
H I+++ F ++Q ++ Y GR+ +AR F++ + SWN +I+G+ RNG +
Sbjct: 140 HGRILRSWFGMDKYVQNALLAMYMNFGRVEMARNVFDVMKNRDVISWNTMISGYYRNGYM 199
Query: 370 EDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAI 429
DA +F+ W MV+ GV P+ T+VS+
Sbjct: 200 NDALMMFD---------W----------------------MVNEGVDPDHATIVSMLPVC 228
Query: 430 ASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSP 489
L+ GR H+ V + + A+++MY KCG ++ A VF + R V
Sbjct: 229 GHLKGLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFGRMERR--DVIT 286
Query: 490 WNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHA 535
W +I G GD L++ ++ ++ N++T ++S C A
Sbjct: 287 WTCMINGYIEDGDVENALELCRLMQFEGVRPNAVTIASLVSACGDA 332
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 72/162 (44%), Gaps = 28/162 (17%)
Query: 13 QKANLQNSDYELALVSALRYCSAHIA-VSQGQQIHSLIFKSGLESNTFIQNSLINLYAKC 71
++ ++ + +A +++L A +A + Q IH + K+G S+ L+++Y+KC
Sbjct: 409 KRMRREDVEPNIATLNSLLPAYATLADLRQTMNIHCYLTKTGFMSSLDAATGLVHVYSKC 468
Query: 72 GLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFA 131
G + A +F+ + +K K V + ++I G+
Sbjct: 469 GTLESAHKIFNG---------------------------IQEKHKSKDVVLWGALISGYG 501
Query: 132 QNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWE 173
+ AL+VF +M GV PNE+T S +++ H G + E
Sbjct: 502 MHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEE 543
>gi|115468780|ref|NP_001057989.1| Os06g0597500 [Oryza sativa Japonica Group]
gi|50725579|dbj|BAD33047.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|113596029|dbj|BAF19903.1| Os06g0597500 [Oryza sativa Japonica Group]
gi|125597760|gb|EAZ37540.1| hypothetical protein OsJ_21869 [Oryza sativa Japonica Group]
Length = 530
Score = 299 bits (766), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 173/539 (32%), Positives = 280/539 (51%), Gaps = 37/539 (6%)
Query: 126 MIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLM 185
+I A+ + + V+ D+R G++ + T V+ + L E R H +K
Sbjct: 20 LIRTLARRGSFARVMAVYYDLRARGLVADSFTYPFVLRAVGVLKLSVEGRKAHAAAVKTG 79
Query: 186 IDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFE 245
++L+ MY ML G V++AR++F+
Sbjct: 80 FRWDAYTGSSLMEMY-------------------------TML------GRVDIARKVFD 108
Query: 246 RIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGE 305
+PS+ +V W M+ Y++ S A+ + M G+ P+ V +V ++AC RA
Sbjct: 109 EMPSRALVLWNMMVRCYIRCGWYSAAVALSEQMERSGVTPDRVTLVTAVTACSRARDLSL 168
Query: 306 GLQIHSIIVKA-GFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFI 364
G +IH + GF+ + ++ Y + A FE +I SW L++G+
Sbjct: 169 GRRIHVYMDNVFGFNLP--VANALLDMYTKNDCLEEAVKLFEQMPARNIISWTILVSGYG 226
Query: 365 RNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVS 424
G ++ AR LFN +++D+ W+AMI+ Q+ AL LF M V+P+ T+V+
Sbjct: 227 LAGQLDKARVLFNQCKEKDLILWTAMINACVQHGCFEEALTLFRDMQMQRVEPDRFTVVT 286
Query: 425 VFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRT 484
+ A+ G L +G W H+Y + ++ L A+IDMY+KCG I + EVF+ ++ R
Sbjct: 287 LLTCCANLGALDQGEWIHQYAEQRKMKIDAVLGTALIDMYSKCGHIEKSLEVFWRMQGR- 345
Query: 485 TSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERY 544
+ W AIICGLA +G A L+++ D+++ +K + +TFIGVLS CCH GLVD G +
Sbjct: 346 -DATAWTAIICGLATNGQAGRALELFQDMQRSKVKPDGVTFIGVLSACCHGGLVDEGRKQ 404
Query: 545 FKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVV-IWGTLLAASRIH 603
F +M+ VY +EP ++HY C+V+LLGRAG L++AE +I +P+ D + ++G LL A + H
Sbjct: 405 FHAMREVYQIEPRVEHYSCLVNLLGRAGLLDEAERLIGDVPINKDAMPLFGALLTACKAH 464
Query: 604 GNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
GNVE+ ER K + +L+SN+YA A RWED +R +M +K+ G S
Sbjct: 465 GNVEMSERLTKRICEQDSQITDVNLLMSNVYATASRWEDVIRVRGKMAHPTVKKNAGCS 523
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 111/489 (22%), Positives = 215/489 (43%), Gaps = 68/489 (13%)
Query: 41 QGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYI 100
+G++ H+ K+G + + +SL+ +Y G
Sbjct: 67 EGRKAHAAAVKTGFRWDAYTGSSLMEMYTMLG---------------------------- 98
Query: 101 RNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLAS 160
R++ AR+VFD+ P + V + M+ + + + A+ + M GV P+ VTL +
Sbjct: 99 ---RVDIARKVFDEMPSRALVLWNMMVRCYIRCGWYSAAVALSEQMERSGVTPDRVTLVT 155
Query: 161 VISSSVHLGGIWECRMLHGLVIKLMIDGF-VIISTNLLNMYCVCSSLVEARSLFDEMKER 219
+++ + R +H V + GF + ++ LL+MY L EA LF++M R
Sbjct: 156 AVTACSRARDLSLGRRIH--VYMDNVFGFNLPVANALLDMYTKNDCLEEAVKLFEQMPAR 213
Query: 220 NIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAML 279
NI+SW ++++G+ AG ++ AR LF + KD++ W MI+ +Q EALT++R M
Sbjct: 214 NIISWTILVSGYGLAGQLDKARVLFNQCKEKDLILWTAMINACVQHGCFEEALTLFRDMQ 273
Query: 280 CDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRIN 339
+ P+ +V L++ C A +G IH + + +I Y+ CG I
Sbjct: 274 MQRVEPDRFTVVTLLTCCANLGALDQGEWIHQYAEQRKMKIDAVLGTALIDMYSKCGHI- 332
Query: 340 LARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQ 399
E + ++F MQ RD +W+A+I G A N Q
Sbjct: 333 ------------------------------EKSLEVFWRMQGRDATAWTAIICGLATNGQ 362
Query: 400 PNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLS-- 457
ALELF M + VKP+ +T + V A G + EGR + + + +
Sbjct: 363 AGRALELFQDMQRSKVKPDGVTFIGVLSACCHGGLVDEGR-KQFHAMREVYQIEPRVEHY 421
Query: 458 AAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRN 517
+ ++++ + G ++ A + + ++ + A++ HG+ ++ ++ + +++
Sbjct: 422 SCLVNLLGRAGLLDEAERLIGDVPINKDAMPLFGALLTACKAHGNVEMSERLTKRICEQD 481
Query: 518 IKLNSITFI 526
++ + +
Sbjct: 482 SQITDVNLL 490
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 125/241 (51%), Gaps = 1/241 (0%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
+ LV+A+ CS +S G++IH + + N + N+L+++Y K + +A +F+
Sbjct: 150 RVTLVTAVTACSRARDLSLGRRIH-VYMDNVFGFNLPVANALLDMYTKNDCLEEAVKLFE 208
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+ ++ I++SGY +L+ AR +F++ K + +T+MI Q+ C+ EAL +
Sbjct: 209 QMPARNIISWTILVSGYGLAGQLDKARVLFNQCKEKDLILWTAMINACVQHGCFEEALTL 268
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
FRDM++ V P+ T+ ++++ +LG + + +H + + ++ T L++MY
Sbjct: 269 FRDMQMQRVEPDRFTVVTLLTCCANLGALDQGEWIHQYAEQRKMKIDAVLGTALIDMYSK 328
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
C + ++ +F M+ R+ +W ++ G A G A ELF+ + V G G
Sbjct: 329 CGHIEKSLEVFWRMQGRDATAWTAIICGLATNGQAGRALELFQDMQRSKVKPDGVTFIGV 388
Query: 263 L 263
L
Sbjct: 389 L 389
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 101/232 (43%), Gaps = 34/232 (14%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
+V+ L C+ A+ QG+ IH + ++ + + +LI++Y+KCG I KS+
Sbjct: 281 RFTVVTLLTCCANLGALDQGEWIHQYAEQRKMKIDAVLGTALIDMYSKCGHIE--KSL-- 336
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
EVF + + ++T++I G A N ALE+
Sbjct: 337 ---------------------------EVFWRMQGRDATAWTAIICGLATNGQAGRALEL 369
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECR-MLHGLVIKLMIDGFVIISTNLLNMYC 201
F+DM+ V P+ VT V+S+ H G + E R H + I+ V + L+N+
Sbjct: 370 FQDMQRSKVKPDGVTFIGVLSACCHGGLVDEGRKQFHAMREVYQIEPRVEHYSCLVNLLG 429
Query: 202 VCSSLVEARSLFDE--MKERNIVSWNVMLNGFAKAGLVELARELFERIPSKD 251
L EA L + + + + + +L G VE++ L +RI +D
Sbjct: 430 RAGLLDEAERLIGDVPINKDAMPLFGALLTACKAHGNVEMSERLTKRICEQD 481
>gi|115468242|ref|NP_001057720.1| Os06g0506100 [Oryza sativa Japonica Group]
gi|52075894|dbj|BAD45840.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113595760|dbj|BAF19634.1| Os06g0506100 [Oryza sativa Japonica Group]
Length = 766
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 191/643 (29%), Positives = 310/643 (48%), Gaps = 95/643 (14%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
+ AL SA+R C+ V G+Q+H+ KS S+ +QN+L+ +Y+K GL+
Sbjct: 152 QFALGSAVRACTELGDVGTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLV-------- 203
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+D +F++ K +S+ S+I GFAQ EAL+V
Sbjct: 204 -----------------------DDGFMLFERIKDKDLISWGSIIAGFAQQGFEMEALQV 240
Query: 143 FRDMRILGVI-PNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYC 201
FR+M + G PNE S + +G +HGL IK +D + + +L +MY
Sbjct: 241 FREMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLDRDLYVGCSLSDMYA 300
Query: 202 VCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDG 261
C +L + AR F RI + D+VSW ++++
Sbjct: 301 RCKNL-------------------------------DSARVAFYRIEAPDLVSWNSIVNA 329
Query: 262 YLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCY 321
Y LSEAL ++ M G+ P+ + + L+ AC A G IHS +VK
Sbjct: 330 YSVEGLLSEALVLFSEMRDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVK------ 383
Query: 322 DFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQK 381
LG+ ++ N+L++ + R + A +F+ ++
Sbjct: 384 -------------------------LGLDGDVSVCNSLLSMYARCSDLSSAMDVFHEIKD 418
Query: 382 RDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWA 441
+DV +W+++++ AQ+ P L+LF + + + I++ +V A A G + +
Sbjct: 419 QDVVTWNSILTACAQHNHPEEVLKLFSLLNKSEPSLDRISLNNVLSASAELGYFEMVKQV 478
Query: 442 HEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHG 501
H Y + + LS +ID YAKCGS++ A +F I V W+++I G A G
Sbjct: 479 HAYAFKAGLVDDRMLSNTLIDTYAKCGSLDDAMRLF-EIMGNNRDVFSWSSLIVGYAQFG 537
Query: 502 DANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHY 561
A ++S + I+ N +TFIGVL+ C G V+ G Y+ M+ Y + P +H
Sbjct: 538 YAKEAFDLFSRMRSLGIRPNHVTFIGVLTACSRVGFVNEGCYYYSIMEPEYGIVPTREHC 597
Query: 562 GCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQP 621
C+VDLL RAG+L +A I MP + D+++W TLLAAS++H ++E+G+RAA+ + + P
Sbjct: 598 SCIVDLLARAGKLTEAANFIDQMPFEPDIIMWKTLLAASKMHNDMEMGKRAAEGILNIDP 657
Query: 622 SHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
SH + VLL NIYA +G W + ++K MR G+K+ PG S V
Sbjct: 658 SHSAAYVLLCNIYAASGNWNEFARLKKAMRTSGVKKSPGKSWV 700
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 94/414 (22%), Positives = 181/414 (43%), Gaps = 36/414 (8%)
Query: 220 NIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAML 279
N V N ++ + + + AR++F+ +P+++ VSW ++I ++Q R +AL ++ +ML
Sbjct: 85 NTVLGNHLITMYGRCAAPDSARQVFDEMPARNPVSWASVIAAHVQNGRAGDALGLFSSML 144
Query: 280 CDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRIN 339
G A + + + AC G G Q+H+ +K+ +Q ++ Y+ G ++
Sbjct: 145 RSGTAADQFALGSAVRACTELGDVGTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVD 204
Query: 340 LARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQ 399
+ FE + SW ++IAGF + G +A Q+F M
Sbjct: 205 DGFMLFERIKDKDLISWGSIIAGFAQQGFEMEALQVFREM-------------------- 244
Query: 400 PNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAA 459
+V+ PNE S F A + G+ + G H + + + + +
Sbjct: 245 ----------IVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLDRDLYVGCS 294
Query: 460 IIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIK 519
+ DMYA+C ++++A FY I + WN+I+ ++ G + L ++S++ ++
Sbjct: 295 LSDMYARCKNLDSARVAFYRI--EAPDLVSWNSIVNAYSVEGLLSEALVLFSEMRDSGLR 352
Query: 520 LNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEE 579
+ IT G+L C + G R S ++ D+ ++ + R L A +
Sbjct: 353 PDGITVRGLLCACVGRDALYHG-RLIHSYLVKLGLDGDVSVCNSLLSMYARCSDLSSAMD 411
Query: 580 VIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNI 633
V + DVV W ++L A H + E + L +PS R+ L+N+
Sbjct: 412 VFHEIK-DQDVVTWNSILTACAQHNHPEEVLKLFSLLNKSEPS--LDRISLNNV 462
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 138/314 (43%), Gaps = 31/314 (9%)
Query: 293 LISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDH 352
L+SAC R + +G ++H +V + D A+L + +H
Sbjct: 50 LVSACSRLRSLPQGRRVHRHLVASSSSSPD------------------AQLAGNTVLGNH 91
Query: 353 IASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVD 412
LI + R + ARQ+F+ M R+ SW+++I+ + QN + AL LF M+
Sbjct: 92 ------LITMYGRCAAPDSARQVFDEMPARNPVSWASVIAAHVQNGRAGDALGLFSSMLR 145
Query: 413 AGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINT 472
+G ++ + S A G + GR H + L + + + A++ MY+K G ++
Sbjct: 146 SGTAADQFALGSAVRACTELGDVGTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVDD 205
Query: 473 AFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDL-EKRNIKLNSITFIGVLST 531
F +F I+D+ + W +II G A G L+++ ++ + + N F
Sbjct: 206 GFMLFERIKDK--DLISWGSIIAGFAQQGFEMEALQVFREMIVEGSHHPNEFHFGSAFRA 263
Query: 532 CCHAGLVDLGERYFKSMKSVYNVEPDLKHYGC-MVDLLGRAGQLEDAEEVIRSMPMKADV 590
C G + GE+ + Y ++ DL + GC + D+ R L+ A + D+
Sbjct: 264 CGAVGSWEYGEQ-IHGLSIKYRLDRDL-YVGCSLSDMYARCKNLDSARVAFYRIE-APDL 320
Query: 591 VIWGTLLAASRIHG 604
V W +++ A + G
Sbjct: 321 VSWNSIVNAYSVEG 334
>gi|224099379|ref|XP_002311462.1| predicted protein [Populus trichocarpa]
gi|222851282|gb|EEE88829.1| predicted protein [Populus trichocarpa]
Length = 538
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 169/489 (34%), Positives = 249/489 (50%), Gaps = 65/489 (13%)
Query: 237 VELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISA 296
+E A ++F++IP + W M GY Q E + + ++R M + PN ++ +
Sbjct: 1 MENAHKVFDQIPEPNASIWNAMFRGYSQNESHKDVIVLFRQMKGLDVMPNCFTFPVILKS 60
Query: 297 CGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRIN----------------- 339
C + A EG ++H ++K+GF F+ T+I YA+ G I+
Sbjct: 61 CVKINALKEGEEVHCFVIKSGFRANPFVATTLIDMYASGGAIHAAYRVFGEMIERNVIAW 120
Query: 340 --------------LARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVY 385
AR F+L + I WN +I+G+I + AR+LF+ M +DV
Sbjct: 121 TAMINGYITCCDLVTARRLFDLAPERDIVLWNTMISGYIEAKDVIRARELFDKMPNKDVM 180
Query: 386 SWSAMISGYAQNEQPNMALELFHGM--------------------------------VDA 413
SW+ +++GYA N LF M VD
Sbjct: 181 SWNTVLNGYASNGDVMACERLFEEMPERNVFSWNALIGGYTRNGCFSEVLSAFKRMLVDG 240
Query: 414 GVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTA 473
V PN+ T+V+V A A G L G+W H Y ++ N + A++DMYAKCG + TA
Sbjct: 241 TVVPNDATLVNVLSACARLGALDLGKWVHVYAESHGYKGNVYVRNALMDMYAKCGVVETA 300
Query: 474 FEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCC 533
+VF + ++ + WN II GLA+HG L ++S ++ + ITFIG+L C
Sbjct: 301 LDVFKSMDNK--DLISWNTIIGGLAVHGHGADALNLFSHMKIAGENPDGITFIGILCACT 358
Query: 534 HAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIW 593
H GLV+ G YFKSM Y++ P ++HYGC+VDLLGRAG L A + IR MP++AD VIW
Sbjct: 359 HMGLVEDGFSYFKSMTDDYSIVPRIEHYGCIVDLLGRAGLLAHAVDFIRKMPIEADAVIW 418
Query: 594 GTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDC 653
LL A R++ NVE+ E A + L +P + + V+LSNIY D GRW+D ++ MRD
Sbjct: 419 AALLGACRVYKNVELAELALEKLIEFEPKNPANYVMLSNIYGDFGRWKDVARLKVAMRDT 478
Query: 654 GMKRLPGFS 662
G K+LPG S
Sbjct: 479 GFKKLPGCS 487
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 117/480 (24%), Positives = 206/480 (42%), Gaps = 99/480 (20%)
Query: 105 LNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISS 164
+ +A +VFD+ P + +M G++QN+ ++ + +FR M+ L V+PN T ++ S
Sbjct: 1 MENAHKVFDQIPEPNASIWNAMFRGYSQNESHKDVIVLFRQMKGLDVMPNCFTFPVILKS 60
Query: 165 SVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSW 224
V + + E +H VIK ++T L++MY ++ A +F EM ERN+++W
Sbjct: 61 CVKINALKEGEEVHCFVIKSGFRANPFVATTLIDMYASGGAIHAAYRVFGEMIERNVIAW 120
Query: 225 NVMLNGFAK--------------------------AGLVEL-----ARELFERIPSKDVV 253
M+NG+ +G +E ARELF+++P+KDV+
Sbjct: 121 TAMINGYITCCDLVTARRLFDLAPERDIVLWNTMISGYIEAKDVIRARELFDKMPNKDVM 180
Query: 254 SWGTMIDGY------LQVERL-------------------------SEALTMYRAMLCDG 282
SW T+++GY + ERL SE L+ ++ ML DG
Sbjct: 181 SWNTVLNGYASNGDVMACERLFEEMPERNVFSWNALIGGYTRNGCFSEVLSAFKRMLVDG 240
Query: 283 -IAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLA 341
+ PND +V+++SAC R A G +H G+ +++ ++ YA CG + A
Sbjct: 241 TVVPNDATLVNVLSACARLGALDLGKWVHVYAESHGYKGNVYVRNALMDMYAKCGVVETA 300
Query: 342 RLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPN 401
F+ + SWN +I G +G DA LF++M+
Sbjct: 301 LDVFKSMDNKDLISWNTIIGGLAVHGHGADALNLFSHMKI-------------------- 340
Query: 402 MALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG-RWAHEYVLNNSITLNDNLSAAI 460
AG P+ IT + + CA G +++G + + SI I
Sbjct: 341 -----------AGENPDGITFIGILCACTHMGLVEDGFSYFKSMTDDYSIVPRIEHYGCI 389
Query: 461 IDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGD---ANLTLKIYSDLEKRN 517
+D+ + G + A + + +V W A++ ++ + A L L+ + E +N
Sbjct: 390 VDLLGRAGLLAHAVDFIRKMPIEADAVI-WAALLGACRVYKNVELAELALEKLIEFEPKN 448
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 93/387 (24%), Positives = 160/387 (41%), Gaps = 75/387 (19%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLIS-------------- 75
L+ C A+ +G+++H + KSG +N F+ +LI++YA G I
Sbjct: 58 LKSCVKINALKEGEEVHCFVIKSGFRANPFVATTLIDMYASGGAIHAAYRVFGEMIERNV 117
Query: 76 -----------------QAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIK 118
A+ +FD D V N MISGYI + ARE+FDK P K
Sbjct: 118 IAWTAMINGYITCCDLVTARRLFDLAPERDIVLWNTMISGYIEAKDVIRARELFDKMPNK 177
Query: 119 CCVSYTSMIMGFA-------------------------------QNDCWREALEVFRDMR 147
+S+ +++ G+A +N C+ E L F+ M
Sbjct: 178 DVMSWNTVLNGYASNGDVMACERLFEEMPERNVFSWNALIGGYTRNGCFSEVLSAFKRML 237
Query: 148 ILG-VIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSL 206
+ G V+PN+ TL +V+S+ LG + + +H G V + L++MY C +
Sbjct: 238 VDGTVVPNDATLVNVLSACARLGALDLGKWVHVYAESHGYKGNVYVRNALMDMYAKCGVV 297
Query: 207 VEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIP----SKDVVSWGTMIDGY 262
A +F M ++++SWN ++ G A G A LF + + D +++ ++
Sbjct: 298 ETALDVFKSMDNKDLISWNTIIGGLAVHGHGADALNLFSHMKIAGENPDGITFIGILCAC 357
Query: 263 LQVERLSEALTMYRAMLCD-GIAPNDVMIVDLISACGRAMAFGEGLQIHSI--IVKAGFD 319
+ + + + +++M D I P ++ GRA GL H++ I K +
Sbjct: 358 THMGLVEDGFSYFKSMTDDYSIVPRIEHYGCIVDLLGRA-----GLLAHAVDFIRKMPIE 412
Query: 320 CYDFIQATIIHFYAACGRINLARLQFE 346
I A ++ + LA L E
Sbjct: 413 ADAVIWAALLGACRVYKNVELAELALE 439
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/254 (20%), Positives = 101/254 (39%), Gaps = 65/254 (25%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
+ LV+ L C+ A+ G+ +H G + N +++N+L+++YAKCG++ A +F
Sbjct: 246 DATLVNVLSACARLGALDLGKWVHVYAESHGYKGNVYVRNALMDMYAKCGVVETALDVFK 305
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
S D +S+ ++I G A + +AL +
Sbjct: 306 SMDNKD-------------------------------LISWNTIIGGLAVHGHGADALNL 334
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
F M+I G P+ +T ++ + H+G L+ DGF
Sbjct: 335 FSHMKIAGENPDGITFIGILCACTHMG--------------LVEDGFSYF---------- 370
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIP-SKDVVSWGTMIDG 261
S+ + S+ ++ + +++ +AGL+ A + ++P D V W ++
Sbjct: 371 -KSMTDDYSIVPRIEH-----YGCIVDLLGRAGLLAHAVDFIRKMPIEADAVIWAALLGA 424
Query: 262 ---YLQVERLSEAL 272
Y VE AL
Sbjct: 425 CRVYKNVELAELAL 438
>gi|449531466|ref|XP_004172707.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like, partial [Cucumis sativus]
Length = 610
Score = 299 bits (765), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 170/488 (34%), Positives = 244/488 (50%), Gaps = 69/488 (14%)
Query: 240 ARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGR 299
AR LF+ P V W + GY E + ++ M + PN ++ +C +
Sbjct: 76 ARHLFDHFPDPKVELWNAISRGYFHNAFYREVVFLFGKMKSMDVRPNCFTFPLVLKSCAK 135
Query: 300 AMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAA------------------------- 334
AF EG +IH ++K G + F+ T+I Y+
Sbjct: 136 IGAFVEGEEIHCEVIKGGLEGNQFVATTLIDVYSGGRAIGSAYKLFVGMLERNIVAWTSM 195
Query: 335 ------CGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWS 388
C R+ LAR F+L + + WN +++G+I G ++ AR+LF+ M RD SW+
Sbjct: 196 ISGYILCNRVALARRLFDLAPERDVVLWNIMVSGYIEIGDMKAARKLFDTMPYRDTMSWN 255
Query: 389 AMISGYAQNEQPNMALELFHGM--------------------------------VDAGVK 416
M++GYA N +LF M +D V
Sbjct: 256 TMLNGYANNGDVEACEQLFEEMPERNVFSWNGLIGGYAHNGCFFEVLRCFKRMLIDGLVV 315
Query: 417 PNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEV 476
PN+ T+V+V A A G L G+W H Y + + A+IDMY+KCG I A EV
Sbjct: 316 PNDATLVTVLSACARLGALDLGKWVHVYAATIGFKGSIYVGNALIDMYSKCGLIENAMEV 375
Query: 477 F--YHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCH 534
F ++D T WN++ICGLA HG L ++ ++ K + ITFIGVL +C H
Sbjct: 376 FESMDLKDLIT----WNSMICGLATHGCGADALTLFHQMKINGEKPDGITFIGVLCSCTH 431
Query: 535 AGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWG 594
GLV+ G YF SM + Y++ P ++HYGCMVDL GRAG L+ A E ++ MPM+AD VIW
Sbjct: 432 LGLVEEGTSYFNSMVNEYSIAPQIEHYGCMVDLFGRAGLLDRAIEFVKRMPMEADAVIWA 491
Query: 595 TLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCG 654
LL A RI+ N+++ E A + L L+P + + VLLSNIY D GRW+D ++ MRD G
Sbjct: 492 ALLGACRIYKNIDLAELALQKLIVLEPKNPANYVLLSNIYGDLGRWKDVARLKILMRDTG 551
Query: 655 MKRLPGFS 662
K+LPG S
Sbjct: 552 SKKLPGCS 559
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 137/549 (24%), Positives = 225/549 (40%), Gaps = 107/549 (19%)
Query: 42 GQQIHSLIFKSGLESNTFIQNSLINLYAKCGLIS-----QAKSMFDSCSTLDPVACNIMI 96
G+ L++ + ++ I+L C ++ QA+ + VA N++
Sbjct: 6 GKIAKLLLYSAQKHPRWVLEEHFISLLRSCKTVALLQKVQAQIITHGFQYNGYVAPNVVT 65
Query: 97 SGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEV 156
S ++ ++ AR +FD P + ++ G+ N +RE + +F M+ + V PN
Sbjct: 66 S-WVGLKQMAHARHLFDHFPDPKVELWNAISRGYFHNAFYREVVFLFGKMKSMDVRPNCF 124
Query: 157 TLASVISSSVHLGGIWECRMLHGLVIKLMIDG--FVIIS--------------------- 193
T V+ S +G E +H VIK ++G FV +
Sbjct: 125 TFPLVLKSCAKIGAFVEGEEIHCEVIKGGLEGNQFVATTLIDVYSGGRAIGSAYKLFVGM 184
Query: 194 --------TNLLNMYCVCSSLVEARSLFDEMKERNIV----------------------- 222
T++++ Y +C+ + AR LFD ER++V
Sbjct: 185 LERNIVAWTSMISGYILCNRVALARRLFDLAPERDVVLWNIMVSGYIEIGDMKAARKLFD 244
Query: 223 --------SWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTM 274
SWN MLNG+A G VE +LFE +P ++V SW +I GY E L
Sbjct: 245 TMPYRDTMSWNTMLNGYANNGDVEACEQLFEEMPERNVFSWNGLIGGYAHNGCFFEVLRC 304
Query: 275 YRAMLCDG-IAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYA 333
++ ML DG + PND +V ++SAC R A G +H GF ++ +I Y+
Sbjct: 305 FKRMLIDGLVVPNDATLVTVLSACARLGALDLGKWVHVYAATIGFKGSIYVGNALIDMYS 364
Query: 334 ACGRINLARLQFE-LGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMIS 392
CG I A FE + +KD I +WN++I G +G D
Sbjct: 365 KCGLIENAMEVFESMDLKDLI-TWNSMICGLATHGCGAD--------------------- 402
Query: 393 GYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNN-SIT 451
AL LFH M G KP+ IT + V C+ G ++EG ++N SI
Sbjct: 403 ----------ALTLFHQMKINGEKPDGITFIGVLCSCTHLGLVEEGTSYFNSMVNEYSIA 452
Query: 452 LNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGD---ANLTLK 508
++D++ + G ++ A E + +V W A++ ++ + A L L+
Sbjct: 453 PQIEHYGCMVDLFGRAGLLDRAIEFVKRMPMEADAVI-WAALLGACRIYKNIDLAELALQ 511
Query: 509 IYSDLEKRN 517
LE +N
Sbjct: 512 KLIVLEPKN 520
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 102/236 (43%), Gaps = 62/236 (26%)
Query: 25 ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSC 84
LV+ L C+ A+ G+ +H G + + ++ N+LI++Y+KCGLI A +F+S
Sbjct: 320 TLVTVLSACARLGALDLGKWVHVYAATIGFKGSIYVGNALIDMYSKCGLIENAMEVFESM 379
Query: 85 STLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFR 144
+K +++ SMI G A + C +AL +F
Sbjct: 380 D-------------------------------LKDLITWNSMICGLATHGCGADALTLFH 408
Query: 145 DMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCS 204
M+I G P+ +T V+ S HLG + E T+ N
Sbjct: 409 QMKINGEKPDGITFIGVLCSCTHLGLVEE-------------------GTSYFN------ 443
Query: 205 SLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSK-DVVSWGTMI 259
S+V S+ +++ + M++ F +AGL++ A E +R+P + D V W ++
Sbjct: 444 SMVNEYSIAPQIEH-----YGCMVDLFGRAGLLDRAIEFVKRMPMEADAVIWAALL 494
>gi|449441542|ref|XP_004138541.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Cucumis sativus]
Length = 652
Score = 299 bits (765), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 170/488 (34%), Positives = 244/488 (50%), Gaps = 69/488 (14%)
Query: 240 ARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGR 299
AR LF+ P V W + GY E + ++ M + PN ++ +C +
Sbjct: 118 ARHLFDHFPDPKVELWNAISRGYFHNAFYREVVFLFGKMKSMDVRPNCFTFPLVLKSCAK 177
Query: 300 AMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAA------------------------- 334
AF EG +IH ++K G + F+ T+I Y+
Sbjct: 178 IGAFVEGEEIHCEVIKGGLEGNQFVATTLIDVYSGGRAIGSAYKLFVGMLERNIVAWTSM 237
Query: 335 ------CGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWS 388
C R+ LAR F+L + + WN +++G+I G ++ AR+LF+ M RD SW+
Sbjct: 238 ISGYILCNRVALARRLFDLAPERDVVLWNIMVSGYIEIGDMKAARKLFDTMPYRDTMSWN 297
Query: 389 AMISGYAQNEQPNMALELFHGM--------------------------------VDAGVK 416
M++GYA N +LF M +D V
Sbjct: 298 TMLNGYANNGDVEACEQLFEEMPERNVFSWNGLIGGYAHNGCFFEVLRCFKRMLIDGLVV 357
Query: 417 PNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEV 476
PN+ T+V+V A A G L G+W H Y + + A+IDMY+KCG I A EV
Sbjct: 358 PNDATLVTVLSACARLGALDLGKWVHVYAATIGFKGSIYVGNALIDMYSKCGLIENAMEV 417
Query: 477 F--YHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCH 534
F ++D T WN++ICGLA HG L ++ ++ K + ITFIGVL +C H
Sbjct: 418 FESMDLKDLIT----WNSMICGLATHGCGADALTLFHQMKINGEKPDGITFIGVLCSCTH 473
Query: 535 AGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWG 594
GLV+ G YF SM + Y++ P ++HYGCMVDL GRAG L+ A E ++ MPM+AD VIW
Sbjct: 474 LGLVEEGTSYFNSMVNEYSIAPQIEHYGCMVDLFGRAGLLDRAIEFVKRMPMEADAVIWA 533
Query: 595 TLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCG 654
LL A RI+ N+++ E A + L L+P + + VLLSNIY D GRW+D ++ MRD G
Sbjct: 534 ALLGACRIYKNIDLAELALQKLIVLEPKNPANYVLLSNIYGDLGRWKDVARLKILMRDTG 593
Query: 655 MKRLPGFS 662
K+LPG S
Sbjct: 594 SKKLPGCS 601
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 143/558 (25%), Positives = 224/558 (40%), Gaps = 120/558 (21%)
Query: 47 SLIFKSGLESNT--FIQNSLINLYAKCGLISQAKSMFDSCST---LDPVACNIMISGYIR 101
+L F S N FI ++L + + L S+ SC T L V I+ G+
Sbjct: 38 TLTFYSEWARNNTFFIDDTLTQKHPRWVLEEHFISLLRSCKTVALLQKVQAQIITHGFQY 97
Query: 102 N--------------DRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMR 147
N ++ AR +FD P + ++ G+ N +RE + +F M+
Sbjct: 98 NGYVAPNVVTSWVGLKQMAHARHLFDHFPDPKVELWNAISRGYFHNAFYREVVFLFGKMK 157
Query: 148 ILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDG--FVIIS------------ 193
+ V PN T V+ S +G E +H VIK ++G FV +
Sbjct: 158 SMDVRPNCFTFPLVLKSCAKIGAFVEGEEIHCEVIKGGLEGNQFVATTLIDVYSGGRAIG 217
Query: 194 -----------------TNLLNMYCVCSSLVEARSLFDEMKERNIV-------------- 222
T++++ Y +C+ + AR LFD ER++V
Sbjct: 218 SAYKLFVGMLERNIVAWTSMISGYILCNRVALARRLFDLAPERDVVLWNIMVSGYIEIGD 277
Query: 223 -----------------SWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQV 265
SWN MLNG+A G VE +LFE +P ++V SW +I GY
Sbjct: 278 MKAARKLFDTMPYRDTMSWNTMLNGYANNGDVEACEQLFEEMPERNVFSWNGLIGGYAHN 337
Query: 266 ERLSEALTMYRAMLCDG-IAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFI 324
E L ++ ML DG + PND +V ++SAC R A G +H GF ++
Sbjct: 338 GCFFEVLRCFKRMLIDGLVVPNDATLVTVLSACARLGALDLGKWVHVYAATIGFKGSIYV 397
Query: 325 QATIIHFYAACGRINLARLQFE-LGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRD 383
+I Y+ CG I A FE + +KD I +WN++I G +G D
Sbjct: 398 GNALIDMYSKCGLIENAMEVFESMDLKDLI-TWNSMICGLATHGCGAD------------ 444
Query: 384 VYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHE 443
AL LFH M G KP+ IT + V C+ G ++EG
Sbjct: 445 -------------------ALTLFHQMKINGEKPDGITFIGVLCSCTHLGLVEEGTSYFN 485
Query: 444 YVLNN-SITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGD 502
++N SI ++D++ + G ++ A E + +V W A++ ++ +
Sbjct: 486 SMVNEYSIAPQIEHYGCMVDLFGRAGLLDRAIEFVKRMPMEADAVI-WAALLGACRIYKN 544
Query: 503 ---ANLTLKIYSDLEKRN 517
A L L+ LE +N
Sbjct: 545 IDLAELALQKLIVLEPKN 562
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 102/236 (43%), Gaps = 62/236 (26%)
Query: 25 ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSC 84
LV+ L C+ A+ G+ +H G + + ++ N+LI++Y+KCGLI A +F+S
Sbjct: 362 TLVTVLSACARLGALDLGKWVHVYAATIGFKGSIYVGNALIDMYSKCGLIENAMEVFESM 421
Query: 85 STLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFR 144
+K +++ SMI G A + C +AL +F
Sbjct: 422 D-------------------------------LKDLITWNSMICGLATHGCGADALTLFH 450
Query: 145 DMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCS 204
M+I G P+ +T V+ S HLG + E T+ N
Sbjct: 451 QMKINGEKPDGITFIGVLCSCTHLGLVEE-------------------GTSYFN------ 485
Query: 205 SLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSK-DVVSWGTMI 259
S+V S+ +++ + M++ F +AGL++ A E +R+P + D V W ++
Sbjct: 486 SMVNEYSIAPQIEH-----YGCMVDLFGRAGLLDRAIEFVKRMPMEADAVIWAALL 536
>gi|449449950|ref|XP_004142727.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Cucumis sativus]
Length = 712
Score = 299 bits (765), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 183/636 (28%), Positives = 301/636 (47%), Gaps = 95/636 (14%)
Query: 29 ALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLD 88
L+ C + G +H K+GL ++ F+ ++L+++Y K G I + SC
Sbjct: 122 GLKTCGLGLNYLYGTNLHGFSVKTGLVNSVFVGSALLDMYMKIGEIGR------SC---- 171
Query: 89 PVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRI 148
+VFD+ P + V++T++I G + L F M
Sbjct: 172 ---------------------KVFDEMPTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGR 210
Query: 149 LGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVE 208
V + A + +S G + R +H +K D ++ +L MY C
Sbjct: 211 SKVEYDSYAYAIALKASADSGALNHGRSIHTQTLKKGFDENSFVANSLTTMYNKC----- 265
Query: 209 ARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERL 268
G ++ F ++ + DVVSW T++ Y+Q+ +
Sbjct: 266 --------------------------GKLDYGLHTFRKMRTLDVVSWTTIVTAYIQMGKE 299
Query: 269 SEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATI 328
L ++ M + PN+ +IS C G Q+H+ ++ GF + +I
Sbjct: 300 DCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNALSVANSI 359
Query: 329 IHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWS 388
+ Y+ CG + ++F +M+ RD+ +WS
Sbjct: 360 MTLYSKCGEL-------------------------------ASVSKVFCSMKFRDIITWS 388
Query: 389 AMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNN 448
+I+ Y+Q A E M G KPNE + SV S L++G+ H +VL+
Sbjct: 389 TIIAAYSQVGYGEEAFEYLSRMRSEGPKPNEFALASVLSVCGSMAILEQGKQLHAHVLSV 448
Query: 449 SITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLK 508
+ + +A+I MYAKCGSI A ++F + + W A+I G A HG + ++
Sbjct: 449 GLEQTSMVCSALIIMYAKCGSIAEASKIF--MDSWKDDIISWTAMISGYAEHGHSQEAIE 506
Query: 509 IYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLL 568
++ +++K ++ +S+TFIGVL+ C HAG+VDLG YF SM Y++ P +HYGCM+DLL
Sbjct: 507 LFENIQKVGLRPDSVTFIGVLTACSHAGMVDLGFYYFNSMSKDYHITPSKEHYGCMIDLL 566
Query: 569 GRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRV 628
RAG+L DAE +IRSMP++ D V+W TLL A RIHG+V+ G+RAA + L P+ + +
Sbjct: 567 CRAGRLHDAETLIRSMPIQWDDVVWSTLLRACRIHGDVDCGQRAAAEVLKLDPNCAGTHI 626
Query: 629 LLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
L+NI+A G+W++A +IR M+ G+ + PG+S V
Sbjct: 627 TLANIFAAKGKWKEAANIRMLMKSKGVVKEPGWSSV 662
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 112/492 (22%), Positives = 207/492 (42%), Gaps = 97/492 (19%)
Query: 14 KANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGL 73
++ ++ Y A+ AL+ + A++ G+ IH+ K G + N+F+ NSL +Y KCG
Sbjct: 210 RSKVEYDSYAYAI--ALKASADSGALNHGRSIHTQTLKKGFDENSFVANSLTTMYNKCGK 267
Query: 74 ISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQN 133
+ F TLD V+ +++ YI+ MG +
Sbjct: 268 LDYGLHTFRKMRTLDVVSWTTIVTAYIQ--------------------------MG--KE 299
Query: 134 DCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIIS 193
DC L+ F+ MR VIPNE T ++VIS + + LH V+ + + ++
Sbjct: 300 DC---GLQAFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNALSVA 356
Query: 194 TNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVV 253
+++ +Y C L +F MK R+I++W+ ++ +++ G E A E R+ S
Sbjct: 357 NSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYSQVGYGEEAFEYLSRMRS---- 412
Query: 254 SWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSII 313
+G PN+ + ++S CG +G Q+H+ +
Sbjct: 413 ---------------------------EGPKPNEFALASVLSVCGSMAILEQGKQLHAHV 445
Query: 314 VKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDAR 373
+ G + + + +I YA CG I A F KD I SW A+I+G+ +G ++A
Sbjct: 446 LSVGLEQTSMVCSALIIMYAKCGSIAEASKIFMDSWKDDIISWTAMISGYAEHGHSQEAI 505
Query: 374 QLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSG 433
+LF N+QK G++P+ +T + V A + +G
Sbjct: 506 ELFENIQK-------------------------------VGLRPDSVTFIGVLTACSHAG 534
Query: 434 TLKEGRWAHEYVLNN-SITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNA 492
+ G + + + IT + +ID+ + G ++ A + + + V W+
Sbjct: 535 MVDLGFYYFNSMSKDYHITPSKEHYGCMIDLLCRAGRLHDAETLIRSMPIQWDDV-VWST 593
Query: 493 IICGLAMHGDAN 504
++ +HGD +
Sbjct: 594 LLRACRIHGDVD 605
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 100/402 (24%), Positives = 163/402 (40%), Gaps = 40/402 (9%)
Query: 225 NVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIA 284
N L K ++ AR+LF+++P +D VSW +I GY+ SEAL ++ M
Sbjct: 53 NNQLKILVKTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKMRLQSEL 112
Query: 285 PNDVMIVDL-ISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARL 343
D ++ L + CG + + G +H VK G F+ + ++ Y G I +
Sbjct: 113 RIDPFLLSLGLKTCGLGLNYLYGTNLHGFSVKTGLVNSVFVGSALLDMYMKIGEIGRSCK 172
Query: 344 QFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMA 403
F+ + +W A+I G +R G E
Sbjct: 173 VFDEMPTRNAVTWTAVITGLVRAGYSE-------------------------------AG 201
Query: 404 LELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDM 463
L F GM + V+ + A A SG L GR H L N ++ ++ M
Sbjct: 202 LAYFSGMGRSKVEYDSYAYAIALKASADSGALNHGRSIHTQTLKKGFDENSFVANSLTTM 261
Query: 464 YAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSI 523
Y KCG ++ F + RT V W I+ G + L+ + + N+ N
Sbjct: 262 YNKCGKLDYGLHTFRKM--RTLDVVSWTTIVTAYIQMGKEDCGLQAFKRMRASNVIPNEY 319
Query: 524 TFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRS 583
TF V+S C + + GE+ + V V L ++ L + G+L +V S
Sbjct: 320 TFSAVISCCANFARLKWGEQLHAHVLCVGFVNA-LSVANSIMTLYSKCGELASVSKVFCS 378
Query: 584 MPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGP 625
M + D++ W T++AA + V GE A + L+ ++ S GP
Sbjct: 379 MKFR-DIITWSTIIAA---YSQVGYGEEAFEYLSRMR-SEGP 415
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 124/271 (45%), Gaps = 11/271 (4%)
Query: 350 KDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHG 409
K +A N + ++ ++DAR LF+ + +RD SW+ +ISGY + + AL LF
Sbjct: 46 KVDLAEANNQLKILVKTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSK 105
Query: 410 M---VDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAK 466
M + + P +++ C + + G H + + + + + +A++DMY K
Sbjct: 106 MRLQSELRIDPFLLSLGLKTCGLGLNYLY--GTNLHGFSVKTGLVNSVFVGSALLDMYMK 163
Query: 467 CGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFI 526
G I + +VF + R + W A+I GL G + L +S + + ++ +S +
Sbjct: 164 IGEIGRSCKVFDEMPTR--NAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYA 221
Query: 527 GVLSTCCHAGLVDLGER-YFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMP 585
L +G ++ G + +++K ++ + + + + + G+L+ R M
Sbjct: 222 IALKASADSGALNHGRSIHTQTLKKGFDENSFVAN--SLTTMYNKCGKLDYGLHTFRKM- 278
Query: 586 MKADVVIWGTLLAASRIHGNVEVGERAAKSL 616
DVV W T++ A G + G +A K +
Sbjct: 279 RTLDVVSWTTIVTAYIQMGKEDCGLQAFKRM 309
>gi|356529553|ref|XP_003533355.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 540
Score = 299 bits (765), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 157/441 (35%), Positives = 249/441 (56%), Gaps = 11/441 (2%)
Query: 231 FAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVE-----RLSEALTMYRAMLCDGIAP 285
F+ G A +F I + D+ ++ MI Y+ +E +AL +Y+ M C I P
Sbjct: 65 FSYYGSFSYATNVFHMIKNPDLRAYNIMIRAYISMESGDDTHFCKALMLYKQMFCKDIVP 124
Query: 286 NDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQF 345
N + L+ C + + G IH+ ++K GF ++ ++I Y A G ++ AR F
Sbjct: 125 NCLTFPFLLKGCTQWLDGATGQAIHTQVIKFGFLKDVYVANSLISLYMAGGLLSNARKVF 184
Query: 346 ELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALE 405
+ + + +WN+++ G +RNG ++ A LF M R++ +W+++I+G AQ +LE
Sbjct: 185 DEMLVTDVVTWNSMVIGCLRNGGLDMAMDLFRKMNGRNIITWNSIITGLAQGGSAKESLE 244
Query: 406 LFHGM---VDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIID 462
LFH M D VKP++IT+ SV A A G + G+W H Y+ N I + + A+++
Sbjct: 245 LFHEMQILSDDMVKPDKITIASVLSACAQLGAIDHGKWVHGYLRRNGIECDVVIGTALVN 304
Query: 463 MYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNS 522
MY KCG + AFE+F + ++ S W +I A+HG + ++EK +K N
Sbjct: 305 MYGKCGDVQKAFEIFEEMPEK--DASAWTVMISVFALHGLGWKAFNCFLEMEKAGVKPNH 362
Query: 523 ITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIR 582
+TF+G+LS C H+GLV+ G F MK VY++EP + HY CMVD+L RA +++E +IR
Sbjct: 363 VTFVGLLSACAHSGLVEQGRWCFDVMKRVYSIEPQVYHYACMVDILSRARLFDESEILIR 422
Query: 583 SMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWED 642
SMPMK DV +WG LL ++HGNVE+GE+ L L+P + V +IYA AG ++
Sbjct: 423 SMPMKPDVYVWGALLGGCQMHGNVELGEKVVHHLIDLEPHNHAFYVNWCDIYAKAGMFDA 482
Query: 643 AFSIRKEMRDCGM-KRLPGFS 662
A IR M++ + K++PG S
Sbjct: 483 AKRIRNIMKEKRIEKKIPGCS 503
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 110/410 (26%), Positives = 196/410 (47%), Gaps = 67/410 (16%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
L+ C+ + + GQ IH+ + K G + ++ NSLI+LY GL+S A+ +FD D
Sbjct: 133 LKGCTQWLDGATGQAIHTQVIKFGFLKDVYVANSLISLYMAGGLLSNARKVFDEMLVTDV 192
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
V N M+ G +RN L+ A ++F K + +++ S+I G AQ +E+LE+F +M+IL
Sbjct: 193 VTWNSMVIGCLRNGGLDMAMDLFRKMNGRNIITWNSIITGLAQGGSAKESLELFHEMQIL 252
Query: 150 G---VIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSL 206
V P+++T+ASV+S+ LG I + +HG + + I+ V+I T L+NMY C +
Sbjct: 253 SDDMVKPDKITIASVLSACAQLGAIDHGKWVHGYLRRNGIECDVVIGTALVNMYGKCGDV 312
Query: 207 VEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVE 266
+A +F+EM E++ +W VM++ FA GL W + +L++E
Sbjct: 313 QKAFEIFEEMPEKDASAWTVMISVFALHGL-----------------GWKA-FNCFLEME 354
Query: 267 RLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQA 326
+ G+ PN V V L+SAC HS +V+ G C+D ++
Sbjct: 355 K-------------AGVKPNHVTFVGLLSACA-----------HSGLVEQGRWCFDVMKR 390
Query: 327 TIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNM-QKRDVY 385
I+ + + ++ R + +++ L +M K DVY
Sbjct: 391 V-------------------YSIEPQVYHYACMVDILSRARLFDESEILIRSMPMKPDVY 431
Query: 386 SWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTL 435
W A++ G + + ++ H ++D ++P+ +C I + +
Sbjct: 432 VWGALLGGCQMHGNVELGEKVVHHLID--LEPHNHAFYVNWCDIYAKAGM 479
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 125/534 (23%), Positives = 227/534 (42%), Gaps = 77/534 (14%)
Query: 68 YAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMI 127
++ G S A ++F D A NIMI YI + +D
Sbjct: 65 FSYYGSFSYATNVFHMIKNPDLRAYNIMIRAYISMESGDDTH------------------ 106
Query: 128 MGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMID 187
+ +AL +++ M ++PN +T ++ + +H VIK
Sbjct: 107 --------FCKALMLYKQMFCKDIVPNCLTFPFLLKGCTQWLDGATGQAIHTQVIKFGFL 158
Query: 188 GFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERI 247
V ++ +L+++Y L AR +FDEM ++V+WN M+ G + G +++A +LF ++
Sbjct: 159 KDVYVANSLISLYMAGGLLSNARKVFDEMLVTDVVTWNSMVIGCLRNGGLDMAMDLFRKM 218
Query: 248 PSKDVVSWGTMIDGYLQVERLSEALTMYRAMLC---DGIAPNDVMIVDLISACGRAMAFG 304
+++++W ++I G Q E+L ++ M D + P+ + I ++SAC + A
Sbjct: 219 NGRNIITWNSIITGLAQGGSAKESLELFHEMQILSDDMVKPDKITIASVLSACAQLGAID 278
Query: 305 EGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFI 364
G +H + + G +C I +++ Y CG + A FE
Sbjct: 279 HGKWVHGYLRRNGIECDVVIGTALVNMYGKCGDVQKA---FE------------------ 317
Query: 365 RNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVS 424
+F M ++D +W+ MIS +A + A F M AGVKPN +T V
Sbjct: 318 ----------IFEEMPEKDASAWTVMISVFALHGLGWKAFNCFLEMEKAGVKPNHVTFVG 367
Query: 425 VFCAIASSGTLKEGRWAHEYVLNNSITLNDNL--SAAIIDMYAKCGSINTAFEVFYHIRD 482
+ A A SG +++GRW + V+ ++ + A ++D+ ++ + + E+
Sbjct: 368 LLSACAHSGLVEQGRWCFD-VMKRVYSIEPQVYHYACMVDILSRARLFDES-EILIRSMP 425
Query: 483 RTTSVSPWNAIICGLAMHGDANLTLKIYS---DLEKRNIKLNSITFIGVLSTCCHAGLVD 539
V W A++ G MHG+ L K+ DLE N ++ AG+ D
Sbjct: 426 MKPDVYVWGALLGGCQMHGNVELGEKVVHHLIDLEPHNHAF----YVNWCDIYAKAGMFD 481
Query: 540 LGERYFKSMKSVYNVEPDLKHYGC-MVDLLGRAGQLEDAEEVIRSMPMKADVVI 592
+R MK +E + GC M+++ G + +PMK V++
Sbjct: 482 AAKRIRNIMKE-KRIEKKIP--GCSMIEINGEVQEFSAGGS--SELPMKELVLV 530
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 98/233 (42%), Gaps = 45/233 (19%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
++ + S L C+ A+ G+ +H + ++G+E + I +L+N+Y KCG + +A +F
Sbjct: 261 KITIASVLSACAQLGAIDHGKWVHGYLRRNGIECDVVIGTALVNMYGKCGDVQKAFEIF- 319
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
++ P K ++T MI FA + +A
Sbjct: 320 ------------------------------EEMPEKDASAWTVMISVFALHGLGWKAFNC 349
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
F +M GV PN VT ++S+ H G + + R ++ ++ I + + C+
Sbjct: 350 FLEMEKAGVKPNHVTFVGLLSACAHSGLVEQGRWCFDVMKRV-----YSIEPQVYHYACM 404
Query: 203 CSSLVEARSLFDEMK--------ERNIVSWNVMLNGFAKAGLVELARELFERI 247
L AR LFDE + + ++ W +L G G VEL ++ +
Sbjct: 405 VDILSRAR-LFDESEILIRSMPMKPDVYVWGALLGGCQMHGNVELGEKVVHHL 456
>gi|255556729|ref|XP_002519398.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541465|gb|EEF43015.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 615
Score = 299 bits (765), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 167/534 (31%), Positives = 276/534 (51%), Gaps = 69/534 (12%)
Query: 133 NDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVII 192
N+ + ++R M ++G+ P+ TL ++ + C H + L I I
Sbjct: 116 NNTFTHIFSLYRQMLLIGLSPDTYTLPYLLKA---------CSQSHAFIEALQIHAHSI- 165
Query: 193 STNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDV 252
T L N+ N ++ +A +G +E ++F++ P D+
Sbjct: 166 KTGL---------------------SSNLFVKNTLMRFYAVSGFIEAVEKVFDQGPHWDL 204
Query: 253 VSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSI 312
+SW T+I Y ++ SEA+ + M C + + +V ++SAC + F G +I +
Sbjct: 205 ISWTTLIQAYSKMGYPSEAIAAFFRMNCTA---DRMTLVVVLSACSQLGDFTLGKKILAY 261
Query: 313 IVKAGFDCYD--FIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIE 370
+ FD + F+ ++ Y CG+ +LA
Sbjct: 262 MDHHLFDVHSDVFLGNALLDMYLKCGQPHLA----------------------------- 292
Query: 371 DARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIA 430
RQLF+ M +++ SW++MISG A AL +F M G+KP+ +T+V V + A
Sbjct: 293 --RQLFHLMPVKNLVSWNSMISGLAHQGLFKEALHMFRRMQTMGLKPDSVTLVGVLNSCA 350
Query: 431 SSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPW 490
+ G L+ G+W H Y+ N + + ++ A++DMYAKCGSI+ AF VF ++ + V +
Sbjct: 351 NLGDLELGKWVHSYIDKNHMKADGYVANALVDMYAKCGSIDQAFMVFQAMKCK--DVYSY 408
Query: 491 NAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKS 550
A+I G AMHG A+ L I+S++ + ++ + +T +GVLS C HAGL++ G R+F+ M
Sbjct: 409 TAMIVGFAMHGKADRALAIFSEMPRMGVRPDHVTLVGVLSACSHAGLLEEGRRHFQDMSR 468
Query: 551 VYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGE 610
+Y+++P +HYGCMVDLLGRAG + +AE MP+ D +WG+LL A +IH VE+GE
Sbjct: 469 LYHLQPQTEHYGCMVDLLGRAGLISEAEAFTNKMPIVPDASVWGSLLGACKIHAKVELGE 528
Query: 611 RAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
+ L ++P + +L+SNIY+ A RW DA RK M+ +K+ PG S +
Sbjct: 529 TVIQKLIEMEPERDGAYILMSNIYSSANRWRDALKWRKAMKQNNIKKTPGCSSI 582
Score = 128 bits (322), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 117/480 (24%), Positives = 194/480 (40%), Gaps = 102/480 (21%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
L+ CS A + QIH+ K+GL SN F++N+L+ YA
Sbjct: 145 LKACSQSHAFIEALQIHAHSIKTGLSSNLFVKNTLMRFYA-------------------- 184
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
+SG+I +VFD+ P +S+T++I +++ EA+ F M
Sbjct: 185 ------VSGFIEA-----VEKVFDQGPHWDLISWTTLIQAYSKMGYPSEAIAAFFRMNCT 233
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMID--GFVIISTNLLNMYCVCSSLV 207
+ +TL V+S+ LG + + + + D V + LL+MY C
Sbjct: 234 A---DRMTLVVVLSACSQLGDFTLGKKILAYMDHHLFDVHSDVFLGNALLDMYLKCGQPH 290
Query: 208 EARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVER 267
AR LF M +N+VSWN M++G A GL +
Sbjct: 291 LARQLFHLMPVKNLVSWNSMISGLAHQGLFK----------------------------- 321
Query: 268 LSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQAT 327
EAL M+R M G+ P+ V +V ++++C G +HS I K ++
Sbjct: 322 --EALHMFRRMQTMGLKPDSVTLVGVLNSCANLGDLELGKWVHSYIDKNHMKADGYVANA 379
Query: 328 IIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSW 387
++ YA CG I+ A + F+ + S+ A+I GF +G + A +F+ M
Sbjct: 380 LVDMYAKCGSIDQAFMVFQAMKCKDVYSYTAMIVGFAMHGKADRALAIFSEM-------- 431
Query: 388 SAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLN 447
P M GV+P+ +T+V V A + +G L+EGR H ++
Sbjct: 432 ------------PRM-----------GVRPDHVTLVGVLSACSHAGLLEEGR-RHFQDMS 467
Query: 448 NSITLNDNLS--AAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANL 505
L ++D+ + G I+ A E F + S W +++ +H L
Sbjct: 468 RLYHLQPQTEHYGCMVDLLGRAGLISEA-EAFTNKMPIVPDASVWGSLLGACKIHAKVEL 526
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 69/152 (45%), Gaps = 31/152 (20%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+ LV L C+ + G+ +HS I K+ ++++ ++ N+L+++YAKCG I QA +F +
Sbjct: 340 VTLVGVLNSCANLGDLELGKWVHSYIDKNHMKADGYVANALVDMYAKCGSIDQAFMVFQA 399
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
D + MI G FA + AL +F
Sbjct: 400 MKCKDVYSYTAMIVG-------------------------------FAMHGKADRALAIF 428
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECR 175
+M +GV P+ VTL V+S+ H G + E R
Sbjct: 429 SEMPRMGVRPDHVTLVGVLSACSHAGLLEEGR 460
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 66/309 (21%), Positives = 129/309 (41%), Gaps = 31/309 (10%)
Query: 293 LISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDH 352
L+S+C + E QIH+ I+KA T + + C +I + LQ ++ + D
Sbjct: 32 LLSSCK---SVREIKQIHASIIKANTT----RSTTTLPIISLCTKIT-SLLQQDVHLADS 83
Query: 353 IAS-WNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYA-QNEQPNMALELFHGM 410
I + W A L N + VY ++A+I + N L+ M
Sbjct: 84 IQNLWYA--------------SSLANFCHQNPVYIFNAIIQSLSTSNNTFTHIFSLYRQM 129
Query: 411 VDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSI 470
+ G+ P+ T+ + A + S E H + + ++ N + ++ YA G I
Sbjct: 130 LLIGLSPDTYTLPYLLKACSQSHAFIEALQIHAHSIKTGLSSNLFVKNTLMRFYAVSGFI 189
Query: 471 NTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLS 530
+VF + + W +I + G + + + + N + +T + VLS
Sbjct: 190 EAVEKVF--DQGPHWDLISWTTLIQAYSKMGYPSEAIAAFF---RMNCTADRMTLVVVLS 244
Query: 531 TCCHAGLVDLGERYFKSM-KSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKAD 589
C G LG++ M +++V D+ ++D+ + GQ A ++ MP+K +
Sbjct: 245 ACSQLGDFTLGKKILAYMDHHLFDVHSDVFLGNALLDMYLKCGQPHLARQLFHLMPVK-N 303
Query: 590 VVIWGTLLA 598
+V W ++++
Sbjct: 304 LVSWNSMIS 312
>gi|225451435|ref|XP_002273841.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Vitis vinifera]
Length = 474
Score = 299 bits (765), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 168/435 (38%), Positives = 241/435 (55%), Gaps = 33/435 (7%)
Query: 230 GFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVM 289
+++G + A LF + W T+I + SEAL +Y M + P
Sbjct: 69 ALSESGDLSYALRLFNNTQEPNSFMWNTLIRAHASSLNPSEALLLYVDMRRLDVIPGKHT 128
Query: 290 IVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGI 349
L+ AC + +Q+H+ ++K G D +NL
Sbjct: 129 FPFLLKACSNFQSLQSCIQVHTHVLKFGLD------------------LNL--------- 161
Query: 350 KDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHG 409
H+ N L+ + + + +AR++F+ + +R + W+ MISGYAQN N ALELF
Sbjct: 162 --HVV--NGLVRAYSVSCDVRNARRVFDEVSERSLSIWTTMISGYAQNYCSNEALELFDQ 217
Query: 410 MVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGS 469
M+ G++PN T+ SV A A SG L G H ++ I + L A++ MYAK G+
Sbjct: 218 MIVEGLEPNGATLASVLSACAQSGCLDLGERIHVFMEEKGIEVGVILGTALVHMYAKNGA 277
Query: 470 INTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVL 529
I A ++F I +R T+ WNA+ICGLA+HG A L + LEK I N ITF+GVL
Sbjct: 278 ILMAQKLFDTISERNTAT--WNAMICGLAVHGHAKEALDRFWKLEKEQIVPNDITFVGVL 335
Query: 530 STCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKAD 589
S CCHAGL+ +G + F MK VY +EP ++HYGCMVDLLGR G+L +AEE+I+ M KAD
Sbjct: 336 SACCHAGLLSVGRKIFHLMKRVYGIEPKIEHYGCMVDLLGRGGELLEAEELIKGMAWKAD 395
Query: 590 VVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKE 649
VVI G LL + + HGN+E+ ER K + L+P + V+LSN+YA+AGRWED +RK
Sbjct: 396 VVILGALLGSCKNHGNIEIAERVVKEILVLEPHNHGVYVVLSNMYAEAGRWEDVLRLRKV 455
Query: 650 MRDCGMKRLPGFSGV 664
M+ +K+ PG+S V
Sbjct: 456 MKSGNLKKTPGWSLV 470
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 129/286 (45%), Gaps = 62/286 (21%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
L+ CS ++ Q+H+ + K GL+ N + N L+ Y+
Sbjct: 133 LKACSNFQSLQSCIQVHTHVLKFGLDLNLHVVNGLVRAYS-------------------- 172
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
V+C++ +AR VFD+ + +T+MI G+AQN C EALE+F M +
Sbjct: 173 VSCDV-----------RNARRVFDEVSERSLSIWTTMISGYAQNYCSNEALELFDQMIVE 221
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
G+ PN TLASV+S+ G + +H + + I+ VI+ T L++MY +++ A
Sbjct: 222 GLEPNGATLASVLSACAQSGCLDLGERIHVFMEEKGIEVGVILGTALVHMYAKNGAILMA 281
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLS 269
+ LFD + ERN +WN M+ G A G + A + F ++ + +V
Sbjct: 282 QKLFDTISERNTATWNAMICGLAVHGHAKEALDRFWKLEKEQIV---------------- 325
Query: 270 EALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVK 315
PND+ V ++SAC A G +I ++ +
Sbjct: 326 ---------------PNDITFVGVLSACCHAGLLSVGRKIFHLMKR 356
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 139/335 (41%), Gaps = 62/335 (18%)
Query: 105 LNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISS 164
L+ A +F+ T + ++I A + EAL ++ DMR L VIP + T ++ +
Sbjct: 76 LSYALRLFNNTQEPNSFMWNTLIRAHASSLNPSEALLLYVDMRRLDVIPGKHTFPFLLKA 135
Query: 165 SVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSW 224
+ + C +H V+K +D + + L+ Y V + AR +FDE+ E
Sbjct: 136 CSNFQSLQSCIQVHTHVLKFGLDLNLHVVNGLVRAYSVSCDVRNARRVFDEVSE------ 189
Query: 225 NVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIA 284
+ + W TMI GY Q +EAL ++ M+ +G+
Sbjct: 190 -------------------------RSLSIWTTMISGYAQNYCSNEALELFDQMIVEGLE 224
Query: 285 PNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQ 344
PN + ++SAC ++ G +IH + + G + + ++H YA G I +A+
Sbjct: 225 PNGATLASVLSACAQSGCLDLGERIHVFMEEKGIEVGVILGTALVHMYAKNGAILMAQKL 284
Query: 345 FELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMAL 404
F+ + + A+WNA+I G +G ++A F ++K +
Sbjct: 285 FDTISERNTATWNAMICGLAVHGHAKEALDRFWKLEKEQIV------------------- 325
Query: 405 ELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGR 439
PN+IT V V A +G L GR
Sbjct: 326 ------------PNDITFVGVLSACCHAGLLSVGR 348
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 111/259 (42%), Gaps = 36/259 (13%)
Query: 25 ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSC 84
L S L C+ + G++IH + + G+E + +L+++YAK G I A+ +FD+
Sbjct: 229 TLASVLSACAQSGCLDLGERIHVFMEEKGIEVGVILGTALVHMYAKNGAILMAQKLFDTI 288
Query: 85 STLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFR 144
S RN ++ +MI G A + +EAL+ F
Sbjct: 289 SE--------------RNT-----------------ATWNAMICGLAVHGHAKEALDRFW 317
Query: 145 DMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLM-IDGFVIISTNLLNMYCVC 203
+ ++PN++T V+S+ H G + R + L+ ++ I+ + ++++
Sbjct: 318 KLEKEQIVPNDITFVGVLSACCHAGLLSVGRKIFHLMKRVYGIEPKIEHYGCMVDLLGRG 377
Query: 204 SSLVEARSLFDEMK-ERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMI--- 259
L+EA L M + ++V +L G +E+A + + I + + G +
Sbjct: 378 GELLEAEELIKGMAWKADVVILGALLGSCKNHGNIEIAERVVKEILVLEPHNHGVYVVLS 437
Query: 260 DGYLQVERLSEALTMYRAM 278
+ Y + R + L + + M
Sbjct: 438 NMYAEAGRWEDVLRLRKVM 456
>gi|224119830|ref|XP_002318172.1| predicted protein [Populus trichocarpa]
gi|222858845|gb|EEE96392.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 299 bits (765), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 189/626 (30%), Positives = 319/626 (50%), Gaps = 77/626 (12%)
Query: 45 IHSLIFKSGLESNTFIQNSLINLYAKC---GLISQAKSMFDSCSTLDPVACNIMISGYIR 101
+ +L F++ E + + L++L +C L+ Q + S P N ++S I
Sbjct: 17 LSNLNFQTQKEHHQTLTEKLLSLIKQCKSKNLLKQIHAQMLINSIPKP---NFLLSKIID 73
Query: 102 NDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWRE---ALEVFRDMRILGVIPNEVTL 158
L A VF++ ++ M+ G A W++ +E++ ++ LG+ N T
Sbjct: 74 LKDLAYASLVFNQLTKPNIYAFNVMLRGLATT--WKKYDFCVELYYKLKSLGLKANNFTY 131
Query: 159 ASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKE 218
+ + ++ G+ ++ H LV K +DG ++ +L+ MY C +
Sbjct: 132 PFLFIACGNVRGLVHGKIGHCLVFKAGLDGDEYVNHSLITMYARCGEM------------ 179
Query: 219 RNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAM 278
GFA R++F+ + +D+VSW +MI GY ++ EA+ ++ M
Sbjct: 180 -----------GFA--------RKVFDEMGDRDLVSWNSMISGYSKMGFTKEAIGLFMEM 220
Query: 279 LCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRI 338
+G P+++ +V ++ ACG G G + +++ + ++ + +I Y CG
Sbjct: 221 REEGFEPDEMTLVSVLGACGDLGDLGLGRWVEGFVLEKKMEVNSYMGSALIDMYGKCG-- 278
Query: 339 NLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNE 398
D I+ AR++F++M +DV +W+A+I+GYAQN
Sbjct: 279 ------------DLIS-----------------ARRVFDSMPNKDVVTWNAIITGYAQNG 309
Query: 399 QPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSA 458
N A+ LF+GM +AG P+ +TM+ V A ++ G L G+W + + + +++
Sbjct: 310 ASNEAIVLFNGMREAGPHPDRVTMIEVLSACSTIGALDLGKWVETHASEKGLQHDVYVAS 369
Query: 459 AIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRN- 517
A+IDMYAKCGS++ A VF + + VS WNA+I LA HG A L ++ + K N
Sbjct: 370 ALIDMYAKCGSLDDAVRVFESMPHKN-EVS-WNAMISALAFHGQAQEALSLFRRMSKDNG 427
Query: 518 -IKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLED 576
++ N ITFIGVLS C HAGLVD G + F+SM + + P ++HY CMVDL RAG L +
Sbjct: 428 TVQPNDITFIGVLSACVHAGLVDEGRQLFESMNLSFGLVPKVEHYSCMVDLCARAGLLYE 487
Query: 577 AEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYAD 636
A ++I+ MP K D ++ G+LL A + N +VGER + ++ S+ + V+ S IYA+
Sbjct: 488 AWDLIKKMPGKPDEIVLGSLLGACQRRRNADVGERVIQLFLEMELSNSGNYVISSKIYAN 547
Query: 637 AGRWEDAFSIRKEMRDCGMKRLPGFS 662
RW+D+ +R MR CG+ + PG S
Sbjct: 548 MRRWDDSAKMRVLMRQCGVSKTPGCS 573
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 128/287 (44%), Gaps = 60/287 (20%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E+ LVS L C + G+ + + + +E N+++ ++LI++Y KCG + A+ +FD
Sbjct: 229 EMTLVSVLGACGDLGDLGLGRWVEGFVLEKKMEVNSYMGSALIDMYGKCGDLISARRVFD 288
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
S D V N +I+GY AQN EA+ +
Sbjct: 289 SMPNKDVVTWNAIITGY-------------------------------AQNGASNEAIVL 317
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
F MR G P+ VT+ V+S+ +G + + + + + V +++ L++MY
Sbjct: 318 FNGMREAGPHPDRVTMIEVLSACSTIGALDLGKWVETHASEKGLQHDVYVASALIDMYAK 377
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
C SL +A +F+ M +N VSWN M++ A G + A LF R+ SKD +G
Sbjct: 378 CGSLDDAVRVFESMPHKNEVSWNAMISALAFHGQAQEALSLFRRM-SKD--------NGT 428
Query: 263 LQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQI 309
+Q PND+ + ++SAC A EG Q+
Sbjct: 429 VQ--------------------PNDITFIGVLSACVHAGLVDEGRQL 455
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 110/259 (42%), Gaps = 75/259 (28%)
Query: 9 VFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLY 68
+FN + + D + ++ L CS A+ G+ + + + GL+ + ++ ++LI++Y
Sbjct: 317 LFNGMREAGPHPD-RVTMIEVLSACSTIGALDLGKWVETHASEKGLQHDVYVASALIDMY 375
Query: 69 AKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIM 128
AKCG + A +F+S P K VS+ +MI
Sbjct: 376 AKCGSLDDAVRVFES-------------------------------MPHKNEVSWNAMIS 404
Query: 129 GFAQNDCWREALEVFRDM-RILGVI-PNEVTLASVISSSVHLGGIWECRMLHGLVIKLMI 186
A + +EAL +FR M + G + PN++T V+S+ VH G ++
Sbjct: 405 ALAFHGQAQEALSLFRRMSKDNGTVQPNDITFIGVLSACVHAG---------------LV 449
Query: 187 DGFVIISTNLLNMYCVCSSLVEARSLFDEMKER-----NIVSWNVMLNGFAKAGLVELAR 241
D E R LF+ M + ++ M++ A+AGL+ A
Sbjct: 450 D--------------------EGRQLFESMNLSFGLVPKVEHYSCMVDLCARAGLLYEAW 489
Query: 242 ELFERIPSK-DVVSWGTMI 259
+L +++P K D + G+++
Sbjct: 490 DLIKKMPGKPDEIVLGSLL 508
>gi|356557599|ref|XP_003547103.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31070,
mitochondrial-like [Glycine max]
Length = 601
Score = 299 bits (765), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 189/648 (29%), Positives = 310/648 (47%), Gaps = 97/648 (14%)
Query: 19 NSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAK 78
+S L S ++ S+ + G Q+H L K+G S T + NS+I +Y K
Sbjct: 47 HSSISFFLPSVIKASSSAQCHTFGTQLHCLALKTGSHSETVVSNSIITMYFK-------- 98
Query: 79 SMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWRE 138
+ AR+VFD P + +++ S+I G+ N E
Sbjct: 99 -----------------------FSDVGSARQVFDTMPHRDPITWNSLINGYLHNGYLEE 135
Query: 139 ALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVI-KLMIDGFVIISTNLL 197
ALE D+ +LG++P LASV+S G R +H LV+ I + +ST L+
Sbjct: 136 ALEALNDVYLLGLVPKPELLASVVSMCGRRMGSKIGRQIHALVVVNERIGQSMFLSTALV 195
Query: 198 NMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGT 257
+ Y C + A +FD M+ +N VVSW T
Sbjct: 196 DFYFRCGDSLMALRVFDGMEVKN-------------------------------VVSWTT 224
Query: 258 MIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAG 317
MI G + + EA +RAM +G+ PN V + L+SAC G +IH + G
Sbjct: 225 MISGCIAHQDYDEAFACFRAMQAEGVCPNRVTSIALLSACAEPGFVKHGKEIHGYAFRHG 284
Query: 318 FDCYDFIQATIIHFYAACGR-INLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLF 376
F+ + +++ Y CG ++LA L FE
Sbjct: 285 FESCPSFSSALVNMYCQCGEPMHLAELIFE------------------------------ 314
Query: 377 NNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLK 436
RDV WS++I +++ AL+LF+ M ++PN +T+++V A + +LK
Sbjct: 315 -GSSFRDVVLWSSIIGSFSRRGDSFKALKLFNKMRTEEIEPNYVTLLAVISACTNLSSLK 373
Query: 437 EGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICG 496
G H Y+ + ++ A+I+MYAKCG +N + ++F + +R W+++I
Sbjct: 374 HGCGLHGYIFKFGFCFSISVGNALINMYAKCGCLNGSRKMFLEMPNRDNVT--WSSLISA 431
Query: 497 LAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEP 556
+HG L+I+ ++ +R +K ++ITF+ VLS C HAGLV G+R FK +++ +
Sbjct: 432 YGLHGCGEQALQIFYEMNERGVKPDAITFLAVLSACNHAGLVAEGQRIFKQVRADCEIPL 491
Query: 557 DLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSL 616
++HY C+VDLLGR+G+LE A E+ R+MPMK IW +L++A ++HG +++ E A L
Sbjct: 492 TIEHYACLVDLLGRSGKLEYALEIRRTMPMKPSARIWSSLVSACKLHGRLDIAEMLAPQL 551
Query: 617 AGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
+P++ + LL+ IYA+ G W D +R+ M+ +K+ GFS +
Sbjct: 552 IRSEPNNAGNYTLLNTIYAEHGHWLDTEQVREAMKLQKLKKCYGFSRI 599
>gi|147769957|emb|CAN70049.1| hypothetical protein VITISV_013371 [Vitis vinifera]
Length = 476
Score = 299 bits (765), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 168/435 (38%), Positives = 241/435 (55%), Gaps = 33/435 (7%)
Query: 230 GFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVM 289
+++G + A LF + W T+I + SEAL +Y M + P
Sbjct: 71 ALSESGDLSYALRLFNNTQEPNSFMWNTLIRAHASSLNPSEALLLYVDMRRLDVIPGKHT 130
Query: 290 IVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGI 349
L+ AC + +Q+H+ ++K G D +NL
Sbjct: 131 FPFLLKACSNFQSLQSCIQVHTHVLKFGLD------------------LNL--------- 163
Query: 350 KDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHG 409
H+ N L+ + + + +AR++F+ + +R + W+ MISGYAQN N ALELF
Sbjct: 164 --HVV--NGLVRAYSVSCDVRNARRVFDEVSERSLSIWTTMISGYAQNYCSNEALELFDQ 219
Query: 410 MVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGS 469
M+ G++PN T+ SV A A SG L G H ++ I + L A++ MYAK G+
Sbjct: 220 MIVEGLEPNGATLASVLSACAQSGCLDLGERIHVFMEEKGIEVGVILGTALVHMYAKNGA 279
Query: 470 INTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVL 529
I A ++F I +R T+ WNA+ICGLA+HG A L + LEK I N ITF+GVL
Sbjct: 280 ILMAQKLFDXISERNTAT--WNAMICGLAVHGHAKEALDRFWKLEKEQIVPNDITFVGVL 337
Query: 530 STCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKAD 589
S CCHAGL+ +G + F MK VY +EP ++HYGCMVDLLGR G+L +AEE+I+ M KAD
Sbjct: 338 SACCHAGLLSVGRKIFHLMKRVYGIEPKIEHYGCMVDLLGRGGELLEAEELIKGMAWKAD 397
Query: 590 VVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKE 649
VVI G LL + + HGN+E+ ER K + L+P + V+LSN+YA+AGRWED +RK
Sbjct: 398 VVILGALLGSCKNHGNIEIAERVVKEILVLEPHNHGVYVVLSNMYAEAGRWEDVLRLRKV 457
Query: 650 MRDCGMKRLPGFSGV 664
M+ +K+ PG+S V
Sbjct: 458 MKSGNLKKTPGWSLV 472
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 129/286 (45%), Gaps = 62/286 (21%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
L+ CS ++ Q+H+ + K GL+ N + N L+ Y+
Sbjct: 135 LKACSNFQSLQSCIQVHTHVLKFGLDLNLHVVNGLVRAYS-------------------- 174
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
V+C++ +AR VFD+ + +T+MI G+AQN C EALE+F M +
Sbjct: 175 VSCDV-----------RNARRVFDEVSERSLSIWTTMISGYAQNYCSNEALELFDQMIVE 223
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
G+ PN TLASV+S+ G + +H + + I+ VI+ T L++MY +++ A
Sbjct: 224 GLEPNGATLASVLSACAQSGCLDLGERIHVFMEEKGIEVGVILGTALVHMYAKNGAILMA 283
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLS 269
+ LFD + ERN +WN M+ G A G + A + F ++ + +V
Sbjct: 284 QKLFDXISERNTATWNAMICGLAVHGHAKEALDRFWKLEKEQIV---------------- 327
Query: 270 EALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVK 315
PND+ V ++SAC A G +I ++ +
Sbjct: 328 ---------------PNDITFVGVLSACCHAGLLSVGRKIFHLMKR 358
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 139/335 (41%), Gaps = 62/335 (18%)
Query: 105 LNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISS 164
L+ A +F+ T + ++I A + EAL ++ DMR L VIP + T ++ +
Sbjct: 78 LSYALRLFNNTQEPNSFMWNTLIRAHASSLNPSEALLLYVDMRRLDVIPGKHTFPFLLKA 137
Query: 165 SVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSW 224
+ + C +H V+K +D + + L+ Y V + AR +FDE+ E
Sbjct: 138 CSNFQSLQSCIQVHTHVLKFGLDLNLHVVNGLVRAYSVSCDVRNARRVFDEVSE------ 191
Query: 225 NVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIA 284
+ + W TMI GY Q +EAL ++ M+ +G+
Sbjct: 192 -------------------------RSLSIWTTMISGYAQNYCSNEALELFDQMIVEGLE 226
Query: 285 PNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQ 344
PN + ++SAC ++ G +IH + + G + + ++H YA G I +A+
Sbjct: 227 PNGATLASVLSACAQSGCLDLGERIHVFMEEKGIEVGVILGTALVHMYAKNGAILMAQKL 286
Query: 345 FELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMAL 404
F+ + + A+WNA+I G +G ++A F ++K +
Sbjct: 287 FDXISERNTATWNAMICGLAVHGHAKEALDRFWKLEKEQIV------------------- 327
Query: 405 ELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGR 439
PN+IT V V A +G L GR
Sbjct: 328 ------------PNDITFVGVLSACCHAGLLSVGR 350
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 110/259 (42%), Gaps = 36/259 (13%)
Query: 25 ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSC 84
L S L C+ + G++IH + + G+E + +L+++YAK G I A+ +FD
Sbjct: 231 TLASVLSACAQSGCLDLGERIHVFMEEKGIEVGVILGTALVHMYAKNGAILMAQKLFDXI 290
Query: 85 STLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFR 144
S RN ++ +MI G A + +EAL+ F
Sbjct: 291 SE--------------RNT-----------------ATWNAMICGLAVHGHAKEALDRFW 319
Query: 145 DMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLM-IDGFVIISTNLLNMYCVC 203
+ ++PN++T V+S+ H G + R + L+ ++ I+ + ++++
Sbjct: 320 KLEKEQIVPNDITFVGVLSACCHAGLLSVGRKIFHLMKRVYGIEPKIEHYGCMVDLLGRG 379
Query: 204 SSLVEARSLFDEMK-ERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMI--- 259
L+EA L M + ++V +L G +E+A + + I + + G +
Sbjct: 380 GELLEAEELIKGMAWKADVVILGALLGSCKNHGNIEIAERVVKEILVLEPHNHGVYVVLS 439
Query: 260 DGYLQVERLSEALTMYRAM 278
+ Y + R + L + + M
Sbjct: 440 NMYAEAGRWEDVLRLRKVM 458
>gi|297828249|ref|XP_002882007.1| hypothetical protein ARALYDRAFT_483672 [Arabidopsis lyrata subsp.
lyrata]
gi|297327846|gb|EFH58266.1| hypothetical protein ARALYDRAFT_483672 [Arabidopsis lyrata subsp.
lyrata]
Length = 606
Score = 299 bits (765), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 185/530 (34%), Positives = 288/530 (54%), Gaps = 45/530 (8%)
Query: 137 REALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNL 196
R+AL +F M GV ++ +L+ V+ + LG + +HG + K + + + L
Sbjct: 96 RQALLLFCLMLENGVSVDKFSLSLVLKACSRLGFVKGGMQIHGFLRKTGLWSDLFLQNCL 155
Query: 197 LNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPS--KDVVS 254
+ +Y C L AR +FD M +R+ VS+N M+NG+ K GL+E ARELF+ +P K+++S
Sbjct: 156 IGLYLKCGCLGFARQMFDRMPQRDSVSYNSMINGYVKCGLIESARELFDLMPREMKNLIS 215
Query: 255 WGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIV 314
W +MI GY Q SE + + + + P DLIS
Sbjct: 216 WNSMISGYAQT---SEGVNIASKLFAE--MPEK----DLIS------------------- 247
Query: 315 KAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQ 374
++I Y GRI A+ F++ + + + +I G+ + G + A+
Sbjct: 248 ----------WNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTCATMIDGYAKLGFVHQAKT 297
Query: 375 LFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGM-VDAGVKPNEITMVSVFCAIASSG 433
LF+ M RDV ++++M++GY QN+ ALE+F+ M ++ + P+E T+V + AIA G
Sbjct: 298 LFDQMPLRDVVAYNSMMAGYVQNKCHMEALEIFNDMEKESHLSPDETTLVIILSAIAQLG 357
Query: 434 TLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAI 493
L + H Y++ L L A+IDMY+KCGSI A VF I ++ S+ WNA+
Sbjct: 358 RLSKATDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENK--SIDHWNAM 415
Query: 494 ICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYN 553
I GLA+HG + +E+ +I + ITF+GVL+ C H+GLV G F+ M+ +
Sbjct: 416 IGGLAVHGLGESAFNMLLQIERLSIIPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHK 475
Query: 554 VEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAA 613
+EP L+HYGCMVD+L R+G +E A+ +I MP++ + VIW T L A H E GE A
Sbjct: 476 IEPRLQHYGCMVDILSRSGSIELAKNLIEEMPIEPNDVIWRTFLTACSHHKEFETGELVA 535
Query: 614 KSLAGLQPSHGPSR-VLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
K L LQ + PS VLLSN+YA G W+D +R M++ ++++PG S
Sbjct: 536 KHLI-LQAGYNPSSYVLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGCS 584
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 134/457 (29%), Positives = 216/457 (47%), Gaps = 77/457 (16%)
Query: 22 YELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMF 81
+ L+LV L+ CS V G QIH + K+GL S+ F+QN LI LY KCG + A+ MF
Sbjct: 115 FSLSLV--LKACSRLGFVKGGMQIHGFLRKTGLWSDLFLQNCLIGLYLKCGCLGFARQMF 172
Query: 82 DSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTP--IKCCVSYTSMIMGFAQNDCWREA 139
D D V+ N MI+GY++ + ARE+FD P +K +S+ SMI G+AQ
Sbjct: 173 DRMPQRDSVSYNSMINGYVKCGLIESARELFDLMPREMKNLISWNSMISGYAQTS----- 227
Query: 140 LEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNM 199
+ I + E+ +IS W MIDG+V
Sbjct: 228 ----EGVNIASKLFAEMPEKDLIS--------WNS----------MIDGYV--------- 256
Query: 200 YCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMI 259
+ +A+ LFD M R++V+ M++G+AK G V A+ LF+++P +DVV++ +M+
Sbjct: 257 --KHGRIEDAKGLFDVMPRRDVVTCATMIDGYAKLGFVHQAKTLFDQMPLRDVVAYNSMM 314
Query: 260 DGYLQVERLSEALTMYRAMLCDG-IAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGF 318
GY+Q + EAL ++ M + ++P++ +V ++SA + + +H IV+ F
Sbjct: 315 AGYVQNKCHMEALEIFNDMEKESHLSPDETTLVIILSAIAQLGRLSKATDMHLYIVEKQF 374
Query: 319 DCYDFIQATIIHFYAACGRINLARLQFELGIKDH-IASWNALIAGFIRNGMIEDARQLFN 377
+ +I Y+ CG I A L FE GI++ I WNA+I G +G+ E A +
Sbjct: 375 YLGGKLGVALIDMYSKCGSIQHAMLVFE-GIENKSIDHWNAMIGGLAVHGLGESAFNMLL 433
Query: 378 NMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKE 437
+++ + P++IT V V A + SG +KE
Sbjct: 434 QIERLSII-------------------------------PDDITFVGVLNACSHSGLVKE 462
Query: 438 GRWAHEYV-LNNSITLNDNLSAAIIDMYAKCGSINTA 473
G E + + I ++D+ ++ GSI A
Sbjct: 463 GLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELA 499
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 111/418 (26%), Positives = 187/418 (44%), Gaps = 68/418 (16%)
Query: 26 LVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCS 85
L+S S + S+G I S +F E + NS+I+ Y K G I AK +FD
Sbjct: 213 LISWNSMISGYAQTSEGVNIASKLFAEMPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMP 272
Query: 86 TLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRD 145
D V C MI GY + ++ A+ +FD+ P++ V+Y SM+ G+ QN C EALE+F D
Sbjct: 273 RRDVVTCATMIDGYAKLGFVHQAKTLFDQMPLRDVVAYNSMMAGYVQNKCHMEALEIFND 332
Query: 146 M-RILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCS 204
M + + P+E TL ++S+ LG + + +H +++ + L++MY C
Sbjct: 333 MEKESHLSPDETTLVIILSAIAQLGRLSKATDMHLYIVEKQFYLGGKLGVALIDMYSKCG 392
Query: 205 SLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQ 264
S+ A +F+ ++ ++I WN M+ G A GL E A + LQ
Sbjct: 393 SIQHAMLVFEGIENKSIDHWNAMIGGLAVHGLGESAFNML------------------LQ 434
Query: 265 VERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFI 324
+ERLS I P+D+ V +++AC HS +VK G C++ +
Sbjct: 435 IERLS-------------IIPDDITFVGVLNACS-----------HSGLVKEGLLCFELM 470
Query: 325 QATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNM--QKR 382
+ + I+ + + ++ R+G IE A+ L M +
Sbjct: 471 RR-------------------KHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPIEPN 511
Query: 383 DVYSWSAMISGYAQNEQPNMA-LELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGR 439
DV W ++ + +++ L H ++ AG P+ ++S AS G K+ R
Sbjct: 512 DVI-WRTFLTACSHHKEFETGELVAKHLILQAGYNPSSYVLLSNM--YASFGMWKDVR 566
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 101/380 (26%), Positives = 184/380 (48%), Gaps = 29/380 (7%)
Query: 250 KDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQI 309
+D W +I + + +AL ++ ML +G++ + + ++ AC R G+QI
Sbjct: 77 EDPFLWNAVIKSHSHGKDPRQALLLFCLMLENGVSVDKFSLSLVLKACSRLGFVKGGMQI 136
Query: 310 HSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMI 369
H + K G F+Q +I Y CG + AR F+ + S+N++I G+++ G+I
Sbjct: 137 HGFLRKTGLWSDLFLQNCLIGLYLKCGCLGFARQMFDRMPQRDSVSYNSMINGYVKCGLI 196
Query: 370 EDARQLFNNMQK--RDVYSWSAMISGYAQ-NEQPNMALELFHGMVDAGVKPNEITMVSVF 426
E AR+LF+ M + +++ SW++MISGYAQ +E N+A +LF M E ++S
Sbjct: 197 ESARELFDLMPREMKNLISWNSMISGYAQTSEGVNIASKLFAEM-------PEKDLISWN 249
Query: 427 CAIASSGTLKEGRWAHEYVLNNSITLNDNLS-AAIIDMYAKCGSINTAFEVFYHIRDRTT 485
I G +K GR L + + D ++ A +ID YAK G ++ A +F + R
Sbjct: 250 SMI--DGYVKHGRIEDAKGLFDVMPRRDVVTCATMIDGYAKLGFVHQAKTLFDQMPLR-- 305
Query: 486 SVSPWNAIICGLAMHGDANLTLKIYSDLEKR-NIKLNSITFIGVLSTCCHAGLVDLGERY 544
V +N+++ G + L+I++D+EK ++ + T + +LS + LG
Sbjct: 306 DVVAYNSMMAGYVQNKCHMEALEIFNDMEKESHLSPDETTLVIILS-----AIAQLGRLS 360
Query: 545 FKSMKSVYNVEPDLKHYG----CMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAAS 600
+ +Y VE G ++D+ + G ++ A V + K+ + W ++
Sbjct: 361 KATDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKS-IDHWNAMIGGL 419
Query: 601 RIHGNVEVGERAAKSLAGLQ 620
+HG +GE A L ++
Sbjct: 420 AVHG---LGESAFNMLLQIE 436
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 117/245 (47%), Gaps = 11/245 (4%)
Query: 354 ASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDA 413
AS +A F R E F+ + D + W+A+I ++ + P AL LF M++
Sbjct: 49 ASRRPYLAEFARCVFHEYHVCSFSPGEMEDPFLWNAVIKSHSHGKDPRQALLLFCLMLEN 108
Query: 414 GVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTA 473
GV ++ ++ V A + G +K G H ++ + + L +I +Y KCG + A
Sbjct: 109 GVSVDKFSLSLVLKACSRLGFVKGGMQIHGFLRKTGLWSDLFLQNCLIGLYLKCGCLGFA 168
Query: 474 FEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCC 533
++F + R SVS +N++I G G +++ DL R +K N I++ ++S
Sbjct: 169 RQMFDRMPQR-DSVS-YNSMINGYVKCGLIESARELF-DLMPREMK-NLISWNSMISGYA 224
Query: 534 HAGL-VDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVI 592
V++ + F M E DL + M+D + G++EDA+ + MP + DVV
Sbjct: 225 QTSEGVNIASKLFAEMP-----EKDLISWNSMIDGYVKHGRIEDAKGLFDVMP-RRDVVT 278
Query: 593 WGTLL 597
T++
Sbjct: 279 CATMI 283
>gi|222635654|gb|EEE65786.1| hypothetical protein OsJ_21486 [Oryza sativa Japonica Group]
Length = 749
Score = 298 bits (764), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 191/643 (29%), Positives = 310/643 (48%), Gaps = 95/643 (14%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
+ AL SA+R C+ V G+Q+H+ KS S+ +QN+L+ +Y+K GL+
Sbjct: 135 QFALGSAVRACTELGDVGTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLV-------- 186
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+D +F++ K +S+ S+I GFAQ EAL+V
Sbjct: 187 -----------------------DDGFMLFERIKDKDLISWGSIIAGFAQQGFEMEALQV 223
Query: 143 FRDMRILGVI-PNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYC 201
FR+M + G PNE S + +G +HGL IK +D + + +L +MY
Sbjct: 224 FREMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLDRDLYVGCSLSDMYA 283
Query: 202 VCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDG 261
C +L + AR F RI + D+VSW ++++
Sbjct: 284 RCKNL-------------------------------DSARVAFYRIEAPDLVSWNSIVNA 312
Query: 262 YLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCY 321
Y LSEAL ++ M G+ P+ + + L+ AC A G IHS +VK
Sbjct: 313 YSVEGLLSEALVLFSEMRDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVK------ 366
Query: 322 DFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQK 381
LG+ ++ N+L++ + R + A +F+ ++
Sbjct: 367 -------------------------LGLDGDVSVCNSLLSMYARCSDLSSAMDVFHEIKD 401
Query: 382 RDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWA 441
+DV +W+++++ AQ+ P L+LF + + + I++ +V A A G + +
Sbjct: 402 QDVVTWNSILTACAQHNHPEEVLKLFSLLNKSEPSLDRISLNNVLSASAELGYFEMVKQV 461
Query: 442 HEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHG 501
H Y + + LS +ID YAKCGS++ A +F I V W+++I G A G
Sbjct: 462 HAYAFKAGLVDDRMLSNTLIDTYAKCGSLDDAMRLF-EIMGNNRDVFSWSSLIVGYAQFG 520
Query: 502 DANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHY 561
A ++S + I+ N +TFIGVL+ C G V+ G Y+ M+ Y + P +H
Sbjct: 521 YAKEAFDLFSRMRSLGIRPNHVTFIGVLTACSRVGFVNEGCYYYSIMEPEYGIVPTREHC 580
Query: 562 GCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQP 621
C+VDLL RAG+L +A I MP + D+++W TLLAAS++H ++E+G+RAA+ + + P
Sbjct: 581 SCIVDLLARAGKLTEAANFIDQMPFEPDIIMWKTLLAASKMHNDMEMGKRAAEGILNIDP 640
Query: 622 SHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
SH + VLL NIYA +G W + ++K MR G+K+ PG S V
Sbjct: 641 SHSAAYVLLCNIYAASGNWNEFARLKKAMRTSGVKKSPGKSWV 683
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 87/384 (22%), Positives = 164/384 (42%), Gaps = 36/384 (9%)
Query: 250 KDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQI 309
++ VSW ++I ++Q R +AL ++ +ML G A + + + AC G G Q+
Sbjct: 98 RNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELGDVGTGRQV 157
Query: 310 HSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMI 369
H+ +K+ +Q ++ Y+ G ++ + FE + SW ++IAGF + G
Sbjct: 158 HAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDKDLISWGSIIAGFAQQGFE 217
Query: 370 EDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAI 429
+A Q+F M +V+ PNE S F A
Sbjct: 218 MEALQVFREM------------------------------IVEGSHHPNEFHFGSAFRAC 247
Query: 430 ASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSP 489
+ G+ + G H + + + + ++ DMYA+C ++++A FY I +
Sbjct: 248 GAVGSWEYGEQIHGLSIKYRLDRDLYVGCSLSDMYARCKNLDSARVAFYRI--EAPDLVS 305
Query: 490 WNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMK 549
WN+I+ ++ G + L ++S++ ++ + IT G+L C + G R S
Sbjct: 306 WNSIVNAYSVEGLLSEALVLFSEMRDSGLRPDGITVRGLLCACVGRDALYHG-RLIHSYL 364
Query: 550 SVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVG 609
++ D+ ++ + R L A +V + DVV W ++L A H + E
Sbjct: 365 VKLGLDGDVSVCNSLLSMYARCSDLSSAMDVFHEIK-DQDVVTWNSILTACAQHNHPEEV 423
Query: 610 ERAAKSLAGLQPSHGPSRVLLSNI 633
+ L +PS R+ L+N+
Sbjct: 424 LKLFSLLNKSEPS--LDRISLNNV 445
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 105/229 (45%), Gaps = 7/229 (3%)
Query: 378 NMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKE 437
M R+ SW+++I+ + QN + AL LF M+ +G ++ + S A G +
Sbjct: 94 TMYGRNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTELGDVGT 153
Query: 438 GRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGL 497
GR H + L + + + A++ MY+K G ++ F +F I+D+ + W +II G
Sbjct: 154 GRQVHAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDK--DLISWGSIIAGF 211
Query: 498 AMHGDANLTLKIYSDL-EKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEP 556
A G L+++ ++ + + N F C G + GE+ + Y ++
Sbjct: 212 AQQGFEMEALQVFREMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQ-IHGLSIKYRLDR 270
Query: 557 DLKHYGC-MVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHG 604
DL + GC + D+ R L+ A + D+V W +++ A + G
Sbjct: 271 DL-YVGCSLSDMYARCKNLDSARVAFYRIE-APDLVSWNSIVNAYSVEG 317
>gi|326518042|dbj|BAK07273.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 527
Score = 298 bits (764), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 177/550 (32%), Positives = 291/550 (52%), Gaps = 42/550 (7%)
Query: 116 PIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECR 175
P++ C +I A+ + + V+ D+R G++ + T V+ + L E R
Sbjct: 10 PLREC---NLLIRTLARRSSHADVMAVYYDLRERGLVADSFTYPFVLRAIGALQISVEGR 66
Query: 176 MLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAG 235
H +K +++L++MY ML G
Sbjct: 67 KAHAATLKTGFRWDAYTASSLMDMY-------------------------TML------G 95
Query: 236 LVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLIS 295
+E AR++F+ +P + VV W M+ Y++ R +EA+ + M + P+ V ++ ++
Sbjct: 96 RLEAARKVFDEMPQRAVVVWNMMLRCYVRCGRNTEAVALAEEMERGRLTPDRVTLLTALT 155
Query: 296 ACGRAMAFGEGLQIHSIIVK-AGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIA 354
AC RA G +IH+ + GF + ++ Y G + A FE ++
Sbjct: 156 ACSRAGDLSLGRKIHAYMDGVTGFSLP--VANALLDMYVKNGCLEEAVNLFEKMPSRNVV 213
Query: 355 SWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAG 414
SW L++G+ G ++ AR LF+ ++D+ W+AMI+ Y Q+ AL LF M
Sbjct: 214 SWTTLVSGYAFAGQVDKARLLFHQCTEKDLIMWTAMINAYVQHGCFIEALSLFRDMQMHQ 273
Query: 415 VKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAF 474
++P+ T+V++ A+ G L +G+ H++ ++ L+ L A+IDMYAKCG + +
Sbjct: 274 IEPDRFTVVTLLTCCANLGALDQGQLIHQFAEGRNMKLDAVLGTALIDMYAKCGHVEKSV 333
Query: 475 EVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCH 534
EVF + R T W AIICGLA +G A L+++ D+E+ K +S+TFIGVLS CCH
Sbjct: 334 EVFERMEGRDTKA--WTAIICGLATNGQAGRALELFEDMERSEAKPDSVTFIGVLSACCH 391
Query: 535 AGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVV-IW 593
GLVD G + F++MK VY + P ++HY C+V+LLGRAGQL++AE++I+S+P+ D + ++
Sbjct: 392 GGLVDEGRKQFRAMKEVYRIRPRVEHYSCLVNLLGRAGQLDEAEKLIKSIPINKDAMPLF 451
Query: 594 GTLLAASRIHGNVEVGERAAKSLAGLQPSHGPS-RVLLSNIYADAGRWEDAFSIRKEMRD 652
G L+ A + GNV++ ER K + G Q P +L+SN+YA A RWED +R +M
Sbjct: 452 GALITACKAQGNVKMSERLTKRI-GKQGYQIPDVNLLMSNVYATASRWEDVVRVRSKMAH 510
Query: 653 CGMKRLPGFS 662
+K+ G S
Sbjct: 511 PSVKKNAGCS 520
Score = 153 bits (386), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 112/488 (22%), Positives = 206/488 (42%), Gaps = 66/488 (13%)
Query: 41 QGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYI 100
+G++ H+ K+G + + +SL+++Y G
Sbjct: 64 EGRKAHAATLKTGFRWDAYTASSLMDMYTMLG---------------------------- 95
Query: 101 RNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLAS 160
RL AR+VFD+ P + V + M+ + + EA+ + +M + P+ VTL +
Sbjct: 96 ---RLEAARKVFDEMPQRAVVVWNMMLRCYVRCGRNTEAVALAEEMERGRLTPDRVTLLT 152
Query: 161 VISSSVHLGGIWECRMLHGLVIKLMIDGFVI-ISTNLLNMYCVCSSLVEARSLFDEMKER 219
+++ G + R +H + + GF + ++ LL+MY L EA +LF++M R
Sbjct: 153 ALTACSRAGDLSLGRKIHAYMDG--VTGFSLPVANALLDMYVKNGCLEEAVNLFEKMPSR 210
Query: 220 NIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAML 279
N+VSW +++G+A AG V+ AR LF + KD++ W MI+ Y+Q EAL+++R M
Sbjct: 211 NVVSWTTLVSGYAFAGQVDKARLLFHQCTEKDLIMWTAMINAYVQHGCFIEALSLFRDMQ 270
Query: 280 CDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRIN 339
I P+ +V L++ C A +G IH + +I YA CG +
Sbjct: 271 MHQIEPDRFTVVTLLTCCANLGALDQGQLIHQFAEGRNMKLDAVLGTALIDMYAKCGHVE 330
Query: 340 LARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQ 399
+ FE +W A+I G NG Q
Sbjct: 331 KSVEVFERMEGRDTKAWTAIICGLATNG-------------------------------Q 359
Query: 400 PNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLN-NSITLNDNLSA 458
ALELF M + KP+ +T + V A G + EGR + I +
Sbjct: 360 AGRALELFEDMERSEAKPDSVTFIGVLSACCHGGLVDEGRKQFRAMKEVYRIRPRVEHYS 419
Query: 459 AIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNI 518
++++ + G ++ A ++ I ++ + A+I G+ ++ ++ + K+
Sbjct: 420 CLVNLLGRAGQLDEAEKLIKSIPINKDAMPLFGALITACKAQGNVKMSERLTKRIGKQGY 479
Query: 519 KLNSITFI 526
++ + +
Sbjct: 480 QIPDVNLL 487
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 126/224 (56%), Gaps = 3/224 (1%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTF-IQNSLINLYAKCGLISQAKSMF 81
+ L++AL CS +S G++IH+ + G+ + + N+L+++Y K G + +A ++F
Sbjct: 147 RVTLLTALTACSRAGDLSLGRKIHA--YMDGVTGFSLPVANALLDMYVKNGCLEEAVNLF 204
Query: 82 DSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALE 141
+ + + V+ ++SGY +++ AR +F + K + +T+MI + Q+ C+ EAL
Sbjct: 205 EKMPSRNVVSWTTLVSGYAFAGQVDKARLLFHQCTEKDLIMWTAMINAYVQHGCFIEALS 264
Query: 142 VFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYC 201
+FRDM++ + P+ T+ ++++ +LG + + +++H + ++ T L++MY
Sbjct: 265 LFRDMQMHQIEPDRFTVVTLLTCCANLGALDQGQLIHQFAEGRNMKLDAVLGTALIDMYA 324
Query: 202 VCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFE 245
C + ++ +F+ M+ R+ +W ++ G A G A ELFE
Sbjct: 325 KCGHVEKSVEVFERMEGRDTKAWTAIICGLATNGQAGRALELFE 368
>gi|357123975|ref|XP_003563682.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Brachypodium distachyon]
Length = 527
Score = 298 bits (764), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 176/549 (32%), Positives = 287/549 (52%), Gaps = 40/549 (7%)
Query: 116 PIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECR 175
P++ C +I A+ + + V+ D+R G++ + T V+ + L E R
Sbjct: 10 PLRDC---NLLIRTLARRGSFARVMAVYYDLRGRGLVADSFTYPFVLRAIGVLKLSVEGR 66
Query: 176 MLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAG 235
H +K +++L++MY + G
Sbjct: 67 KAHAAAMKTGFWWDAYTASSLMDMYTLL-------------------------------G 95
Query: 236 LVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLIS 295
++AR+LF+ +P + +V W MI Y++ R + A+ + M G+ P+ V +V ++
Sbjct: 96 RADVARKLFDEMPHRALVVWNMMIRCYVRCGRYTAAIALAEEMERSGLTPDKVTLVTSVT 155
Query: 296 ACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIAS 355
C RA G +IH+ + F + ++ Y G + A FE +I S
Sbjct: 156 VCSRAGDLSLGRRIHAYM-DGVFGFSLPVANALLDMYMKNGCLEEAVKLFEQMPSRNIIS 214
Query: 356 WNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGV 415
W L++G+ G ++ AR LF ++D+ W+AMI+ Q+ AL LF M V
Sbjct: 215 WTILVSGYAFAGQLDKARVLFYQCSEKDLIMWTAMINACVQHGCFEEALSLFREMQMQRV 274
Query: 416 KPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFE 475
+P+ T+V++ A+ G L +G W H++ ++ + ++ L A+IDMYAKCG + + E
Sbjct: 275 EPDRFTIVTLLTCCANLGALDQGEWIHQFAVDRKMKVDAVLGTALIDMYAKCGHVKKSME 334
Query: 476 VFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHA 535
VF ++ R T+ W +IICGLA +G A L+++ D+E+ +K +SITFIGVLS CCH
Sbjct: 335 VFEQMQGRDTTA--WTSIICGLATNGQAGRALELFEDMERSKVKPDSITFIGVLSACCHG 392
Query: 536 GLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVV-IWG 594
GLVD G + F +MK VY + P ++HY C+V+LLGRAG L++AE++IR + + D + ++G
Sbjct: 393 GLVDEGRKQFHAMKDVYRIPPRIEHYSCLVNLLGRAGLLDEAEKLIRDIQINKDAMPLFG 452
Query: 595 TLLAASRIHGNVEVGERAAKSLAGLQPSHGPS-RVLLSNIYADAGRWEDAFSIRKEMRDC 653
LL A + GNVE+ ER K + G Q P +L+SN+YA A RWEDA +R +M
Sbjct: 453 ALLTACKAQGNVEMSERLTKRI-GEQGYQIPDVNLLMSNVYATASRWEDAIRVRSKMAHP 511
Query: 654 GMKRLPGFS 662
+K+ G S
Sbjct: 512 TIKKTAGCS 520
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 111/489 (22%), Positives = 211/489 (43%), Gaps = 68/489 (13%)
Query: 41 QGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYI 100
+G++ H+ K+G + + +SL+++Y G A+ +FD V N+MI Y+
Sbjct: 64 EGRKAHAAAMKTGFWWDAYTASSLMDMYTLLGRADVARKLFDEMPHRALVVWNMMIRCYV 123
Query: 101 RNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLAS 160
R C YT+ A+ + +M G+ P++VTL +
Sbjct: 124 R------------------CGRYTA-------------AIALAEEMERSGLTPDKVTLVT 152
Query: 161 VISSSVHLGGIWECRMLHGLVIKLMIDGFVI-ISTNLLNMYCVCSSLVEARSLFDEMKER 219
++ G + R +H + + GF + ++ LL+MY L EA LF++M R
Sbjct: 153 SVTVCSRAGDLSLGRRIHAYMDGVF--GFSLPVANALLDMYMKNGCLEEAVKLFEQMPSR 210
Query: 220 NIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAML 279
NI+SW ++++G+A AG ++ AR LF + KD++ W MI+ +Q EAL+++R M
Sbjct: 211 NIISWTILVSGYAFAGQLDKARVLFYQCSEKDLIMWTAMINACVQHGCFEEALSLFREMQ 270
Query: 280 CDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRIN 339
+ P+ IV L++ C A +G IH V + +I YA CG +
Sbjct: 271 MQRVEPDRFTIVTLLTCCANLGALDQGEWIHQFAVDRKMKVDAVLGTALIDMYAKCGHVK 330
Query: 340 LARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQ 399
+ FE +W ++I G NG Q
Sbjct: 331 KSMEVFEQMQGRDTTAWTSIICGLATNG-------------------------------Q 359
Query: 400 PNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLS-- 457
ALELF M + VKP+ IT + V A G + EGR + + + + +
Sbjct: 360 AGRALELFEDMERSKVKPDSITFIGVLSACCHGGLVDEGR-KQFHAMKDVYRIPPRIEHY 418
Query: 458 AAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRN 517
+ ++++ + G ++ A ++ I+ ++ + A++ G+ ++ ++ + ++
Sbjct: 419 SCLVNLLGRAGLLDEAEKLIRDIQINKDAMPLFGALLTACKAQGNVEMSERLTKRIGEQG 478
Query: 518 IKLNSITFI 526
++ + +
Sbjct: 479 YQIPDVNLL 487
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 128/231 (55%), Gaps = 3/231 (1%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTF-IQNSLINLYAKCGLISQAKSMF 81
++ LV+++ CS +S G++IH+ + G+ + + N+L+++Y K G + +A +F
Sbjct: 147 KVTLVTSVTVCSRAGDLSLGRRIHA--YMDGVFGFSLPVANALLDMYMKNGCLEEAVKLF 204
Query: 82 DSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALE 141
+ + + ++ I++SGY +L+ AR +F + K + +T+MI Q+ C+ EAL
Sbjct: 205 EQMPSRNIISWTILVSGYAFAGQLDKARVLFYQCSEKDLIMWTAMINACVQHGCFEEALS 264
Query: 142 VFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYC 201
+FR+M++ V P+ T+ ++++ +LG + + +H + + ++ T L++MY
Sbjct: 265 LFREMQMQRVEPDRFTIVTLLTCCANLGALDQGEWIHQFAVDRKMKVDAVLGTALIDMYA 324
Query: 202 VCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDV 252
C + ++ +F++M+ R+ +W ++ G A G A ELFE + V
Sbjct: 325 KCGHVKKSMEVFEQMQGRDTTAWTSIICGLATNGQAGRALELFEDMERSKV 375
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 102/243 (41%), Gaps = 35/243 (14%)
Query: 8 SVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINL 67
S+F + D +V+ L C+ A+ QG+ IH ++ + + +LI++
Sbjct: 264 SLFREMQMQRVEPD-RFTIVTLLTCCANLGALDQGEWIHQFAVDRKMKVDAVLGTALIDM 322
Query: 68 YAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMI 127
YAKCG + KSM EVF++ + ++TS+I
Sbjct: 323 YAKCGHVK--KSM-----------------------------EVFEQMQGRDTTAWTSII 351
Query: 128 MGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECR-MLHGLVIKLMI 186
G A N ALE+F DM V P+ +T V+S+ H G + E R H + I
Sbjct: 352 CGLATNGQAGRALELFEDMERSKVKPDSITFIGVLSACCHGGLVDEGRKQFHAMKDVYRI 411
Query: 187 DGFVIISTNLLNMYCVCSSLVEARSLFDEMK--ERNIVSWNVMLNGFAKAGLVELARELF 244
+ + L+N+ L EA L +++ + + + +L G VE++ L
Sbjct: 412 PPRIEHYSCLVNLLGRAGLLDEAEKLIRDIQINKDAMPLFGALLTACKAQGNVEMSERLT 471
Query: 245 ERI 247
+RI
Sbjct: 472 KRI 474
>gi|347954494|gb|AEP33747.1| chloroplast biogenesis 19, partial [Brassica oleracea]
Length = 485
Score = 298 bits (764), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 158/418 (37%), Positives = 249/418 (59%), Gaps = 6/418 (1%)
Query: 249 SKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQ 308
S+ VSW + I + RL+EA + AM G+ PN + ++ L+S C FG+ L
Sbjct: 26 SETTVSWTSRITLLSRNGRLAEAAKEFTAMRLAGVEPNHITLIALLSGCADCEPFGDSL- 84
Query: 309 IHSIIVKAGFDCYDFIQAT-IIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNG 367
H K G D + T I+ Y+ R ARL F+ + +WN +I G++R+G
Sbjct: 85 -HGYACKLGLDRNQVMVGTAILGMYSKRRRFRKARLVFDRVEDKNSVTWNTMIDGYMRSG 143
Query: 368 MIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFC 427
++DA ++F+ M +RD+ SW+AMI+G+ + AL F M +GVKP+ + +++
Sbjct: 144 RVDDAAKVFDEMPERDLISWTAMINGFVKKGLHEEALAWFREMQVSGVKPDYVAVIAALA 203
Query: 428 AIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSV 487
A A+ G L G W H +V++ N +S ++ID+Y +CG + A +VF + RT V
Sbjct: 204 ACANLGALSFGLWVHRFVVSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFDEMEKRT--V 261
Query: 488 SPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKS 547
WN++I G A +G A+ +L + +++ K +++TF G L+ C H GLV+ G RYF++
Sbjct: 262 VSWNSVIVGFAANGHAHESLVYFRRMQEERFKPDAVTFTGALTACSHVGLVEEGVRYFEA 321
Query: 548 MKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGN-V 606
MK Y + P ++HYGC+VDL RAG+LE+A +V+ SMPMK + V+ G+LLAA R HGN
Sbjct: 322 MKRDYRISPRIEHYGCLVDLYSRAGRLEEALKVVESMPMKPNEVVIGSLLAACRTHGNDT 381
Query: 607 EVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
E+ ER K L+ L+ + V+LSN+YA G+WE A +R++M+ G+K+ PGFS +
Sbjct: 382 ELAERMMKRLSELKVKGHSNYVILSNMYAADGQWEGASKMRRKMKGLGLKKQPGFSSI 439
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 114/430 (26%), Positives = 203/430 (47%), Gaps = 46/430 (10%)
Query: 101 RNDRLNDA-REVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLA 159
RN+ N + +++ + VS+TS I ++N EA + F MR+ GV PN +TL
Sbjct: 9 RNNHPNPKLHQKLNQSTSETTVSWTSRITLLSRNGRLAEAAKEFTAMRLAGVEPNHITLI 68
Query: 160 SVISSSVHLGGIWECR----MLHGLVIKLMID-GFVIISTNLLNMYCVCSSLVEARSLFD 214
+++S G +C LHG KL +D V++ T +L MY +AR +FD
Sbjct: 69 ALLS------GCADCEPFGDSLHGYACKLGLDRNQVMVGTAILGMYSKRRRFRKARLVFD 122
Query: 215 EMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTM 274
++++N V+WN M++G+ ++G V+ A ++F+ +P +D++SW MI+G+++ EAL
Sbjct: 123 RVEDKNSVTWNTMIDGYMRSGRVDDAAKVFDEMPERDLISWTAMINGFVKKGLHEEALAW 182
Query: 275 YRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAA 334
+R M G+ P+ V ++ ++AC A GL +H +V F + ++I Y
Sbjct: 183 FREMQVSGVKPDYVAVIAALAACANLGALSFGLWVHRFVVSQDFKNNVRVSNSLIDLYCR 242
Query: 335 CGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGY 394
CG + AR F+ K + SWN++I GF NG ++ F MQ+
Sbjct: 243 CGCVEFARQVFDEMEKRTVVSWNSVIVGFAANGHAHESLVYFRRMQE------------- 289
Query: 395 AQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG-RWAHEYVLNNSITLN 453
E F KP+ +T A + G ++EG R+ + I+
Sbjct: 290 ----------ERF--------KPDAVTFTGALTACSHVGLVEEGVRYFEAMKRDYRISPR 331
Query: 454 DNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHG-DANLTLKIYSD 512
++D+Y++ G + A +V + + V +++ HG D L ++
Sbjct: 332 IEHYGCLVDLYSRAGRLEEALKVVESMPMKPNEVVI-GSLLAACRTHGNDTELAERMMKR 390
Query: 513 LEKRNIKLNS 522
L + +K +S
Sbjct: 391 LSELKVKGHS 400
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 90/301 (29%), Positives = 151/301 (50%), Gaps = 52/301 (17%)
Query: 42 GQQIHSLIFKSGLESN-TFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYI 100
G +H K GL+ N + +++ +Y+K +A+ +FD + V N MI GY+
Sbjct: 81 GDSLHGYACKLGLDRNQVMVGTAILGMYSKRRRFRKARLVFDRVEDKNSVTWNTMIDGYM 140
Query: 101 RNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLAS 160
R+ R++DA +VFD+ P + +S+T+MI GF + EAL FR+M++ GV P+ V + +
Sbjct: 141 RSGRVDDAAKVFDEMPERDLISWTAMINGFVKKGLHEEALAWFREMQVSGVKPDYVAVIA 200
Query: 161 VISSSVHLG----GIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEM 216
+++ +LG G+W +H V+ V +S +L+++YC C + AR +FDEM
Sbjct: 201 ALAACANLGALSFGLW----VHRFVVSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFDEM 256
Query: 217 KERNIVSWNVMLNGFA-----------------------------------KAGLVELAR 241
++R +VSWN ++ GFA GLVE
Sbjct: 257 EKRTVVSWNSVIVGFAANGHAHESLVYFRRMQEERFKPDAVTFTGALTACSHVGLVEEGV 316
Query: 242 ELFERIP-----SKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISA 296
FE + S + +G ++D Y + RL EAL + +M + PN+V+I L++A
Sbjct: 317 RYFEAMKRDYRISPRIEHYGCLVDLYSRAGRLEEALKVVESM---PMKPNEVVIGSLLAA 373
Query: 297 C 297
C
Sbjct: 374 C 374
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 84/185 (45%), Gaps = 10/185 (5%)
Query: 374 QLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSG 433
Q N SW++ I+ ++N + A + F M AGV+PN IT++++ A
Sbjct: 19 QKLNQSTSETTVSWTSRITLLSRNGRLAEAAKEFTAMRLAGVEPNHITLIALLSGCADCE 78
Query: 434 TLKEGRWAHEYVLNNSITLNDNL-SAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNA 492
G H Y + N + AI+ MY+K A VF + D+ + WN
Sbjct: 79 PF--GDSLHGYACKLGLDRNQVMVGTAILGMYSKRRRFRKARLVFDRVEDKNSVT--WNT 134
Query: 493 IICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVY 552
+I G G + K++ ++ +R++ I++ +++ GL + +F+ M+ V
Sbjct: 135 MIDGYMRSGRVDDAAKVFDEMPERDL----ISWTAMINGFVKKGLHEEALAWFREMQ-VS 189
Query: 553 NVEPD 557
V+PD
Sbjct: 190 GVKPD 194
>gi|255578276|ref|XP_002530005.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223530484|gb|EEF32367.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 499
Score = 298 bits (763), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 163/465 (35%), Positives = 268/465 (57%), Gaps = 9/465 (1%)
Query: 207 VEARSLFDEMKERNIVSWNVM-LNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQV 265
+ A SL ++ +++ ++ + +G + A+ LF+++P + + T+I GY +
Sbjct: 35 IHAHSLLTDLHNHSVILGKMLRFAAVSPSGDLPYAQRLFDQMPQPNTFFYNTIIRGYAKS 94
Query: 266 ERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMA---FGEGLQ---IHSIIVKAGFD 319
S + ++ M + + P++ LI A R F L+ IH + K GF
Sbjct: 95 SSPSYCVNLFNQMRQNHVDPDEFTFNFLIKARSRVHKVHNFPSTLECDEIHGAVFKYGFC 154
Query: 320 CYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNM 379
+ F+Q +I+ YA G A F + + SW+ L+ +R G +E ARQ+F++M
Sbjct: 155 SHLFVQNALINLYAVKGSPAAAWRVFNETVGVDVVSWSGLVLAHVRGGELELARQVFDDM 214
Query: 380 QKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGR 439
++DV SW+AM+SGY++ ALELF M DAG++P+E+T+VSV A + G ++ G
Sbjct: 215 PEKDVVSWTAMVSGYSKANCSREALELFWEMSDAGIRPDEVTIVSVISACTNLGDVETGM 274
Query: 440 WAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAM 499
H Y+ N +L A+I+MYAKCG ++ A+ VF +++ + S+ WN++I A
Sbjct: 275 NVHSYINENGFGWMVSLCNALINMYAKCGCVDRAWRVFNNMKRK--SLITWNSMISACAN 332
Query: 500 HGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLK 559
HG A +++S + I + ITF+ +L H GLVD G R F+ M+ Y +E ++
Sbjct: 333 HGYAEDAFELFSCMLNSGIAPDGITFLALLIAYTHKGLVDEGYRLFQIMERDYGIEASIE 392
Query: 560 HYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGL 619
HYGC+VD+LGRAG+LE+A E+I +MP+ ++ ++WG LLAA RI+G+V +GER K L L
Sbjct: 393 HYGCIVDMLGRAGRLEEAYELIVTMPIPSNDIVWGALLAACRIYGDVNMGERVVKKLLEL 452
Query: 620 QPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
+P G +LL +IY +GR +A IR+ M++ G + PG+S V
Sbjct: 453 KPDEGGYYILLRDIYVASGRTAEANHIRQAMQESGAMKNPGYSWV 497
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 112/413 (27%), Positives = 190/413 (46%), Gaps = 39/413 (9%)
Query: 108 AREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVIS--SS 165
A+ +FD+ P Y ++I G+A++ + +F MR V P+E T +I S
Sbjct: 69 AQRLFDQMPQPNTFFYNTIIRGYAKSSSPSYCVNLFNQMRQNHVDPDEFTFNFLIKARSR 128
Query: 166 VH----LGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNI 221
VH EC +HG V K + + L+N+Y V S A +F+E ++
Sbjct: 129 VHKVHNFPSTLECDEIHGAVFKYGFCSHLFVQNALINLYAVKGSPAAAWRVFNETVGVDV 188
Query: 222 VSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCD 281
VSW+ ++ + G +ELAR++F+ +P KDVVSW M+ GY + EAL ++ M
Sbjct: 189 VSWSGLVLAHVRGGELELARQVFDDMPEKDVVSWTAMVSGYSKANCSREALELFWEMSDA 248
Query: 282 GIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLA 341
GI P++V IV +ISAC G+ +HS I + GF + +I+ YA CG ++ A
Sbjct: 249 GIRPDEVTIVSVISACTNLGDVETGMNVHSYINENGFGWMVSLCNALINMYAKCGCVDRA 308
Query: 342 RLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPN 401
F + + +WN++I+ +G ED
Sbjct: 309 WRVFNNMKRKSLITWNSMISACANHGYAED------------------------------ 338
Query: 402 MALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG-RWAHEYVLNNSITLNDNLSAAI 460
A ELF M+++G+ P+ IT +++ A G + EG R + I + I
Sbjct: 339 -AFELFSCMLNSGIAPDGITFLALLIAYTHKGLVDEGYRLFQIMERDYGIEASIEHYGCI 397
Query: 461 IDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDL 513
+DM + G + A+E+ + + + W A++ ++GD N+ ++ L
Sbjct: 398 VDMLGRAGRLEEAYELIVTMPIPSNDIV-WGALLAACRIYGDVNMGERVVKKL 449
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 101/329 (30%), Positives = 162/329 (49%), Gaps = 49/329 (14%)
Query: 44 QIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRND 103
+IH +FK G S+ F+QN+LINLYA G + A +F+ +D V+ + ++ ++R
Sbjct: 143 EIHGAVFKYGFCSHLFVQNALINLYAVKGSPAAAWRVFNETVGVDVVSWSGLVLAHVRGG 202
Query: 104 RLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVIS 163
L AR+VFD P K VS+T+M+ G+++ +C REALE+F +M G+ P+EVT+ SVIS
Sbjct: 203 ELELARQVFDDMPEKDVVSWTAMVSGYSKANCSREALELFWEMSDAGIRPDEVTIVSVIS 262
Query: 164 SSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVS 223
+ +LG + +H + + V + L+NMY C + A +F+ MK +++++
Sbjct: 263 ACTNLGDVETGMNVHSYINENGFGWMVSLCNALINMYAKCGCVDRAWRVFNNMKRKSLIT 322
Query: 224 WNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGI 283
WN M++ A G E A ELF ML GI
Sbjct: 323 WNSMISACANHGYAEDAFELFS-------------------------------CMLNSGI 351
Query: 284 APNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDF-IQATIIHFYAAC-----GR 337
AP+ + + L+ A EG ++ I+ + D+ I+A+I H+ C GR
Sbjct: 352 APDGITFLALLIAYTHKGLVDEGYRLFQIMER------DYGIEASIEHY--GCIVDMLGR 403
Query: 338 INLARLQFELGIKDHIAS----WNALIAG 362
+EL + I S W AL+A
Sbjct: 404 AGRLEEAYELIVTMPIPSNDIVWGALLAA 432
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 107/269 (39%), Gaps = 36/269 (13%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E+ +VS + C+ V G +HS I ++G + N+LIN+YAKCG +
Sbjct: 254 EVTIVSVISACTNLGDVETGMNVHSYINENGFGWMVSLCNALINMYAKCGCV-------- 305
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
DR A VF+ K +++ SMI A + +A E+
Sbjct: 306 --------------------DR---AWRVFNNMKRKSLITWNSMISACANHGYAEDAFEL 342
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWE-CRMLHGLVIKLMIDGFVIISTNLLNMYC 201
F M G+ P+ +T +++ + H G + E R+ + I+ + +++M
Sbjct: 343 FSCMLNSGIAPDGITFLALLIAYTHKGLVDEGYRLFQIMERDYGIEASIEHYGCIVDMLG 402
Query: 202 VCSSLVEARSLFDEMK-ERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMI- 259
L EA L M N + W +L G V + + +++ G I
Sbjct: 403 RAGRLEEAYELIVTMPIPSNDIVWGALLAACRIYGDVNMGERVVKKLLELKPDEGGYYIL 462
Query: 260 --DGYLQVERLSEALTMYRAMLCDGIAPN 286
D Y+ R +EA + +AM G N
Sbjct: 463 LRDIYVASGRTAEANHIRQAMQESGAMKN 491
>gi|345505206|gb|AEN99827.1| chlororespiratory reduction 4, partial [Aethionema grandiflorum]
Length = 594
Score = 298 bits (763), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 187/547 (34%), Positives = 295/547 (53%), Gaps = 47/547 (8%)
Query: 123 YTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVI 182
+ ++I ++ R AL +F M GV ++ +L+ V+ + L + E +HG +
Sbjct: 69 WNAVIKSYSHGIDPRRALLLFCLMIENGVCVDKFSLSLVLKACSRLEFLKEGMQIHGFLR 128
Query: 183 KLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARE 242
K I + + L+ +Y C L AR +FD M +R+ VS+N M++G+ K GL++ A +
Sbjct: 129 KTGIWSDLFLQNCLIGLYLKCGCLGFARQVFDRMPQRDSVSYNSMIDGYVKCGLMKSAHK 188
Query: 243 LFERIPS--KDVVSWGTMIDGYLQV-ERLSEALTMYRAMLCDGIAPNDVMIVDLISACGR 299
LF+ +P K+++SW +MI GY Q + L+ A ++ M P DLIS
Sbjct: 189 LFDLMPREIKNLISWNSMISGYAQTADGLNTASKLFSEM------PEK----DLIS---- 234
Query: 300 AMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNAL 359
I + H GRI A+ F++ + + +W +
Sbjct: 235 --------------------WNSMINGCVKH-----GRIEDAKGLFDVMPRRDVVTWATM 269
Query: 360 IAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGM-VDAGVKPN 418
I G+ + G + A+ LF+ M +RDV + ++M++GY QN+ ALE+F+ M D+ + P+
Sbjct: 270 IDGYAKLGFVHHAKSLFDQMHQRDVVACNSMMAGYVQNKYHMEALEIFNDMEKDSHLSPD 329
Query: 419 EITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFY 478
E T+V V AIA G L + H Y++ L L A+IDM++KCGSI A VF
Sbjct: 330 ETTLVIVLSAIAQLGRLSKAMSMHVYIVEKRFPLGGKLGVALIDMHSKCGSIQHAISVFE 389
Query: 479 HIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLV 538
I ++ S+ WNA+I GLA+HG L + +E+ +I+ + ITFIGVL+ C H+GLV
Sbjct: 390 GIENK--SIDHWNAMIGGLAIHGLGELAFDMLMQIERCSIQPDXITFIGVLNACSHSGLV 447
Query: 539 DLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLA 598
G F+ M+ + +EP L+HYGC+VD+L R+G +E A+ +I MPM+ + VIW + L+
Sbjct: 448 KEGLLCFELMRRKHXIEPRLQHYGCLVDVLSRSGSIELAKHLIEDMPMEPNDVIWRSFLS 507
Query: 599 ASRIHGNVEVGERAAKSLAGLQPSHGPSR-VLLSNIYADAGRWEDAFSIRKEMRDCGMKR 657
A H E GE AK L LQ + PS VLLSN+YA G W+D +R M+ + +
Sbjct: 508 ACSTHEEFETGELVAKHLI-LQAGYNPSSYVLLSNMYASLGMWKDVRRVRMMMKQRKLHK 566
Query: 658 LPGFSGV 664
+PG S +
Sbjct: 567 IPGCSWI 573
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 130/459 (28%), Positives = 217/459 (47%), Gaps = 81/459 (17%)
Query: 22 YELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMF 81
+ L+LV L+ CS + +G QIH + K+G+ S+ F+QN LI LY KCG + A+ +F
Sbjct: 102 FSLSLV--LKACSRLEFLKEGMQIHGFLRKTGIWSDLFLQNCLIGLYLKCGCLGFARQVF 159
Query: 82 DSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTP--IKCCVSYTSMIMGFAQN-DCWRE 138
D D V+ N MI GY++ + A ++FD P IK +S+ SMI G+AQ D
Sbjct: 160 DRMPQRDSVSYNSMIDGYVKCGLMKSAHKLFDLMPREIKNLISWNSMISGYAQTADGLNT 219
Query: 139 ALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLN 198
A ++F +M P + ++ W MI+G
Sbjct: 220 ASKLFSEM------PEKDLIS------------WNS----------MING---------- 241
Query: 199 MYCVCSSLVE-ARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGT 257
CV +E A+ LFD M R++V+W M++G+AK G V A+ LF+++ +DVV+ +
Sbjct: 242 --CVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKSLFDQMHQRDVVACNS 299
Query: 258 MIDGYLQVERLSEALTMYRAMLCDG-IAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKA 316
M+ GY+Q + EAL ++ M D ++P++ +V ++SA + + + +H IV+
Sbjct: 300 MMAGYVQNKYHMEALEIFNDMEKDSHLSPDETTLVIVLSAIAQLGRLSKAMSMHVYIVEK 359
Query: 317 GFDCYDFIQATIIHFYAACGRINLARLQFELGIKDH-IASWNALIAGFIRNGMIEDARQL 375
F + +I ++ CG I A FE GI++ I WNA+I G +G+ E
Sbjct: 360 RFPLGGKLGVALIDMHSKCGSIQHAISVFE-GIENKSIDHWNAMIGGLAIHGLGE----- 413
Query: 376 FNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTL 435
+A ++ + ++P+ IT + V A + SG +
Sbjct: 414 --------------------------LAFDMLMQIERCSIQPDXITFIGVLNACSHSGLV 447
Query: 436 KEGRWAHEYV-LNNSITLNDNLSAAIIDMYAKCGSINTA 473
KEG E + + I ++D+ ++ GSI A
Sbjct: 448 KEGLLCFELMRRKHXIEPRLQHYGCLVDVLSRSGSIELA 486
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 112/436 (25%), Positives = 199/436 (45%), Gaps = 31/436 (7%)
Query: 195 NLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVS 254
N ++ + + L++ +L + + S L FA+ E F +D
Sbjct: 9 NKMHARLITTGLIKNPNLTTRIVLAFVASRRSYLAEFARCVFYEYYLCSFSAGEGEDPYL 68
Query: 255 WGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIV 314
W +I Y AL ++ M+ +G+ + + ++ AC R EG+QIH +
Sbjct: 69 WNAVIKSYSHGIDPRRALLLFCLMIENGVCVDKFSLSLVLKACSRLEFLKEGMQIHGFLR 128
Query: 315 KAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQ 374
K G F+Q +I Y CG + AR F+ + S+N++I G+++ G+++ A +
Sbjct: 129 KTGIWSDLFLQNCLIGLYLKCGCLGFARQVFDRMPQRDSVSYNSMIDGYVKCGLMKSAHK 188
Query: 375 LFNNMQK--RDVYSWSAMISGYAQN-EQPNMALELFHGMVDAGVKPNEITMVSVFCAIAS 431
LF+ M + +++ SW++MISGYAQ + N A +LF M E ++S I
Sbjct: 189 LFDLMPREIKNLISWNSMISGYAQTADGLNTASKLFSEM-------PEKDLISWNSMI-- 239
Query: 432 SGTLKEGRWAHEYVLNNSITLNDNLS-AAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPW 490
+G +K GR L + + D ++ A +ID YAK G ++ A +F + R V
Sbjct: 240 NGCVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKSLFDQMHQR--DVVAC 297
Query: 491 NAIICGLAMHGDANLTLKIYSDLEK-RNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMK 549
N+++ G + L+I++D+EK ++ + T + VLS G R K+M
Sbjct: 298 NSMMAGYVQNKYHMEALEIFNDMEKDSHLSPDETTLVIVLSAIAQLG------RLSKAMS 351
Query: 550 -SVYNVEPDLKHYG----CMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHG 604
VY VE G ++D+ + G ++ A V + K+ + W ++ IHG
Sbjct: 352 MHVYIVEKRFPLGGKLGVALIDMHSKCGSIQHAISVFEGIENKS-IDHWNAMIGGLAIHG 410
Query: 605 NVEVGERAAKSLAGLQ 620
+GE A L ++
Sbjct: 411 ---LGELAFDMLMQIE 423
>gi|449502685|ref|XP_004161713.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g47840-like [Cucumis
sativus]
Length = 712
Score = 298 bits (763), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 183/636 (28%), Positives = 300/636 (47%), Gaps = 95/636 (14%)
Query: 29 ALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLD 88
L+ C + G +H K GL ++ F+ ++L+++Y K G I + SC
Sbjct: 122 GLKTCGLGLNYLYGTNLHGFSVKXGLVNSVFVGSALLDMYMKIGEIGR------SC---- 171
Query: 89 PVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRI 148
+VFD+ P + V++T++I G + L F M
Sbjct: 172 ---------------------KVFDEMPTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGR 210
Query: 149 LGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVE 208
V + A + +S G + R +H +K D ++ +L MY C
Sbjct: 211 SKVEYDSYAYAIALKASADSGALNHGRSIHTQTLKKGFDENSFVANSLTTMYNKC----- 265
Query: 209 ARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERL 268
G ++ F ++ + DVVSW T++ Y+Q+ +
Sbjct: 266 --------------------------GKLDYGLHTFRKMRTLDVVSWTTIVTAYIQMGKE 299
Query: 269 SEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATI 328
L ++ M + PN+ +IS C G Q+H+ ++ GF + +I
Sbjct: 300 DCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNALSVANSI 359
Query: 329 IHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWS 388
+ Y+ CG + ++F +M+ RD+ +WS
Sbjct: 360 MTLYSKCGEL-------------------------------ASVSKVFCSMKFRDIITWS 388
Query: 389 AMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNN 448
+I+ Y+Q A E M G KPNE + SV S L++G+ H +VL+
Sbjct: 389 TIIAAYSQVGYGEEAFEYLSRMRSEGPKPNEFALASVLSVCGSMAILEQGKQLHAHVLSV 448
Query: 449 SITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLK 508
+ + +A+I MYAKCGSI A ++F + + W A+I G A HG + ++
Sbjct: 449 GLEQTSMVCSALIIMYAKCGSIAEASKIF--MDSWKDDIISWTAMISGYAEHGHSQEAIE 506
Query: 509 IYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLL 568
++ +++K ++ +S+TFIGVL+ C HAG+VDLG YF SM Y++ P +HYGCM+DLL
Sbjct: 507 LFENIQKVGLRPDSVTFIGVLTACSHAGMVDLGFYYFNSMSKDYHITPSKEHYGCMIDLL 566
Query: 569 GRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRV 628
RAG+L DAE +IRSMP++ D V+W TLL A RIHG+V+ G+RAA + L P+ + +
Sbjct: 567 CRAGRLHDAETLIRSMPIQWDDVVWSTLLRACRIHGDVDCGQRAAAEVLKLDPNCAGTHI 626
Query: 629 LLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
L+NI+A G+W++A +IR M+ G+ + PG+S V
Sbjct: 627 TLANIFAAKGKWKEAANIRMLMKSKGVVKEPGWSSV 662
Score = 149 bits (375), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 112/492 (22%), Positives = 207/492 (42%), Gaps = 97/492 (19%)
Query: 14 KANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGL 73
++ ++ Y A+ AL+ + A++ G+ IH+ K G + N+F+ NSL +Y KCG
Sbjct: 210 RSKVEYDSYAYAI--ALKASADSGALNHGRSIHTQTLKKGFDENSFVANSLTTMYNKCGK 267
Query: 74 ISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQN 133
+ F TLD V+ +++ YI+ MG +
Sbjct: 268 LDYGLHTFRKMRTLDVVSWTTIVTAYIQ--------------------------MG--KE 299
Query: 134 DCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIIS 193
DC L+ F+ MR VIPNE T ++VIS + + LH V+ + + ++
Sbjct: 300 DC---GLQAFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNALSVA 356
Query: 194 TNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVV 253
+++ +Y C L +F MK R+I++W+ ++ +++ G E A E R+ S
Sbjct: 357 NSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYSQVGYGEEAFEYLSRMRS---- 412
Query: 254 SWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSII 313
+G PN+ + ++S CG +G Q+H+ +
Sbjct: 413 ---------------------------EGPKPNEFALASVLSVCGSMAILEQGKQLHAHV 445
Query: 314 VKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDAR 373
+ G + + + +I YA CG I A F KD I SW A+I+G+ +G ++A
Sbjct: 446 LSVGLEQTSMVCSALIIMYAKCGSIAEASKIFMDSWKDDIISWTAMISGYAEHGHSQEAI 505
Query: 374 QLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSG 433
+LF N+QK G++P+ +T + V A + +G
Sbjct: 506 ELFENIQK-------------------------------VGLRPDSVTFIGVLTACSHAG 534
Query: 434 TLKEGRWAHEYVLNN-SITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNA 492
+ G + + + IT + +ID+ + G ++ A + + + V W+
Sbjct: 535 MVDLGFYYFNSMSKDYHITPSKEHYGCMIDLLCRAGRLHDAETLIRSMPIQWDDV-VWST 593
Query: 493 IICGLAMHGDAN 504
++ +HGD +
Sbjct: 594 LLRACRIHGDVD 605
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 100/402 (24%), Positives = 163/402 (40%), Gaps = 40/402 (9%)
Query: 225 NVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIA 284
N L K ++ AR+LF+++P +D VSW +I GY+ SEAL ++ M
Sbjct: 53 NNQLKILVKTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKMRLQSEL 112
Query: 285 PNDVMIVDL-ISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARL 343
D ++ L + CG + + G +H VK G F+ + ++ Y G I +
Sbjct: 113 RIDPFLLSLGLKTCGLGLNYLYGTNLHGFSVKXGLVNSVFVGSALLDMYMKIGEIGRSCK 172
Query: 344 QFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMA 403
F+ + +W A+I G +R G E
Sbjct: 173 VFDEMPTRNAVTWTAVITGLVRAGYSE-------------------------------AG 201
Query: 404 LELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDM 463
L F GM + V+ + A A SG L GR H L N ++ ++ M
Sbjct: 202 LAYFSGMGRSKVEYDSYAYAIALKASADSGALNHGRSIHTQTLKKGFDENSFVANSLTTM 261
Query: 464 YAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSI 523
Y KCG ++ F + RT V W I+ G + L+ + + N+ N
Sbjct: 262 YNKCGKLDYGLHTFRKM--RTLDVVSWTTIVTAYIQMGKEDCGLQAFKRMRASNVIPNEY 319
Query: 524 TFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRS 583
TF V+S C + + GE+ + V V L ++ L + G+L +V S
Sbjct: 320 TFSAVISCCANFARLKWGEQLHAHVLCVGFVNA-LSVANSIMTLYSKCGELASVSKVFCS 378
Query: 584 MPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGP 625
M + D++ W T++AA + V GE A + L+ ++ S GP
Sbjct: 379 MKFR-DIITWSTIIAA---YSQVGYGEEAFEYLSRMR-SEGP 415
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 123/271 (45%), Gaps = 11/271 (4%)
Query: 350 KDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHG 409
K +A N + ++ ++DAR LF+ + +RD SW+ +ISGY + + AL LF
Sbjct: 46 KVDLAEANNQLKILVKTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSK 105
Query: 410 M---VDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAK 466
M + + P +++ C + + G H + + + + + +A++DMY K
Sbjct: 106 MRLQSELRIDPFLLSLGLKTCGLGLNYLY--GTNLHGFSVKXGLVNSVFVGSALLDMYMK 163
Query: 467 CGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFI 526
G I + +VF + R W A+I GL G + L +S + + ++ +S +
Sbjct: 164 IGEIGRSCKVFDEMPTRNAVT--WTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYA 221
Query: 527 GVLSTCCHAGLVDLGER-YFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMP 585
L +G ++ G + +++K ++ + + + + + G+L+ R M
Sbjct: 222 IALKASADSGALNHGRSIHTQTLKKGFDENSFVAN--SLTTMYNKCGKLDYGLHTFRKM- 278
Query: 586 MKADVVIWGTLLAASRIHGNVEVGERAAKSL 616
DVV W T++ A G + G +A K +
Sbjct: 279 RTLDVVSWTTIVTAYIQMGKEDCGLQAFKRM 309
>gi|225446691|ref|XP_002277494.1| PREDICTED: pentatricopeptide repeat-containing protein At2g41080
[Vitis vinifera]
Length = 657
Score = 298 bits (763), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 164/506 (32%), Positives = 269/506 (53%), Gaps = 39/506 (7%)
Query: 158 LASVIS-SSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEM 216
L S IS +S+ LG + LH L+I IS +LLN+Y C L A +LF M
Sbjct: 59 LQSCISENSLSLG-----KQLHSLIITSGCSSDKFISNHLLNLYSKCGQLDTAITLFGVM 113
Query: 217 KERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYR 276
+NI+S N+++NG+ ++G AR++F+ +P ++V +W M+ G +Q E E L ++
Sbjct: 114 PRKNIMSCNILINGYFRSGDWVTARKMFDEMPERNVATWNAMVAGLIQFEFNEEGLGLFS 173
Query: 277 AMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACG 336
M G P++ + ++ C A G Q+H + K GF+ + +++ H Y CG
Sbjct: 174 RMNELGFLPDEFALGSVLRGCAGLRALVAGRQVHGYVRKCGFEFNLVVVSSLAHMYMKCG 233
Query: 337 RINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQ 396
+ + +L M ++V +W+ +I+G AQ
Sbjct: 234 SLG-------------------------------EGERLIRAMPSQNVVAWNTLIAGRAQ 262
Query: 397 NEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNL 456
N P L+ ++ M AG +P++IT VSV + + TL +G+ H V+ +L ++
Sbjct: 263 NGYPEEVLDQYNMMKMAGFRPDKITFVSVISSCSELATLGQGQQIHAEVIKAGASLIVSV 322
Query: 457 SAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKR 516
+++I MY++CG + + +VF + V W+++I HG + +++ +E+
Sbjct: 323 ISSLISMYSRCGCLEYSLKVFLECEN--GDVVCWSSMIAAYGFHGRGVEAIDLFNQMEQE 380
Query: 517 NIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLED 576
++ N +TF+ +L C H GL + G ++F M Y V+P L+HY CMVDLLGR G +E+
Sbjct: 381 KLEANDVTFLSLLYACSHCGLKEKGIKFFDLMVEKYGVKPRLEHYTCMVDLLGRYGSVEE 440
Query: 577 AEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYAD 636
AE +IRSMP+KADV+ W TLL+A +IH E+ R ++ + L P VLLSNI+A
Sbjct: 441 AEALIRSMPVKADVITWKTLLSACKIHKKTEMARRISEEVFRLDPRDPVPYVLLSNIHAS 500
Query: 637 AGRWEDAFSIRKEMRDCGMKRLPGFS 662
RW+D +RK MRD +K+ PG S
Sbjct: 501 DKRWDDVSDVRKAMRDRKLKKEPGIS 526
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 112/393 (28%), Positives = 192/393 (48%), Gaps = 36/393 (9%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
L+ C + ++S G+Q+HSLI SG S+ FI N L+NLY+KCG + A ++F +
Sbjct: 59 LQSCISENSLSLGKQLHSLIITSGCSSDKFISNHLLNLYSKCGQLDTAITLFGVMPRKNI 118
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
++CNI+I+GY R+ AR++FD+ P + ++ +M+ G Q + E L +F M L
Sbjct: 119 MSCNILINGYFRSGDWVTARKMFDEMPERNVATWNAMVAGLIQFEFNEEGLGLFSRMNEL 178
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
G +P+E L SV+ L + R +HG V K + +++ ++L +MY C SL E
Sbjct: 179 GFLPDEFALGSVLRGCAGLRALVAGRQVHGYVRKCGFEFNLVVVSSLAHMYMKCGSLGEG 238
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLS 269
L M +N+V+WN ++ G A+ G E
Sbjct: 239 ERLIRAMPSQNVVAWNTLIAGRAQNGYPE------------------------------- 267
Query: 270 EALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATII 329
E L Y M G P+ + V +IS+C G+G QIH+ ++KAG + +++I
Sbjct: 268 EVLDQYNMMKMAGFRPDKITFVSVISSCSELATLGQGQQIHAEVIKAGASLIVSVISSLI 327
Query: 330 HFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDV----Y 385
Y+ CG + + F + W+++IA + +G +A LFN M++ +
Sbjct: 328 SMYSRCGCLEYSLKVFLECENGDVVCWSSMIAAYGFHGRGVEAIDLFNQMEQEKLEANDV 387
Query: 386 SWSAMISGYAQNEQPNMALELFHGMVDA-GVKP 417
++ +++ + ++ F MV+ GVKP
Sbjct: 388 TFLSLLYACSHCGLKEKGIKFFDLMVEKYGVKP 420
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 88/313 (28%), Positives = 156/313 (49%), Gaps = 6/313 (1%)
Query: 293 LISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDH 352
L+ +C + G Q+HS+I+ +G FI +++ Y+ CG+++ A F + + +
Sbjct: 58 LLQSCISENSLSLGKQLHSLIITSGCSSDKFISNHLLNLYSKCGQLDTAITLFGVMPRKN 117
Query: 353 IASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVD 412
I S N LI G+ R+G AR++F+ M +R+V +W+AM++G Q E L LF M +
Sbjct: 118 IMSCNILINGYFRSGDWVTARKMFDEMPERNVATWNAMVAGLIQFEFNEEGLGLFSRMNE 177
Query: 413 AGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINT 472
G P+E + SV A L GR H YV N + +++ MY KCGS+
Sbjct: 178 LGFLPDEFALGSVLRGCAGLRALVAGRQVHGYVRKCGFEFNLVVVSSLAHMYMKCGSLGE 237
Query: 473 AFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTC 532
+ + + +V WN +I G A +G L Y+ ++ + + ITF+ V+S+C
Sbjct: 238 GERLIRAM--PSQNVVAWNTLIAGRAQNGYPEEVLDQYNMMKMAGFRPDKITFVSVISSC 295
Query: 533 CHAGLVDLGER-YFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVV 591
+ G++ + + +K+ ++ + ++ + R G LE + +V DVV
Sbjct: 296 SELATLGQGQQIHAEVIKAGASLIVSV--ISSLISMYSRCGCLEYSLKVFLECE-NGDVV 352
Query: 592 IWGTLLAASRIHG 604
W +++AA HG
Sbjct: 353 CWSSMIAAYGFHG 365
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 84/382 (21%), Positives = 154/382 (40%), Gaps = 93/382 (24%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E AL S LR C+ A+ G+Q+H + K G E N + +SL ++Y KCG + + + +
Sbjct: 184 EFALGSVLRGCAGLRALVAGRQVHGYVRKCGFEFNLVVVSSLAHMYMKCGSLGEGERLIR 243
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+ + + VA N +I+G AQN E L+
Sbjct: 244 AMPSQNVVAWNTLIAGR-------------------------------AQNGYPEEVLDQ 272
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
+ M++ G P+++T SVISS L + + + +H VIK V + ++L++MY
Sbjct: 273 YNMMKMAGFRPDKITFVSVISSCSELATLGQGQQIHAEVIKAGASLIVSVISSLISMYSR 332
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
C L + +F E + ++V W+ M+ + G
Sbjct: 333 CGCLEYSLKVFLECENGDVVCWSSMIAAYGFHG--------------------------- 365
Query: 263 LQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD 322
R EA+ ++ M + + NDV + L+ AC +G++ ++V+
Sbjct: 366 ----RGVEAIDLFNQMEQEKLEANDVTFLSLLYACSHCGLKEKGIKFFDLMVE------- 414
Query: 323 FIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ-K 381
+ G+K + + ++ R G +E+A L +M K
Sbjct: 415 -----------------------KYGVKPRLEHYTCMVDLLGRYGSVEEAEALIRSMPVK 451
Query: 382 RDVYSWSAMISGYAQNEQPNMA 403
DV +W ++S +++ MA
Sbjct: 452 ADVITWKTLLSACKIHKKTEMA 473
>gi|449443492|ref|XP_004139511.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Cucumis sativus]
Length = 678
Score = 298 bits (763), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 163/477 (34%), Positives = 265/477 (55%), Gaps = 38/477 (7%)
Query: 192 ISTNLLNMYCVCSSLVEARSLFDEMK----ERNIVSWNVMLNGFAKAGLVELARELFERI 247
+ + +LN L + R++ ++ E ++V N +LN +AK G +E A++LF+++
Sbjct: 107 LYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKM 166
Query: 248 PSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGL 307
P+KD+VSW +I GY Q + SEAL ++ ML G PN+ + L+ A G + G
Sbjct: 167 PTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGR 226
Query: 308 QIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNG 367
Q+H+ +K G+D + ++++ YA R
Sbjct: 227 QLHAFSLKYGYDMNVHVGSSLLDMYA-------------------------------RWA 255
Query: 368 MIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFC 427
+ +A+ +FN++ ++V SW+A+I+G+A+ + + LF M+ G +P T SVF
Sbjct: 256 HMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFT 315
Query: 428 AIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSV 487
A ASSG+L++G+W H +V+ + + +IDMYAK GSI A +VF + + +
Sbjct: 316 ACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQ--DI 373
Query: 488 SPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKS 547
WN+II G A HG L+++ + K ++ N ITF+ VL+ C H+GL+D G+ YF+
Sbjct: 374 VSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFEL 433
Query: 548 MKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVE 607
MK + +E + H+ +VDLLGRAG+L +A + I MP+K +WG LL + R+H N++
Sbjct: 434 MKK-HKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGALLGSCRMHKNMD 492
Query: 608 VGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
+G AA+ + L P VLLSNIYA AGR DA +RK M++ G+K+ P S V
Sbjct: 493 LGVYAAEQIFELDPHDSGPHVLLSNIYASAGRLSDAAKVRKMMKESGVKKEPACSWV 549
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 129/482 (26%), Positives = 212/482 (43%), Gaps = 96/482 (19%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
L C+ + QG+ IH+ I S E + + N ++N+YAKCG + +A+ +FD T D
Sbjct: 112 LNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMPTKDM 171
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
V+ ++ISGY +Q+ EAL +F M L
Sbjct: 172 VSWTVLISGY-------------------------------SQSGQASEALALFPKMLHL 200
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
G PNE TL+S++ +S R LH +K D V + ++LL+MY + + EA
Sbjct: 201 GFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREA 260
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLS 269
+ +F+ + +N+VSWN ++ G A+ G E LF LQ
Sbjct: 261 KVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLF------------------LQ----- 297
Query: 270 EALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATII 329
ML G P + +AC + + +G +H+ ++K+G +I T+I
Sbjct: 298 --------MLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLI 349
Query: 330 HFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSA 389
YA G I A+ F +K I SWN++I+G+ ++G+ +A QLF M K
Sbjct: 350 DMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLK-------- 401
Query: 390 MISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNS 449
A V+PNEIT +SV A + SG L EG++ E + +
Sbjct: 402 -----------------------AKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHK 438
Query: 450 ITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKI 509
I ++D+ + G +N A + + + T+ + W A++ MH N+ L +
Sbjct: 439 IEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPTA-AVWGALLGSCRMH--KNMDLGV 495
Query: 510 YS 511
Y+
Sbjct: 496 YA 497
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 76/340 (22%), Positives = 143/340 (42%), Gaps = 63/340 (18%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E L S L+ + G+Q+H+ K G + N + +SL+++YA+ + +AK +F+
Sbjct: 206 EFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFN 265
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
S + + V+ N +I+G+ R +F L++
Sbjct: 266 SLAAKNVVSWNALIAGHARKGEGEHVMRLF---------------------------LQM 298
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
R G P T +SV ++ G + + + +H VIK I L++MY
Sbjct: 299 LRQ----GFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAK 354
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
S+ +A+ +F + +++IVSWN +++G+A+ GL
Sbjct: 355 SGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLG------------------------- 389
Query: 263 LQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD 322
+EAL ++ ML + PN++ + +++AC + EG ++ K +
Sbjct: 390 ------AEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQV 443
Query: 323 FIQATIIHFYAACGRINLA-RLQFELGIKDHIASWNALIA 361
T++ GR+N A + E+ IK A W AL+
Sbjct: 444 AHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGALLG 483
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 116/261 (44%), Gaps = 37/261 (14%)
Query: 28 SALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTL 87
S C++ ++ QG+ +H+ + KSG + +I N+LI++YAK G I
Sbjct: 312 SVFTACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSI------------- 358
Query: 88 DPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMR 147
DA++VF + + VS+ S+I G+AQ+ EAL++F M
Sbjct: 359 ------------------KDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQML 400
Query: 148 ILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLV 207
V PNE+T SV+++ H G + E + L+ K I+ V ++++ L
Sbjct: 401 KAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVTVVDLLGRAGRLN 460
Query: 208 EARSLFDEMKERNIVS-WNVMLNGFAKAGLVEL----ARELFERIPSKDVVSWGTMIDGY 262
EA +EM + + W +L ++L A ++FE P D + + Y
Sbjct: 461 EANKFIEEMPIKPTAAVWGALLGSCRMHKNMDLGVYAAEQIFELDP-HDSGPHVLLSNIY 519
Query: 263 LQVERLSEALTMYRAMLCDGI 283
RLS+A + + M G+
Sbjct: 520 ASAGRLSDAAKVRKMMKESGV 540
>gi|297728297|ref|NP_001176512.1| Os11g0433100 [Oryza sativa Japonica Group]
gi|62701919|gb|AAX92992.1| hypothetical protein LOC_Os11g24530 [Oryza sativa Japonica Group]
gi|77550326|gb|ABA93123.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|125534237|gb|EAY80785.1| hypothetical protein OsI_35965 [Oryza sativa Indica Group]
gi|125577016|gb|EAZ18238.1| hypothetical protein OsJ_33779 [Oryza sativa Japonica Group]
gi|255680048|dbj|BAH95240.1| Os11g0433100 [Oryza sativa Japonica Group]
Length = 622
Score = 298 bits (763), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 183/564 (32%), Positives = 294/564 (52%), Gaps = 53/564 (9%)
Query: 104 RLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFR--DMRILGVIPNEVTLASV 161
R++DAR +FD P + VS+T+M+ +A+ +EA +F D R N VT ++
Sbjct: 56 RVSDARRLFDGMPDRDVVSWTAMVAAYARRGMLQEARVLFDRPDAR-----RNVVTWTAL 110
Query: 162 ISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNI 221
+S + E L + M + V+ +L Y + +A +LF+ M R+
Sbjct: 111 LSGYARARRVDEAEAL----FEGMAERNVVSWNTMLEAYTAVGRVEDASALFNRMPVRDA 166
Query: 222 VSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCD 281
SWN++L G ++G +E AR++FER+P +DV+SW TMI G + + +A ++ AM
Sbjct: 167 GSWNILLCGLVRSGSLERARKMFERMPVRDVMSWTTMISGLARNGSVDDAWVLFDAMPER 226
Query: 282 GIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLA 341
+ + MI S R E L + +
Sbjct: 227 NVVSWNAMI----SGYARNHRIEEALDLFT------------------------------ 252
Query: 342 RLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPN 401
++ I+D +ASWN +I GFI+N ++ ARQLF+ M KR+V +W+ M++GY Q Q
Sbjct: 253 ----KMPIRD-VASWNIMITGFIQNKDLKSARQLFDEMPKRNVITWTTMMNGYLQCMQSE 307
Query: 402 MALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAII 461
MAL+LF+ M+ G++PN++T + A ++ L EG+ H+ + + + + ++
Sbjct: 308 MALKLFNCMLVQGIQPNQVTFLGSLDACSNLAALCEGQQVHQMICKTPSQFDTFVESTLM 367
Query: 462 DMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLN 521
++YAKCG I A VF ++ + WN II A HG + +Y ++++ K N
Sbjct: 368 NLYAKCGEIRLARNVFDFSMEK--DLISWNGIIAAYAHHGFGIEAMHLYKNMQENGYKPN 425
Query: 522 SITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVI 581
T++G+LS C HAGLVD G + F+SM ++ +HY C+VDL RAG+LEDA+ +I
Sbjct: 426 DATYVGLLSACSHAGLVDEGLKIFESMVKDNSIVVRDEHYTCLVDLCSRAGRLEDAKRLI 485
Query: 582 RSMPMK-ADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRW 640
+K +W LL HGN +G+ AAK L +P + + LL NIYA AG+W
Sbjct: 486 SWFKIKPTSSTVWSALLGGCNSHGNESIGDLAAKHLLEAEPDNAGTYTLLCNIYASAGKW 545
Query: 641 EDAFSIRKEMRDCGMKRLPGFSGV 664
++A IR EM G+K+ PG S +
Sbjct: 546 KEAAEIRSEMNVRGLKKQPGCSWI 569
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 135/516 (26%), Positives = 234/516 (45%), Gaps = 76/516 (14%)
Query: 49 IFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDA 108
+F+ E N N+++ Y G + A ++F+ D + NI++ G +R+ L A
Sbjct: 126 LFEGMAERNVVSWNTMLEAYTAVGRVEDASALFNRMPVRDAGSWNILLCGLVRSGSLERA 185
Query: 109 REVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHL 168
R++F++ P++ +S+T+MI G A+N +A +F M V+
Sbjct: 186 RKMFERMPVRDVMSWTTMISGLARNGSVDDAWVLFDAMPERNVVS--------------- 230
Query: 169 GGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVML 228
W MI G Y + EA LF +M R++ SWN+M+
Sbjct: 231 ---WNA----------MISG-----------YARNHRIEEALDLFTKMPIRDVASWNIMI 266
Query: 229 NGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDV 288
GF + ++ AR+LF+ +P ++V++W TM++GYLQ + AL ++ ML GI PN V
Sbjct: 267 TGFIQNKDLKSARQLFDEMPKRNVITWTTMMNGYLQCMQSEMALKLFNCMLVQGIQPNQV 326
Query: 289 MIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELG 348
+ + AC A EG Q+H +I K F+++T+++ YA CG I LAR F+
Sbjct: 327 TFLGSLDACSNLAALCEGQQVHQMICKTPSQFDTFVESTLMNLYAKCGEIRLARNVFDFS 386
Query: 349 IKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFH 408
++ + SWN +IA + +G +A L+ NMQ+
Sbjct: 387 MEKDLISWNGIIAAYAHHGFGIEAMHLYKNMQEN-------------------------- 420
Query: 409 GMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHE-YVLNNSITLNDNLSAAIIDMYAKC 467
G KPN+ T V + A + +G + EG E V +NSI + D ++D+ ++
Sbjct: 421 -----GYKPNDATYVGLLSACSHAGLVDEGLKIFESMVKDNSIVVRDEHYTCLVDLCSRA 475
Query: 468 GSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIG 527
G + A + + + TS + W+A++ G HG+ ++ DL +++ G
Sbjct: 476 GRLEDAKRLISWFKIKPTSSTVWSALLGGCNSHGNESI-----GDLAAKHLLEAEPDNAG 530
Query: 528 VLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGC 563
+ C+ + ++S NV K GC
Sbjct: 531 TYTLLCNIYASAGKWKEAAEIRSEMNVRGLKKQPGC 566
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 102/376 (27%), Positives = 171/376 (45%), Gaps = 23/376 (6%)
Query: 231 FAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMI 290
A AG V AR LF+ +P +DVVSW M+ Y + L EA ++ N V
Sbjct: 51 LAAAGRVSDARRLFDGMPDRDVVSWTAMVAAYARRGMLQEARVLFDR---PDARRNVVTW 107
Query: 291 VDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQF-ELGI 349
L+S RA E + + + ++ T++ Y A GR+ A F + +
Sbjct: 108 TALLSGYARARRVDEAEALFEGMAERNVVSWN----TMLEAYTAVGRVEDASALFNRMPV 163
Query: 350 KDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHG 409
+D SWN L+ G +R+G +E AR++F M RDV SW+ MISG A+N + A LF
Sbjct: 164 RD-AGSWNILLCGLVRSGSLERARKMFERMPVRDVMSWTTMISGLARNGSVDDAWVLFDA 222
Query: 410 MVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAI-IDMYAKCG 468
M + V VS I SG + R L + + D S I I + +
Sbjct: 223 MPERNV-------VSWNAMI--SGYARNHRIEEALDLFTKMPIRDVASWNIMITGFIQNK 273
Query: 469 SINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGV 528
+ +A ++F + R +V W ++ G + + LK+++ + + I+ N +TF+G
Sbjct: 274 DLKSARQLFDEMPKR--NVITWTTMMNGYLQCMQSEMALKLFNCMLVQGIQPNQVTFLGS 331
Query: 529 LSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKA 588
L C + + G++ + M + D +++L + G++ A V M+
Sbjct: 332 LDACSNLAALCEGQQVHQ-MICKTPSQFDTFVESTLMNLYAKCGEIRLARNVF-DFSMEK 389
Query: 589 DVVIWGTLLAASRIHG 604
D++ W ++AA HG
Sbjct: 390 DLISWNGIIAAYAHHG 405
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 108/248 (43%), Gaps = 21/248 (8%)
Query: 351 DHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGM 410
+H+ N +A G + DAR+LF+ M RDV SW+AM++ YA+ A LF
Sbjct: 39 NHVQDSNWRVAELAAAGRVSDARRLFDGMPDRDVVSWTAMVAAYARRGMLQEARVLFD-- 96
Query: 411 VDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLN-NSITLNDNLSAAIIDMYAKCGS 469
+ N +T ++ A + + E E + N ++ N L A Y G
Sbjct: 97 -RPDARRNVVTWTALLSGYARARRVDEAEALFEGMAERNVVSWNTMLEA-----YTAVGR 150
Query: 470 INTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVL 529
+ A +F + R WN ++CGL G K++ + R++ +++ ++
Sbjct: 151 VEDASALFNRMPVR--DAGSWNILLCGLVRSGSLERARKMFERMPVRDV----MSWTTMI 204
Query: 530 STCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKAD 589
S G VD F +M E ++ + M+ R ++E+A ++ MP++ D
Sbjct: 205 SGLARNGSVDDAWVLFDAMP-----ERNVVSWNAMISGYARNHRIEEALDLFTKMPIR-D 258
Query: 590 VVIWGTLL 597
V W ++
Sbjct: 259 VASWNIMI 266
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 103/214 (48%), Gaps = 40/214 (18%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
++ + +L CS A+ +GQQ+H +I K+ + +TF++++L+NLYAKCG I A+++FD
Sbjct: 325 QVTFLGSLDACSNLAALCEGQQVHQMICKTPSQFDTFVESTLMNLYAKCGEIRLARNVFD 384
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
D ++ N +I+ Y + GF EA+ +
Sbjct: 385 FSMEKDLISWNGIIAAYAHH--------------------------GFGI-----EAMHL 413
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIIS----TNLLN 198
+++M+ G PN+ T ++S+ H G + E + ++K D +++ T L++
Sbjct: 414 YKNMQENGYKPNDATYVGLLSACSHAGLVDEGLKIFESMVK---DNSIVVRDEHYTCLVD 470
Query: 199 MYCVCSSLVEARSLFD--EMKERNIVSWNVMLNG 230
+ L +A+ L ++K + W+ +L G
Sbjct: 471 LCSRAGRLEDAKRLISWFKIKPTSSTVWSALLGG 504
>gi|225434871|ref|XP_002280683.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g59600-like [Vitis vinifera]
Length = 545
Score = 298 bits (763), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 160/477 (33%), Positives = 268/477 (56%), Gaps = 41/477 (8%)
Query: 227 MLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPN 286
+++ + + G + AR+LF++IP+ ++ W + + EAL+ + M +G+ PN
Sbjct: 68 LMSFYTECGQLSNARKLFDKIPNTNIRRWIVLTGACARRGFYEEALSAFSEMQKEGLRPN 127
Query: 287 DVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRI-------- 338
++ ++ ACG G +H++I+K F+ +I + +I+ Y+ CG +
Sbjct: 128 QFVLPSILKACGHLSDRRTGENMHTVILKNSFESDAYIISALIYMYSKCGHVEKACRVFD 187
Query: 339 ---------------------------NLARLQFELGIKDHIASWNALIAGFIRNG---M 368
NL + + G+K ++ SWN LIAGF + G M
Sbjct: 188 WIVDKDLVVMNAMVSGYAQHGFVHEALNLVQKMQQAGVKPNVVSWNTLIAGFSQVGDKSM 247
Query: 369 IEDARQLFN-NMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFC 427
+ + +L N + DV SW+++ISG+ QN + + F M+D G P+ +T+ S+
Sbjct: 248 VSEVFRLMTANGVEPDVVSWTSVISGFVQNFHNHEGFDAFKEMLDQGFCPSSVTISSLLP 307
Query: 428 AIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSV 487
A + L+ G+ H Y + + + + +A++DMYAKCG I+ A +FY + +R T
Sbjct: 308 ACTNVANLRHGKEIHGYAMVIGVEKDVYVRSALVDMYAKCGYISEAKILFYMMPERNTVT 367
Query: 488 SPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKS 547
WN++I G A HG N +++++ +E+ + KL+ +TF VL+ C HAG+V+LGE F+
Sbjct: 368 --WNSLIFGYANHGYCNEAIELFNQMEESDTKLDHLTFTAVLNACSHAGMVELGESLFRK 425
Query: 548 MKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVE 607
M+ Y +EP L+HY CMVDLLGRAG+L +A ++I++MP++ D +WG LL A R HGN+E
Sbjct: 426 MQEKYRIEPRLEHYACMVDLLGRAGKLSEAYDLIKAMPVEPDKFVWGALLGACRNHGNIE 485
Query: 608 VGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
+ E AA+ L L+P S +LLSN+YADAGRW +A ++K M+ + PG S +
Sbjct: 486 LAEVAAEHLFELEPESPGSSLLLSNLYADAGRWGNAAKMKKMMKQRKFGKFPGCSWI 542
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 90/386 (23%), Positives = 169/386 (43%), Gaps = 70/386 (18%)
Query: 38 AVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMIS 97
A+ +G+ +H+ + GL T+ L++ Y +CG
Sbjct: 42 ALYRGRALHAHLVIIGLARLTYFAAKLMSFYTECG------------------------- 76
Query: 98 GYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVT 157
+L++AR++FDK P + + A+ + EAL F +M+ G+ PN+
Sbjct: 77 ------QLSNARKLFDKIPNTNIRRWIVLTGACARRGFYEEALSAFSEMQKEGLRPNQFV 130
Query: 158 LASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMK 217
L S++ + HL +H +++K + I + L+ MY C + +A +FD +
Sbjct: 131 LPSILKACGHLSDRRTGENMHTVILKNSFESDAYIISALIYMYSKCGHVEKACRVFDWIV 190
Query: 218 ERNIVSWNVMLNGFAKAGLVELARELFERIPS---------------------------- 249
++++V N M++G+A+ G V A L +++
Sbjct: 191 DKDLVVMNAMVSGYAQHGFVHEALNLVQKMQQAGVKPNVVSWNTLIAGFSQVGDKSMVSE 250
Query: 250 -----------KDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACG 298
DVVSW ++I G++Q E ++ ML G P+ V I L+ AC
Sbjct: 251 VFRLMTANGVEPDVVSWTSVISGFVQNFHNHEGFDAFKEMLDQGFCPSSVTISSLLPACT 310
Query: 299 RAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNA 358
G +IH + G + ++++ ++ YA CG I+ A++ F + + + +WN+
Sbjct: 311 NVANLRHGKEIHGYAMVIGVEKDVYVRSALVDMYAKCGYISEAKILFYMMPERNTVTWNS 370
Query: 359 LIAGFIRNGMIEDARQLFNNMQKRDV 384
LI G+ +G +A +LFN M++ D
Sbjct: 371 LIFGYANHGYCNEAIELFNQMEESDT 396
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 136/279 (48%), Gaps = 41/279 (14%)
Query: 13 QKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCG 72
QK L+ + + L S L+ C G+ +H++I K+ ES+ +I ++LI +Y+KCG
Sbjct: 120 QKEGLRPNQF--VLPSILKACGHLSDRRTGENMHTVILKNSFESDAYIISALIYMYSKCG 177
Query: 73 LISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDA------------------------ 108
+ +A +FD D V N M+SGY ++ +++A
Sbjct: 178 HVEKACRVFDWIVDKDLVVMNAMVSGYAQHGFVHEALNLVQKMQQAGVKPNVVSWNTLIA 237
Query: 109 --REVFDKTPI-------------KCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIP 153
+V DK+ + VS+TS+I GF QN E + F++M G P
Sbjct: 238 GFSQVGDKSMVSEVFRLMTANGVEPDVVSWTSVISGFVQNFHNHEGFDAFKEMLDQGFCP 297
Query: 154 NEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLF 213
+ VT++S++ + ++ + + +HG + + ++ V + + L++MY C + EA+ LF
Sbjct: 298 SSVTISSLLPACTNVANLRHGKEIHGYAMVIGVEKDVYVRSALVDMYAKCGYISEAKILF 357
Query: 214 DEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDV 252
M ERN V+WN ++ G+A G A ELF ++ D
Sbjct: 358 YMMPERNTVTWNSLIFGYANHGYCNEAIELFNQMEESDT 396
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 60/112 (53%), Gaps = 2/112 (1%)
Query: 5 HFHSVFNSQKANLQNS--DYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQN 62
H H F++ K L + + S L C+ + G++IH G+E + ++++
Sbjct: 279 HNHEGFDAFKEMLDQGFCPSSVTISSLLPACTNVANLRHGKEIHGYAMVIGVEKDVYVRS 338
Query: 63 SLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDK 114
+L+++YAKCG IS+AK +F + V N +I GY + N+A E+F++
Sbjct: 339 ALVDMYAKCGYISEAKILFYMMPERNTVTWNSLIFGYANHGYCNEAIELFNQ 390
>gi|147861249|emb|CAN79322.1| hypothetical protein VITISV_018985 [Vitis vinifera]
Length = 932
Score = 298 bits (763), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 179/579 (30%), Positives = 297/579 (51%), Gaps = 55/579 (9%)
Query: 88 DPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMR 147
D V+ MI+ Y++N+ L A ++F P + V+ ++MI G+A+ A +VF
Sbjct: 5 DNVSYTAMITAYLKNNELRKAEKLFQTMPDRTIVAESAMIDGYAKAGLMDSAQKVF---- 60
Query: 148 ILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLV 207
MID V T+L++ Y +
Sbjct: 61 -----------------------------------DAMIDTNVFSWTSLISGYFRDGQVA 85
Query: 208 EARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVER 267
+A LFD+M +N+VSW M+ G+A+ GL++ AR +F ++P K+ +SW M+ Y+ R
Sbjct: 86 KACQLFDQMPAKNVVSWTTMVLGYARNGLIDQARSVFNQMPEKNTISWTAMMKSYVDNGR 145
Query: 268 LSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQAT 327
EAL ++ M + + MI S C E ++ ++ + + T
Sbjct: 146 TDEALKLFHEMPQRNLYSWNTMI----SGCLDGKRVNEAFKLFHLM-----PLRNAVSWT 196
Query: 328 I-IHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYS 386
I + A G LAR F+ IA+WNA+I ++ +I +A +LFN M +R++ +
Sbjct: 197 IMVSGLARNGFTKLAREYFDQMPNKDIAAWNAMITAYVDECLIVEASELFNLMTERNIVT 256
Query: 387 WSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVL 446
W+AMI GYA++ A++ M+ + ++PNE TM + + S + E AH +
Sbjct: 257 WNAMIDGYARHRPDGEAMKHLILMLRSCIRPNETTMTII---LTSCWGMLELMQAHALAI 313
Query: 447 NNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLT 506
+LS A+I MY++ G I+++ F ++ + V W A++ HG +
Sbjct: 314 VVGCECETSLSNALITMYSRIGDISSSRIAFESLKAK--DVVSWTAMLLAFTYHGHGDHA 371
Query: 507 LKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVD 566
L ++ + K K + ITF+GVLS C HAGLV G++ F SM Y +EP +HY C+VD
Sbjct: 372 LHVFGHMLKSGTKPDEITFVGVLSACSHAGLVKKGQKLFDSMSRAYGLEPRAEHYSCLVD 431
Query: 567 LLGRAGQLEDAEEVIRSMPM-KADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGP 625
+LGRAGQ+ +A +V+ MP + D + G LL A R+HGNVE+ + + L LQP+
Sbjct: 432 ILGRAGQVHEAMDVVWKMPECERDGAVLGALLGACRLHGNVEMADYIGQKLIELQPNSSG 491
Query: 626 SRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
VLL+N++A G W++ +RK+M+D ++++PGFS +
Sbjct: 492 GYVLLANVFAARGNWDEFAEVRKKMKDRNVRKVPGFSQI 530
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 114/465 (24%), Positives = 221/465 (47%), Gaps = 57/465 (12%)
Query: 49 IFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDA 108
+F + +++N F SLI+ Y + G +++A +FD + V+ M+ GY RN ++ A
Sbjct: 59 VFDAMIDTNVFSWTSLISGYFRDGQVAKACQLFDQMPAKNVVSWTTMVLGYARNGLIDQA 118
Query: 109 REVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHL 168
R VF++ P K +S+T+M+ + N EAL++F +M N + ++IS +
Sbjct: 119 RSVFNQMPEKNTISWTAMMKSYVDNGRTDEALKLFHEMPQR----NLYSWNTMISGCLDG 174
Query: 169 GGIWEC-RMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVM 227
+ E ++ H + ++ + +++S N + AR FD+M ++I +WN M
Sbjct: 175 KRVNEAFKLFHLMPLRNAVSWTIMVSGLARNGFTKL-----AREYFDQMPNKDIAAWNAM 229
Query: 228 LNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPND 287
+ + L+ A ELF + +++V+W MIDGY + EA+ ML I PN+
Sbjct: 230 ITAYVDECLIVEASELFNLMTERNIVTWNAMIDGYARHRPDGEAMKHLILMLRSCIRPNE 289
Query: 288 VMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFE- 346
+ ++++C + E +Q H++ + G +C + +I Y+ G I+ +R+ FE
Sbjct: 290 TTMTIILTSCWGML---ELMQAHALAIVVGCECETSLSNALITMYSRIGDISSSRIAFES 346
Query: 347 LGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALEL 406
L KD + SW A++ F +G + AL +
Sbjct: 347 LKAKD-VVSWTAMLLAFTYHG-------------------------------HGDHALHV 374
Query: 407 FHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLS------AAI 460
F M+ +G KP+EIT V V A + +G +K+G+ L +S++ L + +
Sbjct: 375 FGHMLKSGTKPDEITFVGVLSACSHAGLVKKGQ-----KLFDSMSRAYGLEPRAEHYSCL 429
Query: 461 IDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANL 505
+D+ + G ++ A +V + + + + A++ +HG+ +
Sbjct: 430 VDILGRAGQVHEAMDVVWKMPECERDGAVLGALLGACRLHGNVEM 474
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 100/390 (25%), Positives = 179/390 (45%), Gaps = 23/390 (5%)
Query: 216 MKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMY 275
M + VS+ M+ + K + A +LF+ +P + +V+ MIDGY + + A ++
Sbjct: 1 MPHHDNVSYTAMITAYLKNNELRKAEKLFQTMPDRTIVAESAMIDGYAKAGLMDSAQKVF 60
Query: 276 RAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAAC 335
AM I N LIS R + Q+ + + T++ YA
Sbjct: 61 DAM----IDTNVFSWTSLISGYFRDGQVAKACQLFDQMPAKNVVSW----TTMVLGYARN 112
Query: 336 GRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYA 395
G I+ AR F + + SW A++ ++ NG ++A +LF+ M +R++YSW+ MISG
Sbjct: 113 GLIDQARSVFNQMPEKNTISWTAMMKSYVDNGRTDEALKLFHEMPQRNLYSWNTMISGCL 172
Query: 396 QNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDN 455
++ N A +LFH M N ++ + +A +G K R + + N I +
Sbjct: 173 DGKRVNEAFKLFHLMPLR----NAVSWTIMVSGLARNGFTKLAREYFDQMPNKDIAAWNA 228
Query: 456 LSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEK 515
+ A +D +C I A E+F + +R ++ WNA+I G A H +K + +
Sbjct: 229 MITAYVD---EC-LIVEASELFNLMTER--NIVTWNAMIDGYARHRPDGEAMKHLILMLR 282
Query: 516 RNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLE 575
I+ N T +L++C G+++L + + ++ V E + ++ + R G +
Sbjct: 283 SCIRPNETTMTIILTSCW--GMLELMQAH--ALAIVVGCECETSLSNALITMYSRIGDIS 338
Query: 576 DAEEVIRSMPMKADVVIWGTLLAASRIHGN 605
+ S+ K DVV W +L A HG+
Sbjct: 339 SSRIAFESLKAK-DVVSWTAMLLAFTYHGH 367
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 52/126 (41%), Gaps = 31/126 (24%)
Query: 44 QIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRND 103
Q H+L G E T + N+LI +Y++ G IS ++ F+S D
Sbjct: 307 QAHALAIVVGCECETSLSNALITMYSRIGDISSSRIAFESLKAKD--------------- 351
Query: 104 RLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVIS 163
VS+T+M++ F + AL VF M G P+E+T V+S
Sbjct: 352 ----------------VVSWTAMLLAFTYHGHGDHALHVFGHMLKSGTKPDEITFVGVLS 395
Query: 164 SSVHLG 169
+ H G
Sbjct: 396 ACSHAG 401
>gi|449443642|ref|XP_004139586.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
gi|449492832|ref|XP_004159115.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
Length = 663
Score = 298 bits (763), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 182/632 (28%), Positives = 314/632 (49%), Gaps = 33/632 (5%)
Query: 33 CSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVAC 92
CS+ + Q+H L K G +N IQNS+I++Y KC I A+ +F +
Sbjct: 3 CSSVGYIRIAHQLHGLSEKYGFGNNKVIQNSIIDMYIKCDAIYAAEQVFLRIEKPSLFSW 62
Query: 93 NIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVI 152
N MI GY + + A + F + P + VS+ ++I F+ + ++L F +M I G
Sbjct: 63 NCMIYGYSKLHEMGRAIDTFRQMPERDSVSWNTIISAFSHHGLHIQSLGTFVEMWIQGCQ 122
Query: 153 PNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSL 212
PN +T ASV+S+ ++ + LH ++++ V++ L++MY C + ++ +
Sbjct: 123 PNSMTYASVLSACANIYDFQWGKHLHARIVRVEPFLDVLVGNGLVDMYAKCGLIDASKRV 182
Query: 213 FDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEAL 272
F+ ++E N+V+W +++G A G E E
Sbjct: 183 FNTLREHNVVTWTSLISGIAHFGSQE-------------------------------EVY 211
Query: 273 TMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFY 332
++ M D + ++ ++ ++ C G Q+H VK G + + + Y
Sbjct: 212 DIFYQMRKDCVIMDNFILATILGVCEGETNISIGEQLHGFTVKTGMNSSVPVGNATLSMY 271
Query: 333 AACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMIS 392
A CG A L FE + SW +I F +G +E AR FN M +R+V SW+AM+
Sbjct: 272 AKCGDFEKASLAFETMAAHDVISWTTMITSFSHSGNVERARDYFNRMPERNVISWNAMLG 331
Query: 393 GYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITL 452
Y QN L+L+ M+ V+P+ IT V++ A + K G + +
Sbjct: 332 AYCQNSFWEEGLKLYILMLRQEVRPDWITFVTMIGACSELAISKLGTQILSQAVKVGLGS 391
Query: 453 NDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSD 512
+ ++ + I +Y++CG I A +F I+++ ++ WN+I+ G A +G+ ++I+ +
Sbjct: 392 DVSVVNSAITLYSRCGRIEEAQNLFDSIQEK--NLISWNSIMGGYAQNGEGMKVIEIFQN 449
Query: 513 LEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAG 572
+ K + IT+I +LS C H+GLV + +F SM + + L+H+ CMVDL GRAG
Sbjct: 450 MLMAGCKPDHITYIAILSGCSHSGLVKEAKYHFNSMTKDFGISVTLEHFVCMVDLFGRAG 509
Query: 573 QLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSN 632
L+ A ++I MP K + IWG LL+A RIH + E+ E A K+L L + S +LL+N
Sbjct: 510 LLKLALDMIDQMPFKPNASIWGALLSACRIHHDTEMAELAMKNLLELNTENFESYILLAN 569
Query: 633 IYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
Y+ GR E +R+ M++ +++ PG S +
Sbjct: 570 TYSSFGRLECVSEVRQVMKEKRVQKDPGCSWI 601
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 126/505 (24%), Positives = 217/505 (42%), Gaps = 77/505 (15%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+ S L C+ G+ +H+ I + + + N L+++YAKCGLI +K +F
Sbjct: 126 MTYASVLSACANIYDFQWGKHLHARIVRVEPFLDVLVGNGLVDMYAKCGLIDASKRVF-- 183
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
N RE V++TS+I G A E ++F
Sbjct: 184 ----------------------NTLRE-------HNVVTWTSLISGIAHFGSQEEVYDIF 214
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
MR VI + LA+++ I LHG +K ++ V + L+MY C
Sbjct: 215 YQMRKDCVIMDNFILATILGVCEGETNISIGEQLHGFTVKTGMNSSVPVGNATLSMYAKC 274
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYL 263
+A F+ M +++SW M+ F+ +G VE AR+ F R+P ++V+SW M+ Y
Sbjct: 275 GDFEKASLAFETMAAHDVISWTTMITSFSHSGNVERARDYFNRMPERNVISWNAMLGAYC 334
Query: 264 QVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDF 323
Q E L +Y ML + P+ + V +I AC G QI S VK G
Sbjct: 335 QNSFWEEGLKLYILMLRQEVRPDWITFVTMIGACSELAISKLGTQILSQAVKVGLGSDVS 394
Query: 324 IQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRD 383
+ + I Y+ CGRI A+ F+ + ++ SWN+++ G+ +NG
Sbjct: 395 VVNSAITLYSRCGRIEEAQNLFDSIQEKNLISWNSIMGGYAQNG---------------- 438
Query: 384 VYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHE 443
+ +E+F M+ AG KP+ IT +++ + SG +KE ++
Sbjct: 439 ---------------EGMKVIEIFQNMLMAGCKPDHITYIAILSGCSHSGLVKEAKYHF- 482
Query: 444 YVLNNSITLNDNLSAAI------IDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGL 497
NS+T + +S + +D++ + G + A ++ + + + S W A++
Sbjct: 483 ----NSMTKDFGISVTLEHFVCMVDLFGRAGLLKLALDMIDQMPFKPNA-SIWGALLSAC 537
Query: 498 AMHGD---ANLTLKIYSDLEKRNIK 519
+H D A L +K +L N +
Sbjct: 538 RIHHDTEMAELAMKNLLELNTENFE 562
>gi|242080473|ref|XP_002445005.1| hypothetical protein SORBIDRAFT_07g002620 [Sorghum bicolor]
gi|241941355|gb|EES14500.1| hypothetical protein SORBIDRAFT_07g002620 [Sorghum bicolor]
Length = 679
Score = 298 bits (763), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 192/635 (30%), Positives = 311/635 (48%), Gaps = 70/635 (11%)
Query: 62 NSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCV 121
+L+ YA G ++ A+ +FD + + N ++S Y+R R A +F K P K V
Sbjct: 76 TALLTAYADVGNLASARFVFDDMPLRNAASWNALVSLYLRAGRPAAAHALFCKAPAKNAV 135
Query: 122 SYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLV 181
SY ++I G A+ REA V+ +M P + S+ + G
Sbjct: 136 SYGAIITGLARAGMLREAQAVYWEMPPRWRDP--------VGSNAMIWG----------- 176
Query: 182 IKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELAR 241
Y L A +FD M R+++SW+ M++G K G V AR
Sbjct: 177 ------------------YLRGGELGMALRVFDGMAARDVISWSAMVDGLCKYGTVSEAR 218
Query: 242 ELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAM 301
LFE +P ++VVSW +MI GY++ + L ++ M +G+ N + + ++ C +A
Sbjct: 219 RLFEAMPERNVVSWTSMIRGYVKHGMYRDGLLLFLDMRREGVQVNMITLSVVLDGCAQAS 278
Query: 302 AFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIA 361
EG Q+H ++++ GF F+ ++I Y+ G + AR F + I SWN+LI
Sbjct: 279 LVDEGSQVHCLMIRMGFAEDIFLGDSLIIMYSRFGSMADARSLFSFMNQKDIVSWNSLIT 338
Query: 362 GFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMV---------- 411
G+++N MIEDA LF M ++D SW++M+ G+A ++ELF M
Sbjct: 339 GYVQNDMIEDAHVLFKLMPEKDAISWTSMVVGFANRGWMRESVELFEQMPVKDEIAWAAV 398
Query: 412 ---------------------DAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSI 450
G +PN + + A+AS L +G AH Y +N
Sbjct: 399 MSSLVANGNYVSAVRWFCQMSQEGCRPNTVAFSCLLSALASLAMLNQGLQAHAYAVNMGW 458
Query: 451 TLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIY 510
+ + A+++ MYAKCG + A VF I + + N++I A HG A K++
Sbjct: 459 IFDSAVHASLVTMYAKCGRLAEAHRVFSCISHPSLIAT--NSMITAFAQHGLAEDAFKLF 516
Query: 511 SDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGR 570
+ ++ + N +TF+G+L+ C AGLV G YF+SM+SVY ++P+ HY CMVDLLGR
Sbjct: 517 NRMQYDGQRPNHVTFLGILTACARAGLVQHGYNYFESMRSVYGIQPNPDHYTCMVDLLGR 576
Query: 571 AGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLL 630
AG L +A E+ SMP K W LL++S +H N+++ + AA+ L + P + +L
Sbjct: 577 AGFLNEALEMTNSMPQKDYPDAWKVLLSSSSLHSNLDLAKLAAQRLLEIDPYDATAYTVL 636
Query: 631 SNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGVV 665
SN+++ AG ED ++ + PG+S ++
Sbjct: 637 SNMFSSAGMKEDEEMVKVAQLSNMASKSPGYSLII 671
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 96/386 (24%), Positives = 172/386 (44%), Gaps = 100/386 (25%)
Query: 33 CSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVAC 92
C+ V +G Q+H L+ + G + F+ +SLI +Y++ G ++ A+S+F + D V+
Sbjct: 274 CAQASLVDEGSQVHCLMIRMGFAEDIFLGDSLIIMYSRFGSMADARSLFSFMNQKDIVSW 333
Query: 93 NIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVI 152
N +I+GY++ND + DA +F P K +S+TSM++GFA RE++E+F M +
Sbjct: 334 NSLITGYVQNDMIEDAHVLFKLMPEKDAISWTSMVVGFANRGWMRESVELFEQM----PV 389
Query: 153 PNEVTLASVISSSVHLGGI-----WECRM---------------LHGLVIKLMID----- 187
+E+ A+V+SS V G W C+M L L M++
Sbjct: 390 KDEIAWAAVMSSLVANGNYVSAVRWFCQMSQEGCRPNTVAFSCLLSALASLAMLNQGLQA 449
Query: 188 -------GFVI---ISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLV 237
G++ + +L+ MY C L EA +F + ++++ N M+ FA+ GL
Sbjct: 450 HAYAVNMGWIFDSAVHASLVTMYAKCGRLAEAHRVFSCISHPSLIATNSMITAFAQHGLA 509
Query: 238 ELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISAC 297
E A +LF R M DG PN V + +++AC
Sbjct: 510 EDAFKLFNR-------------------------------MQYDGQRPNHVTFLGILTAC 538
Query: 298 GRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWN 357
RA GL V+ G++ ++ +++ GI+ + +
Sbjct: 539 ARA-----GL------VQHGYNYFESMRSV-------------------YGIQPNPDHYT 568
Query: 358 ALIAGFIRNGMIEDARQLFNNMQKRD 383
++ R G + +A ++ N+M ++D
Sbjct: 569 CMVDLLGRAGFLNEALEMTNSMPQKD 594
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 130/297 (43%), Gaps = 60/297 (20%)
Query: 357 NALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQ-----------NEQP----- 400
NAL+ + R G I+DA+QLF+ M RDV SW+A+++ YA ++ P
Sbjct: 45 NALLTSYGRRGRIQDAQQLFDRMPHRDVISWTALLTAYADVGNLASARFVFDDMPLRNAA 104
Query: 401 --NMALELF---------HGMVDAGVKPNEITMVSVFCAIASSGTLKEG---------RW 440
N + L+ H + N ++ ++ +A +G L+E RW
Sbjct: 105 SWNALVSLYLRAGRPAAAHALFCKAPAKNAVSYGAIITGLARAGMLREAQAVYWEMPPRW 164
Query: 441 AHE---------YV----LNNSITLNDNLSA-------AIIDMYAKCGSINTAFEVFYHI 480
Y+ L ++ + D ++A A++D K G+++ A +F +
Sbjct: 165 RDPVGSNAMIWGYLRGGELGMALRVFDGMAARDVISWSAMVDGLCKYGTVSEARRLFEAM 224
Query: 481 RDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDL 540
+R +V W ++I G HG L ++ D+ + +++N IT VL C A LVD
Sbjct: 225 PER--NVVSWTSMIRGYVKHGMYRDGLLLFLDMRREGVQVNMITLSVVLDGCAQASLVDE 282
Query: 541 GERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLL 597
G + M + E D+ ++ + R G + DA + M K D+V W +L+
Sbjct: 283 GSQVHCLMIRMGFAE-DIFLGDSLIIMYSRFGSMADARSLFSFMNQK-DIVSWNSLI 337
>gi|297798510|ref|XP_002867139.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
gi|297312975|gb|EFH43398.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
Length = 824
Score = 298 bits (763), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 190/646 (29%), Positives = 320/646 (49%), Gaps = 104/646 (16%)
Query: 21 DYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSM 80
DY S L+ C V+ G +IH L K G + ++ SLI+LY + G +
Sbjct: 152 DYR-TFPSVLKACRN---VTDGNKIHCLALKFGFMWDVYVAASLIHLYCRYGAVV----- 202
Query: 81 FDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREAL 140
+AR +FD+ P + S+ +MI G+ Q+ +EAL
Sbjct: 203 --------------------------NARILFDEMPTRDMGSWNAMISGYCQSGNAKEAL 236
Query: 141 EVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMY 200
+ +R + + VT+ S++S+ G +H IK ++ + +S L+++Y
Sbjct: 237 TLSDGLRAM----DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLY 292
Query: 201 CVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMID 260
A+ G ++ +++F+R+ +D++SW ++I
Sbjct: 293 -------------------------------AEFGSLKDCQKVFDRMYVRDLISWNSIIK 321
Query: 261 GYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDC 320
Y E+ A+ +++ M I P+ + ++ L S + + ++ G+
Sbjct: 322 AYELNEQPLRAILLFQEMRLSRIQPDCLTLISLASILSQLGEIRACRSVQGFTLRKGW-- 379
Query: 321 YDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ 380
F++ I NA++ + + G+++ AR +FN +
Sbjct: 380 --FLEDITIG--------------------------NAVVVMYAKLGLVDSARAVFNWLP 411
Query: 381 KRDVYSWSAMISGYAQNEQPNMALELFHGMVDAG--VKPNEITMVSVFCAIASSGTLKEG 438
+DV SW+ +ISGYAQN + A+E+++ M + G + N+ T VSV A + +G L++G
Sbjct: 412 NKDVISWNTIISGYAQNGFASEAIEMYNIMEEEGGEISANQGTWVSVLPACSQAGALRQG 471
Query: 439 RWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLA 498
H +L N + L+ + ++ DMY KCG ++ A +FY I R SV PWN +I
Sbjct: 472 MKLHGRLLKNGLYLDVFVGTSLADMYGKCGRLDDALSLFYQI-PRVNSV-PWNTLIACHG 529
Query: 499 MHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDL 558
HG + ++ ++ +K + ITF+ +LS C H+GLVD GE F+ M++ Y + P L
Sbjct: 530 FHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGEWCFEMMQTDYGITPSL 589
Query: 559 KHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAG 618
KHYGCMVDL GRAGQLE A I+SMP++ D IWG LL+A R+HGNV++G+ A++ L
Sbjct: 590 KHYGCMVDLYGRAGQLEIALNFIKSMPLQPDASIWGALLSACRVHGNVDLGKIASEHLFE 649
Query: 619 LQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
++P H VLLSN+YA AG+WE IR G+++ PG+S +
Sbjct: 650 VEPEHVGYHVLLSNMYASAGKWEGVDEIRSITSGKGLRKTPGWSSM 695
Score = 186 bits (472), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 163/622 (26%), Positives = 275/622 (44%), Gaps = 119/622 (19%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
RYC+ + + +H+ + S N I L+NLY G ++ A+ FD D
Sbjct: 61 FRYCTN---LQSAKCLHARLVVSNAIQNVCISAKLVNLYCYLGNVALARYTFDHIHNRDV 117
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
A N+MISGY R + I+C +F M
Sbjct: 118 YAWNLMISGY--------GRAGYSSEVIRC--------------------FSLF--MLSS 147
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
G+ P+ T SV+ + + + + +H L +K V ++ +L+++YC ++V A
Sbjct: 148 GLQPDYRTFPSVLKACRN---VTDGNKIHCLALKFGFMWDVYVAASLIHLYCRYGAVVNA 204
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLS 269
R LFDEM R++ SWN M++G+ ++G
Sbjct: 205 RILFDEMPTRDMGSWNAMISGYCQSG-------------------------------NAK 233
Query: 270 EALTMYRAMLCDGI-APNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATI 328
EALT L DG+ A + V +V L+SAC A F G+ IHS +K G + F+ +
Sbjct: 234 EALT-----LSDGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKL 288
Query: 329 IHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWS 388
I YA G ++D +++F+ M RD+ SW+
Sbjct: 289 IDLYAEFGS-------------------------------LKDCQKVFDRMYVRDLISWN 317
Query: 389 AMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNN 448
++I Y NEQP A+ LF M + ++P+ +T++S+ ++ G ++ R + L
Sbjct: 318 SIIKAYELNEQPLRAILLFQEMRLSRIQPDCLTLISLASILSQLGEIRACRSVQGFTLRK 377
Query: 449 SITLND-NLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTL 507
L D + A++ MYAK G +++A VF + ++ V WN II G A +G A+ +
Sbjct: 378 GWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNK--DVISWNTIISGYAQNGFASEAI 435
Query: 508 KIYSDLEKR--NIKLNSITFIGVLSTCCHAGLVDLGER-YFKSMKSVYNVEPDLKHYGCM 564
++Y+ +E+ I N T++ VL C AG + G + + + +K+ + D+ +
Sbjct: 436 EMYNIMEEEGGEISANQGTWVSVLPACSQAGALRQGMKLHGRLLKN--GLYLDVFVGTSL 493
Query: 565 VDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSL--AGLQPS 622
D+ G+ G+L+DA + +P + + V W TL+A HG+ E K + G++P
Sbjct: 494 ADMYGKCGRLDDALSLFYQIP-RVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPD 552
Query: 623 HGPSRVLLSNI----YADAGRW 640
H LLS D G W
Sbjct: 553 HITFVTLLSACSHSGLVDEGEW 574
>gi|18481717|gb|AAL73539.1|AF466200_18 hypothetical protein S250_18C08.29 [Sorghum bicolor]
Length = 679
Score = 298 bits (762), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 192/635 (30%), Positives = 311/635 (48%), Gaps = 70/635 (11%)
Query: 62 NSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCV 121
+L+ YA G ++ A+ +FD + + N ++S Y+R R A +F K P K V
Sbjct: 76 TALLTAYADVGNLASARFVFDDMPLRNAASWNALVSLYLRAGRPAAAHALFCKAPAKNAV 135
Query: 122 SYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLV 181
SY ++I G A+ REA V+ +M P + S+ + G
Sbjct: 136 SYGAIITGLARAGMLREAQAVYWEMPPRWRDP--------VGSNAMIWG----------- 176
Query: 182 IKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELAR 241
Y L A +FD M R+++SW+ M++G K G V AR
Sbjct: 177 ------------------YLRGGELGMALRVFDGMAARDVISWSAMVDGLCKYGTVSEAR 218
Query: 242 ELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAM 301
LFE +P ++VVSW +MI GY++ + L ++ M +G+ N + + ++ C +A
Sbjct: 219 RLFEAMPERNVVSWTSMIRGYVKHGMYRDGLLLFLDMRREGVQVNMITLSVVLDGCAQAS 278
Query: 302 AFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIA 361
EG Q+H ++++ GF F+ ++I Y+ G + AR F + I SWN+LI
Sbjct: 279 LVDEGSQVHCLMIRMGFAEDIFLGDSLIIMYSRFGSMADARSLFSFMNQKDIVSWNSLIT 338
Query: 362 GFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMV---------- 411
G+++N MIEDA LF M ++D SW++M+ G+A ++ELF M
Sbjct: 339 GYVQNDMIEDAHVLFKLMPEKDAISWTSMVVGFANRGWMRESVELFEQMPVKDEIAWAAV 398
Query: 412 ---------------------DAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSI 450
G +PN + + A+AS L +G AH Y +N
Sbjct: 399 MSSLVANGNYVSAVRWFCQMSQEGCRPNTVAFSCLLSALASLAMLNQGLQAHAYAVNMGW 458
Query: 451 TLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIY 510
+ + A+++ MYAKCG + A VF I + + N++I A HG A K++
Sbjct: 459 IFDSAVHASLVTMYAKCGRLAEAHRVFSCISHPSLIAT--NSMITAFAQHGLAEDAFKLF 516
Query: 511 SDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGR 570
+ ++ + N +TF+G+L+ C AGLV G YF+SM+SVY ++P+ HY CMVDLLGR
Sbjct: 517 NRMQYDGQRPNHVTFLGILTACARAGLVQHGYNYFESMRSVYGIQPNPDHYTCMVDLLGR 576
Query: 571 AGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLL 630
AG L +A E+ SMP K W LL++S +H N+++ + AA+ L + P + +L
Sbjct: 577 AGFLNEALEMTNSMPQKDYPDAWKALLSSSSLHSNLDLAKLAAQRLLEIDPYDATAYTVL 636
Query: 631 SNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGVV 665
SN+++ AG ED ++ + PG+S ++
Sbjct: 637 SNMFSSAGMKEDEEMVKVAQLSNMASKSPGYSLII 671
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 107/441 (24%), Positives = 198/441 (44%), Gaps = 103/441 (23%)
Query: 33 CSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVAC 92
C+ V +G Q+H L+ + G + F+ +SLI +Y++ G ++ A+S+F + D V+
Sbjct: 274 CAQASLVDEGSQVHCLMIRMGFAEDIFLGDSLIIMYSRFGSMADARSLFSFMNQKDIVSW 333
Query: 93 NIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVI 152
N +I+GY++ND + DA +F P K +S+TSM++GFA RE++E+F M +
Sbjct: 334 NSLITGYVQNDMIEDAHVLFKLMPEKDAISWTSMVVGFANRGWMRESVELFEQM----PV 389
Query: 153 PNEVTLASVISSSVHLGGI-----WECRM---------------LHGLVIKLMID----- 187
+E+ A+V+SS V G W C+M L L M++
Sbjct: 390 KDEIAWAAVMSSLVANGNYVSAVRWFCQMSQEGCRPNTVAFSCLLSALASLAMLNQGLQA 449
Query: 188 -------GFVI---ISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLV 237
G++ + +L+ MY C L EA +F + ++++ N M+ FA+ GL
Sbjct: 450 HAYAVNMGWIFDSAVHASLVTMYAKCGRLAEAHRVFSCISHPSLIATNSMITAFAQHGLA 509
Query: 238 ELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISAC 297
E A +LF R M DG PN V + +++AC
Sbjct: 510 EDAFKLFNR-------------------------------MQYDGQRPNHVTFLGILTAC 538
Query: 298 GRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWN 357
RA GL V+ G++ ++ +++ GI+ + +
Sbjct: 539 ARA-----GL------VQHGYNYFESMRSV-------------------YGIQPNPDHYT 568
Query: 358 ALIAGFIRNGMIEDARQLFNNMQKRDVY-SWSAMISGYAQNEQPNMALELFHGMVDAGVK 416
++ R G + +A ++ N+M ++D +W A++S + + ++A +++ +
Sbjct: 569 CMVDLLGRAGFLNEALEMTNSMPQKDYPDAWKALLSSSSLHSNLDLAKLAAQRLLE--ID 626
Query: 417 PNEITMVSVFCAIASSGTLKE 437
P + T +V + SS +KE
Sbjct: 627 PYDATAYTVLSNMFSSAGMKE 647
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 130/297 (43%), Gaps = 60/297 (20%)
Query: 357 NALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQ-----------NEQP----- 400
NAL+ + R G I+DA+QLF+ M RDV SW+A+++ YA ++ P
Sbjct: 45 NALLTSYGRRGRIQDAQQLFDRMPHRDVISWTALLTAYADVGNLASARFVFDDMPLRNAA 104
Query: 401 --NMALELF---------HGMVDAGVKPNEITMVSVFCAIASSGTLKEG---------RW 440
N + L+ H + N ++ ++ +A +G L+E RW
Sbjct: 105 SWNALVSLYLRAGRPAAAHALFCKAPAKNAVSYGAIITGLARAGMLREAQAVYWEMPPRW 164
Query: 441 AHE---------YV----LNNSITLNDNLSA-------AIIDMYAKCGSINTAFEVFYHI 480
Y+ L ++ + D ++A A++D K G+++ A +F +
Sbjct: 165 RDPVGSNAMIWGYLRGGELGMALRVFDGMAARDVISWSAMVDGLCKYGTVSEARRLFEAM 224
Query: 481 RDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDL 540
+R +V W ++I G HG L ++ D+ + +++N IT VL C A LVD
Sbjct: 225 PER--NVVSWTSMIRGYVKHGMYRDGLLLFLDMRREGVQVNMITLSVVLDGCAQASLVDE 282
Query: 541 GERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLL 597
G + M + E D+ ++ + R G + DA + M K D+V W +L+
Sbjct: 283 GSQVHCLMIRMGFAE-DIFLGDSLIIMYSRFGSMADARSLFSFMNQK-DIVSWNSLI 337
>gi|449465002|ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
gi|449500809|ref|XP_004161200.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 926
Score = 298 bits (762), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 189/637 (29%), Positives = 310/637 (48%), Gaps = 98/637 (15%)
Query: 28 SALRYCSAHIA-VSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCST 86
S++ C A +A V +G+Q+H LI K G S + NSLI+ Y
Sbjct: 255 SSILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSLISFY------------------ 296
Query: 87 LDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDM 146
++ A+++FD+ + +S+ SMI G+ +N +E+F M
Sbjct: 297 -------------FVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKM 343
Query: 147 RILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSL 206
+ GV + T+ +V + ++G + ++LH IK
Sbjct: 344 LVFGVDIDLATMVNVFVACANIGTLLLGKVLHSYSIK----------------------- 380
Query: 207 VEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVE 266
A +L +R + N +L+ ++K G + A +FER+ K VVSW +MI GY++ E
Sbjct: 381 --AATL-----DREVRFNNTLLDMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVR-E 432
Query: 267 RLSE-ALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQ 325
LS+ A+ ++ M G+ P+ + +++AC G +H I + + F+
Sbjct: 433 GLSDGAIKLFDEMKSRGVVPDVYAVTSILNACAINGNLKSGKIVHDYIRENNLETNSFVS 492
Query: 326 ATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVY 385
+ YA CG + +DA +F++M+K+DV
Sbjct: 493 NALTDMYAKCGSM-------------------------------KDAHDVFSHMKKKDVI 521
Query: 386 SWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYV 445
SW+ MI GY +N PN AL LF M KP+ T+ + A AS L +GR H Y
Sbjct: 522 SWNTMIGGYTKNSLPNEALTLFAEMQRES-KPDGTTVACILPACASLAALDKGREIHGYA 580
Query: 446 LNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANL 505
L N + + ++ A++DMY KCG + A +F I ++ + W +I G MHG +
Sbjct: 581 LRNGYSEDKYVTNAVVDMYVKCGLLVLARSLFDMIPNK--DLVSWTVMIAGYGMHGYGSE 638
Query: 506 TLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMV 565
+ ++ + I+ + ++FI +L C H+GL+D G + F MK +EP+L+HY CMV
Sbjct: 639 AINTFNQMRMTGIEPDEVSFISILYACSHSGLLDEGWKIFNIMKKECQIEPNLEHYACMV 698
Query: 566 DLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGP 625
DLL R G L A + I++MP+K D IWG LL RIH +V++ E+ A+ + L+P +
Sbjct: 699 DLLARTGNLVKAHKFIKAMPIKPDATIWGALLCGCRIHHDVKLAEKVAERIFELEPENTG 758
Query: 626 SRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
VLL+NIYA+A +WE+ +RK++ G+K+ PG S
Sbjct: 759 YYVLLANIYAEAEKWEEVQKLRKKIGQRGLKKNPGCS 795
Score = 198 bits (504), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 149/590 (25%), Positives = 269/590 (45%), Gaps = 102/590 (17%)
Query: 18 QNSDYEL-ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQ 76
QNS+++L A S L+ C+ ++ G+++ S+I SG+ + + L+ +Y KCG
Sbjct: 144 QNSNFDLGAYCSILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCG---- 199
Query: 77 AKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCW 136
L + R VFDK + MI ++ + +
Sbjct: 200 ---------------------------DLKEGRMVFDKLSESKIFLWNLMISEYSGSGNY 232
Query: 137 REALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNL 196
E++ +F+ M LG+ PN T +S++ + + E R +HGL+ KL + + + +L
Sbjct: 233 GESINLFKQMLELGIKPNSYTFSSILKCFAAVARVEEGRQVHGLICKLGFNSYNTVVNSL 292
Query: 197 LNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWG 256
++ Y V + A+ LFDE+ +R+++SWN M++G+ K GL + E+F +
Sbjct: 293 ISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIK---------- 342
Query: 257 TMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKA 316
ML G+ + +V++ AC G +HS +KA
Sbjct: 343 ---------------------MLVFGVDIDLATMVNVFVACANIGTLLLGKVLHSYSIKA 381
Query: 317 G-FDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQL 375
D T++ Y+ CG +N A FE + + SW ++I G++R G+ + A +L
Sbjct: 382 ATLDREVRFNNTLLDMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKL 441
Query: 376 FNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTL 435
F+ M+ R GV P+ + S+ A A +G L
Sbjct: 442 FDEMKSR-------------------------------GVVPDVYAVTSILNACAINGNL 470
Query: 436 KEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIIC 495
K G+ H+Y+ N++ N +S A+ DMYAKCGS+ A +VF H++ + V WN +I
Sbjct: 471 KSGKIVHDYIRENNLETNSFVSNALTDMYAKCGSMKDAHDVFSHMKKK--DVISWNTMIG 528
Query: 496 GLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLG-ERYFKSMKSVYNV 554
G + N L ++++++ R K + T +L C +D G E + ++++ Y+
Sbjct: 529 GYTKNSLPNEALTLFAEMQ-RESKPDGTTVACILPACASLAALDKGREIHGYALRNGYSE 587
Query: 555 EPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHG 604
+ + + +VD+ + G L A + +P K D+V W ++A +HG
Sbjct: 588 DKYVTN--AVVDMYVKCGLLVLARSLFDMIPNK-DLVSWTVMIAGYGMHG 634
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/347 (25%), Positives = 152/347 (43%), Gaps = 79/347 (22%)
Query: 25 ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSC 84
A+ S L C+ + + G+ +H I ++ LE+N+F+ N+L ++YAKCG + A +F
Sbjct: 456 AVTSILNACAINGNLKSGKIVHDYIRENNLETNSFVSNALTDMYAKCGSMKDAHDVFSHM 515
Query: 85 STLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFR 144
D ++ N MI GY +N N+A +F E+ R
Sbjct: 516 KKKDVISWNTMIGGYTKNSLPNEALTLF---------------------------AEMQR 548
Query: 145 DMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCS 204
+ + P+ T+A ++ + L + + R +HG ++ ++ +++MY C
Sbjct: 549 ESK-----PDGTTVACILPACASLAALDKGREIHGYALRNGYSEDKYVTNAVVDMYVKCG 603
Query: 205 SLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQ 264
LV ARSLFD + +++VSW VM+ G+ G +G
Sbjct: 604 LLVLARSLFDMIPNKDLVSWTVMIAGYGMHG-------------------YG-------- 636
Query: 265 VERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFI 324
SEA+ + M GI P++V + ++ AC + EG +I +I+ K +C I
Sbjct: 637 ----SEAINTFNQMRMTGIEPDEVSFISILYACSHSGLLDEGWKIFNIMKK---ECQ--I 687
Query: 325 QATIIHFYAACGRINLARL-------QF--ELGIKDHIASWNALIAG 362
+ + H+ AC LAR +F + IK W AL+ G
Sbjct: 688 EPNLEHY--ACMVDLLARTGNLVKAHKFIKAMPIKPDATIWGALLCG 732
>gi|356519174|ref|XP_003528249.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Glycine max]
Length = 975
Score = 298 bits (762), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 179/639 (28%), Positives = 313/639 (48%), Gaps = 96/639 (15%)
Query: 25 ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSC 84
+V+ + C+A V G +H L FK G+ + NSL+++Y+KCG
Sbjct: 301 TMVTVIPACAAVGEVRMGMVVHGLAFKLGITEEVTVNNSLVDMYSKCGY----------- 349
Query: 85 STLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFR 144
L +AR +FD K VS+ ++I G+++ +R E+ +
Sbjct: 350 --------------------LGEARALFDMNGGKNVVSWNTIIWGYSKEGDFRGVFELLQ 389
Query: 145 DM-RILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
+M R V NEVT+ +V+ + + + +HG + GF
Sbjct: 390 EMQREEKVRVNEVTVLNVLPACSGEHQLLSLKEIHGYAFR---HGF-------------- 432
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYL 263
L DE+ N + +AK ++ A +F + K V SW +I +
Sbjct: 433 --------LKDELVA------NAFVAAYAKCSSLDCAERVFCGMEGKTVSSWNALIGAHA 478
Query: 264 QVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDF 323
Q ++L ++ M+ G+ P+ I L+ AC R G +IH +++ G + +F
Sbjct: 479 QNGFPGKSLDLFLVMMDSGMDPDRFTIGSLLLACARLKFLRCGKEIHGFMLRNGLELDEF 538
Query: 324 IQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRD 383
I +++ Y C + L +L +F+ M+ +
Sbjct: 539 IGISLMSLYIQCSSMLLGKL-------------------------------IFDKMENKS 567
Query: 384 VYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHE 443
+ W+ MI+G++QNE P AL+ F M+ G+KP EI + V A + L+ G+ H
Sbjct: 568 LVCWNVMITGFSQNELPCEALDTFRQMLSGGIKPQEIAVTGVLGACSQVSALRLGKEVHS 627
Query: 444 YVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDA 503
+ L ++ + ++ A+IDMYAKCG + + +F + ++ +V WN II G +HG
Sbjct: 628 FALKAHLSEDAFVTCALIDMYAKCGCMEQSQNIFDRVNEKDEAV--WNVIIAGYGIHGHG 685
Query: 504 NLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGC 563
++++ ++ + + +S TF+GVL C HAGLV G +Y M+++Y V+P L+HY C
Sbjct: 686 LKAIELFELMQNKGGRPDSFTFLGVLIACNHAGLVTEGLKYLGQMQNLYGVKPKLEHYAC 745
Query: 564 MVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSH 623
+VD+LGRAGQL +A +++ MP + D IW +LL++ R +G++E+GE +K L L+P+
Sbjct: 746 VVDMLGRAGQLTEALKLVNEMPDEPDSGIWSSLLSSCRNYGDLEIGEEVSKKLLELEPNK 805
Query: 624 GPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
+ VLLSN+YA G+W++ +R+ M++ G+ + G S
Sbjct: 806 AENYVLLSNLYAGLGKWDEVRKVRQRMKENGLHKDAGCS 844
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 138/595 (23%), Positives = 261/595 (43%), Gaps = 103/595 (17%)
Query: 15 ANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLI 74
+L ++ L V+ + C+ V G+ +H+L K+G S+ F+ N+LI +Y KCG +
Sbjct: 189 TDLAPDNFTLPCVA--KACAGVADVELGEAVHALALKAGGFSDAFVGNALIAMYGKCGFV 246
Query: 75 SQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQND 134
A +F++ +RN L VS+ S++ ++N
Sbjct: 247 ESAVKVFET----------------MRNRNL---------------VSWNSVMYACSENG 275
Query: 135 CWREALEVFRDMRIL---GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVI 191
+ E VF+ + I G++P+ T+ +VI + +G + ++HGL KL I V
Sbjct: 276 GFGECCGVFKRLLISEEEGLVPDVATMVTVIPACAAVGEVRMGMVVHGLAFKLGITEEVT 335
Query: 192 ISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKD 251
++ +L++MY C L EAR+ LF+ K+
Sbjct: 336 VNNSLVDMYSKCGYLGEARA-------------------------------LFDMNGGKN 364
Query: 252 VVSWGTMIDGYLQVERLSEALTMYRAMLCD-GIAPNDVMIVDLISACGRAMAFGEGLQIH 310
VVSW T+I GY + + + M + + N+V +++++ AC +IH
Sbjct: 365 VVSWNTIIWGYSKEGDFRGVFELLQEMQREEKVRVNEVTVLNVLPACSGEHQLLSLKEIH 424
Query: 311 SIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIE 370
+ GF +KD + + NA +A + + ++
Sbjct: 425 GYAFRHGF------------------------------LKDELVA-NAFVAAYAKCSSLD 453
Query: 371 DARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIA 430
A ++F M+ + V SW+A+I +AQN P +L+LF M+D+G+ P+ T+ S+ A A
Sbjct: 454 CAERVFCGMEGKTVSSWNALIGAHAQNGFPGKSLDLFLVMMDSGMDPDRFTIGSLLLACA 513
Query: 431 SSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPW 490
L+ G+ H ++L N + L++ + +++ +Y +C S+ +F + ++ S+ W
Sbjct: 514 RLKFLRCGKEIHGFMLRNGLELDEFIGISLMSLYIQCSSMLLGKLIFDKMENK--SLVCW 571
Query: 491 NAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKS 550
N +I G + + L + + IK I GVL C + LG+ S
Sbjct: 572 NVMITGFSQNELPCEALDTFRQMLSGGIKPQEIAVTGVLGACSQVSALRLGKE-VHSFAL 630
Query: 551 VYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGN 605
++ D ++D+ + G +E ++ + + K D +W ++A IHG+
Sbjct: 631 KAHLSEDAFVTCALIDMYAKCGCMEQSQNIFDRVNEK-DEAVWNVIIAGYGIHGH 684
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 120/504 (23%), Positives = 217/504 (43%), Gaps = 109/504 (21%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E+ +++ L CS + ++IH F+ G + + N+ + YAK
Sbjct: 401 EVTVLNVLPACSGEHQLLSLKEIHGYAFRHGFLKDELVANAFVAAYAK------------ 448
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
CS+LD C A VF K S+ ++I AQN ++L++
Sbjct: 449 -CSSLD---C---------------AERVFCGMEGKTVSSWNALIGAHAQNGFPGKSLDL 489
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIK--LMIDGFVIISTNLLNMY 200
F M G+ P+ T+ S++ + L + + +HG +++ L +D F+ IS L+++Y
Sbjct: 490 FLVMMDSGMDPDRFTIGSLLLACARLKFLRCGKEIHGFMLRNGLELDEFIGIS--LMSLY 547
Query: 201 CVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMID 260
CSS++ + +FD+M+ +++V WNVM+ GF+
Sbjct: 548 IQCSSMLLGKLIFDKMENKSLVCWNVMITGFS---------------------------- 579
Query: 261 GYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDC 320
Q E EAL +R ML GI P ++ + ++ AC + A G ++HS +KA
Sbjct: 580 ---QNELPCEALDTFRQMLSGGIKPQEIAVTGVLGACSQVSALRLGKEVHSFALKAHLSE 636
Query: 321 YDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ 380
F+ +I YA CG + ++ F+ + A WN +IAG+
Sbjct: 637 DAFVTCALIDMYAKCGCMEQSQNIFDRVNEKDEAVWNVIIAGY----------------- 679
Query: 381 KRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRW 440
I G+ A+ELF M + G +P+ T + V A +G + EG
Sbjct: 680 ---------GIHGHGLK-----AIELFELMQNKGGRPDSFTFLGVLIACNHAGLVTEGL- 724
Query: 441 AHEYV--LNNSITLNDNLS--AAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICG 496
+Y+ + N + L A ++DM + G + A ++ + D S W++++
Sbjct: 725 --KYLGQMQNLYGVKPKLEHYACVVDMLGRAGQLTEALKLVNEMPDEPDS-GIWSSLLSS 781
Query: 497 LAMHGDANLTLKIYSDLEKRNIKL 520
+GD L+I ++ K+ ++L
Sbjct: 782 CRNYGD----LEIGEEVSKKLLEL 801
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 104/454 (22%), Positives = 187/454 (41%), Gaps = 93/454 (20%)
Query: 165 SVHLGGIWECRMLHGLVI---KLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNI 221
++H+G R +H LV KL D V++ST ++ MY C S ++R +FD KE+++
Sbjct: 107 NIHVG-----RKVHALVSASHKLRND--VVLSTRIIAMYSACGSPSDSRGVFDAAKEKDL 159
Query: 222 VSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAML-C 280
+N ++ GY + +A++++ +L
Sbjct: 160 FLYN-------------------------------ALLSGYSRNALFRDAISLFLELLSA 188
Query: 281 DGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINL 340
+AP++ + + AC G +H++ +KAG F+ +I Y CG +
Sbjct: 189 TDLAPDNFTLPCVAKACAGVADVELGEAVHALALKAGGFSDAFVGNALIAMYGKCGFVES 248
Query: 341 ARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQP 400
A FE ++ SWN+++ NG + +F + +IS
Sbjct: 249 AVKVFETMRNRNLVSWNSVMYACSENGGFGECCGVFKRL----------LIS-------- 290
Query: 401 NMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAI 460
+ G+ P+ TMV+V A A+ G ++ G H IT ++ ++
Sbjct: 291 ----------EEEGLVPDVATMVTVIPACAAVGEVRMGMVVHGLAFKLGITEEVTVNNSL 340
Query: 461 IDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEK-RNIK 519
+DMY+KCG + A +F + +V WN II G + GD ++ ++++ ++
Sbjct: 341 VDMYSKCGYLGEARALFD--MNGGKNVVSWNTIIWGYSKEGDFRGVFELLQEMQREEKVR 398
Query: 520 LNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLL---------GR 570
+N +T + VL C GE S+K ++ +H G + D L +
Sbjct: 399 VNEVTVLNVLPACS-------GEHQLLSLKEIHGYA--FRH-GFLKDELVANAFVAAYAK 448
Query: 571 AGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHG 604
L+ AE V M K V W L+ A +G
Sbjct: 449 CSSLDCAERVFCGMEGKT-VSSWNALIGAHAQNG 481
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 76/338 (22%), Positives = 145/338 (42%), Gaps = 42/338 (12%)
Query: 268 LSEALTMYRAMLCDG-IAPNDV---MIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDF 323
L++AL + + +G ++ +D+ I L+ ACG G ++H+++ + D
Sbjct: 69 LNDALNLLHSHAQNGTVSSSDISKEAIGILLRACGHHKNIHVGRKVHALVSASHKLRNDV 128
Query: 324 IQAT-IIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKR 382
+ +T II Y+ACG + +R F+ + + +NAL++G+ RN + DA LF
Sbjct: 129 VLSTRIIAMYSACGSPSDSRGVFDAAKEKDLFLYNALLSGYSRNALFRDAISLF------ 182
Query: 383 DVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAH 442
LEL + P+ T+ V A A ++ G H
Sbjct: 183 ---------------------LELLSA---TDLAPDNFTLPCVAKACAGVADVELGEAVH 218
Query: 443 EYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGD 502
L + + A+I MY KCG + +A +VF +R+R ++ WN+++ + +G
Sbjct: 219 ALALKAGGFSDAFVGNALIAMYGKCGFVESAVKVFETMRNR--NLVSWNSVMYACSENGG 276
Query: 503 ANLTLKIYSDL---EKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLK 559
++ L E+ + + T + V+ C G V +G + + ++
Sbjct: 277 FGECCGVFKRLLISEEEGLVPDVATMVTVIPACAAVGEVRMG-MVVHGLAFKLGITEEVT 335
Query: 560 HYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLL 597
+VD+ + G L +A + M +VV W T++
Sbjct: 336 VNNSLVDMYSKCGYLGEARALF-DMNGGKNVVSWNTII 372
>gi|224099171|ref|XP_002311390.1| predicted protein [Populus trichocarpa]
gi|222851210|gb|EEE88757.1| predicted protein [Populus trichocarpa]
Length = 594
Score = 298 bits (762), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 164/469 (34%), Positives = 261/469 (55%), Gaps = 37/469 (7%)
Query: 231 FAKAGLVELARELFERIP-SKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDG--IAPND 287
F G + A++LF+ + ++ + TMI Y EA Y MLCD + PND
Sbjct: 76 FDNLGSLNYAQKLFDTVDIPRNSFMYTTMIKAYANFGNPREAFAFYSRMLCDQRYVYPND 135
Query: 288 VMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLA-RLQFE 346
+ SAC + EG Q H+ ++K F+ +++ FY G + + R F+
Sbjct: 136 FTFTYVFSACSKFNGVFEGKQAHAQMIKFPFEFGVHSWNSLLDFYGKVGEVGIVVRRVFD 195
Query: 347 LGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQ---------- 396
+ SWN LI G++++G +++AR+LF+ M +RDV SW+ M+ GYA
Sbjct: 196 KIEGPDVVSWNCLINGYVKSGDLDEARRLFDEMPERDVVSWTIMLVGYADAGFLSEASCL 255
Query: 397 -NEQP--------------------NMALELFHGMVDAGVKPNEITMVSVFCAIASSGTL 435
+E P + ALELF M A VK +E+ + ++ A A G L
Sbjct: 256 FDEMPKRNLVSWSALIKGYIQIGCYSKALELFKEMQVAKVKMDEVIVTTLLSACARLGAL 315
Query: 436 KEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIIC 495
+GRW H Y+ + I ++ +LS A+IDMY+KCG I+ A++VF D+ V W+++I
Sbjct: 316 DQGRWLHMYIDKHGIKVDAHLSTALIDMYSKCGRIDMAWKVFQETGDKKVFV--WSSMIG 373
Query: 496 GLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVE 555
GLAMH +++++ + + I+ + IT+I +L+ C H+GLVD+G + F M +
Sbjct: 374 GLAMHSFGEKAIELFAKMIECGIEPSEITYINILAACTHSGLVDVGLQIFNRMVENQKPK 433
Query: 556 PDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKS 615
P ++HYGC+VDLLGRAG L DA V+ +MP+KAD IW LL+A ++H NVE+GE+ +
Sbjct: 434 PRMQHYGCIVDLLGRAGLLHDAFRVVETMPVKADPAIWRALLSACKLHRNVELGEQVGRI 493
Query: 616 LAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
L ++P + + VL SN+YA RW+ + +R+EM+ GM++ PG S +
Sbjct: 494 LIKMEPQNDMNYVLFSNVYAAVNRWDISGKLRREMKVRGMQKNPGCSSI 542
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 144/574 (25%), Positives = 244/574 (42%), Gaps = 115/574 (20%)
Query: 1 TPLDHFHSVFNSQ-KANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTF 59
+P+ + NSQ K +L+ D+ ++L+ + I Q+H+L+ K+ L +
Sbjct: 11 SPVPSKTTALNSQQKQHLRKPDHAISLLQNCKNPKDLI------QLHTLLIKTSLIKEKY 64
Query: 60 IQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPI-K 118
L+ +A FD+ +L N A+++FD I +
Sbjct: 65 AFGRLLLSFAS----------FDNLGSL------------------NYAQKLFDTVDIPR 96
Query: 119 CCVSYTSMIMGFAQNDCWREALEVFR----DMRILGVIPNEVTLASVISSSVHLGGIWEC 174
YT+MI +A REA + D R V PN+ T V S+ G++E
Sbjct: 97 NSFMYTTMIKAYANFGNPREAFAFYSRMLCDQRY--VYPNDFTFTYVFSACSKFNGVFEG 154
Query: 175 RMLHGLVIKL-------------------------------MIDGFVIISTN-LLNMYCV 202
+ H +IK I+G ++S N L+N Y
Sbjct: 155 KQAHAQMIKFPFEFGVHSWNSLLDFYGKVGEVGIVVRRVFDKIEGPDVVSWNCLINGYVK 214
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
L EAR LFDEM ER++VSW +ML G+A AG + A LF+ +P +++VSW +I GY
Sbjct: 215 SGDLDEARRLFDEMPERDVVSWTIMLVGYADAGFLSEASCLFDEMPKRNLVSWSALIKGY 274
Query: 263 LQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD 322
+Q+ S+AL +++ M + ++V++ L+SAC R A +G +H I K G
Sbjct: 275 IQIGCYSKALELFKEMQVAKVKMDEVIVTTLLSACARLGALDQGRWLHMYIDKHGIKVDA 334
Query: 323 FIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKR 382
+ +I Y+ CGRI++A F+ + W+++I G + E
Sbjct: 335 HLSTALIDMYSKCGRIDMAWKVFQETGDKKVFVWSSMIGGLAMHSFGEK----------- 383
Query: 383 DVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG-RWA 441
A+ELF M++ G++P+EIT +++ A SG + G +
Sbjct: 384 --------------------AIELFAKMIECGIEPSEITYINILAACTHSGLVDVGLQIF 423
Query: 442 HEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSP--WNAIICGLAM 499
+ V N I+D+ + G ++ AF V + P W A++ +
Sbjct: 424 NRMVENQKPKPRMQHYGCIVDLLGRAGLLHDAFRV---VETMPVKADPAIWRALLSACKL 480
Query: 500 HGDANL---TLKIYSDLEKRNIKLNSITFIGVLS 530
H + L +I +E +N +N + F V +
Sbjct: 481 HRNVELGEQVGRILIKMEPQN-DMNYVLFSNVYA 513
>gi|345505222|gb|AEN99835.1| chlororespiratory reduction 4, partial [Lepidium sativum]
Length = 597
Score = 298 bits (762), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 183/532 (34%), Positives = 289/532 (54%), Gaps = 45/532 (8%)
Query: 137 REALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNL 196
R +L +F M GV ++ +L+ V+ + LG + +HG + K + + + L
Sbjct: 87 RRSLFLFCLMLENGVSVDKFSLSLVLKACSRLGFVKAGMXIHGFLRKTGLWSDLFLQNCL 146
Query: 197 LNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPS--KDVVS 254
+ +Y C L +R +FD M +R+ VS+N M++G+ K GL+E ARELF+ +P K+++S
Sbjct: 147 IGLYLKCGCLGYSRQVFDRMPQRDSVSYNSMIDGYVKCGLIESARELFDLMPKEMKNLIS 206
Query: 255 WGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIV 314
W +I GY Q S+ + + + + P DLIS
Sbjct: 207 WNCLISGYAQT---SDGVNIASKLFSE--MPEK----DLIS------------------- 238
Query: 315 KAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQ 374
++I Y GRI A+ F++ + + +W +I G+ + G I A+
Sbjct: 239 ----------WNSMIDGYVKHGRIEDAKDLFDVMPRRDVITWATMIDGYAKLGFIHQAKT 288
Query: 375 LFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGM-VDAGVKPNEITMVSVFCAIASSG 433
LF+ + RDV ++++M++GY QN+ ALELF M ++ + P+E T+V V AIA G
Sbjct: 289 LFDQIPHRDVVAYNSMMAGYVQNKYHMEALELFIKMEKESHLSPDETTLVIVLSAIAQLG 348
Query: 434 TLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAI 493
L + H Y++ + L A+IDMY+KCGSI A VF + ++ ++ WNAI
Sbjct: 349 RLSKAMDMHFYIVKKQFFIGGKLGVALIDMYSKCGSIQHAMLVFKGLENK--NIDHWNAI 406
Query: 494 ICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYN 553
I GLA+HG + +E+ +IK + ITFIGVL+ C H+GLV G F+ M+ +
Sbjct: 407 IGGLAIHGLGGPAFDMLLQIERLSIKPDDITFIGVLNACSHSGLVKEGLLCFELMRRKHK 466
Query: 554 VEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAA 613
+EP L+HYGCMVD+L R+G +E A+ +I MP++ + VIW T L A H E+GE A
Sbjct: 467 IEPRLQHYGCMVDILSRSGSIELAKILIEKMPIEPNDVIWRTFLTACSHHKEFEMGELVA 526
Query: 614 KSLAGLQPSHGPSR-VLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
K L LQ + PS VLLSN+YA G W+D +R M++ ++++PG S +
Sbjct: 527 KHLI-LQAGYNPSSYVLLSNMYASCGMWKDVRRVRTMMKERKIQKIPGCSWI 577
Score = 171 bits (434), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 127/457 (27%), Positives = 216/457 (47%), Gaps = 77/457 (16%)
Query: 22 YELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMF 81
+ L+LV L+ CS V G IH + K+GL S+ F+QN LI LY KCG + ++ +F
Sbjct: 106 FSLSLV--LKACSRLGFVKAGMXIHGFLRKTGLWSDLFLQNCLIGLYLKCGCLGYSRQVF 163
Query: 82 DSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTP--IKCCVSYTSMIMGFAQ-NDCWRE 138
D D V+ N MI GY++ + ARE+FD P +K +S+ +I G+AQ +D
Sbjct: 164 DRMPQRDSVSYNSMIDGYVKCGLIESARELFDLMPKEMKNLISWNCLISGYAQTSDGVNI 223
Query: 139 ALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLN 198
A ++F +M P + ++ W MIDG+V
Sbjct: 224 ASKLFSEM------PEKDLIS------------WNS----------MIDGYV-------- 247
Query: 199 MYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTM 258
+ +A+ LFD M R++++W M++G+AK G + A+ LF++IP +DVV++ +M
Sbjct: 248 ---KHGRIEDAKDLFDVMPRRDVITWATMIDGYAKLGFIHQAKTLFDQIPHRDVVAYNSM 304
Query: 259 IDGYLQVERLSEALTMYRAMLCDG-IAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAG 317
+ GY+Q + EAL ++ M + ++P++ +V ++SA + + + +H IVK
Sbjct: 305 MAGYVQNKYHMEALELFIKMEKESHLSPDETTLVIVLSAIAQLGRLSKAMDMHFYIVKKQ 364
Query: 318 FDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFN 377
F + +I Y+ CG I A L F+ +I WNA+I G +G+ A +
Sbjct: 365 FFIGGKLGVALIDMYSKCGSIQHAMLVFKGLENKNIDHWNAIIGGLAIHGLGGPAFDMLL 424
Query: 378 NMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKE 437
+++ +KP++IT + V A + SG +KE
Sbjct: 425 QIER-------------------------------LSIKPDDITFIGVLNACSHSGLVKE 453
Query: 438 GRWAHEYV-LNNSITLNDNLSAAIIDMYAKCGSINTA 473
G E + + I ++D+ ++ GSI A
Sbjct: 454 GLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELA 490
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 101/383 (26%), Positives = 183/383 (47%), Gaps = 28/383 (7%)
Query: 236 LVELARELFER-----IP---SKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPND 287
L E AR +FE +P ++D W +I + +L ++ ML +G++ +
Sbjct: 46 LAEFARCVFEEHHVYSLPYGETEDPFLWNAVIKSHSHGTDPRRSLFLFCLMLENGVSVDK 105
Query: 288 VMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFEL 347
+ ++ AC R G+ IH + K G F+Q +I Y CG + +R F+
Sbjct: 106 FSLSLVLKACSRLGFVKAGMXIHGFLRKTGLWSDLFLQNCLIGLYLKCGCLGYSRQVFDR 165
Query: 348 GIKDHIASWNALIAGFIRNGMIEDARQLFNNMQK--RDVYSWSAMISGYAQ-NEQPNMAL 404
+ S+N++I G+++ G+IE AR+LF+ M K +++ SW+ +ISGYAQ ++ N+A
Sbjct: 166 MPQRDSVSYNSMIDGYVKCGLIESARELFDLMPKEMKNLISWNCLISGYAQTSDGVNIAS 225
Query: 405 ELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLS-AAIIDM 463
+LF M E ++S I G +K GR L + + D ++ A +ID
Sbjct: 226 KLFSEM-------PEKDLISWNSMI--DGYVKHGRIEDAKDLFDVMPRRDVITWATMIDG 276
Query: 464 YAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKR-NIKLNS 522
YAK G I+ A +F I R V +N+++ G + L+++ +EK ++ +
Sbjct: 277 YAKLGFIHQAKTLFDQIPHR--DVVAYNSMMAGYVQNKYHMEALELFIKMEKESHLSPDE 334
Query: 523 ITFIGVLSTCCHAG-LVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVI 581
T + VLS G L + +F +K + + L ++D+ + G ++ A V
Sbjct: 335 TTLVIVLSAIAQLGRLSKAMDMHFYIVKKQFFIGGKLG--VALIDMYSKCGSIQHAMLVF 392
Query: 582 RSMPMKADVVIWGTLLAASRIHG 604
+ + K ++ W ++ IHG
Sbjct: 393 KGLENK-NIDHWNAIIGGLAIHG 414
>gi|357440579|ref|XP_003590567.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479615|gb|AES60818.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1212
Score = 298 bits (762), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 186/652 (28%), Positives = 322/652 (49%), Gaps = 98/652 (15%)
Query: 13 QKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCG 72
Q+ ++++ Y VSAL+ C + G+ IH++I KS ++ ++ N+LI +YA CG
Sbjct: 243 QEVGVESNTY--TFVSALQACEGPTFIKIGRGIHAVILKSNHFTDVYVSNALIAMYANCG 300
Query: 73 LISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQ 132
++ DA VF K CVS+ +++ G Q
Sbjct: 301 -------------------------------QMEDAERVFKSMLFKDCVSWNTLLSGMVQ 329
Query: 133 NDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVII 192
ND + +A+ F+DM+ G P++V++ ++I++S + +H IK ID + I
Sbjct: 330 NDMYSDAINHFQDMQDSGQKPDQVSVLNMIAASGRSANLLAGMEVHAYAIKHGIDSNMHI 389
Query: 193 STNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDV 252
+L++MY C V+ FE +P KD+
Sbjct: 390 GNSLIDMYGKCCC-------------------------------VKYMGSAFEYMPEKDL 418
Query: 253 VSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSI 312
+SW T+I GY Q E +AL + R + + + + +MI ++ AC + +IH
Sbjct: 419 ISWTTIIAGYAQNECHLDALNLLRKVQLEKMDVDPMMIGSILLACSGLKSEKLIKEIHGY 478
Query: 313 IVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDA 372
++K G IQ I++ Y EL + D+ A
Sbjct: 479 VLKGGLADI-LIQNAIVNVYG------------ELALVDY-------------------A 506
Query: 373 RQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASS 432
R +F ++ +D+ SW++MI+ N ALELF+ +++ ++P+ IT+VSV A A+
Sbjct: 507 RHVFESINSKDIVSWTSMITCCVHNGLAIEALELFNSLIETNIEPDLITLVSVLYAAAAL 566
Query: 433 GTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNA 492
+LK+G+ H +++ L ++ +++DMYA+CG++ A +F +++ R + W +
Sbjct: 567 SSLKKGKEIHGFLIRKGFFLEGLIANSLVDMYARCGTMENARNIFNYVKQRDLIL--WTS 624
Query: 493 IICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVY 552
+I MHG + ++S + N+ + ITF+ +L C H+GLV G+++F+ MK+ Y
Sbjct: 625 MINANGMHGCGKDAIDLFSKMTDENVLPDHITFLALLYACSHSGLVVEGKQHFEIMKNEY 684
Query: 553 NVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERA 612
+EP +HY C+VDLL R+ LE+A +R+MP++ +W LL A RIH N ++GE A
Sbjct: 685 KLEPWPEHYACLVDLLARSNSLEEAYHFVRNMPIEPSAEVWCALLGACRIHSNNDLGEVA 744
Query: 613 AKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
AK L L + + VL+SN +A GRW D +R M+ +K+ PG S +
Sbjct: 745 AKKLLQLNTENSGNYVLVSNTFAADGRWNDVEEVRSIMKGNKLKKKPGCSWI 796
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 147/585 (25%), Positives = 247/585 (42%), Gaps = 117/585 (20%)
Query: 25 ALVSALRYCSAHIAVSQGQQIHSLIFKS-GLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
A AL C++H A+ QGQQ+H+ K+ + F+ +++Y KCG
Sbjct: 48 AYSQALELCASHKALPQGQQLHAHFLKTQNYLDSVFLDTKFVHMYGKCG----------- 96
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
DA +VFDK + ++ +MI + EA+E++
Sbjct: 97 --------------------SFYDAVKVFDKMSERTIFTWNAMIGACVSAGRYVEAIELY 136
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRM---LHGLVIKLMIDGFVIISTNLLNMY 200
++MR+LGV + T V+ + G E R+ +HG+ +K GFV + L+ MY
Sbjct: 137 KEMRVLGVSLDAFTFPCVLKAC---GAFKERRLGCEIHGVAVKCGYGGFVFVCNALIAMY 193
Query: 201 CVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMID 260
C L AR LFD +GL+E D VSW ++I
Sbjct: 194 AKCGDLGGARVLFD-------------------SGLME----------KDDPVSWNSIIS 224
Query: 261 GYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDC 320
++ EAL+++R M G+ N V + AC G IH++I+K+
Sbjct: 225 AHVGEGESLEALSLFRRMQEVGVESNTYTFVSALQACEGPTFIKIGRGIHAVILKSNHFT 284
Query: 321 YDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ 380
++ +I YA CG++ A F+ + SWN L++G ++N M DA F +MQ
Sbjct: 285 DVYVSNALIAMYANCGQMEDAERVFKSMLFKDCVSWNTLLSGMVQNDMYSDAINHFQDMQ 344
Query: 381 KRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRW 440
D+G KP++++++++ A S L G
Sbjct: 345 -------------------------------DSGQKPDQVSVLNMIAASGRSANLLAGME 373
Query: 441 AHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAM- 499
H Y + + I N ++ ++IDMY KC + F ++ ++ + W II G A
Sbjct: 374 VHAYAIKHGIDSNMHIGNSLIDMYGKCCCVKYMGSAFEYMPEK--DLISWTTIIAGYAQN 431
Query: 500 --HGDA-NLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVE- 555
H DA NL K+ LEK ++ IG + C +GL E+ K + Y ++
Sbjct: 432 ECHLDALNLLRKV--QLEKMDV---DPMMIGSILLAC-SGLK--SEKLIKEIHG-YVLKG 482
Query: 556 --PDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLA 598
D+ +V++ G ++ A V S+ K D+V W +++
Sbjct: 483 GLADILIQNAIVNVYGELALVDYARHVFESINSK-DIVSWTSMIT 526
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 107/267 (40%), Gaps = 49/267 (18%)
Query: 430 ASSGTLKEGRWAHEYVLNNSITLND-NLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVS 488
AS L +G+ H + L L+ L + MY KCGS A +VF + +RT +
Sbjct: 57 ASHKALPQGQQLHAHFLKTQNYLDSVFLDTKFVHMYGKCGSFYDAVKVFDKMSERT--IF 114
Query: 489 PWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLG-ERYFKS 547
WNA+I G +++Y ++ + L++ TF VL C LG E + +
Sbjct: 115 TWNAMIGACVSAGRYVEAIELYKEMRVLGVSLDAFTFPCVLKACGAFKERRLGCEIHGVA 174
Query: 548 MKSVYNVEPDLKHYGC--MVDLLGRAGQLEDAEEVIRSMPM-KADVVIWGTLLAAS---- 600
+K Y + C ++ + + G L A + S M K D V W ++++A
Sbjct: 175 VKCGYGGFV----FVCNALIAMYAKCGDLGGARVLFDSGLMEKDDPVSWNSIISAHVGEG 230
Query: 601 ---------RIHGNVEVGERAAKSLAGLQPSHGP-------------------SRVLLSN 632
R V V ++ LQ GP + V +SN
Sbjct: 231 ESLEALSLFRRMQEVGVESNTYTFVSALQACEGPTFIKIGRGIHAVILKSNHFTDVYVSN 290
Query: 633 ----IYADAGRWEDAFSIRKEM--RDC 653
+YA+ G+ EDA + K M +DC
Sbjct: 291 ALIAMYANCGQMEDAERVFKSMLFKDC 317
>gi|297743367|emb|CBI36234.3| unnamed protein product [Vitis vinifera]
Length = 906
Score = 298 bits (762), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 187/635 (29%), Positives = 304/635 (47%), Gaps = 97/635 (15%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
LR C +++G+++H + + G ES+ + N+LI +Y KCG I A
Sbjct: 202 LRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSA------------ 249
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
R VFD+ P + +S+ +MI G+ +ND E L +F MR
Sbjct: 250 -------------------RLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREF 290
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
V P+ +T+ SVIS+ LG R +HG VIK V ++ +L+ M+
Sbjct: 291 FVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMH--------- 341
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLS 269
+ G + A +F ++ KD+VSW MI GY +
Sbjct: 342 ----------------------SSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPE 379
Query: 270 EALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATII 329
+A+ Y M +G+ P+++ I ++SAC +G+ +H + G Y + ++I
Sbjct: 380 KAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLI 439
Query: 330 HFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSA 389
Y+ C I+ A ++F+ + ++V SW++
Sbjct: 440 DMYSKCR-------------------------------CIDKALEVFHRIPNKNVISWTS 468
Query: 390 MISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNS 449
+I G N + AL F M+ +KPN +T+VSV A A G L G+ H + L
Sbjct: 469 IILGLRLNYRSFEALFFFQQMI-LSLKPNSVTLVSVLSACARIGALSCGKEIHAHALRTG 527
Query: 450 ITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKI 509
+ + L A++DMY +CG + A+ F V+ WN ++ G A G L +++
Sbjct: 528 LGFDGFLPNALLDMYVRCGRMEPAWNQFNSCE---KDVASWNILLTGYAQQGKGGLAVEL 584
Query: 510 YSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLG 569
+ + + ++ + ITF +L C +G+V G YF+SM+ +++ P+LKHY +VDLLG
Sbjct: 585 FHKMIESDVNPDEITFTSLLCACSRSGMVTDGLEYFESMEHKFHIAPNLKHYASVVDLLG 644
Query: 570 RAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVL 629
RAG+LEDA E I+ MP+ D IWG LL A RI+ NVE+GE AA+ + + +L
Sbjct: 645 RAGRLEDAYEFIKKMPIDPDPAIWGALLNACRIYQNVELGELAAQHIFEMDTKSVGYYIL 704
Query: 630 LSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
L N+YAD+G+W++ +RK MR+ + PG S V
Sbjct: 705 LCNLYADSGKWDEVARVRKIMRENRLTVDPGCSWV 739
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 119/485 (24%), Positives = 210/485 (43%), Gaps = 101/485 (20%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+ + S + C A G+++H + K+G + + NSLI +++ G +A+ +F
Sbjct: 297 MTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSK 356
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
D V+ MISGY +N G + +A+E +
Sbjct: 357 MEFKDLVSWTAMISGYEKN--------------------------GLPE-----KAVETY 385
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
M GV+P+E+T+ASV+S+ LG + + MLH + + +VI++ +L++MY C
Sbjct: 386 TIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKC 445
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYL 263
+ +A +F + +N++SW ++I G
Sbjct: 446 RCIDKALEVFHRIPNKNVISWT-------------------------------SIILGLR 474
Query: 264 QVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDF 323
R EAL ++ M+ + PN V +V ++SAC R A G +IH+ ++ G F
Sbjct: 475 LNYRSFEALFFFQQMIL-SLKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGF 533
Query: 324 IQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRD 383
+ ++ Y CGR+ A QF KD +ASWN L+ G+
Sbjct: 534 LPNALLDMYVRCGRMEPAWNQFNSCEKD-VASWNILLTGY-------------------- 572
Query: 384 VYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHE 443
AQ + +A+ELFH M+++ V P+EIT S+ CA + SG + +G E
Sbjct: 573 -----------AQQGKGGLAVELFHKMIESDVNPDEITFTSLLCACSRSGMVTDGLEYFE 621
Query: 444 YVLNN-SITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSP--WNAIICGLAMH 500
+ + I N A+++D+ + G + A+E I+ P W A++ ++
Sbjct: 622 SMEHKFHIAPNLKHYASVVDLLGRAGRLEDAYEF---IKKMPIDPDPAIWGALLNACRIY 678
Query: 501 GDANL 505
+ L
Sbjct: 679 QNVEL 683
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 124/500 (24%), Positives = 209/500 (41%), Gaps = 84/500 (16%)
Query: 173 ECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFA 232
E +H V K + V + LL+M+ LVEA +F +M ER++ SWNV++ G+A
Sbjct: 112 EGSRVHSYVSKTVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYA 171
Query: 233 KAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVD 292
KAG + EAL +Y ML GI P+
Sbjct: 172 KAGYFD-------------------------------EALNLYHRMLWVGIRPDVYTFPC 200
Query: 293 LISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDH 352
++ CG G ++H +++ GF+ + +I Y CG I ARL F+ +
Sbjct: 201 VLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRD 260
Query: 353 IASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVD 412
SWNA+I+G+ N + + +LF M+ E F
Sbjct: 261 RISWNAMISGYFENDVCLEGLRLFFMMR------------------------EFF----- 291
Query: 413 AGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINT 472
V P+ +TM SV A + G + GR H YV+ +++ ++I M++ G +
Sbjct: 292 --VDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDE 349
Query: 473 AFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTC 532
A VF + + + W A+I G +G ++ Y+ +E + + IT VLS C
Sbjct: 350 AEMVFSKMEFK--DLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSAC 407
Query: 533 CHAGLVDLGERYFKSMKSVYNVEPDLKHY----GCMVDLLGRAGQLEDAEEVIRSMPMKA 588
GL+D G M + L Y ++D+ + ++ A EV +P K
Sbjct: 408 AGLGLLDKG-----IMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNK- 461
Query: 589 DVVIWGTLLAASRIHGNVEVGERAAKSLAGLQP---SHGPSRVLLSNIYADAGRWEDAFS 645
+V+ W +++ R++ R+ ++L Q S P+ V L ++ + R A S
Sbjct: 462 NVISWTSIILGLRLN------YRSFEALFFFQQMILSLKPNSVTLVSVLSACARI-GALS 514
Query: 646 IRKEMRDCGMKRLPGFSGVV 665
KE+ ++ GF G +
Sbjct: 515 CGKEIHAHALRTGLGFDGFL 534
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 139/287 (48%), Gaps = 45/287 (15%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E+ + S L C+ + +G +H ++GL S + NSLI++Y+KC I +
Sbjct: 397 EITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDK------ 450
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
A EVF + P K +S+TS+I+G N EAL
Sbjct: 451 -------------------------ALEVFHRIPNKNVISWTSIILGLRLNYRSFEALFF 485
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIK--LMIDGFVIISTNLLNMY 200
F+ M IL + PN VTL SV+S+ +G + + +H ++ L DGF + LL+MY
Sbjct: 486 FQQM-ILSLKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGF--LPNALLDMY 542
Query: 201 CVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDV----VSWG 256
C + A + F+ E+++ SWN++L G+A+ G LA ELF ++ DV +++
Sbjct: 543 VRCGRMEPAWNQFNSC-EKDVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDEITFT 601
Query: 257 TMIDGYLQVERLSEALTMYRAMLCD-GIAPN---DVMIVDLISACGR 299
+++ + +++ L + +M IAPN +VDL+ GR
Sbjct: 602 SLLCACSRSGMVTDGLEYFESMEHKFHIAPNLKHYASVVDLLGRAGR 648
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 86/340 (25%), Positives = 152/340 (44%), Gaps = 41/340 (12%)
Query: 268 LSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQAT 327
L +AL +M ++ + + L+ C A EG ++HS + K
Sbjct: 75 LEKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSK------------ 122
Query: 328 IIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSW 387
+ RL LG NAL++ F+R G + +A +F M +RD++SW
Sbjct: 123 -----------TVTRLGVRLG--------NALLSMFVRFGDLVEAWYVFGKMAERDLFSW 163
Query: 388 SAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLN 447
+ ++ GYA+ + AL L+H M+ G++P+ T V L GR H +V+
Sbjct: 164 NVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIR 223
Query: 448 NSITLNDNLSAAIIDMYAKCGSINTAFEVFYHI--RDRTTSVSPWNAIICGLAMHGDANL 505
+ ++ A+I MY KCG I +A VF + RDR + WNA+I G +
Sbjct: 224 YGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDRIS----WNAMISGYFENDVCLE 279
Query: 506 TLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLG-ERYFKSMKSVYNVEPDLKHYGCM 564
L+++ + + + + +T V+S C G LG E + +K+ + E + + +
Sbjct: 280 GLRLFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSVNN--SL 337
Query: 565 VDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHG 604
+ + G ++AE V M K D+V W +++ +G
Sbjct: 338 IQMHSSVGCWDEAEMVFSKMEFK-DLVSWTAMISGYEKNG 376
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 119/242 (49%), Gaps = 20/242 (8%)
Query: 6 FHSVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLI 65
F ++F Q+ L + LVS L C+ A+S G++IH+ ++GL + F+ N+L+
Sbjct: 480 FEALFFFQQMILSLKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPNALL 539
Query: 66 NLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDK------TPIKC 119
++Y +CG + A + F+SC D + NI+++GY + + A E+F K P +
Sbjct: 540 DMYVRCGRMEPAWNQFNSCEK-DVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDE- 597
Query: 120 CVSYTSMIMGFAQNDCWREALEVFRDMR-ILGVIPNEVTLASVISSSVHLGGIWECRMLH 178
+++TS++ +++ + LE F M + PN ASV+ LG +
Sbjct: 598 -ITFTSLLCACSRSGMVTDGLEYFESMEHKFHIAPNLKHYASVVDL---LGRAGRLEDAY 653
Query: 179 GLVIKLMIDGFVIISTNLLNMYCVCSSLVE-----ARSLFDEMKERNIVSWNVMLNGFAK 233
+ K+ ID I LLN C VE A+ +F EM +++ + ++ N +A
Sbjct: 654 EFIKKMPIDPDPAIWGALLNA-CRIYQNVELGELAAQHIF-EMDTKSVGYYILLCNLYAD 711
Query: 234 AG 235
+G
Sbjct: 712 SG 713
>gi|357439099|ref|XP_003589826.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478874|gb|AES60077.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 526
Score = 298 bits (762), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 155/364 (42%), Positives = 231/364 (63%), Gaps = 9/364 (2%)
Query: 303 FGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQF-ELGIKDHIASWNALIA 361
FG G QIH + V G D + +++I Y+ C + AR F E G + NA+I
Sbjct: 128 FGLGKQIHCVGVVTGLDKNVSVCSSLIQMYS-CYDVCSARKLFDEFGGNGCV--LNAMIV 184
Query: 362 GFIRNGMIEDARQLFNNMQKRD--VYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNE 419
+++ G + +AR+LF++M +RD V+SW+AMISGY Q PN A++LF M VKP+E
Sbjct: 185 AYVKVGDVSNARKLFDSMLERDKDVFSWTAMISGYTQAHNPNEAIKLFRRMQLENVKPDE 244
Query: 420 ITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYH 479
I +++V A A G L G W H Y+ + ++ L ++IDMYAK G+I A E+F +
Sbjct: 245 IAILAVLSACADLGALHLGEWIHNYIEKHKLSKIVPLYNSLIDMYAKSGNIRKALELFEN 304
Query: 480 IRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRN-IKLNSITFIGVLSTCCHAGLV 538
++ +T + W +I GLA+HG L+++S +EK + +K N +TFI +LS C H GLV
Sbjct: 305 MKHKT--IITWTTMIAGLALHGLGKEALRVFSCMEKEDRVKPNEVTFIAILSACSHVGLV 362
Query: 539 DLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLA 598
+LG YF SM+S Y +EP ++HYGCM+DLLGRAG L++A+E++ MP +A+ IWG+LLA
Sbjct: 363 ELGRDYFTSMRSRYGIEPKIEHYGCMIDLLGRAGHLQEAKEMVLRMPFEANAAIWGSLLA 422
Query: 599 ASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRL 658
AS G+ E+ E A + L L+P H + LLSN YA GRW ++ +RK M+D G++++
Sbjct: 423 ASTRCGDAELAEEALRHLTVLEPGHCGNYSLLSNTYASLGRWNESRMVRKVMQDAGVEKV 482
Query: 659 PGFS 662
PG S
Sbjct: 483 PGVS 486
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 99/370 (26%), Positives = 166/370 (44%), Gaps = 36/370 (9%)
Query: 139 ALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLN 198
A+ +FR +R LG+ + +L V+ S V L + +H + + +D V + ++L+
Sbjct: 96 AVSIFRSVRRLGLSFDSYSLPYVLKSVVCLNDFGLGKQIHCVGVVTGLDKNVSVCSSLIQ 155
Query: 199 MYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERI--PSKDVVSWG 256
MY C + AR LFDE V N M+ + K G V AR+LF+ + KDV SW
Sbjct: 156 MYS-CYDVCSARKLFDEFGGNGCV-LNAMIVAYVKVGDVSNARKLFDSMLERDKDVFSWT 213
Query: 257 TMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKA 316
MI GY Q +EA+ ++R M + + P+++ I+ ++SAC A G IH+ I K
Sbjct: 214 AMISGYTQAHNPNEAIKLFRRMQLENVKPDEIAILAVLSACADLGALHLGEWIHNYIEKH 273
Query: 317 GFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLF 376
+ ++I YA G I A FE I +W +IAG +G+ ++A ++F
Sbjct: 274 KLSKIVPLYNSLIDMYAKSGNIRKALELFENMKHKTIITWTTMIAGLALHGLGKEALRVF 333
Query: 377 NNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLK 436
+ M+K D VKPNE+T +++ A + G ++
Sbjct: 334 SCMEKED------------------------------RVKPNEVTFIAILSACSHVGLVE 363
Query: 437 EGR-WAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIIC 495
GR + I +ID+ + G + A E+ + + + W +++
Sbjct: 364 LGRDYFTSMRSRYGIEPKIEHYGCMIDLLGRAGHLQEAKEMVLRMPFEANA-AIWGSLLA 422
Query: 496 GLAMHGDANL 505
GDA L
Sbjct: 423 ASTRCGDAEL 432
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 96/393 (24%), Positives = 179/393 (45%), Gaps = 61/393 (15%)
Query: 42 GQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIR 101
G+QIH + +GL+ N + +SLI +Y+ C + A+ +FD + N MI Y++
Sbjct: 131 GKQIHCVGVVTGLDKNVSVCSSLIQMYS-CYDVCSARKLFDEFGG-NGCVLNAMIVAYVK 188
Query: 102 NDRLNDAREVFDK--TPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLA 159
+++AR++FD K S+T+MI G+ Q EA+++FR M++ V P+E+ +
Sbjct: 189 VGDVSNARKLFDSMLERDKDVFSWTAMISGYTQAHNPNEAIKLFRRMQLENVKPDEIAIL 248
Query: 160 SVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKER 219
+V+S+ LG + +H + K + V + +L++MY ++ +A LF+ MK +
Sbjct: 249 AVLSACADLGALHLGEWIHNYIEKHKLSKIVPLYNSLIDMYAKSGNIRKALELFENMKHK 308
Query: 220 NIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAML 279
I++W M+ G A GL + A +F + +D V
Sbjct: 309 TIITWTTMIAGLALHGLGKEALRVFSCMEKEDRVK------------------------- 343
Query: 280 CDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDF------IQATIIHF-- 331
PN+V + ++SAC H +V+ G D + I+ I H+
Sbjct: 344 -----PNEVTFIAILSACS-----------HVGLVELGRDYFTSMRSRYGIEPKIEHYGC 387
Query: 332 ----YAACGRINLAR-LQFELGIKDHIASWNALIAGFIRNG---MIEDARQLFNNMQKRD 383
G + A+ + + + + A W +L+A R G + E+A + ++
Sbjct: 388 MIDLLGRAGHLQEAKEMVLRMPFEANAAIWGSLLAASTRCGDAELAEEALRHLTVLEPGH 447
Query: 384 VYSWSAMISGYAQNEQPNMALELFHGMVDAGVK 416
++S + + YA + N + + M DAGV+
Sbjct: 448 CGNYSLLSNTYASLGRWNESRMVRKVMQDAGVE 480
>gi|147852347|emb|CAN80116.1| hypothetical protein VITISV_032528 [Vitis vinifera]
Length = 505
Score = 297 bits (761), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 161/431 (37%), Positives = 242/431 (56%), Gaps = 36/431 (8%)
Query: 235 GLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLI 294
G + AR L +V SW +I Y + EA+ Y M GI+P+ + L+
Sbjct: 67 GNLNHARVLLSGSEKSEVSSWNDLIRSYATRDSPREAIGAYLEMRSLGISPDKLTFPILL 126
Query: 295 SACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIA 354
AC AF EG +I ++K G DC ++Q T+IHFY +C RI
Sbjct: 127 KACAXISAFNEGRKIQVDVMKHGLDCNVYVQNTMIHFYGSCKRI---------------- 170
Query: 355 SWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAG 414
DAR++F+ M R V SW+A++S NE N + LF M +G
Sbjct: 171 ---------------RDARRMFDEMSYRTVVSWNAVLSACVDNEWLNDSFGLFVKMRGSG 215
Query: 415 VKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAF 474
P+E TMV + A + G L GRW H V+ + +N L A++DMYAKCG++ A
Sbjct: 216 FDPDETTMVILLSACSELGNLSFGRWVHSQVIEKGMVVNCRLGTALVDMYAKCGAVCEAS 275
Query: 475 EVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCH 534
VF+ + +R +V W+A+I GLA HG A L+++ +++ +I N +TF+GVL C H
Sbjct: 276 LVFHRMLER--NVWTWSAMILGLAQHGFAKEALELFPKMKQSSISPNYVTFLGVLCACSH 333
Query: 535 AGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWG 594
AGLVD G R+F M+ V+ +EP + HYG MVD+L RAG+L++A I +MP++AD V+W
Sbjct: 334 AGLVDDGYRFFHDMEYVHGIEPMMIHYGAMVDILSRAGRLKEAYNFILNMPVEADPVVWR 393
Query: 595 TLLAASRIHG---NVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMR 651
TLL+A IHG N VG++ K L L+P + V+++N+YA+ G+W+ A ++R+ M+
Sbjct: 394 TLLSACTIHGINDNDGVGDKVRKRLLELEPRRSGNFVMVANMYAEVGKWDKAANVRRTMK 453
Query: 652 DCGMKRLPGFS 662
D G+K++ G S
Sbjct: 454 DTGLKKMAGES 464
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 94/449 (20%), Positives = 185/449 (41%), Gaps = 68/449 (15%)
Query: 105 LNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISS 164
LN AR + + S+ +I +A D REA+ + +MR LG+ P+++T ++ +
Sbjct: 69 LNHARVLLSGSEKSEVSSWNDLIRSYATRDSPREAIGAYLEMRSLGISPDKLTFPILLKA 128
Query: 165 SVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSW 224
+ E R + V+K +D V + +++ Y C + +AR
Sbjct: 129 CAXISAFNEGRKIQVDVMKHGLDCNVYVQNTMIHFYGSCKRIRDAR-------------- 174
Query: 225 NVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIA 284
+F+ + + VVSW ++ + E L+++ ++ M G
Sbjct: 175 -----------------RMFDEMSYRTVVSWNAVLSACVDNEWLNDSFGLFVKMRGSGFD 217
Query: 285 PNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQ 344
P++ +V L+SAC G +HS +++ G + ++ YA CG + A L
Sbjct: 218 PDETTMVILLSACSELGNLSFGRWVHSQVIEKGMVVNCRLGTALVDMYAKCGAVCEASLV 277
Query: 345 FELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMAL 404
F ++ ++ +W+A+I G ++G ++ AL
Sbjct: 278 FHRMLERNVWTWSAMILGLAQHGFAKE-------------------------------AL 306
Query: 405 ELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG-RWAHEYVLNNSITLNDNLSAAIIDM 463
ELF M + + PN +T + V CA + +G + +G R+ H+ + I A++D+
Sbjct: 307 ELFPKMKQSSISPNYVTFLGVLCACSHAGLVDDGYRFFHDMEYVHGIEPMMIHYGAMVDI 366
Query: 464 YAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLN-- 521
++ G + A+ ++ V W ++ +HG N + + KR ++L
Sbjct: 367 LSRAGRLKEAYNFILNMPVEADPVV-WRTLLSACTIHG-INDNDGVGDKVRKRLLELEPR 424
Query: 522 -SITFIGVLSTCCHAGLVDLGERYFKSMK 549
S F+ V + G D ++MK
Sbjct: 425 RSGNFVMVANMYAEVGKWDKAANVRRTMK 453
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/408 (21%), Positives = 168/408 (41%), Gaps = 76/408 (18%)
Query: 20 SDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKS 79
S +L L+ C+ A ++G++I + K GL+ N ++QN++I+ Y C
Sbjct: 116 SPDKLTFPILLKACAXISAFNEGRKIQVDVMKHGLDCNVYVQNTMIHFYGSC-------- 167
Query: 80 MFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREA 139
R+ DAR +FD+ + VS+ +++ N+ ++
Sbjct: 168 -----------------------KRIRDARRMFDEMSYRTVVSWNAVLSACVDNEWLNDS 204
Query: 140 LEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVI---ISTNL 196
+F MR G P+E T+ ++S+ LG + R +H VI+ G V+ + T L
Sbjct: 205 FGLFVKMRGSGFDPDETTMVILLSACSELGNLSFGRWVHSQVIE---KGMVVNCRLGTAL 261
Query: 197 LNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWG 256
++MY C ++ EA +F M ERN+ +W+ M+ G A+ G + A ELF ++
Sbjct: 262 VDMYAKCGAVCEASLVFHRMLERNVWTWSAMILGLAQHGFAKEALELFPKMKQSS----- 316
Query: 257 TMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQ-IHSIIVK 315
I+PN V + ++ AC A +G + H +
Sbjct: 317 --------------------------ISPNYVTFLGVLCACSHAGLVDDGYRFFHDMEYV 350
Query: 316 AGFDCYDFIQATIIHFYAACGRINLA-RLQFELGIKDHIASWNALIAGFI------RNGM 368
G + ++ + GR+ A + ++ W L++ +G+
Sbjct: 351 HGIEPMMIHYGAMVDILSRAGRLKEAYNFILNMPVEADPVVWRTLLSACTIHGINDNDGV 410
Query: 369 IEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVK 416
+ R+ ++ R ++ + + YA+ + + A + M D G+K
Sbjct: 411 GDKVRKRLLELEPRRSGNFVMVANMYAEVGKWDKAANVRRTMKDTGLK 458
>gi|359480463|ref|XP_003632466.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like, partial [Vitis vinifera]
Length = 621
Score = 297 bits (761), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 167/511 (32%), Positives = 268/511 (52%), Gaps = 34/511 (6%)
Query: 153 PNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSL 212
P+ T ++++ + L + E +H V+IS +L+MY C+SLV A+ L
Sbjct: 87 PSAATYSTLLQLCLQLRALDEGMKVHAHTKTSGFVPGVVISNRILDMYIKCNSLVNAKRL 146
Query: 213 FDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEAL 272
FDEM ER++ SWN+M++G+AKAG ++ AR+LF+++ +D SW M GY++ ++ EAL
Sbjct: 147 FDEMAERDLCSWNIMISGYAKAGRLQEARKLFDQMTERDNFSWTAMTSGYVRHDQHEEAL 206
Query: 273 TMYRAML-CDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHF 331
++RAM + N + ++A + G +IH I++ G D + + +
Sbjct: 207 ELFRAMQRHENFKCNKFTMSSALAASAAIQSLHLGKEIHGHILRIGLDLDGVVWSALSDM 266
Query: 332 YAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMI 391
Y CG I +AR +F+ RDV SW+AMI
Sbjct: 267 YGKCGSIG-------------------------------EARHIFDKTVDRDVVSWTAMI 295
Query: 392 SGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSIT 451
Y + + LF ++ +G+ PNE T V A A + G+ H Y+
Sbjct: 296 DRYFKEGRREEGFALFSDLLKSGIWPNEFTFSGVLNACADHAAEELGKQVHGYMTRIGFD 355
Query: 452 LNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYS 511
+ ++ ++ MY KCG+I A VF + R VS W ++I G A +G + L+ +
Sbjct: 356 PSSFAASTLVHMYTKCGNIKNARRVFNGM-PRPDLVS-WTSLISGYAQNGQPDEALQFFE 413
Query: 512 DLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRA 571
L K + + ITF+GVLS C HAGLVD G YF S+K + + HY C++DLL R+
Sbjct: 414 LLLKSGTQPDHITFVGVLSACTHAGLVDKGLEYFDSIKEKHGLTHTADHYACLIDLLSRS 473
Query: 572 GQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLS 631
G+L++AE++I MP++ D +W +LL RIHGN+++ +RAA++L ++P + + L+
Sbjct: 474 GRLQEAEDIIDKMPIEPDKFLWASLLGGCRIHGNLKLAKRAAEALFEIEPENPATYTTLA 533
Query: 632 NIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
NIYA AG W +RK M G+ + PG S
Sbjct: 534 NIYATAGLWGGVAEVRKVMDARGVVKKPGLS 564
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 130/487 (26%), Positives = 227/487 (46%), Gaps = 83/487 (17%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
L+ C A+ +G ++H+ SG I N ++++Y KC + AK +FD + D
Sbjct: 96 LQLCLQLRALDEGMKVHAHTKTSGFVPGVVISNRILDMYIKCNSLVNAKRLFDEMAERDL 155
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDM-RI 148
+ NIMISGY + RL +AR++FD+ + S+T+M G+ ++D EALE+FR M R
Sbjct: 156 CSWNIMISGYAKAGRLQEARKLFDQMTERDNFSWTAMTSGYVRHDQHEEALELFRAMQRH 215
Query: 149 LGVIPNEVTLASVIS-----SSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
N+ T++S ++ S+HLG + +HG ++++ +D ++ + L +MY C
Sbjct: 216 ENFKCNKFTMSSALAASAAIQSLHLG-----KEIHGHILRIGLDLDGVVWSALSDMYGKC 270
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYL 263
S+ EAR +FD+ +R++VSW MID Y
Sbjct: 271 GSIGEARHIFDKTVDRDVVSWTA-------------------------------MIDRYF 299
Query: 264 QVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDF 323
+ R E ++ +L GI PN+ +++AC A G Q+H + + GFD F
Sbjct: 300 KEGRREEGFALFSDLLKSGIWPNEFTFSGVLNACADHAAEELGKQVHGYMTRIGFDPSSF 359
Query: 324 IQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRD 383
+T++H Y CG I AR F + + SW +LI+G+ +NG
Sbjct: 360 AASTLVHMYTKCGNIKNARRVFNGMPRPDLVSWTSLISGYAQNG---------------- 403
Query: 384 VYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG-RWAH 442
QP+ AL+ F ++ +G +P+ IT V V A +G + +G +
Sbjct: 404 ---------------QPDEALQFFELLLKSGTQPDHITFVGVLSACTHAGLVDKGLEYFD 448
Query: 443 EYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSP----WNAIICGLA 498
+ +T + A +ID+ ++ G + A ++ + + P W +++ G
Sbjct: 449 SIKEKHGLTHTADHYACLIDLLSRSGRLQEAEDIIDKM-----PIEPDKFLWASLLGGCR 503
Query: 499 MHGDANL 505
+HG+ L
Sbjct: 504 IHGNLKL 510
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 105/252 (41%), Gaps = 50/252 (19%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E L C+ H A G+Q+H + + G + ++F ++L+++Y KCG I A+ +F+
Sbjct: 323 EFTFSGVLNACADHAAEELGKQVHGYMTRIGFDPSSFAASTLVHMYTKCGNIKNARRVFN 382
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
D V+ +ISGY AQN EAL+
Sbjct: 383 GMPRPDLVSWTSLISGY-------------------------------AQNGQPDEALQF 411
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWE-------CRMLHGLVIKLMIDGFVIISTN 195
F + G P+ +T V+S+ H G + + + HGL D +
Sbjct: 412 FELLLKSGTQPDHITFVGVLSACTHAGLVDKGLEYFDSIKEKHGLT--HTADHYAC---- 465
Query: 196 LLNMYCVCSSLVEARSLFDEMK-ERNIVSWNVMLNGFAKAGLVELARE----LFERIPSK 250
L+++ L EA + D+M E + W +L G G ++LA+ LFE I +
Sbjct: 466 LIDLLSRSGRLQEAEDIIDKMPIEPDKFLWASLLGGCRIHGNLKLAKRAAEALFE-IEPE 524
Query: 251 DVVSWGTMIDGY 262
+ ++ T+ + Y
Sbjct: 525 NPATYTTLANIY 536
Score = 39.3 bits (90), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 47/108 (43%), Gaps = 2/108 (1%)
Query: 410 MVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGS 469
++D +P+ T ++ L EG H + + +S I+DMY KC S
Sbjct: 80 ILDHVDRPSAATYSTLLQLCLQLRALDEGMKVHAHTKTSGFVPGVVISNRILDMYIKCNS 139
Query: 470 INTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRN 517
+ A +F + +R + WN +I G A G K++ + +R+
Sbjct: 140 LVNAKRLFDEMAER--DLCSWNIMISGYAKAGRLQEARKLFDQMTERD 185
>gi|255559709|ref|XP_002520874.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540005|gb|EEF41583.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 833
Score = 297 bits (761), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 173/641 (26%), Positives = 317/641 (49%), Gaps = 97/641 (15%)
Query: 25 ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSC 84
+ L C VS G+Q+H K G E + ++ SL+ +Y KC +I A+
Sbjct: 243 SFTCTLSACGQGEFVSFGKQVHCDAIKVGFEDDPYVHTSLLTMYGKCQMIESAE------ 296
Query: 85 STLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFR 144
+VF++ P K + ++I + N +AL +++
Sbjct: 297 -------------------------KVFNEVPDKEIELWNALISAYVGNGYAYDALRIYK 331
Query: 145 DMRILGVIPNEVTLASVISSSVHLGGIWEC-RMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
M++ V+ + T+ +V++SS + G+++ R++H ++K + + I + LL MY
Sbjct: 332 QMKLCTVLSDSFTILNVLTSS-SMAGLYDLGRLIHTEIVKRPLQSSITIQSALLTMYSKF 390
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYL 263
A S+F MKER DVV+WG++I G+
Sbjct: 391 GDSNYANSIFSTMKER-------------------------------DVVAWGSVISGFC 419
Query: 264 QVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDF 323
Q + EAL +RAM D + P+ ++ +ISAC G IH ++K+G F
Sbjct: 420 QNRKYKEALDFFRAMEADLVKPDSDIMASIISACTGLEKVDLGCTIHGFVIKSGLQLDVF 479
Query: 324 IQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRD 383
+ ++++ Y+ + G E A +F++M ++
Sbjct: 480 VASSLLDMYS-------------------------------KFGFPERAGNIFSDMPLKN 508
Query: 384 VYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHE 443
+ +W+++IS Y +N P++++ LF ++ + P+ ++ SV AI+S L +G+ H
Sbjct: 509 LVAWNSIISCYCRNNLPDLSINLFSQVLRNDLYPDSVSFTSVLAAISSVAALLKGKSVHG 568
Query: 444 YVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDA 503
Y++ I + + +IDMY KCG + A +F I ++ ++ WN++I G HG+
Sbjct: 569 YLVRLWIPFDLQVENTLIDMYIKCGLLKYAQHIFERISEK--NLVAWNSMIGGYGSHGEC 626
Query: 504 NLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGC 563
+ ++++ ++ IK + +TF+ +LS+C H+GL++ G F+ MK + +EP ++HY
Sbjct: 627 SKAIELFDEMRSSGIKPDDVTFLSLLSSCNHSGLIEEGLHLFEMMKMKFGIEPRMEHYVN 686
Query: 564 MVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSH 623
+VDL GRAG L DA +++MP++ D IW +LL + +IH N+E+GE A L ++PS
Sbjct: 687 IVDLYGRAGCLGDAYSFVKNMPVEPDRSIWLSLLCSCKIHLNLELGEMVANKLLNMEPSK 746
Query: 624 GPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
G + V L N+Y +A W+ ++R M++ G+K+ PG S +
Sbjct: 747 GSNYVQLLNLYGEAELWDRTANLRASMKEKGLKKTPGCSWI 787
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 136/579 (23%), Positives = 242/579 (41%), Gaps = 127/579 (21%)
Query: 28 SALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTL 87
S L+ C++ + G+ IHS I +GL S+ +I +SLIN+Y KCG +
Sbjct: 58 SLLKACASLSNLQYGKTIHSSIITTGLHSDQYITSSLINIYVKCGTFT------------ 105
Query: 88 DPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVS------YTSMIMGFAQNDCWREALE 141
DA +VFD+ P K VS + S+I G+ + E +
Sbjct: 106 -------------------DAVKVFDQLP-KSGVSVDDVTIWNSIIDGYFRFGQLEEGMV 145
Query: 142 VFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYC 201
F M+ G E + +H +++ M++ + T L++ Y
Sbjct: 146 QFGRMQS--------------------SGYKEGKQIHSYIVRNMLNFDPFLETALIDTYF 185
Query: 202 VCSSLVEARSLFDEMKER-NIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMID 260
C EAR LF ++K+R NIV+WNVM+ GF + GL E + E + +++
Sbjct: 186 KCGRPTEARYLFKKLKDRSNIVAWNVMIGGFGENGLWENSLEYYLLAKTEN--------- 236
Query: 261 GYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDC 320
V+ +S + T C +SACG+ G Q+H +K GF+
Sbjct: 237 ----VKVVSSSFT------CT------------LSACGQGEFVSFGKQVHCDAIKVGFED 274
Query: 321 YDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ 380
++ +++ Y C I A F I WNALI+ ++ NG DA +++ M+
Sbjct: 275 DPYVHTSLLTMYGKCQMIESAEKVFNEVPDKEIELWNALISAYVGNGYAYDALRIYKQMK 334
Query: 381 KRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRW 440
V S + T+++V + + +G GR
Sbjct: 335 LCTVLS-------------------------------DSFTILNVLTSSSMAGLYDLGRL 363
Query: 441 AHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMH 500
H ++ + + + +A++ MY+K G N A +F +++R V W ++I G +
Sbjct: 364 IHTEIVKRPLQSSITIQSALLTMYSKFGDSNYANSIFSTMKER--DVVAWGSVISGFCQN 421
Query: 501 GDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLG-ERYFKSMKSVYNVEPDLK 559
L + +E +K +S ++S C VDLG + +KS ++ D+
Sbjct: 422 RKYKEALDFFRAMEADLVKPDSDIMASIISACTGLEKVDLGCTIHGFVIKS--GLQLDVF 479
Query: 560 HYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLA 598
++D+ + G E A + MP+K ++V W ++++
Sbjct: 480 VASSLLDMYSKFGFPERAGNIFSDMPLK-NLVAWNSIIS 517
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 102/477 (21%), Positives = 193/477 (40%), Gaps = 91/477 (19%)
Query: 127 IMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMI 186
I Q + EAL+++ V T S++ + L + + +H +I +
Sbjct: 28 IKSLVQQRQYIEALKLYTKSP---VYTTRFTYPSLLKACASLSNLQYGKTIHSSIITTGL 84
Query: 187 DGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFER 246
I+++L+N+Y C + +A +FD++ K+G
Sbjct: 85 HSDQYITSSLINIYVKCGTFTDAVKVFDQL---------------PKSG----------- 118
Query: 247 IPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEG 306
+ DV W ++IDGY + +L E + + M G + EG
Sbjct: 119 VSVDDVTIWNSIIDGYFRFGQLEEGMVQFGRMQSSG--------------------YKEG 158
Query: 307 LQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQF-ELGIKDHIASWNALIAGFIR 365
QIHS IV+ + F++ +I Y CGR AR F +L + +I +WN +I GF
Sbjct: 159 KQIHSYIVRNMLNFDPFLETALIDTYFKCGRPTEARYLFKKLKDRSNIVAWNVMIGGFGE 218
Query: 366 NGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSV 425
NG+ E++ + + + +V ++ S
Sbjct: 219 NGLWENSLEYYLLAKTENV----------------------------------KVVSSSF 244
Query: 426 FCAIASSGT---LKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRD 482
C +++ G + G+ H + + + +++ MY KC I +A +VF + D
Sbjct: 245 TCTLSACGQGEFVSFGKQVHCDAIKVGFEDDPYVHTSLLTMYGKCQMIESAEKVFNEVPD 304
Query: 483 RTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGE 542
+ + WNA+I +G A L+IY ++ + +S T + VL++ AGL DLG
Sbjct: 305 K--EIELWNALISAYVGNGYAYDALRIYKQMKLCTVLSDSFTILNVLTSSSMAGLYDLG- 361
Query: 543 RYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAA 599
R + ++ + ++ + + G A + +M + DVV WG++++
Sbjct: 362 RLIHTEIVKRPLQSSITIQSALLTMYSKFGDSNYANSIFSTMKER-DVVAWGSVISG 417
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 145/328 (44%), Gaps = 64/328 (19%)
Query: 10 FNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYA 69
F + +A+L D ++ + S + C+ V G IH + KSGL+ + F+ +SL+++Y+
Sbjct: 431 FRAMEADLVKPDSDI-MASIISACTGLEKVDLGCTIHGFVIKSGLQLDVFVASSLLDMYS 489
Query: 70 KCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMG 129
K G +A ++F + VA N +IS Y RN+ + + +F +
Sbjct: 490 KFGFPERAGNIFSDMPLKNLVAWNSIISCYCRNNLPDLSINLFSQV-------------- 535
Query: 130 FAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGF 189
+ND + P+ V+ SV+++ + + + + +HG +++L I
Sbjct: 536 -LRNDLY----------------PDSVSFTSVLAAISSVAALLKGKSVHGYLVRLWIPFD 578
Query: 190 VIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPS 249
+ + L++MY C L A+ +F+ + E+N+V+WN M+ G+ G A ELF+ + S
Sbjct: 579 LQVENTLIDMYIKCGLLKYAQHIFERISEKNLVAWNSMIGGYGSHGECSKAIELFDEMRS 638
Query: 250 KDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQI 309
GI P+DV + L+S+C + EGL +
Sbjct: 639 -------------------------------SGIKPDDVTFLSLLSSCNHSGLIEEGLHL 667
Query: 310 HSII-VKAGFDCYDFIQATIIHFYAACG 336
++ +K G + I+ Y G
Sbjct: 668 FEMMKMKFGIEPRMEHYVNIVDLYGRAG 695
>gi|225444117|ref|XP_002266487.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 553
Score = 297 bits (761), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 165/515 (32%), Positives = 268/515 (52%), Gaps = 36/515 (6%)
Query: 151 VIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEAR 210
V P++ T +++ + +G + + + +H V K +D V + LL++Y
Sbjct: 70 VFPDKYTYPAMLKACWRMGSLSKGKEVHAHVTKTGLDSDVYVGNALLHLY---------- 119
Query: 211 SLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSE 270
G V AR LF+ +P +D+ SW T++ Y + E
Sbjct: 120 ---------------------GSTGQVTDARRLFDGMPHRDLASWNTLLGAY--NDNAVE 156
Query: 271 ALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIH 330
L +++ M+ +GI + + +V + SACG+ G ++H ++K G + ++
Sbjct: 157 VLVLFKRMMYEGIGGDHISMVIVFSACGKIGGTEFGKEVHGYVIKVGIRPALSLSNALLG 216
Query: 331 FYAACGRINLARLQF-ELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSA 389
Y CG ++ A+ F E+ + S L G++ G I+ AR +F+ M +D+ SW++
Sbjct: 217 VYTKCGEMDAAQSLFVEMAAMRDVVSHTILFNGYVDMGSIDLARGIFDQMSVKDLVSWNS 276
Query: 390 MISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNS 449
MI Y + + P A+ELF M + V+P+E TMVSV A AS L+ GR AH +++ N+
Sbjct: 277 MIHAYVKAKHPKKAIELFRKMENEMVEPDETTMVSVLAACASLADLQNGRLAHRFIIQNN 336
Query: 450 ITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKI 509
+ + A+IDMYAKCGS+ A FY + R V W I GLA HG + L +
Sbjct: 337 PRQDLFVGTALIDMYAKCGSLEEAMVTFYKMDSR--DVFTWTTAIEGLANHGHGDKALSL 394
Query: 510 YSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLG 569
++++EK+ IK N TF+ VL C +GLV G FK M Y ++P ++H GC++D+L
Sbjct: 395 FTEMEKQGIKPNQATFVSVLMACSRSGLVKEGCLLFKRMVEAYQIQPKIEHLGCLLDILS 454
Query: 570 RAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVL 629
RAG L AEE I+ MP K ++ TLL+A H ++GE+ A L L + +L
Sbjct: 455 RAGLLHQAEEFIKLMPPKEKIIANKTLLSACMNHLEYDLGEKIANGLTELSSQSHATHIL 514
Query: 630 LSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
LSN YA AG+W + R+ M++ ++++PG S V
Sbjct: 515 LSNFYALAGQWAEVAKTRRVMKEIDIRKVPGISSV 549
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 121/452 (26%), Positives = 217/452 (48%), Gaps = 74/452 (16%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
L+ C ++S+G+++H+ + K+GL+S+ ++ N+L++LY G
Sbjct: 81 LKACWRMGSLSKGKEVHAHVTKTGLDSDVYVGNALLHLYGSTG----------------- 123
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
++ DAR +FD P + S+ +++ + ND E L +F+ M
Sbjct: 124 --------------QVTDARRLFDGMPHRDLASWNTLLGAY--NDNAVEVLVLFKRMMYE 167
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
G+ + +++ V S+ +GG + +HG VIK+ I + +S LL +Y C + A
Sbjct: 168 GIGGDHISMVIVFSACGKIGGTEFGKEVHGYVIKVGIRPALSLSNALLGVYTKCGEMDAA 227
Query: 210 RSLFDEMKE-RNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERL 268
+SLF EM R++VS ++ NG+ G ++LAR +F+++ KD+VSW +MI Y++ +
Sbjct: 228 QSLFVEMAAMRDVVSHTILFNGYVDMGSIDLARGIFDQMSVKDLVSWNSMIHAYVKAKHP 287
Query: 269 SEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATI 328
+A+ ++R M + + P++ +V +++AC G H I++ F+ +
Sbjct: 288 KKAIELFRKMENEMVEPDETTMVSVLAACASLADLQNGRLAHRFIIQNNPRQDLFVGTAL 347
Query: 329 IHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWS 388
I YA CG +E+A F M RDV++W+
Sbjct: 348 IDMYAKCGS-------------------------------LEEAMVTFYKMDSRDVFTWT 376
Query: 389 AMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG-----RWAHE 443
I G A + + AL LF M G+KPN+ T VSV A + SG +KEG R
Sbjct: 377 TAIEGLANHGHGDKALSLFTEMEKQGIKPNQATFVSVLMACSRSGLVKEGCLLFKRMVEA 436
Query: 444 YVLNNSITLNDNLSAAIIDMYAKCGSINTAFE 475
Y + I ++L ++D+ ++ G ++ A E
Sbjct: 437 YQIQPKI---EHL-GCLLDILSRAGLLHQAEE 464
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 97/232 (41%), Gaps = 63/232 (27%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E +VS L C++ + G+ H I ++ + F+ +LI++YAKCG + +A
Sbjct: 306 ETTMVSVLAACASLADLQNGRLAHRFIIQNNPRQDLFVGTALIDMYAKCGSLEEA----- 360
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
M++ Y D+R+VF ++T+ I G A + +AL +
Sbjct: 361 ------------MVTFYKM-----DSRDVF---------TWTTAIEGLANHGHGDKALSL 394
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWE-CRMLHGLVIKLMIDGFVIISTNLLNMYC 201
F +M G+ PN+ T SV+ + G + E C L+ K M++ + I
Sbjct: 395 FTEMEKQGIKPNQATFVSVLMACSRSGLVKEGC-----LLFKRMVEAYQI---------- 439
Query: 202 VCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVV 253
+ I +L+ ++AGL+ A E + +P K+ +
Sbjct: 440 ----------------QPKIEHLGCLLDILSRAGLLHQAEEFIKLMPPKEKI 475
>gi|226508188|ref|NP_001146230.1| uncharacterized protein LOC100279802 [Zea mays]
gi|219886289|gb|ACL53519.1| unknown [Zea mays]
Length = 537
Score = 297 bits (761), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 172/462 (37%), Positives = 254/462 (54%), Gaps = 44/462 (9%)
Query: 240 ARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAML-----CD--GIAPNDVMIVD 292
AR +F+RIP D + T+I G + +A+++Y M CD + P+
Sbjct: 61 ARLVFDRIPHPDRFMYNTLIRGAAHSDAPRDAVSIYARMARHSADCDLMTLRPDKRTFPF 120
Query: 293 LISACGRAMAFGE-GLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKD 351
++ AC AM GE G Q+H+ +VKAG + F++ +I +A G + A F+ ++
Sbjct: 121 VLRACA-AMGAGETGAQVHAHVVKAGCESDAFVRNALIGMHATLGDLGAAAALFDGEARE 179
Query: 352 HIASWNALIAGFIRNGMI-------------------------------EDARQLFNNMQ 380
+W+A+I+GF R G I AR+LF+
Sbjct: 180 DAVAWSAMISGFARRGDIGAARELFDESPVKDLVSWNVMITAYAKLGDMAPARELFDGAP 239
Query: 381 KRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRW 440
RDV SW+AMISGY + A+ELF M G KP+ +TM+S+ A A SG L GR
Sbjct: 240 DRDVVSWNAMISGYVRCGSRKQAMELFEQMQAMGEKPDTVTMLSLLSACADSGDLDAGRR 299
Query: 441 AHEYVLN--NSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLA 498
H ++ + I L A+IDMYAKCGS+ +A EVF+ ++D+ +VS WN+II GLA
Sbjct: 300 LHGFLSGRFSRIGPTTALGNALIDMYAKCGSMTSALEVFWLMQDK--NVSTWNSIIGGLA 357
Query: 499 MHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDL 558
+HG A ++ ++ + + N+K + ITF+ VL+ C H G+VD G YF M+ Y +EP++
Sbjct: 358 LHGHATESIAVFRKMLQGNVKPDEITFVAVLAACSHGGMVDKGHEYFSLMQQRYRIEPNI 417
Query: 559 KHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAG 618
KHYGCMVD+L R G L++A E I +M ++ + VIW TLL A RIHG +E+ E A + L
Sbjct: 418 KHYGCMVDMLSRGGLLKEAFEFIGTMKIEPNPVIWRTLLGACRIHGEIELAEHANRELLK 477
Query: 619 LQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPG 660
+ VLLSNIYA G W + ++RK M D G+ + G
Sbjct: 478 ARSDASGDFVLLSNIYASVGEWPGSENMRKLMDDSGVNKEAG 519
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 113/465 (24%), Positives = 199/465 (42%), Gaps = 82/465 (17%)
Query: 108 AREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFR-------DMRILGVIPNEVTLAS 160
AR VFD+ P Y ++I G A +D R+A+ ++ D ++ + P++ T
Sbjct: 61 ARLVFDRIPHPDRFMYNTLIRGAAHSDAPRDAVSIYARMARHSADCDLMTLRPDKRTFPF 120
Query: 161 VISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERN 220
V+ + +G +H V+K + + L+ M+ L A +LFD +
Sbjct: 121 VLRACAAMGAGETGAQVHAHVVKAGCESDAFVRNALIGMHATLGDLGAAAALFDGEARED 180
Query: 221 IVSWNVMLNGFAKAGLVELARELFER-------------------------------IPS 249
V+W+ M++GFA+ G + ARELF+ P
Sbjct: 181 AVAWSAMISGFARRGDIGAARELFDESPVKDLVSWNVMITAYAKLGDMAPARELFDGAPD 240
Query: 250 KDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQI 309
+DVVSW MI GY++ +A+ ++ M G P+ V ++ L+SAC + G ++
Sbjct: 241 RDVVSWNAMISGYVRCGSRKQAMELFEQMQAMGEKPDTVTMLSLLSACADSGDLDAGRRL 300
Query: 310 HSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMI 369
H + GR + LG NALI + + G +
Sbjct: 301 HGFL---------------------SGRFSRIGPTTALG--------NALIDMYAKCGSM 331
Query: 370 EDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAI 429
A ++F MQ ++V +W+++I G A + ++ +F M+ VKP+EIT V+V A
Sbjct: 332 TSALEVFWLMQDKNVSTWNSIIGGLALHGHATESIAVFRKMLQGNVKPDEITFVAVLAAC 391
Query: 430 ASSGTLKEGRWAHEY--VLNNSITLNDNLS--AAIIDMYAKCGSINTAFEVFYHIRDRTT 485
+ G + +G HEY ++ + N+ ++DM ++ G + AFE ++
Sbjct: 392 SHGGMVDKG---HEYFSLMQQRYRIEPNIKHYGCMVDMLSRGGLLKEAFEFIGTMKIEPN 448
Query: 486 SVSPWNAIICGLAMHGDANLT-------LKIYSDLEKRNIKLNSI 523
V W ++ +HG+ L LK SD + L++I
Sbjct: 449 PVI-WRTLLGACRIHGEIELAEHANRELLKARSDASGDFVLLSNI 492
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 148/317 (46%), Gaps = 64/317 (20%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
LR C+A A G Q+H+ + K+G ES+ F++N+LI ++A G + A ++FD + D
Sbjct: 122 LRACAAMGAGETGAQVHAHVVKAGCESDAFVRNALIGMHATLGDLGAAAALFDGEAREDA 181
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIK------------------------------- 118
VA + MISG+ R + ARE+FD++P+K
Sbjct: 182 VAWSAMISGFARRGDIGAARELFDESPVKDLVSWNVMITAYAKLGDMAPARELFDGAPDR 241
Query: 119 CCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLH 178
VS+ +MI G+ + ++A+E+F M+ +G P+ VT+ S++S+ G + R LH
Sbjct: 242 DVVSWNAMISGYVRCGSRKQAMELFEQMQAMGEKPDTVTMLSLLSACADSGDLDAGRRLH 301
Query: 179 GLVIKLM--IDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGL 236
G + I + L++MY C S+ A +F M+++N+ +WN ++ G A G
Sbjct: 302 GFLSGRFSRIGPTTALGNALIDMYAKCGSMTSALEVFWLMQDKNVSTWNSIIGGLALHG- 360
Query: 237 VELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISA 296
+E++ ++R ML + P+++ V +++A
Sbjct: 361 ------------------------------HATESIAVFRKMLQGNVKPDEITFVAVLAA 390
Query: 297 CGRAMAFGEGLQIHSII 313
C +G + S++
Sbjct: 391 CSHGGMVDKGHEYFSLM 407
>gi|356536685|ref|XP_003536866.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g71490-like [Glycine max]
Length = 723
Score = 297 bits (761), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 195/641 (30%), Positives = 316/641 (49%), Gaps = 76/641 (11%)
Query: 28 SALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTL 87
S L C+ ++SQG+Q+H+ + GL+ N + + L+N Y L+ A+ + +S +TL
Sbjct: 86 SLLLACTHFKSLSQGKQLHAQVISLGLDQNPILVSRLVNFYTNVNLLVDAQFVTESSNTL 145
Query: 88 DPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMR 147
DP+ N++IS Y+RN GF + EAL V+++M
Sbjct: 146 DPLHWNLLISAYVRN--------------------------GF-----FVEALCVYKNML 174
Query: 148 ILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLV 207
+ P+E T SV+ + +H + ++ + + L++MY L
Sbjct: 175 NKKIEPDEYTYPSVLKACGESLDFNSGLEVHRSIEASSMEWSLFVHNALVSMYGRFGKLE 234
Query: 208 EARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSK----DVVSWGTMIDGYL 263
AR LFD M R+ VSWN +++ +A G+ + A +LF + + +V+ W T+ G L
Sbjct: 235 IARHLFDNMPRRDSVSWNTIISCYASRGIWKEAFQLFGSMQEEGVEMNVIIWNTIAGGCL 294
Query: 264 QVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDF 323
AL + M I + + +V ++AC A G +IH V+ FD +D
Sbjct: 295 HSGNFRGALQLISQMRTS-IHLDAIAMVVGLNACSHIGAIKLGKEIHGHAVRTCFDVFDN 353
Query: 324 IQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRD 383
++ +I Y+ C + A FI LF+ +++
Sbjct: 354 VKNALITMYSRCRDLGHA---------------------FI----------LFHRTEEKG 382
Query: 384 VYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHE 443
+ +W+AM+SGYA ++ LF M+ G++PN +T+ SV A L+ G+ H
Sbjct: 383 LITWNAMLSGYAHMDRYEEVTFLFREMLQEGMEPNYVTIASVLPLCARIANLQHGKEFHC 442
Query: 444 YVLNNSITLNDNLSA--AIIDMYAKCGSINTAFEVFYHI--RDRTTSVSPWNAIICGLAM 499
Y++ + + L A++DMY++ G + A +VF + RD T + ++I G M
Sbjct: 443 YIMKHK-QFEEYLLLWNALVDMYSRSGRVLEARKVFDSLTKRDEVT----YTSMILGYGM 497
Query: 500 HGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLK 559
G+ TLK++ ++ K IK + +T + VL+ C H+GLV G+ FK M V+ + P L+
Sbjct: 498 KGEGETTLKLFEEMCKLEIKPDHVTMVAVLTACSHSGLVAQGQVLFKRMIDVHGIVPRLE 557
Query: 560 HYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGL 619
HY CM DL GRAG L A+E I MP K +W TLL A RIHGN E+GE AA L +
Sbjct: 558 HYACMADLFGRAGLLNKAKEFITGMPYKPTSAMWATLLGACRIHGNTEMGEWAAGKLLEM 617
Query: 620 QPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPG 660
+P H VL++N+YA AG W +R MR+ G+++ PG
Sbjct: 618 KPDHSGYYVLIANMYAAAGSWRKLAEVRTYMRNLGVRKAPG 658
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 114/488 (23%), Positives = 221/488 (45%), Gaps = 68/488 (13%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E S L+ C + + G ++H I S +E + F+ N+L+++Y + G + A+ +FD
Sbjct: 182 EYTYPSVLKACGESLDFNSGLEVHRSIEASSMEWSLFVHNALVSMYGRFGKLEIARHLFD 241
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKC----CVSYTSMIMGFAQNDCWRE 138
+ D V+ N +IS Y +A ++F + + + ++ G + +R
Sbjct: 242 NMPRRDSVSWNTIISCYASRGIWKEAFQLFGSMQEEGVEMNVIIWNTIAGGCLHSGNFRG 301
Query: 139 ALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLN 198
AL++ MR + + + + +++ H+G I + +HG ++ D F + L+
Sbjct: 302 ALQLISQMRT-SIHLDAIAMVVGLNACSHIGAIKLGKEIHGHAVRTCFDVFDNVKNALIT 360
Query: 199 MYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTM 258
MY C L A LF +E+ +++WN ML+G+A
Sbjct: 361 MYSRCRDLGHAFILFHRTEEKGLITWNAMLSGYA-------------------------- 394
Query: 259 IDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGF 318
++R E ++R ML +G+ PN V I ++ C R G + H I+K
Sbjct: 395 -----HMDRYEEVTFLFREMLQEGMEPNYVTIASVLPLCARIANLQHGKEFHCYIMK--- 446
Query: 319 DCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNN 378
QFE +++ WNAL+ + R+G + +AR++F++
Sbjct: 447 -----------------------HKQFE----EYLLLWNALVDMYSRSGRVLEARKVFDS 479
Query: 379 MQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG 438
+ KRD ++++MI GY + L+LF M +KP+ +TMV+V A + SG + +G
Sbjct: 480 LTKRDEVTYTSMILGYGMKGEGETTLKLFEEMCKLEIKPDHVTMVAVLTACSHSGLVAQG 539
Query: 439 RWAHEYVLN-NSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGL 497
+ + +++ + I A + D++ + G +N A E + + TS + W ++
Sbjct: 540 QVLFKRMIDVHGIVPRLEHYACMADLFGRAGLLNKAKEFITGMPYKPTS-AMWATLLGAC 598
Query: 498 AMHGDANL 505
+HG+ +
Sbjct: 599 RIHGNTEM 606
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 105/472 (22%), Positives = 210/472 (44%), Gaps = 41/472 (8%)
Query: 158 LASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMK 217
+ S++ + H + + + LH VI L +D I+ + L+N Y + LV+A+ + +
Sbjct: 84 IGSLLLACTHFKSLSQGKQLHAQVISLGLDQNPILVSRLVNFYTNVNLLVDAQFVTESSN 143
Query: 218 ERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRA 277
+ + WN++++ + + G EAL +Y+
Sbjct: 144 TLDPLHWNLLISAYVRNGF-------------------------------FVEALCVYKN 172
Query: 278 MLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGR 337
ML I P++ ++ ACG ++ F GL++H I + + F+ ++ Y G+
Sbjct: 173 MLNKKIEPDEYTYPSVLKACGESLDFNSGLEVHRSIEASSMEWSLFVHNALVSMYGRFGK 232
Query: 338 INLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKR----DVYSWSAMISG 393
+ +AR F+ + SWN +I+ + G+ ++A QLF +MQ+ +V W+ + G
Sbjct: 233 LEIARHLFDNMPRRDSVSWNTIISCYASRGIWKEAFQLFGSMQEEGVEMNVIIWNTIAGG 292
Query: 394 YAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLN 453
+ AL+L M + + I MV A + G +K G+ H + + +
Sbjct: 293 CLHSGNFRGALQLISQM-RTSIHLDAIAMVVGLNACSHIGAIKLGKEIHGHAVRTCFDVF 351
Query: 454 DNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDL 513
DN+ A+I MY++C + AF +F+ R + WNA++ G A ++ ++
Sbjct: 352 DNVKNALITMYSRCRDLGHAFILFH--RTEEKGLITWNAMLSGYAHMDRYEEVTFLFREM 409
Query: 514 EKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQ 573
+ ++ N +T VL C + G+ + + E L + +VD+ R+G+
Sbjct: 410 LQEGMEPNYVTIASVLPLCARIANLQHGKEFHCYIMKHKQFEEYLLLWNALVDMYSRSGR 469
Query: 574 LEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQ--PSH 623
+ +A +V S+ K D V + +++ + G E + + + L+ P H
Sbjct: 470 VLEARKVFDSL-TKRDEVTYTSMILGYGMKGEGETTLKLFEEMCKLEIKPDH 520
>gi|115458828|ref|NP_001053014.1| Os04g0463800 [Oryza sativa Japonica Group]
gi|38347057|emb|CAE04357.2| OSJNBa0060P14.4 [Oryza sativa Japonica Group]
gi|113564585|dbj|BAF14928.1| Os04g0463800 [Oryza sativa Japonica Group]
Length = 767
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 208/677 (30%), Positives = 339/677 (50%), Gaps = 85/677 (12%)
Query: 38 AVSQGQQIHSLIFKSGL---ESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNI 94
A+ G +H+ + GL + + + +SL+ +YA+CG +
Sbjct: 122 ALPVGAAVHAYSVRFGLLEGDGSVAVASSLVYMYARCGSV-------------------- 161
Query: 95 MISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREAL----EVFRDMRILG 150
DA +FD+ P + V++T++I G N E L + R G
Sbjct: 162 -----------RDAVRLFDEMPERDVVAWTAVISGCVCNGQCGEGLSYLVRMVRSAGDGG 210
Query: 151 VIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEAR 210
PN T+ S + + LG + LHG +K + + ++L +MY C S +AR
Sbjct: 211 ARPNSRTMESGLEACGVLGELSVGTCLHGFGVKAGVGHCPSVVSSLFSMYTKCDSTEDAR 270
Query: 211 SLFDEMKERNIVSWNVMLNGFAKAGLVELARELF----ERIPSKDVVSWGTMIDGYLQVE 266
LF E+ E+++VSW ++ + +AG E A ELF E D V ++ G
Sbjct: 271 ILFPELPEKDLVSWTSLIGAYCRAGHAEKAVELFLGMEESGLQPDEVVISCLLAGLGNDA 330
Query: 267 RLSEALTMYRAML----CDGIAPNDVMI--------VDLISACGRAMAFGEGLQIHSIIV 314
++ T + A++ D + + +I VD+ + R + + S++V
Sbjct: 331 KVRGGKTFHAAIVRRNFGDSVLIGNALISMYAKCKQVDIAATVFRMLHQRDTDSWSSMVV 390
Query: 315 ---KAGFD--CYDFIQ-----------------ATIIHFYAACGRINLARLQFELGIKDH 352
KAG D C + + +II + GR+ L + IK H
Sbjct: 391 AYCKAGLDLKCLELYREMQFRDKDEFEYDTNSLISIISSCSRLGRLRLGQSAHCYSIK-H 449
Query: 353 IAS-----WNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELF 407
+A NALI+ + R G + AR++F ++ +DV +WSA+IS Y+ AL L+
Sbjct: 450 LAGENSSVANALISMYGRCGNFDVARKIFGMVKTKDVVTWSALISSYSHLGHSKDALLLY 509
Query: 408 HGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKC 467
M+ GVKPN T+VSV + A+ L+ G H +V + + + ++ A++DMY KC
Sbjct: 510 DQMLTEGVKPNSATLVSVISSCANLAALEHGELIHSHVKDVGLECDLSICTALVDMYMKC 569
Query: 468 GSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIG 527
G + A ++F + +R V WN +I G MHG+A LK++S +E+ N+K NS+TF+
Sbjct: 570 GQLGIARKMFDSMLER--DVVTWNVMISGYGMHGEAIQALKLFSMMERGNVKPNSLTFLA 627
Query: 528 VLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMK 587
+LS CCHAGLVD G F M+ Y++EP+LKHY CMVDLLG++G L++AE+V+ +MP++
Sbjct: 628 ILSACCHAGLVDKGRELFTRMEE-YSLEPNLKHYACMVDLLGKSGHLQEAEDVVSAMPIE 686
Query: 588 ADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIR 647
D IWGTLL A ++H N E+G R AK P + +L+SN Y A +W + +R
Sbjct: 687 PDGGIWGTLLGACKMHDNFEMGLRVAKKAFASDPENDGYYILMSNSYGSAEKWNEIEKLR 746
Query: 648 KEMRDCGMKRLPGFSGV 664
M++ G+++ G+S +
Sbjct: 747 DMMKNHGVEKSIGWSTI 763
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 109/472 (23%), Positives = 199/472 (42%), Gaps = 80/472 (16%)
Query: 140 LEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMI---DGFVIISTNL 196
L R MR G P+ T V S++ LG + +H ++ + DG V ++++L
Sbjct: 92 LSAHRRMRASGARPSRFTAPLVASAAAELGALPVGAAVHAYSVRFGLLEGDGSVAVASSL 151
Query: 197 LNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWG 256
+ MY C S V A LF+ +P +DVV+W
Sbjct: 152 VYMYARCGS-------------------------------VRDAVRLFDEMPERDVVAWT 180
Query: 257 TMIDGYLQVERLSEALT----MYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSI 312
+I G + + E L+ M R+ G PN + + ACG G +H
Sbjct: 181 AVISGCVCNGQCGEGLSYLVRMVRSAGDGGARPNSRTMESGLEACGVLGELSVGTCLHGF 240
Query: 313 IVKAGFDCYDFIQATIIHFYAACGRINLARLQF-ELGIKDHIASWNALIAGFIRNGMIED 371
VKAG + +++ Y C AR+ F EL KD + SW +LI + R G E
Sbjct: 241 GVKAGVGHCPSVVSSLFSMYTKCDSTEDARILFPELPEKD-LVSWTSLIGAYCRAGHAEK 299
Query: 372 ARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIAS 431
A+ELF GM ++G++P+E+ + + + +
Sbjct: 300 -------------------------------AVELFLGMEESGLQPDEVVISCLLAGLGN 328
Query: 432 SGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWN 491
++ G+ H ++ + + + A+I MYAKC ++ A VF + R T W+
Sbjct: 329 DAKVRGGKTFHAAIVRRNFGDSVLIGNALISMYAKCKQVDIAATVFRMLHQRDT--DSWS 386
Query: 492 AIICGLAMHGDANLTLKIYSDLEKRN---IKLNSITFIGVLSTCCHAGLVDLGER-YFKS 547
+++ G L++Y +++ R+ + ++ + I ++S+C G + LG+ + S
Sbjct: 387 SMVVAYCKAGLDLKCLELYREMQFRDKDEFEYDTNSLISIISSCSRLGRLRLGQSAHCYS 446
Query: 548 MKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAA 599
+K + + + ++ + GR G + A ++ + K DVV W L+++
Sbjct: 447 IKHLAGENSSVAN--ALISMYGRCGNFDVARKIFGMVKTK-DVVTWSALISS 495
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/359 (18%), Positives = 138/359 (38%), Gaps = 42/359 (11%)
Query: 248 PSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGL 307
P D W +++ + + L+ +R M G P+ + SA A G
Sbjct: 68 PCPDAFLWNSLLRSRHRASDFASTLSAHRRMRASGARPSRFTAPLVASAAAELGALPVGA 127
Query: 308 QIHSIIVKAGF---DCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFI 364
+H+ V+ G D + +++++ YA CG + A F+ + + +W A+I+G +
Sbjct: 128 AVHAYSVRFGLLEGDGSVAVASSLVYMYARCGSVRDAVRLFDEMPERDVVAWTAVISGCV 187
Query: 365 RNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVS 424
NG E + + + D G +PN TM S
Sbjct: 188 CNGQC---------------------------GEGLSYLVRMVRSAGDGGARPNSRTMES 220
Query: 425 VFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRT 484
A G L G H + + + ++ +++ MY KC S A +F + ++
Sbjct: 221 GLEACGVLGELSVGTCLHGFGVKAGVGHCPSVVSSLFSMYTKCDSTEDARILFPELPEK- 279
Query: 485 TSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVD----L 540
+ W ++I G A ++++ +E+ ++ + + +C AGL +
Sbjct: 280 -DLVSWTSLIGAYCRAGHAEKAVELFLGMEESGLQPDEVVI-----SCLLAGLGNDAKVR 333
Query: 541 GERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAA 599
G + F + N + ++ + + Q++ A V R M + D W +++ A
Sbjct: 334 GGKTFHAAIVRRNFGDSVLIGNALISMYAKCKQVDIAATVFR-MLHQRDTDSWSSMVVA 391
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 96/239 (40%), Gaps = 71/239 (29%)
Query: 26 LVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCS 85
LVS + C+ A+ G+ IHS + GLE + I +L+++Y KCG + A+ MFDS
Sbjct: 524 LVSVISSCANLAALEHGELIHSHVKDVGLECDLSICTALVDMYMKCGQLGIARKMFDSML 583
Query: 86 TLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRD 145
D V N+MISGY + +AL++F
Sbjct: 584 ERDVVTWNVMISGYGMHGEAI-------------------------------QALKLFSM 612
Query: 146 MRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSS 205
M V PN +T +++S+ H G ++D
Sbjct: 613 MERGNVKPNSLTFLAILSACCHAG---------------LVD------------------ 639
Query: 206 LVEARSLFDEMK----ERNIVSWNVMLNGFAKAGLVELARELFERIP-SKDVVSWGTMI 259
+ R LF M+ E N+ + M++ K+G ++ A ++ +P D WGT++
Sbjct: 640 --KGRELFTRMEEYSLEPNLKHYACMVDLLGKSGHLQEAEDVVSAMPIEPDGGIWGTLL 696
>gi|413956916|gb|AFW89565.1| hypothetical protein ZEAMMB73_426720 [Zea mays]
Length = 537
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 172/462 (37%), Positives = 254/462 (54%), Gaps = 44/462 (9%)
Query: 240 ARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAML-----CD--GIAPNDVMIVD 292
AR +F+RIP D + T+I G + +A+++Y M CD + P+
Sbjct: 61 ARLVFDRIPHPDRFMYNTLIRGAAHSDAPRDAVSIYARMARHSADCDLMTLRPDKRTFPF 120
Query: 293 LISACGRAMAFGE-GLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKD 351
++ AC AM GE G Q+H+ +VKAG + F++ +I +A G + A F+ ++
Sbjct: 121 VLRACA-AMGAGETGAQVHAHVVKAGCESDAFVRNALIGMHATLGDLGAAAALFDGEARE 179
Query: 352 HIASWNALIAGFIRNGMI-------------------------------EDARQLFNNMQ 380
+W+A+I+GF R G I AR+LF+
Sbjct: 180 DAVAWSAMISGFARRGDIGAARELFDESPVKDLVSWNVMITAYAKLGDMAPARELFDGAP 239
Query: 381 KRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRW 440
RDV SW+AMISGY + A+ELF M G KP+ +TM+S+ A A SG L GR
Sbjct: 240 DRDVVSWNAMISGYVRCGSRKQAMELFEQMQAMGEKPDTVTMLSLLSACADSGDLDAGRR 299
Query: 441 AHEYVLN--NSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLA 498
H ++ + I L A+IDMYAKCGS+ +A EVF+ ++D+ +VS WN+II GLA
Sbjct: 300 LHGFLSGRFSRIGPTTALGNALIDMYAKCGSMTSALEVFWLMQDK--NVSTWNSIIGGLA 357
Query: 499 MHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDL 558
+HG A ++ ++ + + N+K + ITF+ VL+ C H G+VD G YF M+ Y +EP++
Sbjct: 358 LHGHATESIAVFRKMLQGNVKPDEITFVAVLAACSHGGMVDKGHEYFSLMQQRYRIEPNI 417
Query: 559 KHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAG 618
KHYGCMVD+L R G L++A E I +M ++ + VIW TLL A RIHG +E+ E A + L
Sbjct: 418 KHYGCMVDMLSRGGLLKEAFEFIGTMKIEPNPVIWRTLLGACRIHGEIELAEHANRELLK 477
Query: 619 LQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPG 660
+ VLLSNIYA G W + ++RK M D G+ + G
Sbjct: 478 ARSDASGDFVLLSNIYASVGEWPGSENMRKLMDDSGVNKEAG 519
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 113/465 (24%), Positives = 199/465 (42%), Gaps = 82/465 (17%)
Query: 108 AREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFR-------DMRILGVIPNEVTLAS 160
AR VFD+ P Y ++I G A +D R+A+ ++ D ++ + P++ T
Sbjct: 61 ARLVFDRIPHPDRFMYNTLIRGAAHSDAPRDAVSIYARMARHSADCDLMTLRPDKRTFPF 120
Query: 161 VISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERN 220
V+ + +G +H V+K + + L+ M+ L A +LFD +
Sbjct: 121 VLRACAAMGAGETGAQVHAHVVKAGCESDAFVRNALIGMHATLGDLGAAAALFDGEARED 180
Query: 221 IVSWNVMLNGFAKAGLVELARELFER-------------------------------IPS 249
V+W+ M++GFA+ G + ARELF+ P
Sbjct: 181 AVAWSAMISGFARRGDIGAARELFDESPVKDLVSWNVMITAYAKLGDMAPARELFDGAPD 240
Query: 250 KDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQI 309
+DVVSW MI GY++ +A+ ++ M G P+ V ++ L+SAC + G ++
Sbjct: 241 RDVVSWNAMISGYVRCGSRKQAMELFEQMQAMGEKPDTVTMLSLLSACADSGDLDAGRRL 300
Query: 310 HSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMI 369
H + GR + LG NALI + + G +
Sbjct: 301 HGFL---------------------SGRFSRIGPTTALG--------NALIDMYAKCGSM 331
Query: 370 EDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAI 429
A ++F MQ ++V +W+++I G A + ++ +F M+ VKP+EIT V+V A
Sbjct: 332 TSALEVFWLMQDKNVSTWNSIIGGLALHGHATESIAVFRKMLQGNVKPDEITFVAVLAAC 391
Query: 430 ASSGTLKEGRWAHEY--VLNNSITLNDNLS--AAIIDMYAKCGSINTAFEVFYHIRDRTT 485
+ G + +G HEY ++ + N+ ++DM ++ G + AFE ++
Sbjct: 392 SHGGMVDKG---HEYFSLMQQRYRIEPNIKHYGCMVDMLSRGGLLKEAFEFIGTMKIEPN 448
Query: 486 SVSPWNAIICGLAMHGDANLT-------LKIYSDLEKRNIKLNSI 523
V W ++ +HG+ L LK SD + L++I
Sbjct: 449 PVI-WRTLLGACRIHGEIELAEHANRELLKARSDASGDFVLLSNI 492
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 148/317 (46%), Gaps = 64/317 (20%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
LR C+A A G Q+H+ + K+G ES+ F++N+LI ++A G + A ++FD + D
Sbjct: 122 LRACAAMGAGETGAQVHAHVVKAGCESDAFVRNALIGMHATLGDLGAAAALFDGEAREDA 181
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIK------------------------------- 118
VA + MISG+ R + ARE+FD++P+K
Sbjct: 182 VAWSAMISGFARRGDIGAARELFDESPVKDLVSWNVMITAYAKLGDMAPARELFDGAPDR 241
Query: 119 CCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLH 178
VS+ +MI G+ + ++A+E+F M+ +G P+ VT+ S++S+ G + R LH
Sbjct: 242 DVVSWNAMISGYVRCGSRKQAMELFEQMQAMGEKPDTVTMLSLLSACADSGDLDAGRRLH 301
Query: 179 GLVIKLM--IDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGL 236
G + I + L++MY C S+ A +F M+++N+ +WN ++ G A G
Sbjct: 302 GFLSGRFSRIGPTTALGNALIDMYAKCGSMTSALEVFWLMQDKNVSTWNSIIGGLALHG- 360
Query: 237 VELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISA 296
+E++ ++R ML + P+++ V +++A
Sbjct: 361 ------------------------------HATESIAVFRKMLQGNVKPDEITFVAVLAA 390
Query: 297 CGRAMAFGEGLQIHSII 313
C +G + S++
Sbjct: 391 CSHGGMVDKGHEYFSLM 407
>gi|296089484|emb|CBI39303.3| unnamed protein product [Vitis vinifera]
Length = 723
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 211/677 (31%), Positives = 316/677 (46%), Gaps = 116/677 (17%)
Query: 1 TPLDHFHSVFNSQKANLQNSDYEL---ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESN 57
T + +H V N K + SD L +AL C + + G+ IH+LI SGL
Sbjct: 17 TQMGFYHEVMNLFK-EARMSDLRLDKFTFSNALSVCGRTLDLRLGRLIHALITVSGLGGP 75
Query: 58 TFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPI 117
+ NSLI++Y KCG I A+ +F+S LD
Sbjct: 76 VLLTNSLIDMYCKCGRIDWARLVFESADELDS---------------------------- 107
Query: 118 KCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVI-------SSSVHLGG 170
VS+ S+I G+ + E L + M G+ N L S + SSS+ G
Sbjct: 108 ---VSWNSLIAGYVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECG- 163
Query: 171 IWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNG 230
+MLHG +KL +D V++ T LL+ Y
Sbjct: 164 ----KMLHGCAVKLGLDLDVVVGTALLDTY------------------------------ 189
Query: 231 FAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLS-----EALTMYRAMLCDGIAP 285
AK G +E A ++F+ +P +VV + MI G+LQ+E ++ EA+ ++ M G+ P
Sbjct: 190 -AKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFFEMQSRGMKP 248
Query: 286 NDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQF 345
++ ++ AC AF G QIH+ I K +FI
Sbjct: 249 SEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIG-------------------- 288
Query: 346 ELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALE 405
NAL+ + +G IED + F++ K DV SW+++I G+ QN Q L
Sbjct: 289 -----------NALVELYSLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLT 337
Query: 406 LFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYA 465
LFH ++ +G KP+E T+ + A A+ +K G H Y + I + + I MYA
Sbjct: 338 LFHELLFSGRKPDEFTISIMLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYA 397
Query: 466 KCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITF 525
KCG I++A F ++ + W+ +I A HG A + ++ ++ I N ITF
Sbjct: 398 KCGDIDSANMTFKETKN--PDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITF 455
Query: 526 IGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMP 585
+GVL C H GLV+ G RYF+ MK + + P++KH C+VDLLGRAG+L +AE I
Sbjct: 456 LGVLVACSHGGLVEEGLRYFEIMKKDHGITPNVKHSACIVDLLGRAGRLAEAESFIMDSG 515
Query: 586 MKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFS 645
+ D V+W +LL+A R+H + G+R A+ + L+P S VLL NIY DAG A
Sbjct: 516 FEGDPVMWRSLLSACRVHKATDTGKRVAERVIELEPEAAASYVLLYNIYNDAGIQMPATE 575
Query: 646 IRKEMRDCGMKRLPGFS 662
IR M+D G+K+ PG S
Sbjct: 576 IRNLMKDRGVKKEPGLS 592
Score = 122 bits (305), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 100/394 (25%), Positives = 176/394 (44%), Gaps = 44/394 (11%)
Query: 247 IPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEG 306
+P ++VVSW ++I GY Q+ E + +++ + + + +S CGR + G
Sbjct: 1 MPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLG 60
Query: 307 LQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRN 366
IH++I +G + ++I Y CGRI+ ARL FE + SWN+LIAG++R
Sbjct: 61 RLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRI 120
Query: 367 GMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVF 426
G N++ L L M+ G+ N + S
Sbjct: 121 G----------------------------SNDE---MLRLLVKMLRHGLNLNSYALGSAL 149
Query: 427 CAIAS--SGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRT 484
A S S +++ G+ H + + L+ + A++D YAK G + A ++F + D
Sbjct: 150 KACGSNFSSSIECGKMLHGCAVKLGLDLDVVVGTALLDTYAKIGDLEDATKIFKLMPD-- 207
Query: 485 TSVSPWNAIICG---LAMHGD--ANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVD 539
+V +NA+I G + D AN + ++ +++ R +K + TF +L C +
Sbjct: 208 PNVVMYNAMIAGFLQMETMADEFANEAMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFE 267
Query: 540 LGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAA 599
G++ + YN++ D +V+L +G +ED + S P K DVV W +L+
Sbjct: 268 CGKQIHAQIFK-YNLQSDEFIGNALVELYSLSGSIEDGLKCFHSTP-KLDVVSWTSLIVG 325
Query: 600 SRIHGNVEVGERAAKSL--AGLQPSHGPSRVLLS 631
+G E G L +G +P ++LS
Sbjct: 326 HVQNGQFEGGLTLFHELLFSGRKPDEFTISIMLS 359
>gi|359482660|ref|XP_002285225.2| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Vitis vinifera]
Length = 872
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 187/635 (29%), Positives = 304/635 (47%), Gaps = 97/635 (15%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
LR C +++G+++H + + G ES+ + N+LI +Y KCG I A
Sbjct: 202 LRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSA------------ 249
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
R VFD+ P + +S+ +MI G+ +ND E L +F MR
Sbjct: 250 -------------------RLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREF 290
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
V P+ +T+ SVIS+ LG R +HG VIK V ++ +L+ M+
Sbjct: 291 FVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMH--------- 341
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLS 269
+ G + A +F ++ KD+VSW MI GY +
Sbjct: 342 ----------------------SSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPE 379
Query: 270 EALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATII 329
+A+ Y M +G+ P+++ I ++SAC +G+ +H + G Y + ++I
Sbjct: 380 KAVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLI 439
Query: 330 HFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSA 389
Y+ C I+ A ++F+ + ++V SW++
Sbjct: 440 DMYSKCR-------------------------------CIDKALEVFHRIPNKNVISWTS 468
Query: 390 MISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNS 449
+I G N + AL F M+ +KPN +T+VSV A A G L G+ H + L
Sbjct: 469 IILGLRLNYRSFEALFFFQQMI-LSLKPNSVTLVSVLSACARIGALSCGKEIHAHALRTG 527
Query: 450 ITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKI 509
+ + L A++DMY +CG + A+ F V+ WN ++ G A G L +++
Sbjct: 528 LGFDGFLPNALLDMYVRCGRMEPAWNQFNSCE---KDVASWNILLTGYAQQGKGGLAVEL 584
Query: 510 YSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLG 569
+ + + ++ + ITF +L C +G+V G YF+SM+ +++ P+LKHY +VDLLG
Sbjct: 585 FHKMIESDVNPDEITFTSLLCACSRSGMVTDGLEYFESMEHKFHIAPNLKHYASVVDLLG 644
Query: 570 RAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVL 629
RAG+LEDA E I+ MP+ D IWG LL A RI+ NVE+GE AA+ + + +L
Sbjct: 645 RAGRLEDAYEFIKKMPIDPDPAIWGALLNACRIYQNVELGELAAQHIFEMDTKSVGYYIL 704
Query: 630 LSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
L N+YAD+G+W++ +RK MR+ + PG S V
Sbjct: 705 LCNLYADSGKWDEVARVRKIMRENRLTVDPGCSWV 739
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 119/485 (24%), Positives = 210/485 (43%), Gaps = 101/485 (20%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+ + S + C A G+++H + K+G + + NSLI +++ G +A+ +F
Sbjct: 297 MTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDEAEMVFSK 356
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
D V+ MISGY +N G + +A+E +
Sbjct: 357 MEFKDLVSWTAMISGYEKN--------------------------GLPE-----KAVETY 385
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
M GV+P+E+T+ASV+S+ LG + + MLH + + +VI++ +L++MY C
Sbjct: 386 TIMEHEGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKC 445
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYL 263
+ +A +F + +N++SW ++I G
Sbjct: 446 RCIDKALEVFHRIPNKNVISWT-------------------------------SIILGLR 474
Query: 264 QVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDF 323
R EAL ++ M+ + PN V +V ++SAC R A G +IH+ ++ G F
Sbjct: 475 LNYRSFEALFFFQQMIL-SLKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGF 533
Query: 324 IQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRD 383
+ ++ Y CGR+ A QF KD +ASWN L+ G+
Sbjct: 534 LPNALLDMYVRCGRMEPAWNQFNSCEKD-VASWNILLTGY-------------------- 572
Query: 384 VYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHE 443
AQ + +A+ELFH M+++ V P+EIT S+ CA + SG + +G E
Sbjct: 573 -----------AQQGKGGLAVELFHKMIESDVNPDEITFTSLLCACSRSGMVTDGLEYFE 621
Query: 444 YVLNN-SITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSP--WNAIICGLAMH 500
+ + I N A+++D+ + G + A+E I+ P W A++ ++
Sbjct: 622 SMEHKFHIAPNLKHYASVVDLLGRAGRLEDAYEF---IKKMPIDPDPAIWGALLNACRIY 678
Query: 501 GDANL 505
+ L
Sbjct: 679 QNVEL 683
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 124/500 (24%), Positives = 209/500 (41%), Gaps = 84/500 (16%)
Query: 173 ECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFA 232
E +H V K + V + LL+M+ LVEA +F +M ER++ SWNV++ G+A
Sbjct: 112 EGSRVHSYVSKTVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYA 171
Query: 233 KAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVD 292
KAG + EAL +Y ML GI P+
Sbjct: 172 KAGYFD-------------------------------EALNLYHRMLWVGIRPDVYTFPC 200
Query: 293 LISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDH 352
++ CG G ++H +++ GF+ + +I Y CG I ARL F+ +
Sbjct: 201 VLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRD 260
Query: 353 IASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVD 412
SWNA+I+G+ N + + +LF M+ E F
Sbjct: 261 RISWNAMISGYFENDVCLEGLRLFFMMR------------------------EFF----- 291
Query: 413 AGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINT 472
V P+ +TM SV A + G + GR H YV+ +++ ++I M++ G +
Sbjct: 292 --VDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDE 349
Query: 473 AFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTC 532
A VF + + + W A+I G +G ++ Y+ +E + + IT VLS C
Sbjct: 350 AEMVFSKMEFK--DLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSAC 407
Query: 533 CHAGLVDLGERYFKSMKSVYNVEPDLKHY----GCMVDLLGRAGQLEDAEEVIRSMPMKA 588
GL+D G M + L Y ++D+ + ++ A EV +P K
Sbjct: 408 AGLGLLDKG-----IMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNK- 461
Query: 589 DVVIWGTLLAASRIHGNVEVGERAAKSLAGLQP---SHGPSRVLLSNIYADAGRWEDAFS 645
+V+ W +++ R++ R+ ++L Q S P+ V L ++ + R A S
Sbjct: 462 NVISWTSIILGLRLN------YRSFEALFFFQQMILSLKPNSVTLVSVLSACARI-GALS 514
Query: 646 IRKEMRDCGMKRLPGFSGVV 665
KE+ ++ GF G +
Sbjct: 515 CGKEIHAHALRTGLGFDGFL 534
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 139/287 (48%), Gaps = 45/287 (15%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E+ + S L C+ + +G +H ++GL S + NSLI++Y+KC I +
Sbjct: 397 EITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDK------ 450
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
A EVF + P K +S+TS+I+G N EAL
Sbjct: 451 -------------------------ALEVFHRIPNKNVISWTSIILGLRLNYRSFEALFF 485
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIK--LMIDGFVIISTNLLNMY 200
F+ M IL + PN VTL SV+S+ +G + + +H ++ L DGF + LL+MY
Sbjct: 486 FQQM-ILSLKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGF--LPNALLDMY 542
Query: 201 CVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDV----VSWG 256
C + A + F+ E+++ SWN++L G+A+ G LA ELF ++ DV +++
Sbjct: 543 VRCGRMEPAWNQFNSC-EKDVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDEITFT 601
Query: 257 TMIDGYLQVERLSEALTMYRAMLCD-GIAPN---DVMIVDLISACGR 299
+++ + +++ L + +M IAPN +VDL+ GR
Sbjct: 602 SLLCACSRSGMVTDGLEYFESMEHKFHIAPNLKHYASVVDLLGRAGR 648
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 86/340 (25%), Positives = 152/340 (44%), Gaps = 41/340 (12%)
Query: 268 LSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQAT 327
L +AL +M ++ + + L+ C A EG ++HS + K
Sbjct: 75 LEKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSK------------ 122
Query: 328 IIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSW 387
+ RL LG NAL++ F+R G + +A +F M +RD++SW
Sbjct: 123 -----------TVTRLGVRLG--------NALLSMFVRFGDLVEAWYVFGKMAERDLFSW 163
Query: 388 SAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLN 447
+ ++ GYA+ + AL L+H M+ G++P+ T V L GR H +V+
Sbjct: 164 NVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIR 223
Query: 448 NSITLNDNLSAAIIDMYAKCGSINTAFEVFYHI--RDRTTSVSPWNAIICGLAMHGDANL 505
+ ++ A+I MY KCG I +A VF + RDR + WNA+I G +
Sbjct: 224 YGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDRIS----WNAMISGYFENDVCLE 279
Query: 506 TLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLG-ERYFKSMKSVYNVEPDLKHYGCM 564
L+++ + + + + +T V+S C G LG E + +K+ + E + + +
Sbjct: 280 GLRLFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSVNN--SL 337
Query: 565 VDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHG 604
+ + G ++AE V M K D+V W +++ +G
Sbjct: 338 IQMHSSVGCWDEAEMVFSKMEFK-DLVSWTAMISGYEKNG 376
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 119/242 (49%), Gaps = 20/242 (8%)
Query: 6 FHSVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLI 65
F ++F Q+ L + LVS L C+ A+S G++IH+ ++GL + F+ N+L+
Sbjct: 480 FEALFFFQQMILSLKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPNALL 539
Query: 66 NLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDK------TPIKC 119
++Y +CG + A + F+SC D + NI+++GY + + A E+F K P +
Sbjct: 540 DMYVRCGRMEPAWNQFNSCEK-DVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDE- 597
Query: 120 CVSYTSMIMGFAQNDCWREALEVFRDMR-ILGVIPNEVTLASVISSSVHLGGIWECRMLH 178
+++TS++ +++ + LE F M + PN ASV+ LG +
Sbjct: 598 -ITFTSLLCACSRSGMVTDGLEYFESMEHKFHIAPNLKHYASVVDL---LGRAGRLEDAY 653
Query: 179 GLVIKLMIDGFVIISTNLLNMYCVCSSLVE-----ARSLFDEMKERNIVSWNVMLNGFAK 233
+ K+ ID I LLN C VE A+ +F EM +++ + ++ N +A
Sbjct: 654 EFIKKMPIDPDPAIWGALLNA-CRIYQNVELGELAAQHIF-EMDTKSVGYYILLCNLYAD 711
Query: 234 AG 235
+G
Sbjct: 712 SG 713
>gi|297805648|ref|XP_002870708.1| hypothetical protein ARALYDRAFT_493946 [Arabidopsis lyrata subsp.
lyrata]
gi|297316544|gb|EFH46967.1| hypothetical protein ARALYDRAFT_493946 [Arabidopsis lyrata subsp.
lyrata]
Length = 1111
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 155/449 (34%), Positives = 256/449 (57%), Gaps = 4/449 (0%)
Query: 216 MKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMY 275
+K+ ++V V + ++ A ++ +R + + +MI + + ++ Y
Sbjct: 43 LKDDHLVGQFVKAVALSDHTYLDYANQILDRSDKPTLFALNSMIRAHCKSPVPEKSFDFY 102
Query: 276 RAMLC--DGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYA 333
+L +G+ P++ + L+ AC GLQ+H + ++ GFD +Q +I YA
Sbjct: 103 SRILSSGNGLKPDNYTVNFLVQACTGLGMRETGLQVHGMTIRRGFDNDPHVQTGLISLYA 162
Query: 334 ACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISG 393
G ++ F A++ R G + AR+LF M ++D +W+AMISG
Sbjct: 163 ELGCLDSCHKVFNSVSYPDFVCRTAMVTACARCGDVAFARKLFEGMPEKDPIAWNAMISG 222
Query: 394 YAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLN 453
YAQ + AL LFH M GVK N ++M+SV A G L +GRWAH Y+ N I +
Sbjct: 223 YAQVGESREALNLFHLMQLEGVKVNGVSMISVLSACTQLGALDQGRWAHSYIERNKIKIT 282
Query: 454 DNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDL 513
L ++D+YAKCG ++ A EVF+ + ++ +V W++ + GLAM+G LK++S +
Sbjct: 283 VRLGTTLVDLYAKCGDMDKAMEVFWGMEEK--NVYTWSSALNGLAMNGFGEKCLKLFSLM 340
Query: 514 EKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQ 573
++ + N++TF+ VL C G VD G+++F SM++ + +EP L HYGC+VDL RAG+
Sbjct: 341 KQDGVTPNAVTFVSVLRGCSVVGFVDEGQKHFDSMRNEFGIEPQLDHYGCLVDLYARAGR 400
Query: 574 LEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNI 633
LEDA +I+ MPMKA +W +LL ASR++ N+E+G A+K + L+ S+ + VLLSNI
Sbjct: 401 LEDAVSIIQQMPMKAHAAVWSSLLHASRMYKNLELGVLASKKMLELETSNHGAYVLLSNI 460
Query: 634 YADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
YAD+ W++ +R+ M+ G+++ PG S
Sbjct: 461 YADSDDWDNVSHVRQSMKSKGVRKQPGCS 489
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 114/381 (29%), Positives = 195/381 (51%), Gaps = 33/381 (8%)
Query: 282 GIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLA 341
G PN+V + +ISAC EG+ IH +++K+G
Sbjct: 632 GFRPNEVTFLSMISACVHGGNKEEGVCIHGLVMKSG------------------------ 667
Query: 342 RLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPN 401
+ + + NAL+ + + G + + +LF ++ +++ SW+ MI + QN
Sbjct: 668 -------VLEEVKVVNALMNLYGKTGDLISSCKLFEDLSVKNLVSWNTMIVIHLQNGLAE 720
Query: 402 MALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAII 461
L F+ G+KP++ T ++V G ++ + H ++ N ++ A++
Sbjct: 721 EGLAYFNMSRWVGLKPDQATFLAVLRVCEDIGVVRLSQGIHGLIMFCGFNANTCITTALL 780
Query: 462 DMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLN 521
D+YAK G + + VF I + W A++ A HG +K + + + +
Sbjct: 781 DLYAKLGRLEDSSTVFLEIT--SPDSMAWTAMLAAYATHGYGRDAIKHFELMVHYGLSPD 838
Query: 522 SITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVI 581
+TF +L+ C H+GLV+ G YF++M Y +EP L HY CMVDL+GR+G L+DA +I
Sbjct: 839 HVTFTHLLNACSHSGLVEEGRYYFETMSKRYRIEPRLDHYSCMVDLMGRSGLLQDAYGLI 898
Query: 582 RSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWE 641
+ MPM+ +WG LL A R++ + ++G +AAK L L+P G + ++LSNIY+ +G W+
Sbjct: 899 KEMPMEPSSGVWGALLGACRVYKDTQLGTKAAKRLFELEPRDGRNYIMLSNIYSASGLWK 958
Query: 642 DAFSIRKEMRDCGMKRLPGFS 662
DA IR M+ G+ R G+S
Sbjct: 959 DASRIRNLMKQKGLVRASGYS 979
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 106/454 (23%), Positives = 198/454 (43%), Gaps = 60/454 (13%)
Query: 77 AKSMFDSCSTLDPVA---CNIMISGYIRNDRL----------------NDAREVFDKTPI 117
A S+ DS +T + + + G +++D L + A ++ D++
Sbjct: 17 AISLLDSGTTFKEIRQIHAKLYVDGTLKDDHLVGQFVKAVALSDHTYLDYANQILDRSDK 76
Query: 118 KCCVSYTSMIMGFAQNDCWREALEVFRDMRIL----GVIPNEVTLASVISSSVHLGGIWE 173
+ SMI ++ ++ + + RIL G+ P+ T+ ++ + LG
Sbjct: 77 PTLFALNSMIRAHCKSPVPEKSFDFYS--RILSSGNGLKPDNYTVNFLVQACTGLGMRET 134
Query: 174 CRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAK 233
+HG+ I+ D + T L+++Y L +F+ + + V M+ A+
Sbjct: 135 GLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSVSYPDFVCRTAMVTACAR 194
Query: 234 AGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDL 293
G V AR+LFE +P KD ++W MI GY QV EAL ++ M +G+ N V ++ +
Sbjct: 195 CGDVAFARKLFEGMPEKDPIAWNAMISGYAQVGESREALNLFHLMQLEGVKVNGVSMISV 254
Query: 294 ISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHI 353
+SAC + A +G HS I + + T++ YA CG
Sbjct: 255 LSACTQLGALDQGRWAHSYIERNKIKITVRLGTTLVDLYAKCGD---------------- 298
Query: 354 ASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDA 413
++ A ++F M++++VY+WS+ ++G A N L+LF M
Sbjct: 299 ---------------MDKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLKLFSLMKQD 343
Query: 414 GVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLS--AAIIDMYAKCGSIN 471
GV PN +T VSV + G + EG+ H + N + L ++D+YA+ G +
Sbjct: 344 GVTPNAVTFVSVLRGCSVVGFVDEGQ-KHFDSMRNEFGIEPQLDHYGCLVDLYARAGRLE 402
Query: 472 TAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANL 505
A + + + + + W++++ M+ + L
Sbjct: 403 DAVSIIQQMPMKAHA-AVWSSLLHASRMYKNLEL 435
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 93/358 (25%), Positives = 166/358 (46%), Gaps = 37/358 (10%)
Query: 6 FHSVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLI 65
F+S S L+ +Y + + ++ C+ G Q+H + + G +++ +Q LI
Sbjct: 101 FYSRILSSGNGLKPDNYTVNFL--VQACTGLGMRETGLQVHGMTIRRGFDNDPHVQTGLI 158
Query: 66 NLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTS 125
+LYA+ G + +F+S S D V M++ R + AR++F+ P K +++ +
Sbjct: 159 SLYAELGCLDSCHKVFNSVSYPDFVCRTAMVTACARCGDVAFARKLFEGMPEKDPIAWNA 218
Query: 126 MIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLM 185
MI G+AQ REAL +F M++ GV N V++ SV+S+ LG + + R H + +
Sbjct: 219 MISGYAQVGESREALNLFHLMQLEGVKVNGVSMISVLSACTQLGALDQGRWAHSYIERNK 278
Query: 186 IDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFE 245
I V + T L+++Y C + +A +F M+E+N+ +W+ LNG A G E
Sbjct: 279 IKITVRLGTTLVDLYAKCGDMDKAMEVFWGMEEKNVYTWSSALNGLAMNGFGE------- 331
Query: 246 RIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGE 305
+ L ++ M DG+ PN V V ++ C E
Sbjct: 332 ------------------------KCLKLFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDE 367
Query: 306 GLQIHSIIVKAGFDCYDFIQ--ATIIHFYAACGRINLA-RLQFELGIKDHIASWNALI 360
G Q H ++ F + ++ YA GR+ A + ++ +K H A W++L+
Sbjct: 368 G-QKHFDSMRNEFGIEPQLDHYGCLVDLYARAGRLEDAVSIIQQMPMKAHAAVWSSLL 424
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 85/374 (22%), Positives = 152/374 (40%), Gaps = 69/374 (18%)
Query: 149 LGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVE 208
+G PNEVT S+IS+ VH G E +HGLV+K + V + L+N+Y L+
Sbjct: 631 VGFRPNEVTFLSMISACVHGGNKEEGVCIHGLVMKSGVLEEVKVVNALMNLYGKTGDLIS 690
Query: 209 ARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERL 268
+ LF+++ +N+VSWN M+ + GL E
Sbjct: 691 SCKLFEDLSVKNLVSWNTMIVIHLQNGLAE------------------------------ 720
Query: 269 SEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATI 328
E L + G+ P+ + ++ C IH +I+ GF+ I +
Sbjct: 721 -EGLAYFNMSRWVGLKPDQATFLAVLRVCEDIGVVRLSQGIHGLIMFCGFNANTCITTAL 779
Query: 329 IHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWS 388
+ YA GR +ED+ +F + D +W+
Sbjct: 780 LDLYAKLGR-------------------------------LEDSSTVFLEITSPDSMAWT 808
Query: 389 AMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNN 448
AM++ YA + A++ F MV G+ P+ +T + A + SG ++EGR+ E ++
Sbjct: 809 AMLAAYATHGYGRDAIKHFELMVHYGLSPDHVTFTHLLNACSHSGLVEEGRYYFE-TMSK 867
Query: 449 SITLNDNLS--AAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLT 506
+ L + ++D+ + G + A+ + + +S W A++ ++ D L
Sbjct: 868 RYRIEPRLDHYSCMVDLMGRSGLLQDAYGLIKEMPMEPSS-GVWGALLGACRVYKDTQLG 926
Query: 507 LKIYS---DLEKRN 517
K +LE R+
Sbjct: 927 TKAAKRLFELEPRD 940
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 114/284 (40%), Gaps = 62/284 (21%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E+ +S + C +G IH L+ KSG+ + N+L+NLY K G +
Sbjct: 637 EVTFLSMISACVHGGNKEEGVCIHGLVMKSGVLEEVKVVNALMNLYGKTG------DLIS 690
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
SC ++F+ +K VS+ +MI+ QN E L
Sbjct: 691 SC-------------------------KLFEDLSVKNLVSWNTMIVIHLQNGLAEEGLAY 725
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
F R +G+ P++ T +V+ +G + + +HGL++ + I+T LL++Y
Sbjct: 726 FNMSRWVGLKPDQATFLAVLRVCEDIGVVRLSQGIHGLIMFCGFNANTCITTALLDLY-- 783
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
AK G +E + +F I S D ++W M+ Y
Sbjct: 784 -----------------------------AKLGRLEDSSTVFLEITSPDSMAWTAMLAAY 814
Query: 263 LQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEG 306
+A+ + M+ G++P+ V L++AC + EG
Sbjct: 815 ATHGYGRDAIKHFELMVHYGLSPDHVTFTHLLNACSHSGLVEEG 858
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 97/218 (44%), Gaps = 14/218 (6%)
Query: 412 DAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSIN 471
+ G +PNE+T +S+ A G +EG H V+ + + + A++++Y K G +
Sbjct: 630 EVGFRPNEVTFLSMISACVHGGNKEEGVCIHGLVMKSGVLEEVKVVNALMNLYGKTGDLI 689
Query: 472 TAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLST 531
++ ++F + ++ WN +I +G A L ++ +K + TF+ VL
Sbjct: 690 SSCKLFEDL--SVKNLVSWNTMIVIHLQNGLAEEGLAYFNMSRWVGLKPDQATFLAVLRV 747
Query: 532 CCHAGLVDLGER-YFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADV 590
C G+V L + + M +N + ++DL + G+LED+ V + D
Sbjct: 748 CEDIGVVRLSQGIHGLIMFCGFNANTCIT--TALLDLYAKLGRLEDSSTVFLEIT-SPDS 804
Query: 591 VIWGTLLAASRIHGNVEVGERAAKSLA-----GLQPSH 623
+ W +LAA HG G A K GL P H
Sbjct: 805 MAWTAMLAAYATHG---YGRDAIKHFELMVHYGLSPDH 839
>gi|359493517|ref|XP_002264078.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g33350-like [Vitis vinifera]
Length = 573
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 157/438 (35%), Positives = 254/438 (57%), Gaps = 17/438 (3%)
Query: 240 ARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIA-PNDVMIVDLISACG 298
AR +F+ + S +V + MI Y + AL +YR M+ PN + ++ +C
Sbjct: 107 ARFIFDHVESPNVYLYTAMITAYASHSDHTSALLLYRNMVRRRRPWPNHFIYPHVLKSCT 166
Query: 299 RAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAA-CGRINLARLQFELGIKDHIASWN 357
+ + G +H ++++GF+ Y +Q ++ Y + ARL F+ + ++ SW
Sbjct: 167 QVVGPGSARMVHCQVLRSGFEQYPVVQTALLDAYLRFWSDVESARLLFDEMTERNVVSWT 226
Query: 358 ALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGM--VDAGV 415
A+I+G+ R G I +A LF M +RDV SW+A+I+GY QN AL LF M V+AG
Sbjct: 227 AMISGYTRLGQIGNAVLLFEEMPERDVPSWNALIAGYTQNGLFMEALSLFRRMIAVEAGA 286
Query: 416 -----KPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSI 470
+PN++T V A +G L+ G+W H YV N + L+ +S A++DMY KCG +
Sbjct: 287 WGQGNRPNQVTAVCSLSACGHTGMLRLGKWIHGYVYRNGLGLDSFVSNALVDMYGKCGCL 346
Query: 471 NTAFEVFYHIRDRT--TSVSPWNAIICGLAMHGDANLTLKIYSDLEK--RNIKLNSITFI 526
A VF DRT S++ WN++I LA+HG + + ++ ++ +K + +TFI
Sbjct: 347 KEARRVF----DRTLERSLTSWNSMINCLALHGQSQNAISVFEEMMTCGSGVKPDEVTFI 402
Query: 527 GVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPM 586
G+L+ C H GLV+ G YF+ M Y +EP ++HYGC+VDLLGRAGQ E+A EV+R M +
Sbjct: 403 GLLNACTHGGLVEKGWLYFELMTQNYGIEPQIEHYGCLVDLLGRAGQFEEAMEVVRGMRI 462
Query: 587 KADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSI 646
+ D VIWG+LL +IHG+ ++ E + K L + P++G ++L+NIY + G+W++ +
Sbjct: 463 EPDEVIWGSLLNGCKIHGHTDLAEFSIKKLIDMDPNNGGYGIMLANIYGELGKWDEVRKV 522
Query: 647 RKEMRDCGMKRLPGFSGV 664
RK +++ + PG S +
Sbjct: 523 RKVLKEQNAHKTPGCSWI 540
Score = 171 bits (434), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 128/477 (26%), Positives = 213/477 (44%), Gaps = 50/477 (10%)
Query: 60 IQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRN-----DRLNDAREVFDK 114
+ NS++ L +C ++ K + TL + +R L+ AR +FD
Sbjct: 54 LNNSVLALLERCIHLNHLKQLQAFLITLGHAQTHFYAFKLLRFCTLALSNLSYARFIFDH 113
Query: 115 TPIKCCVSYTSMIMGFAQNDCWREALEVFRDM-RILGVIPNEVTLASVISSSVHLGGIWE 173
YT+MI +A + AL ++R+M R PN V+ S + G
Sbjct: 114 VESPNVYLYTAMITAYASHSDHTSALLLYRNMVRRRRPWPNHFIYPHVLKSCTQVVGPGS 173
Query: 174 CRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVE-ARSLFDEMKERNIVSWNVMLNGFA 232
RM+H V++ + + ++ T LL+ Y S VE AR LFDEM ERN+VSW M++G+
Sbjct: 174 ARMVHCQVLRSGFEQYPVVQTALLDAYLRFWSDVESARLLFDEMTERNVVSWTAMISGYT 233
Query: 233 KAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLC-------DGIAP 285
+ G + A LFE +P +DV SW +I GY Q EAL+++R M+ G P
Sbjct: 234 RLGQIGNAVLLFEEMPERDVPSWNALIAGYTQNGLFMEALSLFRRMIAVEAGAWGQGNRP 293
Query: 286 NDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQF 345
N V V +SACG G IH + + G F+ ++ Y CG + AR F
Sbjct: 294 NQVTAVCSLSACGHTGMLRLGKWIHGYVYRNGLGLDSFVSNALVDMYGKCGCLKEARRVF 353
Query: 346 ELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALE 405
+ ++ + SWN++I +G ++A +F M M G
Sbjct: 354 DRTLERSLTSWNSMINCLALHGQSQNAISVFEEM----------MTCG------------ 391
Query: 406 LFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLS--AAIIDM 463
+GVKP+E+T + + A G +++G W + ++ + + + ++D+
Sbjct: 392 -------SGVKPDEVTFIGLLNACTHGGLVEKG-WLYFELMTQNYGIEPQIEHYGCLVDL 443
Query: 464 YAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANL---TLKIYSDLEKRN 517
+ G A EV +R V W +++ G +HG +L ++K D++ N
Sbjct: 444 LGRAGQFEEAMEVVRGMRIEPDEVI-WGSLLNGCKIHGHTDLAEFSIKKLIDMDPNN 499
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/376 (25%), Positives = 167/376 (44%), Gaps = 74/376 (19%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAK-CGLISQAKSMFDSCSTLD 88
L+ C+ + + +H + +SG E +Q +L++ Y + + A+ +FD + +
Sbjct: 162 LKSCTQVVGPGSARMVHCQVLRSGFEQYPVVQTALLDAYLRFWSDVESARLLFDEMTERN 221
Query: 89 PVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRI 148
V+ MISGY R ++ +A +F++ P + S+ ++I G+ QN + EAL +FR M
Sbjct: 222 VVSWTAMISGYTRLGQIGNAVLLFEEMPERDVPSWNALIAGYTQNGLFMEALSLFRRMIA 281
Query: 149 L-------GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIK--LMIDGFVIISTNLLNM 199
+ G PN+VT +S+ H G + + +HG V + L +D FV S L++M
Sbjct: 282 VEAGAWGQGNRPNQVTAVCSLSACGHTGMLRLGKWIHGYVYRNGLGLDSFV--SNALVDM 339
Query: 200 YCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMI 259
Y C L EAR +FD ER++ SWN M+N A G + A +FE +
Sbjct: 340 YGKCGCLKEARRVFDRTLERSLTSWNSMINCLALHGQSQNAISVFEEM------------ 387
Query: 260 DGYLQVERLSEALTMYRAMLC-DGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGF 318
M C G+ P++V + L++AC H +V+ G+
Sbjct: 388 ------------------MTCGSGVKPDEVTFIGLLNAC-----------THGGLVEKGW 418
Query: 319 DCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNN 378
++ + GI+ I + L+ R G E+A ++
Sbjct: 419 LYFELMTQN-------------------YGIEPQIEHYGCLVDLLGRAGQFEEAMEVVRG 459
Query: 379 MQ-KRDVYSWSAMISG 393
M+ + D W ++++G
Sbjct: 460 MRIEPDEVIWGSLLNG 475
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 104/242 (42%), Gaps = 45/242 (18%)
Query: 19 NSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAK 78
N ++ V +L C + G+ IH ++++GL ++F+ N+L+++Y KCG + +
Sbjct: 291 NRPNQVTAVCSLSACGHTGMLRLGKWIHGYVYRNGLGLDSFVSNALVDMYGKCGCLKE-- 348
Query: 79 SMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWRE 138
AR VFD+T + S+ SMI A + +
Sbjct: 349 -----------------------------ARRVFDRTLERSLTSWNSMINCLALHGQSQN 379
Query: 139 ALEVFRDMRIL--GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNL 196
A+ VF +M GV P+EVT ++++ H GG+ E L+ +LM + I +
Sbjct: 380 AISVFEEMMTCGSGVKPDEVTFIGLLNACTH-GGLVEKGWLY---FELMTQNYG-IEPQI 434
Query: 197 LNMYCVCSSLVEARSLFDEMK-------ERNIVSWNVMLNGFAKAGLVELARELFERIPS 249
+ C+ L A + M+ E + V W +LNG G +LA +++
Sbjct: 435 EHYGCLVDLLGRAGQFEEAMEVVRGMRIEPDEVIWGSLLNGCKIHGHTDLAEFSIKKLID 494
Query: 250 KD 251
D
Sbjct: 495 MD 496
>gi|449437256|ref|XP_004136408.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 632
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 154/417 (36%), Positives = 242/417 (58%), Gaps = 5/417 (1%)
Query: 251 DVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPN--DVMIVDLISACGRAMAFGEGLQ 308
++ ++ ++ + Q ++ + L APN + ++ AC EG +
Sbjct: 89 NIFAYNALLKAFSQHNAWHTTISYFNNQLVLPNAPNPDEYTFTSVLKACAGLAQVLEGQK 148
Query: 309 IHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGM 368
+H + K G + F++ +++ Y G +A+ F+ + + SWN LI+G+ +GM
Sbjct: 149 VHCFVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKLFDEMVVRDVVSWNTLISGYCFSGM 208
Query: 369 IEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMV-DAGVKPNEITMVSVFC 427
++ AR +F+ M ++++ SWS MISGYA+NE+ A+ELF M + G+ PN++T+VSV
Sbjct: 209 VDKARMVFDGMMEKNLVSWSTMISGYARNEKYADAIELFRQMQHEGGLAPNDVTLVSVLS 268
Query: 428 AIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSV 487
A A G L G+W H ++ N I + L A+ DMYAKCG + A VF+ + +R V
Sbjct: 269 ACAHLGALDLGKWIHRFIRRNKIEVGLFLGNALADMYAKCGCVLEAKGVFHEMHER--DV 326
Query: 488 SPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKS 547
W+ II GLAM+G AN ++++ + ++ N I+F+G+L+ C HAGLVD G YF
Sbjct: 327 ISWSIIIMGLAMYGYANEAFNFFAEMIEDGLEPNDISFMGLLTACTHAGLVDKGLEYFDM 386
Query: 548 MKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVE 607
M VY + P ++HYGC+VDLL RAG+L+ AE +I SMPM+ +V++WG LL RI+ + E
Sbjct: 387 MPQVYGITPKIEHYGCVVDLLSRAGRLDQAESLINSMPMQPNVIVWGALLGGCRIYKDAE 446
Query: 608 VGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
GER + L +H S V L+N+YA GR +DA S R MRD + PG S +
Sbjct: 447 RGERVVWRILELDSNHSGSLVYLANVYASMGRLDDAASCRLRMRDNKSMKTPGCSWI 503
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 114/390 (29%), Positives = 190/390 (48%), Gaps = 66/390 (16%)
Query: 8 SVFNSQK--ANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLI 65
S FN+Q N N D E S L+ C+ V +GQ++H + K G ESN F++NSL+
Sbjct: 111 SYFNNQLVLPNAPNPD-EYTFTSVLKACAGLAQVLEGQKVHCFVTKYGCESNLFVRNSLV 169
Query: 66 NLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTS 125
+LY K G A+ +FD D V+ N +ISGY + ++ AR VFD K VS+++
Sbjct: 170 DLYFKVGCNCIAQKLFDEMVVRDVVSWNTLISGYCFSGMVDKARMVFDGMMEKNLVSWST 229
Query: 126 MIMGFAQNDCWREALEVFRDMRIL-GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKL 184
MI G+A+N+ + +A+E+FR M+ G+ PN+VTL SV+S+ HLG + + +H + +
Sbjct: 230 MISGYARNEKYADAIELFRQMQHEGGLAPNDVTLVSVLSACAHLGALDLGKWIHRFIRRN 289
Query: 185 MIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELF 244
I+ + + L +MY C ++EA+ +F EM ER+++SW++++ G A G
Sbjct: 290 KIEVGLFLGNALADMYAKCGCVLEAKGVFHEMHERDVISWSIIIMGLAMYGYA------- 342
Query: 245 ERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFG 304
+EA + M+ DG+ PND+ + L++AC
Sbjct: 343 ------------------------NEAFNFFAEMIEDGLEPNDISFMGLLTAC------- 371
Query: 305 EGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFI 364
H+ +V G + +D + GI I + ++
Sbjct: 372 ----THAGLVDKGLEYFDMMPQV-------------------YGITPKIEHYGCVVDLLS 408
Query: 365 RNGMIEDARQLFNNMQ-KRDVYSWSAMISG 393
R G ++ A L N+M + +V W A++ G
Sbjct: 409 RAGRLDQAESLINSMPMQPNVIVWGALLGG 438
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 104/386 (26%), Positives = 190/386 (49%), Gaps = 36/386 (9%)
Query: 122 SYTSMIMGFAQNDCWREALEVFRDMRILGVIPN--EVTLASVISSSVHLGGIWECRMLHG 179
+Y +++ F+Q++ W + F + +L PN E T SV+ + L + E + +H
Sbjct: 92 AYNALLKAFSQHNAWHTTISYFNNQLVLPNAPNPDEYTFTSVLKACAGLAQVLEGQKVHC 151
Query: 180 LVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVEL 239
V K + + + +L+++Y A+ LFDEM R++VSWN +++G+ +G+V+
Sbjct: 152 FVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKLFDEMVVRDVVSWNTLISGYCFSGMVDK 211
Query: 240 ARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDG-IAPNDVMIVDLISACG 298
AR +F+ + K++VSW TMI GY + E+ ++A+ ++R M +G +APNDV +V ++SAC
Sbjct: 212 ARMVFDGMMEKNLVSWSTMISGYARNEKYADAIELFRQMQHEGGLAPNDVTLVSVLSACA 271
Query: 299 RAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNA 358
A G IH I + + F+ + YA C
Sbjct: 272 HLGALDLGKWIHRFIRRNKIEVGLFLGNALADMYAKC----------------------- 308
Query: 359 LIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPN 418
G + +A+ +F+ M +RDV SWS +I G A N A F M++ G++PN
Sbjct: 309 --------GCVLEAKGVFHEMHERDVISWSIIIMGLAMYGYANEAFNFFAEMIEDGLEPN 360
Query: 419 EITMVSVFCAIASSGTLKEGRWAHEYVLN-NSITLNDNLSAAIIDMYAKCGSINTAFEVF 477
+I+ + + A +G + +G + + IT ++D+ ++ G ++ A E
Sbjct: 361 DISFMGLLTACTHAGLVDKGLEYFDMMPQVYGITPKIEHYGCVVDLLSRAGRLDQA-ESL 419
Query: 478 YHIRDRTTSVSPWNAIICGLAMHGDA 503
+ +V W A++ G ++ DA
Sbjct: 420 INSMPMQPNVIVWGALLGGCRIYKDA 445
>gi|413953302|gb|AFW85951.1| hypothetical protein ZEAMMB73_518426 [Zea mays]
Length = 620
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 177/562 (31%), Positives = 301/562 (53%), Gaps = 53/562 (9%)
Query: 104 RLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF--RDMRILGVIPNEVTLASV 161
R+ DAR++FD TP + VS+T+++ +A+ R+A +F D R N VT ++
Sbjct: 55 RVWDARKLFDGTPERDVVSWTALVSAYARRGMLRDARSLFDRSDAR-----RNVVTWTAL 109
Query: 162 ISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNI 221
+S G + E +L + M V+ +L Y V +A +LFD M R+
Sbjct: 110 LSGYARAGLVDEAEVL----FQRMPQRNVVSWNTMLEAYAVAGRAGDACALFDRMPVRDA 165
Query: 222 VSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCD 281
SWN++L ++G V+ ARELF R+P +DV++W TM+DG + + EA ++ +M
Sbjct: 166 GSWNILLAMLVRSGSVDKARELFGRMPERDVMAWTTMVDGVARSGNVDEARLLFDSMPER 225
Query: 282 GIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLA 341
+ + MI S R E L + +
Sbjct: 226 NVVSWNAMI----SGYTRNHRLDEALDLFT------------------------------ 251
Query: 342 RLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPN 401
++ +D IAS N +I GFI+N ++ AR+LF+ M +R+V +W+ M++GY + +Q
Sbjct: 252 ----KMPHRD-IASCNIMITGFIQNKDLKRARKLFDEMPERNVVTWTTMMNGYLKGKQSE 306
Query: 402 MALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAII 461
++L LF GM+ +G++PN++T + A + TL EG+ H+ + + ++ + +A++
Sbjct: 307 LSLGLFRGMLMSGIRPNQVTFLGALDACSDLATLCEGKQVHQMICKTAFQVDTFVGSALM 366
Query: 462 DMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLN 521
++YAKCG + A ++F R++ + WN II A HG + +Y ++ + N
Sbjct: 367 NVYAKCGEVGLARKLFDLSREK--DLISWNGIIAAYAHHGVGIEAIHLYEKMQGNGYRPN 424
Query: 522 SITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVI 581
+T++ +LS C H+GLVD G + F+SM + ++ +HY C++DL RAG+L+DA+ +I
Sbjct: 425 DVTYVVLLSACSHSGLVDEGLKIFESMVNDRSIAVRDEHYTCLIDLCSRAGRLDDAKRLI 484
Query: 582 RSMPMK-ADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRW 640
+ +K A +W LL HGN +G AA++L +P + + LLSNIYA AG+W
Sbjct: 485 HYLKIKPASGSVWSALLGGCNAHGNESIGNLAARNLIQAEPDNAGTYTLLSNIYASAGKW 544
Query: 641 EDAFSIRKEMRDCGMKRLPGFS 662
++A IR EM + G+K+ PG S
Sbjct: 545 KEAAEIRSEMNNRGLKKQPGCS 566
Score = 202 bits (514), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 136/513 (26%), Positives = 249/513 (48%), Gaps = 51/513 (9%)
Query: 9 VFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLY 68
V++++K L + E +VS SA+ + SL +S N +L++ Y
Sbjct: 56 VWDARK--LFDGTPERDVVSWTALVSAYARRGMLRDARSLFDRSDARRNVVTWTALLSGY 113
Query: 69 AKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIM 128
A+ GL+ +A+ +F + V+ N M+ Y R DA +FD+ P++ S+ ++
Sbjct: 114 ARAGLVDEAEVLFQRMPQRNVVSWNTMLEAYAVAGRAGDACALFDRMPVRDAGSWNILLA 173
Query: 129 GFAQNDCWREALEVFRDMRILGVIPNEVTLA--SVISSSVHLGGIWECRMLHGLVIKLMI 186
++ +A E+F G +P +A +++ G + E R+L M
Sbjct: 174 MLVRSGSVDKARELF------GRMPERDVMAWTTMVDGVARSGNVDEARLL----FDSMP 223
Query: 187 DGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFER 246
+ V+ +++ Y L EA LF +M R+I S N+M+ GF + ++ AR+LF+
Sbjct: 224 ERNVVSWNAMISGYTRNHRLDEALDLFTKMPHRDIASCNIMITGFIQNKDLKRARKLFDE 283
Query: 247 IPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEG 306
+P ++VV+W TM++GYL+ ++ +L ++R ML GI PN V + + AC EG
Sbjct: 284 MPERNVVTWTTMMNGYLKGKQSELSLGLFRGMLMSGIRPNQVTFLGALDACSDLATLCEG 343
Query: 307 LQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRN 366
Q+H +I K F F+ + +++ YA CG + LAR F+L + + SWN +IA + +
Sbjct: 344 KQVHQMICKTAFQVDTFVGSALMNVYAKCGEVGLARKLFDLSREKDLISWNGIIAAYAHH 403
Query: 367 GMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVF 426
G+ +A L+ MQ G +PN++T V +
Sbjct: 404 GVGIEAIHLYEKMQGN-------------------------------GYRPNDVTYVVLL 432
Query: 427 CAIASSGTLKEGRWAHEYVLNN-SITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTT 485
A + SG + EG E ++N+ SI + D +ID+ ++ G ++ A + ++++ +
Sbjct: 433 SACSHSGLVDEGLKIFESMVNDRSIAVRDEHYTCLIDLCSRAGRLDDAKRLIHYLKIKPA 492
Query: 486 SVSPWNAIICGLAMHGDANLTLKIYSDLEKRNI 518
S S W+A++ G HG+ ++ +L RN+
Sbjct: 493 SGSVWSALLGGCNAHGNESI-----GNLAARNL 520
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 126/267 (47%), Gaps = 23/267 (8%)
Query: 333 AACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ-KRDVYSWSAMI 391
AA GR+ AR F+ + + SW AL++ + R GM+ DAR LF+ +R+V +W+A++
Sbjct: 51 AAAGRVWDARKLFDGTPERDVVSWTALVSAYARRGMLRDARSLFDRSDARRNVVTWTALL 110
Query: 392 SGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSIT 451
SGYA+ + A LF M V TM+ + A+A GR L + +
Sbjct: 111 SGYARAGLVDEAEVLFQRMPQRNVVSWN-TMLEAY-AVA-------GRAGDACALFDRMP 161
Query: 452 LNDNLSAAI-IDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIY 510
+ D S I + M + GS++ A E+F + +R V W ++ G+A G+ + ++
Sbjct: 162 VRDAGSWNILLAMLVRSGSVDKARELFGRMPER--DVMAWTTMVDGVARSGNVDEARLLF 219
Query: 511 SDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGR 570
+ +RN+ +++ ++S +D F M D+ M+ +
Sbjct: 220 DSMPERNV----VSWNAMISGYTRNHRLDEALDLFTKMP-----HRDIASCNIMITGFIQ 270
Query: 571 AGQLEDAEEVIRSMPMKADVVIWGTLL 597
L+ A ++ MP + +VV W T++
Sbjct: 271 NKDLKRARKLFDEMPER-NVVTWTTMM 296
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 102/243 (41%), Gaps = 50/243 (20%)
Query: 357 NALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVK 416
N LI G + DAR+LF+ +RDV SW+A++S YA+ A LF + +
Sbjct: 44 NRLIVDLAAAGRVWDARKLFDGTPERDVVSWTALVSAYARRGMLRDARSLFD---RSDAR 100
Query: 417 PNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEV 476
N +T W A++ YA+ G ++ A +
Sbjct: 101 RNVVT------------------W-----------------TALLSGYARAGLVDEAEVL 125
Query: 477 FYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAG 536
F + R +V WN ++ A+ G A ++ + R+ +I +L+ +G
Sbjct: 126 FQRMPQR--NVVSWNTMLEAYAVAGRAGDACALFDRMPVRDAGSWNI----LLAMLVRSG 179
Query: 537 LVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTL 596
VD F M E D+ + MVD + R+G +++A + SMP + +VV W +
Sbjct: 180 SVDKARELFGRMP-----ERDVMAWTTMVDGVARSGNVDEARLLFDSMPER-NVVSWNAM 233
Query: 597 LAA 599
++
Sbjct: 234 ISG 236
>gi|225427607|ref|XP_002269121.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19220,
mitochondrial [Vitis vinifera]
Length = 828
Score = 297 bits (760), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 200/671 (29%), Positives = 343/671 (51%), Gaps = 86/671 (12%)
Query: 39 VSQGQQIHSLIFKSGLE--SNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMI 96
+S GQ IH K G + S+ +NSLI+LY++C I A+ +F
Sbjct: 190 LSFGQVIHGWGIKLGYKDISHNSFENSLISLYSQCRDIQAAEILFK-------------- 235
Query: 97 SGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVI-PNE 155
+ K VS+ +M+ G A N EA ++ +M++LG + P+
Sbjct: 236 -----------------EMKYKDIVSWNAMLDGLALNQRIWEAFDLLHEMQLLGCVQPDS 278
Query: 156 VTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDE 215
VT+ +I L + E R +HGL ++ + ++ +L++MY C + A +F
Sbjct: 279 VTVVIIIPLCAELMLLREGRAVHGLTLRREMGLDFSVTNSLIDMYSKCKDVKRAEHVFKA 338
Query: 216 MKERNIVSWNVMLNGFAKAGLVELARELFER-IPSKDVVSWGTMIDGYLQVERLSEALTM 274
+ ER++VSWN M++G+++ G A+ LF + + S S T++ L SE L
Sbjct: 339 IPERDLVSWNAMISGYSQNGHSREAQHLFRQLLQSYSQCSLSTLL-AILPSCDSSEFLQF 397
Query: 275 YRAMLC---------DGIAPNDVMIV-----DLIS----------------------ACG 298
++ C + +A N +M++ DL++ C
Sbjct: 398 GESIHCWQLKLGFANNPLAVNSLMLMYINCGDLVACFSLLQTVSAAADIVCWNTVMAGCT 457
Query: 299 RAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRI-------NLARLQFELGIKD 351
+ F E L+ +++ + C+D + + + +ACG + +L L + ++
Sbjct: 458 QNGHFWEALKAFNLMRQDPDVCHDSV--ALFNVISACGNLELLFAGGSLHGLALKTLMES 515
Query: 352 HIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMV 411
I NALI + R G IE+AR +F R++ SW+ MIS ++QN+ ALELF
Sbjct: 516 DIRVQNALITMYGRCGEIENARIIFGFSCNRNLCSWNCMISAFSQNKDGRRALELF---C 572
Query: 412 DAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSIN 471
+PNEIT+V + A G L+ G+ H +V+ + + N +SAA+ DMY+ CG ++
Sbjct: 573 HIEFEPNEITIVGILSACTQLGVLRHGKQIHGHVIRSRLQGNSFVSAALEDMYSNCGRLD 632
Query: 472 TAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLST 531
TAF++F +R SV+ WN++I H + ++++ ++ + + TFI +LS
Sbjct: 633 TAFQIFQSSPER--SVAAWNSMISAFGFHSNGGKAIELFHEMRECGTRPTKSTFISLLSA 690
Query: 532 CCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVV 591
C H+GLV+ G Y+ +M ++NVE D +H+ CMVD+LGRAG+L +A E IR MP + +
Sbjct: 691 CSHSGLVNEGLWYYSNMLELFNVEADTEHHVCMVDMLGRAGRLGEAYEFIRQMPTQPEPG 750
Query: 592 IWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMR 651
+WG LL+A HG++++G A+ L L+P + + LSN+Y AGRW+DA +R+ ++
Sbjct: 751 VWGALLSACSYHGDLKMGREVAELLFELEPENVGYYISLSNMYVAAGRWKDAVELRRIIQ 810
Query: 652 DCGMKRLPGFS 662
D G+K+ +S
Sbjct: 811 DKGLKKPAAYS 821
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 132/575 (22%), Positives = 250/575 (43%), Gaps = 109/575 (18%)
Query: 34 SAHIA-VSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVAC 92
S+H+ ++QG+ +H + FK+GL S++F+ N+LI++YAKCG +S ++ +F D
Sbjct: 83 SSHMGNLTQGRVLHGISFKTGLLSDSFLCNALIDMYAKCGELSSSECVFGGMEYRD---- 138
Query: 93 NIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVI 152
+S+ SM+ G A N+ +++L F+ M
Sbjct: 139 ---------------------------IISWNSMMRGCAYNNYPKKSLWYFKKMAYSSEQ 171
Query: 153 PNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTN-----LLNMYCVCSSLV 207
+ V+L +S+S LG + +++HG IKL G+ IS N L+++Y C +
Sbjct: 172 ADNVSLTCAVSASALLGELSFGQVIHGWGIKL---GYKDISHNSFENSLISLYSQCRDIQ 228
Query: 208 EARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVER 267
A LF EMK ++IVSWN ML+G A +R
Sbjct: 229 AAEILFKEMKYKDIVSWNAMLDGLALN-------------------------------QR 257
Query: 268 LSEALTMYRAM-LCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQA 326
+ EA + M L + P+ V +V +I C M EG +H + ++ +
Sbjct: 258 IWEAFDLLHEMQLLGCVQPDSVTVVIIIPLCAELMLLREGRAVHGLTLRREMGLDFSVTN 317
Query: 327 TIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYS 386
++I Y+ C + A F+ + + SWNA+I+G+ +NG +A+ LF
Sbjct: 318 SLIDMYSKCKDVKRAEHVFKAIPERDLVSWNAMISGYSQNGHSREAQHLFRQ-------- 369
Query: 387 WSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVL 446
++ Y+Q T++++ + SS L+ G H + L
Sbjct: 370 ---LLQSYSQCSLS--------------------TLLAILPSCDSSEFLQFGESIHCWQL 406
Query: 447 NNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLT 506
N +++ MY CG + F + + + WN ++ G +G
Sbjct: 407 KLGFANNPLAVNSLMLMYINCGDLVACFSLLQTV-SAAADIVCWNTVMAGCTQNGHFWEA 465
Query: 507 LKIYSDLEK-RNIKLNSITFIGVLSTCCHAGLVDL-GERYFKSMKSVYNVEPDLKHYGCM 564
LK ++ + + ++ +S+ V+S C + L+ G + ++K++ +E D++ +
Sbjct: 466 LKAFNLMRQDPDVCHDSVALFNVISACGNLELLFAGGSLHGLALKTL--MESDIRVQNAL 523
Query: 565 VDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAA 599
+ + GR G++E+A +I ++ W +++A
Sbjct: 524 ITMYGRCGEIENA-RIIFGFSCNRNLCSWNCMISA 557
Score = 139 bits (349), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 130/557 (23%), Positives = 240/557 (43%), Gaps = 75/557 (13%)
Query: 95 MISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPN 154
+++ Y R + + +FD+ + + + +MI +N C+ A+ +F ++ GV +
Sbjct: 13 LLTAYSRAADFSSSWALFDEILYRDVILWNAMITASVENQCFGVAVNLFVELMGEGVGLD 72
Query: 155 EVTLASVISSSVHLGGIWECRMLHGLVIK--LMIDGFVIISTNLLNMYCVCSSLVEARSL 212
TL V+S+S H+G + + R+LHG+ K L+ D F + L++MY C L + +
Sbjct: 73 STTLLIVVSASSHMGNLTQGRVLHGISFKTGLLSDSF--LCNALIDMYAKCGELSSSECV 130
Query: 213 FDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEAL 272
F M+ R+I+SWN M+ G A + P K +L
Sbjct: 131 FGGMEYRDIISWNSMMRGCA-----------YNNYPKK--------------------SL 159
Query: 273 TMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFD--CYDFIQATIIH 330
++ M ++V + +SA G IH +K G+ ++ + ++I
Sbjct: 160 WYFKKMAYSSEQADNVSLTCAVSASALLGELSFGQVIHGWGIKLGYKDISHNSFENSLIS 219
Query: 331 FYAACGRINLARLQF-ELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSA 389
Y+ C I A + F E+ KD I SWNA++ G N I +A L + MQ
Sbjct: 220 LYSQCRDIQAAEILFKEMKYKD-IVSWNAMLDGLALNQRIWEAFDLLHEMQ--------- 269
Query: 390 MISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNS 449
+ V+P+ +T+V + A L+EGR H L
Sbjct: 270 ---------------------LLGCVQPDSVTVVIIIPLCAELMLLREGRAVHGLTLRRE 308
Query: 450 ITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKI 509
+ L+ +++ ++IDMY+KC + A VF I +R + WNA+I G + +G + +
Sbjct: 309 MGLDFSVTNSLIDMYSKCKDVKRAEHVFKAIPER--DLVSWNAMISGYSQNGHSREAQHL 366
Query: 510 YSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGER-YFKSMKSVYNVEPDLKHYGCMVDLL 568
+ L + + + T + +L +C + + GE + +K + P ++ +
Sbjct: 367 FRQLLQSYSQCSLSTLLAILPSCDSSEFLQFGESIHCWQLKLGFANNP--LAVNSLMLMY 424
Query: 569 GRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRV 628
G L +++++ AD+V W T++A +G+ +A +L P V
Sbjct: 425 INCGDLVACFSLLQTVSAAADIVCWNTVMAGCTQNGHFWEALKAF-NLMRQDPDVCHDSV 483
Query: 629 LLSNIYADAGRWEDAFS 645
L N+ + G E F+
Sbjct: 484 ALFNVISACGNLELLFA 500
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 97/430 (22%), Positives = 175/430 (40%), Gaps = 74/430 (17%)
Query: 5 HFHSVFNSQKANLQNSDY---ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQ 61
HF + Q+ D +AL + + C + G +H L K+ +ES+ +Q
Sbjct: 461 HFWEALKAFNLMRQDPDVCHDSVALFNVISACGNLELLFAGGSLHGLALKTLMESDIRVQ 520
Query: 62 NSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCV 121
N+LI +Y +CG I A+ +F +CN RN
Sbjct: 521 NALITMYGRCGEIENARIIFG-------FSCN-------RN-----------------LC 549
Query: 122 SYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLV 181
S+ MI F+QN R ALE+F + PNE+T+ ++S+ LG + + +HG V
Sbjct: 550 SWNCMISAFSQNKDGRRALELFCHIEFE---PNEITIVGILSACTQLGVLRHGKQIHGHV 606
Query: 182 IKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELAR 241
I+ + G +S L +MY C L A +F ER++ +WN M++ F
Sbjct: 607 IRSRLQGNSFVSAALEDMYSNCGRLDTAFQIFQSSPERSVAAWNSMISAF---------- 656
Query: 242 ELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAM 301
G +G +A+ ++ M G P + L+SAC +
Sbjct: 657 --------------GFHSNG-------GKAIELFHEMRECGTRPTKSTFISLLSACSHSG 695
Query: 302 AFGEGLQIHSIIVKA-GFDCYDFIQATIIHFYAACGRINLA-RLQFELGIKDHIASWNAL 359
EGL +S +++ + ++ GR+ A ++ + W AL
Sbjct: 696 LVNEGLWYYSNMLELFNVEADTEHHVCMVDMLGRAGRLGEAYEFIRQMPTQPEPGVWGAL 755
Query: 360 IAGFIRNGMIEDAR---QLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGV- 415
++ +G ++ R +L ++ +V + ++ + Y + A+EL + D G+
Sbjct: 756 LSACSYHGDLKMGREVAELLFELEPENVGYYISLSNMYVAAGRWKDAVELRRIIQDKGLK 815
Query: 416 KPNEITMVSV 425
KP +++ V
Sbjct: 816 KPAAYSLIDV 825
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 121/257 (47%), Gaps = 14/257 (5%)
Query: 347 LGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALEL 406
+G H+ + +L+ + R + LF+ + RDV W+AMI+ +N+ +A+ L
Sbjct: 1 MGALAHLPTSTSLLTAYSRAADFSSSWALFDEILYRDVILWNAMITASVENQCFGVAVNL 60
Query: 407 FHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAK 466
F ++ GV + T++ V A + G L +GR H + + L A+IDMYAK
Sbjct: 61 FVELMGEGVGLDSTTLLIVVSASSHMGNLTQGRVLHGISFKTGLLSDSFLCNALIDMYAK 120
Query: 467 CGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFI 526
CG ++++ VF + R + WN+++ G A + +L + + + + ++++
Sbjct: 121 CGELSSSECVFGGMEYR--DIISWNSMMRGCAYNNYPKKSLWYFKKMAYSSEQADNVSL- 177
Query: 527 GVLSTCCHAGLVDLGERYFKSMKSVYNVE---PDLKH---YGCMVDLLGRAGQLEDAEEV 580
TC + LGE F + + ++ D+ H ++ L + ++ AE +
Sbjct: 178 ----TCAVSASALLGELSFGQVIHGWGIKLGYKDISHNSFENSLISLYSQCRDIQAAEIL 233
Query: 581 IRSMPMKADVVIWGTLL 597
+ M K D+V W +L
Sbjct: 234 FKEMKYK-DIVSWNAML 249
>gi|225460338|ref|XP_002280412.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g13880-like [Vitis vinifera]
Length = 802
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 211/677 (31%), Positives = 316/677 (46%), Gaps = 116/677 (17%)
Query: 1 TPLDHFHSVFNSQKANLQNSDYEL---ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESN 57
T + +H V N K + SD L +AL C + + G+ IH+LI SGL
Sbjct: 96 TQMGFYHEVMNLFK-EARMSDLRLDKFTFSNALSVCGRTLDLRLGRLIHALITVSGLGGP 154
Query: 58 TFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPI 117
+ NSLI++Y KCG I A+ +F+S LD
Sbjct: 155 VLLTNSLIDMYCKCGRIDWARLVFESADELDS---------------------------- 186
Query: 118 KCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVI-------SSSVHLGG 170
VS+ S+I G+ + E L + M G+ N L S + SSS+ G
Sbjct: 187 ---VSWNSLIAGYVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECG- 242
Query: 171 IWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNG 230
+MLHG +KL +D V++ T LL+ Y
Sbjct: 243 ----KMLHGCAVKLGLDLDVVVGTALLDTY------------------------------ 268
Query: 231 FAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLS-----EALTMYRAMLCDGIAP 285
AK G +E A ++F+ +P +VV + MI G+LQ+E ++ EA+ ++ M G+ P
Sbjct: 269 -AKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFFEMQSRGMKP 327
Query: 286 NDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQF 345
++ ++ AC AF G QIH+ I K +FI
Sbjct: 328 SEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIG-------------------- 367
Query: 346 ELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALE 405
NAL+ + +G IED + F++ K DV SW+++I G+ QN Q L
Sbjct: 368 -----------NALVELYSLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLT 416
Query: 406 LFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYA 465
LFH ++ +G KP+E T+ + A A+ +K G H Y + I + + I MYA
Sbjct: 417 LFHELLFSGRKPDEFTISIMLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYA 476
Query: 466 KCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITF 525
KCG I++A F ++ + W+ +I A HG A + ++ ++ I N ITF
Sbjct: 477 KCGDIDSANMTFKETKN--PDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITF 534
Query: 526 IGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMP 585
+GVL C H GLV+ G RYF+ MK + + P++KH C+VDLLGRAG+L +AE I
Sbjct: 535 LGVLVACSHGGLVEEGLRYFEIMKKDHGITPNVKHSACIVDLLGRAGRLAEAESFIMDSG 594
Query: 586 MKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFS 645
+ D V+W +LL+A R+H + G+R A+ + L+P S VLL NIY DAG A
Sbjct: 595 FEGDPVMWRSLLSACRVHKATDTGKRVAERVIELEPEAAASYVLLYNIYNDAGIQMPATE 654
Query: 646 IRKEMRDCGMKRLPGFS 662
IR M+D G+K+ PG S
Sbjct: 655 IRNLMKDRGVKKEPGLS 671
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 121/492 (24%), Positives = 212/492 (43%), Gaps = 75/492 (15%)
Query: 149 LGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVE 208
LG+ + VT ++ S G + ++ H +IK + + NLL MYC C
Sbjct: 13 LGLPLDSVTYTKLVQCSTRTGSLIHGKLAHMHMIKTCFKPCLFLLNNLLYMYCKC----- 67
Query: 209 ARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERL 268
G ++A++LF+R+P ++VVSW ++I GY Q+
Sbjct: 68 --------------------------GETDVAKKLFDRMPKRNVVSWNSLISGYTQMGFY 101
Query: 269 SEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATI 328
E + +++ + + + +S CGR + G IH++I +G + ++
Sbjct: 102 HEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLGRLIHALITVSGLGGPVLLTNSL 161
Query: 329 IHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWS 388
I Y CGRI+ ARL FE + SWN+LIAG++R G
Sbjct: 162 IDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRIG--------------------- 200
Query: 389 AMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIAS--SGTLKEGRWAHEYVL 446
N++ L L M+ G+ N + S A S S +++ G+ H +
Sbjct: 201 -------SNDE---MLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAV 250
Query: 447 NNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICG---LAMHGD- 502
+ L+ + A++D YAK G + A ++F + D +V +NA+I G + D
Sbjct: 251 KLGLDLDVVVGTALLDTYAKIGDLEDATKIFKLMPD--PNVVMYNAMIAGFLQMETMADE 308
Query: 503 -ANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHY 561
AN + ++ +++ R +K + TF +L C + G++ + YN++ D
Sbjct: 309 FANEAMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFK-YNLQSDEFIG 367
Query: 562 GCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSL--AGL 619
+V+L +G +ED + S P K DVV W +L+ +G E G L +G
Sbjct: 368 NALVELYSLSGSIEDGLKCFHSTP-KLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGR 426
Query: 620 QPSHGPSRVLLS 631
+P ++LS
Sbjct: 427 KPDEFTISIMLS 438
>gi|347954502|gb|AEP33751.1| chloroplast biogenesis 19, partial [Lepidium virginicum]
Length = 485
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 156/420 (37%), Positives = 243/420 (57%), Gaps = 6/420 (1%)
Query: 249 SKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQ 308
S+ +VSW + I + RL+EA+ + M GI PN + + L+SACG + EGL
Sbjct: 18 SETIVSWTSRITLLSRDGRLAEAVREFSDMRLAGIEPNHITFIALLSACGNFPSGSEGLG 77
Query: 309 --IHSIIVKAGFD-CYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIR 365
+H K G + + + I+ Y+ G + ARL F+ + +WN +I G++R
Sbjct: 78 YLLHGYACKLGLERSHVMVGTAILGMYSKSGHLRKARLVFDYIEDKNSVTWNTMIDGYMR 137
Query: 366 NGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSV 425
NG +++A +F+ M RD+ SW+AMI+G+ + AL F M +GV P+ + ++S
Sbjct: 138 NGQVDNAVDVFDKMPDRDLISWTAMITGFVKKGFHEEALAWFREMQISGVNPDYVAIISA 197
Query: 426 FCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTT 485
A + G L G W H YVL+ N +S ++ID+Y +CG + A +VF + RT
Sbjct: 198 VAACTNLGALSFGLWVHRYVLSQDFRNNVRVSNSLIDLYCRCGCVEFARQVFDKMEKRT- 256
Query: 486 SVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYF 545
V WN++I G A +G+AN +L + +++ + +TF G L+ C H GLV+ G +YF
Sbjct: 257 -VVSWNSVIVGFAANGNANESLVYFRKMQREGFTPDGVTFTGALTACSHVGLVEEGFQYF 315
Query: 546 KSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGN 605
+ MK Y + P ++HYGC+VDL RAG+LEDA V+ SMPMK + V+ G+LLAA R HGN
Sbjct: 316 QMMKHDYRISPRIEHYGCLVDLYSRAGRLEDAFIVVESMPMKPNEVVIGSLLAACRNHGN 375
Query: 606 VEV-GERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
+ ER K + L + V+LSN+YA G+WE A +R++M+ G+K+ PG+S +
Sbjct: 376 HTILAERLMKYITDLDVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGYSSI 435
Score = 162 bits (411), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 102/384 (26%), Positives = 184/384 (47%), Gaps = 43/384 (11%)
Query: 101 RNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLAS 160
R + N + +++ + VS+TS I +++ EA+ F DMR+ G+ PN +T +
Sbjct: 2 RKNHANPKIQKLNQSTSETIVSWTSRITLLSRDGRLAEAVREFSDMRLAGIEPNHITFIA 61
Query: 161 VISSSVHL--GGIWECRMLHGLVIKLMID-GFVIISTNLLNMYCVCSSLVEARSLFDEMK 217
++S+ + G +LHG KL ++ V++ T +L MY L +AR +FD ++
Sbjct: 62 LLSACGNFPSGSEGLGYLLHGYACKLGLERSHVMVGTAILGMYSKSGHLRKARLVFDYIE 121
Query: 218 ERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRA 277
++N V+WN M++G+ + G V+ A ++F+++P +D++SW MI G+++ EAL +R
Sbjct: 122 DKNSVTWNTMIDGYMRNGQVDNAVDVFDKMPDRDLISWTAMITGFVKKGFHEEALAWFRE 181
Query: 278 MLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGR 337
M G+ P+ V I+ ++AC A GL +H ++ F + ++I Y CG
Sbjct: 182 MQISGVNPDYVAIISAVAACTNLGALSFGLWVHRYVLSQDFRNNVRVSNSLIDLYCRCGC 241
Query: 338 INLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQN 397
+ AR F+ K + SWN++I GF NG ++ F MQ+
Sbjct: 242 VEFARQVFDKMEKRTVVSWNSVIVGFAANGNANESLVYFRKMQRE--------------- 286
Query: 398 EQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG-----RWAHEYVLNNSITL 452
G P+ +T A + G ++EG H+Y ++ I
Sbjct: 287 ----------------GFTPDGVTFTGALTACSHVGLVEEGFQYFQMMKHDYRISPRI-- 328
Query: 453 NDNLSAAIIDMYAKCGSINTAFEV 476
++D+Y++ G + AF V
Sbjct: 329 --EHYGCLVDLYSRAGRLEDAFIV 350
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 88/297 (29%), Positives = 152/297 (51%), Gaps = 44/297 (14%)
Query: 42 GQQIHSLIFKSGLE-SNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYI 100
G +H K GLE S+ + +++ +Y+K G + +A+ +FD + V N MI GY+
Sbjct: 77 GYLLHGYACKLGLERSHVMVGTAILGMYSKSGHLRKARLVFDYIEDKNSVTWNTMIDGYM 136
Query: 101 RNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLAS 160
RN ++++A +VFDK P + +S+T+MI GF + EAL FR+M+I GV P+ V + S
Sbjct: 137 RNGQVDNAVDVFDKMPDRDLISWTAMITGFVKKGFHEEALAWFREMQISGVNPDYVAIIS 196
Query: 161 VISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERN 220
+++ +LG + +H V+ V +S +L+++YC C + AR +FD+M++R
Sbjct: 197 AVAACTNLGALSFGLWVHRYVLSQDFRNNVRVSNSLIDLYCRCGCVEFARQVFDKMEKRT 256
Query: 221 IVSWNVMLNGFA-----------------------------------KAGLVELARELFE 245
+VSWN ++ GFA GLVE + F+
Sbjct: 257 VVSWNSVIVGFAANGNANESLVYFRKMQREGFTPDGVTFTGALTACSHVGLVEEGFQYFQ 316
Query: 246 RIP-----SKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISAC 297
+ S + +G ++D Y + RL +A + +M + PN+V+I L++AC
Sbjct: 317 MMKHDYRISPRIEHYGCLVDLYSRAGRLEDAFIVVESM---PMKPNEVVIGSLLAAC 370
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 71/155 (45%), Gaps = 32/155 (20%)
Query: 19 NSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAK 78
N DY +A++SA+ C+ A+S G +H + +N + NSLI+LY +CG + A+
Sbjct: 188 NPDY-VAIISAVAACTNLGALSFGLWVHRYVLSQDFRNNVRVSNSLIDLYCRCGCVEFAR 246
Query: 79 SMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWRE 138
+FD K + VS+ S+I+GFA N E
Sbjct: 247 QVFD-------------------------------KMEKRTVVSWNSVIVGFAANGNANE 275
Query: 139 ALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWE 173
+L FR M+ G P+ VT +++ H+G + E
Sbjct: 276 SLVYFRKMQREGFTPDGVTFTGALTACSHVGLVEE 310
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 110/274 (40%), Gaps = 54/274 (19%)
Query: 374 QLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCA----- 428
Q N + SW++ I+ +++ + A+ F M AG++PN IT +++ A
Sbjct: 11 QKLNQSTSETIVSWTSRITLLSRDGRLAEAVREFSDMRLAGIEPNHITFIALLSACGNFP 70
Query: 429 ---------------------------------IASSGTLKEGRWAHEYVLN-NSITLND 454
+ SG L++ R +Y+ + NS+T N
Sbjct: 71 SGSEGLGYLLHGYACKLGLERSHVMVGTAILGMYSKSGHLRKARLVFDYIEDKNSVTWN- 129
Query: 455 NLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLE 514
+ID Y + G ++ A +VF + DR + W A+I G G L + +++
Sbjct: 130 ----TMIDGYMRNGQVDNAVDVFDKMPDR--DLISWTAMITGFVKKGFHEEALAWFREMQ 183
Query: 515 KRNIKLNSITFIGVLSTCCHAGLVDLG---ERYFKSMKSVYNVEPDLKHYGCMVDLLGRA 571
+ + + I ++ C + G + G RY S NV ++DL R
Sbjct: 184 ISGVNPDYVAIISAVAACTNLGALSFGLWVHRYVLSQDFRNNVRVS----NSLIDLYCRC 239
Query: 572 GQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGN 605
G +E A +V M K VV W +++ +GN
Sbjct: 240 GCVEFARQVFDKME-KRTVVSWNSVIVGFAANGN 272
>gi|359488917|ref|XP_002283393.2| PREDICTED: ATP-dependent zinc metalloprotease FTSH 6,
chloroplastic-like [Vitis vinifera]
Length = 1146
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 174/503 (34%), Positives = 268/503 (53%), Gaps = 47/503 (9%)
Query: 171 IWECRMLHGLVIKLMIDGFVIISTNLLN--------MYCVCSSLVEARSLFDEMKERNIV 222
+ E L G + ++ F IS++ +N + +CSS+ + LF I
Sbjct: 639 LLEKETLTGDEFRAILSEFTDISSDKMNVKPQQCLSLLNLCSSM---KHLFQIRGHGFIA 695
Query: 223 SWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDG 282
+ + G + AR L +V SW +I Y + EA+ Y M G
Sbjct: 696 GPLLRFCASSPLGNLNHARVLLSGSEKSEVSSWNDLIRSYATRDSPREAIGAYLEMRSLG 755
Query: 283 IAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLAR 342
I+P+ + L+ AC AF EG +I ++K G DC ++Q T+IHFY +C RI
Sbjct: 756 ISPDKLTFPILLKACAAISAFNEGRKIQVDVMKHGLDCNVYVQNTMIHFYGSCKRI---- 811
Query: 343 LQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNM 402
DAR++F+ M R V SW+A++S NE N
Sbjct: 812 ---------------------------RDARRMFDEMSYRTVVSWNAVLSACVDNEWLND 844
Query: 403 ALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIID 462
+ LF M +G P+E TMV + A + G L GRW H V+ + +N L A++D
Sbjct: 845 SFGLFVKMRGSGFDPDETTMVILLSACSELGNLSFGRWVHSQVIEKGMVVNCRLGTALVD 904
Query: 463 MYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNS 522
MYAKCG++ A VF+ + +R +V W+A+I GLA HG A L+++ +++ +I N
Sbjct: 905 MYAKCGAVCEASLVFHRMLER--NVWTWSAMILGLAQHGFAKEALELFPKMKQSSISPNY 962
Query: 523 ITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIR 582
+TF+GVL C HAGLVD G R+F M+ V+ +EP + HYG MVD+L RAG+L++A I
Sbjct: 963 VTFLGVLCACSHAGLVDDGYRFFHDMEYVHGIEPMMIHYGAMVDILSRAGRLKEAYNFIL 1022
Query: 583 SMPMKADVVIWGTLLAASRIHG---NVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGR 639
+MP++AD V+W TLL+A IHG N VG++ K L L+P + V+++N+YA+ G+
Sbjct: 1023 NMPVEADPVVWRTLLSACTIHGINDNDGVGDKVRKRLLELEPRRSGNFVMVANMYAEVGK 1082
Query: 640 WEDAFSIRKEMRDCGMKRLPGFS 662
W+ A ++R+ M+D G+K++ G S
Sbjct: 1083 WDKAANVRRTMKDTGLKKMAGES 1105
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 100/449 (22%), Positives = 189/449 (42%), Gaps = 68/449 (15%)
Query: 105 LNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISS 164
LN AR + + S+ +I +A D REA+ + +MR LG+ P+++T ++ +
Sbjct: 710 LNHARVLLSGSEKSEVSSWNDLIRSYATRDSPREAIGAYLEMRSLGISPDKLTFPILLKA 769
Query: 165 SVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSW 224
+ E R + V+K +D V + +++ Y C + +AR +FDEM R +VSW
Sbjct: 770 CAAISAFNEGRKIQVDVMKHGLDCNVYVQNTMIHFYGSCKRIRDARRMFDEMSYRTVVSW 829
Query: 225 NVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIA 284
N +L+ +D E L+++ ++ M G
Sbjct: 830 NAVLS---------------------------ACVDN----EWLNDSFGLFVKMRGSGFD 858
Query: 285 PNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQ 344
P++ +V L+SAC G +HS +++ G + ++ YA CG + A L
Sbjct: 859 PDETTMVILLSACSELGNLSFGRWVHSQVIEKGMVVNCRLGTALVDMYAKCGAVCEASLV 918
Query: 345 FELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMAL 404
F ++ ++ +W+A+I G ++G ++ AL
Sbjct: 919 FHRMLERNVWTWSAMILGLAQHGFAKE-------------------------------AL 947
Query: 405 ELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG-RWAHEYVLNNSITLNDNLSAAIIDM 463
ELF M + + PN +T + V CA + +G + +G R+ H+ + I A++D+
Sbjct: 948 ELFPKMKQSSISPNYVTFLGVLCACSHAGLVDDGYRFFHDMEYVHGIEPMMIHYGAMVDI 1007
Query: 464 YAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLN-- 521
++ G + A+ ++ V W ++ +HG N + + KR ++L
Sbjct: 1008 LSRAGRLKEAYNFILNMPVEADPVV-WRTLLSACTIHG-INDNDGVGDKVRKRLLELEPR 1065
Query: 522 -SITFIGVLSTCCHAGLVDLGERYFKSMK 549
S F+ V + G D ++MK
Sbjct: 1066 RSGNFVMVANMYAEVGKWDKAANVRRTMK 1094
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/398 (21%), Positives = 166/398 (41%), Gaps = 76/398 (19%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
L+ C+A A ++G++I + K GL+ N ++QN++I+ Y C
Sbjct: 767 LKACAAISAFNEGRKIQVDVMKHGLDCNVYVQNTMIHFYGSC------------------ 808
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
R+ DAR +FD+ + VS+ +++ N+ ++ +F MR
Sbjct: 809 -------------KRIRDARRMFDEMSYRTVVSWNAVLSACVDNEWLNDSFGLFVKMRGS 855
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVI---ISTNLLNMYCVCSSL 206
G P+E T+ ++S+ LG + R +H VI+ G V+ + T L++MY C ++
Sbjct: 856 GFDPDETTMVILLSACSELGNLSFGRWVHSQVIE---KGMVVNCRLGTALVDMYAKCGAV 912
Query: 207 VEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVE 266
EA +F M ERN+ +W+ M+ G A+ G + A ELF +
Sbjct: 913 CEASLVFHRMLERNVWTWSAMILGLAQHGFAKEALELFPK-------------------- 952
Query: 267 RLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQ-IHSIIVKAGFDCYDFIQ 325
M I+PN V + ++ AC A +G + H + G +
Sbjct: 953 -----------MKQSSISPNYVTFLGVLCACSHAGLVDDGYRFFHDMEYVHGIEPMMIHY 1001
Query: 326 ATIIHFYAACGRINLA-RLQFELGIKDHIASWNALIAGFI------RNGMIEDARQLFNN 378
++ + GR+ A + ++ W L++ +G+ + R+
Sbjct: 1002 GAMVDILSRAGRLKEAYNFILNMPVEADPVVWRTLLSACTIHGINDNDGVGDKVRKRLLE 1061
Query: 379 MQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVK 416
++ R ++ + + YA+ + + A + M D G+K
Sbjct: 1062 LEPRRSGNFVMVANMYAEVGKWDKAANVRRTMKDTGLK 1099
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 95/209 (45%), Gaps = 33/209 (15%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E +V L CS +S G+ +HS + + G+ N + +L+++YAKCG + +A +F
Sbjct: 861 ETTMVILLSACSELGNLSFGRWVHSQVIEKGMVVNCRLGTALVDMYAKCGAVCEASLVF- 919
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+ M+ R V+ ++++MI+G AQ+ +EALE+
Sbjct: 920 ----------HRMLE-----------RNVW---------TWSAMILGLAQHGFAKEALEL 949
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWEC-RMLHGLVIKLMIDGFVIISTNLLNMYC 201
F M+ + PN VT V+ + H G + + R H + I+ +I ++++
Sbjct: 950 FPKMKQSSISPNYVTFLGVLCACSHAGLVDDGYRFFHDMEYVHGIEPMMIHYGAMVDILS 1009
Query: 202 VCSSLVEARSLFDEMK-ERNIVSWNVMLN 229
L EA + M E + V W +L+
Sbjct: 1010 RAGRLKEAYNFILNMPVEADPVVWRTLLS 1038
>gi|302767396|ref|XP_002967118.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
gi|300165109|gb|EFJ31717.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
Length = 903
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 203/648 (31%), Positives = 313/648 (48%), Gaps = 112/648 (17%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+ LV L C+ + Q + IHS++ +SGLE + +L + YA+ G
Sbjct: 229 ITLVITLSVCAK---IRQARAIHSIVRESGLEQTLVVSTALASAYARLG----------- 274
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
L+ A+EVFD+ + VS+ +M+ +AQ+ EA +F
Sbjct: 275 --------------------HLDQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLF 314
Query: 144 RDMRILGVIPNEVTL--ASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYC 201
M G+ P++VTL AS SS+ G RM+H ++ +D
Sbjct: 315 ARMLHEGIPPSKVTLVNASTGCSSLRFG-----RMIHACALEKGLD-------------- 355
Query: 202 VCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDG 261
R+IV N +L+ + + G E AR LFE IP + VSW TMI G
Sbjct: 356 -----------------RDIVLGNALLDMYTRCGSPEEARHLFEGIPG-NAVSWNTMIAG 397
Query: 262 YLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACG----RAMAFGEGLQIHSIIVKAG 317
Q ++ AL +++ M +G+AP ++L+ A A A EG ++HS IV G
Sbjct: 398 SSQKGQMKRALELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAMAEGRKLHSRIVSCG 457
Query: 318 FDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFN 377
+ I ++ YA+CG I+ A F+ G +ED
Sbjct: 458 YASEPAIGTAVVKMYASCGAIDEAAASFQ-------------------RGAMED------ 492
Query: 378 NMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKE 437
+ DV SW+A+IS +Q+ AL F M GV PN+IT V+V A A + L E
Sbjct: 493 ---RHDVVSWNAIISSLSQHGHGKRALGFFRRMDLHGVAPNQITCVAVLDACAGAAALTE 549
Query: 438 GRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHI---RDRTTSVSPWNAII 494
G H+++ ++ + N ++ A+ MY +CGS+ +A E+F + RD V +NA+I
Sbjct: 550 GVIVHDHLRHSGMESNVFVATALASMYGRCGSLESAREIFEKVAVERD----VVIFNAMI 605
Query: 495 CGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNV 554
+ +G A LK++ +++ + + +F+ VLS C H GL D G F+SM+ Y +
Sbjct: 606 AAYSQNGLAGEALKLFWRMQQEGSRPDEQSFVSVLSACSHGGLADEGWEIFRSMRQSYGI 665
Query: 555 EPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAK 614
P HY C VD+LGRAG L DAEE+IR M +K V++W TLL A R + +V+ G A
Sbjct: 666 APSEDHYACAVDVLGRAGWLADAEELIRCMDVKPTVLVWKTLLGACRKYRDVDRGRLANS 725
Query: 615 SLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
+ L P + V+LSNI A AG+W++A +R EM G+++ G S
Sbjct: 726 MVRELDPGDESAYVVLSNILAGAGKWDEAAEVRTEMESRGLRKQAGKS 773
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 150/646 (23%), Positives = 266/646 (41%), Gaps = 142/646 (21%)
Query: 26 LVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCS 85
LV LR +SQG++IH+ I GLE + N L+ LY KC
Sbjct: 32 LVRLLRAAGDDRLLSQGRRIHARIVSLGLEEE--LGNHLLRLYLKC-------------- 75
Query: 86 TLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRD 145
+ L D EVF + ++ S+T++I + ++ + A+ +F
Sbjct: 76 -----------------ESLGDVEEVFSRLEVRDEASWTTIITAYTEHGQAKRAIWMFHR 118
Query: 146 MRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSS 205
M+ GV + VT +V+ + LG + + R +H +++ ++G +++ LL++Y C
Sbjct: 119 MQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHAWIVESGLEGKSVLANLLLHIYGSCGC 178
Query: 206 LVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQV 265
+ A LF+ M ER++VSWN + A++G +++A ELF+R
Sbjct: 179 VASAMLLFERM-ERDLVSWNAAIAANAQSGDLDMALELFQR------------------- 218
Query: 266 ERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQ 325
M +G+ P + +V +S C + + IHSI+ ++G + +
Sbjct: 219 ------------MQLEGVRPARITLVITLSVCAK---IRQARAIHSIVRESGLEQTLVVS 263
Query: 326 ATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQK---- 381
+ YA G ++ A+ F+ + + SWNA++ + ++G + +A LF M
Sbjct: 264 TALASAYARLGHLDQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGIP 323
Query: 382 --------------------------------RDVYSWSAMISGYAQNEQPNMALELFHG 409
RD+ +A++ Y + P A LF G
Sbjct: 324 PSKVTLVNASTGCSSLRFGRMIHACALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFEG 383
Query: 410 ------------------------------MVDAGVKPNEITMVSVFCAIAS----SGTL 435
M G+ P T +++ A+AS + +
Sbjct: 384 IPGNAVSWNTMIAGSSQKGQMKRALELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAM 443
Query: 436 KEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYH--IRDRTTSVSPWNAI 493
EGR H +++ + A++ MYA CG+I+ A F + DR VS WNAI
Sbjct: 444 AEGRKLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVS-WNAI 502
Query: 494 ICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYN 553
I L+ HG L + ++ + N IT + VL C A + G ++
Sbjct: 503 ISSLSQHGHGKRALGFFRRMDLHGVAPNQITCVAVLDACAGAAALTEGVIVHDHLRH-SG 561
Query: 554 VEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAA 599
+E ++ + + GR G LE A E+ + ++ DVVI+ ++AA
Sbjct: 562 MESNVFVATALASMYGRCGSLESAREIFEKVAVERDVVIFNAMIAA 607
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 98/410 (23%), Positives = 182/410 (44%), Gaps = 79/410 (19%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
++ LV+A CS+ + G+ IH+ + GL+ + + N+L+++Y +CG +A+ +F+
Sbjct: 326 KVTLVNASTGCSS---LRFGRMIHACALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFE 382
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+ V+ N MI+G +Q + ALE+
Sbjct: 383 GIPG-NAVSWNTMIAGS-------------------------------SQKGQMKRALEL 410
Query: 143 FRDMRILGVIPNEVT----LASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLN 198
F+ M++ G+ P T L +V S+ + E R LH ++ I T ++
Sbjct: 411 FQRMQLEGMAPVRATYLNLLEAVASNPEEARAMAEGRKLHSRIVSCGYASEPAIGTAVVK 470
Query: 199 MYCVCSSLVEARSLFDE--MKER-NIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSW 255
MY C ++ EA + F M++R ++VSWN +++ ++ G
Sbjct: 471 MYASCGAIDEAAASFQRGAMEDRHDVVSWNAIISSLSQHG-------------------- 510
Query: 256 GTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVK 315
AL +R M G+APN + V ++ AC A A EG+ +H +
Sbjct: 511 -----------HGKRALGFFRRMDLHGVAPNQITCVAVLDACAGAAALTEGVIVHDHLRH 559
Query: 316 AGFDCYDFIQATIIHFYAACGRINLARLQFE-LGIKDHIASWNALIAGFIRNGMIEDARQ 374
+G + F+ + Y CG + AR FE + ++ + +NA+IA + +NG+ +A +
Sbjct: 560 SGMESNVFVATALASMYGRCGSLESAREIFEKVAVERDVVIFNAMIAAYSQNGLAGEALK 619
Query: 375 LFNNMQKR----DVYSWSAMISGYAQNEQPNMALELFHGMVDA-GVKPNE 419
LF MQ+ D S+ +++S + + E+F M + G+ P+E
Sbjct: 620 LFWRMQQEGSRPDEQSFVSVLSACSHGGLADEGWEIFRSMRQSYGIAPSE 669
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/349 (24%), Positives = 149/349 (42%), Gaps = 43/349 (12%)
Query: 284 APNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARL 343
A +V L+ A G +G +IH+ IV G L
Sbjct: 26 ATRPAHLVRLLRAAGDDRLLSQGRRIHARIVSLG-------------------------L 60
Query: 344 QFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMA 403
+ ELG N L+ +++ + D ++F+ ++ RD SW+ +I+ Y ++ Q A
Sbjct: 61 EEELG--------NHLLRLYLKCESLGDVEEVFSRLEVRDEASWTTIITAYTEHGQAKRA 112
Query: 404 LELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDM 463
+ +FH M GV+ + +T ++V A A G L +GR H +++ + + L+ ++ +
Sbjct: 113 IWMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHAWIVESGLEGKSVLANLLLHI 172
Query: 464 YAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSI 523
Y CG + +A +F + S WNA I A GD ++ L+++ ++ ++ I
Sbjct: 173 YGSCGCVASAMLLFERMERDLVS---WNAAIAANAQSGDLDMALELFQRMQLEGVRPARI 229
Query: 524 TFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRS 583
T + LS C R S+ +E L + R G L+ A+EV
Sbjct: 230 TLVITLSVCAKIRQA----RAIHSIVRESGLEQTLVVSTALASAYARLGHLDQAKEVF-D 284
Query: 584 MPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSN 632
+ DVV W +L A HG+ + E A L PS+V L N
Sbjct: 285 RAAERDVVSWNAMLGAYAQHGH--MSEAALLFARMLHEGIPPSKVTLVN 331
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 112/242 (46%), Gaps = 21/242 (8%)
Query: 422 MVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIR 481
+V + A L +GR H ++ S+ L + L ++ +Y KC S+ EVF +
Sbjct: 32 LVRLLRAAGDDRLLSQGRRIHARIV--SLGLEEELGNHLLRLYLKCESLGDVEEVFSRLE 89
Query: 482 DRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLG 541
R + W II HG A + ++ +++ ++ +++TF+ VL C G + G
Sbjct: 90 VRDE--ASWTTIITAYTEHGQAKRAIWMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQG 147
Query: 542 ERYFKSMKSVYNVEPDLKHYGCMVDLL----GRAGQLEDAEEVIRSMPMKADVVIWGTLL 597
+S+ + + VE L+ + +LL G G + A ++ M+ D+V W +
Sbjct: 148 ----RSIHA-WIVESGLEGKSVLANLLLHIYGSCGCVASA--MLLFERMERDLVSWNAAI 200
Query: 598 AASRIHGNVEVGERAAK--SLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGM 655
AA+ G++++ + L G++ P+R+ L + + A +I +R+ G+
Sbjct: 201 AANAQSGDLDMALELFQRMQLEGVR----PARITLVITLSVCAKIRQARAIHSIVRESGL 256
Query: 656 KR 657
++
Sbjct: 257 EQ 258
>gi|449439619|ref|XP_004137583.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Cucumis sativus]
gi|449487109|ref|XP_004157499.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Cucumis sativus]
Length = 642
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 163/455 (35%), Positives = 250/455 (54%), Gaps = 34/455 (7%)
Query: 240 ARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIA-PNDVMIVDLISACG 298
AR LF I + DV + T+I G + S AL ++ M +A P+ L+ A
Sbjct: 58 ARRLFLDIRNPDVFMYNTLIRGLSDSDTPSNALQLFVEMRRKSVALPDSFSFAFLLKAAA 117
Query: 299 RAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFEL----------- 347
A GLQ+H + V G D + F+ T+I YA C + AR F+
Sbjct: 118 NCRALTNGLQLHCLAVGYGLDSHLFVGTTLISMYAECACLVFARKVFDEMIEPNIVAWNA 177
Query: 348 ---------GIKD-----------HIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSW 387
G+KD ++ SWN ++AG+ + G ++ AR++F M +D SW
Sbjct: 178 IVAACFRCEGVKDAEQVFRCMPIRNLTSWNIMLAGYTKAGELQLAREVFMKMPLKDDVSW 237
Query: 388 SAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLN 447
S MI G+A N N A F + G++PNE+++ V A A +G + GR H +V
Sbjct: 238 STMIVGFAHNGNFNDAFAFFREVRREGMRPNEVSLTGVLSACAQAGAFEFGRILHGFVEK 297
Query: 448 NSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTL 507
+ +++ A+ID Y+KCG+++ A VF ++ R S W A+I G+AMHG +
Sbjct: 298 SGFLQIISVNNALIDTYSKCGNLDMARLVFDNMLRR--SAVSWTAMIAGMAMHGYGEEAI 355
Query: 508 KIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDL 567
++++++E+ NIK +SITFI +L C HAGLVDLG YF M + Y +EP ++HYGCMVDL
Sbjct: 356 RLFNEMEESNIKPDSITFISILYACSHAGLVDLGCSYFSRMVNTYGIEPVIEHYGCMVDL 415
Query: 568 LGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSR 627
GRAG+L+ A + + MP+ + ++W TLL A IHGN+ + + + L+ L P +
Sbjct: 416 YGRAGKLQQAYDFVCQMPISPNDIVWRTLLGACSIHGNLYLAGQVKRQLSELDPENSGDH 475
Query: 628 VLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
VLLSNIYA AG+W+D ++R+ M +K+ PG+S
Sbjct: 476 VLLSNIYAVAGKWKDVAALRRSMTHQRLKKTPGWS 510
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 128/498 (25%), Positives = 228/498 (45%), Gaps = 87/498 (17%)
Query: 65 INLYAKCGLISQAKSM----FDSCSTLDPVACNIMI--SGYIRNDRLNDAREVFDKTPIK 118
+ L++KC + K + F +C P+ ++ D L+ AR +F
Sbjct: 9 LALFSKCKSLRTVKQIQALIFKTCLNSYPLVSGKLLLHCAVTLPDSLHYARRLFLDIRNP 68
Query: 119 CCVSYTSMIMGFAQNDCWREALEVFRDMRILGV-IPNEVTLASVISSSVHLGGIWECRML 177
Y ++I G + +D AL++F +MR V +P+ + A ++ ++ + + L
Sbjct: 69 DVFMYNTLIRGLSDSDTPSNALQLFVEMRRKSVALPDSFSFAFLLKAAANCRALTNGLQL 128
Query: 178 HGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKE------------------- 218
H L + +D + + T L++MY C+ LV AR +FDEM E
Sbjct: 129 HCLAVGYGLDSHLFVGTTLISMYAECACLVFARKVFDEMIEPNIVAWNAIVAACFRCEGV 188
Query: 219 ------------RNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVE 266
RN+ SWN+ML G+ KAG ++LARE+F ++P KD VSW TMI G+
Sbjct: 189 KDAEQVFRCMPIRNLTSWNIMLAGYTKAGELQLAREVFMKMPLKDDVSWSTMIVGFAHNG 248
Query: 267 RLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQA 326
++A +R + +G+ PN+V + ++SAC +A AF G +H + K+GF +
Sbjct: 249 NFNDAFAFFREVRREGMRPNEVSLTGVLSACAQAGAFEFGRILHGFVEKSGFLQIISVNN 308
Query: 327 TIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYS 386
+I Y+ CG +++ARL F+ ++ SW A+IAG +G E+A +LFN M+
Sbjct: 309 ALIDTYSKCGNLDMARLVFDNMLRRSAVSWTAMIAGMAMHGYGEEAIRLFNEME------ 362
Query: 387 WSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG-----RWA 441
++ +KP+ IT +S+ A + +G + G R
Sbjct: 363 -------------------------ESNIKPDSITFISILYACSHAGLVDLGCSYFSRMV 397
Query: 442 HEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSP----WNAIICGL 497
+ Y + I ++D+Y + G + A++ + +SP W ++
Sbjct: 398 NTYGIEPVI----EHYGCMVDLYGRAGKLQQAYDFVCQM-----PISPNDIVWRTLLGAC 448
Query: 498 AMHGDANLTLKIYSDLEK 515
++HG+ L ++ L +
Sbjct: 449 SIHGNLYLAGQVKRQLSE 466
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 104/336 (30%), Positives = 156/336 (46%), Gaps = 84/336 (25%)
Query: 38 AVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP-------- 89
A++ G Q+H L GL+S+ F+ +LI++YA+C + A+ +FD ++P
Sbjct: 121 ALTNGLQLHCLAVGYGLDSHLFVGTTLISMYAECACLVFARKVFD--EMIEPNIVAWNAI 178
Query: 90 -VAC------------------------NIMISGYIRNDRLNDAREVFDKTPIKCCVSYT 124
AC NIM++GY + L AREVF K P+K VS++
Sbjct: 179 VAACFRCEGVKDAEQVFRCMPIRNLTSWNIMLAGYTKAGELQLAREVFMKMPLKDDVSWS 238
Query: 125 SMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKL 184
+MI+GFA N + +A FR++R G+ PNEV+L V+S+ G R+LHG V K
Sbjct: 239 TMIVGFAHNGNFNDAFAFFREVRREGMRPNEVSLTGVLSACAQAGAFEFGRILHGFVEK- 297
Query: 185 MIDGFV-IISTN--LLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFA--------- 232
GF+ IIS N L++ Y C +L AR +FD M R+ VSW M+ G A
Sbjct: 298 --SGFLQIISVNNALIDTYSKCGNLDMARLVFDNMLRRSAVSWTAMIAGMAMHGYGEEAI 355
Query: 233 --------------------------KAGLVELARELFERIPSKD-----VVSWGTMIDG 261
AGLV+L F R+ + + +G M+D
Sbjct: 356 RLFNEMEESNIKPDSITFISILYACSHAGLVDLGCSYFSRMVNTYGIEPVIEHYGCMVDL 415
Query: 262 YLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISAC 297
Y + +L +A M I+PND++ L+ AC
Sbjct: 416 YGRAGKLQQAYDFVCQM---PISPNDIVWRTLLGAC 448
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 99/235 (42%), Gaps = 41/235 (17%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E++L L C+ A G+ +H + KSG + N+LI+ Y+KCG + A
Sbjct: 269 EVSLTGVLSACAQAGAFEFGRILHGFVEKSGFLQIISVNNALIDTYSKCGNLDMA----- 323
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
R VFD + VS+T+MI G A + EA+ +
Sbjct: 324 --------------------------RLVFDNMLRRSAVSWTAMIAGMAMHGYGEEAIRL 357
Query: 143 FRDMRILGVIPNEVTLASVISSSVH-----LGGIWECRMLHGLVIKLMIDGFVIISTNLL 197
F +M + P+ +T S++ + H LG + RM++ I+ +I+ + ++
Sbjct: 358 FNEMEESNIKPDSITFISILYACSHAGLVDLGCSYFSRMVNTYGIEPVIEHY----GCMV 413
Query: 198 NMYCVCSSLVEARSLFDEMK-ERNIVSWNVMLNGFAKAGLVELARELFERIPSKD 251
++Y L +A +M N + W +L + G + LA ++ ++ D
Sbjct: 414 DLYGRAGKLQQAYDFVCQMPISPNDIVWRTLLGACSIHGNLYLAGQVKRQLSELD 468
>gi|38567725|emb|CAE76014.1| B1358B12.23 [Oryza sativa Japonica Group]
Length = 918
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 208/677 (30%), Positives = 339/677 (50%), Gaps = 85/677 (12%)
Query: 38 AVSQGQQIHSLIFKSGL---ESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNI 94
A+ G +H+ + GL + + + +SL+ +YA+CG +
Sbjct: 122 ALPVGAAVHAYSVRFGLLEGDGSVAVASSLVYMYARCGSV-------------------- 161
Query: 95 MISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREAL----EVFRDMRILG 150
DA +FD+ P + V++T++I G N E L + R G
Sbjct: 162 -----------RDAVRLFDEMPERDVVAWTAVISGCVCNGQCGEGLSYLVRMVRSAGDGG 210
Query: 151 VIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEAR 210
PN T+ S + + LG + LHG +K + + ++L +MY C S +AR
Sbjct: 211 ARPNSRTMESGLEACGVLGELSVGTCLHGFGVKAGVGHCPSVVSSLFSMYTKCDSTEDAR 270
Query: 211 SLFDEMKERNIVSWNVMLNGFAKAGLVELARELF----ERIPSKDVVSWGTMIDGYLQVE 266
LF E+ E+++VSW ++ + +AG E A ELF E D V ++ G
Sbjct: 271 ILFPELPEKDLVSWTSLIGAYCRAGHAEKAVELFLGMEESGLQPDEVVISCLLAGLGNDA 330
Query: 267 RLSEALTMYRAML----CDGIAPNDVMI--------VDLISACGRAMAFGEGLQIHSIIV 314
++ T + A++ D + + +I VD+ + R + + S++V
Sbjct: 331 KVRGGKTFHAAIVRRNFGDSVLIGNALISMYAKCKQVDIAATVFRMLHQRDTDSWSSMVV 390
Query: 315 ---KAGFD--CYDFIQ-----------------ATIIHFYAACGRINLARLQFELGIKDH 352
KAG D C + + +II + GR+ L + IK H
Sbjct: 391 AYCKAGLDLKCLELYREMQFRDKDEFEYDTNSLISIISSCSRLGRLRLGQSAHCYSIK-H 449
Query: 353 IAS-----WNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELF 407
+A NALI+ + R G + AR++F ++ +DV +WSA+IS Y+ AL L+
Sbjct: 450 LAGENSSVANALISMYGRCGNFDVARKIFGMVKTKDVVTWSALISSYSHLGHSKDALLLY 509
Query: 408 HGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKC 467
M+ GVKPN T+VSV + A+ L+ G H +V + + + ++ A++DMY KC
Sbjct: 510 DQMLTEGVKPNSATLVSVISSCANLAALEHGELIHSHVKDVGLECDLSICTALVDMYMKC 569
Query: 468 GSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIG 527
G + A ++F + +R V WN +I G MHG+A LK++S +E+ N+K NS+TF+
Sbjct: 570 GQLGIARKMFDSMLER--DVVTWNVMISGYGMHGEAIQALKLFSMMERGNVKPNSLTFLA 627
Query: 528 VLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMK 587
+LS CCHAGLVD G F M+ Y++EP+LKHY CMVDLLG++G L++AE+V+ +MP++
Sbjct: 628 ILSACCHAGLVDKGRELFTRMEE-YSLEPNLKHYACMVDLLGKSGHLQEAEDVVSAMPIE 686
Query: 588 ADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIR 647
D IWGTLL A ++H N E+G R AK P + +L+SN Y A +W + +R
Sbjct: 687 PDGGIWGTLLGACKMHDNFEMGLRVAKKAFASDPENDGYYILMSNSYGSAEKWNEIEKLR 746
Query: 648 KEMRDCGMKRLPGFSGV 664
M++ G+++ G+S +
Sbjct: 747 DMMKNHGVEKSIGWSTI 763
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 109/472 (23%), Positives = 199/472 (42%), Gaps = 80/472 (16%)
Query: 140 LEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMI---DGFVIISTNL 196
L R MR G P+ T V S++ LG + +H ++ + DG V ++++L
Sbjct: 92 LSAHRRMRASGARPSRFTAPLVASAAAELGALPVGAAVHAYSVRFGLLEGDGSVAVASSL 151
Query: 197 LNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWG 256
+ MY A+ G V A LF+ +P +DVV+W
Sbjct: 152 VYMY-------------------------------ARCGSVRDAVRLFDEMPERDVVAWT 180
Query: 257 TMIDGYLQVERLSEALT----MYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSI 312
+I G + + E L+ M R+ G PN + + ACG G +H
Sbjct: 181 AVISGCVCNGQCGEGLSYLVRMVRSAGDGGARPNSRTMESGLEACGVLGELSVGTCLHGF 240
Query: 313 IVKAGFDCYDFIQATIIHFYAACGRINLARLQF-ELGIKDHIASWNALIAGFIRNGMIED 371
VKAG + +++ Y C AR+ F EL KD + SW +LI + R G E
Sbjct: 241 GVKAGVGHCPSVVSSLFSMYTKCDSTEDARILFPELPEKD-LVSWTSLIGAYCRAGHAEK 299
Query: 372 ARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIAS 431
A+ELF GM ++G++P+E+ + + + +
Sbjct: 300 -------------------------------AVELFLGMEESGLQPDEVVISCLLAGLGN 328
Query: 432 SGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWN 491
++ G+ H ++ + + + A+I MYAKC ++ A VF + R T W+
Sbjct: 329 DAKVRGGKTFHAAIVRRNFGDSVLIGNALISMYAKCKQVDIAATVFRMLHQRDT--DSWS 386
Query: 492 AIICGLAMHGDANLTLKIYSDLEKRN---IKLNSITFIGVLSTCCHAGLVDLGER-YFKS 547
+++ G L++Y +++ R+ + ++ + I ++S+C G + LG+ + S
Sbjct: 387 SMVVAYCKAGLDLKCLELYREMQFRDKDEFEYDTNSLISIISSCSRLGRLRLGQSAHCYS 446
Query: 548 MKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAA 599
+K + + + ++ + GR G + A ++ M DVV W L+++
Sbjct: 447 IKHLAGENSSVAN--ALISMYGRCGNFDVARKIF-GMVKTKDVVTWSALISS 495
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 149/340 (43%), Gaps = 61/340 (17%)
Query: 93 NIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVI 152
N +IS Y R + AR++F K V+++++I ++ ++AL ++ M GV
Sbjct: 459 NALISMYGRCGNFDVARKIFGMVKTKDVVTWSALISSYSHLGHSKDALLLYDQMLTEGVK 518
Query: 153 PNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSL 212
PN TL SVISS +L + ++H V + ++ + I T L++MY C L AR +
Sbjct: 519 PNSATLVSVISSCANLAALEHGELIHSHVKDVGLECDLSICTALVDMYMKCGQLGIARKM 578
Query: 213 FDEMKERNIVSWNVMLNGFA-----------------------------------KAGLV 237
FD M ER++V+WNVM++G+ AGLV
Sbjct: 579 FDSMLERDVVTWNVMISGYGMHGEAIQALKLFSMMERGNVKPNSLTFLAILSACCHAGLV 638
Query: 238 ELARELFERIP----SKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDL 293
+ RELF R+ ++ + M+D + L EA + AM I P+ + L
Sbjct: 639 DKGRELFTRMEEYSLEPNLKHYACMVDLLGKSGHLQEAEDVVSAM---PIEPDGGIWGTL 695
Query: 294 ISACGRAMAFGEGLQIHSIIVKAGF------DCYDFIQATIIHFYAACGRIN----LARL 343
+ AC F GL+ + K F D Y + + + Y + + N L +
Sbjct: 696 LGACKMHDNFEMGLR----VAKKAFASDPENDGYYILMS---NSYGSAEKWNEIEKLRDM 748
Query: 344 QFELGIKDHIASWNAL-IAGFIRNGMIEDARQLFNNMQKR 382
G++ I W+ + I GF++N + + LF + R
Sbjct: 749 MKNHGVEKSIG-WSTIDICGFMKNQLTQWQHSLFEQSEFR 787
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/359 (18%), Positives = 138/359 (38%), Gaps = 42/359 (11%)
Query: 248 PSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGL 307
P D W +++ + + L+ +R M G P+ + SA A G
Sbjct: 68 PCPDAFLWNSLLRSRHRASDFASTLSAHRRMRASGARPSRFTAPLVASAAAELGALPVGA 127
Query: 308 QIHSIIVKAGF---DCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFI 364
+H+ V+ G D + +++++ YA CG + A F+ + + +W A+I+G +
Sbjct: 128 AVHAYSVRFGLLEGDGSVAVASSLVYMYARCGSVRDAVRLFDEMPERDVVAWTAVISGCV 187
Query: 365 RNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVS 424
NG E + + + D G +PN TM S
Sbjct: 188 CNGQC---------------------------GEGLSYLVRMVRSAGDGGARPNSRTMES 220
Query: 425 VFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRT 484
A G L G H + + + ++ +++ MY KC S A +F + ++
Sbjct: 221 GLEACGVLGELSVGTCLHGFGVKAGVGHCPSVVSSLFSMYTKCDSTEDARILFPELPEK- 279
Query: 485 TSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVD----L 540
+ W ++I G A ++++ +E+ ++ + + +C AGL +
Sbjct: 280 -DLVSWTSLIGAYCRAGHAEKAVELFLGMEESGLQPDEVVI-----SCLLAGLGNDAKVR 333
Query: 541 GERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAA 599
G + F + N + ++ + + Q++ A V R M + D W +++ A
Sbjct: 334 GGKTFHAAIVRRNFGDSVLIGNALISMYAKCKQVDIAATVFR-MLHQRDTDSWSSMVVA 391
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 111/263 (42%), Gaps = 45/263 (17%)
Query: 26 LVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCS 85
LVS + C+ A+ G+ IHS + GLE + I +L+++Y KCG + A+ MFDS
Sbjct: 524 LVSVISSCANLAALEHGELIHSHVKDVGLECDLSICTALVDMYMKCGQLGIARKMFDSML 583
Query: 86 TLDPVACNIMISGYIRNDRLNDAREVF---DKTPIKC-CVSYTSMIMGFAQNDCWREALE 141
D V N+MISGY + A ++F ++ +K +++ +++ + E
Sbjct: 584 ERDVVTWNVMISGYGMHGEAIQALKLFSMMERGNVKPNSLTFLAILSACCHAGLVDKGRE 643
Query: 142 VFRDMRILGVIPN---EVTLASVISSSVHL---------------GGIW-----ECRMLH 178
+F M + PN + ++ S HL GGIW C+M
Sbjct: 644 LFTRMEEYSLEPNLKHYACMVDLLGKSGHLQEAEDVVSAMPIEPDGGIWGTLLGACKMHD 703
Query: 179 GLVIKLMI-----------DGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNI---VSW 224
+ L + DG+ I+ + N Y E L D MK + + W
Sbjct: 704 NFEMGLRVAKKAFASDPENDGYYILMS---NSYGSAEKWNEIEKLRDMMKNHGVEKSIGW 760
Query: 225 NVM-LNGFAKAGLVELARELFER 246
+ + + GF K L + LFE+
Sbjct: 761 STIDICGFMKNQLTQWQHSLFEQ 783
>gi|356546516|ref|XP_003541672.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Glycine max]
Length = 591
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 157/425 (36%), Positives = 244/425 (57%), Gaps = 33/425 (7%)
Query: 240 ARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGR 299
A +F I + +V +W T+I GY + + S A YR M+ + P+ L+ A +
Sbjct: 71 AYNVFTVIHNPNVFTWNTIIRGYAESDNPSPAFLFYRQMVVSCVEPDTHTYPFLLKAISK 130
Query: 300 AMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNAL 359
++ EG IHS+ ++ GF+ F+Q +++H YAACG
Sbjct: 131 SLNVREGEAIHSVTIRNGFESLVFVQNSLLHIYAACGDT--------------------- 169
Query: 360 IAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNE 419
E A ++F M++RD+ +W++MI+G+A N +PN AL LF M GV+P+
Sbjct: 170 ----------ESAYKVFELMKERDLVAWNSMINGFALNGRPNEALTLFREMSVEGVEPDG 219
Query: 420 ITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYH 479
T+VS+ A A G L+ GR H Y+L ++ N +++ +++D+YAKCG+I A VF
Sbjct: 220 FTVVSLLSASAELGALELGRRVHVYLLKVGLSKNSHVTNSLLDLYAKCGAIREAQRVFSE 279
Query: 480 IRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVD 539
+ +R +VS W ++I GLA++G L+++ ++E + + + ITF+GVL C H G++D
Sbjct: 280 MSERN-AVS-WTSLIVGLAVNGFGEEALELFKEMEGQGLVPSEITFVGVLYACSHCGMLD 337
Query: 540 LGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAA 599
G YF+ MK + P ++HYGCMVDLL RAG ++ A E I++MP++ + VIW TLL A
Sbjct: 338 EGFEYFRRMKEECGIIPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGA 397
Query: 600 SRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLP 659
IHG++ +GE A L L+P H VLLSN+YA RW D IR+ M G+K+ P
Sbjct: 398 CTIHGHLGLGEIARSHLLNLEPKHSGDYVLLSNLYASERRWSDVQVIRRSMLKDGVKKTP 457
Query: 660 GFSGV 664
G+S V
Sbjct: 458 GYSLV 462
Score = 125 bits (314), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 90/350 (25%), Positives = 152/350 (43%), Gaps = 92/350 (26%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
L+ S + V +G+ IHS+ ++G ES F+QNSL+++YA CG A +F+ D
Sbjct: 125 LKAISKSLNVREGEAIHSVTIRNGFESLVFVQNSLLHIYAACGDTESAYKVFELMKERDL 184
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
VA N MI+G+ N R N EAL +FR+M +
Sbjct: 185 VAWNSMINGFALNGRPN-------------------------------EALTLFREMSVE 213
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
GV P+ T+ S++S+S LG + R +H ++K+ + ++ +LL++Y C ++ EA
Sbjct: 214 GVEPDGFTVVSLLSASAELGALELGRRVHVYLLKVGLSKNSHVTNSLLDLYAKCGAIREA 273
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLS 269
+ +F EM ERN VSW ++ G A G E
Sbjct: 274 QRVFSEMSERNAVSWTSLIVGLAVNGFGE------------------------------- 302
Query: 270 EALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATII 329
EAL +++ M G+ P+++ V ++ AC H ++ GF+ +
Sbjct: 303 EALELFKEMEGQGLVPSEITFVGVLYACS-----------HCGMLDEGFEYFR------- 344
Query: 330 HFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNM 379
R++ E GI I + ++ R G+++ A + NM
Sbjct: 345 ------------RMKEECGIIPRIEHYGCMVDLLSRAGLVKQAYEYIQNM 382
Score = 118 bits (296), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 106/466 (22%), Positives = 184/466 (39%), Gaps = 105/466 (22%)
Query: 122 SYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLV 181
++ ++I G+A++D A +R M + V P+ T ++ + + E +H +
Sbjct: 85 TWNTIIRGYAESDNPSPAFLFYRQMVVSCVEPDTHTYPFLLKAISKSLNVREGEAIHSVT 144
Query: 182 IKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELAR 241
I+ + V + +LL++Y C G E A
Sbjct: 145 IRNGFESLVFVQNSLLHIYAAC-------------------------------GDTESAY 173
Query: 242 ELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAM 301
++FE + +D+V+W +MI+G+ R +EALT++R M +G+ P+ +V L+SA
Sbjct: 174 KVFELMKERDLVAWNSMINGFALNGRPNEALTLFREMSVEGVEPDGFTVVSLLSASAELG 233
Query: 302 AFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIA 361
A G ++H ++K G + +++ YA CG I A+ F + + SW +LI
Sbjct: 234 ALELGRRVHVYLLKVGLSKNSHVTNSLLDLYAKCGAIREAQRVFSEMSERNAVSWTSLIV 293
Query: 362 GFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEIT 421
G NG E+ ALELF M G+ P+EIT
Sbjct: 294 GLAVNGFGEE-------------------------------ALELFKEMEGQGLVPSEIT 322
Query: 422 MVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIR 481
V V A + G L EG FE F ++
Sbjct: 323 FVGVLYACSHCGMLDEG-----------------------------------FEYFRRMK 347
Query: 482 DRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLG 541
+ + C + + A L + Y ++ ++ N++ + +L C G + LG
Sbjct: 348 EECGIIPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLGLG 407
Query: 542 ERYFKSMKSVYNVEPDLKHYGCMV---DLLGRAGQLEDAEEVIRSM 584
E + + N+EP KH G V +L + D + + RSM
Sbjct: 408 E---IARSHLLNLEP--KHSGDYVLLSNLYASERRWSDVQVIRRSM 448
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 117/269 (43%), Gaps = 44/269 (16%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+VS L + A+ G+++H + K GL N+ + NSL++LYAKCG I +A+ +F
Sbjct: 220 FTVVSLLSASAELGALELGRRVHVYLLKVGLSKNSHVTNSLLDLYAKCGAIREAQRVFSE 279
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
S RN VS+TS+I+G A N EALE+F
Sbjct: 280 MSE--------------RN-----------------AVSWTSLIVGLAVNGFGEEALELF 308
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWEC-----RMLHGLVIKLMIDGFVIISTNLLN 198
++M G++P+E+T V+ + H G + E RM I I+ + +++
Sbjct: 309 KEMEGQGLVPSEITFVGVLYACSHCGMLDEGFEYFRRMKEECGIIPRIEHY----GCMVD 364
Query: 199 MYCVCSSLVEARSLFDEMK-ERNIVSWNVMLNG---FAKAGLVELARELFERIPSKDVVS 254
+ + +A M + N V W +L GL E+AR + K
Sbjct: 365 LLSRAGLVKQAYEYIQNMPVQPNAVIWRTLLGACTIHGHLGLGEIARSHLLNLEPKHSGD 424
Query: 255 WGTMIDGYLQVERLSEALTMYRAMLCDGI 283
+ + + Y R S+ + R+ML DG+
Sbjct: 425 YVLLSNLYASERRWSDVQVIRRSMLKDGV 453
>gi|242066372|ref|XP_002454475.1| hypothetical protein SORBIDRAFT_04g031840 [Sorghum bicolor]
gi|241934306|gb|EES07451.1| hypothetical protein SORBIDRAFT_04g031840 [Sorghum bicolor]
Length = 706
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 199/623 (31%), Positives = 315/623 (50%), Gaps = 82/623 (13%)
Query: 91 ACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILG 150
A N ++ Y++ L+ A + D TP + +Y S+I + +AL F DM G
Sbjct: 67 ATNSLLHAYLQCGLLSRALRLLDGTPRRDAATYASLISAHCRLGAPLDALRAFLDMLDWG 126
Query: 151 -----VIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSS 205
V PNE T A+V+ + RM+HG ++ G + +L+NMY
Sbjct: 127 CSDAAVRPNEFTAAAVLQACGLARDERLGRMVHGYLVAGGFCGDPFVVGSLVNMY----- 181
Query: 206 LVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQV 265
AKAG V AR L +P +DVVSW +I G +
Sbjct: 182 --------------------------AKAGDVVSARRLVLGLPCRDVVSWTAIISGCVLN 215
Query: 266 ERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQ 325
L E L ++ ML DG+ PN+V ++ +I AC A +H+++V + +
Sbjct: 216 GMLEEGLEVFVMMLEDGVLPNNVTMLSVIQACSLMGASELFSPVHALVVLLELEHDASVV 275
Query: 326 ATIIHFYAACGRINLARLQFE--------------------------------LGIKDH- 352
++I YA G + A F +G+ H
Sbjct: 276 NSLIMMYAKNGFVEEAIWLFRGFYLKSGNVCSNEDVLAAVLYGCTISGSVKNGVGVHAHT 335
Query: 353 --------IASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMAL 404
I+ N+L+ + R I+ A +F M+ +D+ SW+ +IS A++++ N A+
Sbjct: 336 IKIGAFPSISIENSLMGMYARFEQIDAAHFVFEGMKVKDIVSWNTIISCLAKSDRVNEAM 395
Query: 405 ELFHGMVDA--GVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIID 462
ELF + A G+ P+ +T++S+ A +++G L +G+ H Y++ + + ++ A+I
Sbjct: 396 ELFSVLHAAAGGLAPDFVTVLSILQACSNAGLLHQGQMLHGYIMKSGFVYDVSICNALIT 455
Query: 463 MYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKL-N 521
MYAK G I+ A E+ + D VS WN++I MHGD +L L+++ L+ + N
Sbjct: 456 MYAKLGRIDFA-EMIFERMDIKDLVS-WNSMINAYGMHGDGHLALRVFHQLKDAGTPVPN 513
Query: 522 SITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVI 581
+ITF+ V+S C H+GL+ G + F+SM +++EP + HY C+VDLLGR+G+ +AEE I
Sbjct: 514 AITFVSVISACSHSGLISEGYKCFESMGRDHSIEPSMDHYACVVDLLGRSGRFAEAEEFI 573
Query: 582 RSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWE 641
R MP+ + IWG LLAA ++HGNV++ E+AAK L+ L+P RV LSN YA AGRW
Sbjct: 574 RDMPVHPNSSIWGPLLAACQLHGNVDLAEKAAKELSALEPESDIWRVSLSNTYASAGRWR 633
Query: 642 DAFSIRKEMRDCGMKRLPGFSGV 664
DA IR EMR G+++ G+S V
Sbjct: 634 DAAKIRTEMRRVGLRKETGWSFV 656
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 141/540 (26%), Positives = 228/540 (42%), Gaps = 116/540 (21%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E + L+ C G+ +H + G + F+ SL+N+YAK G
Sbjct: 136 EFTAAAVLQACGLARDERLGRMVHGYLVAGGFCGDPFVVGSLVNMYAKAG---------- 185
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
D V+ AR + P + VS+T++I G N E LEV
Sbjct: 186 -----DVVS----------------ARRLVLGLPCRDVVSWTAIISGCVLNGMLEEGLEV 224
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
F M GV+PN VT+ SVI + +G +H LV+ L ++ + +L+ MY
Sbjct: 225 FVMMLEDGVLPNNVTMLSVIQACSLMGASELFSPVHALVVLLELEHDASVVNSLIMMYAK 284
Query: 203 CSSLVEARSLFDE--MKERNIVS------------------------------------- 223
+ EA LF +K N+ S
Sbjct: 285 NGFVEEAIWLFRGFYLKSGNVCSNEDVLAAVLYGCTISGSVKNGVGVHAHTIKIGAFPSI 344
Query: 224 --WNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAM--L 279
N ++ +A+ ++ A +FE + KD+VSW T+I + +R++EA+ ++ +
Sbjct: 345 SIENSLMGMYARFEQIDAAHFVFEGMKVKDIVSWNTIISCLAKSDRVNEAMELFSVLHAA 404
Query: 280 CDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDF-IQATIIHFYAACGRI 338
G+AP+ V ++ ++ AC A +G +H I+K+GF YD I +I YA GRI
Sbjct: 405 AGGLAPDFVTVLSILQACSNAGLLHQGQMLHGYIMKSGF-VYDVSICNALITMYAKLGRI 463
Query: 339 NLARLQFE-LGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQN 397
+ A + FE + IKD + SWN +MI+ Y +
Sbjct: 464 DFAEMIFERMDIKD-LVSWN-------------------------------SMINAYGMH 491
Query: 398 EQPNMALELFHGMVDAGVK-PNEITMVSVFCAIASSGTLKEGRWAHEYV-LNNSITLNDN 455
++AL +FH + DAG PN IT VSV A + SG + EG E + ++SI + +
Sbjct: 492 GDGHLALRVFHQLKDAGTPVPNAITFVSVISACSHSGLISEGYKCFESMGRDHSIEPSMD 551
Query: 456 LSAAIIDMYAKCGSINTAFEVFYHIRDRTT--SVSPWNAIICGLAMHGDANLTLKIYSDL 513
A ++D+ + G A E IRD + S W ++ +HG+ +L K +L
Sbjct: 552 HYACVVDLLGRSGRFAEAEEF---IRDMPVHPNSSIWGPLLAACQLHGNVDLAEKAAKEL 608
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 128/267 (47%), Gaps = 13/267 (4%)
Query: 353 IASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMV- 411
+A+ N+L+ +++ G++ A +L + +RD +++++IS + + P AL F M+
Sbjct: 65 LAATNSLLHAYLQCGLLSRALRLLDGTPRRDAATYASLISAHCRLGAPLDALRAFLDMLD 124
Query: 412 ----DAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKC 467
DA V+PNE T +V A + + GR H Y++ + + ++++MYAK
Sbjct: 125 WGCSDAAVRPNEFTAAAVLQACGLARDERLGRMVHGYLVAGGFCGDPFVVGSLVNMYAKA 184
Query: 468 GSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIG 527
G + +A + + R V W AII G ++G L+++ + + + N++T +
Sbjct: 185 GDVVSARRLVLGLPCR--DVVSWTAIISGCVLNGMLEEGLEVFVMMLEDGVLPNNVTMLS 242
Query: 528 VLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMK 587
V+ C G +L ++ + +E D ++ + + G +E+A + R +K
Sbjct: 243 VIQACSLMGASELFSP-VHALVVLLELEHDASVVNSLIMMYAKNGFVEEAIWLFRGFYLK 301
Query: 588 ADVV-----IWGTLLAASRIHGNVEVG 609
+ V + +L I G+V+ G
Sbjct: 302 SGNVCSNEDVLAAVLYGCTISGSVKNG 328
>gi|449453744|ref|XP_004144616.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449511814|ref|XP_004164061.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 681
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 164/490 (33%), Positives = 262/490 (53%), Gaps = 65/490 (13%)
Query: 237 VELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISA 296
++ A LF+ I +VSW +I Y++ +R ++A+ ++ +LCD P+ + ++
Sbjct: 65 LQYAHSLFDWIQEPTLVSWNLLIKCYIENQRSNDAIALFCKLLCD-FVPDSFTLPCVLKG 123
Query: 297 CGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFY------------------------ 332
C R A EG QIH +++K GF F+ ++++ Y
Sbjct: 124 CARLGALQEGKQIHGLVLKIGFGVDKFVLSSLVSMYSKCGEIELCRKVFDRMEDKDVVSW 183
Query: 333 -------AACGRINLARLQFE-LGIKDHIA------------------------------ 354
A CG I LA FE + KD +
Sbjct: 184 NSLIDGYARCGEIELALEMFEEMPEKDSFSWTILIDGLSKSGKLEAARDVFDRMPIRNSV 243
Query: 355 SWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAG 414
SWNA+I G+++ G A++LF+ M +R + +W++MI+GY +N+Q AL+LF M+
Sbjct: 244 SWNAMINGYMKAGDSNTAKELFDQMPERSLVTWNSMITGYERNKQFTKALKLFEVMLRED 303
Query: 415 VKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAF 474
+ PN T++ A + +L GRW H Y++ + + L +I+MY+KCGS+ +A
Sbjct: 304 ISPNYTTILGAVSAASGMVSLGTGRWVHSYIVKSGFKTDGVLGTLLIEMYSKCGSVKSAL 363
Query: 475 EVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCH 534
VF I + + W ++I GL MHG TL+++ ++ + +K ++ITFIGVL+ C H
Sbjct: 364 RVFRSIPKK--KLGHWTSVIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNACSH 421
Query: 535 AGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWG 594
AG + RYFK M Y ++P ++HYGC++D+L RAG LE+A++ I MP+KA+ VIW
Sbjct: 422 AGFAEDAHRYFKMMTYDYGIKPSIEHYGCLIDVLCRAGHLEEAKDTIERMPIKANKVIWT 481
Query: 595 TLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCG 654
+LL+ SR HGN+ +GE AA+ L L P V+LSN+YA AG WE +R+ M+ G
Sbjct: 482 SLLSGSRKHGNIRMGEYAAQHLIDLAPDTTGCYVILSNMYAAAGLWEKVRQVREMMKKKG 541
Query: 655 MKRLPGFSGV 664
MK+ PG S +
Sbjct: 542 MKKDPGCSSI 551
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 126/486 (25%), Positives = 208/486 (42%), Gaps = 109/486 (22%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
L L+ C+ A+ +G+QIH L+ K G + F+ +SL+++Y+KCG I
Sbjct: 115 FTLPCVLKGCARLGALQEGKQIHGLVLKIGFGVDKFVLSSLVSMYSKCGEIELC------ 168
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
R+VFD+ K VS+ S+I G+A+ ALE+F
Sbjct: 169 -------------------------RKVFDRMEDKDVVSWNSLIDGYARCGEIELALEMF 203
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
+M P + + + I +IDG
Sbjct: 204 EEM------PEKDSFSWTI----------------------LIDGL-----------SKS 224
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYL 263
L AR +FD M RN VSWN M+NG+ KAG A+ELF+++P + +V+W +MI GY
Sbjct: 225 GKLEAARDVFDRMPIRNSVSWNAMINGYMKAGDSNTAKELFDQMPERSLVTWNSMITGYE 284
Query: 264 QVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDF 323
+ ++ ++AL ++ ML + I+PN I+ +SA ++ G G +HS IVK+GF
Sbjct: 285 RNKQFTKALKLFEVMLREDISPNYTTILGAVSAASGMVSLGTGRWVHSYIVKSGFKTDGV 344
Query: 324 IQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRD 383
+ +I Y+ CG + A F K + W ++I G +G++E
Sbjct: 345 LGTLLIEMYSKCGSVKSALRVFRSIPKKKLGHWTSVIVGLGMHGLVEQ------------ 392
Query: 384 VYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHE 443
LELF M G+KP+ IT + V A + +G ++ AH
Sbjct: 393 -------------------TLELFDEMCRTGLKPHAITFIGVLNACSHAGFAED---AHR 430
Query: 444 Y----VLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAM 499
Y + I + +ID+ + G + A + + + V W +++ G
Sbjct: 431 YFKMMTYDYGIKPSIEHYGCLIDVLCRAGHLEEAKDTIERMPIKANKVI-WTSLLSGSRK 489
Query: 500 HGDANL 505
HG+ +
Sbjct: 490 HGNIRM 495
>gi|225433487|ref|XP_002264838.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06140,
mitochondrial [Vitis vinifera]
gi|298205230|emb|CBI17289.3| unnamed protein product [Vitis vinifera]
Length = 688
Score = 296 bits (758), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 173/572 (30%), Positives = 278/572 (48%), Gaps = 65/572 (11%)
Query: 94 IMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIP 153
++ YI+ L+ A + F+ + S+ +++ ++N C+ + L++F+ M G +
Sbjct: 52 MIFGAYIQLGSLHVASKAFNHITFENLHSWNTILASHSKNKCFYDVLQLFKRMLKEGKLV 111
Query: 154 NEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLF 213
+ L + + L ++ H L IKL ++G ++ L+N+Y
Sbjct: 112 DSFNLVFAVKACFGLSLFQGAKLFHSLAIKLRLEGDPYVAPALMNVY------------- 158
Query: 214 DEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALT 273
+ G +E A ++FE +P K+ V WG MI G+L
Sbjct: 159 ------------------TELGSLEEAHKVFEEVPLKNSVIWGVMIKGHLNFSEEFGVFE 200
Query: 274 MYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGF-DCYDFIQATIIHFY 332
++ M G + ++ LI ACG A EG H + +K F D F+Q +++ Y
Sbjct: 201 LFSRMRRSGFELDPFVVEGLIQACGNVYAGKEGKTFHGLCIKKNFIDSNFFLQTSLVDMY 260
Query: 333 AACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMIS 392
CG ++ A +LF + RDV WSA+I+
Sbjct: 261 MKCGFLDFAL-------------------------------KLFEEISYRDVVVWSAIIA 289
Query: 393 GYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITL 452
G+A+N + ++ +F M+ V PN +T S+ A +S G+LK+GR H Y++ N + L
Sbjct: 290 GFARNGRALESISMFRQMLADSVTPNSVTFASIVLACSSLGSLKQGRSVHGYMIRNGVEL 349
Query: 453 NDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSD 512
+ + IDMYAKCG I TA+ VF I ++ +V W+ +I G MHG L ++ +
Sbjct: 350 DVKNYTSFIDMYAKCGCIVTAYRVFCQIPEK--NVFSWSTMINGFGMHGLCAEALNLFYE 407
Query: 513 LEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAG 572
+ N NS+TF+ VLS C H+G ++ G +FKSM Y + P +HY CMVDLLGRAG
Sbjct: 408 MRSVNQLPNSVTFVSVLSACSHSGRIEEGWSHFKSMSRDYGITPVEEHYACMVDLLGRAG 467
Query: 573 QLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSN 632
++++A I +MP + WG LL A RIH E+ E AK L L+ V+LSN
Sbjct: 468 KIDEALSFINNMPTEPGASAWGALLGACRIHRRAELAEEVAKKLLPLESDQSGVYVMLSN 527
Query: 633 IYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
IYAD G WE R +M + G+ ++ GF+ +
Sbjct: 528 IYADVGMWEMVKKTRLKMCEKGIHKIVGFTSI 559
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 119/492 (24%), Positives = 201/492 (40%), Gaps = 100/492 (20%)
Query: 26 LVSALRYCSAHIAVSQGQQI-HSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSC 84
LV A++ C +++ QG ++ HSL K LE + ++ +L+N+Y + G
Sbjct: 116 LVFAVKACFG-LSLFQGAKLFHSLAIKLRLEGDPYVAPALMNVYTELG------------ 162
Query: 85 STLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFR 144
L +A +VF++ P+K V + MI G E+F
Sbjct: 163 -------------------SLEEAHKVFEEVPLKNSVIWGVMIKGHLNFSEEFGVFELFS 203
Query: 145 DMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKL-MIDGFVIISTNLLNMYCVC 203
MR G + + +I + ++ E + HGL IK ID + T+L++MY C
Sbjct: 204 RMRRSGFELDPFVVEGLIQACGNVYAGKEGKTFHGLCIKKNFIDSNFFLQTSLVDMYMKC 263
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYL 263
G ++ A +LFE I +DVV W +I G+
Sbjct: 264 -------------------------------GFLDFALKLFEEISYRDVVVWSAIIAGFA 292
Query: 264 QVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDF 323
+ R E+++M+R ML D + PN V ++ AC + +G +H +++ G +
Sbjct: 293 RNGRALESISMFRQMLADSVTPNSVTFASIVLACSSLGSLKQGRSVHGYMIRNGVELDVK 352
Query: 324 IQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRD 383
+ I YA CG I A F + ++ SW+ +I GF +G+ +
Sbjct: 353 NYTSFIDMYAKCGCIVTAYRVFCQIPEKNVFSWSTMINGFGMHGLCAE------------ 400
Query: 384 VYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHE 443
AL LF+ M PN +T VSV A + SG ++EG W+H
Sbjct: 401 -------------------ALNLFYEMRSVNQLPNSVTFVSVLSACSHSGRIEEG-WSHF 440
Query: 444 YVLNN--SITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHG 501
++ IT + A ++D+ + G I+ A F + S W A++ +H
Sbjct: 441 KSMSRDYGITPVEEHYACMVDLLGRAGKIDEALS-FINNMPTEPGASAWGALLGACRIHR 499
Query: 502 DANLTLKIYSDL 513
A L ++ L
Sbjct: 500 RAELAEEVAKKL 511
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 145/304 (47%), Gaps = 40/304 (13%)
Query: 15 ANLQNSDYEL---ALVSALRYCSAHIAVSQGQQIHSL-IFKSGLESNTFIQNSLINLYAK 70
+ ++ S +EL + ++ C A +G+ H L I K+ ++SN F+Q SL+++Y K
Sbjct: 203 SRMRRSGFELDPFVVEGLIQACGNVYAGKEGKTFHGLCIKKNFIDSNFFLQTSLVDMYMK 262
Query: 71 CGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGF 130
CG + A +F+ S D V ++++I GF
Sbjct: 263 CGFLDFALKLFEEISYRDVVV-------------------------------WSAIIAGF 291
Query: 131 AQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFV 190
A+N E++ +FR M V PN VT AS++ + LG + + R +HG +I+ ++ V
Sbjct: 292 ARNGRALESISMFRQMLADSVTPNSVTFASIVLACSSLGSLKQGRSVHGYMIRNGVELDV 351
Query: 191 IISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPS- 249
T+ ++MY C +V A +F ++ E+N+ SW+ M+NGF GL A LF + S
Sbjct: 352 KNYTSFIDMYAKCGCIVTAYRVFCQIPEKNVFSWSTMINGFGMHGLCAEALNLFYEMRSV 411
Query: 250 ---KDVVSWGTMIDGYLQVERLSEALTMYRAMLCD-GIAPNDVMIVDLISACGRAMAFGE 305
+ V++ +++ R+ E + +++M D GI P + ++ GRA E
Sbjct: 412 NQLPNSVTFVSVLSACSHSGRIEEGWSHFKSMSRDYGITPVEEHYACMVDLLGRAGKIDE 471
Query: 306 GLQI 309
L
Sbjct: 472 ALSF 475
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 100/449 (22%), Positives = 193/449 (42%), Gaps = 56/449 (12%)
Query: 219 RNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAM 278
R+++ ++ + + G + +A + F I +++ SW T++ + + + + L +++ M
Sbjct: 45 RSLLFGPMIFGAYIQLGSLHVASKAFNHITFENLHSWNTILASHSKNKCFYDVLQLFKRM 104
Query: 279 LCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRI 338
L +G + +V + AC F HS+ +K + ++ +++ Y G
Sbjct: 105 LKEGKLVDSFNLVFAVKACFGLSLFQGAKLFHSLAIKLRLEGDPYVAPALMNVYTELGS- 163
Query: 339 NLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNE 398
+E+A ++F + ++ W MI G+
Sbjct: 164 ------------------------------LEEAHKVFEEVPLKNSVIWGVMIKGHLNFS 193
Query: 399 QPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVL-NNSITLNDNLS 457
+ ELF M +G + + + + A + KEG+ H + N I N L
Sbjct: 194 EEFGVFELFSRMRRSGFELDPFVVEGLIQACGNVYAGKEGKTFHGLCIKKNFIDSNFFLQ 253
Query: 458 AAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRN 517
+++DMY KCG ++ A ++F I R V W+AII G A +G A ++ ++ + +
Sbjct: 254 TSLVDMYMKCGFLDFALKLFEEISYRDVVV--WSAIIAGFARNGRALESISMFRQMLADS 311
Query: 518 IKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYN-VEPDLKHYGCMVDLLGRAGQLED 576
+ NS+TF ++ C G + G M + N VE D+K+Y +D+ + G +
Sbjct: 312 VTPNSVTFASIVLACSSLGSLKQGRSVHGYM--IRNGVELDVKNYTSFIDMYAKCGCIVT 369
Query: 577 AEEVIRSMPMKADVVIWGTLLAASRIHG------NVEVGERAAKSLAGLQPSHGPSRVLL 630
A V +P K +V W T++ +HG N+ R+ L P+ V
Sbjct: 370 AYRVFCQIPEK-NVFSWSTMINGFGMHGLCAEALNLFYEMRSVNQL--------PNSVTF 420
Query: 631 SNIY---ADAGRWEDAFSIRKEM-RDCGM 655
++ + +GR E+ +S K M RD G+
Sbjct: 421 VSVLSACSHSGRIEEGWSHFKSMSRDYGI 449
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 88/205 (42%), Gaps = 11/205 (5%)
Query: 421 TMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHI 480
T++S+F + TL + +L N++ + I Y + GS++ A + F HI
Sbjct: 17 TLLSLF---RFTKTLASNHQLNAQILVNALHRSLLFGPMIFGAYIQLGSLHVASKAFNHI 73
Query: 481 RDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDL 540
++ WN I+ + + L+++ + K ++S + + C L
Sbjct: 74 --TFENLHSWNTILASHSKNKCFYDVLQLFKRMLKEGKLVDSFNLVFAVKACFGLSLFQ- 130
Query: 541 GERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAA- 599
G + F S+ +E D ++++ G LE+A +V +P+K + VIWG ++
Sbjct: 131 GAKLFHSLAIKLRLEGDPYVAPALMNVYTELGSLEEAHKVFEEVPLK-NSVIWGVMIKGH 189
Query: 600 ---SRIHGNVEVGERAAKSLAGLQP 621
S G E+ R +S L P
Sbjct: 190 LNFSEEFGVFELFSRMRRSGFELDP 214
>gi|297798072|ref|XP_002866920.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312756|gb|EFH43179.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 559
Score = 296 bits (758), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 182/546 (33%), Positives = 278/546 (50%), Gaps = 70/546 (12%)
Query: 122 SYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLV 181
SY +++ +A D R + V+R G P+ T V + GI E + +HG V
Sbjct: 73 SYNTLLSSYAVCDKPRMTIFVYRVFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIHGTV 132
Query: 182 IKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELAR 241
K+ + + +L++ Y VC A +FD+M
Sbjct: 133 TKMGFYDDIYVQNSLVHFYGVCGESRNACKVFDQM------------------------- 167
Query: 242 ELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAM 301
P +DVVSW +I G+ + EAL + M + PN V + + GR
Sbjct: 168 ------PVRDVVSWTGIITGFTRTGLYKEALDTFSKM---DVEPNLATYVCALVSSGRVG 218
Query: 302 AFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIA 361
G IH +I+K R +L L+ + NALI
Sbjct: 219 CLSLGKGIHGLILK---------------------RASLISLE----------TGNALID 247
Query: 362 GFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGM-VDAGVKPNEI 420
+++ + DA +F +QK+D SW++MISG E+ N A+ELF M +G+KP+
Sbjct: 248 MYVKCEQLSDAMTVFGELQKKDKVSWNSMISGLVHCERSNEAIELFSMMQTSSGIKPDGH 307
Query: 421 TMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHI 480
+ SV A AS G + GRW HEYVL+ I + ++ AI+DMYAKCG I TA ++F I
Sbjct: 308 ILTSVLSACASLGAVDYGRWVHEYVLSAGIKWDTHIGTAIVDMYAKCGYIETALKIFNGI 367
Query: 481 RDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDL 540
R + +V WNA++ GLA+HG + +L+ + ++ K K N +TF+ +L+ CCH GLVD
Sbjct: 368 RRK--NVFTWNALLGGLAIHGHGHESLRYFEEMVKLGFKPNLVTFLAILNACCHTGLVDE 425
Query: 541 GERYFKSMKS-VYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAA 599
G RYF MK+ YN+ P L+HYGC++DL RAG L++A E+I++MP+K DV I G +L+A
Sbjct: 426 GRRYFHKMKTREYNLSPKLEHYGCLIDLFCRAGLLDEALELIKAMPVKPDVRICGAVLSA 485
Query: 600 SRIHGNV-EVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRL 658
+ G + E+ + S ++ VLLSNI+A RW+D IR+ M+ G+ ++
Sbjct: 486 CKSRGTLMELPKEILDSFLEMEFEDSGVYVLLSNIFAANRRWDDVSRIRRLMKVKGISKV 545
Query: 659 PGFSGV 664
PG S +
Sbjct: 546 PGSSSI 551
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 110/473 (23%), Positives = 187/473 (39%), Gaps = 105/473 (22%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
+ C + +G+QIH + K G + ++QNSL++ Y CG A +FD D
Sbjct: 113 FKACGKFSGIREGKQIHGTVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFDQMPVRDV 172
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
V+ +I+G+ R ++EAL+ F M
Sbjct: 173 VSWTGIITGFTR-------------------------------TGLYKEALDTFSKM--- 198
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
V PN T + SS +G + + +HGL++K + L++MY C L +A
Sbjct: 199 DVEPNLATYVCALVSSGRVGCLSLGKGIHGLILKRASLISLETGNALIDMYVKCEQLSDA 258
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLS 269
++F E+++++ VSWN +MI G + ER +
Sbjct: 259 MTVFGELQKKDKVSWN-------------------------------SMISGLVHCERSN 287
Query: 270 EALTMYRAM-LCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATI 328
EA+ ++ M GI P+ ++ ++SAC A G +H ++ AG I I
Sbjct: 288 EAIELFSMMQTSSGIKPDGHILTSVLSACASLGAVDYGRWVHEYVLSAGIKWDTHIGTAI 347
Query: 329 IHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWS 388
+ YA CG I A F + ++ +WNAL+ G +G
Sbjct: 348 VDMYAKCGYIETALKIFNGIRRKNVFTWNALLGGLAIHG--------------------- 386
Query: 389 AMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNN 448
+ +L F MV G KPN +T +++ A +G + EGR +
Sbjct: 387 ----------HGHESLRYFEEMVKLGFKPNLVTFLAILNACCHTGLVDEGRRYFHKMKTR 436
Query: 449 SITLNDNLS--AAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAM 499
L+ L +ID++ + G ++ A E+ + V P + ICG +
Sbjct: 437 EYNLSPKLEHYGCLIDLFCRAGLLDEALELI-----KAMPVKP-DVRICGAVL 483
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 96/231 (41%), Gaps = 72/231 (31%)
Query: 26 LVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCS 85
L S L C++ AV G+ +H + +G++ +T I +++++YAKCG I A +F+
Sbjct: 309 LTSVLSACASLGAVDYGRWVHEYVLSAGIKWDTHIGTAIVDMYAKCGYIETALKIFNG-- 366
Query: 86 TLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRD 145
IR + VF ++ +++ G A + E+L F +
Sbjct: 367 --------------IRR------KNVF---------TWNALLGGLAIHGHGHESLRYFEE 397
Query: 146 MRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSS 205
M LG PN VT +++++ H G ++D
Sbjct: 398 MVKLGFKPNLVTFLAILNACCHTG---------------LVD------------------ 424
Query: 206 LVEARSLFDEMKER------NIVSWNVMLNGFAKAGLVELARELFERIPSK 250
E R F +MK R + + +++ F +AGL++ A EL + +P K
Sbjct: 425 --EGRRYFHKMKTREYNLSPKLEHYGCLIDLFCRAGLLDEALELIKAMPVK 473
>gi|359497788|ref|XP_002273247.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Vitis vinifera]
Length = 580
Score = 296 bits (758), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 158/511 (30%), Positives = 280/511 (54%), Gaps = 8/511 (1%)
Query: 153 PNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSL 212
P +S+IS + + ++LH IK + ++ L++ Y C S+ A +
Sbjct: 12 PAHQHYSSLISKCITTRHLKLGKLLHSHFIKTALIFTTFLANRLIDFYSKCDSIQSAHKV 71
Query: 213 FDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEAL 272
F + +N SWN++++ ++++GL A L +++P ++VS+ ++I G E+L
Sbjct: 72 FHVLPVKNTHSWNIIISAYSRSGLFNEAHNLLDQMPKPNLVSYNSLISGLGHHGFRKESL 131
Query: 273 TMYRAML--CDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIH 330
+++ ML C + ++ +V L+ +C A Q+H + G + I +I
Sbjct: 132 NVFKTMLKQCSNVLFDEFTLVSLVGSCASLGAPELLRQVHGAAIIIGLNSNIIIGNALID 191
Query: 331 FYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAM 390
Y CG +++ F + + SW +++A + + +EDA LF+ MQ+++ SW+A+
Sbjct: 192 AYGKCGEPDISFSIFSRMPERDVVSWTSMVAAYAQASRLEDAHWLFSQMQEKNTVSWTAL 251
Query: 391 ISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSI 450
I+G+AQN + + AL LF M + G+ P+ T SV A A + G+ H +++ ++
Sbjct: 252 IAGFAQNGRGDEALHLFEQMREEGIPPSAFTFASVLSACADLALIARGKEIHGHIIRSTC 311
Query: 451 T---LNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTL 507
N + A+IDMY KCG + +A +F + ++ + WN++I G A +G +L
Sbjct: 312 IDYFCNIFILNALIDMYCKCGQMRSATTLFKGMHEK--DIVSWNSLITGFAQNGHGEESL 369
Query: 508 KIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDL 567
++ + + +I+ N +TF+G+LS CCH GLV G R SM+ Y V P HY M+DL
Sbjct: 370 AVFERMIEADIRPNHVTFLGLLSACCHTGLVSEGLRILDSMEKDYGVCPRSDHYAIMIDL 429
Query: 568 LGRAGQLEDAEEVIRSMPMKADVV-IWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPS 626
LGR +LE+A +I+ P +D V +WG LL A RIHGN+++ RAA+ L L+P +
Sbjct: 430 LGRNNRLEEAMGLIKRAPKGSDHVGMWGALLGACRIHGNMDLARRAAEVLFQLEPGNAAR 489
Query: 627 RVLLSNIYADAGRWEDAFSIRKEMRDCGMKR 657
V++ NIYA A RW++A +R+ M + G+++
Sbjct: 490 YVMVYNIYAAASRWDEARQVRRLMMERGLRK 520
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 133/473 (28%), Positives = 222/473 (46%), Gaps = 37/473 (7%)
Query: 42 GQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIR 101
G+ +HS K+ L TF+ N LI+ Y+KC I A +F + + NI+IS Y R
Sbjct: 33 GKLLHSHFIKTALIFTTFLANRLIDFYSKCDSIQSAHKVFHVLPVKNTHSWNIIISAYSR 92
Query: 102 NDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDM--RILGVIPNEVTLA 159
+ N+A + D+ P VSY S+I G + +E+L VF+ M + V+ +E TL
Sbjct: 93 SGLFNEAHNLLDQMPKPNLVSYNSLISGLGHHGFRKESLNVFKTMLKQCSNVLFDEFTLV 152
Query: 160 SVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKER 219
S++ S LG R +HG I + ++ +II L++ Y C + S+F M ER
Sbjct: 153 SLVGSCASLGAPELLRQVHGAAIIIGLNSNIIIGNALIDAYGKCGEPDISFSIFSRMPER 212
Query: 220 NIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAML 279
++VSW M+ +A+A +E A LF ++ K+ VSW +I G+ Q R EAL ++ M
Sbjct: 213 DVVSWTSMVAAYAQASRLEDAHWLFSQMQEKNTVSWTALIAGFAQNGRGDEALHLFEQMR 272
Query: 280 CDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKA---GFDCYDFIQATIIHFYAACG 336
+GI P+ ++SAC G +IH I+++ + C FI +I Y CG
Sbjct: 273 EEGIPPSAFTFASVLSACADLALIARGKEIHGHIIRSTCIDYFCNIFILNALIDMYCKCG 332
Query: 337 RINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQ 396
++ A F+ + I SWN+LI GF +NG E+
Sbjct: 333 QMRSATTLFKGMHEKDIVSWNSLITGFAQNGHGEE------------------------- 367
Query: 397 NEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG-RWAHEYVLNNSITLNDN 455
+L +F M++A ++PN +T + + A +G + EG R + + +
Sbjct: 368 ------SLAVFERMIEADIRPNHVTFLGLLSACCHTGLVSEGLRILDSMEKDYGVCPRSD 421
Query: 456 LSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLK 508
A +ID+ + + A + + V W A++ +HG+ +L +
Sbjct: 422 HYAIMIDLLGRNNRLEEAMGLIKRAPKGSDHVGMWGALLGACRIHGNMDLARR 474
Score = 151 bits (382), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 116/362 (32%), Positives = 170/362 (46%), Gaps = 45/362 (12%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E LVS + C++ A +Q+H GL SN I N+LI+ Y KCG + S+F
Sbjct: 148 EFTLVSLVGSCASLGAPELLRQVHGAAIIIGLNSNIIIGNALIDAYGKCGEPDISFSIFS 207
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
D V+ M++ Y + RL DA +F + K VS+T++I GFAQN EAL +
Sbjct: 208 RMPERDVVSWTSMVAAYAQASRLEDAHWLFSQMQEKNTVSWTALIAGFAQNGRGDEALHL 267
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIK-LMIDGF--VIISTNLLNM 199
F MR G+ P+ T ASV+S+ L I + +HG +I+ ID F + I L++M
Sbjct: 268 FEQMREEGIPPSAFTFASVLSACADLALIARGKEIHGHIIRSTCIDYFCNIFILNALIDM 327
Query: 200 YCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMI 259
YC C + A +LF M E++IVSWN ++ GFA+ G E + +FER+ D
Sbjct: 328 YCKCGQMRSATTLFKGMHEKDIVSWNSLITGFAQNGHGEESLAVFERMIEAD-------- 379
Query: 260 DGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFD 319
I PN V + L+SAC EGL+I + K
Sbjct: 380 -----------------------IRPNHVTFLGLLSACCHTGLVSEGLRILDSMEKDYGV 416
Query: 320 CYDFIQATIIHFYAACGRINLARLQFELGI-------KDHIASWNALIAGFIRNGMIEDA 372
C I+ GR N RL+ +G+ DH+ W AL+ +G ++ A
Sbjct: 417 CPRSDHYAIM--IDLLGRNN--RLEEAMGLIKRAPKGSDHVGMWGALLGACRIHGNMDLA 472
Query: 373 RQ 374
R+
Sbjct: 473 RR 474
>gi|297741272|emb|CBI32403.3| unnamed protein product [Vitis vinifera]
Length = 658
Score = 296 bits (758), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 166/479 (34%), Positives = 262/479 (54%), Gaps = 47/479 (9%)
Query: 227 MLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEAL-TMYRAMLCDGIAP 285
++N +A G V L+R F++IP KDV +W +MI Y+ EA+ Y+ +L I P
Sbjct: 57 LVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRP 116
Query: 286 NDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQF 345
+ ++ ACG + +G +IH K GF F+ A++IH Y+ G +AR F
Sbjct: 117 DFYTFPPVLKACGTLV---DGRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLF 173
Query: 346 ELGIKDHIASWNALIAGFIRNG-------------------------------------- 367
+ + SWNA+I+G I+NG
Sbjct: 174 DDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVFVDMYAKL 233
Query: 368 -MIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAG-VKPNEITMVSV 425
+++ A ++F + +DV SW+ +I+GYAQN + A+E++ M + + PN+ T VS+
Sbjct: 234 GLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSI 293
Query: 426 FCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTT 485
A A G L++G H V+ ++ L+ ++ +ID+Y KCG + A +FY + ++
Sbjct: 294 LPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESS 353
Query: 486 SVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYF 545
WNAII +HG A TLK++ ++ +K + +TF+ +LS C H+G V+ G+ F
Sbjct: 354 VT--WNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCF 411
Query: 546 KSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGN 605
+ M+ Y ++P LKHYGCMVDLLGRAG LE A + I+ MP++ D IWG LL A RIHGN
Sbjct: 412 RLMQE-YGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGACRIHGN 470
Query: 606 VEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
+E+G+ A+ L + + VLLSNIYA+ G+WE +R R+ G+K+ PG+S +
Sbjct: 471 IELGKFASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTI 529
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 128/502 (25%), Positives = 210/502 (41%), Gaps = 107/502 (21%)
Query: 45 IHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDR 104
+H+L+ +G + FI L+NLYA G +S +
Sbjct: 38 LHALLVVAGKVQSIFISTRLVNLYANLGDVSLS--------------------------- 70
Query: 105 LNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVI-PNEVTLASVIS 163
R FD+ P K ++ SMI + N + EA+ F + ++ I P+ T V+
Sbjct: 71 ----RCTFDQIPQKDVYAWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLK 126
Query: 164 SSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVS 223
+ G + + R +H KL V ++ +L++MY ARSLFD+M R++ S
Sbjct: 127 AC---GTLVDGRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGS 183
Query: 224 WNVMLNG---------------------------------------FAKAGLVELARELF 244
WN M++G +AK GL++ A ++F
Sbjct: 184 WNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVFVDMYAKLGLLDSAHKVF 243
Query: 245 ERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAM-LCDGIAPNDVMIVDLISACGRAMAF 303
E IP KDV+SW T+I GY Q SEA+ +Y+ M C I PN V ++ A A
Sbjct: 244 EIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGAL 303
Query: 304 GEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGF 363
+G++IH ++K F+ +I Y CGR
Sbjct: 304 QQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGR-------------------------- 337
Query: 364 IRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMV 423
+ DA LF + + +W+A+IS + + L+LF M+D GVKP+ +T V
Sbjct: 338 -----LVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFV 392
Query: 424 SVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDR 483
S+ A + SG ++EG+W + I + ++D+ + G + A++ F
Sbjct: 393 SLLSACSHSGFVEEGKWCFRLMQEYGIKPSLKHYGCMVDLLGRAGYLEMAYD-FIKDMPL 451
Query: 484 TTSVSPWNAIICGLAMHGDANL 505
S W A++ +HG+ L
Sbjct: 452 QPDASIWGALLGACRIHGNIEL 473
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 109/419 (26%), Positives = 178/419 (42%), Gaps = 111/419 (26%)
Query: 22 YELALVSALR---YCSAHI-----AVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGL 73
Y+L LVS +R Y + + G++IH FK G + N F+ SLI++Y++ G
Sbjct: 106 YQLLLVSEIRPDFYTFPPVLKACGTLVDGRKIHCWAFKLGFQWNVFVAASLIHMYSRFGF 165
Query: 74 ISQAKSMFDSCSTLDPVACNIMISGYIRNDR----------------------------- 104
A+S+FD D + N MISG I+N
Sbjct: 166 TGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPV 225
Query: 105 ----------LNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDM-RILGVIP 153
L+ A +VF+ P+K +S+ ++I G+AQN EA+EV++ M +IP
Sbjct: 226 FVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIP 285
Query: 154 NEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLF 213
N+ T S++ + H+G + + +HG VIK + V ++T L+++Y C LV+A SLF
Sbjct: 286 NQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLF 345
Query: 214 DEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALT 273
++ + + V+WN +++ G E +LF G M+D
Sbjct: 346 YQVPQESSVTWNAIISCHGIHGHAEKTLKLF-----------GEMLD------------- 381
Query: 274 MYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYA 333
+G+ P+ V V L+SAC HS V+ G C+
Sbjct: 382 -------EGVKPDHVTFVSLLSACS-----------HSGFVEEGKWCF------------ 411
Query: 334 ACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ-KRDVYSWSAMI 391
RL E GIK + + ++ R G +E A +M + D W A++
Sbjct: 412 --------RLMQEYGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALL 462
>gi|356518302|ref|XP_003527818.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Glycine max]
Length = 535
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 152/427 (35%), Positives = 249/427 (58%), Gaps = 3/427 (0%)
Query: 237 VELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIA-PNDVMIVDLIS 295
V+ A +F+++ + +V S+ +I Y + A+T++ ML A P+ +I
Sbjct: 55 VDYATMIFQQLENPNVFSYNAIIRTYTHNHKHPLAITVFNQMLTTKSASPDKFTFPFVIK 114
Query: 296 ACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIAS 355
+C + G Q+H+ + K G + + +I Y CG ++ A +E + S
Sbjct: 115 SCAGLLCRRLGQQVHAHVCKFGPKTHAITENALIDMYTKCGDMSGAYQVYEEMTERDAVS 174
Query: 356 WNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGV 415
WN+LI+G +R G ++ AR++F+ M R + SW+ MI+GYA+ AL +F M G+
Sbjct: 175 WNSLISGHVRLGQMKSAREVFDEMPCRTIVSWTTMINGYARGGCYADALGIFREMQVVGI 234
Query: 416 KPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFE 475
+P+EI+++SV A A G L+ G+W H+Y + N + A+++MYAKCG I+ A+
Sbjct: 235 EPDEISVISVLPACAQLGALEVGKWIHKYSEKSGFLKNAGVFNALVEMYAKCGCIDEAWG 294
Query: 476 VFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHA 535
+F + ++ V W+ +I GLA HG ++++ D++K + N +TF+GVLS C HA
Sbjct: 295 LFNQMIEK--DVISWSTMIGGLANHGKGYAAIRVFEDMQKAGVTPNGVTFVGVLSACAHA 352
Query: 536 GLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGT 595
GL + G RYF M+ Y++EP ++HYGC+VDLLGR+GQ+E A + I MPM+ D W +
Sbjct: 353 GLWNEGLRYFDVMRVDYHLEPQIEHYGCLVDLLGRSGQVEQALDTILKMPMQPDSRTWNS 412
Query: 596 LLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGM 655
LL++ RIH N+E+ A + L L+P + VLL+NIYA +WE ++RK +R +
Sbjct: 413 LLSSCRIHHNLEIAVVAMEQLLKLEPEESGNYVLLANIYAKLDKWEGVSNVRKLIRSKRI 472
Query: 656 KRLPGFS 662
K+ PG S
Sbjct: 473 KKTPGCS 479
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 90/309 (29%), Positives = 162/309 (52%), Gaps = 37/309 (11%)
Query: 8 SVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINL 67
+VFN S + ++ C+ + GQQ+H+ + K G +++ +N+LI++
Sbjct: 91 TVFNQMLTTKSASPDKFTFPFVIKSCAGLLCRRLGQQVHAHVCKFGPKTHAITENALIDM 150
Query: 68 YAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMI 127
Y KCG +S A +++ + D V+ N +ISG++R ++ AREVFD+ P + VS+T+MI
Sbjct: 151 YTKCGDMSGAYQVYEEMTERDAVSWNSLISGHVRLGQMKSAREVFDEMPCRTIVSWTTMI 210
Query: 128 MGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMID 187
G+A+ C+ +AL +FR+M+++G+ P+E+++ SV+ + LG + + +H K
Sbjct: 211 NGYARGGCYADALGIFREMQVVGIEPDEISVISVLPACAQLGALEVGKWIHKYSEK---S 267
Query: 188 GFVI---ISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELF 244
GF+ + L+ MY C + EA LF++M E++++SW+ M+ G A G
Sbjct: 268 GFLKNAGVFNALVEMYAKCGCIDEAWGLFNQMIEKDVISWSTMIGGLANHG--------- 318
Query: 245 ERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFG 304
GY A+ ++ M G+ PN V V ++SAC A +
Sbjct: 319 ---------------KGY-------AAIRVFEDMQKAGVTPNGVTFVGVLSACAHAGLWN 356
Query: 305 EGLQIHSII 313
EGL+ ++
Sbjct: 357 EGLRYFDVM 365
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 126/501 (25%), Positives = 210/501 (41%), Gaps = 76/501 (15%)
Query: 21 DYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSM 80
+ E V+ LR C +++ ++IH+ I K L + F+ M
Sbjct: 5 ELENRFVTTLRNCPK---IAELKKIHAHIVKLSLSQSNFL----------------VTKM 45
Query: 81 FDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREAL 140
D C L V MI + N + SY ++I + N A+
Sbjct: 46 LDLCDNLSHVDYATMIFQQLENPNV---------------FSYNAIIRTYTHNHKHPLAI 90
Query: 141 EVFRDM-RILGVIPNEVTLASVISSSVHLGGIWECRML----HGLVIKLMIDGFVIISTN 195
VF M P++ T VI S L CR L H V K I
Sbjct: 91 TVFNQMLTTKSASPDKFTFPFVIKSCAGL----LCRRLGQQVHAHVCKFGPKTHAITENA 146
Query: 196 LLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSW 255
L++MY C + A +++EM ER+ VSWN +++G + G ++ ARE+F+ +P + +VSW
Sbjct: 147 LIDMYTKCGDMSGAYQVYEEMTERDAVSWNSLISGHVRLGQMKSAREVFDEMPCRTIVSW 206
Query: 256 GTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVK 315
TMI+GY + ++AL ++R M GI P+++ ++ ++ AC + A G IH K
Sbjct: 207 TTMINGYARGGCYADALGIFREMQVVGIEPDEISVISVLPACAQLGALEVGKWIHKYSEK 266
Query: 316 AGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQL 375
+GF + ++ YA CG I+ A F I+ + SW+ +I G +G
Sbjct: 267 SGFLKNAGVFNALVEMYAKCGCIDEAWGLFNQMIEKDVISWSTMIGGLANHG-------- 318
Query: 376 FNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTL 435
GYA A+ +F M AGV PN +T V V A A +G
Sbjct: 319 ----------------KGYA-------AIRVFEDMQKAGVTPNGVTFVGVLSACAHAGLW 355
Query: 436 KEG-RWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAII 494
EG R+ ++ + ++D+ + G + A + + + S + WN+++
Sbjct: 356 NEGLRYFDVMRVDYHLEPQIEHYGCLVDLLGRSGQVEQALDTILKMPMQPDSRT-WNSLL 414
Query: 495 CGLAMHGDANLTLKIYSDLEK 515
+H + + + L K
Sbjct: 415 SSCRIHHNLEIAVVAMEQLLK 435
>gi|357111956|ref|XP_003557776.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Brachypodium distachyon]
Length = 747
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 187/624 (29%), Positives = 308/624 (49%), Gaps = 98/624 (15%)
Query: 44 QIHSLIFKSGL-ESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRN 102
Q+H+ + GL + F SL++ Y + G IS+A +FD S D A N M+SG RN
Sbjct: 88 QLHACALRLGLVRPSVFTSGSLVHAYLRFGRISEAYKVFDEMSERDVPAWNAMLSGLCRN 147
Query: 103 DRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVI 162
R EA+ +F M GV + VT++SV+
Sbjct: 148 ARAA-------------------------------EAVGLFGRMVGEGVAGDTVTVSSVL 176
Query: 163 SSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIV 222
V LG ++H +K +D + + L+++Y L EA+ +F M+ R++V
Sbjct: 177 PMCVLLGDQVLALVMHVYAVKHGLDKELFVCNALIDVYGKLGMLEEAQCVFHGMECRDLV 236
Query: 223 SWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDG 282
+WN +++G + G + + AL M++ M G
Sbjct: 237 TWNSIISGCEQRG-------------------------------QTAAALKMFQGMRGSG 265
Query: 283 IAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQA-TIIHFYAACGRINLA 341
++P+ + +V L SA + +H +++ G+D D I I+ YA I A
Sbjct: 266 VSPDVLTLVSLASAIAQGGDGRSAKSLHCYVMRRGWDVDDIIAGNAIVDMYAKLSNIEAA 325
Query: 342 RLQFE-LGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQP 400
+ F+ + ++D + SWN LI G+++NG+ +A + + +MQK +
Sbjct: 326 QRMFDSMPVQDSV-SWNTLITGYMQNGLANEAVERYGHMQKHE----------------- 367
Query: 401 NMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAI 460
G+K + T VSV A + G L++G H + + ++ + +
Sbjct: 368 -------------GLKAIQGTFVSVLPAYSHLGALQQGMRMHALSIKIGLNVDVYVGTCL 414
Query: 461 IDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKL 520
ID+YAKCG + A +F + R+T PWNAII GL +HG L ++S +++ IK
Sbjct: 415 IDLYAKCGKLAEAMLLFEKMPRRST--GPWNAIISGLGVHGHGAEALTLFSRMQQEGIKP 472
Query: 521 NSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEV 580
+ +TF+ +L+ C HAGLVD G +F M+ Y++ P KHY CM D+LGRAGQL++A
Sbjct: 473 DHVTFVSLLAACSHAGLVDQGRSFFDVMQVTYDIVPIAKHYACMADMLGRAGQLDEAFNF 532
Query: 581 IRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRW 640
I++MP+K D +WG LL A RIHGNVE+G+ A+++L L P + VL+SN+YA G+W
Sbjct: 533 IQNMPIKPDSAVWGALLGACRIHGNVEMGKVASQNLFELDPENVGYYVLMSNMYAKVGKW 592
Query: 641 EDAFSIRKEMRDCGMKRLPGFSGV 664
+ +R +R +++ PG+S +
Sbjct: 593 DGVDEVRSLVRRQNLQKTPGWSSI 616
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 91/366 (24%), Positives = 151/366 (41%), Gaps = 92/366 (25%)
Query: 38 AVSQG------QQIHSLIFKSGLESNTFIQ-NSLINLYAKCGLISQAKSMFDSCSTLDPV 90
A++QG + +H + + G + + I N+++++YAK I A+ MFDS D V
Sbjct: 279 AIAQGGDGRSAKSLHCYVMRRGWDVDDIIAGNAIVDMYAKLSNIEAAQRMFDSMPVQDSV 338
Query: 91 ACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILG 150
+ N +I+GY++N N+A E + G Q E L+ +
Sbjct: 339 SWNTLITGYMQNGLANEAVERY----------------GHMQK---HEGLKAIQG----- 374
Query: 151 VIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEAR 210
T SV+ + HLG + + +H L IK+ ++ V + T L+++Y C L EA
Sbjct: 375 ------TFVSVLPAYSHLGALQQGMRMHALSIKIGLNVDVYVGTCLIDLYAKCGKLAEAM 428
Query: 211 SLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSE 270
LF++M R+ WN +++G G +E
Sbjct: 429 LLFEKMPRRSTGPWNAIISGLGVHG-------------------------------HGAE 457
Query: 271 ALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATI-- 328
ALT++ M +GI P+ V V L++AC H+ +V G +D +Q T
Sbjct: 458 ALTLFSRMQQEGIKPDHVTFVSLLAACS-----------HAGLVDQGRSFFDVMQVTYDI 506
Query: 329 --IHFYAAC-----GRINLARLQF----ELGIKDHIASWNALIAGFIRNGMIEDARQLFN 377
I + AC GR F + IK A W AL+ +G +E +
Sbjct: 507 VPIAKHYACMADMLGRAGQLDEAFNFIQNMPIKPDSAVWGALLGACRIHGNVEMGKVASQ 566
Query: 378 NMQKRD 383
N+ + D
Sbjct: 567 NLFELD 572
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 98/231 (42%), Gaps = 41/231 (17%)
Query: 26 LVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCS 85
VS L S A+ QG ++H+L K GL + ++ LI+LYAKCG
Sbjct: 376 FVSVLPAYSHLGALQQGMRMHALSIKIGLNVDVYVGTCLIDLYAKCG------------- 422
Query: 86 TLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRD 145
+L +A +F+K P + + ++I G + EAL +F
Sbjct: 423 ------------------KLAEAMLLFEKMPRRSTGPWNAIISGLGVHGHGAEALTLFSR 464
Query: 146 MRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTN---LLNMYCV 202
M+ G+ P+ VT S++++ H G + + R V+++ D V I+ + + +M
Sbjct: 465 MQQEGIKPDHVTFVSLLAACSHAGLVDQGRSFFD-VMQVTYD-IVPIAKHYACMADMLGR 522
Query: 203 CSSLVEARSLFDEMK-ERNIVSWNVMLNGFAKAGLVELAR----ELFERIP 248
L EA + M + + W +L G VE+ + LFE P
Sbjct: 523 AGQLDEAFNFIQNMPIKPDSAVWGALLGACRIHGNVEMGKVASQNLFELDP 573
>gi|297843364|ref|XP_002889563.1| PDE247 [Arabidopsis lyrata subsp. lyrata]
gi|297335405|gb|EFH65822.1| PDE247 [Arabidopsis lyrata subsp. lyrata]
Length = 500
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 154/420 (36%), Positives = 246/420 (58%), Gaps = 6/420 (1%)
Query: 249 SKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQ 308
S++ VSW + I + RL+EA + M G+ PN + + ++S CG + E L
Sbjct: 33 SENTVSWTSRITLLTRNGRLAEAAKEFSDMRLAGVEPNHITFIAILSGCGDFPSGSEALG 92
Query: 309 --IHSIIVKAGFD-CYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIR 365
+H K G D + + II Y+ GR+ AR F+ + +WN +I G++R
Sbjct: 93 DLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRVKKARCVFDYMEDKNSVTWNTMIDGYMR 152
Query: 366 NGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSV 425
+G +++A ++F+ M +RD+ SW+AMI+G+ AL F M +GVKP+ + +++
Sbjct: 153 SGQVDNAAKMFDKMPERDLISWTAMINGFVNKGFHEEALAWFREMQISGVKPDYVAIIAA 212
Query: 426 FCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTT 485
A + G L G W H YV++ N +S ++ID+Y +CG + A +VF + RT
Sbjct: 213 LNACTNLGALSFGLWVHRYVMSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFDKMEKRT- 271
Query: 486 SVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYF 545
V WN++I G A +G+A+ +L + +++ K +++TF G L+ C H GLV+ G RYF
Sbjct: 272 -VVSWNSVIVGFAANGNAHESLVYFRKMQEERFKPDAVTFTGALTACSHVGLVEEGLRYF 330
Query: 546 KSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGN 605
+ M S Y + P ++HYGC+VDL RAG+LEDA ++++SMPMK + V+ G+LLAA R HGN
Sbjct: 331 QIMISDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACRNHGN 390
Query: 606 VEV-GERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
V E+ K L L + V+LSN+YA G+WE A +R++M+ G+K+ PGFS +
Sbjct: 391 NTVLAEKLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGFSSI 450
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 112/427 (26%), Positives = 201/427 (47%), Gaps = 37/427 (8%)
Query: 101 RNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLAS 160
R N + +++ + VS+TS I +N EA + F DMR+ GV PN +T +
Sbjct: 17 RKRHANPKIQRLNQSTSENTVSWTSRITLLTRNGRLAEAAKEFSDMRLAGVEPNHITFIA 76
Query: 161 VISSSVHLGGIWEC--RMLHGLVIKLMID-GFVIISTNLLNMYCVCSSLVEARSLFDEMK 217
++S E +LHG KL +D V++ T ++ MY + +AR +FD M+
Sbjct: 77 ILSGCGDFPSGSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRVKKARCVFDYME 136
Query: 218 ERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRA 277
++N V+WN M++G+ ++G V+ A ++F+++P +D++SW MI+G++ EAL +R
Sbjct: 137 DKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVNKGFHEEALAWFRE 196
Query: 278 MLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGR 337
M G+ P+ V I+ ++AC A GL +H ++ F + ++I Y CG
Sbjct: 197 MQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVMSQDFKNNVRVSNSLIDLYCRCGC 256
Query: 338 INLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQN 397
+ AR F+ K + SWN++I GF NG ++ F MQ+
Sbjct: 257 VEFARQVFDKMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQE---------------- 300
Query: 398 EQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG-RWAHEYVLNNSITLNDNL 456
E F KP+ +T A + G ++EG R+ + + I+
Sbjct: 301 -------ERF--------KPDAVTFTGALTACSHVGLVEEGLRYFQIMISDYRISPRIEH 345
Query: 457 SAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDAN-LTLKIYSDLEK 515
++D+Y++ G + A ++ + + V +++ HG+ L K+ L
Sbjct: 346 YGCLVDLYSRAGRLEDALKLVQSMPMKPNEVV-IGSLLAACRNHGNNTVLAEKLMKHLTD 404
Query: 516 RNIKLNS 522
N+K +S
Sbjct: 405 LNVKSHS 411
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 93/317 (29%), Positives = 158/317 (49%), Gaps = 55/317 (17%)
Query: 42 GQQIHSLIFKSGLESN-TFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYI 100
G +H K GL+ N + ++I +Y+K G + +A+ +FD + V N MI GY+
Sbjct: 92 GDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRVKKARCVFDYMEDKNSVTWNTMIDGYM 151
Query: 101 RNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLAS 160
R+ ++++A ++FDK P + +S+T+MI GF EAL FR+M+I GV P+ V + +
Sbjct: 152 RSGQVDNAAKMFDKMPERDLISWTAMINGFVNKGFHEEALAWFREMQISGVKPDYVAIIA 211
Query: 161 VISSSVHLG----GIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEM 216
+++ +LG G+W +H V+ V +S +L+++YC C + AR +FD+M
Sbjct: 212 ALNACTNLGALSFGLW----VHRYVMSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFDKM 267
Query: 217 KERNIVSWNVMLNGFA-----------------------------------KAGLVELAR 241
++R +VSWN ++ GFA GLVE
Sbjct: 268 EKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEERFKPDAVTFTGALTACSHVGLVEEGL 327
Query: 242 ELFERIPSKDVVS-----WGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISA 296
F+ + S +S +G ++D Y + RL +AL + ++M + PN+V+I L++A
Sbjct: 328 RYFQIMISDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSM---PMKPNEVVIGSLLAA 384
Query: 297 C---GRAMAFGEGLQIH 310
C G E L H
Sbjct: 385 CRNHGNNTVLAEKLMKH 401
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 107/269 (39%), Gaps = 44/269 (16%)
Query: 374 QLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVF--CAIAS 431
Q N + SW++ I+ +N + A + F M AGV+PN IT +++ C
Sbjct: 26 QRLNQSTSENTVSWTSRITLLTRNGRLAEAAKEFSDMRLAGVEPNHITFIAILSGCGDFP 85
Query: 432 SGTLKEGRWAHEYVLNNSITLNDNL-SAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPW 490
SG+ G H Y + N + AII MY+K G + A VF ++ D+ + W
Sbjct: 86 SGSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRVKKARCVFDYMEDKNSVT--W 143
Query: 491 NAIICGLAMHGDANLTLKIYSDLEKRN-------------------------------IK 519
N +I G G + K++ + +R+ +K
Sbjct: 144 NTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVNKGFHEEALAWFREMQISGVK 203
Query: 520 LNSITFIGVLSTCCHAGLVDLG---ERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLED 576
+ + I L+ C + G + G RY S NV ++DL R G +E
Sbjct: 204 PDYVAIIAALNACTNLGALSFGLWVHRYVMSQDFKNNVRVS----NSLIDLYCRCGCVEF 259
Query: 577 AEEVIRSMPMKADVVIWGTLLAASRIHGN 605
A +V M K VV W +++ +GN
Sbjct: 260 ARQVFDKME-KRTVVSWNSVIVGFAANGN 287
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 88/198 (44%), Gaps = 39/198 (19%)
Query: 21 DYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSM 80
DY +A+++AL C+ A+S G +H + ++N + NSLI+LY +CG + A+ +
Sbjct: 205 DY-VAIIAALNACTNLGALSFGLWVHRYVMSQDFKNNVRVSNSLIDLYCRCGCVEFARQV 263
Query: 81 FDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREAL 140
F DK + VS+ S+I+GFA N E+L
Sbjct: 264 F-------------------------------DKMEKRTVVSWNSVIVGFAANGNAHESL 292
Query: 141 EVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGL-VIKLMIDGFVIISTNLLNM 199
FR M+ P+ VT +++ H+G + E GL ++MI + IS + +
Sbjct: 293 VYFRKMQEERFKPDAVTFTGALTACSHVGLVEE-----GLRYFQIMISDYR-ISPRIEHY 346
Query: 200 YCVCSSLVEARSLFDEMK 217
C+ A L D +K
Sbjct: 347 GCLVDLYSRAGRLEDALK 364
>gi|224103443|ref|XP_002313059.1| predicted protein [Populus trichocarpa]
gi|222849467|gb|EEE87014.1| predicted protein [Populus trichocarpa]
Length = 677
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 195/633 (30%), Positives = 323/633 (51%), Gaps = 21/633 (3%)
Query: 46 HSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRL 105
H KSG N LI+LY+K LI++A+ +FD + + N +IS ++++ L
Sbjct: 11 HVRSIKSGFTLPILTSNQLIHLYSKHCLINEAQKLFDEMPRRNIYSWNTIISAHVKSQNL 70
Query: 106 NDAREVFDKTPIKCCVSYTSMIMGFAQNDCW-REALEVFRDMRI----LGVIPNEVTLAS 160
A+ +FD ++ V+Y SM+ G+A D + R ALE+F +M +GV ++ T+ S
Sbjct: 71 AQAKSIFDSASVRDLVTYNSMLSGYADVDGYERNALELFVEMHSKSNDIGV--DDFTVTS 128
Query: 161 VISSSVHLGGIWECRMLHGLVIKLMID--GFVIISTNLLNMYCVCSSLVEARSLFDEMKE 218
++ L + LH ++K D GFV+ ++L++MY C EA +F ++
Sbjct: 129 MVKLFAKLSNLCYGMQLHSYMVKTGNDRSGFVV--SSLIDMYSKCGCYKEACGIFRGSEK 186
Query: 219 R---NIVSWNVMLNGFAKAGLVELARELFERIPS-KDVVSWGTMIDGYLQVERLSEALTM 274
++VS N M+ + G +E+A LF R D VSW T+I GY+Q EAL +
Sbjct: 187 EGGIDLVSKNAMVAACCREGEMEMALGLFWRENELNDSVSWNTLISGYVQNGYPLEALKL 246
Query: 275 YRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAA 334
+ M +G+ N+ ++SAC G ++H+ I+K G F+++ I+ Y
Sbjct: 247 FVCMGENGVKWNEHTFGSVLSACADLRNLKIGKEMHAWILKNGLSSSAFVESGIVDVYCK 306
Query: 335 CGRINLAR-LQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISG 393
G + A G S ++I G+ G + +A +LF+++++++ W+A+ G
Sbjct: 307 GGNMKYAESFHLTSGTGSSF-SITSMIVGYSSQGNMVEACRLFDSLEEKNSIVWAALFGG 365
Query: 394 YAQNEQPNMALELF-HGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITL 452
Y + Q EL + P+ + +VS A L G+ H YV I +
Sbjct: 366 YVKLNQCEAIFELLCLYIAKEAAIPDALILVSALSVCAFQAALGPGKQIHGYVYRMGIEM 425
Query: 453 NDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSD 512
+ ++ A+IDMY+KCGSI A ++F + +R + +N ++ G A HG + ++ +
Sbjct: 426 DIKMTTAMIDMYSKCGSIPYAEKMFLKVIERDLVL--YNVMVAGYAHHGYEIKAINLFQE 483
Query: 513 LEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAG 572
+ +R + ++ITF+ +LS C H GLVDLGER F SM Y + P+ HY CM+DL GRA
Sbjct: 484 MLERGVGPDAITFVALLSACRHRGLVDLGERTFYSMTEDYLILPETDHYACMIDLYGRAS 543
Query: 573 QLEDAEEVIRSMPMK-ADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLS 631
QLE ++ +P++ D + G A R++ N E+ A + L ++ G V L+
Sbjct: 544 QLEKMVLFMQRIPIEYQDAAVAGAFFNACRLNKNTELAREAEEKLLKIEGDSGARYVQLA 603
Query: 632 NIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
N YA G W + IRKEMR K+ G S V
Sbjct: 604 NAYAAEGNWAEMGRIRKEMRGKEAKKFAGCSWV 636
Score = 136 bits (342), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 107/437 (24%), Positives = 197/437 (45%), Gaps = 41/437 (9%)
Query: 42 GQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCST---LDPVACNIMISG 98
G Q+HS + K+G + + F+ +SLI++Y+KCG +A +F +D V+ N M++
Sbjct: 142 GMQLHSYMVKTGNDRSGFVVSSLIDMYSKCGCYKEACGIFRGSEKEGGIDLVSKNAMVAA 201
Query: 99 YIRNDRLNDAREVF-DKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVT 157
R + A +F + + VS+ ++I G+ QN EAL++F M GV NE T
Sbjct: 202 CCREGEMEMALGLFWRENELNDSVSWNTLISGYVQNGYPLEALKLFVCMGENGVKWNEHT 261
Query: 158 LASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMK 217
SV+S+ L + + +H ++K + + + ++++YC ++ A S
Sbjct: 262 FGSVLSACADLRNLKIGKEMHAWILKNGLSSSAFVESGIVDVYCKGGNMKYAESFHLTSG 321
Query: 218 ERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYL---QVERLSEALTM 274
+ S M+ G++ G + A LF+ + K+ + W + GY+ Q E + E L +
Sbjct: 322 TGSSFSITSMIVGYSSQGNMVEACRLFDSLEEKNSIVWAALFGGYVKLNQCEAIFELLCL 381
Query: 275 YRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAA 334
Y A + P+ +++V +S C A G G QIH + + G + + +I Y+
Sbjct: 382 YIAK--EAAIPDALILVSALSVCAFQAALGPGKQIHGYVYRMGIEMDIKMTTAMIDMYSK 439
Query: 335 CGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGY 394
CG I A F I+ + +N ++AG+ +G
Sbjct: 440 CGSIPYAEKMFLKVIERDLVLYNVMVAGYAHHGY-------------------------- 473
Query: 395 AQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLND 454
A+ LF M++ GV P+ IT V++ A G + G + + + L +
Sbjct: 474 -----EIKAINLFQEMLERGVGPDAITFVALLSACRHRGLVDLGERTFYSMTEDYLILPE 528
Query: 455 -NLSAAIIDMYAKCGSI 470
+ A +ID+Y + +
Sbjct: 529 TDHYACMIDLYGRASQL 545
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 121/235 (51%), Gaps = 9/235 (3%)
Query: 28 SALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTL 87
S L C+ + G+++H+ I K+GL S+ F+++ ++++Y K G + A+S + T
Sbjct: 264 SVLSACADLRNLKIGKEMHAWILKNGLSSSAFVESGIVDVYCKGGNMKYAESFHLTSGTG 323
Query: 88 DPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQ-NDCWREALEVFRDM 146
+ MI GY + +A +FD K + + ++ G+ + N C EA+ +
Sbjct: 324 SSFSITSMIVGYSSQGNMVEACRLFDSLEEKNSIVWAALFGGYVKLNQC--EAIFELLCL 381
Query: 147 RIL--GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCS 204
I IP+ + L S +S + + +HG V ++ I+ + ++T +++MY C
Sbjct: 382 YIAKEAAIPDALILVSALSVCAFQAALGPGKQIHGYVYRMGIEMDIKMTTAMIDMYSKCG 441
Query: 205 SLVEARSLFDEMKERNIVSWNVMLNGFAKAGL----VELARELFERIPSKDVVSW 255
S+ A +F ++ ER++V +NVM+ G+A G + L +E+ ER D +++
Sbjct: 442 SIPYAEKMFLKVIERDLVLYNVMVAGYAHHGYEIKAINLFQEMLERGVGPDAITF 496
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 118/267 (44%), Gaps = 44/267 (16%)
Query: 306 GLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIR 365
GL H +K+GF +IH Y+ IN A+ F+ + +I SWN +I+ ++
Sbjct: 7 GLIHHVRSIKSGFTLPILTSNQLIHLYSKHCLINEAQKLFDEMPRRNIYSWNTIISAHVK 66
Query: 366 NGMIEDARQLFNNMQKRDVYSWSAMISGYAQ-NEQPNMALELFHGMVDAGVKPNEI---- 420
+ + A+ +F++ RD+ ++++M+SGYA + ALELF V+ K N+I
Sbjct: 67 SQNLAQAKSIFDSASVRDLVTYNSMLSGYADVDGYERNALELF---VEMHSKSNDIGVDD 123
Query: 421 -TMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKC------------ 467
T+ S+ A L G H Y++ + + +++IDMY+KC
Sbjct: 124 FTVTSMVKLFAKLSNLCYGMQLHSYMVKTGNDRSGFVVSSLIDMYSKCGCYKEACGIFRG 183
Query: 468 ----------------------GSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANL 505
G + A +F+ + SVS WN +I G +G
Sbjct: 184 SEKEGGIDLVSKNAMVAACCREGEMEMALGLFWRENELNDSVS-WNTLISGYVQNGYPLE 242
Query: 506 TLKIYSDLEKRNIKLNSITFIGVLSTC 532
LK++ + + +K N TF VLS C
Sbjct: 243 ALKLFVCMGENGVKWNEHTFGSVLSAC 269
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 70/146 (47%), Gaps = 31/146 (21%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
L LVSAL C+ A+ G+QIH +++ G+E + + ++I++Y+KCG I A+ MF
Sbjct: 393 LILVSALSVCAFQAALGPGKQIHGYVYRMGIEMDIKMTTAMIDMYSKCGSIPYAEKMFLK 452
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
D V N+M++GY A + +A+ +F
Sbjct: 453 VIERDLVLYNVMVAGY-------------------------------AHHGYEIKAINLF 481
Query: 144 RDMRILGVIPNEVTLASVISSSVHLG 169
++M GV P+ +T +++S+ H G
Sbjct: 482 QEMLERGVGPDAITFVALLSACRHRG 507
>gi|222629009|gb|EEE61141.1| hypothetical protein OsJ_15084 [Oryza sativa Japonica Group]
Length = 897
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 208/677 (30%), Positives = 339/677 (50%), Gaps = 85/677 (12%)
Query: 38 AVSQGQQIHSLIFKSGL---ESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNI 94
A+ G +H+ + GL + + + +SL+ +YA+CG +
Sbjct: 122 ALPVGAAVHAYSVRFGLLEGDGSVAVASSLVYMYARCGSV-------------------- 161
Query: 95 MISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREAL----EVFRDMRILG 150
DA +FD+ P + V++T++I G N E L + R G
Sbjct: 162 -----------RDAVRLFDEMPERDVVAWTAVISGCVCNGQCGEGLSYLVRMVRSAGDGG 210
Query: 151 VIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEAR 210
PN T+ S + + LG + LHG +K + + ++L +MY C S +AR
Sbjct: 211 ARPNSRTMESGLEACGVLGELSVGTCLHGFGVKAGVGHCPSVVSSLFSMYTKCDSTEDAR 270
Query: 211 SLFDEMKERNIVSWNVMLNGFAKAGLVELARELF----ERIPSKDVVSWGTMIDGYLQVE 266
LF E+ E+++VSW ++ + +AG E A ELF E D V ++ G
Sbjct: 271 ILFPELPEKDLVSWTSLIGAYCRAGHAEKAVELFLGMEESGLQPDEVVISCLLAGLGNDA 330
Query: 267 RLSEALTMYRAML----CDGIAPNDVMI--------VDLISACGRAMAFGEGLQIHSIIV 314
++ T + A++ D + + +I VD+ + R + + S++V
Sbjct: 331 KVRGGKTFHAAIVRRNFGDSVLIGNALISMYAKCKQVDIAATVFRMLHQRDTDSWSSMVV 390
Query: 315 ---KAGFD--CYDFIQ-----------------ATIIHFYAACGRINLARLQFELGIKDH 352
KAG D C + + +II + GR+ L + IK H
Sbjct: 391 AYCKAGLDLKCLELYREMQFRDKDEFEYDTNSLISIISSCSRLGRLRLGQSAHCYSIK-H 449
Query: 353 IAS-----WNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELF 407
+A NALI+ + R G + AR++F ++ +DV +WSA+IS Y+ AL L+
Sbjct: 450 LAGENSSVANALISMYGRCGNFDVARKIFGMVKTKDVVTWSALISSYSHLGHSKDALLLY 509
Query: 408 HGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKC 467
M+ GVKPN T+VSV + A+ L+ G H +V + + + ++ A++DMY KC
Sbjct: 510 DQMLTEGVKPNSATLVSVISSCANLAALEHGELIHSHVKDVGLECDLSICTALVDMYMKC 569
Query: 468 GSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIG 527
G + A ++F + +R V WN +I G MHG+A LK++S +E+ N+K NS+TF+
Sbjct: 570 GQLGIARKMFDSMLER--DVVTWNVMISGYGMHGEAIQALKLFSMMERGNVKPNSLTFLA 627
Query: 528 VLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMK 587
+LS CCHAGLVD G F M+ Y++EP+LKHY CMVDLLG++G L++AE+V+ +MP++
Sbjct: 628 ILSACCHAGLVDKGRELFTRMEE-YSLEPNLKHYACMVDLLGKSGHLQEAEDVVSAMPIE 686
Query: 588 ADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIR 647
D IWGTLL A ++H N E+G R AK P + +L+SN Y A +W + +R
Sbjct: 687 PDGGIWGTLLGACKMHDNFEMGLRVAKKAFASDPENDGYYILMSNSYGSAEKWNEIEKLR 746
Query: 648 KEMRDCGMKRLPGFSGV 664
M++ G+++ G+S +
Sbjct: 747 DMMKNHGVEKSIGWSTI 763
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 109/472 (23%), Positives = 198/472 (41%), Gaps = 80/472 (16%)
Query: 140 LEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMI---DGFVIISTNL 196
L R MR G P+ T V S++ LG + +H ++ + DG V ++++L
Sbjct: 92 LSAHRRMRASGARPSRFTAPLVASAAAELGALPVGAAVHAYSVRFGLLEGDGSVAVASSL 151
Query: 197 LNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWG 256
+ MY C G V A LF+ +P +DVV+W
Sbjct: 152 VYMYARC-------------------------------GSVRDAVRLFDEMPERDVVAWT 180
Query: 257 TMIDGYLQVERLSEALT----MYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSI 312
+I G + + E L+ M R+ G PN + + ACG G +H
Sbjct: 181 AVISGCVCNGQCGEGLSYLVRMVRSAGDGGARPNSRTMESGLEACGVLGELSVGTCLHGF 240
Query: 313 IVKAGFDCYDFIQATIIHFYAACGRINLARLQF-ELGIKDHIASWNALIAGFIRNGMIED 371
VKAG + +++ Y C AR+ F EL KD + SW +LI + R G E
Sbjct: 241 GVKAGVGHCPSVVSSLFSMYTKCDSTEDARILFPELPEKD-LVSWTSLIGAYCRAGHAEK 299
Query: 372 ARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIAS 431
A+ELF GM ++G++P+E+ + + + +
Sbjct: 300 -------------------------------AVELFLGMEESGLQPDEVVISCLLAGLGN 328
Query: 432 SGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWN 491
++ G+ H ++ + + + A+I MYAKC ++ A VF + R T W+
Sbjct: 329 DAKVRGGKTFHAAIVRRNFGDSVLIGNALISMYAKCKQVDIAATVFRMLHQRDT--DSWS 386
Query: 492 AIICGLAMHGDANLTLKIYSDLEKRN---IKLNSITFIGVLSTCCHAGLVDLGER-YFKS 547
+++ G L++Y +++ R+ + ++ + I ++S+C G + LG+ + S
Sbjct: 387 SMVVAYCKAGLDLKCLELYREMQFRDKDEFEYDTNSLISIISSCSRLGRLRLGQSAHCYS 446
Query: 548 MKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAA 599
+K + + + ++ + GR G + A ++ M DVV W L+++
Sbjct: 447 IKHLAGENSSVAN--ALISMYGRCGNFDVARKIF-GMVKTKDVVTWSALISS 495
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 95/391 (24%), Positives = 160/391 (40%), Gaps = 92/391 (23%)
Query: 42 GQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIR 101
GQ H K N+ + N+LI++Y +CG
Sbjct: 439 GQSAHCYSIKHLAGENSSVANALISMYGRCG----------------------------- 469
Query: 102 NDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASV 161
+ AR++F K V+++++I ++ ++AL ++ M GV PN TL SV
Sbjct: 470 --NFDVARKIFGMVKTKDVVTWSALISSYSHLGHSKDALLLYDQMLTEGVKPNSATLVSV 527
Query: 162 ISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNI 221
ISS +L + ++H V + ++ + I T L++MY C L AR +FD M ER++
Sbjct: 528 ISSCANLAALEHGELIHSHVKDVGLECDLSICTALVDMYMKCGQLGIARKMFDSMLERDV 587
Query: 222 VSWNVMLNGFA-----------------------------------KAGLVELARELFER 246
V+WNVM++G+ AGLV+ RELF R
Sbjct: 588 VTWNVMISGYGMHGEAIQALKLFSMMERGNVKPNSLTFLAILSACCHAGLVDKGRELFTR 647
Query: 247 IP----SKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMA 302
+ ++ + M+D + L EA + AM I P+ + L+ AC
Sbjct: 648 MEEYSLEPNLKHYACMVDLLGKSGHLQEAEDVVSAM---PIEPDGGIWGTLLGACKMHDN 704
Query: 303 FGEGLQIHSIIVKAGF------DCYDFIQATIIHFYAACGRIN----LARLQFELGIKDH 352
F GL+ + K F D Y + + + Y + + N L + G++
Sbjct: 705 FEMGLR----VAKKAFASDPENDGYYILMS---NSYGSAEKWNEIEKLRDMMKNHGVEKS 757
Query: 353 IASWNAL-IAGFIRNGMIEDARQLFNNMQKR 382
I W+ + I GF++N + + LF + R
Sbjct: 758 IG-WSTIDICGFMKNQLTQWQHSLFEQSEFR 787
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/359 (18%), Positives = 138/359 (38%), Gaps = 42/359 (11%)
Query: 248 PSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGL 307
P D W +++ + + L+ +R M G P+ + SA A G
Sbjct: 68 PCPDAFLWNSLLRSRHRASDFASTLSAHRRMRASGARPSRFTAPLVASAAAELGALPVGA 127
Query: 308 QIHSIIVKAGF---DCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFI 364
+H+ V+ G D + +++++ YA CG + A F+ + + +W A+I+G +
Sbjct: 128 AVHAYSVRFGLLEGDGSVAVASSLVYMYARCGSVRDAVRLFDEMPERDVVAWTAVISGCV 187
Query: 365 RNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVS 424
NG E + + + D G +PN TM S
Sbjct: 188 CNGQC---------------------------GEGLSYLVRMVRSAGDGGARPNSRTMES 220
Query: 425 VFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRT 484
A G L G H + + + ++ +++ MY KC S A +F + ++
Sbjct: 221 GLEACGVLGELSVGTCLHGFGVKAGVGHCPSVVSSLFSMYTKCDSTEDARILFPELPEK- 279
Query: 485 TSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVD----L 540
+ W ++I G A ++++ +E+ ++ + + +C AGL +
Sbjct: 280 -DLVSWTSLIGAYCRAGHAEKAVELFLGMEESGLQPDEVVI-----SCLLAGLGNDAKVR 333
Query: 541 GERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAA 599
G + F + N + ++ + + Q++ A V R M + D W +++ A
Sbjct: 334 GGKTFHAAIVRRNFGDSVLIGNALISMYAKCKQVDIAATVFR-MLHQRDTDSWSSMVVA 391
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 111/263 (42%), Gaps = 45/263 (17%)
Query: 26 LVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCS 85
LVS + C+ A+ G+ IHS + GLE + I +L+++Y KCG + A+ MFDS
Sbjct: 524 LVSVISSCANLAALEHGELIHSHVKDVGLECDLSICTALVDMYMKCGQLGIARKMFDSML 583
Query: 86 TLDPVACNIMISGYIRNDRLNDAREVF---DKTPIKC-CVSYTSMIMGFAQNDCWREALE 141
D V N+MISGY + A ++F ++ +K +++ +++ + E
Sbjct: 584 ERDVVTWNVMISGYGMHGEAIQALKLFSMMERGNVKPNSLTFLAILSACCHAGLVDKGRE 643
Query: 142 VFRDMRILGVIPN---EVTLASVISSSVHL---------------GGIW-----ECRMLH 178
+F M + PN + ++ S HL GGIW C+M
Sbjct: 644 LFTRMEEYSLEPNLKHYACMVDLLGKSGHLQEAEDVVSAMPIEPDGGIWGTLLGACKMHD 703
Query: 179 GLVIKLMI-----------DGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNI---VSW 224
+ L + DG+ I+ + N Y E L D MK + + W
Sbjct: 704 NFEMGLRVAKKAFASDPENDGYYIL---MSNSYGSAEKWNEIEKLRDMMKNHGVEKSIGW 760
Query: 225 NVM-LNGFAKAGLVELARELFER 246
+ + + GF K L + LFE+
Sbjct: 761 STIDICGFMKNQLTQWQHSLFEQ 783
>gi|79329389|ref|NP_001031987.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171830|sp|Q9FND7.1|PP410_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g40405
gi|10178152|dbj|BAB11597.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332007161|gb|AED94544.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 612
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 154/449 (34%), Positives = 255/449 (56%), Gaps = 4/449 (0%)
Query: 216 MKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMY 275
+K+ ++V V + ++ A ++ +R + + +MI + + ++ Y
Sbjct: 35 LKDDHLVGHFVKAVALSDHKYLDYANQILDRSEKPTLFALNSMIRAHCKSPVPEKSFDFY 94
Query: 276 RAMLCDG--IAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYA 333
R +L G + P++ + L+ AC GLQ+H + ++ GFD +Q +I YA
Sbjct: 95 RRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYA 154
Query: 334 ACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISG 393
G ++ F A++ R G + AR+LF M +RD +W+AMISG
Sbjct: 155 ELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISG 214
Query: 394 YAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLN 453
YAQ + AL +FH M GVK N + M+SV A G L +GRWAH Y+ N I +
Sbjct: 215 YAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKIT 274
Query: 454 DNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDL 513
L+ ++D+YAKCG + A EVF+ + ++ +V W++ + GLAM+G L+++S +
Sbjct: 275 VRLATTLVDLYAKCGDMEKAMEVFWGMEEK--NVYTWSSALNGLAMNGFGEKCLELFSLM 332
Query: 514 EKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQ 573
++ + N++TF+ VL C G VD G+R+F SM++ + +EP L+HYGC+VDL RAG+
Sbjct: 333 KQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGR 392
Query: 574 LEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNI 633
LEDA +I+ MPMK +W +LL ASR++ N+E+G A+K + L+ ++ + VLLSNI
Sbjct: 393 LEDAVSIIQQMPMKPHAAVWSSLLHASRMYKNLELGVLASKKMLELETANHGAYVLLSNI 452
Query: 634 YADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
YAD+ W++ +R+ M+ G+++ PG S
Sbjct: 453 YADSNDWDNVSHVRQSMKSKGVRKQPGCS 481
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 99/407 (24%), Positives = 182/407 (44%), Gaps = 41/407 (10%)
Query: 105 LNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILG----VIPNEVTLAS 160
L+ A ++ D++ + SMI ++ ++ + +R RIL + P+ T+
Sbjct: 56 LDYANQILDRSEKPTLFALNSMIRAHCKSPVPEKSFDFYR--RILSSGNDLKPDNYTVNF 113
Query: 161 VISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERN 220
++ + L +HG+ I+ D + T L+++Y L +F+ + +
Sbjct: 114 LVQACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPD 173
Query: 221 IVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLC 280
V M+ A+ G V AR+LFE +P +D ++W MI GY QV EAL ++ M
Sbjct: 174 FVCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQL 233
Query: 281 DGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINL 340
+G+ N V ++ ++SAC + A +G HS I + + T++ YA CG
Sbjct: 234 EGVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGD--- 290
Query: 341 ARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQP 400
+E A ++F M++++VY+WS+ ++G A N
Sbjct: 291 ----------------------------MEKAMEVFWGMEEKNVYTWSSALNGLAMNGFG 322
Query: 401 NMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLS--A 458
LELF M GV PN +T VSV + G + EG+ H + N + L
Sbjct: 323 EKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQ-RHFDSMRNEFGIEPQLEHYG 381
Query: 459 AIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANL 505
++D+YA+ G + A + + + + + W++++ M+ + L
Sbjct: 382 CLVDLYARAGRLEDAVSIIQQMPMKPHA-AVWSSLLHASRMYKNLEL 427
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 93/358 (25%), Positives = 165/358 (46%), Gaps = 37/358 (10%)
Query: 6 FHSVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLI 65
F+ S +L+ +Y + + ++ C+ G Q+H + + G +++ +Q LI
Sbjct: 93 FYRRILSSGNDLKPDNYTVNFL--VQACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLI 150
Query: 66 NLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTS 125
+LYA+ G + +F+S D V M++ R + AR++F+ P + +++ +
Sbjct: 151 SLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNA 210
Query: 126 MIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLM 185
MI G+AQ REAL VF M++ GV N V + SV+S+ LG + + R H + +
Sbjct: 211 MISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNK 270
Query: 186 IDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFE 245
I V ++T L+++Y C + +A +F M+E+N+ +W+ LNG A G E ELF
Sbjct: 271 IKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFS 330
Query: 246 RIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGE 305
M DG+ PN V V ++ C E
Sbjct: 331 -------------------------------LMKQDGVTPNAVTFVSVLRGCSVVGFVDE 359
Query: 306 GLQIHSIIVKAGFDCYDFIQ--ATIIHFYAACGRINLA-RLQFELGIKDHIASWNALI 360
G Q H ++ F ++ ++ YA GR+ A + ++ +K H A W++L+
Sbjct: 360 G-QRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLL 416
>gi|357112489|ref|XP_003558041.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Brachypodium distachyon]
Length = 706
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 194/580 (33%), Positives = 289/580 (49%), Gaps = 30/580 (5%)
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDM--R 147
VA N I+ +R + AR FD P++ SY ++I G+ +N AL +F M R
Sbjct: 18 VAANARIAWLVRAGNIEGARAAFDAMPLRTTASYNALIAGYFRNHLPDAALGLFHRMPSR 77
Query: 148 ILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLV 207
LG + S+ ++ + + + V+ T+LL Y L
Sbjct: 78 DLGSYNALIAGLSLRRHTLPDAA--------AALASIPLPPSVVSFTSLLRGYVRHGLLA 129
Query: 208 EARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVER 267
+A LF +M ERN V++ V+L GF AG V AR+LF+ +P KDVV+ M+ GY Q R
Sbjct: 130 DAIRLFHQMPERNHVTYTVLLGGFLDAGRVNEARKLFDEMPDKDVVARTAMLSGYCQAGR 189
Query: 268 LSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGF----DCYDF 323
++EA ++ M + MI G I+ + F D +
Sbjct: 190 ITEARALFDEMPKRNVVSWTAMIS------------GYAQNGKVILARKLFEVMPDRNEV 237
Query: 324 IQATIIHFYAACGRINLARLQFELGIKDH-IASWNALIAGFIRNGMIEDARQLFNNMQKR 382
++ Y G + A F + DH +A+ NA++ GF ++GM++ A+ +F M R
Sbjct: 238 SWTAMLVGYIQAGHVEDAEDLFN-AMPDHPVAACNAMMVGFGQHGMVDAAKAMFERMCAR 296
Query: 383 DVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAH 442
D +WSAMI Y QNE AL F M+ G++PN + +S+ A+ T GR H
Sbjct: 297 DDGTWSAMIKVYEQNEFLMEALSTFREMLCRGIRPNYTSFISILTVCAALATADYGRELH 356
Query: 443 EYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGD 502
+L S + +A+I MY KCG+++ A VF + V WN++I G A HG
Sbjct: 357 AAMLRCSFDTDVFAVSALITMYIKCGNLDKAKRVFNMFEPK--DVVMWNSMITGYAQHGL 414
Query: 503 ANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYG 562
L I+ DL + + IT+IGVL+ C + G V G F SM ++ HY
Sbjct: 415 GEEALGIFDDLRLARMAPDGITYIGVLTACSYTGKVKEGREIFNSMGMNSSIRLGAAHYS 474
Query: 563 CMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPS 622
CMVDLLGRAG +++A ++I +MP++ D +IWG L+ A R+H N E+ E AAK L L+P
Sbjct: 475 CMVDLLGRAGLVDEALDLINNMPVEPDAIIWGALMGACRMHKNAEIAEVAAKKLLELEPG 534
Query: 623 HGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
VLLS+IY GRWEDA +RK + + + PG S
Sbjct: 535 SAGPYVLLSHIYTSTGRWEDASDMRKFISSRNLNKSPGCS 574
Score = 175 bits (444), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 114/446 (25%), Positives = 217/446 (48%), Gaps = 41/446 (9%)
Query: 62 NSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCV 121
SL+ Y + GL++ A +F + V +++ G++ R+N+AR++FD+ P K V
Sbjct: 116 TSLLRGYVRHGLLADAIRLFHQMPERNHVTYTVLLGGFLDAGRVNEARKLFDEMPDKDVV 175
Query: 122 SYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLV 181
+ T+M+ G+ Q EA +F +M V V+ ++IS G + R L
Sbjct: 176 ARTAMLSGYCQAGRITEARALFDEMPKRNV----VSWTAMISGYAQNGKVILARKL---- 227
Query: 182 IKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELAR 241
++M D + T +L Y + +A LF+ M + + + N M+ GF + G+V+ A+
Sbjct: 228 FEVMPDRNEVSWTAMLVGYIQAGHVEDAEDLFNAMPDHPVAACNAMMVGFGQHGMVDAAK 287
Query: 242 ELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAM 301
+FER+ ++D +W MI Y Q E L EAL+ +R MLC GI PN + +++ C
Sbjct: 288 AMFERMCARDDGTWSAMIKVYEQNEFLMEALSTFREMLCRGIRPNYTSFISILTVCAALA 347
Query: 302 AFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIA 361
G ++H+ +++ FD F + +I Y CG ++ A+ F + + WN++I
Sbjct: 348 TADYGRELHAAMLRCSFDTDVFAVSALITMYIKCGNLDKAKRVFNMFEPKDVVMWNSMIT 407
Query: 362 GFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEIT 421
G+ ++G+ E+A +F++++ A + P+ IT
Sbjct: 408 GYAQHGLGEEALGIFDDLRL-------------------------------ARMAPDGIT 436
Query: 422 MVSVFCAIASSGTLKEGRWAHEYV-LNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHI 480
+ V A + +G +KEGR + +N+SI L + ++D+ + G ++ A ++ ++
Sbjct: 437 YIGVLTACSYTGKVKEGREIFNSMGMNSSIRLGAAHYSCMVDLLGRAGLVDEALDLINNM 496
Query: 481 RDRTTSVSPWNAIICGLAMHGDANLT 506
++ W A++ MH +A +
Sbjct: 497 PVEPDAII-WGALMGACRMHKNAEIA 521
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 97/236 (41%), Gaps = 62/236 (26%)
Query: 25 ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSC 84
+ +S L C+A G+++H+ + + +++ F ++LI +Y KCG + +AK +F+
Sbjct: 335 SFISILTVCAALATADYGRELHAAMLRCSFDTDVFAVSALITMYIKCGNLDKAKRVFNMF 394
Query: 85 STLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFR 144
D V N MI+GY AQ+ EAL +F
Sbjct: 395 EPKDVVMWNSMITGY-------------------------------AQHGLGEEALGIFD 423
Query: 145 DMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCS 204
D+R+ + P+ +T V+++ + G + E R + N + S
Sbjct: 424 DLRLARMAPDGITYIGVLTACSYTGKVKEGR-------------------EIFNSMGMNS 464
Query: 205 SLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIP-SKDVVSWGTMI 259
S+ ++ M++ +AGLV+ A +L +P D + WG ++
Sbjct: 465 SI-----------RLGAAHYSCMVDLLGRAGLVDEALDLINNMPVEPDAIIWGALM 509
>gi|413935694|gb|AFW70245.1| hypothetical protein ZEAMMB73_875976 [Zea mays]
Length = 807
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 194/684 (28%), Positives = 316/684 (46%), Gaps = 107/684 (15%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
L S L C A A+ G++ H L K GL+ + F++N L+ +Y KCG ++
Sbjct: 143 FTLASVLSACGAVAALDDGRRCHGLAVKVGLDGHQFVENGLLGMYTKCGSVA-------- 194
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
DA +FD P VS+T+M+ G AQ +AL +F
Sbjct: 195 -----------------------DAVRLFDGMPSPNEVSFTAMMGGLAQGGAVDDALRLF 231
Query: 144 RDMRILGVIPNEVTLASVISSSVHL--------GGIWECRMLHGLVIKLMIDGFVIISTN 195
M G+ + V ++SV+ + I + +H LV++ + +
Sbjct: 232 ARMSRTGIRVDPVAVSSVLGACAQACAGDYNVARAIQLAQSIHALVVRKGFGSDQHVGNS 291
Query: 196 LLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELA--------------- 240
L+++Y + EA +F+ + +IVSWN+++ G+ + G E A
Sbjct: 292 LVDLYAKGMKMDEAIKVFESLSSVSIVSWNILITGYGQLGCYERAMEVLEFMQESGFEPN 351
Query: 241 --------------------RELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLC 280
R +F++IP V +W T++ GY Q E E + ++R M
Sbjct: 352 EVTYSNMLASCIKARDVPSARAMFDKIPKPSVTTWNTLLSGYGQEELHQETIDLFRRMQH 411
Query: 281 DGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINL 340
+ P+ + ++S+C R F G Q+HS V+ F+ + +I Y+ CG++ +
Sbjct: 412 QNVQPDRTTLAVILSSCSRLGNFELGKQVHSASVRLLLHNDMFVASGLIDIYSKCGQVGI 471
Query: 341 ARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQP 400
A + +FN M +RDV W++MISG A +
Sbjct: 472 ALI-------------------------------IFNMMTERDVVCWNSMISGLAIHSLS 500
Query: 401 NMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAI 460
A + M + G+ P E + S+ A ++ +GR H VL + N + ++
Sbjct: 501 EEAFDFLKQMRENGMFPTESSYASMINLCARLSSIPQGRQMHAQVLKDGYDQNVYVGCSL 560
Query: 461 IDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKL 520
IDMYAK G+++ A +F++ V+ WN +I G A +G ++++ + K
Sbjct: 561 IDMYAKSGNMDDA-RLFFNCMIVKNLVA-WNEMIHGYAQNGFGEKAVELFEYMLTTKQKP 618
Query: 521 NSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEV 580
+S+TFI VL+ C H+GLVD +F SM+S Y + P ++HY C++D L RA + + E V
Sbjct: 619 DSVTFIAVLTGCSHSGLVDEAVTFFNSMESNYGITPLVEHYTCLIDALARAARFAEVEAV 678
Query: 581 IRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRW 640
I MP K D ++W LLAA +H N E+GE +AK L L P + VLLSNIYA GR
Sbjct: 679 IGKMPYKDDPILWEVLLAACVVHHNAELGEFSAKHLFRLDPKNPSPYVLLSNIYATLGRH 738
Query: 641 EDAFSIRKEMRDCGMKRLPGFSGV 664
DA ++R M G+ + G+S V
Sbjct: 739 GDASAVRALMSSRGVVKGRGYSWV 762
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 153/622 (24%), Positives = 276/622 (44%), Gaps = 89/622 (14%)
Query: 40 SQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGY 99
S + H+ + +GL ++TF+ N L+ LY+ GL A F + + + N IS
Sbjct: 27 SNAKAAHARVLAAGLAADTFLLNRLVELYSLSGLPCHALRAFRALPHPNVYSYNAAISAA 86
Query: 100 IRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLA 159
R L AR++ + P + VS+ ++I A++ EALE+++ M G+ P TLA
Sbjct: 87 CRAGDLAAARDLLGRMPDRNAVSWNTVIAAVARSGSPGEALEMYQGMLQEGLAPTNFTLA 146
Query: 160 SVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKER 219
SV+S+ + + + R HGL +K+ +DG + LL MY C S+ +A LFD M
Sbjct: 147 SVLSACGAVAALDDGRRCHGLAVKVGLDGHQFVENGLLGMYTKCGSVADAVRLFDGMPSP 206
Query: 220 NIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAML 279
N VS+ M+ G A+ G V+ A LF R+
Sbjct: 207 NEVSFTAMMGGLAQGGAVDDALRLFARMSRT----------------------------- 237
Query: 280 CDGIAPNDVMIVDLISACGRAMA----FGEGLQ----IHSIIVKAGFDCYDFIQATIIHF 331
GI + V + ++ AC +A A +Q IH+++V+ GF + +++
Sbjct: 238 --GIRVDPVAVSSVLGACAQACAGDYNVARAIQLAQSIHALVVRKGFGSDQHVGNSLVDL 295
Query: 332 YAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIE--------------------- 370
YA +++ A FE I SWN LI G+ + G E
Sbjct: 296 YAKGMKMDEAIKVFESLSSVSIVSWNILITGYGQLGCYERAMEVLEFMQESGFEPNEVTY 355
Query: 371 --------------DARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVK 416
AR +F+ + K V +W+ ++SGY Q E ++LF M V+
Sbjct: 356 SNMLASCIKARDVPSARAMFDKIPKPSVTTWNTLLSGYGQEELHQETIDLFRRMQHQNVQ 415
Query: 417 PNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEV 476
P+ T+ + + + G + G+ H + + + +++ +ID+Y+KCG + A +
Sbjct: 416 PDRTTLAVILSSCSRLGNFELGKQVHSASVRLLLHNDMFVASGLIDIYSKCGQVGIALII 475
Query: 477 FYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAG 536
F + +R V WN++I GLA+H + + + + ++ +++ C
Sbjct: 476 FNMMTER--DVVCWNSMISGLAIHSLSEEAFDFLKQMRENGMFPTESSYASMINLCARLS 533
Query: 537 LVDLGER-YFKSMKSVYNVEPDLKHYGC-MVDLLGRAGQLEDAEEVIRSMPMKADVVIWG 594
+ G + + + +K Y+ + GC ++D+ ++G ++DA M +K ++V W
Sbjct: 534 SIPQGRQMHAQVLKDGYDQN---VYVGCSLIDMYAKSGNMDDARLFFNCMIVK-NLVAWN 589
Query: 595 TLLAASRIHGNVE--VGERAAK 614
+ IHG + GE+A +
Sbjct: 590 EM-----IHGYAQNGFGEKAVE 606
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 70/136 (51%), Gaps = 5/136 (3%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E + S + C+ ++ QG+Q+H+ + K G + N ++ SLI++YAK G + A+ F+
Sbjct: 519 ESSYASMINLCARLSSIPQGRQMHAQVLKDGYDQNVYVGCSLIDMYAKSGNMDDARLFFN 578
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFD---KTPIKC-CVSYTSMIMGFAQNDCWRE 138
+ VA N MI GY +N A E+F+ T K V++ +++ G + + E
Sbjct: 579 CMIVKNLVAWNEMIHGYAQNGFGEKAVELFEYMLTTKQKPDSVTFIAVLTGCSHSGLVDE 638
Query: 139 ALEVFRDMRI-LGVIP 153
A+ F M G+ P
Sbjct: 639 AVTFFNSMESNYGITP 654
>gi|297820538|ref|XP_002878152.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
lyrata]
gi|297323990|gb|EFH54411.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
lyrata]
Length = 886
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 186/626 (29%), Positives = 311/626 (49%), Gaps = 88/626 (14%)
Query: 42 GQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIR 101
G+Q+H+ + G E N+FI N+L+ +Y K G ++ +K + S D V N ++S
Sbjct: 217 GKQVHAYGLRKG-ELNSFIINTLVAMYGKMGKLASSKVLLGSFEGRDLVTWNTVLSS--- 272
Query: 102 NDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASV 161
QN+ + EALE R+M + GV P+ T++SV
Sbjct: 273 ----------------------------LCQNEQFLEALEYLREMVLEGVEPDGFTISSV 304
Query: 162 ISSSVHLGGIWECRMLHGLVIKL-MIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERN 220
+ + HL + + LH +K +D + + L++MYC C ++ +FD M +R
Sbjct: 305 LPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGCRVFDGMFDRK 364
Query: 221 IVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAM-L 279
I WN M+ G+A Q E EAL ++ M
Sbjct: 365 IGLWNAMITGYA-------------------------------QNEYDEEALLLFIEMEE 393
Query: 280 CDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRIN 339
G+ N + ++ AC R+ AF + IH +VK G D F+Q ++ Y+ G+I+
Sbjct: 394 SAGLLANSTTMAGVVPACVRSGAFSKKEAIHGFVVKRGLDRDRFVQNALMDMYSRLGKID 453
Query: 340 LARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQ 399
+A+ F + +WN +I G++ + EDA + + MQ ++ A
Sbjct: 454 IAKRIFGKMEDRDLVTWNTIITGYVFSERHEDALLMLHKMQ---------ILERKASERA 504
Query: 400 PNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAA 459
++L KPN IT++++ + A+ L +G+ H Y + N++ + + +A
Sbjct: 505 SRVSL-----------KPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSA 553
Query: 460 IIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIK 519
++DMYAKCG + + +VF I R +V WN I+ MHG++ + + + + +K
Sbjct: 554 LVDMYAKCGCLQMSRKVFDQIPIR--NVITWNVIVMAYGMHGNSQDAIDMLRMMMVQGVK 611
Query: 520 LNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEE 579
N +TFI V + C H+G+V+ G + F +MK Y VEP HY C+VDLLGRAG++++A +
Sbjct: 612 PNEVTFISVFAACSHSGMVNEGLKIFYNMKKDYGVEPSSDHYACVVDLLGRAGRVKEAYQ 671
Query: 580 VIRSMPMKADVV-IWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAG 638
+I +P D W +LL A RIH N+E+GE AA++L L+P+ VLL+NIY+ AG
Sbjct: 672 LINLIPRNFDKAGAWSSLLGACRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAG 731
Query: 639 RWEDAFSIRKEMRDCGMKRLPGFSGV 664
W A +R+ M+ G+++ PG S +
Sbjct: 732 LWYKATEVRRNMKAQGVRKEPGCSWI 757
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 141/584 (24%), Positives = 241/584 (41%), Gaps = 117/584 (20%)
Query: 42 GQQIHSLIFKSGLESNTF-IQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYI 100
G+QIH+ ++K G ++ + N+L+NLY KCG +FD S
Sbjct: 112 GKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISE-------------- 157
Query: 101 RNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLAS 160
RN VS+ S+I + W ALE FR M V P+ TL S
Sbjct: 158 RNQ-----------------VSWNSLISSLCSFEKWEMALEAFRCMLDEDVEPSSFTLVS 200
Query: 161 VISSSVHLG---GIWECRMLHGLVI-KLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEM 216
V + + G+ + +H + K ++ F+I L+ MY L ++ L
Sbjct: 201 VALACSNFPMPEGLLMGKQVHAYGLRKGELNSFII--NTLVAMYGKMGKLASSKVLLGSF 258
Query: 217 KERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYR 276
+ R++V+WN +L+ Q E+ EAL R
Sbjct: 259 EGRDLVTWNTVLSSLC-------------------------------QNEQFLEALEYLR 287
Query: 277 AMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAG-FDCYDFIQATIIHFYAAC 335
M+ +G+ P+ I ++ AC G ++H+ +K G D F+ + ++ Y C
Sbjct: 288 EMVLEGVEPDGFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNC 347
Query: 336 GRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYA 395
++ F+ I WNA+I G+ +N E+A LF M++
Sbjct: 348 KQVLSGCRVFDGMFDRKIGLWNAMITGYAQNEYDEEALLLFIEMEE-------------- 393
Query: 396 QNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDN 455
AG+ N TM V A SG + H +V+ + +
Sbjct: 394 ----------------SAGLLANSTTMAGVVPACVRSGAFSKKEAIHGFVVKRGLDRDRF 437
Query: 456 LSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAM---HGDANLTLKIYSD 512
+ A++DMY++ G I+ A +F + DR + WN II G H DA L L
Sbjct: 438 VQNALMDMYSRLGKIDIAKRIFGKMEDR--DLVTWNTIITGYVFSERHEDALLMLHKMQI 495
Query: 513 LEKR--------NIKLNSITFIGVLSTCCH-AGLVDLGERYFKSMKSVYNVEPDLKHYGC 563
LE++ ++K NSIT + +L +C + L E + ++K+ N+ D+
Sbjct: 496 LERKASERASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKN--NLATDVAVGSA 553
Query: 564 MVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVE 607
+VD+ + G L+ + +V +P++ +V+ W ++ A +HGN +
Sbjct: 554 LVDMYAKCGCLQMSRKVFDQIPIR-NVITWNVIVMAYGMHGNSQ 596
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 103/493 (20%), Positives = 210/493 (42%), Gaps = 107/493 (21%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSG-LESNTFIQNSLINLYAKCGLISQAKSMFD 82
+ S L CS + G+++H+ K+G L+ N+F+ ++L+++Y C K +
Sbjct: 299 FTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNC------KQVLS 352
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
C D + FD+ + +MI G+AQN+ EAL +
Sbjct: 353 GCRVFDGM---------------------FDRK----IGLWNAMITGYAQNEYDEEALLL 387
Query: 143 FRDMR-ILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYC 201
F +M G++ N T+A V+ + V G + +HG V+K +D + L++MY
Sbjct: 388 FIEMEESAGLLANSTTMAGVVPACVRSGAFSKKEAIHGFVVKRGLDRDRFVQNALMDMY- 446
Query: 202 VCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDG 261
++ G +++A+ +F ++ +D+V+W T+I G
Sbjct: 447 ------------------------------SRLGKIDIAKRIFGKMEDRDLVTWNTIITG 476
Query: 262 YLQVERLSEALTMYRAMLC-----------DGIAPNDVMIVDLISACGRAMAFGEGLQIH 310
Y+ ER +AL M M + PN + ++ ++ +C A +G +IH
Sbjct: 477 YVFSERHEDALLMLHKMQILERKASERASRVSLKPNSITLMTILPSCAALSALAKGKEIH 536
Query: 311 SIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIE 370
+ +K + + ++ YA CG + ++R
Sbjct: 537 AYAIKNNLATDVAVGSALVDMYAKCGCLQMSR---------------------------- 568
Query: 371 DARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIA 430
++F+ + R+V +W+ ++ Y + A+++ M+ GVKPNE+T +SVF A +
Sbjct: 569 ---KVFDQIPIRNVITWNVIVMAYGMHGNSQDAIDMLRMMMVQGVKPNEVTFISVFAACS 625
Query: 431 SSGTLKEG-RWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSP 489
SG + EG + + + + + + A ++D+ + G + A+++ I
Sbjct: 626 HSGMVNEGLKIFYNMKKDYGVEPSSDHYACVVDLLGRAGRVKEAYQLINLIPRNFDKAGA 685
Query: 490 WNAIICGLAMHGD 502
W++++ +H +
Sbjct: 686 WSSLLGACRIHNN 698
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 116/471 (24%), Positives = 199/471 (42%), Gaps = 77/471 (16%)
Query: 137 REALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLM--IDGFVIIST 194
REA+ + DM +LG+ P+ +++ + L + + +H V K +D V ++
Sbjct: 75 REAVLTYIDMIVLGIKPDNFAFPALLKAVADLQDMDLGKQIHAHVYKFGYGVDS-VTVAN 133
Query: 195 NLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVS 254
L+N+Y C +FD + ERN VSWN
Sbjct: 134 TLVNLYRKCGDFGAVYKVFDRISERNQVSWN----------------------------- 164
Query: 255 WGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGL----QIH 310
++I E+ AL +R ML + + P+ +V + AC EGL Q+H
Sbjct: 165 --SLISSLCSFEKWEMALEAFRCMLDEDVEPSSFTLVSVALACSN-FPMPEGLLMGKQVH 221
Query: 311 SIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIE 370
+ ++ G + FI T++ Y G+ +AS L+ F
Sbjct: 222 AYGLRKG-ELNSFIINTLVAMYGKMGK---------------LASSKVLLGSF------- 258
Query: 371 DARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIA 430
+ RD+ +W+ ++S QNEQ ALE MV GV+P+ T+ SV A +
Sbjct: 259 ---------EGRDLVTWNTVLSSLCQNEQFLEALEYLREMVLEGVEPDGFTISSVLPACS 309
Query: 431 SSGTLKEGRWAHEYVLNN-SITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSP 489
L+ G+ H Y L N S+ N + +A++DMY C + + VF + DR +
Sbjct: 310 HLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGCRVFDGMFDRKIGL-- 367
Query: 490 WNAIICGLAMHGDANLTLKIYSDLEKR-NIKLNSITFIGVLSTCCHAGLVDLGERYFKSM 548
WNA+I G A + L ++ ++E+ + NS T GV+ C +G E
Sbjct: 368 WNAMITGYAQNEYDEEALLLFIEMEESAGLLANSTTMAGVVPACVRSGAFSKKEA-IHGF 426
Query: 549 KSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAA 599
++ D ++D+ R G+++ A+ + M + D+V W T++
Sbjct: 427 VVKRGLDRDRFVQNALMDMYSRLGKIDIAKRIFGKMEDR-DLVTWNTIITG 476
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 122/294 (41%), Gaps = 42/294 (14%)
Query: 255 WGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIV 314
W ++ ++ L EA+ Y M+ GI P++ L+ A G QIH+ +
Sbjct: 61 WIDLLRSKVRSNLLREAVLTYIDMIVLGIKPDNFAFPALLKAVADLQDMDLGKQIHAHVY 120
Query: 315 KAGFDCYDFIQA-TIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDAR 373
K G+ A T+++ Y CG D A +
Sbjct: 121 KFGYGVDSVTVANTLVNLYRKCG--------------DFGAVY----------------- 149
Query: 374 QLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIAS-- 431
++F+ + +R+ SW+++IS E+ MALE F M+D V+P+ T+VSV A ++
Sbjct: 150 KVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDEDVEPSSFTLVSVALACSNFP 209
Query: 432 -SGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVF--YHIRDRTTSVS 488
L G+ H Y L LN + ++ MY K G + ++ + + RD T
Sbjct: 210 MPEGLLMGKQVHAYGLRKG-ELNSFIINTLVAMYGKMGKLASSKVLLGSFEGRDLVT--- 265
Query: 489 PWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGE 542
WN ++ L + L+ ++ ++ + T VL C H ++ G+
Sbjct: 266 -WNTVLSSLCQNEQFLEALEYLREMVLEGVEPDGFTISSVLPACSHLEMLRTGK 318
>gi|15229345|ref|NP_187126.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207287|sp|Q9SR01.1|PP212_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g04750, mitochondrial; Flags: Precursor
gi|6175175|gb|AAF04901.1|AC011437_16 hypothetical protein [Arabidopsis thaliana]
gi|332640610|gb|AEE74131.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 661
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 164/477 (34%), Positives = 267/477 (55%), Gaps = 19/477 (3%)
Query: 206 LVEARSLFDEMKERN---IVS---------WNVMLNGFAKAGLVELARELFERIPSKDVV 253
L++A S E+K+ + IVS WN ++ + + G +A ++F R+P DV
Sbjct: 139 LMKASSFLSEVKQIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVS 198
Query: 254 SWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSII 313
S+ MI GY + EAL +Y M+ DGI P++ ++ L+ CG G +H I
Sbjct: 199 SFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWI 258
Query: 314 VKAG--FDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIED 371
+ G + + ++ Y C LA+ F+ K + SWN ++ GF+R G +E
Sbjct: 259 ERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEA 318
Query: 372 ARQLFNNMQKRDVYSWSAMISGYAQNE-QPNMALELFHGM-VDAGVKPNEITMVSVFCAI 429
A+ +F+ M KRD+ SW++++ GY++ ELF+ M + VKP+ +TMVS+
Sbjct: 319 AQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGA 378
Query: 430 ASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSP 489
A++G L GRW H V+ + + LS+A+IDMY KCG I AF VF ++ V+
Sbjct: 379 ANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEK--DVAL 436
Query: 490 WNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMK 549
W ++I GLA HG+ L+++ +++ + N++T + VL+ C H+GLV+ G F MK
Sbjct: 437 WTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMK 496
Query: 550 SVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVI-RSMPMKADVVIWGTLLAASRIHGNVEV 608
+ +P+ +HYG +VDLL RAG++E+A++++ + MPM+ +WG++L+A R ++E
Sbjct: 497 DKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSACRGGEDIET 556
Query: 609 GERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGVV 665
E A L L+P VLLSNIYA GRW + R+ M + G+K+ G+S VV
Sbjct: 557 AELALTELLKLEPEKEGGYVLLSNIYATVGRWGYSDKTREAMENRGVKKTAGYSSVV 613
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 104/417 (24%), Positives = 192/417 (46%), Gaps = 38/417 (9%)
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
C +L N ++ Y+ A +VF + P S+ MI+G+A+ EAL+++
Sbjct: 161 CLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLY 220
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKL--MIDGFVIISTNLLNMYC 201
M G+ P+E T+ S++ HL I + +HG + + + +I+S LL+MY
Sbjct: 221 FKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYF 280
Query: 202 VCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDG 261
C A+ FD MK++++ SWN M+ GF + G +E A+ +F+++P +D+VSW +++ G
Sbjct: 281 KCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFG 340
Query: 262 YLQV---ERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGF 318
Y + +R L Y + + + P+ V +V LIS G +H ++++
Sbjct: 341 YSKKGCDQRTVREL-FYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQL 399
Query: 319 DCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNN 378
F+ + +I Y CG I A + F+ + +A W ++I G +G + A QLF
Sbjct: 400 KGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGR 459
Query: 379 MQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG 438
MQ + GV PN +T+++V A + SG ++EG
Sbjct: 460 MQ-------------------------------EEGVTPNNVTLLAVLTACSHSGLVEEG 488
Query: 439 RWAHEYVLNN-SITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAII 494
++ + +++D+ + G + A ++ S S W +I+
Sbjct: 489 LHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSIL 545
Score = 138 bits (348), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 91/344 (26%), Positives = 170/344 (49%), Gaps = 39/344 (11%)
Query: 27 VSALRYCSAHIA-VSQGQQIHSLIFKSG--LESNTFIQNSLINLYAKCGLISQAKSMFDS 83
V +L C H++ + G+ +H I + G SN + N+L+++Y KC AK FD+
Sbjct: 235 VLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDA 294
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDC-WREALEV 142
D + N M+ G++R + A+ VFD+ P + VS+ S++ G+++ C R E+
Sbjct: 295 MKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVREL 354
Query: 143 FRDMRIL-GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYC 201
F +M I+ V P+ VT+ S+IS + + G + R +HGLVI+L + G +S+ L++MYC
Sbjct: 355 FYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYC 414
Query: 202 VCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDG 261
C + A +F E+++ W M+ G A G + A +LF R+
Sbjct: 415 KCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQE------------ 462
Query: 262 YLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIV-KAGFDC 320
+G+ PN+V ++ +++AC + EGL + + + K GFD
Sbjct: 463 -------------------EGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDP 503
Query: 321 YDFIQATIIHFYAACGRINLAR--LQFELGIKDHIASWNALIAG 362
+++ GR+ A+ +Q ++ ++ + W ++++
Sbjct: 504 ETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSA 547
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 106/235 (45%), Gaps = 38/235 (16%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+ +VS + + + +S G+ +H L+ + L+ + F+ ++LI++Y KCG+I +A +F +
Sbjct: 369 VTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKT 428
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
+ D +TSMI G A + ++AL++F
Sbjct: 429 ATEKD-------------------------------VALWTSMITGLAFHGNGQQALQLF 457
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWE-CRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
M+ GV PN VTL +V+++ H G + E + + + K D +L+++ C
Sbjct: 458 GRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCR 517
Query: 203 CSSLVEARSLFD-EMKERNIVS-WNVMLNGFAKAGLVELAR----ELFERIPSKD 251
+ EA+ + +M R S W +L+ +E A EL + P K+
Sbjct: 518 AGRVEEAKDIVQKKMPMRPSQSMWGSILSACRGGEDIETAELALTELLKLEPEKE 572
>gi|414883628|tpg|DAA59642.1| TPA: hypothetical protein ZEAMMB73_113196, partial [Zea mays]
Length = 635
Score = 296 bits (757), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 150/358 (41%), Positives = 220/358 (61%), Gaps = 3/358 (0%)
Query: 306 GLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQF-ELGIKDHIASWNALIAGFI 364
G +H++ VKAG +++ IHFY CG + R F EL I + +WNA++AG++
Sbjct: 151 GTHVHALAVKAGAAGDLYVRNAQIHFYGVCGDVAAMRKVFDELPIVRDVVTWNAVLAGYV 210
Query: 365 RNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVS 424
R GM+ AR++F+ M RD SWS +I GY + +P +AL +F MV GVK NE +V+
Sbjct: 211 RAGMVGVAREVFDGMPVRDEVSWSTVIGGYVKEGEPEVALGVFKNMVAQGVKANEAAIVT 270
Query: 425 VFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRT 484
A A G L++G++ HE V +T++ NL AA+IDMY+KCGS+ A EVF + R
Sbjct: 271 ALSAAAQLGLLEQGKFVHEVVKRVGMTMSVNLGAALIDMYSKCGSVAAAKEVFDAMPRR- 329
Query: 485 TSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERY 544
V WN++ICGLA HG + ++++ SITF+GVL+ C GLVD G RY
Sbjct: 330 -DVFAWNSMICGLATHGLGHDAVQLFEKFVSEGFCPTSITFVGVLNACSRTGLVDEGRRY 388
Query: 545 FKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHG 604
FK M Y++E +++HYGCMVDLL RAG +++A E+I M + D V+WGT+L+A + HG
Sbjct: 389 FKLMAEKYDIESEMEHYGCMVDLLSRAGLVQEAVELIEGMRIPPDPVLWGTILSACKRHG 448
Query: 605 NVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
V++G L L P+H VLL++IYA A +W++ +RK M + G + G+S
Sbjct: 449 LVDLGITVGNKLIELDPAHDGYYVLLASIYAKAKKWDEVRKVRKLMSNRGTSKSAGWS 506
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 88/343 (25%), Positives = 158/343 (46%), Gaps = 42/343 (12%)
Query: 177 LHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMK-ERNIVSWNVMLNGFAKAG 235
+H L +K G + + ++ Y VC + R +FDE+ R++V+WN +L G+ +AG
Sbjct: 154 VHALAVKAGAAGDLYVRNAQIHFYGVCGDVAAMRKVFDELPIVRDVVTWNAVLAGYVRAG 213
Query: 236 LVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLIS 295
+V +ARE+F+ +P +D VSW T+I GY++ AL +++ M+ G+ N+ IV +S
Sbjct: 214 MVGVAREVFDGMPVRDEVSWSTVIGGYVKEGEPEVALGVFKNMVAQGVKANEAAIVTALS 273
Query: 296 ACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIAS 355
A + +G +H ++ + G + A +I Y+ CG + A+ F+ + + +
Sbjct: 274 AAAQLGLLEQGKFVHEVVKRVGMTMSVNLGAALIDMYSKCGSVAAAKEVFDAMPRRDVFA 333
Query: 356 WNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGV 415
WN++I G +G+ DA QLF V G
Sbjct: 334 WNSMICGLATHGLGHDAVQLFEK-------------------------------FVSEGF 362
Query: 416 KPNEITMVSVFCAIASSGTLKEGR-----WAHEYVLNNSITLNDNLSAAIIDMYAKCGSI 470
P IT V V A + +G + EGR A +Y + + + ++D+ ++ G +
Sbjct: 363 CPTSITFVGVLNACSRTGLVDEGRRYFKLMAEKYDIESEM----EHYGCMVDLLSRAGLV 418
Query: 471 NTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDL 513
A E+ +R V W I+ HG +L + + + L
Sbjct: 419 QEAVELIEGMRIPPDPVL-WGTILSACKRHGLVDLGITVGNKL 460
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/376 (23%), Positives = 169/376 (44%), Gaps = 74/376 (19%)
Query: 42 GQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTL-DPVACNIMISGYI 100
G +H+L K+G + +++N+ I+ Y CG ++ + +FD + D V N +++GY+
Sbjct: 151 GTHVHALAVKAGAAGDLYVRNAQIHFYGVCGDVAAMRKVFDELPIVRDVVTWNAVLAGYV 210
Query: 101 RNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLAS 160
R + AREVFD P++ VS++++I G+ + AL VF++M GV NE + +
Sbjct: 211 RAGMVGVAREVFDGMPVRDEVSWSTVIGGYVKEGEPEVALGVFKNMVAQGVKANEAAIVT 270
Query: 161 VISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERN 220
+S++ LG + + + +H +V ++ + V + L++MY C S+ A+ +FD M R+
Sbjct: 271 ALSAAAQLGLLEQGKFVHEVVKRVGMTMSVNLGAALIDMYSKCGSVAAAKEVFDAMPRRD 330
Query: 221 IVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLC 280
+ +WN M+ G A GL A +LFE+ S
Sbjct: 331 VFAWNSMICGLATHGLGHDAVQLFEKFVS------------------------------- 359
Query: 281 DGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINL 340
+G P + V +++AC R EG + ++ + YD
Sbjct: 360 EGFCPTSITFVGVLNACSRTGLVDEGRRYFKLMAEK----YD------------------ 397
Query: 341 ARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ-KRDVYSWSAMISGYAQNEQ 399
I+ + + ++ R G++++A +L M+ D W ++S +
Sbjct: 398 --------IESEMEHYGCMVDLLSRAGLVQEAVELIEGMRIPPDPVLWGTILSACKR--- 446
Query: 400 PNMALELFHGMVDAGV 415
HG+VD G+
Sbjct: 447 --------HGLVDLGI 454
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 100/239 (41%), Gaps = 64/239 (26%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E A+V+AL + + QG+ +H ++ + G+ + + +LI++Y+KCG ++ AK +FD
Sbjct: 265 EAAIVTALSAAAQLGLLEQGKFVHEVVKRVGMTMSVNLGAALIDMYSKCGSVAAAKEVFD 324
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+ D A N MI G + +DA ++F+K F
Sbjct: 325 AMPRRDVFAWNSMICGLATHGLGHDAVQLFEK---------------FVSE--------- 360
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
G P +T V+++ G + E R KLM + + I
Sbjct: 361 -------GFCPTSITFVGVLNACSRTGLVDEGRRY----FKLMAEKYDI----------- 398
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFE--RIPSKDVVSWGTMI 259
E + + M++ ++AGLV+ A EL E RIP D V WGT++
Sbjct: 399 ---------------ESEMEHYGCMVDLLSRAGLVQEAVELIEGMRIPP-DPVLWGTIL 441
>gi|224141133|ref|XP_002323929.1| predicted protein [Populus trichocarpa]
gi|222866931|gb|EEF04062.1| predicted protein [Populus trichocarpa]
Length = 770
Score = 295 bits (756), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 201/662 (30%), Positives = 317/662 (47%), Gaps = 106/662 (16%)
Query: 6 FHSVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLI 65
F NS Y L R+ A+ + G Q+HS I K G + F+ N+LI
Sbjct: 149 FACKMNSSGVVFDAVTYTTVLSFCWRHVEAYFLI--GLQLHSCIVKFGFDCEVFVGNALI 206
Query: 66 NLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTS 125
++Y++ G + +A+ +F+ T D V+ N MISGY +
Sbjct: 207 SMYSRWGHLVEARRVFEEMKTRDLVSWNAMISGYSQEG---------------------- 244
Query: 126 MIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLM 185
I G EA+ +F M G+ + ++ S +S+ + + R +HGL IK
Sbjct: 245 -IYGL-------EAISMFLQMFRGGMELDRISFTSAVSACGYEKNLELARQIHGLSIKTR 296
Query: 186 IDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFE 245
+ V +S L++ Y C + +AR +F M ERN+VSW M++
Sbjct: 297 HEKHVAVSNVLISTYFKCQVIEDARLVFQNMNERNVVSWTTMIS---------------- 340
Query: 246 RIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGE 305
ID +EA++ + M DG+ PNDV V LI A +
Sbjct: 341 -------------IDE-------AEAVSFFNEMRLDGVYPNDVTFVGLIHAITIGELVVQ 380
Query: 306 GLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQF-ELGIKDHIASWNALIAGFI 364
G +H K GF + +II YA + + F EL +D IA WNALI+GF+
Sbjct: 381 GKMVHGFCTKTGFSSKSNVCNSIITMYAKFKSMQDSVKVFQELKYQDIIA-WNALISGFV 439
Query: 365 RNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVS 424
NG+ ++A + F F G++++ KPN+ + S
Sbjct: 440 HNGLCQEAIRAF------------------------------FSGLIES--KPNQYSFGS 467
Query: 425 VFCAI--ASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRD 482
+ AI A +LK G+ H ++ + + +S+A++DMYAK GSI + +VF +
Sbjct: 468 ILNAIGAAEDVSLKYGQRCHSQIIKLGLNTDPIVSSALLDMYAKRGSICESQKVF--VET 525
Query: 483 RTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGE 542
S W II A HGD + + ++ + ++ +SITF+ +L+ C G+VD+G
Sbjct: 526 PQQSQFAWTTIISAYARHGDYESVMNWFEEMRRLEVRPDSITFLSILTACGRRGMVDMGC 585
Query: 543 RYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRI 602
F SM Y +EP +HY C+VD+LGRAG+LE+AE ++ +P + + +LL A R+
Sbjct: 586 HLFGSMVKDYQIEPSAEHYSCLVDMLGRAGRLEEAERLMSHIPGGPGLSVLQSLLGACRV 645
Query: 603 HGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
HGNV++GER A +L ++P+ S VL+SN+YA+ G+WE +RK MR G+K+ GFS
Sbjct: 646 HGNVDMGERVADALMEMEPTESGSYVLMSNLYAEIGKWEMVAKVRKRMRVKGVKKEVGFS 705
Query: 663 GV 664
V
Sbjct: 706 WV 707
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 109/476 (22%), Positives = 191/476 (40%), Gaps = 94/476 (19%)
Query: 177 LHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGL 236
+HG I I+S +L+NMYC +A +F+ + +IVSWN +L+G
Sbjct: 86 IHGFSIIHEFVNVTIVSNSLMNMYCKSGQFCKALCIFENLTHPDIVSWNTVLSGCQ---- 141
Query: 237 VELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISA 296
S+D S+ ++ G+ + V ++S
Sbjct: 142 -----------TSEDAFSFACKMNS-------------------SGVVFDAVTYTTVLSF 171
Query: 297 CGRAMA--FGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIA 354
C R + F GLQ+HS IVK GFDC F+ +I Y+ G + AR FE +
Sbjct: 172 CWRHVEAYFLIGLQLHSCIVKFGFDCEVFVGNALISMYSRWGHLVEARRVFEEMKTRDLV 231
Query: 355 SWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAG 414
SWNA+I+G+ + G +Y A+ +M L++F G G
Sbjct: 232 SWNAMISGYSQEG----------------IYGLEAI----------SMFLQMFRG----G 261
Query: 415 VKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAF 474
++ + I+ S A L+ R H + + +S +I Y KC I A
Sbjct: 262 MELDRISFTSAVSACGYEKNLELARQIHGLSIKTRHEKHVAVSNVLISTYFKCQVIEDAR 321
Query: 475 EVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCH 534
VF ++ +R +V W +I D + ++++ + N +TF+G++
Sbjct: 322 LVFQNMNER--NVVSWTTMIS-----IDEAEAVSFFNEMRLDGVYPNDVTFVGLIHAITI 374
Query: 535 AGLVDLGERY--------FKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPM 586
LV G+ F S +V N ++ + + ++D+ +V + +
Sbjct: 375 GELVVQGKMVHGFCTKTGFSSKSNVCN---------SIITMYAKFKSMQDSVKVFQELKY 425
Query: 587 KADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWED 642
+ D++ W L++ +G + RA +GL S P++ +I G ED
Sbjct: 426 Q-DIIAWNALISGFVHNGLCQEAIRAF--FSGLIESK-PNQYSFGSILNAIGAAED 477
>gi|356567054|ref|XP_003551738.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Glycine max]
Length = 518
Score = 295 bits (756), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 163/470 (34%), Positives = 257/470 (54%), Gaps = 34/470 (7%)
Query: 227 MLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPN 286
M+ A + ++ A ++F +IP D W T I G Q A+ +Y M + P+
Sbjct: 47 MVGPNATSAVIRYALQMFAQIPQPDTFMWNTYIRGSSQSHDPVHAVALYAQMDQRSVKPD 106
Query: 287 DVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFE 346
+ ++ AC + G +H +++ GF ++ T++ F+A CG + +A F+
Sbjct: 107 NFTFPFVLKACTKLFWVNTGSAVHGRVLRLGFGSNVVVRNTLLVFHAKCGDLKVATDIFD 166
Query: 347 LGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQ---------- 396
K + +W+ALIAG+ + G + AR+LF+ M KRD+ SW+ MI+ Y +
Sbjct: 167 DSDKGDVVAWSALIAGYAQRGDLSVARKLFDEMPKRDLVSWNVMITVYTKHGEMESARRL 226
Query: 397 -NEQP--------------------NMALELFHGMVDAGVKPNEITMVSVFCAIASSGTL 435
+E P ALELF M G P+E+TM+S+ A A G L
Sbjct: 227 FDEAPMKDIVSWNALIGGYVLRNLNREALELFDEMCGVGECPDEVTMLSLLSACADLGDL 286
Query: 436 KEGRWAHEYVLN-NSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAII 494
+ G H ++ N L+ L A++DMYAKCG+I A VF+ IRD+ V WN++I
Sbjct: 287 ESGEKVHAKIIEMNKGKLSTLLGNALVDMYAKCGNIGKAVRVFWLIRDK--DVVSWNSVI 344
Query: 495 CGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNV 554
GLA HG A +L ++ +++ + + +TF+GVL+ C HAG VD G RYF MK+ Y +
Sbjct: 345 SGLAFHGHAEESLGLFREMKMTKVCPDEVTFVGVLAACSHAGNVDEGNRYFHLMKNKYKI 404
Query: 555 EPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAK 614
EP ++H GC+VD+LGRAG L++A I SM ++ + ++W +LL A ++HG+VE+ +RA +
Sbjct: 405 EPTIRHCGCVVDMLGRAGLLKEAFNFIASMKIEPNAIVWRSLLGACKVHGDVELAKRANE 464
Query: 615 SLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
L ++ VLLSN+YA G W+ A ++RK M D G+ + G S V
Sbjct: 465 QLLRMRGDQSGDYVLLSNVYASQGEWDGAENVRKLMDDNGVTKNRGSSFV 514
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 116/506 (22%), Positives = 209/506 (41%), Gaps = 92/506 (18%)
Query: 43 QQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRN 102
+QIH+L+ +GL SN L+ ++ A SM +T S IR
Sbjct: 18 KQIHALMIVNGLTSNVGFLRKLV--------LTTAMSMVGPNAT----------SAVIRY 59
Query: 103 DRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVI 162
A ++F + P + + I G +Q+ A+ ++ M V P+ T V+
Sbjct: 60 -----ALQMFAQIPQPDTFMWNTYIRGSSQSHDPVHAVALYAQMDQRSVKPDNFTFPFVL 114
Query: 163 SSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIV 222
+ L + +HG V++L V++ LL + C L A +FD+ + ++V
Sbjct: 115 KACTKLFWVNTGSAVHGRVLRLGFGSNVVVRNTLLVFHAKCGDLKVATDIFDDSDKGDVV 174
Query: 223 SWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQ------VERL-------- 268
+W+ ++ G+A+ G + +AR+LF+ +P +D+VSW MI Y + RL
Sbjct: 175 AWSALIAGYAQRGDLSVARKLFDEMPKRDLVSWNVMITVYTKHGEMESARRLFDEAPMKD 234
Query: 269 -----------------SEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHS 311
EAL ++ M G P++V ++ L+SAC G ++H+
Sbjct: 235 IVSWNALIGGYVLRNLNREALELFDEMCGVGECPDEVTMLSLLSACADLGDLESGEKVHA 294
Query: 312 IIVKAGF-DCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIE 370
I++ + ++ YA CG I A F L + SWN++I+G +G E
Sbjct: 295 KIIEMNKGKLSTLLGNALVDMYAKCGNIGKAVRVFWLIRDKDVVSWNSVISGLAFHGHAE 354
Query: 371 DARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIA 430
++ LF M+ V P+E+T V V A +
Sbjct: 355 ESLGLFREMKMTKVC-------------------------------PDEVTFVGVLAACS 383
Query: 431 SSGTLKEG-RWAHEYVLNNSITLNDNLS--AAIIDMYAKCGSINTAFEVFYHIRDRTTSV 487
+G + EG R+ H ++ N + + ++DM + G + AF ++ ++
Sbjct: 384 HAGNVDEGNRYFH--LMKNKYKIEPTIRHCGCVVDMLGRAGLLKEAFNFIASMKIEPNAI 441
Query: 488 SPWNAIICGLAMHGDANLTLKIYSDL 513
W +++ +HGD L + L
Sbjct: 442 V-WRSLLGACKVHGDVELAKRANEQL 466
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 93/384 (24%), Positives = 175/384 (45%), Gaps = 75/384 (19%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKC------------------ 71
L+ C+ V+ G +H + + G SN ++N+L+ +AKC
Sbjct: 114 LKACTKLFWVNTGSAVHGRVLRLGFGSNVVVRNTLLVFHAKCGDLKVATDIFDDSDKGDV 173
Query: 72 -------------GLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIK 118
G +S A+ +FD D V+ N+MI+ Y ++ + AR +FD+ P+K
Sbjct: 174 VAWSALIAGYAQRGDLSVARKLFDEMPKRDLVSWNVMITVYTKHGEMESARRLFDEAPMK 233
Query: 119 CCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLH 178
VS+ ++I G+ + REALE+F +M +G P+EVT+ S++S+ LG + +H
Sbjct: 234 DIVSWNALIGGYVLRNLNREALELFDEMCGVGECPDEVTMLSLLSACADLGDLESGEKVH 293
Query: 179 GLVIKLMIDGF-VIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLV 237
+I++ ++ L++MY C ++ +A +F ++++++VSWN +++G A G
Sbjct: 294 AKIIEMNKGKLSTLLGNALVDMYAKCGNIGKAVRVFWLIRDKDVVSWNSVISGLAFHGHA 353
Query: 238 ELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISAC 297
E E+L ++R M + P++V V +++AC
Sbjct: 354 E-------------------------------ESLGLFREMKMTKVCPDEVTFVGVLAAC 382
Query: 298 GRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIH---FYAACGRINLARLQF----ELGIK 350
A EG + ++ K + I+ TI H GR L + F + I+
Sbjct: 383 SHAGNVDEGNRYFHLM-KNKYK----IEPTIRHCGCVVDMLGRAGLLKEAFNFIASMKIE 437
Query: 351 DHIASWNALIAGFIRNGMIEDARQ 374
+ W +L+ +G +E A++
Sbjct: 438 PNAIVWRSLLGACKVHGDVELAKR 461
>gi|449502858|ref|XP_004161763.1| PREDICTED: uncharacterized LOC101222622 [Cucumis sativus]
Length = 2355
Score = 295 bits (756), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 157/419 (37%), Positives = 239/419 (57%), Gaps = 34/419 (8%)
Query: 278 MLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATII--HFYAAC 335
+L + P++ ++ AC EG ++H + K G + F++ +++ +F C
Sbjct: 118 VLPNAPNPDEYTFTSVLKACAGLAQVLEGQKVHCFVTKYGCESNLFVRNSLVDLYFKVGC 177
Query: 336 -----------------------------GRINLARLQFELGIKDHIASWNALIAGFIRN 366
G ++ AR+ F+ ++ ++ SW+ +I+G+ R
Sbjct: 178 NCIAQKLFDEMVVRDVVSWNTLISGYCFSGMVDKARMVFDGMMEKNLVSWSTMISGYARV 237
Query: 367 GMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMV-DAGVKPNEITMVSV 425
G +E+ARQLF NM R+V SW+AMI+GYAQNE+ A+ELF M + G+ PN++T+VSV
Sbjct: 238 GNLEEARQLFENMPMRNVVSWNAMIAGYAQNEKYADAIELFRQMQHEGGLAPNDVTLVSV 297
Query: 426 FCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTT 485
A A G L G+W H ++ N I + L A+ DMYAKCG + A VF+ + +R
Sbjct: 298 LSACAHLGALDLGKWIHRFIRRNKIEVGLFLGNALADMYAKCGCVLEAKGVFHEMHER-- 355
Query: 486 SVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYF 545
V W+ II GLAM+G AN ++++ + ++ N I+F+G+L+ C HAGLVD G YF
Sbjct: 356 DVISWSIIIMGLAMYGYANEAFNFFAEMIEDGLEPNDISFMGLLTACTHAGLVDKGLEYF 415
Query: 546 KSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGN 605
M VY + P ++HYGC+VDLL RAG+L+ AE +I SMPM+ +V++WG LL RI+ +
Sbjct: 416 DMMPQVYGITPKIEHYGCVVDLLSRAGRLDQAESLINSMPMQPNVIVWGALLGGCRIYKD 475
Query: 606 VEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
E GER + L +H S V L+N+YA GR +DA S R MRD + PG S +
Sbjct: 476 AERGERVVWRILELDSNHSGSLVYLANVYASMGRLDDAASCRLRMRDNKSMKTPGCSWI 534
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 110/417 (26%), Positives = 195/417 (46%), Gaps = 67/417 (16%)
Query: 122 SYTSMIMGFAQNDCWREALEVFRDMRILGVIPN--EVTLASVISSSVHLGGIWECRMLHG 179
+Y +++ F+Q++ W + F + +L PN E T SV+ + L + E + +H
Sbjct: 92 AYNALLKAFSQHNAWHTTISYFNNQLVLPNAPNPDEYTFTSVLKACAGLAQVLEGQKVHC 151
Query: 180 LVIKLMIDGFVIISTNLLNMY------CVCSSLVE------------------------- 208
V K + + + +L+++Y C+ L +
Sbjct: 152 FVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKLFDEMVVRDVVSWNTLISGYCFSGMVDK 211
Query: 209 ARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERL 268
AR +FD M E+N+VSW+ M++G+A+ G +E AR+LFE +P ++VVSW MI GY Q E+
Sbjct: 212 ARMVFDGMMEKNLVSWSTMISGYARVGNLEEARQLFENMPMRNVVSWNAMIAGYAQNEKY 271
Query: 269 SEALTMYRAMLCD-GIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQAT 327
++A+ ++R M + G+APNDV +V ++SAC A G IH I + + F+
Sbjct: 272 ADAIELFRQMQHEGGLAPNDVTLVSVLSACAHLGALDLGKWIHRFIRRNKIEVGLFLGNA 331
Query: 328 IIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSW 387
+ YA C G + +A+ +F+ M +RDV SW
Sbjct: 332 LADMYAKC-------------------------------GCVLEAKGVFHEMHERDVISW 360
Query: 388 SAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLN 447
S +I G A N A F M++ G++PN+I+ + + A +G + +G + +
Sbjct: 361 SIIIMGLAMYGYANEAFNFFAEMIEDGLEPNDISFMGLLTACTHAGLVDKGLEYFDMMPQ 420
Query: 448 -NSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDA 503
IT ++D+ ++ G ++ A E + +V W A++ G ++ DA
Sbjct: 421 VYGITPKIEHYGCVVDLLSRAGRLDQA-ESLINSMPMQPNVIVWGALLGGCRIYKDA 476
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 111/421 (26%), Positives = 189/421 (44%), Gaps = 97/421 (23%)
Query: 8 SVFNSQK--ANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLI 65
S FN+Q N N D E S L+ C+ V +GQ++H + K G ESN F++NSL+
Sbjct: 111 SYFNNQLVLPNAPNPD-EYTFTSVLKACAGLAQVLEGQKVHCFVTKYGCESNLFVRNSLV 169
Query: 66 NLYAKCG-------------------------------LISQAKSMFDSCSTLDPVACNI 94
+LY K G ++ +A+ +FD + V+ +
Sbjct: 170 DLYFKVGCNCIAQKLFDEMVVRDVVSWNTLISGYCFSGMVDKARMVFDGMMEKNLVSWST 229
Query: 95 MISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILG-VIP 153
MISGY R L +AR++F+ P++ VS+ +MI G+AQN+ + +A+E+FR M+ G + P
Sbjct: 230 MISGYARVGNLEEARQLFENMPMRNVVSWNAMIAGYAQNEKYADAIELFRQMQHEGGLAP 289
Query: 154 NEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLF 213
N+VTL SV+S+ HLG + + +H + + I+ + + L +MY C ++E
Sbjct: 290 NDVTLVSVLSACAHLGALDLGKWIHRFIRRNKIEVGLFLGNALADMYAKCGCVLE----- 344
Query: 214 DEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALT 273
A+ +F + +DV+SW +I G +EA
Sbjct: 345 --------------------------AKGVFHEMHERDVISWSIIIMGLAMYGYANEAFN 378
Query: 274 MYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYA 333
+ M+ DG+ PND+ + L++AC H+ +V G + +D +
Sbjct: 379 FFAEMIEDGLEPNDISFMGLLTAC-----------THAGLVDKGLEYFDMMPQVY----- 422
Query: 334 ACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ-KRDVYSWSAMIS 392
GI I + ++ R G ++ A L N+M + +V W A++
Sbjct: 423 --------------GITPKIEHYGCVVDLLSRAGRLDQAESLINSMPMQPNVIVWGALLG 468
Query: 393 G 393
G
Sbjct: 469 G 469
>gi|242094598|ref|XP_002437789.1| hypothetical protein SORBIDRAFT_10g002620 [Sorghum bicolor]
gi|241916012|gb|EER89156.1| hypothetical protein SORBIDRAFT_10g002620 [Sorghum bicolor]
Length = 623
Score = 295 bits (756), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 184/600 (30%), Positives = 308/600 (51%), Gaps = 56/600 (9%)
Query: 68 YAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMI 127
Y G + A + + DP N +I+ R+ DAR++FD TP VS+T+++
Sbjct: 24 YVSYGSMGAASAAVGLEQSHDP---NRLIAELAAAGRVWDARKLFDGTPDWDVVSWTALV 80
Query: 128 MGFAQNDCWREALEVFR--DMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLM 185
+A+ R+A E+F D R N VT +++S + E L + M
Sbjct: 81 SAYARRGMLRDARELFDRPDAR-----RNVVTWTALLSGYARARLVDEAEAL----FQRM 131
Query: 186 IDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFE 245
V+ +L Y + +A +LFD M R+ SWN++L ++G V+ ARELF
Sbjct: 132 PQRNVVSWNTMLEAYAAAGRVGDACALFDRMPVRDAGSWNILLATLVRSGSVDKARELFG 191
Query: 246 RIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGE 305
R+P +DV++W TM+DG + ++ EA ++ +M + + MI
Sbjct: 192 RMPERDVMAWTTMVDGVARSGKVDEARVLFDSMPERNVVSWNAMISG------------- 238
Query: 306 GLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIR 365
Y RI+ A F + IAS N ++ GFI+
Sbjct: 239 --------------------------YTRNHRIDEALDLFMKMPERDIASCNIMVTGFIQ 272
Query: 366 NGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSV 425
N ++ AR+LF+ M +R+V +W+ M++GY + +Q +AL LF GM+ AG +PN++T +
Sbjct: 273 NKDLKRARELFDEMPERNVVTWTTMMNGYLKGKQSELALGLFSGMLMAGTRPNQVTFLGA 332
Query: 426 FCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTT 485
A + L EG+ H+ + + + + +A++++YAKCG I A ++F R++
Sbjct: 333 LDACSDLAALCEGKQVHQMICKTTFQFDAFVESALMNVYAKCGEIGLARKLFDLSREK-- 390
Query: 486 SVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYF 545
+ WN II A HG + +Y +++ + N +T++ +LS C H+GLVD G + F
Sbjct: 391 DLISWNGIIAAYAHHGVGIEAILLYEKMQENGYRPNDVTYVVLLSACSHSGLVDEGLKIF 450
Query: 546 KSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMK-ADVVIWGTLLAASRIHG 604
+SM + ++ +HY C++DL RAG+L+DA+ +I + +K A +W LL HG
Sbjct: 451 ESMVNDRSIAVRDEHYTCLIDLCSRAGRLDDAKRLIHYLKIKPASGSVWSALLGGCNAHG 510
Query: 605 NVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
N +G AA++L +P + + LLSNIYA AG+W++A IR EM + G+K+ PG S +
Sbjct: 511 NESIGNLAARNLLQAEPDNAGTYTLLSNIYASAGKWKEAAEIRSEMNNRGLKKQPGCSWI 570
Score = 198 bits (504), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 134/513 (26%), Positives = 251/513 (48%), Gaps = 51/513 (9%)
Query: 9 VFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLY 68
V++++K D+++ +AL SA+ + L + N +L++ Y
Sbjct: 58 VWDARKLFDGTPDWDVVSWTAL--VSAYARRGMLRDARELFDRPDARRNVVTWTALLSGY 115
Query: 69 AKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIM 128
A+ L+ +A+++F + V+ N M+ Y R+ DA +FD+ P++ S+ ++
Sbjct: 116 ARARLVDEAEALFQRMPQRNVVSWNTMLEAYAAAGRVGDACALFDRMPVRDAGSWNILLA 175
Query: 129 GFAQNDCWREALEVFRDMRILGVIPNEVTLA--SVISSSVHLGGIWECRMLHGLVIKLMI 186
++ +A E+F G +P +A +++ G + E R+L M
Sbjct: 176 TLVRSGSVDKARELF------GRMPERDVMAWTTMVDGVARSGKVDEARVL----FDSMP 225
Query: 187 DGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFER 246
+ V+ +++ Y + EA LF +M ER+I S N+M+ GF + ++ ARELF+
Sbjct: 226 ERNVVSWNAMISGYTRNHRIDEALDLFMKMPERDIASCNIMVTGFIQNKDLKRARELFDE 285
Query: 247 IPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEG 306
+P ++VV+W TM++GYL+ ++ AL ++ ML G PN V + + AC A EG
Sbjct: 286 MPERNVVTWTTMMNGYLKGKQSELALGLFSGMLMAGTRPNQVTFLGALDACSDLAALCEG 345
Query: 307 LQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRN 366
Q+H +I K F F+++ +++ YA CG I LAR F+L + + SWN +IA + +
Sbjct: 346 KQVHQMICKTTFQFDAFVESALMNVYAKCGEIGLARKLFDLSREKDLISWNGIIAAYAHH 405
Query: 367 GMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVF 426
G+ +A L+ MQ+ G +PN++T V +
Sbjct: 406 GVGIEAILLYEKMQEN-------------------------------GYRPNDVTYVVLL 434
Query: 427 CAIASSGTLKEGRWAHEYVLNN-SITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTT 485
A + SG + EG E ++N+ SI + D +ID+ ++ G ++ A + ++++ +
Sbjct: 435 SACSHSGLVDEGLKIFESMVNDRSIAVRDEHYTCLIDLCSRAGRLDDAKRLIHYLKIKPA 494
Query: 486 SVSPWNAIICGLAMHGDANLTLKIYSDLEKRNI 518
S S W+A++ G HG+ ++ +L RN+
Sbjct: 495 SGSVWSALLGGCNAHGNESI-----GNLAARNL 522
>gi|357504267|ref|XP_003622422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355497437|gb|AES78640.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 952
Score = 295 bits (756), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 185/639 (28%), Positives = 306/639 (47%), Gaps = 72/639 (11%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
L CS + G+ IH K G+ N F+ N+L+NLY C + +A+++FD +
Sbjct: 249 LSACSDLQDLKSGKAIHGFALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMPHRNV 308
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
+ N + S Y+ GF Q + L VFR+M +
Sbjct: 309 ITWNSLASCYVN--------------------------CGFPQ-----KGLNVFREMGLN 337
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
GV P+ + ++S++ + L + + +HG +K + V + T L+N+Y C + EA
Sbjct: 338 GVKPDPMAMSSILPACSQLKDLKSGKTIHGFAVKHGMVEDVFVCTALVNLYANCLCVREA 397
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLS 269
+++FD M P ++VV+W ++ Y+
Sbjct: 398 QTVFDLM-------------------------------PHRNVVTWNSLSSCYVNCGFPQ 426
Query: 270 EALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATII 329
+ L ++R M+ +G+ P+ V ++ ++ AC G IH V+ G F+ ++
Sbjct: 427 KGLNVFREMVLNGVKPDLVTMLSILHACSDLQDLKSGKVIHGFAVRHGMVEDVFVCNALL 486
Query: 330 HFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ----KRDVY 385
YA C + A++ F+L +ASWN ++ + N E +F+ M K D
Sbjct: 487 SLYAKCVCVREAQVVFDLIPHREVASWNGILTAYFTNKEYEKGLYMFSQMNRDEVKADEI 546
Query: 386 SWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYV 445
+WS +I G +N + A+E+F M G KP+E T+ S+ A + S L+ G+ H YV
Sbjct: 547 TWSVVIGGCVKNSRIEEAMEIFRKMQTMGFKPDETTIYSILRACSLSECLRMGKEIHCYV 606
Query: 446 LNNSITLNDNLSAAIIDMYAKCGSINTAFEVF--YHIRDRTTSVSPWNAIICGLAMHGDA 503
+ + + A++DMYAKCG ++ + VF I+D V WN +I MHG+
Sbjct: 607 FRHWKDWDLARTNALVDMYAKCGGLSLSRNVFDMMPIKD----VFSWNTMIFANGMHGNG 662
Query: 504 NLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGC 563
L ++ + +K +S TF VLS C H+ LV+ G + F SM + VEP+ +HY C
Sbjct: 663 KEALSLFEKMLLSMVKPDSATFTCVLSACSHSMLVEEGVQIFNSMSRDHLVEPEAEHYTC 722
Query: 564 MVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSH 623
+VD+ RAG LE+A I+ MPM+ + W LA R++ NVE+ + +AK L + P+
Sbjct: 723 VVDIYSRAGCLEEAYGFIQRMPMEPTAIAWKAFLAGCRVYKNVELAKISAKKLFEIDPNG 782
Query: 624 GPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
+ V L NI A W +A IRK M++ G+ + PG S
Sbjct: 783 SANYVTLFNILVTAKLWSEASKIRKLMKERGITKTPGCS 821
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 151/701 (21%), Positives = 279/701 (39%), Gaps = 170/701 (24%)
Query: 9 VFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLY 68
++ S +A D + + A + C+A + +Q H + G+ S+ I N+ I+ Y
Sbjct: 27 IYTSSRARGIKPDKPVFMAVA-KACAASRDALKVKQFHDDATRCGVMSDVSIGNAFIHAY 85
Query: 69 AKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIM 128
KC + A+ +FD D V N + + Y+
Sbjct: 86 GKCKCVEGARRVFDDLVARDVVTWNSLSACYVN--------------------------C 119
Query: 129 GFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDG 188
GF Q + L VFR M + V N +T++S++ L + + +HG V++ +
Sbjct: 120 GFPQ-----QGLNVFRKMGLNKVKANPLTVSSILPGCSDLQDLKSGKEIHGFVVRHGMVE 174
Query: 189 FVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIP 248
V +S+ +N Y C + EA+++ F+ +P
Sbjct: 175 DVFVSSAFVNFYAKCLCVREAQTV-------------------------------FDLMP 203
Query: 249 SKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQ 308
+DVV+W ++ Y+ + L ++R M+ DG+ P+ V + ++SAC G
Sbjct: 204 HRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACSDLQDLKSGKA 263
Query: 309 IHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNAL--------- 359
IH +K G F+ +++ Y +C + A+ F+L ++ +WN+L
Sbjct: 264 IHGFALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMPHRNVITWNSLASCYVNCGF 323
Query: 360 -----------------------------------------IAGF-IRNGMIED------ 371
I GF +++GM+ED
Sbjct: 324 PQKGLNVFREMGLNGVKPDPMAMSSILPACSQLKDLKSGKTIHGFAVKHGMVEDVFVCTA 383
Query: 372 -------------ARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPN 418
A+ +F+ M R+V +W+++ S Y P L +F MV GVKP+
Sbjct: 384 LVNLYANCLCVREAQTVFDLMPHRNVVTWNSLSSCYVNCGFPQKGLNVFREMVLNGVKPD 443
Query: 419 EITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFY 478
+TM+S+ A + LK G+ H + + + + + + A++ +YAKC + A VF
Sbjct: 444 LVTMLSILHACSDLQDLKSGKVIHGFAVRHGMVEDVFVCNALLSLYAKCVCVREAQVVFD 503
Query: 479 HIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLV 538
I R V+ WN I+ + + L ++S + + +K + IT+ V+ C +
Sbjct: 504 LIPHR--EVASWNGILTAYFTNKEYEKGLYMFSQMNRDEVKADEITWSVVIGGCVKNSRI 561
Query: 539 DLGERYFKSMK---------SVYNV-------------------------EPDLKHYGCM 564
+ F+ M+ ++Y++ + DL +
Sbjct: 562 EEAMEIFRKMQTMGFKPDETTIYSILRACSLSECLRMGKEIHCYVFRHWKDWDLARTNAL 621
Query: 565 VDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGN 605
VD+ + G L + V MP+K DV W T++ A+ +HGN
Sbjct: 622 VDMYAKCGGLSLSRNVFDMMPIK-DVFSWNTMIFANGMHGN 661
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 119/517 (23%), Positives = 229/517 (44%), Gaps = 74/517 (14%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+A+ S L CS + G+ IH K G+ + F+ +L+NLYA C + +A+++FD
Sbjct: 344 MAMSSILPACSQLKDLKSGKTIHGFAVKHGMVEDVFVCTALVNLYANCLCVREAQTVFDL 403
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
+ V N + S Y+ GF Q + L VF
Sbjct: 404 MPHRNVVTWNSLSSCYVN--------------------------CGFPQ-----KGLNVF 432
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
R+M + GV P+ VT+ S++ + L + +++HG ++ + V + LL++Y C
Sbjct: 433 REMVLNGVKPDLVTMLSILHACSDLQDLKSGKVIHGFAVRHGMVEDVFVCNALLSLYAKC 492
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDV----VSWGTMI 259
+ EA+ +FD + R + SWN +L + E +F ++ +V ++W +I
Sbjct: 493 VCVREAQVVFDLIPHREVASWNGILTAYFTNKEYEKGLYMFSQMNRDEVKADEITWSVVI 552
Query: 260 DGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFD 319
G ++ R+ EA+ ++R M G P++ I ++ AC + G +IH + + D
Sbjct: 553 GGCVKNSRIEEAMEIFRKMQTMGFKPDETTIYSILRACSLSECLRMGKEIHCYVFRHWKD 612
Query: 320 CYDFIQA-TIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNN 378
+D + ++ YA CG ++L+R F++ + SWN +I NGM + ++
Sbjct: 613 -WDLARTNALVDMYAKCGGLSLSRNVFDMMPIKDVFSWNTMI---FANGMHGNGKE---- 664
Query: 379 MQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG 438
AL LF M+ + VKP+ T V A + S ++EG
Sbjct: 665 ------------------------ALSLFEKMLLSMVKPDSATFTCVLSACSHSMLVEEG 700
Query: 439 -RWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGL 497
+ + ++ + ++D+Y++ G + A+ + T+++ W A + G
Sbjct: 701 VQIFNSMSRDHLVEPEAEHYTCVVDIYSRAGCLEEAYGFIQRMPMEPTAIA-WKAFLAGC 759
Query: 498 AMHGD---ANLTLKIYSDLEKRNIKLNSITFIGVLST 531
++ + A ++ K +++ N N +T +L T
Sbjct: 760 RVYKNVELAKISAKKLFEIDP-NGSANYVTLFNILVT 795
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 96/472 (20%), Positives = 188/472 (39%), Gaps = 92/472 (19%)
Query: 138 EALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLL 197
EA++++ R G+ P++ +V + + + H + + V I +
Sbjct: 23 EAIKIYTSSRARGIKPDKPVFMAVAKACAASRDALKVKQFHDDATRCGVMSDVSIGNAFI 82
Query: 198 NMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGT 257
+ Y C + AR +FD++ R++V+WN + + G +
Sbjct: 83 HAYGKCKCVEGARRVFDDLVARDVVTWNSLSACYVNCGFPQ------------------- 123
Query: 258 MIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAG 317
+ L ++R M + + N + + ++ C G +IH +V+ G
Sbjct: 124 ------------QGLNVFRKMGLNKVKANPLTVSSILPGCSDLQDLKSGKEIHGFVVRHG 171
Query: 318 FDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFN 377
F+ + ++FYA C + A+ F+L + +WN+L + ++ G
Sbjct: 172 MVEDVFVSSAFVNFYAKCLCVREAQTVFDLMPHRDVVTWNSLSSCYVNCGF--------- 222
Query: 378 NMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKE 437
P L +F MV GVKP+ +T+ + A + LK
Sbjct: 223 ----------------------PQKGLNVFREMVLDGVKPDPVTVSCILSACSDLQDLKS 260
Query: 438 GRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAII--- 494
G+ H + L + + N +S A++++Y C + A VF + R +V WN++
Sbjct: 261 GKAIHGFALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMPHR--NVITWNSLASCY 318
Query: 495 --CGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVY 552
CG G L ++ ++ +K + + +L C + L DL KS K+++
Sbjct: 319 VNCGFPQKG-----LNVFREMGLNGVKPDPMAMSSILPAC--SQLKDL-----KSGKTIH 366
Query: 553 NVEPDLKH------YGC--MVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTL 596
+KH + C +V+L + +A+ V MP + +VV W +L
Sbjct: 367 GFA--VKHGMVEDVFVCTALVNLYANCLCVREAQTVFDLMPHR-NVVTWNSL 415
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 114/268 (42%), Gaps = 38/268 (14%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E + S LR CS + G++IH +F+ + + N+L+++YAKCG +S +++
Sbjct: 580 ETTIYSILRACSLSECLRMGKEIHCYVFRHWKDWDLARTNALVDMYAKCGGLSLSRN--- 636
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
VFD PIK S+ +MI + +EAL +
Sbjct: 637 ----------------------------VFDMMPIKDVFSWNTMIFANGMHGNGKEALSL 668
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWE-CRMLHGLVIKLMIDGFVIISTNLLNMYC 201
F M + V P+ T V+S+ H + E ++ + + +++ T ++++Y
Sbjct: 669 FEKMLLSMVKPDSATFTCVLSACSHSMLVEEGVQIFNSMSRDHLVEPEAEHYTCVVDIYS 728
Query: 202 VCSSLVEARSLFDEMK-ERNIVSWNVMLNGFAKAGLVEL----ARELFERIPSKDVVSWG 256
L EA M E ++W L G VEL A++LFE P+ ++
Sbjct: 729 RAGCLEEAYGFIQRMPMEPTAIAWKAFLAGCRVYKNVELAKISAKKLFEIDPNGS-ANYV 787
Query: 257 TMIDGYLQVERLSEALTMYRAMLCDGIA 284
T+ + + + SEA + + M GI
Sbjct: 788 TLFNILVTAKLWSEASKIRKLMKERGIT 815
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 88/208 (42%), Gaps = 26/208 (12%)
Query: 400 PNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAA 459
PN A++++ G+KP++ ++V A A+S + + H+ + + ++ A
Sbjct: 21 PNEAIKIYTSSRARGIKPDKPVFMAVAKACAASRDALKVKQFHDDATRCGVMSDVSIGNA 80
Query: 460 IIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNA-----IICGLAMHGDANLTLKIYSDLE 514
I Y KC + A VF + R V WN+ + CG G L ++ +
Sbjct: 81 FIHAYGKCKCVEGARRVFDDLVAR--DVVTWNSLSACYVNCGFPQQG-----LNVFRKMG 133
Query: 515 KRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSV------YNVEPDLKHYGCMVDLL 568
+K N +T +L C + L DL KS K + + + D+ V+
Sbjct: 134 LNKVKANPLTVSSILPGC--SDLQDL-----KSGKEIHGFVVRHGMVEDVFVSSAFVNFY 186
Query: 569 GRAGQLEDAEEVIRSMPMKADVVIWGTL 596
+ + +A+ V MP + DVV W +L
Sbjct: 187 AKCLCVREAQTVFDLMPHR-DVVTWNSL 213
>gi|357477865|ref|XP_003609218.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510273|gb|AES91415.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1134
Score = 295 bits (756), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 193/628 (30%), Positives = 305/628 (48%), Gaps = 98/628 (15%)
Query: 41 QGQQIHSLIFKSGL-ESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGY 99
+GQ++H+ +F+SGL ++ I N+L+N+Y KC I A S+F + D V+ N MISG
Sbjct: 473 KGQEVHAYLFRSGLVDARISIGNALVNMYGKCTAIDNACSVFQLMPSKDTVSWNSMISGL 532
Query: 100 IRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLA 159
N+R EA+ F M+ G++P+ ++
Sbjct: 533 DHNERF-------------------------------EEAVSCFHTMKRNGMVPSNFSVI 561
Query: 160 SVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKER 219
S +SS LG + R +HG K +D V +S LL +Y S+ E + +F +M E
Sbjct: 562 STLSSCSSLGWLTLGRQIHGEGFKWGLDLDVSVSNALLTLYAETDSINECQKVFFQMPEY 621
Query: 220 NIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAML 279
+ VSWN + AK L +AL + M+
Sbjct: 622 DQVSWNSFIGALAKYEASVL------------------------------QALKYFLEMM 651
Query: 280 CDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRIN 339
G PN V +++++A G G QIH++I+K + I+ ++ FY C ++
Sbjct: 652 QAGWRPNRVTFINILAAVSSFSVLGLGHQIHALILKYSVADDNAIENALLAFYGKCEQME 711
Query: 340 LARLQF-ELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNE 398
+ F + + SWN++I+G++ +G++ A L M +R
Sbjct: 712 DCEIIFSRMSERRDEVSWNSMISGYLHSGILHKAMDLVWPMMQR---------------- 755
Query: 399 QPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSA 458
G K + T +V A AS TL+ G H + + + + +
Sbjct: 756 ---------------GQKLDGFTFATVLSACASVATLERGMEVHACAVRACLESDVVVGS 800
Query: 459 AIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNI 518
A++DMYAKCG I+ A F + R ++ WN++I G A HG LKI++ +++
Sbjct: 801 ALVDMYAKCGKIDYASRFFELMPVR--NIYSWNSMISGYARHGHGQKALKIFTRMKQHGQ 858
Query: 519 KLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAE 578
+ +TF+GVLS C H GLVD G ++FKSM VY + P ++H+ CMVDLLGRAG ++ E
Sbjct: 859 SPDHVTFVGVLSACSHVGLVDEGYKHFKSMGEVYGLSPRIEHFSCMVDLLGRAGDVKKIE 918
Query: 579 EVIRSMPMKADVVIWGTLLAA-SRIHG-NVEVGERAAKSLAGLQPSHGPSRVLLSNIYAD 636
+ I++MPM +++IW T+L A R +G N E+G+RAAK L L+P + + VLLSN++A
Sbjct: 919 DFIKTMPMDPNILIWRTVLGACCRANGRNTELGQRAAKMLIELEPQNAVNYVLLSNMHAA 978
Query: 637 AGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
G WED R MR +K+ G S V
Sbjct: 979 GGNWEDVVEARLAMRKAAVKKDAGCSWV 1006
Score = 153 bits (386), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 144/619 (23%), Positives = 276/619 (44%), Gaps = 111/619 (17%)
Query: 16 NLQNSDYEL-ALVSALRYCS-AHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGL 73
NL+ ++Y L +LV+A CS A + +Q+ + I KSG + ++ ++L+N +A+ GL
Sbjct: 344 NLRPNEYTLCSLVTAA--CSLADCGLVLLEQMLTRIEKSGFLRDLYVGSALVNGFARYGL 401
Query: 74 ISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQN 133
+ AK +F ++++D+ V+ +++G A+
Sbjct: 402 MDCAKMIF---------------------------KQMYDRNA----VTMNGLMVGLARQ 430
Query: 134 DCWREALEVFRDMRILGVIPNE--VTLASVISSSVHLG-GIWECRMLHGLVIKL-MIDGF 189
EA +VF++M+ L I +E V L S + +L G + + +H + + ++D
Sbjct: 431 HQGEEAAKVFKEMKDLVEINSESLVVLLSTFTEFSNLKEGKRKGQEVHAYLFRSGLVDAR 490
Query: 190 VIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPS 249
+ I L+NMY C+++ A S+F M ++ VSWN
Sbjct: 491 ISIGNALVNMYGKCTAIDNACSVFQLMPSKDTVSWN------------------------ 526
Query: 250 KDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQI 309
+MI G ER EA++ + M +G+ P++ ++ +S+C G QI
Sbjct: 527 -------SMISGLDHNERFEEAVSCFHTMKRNGMVPSNFSVISTLSSCSSLGWLTLGRQI 579
Query: 310 HSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMI 369
H K G D ++ NAL+ + I
Sbjct: 580 HGEGFKWGLDL-------------------------------DVSVSNALLTLYAETDSI 608
Query: 370 EDARQLFNNMQKRDVYSWSAMISGYAQNEQPNM-ALELFHGMVDAGVKPNEITMVSVFCA 428
+ +++F M + D SW++ I A+ E + AL+ F M+ AG +PN +T +++ A
Sbjct: 609 NECQKVFFQMPEYDQVSWNSFIGALAKYEASVLQALKYFLEMMQAGWRPNRVTFINILAA 668
Query: 429 IASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVS 488
++S L G H +L S+ ++ + A++ Y KC + +F + +R VS
Sbjct: 669 VSSFSVLGLGHQIHALILKYSVADDNAIENALLAFYGKCEQMEDCEIIFSRMSERRDEVS 728
Query: 489 PWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLG-ERYFKS 547
WN++I G G + + + + +R KL+ TF VLS C ++ G E + +
Sbjct: 729 -WNSMISGYLHSGILHKAMDLVWPMMQRGQKLDGFTFATVLSACASVATLERGMEVHACA 787
Query: 548 MKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVE 607
+++ +E D+ +VD+ + G+++ A MP++ ++ W ++++ HG+
Sbjct: 788 VRAC--LESDVVVGSALVDMYAKCGKIDYASRFFELMPVR-NIYSWNSMISGYARHGH-- 842
Query: 608 VGERAAKSLAGLQPSHGPS 626
G++A K ++ HG S
Sbjct: 843 -GQKALKIFTRMK-QHGQS 859
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 149/611 (24%), Positives = 264/611 (43%), Gaps = 96/611 (15%)
Query: 40 SQGQQIHSLIFKSGLESNTFIQNSL-INLYAKCGLISQAKSMFDSCSTLDPVACNIMISG 98
SQ QQ+ S + S+ + N L + LY K G T D CN +I+
Sbjct: 138 SQLQQLDSEFDRYKTSSSLYDANHLHLQLY-KTGF------------TDDVFFCNTLINI 184
Query: 99 YIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTL 158
Y+R L AR++FD+ P K VS++ +I G+ QN EA +F+ + G++PN +
Sbjct: 185 YVRIGNLVSARKLFDEMPQKNLVSWSCLISGYTQNRMPDEACSLFKGVISSGLLPNHFAV 244
Query: 159 ASVISSSVHLG--GIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCS-SLVEARSLFDE 215
S + + G GI +H + KL +I+S L++MY CS S+ +A +FDE
Sbjct: 245 GSALRACQQCGSTGIKLGMQIHAFICKLPCVSDMILSNVLMSMYSDCSGSIDDAHRVFDE 304
Query: 216 MKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMY 275
+K RN V+WN +++ + + G D VS A ++
Sbjct: 305 IKFRNSVTWNSIISVYCRRG---------------DAVS----------------AFKLF 333
Query: 276 RAMLCDGIA----PNDVMIVDLISACGRAMAFGEGL--QIHSIIVKAGFDCYDFIQATII 329
M +G+ PN+ + L++A G L Q+ + I K+GF
Sbjct: 334 SVMQMEGVELNLRPNEYTLCSLVTAACSLADCGLVLLEQMLTRIEKSGF----------- 382
Query: 330 HFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSA 389
++D +AL+ GF R G+++ A+ +F M R+ + +
Sbjct: 383 -------------------LRDLYVG-SALVNGFARYGLMDCAKMIFKQMYDRNAVTMNG 422
Query: 390 MISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRW----AHEYV 445
++ G A+ Q A ++F M D V+ N ++V + LKEG+ H Y+
Sbjct: 423 LMVGLARQHQGEEAAKVFKEMKDL-VEINSESLVVLLSTFTEFSNLKEGKRKGQEVHAYL 481
Query: 446 LNNS-ITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDAN 504
+ + ++ A+++MY KC +I+ A VF + + T WN++I GL +
Sbjct: 482 FRSGLVDARISIGNALVNMYGKCTAIDNACSVFQLMPSKDT--VSWNSMISGLDHNERFE 539
Query: 505 LTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCM 564
+ + +++ + ++ + I LS+C G + LG R + ++ D+ +
Sbjct: 540 EAVSCFHTMKRNGMVPSNFSVISTLSSCSSLGWLTLG-RQIHGEGFKWGLDLDVSVSNAL 598
Query: 565 VDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHG 624
+ L + + ++V MP + D V W + + A + V + L +Q
Sbjct: 599 LTLYAETDSINECQKVFFQMP-EYDQVSWNSFIGALAKY-EASVLQALKYFLEMMQAGWR 656
Query: 625 PSRVLLSNIYA 635
P+RV NI A
Sbjct: 657 PNRVTFINILA 667
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 134/590 (22%), Positives = 258/590 (43%), Gaps = 108/590 (18%)
Query: 23 ELALVSALRYCS--AHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSM 80
A+ SALR C + G QIH+ I K S+ + N L+++Y+ C
Sbjct: 241 HFAVGSALRACQQCGSTGIKLGMQIHAFICKLPCVSDMILSNVLMSMYSDC--------- 291
Query: 81 FDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREAL 140
SG I +DA VFD+ + V++ S+I + + A
Sbjct: 292 ----------------SGSI-----DDAHRVFDEIKFRNSVTWNSIISVYCRRGDAVSAF 330
Query: 141 EVFRDMRILGV----IPNEVTLASVISSSVHLGGIWECRM--LHGLVIKLMIDGFVIIST 194
++F M++ GV PNE TL S+++++ L +C + L ++ ++ GF+
Sbjct: 331 KLFSVMQMEGVELNLRPNEYTLCSLVTAACSLA---DCGLVLLEQMLTRIEKSGFL---- 383
Query: 195 NLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVS 254
R++ + ++NGFA+ GL++ A+ +F+++ ++ V+
Sbjct: 384 ------------------------RDLYVGSALVNGFARYGLMDCAKMIFKQMYDRNAVT 419
Query: 255 WGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEG----LQIH 310
++ G + + EA +++ M D + N +V L+S EG ++H
Sbjct: 420 MNGLMVGLARQHQGEEAAKVFKEMK-DLVEINSESLVVLLSTFTEFSNLKEGKRKGQEVH 478
Query: 311 SIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIE 370
+ + ++G + I+ NAL+ + + I+
Sbjct: 479 AYLFRSGL------------------------------VDARISIGNALVNMYGKCTAID 508
Query: 371 DARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIA 430
+A +F M +D SW++MISG NE+ A+ FH M G+ P+ +++S + +
Sbjct: 509 NACSVFQLMPSKDTVSWNSMISGLDHNERFEEAVSCFHTMKRNGMVPSNFSVISTLSSCS 568
Query: 431 SSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPW 490
S G L GR H + L+ ++S A++ +YA+ SIN +VF+ + + W
Sbjct: 569 SLGWLTLGRQIHGEGFKWGLDLDVSVSNALLTLYAETDSINECQKVFFQMPEYDQ--VSW 626
Query: 491 NAIICGLAMHGDANL-TLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMK 549
N+ I LA + + L LK + ++ + + N +TFI +L+ ++ LG + ++
Sbjct: 627 NSFIGALAKYEASVLQALKYFLEMMQAGWRPNRVTFINILAAVSSFSVLGLGHQ-IHALI 685
Query: 550 SVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAA 599
Y+V D ++ G+ Q+ED E + M + D V W ++++
Sbjct: 686 LKYSVADDNAIENALLAFYGKCEQMEDCEIIFSRMSERRDEVSWNSMISG 735
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 114/520 (21%), Positives = 214/520 (41%), Gaps = 107/520 (20%)
Query: 8 SVFNSQKAN-LQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLIN 66
S F++ K N + S++ +++S L CS+ ++ G+QIH FK GL+ + + N+L+
Sbjct: 543 SCFHTMKRNGMVPSNF--SVISTLSSCSSLGWLTLGRQIHGEGFKWGLDLDVSVSNALLT 600
Query: 67 LYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSM 126
LYA+ D +N+ ++VF + P VS+ S
Sbjct: 601 LYAE-------------------------------TDSINECQKVFFQMPEYDQVSWNSF 629
Query: 127 IMGFAQNDCW-REALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLM 185
I A+ + +AL+ F +M G PN VT +++++ + +H L++K
Sbjct: 630 IGALAKYEASVLQALKYFLEMMQAGWRPNRVTFINILAAVSSFSVLGLGHQIHALILKYS 689
Query: 186 IDGFVIISTNLLNMYCVCSSLVEARSLFDEMKE-RNIVSWNVMLNGFAKAGLVELARELF 244
+ I LL Y C + + +F M E R+ VSWN M++G+ +G++ A +L
Sbjct: 690 VADDNAIENALLAFYGKCEQMEDCEIIFSRMSERRDEVSWNSMISGYLHSGILHKAMDLV 749
Query: 245 ERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFG 304
+ + G +DG+ ++SAC
Sbjct: 750 WPMMQR-----GQKLDGF--------------------------TFATVLSACASVATLE 778
Query: 305 EGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFI 364
G+++H+ V+A + + + ++ YA CG+I+ A FEL +I SWN++I+G+
Sbjct: 779 RGMEVHACAVRACLESDVVVGSALVDMYAKCGKIDYASRFFELMPVRNIYSWNSMISGYA 838
Query: 365 RNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVS 424
R+G + A ++F M++ G P+ +T V
Sbjct: 839 RHGHGQKALKIFTRMKQH-------------------------------GQSPDHVTFVG 867
Query: 425 VFCAIASSGTLKEGRWAHEYVLNNSITLNDNLS--AAIIDMYAKCGSINTAFEVFYHIRD 482
V A + G + EG + H + L+ + + ++D+ + G + E F
Sbjct: 868 VLSACSHVGLVDEG-YKHFKSMGEVYGLSPRIEHFSCMVDLLGRAGDVKK-IEDFIKTMP 925
Query: 483 RTTSVSPWNAIICGLAMHGDANLTL-----KIYSDLEKRN 517
++ W ++ N L K+ +LE +N
Sbjct: 926 MDPNILIWRTVLGACCRANGRNTELGQRAAKMLIELEPQN 965
>gi|414883627|tpg|DAA59641.1| TPA: hypothetical protein ZEAMMB73_113196 [Zea mays]
Length = 637
Score = 295 bits (756), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 150/358 (41%), Positives = 220/358 (61%), Gaps = 3/358 (0%)
Query: 306 GLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQF-ELGIKDHIASWNALIAGFI 364
G +H++ VKAG +++ IHFY CG + R F EL I + +WNA++AG++
Sbjct: 151 GTHVHALAVKAGAAGDLYVRNAQIHFYGVCGDVAAMRKVFDELPIVRDVVTWNAVLAGYV 210
Query: 365 RNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVS 424
R GM+ AR++F+ M RD SWS +I GY + +P +AL +F MV GVK NE +V+
Sbjct: 211 RAGMVGVAREVFDGMPVRDEVSWSTVIGGYVKEGEPEVALGVFKNMVAQGVKANEAAIVT 270
Query: 425 VFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRT 484
A A G L++G++ HE V +T++ NL AA+IDMY+KCGS+ A EVF + R
Sbjct: 271 ALSAAAQLGLLEQGKFVHEVVKRVGMTMSVNLGAALIDMYSKCGSVAAAKEVFDAMPRR- 329
Query: 485 TSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERY 544
V WN++ICGLA HG + ++++ SITF+GVL+ C GLVD G RY
Sbjct: 330 -DVFAWNSMICGLATHGLGHDAVQLFEKFVSEGFCPTSITFVGVLNACSRTGLVDEGRRY 388
Query: 545 FKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHG 604
FK M Y++E +++HYGCMVDLL RAG +++A E+I M + D V+WGT+L+A + HG
Sbjct: 389 FKLMAEKYDIESEMEHYGCMVDLLSRAGLVQEAVELIEGMRIPPDPVLWGTILSACKRHG 448
Query: 605 NVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
V++G L L P+H VLL++IYA A +W++ +RK M + G + G+S
Sbjct: 449 LVDLGITVGNKLIELDPAHDGYYVLLASIYAKAKKWDEVRKVRKLMSNRGTSKSAGWS 506
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 88/343 (25%), Positives = 158/343 (46%), Gaps = 42/343 (12%)
Query: 177 LHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMK-ERNIVSWNVMLNGFAKAG 235
+H L +K G + + ++ Y VC + R +FDE+ R++V+WN +L G+ +AG
Sbjct: 154 VHALAVKAGAAGDLYVRNAQIHFYGVCGDVAAMRKVFDELPIVRDVVTWNAVLAGYVRAG 213
Query: 236 LVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLIS 295
+V +ARE+F+ +P +D VSW T+I GY++ AL +++ M+ G+ N+ IV +S
Sbjct: 214 MVGVAREVFDGMPVRDEVSWSTVIGGYVKEGEPEVALGVFKNMVAQGVKANEAAIVTALS 273
Query: 296 ACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIAS 355
A + +G +H ++ + G + A +I Y+ CG + A+ F+ + + +
Sbjct: 274 AAAQLGLLEQGKFVHEVVKRVGMTMSVNLGAALIDMYSKCGSVAAAKEVFDAMPRRDVFA 333
Query: 356 WNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGV 415
WN++I G +G+ DA QLF V G
Sbjct: 334 WNSMICGLATHGLGHDAVQLFEK-------------------------------FVSEGF 362
Query: 416 KPNEITMVSVFCAIASSGTLKEGR-----WAHEYVLNNSITLNDNLSAAIIDMYAKCGSI 470
P IT V V A + +G + EGR A +Y + + + ++D+ ++ G +
Sbjct: 363 CPTSITFVGVLNACSRTGLVDEGRRYFKLMAEKYDIESEM----EHYGCMVDLLSRAGLV 418
Query: 471 NTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDL 513
A E+ +R V W I+ HG +L + + + L
Sbjct: 419 QEAVELIEGMRIPPDPVL-WGTILSACKRHGLVDLGITVGNKL 460
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/376 (23%), Positives = 169/376 (44%), Gaps = 74/376 (19%)
Query: 42 GQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTL-DPVACNIMISGYI 100
G +H+L K+G + +++N+ I+ Y CG ++ + +FD + D V N +++GY+
Sbjct: 151 GTHVHALAVKAGAAGDLYVRNAQIHFYGVCGDVAAMRKVFDELPIVRDVVTWNAVLAGYV 210
Query: 101 RNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLAS 160
R + AREVFD P++ VS++++I G+ + AL VF++M GV NE + +
Sbjct: 211 RAGMVGVAREVFDGMPVRDEVSWSTVIGGYVKEGEPEVALGVFKNMVAQGVKANEAAIVT 270
Query: 161 VISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERN 220
+S++ LG + + + +H +V ++ + V + L++MY C S+ A+ +FD M R+
Sbjct: 271 ALSAAAQLGLLEQGKFVHEVVKRVGMTMSVNLGAALIDMYSKCGSVAAAKEVFDAMPRRD 330
Query: 221 IVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLC 280
+ +WN M+ G A GL A +LFE+ S
Sbjct: 331 VFAWNSMICGLATHGLGHDAVQLFEKFVS------------------------------- 359
Query: 281 DGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINL 340
+G P + V +++AC R EG + ++ + YD
Sbjct: 360 EGFCPTSITFVGVLNACSRTGLVDEGRRYFKLMAEK----YD------------------ 397
Query: 341 ARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ-KRDVYSWSAMISGYAQNEQ 399
I+ + + ++ R G++++A +L M+ D W ++S +
Sbjct: 398 --------IESEMEHYGCMVDLLSRAGLVQEAVELIEGMRIPPDPVLWGTILSACKR--- 446
Query: 400 PNMALELFHGMVDAGV 415
HG+VD G+
Sbjct: 447 --------HGLVDLGI 454
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 100/239 (41%), Gaps = 64/239 (26%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E A+V+AL + + QG+ +H ++ + G+ + + +LI++Y+KCG ++ AK +FD
Sbjct: 265 EAAIVTALSAAAQLGLLEQGKFVHEVVKRVGMTMSVNLGAALIDMYSKCGSVAAAKEVFD 324
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+ D A N MI G + +DA ++F+K F
Sbjct: 325 AMPRRDVFAWNSMICGLATHGLGHDAVQLFEK---------------FVSE--------- 360
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
G P +T V+++ G + E R KLM + + I
Sbjct: 361 -------GFCPTSITFVGVLNACSRTGLVDEGRRY----FKLMAEKYDI----------- 398
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFE--RIPSKDVVSWGTMI 259
E + + M++ ++AGLV+ A EL E RIP D V WGT++
Sbjct: 399 ---------------ESEMEHYGCMVDLLSRAGLVQEAVELIEGMRIPP-DPVLWGTIL 441
>gi|356502788|ref|XP_003520198.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Glycine max]
Length = 923
Score = 295 bits (756), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 187/650 (28%), Positives = 320/650 (49%), Gaps = 98/650 (15%)
Query: 13 QKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCG 72
Q+ + ++ Y V+AL+ V G IH + KS ++ ++ N+LI +YAKCG
Sbjct: 240 QEVGVASNTY--TFVAALQGVEDPSFVKLGMGIHGAVLKSNHFADVYVANALIAMYAKCG 297
Query: 73 LISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQ 132
R+ DA VF+ + VS+ +++ G Q
Sbjct: 298 -------------------------------RMEDAGRVFESMLCRDYVSWNTLLSGLVQ 326
Query: 133 NDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVII 192
N+ + +AL FRDM+ G P++V++ ++I++S G + + + +H I+ +D + I
Sbjct: 327 NELYSDALNYFRDMQNSGQKPDQVSVLNLIAASGRSGNLLKGKEVHAYAIRNGLDSNMQI 386
Query: 193 STNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDV 252
L++MY AK V+ FE + KD+
Sbjct: 387 GNTLVDMY-------------------------------AKCCCVKYMGHAFECMHEKDL 415
Query: 253 VSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSI 312
+SW T+I GY Q E EA+ ++R + G+ + +MI ++ AC
Sbjct: 416 ISWTTIIAGYAQNEFHLEAINLFRKVQVKGMDVDPMMIGSVLRAC--------------- 460
Query: 313 IVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDA 372
+G +FI+ IH Y F+ + D I NA++ + G I+ A
Sbjct: 461 ---SGLKSRNFIRE--IHGYV-----------FKRDLAD-IMLQNAIVNVYGEVGHIDYA 503
Query: 373 RQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASS 432
R+ F +++ +D+ SW++MI+ N P ALELF+ + ++P+ I ++S A A+
Sbjct: 504 RRAFESIRSKDIVSWTSMITCCVHNGLPVEALELFYSLKQTNIQPDSIAIISALSATANL 563
Query: 433 GTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNA 492
+LK+G+ H +++ L ++++++DMYA CG++ + ++F+ ++ R + W +
Sbjct: 564 SSLKKGKEIHGFLIRKGFFLEGPIASSLVDMYACCGTVENSRKMFHSVKQRDLIL--WTS 621
Query: 493 IICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVY 552
+I MHG N + ++ + +N+ + ITF+ +L C H+GL+ G+R+F+ MK Y
Sbjct: 622 MINANGMHGCGNKAIALFKKMTDQNVIPDHITFLALLYACSHSGLMVEGKRFFEIMKYGY 681
Query: 553 NVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERA 612
+EP +HY CMVDLL R+ LE+A +R+MP+K IW LL A IH N E+GE A
Sbjct: 682 QLEPWPEHYACMVDLLSRSNSLEEAYHFVRNMPIKPSSEIWCALLGACHIHSNKELGELA 741
Query: 613 AKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
AK L + L+SNI+A GRW D +R M+ G+K+ PG S
Sbjct: 742 AKELLQSDTENSGKYALISNIFAADGRWNDVEEVRLRMKGNGLKKNPGCS 791
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 157/652 (24%), Positives = 270/652 (41%), Gaps = 151/652 (23%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
L C A A+ QGQQ+H+L+ KS L + F+ L+ +Y KCG
Sbjct: 53 LDLCVAAKALPQGQQLHALLLKSHLSA--FLATKLVLMYGKCG----------------- 93
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
L DA +VFD+ + S+ +++ F + + EA+E+++DMR+L
Sbjct: 94 --------------SLRDAVKVFDEMSERTIFSWNALMGAFVSSGKYLEAIELYKDMRVL 139
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRM---LHGLVIKLMIDGFVIISTNLLNMYCVCSSL 206
GV + T SV+ + G + E R+ +HG+ +K FV + L+ MY C L
Sbjct: 140 GVAIDACTFPSVLKAC---GALGESRLGAEIHGVAVKCGYGEFVFVCNALIAMYGKCGDL 196
Query: 207 ---------------------------------VEARSLFDEMKERNIVS---------- 223
+EA SLF M+E + S
Sbjct: 197 GGARVLFDGIMMEKEDTVSWNSIISAHVAEGNCLEALSLFRRMQEVGVASNTYTFVAALQ 256
Query: 224 -----------------------------WNVMLNGFAKAGLVELARELFERIPSKDVVS 254
N ++ +AK G +E A +FE + +D VS
Sbjct: 257 GVEDPSFVKLGMGIHGAVLKSNHFADVYVANALIAMYAKCGRMEDAGRVFESMLCRDYVS 316
Query: 255 WGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIV 314
W T++ G +Q E S+AL +R M G P+ V +++LI+A GR+ +G ++H+ +
Sbjct: 317 WNTLLSGLVQNELYSDALNYFRDMQNSGQKPDQVSVLNLIAASGRSGNLLKGKEVHAYAI 376
Query: 315 KAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQ 374
+ G D I T++ YA C + FE + + SW +IAG
Sbjct: 377 RNGLDSNMQIGNTLVDMYAKCCCVKYMGHAFECMHEKDLISWTTIIAG------------ 424
Query: 375 LFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGT 434
YAQNE A+ LF + G+ + + + SV A + +
Sbjct: 425 -------------------YAQNEFHLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKS 465
Query: 435 LKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAII 494
R H YV + + L AI+++Y + G I+ A F IR + + W ++I
Sbjct: 466 RNFIREIHGYVFKRDLA-DIMLQNAIVNVYGEVGHIDYARRAFESIRSK--DIVSWTSMI 522
Query: 495 CGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERY--FKSMKSVY 552
+G L+++ L++ NI+ +SI I LS + + G+ F K +
Sbjct: 523 TCCVHNGLPVEALELFYSLKQTNIQPDSIAIISALSATANLSSLKKGKEIHGFLIRKGFF 582
Query: 553 NVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHG 604
P +VD+ G +E++ ++ S+ + D+++W +++ A+ +HG
Sbjct: 583 LEGPIAS---SLVDMYACCGTVENSRKMFHSVKQR-DLILWTSMINANGMHG 630
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 125/253 (49%), Gaps = 39/253 (15%)
Query: 5 HFHSVFNSQKANLQNSDYELALV-SALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNS 63
H ++ +K ++ D + ++ S LR CS + + ++IH +FK L ++ +QN+
Sbjct: 431 HLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSRNFIREIHGYVFKRDL-ADIMLQNA 489
Query: 64 LINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSY 123
++N+Y + G I A+ F+S + D VS+
Sbjct: 490 IVNVYGEVGHIDYARRAFESIRSKD-------------------------------IVSW 518
Query: 124 TSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIK 183
TSMI N EALE+F ++ + P+ + + S +S++ +L + + + +HG +I+
Sbjct: 519 TSMITCCVHNGLPVEALELFYSLKQTNIQPDSIAIISALSATANLSSLKKGKEIHGFLIR 578
Query: 184 LMIDGFVI---ISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELA 240
GF + I+++L++MY C ++ +R +F +K+R+++ W M+N G A
Sbjct: 579 ---KGFFLEGPIASSLVDMYACCGTVENSRKMFHSVKQRDLILWTSMINANGMHGCGNKA 635
Query: 241 RELFERIPSKDVV 253
LF+++ ++V+
Sbjct: 636 IALFKKMTDQNVI 648
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/349 (23%), Positives = 145/349 (41%), Gaps = 41/349 (11%)
Query: 293 LISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDH 352
L+ C A A +G Q+H++++K+ F+ ++ Y CG +
Sbjct: 52 LLDLCVAAKALPQGQQLHALLLKSHLSA--FLATKLVLMYGKCGSL-------------- 95
Query: 353 IASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVD 412
DA ++F+ M +R ++SW+A++ + + + A+EL+ M
Sbjct: 96 -----------------RDAVKVFDEMSERTIFSWNALMGAFVSSGKYLEAIELYKDMRV 138
Query: 413 AGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINT 472
GV + T SV A + G + G H + + A+I MY KCG +
Sbjct: 139 LGVAIDACTFPSVLKACGALGESRLGAEIHGVAVKCGYGEFVFVCNALIAMYGKCGDLGG 198
Query: 473 AFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTC 532
A +F I WN+II G+ L ++ +++ + N+ TF+ L
Sbjct: 199 ARVLFDGIMMEKEDTVSWNSIISAHVAEGNCLEALSLFRRMQEVGVASNTYTFVAALQGV 258
Query: 533 CHAGLVDLGERYFKS-MKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVV 591
V LG + +KS N D+ ++ + + G++EDA V SM + D V
Sbjct: 259 EDPSFVKLGMGIHGAVLKS--NHFADVYVANALIAMYAKCGRMEDAGRVFESMLCR-DYV 315
Query: 592 IWGTLLAASRIHGNVEVGERAAKSLAGLQPS-HGPSRVLLSNIYADAGR 639
W TLL+ + E+ A +Q S P +V + N+ A +GR
Sbjct: 316 SWNTLLSGLVQN---ELYSDALNYFRDMQNSGQKPDQVSVLNLIAASGR 361
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 74/168 (44%), Gaps = 33/168 (19%)
Query: 2 PLDHFHSVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQ 61
P++ ++ ++ N+Q +A++SAL + ++ +G++IH + + G I
Sbjct: 531 PVEALELFYSLKQTNIQPDS--IAIISALSATANLSSLKKGKEIHGFLIRKGFFLEGPIA 588
Query: 62 NSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCV 121
+SL+++YA CG + ++ MF S D +
Sbjct: 589 SSLVDMYACCGTVENSRKMFHSVKQRD-------------------------------LI 617
Query: 122 SYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLG 169
+TSMI + C +A+ +F+ M VIP+ +T +++ + H G
Sbjct: 618 LWTSMINANGMHGCGNKAIALFKKMTDQNVIPDHITFLALLYACSHSG 665
>gi|359486281|ref|XP_003633424.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g45350, chloroplastic-like [Vitis vinifera]
Length = 704
Score = 295 bits (756), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 190/545 (34%), Positives = 288/545 (52%), Gaps = 44/545 (8%)
Query: 123 YTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVI 182
+ ++I F+ + RE +F M GV ++ + + V+ + LG I E +HGL+
Sbjct: 84 WNAIIKSFSHKEDPREVFVIFNLMLESGVCVDKFSFSLVLKACSRLGLIKEGMQIHGLLG 143
Query: 183 KLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARE 242
K+ I V + L+ +Y C L R LFD M +++ VS+N M++G+ K G+V+ A E
Sbjct: 144 KMEIGSDVFLQNCLMCLYLRCGCLGIVRQLFDRMMKKDSVSFNSMIDGYVKHGMVKSAWE 203
Query: 243 LFERIP--SKDVVSWGTMIDGYLQVE-RLSEALTMYRAMLCDGIAPNDVMIVDLISACGR 299
LF+ +P K ++SW +MI Y + E RL A ++ M P DLIS
Sbjct: 204 LFDVMPMEQKILISWNSMISEYARSEERLKVAWELFEEM------PKK----DLIS---- 249
Query: 300 AMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNAL 359
++I+ CG++ F K + S +
Sbjct: 250 -------------------------WNSMINGCVKCGKMENDHHLFNRMPKRXVVSXANM 284
Query: 360 IAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNE 419
+ G + G I+ AR LF M + DV S +AM++ Y QN +L+ FH M+ + +
Sbjct: 285 VNGHAKLGEIDIARGLFVEMPEMDVISCNAMMARYVQNGYLMESLKNFHDMLSKELFLDN 344
Query: 420 ITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYH 479
T++ AIA G EG H Y+ +N +L++ L A+ID YAKCGSI+ A VF
Sbjct: 345 ATLLITLSAIAQLGHFDEGVALHCYIEDNGFSLSEKLGVALIDTYAKCGSIDNALSVFED 404
Query: 480 IRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVD 539
I ++ S+ WNAI+ GLA+HG + +++ ++EK +K N ITFIGVL+ C HAGLV
Sbjct: 405 IDNK--SIDHWNAILSGLAIHGLGEVAFELFMEMEKLFVKPNDITFIGVLNACNHAGLVK 462
Query: 540 LGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAA 599
G F+ MK V VEP L+HY CMVD+LG+AG +E+ ++ + M ++ + V+W TLL+A
Sbjct: 463 EGLMCFELMKRVDKVEPKLQHYVCMVDILGQAGHVEETKKFVEKMSIEPNDVVWRTLLSA 522
Query: 600 SRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLP 659
R H N +GE AK L + + S VLLSNIYA G W D IR M+ +K++P
Sbjct: 523 CRNHENFTIGEPVAKHLISVDSYNLSSYVLLSNIYAGFGIWNDVHRIRMMMKQRDLKKIP 582
Query: 660 GFSGV 664
G S +
Sbjct: 583 GCSQI 587
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 143/532 (26%), Positives = 228/532 (42%), Gaps = 114/532 (21%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
L+ CS + +G QIH L+ K + S+ F+QN L+ LY +CG + + +FD D
Sbjct: 123 LKACSRLGLIKEGMQIHGLLGKMEIGSDVFLQNCLMCLYLRCGCLGIVRQLFDRMMKKDS 182
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPI--KCCVSYTSMIMGFAQND-CWREALEVFRDM 146
V+ N MI GY+++ + A E+FD P+ K +S+ SMI +A+++ + A E+F +M
Sbjct: 183 VSFNSMIDGYVKHGMVKSAWELFDVMPMEQKILISWNSMISEYARSEERLKVAWELFEEM 242
Query: 147 RILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV-CSS 205
P + ++ W MI+G CV C
Sbjct: 243 ------PKKDLIS------------WNS----------MING------------CVKCGK 262
Query: 206 LVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQV 265
+ LF+ M +R +VS M+NG AK G +++AR LF +P DV+S M+ Y+Q
Sbjct: 263 MENDHHLFNRMPKRXVVSXANMVNGHAKLGEIDIARGLFVEMPEMDVISCNAMMARYVQN 322
Query: 266 ERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQ 325
L E+L + ML + ++ ++ +SA + F EG+ +H I GF + +
Sbjct: 323 GYLMESLKNFHDMLSKELFLDNATLLITLSAIAQLGHFDEGVALHCYIEDNGFSLSEKLG 382
Query: 326 ATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVY 385
+I YA CG I+ A FE I WNA+++G +G+ E A +LF M+K
Sbjct: 383 VALIDTYAKCGSIDNALSVFEDIDNKSIDHWNAILSGLAIHGLGEVAFELFMEMEK---- 438
Query: 386 SWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYV 445
LF VKPN+IT + V A +G +KEG E
Sbjct: 439 --------------------LF-------VKPNDITFIGVLNACNHAGLVKEGLMCFE-- 469
Query: 446 LNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSP-WNAIICGLAMHGDAN 504
+ R V P +C + + G A
Sbjct: 470 ----------------------------------LMKRVDKVEPKLQHYVCMVDILGQAG 495
Query: 505 LTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSV--YNV 554
+ +EK +I+ N + + +LS C + +GE K + SV YN+
Sbjct: 496 HVEETKKFVEKMSIEPNDVVWRTLLSACRNHENFTIGEPVAKHLISVDSYNL 547
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 137/318 (43%), Gaps = 50/318 (15%)
Query: 62 NSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCV 121
NS+IN KCG + +F+ V+ M++G+ + ++ AR +F + P +
Sbjct: 251 NSMINGCVKCGKMENDHHLFNRMPKRXVVSXANMVNGHAKLGEIDIARGLFVEMPEMDVI 310
Query: 122 SYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLV 181
S +M+ + QN E+L+ F DM + + TL +S+ LG E LH +
Sbjct: 311 SCNAMMARYVQNGYLMESLKNFHDMLSKELFLDNATLLITLSAIAQLGHFDEGVALHCYI 370
Query: 182 IKLMIDGFVI---ISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVE 238
+GF + + L++ Y C S+ A S+F+++ ++I WN +L+G A GL E
Sbjct: 371 ED---NGFSLSEKLGVALIDTYAKCGSIDNALSVFEDIDNKSIDHWNAILSGLAIHGLGE 427
Query: 239 LARELFER-----IPSKDVVSWGTM---------IDGYL------QVERLSEALTMYRAM 278
+A ELF + D+ G + +G + +V+++ L Y M
Sbjct: 428 VAFELFMEMEKLFVKPNDITFIGVLNACNHAGLVKEGLMCFELMKRVDKVEPKLQHYVCM 487
Query: 279 L-----------------CDGIAPNDVMIVDLISACGRAMAF--GEGLQIHSIIVKAGFD 319
+ I PNDV+ L+SAC F GE + H I V D
Sbjct: 488 VDILGQAGHVEETKKFVEKMSIEPNDVVWRTLLSACRNHENFTIGEPVAKHLISV----D 543
Query: 320 CYDFIQATII-HFYAACG 336
Y+ ++ + YA G
Sbjct: 544 SYNLSSYVLLSNIYAGFG 561
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 114/252 (45%), Gaps = 25/252 (9%)
Query: 368 MIEDARQLF------NNMQKRD-VYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEI 420
++E AR LF +K+D + W+A+I ++ E P +F+ M+++GV ++
Sbjct: 58 LVEFARYLFMSRHFGRKYRKQDNSFIWNAIIKSFSHKEDPREVFVIFNLMLESGVCVDKF 117
Query: 421 TMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHI 480
+ V A + G +KEG H + I + L ++ +Y +CG + ++F +
Sbjct: 118 SFSLVLKACSRLGLIKEGMQIHGLLGKMEIGSDVFLQNCLMCLYLRCGCLGIVRQLFDRM 177
Query: 481 RDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDL 540
+ SVS +N++I G HG +++ + L I++ ++S +
Sbjct: 178 M-KKDSVS-FNSMIDGYVKHGMVKSAWELFDVMPMEQKIL--ISWNSMISEYARS----- 228
Query: 541 GERYFKSMKSVYNVEP--DLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLA 598
E K ++ P DL + M++ + G++E+ + MP + V
Sbjct: 229 -EERLKVAWELFEEMPKKDLISWNSMINGCVKCGKMENDHHLFNRMPKRXVVS------X 281
Query: 599 ASRIHGNVEVGE 610
A+ ++G+ ++GE
Sbjct: 282 ANMVNGHAKLGE 293
>gi|125555495|gb|EAZ01101.1| hypothetical protein OsI_23130 [Oryza sativa Indica Group]
Length = 766
Score = 295 bits (756), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 192/643 (29%), Positives = 311/643 (48%), Gaps = 95/643 (14%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
+ AL SA+R C+ V G+Q+H+ KS S+ +QN+L+ +Y+K GL+
Sbjct: 152 QFALGSAVRACTELGDVGTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLV-------- 203
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+D +F++ K +S+ S+I GFAQ EAL+V
Sbjct: 204 -----------------------DDGFMLFERIKDKDLISWGSIIAGFAQQGFEMEALQV 240
Query: 143 FRDMRILGVI-PNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYC 201
FR M + G PNE S + +G +HGL IK +D + + +L +MY
Sbjct: 241 FRKMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLDRDLYVGCSLSDMYA 300
Query: 202 VCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDG 261
+ +N+ S AR F RI + D+VSW ++++
Sbjct: 301 ---------------RFKNLDS----------------ARVAFYRIEAPDLVSWNSIVNA 329
Query: 262 YLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCY 321
Y LSEAL ++ M G+ P+ + + L+ AC A G IHS +VK
Sbjct: 330 YSVEGLLSEALVLFSEMRDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVK------ 383
Query: 322 DFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQK 381
LG+ ++ N+L++ + R + A +F+ ++
Sbjct: 384 -------------------------LGLDGDVSVCNSLLSMYARCSDLSSAMDVFHEIKD 418
Query: 382 RDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWA 441
+DV +W+++++ AQ+ P L+LF + + + I++ +V A A G + +
Sbjct: 419 QDVVTWNSILTACAQHNHPEEVLKLFSLLNKSEPSLDRISLNNVLSASAELGYFEMVKQV 478
Query: 442 HEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHG 501
H Y + + LS +ID YAKCGS++ A +F I V W+++I G A G
Sbjct: 479 HAYAFKAGLVDDRMLSNTLIDTYAKCGSLDDAMRLF-EIMGNNRDVFSWSSLIVGYAQFG 537
Query: 502 DANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHY 561
A L ++S + I+ N +TFIGVL+ C G V+ G Y+ M+ Y + P +H
Sbjct: 538 YAKEALDLFSRMRSLGIRPNHVTFIGVLTACSRVGFVNEGCYYYSIMEPEYGIVPTREHC 597
Query: 562 GCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQP 621
C+VDLL RAG+L +A I MP + D+++W TLLAAS++H ++E+G+RAA+ + + P
Sbjct: 598 SCIVDLLARAGKLTEAANFIDQMPFEPDIIMWKTLLAASKMHNDMEMGKRAAEGILNIDP 657
Query: 622 SHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
SH + VLL NIYA +G W + ++K MR G+K+ PG S V
Sbjct: 658 SHSAAYVLLCNIYAASGNWNEFARLKKAMRTSGVKKSPGKSWV 700
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 93/414 (22%), Positives = 180/414 (43%), Gaps = 36/414 (8%)
Query: 220 NIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAML 279
N V N ++ + + + AR++F+ +P+++ VSW ++I ++Q R +AL ++ +ML
Sbjct: 85 NTVLGNHLITMYGRCAAPDSARQVFDEMPARNPVSWASVIAAHVQNGRAGDALGLFSSML 144
Query: 280 CDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRIN 339
G A + + + AC G G Q+H+ +K+ +Q ++ Y+ G ++
Sbjct: 145 RSGTAADQFALGSAVRACTELGDVGTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVD 204
Query: 340 LARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQ 399
+ FE + SW ++IAGF + G +A Q+F M
Sbjct: 205 DGFMLFERIKDKDLISWGSIIAGFAQQGFEMEALQVFRKM-------------------- 244
Query: 400 PNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAA 459
+V+ PNE S F A + G+ + G H + + + + +
Sbjct: 245 ----------IVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKYRLDRDLYVGCS 294
Query: 460 IIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIK 519
+ DMYA+ ++++A FY I + WN+I+ ++ G + L ++S++ ++
Sbjct: 295 LSDMYARFKNLDSARVAFYRI--EAPDLVSWNSIVNAYSVEGLLSEALVLFSEMRDSGLR 352
Query: 520 LNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEE 579
+ IT G+L C + G R S ++ D+ ++ + R L A +
Sbjct: 353 PDGITVRGLLCACVGRDALYHG-RLIHSYLVKLGLDGDVSVCNSLLSMYARCSDLSSAMD 411
Query: 580 VIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNI 633
V + DVV W ++L A H + E + L +PS R+ L+N+
Sbjct: 412 VFHEIK-DQDVVTWNSILTACAQHNHPEEVLKLFSLLNKSEPS--LDRISLNNV 462
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 137/314 (43%), Gaps = 31/314 (9%)
Query: 293 LISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDH 352
L+SAC R + +G ++H +V + D A+L + +H
Sbjct: 50 LVSACSRLRSLPQGRRVHRHLVASSSSSPD------------------AQLAGNTVLGNH 91
Query: 353 IASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVD 412
LI + R + ARQ+F+ M R+ SW+++I+ + QN + AL LF M+
Sbjct: 92 ------LITMYGRCAAPDSARQVFDEMPARNPVSWASVIAAHVQNGRAGDALGLFSSMLR 145
Query: 413 AGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINT 472
+G ++ + S A G + GR H + L + + + A++ MY+K G ++
Sbjct: 146 SGTAADQFALGSAVRACTELGDVGTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVDD 205
Query: 473 AFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDL-EKRNIKLNSITFIGVLST 531
F +F I+D+ + W +II G A G L+++ + + + N F
Sbjct: 206 GFMLFERIKDK--DLISWGSIIAGFAQQGFEMEALQVFRKMIVEGSHHPNEFHFGSAFRA 263
Query: 532 CCHAGLVDLGERYFKSMKSVYNVEPDLKHYGC-MVDLLGRAGQLEDAEEVIRSMPMKADV 590
C G + GE+ + Y ++ DL + GC + D+ R L+ A + D+
Sbjct: 264 CGAVGSWEYGEQ-IHGLSIKYRLDRDL-YVGCSLSDMYARFKNLDSARVAFYRIE-APDL 320
Query: 591 VIWGTLLAASRIHG 604
V W +++ A + G
Sbjct: 321 VSWNSIVNAYSVEG 334
>gi|15231970|ref|NP_187494.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207322|sp|Q9SR82.1|PP219_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g08820
gi|6403507|gb|AAF07847.1|AC010871_23 unknown protein [Arabidopsis thaliana]
gi|12322725|gb|AAG51349.1|AC012562_10 unknown protein; 90102-88045 [Arabidopsis thaliana]
gi|332641162|gb|AEE74683.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 685
Score = 295 bits (755), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 169/554 (30%), Positives = 274/554 (49%), Gaps = 64/554 (11%)
Query: 111 VFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGG 170
+F T Y S+I GF N + E L++F +R G+ + T V+ +
Sbjct: 67 LFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASS 126
Query: 171 IWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNG 230
LH LV+K + V T+LL++Y
Sbjct: 127 RKLGIDLHSLVVKCGFNHDVAAMTSLLSIY------------------------------ 156
Query: 231 FAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMI 290
+ +G + A +LF+ IP + VV+W + GY R EA+ +++ M+ G+ P+ I
Sbjct: 157 -SGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFI 215
Query: 291 VDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIK 350
V ++SAC G I + + F++ T+++ YA CG++
Sbjct: 216 VQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKM------------ 263
Query: 351 DHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGM 410
E AR +F++M ++D+ +WS MI GYA N P +ELF M
Sbjct: 264 -------------------EKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQM 304
Query: 411 VDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSI 470
+ +KP++ ++V + AS G L G W + + N ++ A+IDMYAKCG++
Sbjct: 305 LQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAM 364
Query: 471 NTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLS 530
FEVF ++++ + NA I GLA +G L+ ++ EK I + TF+G+L
Sbjct: 365 ARGFEVFKEMKEKDIVIM--NAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLC 422
Query: 531 TCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADV 590
C HAGL+ G R+F ++ VY ++ ++HYGCMVDL GRAG L+DA +I MPM+ +
Sbjct: 423 GCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNA 482
Query: 591 VIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEM 650
++WG LL+ R+ + ++ E K L L+P + + V LSNIY+ GRW++A +R M
Sbjct: 483 IVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMM 542
Query: 651 RDCGMKRLPGFSGV 664
GMK++PG+S +
Sbjct: 543 NKKGMKKIPGYSWI 556
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 115/516 (22%), Positives = 219/516 (42%), Gaps = 108/516 (20%)
Query: 3 LDHFHSVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQN 62
LD F S+ +K L + LV L+ C+ + G +HSL+ K G +
Sbjct: 96 LDLFLSI---RKHGLYLHGFTFPLV--LKACTRASSRKLGIDLHSLVVKCGFNHDVAAMT 150
Query: 63 SLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVS 122
SL+++Y+ G RLNDA ++FD+ P + V+
Sbjct: 151 SLLSIYSGSG-------------------------------RLNDAHKLFDEIPDRSVVT 179
Query: 123 YTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLG----GIWECRMLH 178
+T++ G+ + REA+++F+ M +GV P+ + V+S+ VH+G G W + +
Sbjct: 180 WTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYME 239
Query: 179 GLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVE 238
+ ++ + FV T L+N+Y C + +ARS+FD M E++IV+W+ M+ G+A +
Sbjct: 240 EM--EMQKNSFV--RTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPK 295
Query: 239 LARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACG 298
E + ++ ML + + P+ IV +S+C
Sbjct: 296 -------------------------------EGIELFLQMLQENLKPDQFSIVGFLSSCA 324
Query: 299 RAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNA 358
A G S+I + F F+ +I YA CG A
Sbjct: 325 SLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCG---------------------A 363
Query: 359 LIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPN 418
+ GF ++F M+++D+ +A ISG A+N ++ +F G+ P+
Sbjct: 364 MARGF----------EVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPD 413
Query: 419 EITMVSVFCAIASSGTLKEG-RWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVF 477
T + + C +G +++G R+ + ++ ++D++ + G ++ A+ +
Sbjct: 414 GSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLI 473
Query: 478 YHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDL 513
+ R ++ W A++ G + D L + +L
Sbjct: 474 CDMPMRPNAIV-WGALLSGCRLVKDTQLAETVLKEL 508
>gi|297847366|ref|XP_002891564.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297337406|gb|EFH67823.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 596
Score = 295 bits (755), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 156/439 (35%), Positives = 238/439 (54%), Gaps = 34/439 (7%)
Query: 225 NVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIA 284
N +++G++ GL E +F+ KDVVSW MIDG+++ + EA+T + M G+A
Sbjct: 142 NSLISGYSNCGLFEFGSRVFDGTEDKDVVSWTAMIDGFVRNDSSLEAMTYFVEMKRSGVA 201
Query: 285 PNDVMIVDLISACGRAMAFGEGLQIHSIIVKAG-FDCYDFIQATIIHFYAACGRINLARL 343
N++ +V ++ A +A G IH ++AG C FI ++++ Y CG
Sbjct: 202 ANEMTVVSVLKATRKAEDVRFGRSIHGFYLEAGRVRCDVFIGSSLVDMYGKCG------- 254
Query: 344 QFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMA 403
+DA+++F+ M R+V +W+A+I+GY Q
Sbjct: 255 ------------------------CYDDAQKVFDEMPSRNVVTWTALIAGYVQGRCFEKG 290
Query: 404 LELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDM 463
+ +F M+ + V PNE T+ SV A A G L GR H YV+ NSI +N + +ID
Sbjct: 291 MFVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYVIKNSIEINTTVGTTLIDF 350
Query: 464 YAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSI 523
YAKCG + A VF +R++ +V W A+I G A HG A + ++ + ++ N +
Sbjct: 351 YAKCGCLEEAILVFERLREK--NVYTWTAMINGFAAHGYAIGAVDLFHTMLSSHVSPNEV 408
Query: 524 TFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRS 583
TFI VLS C H GLV+ G R F SMK +N+EP HY CMVDL GR G LE+A+ +I
Sbjct: 409 TFIVVLSACAHGGLVEEGRRLFLSMKERFNLEPKADHYACMVDLFGRKGLLEEAKALIER 468
Query: 584 MPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDA 643
MPM+ +WG L + IH + E+G+ AA + LQPSH LL+N+Y+++ W+D
Sbjct: 469 MPMEPTNAVWGALFGSCLIHKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDDV 528
Query: 644 FSIRKEMRDCGMKRLPGFS 662
+RK+M+D + + PG S
Sbjct: 529 ARVRKQMKDQQVVKSPGCS 547
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 125/469 (26%), Positives = 204/469 (43%), Gaps = 106/469 (22%)
Query: 44 QIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRND 103
Q H+ I K G +S+ F++NSLI+ Y+ CGL F S
Sbjct: 124 QFHAHILKFGFDSDLFVRNSLISGYSNCGLFE-----FGS-------------------- 158
Query: 104 RLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVIS 163
VFD T K VS+T+MI GF +ND EA+ F +M+ GV NE+T+ SV+
Sbjct: 159 ------RVFDGTEDKDVVSWTAMIDGFVRNDSSLEAMTYFVEMKRSGVAANEMTVVSVLK 212
Query: 164 SSVHLGGIWECRMLHGLVIKL-MIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIV 222
++ + R +HG ++ + V I ++L++MY C +A+ +FDEM RN+V
Sbjct: 213 ATRKAEDVRFGRSIHGFYLEAGRVRCDVFIGSSLVDMYGKCGCYDDAQKVFDEMPSRNVV 272
Query: 223 SWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDG 282
+W ++ G Y+Q + + ++ ML
Sbjct: 273 TWTALIAG-------------------------------YVQGRCFEKGMFVFEEMLKSD 301
Query: 283 IAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLAR 342
+APN+ + ++SAC A G ++H ++K + + T+I FYA CG + A
Sbjct: 302 VAPNEKTLSSVLSACAHVGALHRGRRVHCYVIKNSIEINTTVGTTLIDFYAKCGCLEEAI 361
Query: 343 LQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNM 402
L FE + ++ +W A+I GF + GYA
Sbjct: 362 LVFERLREKNVYTWTAMINGFAAH--------------------------GYAIG----- 390
Query: 403 ALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLS----- 457
A++LFH M+ + V PNE+T + V A A G ++EGR L S+ NL
Sbjct: 391 AVDLFHTMLSSHVSPNEVTFIVVLSACAHGGLVEEGR-----RLFLSMKERFNLEPKADH 445
Query: 458 -AAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANL 505
A ++D++ + G + A + + T+ + W A+ +H D L
Sbjct: 446 YACMVDLFGRKGLLEEAKALIERMPMEPTN-AVWGALFGSCLIHKDYEL 493
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 95/371 (25%), Positives = 157/371 (42%), Gaps = 94/371 (25%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSG-LESNTFIQNSLINLYAKCGLISQAKSMF 81
E+ +VS L+ V G+ IH ++G + + FI +SL+++Y KCG
Sbjct: 204 EMTVVSVLKATRKAEDVRFGRSIHGFYLEAGRVRCDVFIGSSLVDMYGKCGC-------- 255
Query: 82 DSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALE 141
+DA++VFD+ P + V++T++I G+ Q C+ + +
Sbjct: 256 -----------------------YDDAQKVFDEMPSRNVVTWTALIAGYVQGRCFEKGMF 292
Query: 142 VFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYC 201
VF +M V PNE TL+SV+S+ H+G + R +H VIK I+ + T L++ Y
Sbjct: 293 VFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYVIKNSIEINTTVGTTLIDFYA 352
Query: 202 VCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDG 261
C L EA +F+ ++E+N+ +W M+NGFA G A +LF
Sbjct: 353 KCGCLEEAILVFERLREKNVYTWTAMINGFAAHGYAIGAVDLFH---------------- 396
Query: 262 YLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCY 321
ML ++PN+V + ++SAC EG ++
Sbjct: 397 ---------------TMLSSHVSPNEVTFIVVLSACAHGGLVEEGRRL------------ 429
Query: 322 DFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQK 381
F + R NL DH A ++ F R G++E+A+ L M
Sbjct: 430 ---------FLSMKERFNLE------PKADHYA---CMVDLFGRKGLLEEAKALIERMPM 471
Query: 382 RDVYS-WSAMI 391
+ W A+
Sbjct: 472 EPTNAVWGALF 482
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 90/369 (24%), Positives = 160/369 (43%), Gaps = 41/369 (11%)
Query: 240 ARELFERIPSKDVVSWGTMIDGYLQVERLSEALTM--YRAMLCDGIAPNDVMIVDLISAC 297
AR L +I + + W +++ + L+ L+ YR M +G+ P+ L+ A
Sbjct: 55 ARRLLCQIQTPSIQLWDSLVGHFSGRVTLNRRLSFLSYRQMRRNGVVPSRHTFPPLLKAV 114
Query: 298 GRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWN 357
+ + Q H+ I+K GFD F++ ++I Y+ CG F+ + SW
Sbjct: 115 FK-LRDANPFQFHAHILKFGFDSDLFVRNSLISGYSNCGLFEFGSRVFDGTEDKDVVSWT 173
Query: 358 ALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKP 417
A+I GF+RN +A F M++ +GV
Sbjct: 174 AMIDGFVRNDSSLEAMTYFVEMKR-------------------------------SGVAA 202
Query: 418 NEITMVSVFCAIASSGTLKEGRWAHEYVLN-NSITLNDNLSAAIIDMYAKCGSINTAFEV 476
NE+T+VSV A + ++ GR H + L + + + ++++DMY KCG + A +V
Sbjct: 203 NEMTVVSVLKATRKAEDVRFGRSIHGFYLEAGRVRCDVFIGSSLVDMYGKCGCYDDAQKV 262
Query: 477 FYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAG 536
F + R +V W A+I G + ++ ++ K ++ N T VLS C H G
Sbjct: 263 FDEMPSR--NVVTWTALIAGYVQGRCFEKGMFVFEEMLKSDVAPNEKTLSSVLSACAHVG 320
Query: 537 LVDLGER-YFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGT 595
+ G R + +K+ ++E + ++D + G LE+A V + K +V W
Sbjct: 321 ALHRGRRVHCYVIKN--SIEINTTVGTTLIDFYAKCGCLEEAILVFERLREK-NVYTWTA 377
Query: 596 LLAASRIHG 604
++ HG
Sbjct: 378 MINGFAAHG 386
>gi|147863814|emb|CAN79347.1| hypothetical protein VITISV_019894 [Vitis vinifera]
Length = 667
Score = 295 bits (755), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 185/635 (29%), Positives = 309/635 (48%), Gaps = 74/635 (11%)
Query: 35 AHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNI 94
+H + + +H+ + K+GL ++ + N L+ Y +S A + V+ N
Sbjct: 27 SHGHMYKAPVLHASLVKNGLIAHVYQCNILLQAYINSQALSDAHKLLHFMPQPSVVSYNT 86
Query: 95 MISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPN 154
++SGY + +++A ++FD T + C S+ ++ G +N E L F MR V P+
Sbjct: 87 ILSGYFKFGLVSEAIKLFDGTSKRDCHSWNIVLSGCVKNHKLGEGLTHFMKMRCSSVRPD 146
Query: 155 EVTLASVIS-SSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLF 213
T A +I + G + +H ++K+ D I TNLL MY + +AR +F
Sbjct: 147 NFTYAIIIPCCDLGFG-----QQVHADIVKVCSDLDAFIGTNLLRMYAEVGEIGDARKVF 201
Query: 214 DEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALT 273
D M R +V+WN M++ ++K G R +++
Sbjct: 202 DGMPSRGLVTWNAMISCYSKYG-------------------------------RGDKSIG 230
Query: 274 MYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYA 333
++R + +GI+ ++ +++ E +Q+HS+I++ GF F +++ Y+
Sbjct: 231 LFRQLXREGISADEYTYAIVLNEFAARWQVFEAMQVHSLIIERGFCSDRFTNNALVNLYS 290
Query: 334 ACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISG 393
CG + A FE + SW +I GF+++G +E+A LF MQ D
Sbjct: 291 KCGYVASASRLFEEIPDQDVVSWTVIIVGFLQSGHMEEAMWLFYQMQLGD---------- 340
Query: 394 YAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLN 453
++PN T + A A + ++GR H VL +
Sbjct: 341 ---------------------IEPNSFTFGGLLGACADANAFQKGRHFHGLVLKFGLLGA 379
Query: 454 D-NLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSD 512
D + +A++DMY+KCG + A F + +R ++ WN IICG A +G LK+Y++
Sbjct: 380 DVVVGSAVVDMYSKCGEMGDALRAFQEMPER--DIASWNGIICGYAQNGAGMKALKLYNE 437
Query: 513 ---LEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLG 569
L I N +TF+GVL C H GL+ G YFK M + ++P +HY CMVDLLG
Sbjct: 438 MVLLGPSGIAPNEVTFVGVLCACSHNGLLKEGYSYFKEMVDKHLIKPTAEHYTCMVDLLG 497
Query: 570 RAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVL 629
RAG L++AE +I ++P+K D V+WG LL A ++HG+V++ R A+ L +P + + VL
Sbjct: 498 RAGLLQEAEALILALPIKPDNVMWGALLGACKLHGDVQMTRRTAEHLYTNEPRNSSNYVL 557
Query: 630 LSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
L+N Y D G W +A IR+ M G+++ G S V
Sbjct: 558 LANSYTDIGEWGEAVEIREVMEARGVEKTAGCSWV 592
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 98/415 (23%), Positives = 173/415 (41%), Gaps = 79/415 (19%)
Query: 14 KANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGL 73
+ + +Y A+V L +A V + Q+HSLI + G S+ F N+L+NLY+KCG
Sbjct: 237 REGISADEYTYAIV--LNEFAARWQVFEAMQVHSLIIERGFCSDRFTNNALVNLYSKCGY 294
Query: 74 ISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQN 133
++ A +F+ D V+ ++I G++++ +
Sbjct: 295 VASASRLFEEIPDQDVVSWTVIIVGFLQSGHM---------------------------- 326
Query: 134 DCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKL-MIDGFVII 192
EA+ +F M++ + PN T ++ + + R HGLV+K ++ V++
Sbjct: 327 ---EEAMWLFYQMQLGDIEPNSFTFGGLLGACADANAFQKGRHFHGLVLKFGLLGADVVV 383
Query: 193 STNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDV 252
+ +++MY C + +A F EM ER+I SWN ++ G+A+ G A +L+ ++
Sbjct: 384 GSAVVDMYSKCGEMGDALRAFQEMPERDIASWNGIICGYAQNGAGMKALKLY-----NEM 438
Query: 253 VSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSI 312
V G GIAPN+V V ++ AC EG
Sbjct: 439 VLLGP-----------------------SGIAPNEVTFVGVLCACSHNGLLKEGYSYFKE 475
Query: 313 IVKAGFDCYDFIQATIIHFYAAC---GRINLAR----LQFELGIKDHIASWNALIAGFIR 365
+V I+ T H+ GR L + L L IK W AL+
Sbjct: 476 MVDK-----HLIKPTAEHYTCMVDLLGRAGLLQEAEALILALPIKPDNVMWGALLGACKL 530
Query: 366 NGMIE----DARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVK 416
+G ++ A L+ N + R+ ++ + + Y + A+E+ M GV+
Sbjct: 531 HGDVQMTRRTAEHLYTN-EPRNSSNYVLLANSYTDIGEWGEAVEIREVMEARGVE 584
>gi|356565531|ref|XP_003550993.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Glycine max]
Length = 628
Score = 295 bits (755), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 159/441 (36%), Positives = 248/441 (56%), Gaps = 13/441 (2%)
Query: 231 FAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMI 290
+A G + + LF R P+ +V W +I+ + + AL+ Y ML I PN +
Sbjct: 65 YASLGHLHHSVTLFHRTPNPNVFLWTHIINAHAHFDLFHHALSYYSQMLTHPIQPNAFTL 124
Query: 291 VDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIK 350
L+ AC +HS +K G + ++ ++ YA G + A+ F+ +
Sbjct: 125 SSLLKAC----TLHPARAVHSHAIKFGLSSHLYVSTGLVDAYARGGDVASAQKLFDAMPE 180
Query: 351 DHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGM 410
+ S+ A++ + ++GM+ +AR LF M +DV W+ MI GYAQ+ PN AL F M
Sbjct: 181 RSLVSYTAMLTCYAKHGMLPEARVLFEGMGMKDVVCWNVMIDGYAQHGCPNEALVFFRKM 240
Query: 411 VDA-------GVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDM 463
+ V+PNEIT+V+V + G L+ G+W H YV NN I +N + A++DM
Sbjct: 241 MMMMGGNGNGKVRPNEITVVAVLSSCGQVGALECGKWVHSYVENNGIKVNVRVGTALVDM 300
Query: 464 YAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSI 523
Y KCGS+ A +VF + + V WN++I G +HG ++ L+++ ++ +K + I
Sbjct: 301 YCKCGSLEDARKVFDVMEGK--DVVAWNSMIMGYGIHGFSDEALQLFHEMCCIGVKPSDI 358
Query: 524 TFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRS 583
TF+ VL+ C HAGLV G F SMK Y +EP ++HYGCMV+LLGRAG++++A +++RS
Sbjct: 359 TFVAVLTACAHAGLVSKGWEVFDSMKDGYGMEPKVEHYGCMVNLLGRAGRMQEAYDLVRS 418
Query: 584 MPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDA 643
M ++ D V+WGTLL A RIH NV +GE A+ L + + VLLSN+YA A W
Sbjct: 419 MEVEPDPVLWGTLLWACRIHSNVSLGEEIAEILVSNGLASSGTYVLLSNMYAAARNWVGV 478
Query: 644 FSIRKEMRDCGMKRLPGFSGV 664
+R M+ G+++ PG S +
Sbjct: 479 AKVRSMMKGSGVEKEPGCSSI 499
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 117/479 (24%), Positives = 204/479 (42%), Gaps = 85/479 (17%)
Query: 44 QIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRND 103
QIH+ + + GL + + L YA G
Sbjct: 41 QIHAALLRRGLHHHPILNFKLQRSYASLG------------------------------- 69
Query: 104 RLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVIS 163
L+ + +F +TP +T +I A D + AL + M + PN TL+S++
Sbjct: 70 HLHHSVTLFHRTPNPNVFLWTHIINAHAHFDLFHHALSYYSQMLTHPIQPNAFTLSSLLK 129
Query: 164 SSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVS 223
+ + R +H IK + + +ST L++ Y + A+ LFD M ER++VS
Sbjct: 130 ACT----LHPARAVHSHAIKFGLSSHLYVSTGLVDAYARGGDVASAQKLFDAMPERSLVS 185
Query: 224 WNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYR------- 276
+ ML +AK G++ AR LFE + KDVV W MIDGY Q +EAL +R
Sbjct: 186 YTAMLTCYAKHGMLPEARVLFEGMGMKDVVCWNVMIDGYAQHGCPNEALVFFRKMMMMMG 245
Query: 277 AMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACG 336
+ PN++ +V ++S+CG+ A G +HS + G + ++ Y CG
Sbjct: 246 GNGNGKVRPNEITVVAVLSSCGQVGALECGKWVHSYVENNGIKVNVRVGTALVDMYCKCG 305
Query: 337 RINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQ 396
+ AR F++ + +WN++I G+ +G ++A
Sbjct: 306 SLEDARKVFDVMEGKDVVAWNSMIMGYGIHGFSDEA------------------------ 341
Query: 397 NEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNL 456
L+LFH M GVKP++IT V+V A A +G + +G W + + + +
Sbjct: 342 -------LQLFHEMCCIGVKPSDITFVAVLTACAHAGLVSKG-WEVFDSMKDGYGMEPKV 393
Query: 457 S--AAIIDMYAKCGSINTAFEVFYHIRDRTTSVSP----WNAIICGLAMHGDANLTLKI 509
++++ + G + A+++ R+ V P W ++ +H + +L +I
Sbjct: 394 EHYGCMVNLLGRAGRMQEAYDLV-----RSMEVEPDPVLWGTLLWACRIHSNVSLGEEI 447
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 149/316 (47%), Gaps = 44/316 (13%)
Query: 3 LDHFHSV--FNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFI 60
D FH + SQ L S L+ C+ H A + +HS K GL S+ ++
Sbjct: 99 FDLFHHALSYYSQMLTHPIQPNAFTLSSLLKACTLHPA----RAVHSHAIKFGLSSHLYV 154
Query: 61 QNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCC 120
L++ YA+ G ++ A+ +FD+ V+ M++ Y ++ L +AR +F+ +K
Sbjct: 155 STGLVDAYARGGDVASAQKLFDAMPERSLVSYTAMLTCYAKHGMLPEARVLFEGMGMKDV 214
Query: 121 VSYTSMIMGFAQNDCWREALEVFRD-------MRILGVIPNEVTLASVISSSVHLGGIWE 173
V + MI G+AQ+ C EAL FR V PNE+T+ +V+SS +G +
Sbjct: 215 VCWNVMIDGYAQHGCPNEALVFFRKMMMMMGGNGNGKVRPNEITVVAVLSSCGQVGALEC 274
Query: 174 CRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAK 233
+ +H V I V + T L++MYC C SL +AR +FD M+ +++V+WN M+ G+
Sbjct: 275 GKWVHSYVENNGIKVNVRVGTALVDMYCKCGSLEDARKVFDVMEGKDVVAWNSMIMGYGI 334
Query: 234 AGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDL 293
G + EAL ++ M C G+ P+D+ V +
Sbjct: 335 HGFSD-------------------------------EALQLFHEMCCIGVKPSDITFVAV 363
Query: 294 ISACGRAMAFGEGLQI 309
++AC A +G ++
Sbjct: 364 LTACAHAGLVSKGWEV 379
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 71/334 (21%), Positives = 135/334 (40%), Gaps = 73/334 (21%)
Query: 307 LQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRN 366
LQIH+ +++ G + + + YA+ G ++
Sbjct: 40 LQIHAALLRRGLHHHPILNFKLQRSYASLGHLH--------------------------- 72
Query: 367 GMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVF 426
+ LF+ +V+ W+ +I+ +A + + AL + M+ ++PN T+ S+
Sbjct: 73 ----HSVTLFHRTPNPNVFLWTHIINAHAHFDLFHHALSYYSQMLTHPIQPNAFTLSSLL 128
Query: 427 CAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRT-- 484
A TL R H + + ++ + +S ++D YA+ G + +A ++F + +R+
Sbjct: 129 KAC----TLHPARAVHSHAIKFGLSSHLYVSTGLVDAYARGGDVASAQKLFDAMPERSLV 184
Query: 485 ---------------------------TSVSPWNAIICGLAMHGDANLTLKIYSD----- 512
V WN +I G A HG N L +
Sbjct: 185 SYTAMLTCYAKHGMLPEARVLFEGMGMKDVVCWNVMIDGYAQHGCPNEALVFFRKMMMMM 244
Query: 513 --LEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGR 570
++ N IT + VLS+C G ++ G ++ S ++ +++ +VD+ +
Sbjct: 245 GGNGNGKVRPNEITVVAVLSSCGQVGALECG-KWVHSYVENNGIKVNVRVGTALVDMYCK 303
Query: 571 AGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHG 604
G LEDA +V M K DVV W +++ IHG
Sbjct: 304 CGSLEDARKVFDVMEGK-DVVAWNSMIMGYGIHG 336
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 109/246 (44%), Gaps = 47/246 (19%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E+ +V+ L C A+ G+ +HS + +G++ N + +L+++Y KCG
Sbjct: 256 EITVVAVLSSCGQVGALECGKWVHSYVENNGIKVNVRVGTALVDMYCKCG---------- 305
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
L DAR+VFD K V++ SMIMG+ + EAL++
Sbjct: 306 ---------------------SLEDARKVFDVMEGKDVVAWNSMIMGYGIHGFSDEALQL 344
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGI---WECRMLHGLVIKLMIDGF-----VIIST 194
F +M +GV P+++T +V+++ H G + WE V M DG+ V
Sbjct: 345 FHEMCCIGVKPSDITFVAVLTACAHAGLVSKGWE-------VFDSMKDGYGMEPKVEHYG 397
Query: 195 NLLNMYCVCSSLVEARSLFDEMK-ERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVV 253
++N+ + EA L M+ E + V W +L V L E+ E + S +
Sbjct: 398 CMVNLLGRAGRMQEAYDLVRSMEVEPDPVLWGTLLWACRIHSNVSLGEEIAEILVSNGLA 457
Query: 254 SWGTMI 259
S GT +
Sbjct: 458 SSGTYV 463
>gi|212275047|ref|NP_001130303.1| uncharacterized protein LOC100191397 [Zea mays]
gi|194688792|gb|ACF78480.1| unknown [Zea mays]
Length = 706
Score = 295 bits (755), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 194/684 (28%), Positives = 316/684 (46%), Gaps = 107/684 (15%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
L S L C A A+ G++ H L K GL+ + F++N L+ +Y KCG ++
Sbjct: 42 FTLASVLSACGAVAALDDGRRCHGLAVKVGLDGHQFVENGLLGMYTKCGSVA-------- 93
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
DA +FD P VS+T+M+ G AQ +AL +F
Sbjct: 94 -----------------------DAVRLFDGMPSPNEVSFTAMMGGLAQGGAVDDALRLF 130
Query: 144 RDMRILGVIPNEVTLASVISSSVHL--------GGIWECRMLHGLVIKLMIDGFVIISTN 195
M G+ + V ++SV+ + I + +H LV++ + +
Sbjct: 131 ARMSRTGIRVDPVAVSSVLGACAQACAGDYNVARAIQLAQSIHALVVRKGFGSDQHVGNS 190
Query: 196 LLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELA--------------- 240
L+++Y + EA +F+ + +IVSWN+++ G+ + G E A
Sbjct: 191 LVDLYAKGMKMDEAIKVFESLSSVSIVSWNILITGYGQLGCYERAMEVLEFMQESGFEPN 250
Query: 241 --------------------RELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLC 280
R +F++IP V +W T++ GY Q E E + ++R M
Sbjct: 251 EVTYSNMLASCIKARDVPSARAMFDKIPKPSVTTWNTLLSGYGQEELHQETIDLFRRMQH 310
Query: 281 DGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINL 340
+ P+ + ++S+C R F G Q+HS V+ F+ + +I Y+ CG++ +
Sbjct: 311 QNVQPDRTTLAVILSSCSRLGNFELGKQVHSASVRLLLHNDMFVASGLIDIYSKCGQVGI 370
Query: 341 ARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQP 400
A + +FN M +RDV W++MISG A +
Sbjct: 371 ALI-------------------------------IFNMMTERDVVCWNSMISGLAIHSLS 399
Query: 401 NMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAI 460
A + M + G+ P E + S+ A ++ +GR H VL + N + ++
Sbjct: 400 EEAFDFLKQMRENGMFPTESSYASMINLCARLSSIPQGRQMHAQVLKDGYDQNVYVGCSL 459
Query: 461 IDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKL 520
IDMYAK G+++ A +F++ V+ WN +I G A +G ++++ + K
Sbjct: 460 IDMYAKSGNMDDA-RLFFNCMIVKNLVA-WNEMIHGYAQNGFGEKAVELFEYMLTTKQKP 517
Query: 521 NSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEV 580
+S+TFI VL+ C H+GLVD +F SM+S Y + P ++HY C++D L RA + + E V
Sbjct: 518 DSVTFIAVLTGCSHSGLVDEAVTFFNSMESNYGITPLVEHYTCLIDALARAARFAEVEAV 577
Query: 581 IRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRW 640
I MP K D ++W LLAA +H N E+GE +AK L L P + VLLSNIYA GR
Sbjct: 578 IGKMPYKDDPILWEVLLAACVVHHNAELGEFSAKHLFRLDPKNPSPYVLLSNIYATLGRH 637
Query: 641 EDAFSIRKEMRDCGMKRLPGFSGV 664
DA ++R M G+ + G+S V
Sbjct: 638 GDASAVRALMSSRGVVKGRGYSWV 661
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 132/546 (24%), Positives = 240/546 (43%), Gaps = 89/546 (16%)
Query: 116 PIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECR 175
P + VS+ ++I A++ EALE+++ M G+ P TLASV+S+ + + + R
Sbjct: 2 PDRNAVSWNTVIAAVARSGSPGEALEMYQGMLQEGLAPTNFTLASVLSACGAVAALDDGR 61
Query: 176 MLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAG 235
HGL +K+ +DG + LL MY C S+ +A LFD M N VS+ M+ G A+ G
Sbjct: 62 RCHGLAVKVGLDGHQFVENGLLGMYTKCGSVADAVRLFDGMPSPNEVSFTAMMGGLAQGG 121
Query: 236 LVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLIS 295
V+ A LF R+ GI + V + ++
Sbjct: 122 AVDDALRLFARMSRT-------------------------------GIRVDPVAVSSVLG 150
Query: 296 ACGRAMA----FGEGLQ----IHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFEL 347
AC +A A +Q IH+++V+ GF + +++ YA +++ A FE
Sbjct: 151 ACAQACAGDYNVARAIQLAQSIHALVVRKGFGSDQHVGNSLVDLYAKGMKMDEAIKVFES 210
Query: 348 GIKDHIASWNALIAGFIRNGMIE-----------------------------------DA 372
I SWN LI G+ + G E A
Sbjct: 211 LSSVSIVSWNILITGYGQLGCYERAMEVLEFMQESGFEPNEVTYSNMLASCIKARDVPSA 270
Query: 373 RQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASS 432
R +F+ + K V +W+ ++SGY Q E ++LF M V+P+ T+ + + +
Sbjct: 271 RAMFDKIPKPSVTTWNTLLSGYGQEELHQETIDLFRRMQHQNVQPDRTTLAVILSSCSRL 330
Query: 433 GTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNA 492
G + G+ H + + + +++ +ID+Y+KCG + A +F + +R V WN+
Sbjct: 331 GNFELGKQVHSASVRLLLHNDMFVASGLIDIYSKCGQVGIALIIFNMMTER--DVVCWNS 388
Query: 493 IICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGER-YFKSMKSV 551
+I GLA+H + + + + ++ +++ C + G + + + +K
Sbjct: 389 MISGLAIHSLSEEAFDFLKQMRENGMFPTESSYASMINLCARLSSIPQGRQMHAQVLKDG 448
Query: 552 YNVEPDLKHYGC-MVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVE--V 608
Y+ + GC ++D+ ++G ++DA M +K ++V W + IHG +
Sbjct: 449 YDQN---VYVGCSLIDMYAKSGNMDDARLFFNCMIVK-NLVAWNEM-----IHGYAQNGF 499
Query: 609 GERAAK 614
GE+A +
Sbjct: 500 GEKAVE 505
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 87/376 (23%), Positives = 167/376 (44%), Gaps = 49/376 (13%)
Query: 247 IPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEG 306
+P ++ VSW T+I + EAL MY+ ML +G+AP + + ++SACG A +G
Sbjct: 1 MPDRNAVSWNTVIAAVARSGSPGEALEMYQGMLQEGLAPTNFTLASVLSACGAVAALDDG 60
Query: 307 LQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRN 366
+ H + VK G D + F++ ++ Y CG
Sbjct: 61 RRCHGLAVKVGLDGHQFVENGLLGMYTKCGS----------------------------- 91
Query: 367 GMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVF 426
+ DA +LF+ M + S++AM+ G AQ + AL LF M G++ + + + SV
Sbjct: 92 --VADAVRLFDGMPSPNEVSFTAMMGGLAQGGAVDDALRLFARMSRTGIRVDPVAVSSVL 149
Query: 427 --CAIASSGTLKEGRW------AHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFY 478
CA A +G R H V+ + ++ +++D+YAK ++ A +VF
Sbjct: 150 GACAQACAGDYNVARAIQLAQSIHALVVRKGFGSDQHVGNSLVDLYAKGMKMDEAIKVFE 209
Query: 479 HIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLV 538
+ + S+ WN +I G G +++ +++ + N +T+ +L++C A V
Sbjct: 210 SL--SSVSIVSWNILITGYGQLGCYERAMEVLEFMQESGFEPNEVTYSNMLASCIKARDV 267
Query: 539 DLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMP---MKADVVIWGT 595
F + +P + + ++ G+ ++ ++ R M ++ D
Sbjct: 268 PSARAMFDKIP-----KPSVTTWNTLLSGYGQEELHQETIDLFRRMQHQNVQPDRTTLAV 322
Query: 596 LLAASRIHGNVEVGER 611
+L++ GN E+G++
Sbjct: 323 ILSSCSRLGNFELGKQ 338
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 131/277 (47%), Gaps = 14/277 (5%)
Query: 379 MQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG 438
M R+ SW+ +I+ A++ P ALE++ GM+ G+ P T+ SV A + L +G
Sbjct: 1 MPDRNAVSWNTVIAAVARSGSPGEALEMYQGMLQEGLAPTNFTLASVLSACGAVAALDDG 60
Query: 439 RWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLA 498
R H + + + + ++ MY KCGS+ A +F + + + + A++ GLA
Sbjct: 61 RRCHGLAVKVGLDGHQFVENGLLGMYTKCGSVADAVRLFDGM--PSPNEVSFTAMMGGLA 118
Query: 499 MHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLG-ERYFKSMKSVYNVE-- 555
G + L++++ + + I+++ + VL C A D R + +S++ +
Sbjct: 119 QGGAVDDALRLFARMSRTGIRVDPVAVSSVLGACAQACAGDYNVARAIQLAQSIHALVVR 178
Query: 556 ---PDLKHYG-CMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGER 611
+H G +VDL + ++++A +V S+ +V W L+ +G + ER
Sbjct: 179 KGFGSDQHVGNSLVDLYAKGMKMDEAIKVFESLS-SVSIVSWNILITG---YGQLGCYER 234
Query: 612 AAKSLAGLQPS-HGPSRVLLSNIYADAGRWEDAFSIR 647
A + L +Q S P+ V SN+ A + D S R
Sbjct: 235 AMEVLEFMQESGFEPNEVTYSNMLASCIKARDVPSAR 271
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 70/136 (51%), Gaps = 5/136 (3%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E + S + C+ ++ QG+Q+H+ + K G + N ++ SLI++YAK G + A+ F+
Sbjct: 418 ESSYASMINLCARLSSIPQGRQMHAQVLKDGYDQNVYVGCSLIDMYAKSGNMDDARLFFN 477
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFD---KTPIKC-CVSYTSMIMGFAQNDCWRE 138
+ VA N MI GY +N A E+F+ T K V++ +++ G + + E
Sbjct: 478 CMIVKNLVAWNEMIHGYAQNGFGEKAVELFEYMLTTKQKPDSVTFIAVLTGCSHSGLVDE 537
Query: 139 ALEVFRDMRI-LGVIP 153
A+ F M G+ P
Sbjct: 538 AVTFFNSMESNYGITP 553
>gi|222631730|gb|EEE63862.1| hypothetical protein OsJ_18686 [Oryza sativa Japonica Group]
Length = 551
Score = 295 bits (755), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 160/434 (36%), Positives = 252/434 (58%), Gaps = 10/434 (2%)
Query: 237 VELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAML-C-----DGIAPNDVMI 290
V A +F ++ ++ MI Y Q + +A+ +Y ML C DG A D
Sbjct: 62 VTHAARVFAQVRDPNLHLHNAMIKAYAQNHQHRDAVAVYIRMLRCPTSPPDGHAGGDRFT 121
Query: 291 VD-LISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGI 349
L+ ACG A G Q+H+ +V++G D +Q ++I Y G + LA F+
Sbjct: 122 YPFLLKACGGTAALELGKQVHTHVVRSGCDSSAIVQNSLIEMYTRAGDLALAHKVFDEMR 181
Query: 350 KDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHG 409
+ + SWN LI+ R G + A LFN+M + + +W+AM+SGY A++ F
Sbjct: 182 ERDVVSWNMLISAHARLGQMRKATALFNSMPDKTIVTWTAMVSGYTTVGDYPGAVDAFRS 241
Query: 410 MVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGS 469
M G +P+++++V+V A A GTL+ GRW + Y + + + ++ A+++MYAKCG
Sbjct: 242 MQTEGFEPDDVSIVAVLPACAQLGTLELGRWIYAYCKRHGMLTSTHICNALMEMYAKCGC 301
Query: 470 INTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKR-NIKLNSITFIGV 528
I+ A ++F + D+ V W+ +I GLA HG A+ + +++++EK ++ N ITF+G+
Sbjct: 302 IDQALQLFDGMADK--DVISWSTVIGGLAAHGRAHEAVWLFTEMEKEGKVRPNVITFVGL 359
Query: 529 LSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKA 588
LS C +AGLVD G +F M VY VEP ++HYGC+VDLLGR+GQ+ A +++R MP+ A
Sbjct: 360 LSACSYAGLVDEGLSHFDRMNDVYGVEPGVEHYGCVVDLLGRSGQIRRALDLVRDMPVPA 419
Query: 589 DVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRK 648
D +WG+LL+A R HG+V+ AA+ L L+P + V+L+N+YA A RW D S RK
Sbjct: 420 DAKVWGSLLSACRSHGDVDTAVLAAERLVELEPDDVGNLVMLANVYAAARRWSDVASTRK 479
Query: 649 EMRDCGMKRLPGFS 662
+R M++ PG S
Sbjct: 480 AIRSRSMRKTPGCS 493
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 105/413 (25%), Positives = 183/413 (44%), Gaps = 47/413 (11%)
Query: 104 RLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF-RDMRILGVIPN------EV 156
R+ A VF + + +MI +AQN R+A+ V+ R +R P+
Sbjct: 61 RVTHAARVFAQVRDPNLHLHNAMIKAYAQNHQHRDAVAVYIRMLRCPTSPPDGHAGGDRF 120
Query: 157 TLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEM 216
T ++ + + + +H V++ D I+ +L+ MY L A +FDEM
Sbjct: 121 TYPFLLKACGGTAALELGKQVHTHVVRSGCDSSAIVQNSLIEMYTRAGDLALAHKVFDEM 180
Query: 217 KERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYR 276
+ER++VSWN++++ A+ G + A LF +P K +V+W M+ GY V A+ +R
Sbjct: 181 RERDVVSWNMLISAHARLGQMRKATALFNSMPDKTIVTWTAMVSGYTTVGDYPGAVDAFR 240
Query: 277 AMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACG 336
+M +G P+DV IV ++ AC + G I++ + G I ++ YA CG
Sbjct: 241 SMQTEGFEPDDVSIVAVLPACAQLGTLELGRWIYAYCKRHGMLTSTHICNALMEMYAKCG 300
Query: 337 RINLARLQFELGIKDH-IASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYA 395
I+ A LQ G+ D + SW+ +I G +G +A LF M+K
Sbjct: 301 CIDQA-LQLFDGMADKDVISWSTVIGGLAAHGRAHEAVWLFTEMEK-------------- 345
Query: 396 QNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDN 455
+ V+PN IT V + A + +G + EG +H +N+ +
Sbjct: 346 ----------------EGKVRPNVITFVGLLSACSYAGLVDEG-LSHFDRMNDVYGVEPG 388
Query: 456 LS--AAIIDMYAKCGSINTAFEVFYHIRDRTTSVSP--WNAIICGLAMHGDAN 504
+ ++D+ + G I A ++ +RD W +++ HGD +
Sbjct: 389 VEHYGCVVDLLGRSGQIRRALDL---VRDMPVPADAKVWGSLLSACRSHGDVD 438
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 137/279 (49%), Gaps = 32/279 (11%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
L+ C A+ G+Q+H+ + +SG +S+ +QNSLI +Y + G ++ A +FD D
Sbjct: 126 LKACGGTAALELGKQVHTHVVRSGCDSSAIVQNSLIEMYTRAGDLALAHKVFDEMRERDV 185
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
V+ N++IS + R ++ A +F+ P K V++T+M+ G+ + A++ FR M+
Sbjct: 186 VSWNMLISAHARLGQMRKATALFNSMPDKTIVTWTAMVSGYTTVGDYPGAVDAFRSMQTE 245
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
G P++V++ +V+ + LG + R ++ + + I L+ MY C + +A
Sbjct: 246 GFEPDDVSIVAVLPACAQLGTLELGRWIYAYCKRHGMLTSTHICNALMEMYAKCGCIDQA 305
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLS 269
LFD M +++++SW+ ++ G A G R
Sbjct: 306 LQLFDGMADKDVISWSTVIGGLAAHG-------------------------------RAH 334
Query: 270 EALTMYRAMLCDG-IAPNDVMIVDLISACGRAMAFGEGL 307
EA+ ++ M +G + PN + V L+SAC A EGL
Sbjct: 335 EAVWLFTEMEKEGKVRPNVITFVGLLSACSYAGLVDEGL 373
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 56/333 (16%), Positives = 123/333 (36%), Gaps = 55/333 (16%)
Query: 301 MAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALI 360
+ F + L++H +V+ ++ I+H A R+ A F ++ NA+I
Sbjct: 25 VTFRDLLRVHGHVVRLRISQSSYLATQIVHLCNAHRRVTHAARVFAQVRDPNLHLHNAMI 84
Query: 361 AGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEI 420
+ +N DA ++ M + P D +
Sbjct: 85 KAYAQNHQHRDAVAVYIRMLR-------------CPTSPP-----------DGHAGGDRF 120
Query: 421 TMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHI 480
T + A + L+ G+ H +V+ + + + ++I+MY + G + A +VF +
Sbjct: 121 TYPFLLKACGGTAALELGKQVHTHVVRSGCDSSAIVQNSLIEMYTRAGDLALAHKVFDEM 180
Query: 481 RDRTT-----------------------------SVSPWNAIICGLAMHGDANLTLKIYS 511
R+R ++ W A++ G GD + +
Sbjct: 181 RERDVVSWNMLISAHARLGQMRKATALFNSMPDKTIVTWTAMVSGYTTVGDYPGAVDAFR 240
Query: 512 DLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRA 571
++ + + ++ + VL C G ++LG R+ + + + ++++ +
Sbjct: 241 SMQTEGFEPDDVSIVAVLPACAQLGTLELG-RWIYAYCKRHGMLTSTHICNALMEMYAKC 299
Query: 572 GQLEDAEEVIRSMPMKADVVIWGTLLAASRIHG 604
G ++ A ++ M K DV+ W T++ HG
Sbjct: 300 GCIDQALQLFDGMADK-DVISWSTVIGGLAAHG 331
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 57/100 (57%), Gaps = 3/100 (3%)
Query: 16 NLQNSDYE---LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCG 72
++Q +E +++V+ L C+ + G+ I++ + G+ ++T I N+L+ +YAKCG
Sbjct: 241 SMQTEGFEPDDVSIVAVLPACAQLGTLELGRWIYAYCKRHGMLTSTHICNALMEMYAKCG 300
Query: 73 LISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVF 112
I QA +FD + D ++ + +I G + R ++A +F
Sbjct: 301 CIDQALQLFDGMADKDVISWSTVIGGLAAHGRAHEAVWLF 340
>gi|224089505|ref|XP_002308737.1| predicted protein [Populus trichocarpa]
gi|222854713|gb|EEE92260.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 295 bits (755), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 172/507 (33%), Positives = 257/507 (50%), Gaps = 67/507 (13%)
Query: 160 SVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKER 219
+++ HL + E +++H L++ +++ LLN+Y C LV AR LFDEM R
Sbjct: 20 TLLKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEMSSR 79
Query: 220 NIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAML 279
++V+W +I GY Q +R +AL + ML
Sbjct: 80 DVVTWT-------------------------------ALITGYSQHDRPQDALLLLPEML 108
Query: 280 CDGIAPNDVMIVDLISACGRAMAFG--EGLQIHSIIVKAGFDCYDFIQATIIHFYAACGR 337
G+ PN + L+ A + +G Q+H + ++ G+D ++ I+ YA C
Sbjct: 109 RIGLKPNQFTLASLLKAASGVGSTDVLQGRQLHGLCLRYGYDSNVYVSCAILDMYARCHH 168
Query: 338 INLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQN 397
+ A+L F++ + + SWNALIAG+ R G + A LF+NM + +
Sbjct: 169 LEEAQLIFDVMVSKNEVSWNALIAGYARKGQGDKAFCLFSNMLREN-------------- 214
Query: 398 EQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLS 457
VKP T SV CA AS G+L++G+W H ++ L +
Sbjct: 215 -----------------VKPTHFTYSSVLCACASMGSLEQGKWVHALMIKWGEKLVAFVG 257
Query: 458 AAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRN 517
++DMYAK GSI A +VF + R V WN+++ G + HG + L+ + ++ +
Sbjct: 258 NTLLDMYAKSGSIEDAKKVFDRLAKR--DVVSWNSMLTGYSQHGLGKVALQRFEEMLRTR 315
Query: 518 IKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDA 577
I N ITF+ VL+ C HAGL+D G YF MK YNVEP + HY MVDLLGRAG L+ A
Sbjct: 316 IAPNDITFLCVLTACSHAGLLDEGRHYFDMMKK-YNVEPQISHYVTMVDLLGRAGHLDRA 374
Query: 578 EEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADA 637
+ I MP+K +WG LL A R+H N+E+G AA+ + L + + VLL NIYA A
Sbjct: 375 IQFISEMPIKPTAAVWGALLGACRMHKNMELGGYAAECIFELDSHYPGTHVLLYNIYALA 434
Query: 638 GRWEDAFSIRKEMRDCGMKRLPGFSGV 664
GRW DA +RK M++ G+K+ P S V
Sbjct: 435 GRWNDAAKVRKMMKESGVKKEPACSWV 461
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 113/478 (23%), Positives = 215/478 (44%), Gaps = 96/478 (20%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
L+ C+ +++G+ IH+L+ S + +QN+L+NLYAKCG
Sbjct: 22 LKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCG----------------- 64
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
L AR++FD+ + V++T++I G++Q+D ++AL + +M +
Sbjct: 65 --------------DLVYARKLFDEMSSRDVVTWTALITGYSQHDRPQDALLLLPEMLRI 110
Query: 150 GVIPNEVTLASVISSSVHLGG--IWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLV 207
G+ PN+ TLAS++ ++ +G + + R LHGL ++ D V +S +L+MY C L
Sbjct: 111 GLKPNQFTLASLLKAASGVGSTDVLQGRQLHGLCLRYGYDSNVYVSCAILDMYARCHHLE 170
Query: 208 EARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVER 267
EA+ +FD M SK+ VSW +I GY + +
Sbjct: 171 EAQLIFDVM-------------------------------VSKNEVSWNALIAGYARKGQ 199
Query: 268 LSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQAT 327
+A ++ ML + + P ++ AC + +G +H++++K G F+ T
Sbjct: 200 GDKAFCLFSNMLRENVKPTHFTYSSVLCACASMGSLEQGKWVHALMIKWGEKLVAFVGNT 259
Query: 328 IIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSW 387
++ YA G I A+ F+ K + SWN+++ G+ ++G+
Sbjct: 260 LLDMYAKSGSIEDAKKVFDRLAKRDVVSWNSMLTGYSQHGL------------------- 300
Query: 388 SAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLN 447
+AL+ F M+ + PN+IT + V A + +G L EGR + +
Sbjct: 301 ------------GKVALQRFEEMLRTRIAPNDITFLCVLTACSHAGLLDEGRHYFDMMKK 348
Query: 448 NSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANL 505
++ + ++D+ + G ++ A + + + T+ + W A++ MH + L
Sbjct: 349 YNVEPQISHYVTMVDLLGRAGHLDRAIQFISEMPIKPTA-AVWGALLGACRMHKNMEL 405
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 99/237 (41%), Gaps = 71/237 (29%)
Query: 28 SALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTL 87
S L C++ ++ QG+ +H+L+ K G + F+ N+L+++YAK G I AK +FD +
Sbjct: 224 SVLCACASMGSLEQGKWVHALMIKWGEKLVAFVGNTLLDMYAKSGSIEDAKKVFDRLAKR 283
Query: 88 DPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMR 147
D V+ N SM+ G++Q+ + AL+ F +M
Sbjct: 284 DVVSWN-------------------------------SMLTGYSQHGLGKVALQRFEEML 312
Query: 148 ILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLV 207
+ PN++T V+++ H G ++D
Sbjct: 313 RTRIAPNDITFLCVLTACSHAG---------------LLD-------------------- 337
Query: 208 EARSLFDEMKERN----IVSWNVMLNGFAKAGLVELARELFERIPSKDVVS-WGTMI 259
E R FD MK+ N I + M++ +AG ++ A + +P K + WG ++
Sbjct: 338 EGRHYFDMMKKYNVEPQISHYVTMVDLLGRAGHLDRAIQFISEMPIKPTAAVWGALL 394
>gi|334186622|ref|NP_680717.2| tetratricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
gi|357529479|sp|Q9M4P3.3|PP316_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g16835, mitochondrial; AltName: Full=Protein DYW10;
Flags: Precursor
gi|332658412|gb|AEE83812.1| tetratricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
Length = 656
Score = 295 bits (755), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 168/509 (33%), Positives = 272/509 (53%), Gaps = 47/509 (9%)
Query: 158 LASVISSSVHLGGI-WECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEM 216
L +I+ V G I R+ HG+ K + ++ L+ + S ++EA LFDE+
Sbjct: 64 LNKIIARCVRSGDIDGALRVFHGMRAK----NTITWNSLLIGISKDPSRMMEAHQLFDEI 119
Query: 217 KERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYR 276
E + S+N+ML+ + + E A+ F+R+P KD SW TMI GY + + +A ++
Sbjct: 120 PEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFY 179
Query: 277 AMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACG 336
+M+ N+V +IS Y CG
Sbjct: 180 SMM----EKNEVSWNAMISG-----------------------------------YIECG 200
Query: 337 RINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ-KRDVYSWSAMISGYA 395
+ A F++ + +W A+I G+++ +E A +F +M +++ +W+AMISGY
Sbjct: 201 DLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYV 260
Query: 396 QNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDN 455
+N +P L+LF M++ G++PN + S + L+ GR H+ V +++ +
Sbjct: 261 ENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVT 320
Query: 456 LSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEK 515
++I MY KCG + A+++F ++ + V WNA+I G A HG+A+ L ++ ++
Sbjct: 321 ALTSLISMYCKCGELGDAWKLFEVMKKK--DVVAWNAMISGYAQHGNADKALCLFREMID 378
Query: 516 RNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLE 575
I+ + ITF+ VL C HAGLV++G YF+SM Y VEP HY CMVDLLGRAG+LE
Sbjct: 379 NKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLE 438
Query: 576 DAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYA 635
+A ++IRSMP + ++GTLL A R+H NVE+ E AA+ L L + V L+NIYA
Sbjct: 439 EALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGYVQLANIYA 498
Query: 636 DAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
RWED +RK M++ + ++PG+S +
Sbjct: 499 SKNRWEDVARVRKRMKESNVVKVPGYSWI 527
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 120/453 (26%), Positives = 192/453 (42%), Gaps = 80/453 (17%)
Query: 49 IFKSGLESNTFIQNSL-INLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLND 107
+F NT NSL I + + +A +FD D + NIM+S Y+RN
Sbjct: 83 VFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLFDEIPEPDTFSYNIMLSCYVRNVNFEK 142
Query: 108 AREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVH 167
A+ FD+ P K S+ +MI G+A+ +A E+F M + NEV+ ++IS
Sbjct: 143 AQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSM----MEKNEVSWNAMISG--- 195
Query: 168 LGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVM 227
Y C L +A F R +V+W M
Sbjct: 196 --------------------------------YIECGDLEKASHFFKVAPVRGVVAWTAM 223
Query: 228 LNGFAKAGLVELARELFERIP-SKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPN 286
+ G+ KA VELA +F+ + +K++V+W MI GY++ R + L ++RAML +GI PN
Sbjct: 224 ITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPN 283
Query: 287 DVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQAT-IIHFYAACGRINLARLQF 345
+ + C A G QIH I+ K+ C D T +I Y CG + A F
Sbjct: 284 SSGLSSALLGCSELSALQLGRQIHQIVSKSTL-CNDVTALTSLISMYCKCGELGDAWKLF 342
Query: 346 ELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALE 405
E+ K + +WNA+I+G YAQ+ + AL
Sbjct: 343 EVMKKKDVVAWNAMISG-------------------------------YAQHGNADKALC 371
Query: 406 LFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNN-SITLNDNLSAAIIDMY 464
LF M+D ++P+ IT V+V A +G + G E ++ + + + ++D+
Sbjct: 372 LFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLL 431
Query: 465 AKCGSINTAFEVFYHIRDRTTSVSPWNAIICGL 497
+ G + A ++ R+ P A+ L
Sbjct: 432 GRAGKLEEALKLI-----RSMPFRPHAAVFGTL 459
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 109/236 (46%), Gaps = 19/236 (8%)
Query: 350 KDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHG 409
+D I N +IA +R+G I+ A ++F+ M+ ++ +W++++ G +++ P+ +E H
Sbjct: 58 QDQIFPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKD--PSRMMEA-HQ 114
Query: 410 MVDAGVKPNEITM-VSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCG 468
+ D +P+ + + + C + + K + ++ + N +I YA+ G
Sbjct: 115 LFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWN-----TMITGYARRG 169
Query: 469 SINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGV 528
+ A E+FY + ++ VS WNA+I G GD + R + + + +
Sbjct: 170 EMEKARELFYSMMEK-NEVS-WNAMISGYIECGDLEKASHFFKVAPVRGV----VAWTAM 223
Query: 529 LSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSM 584
++ A V+L E FK M V +L + M+ + ED ++ R+M
Sbjct: 224 ITGYMKAKKVELAEAMFKDM----TVNKNLVTWNAMISGYVENSRPEDGLKLFRAM 275
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 58/109 (53%), Gaps = 4/109 (3%)
Query: 25 ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSC 84
L SAL CS A+ G+QIH ++ KS L ++ SLI++Y KCG + A +F+
Sbjct: 286 GLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVM 345
Query: 85 STLDPVACNIMISGYIRNDRLNDA----REVFDKTPIKCCVSYTSMIMG 129
D VA N MISGY ++ + A RE+ D +++ ++++
Sbjct: 346 KKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLA 394
>gi|449475140|ref|XP_004154387.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449522468|ref|XP_004168248.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
Length = 574
Score = 295 bits (754), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 167/499 (33%), Positives = 263/499 (52%), Gaps = 65/499 (13%)
Query: 159 ASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKE 218
AS++ S V I + LH + ++ I +++T L+N+YC+C+SL A LFD
Sbjct: 5 ASLLQSCVVRKAIEPGKQLHARICQVGISFNPLLATKLVNLYCICNSLTNAHLLFD---- 60
Query: 219 RNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAM 278
RI +++ W MI GY A+++Y M
Sbjct: 61 ---------------------------RISKRNLFLWNVMIRGYAWNGPYELAISLYYQM 93
Query: 279 LCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRI 338
G+ P+ ++ AC A EG +IH ++++G + F+ A +I YA CG
Sbjct: 94 RDYGLVPDKFTFPFVLKACSALSAMEEGKKIHKDVIRSGLESDVFVGAALIDMYAKCG-- 151
Query: 339 NLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNE 398
+E ARQ+F+ + +RDV W++M++ Y+QN
Sbjct: 152 -----------------------------CVESARQVFDKIDERDVVCWNSMLATYSQNG 182
Query: 399 QPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSA 458
QP+ +L L M G+KP E T V A A +G L +G+ H Y + ND +
Sbjct: 183 QPDESLALCRVMAFNGLKPTEGTFVISIAASADNGLLPQGKELHGYSWRHGFESNDKVKT 242
Query: 459 AIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNI 518
A++DMYAK GS+N A +F + ++ V WNA+I G AMHG AN L ++ ++ K +
Sbjct: 243 ALMDMYAKSGSVNVARSLFELLEEK--RVVSWNAMITGYAMHGHANEALDLFKEM-KGKV 299
Query: 519 KLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAE 578
+ ITF+GVL+ C H GL++ G+ +F+SM S +N+ P ++HY CM+DLLG G+LE+A
Sbjct: 300 LPDHITFVGVLAACSHGGLLNEGKMHFRSMISDFNIWPTVQHYTCMIDLLGHCGRLEEAY 359
Query: 579 EVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAG 638
++I M ++ D +WG LL + +IHGNVE+GE A + L L+P G + V+LSN+YA AG
Sbjct: 360 KLIMEMRVEPDAGVWGALLHSCKIHGNVEMGELALEKLVELEPDDGGNYVILSNMYAQAG 419
Query: 639 RWEDAFSIRKEMRDCGMKR 657
+W+ +R M + G+K+
Sbjct: 420 KWDGVARLRDLMMNKGLKK 438
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 110/479 (22%), Positives = 200/479 (41%), Gaps = 96/479 (20%)
Query: 28 SALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTL 87
S L+ C A+ G+Q+H+ I + G+ N + L+NLY C ++ A +FD S
Sbjct: 6 SLLQSCVVRKAIEPGKQLHARICQVGISFNPLLATKLVNLYCICNSLTNAHLLFDRISKR 65
Query: 88 DPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMR 147
+ N+MI G+A N + A+ ++ MR
Sbjct: 66 NLFLWNVMIR-------------------------------GYAWNGPYELAISLYYQMR 94
Query: 148 ILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLV 207
G++P++ T V+ + L + E + +H VI+ ++ V + L++MY C +
Sbjct: 95 DYGLVPDKFTFPFVLKACSALSAMEEGKKIHKDVIRSGLESDVFVGAALIDMYAKCGCVE 154
Query: 208 EARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVER 267
AR +FD++ ER++V WN ML +++ G +
Sbjct: 155 SARQVFDKIDERDVVCWNSMLATYSQNG-------------------------------Q 183
Query: 268 LSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQAT 327
E+L + R M +G+ P + V I+A +G ++H + GF+ D ++
Sbjct: 184 PDESLALCRVMAFNGLKPTEGTFVISIAASADNGLLPQGKELHGYSWRHGFESNDKVKTA 243
Query: 328 IIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSW 387
++ YA G +N+AR FEL + + SWNA+I G+ +G +A LF M+ +
Sbjct: 244 LMDMYAKSGSVNVARSLFELLEEKRVVSWNAMITGYAMHGHANEALDLFKEMKGK----- 298
Query: 388 SAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLN 447
V P+ IT V V A + G L EG+ +++
Sbjct: 299 ---------------------------VLPDHITFVGVLAACSHGGLLNEGKMHFRSMIS 331
Query: 448 N-SITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANL 505
+ +I +ID+ CG + A+++ +R + W A++ +HG+ +
Sbjct: 332 DFNIWPTVQHYTCMIDLLGHCGRLEEAYKLIMEMRVEPDA-GVWGALLHSCKIHGNVEM 389
>gi|347954470|gb|AEP33735.1| chlororespiratory reduction 21, partial [Olimarabidopsis pumila]
Length = 811
Score = 295 bits (754), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 188/662 (28%), Positives = 319/662 (48%), Gaps = 106/662 (16%)
Query: 42 GQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIR 101
G+ +H + K+GLE F+ +SL ++Y KCG+
Sbjct: 172 GRGVHGYVIKAGLEDCVFVASSLADMYGKCGV---------------------------- 203
Query: 102 NDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASV 161
L+DAR+VFD+ P + V++ ++++G+ QN EA+ +F DMR GV P VT+++
Sbjct: 204 ---LDDARKVFDEIPERNVVAWNALMVGYVQNGMNEEAIRLFSDMRKEGVEPTRVTVSTC 260
Query: 162 ISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNI 221
+S+S ++ G+ E + H + I ++ I+ T+LLN YC
Sbjct: 261 LSASANMVGVEEGKQSHAIAIVNGLELDNILGTSLLNFYC-------------------- 300
Query: 222 VSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCD 281
K GL+E A +F+R+ KDVV+W +I GY+Q + +A+ M + M +
Sbjct: 301 -----------KVGLIEYAEMVFDRMFDKDVVTWNLLISGYVQQGLVEDAIYMSQLMRLE 349
Query: 282 GIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLA 341
+ + V + L+SA R G ++ ++ D + +T + YA CG I A
Sbjct: 350 KLKYDCVTLSTLMSAAARTENLKFGKEVQCYCIRHSLDTDIVLASTTMDMYAKCGSIVDA 409
Query: 342 RLQFELGIKDHIASWNALIAGF-----------------------------------IRN 366
+ F+ ++ + WN L+A + +RN
Sbjct: 410 KKVFDSTVEKDLILWNTLLAAYAQSGLSGEALRLFYEMQLESVPPNVITWNLIILSLLRN 469
Query: 367 GMIEDARQLFNNMQKR----DVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITM 422
G + +A+++F MQ ++ SW+ M++G QN A+ M ++G++PN ++
Sbjct: 470 GEVNEAKEMFLQMQSSGISPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSI 529
Query: 423 VSVFCAIASSGTLKEGRWAHEYVLNN-SITLNDNLSAAIIDMYAKCGSINTAFEVFYHIR 481
A A+ +L GR H Y++ N + + ++ +++DMYAKCG IN A VF
Sbjct: 530 TVALSASANLASLHFGRSIHGYIIRNLRHSSSVSIETSLVDMYAKCGDINKAERVF---G 586
Query: 482 DRTTSVSP-WNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDL 540
+ S P +NA+I A++G+ + +Y LE IK +S+TF +LS C HAG +D
Sbjct: 587 SKLYSELPLYNAMISAYALYGNVKEAIALYRSLEDMGIKPDSVTFTSLLSACNHAGDIDQ 646
Query: 541 GERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAAS 600
F +M + + P L+HYG MVDLL AG+ E A +I MP K D + +L+A+
Sbjct: 647 AVGVFTAMVLKHGMTPCLEHYGLMVDLLASAGETEKAIRLIEEMPYKPDARMIQSLVASC 706
Query: 601 RIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPG 660
E+ E ++ L +P + + V +SN YA G W++ +R+ M+ G+K+ PG
Sbjct: 707 NKQHKTELVEYLSRHLLESEPENSGNYVTISNAYAVEGSWDEVVKMREMMKAKGLKKKPG 766
Query: 661 FS 662
S
Sbjct: 767 CS 768
Score = 161 bits (408), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 130/557 (23%), Positives = 244/557 (43%), Gaps = 98/557 (17%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSG--LESNTFIQNSLINLYAKCGLISQAKSMFDSCSTL 87
L+ C +S G+QIH+ I K+G N +I+ L+ YAKC
Sbjct: 57 LQGCVYERDLSTGKQIHARILKNGDFYARNEYIETKLVIFYAKC---------------- 100
Query: 88 DPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMR 147
D L A +F K ++ S+ ++I + AL F +M
Sbjct: 101 ---------------DALEXAEVIFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEML 145
Query: 148 ILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLV 207
+ P+ + +V + L R +HG VIK ++ V ++++L +MY C L
Sbjct: 146 ENEIFPDNFVVPNVCKACGALQWSRFGRGVHGYVIKAGLEDCVFVASSLADMYGKCGVLD 205
Query: 208 EARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVER 267
+AR +FDE+ ERN+V+WN ++ G+ + G+ E
Sbjct: 206 DARKVFDEIPERNVVAWNALMVGYVQNGMNE----------------------------- 236
Query: 268 LSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQAT 327
EA+ ++ M +G+ P V + +SA + EG Q H+I + G + + + +
Sbjct: 237 --EAIRLFSDMRKEGVEPTRVTVSTCLSASANMVGVEEGKQSHAIAIVNGLELDNILGTS 294
Query: 328 IIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSW 387
+++FY G I A + F+ + +WN LI+G+++ G++EDA + M+
Sbjct: 295 LLNFYCKVGLIEYAEMVFDRMFDKDVVTWNLLISGYVQQGLVEDAIYMSQLMRLEK---- 350
Query: 388 SAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLN 447
+K + +T+ ++ A A + LK G+ Y +
Sbjct: 351 ---------------------------LKYDCVTLSTLMSAAARTENLKFGKEVQCYCIR 383
Query: 448 NSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTL 507
+S+ + L++ +DMYAKCGSI A +VF ++ + WN ++ A G + L
Sbjct: 384 HSLDTDIVLASTTMDMYAKCGSIVDAKKVFDSTVEKDLIL--WNTLLAAYAQSGLSGEAL 441
Query: 508 KIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDL 567
+++ +++ ++ N IT+ ++ + G V+ + F M+S + P+L + M++
Sbjct: 442 RLFYEMQLESVPPNVITWNLIILSLLRNGEVNEAKEMFLQMQSS-GISPNLISWTTMMNG 500
Query: 568 LGRAGQLEDAEEVIRSM 584
+ + G E+A +R M
Sbjct: 501 MVQNGCSEEAILFLRKM 517
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 103/428 (24%), Positives = 191/428 (44%), Gaps = 80/428 (18%)
Query: 37 IAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMI 96
+ V +G+Q H++ +GLE + + SL+N Y K GLI A+ +FD D V N++I
Sbjct: 268 VGVEEGKQSHAIAIVNGLELDNILGTSLLNFYCKVGLIEYAEMVFDRMFDKDVVTWNLLI 327
Query: 97 SGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFA--QNDCWREALEVFRDMRILGVIPN 154
SGY++ + DA Y S +M + DC
Sbjct: 328 SGYVQQGLVEDA-------------IYMSQLMRLEKLKYDC------------------- 355
Query: 155 EVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFD 214
VTL++++S++ + + + I+ +D +++++ ++MY C S+V+A+ +FD
Sbjct: 356 -VTLSTLMSAAARTENLKFGKEVQCYCIRHSLDTDIVLASTTMDMYAKCGSIVDAKKVFD 414
Query: 215 EMKERNIVSWNVMLNGFAKAGLVELARELF-----ERIP--------------------- 248
E++++ WN +L +A++GL A LF E +P
Sbjct: 415 STVEKDLILWNTLLAAYAQSGLSGEALRLFYEMQLESVPPNVITWNLIILSLLRNGEVNE 474
Query: 249 -------------SKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLIS 295
S +++SW TM++G +Q EA+ R M G+ PN I +S
Sbjct: 475 AKEMFLQMQSSGISPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALS 534
Query: 296 ACGRAMAFGEGLQIHSIIVKAGFDCYDF-IQATIIHFYAACGRINLARLQFELGIKDHIA 354
A + G IH I++ I+ +++ YA CG IN A F + +
Sbjct: 535 ASANLASLHFGRSIHGYIIRNLRHSSSVSIETSLVDMYAKCGDINKAERVFGSKLYSELP 594
Query: 355 SWNALIAGFIRNGMIEDARQLFNNMQ----KRDVYSWSAMISGYAQNEQPNMALELFHGM 410
+NA+I+ + G +++A L+ +++ K D ++++++S + A+ +F M
Sbjct: 595 LYNAMISAYALYGNVKEAIALYRSLEDMGIKPDSVTFTSLLSACNHAGDIDQAVGVFTAM 654
Query: 411 V-DAGVKP 417
V G+ P
Sbjct: 655 VLKHGMTP 662
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/371 (24%), Positives = 179/371 (48%), Gaps = 39/371 (10%)
Query: 231 FAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMI 290
+AK +E A +F ++ ++V SW +I ++ AL + ML + I P++ ++
Sbjct: 97 YAKCDALEXAEVIFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVV 156
Query: 291 VDLISACGRAM--AFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELG 348
++ ACG FG G +H ++KAG + F+ +++ Y CG ++ AR F+
Sbjct: 157 PNVCKACGALQWSRFGRG--VHGYVIKAGLEDCVFVASSLADMYGKCGVLDDARKVFDEI 214
Query: 349 IKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFH 408
+ ++ +WNAL+ G+++NGM E+A +LF++M+K
Sbjct: 215 PERNVVAWNALMVGYVQNGMNEEAIRLFSDMRKE-------------------------- 248
Query: 409 GMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCG 468
GV+P +T+ + A A+ ++EG+ +H + N + L++ L ++++ Y K G
Sbjct: 249 -----GVEPTRVTVSTCLSASANMVGVEEGKQSHAIAIVNGLELDNILGTSLLNFYCKVG 303
Query: 469 SINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGV 528
I A VF + D+ V WN +I G G + + + +K + +T +
Sbjct: 304 LIEYAEMVFDRMFDK--DVVTWNLLISGYVQQGLVEDAIYMSQLMRLEKLKYDCVTLSTL 361
Query: 529 LSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKA 588
+S + G+ + ++++ D+ +D+ + G + DA++V S ++
Sbjct: 362 MSAAARTENLKFGKE-VQCYCIRHSLDTDIVLASTTMDMYAKCGSIVDAKKVFDS-TVEK 419
Query: 589 DVVIWGTLLAA 599
D+++W TLLAA
Sbjct: 420 DLILWNTLLAA 430
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 142/319 (44%), Gaps = 39/319 (12%)
Query: 292 DLISACGRAMAFGEGLQIHSIIVKAGFDCY---DFIQATIIHFYAACGRINLARLQFELG 348
+ + C G QIH+ I+K G D Y ++I+ ++ FYA C
Sbjct: 55 EXLQGCVYERDLSTGKQIHARILKNG-DFYARNEYIETKLVIFYAKCD------------ 101
Query: 349 IKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFH 408
+E A +F+ ++ R+V+SW+A+I + AL F
Sbjct: 102 -------------------ALEXAEVIFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFV 142
Query: 409 GMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCG 468
M++ + P+ + +V A + + GR H YV+ + +++++ DMY KCG
Sbjct: 143 EMLENEIFPDNFVVPNVCKACGALQWSRFGRGVHGYVIKAGLEDCVFVASSLADMYGKCG 202
Query: 469 SINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGV 528
++ A +VF I +R +V WNA++ G +G ++++SD+ K ++ +T
Sbjct: 203 VLDDARKVFDEIPER--NVVAWNALMVGYVQNGMNEEAIRLFSDMRKEGVEPTRVTVSTC 260
Query: 529 LSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKA 588
LS + V+ G++ ++ V +E D +++ + G +E AE V M
Sbjct: 261 LSASANMVGVEEGKQS-HAIAIVNGLELDNILGTSLLNFYCKVGLIEYAEMVFDRM-FDK 318
Query: 589 DVVIWGTLLAASRIHGNVE 607
DVV W L++ G VE
Sbjct: 319 DVVTWNLLISGYVQQGLVE 337
>gi|347954468|gb|AEP33734.1| chlororespiratory reduction 21, partial [Lepidium virginicum]
Length = 788
Score = 295 bits (754), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 185/662 (27%), Positives = 319/662 (48%), Gaps = 106/662 (16%)
Query: 42 GQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIR 101
G+ +H + K+GL F+ +SL ++Y KCG+
Sbjct: 152 GRGVHGYLVKAGLHDCVFVASSLADMYGKCGV---------------------------- 183
Query: 102 NDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASV 161
LNDAR+VFDK P + V++ ++++G+ QN EA+ + DMR G+ P VT+++
Sbjct: 184 ---LNDARKVFDKIPERNVVAWNALMVGYVQNGMNEEAIRLLSDMRKEGIEPTRVTVSTC 240
Query: 162 ISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNI 221
+S+S ++ GI E + H + I ++ I+ T++LN YC
Sbjct: 241 LSASANIRGIEEGKQSHAIAIVNGLEMDNILGTSILNFYC-------------------- 280
Query: 222 VSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCD 281
K GLVE A +F+R+ KDVV+W +I GY+Q + +A+ M + M +
Sbjct: 281 -----------KVGLVEYAEMIFDRMIEKDVVTWNLLISGYVQQGLVDDAIHMCKLMRLE 329
Query: 282 GIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLA 341
+ + V + L+SA R G ++ ++ F+ + +T + YA CG I A
Sbjct: 330 NLRYDSVTLSTLMSAAARTHNLKLGKEVQCYCIRHCFESEIVLASTAVDMYAKCGSIVDA 389
Query: 342 RLQFELGIKDHIASWNALIAGF-----------------------------------IRN 366
+ F+ ++ + WN L+A + +RN
Sbjct: 390 KKVFDSTVEKDLILWNTLLAAYADSGLSGEALRLFYDMQLESVPPNMITWNSIILSLLRN 449
Query: 367 GMIEDARQLFNNMQKRDVY----SWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITM 422
G +++A+++F MQ ++ SW+ M++G QN A+ M ++G++PN ++
Sbjct: 450 GQVDEAKEMFLQMQSSGIFPNLISWTTMMNGLVQNGCSEEAINFLRKMQESGLRPNSFSI 509
Query: 423 VSVFCAIASSGTLKEGRWAHEYVLNN-SITLNDNLSAAIIDMYAKCGSINTAFEVF-YHI 480
A A +L GR H Y++ N + + + +++DMYAKCG IN A + F +
Sbjct: 510 TVALSACAHLASLNFGRSIHGYIIRNLQHSSSVSFVTSLVDMYAKCGDINQAEKAFGSKL 569
Query: 481 RDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDL 540
D + +NA+I A++G+ + +Y LE IK +SITF +LS C HAG +
Sbjct: 570 YDE---LPLYNAMISAYALYGNMKEAIALYRRLEDMAIKPDSITFTSLLSACSHAGDIVQ 626
Query: 541 GERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAAS 600
F M S + ++P L+HYG MVDLL +G+ A E+I+ MP K D + +L+A++
Sbjct: 627 AINIFTEMVSKHGMKPCLEHYGLMVDLLASSGETNKALELIKEMPYKPDARMIQSLVASN 686
Query: 601 RIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPG 660
E+ + +K L +P + + V +SN +A G W++ +R+ M+ G+K+ PG
Sbjct: 687 NKQHKTELVDYLSKQLLESEPENSGNYVTISNAFAIEGSWDEVVKMREMMKAKGLKKKPG 746
Query: 661 FS 662
S
Sbjct: 747 CS 748
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 137/560 (24%), Positives = 246/560 (43%), Gaps = 104/560 (18%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSG--LESNTFIQNSLINLYAKCGLISQAKSMFDSCSTL 87
L+ C + GQQIH+ I K+G N +I+ L+ YAKC I A+++F
Sbjct: 37 LQGCVYERDLCTGQQIHARILKNGDFYARNQYIETKLLIFYAKCDAIEVAQNLFS----- 91
Query: 88 DPVACNIMISGYIRNDRLNDAREVFDKTPI---KCCVSYTSMIMGFAQNDCWREALEVFR 144
RL R VF I KC + G + AL F
Sbjct: 92 ----------------RLR-VRNVFSWAAIIGLKCRI-------GLCEG-----ALTGFV 122
Query: 145 DMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCS 204
+M GV+P+ + +V + L W R +HG ++K + V ++++L +MY C
Sbjct: 123 EMIENGVLPDNYVVPNVCKACGALQWTWFGRGVHGYLVKAGLHDCVFVASSLADMYGKCG 182
Query: 205 SLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQ 264
L +AR +FD++ ERN+V+WN ++ G+ + G+ E
Sbjct: 183 VLNDARKVFDKIPERNVVAWNALMVGYVQNGMNE-------------------------- 216
Query: 265 VERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFI 324
EA+ + M +GI P V + +SA EG Q H+I + G + + +
Sbjct: 217 -----EAIRLLSDMRKEGIEPTRVTVSTCLSASANIRGIEEGKQSHAIAIVNGLEMDNIL 271
Query: 325 QATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDV 384
+I++FY G + A + F+ I+ + +WN LI+G+++ G+++DA + M+ +
Sbjct: 272 GTSILNFYCKVGLVEYAEMIFDRMIEKDVVTWNLLISGYVQQGLVDDAIHMCKLMRLEN- 330
Query: 385 YSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEY 444
++ + +T+ ++ A A + LK G+ Y
Sbjct: 331 ------------------------------LRYDSVTLSTLMSAAARTHNLKLGKEVQCY 360
Query: 445 VLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDAN 504
+ + L++ +DMYAKCGSI A +VF ++ + WN ++ A G +
Sbjct: 361 CIRHCFESEIVLASTAVDMYAKCGSIVDAKKVFDSTVEKDLIL--WNTLLAAYADSGLSG 418
Query: 505 LTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCM 564
L+++ D++ ++ N IT+ ++ + G VD + F M+S + P+L + M
Sbjct: 419 EALRLFYDMQLESVPPNMITWNSIILSLLRNGQVDEAKEMFLQMQSS-GIFPNLISWTTM 477
Query: 565 VDLLGRAGQLEDAEEVIRSM 584
++ L + G E+A +R M
Sbjct: 478 MNGLVQNGCSEEAINFLRKM 497
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 94/372 (25%), Positives = 186/372 (50%), Gaps = 41/372 (11%)
Query: 231 FAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMI 290
+AK +E+A+ LF R+ ++V SW +I ++ ALT + M+ +G+ P++ ++
Sbjct: 77 YAKCDAIEVAQNLFSRLRVRNVFSWAAIIGLKCRIGLCEGALTGFVEMIENGVLPDNYVV 136
Query: 291 VDLISACG--RAMAFGEGLQIHSIIVKAGF-DCYDFIQATIIHFYAACGRINLARLQFEL 347
++ ACG + FG G +H +VKAG DC F+ +++ Y CG +N AR F+
Sbjct: 137 PNVCKACGALQWTWFGRG--VHGYLVKAGLHDCV-FVASSLADMYGKCGVLNDARKVFDK 193
Query: 348 GIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELF 407
+ ++ +WNAL+ G+++NGM E+A +L ++M+K
Sbjct: 194 IPERNVVAWNALMVGYVQNGMNEEAIRLLSDMRKE------------------------- 228
Query: 408 HGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKC 467
G++P +T+ + A A+ ++EG+ +H + N + +++ L +I++ Y K
Sbjct: 229 ------GIEPTRVTVSTCLSASANIRGIEEGKQSHAIAIVNGLEMDNILGTSILNFYCKV 282
Query: 468 GSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIG 527
G + A +F + ++ V WN +I G G + + + + N++ +S+T
Sbjct: 283 GLVEYAEMIFDRMIEK--DVVTWNLLISGYVQQGLVDDAIHMCKLMRLENLRYDSVTLST 340
Query: 528 VLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMK 587
++S + LG+ + + E ++ VD+ + G + DA++V S ++
Sbjct: 341 LMSAAARTHNLKLGKE-VQCYCIRHCFESEIVLASTAVDMYAKCGSIVDAKKVFDS-TVE 398
Query: 588 ADVVIWGTLLAA 599
D+++W TLLAA
Sbjct: 399 KDLILWNTLLAA 410
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 105/438 (23%), Positives = 201/438 (45%), Gaps = 79/438 (18%)
Query: 27 VSALRYCSAHI-AVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCS 85
VS SA+I + +G+Q H++ +GLE + + S++N Y K GL+ A+ +FD
Sbjct: 237 VSTCLSASANIRGIEEGKQSHAIAIVNGLEMDNILGTSILNFYCKVGLVEYAEMIFDRMI 296
Query: 86 TLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRD 145
D V N++ISGY++ ++DA I C +
Sbjct: 297 EKDVVTWNLLISGYVQQGLVDDA--------IHMC-----------------------KL 325
Query: 146 MRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSS 205
MR+ + + VTL++++S++ + + + I+ + +++++ ++MY C S
Sbjct: 326 MRLENLRYDSVTLSTLMSAAARTHNLKLGKEVQCYCIRHCFESEIVLASTAVDMYAKCGS 385
Query: 206 LVEARSLFDEMKERNIVSWNVMLNGFAKAGL----------------------------- 236
+V+A+ +FD E++++ WN +L +A +GL
Sbjct: 386 IVDAKKVFDSTVEKDLILWNTLLAAYADSGLSGEALRLFYDMQLESVPPNMITWNSIILS 445
Query: 237 ------VELARELFERIPSK----DVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPN 286
V+ A+E+F ++ S +++SW TM++G +Q EA+ R M G+ PN
Sbjct: 446 LLRNGQVDEAKEMFLQMQSSGIFPNLISWTTMMNGLVQNGCSEEAINFLRKMQESGLRPN 505
Query: 287 DVMIVDLISACGRAMAFGEGLQIHSIIVK--AGFDCYDFIQATIIHFYAACGRINLARLQ 344
I +SAC + G IH I++ F+ +++ YA CG IN A
Sbjct: 506 SFSITVALSACAHLASLNFGRSIHGYIIRNLQHSSSVSFV-TSLVDMYAKCGDINQAEKA 564
Query: 345 FELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ----KRDVYSWSAMISGYAQNEQP 400
F + D + +NA+I+ + G +++A L+ ++ K D ++++++S +
Sbjct: 565 FGSKLYDELPLYNAMISAYALYGNMKEAIALYRRLEDMAIKPDSITFTSLLSACSHAGDI 624
Query: 401 NMALELFHGMVDA-GVKP 417
A+ +F MV G+KP
Sbjct: 625 VQAINIFTEMVSKHGMKP 642
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/344 (24%), Positives = 153/344 (44%), Gaps = 39/344 (11%)
Query: 267 RLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCY---DF 323
+ EAL + + M + + +++ C G QIH+ I+K G D Y +
Sbjct: 10 EIREALRLVKEMEFRNVRIGPEIYGEILQGCVYERDLCTGQQIHARILKNG-DFYARNQY 68
Query: 324 IQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRD 383
I+ ++ FYA C IE A+ LF+ ++ R+
Sbjct: 69 IETKLLIFYAKCD-------------------------------AIEVAQNLFSRLRVRN 97
Query: 384 VYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHE 443
V+SW+A+I + AL F M++ GV P+ + +V A + GR H
Sbjct: 98 VFSWAAIIGLKCRIGLCEGALTGFVEMIENGVLPDNYVVPNVCKACGALQWTWFGRGVHG 157
Query: 444 YVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDA 503
Y++ + +++++ DMY KCG +N A +VF I +R +V WNA++ G +G
Sbjct: 158 YLVKAGLHDCVFVASSLADMYGKCGVLNDARKVFDKIPER--NVVAWNALMVGYVQNGMN 215
Query: 504 NLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGC 563
+++ SD+ K I+ +T LS + ++ G++ ++ V +E D
Sbjct: 216 EEAIRLLSDMRKEGIEPTRVTVSTCLSASANIRGIEEGKQS-HAIAIVNGLEMDNILGTS 274
Query: 564 MVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVE 607
+++ + G +E AE + M ++ DVV W L++ G V+
Sbjct: 275 ILNFYCKVGLVEYAEMIFDRM-IEKDVVTWNLLISGYVQQGLVD 317
>gi|125557011|gb|EAZ02547.1| hypothetical protein OsI_24658 [Oryza sativa Indica Group]
Length = 635
Score = 295 bits (754), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 158/435 (36%), Positives = 245/435 (56%), Gaps = 6/435 (1%)
Query: 231 FAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMI 290
+A + ++L L P V + + I + AL + ML G+ P +
Sbjct: 77 YAASDRLDLTVTLLRLTPDPTTVFYTSAIHAHSSRGLHLAALALLSEMLGRGLIPTSHTL 136
Query: 291 VDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIK 350
+ AC +A G L ++ + D Y + ++ YA G + AR F+
Sbjct: 137 SSSLPAC-HGLALGRALHAYAFKLALAGDSY--VATALLGMYARGGDADAARALFDEMPD 193
Query: 351 DHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGM 410
H+ A++ + + G ++DAR+LF+ M +D W+AMI GY Q+ +PN AL LF M
Sbjct: 194 PHVVPVTAMLTCYAKMGALDDARELFDGMPSKDFICWNAMIDGYTQHGRPNEALRLFRWM 253
Query: 411 VDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNS-ITLNDNLSAAIIDMYAKCGS 469
+ +GV P+E+ ++ A+A GT + GRW H YV N+ + LN + A+IDMY KCGS
Sbjct: 254 LRSGVDPDEVAIILALSAVAQLGTAESGRWLHSYVKNSRRVQLNARVGTALIDMYCKCGS 313
Query: 470 INTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVL 529
+ A VF I D+ V WNA+I G AMHGD+ L+++S L + + ITFIG+L
Sbjct: 314 LEDAVSVFNSIGDKDIVV--WNAMINGYAMHGDSRKALEMFSQLRSQGLWPTDITFIGLL 371
Query: 530 STCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKAD 589
+ C H+GLVD G ++F+SM+ Y + P ++HYGCMVDLLGRAG +E+A +++SM + D
Sbjct: 372 NACSHSGLVDEGHQFFQSMEEEYAIVPKIEHYGCMVDLLGRAGLIEEAFHLVQSMTIAPD 431
Query: 590 VVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKE 649
V+W +LLAA R+H N+ +G++ A L ++ +LLSNIYA G WE+ +R
Sbjct: 432 TVMWVSLLAACRLHKNMALGQQIADYLVAGGLANSGMYILLSNIYAAVGNWEEVARVRSM 491
Query: 650 MRDCGMKRLPGFSGV 664
M+ G+++ PG S +
Sbjct: 492 MKASGIQKEPGCSAI 506
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 122/419 (29%), Positives = 198/419 (47%), Gaps = 49/419 (11%)
Query: 99 YIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTL 158
Y +DRL+ + TP V YTS I + AL + +M G+IP TL
Sbjct: 77 YAASDRLDLTVTLLRLTPDPTTVFYTSAIHAHSSRGLHLAALALLSEMLGRGLIPTSHTL 136
Query: 159 ASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKE 218
+S + + G+ R LH KL + G ++T LL MY AR+LFDEM +
Sbjct: 137 SSSLPAC---HGLALGRALHAYAFKLALAGDSYVATALLGMYARGGDADAARALFDEMPD 193
Query: 219 RNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAM 278
++V ML +AK G ++ ARELF+ +PSKD + W MIDGY Q R +EAL ++R M
Sbjct: 194 PHVVPVTAMLTCYAKMGALDDARELFDGMPSKDFICWNAMIDGYTQHGRPNEALRLFRWM 253
Query: 279 LCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRI 338
L G+ P++V I+ +SA + G +HS +
Sbjct: 254 LRSGVDPDEVAIILALSAVAQLGTAESGRWLHSYVK------------------------ 289
Query: 339 NLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNE 398
N R+Q + ALI + + G +EDA +FN++ +D+ W+AMI+GYA +
Sbjct: 290 NSRRVQLNARVG------TALIDMYCKCGSLEDAVSVFNSIGDKDIVVWNAMINGYAMHG 343
Query: 399 QPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLN----NSITLND 454
ALE+F + G+ P +IT + + A + SG + EG H++ + +I
Sbjct: 344 DSRKALEMFSQLRSQGLWPTDITFIGLLNACSHSGLVDEG---HQFFQSMEEEYAIVPKI 400
Query: 455 NLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSP----WNAIICGLAMHGDANLTLKI 509
++D+ + G I AF + ++ +++P W +++ +H + L +I
Sbjct: 401 EHYGCMVDLLGRAGLIEEAFHLV-----QSMTIAPDTVMWVSLLAACRLHKNMALGQQI 454
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 104/383 (27%), Positives = 175/383 (45%), Gaps = 72/383 (18%)
Query: 26 LVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCS 85
L S+L C ++ G+ +H+ FK L ++++ +L+ +YA+ G A+++FD
Sbjct: 136 LSSSLPACHG---LALGRALHAYAFKLALAGDSYVATALLGMYARGGDADAARALFDEMP 192
Query: 86 TLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRD 145
V M++ Y + L+DARE+FD P K + + +MI G+ Q+ EAL +FR
Sbjct: 193 DPHVVPVTAMLTCYAKMGALDDARELFDGMPSKDFICWNAMIDGYTQHGRPNEALRLFRW 252
Query: 146 MRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVI---KLMIDGFVIISTNLLNMYCV 202
M GV P+EV + +S+ LG R LH V ++ ++ V T L++MYC
Sbjct: 253 MLRSGVDPDEVAIILALSAVAQLGTAESGRWLHSYVKNSRRVQLNARV--GTALIDMYCK 310
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
C SL +A S+F+ + +++IV WN M+NG+A G A E+F ++ S+
Sbjct: 311 CGSLEDAVSVFNSIGDKDIVVWNAMINGYAMHGDSRKALEMFSQLRSQ------------ 358
Query: 263 LQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD 322
G+ P D+ + L++AC HS +V G +
Sbjct: 359 -------------------GLWPTDITFIGLLNACS-----------HSGLVDEG---HQ 385
Query: 323 FIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ-K 381
F Q+ ++ E I I + ++ R G+IE+A L +M
Sbjct: 386 FFQS----------------MEEEYAIVPKIEHYGCMVDLLGRAGLIEEAFHLVQSMTIA 429
Query: 382 RDVYSWSAMISGYAQNEQPNMAL 404
D W ++++ A NMAL
Sbjct: 430 PDTVMWVSLLA--ACRLHKNMAL 450
>gi|115470299|ref|NP_001058748.1| Os07g0113500 [Oryza sativa Japonica Group]
gi|22831309|dbj|BAC16163.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|24414055|dbj|BAC22304.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113610284|dbj|BAF20662.1| Os07g0113500 [Oryza sativa Japonica Group]
gi|125598898|gb|EAZ38474.1| hypothetical protein OsJ_22862 [Oryza sativa Japonica Group]
Length = 634
Score = 295 bits (754), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 158/435 (36%), Positives = 245/435 (56%), Gaps = 6/435 (1%)
Query: 231 FAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMI 290
+A + ++L L P V + + I + AL + ML G+ P +
Sbjct: 76 YAASDRLDLTVTLLRLTPDPTTVFYTSAIHAHSSRGLHLAALALLSEMLGRGLIPTSHTL 135
Query: 291 VDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIK 350
+ AC +A G L ++ + D Y + ++ YA G + AR F+
Sbjct: 136 SSSLPAC-HGLALGRALHAYAFKLALAGDSY--VATALLGMYARGGDADAARALFDEMPD 192
Query: 351 DHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGM 410
H+ A++ + + G ++DAR+LF+ M +D W+AMI GY Q+ +PN AL LF M
Sbjct: 193 PHVVPVTAMLTCYAKMGALDDARELFDGMPSKDFICWNAMIDGYTQHGRPNEALRLFRWM 252
Query: 411 VDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNS-ITLNDNLSAAIIDMYAKCGS 469
+ +GV P+E+ ++ A+A GT + GRW H YV N+ + LN + A+IDMY KCGS
Sbjct: 253 LRSGVDPDEVAIILALSAVAQLGTAESGRWLHSYVKNSRRVQLNARVGTALIDMYCKCGS 312
Query: 470 INTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVL 529
+ A VF I D+ V WNA+I G AMHGD+ L+++S L + + ITFIG+L
Sbjct: 313 LEDAVSVFNSIGDKDIVV--WNAMINGYAMHGDSRKALEMFSQLRSQGLWPTDITFIGLL 370
Query: 530 STCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKAD 589
+ C H+GLVD G ++F+SM+ Y + P ++HYGCMVDLLGRAG +E+A +++SM + D
Sbjct: 371 NACSHSGLVDEGHQFFQSMEEEYAIVPKIEHYGCMVDLLGRAGLIEEAFHLVQSMTIAPD 430
Query: 590 VVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKE 649
V+W +LLAA R+H N+ +G++ A L ++ +LLSNIYA G WE+ +R
Sbjct: 431 TVMWVSLLAACRLHKNMALGQQIADYLVAGGLANSGMYILLSNIYAAVGNWEEVARVRSM 490
Query: 650 MRDCGMKRLPGFSGV 664
M+ G+++ PG S +
Sbjct: 491 MKASGIQKEPGCSAI 505
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 122/419 (29%), Positives = 198/419 (47%), Gaps = 49/419 (11%)
Query: 99 YIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTL 158
Y +DRL+ + TP V YTS I + AL + +M G+IP TL
Sbjct: 76 YAASDRLDLTVTLLRLTPDPTTVFYTSAIHAHSSRGLHLAALALLSEMLGRGLIPTSHTL 135
Query: 159 ASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKE 218
+S + + G+ R LH KL + G ++T LL MY AR+LFDEM +
Sbjct: 136 SSSLPAC---HGLALGRALHAYAFKLALAGDSYVATALLGMYARGGDADAARALFDEMPD 192
Query: 219 RNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAM 278
++V ML +AK G ++ ARELF+ +PSKD + W MIDGY Q R +EAL ++R M
Sbjct: 193 PHVVPVTAMLTCYAKMGALDDARELFDGMPSKDFICWNAMIDGYTQHGRPNEALRLFRWM 252
Query: 279 LCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRI 338
L G+ P++V I+ +SA + G +HS +
Sbjct: 253 LRSGVDPDEVAIILALSAVAQLGTAESGRWLHSYVK------------------------ 288
Query: 339 NLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNE 398
N R+Q + ALI + + G +EDA +FN++ +D+ W+AMI+GYA +
Sbjct: 289 NSRRVQLNARVG------TALIDMYCKCGSLEDAVSVFNSIGDKDIVVWNAMINGYAMHG 342
Query: 399 QPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLN----NSITLND 454
ALE+F + G+ P +IT + + A + SG + EG H++ + +I
Sbjct: 343 DSRKALEMFSQLRSQGLWPTDITFIGLLNACSHSGLVDEG---HQFFQSMEEEYAIVPKI 399
Query: 455 NLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSP----WNAIICGLAMHGDANLTLKI 509
++D+ + G I AF + ++ +++P W +++ +H + L +I
Sbjct: 400 EHYGCMVDLLGRAGLIEEAFHLV-----QSMTIAPDTVMWVSLLAACRLHKNMALGQQI 453
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 104/383 (27%), Positives = 175/383 (45%), Gaps = 72/383 (18%)
Query: 26 LVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCS 85
L S+L C ++ G+ +H+ FK L ++++ +L+ +YA+ G A+++FD
Sbjct: 135 LSSSLPACHG---LALGRALHAYAFKLALAGDSYVATALLGMYARGGDADAARALFDEMP 191
Query: 86 TLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRD 145
V M++ Y + L+DARE+FD P K + + +MI G+ Q+ EAL +FR
Sbjct: 192 DPHVVPVTAMLTCYAKMGALDDARELFDGMPSKDFICWNAMIDGYTQHGRPNEALRLFRW 251
Query: 146 MRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVI---KLMIDGFVIISTNLLNMYCV 202
M GV P+EV + +S+ LG R LH V ++ ++ V T L++MYC
Sbjct: 252 MLRSGVDPDEVAIILALSAVAQLGTAESGRWLHSYVKNSRRVQLNARV--GTALIDMYCK 309
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
C SL +A S+F+ + +++IV WN M+NG+A G A E+F ++ S+
Sbjct: 310 CGSLEDAVSVFNSIGDKDIVVWNAMINGYAMHGDSRKALEMFSQLRSQ------------ 357
Query: 263 LQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD 322
G+ P D+ + L++AC HS +V G +
Sbjct: 358 -------------------GLWPTDITFIGLLNACS-----------HSGLVDEG---HQ 384
Query: 323 FIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ-K 381
F Q+ ++ E I I + ++ R G+IE+A L +M
Sbjct: 385 FFQS----------------MEEEYAIVPKIEHYGCMVDLLGRAGLIEEAFHLVQSMTIA 428
Query: 382 RDVYSWSAMISGYAQNEQPNMAL 404
D W ++++ A NMAL
Sbjct: 429 PDTVMWVSLLA--ACRLHKNMAL 449
>gi|255581953|ref|XP_002531775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528611|gb|EEF30631.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 498
Score = 295 bits (754), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 157/436 (36%), Positives = 245/436 (56%), Gaps = 2/436 (0%)
Query: 227 MLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPN 286
+L + + AR +FERIP DV + TMI G + +R ++L ++ +L + P+
Sbjct: 27 LLESYVTMSEISYARSIFERIPYLDVFVYNTMIRGLMLGKRPYDSLLLFNELLLGCLKPD 86
Query: 287 DVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFE 346
+ ++ AC A EG Q+H I+KAG I +++IH Y + G I A
Sbjct: 87 NYTYTFVLKACSNQKALPEGKQVHCQIIKAGISPNTHIHSSLIHMYTSSGSIVEAECVLR 146
Query: 347 LGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALEL 406
+++ + N++I+G++ G ++ AR +F+ M+ +DV SWSA+I+G +N AL L
Sbjct: 147 EFSEENTLAKNSMISGYLSKGHVDKARAMFDQMKAKDVASWSAIITGCTKNGMHTEALAL 206
Query: 407 FHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAK 466
F M+ + PNE +VS+ A A G L +GRW H Y+ ++ LS A+IDMYAK
Sbjct: 207 FEDMMVSHTLPNESALVSLLSACAHLGALHQGRWIHAYIDRIGADMSIRLSTALIDMYAK 266
Query: 467 CGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFI 526
CG I + ++ F + R + W AII G A++G A +++ ++ I N + F+
Sbjct: 267 CGDIQSGYKFFRKMPRR--DIVTWGAIISGFAIYGQAKKCFELFEEMLADGIYPNGVIFV 324
Query: 527 GVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPM 586
+LS C HAG V+ G+ YF M + P ++HYGCMVDLLGRAG+L++AEE I SMP
Sbjct: 325 AILSACSHAGYVEEGKLYFNQMMVDLGIRPSIEHYGCMVDLLGRAGRLKEAEEFIISMPE 384
Query: 587 KADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSI 646
K + VIWG++L+A R H ++ G A + L L+P G L ++ +AG ++A I
Sbjct: 385 KPNSVIWGSMLSACRTHNDLNRGSWAFRHLIELEPRSGDRYKLAGLMFGNAGEKQEATKI 444
Query: 647 RKEMRDCGMKRLPGFS 662
RK + D GM+ G S
Sbjct: 445 RKMIEDQGMETTSGSS 460
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 128/522 (24%), Positives = 215/522 (41%), Gaps = 108/522 (20%)
Query: 2 PLDHFHSVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQ 61
P D L+ +Y V L+ CS A+ +G+Q+H I K+G+ NT I
Sbjct: 68 PYDSLLLFNELLLGCLKPDNYTYTFV--LKACSNQKALPEGKQVHCQIIKAGISPNTHIH 125
Query: 62 NSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCV 121
+SLI++Y G I +A+ + S + +A N MISGY+ ++ AR +FD+ K
Sbjct: 126 SSLIHMYTSSGSIVEAECVLREFSEENTLAKNSMISGYLSKGHVDKARAMFDQMKAKDVA 185
Query: 122 SYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLV 181
S++++I G +N EAL +F DM + +PNE L S++S+ HLG + + R +H +
Sbjct: 186 SWSAIITGCTKNGMHTEALALFEDMMVSHTLPNESALVSLLSACAHLGALHQGRWIHAYI 245
Query: 182 IKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELAR 241
++ D + +ST L++MY C + F +M R+IV+W +++GFA G +
Sbjct: 246 DRIGADMSIRLSTALIDMYAKCGDIQSGYKFFRKMPRRDIVTWGAIISGFAIYGQAKKCF 305
Query: 242 ELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAM 301
ELFE ML DGI PN V+ V ++SAC A
Sbjct: 306 ELFEE-------------------------------MLADGIYPNGVIFVAILSACSHAG 334
Query: 302 AFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIA 361
Y G++ ++ +LGI+ I + ++
Sbjct: 335 ------------------------------YVEEGKLYFNQMMVDLGIRPSIEHYGCMVD 364
Query: 362 GFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEIT 421
R G +++A + +M + KPN +
Sbjct: 365 LLGRAGRLKEAEEFIISMPE----------------------------------KPNSVI 390
Query: 422 MVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIR 481
S+ A + L G WA +++ D A + M+ G A ++ I
Sbjct: 391 WGSMLSACRTHNDLNRGSWAFRHLIELEPRSGDRYKLAGL-MFGNAGEKQEATKIRKMIE 449
Query: 482 DR---TTSVSPW-------NAIICGLAMHGDANLTLKIYSDL 513
D+ TTS S + + + G +H +A K++ L
Sbjct: 450 DQGMETTSGSSFIEVDGTIHEFLVGDTIHNEAAEIYKVWKGL 491
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 101/411 (24%), Positives = 188/411 (45%), Gaps = 33/411 (8%)
Query: 95 MISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPN 154
++ Y+ ++ AR +F++ P Y +MI G ++L +F ++ + + P+
Sbjct: 27 LLESYVTMSEISYARSIFERIPYLDVFVYNTMIRGLMLGKRPYDSLLLFNELLLGCLKPD 86
Query: 155 EVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFD 214
T V+ + + + E + +H +IK I I ++L++MY S+VEA +
Sbjct: 87 NYTYTFVLKACSNQKALPEGKQVHCQIIKAGISPNTHIHSSLIHMYTSSGSIVEAECVLR 146
Query: 215 EMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTM 274
E E N ++ N M++G+ G V+ AR +F+++ +KDV SW +I G + +EAL +
Sbjct: 147 EFSEENTLAKNSMISGYLSKGHVDKARAMFDQMKAKDVASWSAIITGCTKNGMHTEALAL 206
Query: 275 YRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAA 334
+ M+ PN+ +V L+SAC A +G IH+ I + G D + +I YA
Sbjct: 207 FEDMMVSHTLPNESALVSLLSACAHLGALHQGRWIHAYIDRIGADMSIRLSTALIDMYAK 266
Query: 335 CGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGY 394
CG I F + I +W A+I+GF G
Sbjct: 267 CGDIQSGYKFFRKMPRRDIVTWGAIISGFAIYG--------------------------- 299
Query: 395 AQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGR-WAHEYVLNNSITLN 453
Q ELF M+ G+ PN + V++ A + +G ++EG+ + ++ +++ I +
Sbjct: 300 ----QAKKCFELFEEMLADGIYPNGVIFVAILSACSHAGYVEEGKLYFNQMMVDLGIRPS 355
Query: 454 DNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDAN 504
++D+ + G + A E + ++ SV W +++ H D N
Sbjct: 356 IEHYGCMVDLLGRAGRLKEAEEFIISMPEKPNSV-IWGSMLSACRTHNDLN 405
>gi|147766033|emb|CAN70212.1| hypothetical protein VITISV_038740 [Vitis vinifera]
Length = 724
Score = 295 bits (754), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 162/461 (35%), Positives = 246/461 (53%), Gaps = 38/461 (8%)
Query: 206 LVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQV 265
+V A + + ++V N+++N +AK G ++ AR +F+ +P+KD+V+W +I G+ Q
Sbjct: 108 IVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQN 167
Query: 266 ERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQ 325
R +AL ++ ML G+ PN + L+ A G G Q+H+ +K G+ ++
Sbjct: 168 NRPRDALLLFPQMLRLGLQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVG 227
Query: 326 ATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVY 385
+ ++ YA CG ++ A+L F+ M +
Sbjct: 228 SALVDMYARCGHMDAAQLA-------------------------------FDGMPTKSEV 256
Query: 386 SWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYV 445
SW+A+ISG+A+ + AL L M +P T SVF A AS G L++G+W H ++
Sbjct: 257 SWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVFSACASIGALEQGKWVHAHM 316
Query: 446 LNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDR--TTSVSPWNAIICGLAMHGDA 503
+ + + L + ++DMYAK GSI+ A VF DR V WN ++ G A HG
Sbjct: 317 IKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVF----DRLVKPDVVSWNTMLTGCAQHGLG 372
Query: 504 NLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGC 563
TL + + + I+ N I+F+ VL+ C H+GL+D G YF+ MK Y VEPD+ HY
Sbjct: 373 KETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELMKK-YKVEPDVPHYVT 431
Query: 564 MVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSH 623
VDLLGR G L+ AE IR MP++ +WG LL A R+H N+E+G AA+ L P
Sbjct: 432 FVDLLGRVGLLDRAERFIREMPIEPTAAVWGALLGACRMHKNMELGVYAAERAFELDPHD 491
Query: 624 GPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
R+LLSNIYA AGRW D +RK M++ G+K+ P S V
Sbjct: 492 SGPRMLLSNIYASAGRWRDVAKVRKMMKESGVKKQPACSWV 532
Score = 165 bits (417), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 123/492 (25%), Positives = 213/492 (43%), Gaps = 98/492 (19%)
Query: 21 DYELALVSALRYCSAHIAVSQGQQIHSLIFKSG-LESNTFIQNSLINLYAKCGLISQAKS 79
DY L L+ C+ V QG+ +H+ + S L+++ +QN ++N+YAKCG
Sbjct: 86 DYNL-YSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGC------ 138
Query: 80 MFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREA 139
L+DAR +FD+ P K V++T++I GF+QN+ R+A
Sbjct: 139 -------------------------LDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDA 173
Query: 140 LEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNM 199
L +F M LG+ PN TL+S++ +S G+ LH +K V + + L++M
Sbjct: 174 LLLFPQMLRLGLQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDM 233
Query: 200 YCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMI 259
Y C + A+ FD M ++ VSWN +++G A+ G E A L ++ K+
Sbjct: 234 YARCGHMDAAQLAFDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKN-------- 285
Query: 260 DGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFD 319
P + SAC A +G +H+ ++K+G
Sbjct: 286 -----------------------FQPTHFTYSSVFSACASIGALEQGKWVHAHMIKSGLK 322
Query: 320 CYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNM 379
FI T++ YA G I+ A+ F+ +K + SWN ++ G ++G+ ++
Sbjct: 323 LIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKE-------- 374
Query: 380 QKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGR 439
L+ F M+ G++PNEI+ + V A + SG L EG
Sbjct: 375 -----------------------TLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGL 411
Query: 440 WAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAM 499
+ E + + + +D+ + G ++ A E F + + W A++ M
Sbjct: 412 YYFELMKKYKVEPDVPHYVTFVDLLGRVGLLDRA-ERFIREMPIEPTAAVWGALLGACRM 470
Query: 500 HGDANLTLKIYS 511
H N+ L +Y+
Sbjct: 471 H--KNMELGVYA 480
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 141/273 (51%), Gaps = 12/273 (4%)
Query: 336 GRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYA 395
GRI A L + +H+ N ++ + + G ++DAR++F+ M +D+ +W+A+I+G++
Sbjct: 106 GRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFS 165
Query: 396 QNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDN 455
QN +P AL LF M+ G++PN T+ S+ A S L G H + L +
Sbjct: 166 QNNRPRDALLLFPQMLRLGLQPNHFTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVY 225
Query: 456 LSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEK 515
+ +A++DMYA+CG ++ A F + T S WNA+I G A G+ L + +++
Sbjct: 226 VGSALVDMYARCGHMDAAQLAFDGM--PTKSEVSWNALISGHARKGEGEHALHLLWKMQR 283
Query: 516 RNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYG----CMVDLLGRA 571
+N + T+ V S C G ++ G+ M ++ LK ++D+ +A
Sbjct: 284 KNFQPTHFTYSSVFSACASIGALEQGKWVHAHM-----IKSGLKLIAFIGNTLLDMYAKA 338
Query: 572 GQLEDAEEVIRSMPMKADVVIWGTLLAASRIHG 604
G ++DA+ V + +K DVV W T+L HG
Sbjct: 339 GSIDDAKRVFDRL-VKPDVVSWNTMLTGCAQHG 370
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 96/224 (42%), Gaps = 34/224 (15%)
Query: 6 FHSVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLI 65
H ++ Q+ N Q + + + S C++ A+ QG+ +H+ + KSGL+ FI N+L+
Sbjct: 275 LHLLWKMQRKNFQPTHFTYS--SVFSACASIGALEQGKWVHAHMIKSGLKLIAFIGNTLL 332
Query: 66 NLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTS 125
++YAK G I AK +FD D VS+ +
Sbjct: 333 DMYAKAGSIDDAKRVFDRLVKPD-------------------------------VVSWNT 361
Query: 126 MIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLM 185
M+ G AQ+ +E L+ F M +G+ PNE++ V+++ H G + E L+ K
Sbjct: 362 MLTGCAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELMKKYK 421
Query: 186 IDGFVIISTNLLNMYCVCSSLVEARSLFDEMK-ERNIVSWNVML 228
++ V +++ L A EM E W +L
Sbjct: 422 VEPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALL 465
>gi|297741128|emb|CBI31859.3| unnamed protein product [Vitis vinifera]
Length = 514
Score = 295 bits (754), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 178/506 (35%), Positives = 274/506 (54%), Gaps = 75/506 (14%)
Query: 159 ASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKE 218
AS ISSS+H+ H L KL + ++ +S L++MY +C L
Sbjct: 39 ASTISSSIHV---------HAL--KLGFESYLFVSNALIHMYAMCGQL------------ 75
Query: 219 RNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAM 278
GFA+ ++F+ + +D+VSW T+I GY Q + E L ++ AM
Sbjct: 76 -----------GFAQ--------KMFDGMLDRDLVSWNTLICGYSQYNKYKEVLRLFDAM 116
Query: 279 LCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRI 338
I + V +V +I AC G+ ++F + + + +
Sbjct: 117 TAANIKADAVTMVKIILACSH---LGD---------------WEFADSMVKYI-----KE 153
Query: 339 NLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNE 398
N + LG N LI + R G + AR+LF+NM KRDV SW++MI+GY+Q
Sbjct: 154 NNLEIDVYLG--------NTLIDMYGRLGNLTAARKLFDNMPKRDVISWTSMITGYSQAS 205
Query: 399 QPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSA 458
Q + A++LF M+ A VKP+++T+ SV A A G L G H Y+ + + + +
Sbjct: 206 QFSDAVKLFQEMMAAKVKPDKVTVASVLSACAHLGKLDVGWAVHHYIRRHGVQADIYVGN 265
Query: 459 AIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNI 518
++IDMY KCG + A EVF+ ++D+ SVS W ++I GLA++G AN L ++S + + +
Sbjct: 266 SLIDMYCKCGMVEKALEVFHRMKDKD-SVS-WTSVISGLAVNGFANSALDLFSQMLREGV 323
Query: 519 KLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAE 578
+ TF+G+L C HAGLV+ G YF+SM+SV+ + P +KHYGC+VDLL R+G ++ A
Sbjct: 324 QPTHGTFVGILLACAHAGLVNKGLEYFESMESVHGLVPAMKHYGCVVDLLSRSGNIDKAY 383
Query: 579 EVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAG 638
E I+ MP+ DVV+W LL+A ++HGNV + E A K L L P + VLLSN YA
Sbjct: 384 EFIKKMPIVPDVVVWRILLSACKLHGNVVLAEIATKRLLELDPCDSGNYVLLSNTYAGVD 443
Query: 639 RWEDAFSIRKEMRDCGMKRLPGFSGV 664
RW+DA +R+ M D +++ G S +
Sbjct: 444 RWDDAMKMRELMEDSDVQKPSGSSSI 469
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 121/485 (24%), Positives = 203/485 (41%), Gaps = 103/485 (21%)
Query: 25 ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSC 84
ALV AL +S +H+L K G ES F+ N+LI++YA CG + A+ MFD
Sbjct: 28 ALVVALTTNINASTISSSIHVHAL--KLGFESYLFVSNALIHMYAMCGQLGFAQKMFDGM 85
Query: 85 STLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFR 144
D V+ N +I GY +Q + ++E L +F
Sbjct: 86 LDRDLVSWNTLICGY-------------------------------SQYNKYKEVLRLFD 114
Query: 145 DMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIK---LMIDGFVIISTNLLNMYC 201
M + + VT+ +I + HLG WE IK L ID V + L++MY
Sbjct: 115 AMTAANIKADAVTMVKIILACSHLGD-WEFADSMVKYIKENNLEID--VYLGNTLIDMYG 171
Query: 202 VCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDG 261
+L AR LFD M +R+++SW M+ G++
Sbjct: 172 RLGNLTAARKLFDNMPKRDVISWTSMITGYS----------------------------- 202
Query: 262 YLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCY 321
Q + S+A+ +++ M+ + P+ V + ++SAC G +H I + G
Sbjct: 203 --QASQFSDAVKLFQEMMAAKVKPDKVTVASVLSACAHLGKLDVGWAVHHYIRRHGVQAD 260
Query: 322 DFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQK 381
++ ++I Y CG M+E A ++F+ M+
Sbjct: 261 IYVGNSLIDMYCKCG-------------------------------MVEKALEVFHRMKD 289
Query: 382 RDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWA 441
+D SW+++ISG A N N AL+LF M+ GV+P T V + A A +G + +G
Sbjct: 290 KDSVSWTSVISGLAVNGFANSALDLFSQMLREGVQPTHGTFVGILLACAHAGLVNKGLEY 349
Query: 442 HEYVLN-NSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMH 500
E + + + + ++D+ ++ G+I+ A+E F V W ++ +H
Sbjct: 350 FESMESVHGLVPAMKHYGCVVDLLSRSGNIDKAYE-FIKKMPIVPDVVVWRILLSACKLH 408
Query: 501 GDANL 505
G+ L
Sbjct: 409 GNVVL 413
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 111/267 (41%), Gaps = 48/267 (17%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
++ + S L C+ + G +H I + G++++ ++ NSLI++Y KCG++ +A +F
Sbjct: 226 KVTVASVLSACAHLGKLDVGWAVHHYIRRHGVQADIYVGNSLIDMYCKCGMVEKALEVF- 284
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
R+ D V S+TS+I G A N AL++
Sbjct: 285 --------------------HRMKDKDSV----------SWTSVISGLAVNGFANSALDL 314
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWE-------CRMLHGLVIKLMIDGFVIISTN 195
F M GV P T ++ + H G + + +HGLV + G V+
Sbjct: 315 FSQMLREGVQPTHGTFVGILLACAHAGLVNKGLEYFESMESVHGLVPAMKHYGCVV---- 370
Query: 196 LLNMYCVCSSLVEARSLFDEMK-ERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVS 254
++ ++ +A +M ++V W ++L+ G V LA +R+ D
Sbjct: 371 --DLLSRSGNIDKAYEFIKKMPIVPDVVVWRILLSACKLHGNVVLAEIATKRLLELDPCD 428
Query: 255 WGTMI---DGYLQVERLSEALTMYRAM 278
G + + Y V+R +A+ M M
Sbjct: 429 SGNYVLLSNTYAGVDRWDDAMKMRELM 455
>gi|297738694|emb|CBI27939.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 294 bits (753), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 186/653 (28%), Positives = 304/653 (46%), Gaps = 76/653 (11%)
Query: 12 SQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKC 71
+QK + NS Y L L Y H + +++ IF S + + + + N Y +
Sbjct: 59 NQKLSSANSPYPLQEAVQLFYLMRHTRI----RLNQFIFASLISAAASLGD---NHYGES 111
Query: 72 GLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFA 131
K F+S D + N ++ Y++ + + + F I+ S +++ GF
Sbjct: 112 IHACVCKYGFES----DILISNAFVTMYMKTQSVENGWQFFKAMMIENLASRNNLLSGFC 167
Query: 132 QNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVI 191
+ + + + + G PN T S++ + G + E + +HG VIK I+
Sbjct: 168 DTETCDQGPRILIQLLVEGFEPNMYTFISILKTCASKGDLNEGKAIHGQVIKSGINPDSH 227
Query: 192 ISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKD 251
+ +L+N+Y C S A +F E+ ER++VSW ++ GF G
Sbjct: 228 LWNSLVNVYAKCGSANYACKVFGEIPERDVVSWTALITGFVAEG---------------- 271
Query: 252 VVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHS 311
+G+ L ++ ML +G PN + ++ +C G Q+H+
Sbjct: 272 ---YGS-------------GLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHA 315
Query: 312 IIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIED 371
IVK D DF+ ++ YA + A F IK + +W ++AG+ ++G E
Sbjct: 316 QIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEK 375
Query: 372 ARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIAS 431
A + F MQ+ GVKPNE T+ S +
Sbjct: 376 AVKCFIQMQRE-------------------------------GVKPNEFTLASSLSGCSR 404
Query: 432 SGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWN 491
TL GR H + + + +++A++DMYAKCG + A VF + R T WN
Sbjct: 405 IATLDSGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDT--VSWN 462
Query: 492 AIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSV 551
IICG + HG LK + + + +TFIGVLS C H GL++ G+++F S+ +
Sbjct: 463 TIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKI 522
Query: 552 YNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGER 611
Y + P ++HY CMVD+LGRAG+ + E I M + ++V+IW T+L A ++HGN+E GER
Sbjct: 523 YGITPTIEHYACMVDILGRAGKFHEVESFIEEMKLTSNVLIWETVLGACKMHGNIEFGER 582
Query: 612 AAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
AA L L+P + +LLSN++A G W+D ++R M G+K+ PG S V
Sbjct: 583 AAMKLFELEPEIDSNYILLSNMFAAKGMWDDVTNVRALMSTRGVKKEPGCSWV 635
Score = 152 bits (385), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 121/525 (23%), Positives = 209/525 (39%), Gaps = 70/525 (13%)
Query: 95 MISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPN 154
+++ Y++ + L AR+V ++ PI+ + + +EA+++F MR + N
Sbjct: 30 LVNVYVKCESLQCARQVLEEMPIQDVQQWNQKLSSANSPYPLQEAVQLFYLMRHTRIRLN 89
Query: 155 EVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFD 214
+ AS+IS++ LG +H V K + ++IS + MY S+ F
Sbjct: 90 QFIFASLISAAASLGDNHYGESIHACVCKYGFESDILISNAFVTMYMKTQSVENGWQFFK 149
Query: 215 EMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTM 274
M N+ S N +L+GF E + +
Sbjct: 150 AMMIENLASRNNLLSGFC-------------------------------DTETCDQGPRI 178
Query: 275 YRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAA 334
+L +G PN + ++ C EG IH ++K+G + + ++++ YA
Sbjct: 179 LIQLLVEGFEPNMYTFISILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAK 238
Query: 335 CGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGY 394
CG N A F + + SW ALI GF+ G
Sbjct: 239 CGSANYACKVFGEIPERDVVSWTALITGFVAEGY-------------------------- 272
Query: 395 AQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLND 454
L +F+ M+ G PN T +S+ + +S + G+ H ++ NS+ ND
Sbjct: 273 ------GSGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGND 326
Query: 455 NLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLE 514
+ A++DMYAK + A +F + R + W I+ G A G +K + ++
Sbjct: 327 FVGTALVDMYAKNRFLEDAETIFNRLIKR--DLFAWTVIVAGYAQDGQGEKAVKCFIQMQ 384
Query: 515 KRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQL 574
+ +K N T LS C +D G R SM D+ +VD+ + G +
Sbjct: 385 REGVKPNEFTLASSLSGCSRIATLDSG-RQLHSMAIKAGQSGDMFVASALVDMYAKCGCV 443
Query: 575 EDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGL 619
EDAE V + + D V W T++ HG G +A K+ +
Sbjct: 444 EDAEVVFDGL-VSRDTVSWNTIICGYSQHGQ---GGKALKAFEAM 484
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 102/398 (25%), Positives = 173/398 (43%), Gaps = 41/398 (10%)
Query: 224 WNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGI 283
W+ ++N + K ++ AR++ E +P +DV W + L EA+ ++ M I
Sbjct: 27 WSSLVNVYVKCESLQCARQVLEEMPIQDVQQWNQKLSSANSPYPLQEAVQLFYLMRHTRI 86
Query: 284 APNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARL 343
N + LISA G IH+ + K GF+ I
Sbjct: 87 RLNQFIFASLISAAASLGDNHYGESIHACVCKYGFESDILIS------------------ 128
Query: 344 QFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMA 403
NA + +++ +E+ Q F M ++ S + ++SG+ E +
Sbjct: 129 -------------NAFVTMYMKTQSVENGWQFFKAMMIENLASRNNLLSGFCDTETCDQG 175
Query: 404 LELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDM 463
+ ++ G +PN T +S+ AS G L EG+ H V+ + I + +L +++++
Sbjct: 176 PRILIQLLVEGFEPNMYTFISILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNV 235
Query: 464 YAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSI 523
YAKCGS N A +VF I +R V W A+I G G + L+I++ + N
Sbjct: 236 YAKCGSANYACKVFGEIPER--DVVSWTALITGFVAEGYGS-GLRIFNQMLAEGFNPNMY 292
Query: 524 TFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYG-CMVDLLGRAGQLEDAEEVIR 582
TFI +L +C VDLG++ + V N G +VD+ + LEDAE +
Sbjct: 293 TFISILRSCSSLSDVDLGKQVHAQI--VKNSLDGNDFVGTALVDMYAKNRFLEDAETIFN 350
Query: 583 SMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQ 620
+ +K D+ W ++A G GE+A K +Q
Sbjct: 351 RL-IKRDLFAWTVIVAGYAQDGQ---GEKAVKCFIQMQ 384
>gi|334184919|ref|NP_182060.2| chlororespiratory reduction 4 protein [Arabidopsis thaliana]
gi|218546767|sp|O22137.2|PP202_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g45350, chloroplastic; AltName: Full=Protein
CHLORORESPIRATORY REDUCTION 4; Flags: Precursor
gi|330255448|gb|AEC10542.1| chlororespiratory reduction 4 protein [Arabidopsis thaliana]
Length = 613
Score = 294 bits (753), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 178/519 (34%), Positives = 282/519 (54%), Gaps = 45/519 (8%)
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
GV ++ +L+ V+ + LG + +HG + K + + + L+ +Y C L +
Sbjct: 116 GVSVDKFSLSLVLKACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLS 175
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPS--KDVVSWGTMIDGYLQVER 267
R +FD M +R+ VS+N M++G+ K GL+ ARELF+ +P K+++SW +MI GY Q
Sbjct: 176 RQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQT-- 233
Query: 268 LSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQAT 327
S+ + + + D P DLIS +
Sbjct: 234 -SDGVDIASKLFAD--MPEK----DLIS-----------------------------WNS 257
Query: 328 IIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSW 387
+I Y GRI A+ F++ + + +W +I G+ + G + A+ LF+ M RDV ++
Sbjct: 258 MIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAY 317
Query: 388 SAMISGYAQNEQPNMALELFHGM-VDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVL 446
++M++GY QN+ ALE+F M ++ + P++ T+V V AIA G L + H Y++
Sbjct: 318 NSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIV 377
Query: 447 NNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLT 506
L L A+IDMY+KCGSI A VF I ++ S+ WNA+I GLA+HG
Sbjct: 378 EKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENK--SIDHWNAMIGGLAIHGLGESA 435
Query: 507 LKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVD 566
+ +E+ ++K + ITF+GVL+ C H+GLV G F+ M+ + +EP L+HYGCMVD
Sbjct: 436 FDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVD 495
Query: 567 LLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPS 626
+L R+G +E A+ +I MP++ + VIW T L A H E GE AK L LQ + PS
Sbjct: 496 ILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFETGELVAKHLI-LQAGYNPS 554
Query: 627 R-VLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
VLLSN+YA G W+D +R M++ ++++PG S +
Sbjct: 555 SYVLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWI 593
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 137/458 (29%), Positives = 220/458 (48%), Gaps = 79/458 (17%)
Query: 22 YELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMF 81
+ L+LV L+ CS V G QIH + K+GL S+ F+QN LI LY KCG + ++ MF
Sbjct: 122 FSLSLV--LKACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMF 179
Query: 82 DSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTP--IKCCVSYTSMIMGFAQ-NDCWRE 138
D D V+ N MI GY++ + ARE+FD P +K +S+ SMI G+AQ +D
Sbjct: 180 DRMPKRDSVSYNSMIDGYVKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQTSDGVDI 239
Query: 139 ALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLN 198
A ++F DM P + ++ W MIDG+V
Sbjct: 240 ASKLFADM------PEKDLIS------------WNS----------MIDGYV-------- 263
Query: 199 MYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTM 258
+ +A+ LFD M R++V+W M++G+AK G V A+ LF+++P +DVV++ +M
Sbjct: 264 ---KHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSM 320
Query: 259 IDGYLQVERLSEALTMYRAMLCDG-IAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAG 317
+ GY+Q + EAL ++ M + + P+D +V ++ A + + + +H IV+
Sbjct: 321 MAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQ 380
Query: 318 FDCYDFIQATIIHFYAACGRINLARLQFELGIKDH-IASWNALIAGFIRNGMIEDARQLF 376
F + +I Y+ CG I A L FE GI++ I WNA+I G +G+ E A +
Sbjct: 381 FYLGGKLGVALIDMYSKCGSIQHAMLVFE-GIENKSIDHWNAMIGGLAIHGLGESAFDML 439
Query: 377 NNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLK 436
+++ +KP++IT V V A + SG +K
Sbjct: 440 LQIER-------------------------------LSLKPDDITFVGVLNACSHSGLVK 468
Query: 437 EGRWAHEYV-LNNSITLNDNLSAAIIDMYAKCGSINTA 473
EG E + + I ++D+ ++ GSI A
Sbjct: 469 EGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELA 506
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 102/373 (27%), Positives = 180/373 (48%), Gaps = 31/373 (8%)
Query: 250 KDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQI 309
+D W +I + + +AL + ML +G++ + + ++ AC R G+QI
Sbjct: 84 EDPFLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFVKGGMQI 143
Query: 310 HSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMI 369
H + K G F+Q +I Y CG + L+R F+ K S+N++I G+++ G+I
Sbjct: 144 HGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLI 203
Query: 370 EDARQLFN--NMQKRDVYSWSAMISGYAQ-NEQPNMALELFHGMVDAGVKPNEITMVSVF 426
AR+LF+ M+ +++ SW++MISGYAQ ++ ++A +LF M E ++S
Sbjct: 204 VSARELFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFADM-------PEKDLISWN 256
Query: 427 CAIASSGTLKEGRWAHEYVLNNSITLNDNLS-AAIIDMYAKCGSINTAFEVFYHIRDRTT 485
I G +K GR L + + D ++ A +ID YAK G ++ A +F + R
Sbjct: 257 SMI--DGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHR-- 312
Query: 486 SVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKL-NSITFIGVLSTCCHAGLVDLGERY 544
V +N+++ G + L+I+SD+EK + L + T + VL G R
Sbjct: 313 DVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLG------RL 366
Query: 545 FKSMK-SVYNVEPDLKHYG----CMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAA 599
K++ +Y VE G ++D+ + G ++ A V + K+ + W ++
Sbjct: 367 SKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKS-IDHWNAMIGG 425
Query: 600 SRIHGNVEVGERA 612
IHG +GE A
Sbjct: 426 LAIHG---LGESA 435
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 133/291 (45%), Gaps = 31/291 (10%)
Query: 308 QIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNG 367
QIH ++K G + I+ +A+ R LA + + H+ S++ G
Sbjct: 30 QIHGRLIKTGIIKNSNLTTRIVLAFASSRRPYLADFARCVFHEYHVCSFSF--------G 81
Query: 368 MIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFC 427
+ED + W+A+I ++ + P AL L M++ GV ++ ++ V
Sbjct: 82 EVEDP------------FLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLK 129
Query: 428 AIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSV 487
A + G +K G H ++ + + L +I +Y KCG + + ++F + R SV
Sbjct: 130 ACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKR-DSV 188
Query: 488 SPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCH-AGLVDLGERYFK 546
S +N++I G G +++ DL +K N I++ ++S + VD+ + F
Sbjct: 189 S-YNSMIDGYVKCGLIVSARELF-DLMPMEMK-NLISWNSMISGYAQTSDGVDIASKLFA 245
Query: 547 SMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLL 597
M E DL + M+D + G++EDA+ + MP + DVV W T++
Sbjct: 246 DMP-----EKDLISWNSMIDGYVKHGRIEDAKGLFDVMP-RRDVVTWATMI 290
>gi|449459744|ref|XP_004147606.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g22760-like [Cucumis sativus]
gi|449529850|ref|XP_004171911.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g22760-like [Cucumis sativus]
Length = 580
Score = 294 bits (753), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 197/635 (31%), Positives = 327/635 (51%), Gaps = 74/635 (11%)
Query: 32 YCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVA 91
+ ++ + V Q QIH+ I +GL + C + +S F
Sbjct: 9 FLNSSVHVKQATQIHAQILVNGLPN-----------LESCLVRQITRSQF---------T 48
Query: 92 CNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGV 151
C ++S Y++ R+ D C V + F+QN + EA+ + M+ LG+
Sbjct: 49 CARIVSRYLQ--RILHHSRNPDAFTWACAVRF------FSQNGQFMEAIAHYVQMQRLGL 100
Query: 152 IPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARS 211
P+ ++S + + + + +H V KL V + T L++ Y + A+
Sbjct: 101 HPSTFAVSSTLRACGRIMCKFRGWCIHAQVYKLGFCRCVYVQTALVDFYSKLGDMGFAQK 160
Query: 212 LFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEA 271
+FDEM E+N+VSWN +L+G+ K G + A++LF+ +P KD +SW +M+ G+ + A
Sbjct: 161 VFDEMTEKNVVSWNSILSGYVKIGNLVDAQKLFDEMPVKDAISWNSMLTGFSNSGNMDRA 220
Query: 272 LTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHF 331
+++ M + SA AM G
Sbjct: 221 CCLFQQM------------GEKSSASWNAMIGG--------------------------- 241
Query: 332 YAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ--KRDVYSWSA 389
Y CG + AR F++ + + LIAG+ + G + A +LF+ M+ ++++ S++A
Sbjct: 242 YVNCGDMKAARNLFDVMPNRNNVTRITLIAGYSKLGEVNSAYELFDKMEESEKELLSFNA 301
Query: 390 MISGYAQNEQPNMALELFHGMVDA--GVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLN 447
MI+ Y+QN PN ALELF+ M+ ++P+E+T SV A G L G W Y+
Sbjct: 302 MIACYSQNSMPNKALELFNLMLQPHVNIQPDEMTFASVISACTQLGNLSYGTWIESYMEK 361
Query: 448 NSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTL 507
I L+D+L+ A++D+YAK G+IN AFE+F ++ R + ++A+I G ++ A+ +
Sbjct: 362 LGIELDDHLATALVDLYAKSGNINRAFELFNGLKKR--DLVAYSAMIFGCGINSKAHEAI 419
Query: 508 KIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDL 567
+++ ++ + NI N +T+ G+L+ HAGLVD G F SMK + + P HYG MVDL
Sbjct: 420 RLFKEMLRVNICPNLVTYAGLLTAYNHAGLVDEGYLCFSSMKD-HGLAPLADHYGIMVDL 478
Query: 568 LGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSR 627
LGRAG+LE+A E+I SMP++ + +WG LL A ++H NVE+GE AA++ + L R
Sbjct: 479 LGRAGRLEEAYELIHSMPVQPNAGVWGALLHACKLHNNVELGEIAARNCSKLVTDTTGYR 538
Query: 628 VLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
LL+NIY+ RW+DA +RK M + ++ G S
Sbjct: 539 SLLANIYSSMERWDDAKRMRKAMGNKIFAKISGCS 573
Score = 162 bits (410), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 129/497 (25%), Positives = 226/497 (45%), Gaps = 77/497 (15%)
Query: 13 QKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCG 72
Q+ L S + A+ S LR C + +G IH+ ++K G ++Q +L++ Y+K G
Sbjct: 96 QRLGLHPSTF--AVSSTLRACGRIMCKFRGWCIHAQVYKLGFCRCVYVQTALVDFYSKLG 153
Query: 73 LISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQ 132
+ A+ +FD + + V+ N ++SGY++ L DA+++FD+ P+K +S+ SM+ GF+
Sbjct: 154 DMGFAQKVFDEMTEKNVVSWNSILSGYVKIGNLVDAQKLFDEMPVKDAISWNSMLTGFSN 213
Query: 133 NDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVII 192
+ A +F+ M E + AS W MI G+V
Sbjct: 214 SGNMDRACCLFQQM-------GEKSSAS-----------WNA----------MIGGYV-- 243
Query: 193 STNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERI--PSK 250
C + AR+LFD M RN V+ ++ G++K G V A ELF+++ K
Sbjct: 244 ---------NCGDMKAARNLFDVMPNRNNVTRITLIAGYSKLGEVNSAYELFDKMEESEK 294
Query: 251 DVVSWGTMIDGYLQVERLSEALTMYRAMLCD--GIAPNDVMIVDLISACGRAMAFGEGLQ 308
+++S+ MI Y Q ++AL ++ ML I P+++ +ISAC + G
Sbjct: 295 ELLSFNAMIACYSQNSMPNKALELFNLMLQPHVNIQPDEMTFASVISACTQLGNLSYGTW 354
Query: 309 IHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGM 368
I S + K G + D + ++ YA G IN A FE
Sbjct: 355 IESYMEKLGIELDDHLATALVDLYAKSGNINRA---FE---------------------- 389
Query: 369 IEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCA 428
LFN ++KRD+ ++SAMI G N + + A+ LF M+ + PN +T + A
Sbjct: 390 ------LFNGLKKRDLVAYSAMIFGCGINSKAHEAIRLFKEMLRVNICPNLVTYAGLLTA 443
Query: 429 IASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVS 488
+G + EG + ++ + + ++D+ + G + A+E+ H +
Sbjct: 444 YNHAGLVDEGYLCFSSMKDHGLAPLADHYGIMVDLLGRAGRLEEAYELI-HSMPVQPNAG 502
Query: 489 PWNAIICGLAMHGDANL 505
W A++ +H + L
Sbjct: 503 VWGALLHACKLHNNVEL 519
Score = 135 bits (340), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 98/420 (23%), Positives = 201/420 (47%), Gaps = 17/420 (4%)
Query: 251 DVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIH 310
D +W + + Q + EA+ Y M G+ P+ + + ACGR M G IH
Sbjct: 68 DAFTWACAVRFFSQNGQFMEAIAHYVQMQRLGLHPSTFAVSSTLRACGRIMCKFRGWCIH 127
Query: 311 SIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIE 370
+ + K GF ++Q ++ FY+ G + A+ F+ + ++ SWN++++G+++ G +
Sbjct: 128 AQVYKLGFCRCVYVQTALVDFYSKLGDMGFAQKVFDEMTEKNVVSWNSILSGYVKIGNLV 187
Query: 371 DARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIA 430
DA++LF+ M +D SW++M++G++ + + A LF M + + + ++
Sbjct: 188 DAQKLFDEMPVKDAISWNSMLTGFSNSGNMDRACCLFQQMGE----KSSASWNAMIGGYV 243
Query: 431 SSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPW 490
+ G +K R + + N N+ +I Y+K G +N+A+E+F + + + +
Sbjct: 244 NCGDMKAARNLFDVMPNR----NNVTRITLIAGYSKLGEVNSAYELFDKMEESEKELLSF 299
Query: 491 NAIICGLAMHGDANLTLKIYSDLEKR--NIKLNSITFIGVLSTCCHAGLVDLGERYFKSM 548
NA+I + + N L++++ + + NI+ + +TF V+S C G + G + +S
Sbjct: 300 NAMIACYSQNSMPNKALELFNLMLQPHVNIQPDEMTFASVISACTQLGNLSYGT-WIESY 358
Query: 549 KSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEV 608
+E D +VDL ++G + A E+ + K D+V + ++ I+
Sbjct: 359 MEKLGIELDDHLATALVDLYAKSGNINRAFELFNGLK-KRDLVAYSAMIFGCGINSKAHE 417
Query: 609 GERAAKSLAGLQPSHGPSRVLLSNI---YADAGRWEDAFSIRKEMRDCGMKRLPGFSGVV 665
R K + L+ + P+ V + + Y AG ++ + M+D G+ L G++
Sbjct: 418 AIRLFKEM--LRVNICPNLVTYAGLLTAYNHAGLVDEGYLCFSSMKDHGLAPLADHYGIM 475
>gi|15240085|ref|NP_196272.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170345|sp|Q9FG16.1|PP367_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g06540
gi|10178110|dbj|BAB11403.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332003649|gb|AED91032.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 622
Score = 294 bits (753), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 163/428 (38%), Positives = 253/428 (59%), Gaps = 4/428 (0%)
Query: 236 LVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLIS 295
L+ A +F +I + ++ + +I + S+A Y ML I P+++ LI
Sbjct: 66 LLGYAYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIK 125
Query: 296 ACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLA-RLQFELGIKDHIA 354
A G Q HS IV+ GF +++ +++H YA CG I A R+ ++G +D +
Sbjct: 126 ASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRD-VV 184
Query: 355 SWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAG 414
SW +++AG+ + GM+E+AR++F+ M R++++WS MI+GYA+N A++LF M G
Sbjct: 185 SWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREG 244
Query: 415 VKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAF 474
V NE MVSV + A G L+ G A+EYV+ + +T+N L A++DM+ +CG I A
Sbjct: 245 VVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAI 304
Query: 475 EVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCH 534
VF + + T S+S W++II GLA+HG A+ + +S + +TF VLS C H
Sbjct: 305 HVFEGLPE-TDSLS-WSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSH 362
Query: 535 AGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWG 594
GLV+ G +++MK + +EP L+HYGC+VD+LGRAG+L +AE I M +K + I G
Sbjct: 363 GGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILG 422
Query: 595 TLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCG 654
LL A +I+ N EV ER L ++P H VLLSNIYA AG+W+ S+R M++
Sbjct: 423 ALLGACKIYKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKL 482
Query: 655 MKRLPGFS 662
+K+ PG+S
Sbjct: 483 VKKPPGWS 490
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 141/274 (51%), Gaps = 31/274 (11%)
Query: 42 GQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIR 101
G+Q HS I + G +++ +++NSL+++YA CG I+ A +F D V+ M++GY +
Sbjct: 136 GEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCK 195
Query: 102 NDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASV 161
+ +ARE+FD+ P + +++ MI G+A+N+C+ +A+++F M+ GV+ NE + SV
Sbjct: 196 CGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSV 255
Query: 162 ISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNI 221
ISS HLG + + V+K + +I+ T L++M+ C + +A +F+ + E +
Sbjct: 256 ISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDS 315
Query: 222 VSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCD 281
+SW+ ++ G A G +A+ + M+
Sbjct: 316 LSWSSIIKGLAVHG-------------------------------HAHKAMHYFSQMISL 344
Query: 282 GIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVK 315
G P DV ++SAC +GL+I+ + K
Sbjct: 345 GFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKK 378
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 103/448 (22%), Positives = 195/448 (43%), Gaps = 59/448 (13%)
Query: 27 VSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCST 86
++ L+ CS+ S + IH + ++ L S+ F+ + L+ L S F+ +
Sbjct: 16 LALLQSCSS---FSDLKIIHGFLLRTHLISDVFVASRLLALCVD-------DSTFNKPTN 65
Query: 87 LDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDM 146
L L A +F + + +I F+ +A + M
Sbjct: 66 L-----------------LGYAYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQM 108
Query: 147 RILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSL 206
+ P+ +T +I +S + + H +++ V + +L++MY C +
Sbjct: 109 LKSRIWPDNITFPFLIKASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFI 168
Query: 207 VEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVE 266
A +F +M R++VSW M+ G+ K G+VE ARE+F+ +P +++ +W MI+GY +
Sbjct: 169 AAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNN 228
Query: 267 RLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQA 326
+A+ ++ M +G+ N+ ++V +IS+C A G + + +VK+
Sbjct: 229 CFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMT------- 281
Query: 327 TIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYS 386
+NL LG AL+ F R G IE A +F + + D S
Sbjct: 282 -----------VNLI-----LG--------TALVDMFWRCGDIEKAIHVFEGLPETDSLS 317
Query: 387 WSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYV- 445
WS++I G A + + A+ F M+ G P ++T +V A + G +++G +E +
Sbjct: 318 WSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMK 377
Query: 446 LNNSITLNDNLSAAIIDMYAKCGSINTA 473
++ I I+DM + G + A
Sbjct: 378 KDHGIEPRLEHYGCIVDMLGRAGKLAEA 405
>gi|297738034|emb|CBI27235.3| unnamed protein product [Vitis vinifera]
Length = 696
Score = 294 bits (753), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 178/558 (31%), Positives = 282/558 (50%), Gaps = 54/558 (9%)
Query: 115 TPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWEC 174
+P + S+ + +++ +REA+ + +M + G P+ +V+ + L +
Sbjct: 52 SPSRSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTG 111
Query: 175 RMLHGLVIKLMI-DGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAK 233
+H +K V ++ L+NMY C + + + N ++ +AK
Sbjct: 112 EQIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGD-----------KTFTNNALMAMYAK 160
Query: 234 AGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDL 293
G V+ ++ LFE +D+VSW TMI + Q +R SEAL +R M+ +G+ + V I +
Sbjct: 161 LGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASV 220
Query: 294 ISACGRAMAFGEGLQIHSIIVKAGFDCYD--FIQATIIHFYAACGRINLARLQFELGIKD 351
+ AC G +IH+ +++ D + F+ + ++ Y C ++ R F+ +
Sbjct: 221 LPACSHLERLDVGKEIHAYVLRNN-DLIENSFVGSALVDMYCNCRQVESGRRVFDHILGR 279
Query: 352 HIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMV 411
I WNA+I+G+ RNG+ E A LF M K
Sbjct: 280 RIELWNAMISGYARNGLDEKALILFIEMIKV----------------------------- 310
Query: 412 DAGVKPNEITMVSVFCA-IASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSI 470
AG+ PN TM SV A + S + +G+ H Y + N + + + +A++DMYAKCG +
Sbjct: 311 -AGLLPNTTTMASVMPACVHSLAAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCL 369
Query: 471 NTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKR-----NIKLNSITF 525
N + VF + ++ +V WN +I MHG L+++ ++ K N +TF
Sbjct: 370 NLSRRVFNEMPNK--NVITWNVLIMACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTF 427
Query: 526 IGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMP 585
I V + C H+GL+ G F MK + VEP HY C+VDLLGRAGQLE+A E++ +MP
Sbjct: 428 ITVFAACSHSGLISEGLNLFYRMKHDHGVEPTSDHYACVVDLLGRAGQLEEAYELVNTMP 487
Query: 586 MKADVV-IWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAF 644
+ D V W +LL A RIH NVE+GE AAK+L L+P+ VLLSNIY+ AG W A
Sbjct: 488 AEFDKVGAWSSLLGACRIHQNVELGEVAAKNLLHLEPNVASHYVLLSNIYSSAGLWNKAM 547
Query: 645 SIRKEMRDCGMKRLPGFS 662
+RK MR G+K+ PG S
Sbjct: 548 EVRKNMRQMGVKKEPGCS 565
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 127/496 (25%), Positives = 228/496 (45%), Gaps = 91/496 (18%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTF-IQNSLINLYAKCGLISQAKSMFD 82
A + L+ S + G+QIH+ K G S++ + N+L+N+Y KCG I K+ +
Sbjct: 93 FAFPAVLKAVSGLQDLKTGEQIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGD-KTFTN 151
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
N +++ Y + R++D++ +F+ + VS+ +MI F+Q+D + EAL
Sbjct: 152 ----------NALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAF 201
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIK---LMIDGFVIISTNLLNM 199
FR M + GV + VT+ASV+ + HL + + +H V++ L+ + FV + L++M
Sbjct: 202 FRLMVLEGVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFV--GSALVDM 259
Query: 200 YCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMI 259
YC C + R +FD + R I WN M++G+A+ GL E A LF
Sbjct: 260 YCNCRQVESGRRVFDHILGRRIELWNAMISGYARNGLDEKALILF--------------- 304
Query: 260 DGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAM-AFGEGLQIHSIIVKAGF 318
+E + A G+ PN + ++ AC ++ A +G +IH+ ++
Sbjct: 305 -----IEMIKVA----------GLLPNTTTMASVMPACVHSLAAIAKGKEIHAYAIRNML 349
Query: 319 DCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNN 378
+ + ++ YA CG +NL+R F ++ +WN LI +G E+A +LF N
Sbjct: 350 ASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEALELFKN 409
Query: 379 MQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAG----VKPNEITMVSVFCAIASSGT 434
M + +AG KPNE+T ++VF A + SG
Sbjct: 410 M------------------------------VAEAGRGGEAKPNEVTFITVFAACSHSGL 439
Query: 435 LKEG-----RWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSP 489
+ EG R H++ + + A ++D+ + G + A+E+ + V
Sbjct: 440 ISEGLNLFYRMKHDH----GVEPTSDHYACVVDLLGRAGQLEEAYELVNTMPAEFDKVGA 495
Query: 490 WNAIICGLAMHGDANL 505
W++++ +H + L
Sbjct: 496 WSSLLGACRIHQNVEL 511
>gi|359473281|ref|XP_003631282.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Vitis vinifera]
Length = 615
Score = 294 bits (753), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 160/480 (33%), Positives = 269/480 (56%), Gaps = 10/480 (2%)
Query: 191 IISTNLLNMYCVCSSLVEARSLFDEM------KERNIVSWNVMLNGFAKAGLVELARELF 244
I+ ++M C++L E + + ++ + +V V + + ++
Sbjct: 7 IVKHPTISMVEPCTTLRELKQIHTQLLINGLLNDPQLVGQFVASIALNNPNNLHYSNQVL 66
Query: 245 ERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDG--IAPNDVMIVDLISACGRAMA 302
+ + + ++ +MI + + + Y +L +AP++ L+ + +A
Sbjct: 67 DNSQNPTLFTFNSMIRAHSKSSTPHRSFHFYSRILHSAGYLAPDNYTFTFLVRTSAQLLA 126
Query: 303 FGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAG 362
G G +H VK GF+ +Q+ +I+ YA G ++ F + + A+++
Sbjct: 127 HGTGSSVHGAAVKYGFEYDPHVQSGLIYMYAELGGLDACHRVFSSICEPDLVCQTAMVSA 186
Query: 363 FIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITM 422
+ G + AR+LF+ M +D +W+AMISGY Q Q AL LF+ M GVK NE++M
Sbjct: 187 CAKMGDVGFARKLFDKMSHKDPIAWNAMISGYVQCGQSREALSLFNLMQREGVKVNEVSM 246
Query: 423 VSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRD 482
VSV A + G L +GRWAH Y+ N + + L A+IDMYAKCG++N A EVF+ +++
Sbjct: 247 VSVLSACSHLGALDQGRWAHAYIERNKLRMTLTLGTALIDMYAKCGNMNKAMEVFWGMKE 306
Query: 483 RTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGE 542
+ +V W++ I GLAM+G L+++S +++ +++ N ITF+ VL C GLV+ G
Sbjct: 307 K--NVYTWSSAIGGLAMNGAGEKCLELFSLMKQDSVQPNEITFVSVLRGCSVVGLVEEGR 364
Query: 543 RYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRI 602
++F+SM VY +EP L+HYGCMVDL GRAG L++A I SMP++ V WG LL A +I
Sbjct: 365 KHFESMSKVYGIEPRLEHYGCMVDLYGRAGHLDEALNFINSMPVRPHVGAWGALLNACKI 424
Query: 603 HGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
+ N+E+GE A++ + L+ + + VLLSNIYAD+ W+ ++R+ M G+++ PG S
Sbjct: 425 YRNMEMGELASRKIVELEAKNHGAYVLLSNIYADSKDWDRVSNVRQTMNVKGVRKQPGCS 484
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 95/385 (24%), Positives = 168/385 (43%), Gaps = 47/385 (12%)
Query: 5 HFHSVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSL 64
HF+S L +Y + +R + +A G +H K G E + +Q+ L
Sbjct: 95 HFYSRILHSAGYLAPDNYTFTFL--VRTSAQLLAHGTGSSVHGAAVKYGFEYDPHVQSGL 152
Query: 65 INLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYT 124
I +YA+ G + +F S D V M+S + + AR++FDK K +++
Sbjct: 153 IYMYAELGGLDACHRVFSSICEPDLVCQTAMVSACAKMGDVGFARKLFDKMSHKDPIAWN 212
Query: 125 SMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKL 184
+MI G+ Q REAL +F M+ GV NEV++ SV+S+ HLG + + R H + +
Sbjct: 213 AMISGYVQCGQSREALSLFNLMQREGVKVNEVSMVSVLSACSHLGALDQGRWAHAYIERN 272
Query: 185 MIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELF 244
+ + + T L++MY C ++ +A +F MKE+N+ +W+ + G A G E ELF
Sbjct: 273 KLRMTLTLGTALIDMYAKCGNMNKAMEVFWGMKEKNVYTWSSAIGGLAMNGAGEKCLELF 332
Query: 245 ERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFG 304
M D + PN++ V ++ C
Sbjct: 333 S-------------------------------LMKQDSVQPNEITFVSVLRGCSVVGLVE 361
Query: 305 EGLQIHSIIVKA-GFDCYDFIQATIIHFYAACGRINLARLQF--ELGIKDHIASWNALIA 361
EG + + K G + ++ Y G ++ A L F + ++ H+ +W AL+
Sbjct: 362 EGRKHFESMSKVYGIEPRLEHYGCMVDLYGRAGHLDEA-LNFINSMPVRPHVGAWGALL- 419
Query: 362 GFIRNGMIEDARQLFNNMQKRDVYS 386
+A +++ NM+ ++ S
Sbjct: 420 ---------NACKIYRNMEMGELAS 435
>gi|224059226|ref|XP_002299777.1| predicted protein [Populus trichocarpa]
gi|222847035|gb|EEE84582.1| predicted protein [Populus trichocarpa]
Length = 439
Score = 294 bits (753), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 155/386 (40%), Positives = 231/386 (59%), Gaps = 7/386 (1%)
Query: 283 IAPNDVMIVDLISACGRAMAFGEGLQ--IHSIIVKAGFD-CYDFIQATIIHFYAACGRIN 339
I PN V + L+S C + G L +H+ K G D C + ++ YA CG +
Sbjct: 6 IDPNHVTFITLLSGCADLPSQGNSLGPLLHAYTRKLGLDTCNLMVGTALVDMYAKCGHVE 65
Query: 340 LARLQF-ELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNE 398
L+RL F EL +K+ SWN +I GF+RNG I +A ++F+ M +R V SW+ +I+G+ +
Sbjct: 66 LSRLCFDELKVKNSF-SWNTMIDGFVRNGKIREAIEVFDEMPERGVISWTVLINGFVKMG 124
Query: 399 QPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSA 458
ALE F M + V+P+ +T+V+V A A+ G L G W H Y L + N +
Sbjct: 125 LFEEALEWFRKMQVSKVEPDRVTIVTVLSACANLGALGLGLWVHRYALKKGLRDNVKICN 184
Query: 459 AIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNI 518
++ID+Y++CG+I A +VF + +RT + WN+II GLA +G L+ + ++K+
Sbjct: 185 SLIDLYSRCGAIELARQVFEKMGERT--LVSWNSIIGGLAANGFTEEALEHFDLMQKQGF 242
Query: 519 KLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAE 578
K N ++F G L+ C H GLVD G +YF M+ V+ + P ++HYGC+VDL RAG+LEDA
Sbjct: 243 KPNDVSFTGALTACSHTGLVDEGLKYFDIMERVHKISPRIEHYGCIVDLYSRAGRLEDAM 302
Query: 579 EVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAG 638
V+++MPMK + V+ G+LLAA R G+VE+ ER L L P + VLLSNIYA G
Sbjct: 303 SVVQNMPMKPNEVVVGSLLAACRTRGDVELAERLMNYLVHLDPGADSNYVLLSNIYAAVG 362
Query: 639 RWEDAFSIRKEMRDCGMKRLPGFSGV 664
RW+ A R M+ G+++ PGFS +
Sbjct: 363 RWDGACKQRMTMKALGIQKKPGFSSI 388
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 105/372 (28%), Positives = 178/372 (47%), Gaps = 36/372 (9%)
Query: 146 MRILGVIPNEVTLASVISSSVHLG--GIWECRMLHGLVIKLMIDGF-VIISTNLLNMYCV 202
MR+L + PN VT +++S L G +LH KL +D +++ T L++MY
Sbjct: 1 MRLLEIDPNHVTFITLLSGCADLPSQGNSLGPLLHAYTRKLGLDTCNLMVGTALVDMYAK 60
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
C + +R FDE+K +N SWN M++GF + G + A E+F+ +P + V+SW +I+G+
Sbjct: 61 CGHVELSRLCFDELKVKNSFSWNTMIDGFVRNGKIREAIEVFDEMPERGVISWTVLINGF 120
Query: 263 LQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD 322
+++ EAL +R M + P+ V IV ++SAC A G GL +H +K G
Sbjct: 121 VKMGLFEEALEWFRKMQVSKVEPDRVTIVTVLSACANLGALGLGLWVHRYALKKGLRDNV 180
Query: 323 FIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKR 382
I ++I Y+ CG I LAR FE + + SWN++I G NG E+A + F+ MQK+
Sbjct: 181 KICNSLIDLYSRCGAIELARQVFEKMGERTLVSWNSIIGGLAANGFTEEALEHFDLMQKQ 240
Query: 383 DVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAH 442
G KPN+++ A + +G + EG
Sbjct: 241 -------------------------------GFKPNDVSFTGALTACSHTGLVDEGLKYF 269
Query: 443 EYVLN-NSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHG 501
+ + + I+ I+D+Y++ G + A V ++ + V +++ G
Sbjct: 270 DIMERVHKISPRIEHYGCIVDLYSRAGRLEDAMSVVQNMPMKPNEVVV-GSLLAACRTRG 328
Query: 502 DANLTLKIYSDL 513
D L ++ + L
Sbjct: 329 DVELAERLMNYL 340
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 104/405 (25%), Positives = 183/405 (45%), Gaps = 73/405 (18%)
Query: 40 SQGQQIHSLIFKSGLES-NTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISG 98
S G +H+ K GL++ N + +L+++YAKCG + ++ FD + + N MI G
Sbjct: 29 SLGPLLHAYTRKLGLDTCNLMVGTALVDMYAKCGHVELSRLCFDELKVKNSFSWNTMIDG 88
Query: 99 YIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTL 158
++RN ++ +A EVFD+ P + +S+T +I GF + + EALE FR M++ V P+ VT+
Sbjct: 89 FVRNGKIREAIEVFDEMPERGVISWTVLINGFVKMGLFEEALEWFRKMQVSKVEPDRVTI 148
Query: 159 ASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKE 218
+V+S+ +LG + +H +K + V I +L+++Y C ++ AR +F++M E
Sbjct: 149 VTVLSACANLGALGLGLWVHRYALKKGLRDNVKICNSLIDLYSRCGAIELARQVFEKMGE 208
Query: 219 RNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAM 278
R +VSWN ++ G A G E EAL + M
Sbjct: 209 RTLVSWNSIIGGLAANGFTE-------------------------------EALEHFDLM 237
Query: 279 LCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRI 338
G PNDV ++AC H+ +V G +D ++ +H
Sbjct: 238 QKQGFKPNDVSFTGALTACS-----------HTGLVDEGLKYFDIMER--VH-------- 276
Query: 339 NLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ-KRDVYSWSAMISGYAQN 397
I I + ++ + R G +EDA + NM K + ++++
Sbjct: 277 ---------KISPRIEHYGCIVDLYSRAGRLEDAMSVVQNMPMKPNEVVVGSLLAACRTR 327
Query: 398 EQPNMALELFHGMV--DAGVKPNEITMVSVFCAIASSGTLKEGRW 440
+A L + +V D G N + + +++ A+ GRW
Sbjct: 328 GDVELAERLMNYLVHLDPGADSNYVLLSNIYAAV--------GRW 364
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 117/285 (41%), Gaps = 76/285 (26%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+ +V+ L C+ A+ G +H K GL N I NSLI+LY++CG I A
Sbjct: 146 VTIVTVLSACANLGALGLGLWVHRYALKKGLRDNVKICNSLIDLYSRCGAIELA------ 199
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
R+VF+K + VS+ S+I G A N EALE F
Sbjct: 200 -------------------------RQVFEKMGERTLVSWNSIIGGLAANGFTEEALEHF 234
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
M+ G PN+V+ +++ H G ++D
Sbjct: 235 DLMQKQGFKPNDVSFTGALTACSHTG---------------LVD---------------- 263
Query: 204 SSLVEARSLFDEMKERNIVS-----WNVMLNGFAKAGLVELARELFERIPSK-DVVSWGT 257
E FD M+ + +S + +++ +++AG +E A + + +P K + V G+
Sbjct: 264 ----EGLKYFDIMERVHKISPRIEHYGCIVDLYSRAGRLEDAMSVVQNMPMKPNEVVVGS 319
Query: 258 MIDGYL---QVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGR 299
++ VE L+E L Y L G N V++ ++ +A GR
Sbjct: 320 LLAACRTRGDVE-LAERLMNYLVHLDPGADSNYVLLSNIYAAVGR 363
>gi|242047142|ref|XP_002461317.1| hypothetical protein SORBIDRAFT_02g000820 [Sorghum bicolor]
gi|241924694|gb|EER97838.1| hypothetical protein SORBIDRAFT_02g000820 [Sorghum bicolor]
Length = 640
Score = 294 bits (753), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 164/440 (37%), Positives = 250/440 (56%), Gaps = 9/440 (2%)
Query: 231 FAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCD-GIAPNDVM 289
+A +G ++LA L R P V + + I + AL + ML G+ P
Sbjct: 72 YAASGRLDLAVALLRRTPDPTAVFYTSAIHAHSSRGLHHAALALLSEMLLSHGLLPTAHT 131
Query: 290 IVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFE-LG 348
+ + ACG +A G L H VK ++ ++ YA G AR+ F+ +
Sbjct: 132 LSASLPACG-GLAVGRAL--HGYAVKLALSGEPYVATALLGMYARAGDAAAARVLFDGMQ 188
Query: 349 IKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFH 408
H+ S A++ + + G+++DAR LF+ + +D+ W+AM+ GY Q+ +P+ AL LF
Sbjct: 189 PDPHVVSVTAMLTCYAKMGLLDDARSLFDGLPSKDLICWNAMMDGYTQHGRPSEALRLFR 248
Query: 409 GMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNS---ITLNDNLSAAIIDMYA 465
M+ +GV+P+E+++V A+A GT + GRW H +V N+S + LN + A+IDMY
Sbjct: 249 RMLRSGVEPDEVSVVLALSAVAQLGTAESGRWLHSFVTNSSSRRVRLNARVGTALIDMYY 308
Query: 466 KCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITF 525
KCGS+ A VF + + WNA++ G AMHG + L + L + + ITF
Sbjct: 309 KCGSLEDAVAVFGDLGAGDRDIVAWNAMVNGYAMHGHSREALAAFGQLRAQGLWPTDITF 368
Query: 526 IGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMP 585
IGVL+ C H+GLVD G F+SM Y +EP ++HYGCMVDLLGRAG++E+A E+++SM
Sbjct: 369 IGVLNACSHSGLVDEGRELFRSMAEEYGIEPKVEHYGCMVDLLGRAGRVEEAFELVQSMT 428
Query: 586 -MKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAF 644
K D V+W +LLAA R+H N+E+G+R A L ++ + VLLSN+YA AG W +
Sbjct: 429 RTKPDAVMWASLLAACRLHKNMELGQRIADHLVANGLANSGTYVLLSNMYAAAGNWREVG 488
Query: 645 SIRKEMRDCGMKRLPGFSGV 664
+R MR G+++ PG S V
Sbjct: 489 RVRAMMRASGIQKEPGCSAV 508
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 127/437 (29%), Positives = 208/437 (47%), Gaps = 45/437 (10%)
Query: 99 YIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL-GVIPNEVT 157
Y + RL+ A + +TP V YTS I + AL + +M + G++P T
Sbjct: 72 YAASGRLDLAVALLRRTPDPTAVFYTSAIHAHSSRGLHHAALALLSEMLLSHGLLPTAHT 131
Query: 158 LASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMK 217
L++ + + GG+ R LHG +KL + G ++T LL MY AR LFD M+
Sbjct: 132 LSASLPAC---GGLAVGRALHGYAVKLALSGEPYVATALLGMYARAGDAAAARVLFDGMQ 188
Query: 218 -ERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYR 276
+ ++VS ML +AK GL++ AR LF+ +PSKD++ W M+DGY Q R SEAL ++R
Sbjct: 189 PDPHVVSVTAMLTCYAKMGLLDDARSLFDGLPSKDLICWNAMMDGYTQHGRPSEALRLFR 248
Query: 277 AMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACG 336
ML G+ P++V +V +SA + G +HS + ++
Sbjct: 249 RMLRSGVEPDEVSVVLALSAVAQLGTAESGRWLHSFVTN-----------------SSSR 291
Query: 337 RINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQK--RDVYSWSAMISGY 394
R+ RL +G ALI + + G +EDA +F ++ RD+ +W+AM++GY
Sbjct: 292 RV---RLNARVG--------TALIDMYYKCGSLEDAVAVFGDLGAGDRDIVAWNAMVNGY 340
Query: 395 AQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGR-----WAHEYVLNNS 449
A + AL F + G+ P +IT + V A + SG + EGR A EY +
Sbjct: 341 AMHGHSREALAAFGQLRAQGLWPTDITFIGVLNACSHSGLVDEGRELFRSMAEEYGIEPK 400
Query: 450 ITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKI 509
+ ++D+ + G + AFE+ + W +++ +H + L +I
Sbjct: 401 V----EHYGCMVDLLGRAGRVEEAFELVQSMTRTKPDAVMWASLLAACRLHKNMELGQRI 456
Query: 510 YSDLEKRNIKLNSITFI 526
L + NS T++
Sbjct: 457 ADHLVANGLA-NSGTYV 472
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 144/305 (47%), Gaps = 54/305 (17%)
Query: 42 GQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP--VACNIMISGY 99
G+ +H K L ++ +L+ +YA+ G + A+ +FD DP V+ M++ Y
Sbjct: 145 GRALHGYAVKLALSGEPYVATALLGMYARAGDAAAARVLFDGMQP-DPHVVSVTAMLTCY 203
Query: 100 IRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLA 159
+ L+DAR +FD P K + + +M+ G+ Q+ EAL +FR M GV P+EV++
Sbjct: 204 AKMGLLDDARSLFDGLPSKDLICWNAMMDGYTQHGRPSEALRLFRRMLRSGVEPDEVSVV 263
Query: 160 SVISSSVHLGGIWECRMLHGLVI-----KLMIDGFVIISTNLLNMYCVCSSLVEARSLFD 214
+S+ LG R LH V ++ ++ V T L++MY C SL +A ++F
Sbjct: 264 LALSAVAQLGTAESGRWLHSFVTNSSSRRVRLNARV--GTALIDMYYKCGSLEDAVAVFG 321
Query: 215 EM--KERNIVSWNVMLNGFA-----------------------------------KAGLV 237
++ +R+IV+WN M+NG+A +GLV
Sbjct: 322 DLGAGDRDIVAWNAMVNGYAMHGHSREALAAFGQLRAQGLWPTDITFIGVLNACSHSGLV 381
Query: 238 ELARELFERIPSK-----DVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVD 292
+ RELF + + V +G M+D + R+ EA + ++M P+ VM
Sbjct: 382 DEGRELFRSMAEEYGIEPKVEHYGCMVDLLGRAGRVEEAFELVQSM--TRTKPDAVMWAS 439
Query: 293 LISAC 297
L++AC
Sbjct: 440 LLAAC 444
>gi|312190418|gb|ADQ43217.1| pentatricopeptide repeat [Eutrema parvulum]
Length = 616
Score = 294 bits (753), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 152/423 (35%), Positives = 235/423 (55%), Gaps = 3/423 (0%)
Query: 243 LFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMA 302
F D W MI G ++ +L +Y MLC N L+ AC A
Sbjct: 66 FFNGFDRPDTFLWNLMIRGLSCSDQPDRSLLLYHRMLCCSAPHNAYTFPFLLKACSNLSA 125
Query: 303 FGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAG 362
F E QIH+ I K G+ + ++I+ YA G A L F+ + SWN++I G
Sbjct: 126 FQETTQIHAHITKFGYGHDIYAVNSLINSYAVTGNFKHAHLLFDRIQEPDAVSWNSVIKG 185
Query: 363 FIRNGMIEDARQLFNNM-QKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEIT 421
+++ G ++ A LF M +K + SW+ MISGY Q AL+LFH M ++ V P+ ++
Sbjct: 186 YVKAGEMDMALTLFRKMPEKNNAISWTTMISGYVQAGMNKEALQLFHEMQNSNVPPDNVS 245
Query: 422 MVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIR 481
+ S A + G L++G+W H Y ++ L +IDMYAKCG + A VF +++
Sbjct: 246 LASALSACSQLGALEQGKWIHSYANKTRTRIDSVLCCVLIDMYAKCGEMEEALGVFKNMK 305
Query: 482 DRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLG 541
T SV W A+I G A HG + + +++ +K N+ITF VL+ C + GLV+ G
Sbjct: 306 --TKSVQVWTALISGYAYHGLGREAISKFLEMQNMGVKPNAITFTAVLTACSYTGLVEEG 363
Query: 542 ERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASR 601
+ F +++ YN++P ++HYGCMVDLLGRAG L +A I+ MP+K + VIWG+LL A +
Sbjct: 364 KSVFNTIERDYNLKPTIEHYGCMVDLLGRAGLLNEANRFIQKMPLKPNAVIWGSLLKACQ 423
Query: 602 IHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGF 661
IH N+E+GE+ + L + +HG V ++NI+A +W+ A R+ MR+ G+ ++PG
Sbjct: 424 IHKNIELGEKIGEILIEMDSNHGGRYVHMANIHAMGKKWDKAAETRRLMREQGVVKVPGC 483
Query: 662 SGV 664
S +
Sbjct: 484 SAI 486
Score = 138 bits (348), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 117/490 (23%), Positives = 202/490 (41%), Gaps = 77/490 (15%)
Query: 27 VSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCST 86
+S L+ C + + +QIH+ + KSGL + + ++ S A +F
Sbjct: 15 LSCLQKCPTEVEL---KQIHARMLKSGLLQDPYAMTKFLSFCLSSSFSSYAHDVF----- 66
Query: 87 LDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDM 146
+G+ R D + MI G + +D +L ++ M
Sbjct: 67 ---------FNGFDRPDTF----------------LWNLMIRGLSCSDQPDRSLLLYHRM 101
Query: 147 RILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSL 206
N T ++ + +L E +H + K + +L+N Y V +
Sbjct: 102 LCCSAPHNAYTFPFLLKACSNLSAFQETTQIHAHITKFGYGHDIYAVNSLINSYAVTGNF 161
Query: 207 VEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSK-DVVSWGTMIDGYLQV 265
A LFD ++E + VSWN ++ G+ KAG +++A LF ++P K + +SW TMI GY+Q
Sbjct: 162 KHAHLLFDRIQEPDAVSWNSVIKGYVKAGEMDMALTLFRKMPEKNNAISWTTMISGYVQA 221
Query: 266 ERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQ 325
EAL ++ M + P++V + +SAC + A +G IHS K +
Sbjct: 222 GMNKEALQLFHEMQNSNVPPDNVSLASALSACSQLGALEQGKWIHSYANKTRTRIDSVLC 281
Query: 326 ATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVY 385
+I YA CG + A F+ + W ALI+G+ +G+ +A F MQ
Sbjct: 282 CVLIDMYAKCGEMEEALGVFKNMKTKSVQVWTALISGYAYHGLGREAISKFLEMQ----- 336
Query: 386 SWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYV 445
+ GVKPN IT +V A + +G ++EG+
Sbjct: 337 --------------------------NMGVKPNAITFTAVLTACSYTGLVEEGK-----S 365
Query: 446 LNNSITLNDNLSAAI------IDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAM 499
+ N+I + NL I +D+ + G +N A + + +V W +++ +
Sbjct: 366 VFNTIERDYNLKPTIEHYGCMVDLLGRAGLLNEANRFIQKMPLKPNAVI-WGSLLKACQI 424
Query: 500 HGDANLTLKI 509
H + L KI
Sbjct: 425 HKNIELGEKI 434
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 108/253 (42%), Gaps = 77/253 (30%)
Query: 17 LQNSDY---ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGL 73
+QNS+ ++L SAL CS A+ QG+ IHS K+ ++ + LI++YAKCG
Sbjct: 234 MQNSNVPPDNVSLASALSACSQLGALEQGKWIHSYANKTRTRIDSVLCCVLIDMYAKCGE 293
Query: 74 ISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQN 133
+ +A +F + T K +T++I G+A +
Sbjct: 294 MEEALGVFKNMKT-------------------------------KSVQVWTALISGYAYH 322
Query: 134 DCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIIS 193
REA+ F +M+ +GV PN +T +V+++
Sbjct: 323 GLGREAISKFLEMQNMGVKPNAITFTAVLTA----------------------------- 353
Query: 194 TNLLNMYCVCSSLV-EARSLFDEMK-----ERNIVSWNVMLNGFAKAGLVELARELFERI 247
C + LV E +S+F+ ++ + I + M++ +AGL+ A +++
Sbjct: 354 -------CSYTGLVEEGKSVFNTIERDYNLKPTIEHYGCMVDLLGRAGLLNEANRFIQKM 406
Query: 248 PSK-DVVSWGTMI 259
P K + V WG+++
Sbjct: 407 PLKPNAVIWGSLL 419
>gi|357511423|ref|XP_003626000.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355501015|gb|AES82218.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 607
Score = 294 bits (753), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 174/501 (34%), Positives = 272/501 (54%), Gaps = 42/501 (8%)
Query: 196 LLNMYCVCSSLVEARSLFDE-MKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVS 254
++N Y +++ +A L DE + NIVSWN+++ + + + +LF+++P KD VS
Sbjct: 14 MINTYIDNNNVKQAHKLLDENLLSCNIVSWNMVMTAYLQHNQIGPVHDLFDKMPLKDAVS 73
Query: 255 WGTMIDGYLQVERLSEALTMYRAMLC---DGIAPNDVMIVDLISACGRAMAFGEGLQIHS 311
W M+ G+ Q R SE L YR L G+ PND I L+ A Q+H+
Sbjct: 74 WNIMLSGF-QRTRNSEGL--YRCFLQMGRAGVVPNDYTISTLLRAVISTELDVLVRQVHA 130
Query: 312 IIVKAGFDCYDFIQATIIHFYAAC-------------------------------GRINL 340
+ G F+ +++I YA G+
Sbjct: 131 LAFHLGHYLNVFVGSSLIRAYAGLKEEEALGRAFNDISMKDVTSWNALVSSYMELGKFVD 190
Query: 341 ARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQP 400
A+ F+ + +I SW L+ G+++N + AR +F++M +R+V SW+AMISGY QN++
Sbjct: 191 AQTAFDQMPQRNIISWTTLVNGYVKNKQVNKARSVFDDMSERNVVSWTAMISGYVQNKRF 250
Query: 401 NMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAI 460
AL+LF M +PN T SV A A S +L G H ++ + I + ++
Sbjct: 251 VDALKLFVLMFKTETRPNHFTFSSVLDACAGSSSLIMGLQLHPCIIKSGIANDVIWLTSL 310
Query: 461 IDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKL 520
+DMYAKCG ++ AF VF IRD+ ++ WNAII G A HG A L+ + ++
Sbjct: 311 VDMYAKCGDMDAAFGVFESIRDK--NLVSWNAIIGGYASHGLATRALEEFDRMKVVGTP- 367
Query: 521 NSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEV 580
+ +TF+ VLS C HAGLV+ GE++F M + Y ++ +++HY CMVDL GRAG+ ++AE +
Sbjct: 368 DEVTFVNVLSACVHAGLVEEGEKHFTDMLTKYGIQAEMEHYSCMVDLYGRAGRFDEAENL 427
Query: 581 IRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRW 640
I++MP + DVV+WG LLAA +H N+E+GE AA+ + L+ SH S +LS I + G W
Sbjct: 428 IKNMPFEPDVVLWGALLAACGLHSNLELGEYAAERIRRLESSHPVSYSVLSKIQGEKGVW 487
Query: 641 EDAFSIRKEMRDCGMKR-LPG 660
+R M++ G+K+ PG
Sbjct: 488 SSVNELRDTMKERGIKKQTPG 508
Score = 162 bits (409), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 125/505 (24%), Positives = 226/505 (44%), Gaps = 74/505 (14%)
Query: 62 NSLINLYAKCGLISQAKSMFD----SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPI 117
N +IN Y + QA + D SC+ V+ N++++ Y++++++ ++FDK P+
Sbjct: 12 NYMINTYIDNNNVKQAHKLLDENLLSCNI---VSWNMVMTAYLQHNQIGPVHDLFDKMPL 68
Query: 118 KCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRML 177
K VS+ M+ GF + F M GV+PN+ T+++++ + + R +
Sbjct: 69 KDAVSWNIMLSGFQRTRNSEGLYRCFLQMGRAGVVPNDYTISTLLRAVISTELDVLVRQV 128
Query: 178 HGLVIKL--MIDGFV----------------------------IISTN-LLNMYCVCSSL 206
H L L ++ FV + S N L++ Y
Sbjct: 129 HALAFHLGHYLNVFVGSSLIRAYAGLKEEEALGRAFNDISMKDVTSWNALVSSYMELGKF 188
Query: 207 VEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVE 266
V+A++ FD+M +RNI+SW ++NG+ K V AR +F+ + ++VVSW MI GY+Q +
Sbjct: 189 VDAQTAFDQMPQRNIISWTTLVNGYVKNKQVNKARSVFDDMSERNVVSWTAMISGYVQNK 248
Query: 267 RLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQA 326
R +AL ++ M PN ++ AC + + GLQ+H I+K+G
Sbjct: 249 RFVDALKLFVLMFKTETRPNHFTFSSVLDACAGSSSLIMGLQLHPCIIKSGIANDVIWLT 308
Query: 327 TIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYS 386
+++ YA CG ++ A FE ++ SWNA+I G+ +G+ A + F+ M+
Sbjct: 309 SLVDMYAKCGDMDAAFGVFESIRDKNLVSWNAIIGGYASHGLATRALEEFDRMK------ 362
Query: 387 WSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVL 446
+ G P+E+T V+V A +G ++EG +L
Sbjct: 363 ----VVG----------------------TPDEVTFVNVLSACVHAGLVEEGEKHFTDML 396
Query: 447 NN-SITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANL 505
I + ++D+Y + G + A + ++ V W A++ +H +NL
Sbjct: 397 TKYGIQAEMEHYSCMVDLYGRAGRFDEAENLIKNM-PFEPDVVLWGALLAACGLH--SNL 453
Query: 506 TLKIYSDLEKRNIKLNSITFIGVLS 530
L Y+ R ++ + VLS
Sbjct: 454 ELGEYAAERIRRLESSHPVSYSVLS 478
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 97/359 (27%), Positives = 159/359 (44%), Gaps = 77/359 (21%)
Query: 43 QQIHSLIFKSGLESNTFIQNSLINLYA-------------------------------KC 71
+Q+H+L F G N F+ +SLI YA +
Sbjct: 126 RQVHALAFHLGHYLNVFVGSSLIRAYAGLKEEEALGRAFNDISMKDVTSWNALVSSYMEL 185
Query: 72 GLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFA 131
G A++ FD + ++ +++GY++N ++N AR VFD + VS+T+MI G+
Sbjct: 186 GKFVDAQTAFDQMPQRNIISWTTLVNGYVKNKQVNKARSVFDDMSERNVVSWTAMISGYV 245
Query: 132 QNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVI 191
QN + +AL++F M PN T +SV+ + + LH +IK I VI
Sbjct: 246 QNKRFVDALKLFVLMFKTETRPNHFTFSSVLDACAGSSSLIMGLQLHPCIIKSGIANDVI 305
Query: 192 ISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKD 251
T+L++MY C + A +F+ ++++N+VSWN ++ G+A GL A E F+R+
Sbjct: 306 WLTSLVDMYAKCGDMDAAFGVFESIRDKNLVSWNAIIGGYASHGLATRALEEFDRM---K 362
Query: 252 VVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQ-IH 310
VV GT P++V V+++SAC A EG +
Sbjct: 363 VV--GT---------------------------PDEVTFVNVLSACVHAGLVEEGEKHFT 393
Query: 311 SIIVKAGFDCYDFIQATIIHF------YAACGRINLAR-LQFELGIKDHIASWNALIAG 362
++ K G IQA + H+ Y GR + A L + + + W AL+A
Sbjct: 394 DMLTKYG------IQAEMEHYSCMVDLYGRAGRFDEAENLIKNMPFEPDVVLWGALLAA 446
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 103/236 (43%), Gaps = 37/236 (15%)
Query: 28 SALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTL 87
S L C+ ++ G Q+H I KSG+ ++ SL+++YAKCG + A +F+S
Sbjct: 274 SVLDACAGSSSLIMGLQLHPCIIKSGIANDVIWLTSLVDMYAKCGDMDAAFGVFESIRDK 333
Query: 88 DPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMR 147
+ V+ N +I GY A + ALE F M+
Sbjct: 334 NLVSWNAIIGGY-------------------------------ASHGLATRALEEFDRMK 362
Query: 148 ILGVIPNEVTLASVISSSVHLGGIWEC-RMLHGLVIKLMIDGFVIISTNLLNMYCVCSSL 206
++G P+EVT +V+S+ VH G + E + ++ K I + + ++++Y
Sbjct: 363 VVGT-PDEVTFVNVLSACVHAGLVEEGEKHFTDMLTKYGIQAEMEHYSCMVDLYGRAGRF 421
Query: 207 VEARSLFDEMK-ERNIVSWNVMLNG---FAKAGLVELARELFERIPSKDVVSWGTM 258
EA +L M E ++V W +L + L E A E R+ S VS+ +
Sbjct: 422 DEAENLIKNMPFEPDVVLWGALLAACGLHSNLELGEYAAERIRRLESSHPVSYSVL 477
>gi|2583119|gb|AAB82628.1| hypothetical protein [Arabidopsis thaliana]
Length = 606
Score = 294 bits (753), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 179/521 (34%), Positives = 282/521 (54%), Gaps = 49/521 (9%)
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
GV ++ +L+ V+ + LG + +HG + K + + + L+ +Y C L +
Sbjct: 109 GVSVDKFSLSLVLKACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLS 168
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPS--KDVVSWGTMIDGYLQVER 267
R +FD M +R+ VS+N M++G+ K GL+ ARELF+ +P K+++SW +MI GY Q
Sbjct: 169 RQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQT-- 226
Query: 268 LSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQAT 327
S+ + + + D P DLIS +
Sbjct: 227 -SDGVDIASKLFAD--MPEK----DLIS-----------------------------WNS 250
Query: 328 IIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSW 387
+I Y GRI A+ F++ + + +W +I G+ + G + A+ LF+ M RDV ++
Sbjct: 251 MIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAY 310
Query: 388 SAMISGYAQNEQPNMALELFHGM-VDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVL 446
++M++GY QN+ ALE+F M ++ + P++ T+V V AIA G L + H Y++
Sbjct: 311 NSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIV 370
Query: 447 NNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLT 506
L L A+IDMY+KCGSI A VF I ++ S+ WNA+I GLA+HG
Sbjct: 371 EKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENK--SIDHWNAMIGGLAIHGLGESA 428
Query: 507 LKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVD 566
+ +E+ ++K + ITF+GVL+ C H+GLV G F+ M+ + +EP L+HYGCMVD
Sbjct: 429 FDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVD 488
Query: 567 LLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSL---AGLQPSH 623
+L R+G +E A+ +I MP++ + VIW T L A H E GE AK L AG PS
Sbjct: 489 ILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFETGELVAKHLILQAGYNPS- 547
Query: 624 GPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
S VLLSN+YA G W+D +R M++ ++++PG S +
Sbjct: 548 --SYVLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWI 586
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 137/458 (29%), Positives = 220/458 (48%), Gaps = 79/458 (17%)
Query: 22 YELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMF 81
+ L+LV L+ CS V G QIH + K+GL S+ F+QN LI LY KCG + ++ MF
Sbjct: 115 FSLSLV--LKACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMF 172
Query: 82 DSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTP--IKCCVSYTSMIMGFAQ-NDCWRE 138
D D V+ N MI GY++ + ARE+FD P +K +S+ SMI G+AQ +D
Sbjct: 173 DRMPKRDSVSYNSMIDGYVKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQTSDGVDI 232
Query: 139 ALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLN 198
A ++F DM P + ++ W MIDG+V
Sbjct: 233 ASKLFADM------PEKDLIS------------WNS----------MIDGYV-------- 256
Query: 199 MYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTM 258
+ +A+ LFD M R++V+W M++G+AK G V A+ LF+++P +DVV++ +M
Sbjct: 257 ---KHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSM 313
Query: 259 IDGYLQVERLSEALTMYRAMLCDG-IAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAG 317
+ GY+Q + EAL ++ M + + P+D +V ++ A + + + +H IV+
Sbjct: 314 MAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQ 373
Query: 318 FDCYDFIQATIIHFYAACGRINLARLQFELGIKDH-IASWNALIAGFIRNGMIEDARQLF 376
F + +I Y+ CG I A L FE GI++ I WNA+I G +G+ E A +
Sbjct: 374 FYLGGKLGVALIDMYSKCGSIQHAMLVFE-GIENKSIDHWNAMIGGLAIHGLGESAFDML 432
Query: 377 NNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLK 436
+++ +KP++IT V V A + SG +K
Sbjct: 433 LQIER-------------------------------LSLKPDDITFVGVLNACSHSGLVK 461
Query: 437 EGRWAHEYV-LNNSITLNDNLSAAIIDMYAKCGSINTA 473
EG E + + I ++D+ ++ GSI A
Sbjct: 462 EGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELA 499
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 102/373 (27%), Positives = 180/373 (48%), Gaps = 31/373 (8%)
Query: 250 KDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQI 309
+D W +I + + +AL + ML +G++ + + ++ AC R G+QI
Sbjct: 77 EDPFLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFVKGGMQI 136
Query: 310 HSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMI 369
H + K G F+Q +I Y CG + L+R F+ K S+N++I G+++ G+I
Sbjct: 137 HGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLI 196
Query: 370 EDARQLFN--NMQKRDVYSWSAMISGYAQ-NEQPNMALELFHGMVDAGVKPNEITMVSVF 426
AR+LF+ M+ +++ SW++MISGYAQ ++ ++A +LF M E ++S
Sbjct: 197 VSARELFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFADM-------PEKDLISWN 249
Query: 427 CAIASSGTLKEGRWAHEYVLNNSITLNDNLS-AAIIDMYAKCGSINTAFEVFYHIRDRTT 485
I G +K GR L + + D ++ A +ID YAK G ++ A +F + R
Sbjct: 250 SMI--DGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHR-- 305
Query: 486 SVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKL-NSITFIGVLSTCCHAGLVDLGERY 544
V +N+++ G + L+I+SD+EK + L + T + VL G R
Sbjct: 306 DVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLG------RL 359
Query: 545 FKSMK-SVYNVEPDLKHYG----CMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAA 599
K++ +Y VE G ++D+ + G ++ A V + K+ + W ++
Sbjct: 360 SKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKS-IDHWNAMIGG 418
Query: 600 SRIHGNVEVGERA 612
IHG +GE A
Sbjct: 419 LAIHG---LGESA 428
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 133/291 (45%), Gaps = 31/291 (10%)
Query: 308 QIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNG 367
QIH ++K G + I+ +A+ R LA + + H+ S++ G
Sbjct: 23 QIHGRLIKTGIIKNSNLTTRIVLAFASSRRPYLADFARCVFHEYHVCSFSF--------G 74
Query: 368 MIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFC 427
+ED + W+A+I ++ + P AL L M++ GV ++ ++ V
Sbjct: 75 EVEDP------------FLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLK 122
Query: 428 AIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSV 487
A + G +K G H ++ + + L +I +Y KCG + + ++F + R SV
Sbjct: 123 ACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKR-DSV 181
Query: 488 SPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCH-AGLVDLGERYFK 546
S +N++I G G +++ DL +K N I++ ++S + VD+ + F
Sbjct: 182 S-YNSMIDGYVKCGLIVSARELF-DLMPMEMK-NLISWNSMISGYAQTSDGVDIASKLFA 238
Query: 547 SMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLL 597
M E DL + M+D + G++EDA+ + MP + DVV W T++
Sbjct: 239 DMP-----EKDLISWNSMIDGYVKHGRIEDAKGLFDVMP-RRDVVTWATMI 283
>gi|125579001|gb|EAZ20147.1| hypothetical protein OsJ_35746 [Oryza sativa Japonica Group]
Length = 601
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 187/640 (29%), Positives = 306/640 (47%), Gaps = 97/640 (15%)
Query: 25 ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSC 84
+LVS + C G IH+L K GL + + N+L+++Y K G + + +FD
Sbjct: 43 SLVSVVPACGTEQEEKFGLSIHALAVKVGLNTMVNLANALVDMYGKFGDVEASMQVFD-- 100
Query: 85 STLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFR 144
G + + VS+ S I F + + L +FR
Sbjct: 101 -------------GMLEQNE----------------VSWNSAIGCFLNAGFYGDVLRMFR 131
Query: 145 DMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCS 204
M V+P +TL+S++ + V LG R +HG IK +D + ++ +L++MY
Sbjct: 132 KMSEHNVMPGSITLSSLLPALVELGSFDLGREVHGYSIKRAMDLDIFVANSLVDMY---- 187
Query: 205 SLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQ 264
AK G +E A +FE++ ++VVSW MI +Q
Sbjct: 188 ---------------------------AKFGSLEKASTIFEQMKDRNVVSWNAMIANLVQ 220
Query: 265 VERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFI 324
+EA + M G PN + +V+++ AC R + G QIH+ ++ G FI
Sbjct: 221 NGAETEAFRLVTDMQKSGECPNSITLVNVLPACARMASLKMGKQIHAWSIRRGLMFDLFI 280
Query: 325 QATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDV 384
+I Y+ CG+++LA R +F +K DV
Sbjct: 281 SNALIDMYSKCGQLSLA-------------------------------RNIFERSEKDDV 309
Query: 385 YSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEY 444
S++ +I GY+Q+ +L LF M G+ + ++ + A + K G+ H
Sbjct: 310 -SYNTLILGYSQSPWCFESLLLFKQMRSVGIDYDAVSFMGALSACTNLSVFKHGKEIHCV 368
Query: 445 VLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDAN 504
++ ++ + LS +++D+Y K G + TA ++F I + V+ WN +I G MHG +
Sbjct: 369 LVRRLLSGHPFLSNSLLDLYTKGGMLVTASKIFNKITKK--DVASWNTMILGYGMHGQID 426
Query: 505 LTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCM 564
+ +++ ++ + + +++I VL+ C H GLVD G++YF M + N+EP HY CM
Sbjct: 427 IAFELFELMKGDGLDYDHVSYIAVLAACSHGGLVDKGKKYFSQMVA-QNIEPQQMHYACM 485
Query: 565 VDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHG 624
VDLLGRAGQL E+IR MP A+ +WG LL A RIHGN+E+ + AA+ L L+P H
Sbjct: 486 VDLLGRAGQLSKCAEIIRDMPFPANSDVWGALLGACRIHGNIELAQWAAEHLFELKPEHS 545
Query: 625 PSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
L+ N+YA+ GRW +A IRK M+ +++ P +S V
Sbjct: 546 GYYTLMINMYAETGRWNEANKIRKLMKSRKVQKNPAYSWV 585
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 117/497 (23%), Positives = 215/497 (43%), Gaps = 75/497 (15%)
Query: 116 PIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECR 175
P + VS+ S++ F N + +A M G N +L SV+ + G E +
Sbjct: 2 PERDVVSWNSLVSAFLVNGMFHDARRALVSMMRSGFPLNVASLVSVVPAC---GTEQEEK 58
Query: 176 M---LHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFA 232
+H L +K+ ++ V ++ L++MY
Sbjct: 59 FGLSIHALAVKVGLNTMVNLANALVDMY-------------------------------G 87
Query: 233 KAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVD 292
K G VE + ++F+ + ++ VSW + I +L + L M+R M + P + +
Sbjct: 88 KFGDVEASMQVFDGMLEQNEVSWNSAIGCFLNAGFYGDVLRMFRKMSEHNVMPGSITLSS 147
Query: 293 LISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDH 352
L+ A +F G ++H +K D F+ +++ YA G + A FE +
Sbjct: 148 LLPALVELGSFDLGREVHGYSIKRAMDLDIFVANSLVDMYAKFGSLEKASTIFEQMKDRN 207
Query: 353 IASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVD 412
+ SWNA+IA ++NG +A +L +MQK
Sbjct: 208 VVSWNAMIANLVQNGAETEAFRLVTDMQK------------------------------- 236
Query: 413 AGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINT 472
+G PN IT+V+V A A +LK G+ H + + + + +S A+IDMY+KCG ++
Sbjct: 237 SGECPNSITLVNVLPACARMASLKMGKQIHAWSIRRGLMFDLFISNALIDMYSKCGQLSL 296
Query: 473 AFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTC 532
A +F R VS +N +I G + +L ++ + I ++++F+G LS C
Sbjct: 297 ARNIFE--RSEKDDVS-YNTLILGYSQSPWCFESLLLFKQMRSVGIDYDAVSFMGALSAC 353
Query: 533 CHAGLVDLG-ERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVV 591
+ + G E + ++ + + P L + ++DL + G L A ++ + K DV
Sbjct: 354 TNLSVFKHGKEIHCVLVRRLLSGHPFLSN--SLLDLYTKGGMLVTASKIFNKIT-KKDVA 410
Query: 592 IWGTLLAASRIHGNVEV 608
W T++ +HG +++
Sbjct: 411 SWNTMILGYGMHGQIDI 427
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 90/351 (25%), Positives = 161/351 (45%), Gaps = 36/351 (10%)
Query: 247 IPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEG 306
+P +DVVSW +++ +L +A +M+ G N +V ++ ACG G
Sbjct: 1 MPERDVVSWNSLVSAFLVNGMFHDARRALVSMMRSGFPLNVASLVSVVPACGTEQEEKFG 60
Query: 307 LQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRN 366
L IH++ VK G + +NLA NAL+ + +
Sbjct: 61 LSIHALAVKVGLNTM----------------VNLA---------------NALVDMYGKF 89
Query: 367 GMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVF 426
G +E + Q+F+ M +++ SW++ I + L +F M + V P IT+ S+
Sbjct: 90 GDVEASMQVFDGMLEQNEVSWNSAIGCFLNAGFYGDVLRMFRKMSEHNVMPGSITLSSLL 149
Query: 427 CAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTS 486
A+ G+ GR H Y + ++ L+ ++ +++DMYAK GS+ A +F ++DR +
Sbjct: 150 PALVELGSFDLGREVHGYSIKRAMDLDIFVANSLVDMYAKFGSLEKASTIFEQMKDR--N 207
Query: 487 VSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFK 546
V WNA+I L +G ++ +D++K NSIT + VL C + +G++
Sbjct: 208 VVSWNAMIANLVQNGAETEAFRLVTDMQKSGECPNSITLVNVLPACARMASLKMGKQ-IH 266
Query: 547 SMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLL 597
+ + DL ++D+ + GQL A + + D V + TL+
Sbjct: 267 AWSIRRGLMFDLFISNALIDMYSKCGQLSLARNIFER--SEKDDVSYNTLI 315
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 89/377 (23%), Positives = 173/377 (45%), Gaps = 49/377 (12%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+ LV+ L C+ ++ G+QIH+ + GL + FI N+LI++Y+KCG +S A+++F+
Sbjct: 244 ITLVNVLPACARMASLKMGKQIHAWSIRRGLMFDLFISNALIDMYSKCGQLSLARNIFER 303
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
D VSY ++I+G++Q+ E+L +F
Sbjct: 304 SEKDD--------------------------------VSYNTLILGYSQSPWCFESLLLF 331
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
+ MR +G+ + V+ +S+ +L + +H ++++ ++ G +S +LL++Y
Sbjct: 332 KQMRSVGIDYDAVSFMGALSACTNLSVFKHGKEIHCVLVRRLLSGHPFLSNSLLDLYTKG 391
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSK----DVVSWGTMI 259
LV A +F+++ ++++ SWN M+ G+ G +++A ELFE + D VS+ ++
Sbjct: 392 GMLVTASKIFNKITKKDVASWNTMILGYGMHGQIDIAFELFELMKGDGLDYDHVSYIAVL 451
Query: 260 DGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFD 319
+ + + M+ I P + ++ GRA G+ + II F
Sbjct: 452 AACSHGGLVDKGKKYFSQMVAQNIEPQQMHYACMVDLLGRA---GQLSKCAEIIRDMPFP 508
Query: 320 CYDFIQATIIHFYAACGRINLARLQ----FELGIKDHIASWNALIAGFIRNGMIEDARQL 375
+ ++ G I LA+ FEL +H + +I + G +A ++
Sbjct: 509 ANSDVWGALLGACRIHGNIELAQWAAEHLFELK-PEHSGYYTLMINMYAETGRWNEANKI 567
Query: 376 FNNMQKRDV-----YSW 387
M+ R V YSW
Sbjct: 568 RKLMKSRKVQKNPAYSW 584
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 106/224 (47%), Gaps = 12/224 (5%)
Query: 379 MQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG 438
M +RDV SW++++S + N + A M+ +G N ++VSV A + K G
Sbjct: 1 MPERDVVSWNSLVSAFLVNGMFHDARRALVSMMRSGFPLNVASLVSVVPACGTEQEEKFG 60
Query: 439 RWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWN-AIICGL 497
H + + NL+ A++DMY K G + + +VF + ++ WN AI C L
Sbjct: 61 LSIHALAVKVGLNTMVNLANALVDMYGKFGDVEASMQVFDGMLEQNE--VSWNSAIGCFL 118
Query: 498 --AMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLG-ERYFKSMKSVYNV 554
+GD L+++ + + N+ SIT +L G DLG E + S+K ++
Sbjct: 119 NAGFYGD---VLRMFRKMSEHNVMPGSITLSSLLPALVELGSFDLGREVHGYSIKRAMDL 175
Query: 555 EPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLA 598
D+ +VD+ + G LE A + M + +VV W ++A
Sbjct: 176 --DIFVANSLVDMYAKFGSLEKASTIFEQMKDR-NVVSWNAMIA 216
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 76/159 (47%), Gaps = 5/159 (3%)
Query: 21 DYE-LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKS 79
DY+ ++ + AL C+ G++IH ++ + L + F+ NSL++LY K G++ A
Sbjct: 340 DYDAVSFMGALSACTNLSVFKHGKEIHCVLVRRLLSGHPFLSNSLLDLYTKGGMLVTASK 399
Query: 80 MFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCC----VSYTSMIMGFAQNDC 135
+F+ + D + N MI GY + +++ A E+F+ VSY +++ +
Sbjct: 400 IFNKITKKDVASWNTMILGYGMHGQIDIAFELFELMKGDGLDYDHVSYIAVLAACSHGGL 459
Query: 136 WREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWEC 174
+ + F M + P ++ A ++ G + +C
Sbjct: 460 VDKGKKYFSQMVAQNIEPQQMHYACMVDLLGRAGQLSKC 498
>gi|449517761|ref|XP_004165913.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like [Cucumis sativus]
Length = 600
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 169/507 (33%), Positives = 269/507 (53%), Gaps = 39/507 (7%)
Query: 195 NLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGL----VELARELFERIPSK 250
LLN CS++ E L M + N + +++ F A V F ++ +
Sbjct: 41 TLLNRIKNCSTINELHGLCASMIKTNAIQDCFLVHQFISASFALNSVHYPVFAFTQMENP 100
Query: 251 DVVSWGTMIDGYLQVERLSEALTMYRAMLCDG-IAPNDVMIVDLISACGRAMAFGEGLQI 309
+V + MI G++ AL Y ML + + P L+ AC A G +
Sbjct: 101 NVFVYNAMIKGFVYCGYPFRALQCYVHMLEESNVLPTSYTFSSLVKACTFMCAVELGQMV 160
Query: 310 HSIIVKAGFDCYDFIQATIIHFY-------------------------------AACGRI 338
H I K GF+ + F+Q ++ FY A G +
Sbjct: 161 HCHIWKKGFESHLFVQTALVDFYSKLEILSEARKVFDEMCERDAFAWTAMLSALARVGDM 220
Query: 339 NLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNE 398
+ AR FE + + A+WN +I G+ R G +E A LFN M +D+ SW+ MI+ Y+QN+
Sbjct: 221 DSARKLFEEMPERNTATWNTMIDGYTRLGNVESAELLFNQMPTKDIISWTTMITCYSQNK 280
Query: 399 QPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSA 458
Q AL ++ M G+ P+E+TM +V A A G L+ G+ H YV++ + L+ + +
Sbjct: 281 QYQDALAIYSEMRLNGIIPDEVTMSTVASACAHIGALELGKEIHHYVMSQGLNLDVYIGS 340
Query: 459 AIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNI 518
A++DMYAKCGS++ + +F+ + D+ ++ WNA+I GLA+HG A L++++ +E+ I
Sbjct: 341 ALVDMYAKCGSLDLSLLIFFKLTDK--NLYCWNAVIEGLAVHGYAEKALRMFAIMEREKI 398
Query: 519 KLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAE 578
N +TFI +LS C HAGLVD G F SM Y++ PD++HYGCMVD+L ++G L +A
Sbjct: 399 MPNGVTFISILSACTHAGLVDEGRSRFLSMTRDYDIRPDIRHYGCMVDMLSKSGYLNEAL 458
Query: 579 EVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAG 638
E+I+SM + + +IWG LL ++HGN E+ E A + L L+P + LL ++YA+
Sbjct: 459 ELIKSMEFEPNSIIWGALLNGCKLHGNCEIAEDAVEQLMILEPMNSGHYNLLVSMYAEEK 518
Query: 639 RWEDAFSIRKEMRDCGM-KRLPGFSGV 664
W + IR M++ G+ K+ PG S +
Sbjct: 519 DWMEVAHIRSMMKEKGVEKKYPGSSWI 545
Score = 152 bits (383), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 104/416 (25%), Positives = 182/416 (43%), Gaps = 65/416 (15%)
Query: 123 YTSMIMGFAQNDCWREALEVFRDM-RILGVIPNEVTLASVISSSVHLGGIWECRMLHGLV 181
Y +MI GF AL+ + M V+P T +S++ + + + +M+H +
Sbjct: 105 YNAMIKGFVYCGYPFRALQCYVHMLEESNVLPTSYTFSSLVKACTFMCAVELGQMVHCHI 164
Query: 182 IKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELAR 241
K + + + T L++ Y L EAR +FDEM ER+ +W ML+ A+ G ++ AR
Sbjct: 165 WKKGFESHLFVQTALVDFYSKLEILSEARKVFDEMCERDAFAWTAMLSALARVGDMDSAR 224
Query: 242 ELFERIPSKDVVSWGTMIDGYL-------------------------------QVERLSE 270
+LFE +P ++ +W TMIDGY Q ++ +
Sbjct: 225 KLFEEMPERNTATWNTMIDGYTRLGNVESAELLFNQMPTKDIISWTTMITCYSQNKQYQD 284
Query: 271 ALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIH 330
AL +Y M +GI P++V + + SAC A G +IH ++ G + +I + ++
Sbjct: 285 ALAIYSEMRLNGIIPDEVTMSTVASACAHIGALELGKEIHHYVMSQGLNLDVYIGSALVD 344
Query: 331 FYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAM 390
YA CG ++L+ L F ++ WNA+I G +G E A ++F M++
Sbjct: 345 MYAKCGSLDLSLLIFFKLTDKNLYCWNAVIEGLAVHGYAEKALRMFAIMEREK------- 397
Query: 391 ISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAH-EYVLNNS 449
+ PN +T +S+ A +G + EGR +
Sbjct: 398 ------------------------IMPNGVTFISILSACTHAGLVDEGRSRFLSMTRDYD 433
Query: 450 ITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANL 505
I + ++DM +K G +N A E+ + S+ W A++ G +HG+ +
Sbjct: 434 IRPDIRHYGCMVDMLSKSGYLNEALELIKSMEFEPNSII-WGALLNGCKLHGNCEI 488
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 109/427 (25%), Positives = 199/427 (46%), Gaps = 79/427 (18%)
Query: 13 QKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCG 72
+++N+ + Y + S ++ C+ AV GQ +H I+K G ES+ F+Q +L++ Y+K
Sbjct: 130 EESNVLPTSYTFS--SLVKACTFMCAVELGQMVHCHIWKKGFESHLFVQTALVDFYSKLE 187
Query: 73 LISQAKSMFDSCSTLDPVAC-------------------------------NIMISGYIR 101
++S+A+ +FD D A N MI GY R
Sbjct: 188 ILSEARKVFDEMCERDAFAWTAMLSALARVGDMDSARKLFEEMPERNTATWNTMIDGYTR 247
Query: 102 NDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASV 161
+ A +F++ P K +S+T+MI ++QN +++AL ++ +MR+ G+IP+EVT+++V
Sbjct: 248 LGNVESAELLFNQMPTKDIISWTTMITCYSQNKQYQDALAIYSEMRLNGIIPDEVTMSTV 307
Query: 162 ISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNI 221
S+ H+G + + +H V+ ++ V I + L++MY C SL + +F ++ ++N+
Sbjct: 308 ASACAHIGALELGKEIHHYVMSQGLNLDVYIGSALVDMYAKCGSLDLSLLIFFKLTDKNL 367
Query: 222 VSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCD 281
WN ++ G A G E +AL M+ M +
Sbjct: 368 YCWNAVIEGLAVHGYAE-------------------------------KALRMFAIMERE 396
Query: 282 GIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHF------YAAC 335
I PN V + ++SAC A EG S + D YD I+ I H+ +
Sbjct: 397 KIMPNGVTFISILSACTHAGLVDEG---RSRFLSMTRD-YD-IRPDIRHYGCMVDMLSKS 451
Query: 336 GRINLA-RLQFELGIKDHIASWNALIAGFIRNG---MIEDARQLFNNMQKRDVYSWSAMI 391
G +N A L + + + W AL+ G +G + EDA + ++ + ++ ++
Sbjct: 452 GYLNEALELIKSMEFEPNSIIWGALLNGCKLHGNCEIAEDAVEQLMILEPMNSGHYNLLV 511
Query: 392 SGYAQNE 398
S YA+ +
Sbjct: 512 SMYAEEK 518
>gi|357139571|ref|XP_003571354.1| PREDICTED: pentatricopeptide repeat-containing protein At1g53600,
mitochondrial-like [Brachypodium distachyon]
Length = 673
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 192/632 (30%), Positives = 305/632 (48%), Gaps = 70/632 (11%)
Query: 62 NSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCV 121
+L+ YA G + A+ +FD + + N ++S Y+R + A +F K P + V
Sbjct: 77 TALLTAYADNGDPASARLVFDDMPRRNAASWNALLSLYLRAGQPAAAHALFSKMPARNAV 136
Query: 122 SYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLV 181
SY +MI G A+ REA VF +M W R G
Sbjct: 137 SYGAMISGLARAGMLREAEAVFAEMP------------------------WRWRDPVG-- 170
Query: 182 IKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELAR 241
S L+ Y L A +F+ M R+++SW +++G K G V AR
Sbjct: 171 -----------SNALIAAYVRAGELSLALRVFEGMAVRDVISWTAVVDGLCKNGSVLEAR 219
Query: 242 ELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAM 301
++FE +P ++VVSW +MI GY+++ R + L +++ M +G+ N + + AC +
Sbjct: 220 KVFEAMPERNVVSWTSMILGYVKLGRRRDGLLLFQNMRREGVQVNTTTLSVALDACAESS 279
Query: 302 AFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIA 361
EG+QIH +I+ GF+ F+ ++I Y+ G + AR F + SWN+LI
Sbjct: 280 LVREGIQIHGLIIAMGFEMDVFLGDSLITLYSRFGWMVDARRVFAYMTWKDVVSWNSLIT 339
Query: 362 GFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHG------------ 409
G++++ M+E+A LF M ++D SW++M+ G+A A+ELF
Sbjct: 340 GYVQHNMVEEAHVLFKLMPEKDAVSWTSMVVGFANRGWITEAIELFEQMPGKDEVAWTAV 399
Query: 410 -------------------MVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSI 450
M G KPN I + A+AS L +G AH Y +N
Sbjct: 400 ISSLVTNGDYLSAVRWFCRMAQEGCKPNTIAFSCLLSALASLTMLNQGMQAHAYAINMGW 459
Query: 451 TLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIY 510
+ ++ +++ MYAKCG + A+ VF I + S+ N++I H K++
Sbjct: 460 IFDSSIHTSLVSMYAKCGRLAEAYHVFSSISN--PSLIATNSMITAFVQHDLVEDAFKLF 517
Query: 511 SDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGR 570
+ ++ K N +TF+G+L+ C AGLV G YF SMKSVY +EP+ HY CMVDLLGR
Sbjct: 518 TKMQNDGHKPNHVTFLGILTGCARAGLVQQGYNYFGSMKSVYGIEPNPDHYTCMVDLLGR 577
Query: 571 AGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLL 630
AG L +A E+I SMP + W LL+AS +H ++ + AA+ L + P + +L
Sbjct: 578 AGLLAEALEMINSMPQNDNSDAWAALLSASSLHSSLTFAKIAAQKLLEMDPYDATAYTVL 637
Query: 631 SNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
SN+++ AG D ++ + PG+S
Sbjct: 638 SNMFSSAGMKNDEEMLKVVQLSNMASKSPGYS 669
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 122/508 (24%), Positives = 218/508 (42%), Gaps = 105/508 (20%)
Query: 48 LIFKSGLESNTFIQNSLINLY-------------------------------AKCGLISQ 76
L+F N N+L++LY A+ G++ +
Sbjct: 94 LVFDDMPRRNAASWNALLSLYLRAGQPAAAHALFSKMPARNAVSYGAMISGLARAGMLRE 153
Query: 77 AKSMFDSCS--TLDPVACNIMISGYIRNDRLN---------------------------- 106
A+++F DPV N +I+ Y+R L+
Sbjct: 154 AEAVFAEMPWRWRDPVGSNALIAAYVRAGELSLALRVFEGMAVRDVISWTAVVDGLCKNG 213
Query: 107 ---DAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVIS 163
+AR+VF+ P + VS+TSMI+G+ + R+ L +F++MR GV N TL+ +
Sbjct: 214 SVLEARKVFEAMPERNVVSWTSMILGYVKLGRRRDGLLLFQNMRREGVQVNTTTLSVALD 273
Query: 164 SSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVS 223
+ + E +HGL+I + + V + +L+ +Y +V+AR +F M +++VS
Sbjct: 274 ACAESSLVREGIQIHGLIIAMGFEMDVFLGDSLITLYSRFGWMVDARRVFAYMTWKDVVS 333
Query: 224 WNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAM----- 278
WN ++ G+ + +VE A LF+ +P KD VSW +M+ G+ ++EA+ ++ M
Sbjct: 334 WNSLITGYVQHNMVEEAHVLFKLMPEKDAVSWTSMVVGFANRGWITEAIELFEQMPGKDE 393
Query: 279 ----------------------LC----DGIAPNDVMIVDLISACGRAMAFGEGLQIHSI 312
C +G PN + L+SA +G+Q H+
Sbjct: 394 VAWTAVISSLVTNGDYLSAVRWFCRMAQEGCKPNTIAFSCLLSALASLTMLNQGMQAHAY 453
Query: 313 IVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDA 372
+ G+ I +++ YA CGR+ A F + + N++I F+++ ++EDA
Sbjct: 454 AINMGWIFDSSIHTSLVSMYAKCGRLAEAYHVFSSISNPSLIATNSMITAFVQHDLVEDA 513
Query: 373 RQLFNNMQ----KRDVYSWSAMISGYAQNEQPNMALELFHGMVDA-GVKPNEITMVSVFC 427
+LF MQ K + ++ +++G A+ F M G++PN +
Sbjct: 514 FKLFTKMQNDGHKPNHVTFLGILTGCARAGLVQQGYNYFGSMKSVYGIEPNPDHYTCMVD 573
Query: 428 AIASSGTLKEGRWAHEYVLNNSITLNDN 455
+ +G L E A E + NS+ NDN
Sbjct: 574 LLGRAGLLAE---ALEMI--NSMPQNDN 596
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/369 (24%), Positives = 172/369 (46%), Gaps = 52/369 (14%)
Query: 26 LVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCS 85
L AL C+ V +G QIH LI G E + F+ +SLI LY++ G + A+ +F +
Sbjct: 268 LSVALDACAESSLVREGIQIHGLIIAMGFEMDVFLGDSLITLYSRFGWMVDARRVFAYMT 327
Query: 86 TLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRD 145
D V+ N +I+GY++++ + +A +F P K VS+TSM++GFA EA+E+F
Sbjct: 328 WKDVVSWNSLITGYVQHNMVEEAHVLFKLMPEKDAVSWTSMVVGFANRGWITEAIELFEQ 387
Query: 146 MRILGVIPNEVTLASVISSSVHLGGI-WECRMLHGLVIKLMIDGFVIISTNLLNMYCVCS 204
M + ++S++++ +L + W CRM +G N + C+ S
Sbjct: 388 MPGKDEVAWTAVISSLVTNGDYLSAVRWFCRMAQ--------EG---CKPNTIAFSCLLS 436
Query: 205 SLVEARSLFDEMKERNI---VSW-------NVMLNGFAKAGLVELARELFERIPSKDVVS 254
+L L M+ + W +++ +AK G + A +F I + +++
Sbjct: 437 ALASLTMLNQGMQAHAYAINMGWIFDSSIHTSLVSMYAKCGRLAEAYHVFSSISNPSLIA 496
Query: 255 WGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIV 314
+MI ++Q + + +A ++ M DG PN V + +++ C RA GL V
Sbjct: 497 TNSMITAFVQHDLVEDAFKLFTKMQNDGHKPNHVTFLGILTGCARA-----GL------V 545
Query: 315 KAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQ 374
+ G++ + +++ GI+ + + ++ R G++ +A +
Sbjct: 546 QQGYNYFGSMKSV-------------------YGIEPNPDHYTCMVDLLGRAGLLAEALE 586
Query: 375 LFNNMQKRD 383
+ N+M + D
Sbjct: 587 MINSMPQND 595
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 127/307 (41%), Gaps = 60/307 (19%)
Query: 357 NALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQP---------------- 400
NAL+ + R GM+ DA+QLF+ M +RDV SW+A+++ YA N P
Sbjct: 46 NALLTSYGRRGMLRDAQQLFDRMPRRDVISWTALLTAYADNGDPASARLVFDDMPRRNAA 105
Query: 401 --NMALELF---------HGMVDAGVKPNEITMVSVFCAIASSGTLKEG---------RW 440
N L L+ H + N ++ ++ +A +G L+E RW
Sbjct: 106 SWNALLSLYLRAGQPAAAHALFSKMPARNAVSYGAMISGLARAGMLREAEAVFAEMPWRW 165
Query: 441 AHE---------YVLNNSITL----------NDNLS-AAIIDMYAKCGSINTAFEVFYHI 480
YV ++L D +S A++D K GS+ A +VF +
Sbjct: 166 RDPVGSNALIAAYVRAGELSLALRVFEGMAVRDVISWTAVVDGLCKNGSVLEARKVFEAM 225
Query: 481 RDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDL 540
+R +V W ++I G G L ++ ++ + +++N+ T L C + LV
Sbjct: 226 PER--NVVSWTSMILGYVKLGRRRDGLLLFQNMRREGVQVNTTTLSVALDACAESSLVRE 283
Query: 541 GERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAAS 600
G + + E D+ ++ L R G + DA V M K DVV W +L+
Sbjct: 284 GIQ-IHGLIIAMGFEMDVFLGDSLITLYSRFGWMVDARRVFAYMTWK-DVVSWNSLITGY 341
Query: 601 RIHGNVE 607
H VE
Sbjct: 342 VQHNMVE 348
>gi|347954490|gb|AEP33745.1| chloroplast biogenesis 19, partial [Arabis hirsuta]
Length = 435
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 151/394 (38%), Positives = 234/394 (59%), Gaps = 6/394 (1%)
Query: 275 YRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQ--IHSIIVKAGFD-CYDFIQATIIHF 331
+ M G+ PN + + L+S G ++ E L +H K G D + + I+
Sbjct: 2 FSGMRLAGVEPNHITFIALLSGWGDLLSGSEALGDLLHGYACKLGLDRAHVMVGTAILGM 61
Query: 332 YAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMI 391
Y+ GR ARL F+ + + +WN +I G++RNG ++DA +LF+ M +RD+ SW+AMI
Sbjct: 62 YSKRGRFRKARLVFDYMEEKNSVTWNTMIDGYMRNGQVDDAVKLFDEMPERDLISWTAMI 121
Query: 392 SGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSIT 451
+G+ + AL F M +GVKP+ + +++ A + G L G W H YV++
Sbjct: 122 NGFVKKGFHEEALAWFREMQISGVKPDYVAIIAALAACTNLGALSFGLWIHRYVVSQDFK 181
Query: 452 LNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYS 511
N +S ++ID+Y +CG + A +VF + RT V WN++I G A +G A+ +L +
Sbjct: 182 NNVRVSNSLIDLYCRCGCVEFARQVFDKMEKRT--VVSWNSVIVGFAANGHAHESLVYFR 239
Query: 512 DLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRA 571
+++ K N++TF G L+ C H GLV+ G RYF+SMK Y + P ++HYGC+VDL RA
Sbjct: 240 KMQEEGFKPNAVTFTGALAACNHVGLVEEGLRYFQSMKRDYRISPRIEHYGCLVDLYSRA 299
Query: 572 GQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEV-GERAAKSLAGLQPSHGPSRVLL 630
G+LEDA +V++SMPMK + V+ G+LLAA R GN V ER K L+ L + V+L
Sbjct: 300 GRLEDALKVVQSMPMKPNEVVIGSLLAACRTQGNNTVLAERVMKHLSDLNVKSHSNYVIL 359
Query: 631 SNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
SN+YA G+WE A +R++M+ G+K+ PGFS +
Sbjct: 360 SNMYAADGKWEGASKMRRKMKGLGLKKEPGFSSI 393
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 99/338 (29%), Positives = 160/338 (47%), Gaps = 35/338 (10%)
Query: 143 FRDMRILGVIPNEVTLASVISSSVHL--GGIWECRMLHGLVIKLMID-GFVIISTNLLNM 199
F MR+ GV PN +T +++S L G +LHG KL +D V++ T +L M
Sbjct: 2 FSGMRLAGVEPNHITFIALLSGWGDLLSGSEALGDLLHGYACKLGLDRAHVMVGTAILGM 61
Query: 200 YCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMI 259
Y +AR +FD M+E+N V+WN M++G+ + G V+ A +LF+ +P +D++SW MI
Sbjct: 62 YSKRGRFRKARLVFDYMEEKNSVTWNTMIDGYMRNGQVDDAVKLFDEMPERDLISWTAMI 121
Query: 260 DGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFD 319
+G+++ EAL +R M G+ P+ V I+ ++AC A GL IH +V F
Sbjct: 122 NGFVKKGFHEEALAWFREMQISGVKPDYVAIIAALAACTNLGALSFGLWIHRYVVSQDFK 181
Query: 320 CYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNM 379
+ ++I Y CG + AR F+ K + SWN++I GF NG ++ F M
Sbjct: 182 NNVRVSNSLIDLYCRCGCVEFARQVFDKMEKRTVVSWNSVIVGFAANGHAHESLVYFRKM 241
Query: 380 QKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG- 438
Q + G KPN +T A G ++EG
Sbjct: 242 Q-------------------------------EEGFKPNAVTFTGALAACNHVGLVEEGL 270
Query: 439 RWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEV 476
R+ + I+ ++D+Y++ G + A +V
Sbjct: 271 RYFQSMKRDYRISPRIEHYGCLVDLYSRAGRLEDALKV 308
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 87/301 (28%), Positives = 154/301 (51%), Gaps = 52/301 (17%)
Query: 42 GQQIHSLIFKSGLE-SNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYI 100
G +H K GL+ ++ + +++ +Y+K G +A+ +FD + V N MI GY+
Sbjct: 35 GDLLHGYACKLGLDRAHVMVGTAILGMYSKRGRFRKARLVFDYMEEKNSVTWNTMIDGYM 94
Query: 101 RNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLAS 160
RN +++DA ++FD+ P + +S+T+MI GF + EAL FR+M+I GV P+ V + +
Sbjct: 95 RNGQVDDAVKLFDEMPERDLISWTAMINGFVKKGFHEEALAWFREMQISGVKPDYVAIIA 154
Query: 161 VISSSVHLG----GIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEM 216
+++ +LG G+W +H V+ V +S +L+++YC C + AR +FD+M
Sbjct: 155 ALAACTNLGALSFGLW----IHRYVVSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFDKM 210
Query: 217 KERNIVSWNVMLNGFA-----------------------------------KAGLVELAR 241
++R +VSWN ++ GFA GLVE
Sbjct: 211 EKRTVVSWNSVIVGFAANGHAHESLVYFRKMQEEGFKPNAVTFTGALAACNHVGLVEEGL 270
Query: 242 ELFERIP-----SKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISA 296
F+ + S + +G ++D Y + RL +AL + ++M + PN+V+I L++A
Sbjct: 271 RYFQSMKRDYRISPRIEHYGCLVDLYSRAGRLEDALKVVQSM---PMKPNEVVIGSLLAA 327
Query: 297 C 297
C
Sbjct: 328 C 328
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 71/153 (46%), Gaps = 32/153 (20%)
Query: 21 DYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSM 80
DY +A+++AL C+ A+S G IH + ++N + NSLI+LY +CG + A+ +
Sbjct: 148 DY-VAIIAALAACTNLGALSFGLWIHRYVVSQDFKNNVRVSNSLIDLYCRCGCVEFARQV 206
Query: 81 FDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREAL 140
F DK + VS+ S+I+GFA N E+L
Sbjct: 207 F-------------------------------DKMEKRTVVSWNSVIVGFAANGHAHESL 235
Query: 141 EVFRDMRILGVIPNEVTLASVISSSVHLGGIWE 173
FR M+ G PN VT +++ H+G + E
Sbjct: 236 VYFRKMQEEGFKPNAVTFTGALAACNHVGLVEE 268
>gi|449438512|ref|XP_004137032.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Cucumis sativus]
gi|449526872|ref|XP_004170437.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41080-like [Cucumis sativus]
Length = 667
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 154/505 (30%), Positives = 268/505 (53%), Gaps = 33/505 (6%)
Query: 158 LASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMK 217
+ ++ S + LG ++ + +H L+I IS +LLN Y + LF M
Sbjct: 65 FSHLLQSCIKLGSLFGGKQVHSLIITSGGSKDKFISNHLLNFYSKLGQFKSSLVLFSNMP 124
Query: 218 ERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRA 277
RN++S+N+++NG+ + G +E A++LF+ + +++ +W MI G Q E +AL++++
Sbjct: 125 RRNVMSFNILINGYLQLGDLESAQKLFDEMSERNIATWNAMIAGLTQFEFNKQALSLFKE 184
Query: 278 MLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGR 337
M G P++ + ++ C + G ++H+ ++K GF+ + +++ H Y
Sbjct: 185 MYGLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACLLKCGFELSSVVGSSLAHMY----- 239
Query: 338 INLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQN 397
I++G + D +L +M R V +W+ +I+G AQN
Sbjct: 240 --------------------------IKSGSLSDGEKLIKSMPIRTVVAWNTLIAGKAQN 273
Query: 398 EQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLS 457
P L ++ M AG +P++IT VSV A + TL +G+ H V+ + +
Sbjct: 274 GCPEEVLNQYNMMKMAGFRPDKITFVSVLSACSELATLGQGQQIHAEVIKAGASSVLAVV 333
Query: 458 AAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRN 517
+++I MY++ G + + + F + V W+++I HG L+++ +E
Sbjct: 334 SSLISMYSRSGCLEDSIKAF--VDRENFDVVLWSSMIAAYGFHGRGEEALELFHQMEDLK 391
Query: 518 IKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDA 577
++ N +TF+ +L C H+GL + G YF M Y ++P ++HY C+VDLLGRAG+LE+A
Sbjct: 392 MEANEVTFLSLLYACSHSGLKEKGTEYFDLMVKKYKLKPRIEHYTCVVDLLGRAGRLEEA 451
Query: 578 EEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADA 637
E +IRSMP++ D +IW TLLAA ++H E+ ER ++ + L P S VLLSNI+A A
Sbjct: 452 EGMIRSMPVQPDGIIWKTLLAACKLHKEAEMAERISEEIIKLDPLDAASYVLLSNIHASA 511
Query: 638 GRWEDAFSIRKEMRDCGMKRLPGFS 662
W + IRK MRD +++ PG S
Sbjct: 512 RNWLNVSQIRKAMRDRSVRKEPGIS 536
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 124/480 (25%), Positives = 223/480 (46%), Gaps = 74/480 (15%)
Query: 42 GQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIR 101
G+Q+HSLI SG + FI N L+N Y+K G + +F + + ++ NI+I+GY++
Sbjct: 81 GKQVHSLIITSGGSKDKFISNHLLNFYSKLGQFKSSLVLFSNMPRRNVMSFNILINGYLQ 140
Query: 102 NDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASV 161
L A+++FD+ + ++ +MI G Q + ++AL +F++M LG +P+E TL SV
Sbjct: 141 LGDLESAQKLFDEMSERNIATWNAMIAGLTQFEFNKQALSLFKEMYGLGFLPDEFTLGSV 200
Query: 162 ISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNI 221
+ L + + +H ++K + ++ ++L +MY SL + L M R +
Sbjct: 201 LRGCAGLRSLLAGQEVHACLLKCGFELSSVVGSSLAHMYIKSGSLSDGEKLIKSMPIRTV 260
Query: 222 VSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCD 281
V+WN ++ G A+ G E E L Y M
Sbjct: 261 VAWNTLIAGKAQNGCPE-------------------------------EVLNQYNMMKMA 289
Query: 282 GIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLA 341
G P+ + V ++SAC G+G QIH+ ++KAG A+ +
Sbjct: 290 GFRPDKITFVSVLSACSELATLGQGQQIHAEVIKAG--------ASSV------------ 329
Query: 342 RLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPN 401
+A ++LI+ + R+G +ED+ + F + + DV WS+MI+ Y + +
Sbjct: 330 -----------LAVVSSLISMYSRSGCLEDSIKAFVDRENFDVVLWSSMIAAYGFHGRGE 378
Query: 402 MALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLS--AA 459
ALELFH M D ++ NE+T +S+ A + SG LKE + ++ L +
Sbjct: 379 EALELFHQMEDLKMEANEVTFLSLLYACSHSG-LKEKGTEYFDLMVKKYKLKPRIEHYTC 437
Query: 460 IIDMYAKCGSINTAFEVFYHIRDRTTSVSP----WNAIICGLAMHGDANLTLKIYSDLEK 515
++D+ + G + A + R+ V P W ++ +H +A + +I ++ K
Sbjct: 438 VVDLLGRAGRLEEAEGMI-----RSMPVQPDGIIWKTLLAACKLHKEAEMAERISEEIIK 492
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 112/245 (45%), Gaps = 38/245 (15%)
Query: 10 FNSQKANLQNSDY-------ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQN 62
FN Q +L Y E L S LR C+ ++ GQ++H+ + K G E ++ + +
Sbjct: 174 FNKQALSLFKEMYGLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACLLKCGFELSSVVGS 233
Query: 63 SLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVS 122
SL ++Y K G +S + + S PI+ V+
Sbjct: 234 SLAHMYIKSGSLSDGEKLIKS-------------------------------MPIRTVVA 262
Query: 123 YTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVI 182
+ ++I G AQN C E L + M++ G P+++T SV+S+ L + + + +H VI
Sbjct: 263 WNTLIAGKAQNGCPEEVLNQYNMMKMAGFRPDKITFVSVLSACSELATLGQGQQIHAEVI 322
Query: 183 KLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARE 242
K + + ++L++MY L ++ F + + ++V W+ M+ + G E A E
Sbjct: 323 KAGASSVLAVVSSLISMYSRSGCLEDSIKAFVDRENFDVVLWSSMIAAYGFHGRGEEALE 382
Query: 243 LFERI 247
LF ++
Sbjct: 383 LFHQM 387
>gi|242051244|ref|XP_002463366.1| hypothetical protein SORBIDRAFT_02g042450 [Sorghum bicolor]
gi|241926743|gb|EER99887.1| hypothetical protein SORBIDRAFT_02g042450 [Sorghum bicolor]
Length = 745
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 191/628 (30%), Positives = 314/628 (50%), Gaps = 109/628 (17%)
Query: 43 QQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRN 102
+Q+H+L ++G+ ++ F+ N+L+ Y++ GL
Sbjct: 168 RQLHALASRAGIATDVFVGNALVTAYSRGGL----------------------------- 198
Query: 103 DRLNDAREVFDKTPIKCCVSYTSMIMGFAQN-DCWREALEVFRDMRILG-VIPNEVTLAS 160
++ AR+VF++ P + VS+ +++ G AQ+ +C E + VF M G V P+ +++ S
Sbjct: 199 --MDAARKVFEEMPARDLVSWNALVCGLAQDGECSAEVIRVFLRMLKQGDVRPDRISVCS 256
Query: 161 VISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERN 220
VI + G + R +HG +KL ++G V I+ L+ MY C
Sbjct: 257 VIPACGAEGKLELGRQIHGFAVKLGVEGHVSIANVLVAMYYKC----------------- 299
Query: 221 IVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMI--DGYLQVERLSEALTMYRAM 278
G AR LFE + +DV+SW T++ DG +A++++ M
Sbjct: 300 --------------GTPGCARRLFEFMGERDVISWTTVMSMDG-------EDAVSLFNGM 338
Query: 279 LCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRI 338
DG+APN+V V ++S+ EG IH++ +K
Sbjct: 339 RRDGVAPNEVTFVAMLSSMPGDCPAREGQMIHAVCLKTS--------------------- 377
Query: 339 NLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNE 398
+ D A+ N+LI + + ++DAR +F+ M ++ +W+A+ISGYAQNE
Sbjct: 378 ----------LSDKAAAANSLITMYAKLRRMDDARMIFSLMPHSEIIAWNALISGYAQNE 427
Query: 399 QPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGT--LKEGRWAHEYVLNNSITLNDNL 456
ALE F M+ +KPNE T S+ A+ + T + G+ H L + ++ +
Sbjct: 428 MCQDALEAFLAMMKI-MKPNETTFASILSAVTAVETVSMAYGQMYHCQALKLGLGASEYV 486
Query: 457 SAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKR 516
S A+IDMYAK GS+ +++ F R S+ W AII + HG+ + + +++D+
Sbjct: 487 SGALIDMYAKRGSLEESWKAFGETVHR--SLIAWTAIISANSKHGNYDAVVSLFNDMVGS 544
Query: 517 NIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLED 576
+ + + + VL+ C ++G V LG F SM + + E +HY C+VD+LGRAG+LE+
Sbjct: 545 GVAPDGVVLLSVLTACRYSGFVSLGREIFDSMAAKHGAELWPEHYACVVDMLGRAGRLEE 604
Query: 577 AEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYAD 636
AEE++ MP V +LL A RIHGN +VGER A L +P+ + VLLSNIYA+
Sbjct: 605 AEELMLQMPSGPSVSALQSLLGACRIHGNTDVGERVASVLTETEPTESGAYVLLSNIYAE 664
Query: 637 AGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
G W +R++MR+ G+K+ GFS V
Sbjct: 665 KGDWGAVARVRRQMRERGVKKEVGFSWV 692
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 138/572 (24%), Positives = 229/572 (40%), Gaps = 119/572 (20%)
Query: 45 IHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDR 104
H+L SGL + + NSL YAK A +F + + D + N ++S D
Sbjct: 71 FHALAVASGLAAFAPVTNSLAARYAKGNSFPAAARVFAAARSRDTRSYNTILSATPDPD- 129
Query: 105 LNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISS 164
DA + FA R +R V P+ VT +S
Sbjct: 130 --DA-------------------LAFAA-----------RMLRTGDVRPDAVTFTVTLSL 157
Query: 165 SVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSW 224
+ G R LH L + I V + L+ Y + AR +F+EM R++VSW
Sbjct: 158 AAGRGEAHLVRQLHALASRAGIATDVFVGNALVTAYSRGGLMDAARKVFEEMPARDLVSW 217
Query: 225 NVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDG-I 283
N ++ G A+ G E +E + ++ ML G +
Sbjct: 218 NALVCGLAQDG------------------------------ECSAEVIRVFLRMLKQGDV 247
Query: 284 APNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARL 343
P+ + + +I ACG G QIH VK G + + I ++ Y CG AR
Sbjct: 248 RPDRISVCSVIPACGAEGKLELGRQIHGFAVKLGVEGHVSIANVLVAMYYKCGTPGCAR- 306
Query: 344 QFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMA 403
+LF M +RDV SW+ ++S ++ A
Sbjct: 307 ------------------------------RLFEFMGERDVISWTTVMSMDGED-----A 331
Query: 404 LELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDM 463
+ LF+GM GV PNE+T V++ ++ +EG+ H L S++ + ++I M
Sbjct: 332 VSLFNGMRRDGVAPNEVTFVAMLSSMPGDCPAREGQMIHAVCLKTSLSDKAAAANSLITM 391
Query: 464 YAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSI 523
YAK ++ A +F + + + WNA+I G A + L+ + + K +K N
Sbjct: 392 YAKLRRMDDARMIFSLMPH--SEIIAWNALISGYAQNEMCQDALEAFLAMMK-IMKPNET 448
Query: 524 TFIGVLSTCCHAGLVDL--GERYF-KSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDA--- 577
TF +LS V + G+ Y +++K + G ++D+ + G LE++
Sbjct: 449 TFASILSAVTAVETVSMAYGQMYHCQALKLGLGASEYVS--GALIDMYAKRGSLEESWKA 506
Query: 578 --EEVIRSMPMKADVVIWGTLLAASRIHGNVE 607
E V RS+ + W +++A+ HGN +
Sbjct: 507 FGETVHRSL------IAWTAIISANSKHGNYD 532
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 108/497 (21%), Positives = 202/497 (40%), Gaps = 107/497 (21%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+++ S + C A + G+QIH K G+E + I N L+ +Y KCG A+ +F+
Sbjct: 252 ISVCSVIPACGAEGKLELGRQIHGFAVKLGVEGHVSIANVLVAMYYKCGTPGCARRLFEF 311
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
D +S+T+ +M D A+ +F
Sbjct: 312 MGERD-------------------------------VISWTT-VMSMDGED----AVSLF 335
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
MR GV PNEVT +++SS E +M+H + +K + + +L+ MY
Sbjct: 336 NGMRRDGVAPNEVTFVAMLSSMPGDCPAREGQMIHAVCLKTSLSDKAAAANSLITMYAKL 395
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYL 263
+ +AR +F M I++WN +++G+A+ + + A E F
Sbjct: 396 RRMDDARMIFSLMPHSEIIAWNALISGYAQNEMCQDALEAF------------------- 436
Query: 264 QVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGR----AMAFGEGLQIHSIIVKAGFD 319
L M + M PN+ ++SA +MA+G+ H +K G
Sbjct: 437 --------LAMMKIM-----KPNETTFASILSAVTAVETVSMAYGQ--MYHCQALKLGLG 481
Query: 320 CYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNM 379
+++ +I YA + G +E++ + F
Sbjct: 482 ASEYVSGALIDMYA-------------------------------KRGSLEESWKAFGET 510
Query: 380 QKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGR 439
R + +W+A+IS +++ + + LF+ MV +GV P+ + ++SV A SG + GR
Sbjct: 511 VHRSLIAWTAIISANSKHGNYDAVVSLFNDMVGSGVAPDGVVLLSVLTACRYSGFVSLGR 570
Query: 440 WAHEYV-LNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLA 498
+ + + L A ++DM + G + A E+ + SVS +++
Sbjct: 571 EIFDSMAAKHGAELWPEHYACVVDMLGRAGRLEEAEELMLQM-PSGPSVSALQSLLGACR 629
Query: 499 MHGDANLTLKIYSDLEK 515
+HG+ ++ ++ S L +
Sbjct: 630 IHGNTDVGERVASVLTE 646
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 77/337 (22%), Positives = 141/337 (41%), Gaps = 67/337 (19%)
Query: 8 SVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINL 67
S+FN + + + E+ V+ L +GQ IH++ K+ L NSLI +
Sbjct: 333 SLFNGMRRDGVAPN-EVTFVAMLSSMPGDCPAREGQMIHAVCLKTSLSDKAAAANSLITM 391
Query: 68 YAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMI 127
YAK + A+ +F + +A N +ISGY +N+ DA E F
Sbjct: 392 YAKLRRMDDARMIFSLMPHSEIIAWNALISGYAQNEMCQDALEAF--------------- 436
Query: 128 MGFAQNDCWREALEVFRDMRILGVIPNEVTLASVIS--SSVHLGGIWECRMLHGLVIKLM 185
L + + M+ PNE T AS++S ++V + +M H +KL
Sbjct: 437 ------------LAMMKIMK-----PNETTFASILSAVTAVETVSMAYGQMYHCQALKLG 479
Query: 186 IDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFE 245
+ +S L++MY SL E+ F E R++++W +++ +K G
Sbjct: 480 LGASEYVSGALIDMYAKRGSLEESWKAFGETVHRSLIAWTAIISANSKHG---------- 529
Query: 246 RIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGE 305
+ D V ++++ M+ G+AP+ V+++ +++AC +
Sbjct: 530 ---NYDAV------------------VSLFNDMVGSGVAPDGVVLLSVLTACRYSGFVSL 568
Query: 306 GLQI-HSIIVKAGFDCYDFIQATIIHFYAACGRINLA 341
G +I S+ K G + + A ++ GR+ A
Sbjct: 569 GREIFDSMAAKHGAELWPEHYACVVDMLGRAGRLEEA 605
>gi|345505212|gb|AEN99830.1| chlororespiratory reduction 4, partial [Brassica oleracea]
Length = 590
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 185/533 (34%), Positives = 285/533 (53%), Gaps = 51/533 (9%)
Query: 137 REALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNL 196
R+AL + M V ++ +L+ + + LG + E +HG +IK + + L
Sbjct: 88 RKALFLLCLMLESSVPVDKFSLSLALKACSRLGFVKEGTQVHGFLIKTGTWSDLFLQNCL 147
Query: 197 LNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIP--SKDVVS 254
+ +Y C L AR +FD M ER+ VS+N M++G+ K GLVE A ELF+ +P +++++
Sbjct: 148 IGLYIKCGFLGFARQVFDRMPERDSVSYNSMIDGYVKCGLVESAGELFDLMPREKRNLIT 207
Query: 255 WGTMIDGYLQ-VERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSII 313
W +MI GY Q + + A ++ M P DLIS
Sbjct: 208 WNSMIGGYAQRADGVDVAEKLFDEM------PEK----DLIS------------------ 239
Query: 314 VKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDAR 373
++I Y GRI A+ F + + + +W +I G+ + G++ A+
Sbjct: 240 -----------WNSMIGGYVKHGRIEDAKGLFNVMPRRDVVTWAIMIDGYGKLGLVHVAK 288
Query: 374 QLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGM-VDAGVKPNEITMVSVFCAIASS 432
LF+ M RDV ++++M+SGY QN ALE+F+ M ++ + P+E ++V V AIA
Sbjct: 289 TLFDQMPHRDVVAYNSMMSGYVQNRYHMEALEVFNHMEKESHLTPDETSLVIVLSAIAQL 348
Query: 433 GTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNA 492
G L + H Y++ L+ L A+IDMY+KCGSI A VF I + S+ WNA
Sbjct: 349 GRLSKAIDMHLYIVEKQFPLSGKLGVALIDMYSKCGSIQHAMRVFEGIESK--SIDHWNA 406
Query: 493 IICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVY 552
+I GLA+HG + +E+R+IK + ITF+GVL+ C H+GLV G F+ M+ +
Sbjct: 407 MIGGLAVHGLGESAFDMLFQIERRSIKPDHITFVGVLNACSHSGLVKEGLLCFELMRRKH 466
Query: 553 NVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERA 612
+EP L+HYGCMVD+L R+G ++ A +I MP++ + VIW T L A H E GE
Sbjct: 467 KIEPRLQHYGCMVDILARSGSIKLARNLIEGMPIEPNDVIWRTFLTACSHHKEFETGELV 526
Query: 613 AKSL---AGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
AK L G PS S VLLSN+YA G W+D +R M++ ++++PG S
Sbjct: 527 AKHLILXGGYNPS---SYVLLSNMYASNGMWKDVRRVRTMMKEKNIEKIPGCS 576
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 125/455 (27%), Positives = 208/455 (45%), Gaps = 73/455 (16%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
+ +L AL+ CS V +G Q+H + K+G S+ F+QN LI LY KCG + A+ +FD
Sbjct: 106 KFSLSLALKACSRLGFVKEGTQVHGFLIKTGTWSDLFLQNCLIGLYIKCGFLGFARQVFD 165
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTP--IKCCVSYTSMIMGFAQNDCWREAL 140
D V+ N MI GY++ + A E+FD P + +++ SMI G+AQ +
Sbjct: 166 RMPERDSVSYNSMIDGYVKCGLVESAGELFDLMPREKRNLITWNSMIGGYAQRADGVDVA 225
Query: 141 EVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMY 200
E D E+ +IS + +GG Y
Sbjct: 226 EKLFD---------EMPEKDLISWNSMIGG-----------------------------Y 247
Query: 201 CVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMID 260
+ +A+ LF+ M R++V+W +M++G+ K GLV +A+ LF+++P +DVV++ +M+
Sbjct: 248 VKHGRIEDAKGLFNVMPRRDVVTWAIMIDGYGKLGLVHVAKTLFDQMPHRDVVAYNSMMS 307
Query: 261 GYLQVERLSEALTMYRAMLCDG-IAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFD 319
GY+Q EAL ++ M + + P++ +V ++SA + + + +H IV+ F
Sbjct: 308 GYVQNRYHMEALEVFNHMEKESHLTPDETSLVIVLSAIAQLGRLSKAIDMHLYIVEKQFP 367
Query: 320 CYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNM 379
+ +I Y+ CG I A FE I WNA+I G +G+ E A + +
Sbjct: 368 LSGKLGVALIDMYSKCGSIQHAMRVFEGIESKSIDHWNAMIGGLAVHGLGESAFDMLFQI 427
Query: 380 QKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGR 439
++R +KP+ IT V V A + SG +KEG
Sbjct: 428 ERRS-------------------------------IKPDHITFVGVLNACSHSGLVKEGL 456
Query: 440 WAHEYV-LNNSITLNDNLSAAIIDMYAKCGSINTA 473
E + + I ++D+ A+ GSI A
Sbjct: 457 LCFELMRRKHKIEPRLQHYGCMVDILARSGSIKLA 491
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 98/389 (25%), Positives = 178/389 (45%), Gaps = 36/389 (9%)
Query: 250 KDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQI 309
+D W +I + +AL + ML + + + + AC R EG Q+
Sbjct: 69 EDPFLWNVVIKSHSHGVDPRKALFLLCLMLESSVPVDKFSLSLALKACSRLGFVKEGTQV 128
Query: 310 HSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMI 369
H ++K G F+Q +I Y CG + AR F+ + S+N++I G+++ G++
Sbjct: 129 HGFLIKTGTWSDLFLQNCLIGLYIKCGFLGFARQVFDRMPERDSVSYNSMIDGYVKCGLV 188
Query: 370 EDARQLFNNM--QKRDVYSWSAMISGYAQN-EQPNMALELFHGMVDAGVKPNEITMVSVF 426
E A +LF+ M +KR++ +W++MI GYAQ + ++A +LF M E ++S
Sbjct: 189 ESAGELFDLMPREKRNLITWNSMIGGYAQRADGVDVAEKLFDEM-------PEKDLISWN 241
Query: 427 CAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAI-IDMYAKCGSINTAFEVFYHIRDRTT 485
I G +K GR L N + D ++ AI ID Y K G ++ A +F + R
Sbjct: 242 SMIG--GYVKHGRIEDAKGLFNVMPRRDVVTWAIMIDGYGKLGLVHVAKTLFDQMPHR-- 297
Query: 486 SVSPWNAIICGLAMHGDANLTLKIYSDLEKR-NIKLNSITFIGVLSTCCHAGLVDLGERY 544
V +N+++ G + L++++ +EK ++ + + + VLS G R
Sbjct: 298 DVVAYNSMMSGYVQNRYHMEALEVFNHMEKESHLTPDETSLVIVLSAIAQLG------RL 351
Query: 545 FKSMK-SVYNVEPDLKHYG----CMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAA 599
K++ +Y VE G ++D+ + G ++ A V + K+ + W ++
Sbjct: 352 SKAIDMHLYIVEKQFPLSGKLGVALIDMYSKCGSIQHAMRVFEGIESKS-IDHWNAMIGG 410
Query: 600 SRIHGNVEVGERAAKSL-----AGLQPSH 623
+HG +GE A L ++P H
Sbjct: 411 LAVHG---LGESAFDMLFQIERRSIKPDH 436
>gi|356536721|ref|XP_003536884.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g62890-like [Glycine max]
Length = 1116
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 159/424 (37%), Positives = 237/424 (55%), Gaps = 11/424 (2%)
Query: 248 PSKDVVSWGTMIDG----YLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAF 303
P+ + W +I +Q AL++Y M + P+ L+ +
Sbjct: 20 PNIESFVWNNLIRASTRSRVQNPAFPPALSLYLRMRLHAVLPDLHTFPFLLQSINTP--- 76
Query: 304 GEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGF 363
G Q+H+ I+ G F+Q ++I+ Y++CG AR F+ + + SWNA+I
Sbjct: 77 HRGRQLHAQILLLGLANDPFVQTSLINMYSSCGTPTFARQAFDEITQPDLPSWNAIIHAN 136
Query: 364 IRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVD---AGVKPNEI 420
+ GMI AR+LF+ M +++V SWS MI GY + AL LF + + ++PNE
Sbjct: 137 AKAGMIHIARKLFDQMPEKNVISWSCMIHGYVSCGEYKAALSLFRSLQTLEGSQLRPNEF 196
Query: 421 TMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHI 480
TM SV A A G L+ G+W H Y+ + ++ L ++IDMYAKCGSI A +F ++
Sbjct: 197 TMSSVLSACARLGALQHGKWVHAYIDKTGMKIDVVLGTSLIDMYAKCGSIERAKCIFDNL 256
Query: 481 RDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDL 540
V W+A+I +MHG + L++++ + ++ N++TF+ VL C H GLV
Sbjct: 257 GPEK-DVMAWSAMITAFSMHGLSEECLELFARMVNDGVRPNAVTFVAVLCACVHGGLVSE 315
Query: 541 GERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAAS 600
G YFK M + Y V P ++HYGCMVDL RAG++EDA V++SMPM+ DV+IWG LL +
Sbjct: 316 GNEYFKRMMNEYGVSPMIQHYGCMVDLYSRAGRIEDAWNVVKSMPMEPDVMIWGALLNGA 375
Query: 601 RIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPG 660
RIHG+VE E A L L P++ + VLLSN+YA GRW + +R M G+K+LPG
Sbjct: 376 RIHGDVETCEIAITKLLELDPANSSAYVLLSNVYAKLGRWREVRHLRDLMEVRGIKKLPG 435
Query: 661 FSGV 664
S V
Sbjct: 436 CSLV 439
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 110/378 (29%), Positives = 188/378 (49%), Gaps = 44/378 (11%)
Query: 132 QNDCWREALEVFRDMRILGVIPNEVTLASVISS--SVHLGGIWECRMLHGLVIKLMIDGF 189
QN + AL ++ MR+ V+P+ T ++ S + H G R LH ++ L +
Sbjct: 40 QNPAFPPALSLYLRMRLHAVLPDLHTFPFLLQSINTPHRG-----RQLHAQILLLGLAND 94
Query: 190 VIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPS 249
+ T+L+NMY C + AR FDE+ + ++ SWN +++ AKAG++ +AR+LF+++P
Sbjct: 95 PFVQTSLINMYSSCGTPTFARQAFDEITQPDLPSWNAIIHANAKAGMIHIARKLFDQMPE 154
Query: 250 KDVVSWGTMIDGYLQVERLSEALTMYRAMLC---DGIAPNDVMIVDLISACGRAMAFGEG 306
K+V+SW MI GY+ AL+++R++ + PN+ + ++SAC R A G
Sbjct: 155 KNVISWSCMIHGYVSCGEYKAALSLFRSLQTLEGSQLRPNEFTMSSVLSACARLGALQHG 214
Query: 307 LQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFE-LGIKDHIASWNALIAGFIR 365
+H+ I K G + ++I YA CG I A+ F+ LG + + +W+A+I F
Sbjct: 215 KWVHAYIDKTGMKIDVVLGTSLIDMYAKCGSIERAKCIFDNLGPEKDVMAWSAMITAFSM 274
Query: 366 NGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSV 425
+G+ E+ LELF MV+ GV+PN +T V+V
Sbjct: 275 HGLSEE-------------------------------CLELFARMVNDGVRPNAVTFVAV 303
Query: 426 FCAIASSGTLKEGRWAHEYVLNN-SITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRT 484
CA G + EG + ++N ++ ++D+Y++ G I A+ V +
Sbjct: 304 LCACVHGGLVSEGNEYFKRMMNEYGVSPMIQHYGCMVDLYSRAGRIEDAWNVVKSM-PME 362
Query: 485 TSVSPWNAIICGLAMHGD 502
V W A++ G +HGD
Sbjct: 363 PDVMIWGALLNGARIHGD 380
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 96/358 (26%), Positives = 172/358 (48%), Gaps = 66/358 (18%)
Query: 41 QGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYI 100
+G+Q+H+ I GL ++ F+Q SLIN+Y+ CG + A+ FD + D + N +I
Sbjct: 78 RGRQLHAQILLLGLANDPFVQTSLINMYSSCGTPTFARQAFDEITQPDLPSWNAIIHANA 137
Query: 101 RNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL---GVIPNEVT 157
+ ++ AR++FD+ P K +S++ MI G+ ++ AL +FR ++ L + PNE T
Sbjct: 138 KAGMIHIARKLFDQMPEKNVISWSCMIHGYVSCGEYKAALSLFRSLQTLEGSQLRPNEFT 197
Query: 158 LASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEM- 216
++SV+S+ LG + + +H + K + V++ T+L++MY C S+ A+ +FD +
Sbjct: 198 MSSVLSACARLGALQHGKWVHAYIDKTGMKIDVVLGTSLIDMYAKCGSIERAKCIFDNLG 257
Query: 217 KERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYR 276
E+++++W+ M+ F+ GL E ELF R
Sbjct: 258 PEKDVMAWSAMITAFSMHGLSEECLELFAR------------------------------ 287
Query: 277 AMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACG 336
M+ DG+ PN V V ++ AC +H +V G + +
Sbjct: 288 -MVNDGVRPNAVTFVAVLCAC-----------VHGGLVSEGNEYFK-------------- 321
Query: 337 RINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ-KRDVYSWSAMISG 393
R+ E G+ I + ++ + R G IEDA + +M + DV W A+++G
Sbjct: 322 -----RMMNEYGVSPMIQHYGCMVDLYSRAGRIEDAWNVVKSMPMEPDVMIWGALLNG 374
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 114/242 (47%), Gaps = 42/242 (17%)
Query: 3 LDHFHSVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQN 62
L F S+ + + L+ +++ ++ S L C+ A+ G+ +H+ I K+G++ + +
Sbjct: 177 LSLFRSLQTLEGSQLRPNEFTMS--SVLSACARLGALQHGKWVHAYIDKTGMKIDVVLGT 234
Query: 63 SLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVS 122
SLI++YAKCG I +AK +FD+ P K ++
Sbjct: 235 SLIDMYAKCGSIERAKCIFDNLG------------------------------PEKDVMA 264
Query: 123 YTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWEC-----RML 177
+++MI F+ + E LE+F M GV PN VT +V+ + VH G + E RM+
Sbjct: 265 WSAMITAFSMHGLSEECLELFARMVNDGVRPNAVTFVAVLCACVHGGLVSEGNEYFKRMM 324
Query: 178 HGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMK-ERNIVSWNVMLNGFAKAGL 236
+ + MI + ++++Y + +A ++ M E +++ W +LNG G
Sbjct: 325 NEYGVSPMIQHY----GCMVDLYSRAGRIEDAWNVVKSMPMEPDVMIWGALLNGARIHGD 380
Query: 237 VE 238
VE
Sbjct: 381 VE 382
>gi|147853412|emb|CAN82303.1| hypothetical protein VITISV_013933 [Vitis vinifera]
Length = 549
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 173/571 (30%), Positives = 287/571 (50%), Gaps = 74/571 (12%)
Query: 99 YIRNDRLNDAREVF-DKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVT 157
Y + +++N A +F D T ++ ++I GF N E E ++ MR GV+P++ T
Sbjct: 2 YSKCNQMNFALSIFSDPTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVMPDKFT 61
Query: 158 LASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMK 217
I + + + E + +HGL+ K ++ V I + L+N Y
Sbjct: 62 FPCAIKACL---DVLEIKKIHGLLFKFGLELDVFIGSALVNCYL---------------- 102
Query: 218 ERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRA 277
K GL+E A+ FE +P +DVV W M++GY Q+ + L +R
Sbjct: 103 ---------------KFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQFEMVLETFRR 147
Query: 278 MLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGR 337
M + + P+ + ++S G IH +K G+D + ++I Y C
Sbjct: 148 MNDESVVPSRFTVTGILSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNSLIDMYGKCK- 206
Query: 338 INLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQN 397
IEDA ++F M+++D++SW+++ S + Q
Sbjct: 207 ------------------------------CIEDALEIFEMMREKDIFSWNSIXSVHEQC 236
Query: 398 EQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDN-- 455
+ L L M+ AG++P+ +T+ +V A + L GR H Y++ + + +
Sbjct: 237 GDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDI 296
Query: 456 ----LSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYS 511
L A+IDMYAKCGS+ A VF + ++ V+ WN +I G MHG N L+++S
Sbjct: 297 DDVLLKNAVIDMYAKCGSMRDAHLVFERMXNK--DVASWNIMIMGYGMHGYGNEALEMFS 354
Query: 512 DLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRA 571
+ + +K + +TF+GVLS C HAG V G + MKS Y+V P ++HY C++D+LGRA
Sbjct: 355 RMCEVQLKPDEVTFVGVLSACSHAGFVSQGRNFLAQMKSKYDVAPTIEHYTCVIDMLGRA 414
Query: 572 GQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLS 631
GQL++A E+ +MP++A+ V+W LLAA R+H + + E AA+ + L+P H S VL+S
Sbjct: 415 GQLDEAYELALTMPIEANPVVWRALLAACRLHKHAVLAEVAAQRVFELEPEHCGSYVLMS 474
Query: 632 NIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
N+Y GR+E+ +R MR +++ PG S
Sbjct: 475 NVYGAVGRYEEVLEVRHTMRQQNVRKTPGCS 505
Score = 152 bits (384), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 123/485 (25%), Positives = 207/485 (42%), Gaps = 104/485 (21%)
Query: 29 ALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLD 88
A++ C + V + ++IH L+FK GLE + FI ++L+N Y K GL+ A+
Sbjct: 65 AIKAC---LDVLEIKKIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQV--------- 112
Query: 89 PVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRI 148
F++ PI+ V + +M+ G+AQ + LE FR M
Sbjct: 113 ----------------------AFEELPIRDVVLWNAMVNGYAQIGQFEMVLETFRRMND 150
Query: 149 LGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVE 208
V+P+ T+ ++S +G + R++HG +K+ D V +S +L++MY C + +
Sbjct: 151 ESVVPSRFTVTGILSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIED 210
Query: 209 ARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERL 268
A +F+ M+E++I SWN + + + G + L +R
Sbjct: 211 ALEIFEMMREKDIFSWNSIXSVHEQCGDHDGTLRLLDR---------------------- 248
Query: 269 SEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIV-----KAGFDCYD- 322
ML GI P+ V + ++ AC A G +IH ++ K G D D
Sbjct: 249 ---------MLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDV 299
Query: 323 FIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKR 382
++ +I YA CG + A L FE +ASWN +I G+ GM
Sbjct: 300 LLKNAVIDMYAKCGSMRDAHLVFERMXNKDVASWNIMIMGY---GM-------------- 342
Query: 383 DVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGR-WA 441
GY N ALE+F M + +KP+E+T V V A + +G + +GR +
Sbjct: 343 ---------HGYG-----NEALEMFSRMCEVQLKPDEVTFVGVLSACSHAGFVSQGRNFL 388
Query: 442 HEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHG 501
+ + +IDM + G ++ A+E+ + V W A++ +H
Sbjct: 389 AQMKSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIEANPVV-WRALLAACRLHK 447
Query: 502 DANLT 506
A L
Sbjct: 448 HAVLA 452
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 110/266 (41%), Gaps = 42/266 (15%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESN------TFIQNSLINLYAKCGLISQA 77
+ + + L CS A+ G++IH + SGL + ++N++I++YAKCG
Sbjct: 259 VTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCG----- 313
Query: 78 KSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWR 137
+ DA VF++ K S+ MIMG+ +
Sbjct: 314 --------------------------SMRDAHLVFERMXNKDVASWNIMIMGYGMHGYGN 347
Query: 138 EALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECR-MLHGLVIKLMIDGFVIISTNL 196
EALE+F M + + P+EVT V+S+ H G + + R L + K + + T +
Sbjct: 348 EALEMFSRMCEVQLKPDEVTFVGVLSACSHAGFVSQGRNFLAQMKSKYDVAPTIEHYTCV 407
Query: 197 LNMYCVCSSLVEARSLFDEMK-ERNIVSWNVMLNG---FAKAGLVELARELFERIPSKDV 252
++M L EA L M E N V W +L A L E+A + + +
Sbjct: 408 IDMLGRAGQLDEAYELALTMPIEANPVVWRALLAACRLHKHAVLAEVAAQRVFELEPEHC 467
Query: 253 VSWGTMIDGYLQVERLSEALTMYRAM 278
S+ M + Y V R E L + M
Sbjct: 468 GSYVLMSNVYGAVGRYEEVLEVRHTM 493
Score = 43.5 bits (101), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 68/151 (45%), Gaps = 17/151 (11%)
Query: 463 MYAKCGSINTAFEVFYHIRDRTTSVS--PWNAIICGLAMHGDANLTLKIYSDLEKRNIKL 520
MY+KC +N A +F D T ++ +NAII G +G + Y + +
Sbjct: 1 MYSKCNQMNFALSIF---SDPTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVMP 57
Query: 521 NSITFIGVLSTCCHAGLVDLGE-RYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEE 579
+ TF + C +D+ E + + + +E D+ +V+ + G +E A+
Sbjct: 58 DKFTFPCAIKAC-----LDVLEIKKIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQV 112
Query: 580 VIRSMPMKADVVIWGTLLAASRIHGNVEVGE 610
+P++ DVV+W + ++G ++G+
Sbjct: 113 AFEELPIR-DVVLWNAM-----VNGYAQIGQ 137
>gi|224058579|ref|XP_002299552.1| predicted protein [Populus trichocarpa]
gi|222846810|gb|EEE84357.1| predicted protein [Populus trichocarpa]
Length = 505
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 159/432 (36%), Positives = 241/432 (55%), Gaps = 14/432 (3%)
Query: 237 VELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDG-IAPNDVMIVDLIS 295
+ A+ +F + + ++ MI GY Q E+ AL+++ +MLC+ N + ++
Sbjct: 75 INYAQSIFNFDKNPNTFAYNVMIRGYAQREKPENALSLFYSMLCNANSGQNKLTFPFVLK 134
Query: 296 ACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIAS 355
AC + A EG Q+H ++ K G F+Q ++I Y++CG I A F + S
Sbjct: 135 ACSQVRAIEEGKQVHGLVFKHGLSEDLFVQNSLISMYSSCGLIGFACQVFNKIDDPDVVS 194
Query: 356 WNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGV 415
WN++I+G + G +E+ +Q+F+ M KR + +W+ +I GY + A ELF M
Sbjct: 195 WNSMISGLVDLGFVEEGKQMFDRMSKRSLVTWNCLIDGYVKAGLLMEARELFDQM----- 249
Query: 416 KPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFE 475
TMVSV A + G L++G W ++ N I +N L A+++M+AKCGSI A
Sbjct: 250 ---RFTMVSVLTACSYLGALEQGEWMQAHIEKNGIDVNSVLGTALVEMFAKCGSIERALS 306
Query: 476 VFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHA 535
VF I +R V WN+II LA HG I+SD+ + N L+ I F+G+LS C H
Sbjct: 307 VFKSIEER--DVGAWNSIIHKLAAHGHGQEAFAIFSDMLRSNTLLDGIIFLGLLSVCRHL 364
Query: 536 GLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRS---MPMKADVVI 592
GLVD G+R+F+ M Y + P ++HYGCMVDLL A LE+A ++I S MK+ V +
Sbjct: 365 GLVDEGKRFFQLMSEEYGLVPKVEHYGCMVDLLCHADLLEEARDLIDSSHASQMKSSVPM 424
Query: 593 WGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRD 652
WG LL S N+ +GE AAK L L P G +LSN+Y+ AG +E A +R EM+
Sbjct: 425 WGALLGVSCQLKNIVMGEYAAKHLLQLDPFDGNCYTVLSNLYSAAGLYEKAIEVRNEMKK 484
Query: 653 CGMKRLPGFSGV 664
G++++PG S +
Sbjct: 485 QGLEKIPGSSSM 496
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 140/262 (53%), Gaps = 13/262 (4%)
Query: 8 SVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINL 67
S+F S N + +L L+ CS A+ +G+Q+H L+FK GL + F+QNSLI++
Sbjct: 111 SLFYSMLCNANSGQNKLTFPFVLKACSQVRAIEEGKQVHGLVFKHGLSEDLFVQNSLISM 170
Query: 68 YAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMI 127
Y+ CGLI A +F+ D V+ N MISG + + + +++FD+ + V++ +I
Sbjct: 171 YSSCGLIGFACQVFNKIDDPDVVSWNSMISGLVDLGFVEEGKQMFDRMSKRSLVTWNCLI 230
Query: 128 MGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMID 187
G+ + EA E+F MR T+ SV+++ +LG + + + + K ID
Sbjct: 231 DGYVKAGLLMEARELFDQMRF--------TMVSVLTACSYLGALEQGEWMQAHIEKNGID 282
Query: 188 GFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERI 247
++ T L+ M+ C S+ A S+F ++ER++ +WN +++ A G + A +F
Sbjct: 283 VNSVLGTALVEMFAKCGSIERALSVFKSIEERDVGAWNSIIHKLAAHGHGQEAFAIF--- 339
Query: 248 PSKDVVSWGTMIDGYLQVERLS 269
D++ T++DG + + LS
Sbjct: 340 --SDMLRSNTLLDGIIFLGLLS 359
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 138/274 (50%), Gaps = 11/274 (4%)
Query: 112 FDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRI-LGVIPNEVTLASVISSSVHLGG 170
FDK P +Y MI G+AQ + AL +F M N++T V+ + +
Sbjct: 84 FDKNP--NTFAYNVMIRGYAQREKPENALSLFYSMLCNANSGQNKLTFPFVLKACSQVRA 141
Query: 171 IWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNG 230
I E + +HGLV K + + + +L++MY C + A +F+++ + ++VSWN M++G
Sbjct: 142 IEEGKQVHGLVFKHGLSEDLFVQNSLISMYSSCGLIGFACQVFNKIDDPDVVSWNSMISG 201
Query: 231 FAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMI 290
G VE +++F+R+ + +V+W +IDGY++ L EA ++ M +
Sbjct: 202 LVDLGFVEEGKQMFDRMSKRSLVTWNCLIDGYVKAGLLMEARELFDQM--------RFTM 253
Query: 291 VDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIK 350
V +++AC A +G + + I K G D + ++ +A CG I A F+ +
Sbjct: 254 VSVLTACSYLGALEQGEWMQAHIEKNGIDVNSVLGTALVEMFAKCGSIERALSVFKSIEE 313
Query: 351 DHIASWNALIAGFIRNGMIEDARQLFNNMQKRDV 384
+ +WN++I +G ++A +F++M + +
Sbjct: 314 RDVGAWNSIIHKLAAHGHGQEAFAIFSDMLRSNT 347
>gi|15226150|ref|NP_180924.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75101011|sp|P93005.1|PP181_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g33680
gi|1707007|gb|AAC69139.1| hypothetical protein [Arabidopsis thaliana]
gi|330253774|gb|AEC08868.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 727
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 208/684 (30%), Positives = 327/684 (47%), Gaps = 81/684 (11%)
Query: 25 ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSC 84
L+ L + S + G+ +H I ++G + N L+N YAKCG +++A S+F++
Sbjct: 16 TLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAI 75
Query: 85 STLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFR 144
D V+ N +I+GY +N ++ SYT M ++FR
Sbjct: 76 ICKDVVSWNSLITGYSQNGGISS--------------SYTVM--------------QLFR 107
Query: 145 DMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCS 204
+MR ++PN TLA + + L R H LV+K+ G + + T+L+ MYC
Sbjct: 108 EMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAG 167
Query: 205 SLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELF-----ERIPSKD-------- 251
+ + +F M ERN +W+ M++G+A G VE A ++F E+ D
Sbjct: 168 LVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAV 227
Query: 252 --------VVSWG------TMIDGYLQVERLSEAL-TMYRAMLCDGIAPNDVMI---VDL 293
V G T+ +G L LS AL TMY C+ + M D
Sbjct: 228 LSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSK--CESLNEACKMFDSSGDR 285
Query: 294 ISACGRAMAFG--------EGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRI------- 338
S AM G E +++ S + AG ++ TI+ AC I
Sbjct: 286 NSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEY---TIVGVLNACSDICYLEEGK 342
Query: 339 NLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNE 398
L +LG + H+ + AL+ + + G + DAR+ F+ +Q+RDV W+++ISGY QN
Sbjct: 343 QLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNS 402
Query: 399 QPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSA 458
AL L+ M AG+ PN+ TM SV A +S TL+ G+ H + + + L + +
Sbjct: 403 DNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGS 462
Query: 459 AIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNI 518
A+ MY+KCGS+ VF R V WNA+I GL+ +G + L+++ ++ +
Sbjct: 463 ALSTMYSKCGSLEDGNLVFR--RTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGM 520
Query: 519 KLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAE 578
+ + +TF+ ++S C H G V+ G YF M ++P + HY CMVDLL RAGQL++A+
Sbjct: 521 EPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAK 580
Query: 579 EVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAG 638
E I S + + +W LL+A + HG E+G A + L L + V LS IY G
Sbjct: 581 EFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSRESSTYVQLSGIYTALG 640
Query: 639 RWEDAFSIRKEMRDCGMKRLPGFS 662
R D + K MR G+ + G S
Sbjct: 641 RMRDVERVWKHMRANGVSKEVGCS 664
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 121/500 (24%), Positives = 213/500 (42%), Gaps = 99/500 (19%)
Query: 8 SVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINL 67
++F +K +SDY + L +A I V G+QIH + K+GL + N+L+ +
Sbjct: 208 NLFLREKEEGSDSDY--VFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTM 265
Query: 68 YAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMI 127
Y+KC +++A MFDS + + + M++GY
Sbjct: 266 YSKCESLNEACKMFDSSGDRNSITWSAMVTGY---------------------------- 297
Query: 128 MGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMID 187
+QN EA+++F M G+ P+E T+ V+++ + + E + LH ++KL +
Sbjct: 298 ---SQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFE 354
Query: 188 GFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERI 247
+ +T L++MY L +AR FD ++ER++ W
Sbjct: 355 RHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWT---------------------- 392
Query: 248 PSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGL 307
++I GY+Q EAL +YR M GI PND + ++ AC G
Sbjct: 393 ---------SLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGK 443
Query: 308 QIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNG 367
Q+H +K GF I + + Y+ CG + L F + SWNA+I+G NG
Sbjct: 444 QVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNG 503
Query: 368 MIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFC 427
Q + ALELF M+ G++P+++T V++
Sbjct: 504 -------------------------------QGDEALELFEEMLAEGMEPDDVTFVNIIS 532
Query: 428 AIASSGTLKEGRWAHEYVLNNSITLNDNLS--AAIIDMYAKCGSINTAFEVFYHIRDRTT 485
A + G ++ G W + ++++ I L+ + A ++D+ ++ G + A E F +
Sbjct: 533 ACSHKGFVERG-WFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKE-FIESANIDH 590
Query: 486 SVSPWNAIICGLAMHGDANL 505
+ W ++ HG L
Sbjct: 591 GLCLWRILLSACKNHGKCEL 610
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 115/496 (23%), Positives = 226/496 (45%), Gaps = 58/496 (11%)
Query: 153 PNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSL 212
P+ TL ++ + R +HG +I+ + + L+N Y C L +A S+
Sbjct: 12 PHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSI 71
Query: 213 FDEMKERNIVSWNVMLNGFAKAGLVE---LARELFERIPSKDVVSWGTMIDGYLQVERLS 269
F+ + +++VSWN ++ G+++ G + +LF + ++D++ + G + E
Sbjct: 72 FNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSL 131
Query: 270 EALTMYR---AMLCDGIAPNDVMI-VDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQ 325
++ T+ R A++ + D+ + L+ +A +GL++ + + + +
Sbjct: 132 QSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERN----TYTW 187
Query: 326 ATIIHFYAACGRINLARLQFEL-------------------------------------- 347
+T++ YA GR+ A F L
Sbjct: 188 STMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCIT 247
Query: 348 ---GIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMAL 404
G+ +A NAL+ + + + +A ++F++ R+ +WSAM++GY+QN + A+
Sbjct: 248 IKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAV 307
Query: 405 ELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMY 464
+LF M AG+KP+E T+V V A + L+EG+ H ++L + + A++DMY
Sbjct: 308 KLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMY 367
Query: 465 AKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSIT 524
AK G + A + F +++R V+ W ++I G + D L +Y ++ I N T
Sbjct: 368 AKAGCLADARKGFDCLQER--DVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPT 425
Query: 525 FIGVLSTCCHAGLVDLGER-YFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRS 583
VL C ++LG++ + ++K + +E + + + + G LED V R
Sbjct: 426 MASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIG--SALSTMYSKCGSLEDGNLVFRR 483
Query: 584 MPMKADVVIWGTLLAA 599
P K DVV W +++
Sbjct: 484 TPNK-DVVSWNAMISG 498
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/199 (20%), Positives = 85/199 (42%), Gaps = 13/199 (6%)
Query: 415 VKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAF 474
+ P+ T++ + L GR H ++ + + +++ YAKCG + A
Sbjct: 10 LNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAH 69
Query: 475 EVFYHIRDRTTSVSPWNAIICGLAMHG---DANLTLKIYSDLEKRNIKLNSITFIGVLST 531
+F I + V WN++I G + +G + ++++ ++ ++I N+ T G+
Sbjct: 70 SIFNAIICK--DVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKA 127
Query: 532 CCHAGLVDLGERYFK---SMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKA 588
+G + M S ++ D +V + +AG +ED +V MP +
Sbjct: 128 ESSLQSSTVGRQAHALVVKMSSFGDIYVDTS----LVGMYCKAGLVEDGLKVFAYMPER- 182
Query: 589 DVVIWGTLLAASRIHGNVE 607
+ W T+++ G VE
Sbjct: 183 NTYTWSTMVSGYATRGRVE 201
>gi|242036805|ref|XP_002465797.1| hypothetical protein SORBIDRAFT_01g045970 [Sorghum bicolor]
gi|241919651|gb|EER92795.1| hypothetical protein SORBIDRAFT_01g045970 [Sorghum bicolor]
Length = 531
Score = 293 bits (751), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 168/460 (36%), Positives = 249/460 (54%), Gaps = 41/460 (8%)
Query: 240 ARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAML------CDGIAPNDVMIVDL 293
AR +F+RIP D + T+I G +A+++Y M G+ P+ +
Sbjct: 61 ARLVFDRIPHPDRFMYNTLIRGAAHSYAPRDAVSIYARMARHSAGCGGGVRPDKRTFPFV 120
Query: 294 ISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHI 353
+ AC A G Q+H+ +VKAG + F++ +I +A CG + A F+ ++
Sbjct: 121 LRACAAMGASETGAQVHAHVVKAGCESDAFVRNALIGMHATCGDLGAAAALFDGEAREDA 180
Query: 354 ASWNALIAGFIRNGMI-------------------------------EDARQLFNNMQKR 382
+W+A+I+GF R G I AR+LF+ R
Sbjct: 181 VAWSAMISGFARRGDIGAARELFDESPVKDLVSWNVMITAYAKLGDMAPARELFDGAPDR 240
Query: 383 DVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAH 442
DV SW+AMISGY + A+ELF M G KP+ +TM+S+ A A SG + GR H
Sbjct: 241 DVVSWNAMISGYVRCGSHKQAMELFEQMQAMGEKPDTVTMLSLLSACADSGDMDAGRRLH 300
Query: 443 EYVLN--NSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMH 500
++ + I + L A+IDMYAKCGS+ +A EVF+ ++D+ +VS WN+II GLA+H
Sbjct: 301 RFLSGRFSRIGPSTVLGNALIDMYAKCGSMTSALEVFWLMQDK--NVSTWNSIIGGLALH 358
Query: 501 GDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKH 560
G + ++ + + N+K + ITF+ VL C H G+VD G YF M+ Y +EP++KH
Sbjct: 359 GHVTEAIDVFQKMLQGNVKPDEITFVAVLVACSHGGMVDKGHEYFNLMQQRYMIEPNVKH 418
Query: 561 YGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQ 620
YGCMVD+L RAG L++A E I +M ++ + VIW TLL A RIHG +E+ E A + L +
Sbjct: 419 YGCMVDMLSRAGLLKEAFEFIGTMKIEPNPVIWRTLLGACRIHGELELAEHANQELLKAR 478
Query: 621 PSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPG 660
VLLSNIYA G W + ++RK M D G+ + G
Sbjct: 479 SDASGDFVLLSNIYASVGEWLGSENMRKLMDDSGVNKEAG 518
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 107/451 (23%), Positives = 188/451 (41%), Gaps = 78/451 (17%)
Query: 108 AREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL------GVIPNEVTLASV 161
AR VFD+ P Y ++I G A + R+A+ ++ M GV P++ T V
Sbjct: 61 ARLVFDRIPHPDRFMYNTLIRGAAHSYAPRDAVSIYARMARHSAGCGGGVRPDKRTFPFV 120
Query: 162 ISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNI 221
+ + +G +H V+K + + L+ M+ C L A +LFD +
Sbjct: 121 LRACAAMGASETGAQVHAHVVKAGCESDAFVRNALIGMHATCGDLGAAAALFDGEAREDA 180
Query: 222 VSWNVMLNGFAKAGLVELARELFER-------------------------------IPSK 250
V+W+ M++GFA+ G + ARELF+ P +
Sbjct: 181 VAWSAMISGFARRGDIGAARELFDESPVKDLVSWNVMITAYAKLGDMAPARELFDGAPDR 240
Query: 251 DVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIH 310
DVVSW MI GY++ +A+ ++ M G P+ V ++ L+SAC + G ++H
Sbjct: 241 DVVSWNAMISGYVRCGSHKQAMELFEQMQAMGEKPDTVTMLSLLSACADSGDMDAGRRLH 300
Query: 311 SIIVK--AGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGM 368
+ + + +I YA CG + A F L ++++WN++I G +G
Sbjct: 301 RFLSGRFSRIGPSTVLGNALIDMYAKCGSMTSALEVFWLMQDKNVSTWNSIIGGLALHGH 360
Query: 369 IEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCA 428
+ + A+++F M+ VKP+EIT V+V A
Sbjct: 361 VTE-------------------------------AIDVFQKMLQGNVKPDEITFVAVLVA 389
Query: 429 IASSGTLKEGRWAHEY--VLNNSITLNDNLS--AAIIDMYAKCGSINTAFEVFYHIRDRT 484
+ G + +G HEY ++ + N+ ++DM ++ G + AFE ++
Sbjct: 390 CSHGGMVDKG---HEYFNLMQQRYMIEPNVKHYGCMVDMLSRAGLLKEAFEFIGTMKIEP 446
Query: 485 TSVSPWNAIICGLAMHGDANLTLKIYSDLEK 515
V W ++ +HG+ L +L K
Sbjct: 447 NPVI-WRTLLGACRIHGELELAEHANQELLK 476
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 133/256 (51%), Gaps = 33/256 (12%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
LR C+A A G Q+H+ + K+G ES+ F++N+LI ++A CG + A ++FD + D
Sbjct: 121 LRACAAMGASETGAQVHAHVVKAGCESDAFVRNALIGMHATCGDLGAAAALFDGEAREDA 180
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIK------------------------------- 118
VA + MISG+ R + ARE+FD++P+K
Sbjct: 181 VAWSAMISGFARRGDIGAARELFDESPVKDLVSWNVMITAYAKLGDMAPARELFDGAPDR 240
Query: 119 CCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLH 178
VS+ +MI G+ + ++A+E+F M+ +G P+ VT+ S++S+ G + R LH
Sbjct: 241 DVVSWNAMISGYVRCGSHKQAMELFEQMQAMGEKPDTVTMLSLLSACADSGDMDAGRRLH 300
Query: 179 GLVIKLM--IDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGL 236
+ I ++ L++MY C S+ A +F M+++N+ +WN ++ G A G
Sbjct: 301 RFLSGRFSRIGPSTVLGNALIDMYAKCGSMTSALEVFWLMQDKNVSTWNSIIGGLALHGH 360
Query: 237 VELARELFERIPSKDV 252
V A ++F+++ +V
Sbjct: 361 VTEAIDVFQKMLQGNV 376
>gi|356554981|ref|XP_003545819.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Glycine max]
Length = 705
Score = 293 bits (751), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 181/640 (28%), Positives = 307/640 (47%), Gaps = 100/640 (15%)
Query: 28 SALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTL 87
S + C G+ IH+ + K+GL + + +SL+ +Y KC +A +F+
Sbjct: 111 SVFKACGGLHRYVLGKMIHTCLIKTGLMMDIVVGSSLVGMYGKCNAFEKAIWLFNEMPEK 170
Query: 88 DPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMR 147
D N +IS Y Q+ +++ALE F MR
Sbjct: 171 DVACWNTVISCYY-------------------------------QSGNFKDALEYFGLMR 199
Query: 148 ILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIK--LMIDGFVIISTNLLNMYCVCSS 205
G PN VT+ + ISS L + +H +I ++D F IS+ L++MY
Sbjct: 200 RFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGFLLDSF--ISSALVDMY----- 252
Query: 206 LVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQV 265
K G +E+A E+FE++P K VV+W +MI GY
Sbjct: 253 --------------------------GKCGHLEMAIEIFEQMPKKTVVAWNSMISGYGLK 286
Query: 266 ERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQ 325
+ + +++ M +G+ P + LI C R+ EG +H ++ F+
Sbjct: 287 GDIISCIQLFKRMYNEGVKPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQPDVFVN 346
Query: 326 ATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVY 385
++++ Y CG++ LA ++F + K V
Sbjct: 347 SSLMDLYFKCGKVELAE-------------------------------KIFKLIPKSKVV 375
Query: 386 SWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYV 445
SW+ MISGY + AL LF M + V+ + IT SV A + L++G+ H +
Sbjct: 376 SWNVMISGYVAEGKLFEALGLFSEMRKSYVESDAITFTSVLTACSQLAALEKGKEIHNLI 435
Query: 446 LNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANL 505
+ + N+ + A++DMYAKCG+++ AF VF + R + W ++I HG A
Sbjct: 436 IEKKLDNNEVVMGALLDMYAKCGAVDEAFSVFKCLPKR--DLVSWTSMITAYGSHGHAYG 493
Query: 506 TLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMV 565
L++++++ + N+K + + F+ +LS C HAGLVD G YF M +VY + P ++HY C++
Sbjct: 494 ALELFAEMLQSNVKPDRVAFLAILSACGHAGLVDEGCYYFNQMINVYGIIPRVEHYSCLI 553
Query: 566 DLLGRAGQLEDAEEVIRSMP-MKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHG 624
DLLGRAG+L +A E+++ P ++ DV + TL +A R+H N+++G A++L P
Sbjct: 554 DLLGRAGRLHEAYEILQQNPEIRDDVELLSTLFSACRLHRNIDLGAEIARTLIDKDPDDS 613
Query: 625 PSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
+ +LLSN+YA A +W++ +R +M++ G+K+ PG S +
Sbjct: 614 STYILLSNMYASAHKWDEVRVVRSKMKELGLKKNPGCSWI 653
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 157/624 (25%), Positives = 272/624 (43%), Gaps = 117/624 (18%)
Query: 26 LVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCS 85
L+ LR C ++ QG+ IH + GL+++ F+ +LIN Y C L AK
Sbjct: 6 LLPLLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKTLINQYLSCHLYDHAKC------ 59
Query: 86 TLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVS-YTSMIMGFAQNDCWREALEVFR 144
VFD C +S + ++ G+ +N + EALE+F
Sbjct: 60 -------------------------VFDNMENPCEISLWNGLMAGYTKNYMYVEALELFE 94
Query: 145 DMRILGVI-PNEVTLASVISSSVHLGGIWECRMLHGLVIK--LMIDGFVIISTNLLNMYC 201
+ + P+ T SV + L +M+H +IK LM+D +++ ++L+ MY
Sbjct: 95 KLLHYPYLKPDSYTYPSVFKACGGLHRYVLGKMIHTCLIKTGLMMD--IVVGSSLVGMYG 152
Query: 202 VCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDG 261
C++ +A LF+EM E+++ WN T+I
Sbjct: 153 KCNAFEKAIWLFNEMPEKDVACWN-------------------------------TVISC 181
Query: 262 YLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCY 321
Y Q +AL + M G PN V I IS+C R + G++IH ++ +GF
Sbjct: 182 YYQSGNFKDALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGFLLD 241
Query: 322 DFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQK 381
FI + ++ Y CG + +A FE K + +WN++I+G+ G
Sbjct: 242 SFISSALVDMYGKCGHLEMAIEIFEQMPKKTVVAWNSMISGYGLKG-------------- 287
Query: 382 RDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWA 441
D+ S ++LF M + GVKP T+ S+ + S L EG++
Sbjct: 288 -DIIS----------------CIQLFKRMYNEGVKPTLTTLSSLIMVCSRSARLLEGKFV 330
Query: 442 HEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHG 501
H Y + N I + ++++++D+Y KCG + A ++F I + V WN +I G G
Sbjct: 331 HGYTIRNRIQPDVFVNSSLMDLYFKCGKVELAEKIFKLI--PKSKVVSWNVMISGYVAEG 388
Query: 502 DANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYN--VEPDLK 559
L ++S++ K ++ ++ITF VL+ C ++ G K ++N +E L
Sbjct: 389 KLFEALGLFSEMRKSYVESDAITFTSVLTACSQLAALEKG-------KEIHNLIIEKKLD 441
Query: 560 H----YGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKS 615
+ G ++D+ + G +++A V + +P K D+V W +++ A HG+
Sbjct: 442 NNEVVMGALLDMYAKCGAVDEAFSVFKCLP-KRDLVSWTSMITAYGSHGHAYGALELFAE 500
Query: 616 LAGLQPSHGPSRVLLSNIYADAGR 639
+ LQ + P RV I + G
Sbjct: 501 M--LQSNVKPDRVAFLAILSACGH 522
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 103/488 (21%), Positives = 206/488 (42%), Gaps = 96/488 (19%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+ + +A+ C+ + +++G +IH + SG ++FI ++L+++Y KCG + A +F+
Sbjct: 208 VTITTAISSCARLLDLNRGMEIHEELINSGFLLDSFISSALVDMYGKCGHLEMAIEIFEQ 267
Query: 84 CSTLDPVACNIMISGY-IRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
VA N MISGY ++ D I C+ ++
Sbjct: 268 MPKKTVVAWNSMISGYGLKGD-------------IISCI-------------------QL 295
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
F+ M GV P TL+S+I + E + +HG I+ I V ++++L+++Y
Sbjct: 296 FKRMYNEGVKPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQPDVFVNSSLMDLYFK 355
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
C + A +F + + +VSWNVM++G+ G
Sbjct: 356 CGKVELAEKIFKLIPKSKVVSWNVMISGYVAEG--------------------------- 388
Query: 263 LQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD 322
+L EAL ++ M + + + +++AC + A +G +IH++I++ D +
Sbjct: 389 ----KLFEALGLFSEMRKSYVESDAITFTSVLTACSQLAALEKGKEIHNLIIEKKLDNNE 444
Query: 323 FIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKR 382
+ ++ YA CG ++ A F+ K + SW ++I
Sbjct: 445 VVMGALLDMYAKCGAVDEAFSVFKCLPKRDLVSWTSMI---------------------- 482
Query: 383 DVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAH 442
+ Y + ALELF M+ + VKP+ + +++ A +G + EG +
Sbjct: 483 ---------TAYGSHGHAYGALELFAEMLQSNVKPDRVAFLAILSACGHAGLVDEGCYYF 533
Query: 443 EYVLN-NSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHG 501
++N I + +ID+ + G ++ A+E+ + V + + +H
Sbjct: 534 NQMINVYGIIPRVEHYSCLIDLLGRAGRLHEAYEILQQNPEIRDDVELLSTLFSACRLHR 593
Query: 502 DANLTLKI 509
+ +L +I
Sbjct: 594 NIDLGAEI 601
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/390 (22%), Positives = 158/390 (40%), Gaps = 94/390 (24%)
Query: 25 ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSC 84
L S + CS + +G+ +H ++ ++ + F+ +SL++LY KCG + A+ +F
Sbjct: 310 TLSSLIMVCSRSARLLEGKFVHGYTIRNRIQPDVFVNSSLMDLYFKCGKVELAEKIFKLI 369
Query: 85 STLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFR 144
V+ N+MISGY+ +L EAL +F
Sbjct: 370 PKSKVVSWNVMISGYVAEGKL-------------------------------FEALGLFS 398
Query: 145 DMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCS 204
+MR V + +T SV+++ L + + + +H L+I+ +D ++ LL+MY C
Sbjct: 399 EMRKSYVESDAITFTSVLTACSQLAALEKGKEIHNLIIEKKLDNNEVVMGALLDMYAKCG 458
Query: 205 SLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQ 264
++ EA S+F + +R++VSW M+ + G A ELF
Sbjct: 459 AVDEAFSVFKCLPKRDLVSWTSMITAYGSHGHAYGALELFAE------------------ 500
Query: 265 VERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFI 324
ML + P+ V + ++SACG A EG CY F
Sbjct: 501 -------------MLQSNVKPDRVAFLAILSACGHAGLVDEG-------------CYYFN 534
Query: 325 QATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLF--NNMQKR 382
Q +I+ Y GI + ++ LI R G + +A ++ N +
Sbjct: 535 Q--MINVY---------------GIIPRVEHYSCLIDLLGRAGRLHEAYEILQQNPEIRD 577
Query: 383 DVYSWSAMISGYAQNEQPNMALELFHGMVD 412
DV S + S + ++ E+ ++D
Sbjct: 578 DVELLSTLFSACRLHRNIDLGAEIARTLID 607
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 76/165 (46%), Gaps = 32/165 (19%)
Query: 9 VFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLY 68
+F+ + + SD + S L CS A+ +G++IH+LI + L++N + +L+++Y
Sbjct: 396 LFSEMRKSYVESD-AITFTSVLTACSQLAALEKGKEIHNLIIEKKLDNNEVVMGALLDMY 454
Query: 69 AKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIM 128
AKCG + +A S VF P + VS+TSMI
Sbjct: 455 AKCGAVDEAFS-------------------------------VFKCLPKRDLVSWTSMIT 483
Query: 129 GFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWE 173
+ + ALE+F +M V P+ V +++S+ H G + E
Sbjct: 484 AYGSHGHAYGALELFAEMLQSNVKPDRVAFLAILSACGHAGLVDE 528
>gi|357466605|ref|XP_003603587.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492635|gb|AES73838.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 568
Score = 293 bits (751), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 152/441 (34%), Positives = 252/441 (57%), Gaps = 5/441 (1%)
Query: 227 MLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLC---DGI 283
ML+ G V A LF+++ ++ ++ +I Y S A++++ ML + +
Sbjct: 48 MLDSCDNLGHVSYATLLFKQLLHPNIFTYNAIIRTYAHNRHHSSAISVFVQMLTHSTNSV 107
Query: 284 APNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARL 343
P+ +I +C + G+Q+H ++ K G D + + +I Y G + A
Sbjct: 108 FPDKFTFPFVIKSCTGILCHRLGMQVHGLVYKFGADFHCITENALIDMYTKFGDLTNACK 167
Query: 344 QFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMA 403
FE + SWN+LI G+++ G + AR+LF++M R + SW+ MI+GY + A
Sbjct: 168 VFEEMSHRDVISWNSLIFGYVKLGQMNSARELFDDMPVRTIVSWTTMITGYGRMGCYGDA 227
Query: 404 LELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDM 463
L++F M G++P+EI++++V A A G L+ G+W H Y N + A+I+M
Sbjct: 228 LDVFREMQMVGIEPDEISIIAVLPACAQLGALEVGKWIHMYADKNGFLRKTGICNALIEM 287
Query: 464 YAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSI 523
YAKCG I+ A+ +F + ++ V W+ +I GLA HG ++++ ++ K + N I
Sbjct: 288 YAKCGCIDEAWNLFDQLVEK--DVISWSTMIGGLANHGKGYEAIQLFEEMCKVRVAPNEI 345
Query: 524 TFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRS 583
TF+GVL C H GL D G +YF M + Y++EP+++HYGC++DLLGR+G L A + I
Sbjct: 346 TFLGVLLACSHTGLWDEGLKYFDVMSASYHIEPEIEHYGCLIDLLGRSGCLGQALDTISK 405
Query: 584 MPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDA 643
MP+K D IW +LL++ RIH N+++ A K L L+P + VLL+N+YA+ G+WED
Sbjct: 406 MPIKPDSRIWNSLLSSCRIHRNLQIAVIAVKQLMELEPEESGNYVLLANMYAEHGKWEDV 465
Query: 644 FSIRKEMRDCGMKRLPGFSGV 664
+IRK +R+ +K+ PG S +
Sbjct: 466 SNIRKLIRNKRIKKTPGSSSI 486
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 125/482 (25%), Positives = 209/482 (43%), Gaps = 78/482 (16%)
Query: 27 VSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCST 86
+++L+ C ++Q ++IH+ + K L + F+ M DSC
Sbjct: 14 ITSLKNC---FKITQLKKIHAHVVKLSLSQSNFL----------------VTKMLDSCDN 54
Query: 87 LDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDM 146
L V+ ++ + + + +Y ++I +A N A+ VF M
Sbjct: 55 LGHVSYATLLFKQLLHPNI---------------FTYNAIIRTYAHNRHHSSAISVFVQM 99
Query: 147 ---RILGVIPNEVTLASVISSSVHLGGIWECRM---LHGLVIKLMIDGFVIISTNLLNMY 200
V P++ T VI S GI R+ +HGLV K D I L++MY
Sbjct: 100 LTHSTNSVFPDKFTFPFVIKSCT---GILCHRLGMQVHGLVYKFGADFHCITENALIDMY 156
Query: 201 CVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMID 260
L A +F+EM R+++SWN ++ G+ K G + ARELF+ +P + +VSW TMI
Sbjct: 157 TKFGDLTNACKVFEEMSHRDVISWNSLIFGYVKLGQMNSARELFDDMPVRTIVSWTTMIT 216
Query: 261 GYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDC 320
GY ++ +AL ++R M GI P+++ I+ ++ AC + A G IH K GF
Sbjct: 217 GYGRMGCYGDALDVFREMQMVGIEPDEISIIAVLPACAQLGALEVGKWIHMYADKNGFLR 276
Query: 321 YDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ 380
I +I YA CG I+ A F+ ++ + SW+ +I G +G
Sbjct: 277 KTGICNALIEMYAKCGCIDEAWNLFDQLVEKDVISWSTMIGGLANHG------------- 323
Query: 381 KRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRW 440
GY A++LF M V PNEIT + V A + +G EG
Sbjct: 324 -----------KGYE-------AIQLFEEMCKVRVAPNEITFLGVLLACSHTGLWDEGLK 365
Query: 441 AHEYVLNNSITLNDNLS--AAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLA 498
+ V++ S + + +ID+ + G + A + + + S WN+++
Sbjct: 366 YFD-VMSASYHIEPEIEHYGCLIDLLGRSGCLGQALDTISKMPIKPDS-RIWNSLLSSCR 423
Query: 499 MH 500
+H
Sbjct: 424 IH 425
>gi|449486805|ref|XP_004157408.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g33170-like [Cucumis sativus]
Length = 1573
Score = 293 bits (751), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 184/624 (29%), Positives = 301/624 (48%), Gaps = 98/624 (15%)
Query: 42 GQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIR 101
G+QIH+L+ KS + NSL+N+Y+K G++ A+ F + LD
Sbjct: 913 GEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELD------------- 959
Query: 102 NDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASV 161
+S+ +MI +AQN+ EA+ FRD+ G+ P++ TLASV
Sbjct: 960 ------------------LISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASV 1001
Query: 162 IS--SSVHLGGIWEC-RMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKE 218
+ S+ G + +H IK I +ST L+++Y
Sbjct: 1002 LRACSTGDEGEYFTLGSQVHVYAIKCGIINDSFVSTALIDLY------------------ 1043
Query: 219 RNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAM 278
+K G ++ A L D+ SW ++ GY++ + +AL + M
Sbjct: 1044 -------------SKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLM 1090
Query: 279 LCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRI 338
GI +++ + I A G + +G QI + +K GF+ ++ + ++ Y CG +
Sbjct: 1091 HEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDM 1150
Query: 339 NLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNE 398
+A +LF + + D +W+ MISGY +N
Sbjct: 1151 -------------------------------PNALELFGEISRPDEVAWTTMISGYIENG 1179
Query: 399 QPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSA 458
+ AL ++H M +GV+P+E T ++ A + L++G+ H V+ +L+ +
Sbjct: 1180 DEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGT 1239
Query: 459 AIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNI 518
+++DMY KCGS+ A+ VF + R V WNA++ GLA HG + L ++ ++ I
Sbjct: 1240 SLVDMYCKCGSVQDAYRVFRKMDVR--KVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGI 1297
Query: 519 KLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAE 578
+ + +TFIGVLS C H+GL +YF +M Y + P+++HY C+VD LGRAG++++AE
Sbjct: 1298 QPDKVTFIGVLSACSHSGLFSEAYKYFDAMFKTYGITPEIEHYSCLVDALGRAGRIQEAE 1357
Query: 579 EVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAG 638
VI SMP KA ++ LL A R G+ E +R A L L PS + VLLSNIYA +
Sbjct: 1358 NVIASMPFKASASMYRALLGACRTKGDAETAKRVADKLLALDPSDSSAYVLLSNIYAASR 1417
Query: 639 RWEDAFSIRKEMRDCGMKRLPGFS 662
+W+D R M+ +K+ PGFS
Sbjct: 1418 QWDDVTDARNMMKLKNVKKDPGFS 1441
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 155/708 (21%), Positives = 293/708 (41%), Gaps = 166/708 (23%)
Query: 42 GQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIR 101
G++ H+ I SG + ++ N+LI +Y+KCG + A+ +FD S D V N +++ Y
Sbjct: 630 GKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAAYA- 688
Query: 102 NDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASV 161
+ D+ SY +++ GF +F +R G +TLA +
Sbjct: 689 --QFADS-------------SYENVLEGF----------RLFGLLREFGFSITRLTLAPL 723
Query: 162 ISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNI 221
+ + G + +HG +K+ + + +S L+N+YC + +AR LFD+M ER+
Sbjct: 724 LKLCLLSGFVQVSETVHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDA 783
Query: 222 VSWNVMLNGFAKAGLVELARELF----------------------------------ERI 247
V WNVML + + + A F E++
Sbjct: 784 VLWNVMLKAYVENSFQDEALRFFSAFHRSGFXPDFSNLHCVIGGVNSDVSNNRKRHAEQV 843
Query: 248 PS-----------KDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISA 296
+ ++ +W + +L ++ A+ ++ +L I + V +V ++SA
Sbjct: 844 KAYAMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSA 903
Query: 297 CGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASW 356
A G QIH++++K+ F + ++++ Y+ G + A F + + SW
Sbjct: 904 AVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISW 963
Query: 357 NALIAGFIRNGMIEDA----RQLFNNMQKRDVYSW------------------------- 387
N +I+ + +N + +A R L + K D ++
Sbjct: 964 NTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVY 1023
Query: 388 -------------SAMISGYAQNEQPNMALELFHGMVD---------------------- 412
+A+I Y++ + + A L HG D
Sbjct: 1024 AIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKA 1083
Query: 413 ---------AGVKPNEITMVSVFCAIASSG---TLKEGRWAHEYVLNNSITLNDNL--SA 458
G+ +EIT+ + AI +SG LK+G+ Y + + N++L S+
Sbjct: 1084 LEHFSLMHEMGIPIDEITLAT---AIKASGCLINLKQGKQIQAYAIK--LGFNNDLWVSS 1138
Query: 459 AIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNI 518
++DMY KCG + A E+F I R V+ W +I G +GD + L +Y + +
Sbjct: 1139 GVLDMYIKCGDMPNALELFGEI-SRPDEVA-WTTMISGYIENGDEDHALSVYHLMRVSGV 1196
Query: 519 KLNSITFIGVL-STCCHAGLVDLGERYFKSMKSVYNVEPDLKHY--GCMVDLLGRAGQLE 575
+ + TF ++ ++ C L E+ + +V ++ L H+ +VD+ + G ++
Sbjct: 1197 QPDEYTFATLIKASSCLTAL----EQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQ 1252
Query: 576 DAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLA--GLQP 621
DA V R M ++ VV W +L HG+V+ +++ G+QP
Sbjct: 1253 DAYRVFRKMDVRK-VVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQP 1299
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 110/495 (22%), Positives = 197/495 (39%), Gaps = 98/495 (19%)
Query: 23 ELALVSALRYCSAHIA---VSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKS 79
+ L S LR CS + G Q+H K G+ +++F+ +LI+LY+K G + +A+
Sbjct: 995 QFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEF 1054
Query: 80 MFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREA 139
+ D + N ++ GYI++++ R+A
Sbjct: 1055 LLHGKYDFDLASWNAIMFGYIKSNK-------------------------------SRKA 1083
Query: 140 LEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNM 199
LE F M +G+ +E+TLA+ I +S L + + + + IKL + + +S+ +L+M
Sbjct: 1084 LEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDM 1143
Query: 200 YCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMI 259
Y C + A LF E+ + V+W M I
Sbjct: 1144 YIKCGDMPNALELFGEISRPDEVAWTTM-------------------------------I 1172
Query: 260 DGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFD 319
GY++ AL++Y M G+ P++ LI A A +G QIH+ +VK +
Sbjct: 1173 SGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYS 1232
Query: 320 CYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNM 379
F+ +++ Y CG + A F + WNA++ G ++G +++A LF M
Sbjct: 1233 LDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTM 1292
Query: 380 QKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG- 438
Q G++P+++T + V A + SG E
Sbjct: 1293 QSN-------------------------------GIQPDKVTFIGVLSACSHSGLFSEAY 1321
Query: 439 RWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLA 498
++ IT + ++D + G I A V + + S S + A++
Sbjct: 1322 KYFDAMFKTYGITPEIEHYSCLVDALGRAGRIQEAENVIASMPFK-ASASMYRALLGACR 1380
Query: 499 MHGDANLTLKIYSDL 513
GDA ++ L
Sbjct: 1381 TKGDAETAKRVADKL 1395
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 99/378 (26%), Positives = 164/378 (43%), Gaps = 78/378 (20%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E+ L +A++ I + QG+QI + K G ++ ++ + ++++Y KCG + A +F
Sbjct: 1099 EITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFG 1158
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
S D VA +T+MI G+ +N AL V
Sbjct: 1159 EISRPDEVA-------------------------------WTTMISGYIENGDEDHALSV 1187
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKL--MIDGFVIISTNLLNMY 200
+ MR+ GV P+E T A++I +S L + + + +H V+KL +D FV T+L++MY
Sbjct: 1188 YHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFV--GTSLVDMY 1245
Query: 201 CVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMID 260
C C S+ +A +F +M R +V WN ML G A+ G V+
Sbjct: 1246 CKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGHVD---------------------- 1283
Query: 261 GYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDC 320
EAL ++R M +GI P+ V + ++SAC + F E + A F
Sbjct: 1284 ---------EALNLFRTMQSNGIQPDKVTFIGVLSACSHSGLFSEAYK----YFDAMFKT 1330
Query: 321 YDFIQATIIHF------YAACGRINLAR-LQFELGIKDHIASWNALIAGFIRNGMIEDAR 373
Y I I H+ GRI A + + K + + AL+ G E A+
Sbjct: 1331 YG-ITPEIEHYSCLVDALGRAGRIQEAENVIASMPFKASASMYRALLGACRTKGDAETAK 1389
Query: 374 QLFNNMQKRDVYSWSAMI 391
++ + + D SA +
Sbjct: 1390 RVADKLLALDPSDSSAYV 1407
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 79/170 (46%), Gaps = 9/170 (5%)
Query: 435 LKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAII 494
LK G+ AH ++ + + L+ +I MY+KCGS+ +A +VF DR + WN+I+
Sbjct: 627 LKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDR--DLVTWNSIL 684
Query: 495 CGLAMHGDANLT-----LKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMK 549
A D++ +++ L + + +T +L C +G V + E
Sbjct: 685 AAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAV 744
Query: 550 SVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAA 599
+ E DL G +V++ + G + A + MP + D V+W +L A
Sbjct: 745 KI-GFELDLFVSGALVNIYCKYGLVGQARLLFDKMPER-DAVLWNVMLKA 792
>gi|225451187|ref|XP_002271063.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 805
Score = 293 bits (751), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 178/634 (28%), Positives = 301/634 (47%), Gaps = 95/634 (14%)
Query: 29 ALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLD 88
AL+ C++ + G +I S + G+E N F+ +S+I+ K G
Sbjct: 136 ALKACASSLDYEMGMEIISSAVEKGMEKNRFVGSSMISFLVKFG---------------- 179
Query: 89 PVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRI 148
++ +A+ VFD P K V + S+I G+ Q C+ A ++F +M
Sbjct: 180 ---------------KIGEAQRVFDGMPNKDVVCWNSIIGGYVQAGCFDVAFQLFFEMHG 224
Query: 149 LGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVE 208
G+ P+ +T+ S+I + +G + + +HG V+ L + +++ T+ ++MY
Sbjct: 225 SGIKPSPITMTSLIQACGGIGNLKLGKCMHGYVLGLGLGNDILVLTSFVDMY-------- 276
Query: 209 ARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERL 268
+K G +E AR +F ++P++++VSW MI G ++ +
Sbjct: 277 -----------------------SKMGDIESARWVFYKMPTRNLVSWNAMISGCVRNGLV 313
Query: 269 SEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATI 328
E+ ++ ++ + IV L+ C + + G +H +++ F+ + I
Sbjct: 314 GESFDLFHRLVRSSGGFDLTTIVSLLQGCSQTASLATGKILHGCAIRS-FESNLILSTAI 372
Query: 329 IHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWS 388
+ Y+ CG + A +FN M+ R+V +W+
Sbjct: 373 VDLYSKCGSLKQATF-------------------------------VFNRMKDRNVITWT 401
Query: 389 AMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNN 448
AM+ G AQN AL LF M + G+ N +T VS+ + A G+LK GR H ++
Sbjct: 402 AMLVGLAQNGHAEDALRLFAQMQEEGIAANSVTFVSLVHSCAHLGSLKRGRSIHGHLFRL 461
Query: 449 SITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLK 508
+ A++DMYAKCG IN A +F H + V WN++I G MHG +
Sbjct: 462 GFAFDIVNMTALVDMYAKCGKINLAERIFSH-GSISKDVVLWNSMITGYGMHGHGYQAVG 520
Query: 509 IYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLL 568
IY + + +K N TF+ +LS C H+ LV+ G F SM+ +N+ P KHY C+VDLL
Sbjct: 521 IYHKMIEEGLKPNQTTFLSLLSACSHSRLVEQGISLFNSMERDHNIRPIEKHYACLVDLL 580
Query: 569 GRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRV 628
RAG+ E+A+ +I MP + + LL+ R H N+ +G + + L L + +
Sbjct: 581 SRAGRFEEAQALIEKMPFQPGTAVLEALLSGCRTHKNINLGIQTSDKLLALDAMNPGIYI 640
Query: 629 LLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
+LSNIYA+A RW+ IR MR+ G+K+ PG+S
Sbjct: 641 MLSNIYAEARRWDKVDYIRGLMRNRGLKKTPGYS 674
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 113/498 (22%), Positives = 208/498 (41%), Gaps = 109/498 (21%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+ + S ++ C + G+ +H + GL ++ + S +++Y+K G I A+ +F
Sbjct: 232 ITMTSLIQACGGIGNLKLGKCMHGYVLGLGLGNDILVLTSFVDMYSKMGDIESARWVFYK 291
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
T + V+ N MISG +RN + ++ ++F
Sbjct: 292 MPTRNLVSWNAMISGCVRNGLVGESFDLFH------------------------------ 321
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
R +R G + T+ S++ + ++LHG I+ + +I+ST ++++Y C
Sbjct: 322 RLVRSSGGF-DLTTIVSLLQGCSQTASLATGKILHGCAIR-SFESNLILSTAIVDLYSKC 379
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYL 263
SL +A +F+ MK+RN+++W ML G A+ G E
Sbjct: 380 GSLKQATFVFNRMKDRNVITWTAMLVGLAQNGHAE------------------------- 414
Query: 264 QVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDF 323
+AL ++ M +GIA N V V L+ +C + G IH + + GF +D
Sbjct: 415 ------DALRLFAQMQEEGIAANSVTFVSLVHSCAHLGSLKRGRSIHGHLFRLGF-AFDI 467
Query: 324 IQAT-IIHFYAACGRINLARLQFELG-IKDHIASWNALIAGFIRNGMIEDARQLFNNMQK 381
+ T ++ YA CG+INLA F G I + WN
Sbjct: 468 VNMTALVDMYAKCGKINLAERIFSHGSISKDVVLWN------------------------ 503
Query: 382 RDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWA 441
+MI+GY + A+ ++H M++ G+KPN+ T +S+ A + S +++G
Sbjct: 504 -------SMITGYGMHGHGYQAVGIYHKMIEEGLKPNQTTFLSLLSACSHSRLVEQG--- 553
Query: 442 HEYVLNNSITLNDNLS------AAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIIC 495
L NS+ + N+ A ++D+ ++ G A + + A++
Sbjct: 554 --ISLFNSMERDHNIRPIEKHYACLVDLLSRAGRFEEA-QALIEKMPFQPGTAVLEALLS 610
Query: 496 GLAMHGDANLTLKIYSDL 513
G H + NL ++ L
Sbjct: 611 GCRTHKNINLGIQTSDKL 628
>gi|449447363|ref|XP_004141438.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Cucumis sativus]
Length = 1573
Score = 293 bits (751), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 184/624 (29%), Positives = 301/624 (48%), Gaps = 98/624 (15%)
Query: 42 GQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIR 101
G+QIH+L+ KS + NSL+N+Y+K G++ A+ F + LD
Sbjct: 913 GEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELD------------- 959
Query: 102 NDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASV 161
+S+ +MI +AQN+ EA+ FRD+ G+ P++ TLASV
Sbjct: 960 ------------------LISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASV 1001
Query: 162 IS--SSVHLGGIWEC-RMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKE 218
+ S+ G + +H IK I +ST L+++Y
Sbjct: 1002 LRACSTGDEGEYFTLGSQVHVYAIKCGIINDSFVSTALIDLY------------------ 1043
Query: 219 RNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAM 278
+K G ++ A L D+ SW ++ GY++ + +AL + M
Sbjct: 1044 -------------SKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKALEHFSLM 1090
Query: 279 LCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRI 338
GI +++ + I A G + +G QI + +K GF+ ++ + ++ Y CG +
Sbjct: 1091 HEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDM 1150
Query: 339 NLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNE 398
+A +LF + + D +W+ MISGY +N
Sbjct: 1151 -------------------------------PNALELFGEISRPDEVAWTTMISGYIENG 1179
Query: 399 QPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSA 458
+ AL ++H M +GV+P+E T ++ A + L++G+ H V+ +L+ +
Sbjct: 1180 DEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGT 1239
Query: 459 AIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNI 518
+++DMY KCGS+ A+ VF + R V WNA++ GLA HG + L ++ ++ I
Sbjct: 1240 SLVDMYCKCGSVQDAYRVFRKMDVR--KVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGI 1297
Query: 519 KLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAE 578
+ + +TFIGVLS C H+GL +YF +M Y + P+++HY C+VD LGRAG++++AE
Sbjct: 1298 QPDKVTFIGVLSACSHSGLFSEAYKYFDAMFKTYGITPEIEHYSCLVDALGRAGRIQEAE 1357
Query: 579 EVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAG 638
VI SMP KA ++ LL A R G+ E +R A L L PS + VLLSNIYA +
Sbjct: 1358 NVIASMPFKASASMYRALLGACRTKGDAETAKRVADKLLALDPSDSSAYVLLSNIYAASR 1417
Query: 639 RWEDAFSIRKEMRDCGMKRLPGFS 662
+W+D R M+ +K+ PGFS
Sbjct: 1418 QWDDVTDARNMMKLKNVKKDPGFS 1441
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 155/708 (21%), Positives = 293/708 (41%), Gaps = 166/708 (23%)
Query: 42 GQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIR 101
G++ H+ I SG + ++ N+LI +Y+KCG + A+ +FD S D V N +++ Y
Sbjct: 630 GKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAAYA- 688
Query: 102 NDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASV 161
+ D+ SY +++ GF +F +R G +TLA +
Sbjct: 689 --QFADS-------------SYENVLEGF----------RLFGLLREFGFSITRLTLAPL 723
Query: 162 ISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNI 221
+ + G + +HG +K+ + + +S L+N+YC + +AR LFD+M ER+
Sbjct: 724 LKLCLLSGFVQVSETVHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDA 783
Query: 222 VSWNVMLNGFAKAGLVELARELF----------------------------------ERI 247
V WNVML + + + A F E++
Sbjct: 784 VLWNVMLKAYVENSFQDEALRFFSAFHRSGFFPDFSNLHCVIGGVNSDVSNNRKRHAEQV 843
Query: 248 PS-----------KDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISA 296
+ ++ +W + +L ++ A+ ++ +L I + V +V ++SA
Sbjct: 844 KAYAMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSA 903
Query: 297 CGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASW 356
A G QIH++++K+ F + ++++ Y+ G + A F + + SW
Sbjct: 904 AVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISW 963
Query: 357 NALIAGFIRNGMIEDA----RQLFNNMQKRDVYSW------------------------- 387
N +I+ + +N + +A R L + K D ++
Sbjct: 964 NTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVY 1023
Query: 388 -------------SAMISGYAQNEQPNMALELFHGMVD---------------------- 412
+A+I Y++ + + A L HG D
Sbjct: 1024 AIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSNKSRKA 1083
Query: 413 ---------AGVKPNEITMVSVFCAIASSG---TLKEGRWAHEYVLNNSITLNDNL--SA 458
G+ +EIT+ + AI +SG LK+G+ Y + + N++L S+
Sbjct: 1084 LEHFSLMHEMGIPIDEITLAT---AIKASGCLINLKQGKQIQAYAIK--LGFNNDLWVSS 1138
Query: 459 AIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNI 518
++DMY KCG + A E+F I R V+ W +I G +GD + L +Y + +
Sbjct: 1139 GVLDMYIKCGDMPNALELFGEI-SRPDEVA-WTTMISGYIENGDEDHALSVYHLMRVSGV 1196
Query: 519 KLNSITFIGVL-STCCHAGLVDLGERYFKSMKSVYNVEPDLKHY--GCMVDLLGRAGQLE 575
+ + TF ++ ++ C L E+ + +V ++ L H+ +VD+ + G ++
Sbjct: 1197 QPDEYTFATLIKASSCLTAL----EQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQ 1252
Query: 576 DAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLA--GLQP 621
DA V R M ++ VV W +L HG+V+ +++ G+QP
Sbjct: 1253 DAYRVFRKMDVRK-VVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQP 1299
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 110/495 (22%), Positives = 197/495 (39%), Gaps = 98/495 (19%)
Query: 23 ELALVSALRYCSAHIA---VSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKS 79
+ L S LR CS + G Q+H K G+ +++F+ +LI+LY+K G + +A+
Sbjct: 995 QFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEF 1054
Query: 80 MFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREA 139
+ D + N ++ GYI++++ R+A
Sbjct: 1055 LLHGKYDFDLASWNAIMFGYIKSNK-------------------------------SRKA 1083
Query: 140 LEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNM 199
LE F M +G+ +E+TLA+ I +S L + + + + IKL + + +S+ +L+M
Sbjct: 1084 LEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDM 1143
Query: 200 YCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMI 259
Y C + A LF E+ + V+W M I
Sbjct: 1144 YIKCGDMPNALELFGEISRPDEVAWTTM-------------------------------I 1172
Query: 260 DGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFD 319
GY++ AL++Y M G+ P++ LI A A +G QIH+ +VK +
Sbjct: 1173 SGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYS 1232
Query: 320 CYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNM 379
F+ +++ Y CG + A F + WNA++ G ++G +++A LF M
Sbjct: 1233 LDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTM 1292
Query: 380 QKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG- 438
Q G++P+++T + V A + SG E
Sbjct: 1293 QSN-------------------------------GIQPDKVTFIGVLSACSHSGLFSEAY 1321
Query: 439 RWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLA 498
++ IT + ++D + G I A V + + S S + A++
Sbjct: 1322 KYFDAMFKTYGITPEIEHYSCLVDALGRAGRIQEAENVIASMPFK-ASASMYRALLGACR 1380
Query: 499 MHGDANLTLKIYSDL 513
GDA ++ L
Sbjct: 1381 TKGDAETAKRVADKL 1395
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 99/378 (26%), Positives = 164/378 (43%), Gaps = 78/378 (20%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E+ L +A++ I + QG+QI + K G ++ ++ + ++++Y KCG + A +F
Sbjct: 1099 EITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFG 1158
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
S D VA +T+MI G+ +N AL V
Sbjct: 1159 EISRPDEVA-------------------------------WTTMISGYIENGDEDHALSV 1187
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKL--MIDGFVIISTNLLNMY 200
+ MR+ GV P+E T A++I +S L + + + +H V+KL +D FV T+L++MY
Sbjct: 1188 YHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFV--GTSLVDMY 1245
Query: 201 CVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMID 260
C C S+ +A +F +M R +V WN ML G A+ G V+
Sbjct: 1246 CKCGSVQDAYRVFRKMDVRKVVFWNAMLLGLAQHGHVD---------------------- 1283
Query: 261 GYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDC 320
EAL ++R M +GI P+ V + ++SAC + F E + A F
Sbjct: 1284 ---------EALNLFRTMQSNGIQPDKVTFIGVLSACSHSGLFSEAYK----YFDAMFKT 1330
Query: 321 YDFIQATIIHF------YAACGRINLAR-LQFELGIKDHIASWNALIAGFIRNGMIEDAR 373
Y I I H+ GRI A + + K + + AL+ G E A+
Sbjct: 1331 YG-ITPEIEHYSCLVDALGRAGRIQEAENVIASMPFKASASMYRALLGACRTKGDAETAK 1389
Query: 374 QLFNNMQKRDVYSWSAMI 391
++ + + D SA +
Sbjct: 1390 RVADKLLALDPSDSSAYV 1407
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 79/170 (46%), Gaps = 9/170 (5%)
Query: 435 LKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAII 494
LK G+ AH ++ + + L+ +I MY+KCGS+ +A +VF DR + WN+I+
Sbjct: 627 LKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDR--DLVTWNSIL 684
Query: 495 CGLAMHGDANLT-----LKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMK 549
A D++ +++ L + + +T +L C +G V + E
Sbjct: 685 AAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAV 744
Query: 550 SVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAA 599
+ E DL G +V++ + G + A + MP + D V+W +L A
Sbjct: 745 KI-GFELDLFVSGALVNIYCKYGLVGQARLLFDKMPER-DAVLWNVMLKA 792
>gi|147862014|emb|CAN80898.1| hypothetical protein VITISV_028645 [Vitis vinifera]
Length = 822
Score = 293 bits (751), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 190/641 (29%), Positives = 310/641 (48%), Gaps = 75/641 (11%)
Query: 28 SALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTL 87
S L C+ ++++G+Q+H I G E + + L+ Y+ L+ A + ++ + L
Sbjct: 179 SLLSSCTDVKSLAEGRQLHGHIISLGFEQHPILVPKLVTFYSAFNLLVDAHVITENSNIL 238
Query: 88 DPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMR 147
P N++IS Y+RN GF Q +AL ++ M
Sbjct: 239 HPFPWNLLISSYVRN--------------------------GFCQ-----KALSAYKQMV 267
Query: 148 ILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLV 207
G+ P+ T SV+ + + + +H + I +I+ L++MY C +
Sbjct: 268 KKGIRPDNFTYPSVLKACGEELDLGFGKEVHESINASRIKWSLIVHNALISMYGKCGKVG 327
Query: 208 EARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKD----VVSWGTMIDGYL 263
AR LFD++ ER+ VSWN M++ +A G+ A ELF + ++D ++ W T+ GYL
Sbjct: 328 IARDLFDKIPERDAVSWNSMISVYASMGMWNEAFELFGSMWAEDIELNIIIWNTIAGGYL 387
Query: 264 QVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDF 323
+ AL + M G + V ++ + AC G +IHS +++ F D
Sbjct: 388 RTGNYKGALELLSQMRKXGSHLDSVALIIGLGACSHIGDAKLGKEIHSFAIRSCFGEVDT 447
Query: 324 IQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRD 383
++ ++I Y+ C + A L F+L + SWN++I+G E+A L
Sbjct: 448 VKNSLITMYSRCKDLKHAYLLFQLMEAKSLISWNSIISGCCHMDRSEEASFLLRE----- 502
Query: 384 VYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHE 443
M+ +G++PN +T+ SV A L+ G+ H
Sbjct: 503 --------------------------MLLSGIEPNYVTIASVLPLCARVANLQHGKEFHC 536
Query: 444 YVLNNSITLNDNLSA--AIIDMYAKCGSINTAFEVFYHI--RDRTTSVSPWNAIICGLAM 499
Y+ D+L A++DMYA+ G + A VF + RD+ T + ++I G M
Sbjct: 537 YMTRRE-DFKDHLLLWNALVDMYARSGKVLEARRVFDMLGERDKMT----YTSMIAGYGM 591
Query: 500 HGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLK 559
G+ LK++ ++ IK + IT I VLS C H+GLV G+ F+ M+S+Y + P L+
Sbjct: 592 QGEGQAALKLFEEMNNFQIKPDHITMIAVLSACSHSGLVTQGQLLFEKMRSLYGLTPHLE 651
Query: 560 HYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGL 619
H+ CM DL GRAG L A+E+IR+MP K +W TL+ A RIH N E+GE AA+ L +
Sbjct: 652 HFACMTDLFGRAGLLNKAKEIIRNMPYKPTPAMWATLIGACRIHRNTEIGEWAAEKLLEM 711
Query: 620 QPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPG 660
+P + VL++N+YA AG W +R MRD G+++ PG
Sbjct: 712 KPENPGYYVLIANMYAAAGCWNKLAKVRXFMRDLGVRKAPG 752
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 100/472 (21%), Positives = 202/472 (42%), Gaps = 40/472 (8%)
Query: 158 LASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMK 217
++S++SS + + E R LHG +I L + I+ L+ Y + LV+A + +
Sbjct: 177 ISSLLSSCTDVKSLAEGRQLHGHIISLGFEQHPILVPKLVTFYSAFNLLVDAHVITENSN 236
Query: 218 ERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRA 277
+ WN++++ + + G + +AL+ Y+
Sbjct: 237 ILHPFPWNLLISSYVRNGFCQ-------------------------------KALSAYKQ 265
Query: 278 MLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGR 337
M+ GI P++ ++ ACG + G G ++H I + + +I Y CG+
Sbjct: 266 MVKKGIRPDNFTYPSVLKACGEELDLGFGKEVHESINASRIKWSLIVHNALISMYGKCGK 325
Query: 338 INLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRD----VYSWSAMISG 393
+ +AR F+ + SWN++I+ + GM +A +LF +M D + W+ + G
Sbjct: 326 VGIARDLFDKIPERDAVSWNSMISVYASMGMWNEAFELFGSMWAEDIELNIIIWNTIAGG 385
Query: 394 YAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLN 453
Y + ALEL M G + + ++ A + G K G+ H + + +
Sbjct: 386 YLRTGNYKGALELLSQMRKXGSHLDSVALIIGLGACSHIGDAKLGKEIHSFAIRSCFGEV 445
Query: 454 DNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDL 513
D + ++I MY++C + A+ +F + + S+ WN+II G + + ++
Sbjct: 446 DTVKNSLITMYSRCKDLKHAYLLFQLMEAK--SLISWNSIISGCCHMDRSEEASFLLREM 503
Query: 514 EKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQ 573
I+ N +T VL C + G+ + M + + L + +VD+ R+G+
Sbjct: 504 LLSGIEPNYVTIASVLPLCARVANLQHGKEFHCYMTRREDFKDHLLLWNALVDMYARSGK 563
Query: 574 LEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQ--PSH 623
+ +A V M + D + + +++A + G + + + + Q P H
Sbjct: 564 VLEARRVF-DMLGERDKMTYTSMIAGYGMQGEGQAALKLFEEMNNFQIKPDH 614
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 94/469 (20%), Positives = 177/469 (37%), Gaps = 132/469 (28%)
Query: 24 LALVSALRYCSAHIAVSQ-GQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
+AL+ L CS HI ++ G++IHS +S ++NSLI +Y++C + A +F
Sbjct: 412 VALIIGLGACS-HIGDAKLGKEIHSFAIRSCFGEVDTVKNSLITMYSRCKDLKHAYLLF- 469
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+L +A+ + +S+ S+I G D EA +
Sbjct: 470 ---------------------QLMEAKSL---------ISWNSIISGCCHMDRSEEASFL 499
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLM-IDGFVIISTNLLNMYC 201
R+M + G+ PN VT+ASV+ + + + H + + +++ L++MY
Sbjct: 500 LREMLLSGIEPNYVTIASVLPLCARVANLQHGKEFHCYMTRREDFKDHLLLWNALVDMYA 559
Query: 202 VCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDG 261
++EAR +FD + ER+ +++ M+ G+ G + A +LFE + +
Sbjct: 560 RSGKVLEARRVFDMLGERDKMTYTSMIAGYGMQGEGQAALKLFEEMNNFQ---------- 609
Query: 262 YLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCY 321
I P+ + ++ ++SAC HS +V
Sbjct: 610 ---------------------IKPDHITMIAVLSACS-----------HSGLVTQ----- 632
Query: 322 DFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQK 381
G++ +++ G+ H+ + + F R G++ A+++ NM
Sbjct: 633 --------------GQLLFEKMRSLYGLTPHLEHFACMTDLFGRAGLLNKAKEIIRNMPY 678
Query: 382 RDVYS-WSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRW 440
+ + W+ +I C I + + G W
Sbjct: 679 KPTPAMWATLIGA---------------------------------CRIHRNTEI--GEW 703
Query: 441 AHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSP 489
A E +L N I +MYA G N +V +RD +P
Sbjct: 704 AAEKLLEMKPE-NPGYYVLIANMYAAAGCWNKLAKVRXFMRDLGVRKAP 751
>gi|449454362|ref|XP_004144924.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
mitochondrial-like [Cucumis sativus]
Length = 664
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 197/640 (30%), Positives = 319/640 (49%), Gaps = 108/640 (16%)
Query: 93 NIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVI 152
N IS IR R+N+ARE+FD T +++ MI + + +A ++F +M
Sbjct: 61 NKKISYLIRTGRINEARELFDSTEHWNTITWNRMITAYVKRREMLKARQLFEEM------ 114
Query: 153 PNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSL 212
PN ++S W LM+ G++ C + AR++
Sbjct: 115 PNR----DIVS--------W----------NLMLSGYI---------SCGGKFVERARNM 143
Query: 213 FDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEAL 272
FD+M E + VSWN ML+G+AK+G+++ A ELF +P ++VVSW M+ GYL + +A+
Sbjct: 144 FDQMPETDCVSWNTMLSGYAKSGMMDKAEELFNEMPERNVVSWNAMVSGYLMNGHVEKAI 203
Query: 273 TMYRAM----------LCDGIAPNDVMIV---------------DLISACGRAMAFGEGL 307
++ M L G+ ND ++ DL+ A +A G G
Sbjct: 204 EFFKLMPKRDSASLRALISGLIQNDKLVEAERILLQYGGNVGKGDLVDAYNTLIA-GYGQ 262
Query: 308 QIHSIIVKAGFD----CYD--FIQATIIHF------YAACGRINLARLQFELGIKDHIAS 355
+ + + FD C D + + +I + Y G I AR F+ ++ S
Sbjct: 263 KGMAYEARKLFDRIPLCCDCGYSRRNVISWNSMIMCYVRAGDIVSARELFDKMVERDTFS 322
Query: 356 WNALIAGFIRNGMIEDARQLFNNMQKRD-------------------------------V 384
WN +I+G+++ +++A LF+ M + D +
Sbjct: 323 WNTMISGYVQILDMKEASNLFSRMPEPDTLSWNMMISGFSEIGSLKLAHDLFKRIPEKSL 382
Query: 385 YSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEY 444
SW++MISGY +NE A+ +F M G KP+ T+ S+ A A L G H+
Sbjct: 383 VSWNSMISGYEKNEDYKGAMNIFLQMQLEGKKPDRHTLSSILSACAGLVDLVLGTQIHQL 442
Query: 445 VLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDAN 504
V I + ++ +++ MY++CG+I A VF + + +S WNA+I G A HG A
Sbjct: 443 VTKAFIA-DLPINNSLVTMYSRCGAIVEARMVFDEMNLQRDVIS-WNAMIGGYAYHGFAT 500
Query: 505 LTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCM 564
L+++ +++ N++ + ITFI VL+ C HAGL++ G R F SM + + ++P ++HY +
Sbjct: 501 EALQLFDLMKQCNVQPSYITFISVLNACAHAGLIEEGRREFNSMVNTHGIKPQVEHYAAL 560
Query: 565 VDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHG 624
VD++GR GQLE+A +I SMP + D +WG LL A ++H NVE+ AA++L LQP
Sbjct: 561 VDIIGRHGQLEEAMSLINSMPCEPDKAVWGALLGACKVHNNVEMARAAAEALMKLQPESS 620
Query: 625 PSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
VLL N+YAD GRW+DA +R M +++ G+S V
Sbjct: 621 APYVLLHNMYADVGRWDDAAEMRTMMEKNNVQKDAGYSRV 660
Score = 166 bits (419), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 126/499 (25%), Positives = 224/499 (44%), Gaps = 79/499 (15%)
Query: 49 IFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDA 108
+F E++ N++++ YAK G++ +A+ +F+ + V+ N M+SGY+ N + A
Sbjct: 143 MFDQMPETDCVSWNTMLSGYAKSGMMDKAEELFNEMPERNVVSWNAMVSGYLMNGHVEKA 202
Query: 109 REVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV-------------------------- 142
E F P + S ++I G QND EA +
Sbjct: 203 IEFFKLMPKRDSASLRALISGLIQNDKLVEAERILLQYGGNVGKGDLVDAYNTLIAGYGQ 262
Query: 143 ----FRDMRILGVIP----------NEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDG 188
+ ++ IP N ++ S+I V G I R L M++
Sbjct: 263 KGMAYEARKLFDRIPLCCDCGYSRRNVISWNSMIMCYVRAGDIVSAREL----FDKMVER 318
Query: 189 FVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIP 248
+++ Y + EA +LF M E + +SWN+M++GF++ G ++LA +LF+RIP
Sbjct: 319 DTFSWNTMISGYVQILDMKEASNLFSRMPEPDTLSWNMMISGFSEIGSLKLAHDLFKRIP 378
Query: 249 SKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQ 308
K +VSW +MI GY + E A+ ++ M +G P+ + ++SAC + G Q
Sbjct: 379 EKSLVSWNSMISGYEKNEDYKGAMNIFLQMQLEGKKPDRHTLSSILSACAGLVDLVLGTQ 438
Query: 309 IHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQF-ELGIKDHIASWNALIAGFIRNG 367
IH ++ KA F I +++ Y+ CG I AR+ F E+ ++ + SWNA+I G+ +G
Sbjct: 439 IHQLVTKA-FIADLPINNSLVTMYSRCGAIVEARMVFDEMNLQRDVISWNAMIGGYAYHG 497
Query: 368 MIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFC 427
+A QLF+ M++ V+P+ IT +SV
Sbjct: 498 FATEALQLFDLMKQ-------------------------------CNVQPSYITFISVLN 526
Query: 428 AIASSGTLKEGRWAHEYVLN-NSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTS 486
A A +G ++EGR ++N + I AA++D+ + G + A + +
Sbjct: 527 ACAHAGLIEEGRREFNSMVNTHGIKPQVEHYAALVDIIGRHGQLEEAMSLINSMPCEPDK 586
Query: 487 VSPWNAIICGLAMHGDANL 505
+ W A++ +H + +
Sbjct: 587 -AVWGALLGACKVHNNVEM 604
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/250 (20%), Positives = 109/250 (43%), Gaps = 19/250 (7%)
Query: 355 SWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAG 414
S N I+ IR G I +AR+LF++ + + +W+ MI+ Y + + A +LF M +
Sbjct: 59 SLNKKISYLIRTGRINEARELFDSTEHWNTITWNRMITAYVKRREMLKARQLFEEMPNRD 118
Query: 415 VKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAF 474
+ + M+S + + + + + ++ N LS YAK G ++ A
Sbjct: 119 IVSWNL-MLSGYISCGGKFVERARNMFDQMPETDCVSWNTMLSG-----YAKSGMMDKAE 172
Query: 475 EVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCH 534
E+F + +R +V WNA++ G M+G ++ + + KR +S + ++S
Sbjct: 173 ELFNEMPER--NVVSWNAMVSGYLMNGHVEKAIEFFKLMPKR----DSASLRALISGLIQ 226
Query: 535 AGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPM-------K 587
+ ER + Y ++ G+ G +A ++ +P+ +
Sbjct: 227 NDKLVEAERILLQYGGNVGKGDLVDAYNTLIAGYGQKGMAYEARKLFDRIPLCCDCGYSR 286
Query: 588 ADVVIWGTLL 597
+V+ W +++
Sbjct: 287 RNVISWNSMI 296
>gi|449480326|ref|XP_004155862.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Cucumis sativus]
Length = 939
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 177/639 (27%), Positives = 305/639 (47%), Gaps = 97/639 (15%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+ S L C + +AV +G +H +I K G+ + I N L+++Y K
Sbjct: 223 FTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKF------------ 270
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
+RL +AR VF K +K V++ +MI G+AQ ++++F
Sbjct: 271 -------------------ERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLF 311
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
DM I G +P+ +++ S I + G + + +H +I GF
Sbjct: 312 MDM-IDGFVPDMLSITSTIRACGQSGDLQVGKFVHKYLIG---SGF-------------- 353
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYL 263
E + V+ N++++ +AK G + A+E+F+ KD V+W ++I+GY
Sbjct: 354 --------------ECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYT 399
Query: 264 QVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDF 323
Q E L ++ M + P+ V V L+S + +G IH ++K GF+
Sbjct: 400 QSGYYKEGLESFKMMKMER-KPDSVTFVLLLSIFSQLADINQGRGIHCDVIKFGFEAELI 458
Query: 324 IQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRD 383
I +++ YA CG + +D ++F+ M D
Sbjct: 459 IGNSLLDVYAKCGEM-------------------------------DDLLKVFSYMSAHD 487
Query: 384 VYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHE 443
+ SW+ +I+ + + ++ + M G+ P+E T++ + + ++G+ H
Sbjct: 488 IISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLAVRRQGKEIHG 547
Query: 444 YVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDA 503
Y+ + N + A+I+MY+KCGS+ +VF +++++ V W A+I M+G+
Sbjct: 548 YIFKSGFESNVPIGNALIEMYSKCGSLENCIKVFKYMKEK--DVVTWTALISAFGMYGEG 605
Query: 504 NLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGC 563
LK + D+E + +S+ FI + C H+G+V G R+F MK+ YN+EP ++HY C
Sbjct: 606 KKALKAFQDMELSGVLPDSVAFIAFIFACSHSGMVKEGLRFFDRMKTDYNLEPRMEHYAC 665
Query: 564 MVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSH 623
+VDLL R+G L AEE I SMPMK D +WG LL+A R GN + +R +K + L
Sbjct: 666 VVDLLARSGLLAQAEEFILSMPMKPDASLWGALLSACRARGNTNIAQRVSKKILELNSDD 725
Query: 624 GPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
VL+SNIYA G+W+ ++R M+ G+K+ PG S
Sbjct: 726 TGYYVLVSNIYATLGKWDQVKTVRNSMKTKGLKKEPGSS 764
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 148/620 (23%), Positives = 250/620 (40%), Gaps = 106/620 (17%)
Query: 10 FNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYA 69
F S N E S L+ S+ Q + +HSLI SGL + LI+ YA
Sbjct: 6 FCSNFNNTPEPSQEFLRSSLLKTLSSAKNTPQLRTVHSLIITSGLSLSVIFSGKLISKYA 65
Query: 70 KCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMG 129
Q K S S + +P + S+I
Sbjct: 66 ------QVKDPISSVSVFRSI------------------------SPTNNVYLWNSIIRA 95
Query: 130 FAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGF 189
N + +AL + +MR + P+ T SVI+S + + ++H +++ +
Sbjct: 96 LTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCIVHEHAMEMGFESD 155
Query: 190 VIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPS 249
+ I L++MY L AR +F+EM R+ VSWN +++G+ G E
Sbjct: 156 LYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWE----------- 204
Query: 250 KDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQI 309
+AL MY G+ P+ + ++ ACG MA EG+ +
Sbjct: 205 --------------------DALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAV 244
Query: 310 HSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQF-ELGIKDHIASWNALIAGFIRNGM 368
H +I K G I ++ Y R+ AR F ++ +KD + +WN +I G
Sbjct: 245 HGVIEKIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVKDSV-TWNTMICG------ 297
Query: 369 IEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCA 428
YAQ + +++LF M+D G P+ +++ S A
Sbjct: 298 -------------------------YAQLGRHEASVKLFMDMID-GFVPDMLSITSTIRA 331
Query: 429 IASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVF--YHIRDRTTS 486
SG L+ G++ H+Y++ + + +IDMYAKCG + A EVF +D T
Sbjct: 332 CGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVT- 390
Query: 487 VSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFK 546
WN++I G G L+ + + K K +S+TF+ +LS ++ G R
Sbjct: 391 ---WNSLINGYTQSGYYKEGLESFK-MMKMERKPDSVTFVLLLSIFSQLADINQG-RGIH 445
Query: 547 SMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNV 606
+ E +L ++D+ + G+++D +V M D++ W T++A+S +
Sbjct: 446 CDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAH-DIISWNTVIASSVHFDDC 504
Query: 607 EVGERAAKSL--AGLQPSHG 624
VG + + GL P
Sbjct: 505 TVGFQMINEMRTEGLMPDEA 524
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 96/243 (39%), Gaps = 72/243 (29%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E ++ L CS QG++IH IFKSG ESN I N+LI +Y+KCG
Sbjct: 523 EATVLGILPMCSLLAVRRQGKEIHGYIFKSGFESNVPIGNALIEMYSKCG---------- 572
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
L + +VF K V++T++I F ++AL+
Sbjct: 573 ---------------------SLENCIKVFKYMKEKDVVTWTALISAFGMYGEGKKALKA 611
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
F+DM + GV+P+ V + I + H G + E GL
Sbjct: 612 FQDMELSGVLPDSVAFIAFIFACSHSGMVKE-----GL---------------------- 644
Query: 203 CSSLVEARSLFDEMK-----ERNIVSWNVMLNGFAKAGLVELARELFERIPSK-DVVSWG 256
FD MK E + + +++ A++GL+ A E +P K D WG
Sbjct: 645 --------RFFDRMKTDYNLEPRMEHYACVVDLLARSGLLAQAEEFILSMPMKPDASLWG 696
Query: 257 TMI 259
++
Sbjct: 697 ALL 699
>gi|225434183|ref|XP_002275535.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Vitis vinifera]
Length = 513
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 160/429 (37%), Positives = 247/429 (57%), Gaps = 7/429 (1%)
Query: 240 ARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPN--DVMIVDLISAC 297
A+ +F ++P+ +V SW +I ++ AL + L APN + + LI AC
Sbjct: 64 AQLIFAQLPNPNVFSWNAIIKAHINCGAWEHALNCFNRQLSLPSAPNPNEYIYTSLIKAC 123
Query: 298 GRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQF-ELGIKDHIASW 356
A +GL++H++++K+G D + +++ Y A F E+ ++D + SW
Sbjct: 124 AGLEAIADGLKVHAVVIKSGLDNNIHLGTSLVDMYFKFREPASAGQVFDEMPLRD-VVSW 182
Query: 357 NALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVD-AGV 415
N +++G+ G +E AR++F+ M +RDV SW+AMI GY QN + + A+E+FH M GV
Sbjct: 183 NTMVSGYCLCGDLESARRVFDQMLERDVISWNAMIGGYVQNGKYSDAIEVFHEMQKVGGV 242
Query: 416 KPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFE 475
P+++T+VSV A A G L GRW +V LN L A+IDMYAKCG++ A
Sbjct: 243 VPDDVTLVSVLSACAHVGALDFGRWIDRFVGWRGRGLNLYLGNALIDMYAKCGTMEEARR 302
Query: 476 VFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHA 535
+F +R+R V W+ +ICG HGDA+ YS + + +K N +TF+G+LS C HA
Sbjct: 303 IFDGMRER--DVISWSTMICGSGTHGDADEAFGYYSKMLECGVKPNEVTFMGLLSACSHA 360
Query: 536 GLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGT 595
GLVD G F M Y + P + HYGC++DLL RAG+L++AE++I SMP++ +V++WG
Sbjct: 361 GLVDKGIELFSRMIQEYRIVPKVGHYGCVIDLLSRAGRLDEAEDLINSMPIEPNVIVWGA 420
Query: 596 LLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGM 655
LL RIH + GER A+ L L + S V ++ A GR +DA + M+ G+
Sbjct: 421 LLGGCRIHKDFRRGERVAQHLLELDSEYTGSYVYIAGAKASVGRVDDAANCWLRMQHKGI 480
Query: 656 KRLPGFSGV 664
+ PG S +
Sbjct: 481 IKDPGCSKI 489
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 123/462 (26%), Positives = 210/462 (45%), Gaps = 53/462 (11%)
Query: 54 LESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNI-MISGYIRNDRLNDAREVF 112
L+ T + N + K L QA+ + + +L P + +I N L A+ +F
Sbjct: 9 LKLTTLLLNYAEHFQTKQLLQIQAQLITNPPLSLHPNLIAVKLIGACAANANLYHAQLIF 68
Query: 113 DKTPIKCCVSYTSMIMGFAQNDCWREALEVF-RDMRILGVI-PNEVTLASVISSSVHLGG 170
+ P S+ ++I W AL F R + + PNE S+I + L
Sbjct: 69 AQLPNPNVFSWNAIIKAHINCGAWEHALNCFNRQLSLPSAPNPNEYIYTSLIKACAGLEA 128
Query: 171 IWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNG 230
I + +H +VIK +D + + T+L++MY A +FDEM R++VSWN M++G
Sbjct: 129 IADGLKVHAVVIKSGLDNNIHLGTSLVDMYFKFREPASAGQVFDEMPLRDVVSWNTMVSG 188
Query: 231 FAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAML-CDGIAPNDVM 289
+ G +E AR +F+++ +DV+SW MI GY+Q + S+A+ ++ M G+ P+DV
Sbjct: 189 YCLCGDLESARRVFDQMLERDVISWNAMIGGYVQNGKYSDAIEVFHEMQKVGGVVPDDVT 248
Query: 290 IVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGI 349
+V ++SAC A G I + G ++ +I YA CG + AR
Sbjct: 249 LVSVLSACAHVGALDFGRWIDRFVGWRGRGLNLYLGNALIDMYAKCGTMEEAR------- 301
Query: 350 KDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHG 409
++F+ M++RDV SWS MI G + + A +
Sbjct: 302 ------------------------RIFDGMRERDVISWSTMICGSGTHGDADEAFGYYSK 337
Query: 410 MVDAGVKPNEITMVSVFCAIASSGTLKEG-----RWAHEYVLNNSITLNDNLSAAIIDMY 464
M++ GVKPNE+T + + A + +G + +G R EY I +ID+
Sbjct: 338 MLECGVKPNEVTFMGLLSACSHAGLVDKGIELFSRMIQEY----RIVPKVGHYGCVIDLL 393
Query: 465 AKCGSINTAFEVFYHIRDRTTSVSP----WNAIICGLAMHGD 502
++ G ++ A ++ + + P W A++ G +H D
Sbjct: 394 SRAGRLDEAEDLI-----NSMPIEPNVIVWGALLGGCRIHKD 430
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 102/350 (29%), Positives = 175/350 (50%), Gaps = 48/350 (13%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E S ++ C+ A++ G ++H+++ KSGL++N + SL+++Y K + A +FD
Sbjct: 113 EYIYTSLIKACAGLEAIADGLKVHAVVIKSGLDNNIHLGTSLVDMYFKFREPASAGQVFD 172
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
D V+ N M+SGY L AR VFD+ + +S+ +MI G+ QN + +A+EV
Sbjct: 173 EMPLRDVVSWNTMVSGYCLCGDLESARRVFDQMLERDVISWNAMIGGYVQNGKYSDAIEV 232
Query: 143 FRDM-RILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYC 201
F +M ++ GV+P++VTL SV+S+ H+G + R + V + + L++MY
Sbjct: 233 FHEMQKVGGVVPDDVTLVSVLSACAHVGALDFGRWIDRFVGWRGRGLNLYLGNALIDMYA 292
Query: 202 VCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDG 261
C ++ EAR +FD M+ER+++SW+ M+ G G +
Sbjct: 293 KCGTMEEARRIFDGMRERDVISWSTMICGSGTHGDAD----------------------- 329
Query: 262 YLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHS-------IIV 314
EA Y ML G+ PN+V + L+SAC A +G+++ S I+
Sbjct: 330 --------EAFGYYSKMLECGVKPNEVTFMGLLSACSHAGLVDKGIELFSRMIQEYRIVP 381
Query: 315 KAG-FDCYDFIQATIIHFYAACGRINLAR-LQFELGIKDHIASWNALIAG 362
K G + C +I + GR++ A L + I+ ++ W AL+ G
Sbjct: 382 KVGHYGC-------VIDLLSRAGRLDEAEDLINSMPIEPNVIVWGALLGG 424
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 121/283 (42%), Gaps = 38/283 (13%)
Query: 359 LIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVD--AGVK 416
LI N + A+ +F + +V+SW+A+I + AL F+ + +
Sbjct: 51 LIGACAANANLYHAQLIFAQLPNPNVFSWNAIIKAHINCGAWEHALNCFNRQLSLPSAPN 110
Query: 417 PNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAK---------- 466
PNE S+ A A + +G H V+ + + N +L +++DMY K
Sbjct: 111 PNEYIYTSLIKACAGLEAIADGLKVHAVVIKSGLDNNIHLGTSLVDMYFKFREPASAGQV 170
Query: 467 ---------------------CGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANL 505
CG + +A VF + +R V WNA+I G +G +
Sbjct: 171 FDEMPLRDVVSWNTMVSGYCLCGDLESARRVFDQMLER--DVISWNAMIGGYVQNGKYSD 228
Query: 506 TLKIYSDLEK-RNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCM 564
++++ +++K + + +T + VLS C H G +D G R+ +L +
Sbjct: 229 AIEVFHEMQKVGGVVPDDVTLVSVLSACAHVGALDFG-RWIDRFVGWRGRGLNLYLGNAL 287
Query: 565 VDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVE 607
+D+ + G +E+A + M + DV+ W T++ S HG+ +
Sbjct: 288 IDMYAKCGTMEEARRIFDGMRER-DVISWSTMICGSGTHGDAD 329
>gi|357116134|ref|XP_003559839.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04750,
mitochondrial-like [Brachypodium distachyon]
Length = 601
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 160/444 (36%), Positives = 253/444 (56%), Gaps = 8/444 (1%)
Query: 225 NVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIA 284
N ++ + AG E A +F+ +P DVVS M+ GY++ + AL ++R M I
Sbjct: 156 NSLIKMYLDAGDAETAEAMFQSVPVPDVVSCNIMLSGYVKGGCVVNALQLFRDMASREIG 215
Query: 285 PNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD---FIQATIIHFYAACGRINLA 341
+ V L+S CGR G +H ++V+ D D + ++ YA CG +N A
Sbjct: 216 VDQYAAVALLSCCGRLKNALLGRSVHGVVVRR-MDIKDRGLILSNALLDMYAKCGEMNTA 274
Query: 342 -RLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQP 400
R+ E KD I SWN +IAGF +GM++ A + F + RD+ SW+ +++GY + +
Sbjct: 275 MRVFGEAKEKDDI-SWNTMIAGFANDGMLDLASKFFFDAPCRDLISWNTLLAGYGRCREF 333
Query: 401 NMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAI 460
+ELF+ M+ + V+P+++T V++ A S G L G+ H +VL T + L++ +
Sbjct: 334 AAVMELFNDMLSSRVRPDKVTAVTLISAAVSKGALNLGKSVHGWVLKEHGTQDAFLASTL 393
Query: 461 IDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKL 520
+DMY KCG++ A+ VF D+ V+ W A+I GLA HG L ++ +++ +
Sbjct: 394 VDMYCKCGNVKLAYAVFEKALDK--DVTLWTAMISGLAFHGHGTEALDLFWNMQNEGVAP 451
Query: 521 NSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEV 580
N +T + VLS C HAGL+D G F +M+ +N+EP ++H+GCMVDLL R+G+L DA +
Sbjct: 452 NGVTLVTVLSACSHAGLLDEGCEIFYTMQKRFNIEPRVEHFGCMVDLLARSGRLSDAVGL 511
Query: 581 IRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRW 640
R MPMK IWG++L+ S N EV E A+K L L+P+ VLLSN+YA G+W
Sbjct: 512 ARMMPMKPSRSIWGSILSVSSSCQNTEVAEIASKELLRLEPTEEGGYVLLSNLYAAGGQW 571
Query: 641 EDAFSIRKEMRDCGMKRLPGFSGV 664
+ +R+ M G+++ G SG+
Sbjct: 572 NYSNKVRENMEMRGVRKSAGASGL 595
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 128/461 (27%), Positives = 212/461 (45%), Gaps = 72/461 (15%)
Query: 40 SQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGY 99
S G+Q+H+ + +GL S +++NSLI +Y G A++MF S D V+CNI
Sbjct: 134 SVGKQVHAHVLVNGLHSRVYLRNSLIKMYLDAGDAETAEAMFQSVPVPDVVSCNI----- 188
Query: 100 IRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDM--RILGVIPNEVT 157
M+ G+ + C AL++FRDM R +GV ++
Sbjct: 189 --------------------------MLSGYVKGGCVVNALQLFRDMASREIGV--DQYA 220
Query: 158 LASVISSSVHLGGIWECRMLHGLVIKLM--IDGFVIISTNLLNMYCVCSSLVEARSLFDE 215
+++S L R +HG+V++ M D +I+S LL+MY C + A +F E
Sbjct: 221 AVALLSCCGRLKNALLGRSVHGVVVRRMDIKDRGLILSNALLDMYAKCGEMNTAMRVFGE 280
Query: 216 MKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMY 275
KE++ +SWN M+ GFA G+++LA + F P +D++SW T++ GY + + + ++
Sbjct: 281 AKEKDDISWNTMIAGFANDGMLDLASKFFFDAPCRDLISWNTLLAGYGRCREFAAVMELF 340
Query: 276 RAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAAC 335
ML + P+ V V LISA A G +H ++K F+ +T++ Y C
Sbjct: 341 NDMLSSRVRPDKVTAVTLISAAVSKGALNLGKSVHGWVLKEHGTQDAFLASTLVDMYCKC 400
Query: 336 GRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYA 395
G + LA FE + + W A+I+G +G +A LF NM
Sbjct: 401 GNVKLAYAVFEKALDKDVTLWTAMISGLAFHGHGTEALDLFWNM---------------- 444
Query: 396 QNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDN 455
QNE GV PN +T+V+V A + +G L EG Y + +
Sbjct: 445 QNE---------------GVAPNGVTLVTVLSACSHAGLLDEGCEIF-YTMQKRFNIEPR 488
Query: 456 LS--AAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAII 494
+ ++D+ A+ G ++ A + + S S W +I+
Sbjct: 489 VEHFGCMVDLLARSGRLSDAVGL-ARMMPMKPSRSIWGSIL 528
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 144/295 (48%), Gaps = 33/295 (11%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSG--LESNTFIQNSLINLYAKCGLISQAKSM 80
+ A V+ L C G+ +H ++ + + + N+L+++YAKCG ++ A +
Sbjct: 218 QYAAVALLSCCGRLKNALLGRSVHGVVVRRMDIKDRGLILSNALLDMYAKCGEMNTAMRV 277
Query: 81 FDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREAL 140
F D ++ N MI+G+ + L+ A + F P + +S+ +++ G+ + + +
Sbjct: 278 FGEAKEKDDISWNTMIAGFANDGMLDLASKFFFDAPCRDLISWNTLLAGYGRCREFAAVM 337
Query: 141 EVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMY 200
E+F DM V P++VT ++IS++V G + + +HG V+K +++ L++MY
Sbjct: 338 ELFNDMLSSRVRPDKVTAVTLISAAVSKGALNLGKSVHGWVLKEHGTQDAFLASTLVDMY 397
Query: 201 CVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMID 260
C C ++ A ++F++ ++++ W M++G A G GT
Sbjct: 398 CKCGNVKLAYAVFEKALDKDVTLWTAMISGLAFHG-------------------HGT--- 435
Query: 261 GYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVK 315
EAL ++ M +G+APN V +V ++SAC A EG +I + K
Sbjct: 436 ---------EALDLFWNMQNEGVAPNGVTLVTVLSACSHAGLLDEGCEIFYTMQK 481
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 74/368 (20%), Positives = 149/368 (40%), Gaps = 73/368 (19%)
Query: 272 LTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHF 331
+ +Y++ML +P++ + L+ + G A G Q+H+ ++ G +++ ++I
Sbjct: 105 VALYKSMLASSASPDEKTFLSLLKSVGCASV---GKQVHAHVLVNGLHSRVYLRNSLIKM 161
Query: 332 YAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMI 391
Y G A F+ + S N +++G+++ G + +A QLF +M R++
Sbjct: 162 YLDAGDAETAEAMFQSVPVPDVVSCNIMLSGYVKGGCVVNALQLFRDMASREI------- 214
Query: 392 SGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSIT 451
GV + C + L GR H V+ +
Sbjct: 215 ----------------------GVDQYAAVALLSCCGRLKNALL--GRSVHGVVVRR-MD 249
Query: 452 LNDN---LSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLT-- 506
+ D LS A++DMYAKCG +NTA VF +++ WN +I G A G +L
Sbjct: 250 IKDRGLILSNALLDMYAKCGEMNTAMRVFGEAKEKDD--ISWNTMIAGFANDGMLDLASK 307
Query: 507 -----------------------------LKIYSDLEKRNIKLNSITFIGVLSTCCHAGL 537
+++++D+ ++ + +T + ++S G
Sbjct: 308 FFFDAPCRDLISWNTLLAGYGRCREFAAVMELFNDMLSSRVRPDKVTAVTLISAAVSKGA 367
Query: 538 VDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLL 597
++LG+ + + + D +VD+ + G ++ A V + DV +W ++
Sbjct: 368 LNLGKSVHGWVLKEHGTQ-DAFLASTLVDMYCKCGNVKLAYAVFEK-ALDKDVTLWTAMI 425
Query: 598 AASRIHGN 605
+ HG+
Sbjct: 426 SGLAFHGH 433
>gi|125552488|gb|EAY98197.1| hypothetical protein OsI_20110 [Oryza sativa Indica Group]
Length = 551
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 159/434 (36%), Positives = 251/434 (57%), Gaps = 10/434 (2%)
Query: 237 VELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAML-C-----DGIAPNDVMI 290
V A +F ++ ++ MI Y Q + +A+ +Y ML C DG A D
Sbjct: 62 VTHAARVFAQVRDPNLHLHNAMIKAYAQNHQHRDAVAVYIRMLRCPTSPPDGHAGGDRFT 121
Query: 291 VD-LISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGI 349
L+ ACG A G Q+H+ +V++G D +Q ++I Y G + LA F+
Sbjct: 122 YPFLLKACGGTAALELGKQVHTHVVRSGCDSSAIVQNSLIEMYTRAGDLALAHKVFDEMR 181
Query: 350 KDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHG 409
+ + SWN LI+ R G + A LFN+M + + +W+AM+SGY A++ F
Sbjct: 182 ERDVVSWNMLISAHARLGQMRKATALFNSMPDKTIVTWTAMVSGYTTVGDYPGAVDAFRS 241
Query: 410 MVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGS 469
M G +P+++++V+V A A G L+ GRW + Y + + + ++ A+++MYAKCG
Sbjct: 242 MQTEGFEPDDVSIVAVLPACAQLGALELGRWIYAYCKRHGMLTSTHICNALMEMYAKCGC 301
Query: 470 INTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKR-NIKLNSITFIGV 528
I+ A ++F + D+ V W+ +I GLA HG A+ + +++++EK ++ N ITF+G+
Sbjct: 302 IDQALQLFDGMADK--DVISWSTVIGGLAAHGRAHEAVWLFTEMEKEGKVRPNVITFVGL 359
Query: 529 LSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKA 588
LS C +AGLVD G +F M VY VEP ++HYGC+VDLLGR+GQ+ A +++R MP+ A
Sbjct: 360 LSACSYAGLVDEGLSHFDRMNDVYGVEPGVEHYGCVVDLLGRSGQIRRALDLVRDMPVPA 419
Query: 589 DVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRK 648
D +WG+LL+A R HG+V+ AA+ L L+P + V+L+N+YA A RW D S RK
Sbjct: 420 DAKVWGSLLSACRSHGDVDTAVLAAERLVELEPDDVGNLVMLANVYAAARRWSDVASTRK 479
Query: 649 EMRDCGMKRLPGFS 662
+R M++ PG S
Sbjct: 480 AIRSRSMRKTPGCS 493
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 106/413 (25%), Positives = 184/413 (44%), Gaps = 47/413 (11%)
Query: 104 RLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF-RDMRILGVIPN------EV 156
R+ A VF + + +MI +AQN R+A+ V+ R +R P+
Sbjct: 61 RVTHAARVFAQVRDPNLHLHNAMIKAYAQNHQHRDAVAVYIRMLRCPTSPPDGHAGGDRF 120
Query: 157 TLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEM 216
T ++ + + + +H V++ D I+ +L+ MY L A +FDEM
Sbjct: 121 TYPFLLKACGGTAALELGKQVHTHVVRSGCDSSAIVQNSLIEMYTRAGDLALAHKVFDEM 180
Query: 217 KERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYR 276
+ER++VSWN++++ A+ G + A LF +P K +V+W M+ GY V A+ +R
Sbjct: 181 RERDVVSWNMLISAHARLGQMRKATALFNSMPDKTIVTWTAMVSGYTTVGDYPGAVDAFR 240
Query: 277 AMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACG 336
+M +G P+DV IV ++ AC + A G I++ + G I ++ YA CG
Sbjct: 241 SMQTEGFEPDDVSIVAVLPACAQLGALELGRWIYAYCKRHGMLTSTHICNALMEMYAKCG 300
Query: 337 RINLARLQFELGIKDH-IASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYA 395
I+ A LQ G+ D + SW+ +I G +G +A LF M+K
Sbjct: 301 CIDQA-LQLFDGMADKDVISWSTVIGGLAAHGRAHEAVWLFTEMEK-------------- 345
Query: 396 QNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDN 455
+ V+PN IT V + A + +G + EG +H +N+ +
Sbjct: 346 ----------------EGKVRPNVITFVGLLSACSYAGLVDEG-LSHFDRMNDVYGVEPG 388
Query: 456 LS--AAIIDMYAKCGSINTAFEVFYHIRDRTTSVSP--WNAIICGLAMHGDAN 504
+ ++D+ + G I A ++ +RD W +++ HGD +
Sbjct: 389 VEHYGCVVDLLGRSGQIRRALDL---VRDMPVPADAKVWGSLLSACRSHGDVD 438
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 137/279 (49%), Gaps = 32/279 (11%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
L+ C A+ G+Q+H+ + +SG +S+ +QNSLI +Y + G ++ A +FD D
Sbjct: 126 LKACGGTAALELGKQVHTHVVRSGCDSSAIVQNSLIEMYTRAGDLALAHKVFDEMRERDV 185
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
V+ N++IS + R ++ A +F+ P K V++T+M+ G+ + A++ FR M+
Sbjct: 186 VSWNMLISAHARLGQMRKATALFNSMPDKTIVTWTAMVSGYTTVGDYPGAVDAFRSMQTE 245
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
G P++V++ +V+ + LG + R ++ + + I L+ MY C + +A
Sbjct: 246 GFEPDDVSIVAVLPACAQLGALELGRWIYAYCKRHGMLTSTHICNALMEMYAKCGCIDQA 305
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLS 269
LFD M +++++SW+ ++ G A G R
Sbjct: 306 LQLFDGMADKDVISWSTVIGGLAAHG-------------------------------RAH 334
Query: 270 EALTMYRAMLCDG-IAPNDVMIVDLISACGRAMAFGEGL 307
EA+ ++ M +G + PN + V L+SAC A EGL
Sbjct: 335 EAVWLFTEMEKEGKVRPNVITFVGLLSACSYAGLVDEGL 373
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 56/334 (16%), Positives = 123/334 (36%), Gaps = 55/334 (16%)
Query: 301 MAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALI 360
+ F + L++H +V+ ++ I+H A R+ A F ++ NA+I
Sbjct: 25 VTFRDLLRVHGHVVRLRISQSSYLATQIVHLCNAHRRVTHAARVFAQVRDPNLHLHNAMI 84
Query: 361 AGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEI 420
+ +N DA ++ M + P D +
Sbjct: 85 KAYAQNHQHRDAVAVYIRMLR-------------CPTSPP-----------DGHAGGDRF 120
Query: 421 TMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHI 480
T + A + L+ G+ H +V+ + + + ++I+MY + G + A +VF +
Sbjct: 121 TYPFLLKACGGTAALELGKQVHTHVVRSGCDSSAIVQNSLIEMYTRAGDLALAHKVFDEM 180
Query: 481 RDRTT-----------------------------SVSPWNAIICGLAMHGDANLTLKIYS 511
R+R ++ W A++ G GD + +
Sbjct: 181 RERDVVSWNMLISAHARLGQMRKATALFNSMPDKTIVTWTAMVSGYTTVGDYPGAVDAFR 240
Query: 512 DLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRA 571
++ + + ++ + VL C G ++LG R+ + + + ++++ +
Sbjct: 241 SMQTEGFEPDDVSIVAVLPACAQLGALELG-RWIYAYCKRHGMLTSTHICNALMEMYAKC 299
Query: 572 GQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGN 605
G ++ A ++ M K DV+ W T++ HG
Sbjct: 300 GCIDQALQLFDGMADK-DVISWSTVIGGLAAHGR 332
Score = 52.4 bits (124), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 58/100 (58%), Gaps = 3/100 (3%)
Query: 16 NLQNSDYE---LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCG 72
++Q +E +++V+ L C+ A+ G+ I++ + G+ ++T I N+L+ +YAKCG
Sbjct: 241 SMQTEGFEPDDVSIVAVLPACAQLGALELGRWIYAYCKRHGMLTSTHICNALMEMYAKCG 300
Query: 73 LISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVF 112
I QA +FD + D ++ + +I G + R ++A +F
Sbjct: 301 CIDQALQLFDGMADKDVISWSTVIGGLAAHGRAHEAVWLF 340
>gi|224145066|ref|XP_002325515.1| predicted protein [Populus trichocarpa]
gi|222862390|gb|EEE99896.1| predicted protein [Populus trichocarpa]
Length = 683
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 187/654 (28%), Positives = 326/654 (49%), Gaps = 73/654 (11%)
Query: 15 ANLQNSDYELALVSALRY-CSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGL 73
A+ N D L +S+L Y C+ ++ QG+Q+H+ G E++ + L+ Y+ L
Sbjct: 32 ASSANRDAILHSISSLLYSCTNLKSLPQGKQLHAHTISLGFENHLVLVPKLVTFYSSFSL 91
Query: 74 ISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQN 133
++ A ++ + ++P+ N++IS Y+ N + G
Sbjct: 92 LADAHTITVNSDIVNPLPWNLLISSYVNNG-----------------------LHG---- 124
Query: 134 DCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGF-VII 192
EAL +R+M GV P+ T SV+ + + R +H + + + +
Sbjct: 125 ----EALSAYREMVHKGVRPDNFTYPSVLKACGEKLDLDFGREVHESINAAYGHRWNLYV 180
Query: 193 STNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERI----P 248
+L++MY L AR LF++M ER+ VSWN +++ +A GL + A ELFE +
Sbjct: 181 HNSLVSMYGKFGELDAARRLFNQMPERDAVSWNGIISNYASRGLWKEAFELFEEMRLAGA 240
Query: 249 SKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQ 308
++++W T+ G +Q AL + M I + V ++ + AC A G
Sbjct: 241 EVNIITWNTIAGGCVQTRNFKGALELLSQMRRCDIDLDPVAMIIGLGACSHIGAIKLGTV 300
Query: 309 IHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGM 368
IH+ +++ FD +D ++ +I Y+ C KD
Sbjct: 301 IHASAIRSCFDGFDNVRNALITMYSRC--------------KD----------------- 329
Query: 369 IEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCA 428
+ A LF +++ + + +W++M+SGY ++ A LF M+ +G++PN +T+ S+
Sbjct: 330 LRHADILFKSIKTKSLTTWNSMLSGYTHMDRSEEASFLFREMLFSGIEPNYVTIASILPH 389
Query: 429 IASSGTLKEGRWAHEYVLNNSITLNDNLSA--AIIDMYAKCGSINTAFEVFYHIRDRTTS 486
A L++G+ H Y++ D L ++++MYA+ G + +A VF +R R
Sbjct: 390 CARVANLQQGKEFHCYIMRRE-GFEDYLLLWNSLVEMYARSGKVLSAKRVFDSLRRRDKV 448
Query: 487 VSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFK 546
+ ++I G + G+ LK++ ++ K IK + +T + VLS C H+GLV G F+
Sbjct: 449 T--YTSLIAGYGIQGEGKTALKLFDEMIKHRIKPDQVTMVAVLSACSHSGLVTEGNVLFE 506
Query: 547 SMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNV 606
M ++Y + P ++H+ CMVDL GRAG L A++VI SMP + +W TL+ A RIHGN
Sbjct: 507 KMSTLYGIVPAVEHFSCMVDLFGRAGLLNKAKKVITSMPYRPTTAMWATLVGACRIHGNT 566
Query: 607 EVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPG 660
E+GE AA+ L ++P + VL++N++A AGRW +R MRD G+++ PG
Sbjct: 567 EIGEWAAEKLLEMKPENPGYYVLIANMHAAAGRWSKLAEVRTYMRDLGVRKAPG 620
>gi|356495733|ref|XP_003516728.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20770-like [Glycine max]
Length = 770
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 180/687 (26%), Positives = 325/687 (47%), Gaps = 113/687 (16%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
+ + C + + G++ H ++ K GLESN ++ N+L+ +YAKCGL +
Sbjct: 138 HITFATVFSACGSLLDADCGRRTHGVVIKVGLESNIYVVNALLCMYAKCGLNA------- 190
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
DA VF P V++T+M+ G AQ + +EA E+
Sbjct: 191 ------------------------DALRVFRDIPEPNEVTFTTMMGGLAQTNQIKEAAEL 226
Query: 143 FRDMRILGVIPNEVTLASVISSSVH----------LGGIWECRMLHGLVIKLMIDGFVII 192
FR M G+ + V+L+S++ + + + +H L +KL + + +
Sbjct: 227 FRLMLRKGIRVDSVSLSSMLGVCAKGERDVGPCHGISTNAQGKQMHTLSVKLGFERDLHL 286
Query: 193 STNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFA-------------------- 232
+LL+MY + A +F + ++VSWN+M+ G+
Sbjct: 287 CNSLLDMYAKIGDMDSAEKVFVNLNRHSVVSWNIMIAGYGNRCNSEKAAEYLQRMQSDGY 346
Query: 233 ---------------KAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRA 277
K+G V R++F+ +P + SW ++ GY Q EA+ ++R
Sbjct: 347 EPDDVTYINMLTACVKSGDVRTGRQIFDCMPCPSLTSWNAILSGYNQNADHREAVELFRK 406
Query: 278 MLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD--FIQATIIHFYAAC 335
M P+ + ++S+C G ++H+ K GF YD ++ +++I+ Y+ C
Sbjct: 407 MQFQCQHPDRTTLAVILSSCAELGFLEAGKEVHAASQKFGF--YDDVYVASSLINVYSKC 464
Query: 336 GRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYA 395
G++ L+ + +F+ + + DV W++M++G++
Sbjct: 465 GKMELS-------------------------------KHVFSKLPELDVVCWNSMLAGFS 493
Query: 396 QNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDN 455
N AL F M G P+E + +V + A +L +G+ H ++ + +
Sbjct: 494 INSLGQDALSFFKKMRQLGFFPSEFSFATVVSSCAKLSSLFQGQQFHAQIVKDGFLDDIF 553
Query: 456 LSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEK 515
+ +++I+MY KCG +N A F+ + +V+ WN +I G A +GD + L +Y+D+
Sbjct: 554 VGSSLIEMYCKCGDVNGA-RCFFDVMPGRNTVT-WNEMIHGYAQNGDGHNALCLYNDMIS 611
Query: 516 RNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLE 575
K + IT++ VL+ C H+ LVD G F +M Y V P + HY C++D L RAG+
Sbjct: 612 SGEKPDDITYVAVLTACSHSALVDEGLEIFNAMLQKYGVVPKVAHYTCIIDCLSRAGRFN 671
Query: 576 DAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYA 635
+ E ++ +MP K D V+W +L++ RIH N+ + +RAA+ L L P + S VLL+N+Y+
Sbjct: 672 EVEVILDAMPCKDDAVVWEVVLSSCRIHANLSLAKRAAEELYRLDPQNSASYVLLANMYS 731
Query: 636 DAGRWEDAFSIRKEMRDCGMKRLPGFS 662
G+W+DA +R M +++ PG+S
Sbjct: 732 SLGKWDDAHVVRDLMSHNQVRKDPGYS 758
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 147/626 (23%), Positives = 282/626 (45%), Gaps = 73/626 (11%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
L L + +++C + A G+ +H+ +F+ L S+TF+ N I LY+KC I+ A +FD+
Sbjct: 7 LNLANLVQHCITNKAHLSGKVVHARLFRLALFSDTFLSNHFIELYSKCDHIASACHVFDN 66
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
+ + N +++ Y + L A +F + P + VS ++I + R+AL+ +
Sbjct: 67 IPHKNIFSWNAILAAYCKARNLQYACRLFLQMPQRNTVSLNTLISTMVRCGYERQALDTY 126
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
+ + GVIP+ +T A+V S+ L R HG+VIK+ ++ + + LL MY C
Sbjct: 127 DSVMLDGVIPSHITFATVFSACGSLLDADCGRRTHGVVIKVGLESNIYVVNALLCMYAKC 186
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSK----DVVSWGTMI 259
+A +F ++ E N V++ M+ G A+ ++ A ELF + K D VS +M+
Sbjct: 187 GLNADALRVFRDIPEPNEVTFTTMMGGLAQTNQIKEAAELFRLMLRKGIRVDSVSLSSML 246
Query: 260 DGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFD 319
+ ER C GI+ N +G Q+H++ VK GF+
Sbjct: 247 GVCAKGER--------DVGPCHGISTN-----------------AQGKQMHTLSVKLGFE 281
Query: 320 CYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGF---------------- 363
+ +++ YA G ++ A F + + SWN +IAG+
Sbjct: 282 RDLHLCNSLLDMYAKIGDMDSAEKVFVNLNRHSVVSWNIMIAGYGNRCNSEKAAEYLQRM 341
Query: 364 -------------------IRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMAL 404
+++G + RQ+F+ M + SW+A++SGY QN A+
Sbjct: 342 QSDGYEPDDVTYINMLTACVKSGDVRTGRQIFDCMPCPSLTSWNAILSGYNQNADHREAV 401
Query: 405 ELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMY 464
ELF M P+ T+ + + A G L+ G+ H + +++++I++Y
Sbjct: 402 ELFRKMQFQCQHPDRTTLAVILSSCAELGFLEAGKEVHAASQKFGFYDDVYVASSLINVY 461
Query: 465 AKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSIT 524
+KCG + + VF + + V WN+++ G +++ L + + + + +
Sbjct: 462 SKCGKMELSKHVFSKLPE--LDVVCWNSMLAGFSINSLGQDALSFFKKMRQLGFFPSEFS 519
Query: 525 FIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSM 584
F V+S+C + G+++ + ++ D+ ++++ + G + A M
Sbjct: 520 FATVVSSCAKLSSLFQGQQFHAQIVKDGFLD-DIFVGSSLIEMYCKCGDVNGARCFFDVM 578
Query: 585 PMKADVVIWGTLLAASRIHGNVEVGE 610
P + + V W + IHG + G+
Sbjct: 579 PGR-NTVTWNEM-----IHGYAQNGD 598
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 95/365 (26%), Positives = 161/365 (44%), Gaps = 73/365 (20%)
Query: 4 DHFHSV--FNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQ 61
DH +V F + Q+ D L L C+ + G+++H+ K G + ++
Sbjct: 396 DHREAVELFRKMQFQCQHPD-RTTLAVILSSCAELGFLEAGKEVHAASQKFGFYDDVYVA 454
Query: 62 NSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCV 121
+SLIN+Y+KCG + +K +F LD V N M++
Sbjct: 455 SSLINVYSKCGKMELSKHVFSKLPELDVVCWNSMLA------------------------ 490
Query: 122 SYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLV 181
GF+ N ++AL F+ MR LG P+E + A+V+SS L +++ + H +
Sbjct: 491 -------GFSINSLGQDALSFFKKMRQLGFFPSEFSFATVVSSCAKLSSLFQGQQFHAQI 543
Query: 182 IKLMIDGF---VIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVE 238
+K DGF + + ++L+ MYC C + AR FD M RN V+WN M++G+A+ G
Sbjct: 544 VK---DGFLDDIFVGSSLIEMYCKCGDVNGARCFFDVMPGRNTVTWNEMIHGYAQNG--- 597
Query: 239 LARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACG 298
DG+ AL +Y M+ G P+D+ V +++AC
Sbjct: 598 ---------------------DGH-------NALCLYNDMISSGEKPDDITYVAVLTACS 629
Query: 299 RAMAFGEGLQI-HSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFE-LGIKDHIASW 356
+ EGL+I ++++ K G II + GR N + + + KD W
Sbjct: 630 HSALVDEGLEIFNAMLQKYGVVPKVAHYTCIIDCLSRAGRFNEVEVILDAMPCKDDAVVW 689
Query: 357 NALIA 361
+++
Sbjct: 690 EVVLS 694
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 88/374 (23%), Positives = 164/374 (43%), Gaps = 17/374 (4%)
Query: 290 IVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGI 349
+ +L+ C A G +H+ + + F+ I Y+ C I A F+
Sbjct: 9 LANLVQHCITNKAHLSGKVVHARLFRLALFSDTFLSNHFIELYSKCDHIASACHVFDNIP 68
Query: 350 KDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHG 409
+I SWNA++A + + ++ A +LF M +R+ S + +IS + AL+ +
Sbjct: 69 HKNIFSWNAILAAYCKARNLQYACRLFLQMPQRNTVSLNTLISTMVRCGYERQALDTYDS 128
Query: 410 MVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGS 469
++ GV P+ IT +VF A S GR H V+ + N + A++ MYAKCG
Sbjct: 129 VMLDGVIPSHITFATVFSACGSLLDADCGRRTHGVVIKVGLESNIYVVNALLCMYAKCGL 188
Query: 470 INTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVL 529
A VF I + + ++ GLA +++ + ++ I+++S++ +L
Sbjct: 189 NADALRVFRDIPEPNEVT--FTTMMGGLAQTNQIKEAAELFRLMLRKGIRVDSVSLSSML 246
Query: 530 STC---------CHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEV 580
C CH + + ++ E DL ++D+ + G ++ AE+V
Sbjct: 247 GVCAKGERDVGPCHGISTNAQGKQMHTLSVKLGFERDLHLCNSLLDMYAKIGDMDSAEKV 306
Query: 581 IRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPS-HGPSRVLLSNIYADAGR 639
++ + VV W ++A +GN E+AA+ L +Q + P V N+ +
Sbjct: 307 FVNLN-RHSVVSWNIMIAG---YGNRCNSEKAAEYLQRMQSDGYEPDDVTYINMLTACVK 362
Query: 640 WEDAFSIRKEMRDC 653
D + R ++ DC
Sbjct: 363 SGDVRTGR-QIFDC 375
>gi|297724167|ref|NP_001174447.1| Os05g0439300 [Oryza sativa Japonica Group]
gi|46981301|gb|AAT07619.1| putative pentatricopeptide repeat-containing protein [Oryza sativa
Japonica Group]
gi|215769333|dbj|BAH01562.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255676403|dbj|BAH93175.1| Os05g0439300 [Oryza sativa Japonica Group]
Length = 551
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 159/434 (36%), Positives = 251/434 (57%), Gaps = 10/434 (2%)
Query: 237 VELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAML-C-----DGIAPNDVMI 290
V A +F ++ ++ MI Y Q + +A+ +Y ML C DG A D
Sbjct: 62 VTHAARVFAQVRDPNLHLHNAMIKAYAQNHQHRDAVAVYIRMLRCPTSPPDGHAGGDRFT 121
Query: 291 VD-LISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGI 349
L+ ACG A G Q+H+ +V++G D +Q ++I Y G + LA F+
Sbjct: 122 YPFLLKACGGTAALELGKQVHTHVVRSGCDSSAIVQNSLIEMYTRAGDLALAHKVFDEMR 181
Query: 350 KDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHG 409
+ + SWN LI+ R G + A LFN+M + + +W+AM+SGY A++ F
Sbjct: 182 ERDVVSWNMLISAHARLGQMRKATALFNSMPDKTIVTWTAMVSGYTTVGDYPGAVDAFRS 241
Query: 410 MVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGS 469
M G +P+++++V+V A A G L+ GRW + Y + + + ++ A+++MYAKCG
Sbjct: 242 MQTEGFEPDDVSIVAVLPACAQLGALELGRWIYAYCKRHGMLTSTHICNALMEMYAKCGC 301
Query: 470 INTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKR-NIKLNSITFIGV 528
I+ A ++F + D+ V W+ +I GLA HG A+ + +++++EK ++ N ITF+G+
Sbjct: 302 IDQALQLFDGMADK--DVISWSTVIGGLAAHGRAHEAVWLFTEMEKEGKVRPNVITFVGL 359
Query: 529 LSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKA 588
LS C +AGLVD G +F M VY VEP ++HYGC+VDLLGR+GQ+ A +++R MP+ A
Sbjct: 360 LSACSYAGLVDEGLSHFDRMNDVYGVEPGVEHYGCVVDLLGRSGQIRRALDLVRDMPVPA 419
Query: 589 DVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRK 648
D +WG+LL+A R HG+V+ AA+ L L+P + V+L+N+YA A RW D S RK
Sbjct: 420 DAKVWGSLLSACRSHGDVDTAVLAAERLVELEPDDVGNLVMLANVYAAARRWSDVASTRK 479
Query: 649 EMRDCGMKRLPGFS 662
+R M++ PG S
Sbjct: 480 AIRSRSMRKTPGCS 493
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 106/413 (25%), Positives = 184/413 (44%), Gaps = 47/413 (11%)
Query: 104 RLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF-RDMRILGVIPN------EV 156
R+ A VF + + +MI +AQN R+A+ V+ R +R P+
Sbjct: 61 RVTHAARVFAQVRDPNLHLHNAMIKAYAQNHQHRDAVAVYIRMLRCPTSPPDGHAGGDRF 120
Query: 157 TLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEM 216
T ++ + + + +H V++ D I+ +L+ MY L A +FDEM
Sbjct: 121 TYPFLLKACGGTAALELGKQVHTHVVRSGCDSSAIVQNSLIEMYTRAGDLALAHKVFDEM 180
Query: 217 KERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYR 276
+ER++VSWN++++ A+ G + A LF +P K +V+W M+ GY V A+ +R
Sbjct: 181 RERDVVSWNMLISAHARLGQMRKATALFNSMPDKTIVTWTAMVSGYTTVGDYPGAVDAFR 240
Query: 277 AMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACG 336
+M +G P+DV IV ++ AC + A G I++ + G I ++ YA CG
Sbjct: 241 SMQTEGFEPDDVSIVAVLPACAQLGALELGRWIYAYCKRHGMLTSTHICNALMEMYAKCG 300
Query: 337 RINLARLQFELGIKDH-IASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYA 395
I+ A LQ G+ D + SW+ +I G +G +A LF M+K
Sbjct: 301 CIDQA-LQLFDGMADKDVISWSTVIGGLAAHGRAHEAVWLFTEMEK-------------- 345
Query: 396 QNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDN 455
+ V+PN IT V + A + +G + EG +H +N+ +
Sbjct: 346 ----------------EGKVRPNVITFVGLLSACSYAGLVDEG-LSHFDRMNDVYGVEPG 388
Query: 456 LS--AAIIDMYAKCGSINTAFEVFYHIRDRTTSVSP--WNAIICGLAMHGDAN 504
+ ++D+ + G I A ++ +RD W +++ HGD +
Sbjct: 389 VEHYGCVVDLLGRSGQIRRALDL---VRDMPVPADAKVWGSLLSACRSHGDVD 438
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 137/279 (49%), Gaps = 32/279 (11%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
L+ C A+ G+Q+H+ + +SG +S+ +QNSLI +Y + G ++ A +FD D
Sbjct: 126 LKACGGTAALELGKQVHTHVVRSGCDSSAIVQNSLIEMYTRAGDLALAHKVFDEMRERDV 185
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
V+ N++IS + R ++ A +F+ P K V++T+M+ G+ + A++ FR M+
Sbjct: 186 VSWNMLISAHARLGQMRKATALFNSMPDKTIVTWTAMVSGYTTVGDYPGAVDAFRSMQTE 245
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
G P++V++ +V+ + LG + R ++ + + I L+ MY C + +A
Sbjct: 246 GFEPDDVSIVAVLPACAQLGALELGRWIYAYCKRHGMLTSTHICNALMEMYAKCGCIDQA 305
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLS 269
LFD M +++++SW+ ++ G A G R
Sbjct: 306 LQLFDGMADKDVISWSTVIGGLAAHG-------------------------------RAH 334
Query: 270 EALTMYRAMLCDG-IAPNDVMIVDLISACGRAMAFGEGL 307
EA+ ++ M +G + PN + V L+SAC A EGL
Sbjct: 335 EAVWLFTEMEKEGKVRPNVITFVGLLSACSYAGLVDEGL 373
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 56/334 (16%), Positives = 123/334 (36%), Gaps = 55/334 (16%)
Query: 301 MAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALI 360
+ F + L++H +V+ ++ I+H A R+ A F ++ NA+I
Sbjct: 25 VTFRDLLRVHGHVVRLRISQSSYLATQIVHLCNAHRRVTHAARVFAQVRDPNLHLHNAMI 84
Query: 361 AGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEI 420
+ +N DA ++ M + P D +
Sbjct: 85 KAYAQNHQHRDAVAVYIRMLR-------------CPTSPP-----------DGHAGGDRF 120
Query: 421 TMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHI 480
T + A + L+ G+ H +V+ + + + ++I+MY + G + A +VF +
Sbjct: 121 TYPFLLKACGGTAALELGKQVHTHVVRSGCDSSAIVQNSLIEMYTRAGDLALAHKVFDEM 180
Query: 481 RDRTT-----------------------------SVSPWNAIICGLAMHGDANLTLKIYS 511
R+R ++ W A++ G GD + +
Sbjct: 181 RERDVVSWNMLISAHARLGQMRKATALFNSMPDKTIVTWTAMVSGYTTVGDYPGAVDAFR 240
Query: 512 DLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRA 571
++ + + ++ + VL C G ++LG R+ + + + ++++ +
Sbjct: 241 SMQTEGFEPDDVSIVAVLPACAQLGALELG-RWIYAYCKRHGMLTSTHICNALMEMYAKC 299
Query: 572 GQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGN 605
G ++ A ++ M K DV+ W T++ HG
Sbjct: 300 GCIDQALQLFDGMADK-DVISWSTVIGGLAAHGR 332
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 58/100 (58%), Gaps = 3/100 (3%)
Query: 16 NLQNSDYE---LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCG 72
++Q +E +++V+ L C+ A+ G+ I++ + G+ ++T I N+L+ +YAKCG
Sbjct: 241 SMQTEGFEPDDVSIVAVLPACAQLGALELGRWIYAYCKRHGMLTSTHICNALMEMYAKCG 300
Query: 73 LISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVF 112
I QA +FD + D ++ + +I G + R ++A +F
Sbjct: 301 CIDQALQLFDGMADKDVISWSTVIGGLAAHGRAHEAVWLF 340
>gi|297830544|ref|XP_002883154.1| hypothetical protein ARALYDRAFT_479395 [Arabidopsis lyrata subsp.
lyrata]
gi|297328994|gb|EFH59413.1| hypothetical protein ARALYDRAFT_479395 [Arabidopsis lyrata subsp.
lyrata]
Length = 614
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 173/606 (28%), Positives = 323/606 (53%), Gaps = 12/606 (1%)
Query: 46 HSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRL 105
H K+G T N L+NLY+K GL+ +A+++FD + + N +I+ Y++ + +
Sbjct: 11 HIRSIKTGSTLTTISSNQLVNLYSKNGLLREARNVFDEMPERNVYSWNAVIAAYVKFNNV 70
Query: 106 NDAREVFDKTPI-KCCVSYTSMIMGFAQND-CWREALEVFRDMRILG---VIPNEVTLAS 160
+ARE+F + + ++Y +++ GFA+ D C EA+++F +M + ++ ++ +
Sbjct: 71 KEARELFKRDNCERDLITYNTLLSGFAKTDGCESEAIKMFGEMHRKEKDEIWIDDFSVTT 130
Query: 161 VISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDE--MKE 218
++ S L ++ LHG+++K D ++L++MY C E ++F+ ++
Sbjct: 131 MVKLSAKLTNVFYGEQLHGVMVKTGNDATKFSVSSLIHMYSKCGKFKEVCNVFNGSCVEF 190
Query: 219 RNIVSWNVMLNGFAKAGLVELARELFERIPS-KDVVSWGTMIDGYLQVERLSEALTMYRA 277
+ V+ N M+ + + G ++ A +F R P D +SW T+I GY Q EAL + +
Sbjct: 191 VDSVARNAMIAAYCREGDIDKALSIFWRNPELNDTISWNTLISGYAQNGYEEEALKIAVS 250
Query: 278 MLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGR 337
M G+ ++ +++ + G ++H+ ++K G F+ + I+ Y CG
Sbjct: 251 MEESGLKWDEHTFAAVLNVLSSLKSLKIGKEVHARLLKNGSYSNKFVSSGIVDVYCKCGN 310
Query: 338 INLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQN 397
+ A L ++ S +++I G+ G + +A++LF+++ ++++ W+AM GY
Sbjct: 311 MKYAESAHLLYGFGNLYSTSSMIVGYSSQGKMGEAKRLFDSLSEKNLVVWTAMFLGYLNL 370
Query: 398 EQPNMALELFHGMVDAGVK-PNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNL 456
QP+ LEL + P+ + MVSV A + ++ G+ H + L I ++ L
Sbjct: 371 RQPDSVLELARDFIANETNVPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKL 430
Query: 457 SAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKR 516
A +DMY+KCG++ A +F +R T + +N +I G A HG + +++ D+ +
Sbjct: 431 VTAFVDMYSKCGNVEYAERIFDISFERDTVM--YNTMIAGYAHHGHEAKSFQLFEDMTEG 488
Query: 517 NIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLED 576
K + ITF+ +LS C H GLV GE+YFKSM YN+ P+ HY CM+DL G+A +L+
Sbjct: 489 GFKPDEITFMALLSACRHRGLVLAGEKYFKSMIEAYNISPEAGHYTCMIDLYGKANRLDK 548
Query: 577 AEEVIRSM-PMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYA 635
A E++ + ++ D VI G L A + N E+ + + L ++ S+G + L+N YA
Sbjct: 549 AIELMEGIDQVEKDAVILGAFLNACSWNKNTELVKEVEEKLLAIEGSNGSRYIQLANAYA 608
Query: 636 DAGRWE 641
+GRW+
Sbjct: 609 SSGRWD 614
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 106/459 (23%), Positives = 214/459 (46%), Gaps = 36/459 (7%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
+ ++ + ++ + V G+Q+H ++ K+G ++ F +SLI++Y+KCG + ++F+
Sbjct: 125 DFSVTTMVKLSAKLTNVFYGEQLHGVMVKTGNDATKFSVSSLIHMYSKCGKFKEVCNVFN 184
Query: 83 -SC-STLDPVACNIMISGYIRNDRLNDAREVFDKTP-IKCCVSYTSMIMGFAQNDCWREA 139
SC +D VA N MI+ Y R ++ A +F + P + +S+ ++I G+AQN EA
Sbjct: 185 GSCVEFVDSVARNAMIAAYCREGDIDKALSIFWRNPELNDTISWNTLISGYAQNGYEEEA 244
Query: 140 LEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNM 199
L++ M G+ +E T A+V++ L + + +H ++K +S+ ++++
Sbjct: 245 LKIAVSMEESGLKWDEHTFAAVLNVLSSLKSLKIGKEVHARLLKNGSYSNKFVSSGIVDV 304
Query: 200 YCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMI 259
YC C ++ A S N+ S + M+ G++ G + A+ LF+ + K++V W M
Sbjct: 305 YCKCGNMKYAESAHLLYGFGNLYSTSSMIVGYSSQGKMGEAKRLFDSLSEKNLVVWTAMF 364
Query: 260 DGYLQVERLSEALTMYRAMLCDGI-APNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGF 318
GYL + + L + R + + P+ +++V ++ AC G +IH ++ G
Sbjct: 365 LGYLNLRQPDSVLELARDFIANETNVPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGI 424
Query: 319 DCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNN 378
+ + Y+ CG + A F++ + +N +IAG+ +G
Sbjct: 425 LMDKKLVTAFVDMYSKCGNVEYAERIFDISFERDTVMYNTMIAGYAHHG----------- 473
Query: 379 MQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG 438
+ +LF M + G KP+EIT +++ A G + G
Sbjct: 474 --------------------HEAKSFQLFEDMTEGGFKPDEITFMALLSACRHRGLVLAG 513
Query: 439 -RWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEV 476
++ + +I+ +ID+Y K ++ A E+
Sbjct: 514 EKYFKSMIEAYNISPEAGHYTCMIDLYGKANRLDKAIEL 552
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 123/281 (43%), Gaps = 47/281 (16%)
Query: 305 EGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFI 364
+G H +K G +++ Y+ G + AR F+ + ++ SWNA+IA ++
Sbjct: 6 DGFLHHIRSIKTGSTLTTISSNQLVNLYSKNGLLREARNVFDEMPERNVYSWNAVIAAYV 65
Query: 365 RNGMIEDARQLFNNMQ-KRDVYSWSAMISGYAQNEQ-PNMALELF--------------- 407
+ +++AR+LF +RD+ +++ ++SG+A+ + + A+++F
Sbjct: 66 KFNNVKEARELFKRDNCERDLITYNTLLSGFAKTDGCESEAIKMFGEMHRKEKDEIWIDD 125
Query: 408 ----------------------HG-MVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEY 444
HG MV G + ++ S+ + G KE
Sbjct: 126 FSVTTMVKLSAKLTNVFYGEQLHGVMVKTGNDATKFSVSSLIHMYSKCGKFKEVC----N 181
Query: 445 VLNNS-ITLNDNLSA-AIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGD 502
V N S + D+++ A+I Y + G I+ A +F+ + ++S WN +I G A +G
Sbjct: 182 VFNGSCVEFVDSVARNAMIAAYCREGDIDKALSIFWRNPELNDTIS-WNTLISGYAQNGY 240
Query: 503 ANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGER 543
LKI +E+ +K + TF VL+ + +G+
Sbjct: 241 EEEALKIAVSMEESGLKWDEHTFAAVLNVLSSLKSLKIGKE 281
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 103/240 (42%), Gaps = 42/240 (17%)
Query: 15 ANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLI 74
AN N L +VS L CS + G++IH ++G+ + + + +++Y+KCG +
Sbjct: 385 ANETNVPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNV 444
Query: 75 SQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQND 134
A+ +FD D V N MI+GY A +
Sbjct: 445 EYAERIFDISFERDTVMYNTMIAGY-------------------------------AHHG 473
Query: 135 CWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIIS- 193
++ ++F DM G P+E+T +++S+ H G + + K MI+ + I
Sbjct: 474 HEAKSFQLFEDMTEGGFKPDEITFMALLSACRHRGLV----LAGEKYFKSMIEAYNISPE 529
Query: 194 ----TNLLNMYCVCSSLVEARSLFD--EMKERNIVSWNVMLNGFAKAGLVELARELFERI 247
T ++++Y + L +A L + + E++ V LN + EL +E+ E++
Sbjct: 530 AGHYTCMIDLYGKANRLDKAIELMEGIDQVEKDAVILGAFLNACSWNKNTELVKEVEEKL 589
>gi|356545004|ref|XP_003540936.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Glycine max]
Length = 629
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 149/438 (34%), Positives = 256/438 (58%), Gaps = 2/438 (0%)
Query: 227 MLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPN 286
+L + K ++ A +LF + +V + ++IDG++ ++A+ ++ M+ + +
Sbjct: 65 LLRVYCKVNYIDHAIKLFRCTQNPNVYLYTSLIDGFVSFGSYTDAINLFCQMVRKHVLAD 124
Query: 287 DVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFE 346
+ + ++ AC A G G ++H +++K+G I ++ Y CG + AR F+
Sbjct: 125 NYAVTAMLKACVLQRALGSGKEVHGLVLKSGLGLDRSIALKLVELYGKCGVLEDARKMFD 184
Query: 347 LGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALEL 406
+ + + +I GM+E+A ++FN M RD W+ +I G +N + N LE+
Sbjct: 185 GMPERDVVACTVMIGSCFDCGMVEEAIEVFNEMGTRDTVCWTMVIDGLVRNGEFNRGLEV 244
Query: 407 FHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAK 466
F M GV+PNE+T V V A A G L+ GRW H Y+ + +N ++ A+I+MY++
Sbjct: 245 FREMQVKGVEPNEVTFVCVLSACAQLGALELGRWIHAYMRKCGVEVNRFVAGALINMYSR 304
Query: 467 CGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFI 526
CG I+ A +F +R VS +N++I GLA+HG + ++++S++ K ++ N ITF+
Sbjct: 305 CGDIDEAQALFDGVR--VKDVSTYNSMIGGLALHGKSIEAVELFSEMLKERVRPNGITFV 362
Query: 527 GVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPM 586
GVL+ C H GLVDLG F+SM+ ++ +EP+++HYGCMVD+LGR G+LE+A + I M +
Sbjct: 363 GVLNACSHGGLVDLGGEIFESMEMIHGIEPEVEHYGCMVDILGRVGRLEEAFDFIGRMGV 422
Query: 587 KADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSI 646
+AD + +LL+A +IH N+ +GE+ AK L+ S ++LSN YA GRW A +
Sbjct: 423 EADDKMLCSLLSACKIHKNIGMGEKVAKLLSEHYRIDSGSFIMLSNFYASLGRWSYAAEV 482
Query: 647 RKEMRDCGMKRLPGFSGV 664
R++M G+ + PG S +
Sbjct: 483 REKMEKGGIIKEPGCSSI 500
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 106/358 (29%), Positives = 173/358 (48%), Gaps = 46/358 (12%)
Query: 25 ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSC 84
A+ + L+ C A+ G+++H L+ KSGL + I L+ LY KCG++ A+ MFD
Sbjct: 127 AVTAMLKACVLQRALGSGKEVHGLVLKSGLGLDRSIALKLVELYGKCGVLEDARKMFDGM 186
Query: 85 STLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFR 144
D VAC +MI + +A EVF++ + V +T +I G +N + LEVFR
Sbjct: 187 PERDVVACTVMIGSCFDCGMVEEAIEVFNEMGTRDTVCWTMVIDGLVRNGEFNRGLEVFR 246
Query: 145 DMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCS 204
+M++ GV PNEVT V+S+ LG + R +H + K ++ ++ L+NMY C
Sbjct: 247 EMQVKGVEPNEVTFVCVLSACAQLGALELGRWIHAYMRKCGVEVNRFVAGALINMYSRCG 306
Query: 205 SLVEARSLFDEMKERNIVSWNVMLNGFA-------------------------------- 232
+ EA++LFD ++ +++ ++N M+ G A
Sbjct: 307 DIDEAQALFDGVRVKDVSTYNSMIGGLALHGKSIEAVELFSEMLKERVRPNGITFVGVLN 366
Query: 233 ---KAGLVELARELFERIP-----SKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIA 284
GLV+L E+FE + +V +G M+D +V RL EA M G+
Sbjct: 367 ACSHGGLVDLGGEIFESMEMIHGIEPEVEHYGCMVDILGRVGRLEEAFDFIGRM---GVE 423
Query: 285 PNDVMIVDLISACGRAMAFGEGLQIHSIIVKA-GFDCYDFIQATIIHFYAACGRINLA 341
+D M+ L+SAC G G ++ ++ + D FI + +FYA+ GR + A
Sbjct: 424 ADDKMLCSLLSACKIHKNIGMGEKVAKLLSEHYRIDSGSFIMLS--NFYASLGRWSYA 479
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 101/393 (25%), Positives = 187/393 (47%), Gaps = 34/393 (8%)
Query: 85 STLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFR 144
++ DP ++ Y + + ++ A ++F T YTS+I GF + +A+ +F
Sbjct: 55 TSQDPFVAFELLRVYCKVNYIDHAIKLFRCTQNPNVYLYTSLIDGFVSFGSYTDAINLFC 114
Query: 145 DMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCS 204
M V+ + + +++ + V + + +HGLV+K + I+ L+ +Y C
Sbjct: 115 QMVRKHVLADNYAVTAMLKACVLQRALGSGKEVHGLVLKSGLGLDRSIALKLVELYGKCG 174
Query: 205 SLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQ 264
L +AR +FD M ER++V+ VM+ G+VE A E+F + ++D V W +IDG ++
Sbjct: 175 VLEDARKMFDGMPERDVVACTVMIGSCFDCGMVEEAIEVFNEMGTRDTVCWTMVIDGLVR 234
Query: 265 VERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFI 324
+ L ++R M G+ PN+V V ++SAC + A G IH+ + K G + F+
Sbjct: 235 NGEFNRGLEVFREMQVKGVEPNEVTFVCVLSACAQLGALELGRWIHAYMRKCGVEVNRFV 294
Query: 325 QATIIHFYAACGRINLARLQFE-LGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRD 383
+I+ Y+ CG I+ A+ F+ + +KD ++++N++I G +G +A +LF+ M K
Sbjct: 295 AGALINMYSRCGDIDEAQALFDGVRVKD-VSTYNSMIGGLALHGKSIEAVELFSEMLKER 353
Query: 384 VYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHE 443
V+PN IT V V A + G + G E
Sbjct: 354 -------------------------------VRPNGITFVGVLNACSHGGLVDLGGEIFE 382
Query: 444 YV-LNNSITLNDNLSAAIIDMYAKCGSINTAFE 475
+ + + I ++D+ + G + AF+
Sbjct: 383 SMEMIHGIEPEVEHYGCMVDILGRVGRLEEAFD 415
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 79/165 (47%), Gaps = 38/165 (23%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E+ V L C+ A+ G+ IH+ + K G+E N F+ +LIN+Y++CG I +A+++FD
Sbjct: 257 EVTFVCVLSACAQLGALELGRWIHAYMRKCGVEVNRFVAGALINMYSRCGDIDEAQALFD 316
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
R+ D +Y SMI G A + EA+E+
Sbjct: 317 GV-------------------RVKDVS------------TYNSMIGGLALHGKSIEAVEL 345
Query: 143 FRDMRILGVIPNEVTLASVISSSVH-----LGG-IWEC-RMLHGL 180
F +M V PN +T V+++ H LGG I+E M+HG+
Sbjct: 346 FSEMLKERVRPNGITFVGVLNACSHGGLVDLGGEIFESMEMIHGI 390
>gi|297741429|emb|CBI32560.3| unnamed protein product [Vitis vinifera]
Length = 553
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 174/550 (31%), Positives = 295/550 (53%), Gaps = 13/550 (2%)
Query: 38 AVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMIS 97
++ G + H+ K+G+ S F N LI+LY+K G +++A +FD + N +I
Sbjct: 3 SIKDGFRFHAHAIKNGITSTVFTSNQLIHLYSKHGFLAEAHKLFDEMPERNVFTWNAIIW 62
Query: 98 GYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWR-EALEVFRDMRILG--VIPN 154
YI+ L ARE+FD P K V+Y SM+ G+ D + AL++F +M+ L +
Sbjct: 63 AYIKTQNLKQARELFDSAPSKDLVTYNSMLSGYINTDGYETNALKLFIEMQSLNDETRID 122
Query: 155 EVTLASVISSSVHLGGIWECRMLHGLVIKLM--IDGFVIISTNLLNMYCVCSSLVEARSL 212
E +L +++ S L + LH ++K I GF + ++L++MY C E +
Sbjct: 123 EFSLTRMLNLSAKLSMESYGKQLHSYMVKTANNISGFAV--SSLIDMYSKCGCFREVCQV 180
Query: 213 FDEMKE-RNIVSWNVMLNGFAKAGLVELARELFER-IPSKDVVSWGTMIDGYLQVERLSE 270
FD ++VS N M+ + G +E+ LF R + DVVSW T+I GY+Q +
Sbjct: 181 FDGCAGVLDLVSKNAMVAACCREGELEMGVNLFWRDLELNDVVSWNTLISGYVQNGCEED 240
Query: 271 ALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIH 330
AL ++ M + + N+ I L+SAC + G ++H ++K FI + ++
Sbjct: 241 ALKLFVHMEENEVRWNEHTIAGLLSACAGLRSLKLGKEVHGWVLKYELGFNPFISSGLVD 300
Query: 331 FYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAM 390
Y CG + A L + + S ++I G G + +AR+LF+++ ++ W+A+
Sbjct: 301 VYCKCGNMKYAELVYATIGTGNAFSITSMIVGHSSQGNMGEARRLFDSLTEKSSIIWTAL 360
Query: 391 ISGYAQNEQPNMALELFHGM-VDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNS 449
+GY +++Q EL V + P+ + ++SV A A L G+ H YVL
Sbjct: 361 FTGYVKSQQCEAVFELLSEFRVKEAMVPDALILISVLGACAIQAALNPGKQIHAYVLRIG 420
Query: 450 ITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKI 509
I L++ L +A++DMY+K G+I A ++F + +R + +N + G A HG N ++
Sbjct: 421 IELDEKLVSAMVDMYSKSGNIKYAEKIFQRVTNRDAVI--YNIMTAGYAHHGHENQAIQQ 478
Query: 510 YSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLG 569
+ ++ +R ++ +++TF+ +LS C H GLV+LGE+YF SM YN+ P++ HY CM+DL G
Sbjct: 479 FEEMLERGVRPDAVTFVALLSACRHCGLVELGEKYFASMTD-YNILPEIDHYACMIDLYG 537
Query: 570 RAGQLEDAEE 579
RA QLE A+E
Sbjct: 538 RANQLEKAQE 547
Score = 165 bits (418), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 114/458 (24%), Positives = 219/458 (47%), Gaps = 38/458 (8%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E +L L + S G+Q+HS + K+ + F +SLI++Y+KCG + +FD
Sbjct: 123 EFSLTRMLNLSAKLSMESYGKQLHSYMVKTANNISGFAVSSLIDMYSKCGCFREVCQVFD 182
Query: 83 SCS-TLDPVACNIMISGYIRNDRLNDAREVFDKT-PIKCCVSYTSMIMGFAQNDCWREAL 140
C+ LD V+ N M++ R L +F + + VS+ ++I G+ QN C +AL
Sbjct: 183 GCAGVLDLVSKNAMVAACCREGELEMGVNLFWRDLELNDVVSWNTLISGYVQNGCEEDAL 242
Query: 141 EVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMY 200
++F M V NE T+A ++S+ L + + +HG V+K + IS+ L+++Y
Sbjct: 243 KLFVHMEENEVRWNEHTIAGLLSACAGLRSLKLGKEVHGWVLKYELGFNPFISSGLVDVY 302
Query: 201 CVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMID 260
C C ++ A ++ + N S M+ G + G + AR LF+ + K + W +
Sbjct: 303 CKCGNMKYAELVYATIGTGNAFSITSMIVGHSSQGNMGEARRLFDSLTEKSSIIWTALFT 362
Query: 261 GYL---QVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAG 317
GY+ Q E + E L+ +R + + P+ ++++ ++ AC A G QIH+ +++ G
Sbjct: 363 GYVKSQQCEAVFELLSEFRVK--EAMVPDALILISVLGACAIQAALNPGKQIHAYVLRIG 420
Query: 318 FDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFN 377
+ + + + ++ Y+ ++G I+ A ++F
Sbjct: 421 IELDEKLVSAMVDMYS-------------------------------KSGNIKYAEKIFQ 449
Query: 378 NMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKE 437
+ RD ++ M +GYA + N A++ F M++ GV+P+ +T V++ A G ++
Sbjct: 450 RVTNRDAVIYNIMTAGYAHHGHENQAIQQFEEMLERGVRPDAVTFVALLSACRHCGLVEL 509
Query: 438 GRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFE 475
G + + +I + A +ID+Y + + A E
Sbjct: 510 GEKYFASMTDYNILPEIDHYACMIDLYGRANQLEKAQE 547
>gi|15128441|dbj|BAB62625.1| P0402A09.8 [Oryza sativa Japonica Group]
gi|20804430|dbj|BAB92127.1| P0455C04.2 [Oryza sativa Japonica Group]
Length = 1122
Score = 293 bits (749), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 185/624 (29%), Positives = 307/624 (49%), Gaps = 103/624 (16%)
Query: 45 IHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDR 104
+H K GL+++ F+ N+L++ Y K GL++ A+ +F
Sbjct: 157 LHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVF----------------------- 193
Query: 105 LNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISS 164
E+ DK V+Y +M+MG ++ +AL++F MR G+ T +S+++
Sbjct: 194 ----LEMHDKD----AVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTV 245
Query: 165 SVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSW 224
+ + + +H LV++ V ++ +LL+ Y C L + R LFDEM ER+ VS+
Sbjct: 246 AAGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSY 305
Query: 225 NVMLNGFA----KAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLC 280
NV++ +A A ++ L RE+ + + V+ + TM+
Sbjct: 306 NVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLS-------------------V 346
Query: 281 DGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINL 340
G P DV I G QIH+ +V G D + +I Y+ CG ++
Sbjct: 347 AGSLP-DVHI---------------GKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDA 390
Query: 341 ARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQP 400
A+ F + SW ALI G+++NG E+A QLF++M++
Sbjct: 391 AKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRR------------------- 431
Query: 401 NMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAI 460
AG++P+ T S+ A +S + GR H Y++ + + + +
Sbjct: 432 ------------AGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVL 479
Query: 461 IDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKL 520
+DMYAKCG ++ A F + +R S+S WNA+I A +G+A +K++ +
Sbjct: 480 VDMYAKCGCLDEALRTFDEMPER-NSIS-WNAVISAYAHYGEAKNAIKMFEGMLHCGFNP 537
Query: 521 NSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEV 580
+S+TF+ VL+ C H GL D +YF MK Y++ P +HY C++D LGR G +++
Sbjct: 538 DSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKM 597
Query: 581 IRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRW 640
+ MP KAD +IW ++L + RIHGN E+ AA L G++P+ V+LSNIYA AG+W
Sbjct: 598 LVEMPFKADPIIWTSILHSCRIHGNQELARVAADKLFGMEPTDATPYVILSNIYARAGQW 657
Query: 641 EDAFSIRKEMRDCGMKRLPGFSGV 664
EDA ++K MRD G+++ G+S V
Sbjct: 658 EDAACVKKIMRDRGVRKESGYSWV 681
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 117/545 (21%), Positives = 209/545 (38%), Gaps = 134/545 (24%)
Query: 42 GQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIR 101
G Q+H+L+ +S N F+ NSL++ Y+KC + + +FD D V+ N++I+ Y
Sbjct: 255 GHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAY-- 312
Query: 102 NDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASV 161
A N C L +FR+M+ LG + A++
Sbjct: 313 -----------------------------AWNQCAATVLRLFREMQKLGFDRQVLPYATM 343
Query: 162 ISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNI 221
+S + L + + +H ++ L + ++ L++MY C L A+S F E++
Sbjct: 344 LSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSA 403
Query: 222 VSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCD 281
+SW ++ G+ + G E EAL ++ M
Sbjct: 404 ISWTALITGYVQNGQHE-------------------------------EALQLFSDMRRA 432
Query: 282 GIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLA 341
G+ P+ +I A G G Q+HS ++++G+ F + ++ YA CG ++ A
Sbjct: 433 GLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEA 492
Query: 342 RLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPN 401
F+ + + SWNA+I S YA +
Sbjct: 493 LRTFDEMPERNSISWNAVI-------------------------------SAYAHYGEAK 521
Query: 402 MALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAII 461
A+++F GM+ G P+ +T +SV A + +G E
Sbjct: 522 NAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADE------------------------ 557
Query: 462 DMYAKCGSINTAFEVFYHIRDRTTSVSPWNA-IICGLAMHGDANLTLKIYSDLEKRNIKL 520
C ++H+ S+SPW C + G ++ L + K
Sbjct: 558 -----CMK-------YFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKA 605
Query: 521 NSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEP-DLKHYGCMVDLLGRAGQLEDAEE 579
+ I + +L +C G +L + ++ +EP D Y + ++ RAGQ EDA
Sbjct: 606 DPIIWTSILHSCRIHGNQELAR---VAADKLFGMEPTDATPYVILSNIYARAGQWEDAAC 662
Query: 580 VIRSM 584
V + M
Sbjct: 663 VKKIM 667
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 130/296 (43%), Gaps = 27/296 (9%)
Query: 313 IVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDA 372
+VK GFD + + + G ++ AR F+ +I S N +++ + +G + A
Sbjct: 34 MVKTGFDVLTYRLNLGLRSLLSSGHLHRARAMFDQMPHKNIFSLNLILSAYSSSGDLPAA 93
Query: 373 RQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVF----CA 428
+ LF + R+ +W+ M+ +A + + AL LF M+ GV P+ +T+ +V C
Sbjct: 94 QHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPGCT 153
Query: 429 IAS--SGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTS 486
+ S +K G H +V N ++D Y K G + A VF + D+
Sbjct: 154 VPSLHPFAIKFGLDTHVFVCNT-----------LLDAYCKHGLLAAARRVFLEMHDKDAV 202
Query: 487 VSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFK 546
+NA++ G + G L++++ + + I TF +L+ + LG +
Sbjct: 203 T--YNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHA 260
Query: 547 SM---KSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAA 599
+ SV NV + ++D + L+D + MP + D V + ++AA
Sbjct: 261 LVLRSTSVLNVFVN----NSLLDFYSKCDCLDDMRRLFDEMPER-DNVSYNVIIAA 311
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 108/222 (48%), Gaps = 13/222 (5%)
Query: 28 SALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTL 87
S ++ S+ + G+Q+HS + +SG +S+ F + L+++YAKCG + +A FD
Sbjct: 443 SIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPER 502
Query: 88 DPVACNIMISGYIRNDRLNDAREVFDKTPIKC-----CVSYTSMIMGFAQNDCWREALEV 142
+ ++ N +IS Y +A ++F+ + C V++ S++ + N E ++
Sbjct: 503 NSISWNAVISAYAHYGEAKNAIKMFEGM-LHCGFNPDSVTFLSVLAACSHNGLADECMKY 561
Query: 143 FRDMR-ILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYC 201
F M+ + P + A VI + LG + + +++++ II T++L+
Sbjct: 562 FHLMKHQYSISPWKEHYACVIDT---LGRVGCFSQVQKMLVEMPFKADPIIWTSILHSCR 618
Query: 202 VCSSLVEARSLFDE---MKERNIVSWNVMLNGFAKAGLVELA 240
+ + AR D+ M+ + + ++ N +A+AG E A
Sbjct: 619 IHGNQELARVAADKLFGMEPTDATPYVILSNIYARAGQWEDA 660
>gi|242048970|ref|XP_002462229.1| hypothetical protein SORBIDRAFT_02g022150 [Sorghum bicolor]
gi|241925606|gb|EER98750.1| hypothetical protein SORBIDRAFT_02g022150 [Sorghum bicolor]
Length = 686
Score = 293 bits (749), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 181/610 (29%), Positives = 297/610 (48%), Gaps = 78/610 (12%)
Query: 61 QNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCC 120
+N I + + G + A+ +F + S N M+ GY N RL A F P
Sbjct: 38 RNKAITAHMRAGRVPDAERLFAAMSRRSTSTYNAMLGGYAANGRLTLALSFFRSIPRPDS 97
Query: 121 VSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGL 180
SY +++ + +A +F +M + + V+ +ISS + HGL
Sbjct: 98 FSYNTLLHALGVSSSLADARALFDEM----PVKDSVSYNVMISSHAN----------HGL 143
Query: 181 V------IKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKA 234
V L + + +L Y + EAR LFD E + +SWN ++ G+ +
Sbjct: 144 VSLARHYFDLAPEKDAVSWNGMLAAYIRNGRIQEARDLFDSRTEWDAISWNALMAGYVQC 203
Query: 235 GLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLI 294
+E A+++F R+P +DVVSW TM+ G+ + ++EA ++ +AP I D+
Sbjct: 204 SQIEEAQKMFNRMPQRDVVSWNTMVSGHARRGDMAEARRLF------DVAP----IRDV- 252
Query: 295 SACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIA 354
F ++ YA G + A+ F+ + +
Sbjct: 253 ----------------------------FTWTAVVSGYAQNGMLEEAKRVFDAMPEKNAV 284
Query: 355 SWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAG 414
SWNA++A +++ M+E+A++LF+ M R+V SW+ M++GYAQ + A +F D
Sbjct: 285 SWNAMMAAYVQRRMMEEAKELFDAMPCRNVASWNTMLTGYAQAGMLDEARAIF----DMM 340
Query: 415 VKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAF 474
+ + ++ ++ A + G +E TL MY KCG++ A
Sbjct: 341 PQKDAVSWAAMLAAYSQGGFSEE-------------TLQLFKEMGRCAMYFKCGNMEEAH 387
Query: 475 EVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCH 534
F + +R + WN +I G A HG L+++ + K + K + IT +GVL+ C H
Sbjct: 388 SAFEEMEER--DIVSWNTMIAGYARHGFGKEALEVFDTMRKTSTKPDDITLVGVLAACSH 445
Query: 535 AGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWG 594
+GLV+ G YF SM + V +HY CM+DLLGRAG+L++A +++ MP + D +WG
Sbjct: 446 SGLVEKGISYFYSMHRDFGVTAKPEHYTCMIDLLGRAGRLDEAVNLMKDMPFEPDSTMWG 505
Query: 595 TLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCG 654
LL ASRIH N E+G AA+ + L+P + VLLSNIYA +G+W D +R M + G
Sbjct: 506 ALLGASRIHRNSELGRNAAEKIFELEPENAGMYVLLSNIYASSGKWRDVDKMRLMMHERG 565
Query: 655 MKRLPGFSGV 664
+K++PGFS +
Sbjct: 566 VKKVPGFSWI 575
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 131/497 (26%), Positives = 229/497 (46%), Gaps = 47/497 (9%)
Query: 49 IFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDA 108
+F + +T N+++ YA G ++ A S F S D + N ++ + L DA
Sbjct: 57 LFAAMSRRSTSTYNAMLGGYAANGRLTLALSFFRSIPRPDSFSYNTLLHALGVSSSLADA 116
Query: 109 REVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHL 168
R +FD+ P+K VSY MI A + A F L + V+ ++++ +
Sbjct: 117 RALFDEMPVKDSVSYNVMISSHANHGLVSLARHYFD----LAPEKDAVSWNGMLAAYIRN 172
Query: 169 GGIWECRMLHGLVIKLMIDGFVIISTN-LLNMYCVCSSLVEARSLFDEMKERNIVSWNVM 227
G I E R L + + IS N L+ Y CS + EA+ +F+ M +R++VSWN M
Sbjct: 173 GRIQEARDLFDSRTE-----WDAISWNALMAGYVQCSQIEEAQKMFNRMPQRDVVSWNTM 227
Query: 228 LNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPND 287
++G A+ G + AR LF+ P +DV +W ++ GY Q L EA ++ AM N
Sbjct: 228 VSGHARRGDMAEARRLFDVAPIRDVFTWTAVVSGYAQNGMLEEAKRVFDAM----PEKNA 283
Query: 288 VMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFEL 347
V +++A + E ++ + ++ T++ YA G ++ AR F++
Sbjct: 284 VSWNAMMAAYVQRRMMEEAKELFDAMPCRNVASWN----TMLTGYAQAGMLDEARAIFDM 339
Query: 348 GIKDHIASWNALIAGFIRNGMIEDARQLFN----------------------NMQKRDVY 385
+ SW A++A + + G E+ QLF M++RD+
Sbjct: 340 MPQKDAVSWAAMLAAYSQGGFSEETLQLFKEMGRCAMYFKCGNMEEAHSAFEEMEERDIV 399
Query: 386 SWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG-RWAHEY 444
SW+ MI+GYA++ ALE+F M KP++IT+V V A + SG +++G + +
Sbjct: 400 SWNTMIAGYARHGFGKEALEVFDTMRKTSTKPDDITLVGVLAACSHSGLVEKGISYFYSM 459
Query: 445 VLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDA- 503
+ +T +ID+ + G ++ A + + S W A++ +H ++
Sbjct: 460 HRDFGVTAKPEHYTCMIDLLGRAGRLDEAVNLMKDMPFEPDSTM-WGALLGASRIHRNSE 518
Query: 504 ---NLTLKIYSDLEKRN 517
N KI+ +LE N
Sbjct: 519 LGRNAAEKIF-ELEPEN 534
>gi|224112267|ref|XP_002316137.1| predicted protein [Populus trichocarpa]
gi|222865177|gb|EEF02308.1| predicted protein [Populus trichocarpa]
Length = 601
Score = 293 bits (749), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 152/428 (35%), Positives = 242/428 (56%), Gaps = 33/428 (7%)
Query: 237 VELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISA 296
++ A +LFE IP D+V + +M GY + +A++++ L + P+D L+ A
Sbjct: 77 MDYAHQLFEAIPQPDIVLFNSMFRGYSRSNAPLKAISLFIKALNYNLLPDDYTFPSLLKA 136
Query: 297 CGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASW 356
C A AF +G Q+H + +K G + ++ T+I+ YA C +
Sbjct: 137 CVVAKAFQQGKQLHCLAIKLGLNENPYVCPTLINMYAGCNDV------------------ 178
Query: 357 NALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVK 416
+ A+++F+ + + V S++A+I+GYA++ +PN AL LF + +K
Sbjct: 179 -------------DGAQRVFDEILEPCVVSYNAIITGYARSSRPNEALSLFRQLQARKLK 225
Query: 417 PNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEV 476
PN++T++SV + A G L G+W HEYV N + ++ A+IDMYAKCGS++ A V
Sbjct: 226 PNDVTVLSVLSSCALLGALDLGKWIHEYVKKNGLDKYVKVNTALIDMYAKCGSLDGAISV 285
Query: 477 FYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAG 536
F + R T W+A+I AMHG + ++ ++ + ++ + ITF+G+L C H G
Sbjct: 286 FESMSVRDTQA--WSAMIVAYAMHGQGQDVMSMFEEMARAKVQPDEITFLGLLYACSHTG 343
Query: 537 LVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTL 596
LVD G RYF SM VY + P +KHYGCMVDLLGRAG L +A + I +P+K ++W TL
Sbjct: 344 LVDEGFRYFYSMSEVYGIIPGIKHYGCMVDLLGRAGLLHEAYKFIDELPIKPTPILWRTL 403
Query: 597 LAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMK 656
L++ HGN+E+ ++ + L SHG V+LSN+ A AG+WED ++RK M G
Sbjct: 404 LSSCSSHGNLELAKQVMNQILELDDSHGGDYVILSNLCARAGKWEDVDTLRKLMIHKGAV 463
Query: 657 RLPGFSGV 664
++PG S +
Sbjct: 464 KIPGCSSI 471
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 130/587 (22%), Positives = 244/587 (41%), Gaps = 138/587 (23%)
Query: 12 SQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKC 71
SQ ++ N+ Y +L+S L C++ + + +QI + K+ L+++ I LIN
Sbjct: 15 SQHSSYYNTTYPSSLLSCLPKCTS---LKELKQIQAFSIKTHLQNDLQILTKLIN----- 66
Query: 72 GLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFA 131
SC T +P + ++ A ++F+ P V + SM G++
Sbjct: 67 -----------SC-TQNPTTAS-----------MDYAHQLFEAIPQPDIVLFNSMFRGYS 103
Query: 132 QNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVI 191
+++ +A+ +F ++P++ T S++ + V + + LH L IKL ++
Sbjct: 104 RSNAPLKAISLFIKALNYNLLPDDYTFPSLLKACVVAKAFQQGKQLHCLAIKLGLNENPY 163
Query: 192 ISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKD 251
+ L+NMY C+ + A+ +FDE+ E +VS+N ++ G+A++
Sbjct: 164 VCPTLINMYAGCNDVDGAQRVFDEILEPCVVSYNAIITGYARSS---------------- 207
Query: 252 VVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHS 311
R +EAL+++R + + PNDV ++ ++S+C A G IH
Sbjct: 208 ---------------RPNEALSLFRQLQARKLKPNDVTVLSVLSSCALLGALDLGKWIHE 252
Query: 312 IIVKAGFDCYDFIQATIIHFYAACGRINLARLQFE-LGIKDHIASWNALIAGFIRNGMIE 370
+ K G D Y + +I YA CG ++ A FE + ++D +W+A+I + +G +
Sbjct: 253 YVKKNGLDKYVKVNTALIDMYAKCGSLDGAISVFESMSVRD-TQAWSAMIVAYAMHGQGQ 311
Query: 371 DARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIA 430
D +F M + A V+P+EIT + + A +
Sbjct: 312 DVMSMFEEMAR-------------------------------AKVQPDEITFLGLLYACS 340
Query: 431 SSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPW 490
+G + EG F FY + + +
Sbjct: 341 HTGLVDEG-----------------------------------FRYFYSMSEVYGIIPGI 365
Query: 491 NAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKS 550
C + + G A L + Y +++ IK I + +LS+C G ++L ++ +
Sbjct: 366 KHYGCMVDLLGRAGLLHEAYKFIDELPIKPTPILWRTLLSSCSSHGNLELAKQVMNQI-- 423
Query: 551 VYNVEPDLKH---YGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWG 594
+E D H Y + +L RAG+ ED + + + M K V I G
Sbjct: 424 ---LELDDSHGGDYVILSNLCARAGKWEDVDTLRKLMIHKGAVKIPG 467
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 103/390 (26%), Positives = 168/390 (43%), Gaps = 78/390 (20%)
Query: 2 PLDHFHSVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQ 61
PL + NL DY S L+ C A QG+Q+H L K GL N ++
Sbjct: 108 PLKAISLFIKALNYNLLPDDYTFP--SLLKACVVAKAFQQGKQLHCLAIKLGLNENPYVC 165
Query: 62 NSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCV 121
+LIN+YA C ND ++ A+ VFD+ C V
Sbjct: 166 PTLINMYAGC------------------------------ND-VDGAQRVFDEILEPCVV 194
Query: 122 SYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLV 181
SY ++I G+A++ EAL +FR ++ + PN+VT+ SV+SS LG + + +H V
Sbjct: 195 SYNAIITGYARSSRPNEALSLFRQLQARKLKPNDVTVLSVLSSCALLGALDLGKWIHEYV 254
Query: 182 IKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELAR 241
K +D +V ++T L++MY C SL A S+F+ M R+ +W+ M+ +A G
Sbjct: 255 KKNGLDKYVKVNTALIDMYAKCGSLDGAISVFESMSVRDTQAWSAMIVAYAMHG------ 308
Query: 242 ELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAM 301
+DV+S M+ M + P+++ + L+ AC
Sbjct: 309 ------QGQDVMS-------------------MFEEMARAKVQPDEITFLGLLYACSHTG 343
Query: 302 AFGEGL-------QIHSIIVKAGFDCYDFIQATIIHFYAACGRINLA-RLQFELGIKDHI 353
EG +++ II G Y ++ G ++ A + EL IK
Sbjct: 344 LVDEGFRYFYSMSEVYGII--PGIKHY----GCMVDLLGRAGLLHEAYKFIDELPIKPTP 397
Query: 354 ASWNALIAGFIRNGMIEDARQLFNNMQKRD 383
W L++ +G +E A+Q+ N + + D
Sbjct: 398 ILWRTLLSSCSSHGNLELAKQVMNQILELD 427
>gi|52076596|dbj|BAD45498.1| hypothetical protein [Oryza sativa Japonica Group]
gi|218187337|gb|EEC69764.1| hypothetical protein OsI_00012 [Oryza sativa Indica Group]
Length = 810
Score = 293 bits (749), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 185/624 (29%), Positives = 307/624 (49%), Gaps = 103/624 (16%)
Query: 45 IHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDR 104
+H K GL+++ F+ N+L++ Y K GL++ A+ +F
Sbjct: 157 LHPFAIKFGLDTHVFVCNTLLDAYCKHGLLAAARRVF----------------------- 193
Query: 105 LNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISS 164
E+ DK V+Y +M+MG ++ +AL++F MR G+ T +S+++
Sbjct: 194 ----LEMHDKD----AVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTV 245
Query: 165 SVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSW 224
+ + + +H LV++ V ++ +LL+ Y C L + R LFDEM ER+ VS+
Sbjct: 246 AAGMAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSY 305
Query: 225 NVMLNGFA----KAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLC 280
NV++ +A A ++ L RE+ + + V+ + TM+
Sbjct: 306 NVIIAAYAWNQCAATVLRLFREMQKLGFDRQVLPYATMLS-------------------V 346
Query: 281 DGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINL 340
G P DV I G QIH+ +V G D + +I Y+ CG ++
Sbjct: 347 AGSLP-DVHI---------------GKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDA 390
Query: 341 ARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQP 400
A+ F + SW ALI G+++NG E+A QLF++M++
Sbjct: 391 AKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRR------------------- 431
Query: 401 NMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAI 460
AG++P+ T S+ A +S + GR H Y++ + + + +
Sbjct: 432 ------------AGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVL 479
Query: 461 IDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKL 520
+DMYAKCG ++ A F + +R S+S WNA+I A +G+A +K++ +
Sbjct: 480 VDMYAKCGCLDEALRTFDEMPER-NSIS-WNAVISAYAHYGEAKNAIKMFEGMLHCGFNP 537
Query: 521 NSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEV 580
+S+TF+ VL+ C H GL D +YF MK Y++ P +HY C++D LGR G +++
Sbjct: 538 DSVTFLSVLAACSHNGLADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKM 597
Query: 581 IRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRW 640
+ MP KAD +IW ++L + RIHGN E+ AA L G++P+ V+LSNIYA AG+W
Sbjct: 598 LVEMPFKADPIIWTSILHSCRIHGNQELARVAADKLFGMEPTDATPYVILSNIYARAGQW 657
Query: 641 EDAFSIRKEMRDCGMKRLPGFSGV 664
EDA ++K MRD G+++ G+S V
Sbjct: 658 EDAACVKKIMRDRGVRKESGYSWV 681
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 119/545 (21%), Positives = 210/545 (38%), Gaps = 134/545 (24%)
Query: 42 GQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIR 101
G Q+H+L+ +S N F+ NSL++ Y+KC + + +FD D V+ N++I+ Y
Sbjct: 255 GHQVHALVLRSTSVLNVFVNNSLLDFYSKCDCLDDMRRLFDEMPERDNVSYNVIIAAY-- 312
Query: 102 NDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASV 161
A N C L +FR+M+ LG + A++
Sbjct: 313 -----------------------------AWNQCAATVLRLFREMQKLGFDRQVLPYATM 343
Query: 162 ISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNI 221
+S + L + + +H ++ L + ++ L++MY C L A+S F E++
Sbjct: 344 LSVAGSLPDVHIGKQIHAQLVLLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSA 403
Query: 222 VSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCD 281
+SW ++ G+ + G E A +LF M RA
Sbjct: 404 ISWTALITGYVQNGQHEEALQLFS---------------------------DMRRA---- 432
Query: 282 GIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLA 341
G+ P+ +I A G G Q+HS ++++G+ F + ++ YA CG ++ A
Sbjct: 433 GLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEA 492
Query: 342 RLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPN 401
F+ + + SWNA+I S YA +
Sbjct: 493 LRTFDEMPERNSISWNAVI-------------------------------SAYAHYGEAK 521
Query: 402 MALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAII 461
A+++F GM+ G P+ +T +SV A + +G E
Sbjct: 522 NAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLADE------------------------ 557
Query: 462 DMYAKCGSINTAFEVFYHIRDRTTSVSPWNA-IICGLAMHGDANLTLKIYSDLEKRNIKL 520
C ++H+ S+SPW C + G ++ L + K
Sbjct: 558 -----CMK-------YFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKA 605
Query: 521 NSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEP-DLKHYGCMVDLLGRAGQLEDAEE 579
+ I + +L +C G +L + ++ +EP D Y + ++ RAGQ EDA
Sbjct: 606 DPIIWTSILHSCRIHGNQELAR---VAADKLFGMEPTDATPYVILSNIYARAGQWEDAAC 662
Query: 580 VIRSM 584
V + M
Sbjct: 663 VKKIM 667
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 130/296 (43%), Gaps = 27/296 (9%)
Query: 313 IVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDA 372
+VK GFD + + + G ++ AR F+ +I S N +++ + +G + A
Sbjct: 34 MVKTGFDVLTYRLNLGLRSLLSSGHLHRARAMFDQMPHKNIFSLNLILSAYSSSGDLPAA 93
Query: 373 RQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVF----CA 428
+ LF + R+ +W+ M+ +A + + AL LF M+ GV P+ +T+ +V C
Sbjct: 94 QHLFLSSPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTVLNLPGCT 153
Query: 429 IAS--SGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTS 486
+ S +K G H +V N ++D Y K G + A VF + D+
Sbjct: 154 VPSLHPFAIKFGLDTHVFVCNT-----------LLDAYCKHGLLAAARRVFLEMHDKDAV 202
Query: 487 VSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFK 546
+NA++ G + G L++++ + + I TF +L+ + LG +
Sbjct: 203 T--YNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAAGMAHLLLGHQVHA 260
Query: 547 SM---KSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAA 599
+ SV NV + ++D + L+D + MP + D V + ++AA
Sbjct: 261 LVLRSTSVLNVFVN----NSLLDFYSKCDCLDDMRRLFDEMPER-DNVSYNVIIAA 311
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 108/222 (48%), Gaps = 13/222 (5%)
Query: 28 SALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTL 87
S ++ S+ + G+Q+HS + +SG +S+ F + L+++YAKCG + +A FD
Sbjct: 443 SIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRTFDEMPER 502
Query: 88 DPVACNIMISGYIRNDRLNDAREVFDKTPIKC-----CVSYTSMIMGFAQNDCWREALEV 142
+ ++ N +IS Y +A ++F+ + C V++ S++ + N E ++
Sbjct: 503 NSISWNAVISAYAHYGEAKNAIKMFEGM-LHCGFNPDSVTFLSVLAACSHNGLADECMKY 561
Query: 143 FRDMR-ILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYC 201
F M+ + P + A VI + LG + + +++++ II T++L+
Sbjct: 562 FHLMKHQYSISPWKEHYACVIDT---LGRVGCFSQVQKMLVEMPFKADPIIWTSILHSCR 618
Query: 202 VCSSLVEARSLFDE---MKERNIVSWNVMLNGFAKAGLVELA 240
+ + AR D+ M+ + + ++ N +A+AG E A
Sbjct: 619 IHGNQELARVAADKLFGMEPTDATPYVILSNIYARAGQWEDA 660
>gi|224106429|ref|XP_002314162.1| predicted protein [Populus trichocarpa]
gi|222850570|gb|EEE88117.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 293 bits (749), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 181/634 (28%), Positives = 311/634 (49%), Gaps = 95/634 (14%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
+ +C+ + G Q HS I K G SN +I ++++++YAKCG IS A
Sbjct: 76 VSFCAKSGSFHLGIQAHSTILKLGFISNVYICSAVVDMYAKCGEISSA------------ 123
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
R +FD+ P + V++ S+I G+ +C + A+E+F M
Sbjct: 124 -------------------RVLFDQMPQRTVVTWNSLIYGYLAVNCPKIAIELFIKMLKA 164
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
+ + +++S ++ L +HGL++K + V++ T+L++MY
Sbjct: 165 AINVSAFSVSSCLAGCSQLEAREVGTQVHGLILKTGLGYNVVVGTSLVDMY--------- 215
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLS 269
+K G V+ +R +F+ + +++V++W +M+ GY Q+E+
Sbjct: 216 ----------------------SKCGDVDDSRLVFDHMVNRNVITWTSMVTGYSQIEKPD 253
Query: 270 EALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATII 329
EA+ + + M+ + PN V L+S+ LQ+H I++ G + +I AT++
Sbjct: 254 EAMALVKEMVLQDLRPNCVTYNSLLSSFSGPDCLSYCLQVHCCIIQLGLESNVYIAATLV 313
Query: 330 HFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSA 389
Y+ C + +ED +++ + + D +W+A
Sbjct: 314 TVYSKC------------------------------SSSLEDFKKVCSVVMTCDNIAWNA 343
Query: 390 MISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNS 449
+I+GY++ + AL FH M AG+ + T+ SV AI +S L+EG+ H +
Sbjct: 344 VIAGYSKLGRHEEALRCFHEMKQAGIDIDSYTLTSVVGAIGNSSFLEEGKAMHALIHRTG 403
Query: 450 ITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKI 509
+ N+ ++ MYA+CG+I + VF+ + + V WNA++ A HG +++
Sbjct: 404 YISHLNVQNGLVSMYARCGAIGDSKRVFWFMEEH--DVISWNALLTAFAHHGYGREAVEL 461
Query: 510 YSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEP-DLKHYGCMVDLL 568
+ + K IK NS TF+ VL C H G VD G YF +MKS +EP ++HY +VD
Sbjct: 462 FEQMRKTEIKPNSSTFLAVLCACSHVGFVDKGIEYFDTMKSDILLEPLKVEHYASLVDTF 521
Query: 569 GRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRV 628
GRAG L +AE I SMP+ ++ LL+AS +HGN E+ R+AK L L P+ + V
Sbjct: 522 GRAGYLNEAEAFINSMPIVPAPSVYKALLSASLVHGNREIAARSAKKLLELWPNDPATYV 581
Query: 629 LLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
LLS++ G W+DA +RK M D G+++ PG+S
Sbjct: 582 LLSSVLTVDGNWDDAADLRKLMCDRGLRKKPGYS 615
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 111/488 (22%), Positives = 212/488 (43%), Gaps = 97/488 (19%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
++ S L CS A G Q+H LI K+GL N + SL+++Y+KCG + ++ +FD
Sbjct: 171 FSVSSCLAGCSQLEAREVGTQVHGLILKTGLGYNVVVGTSLVDMYSKCGDVDDSRLVFDH 230
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
M++ RN +++TSM+ G++Q + EA+ +
Sbjct: 231 -----------MVN---RN-----------------VITWTSMVTGYSQIEKPDEAMALV 259
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
++M + + PN VT S++SS + C +H +I+L ++ V I+ L+ +Y C
Sbjct: 260 KEMVLQDLRPNCVTYNSLLSSFSGPDCLSYCLQVHCCIIQLGLESNVYIAATLVTVYSKC 319
Query: 204 SSLVEA-RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
SS +E + + + + ++WN ++ G++K G
Sbjct: 320 SSSLEDFKKVCSVVMTCDNIAWNAVIAGYSKLG--------------------------- 352
Query: 263 LQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD 322
R EAL + M GI + + ++ A G + EG +H++I + G+ +
Sbjct: 353 ----RHEEALRCFHEMKQAGIDIDSYTLTSVVGAIGNSSFLEEGKAMHALIHRTGYISHL 408
Query: 323 FIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKR 382
+Q ++ YA CG I ++ F + + SWNAL+ F +G +A +LF M+K
Sbjct: 409 NVQNGLVSMYARCGAIGDSKRVFWFMEEHDVISWNALLTAFAHHGYGREAVELFEQMRKT 468
Query: 383 DVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAH 442
+ +KPN T ++V CA + G + +G
Sbjct: 469 E-------------------------------IKPNSSTFLAVLCACSHVGFVDKGIEYF 497
Query: 443 EYVLNNSI--TLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMH 500
+ + ++ + L A+++D + + G +N A E F + + S + A++ +H
Sbjct: 498 DTMKSDILLEPLKVEHYASLVDTFGRAGYLNEA-EAFINSMPIVPAPSVYKALLSASLVH 556
Query: 501 GDANLTLK 508
G+ + +
Sbjct: 557 GNREIAAR 564
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 86/186 (46%), Gaps = 12/186 (6%)
Query: 417 PNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEV 476
P + + FCA SG+ G AH +L N + +A++DMYAKCG I++A +
Sbjct: 69 PYFLNKIVSFCA--KSGSFHLGIQAHSTILKLGFISNVYICSAVVDMYAKCGEISSARVL 126
Query: 477 FYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAG 536
F + RT V WN++I G + ++++ + K I +++ + L+ C
Sbjct: 127 FDQMPQRT--VVTWNSLIYGYLAVNCPKIAIELFIKMLKAAINVSAFSVSSCLAGCSQLE 184
Query: 537 LVDLGERYFKSMKSV---YNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIW 593
++G + + YNV +VD+ + G ++D+ V M + +V+ W
Sbjct: 185 AREVGTQVHGLILKTGLGYNVVVGTS----LVDMYSKCGDVDDSRLVFDHM-VNRNVITW 239
Query: 594 GTLLAA 599
+++
Sbjct: 240 TSMVTG 245
>gi|302782465|ref|XP_002973006.1| hypothetical protein SELMODRAFT_98207 [Selaginella moellendorffii]
gi|300159607|gb|EFJ26227.1| hypothetical protein SELMODRAFT_98207 [Selaginella moellendorffii]
Length = 698
Score = 293 bits (749), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 182/570 (31%), Positives = 298/570 (52%), Gaps = 12/570 (2%)
Query: 104 RLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDM--RILGVIPNEVTLASV 161
RL DAR VFD P++ S+ +I + +EAL ++R + + + +SV
Sbjct: 7 RLEDARAVFDSMPLRNEFSWAIIISAYVGAGKEQEALCLYRTLVRSSTEIQADAFIFSSV 66
Query: 162 ISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNI 221
+++ L + + +H ++K + V + L+ MY C + A+ +FD + R++
Sbjct: 67 LAACARLKCLEQGLEIHERIVKRGVKQDVGLQNALVTMYAKCGRIDRAKQVFDRITHRDV 126
Query: 222 VSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCD 281
VSWN M++ A+AG +E+A ++++ + S DV+ W TMI EAL +YR M+
Sbjct: 127 VSWNAMVSANAEAGHLEVALKIYQEMVSADVLCWSTMISAEAMAGHDREALELYREMIL- 185
Query: 282 GIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLA 341
+ PN + +++AC R G + +++G D + T+++ YA G + A
Sbjct: 186 SVRPNASTLATVLAACTRLGDLSSGALVRDGAIQSGLDRDAVVGTTLVNLYARFGDVIAA 245
Query: 342 RLQFELGIKDH-IASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQP 400
R +KD + SWNA++ F +N +++A +LF M + V SW+AMI+G+ QN +P
Sbjct: 246 REVLFDSMKDRTVVSWNAMVTAFAQNARVDEAEKLFREMPDKSVISWNAMIAGFGQNGRP 305
Query: 401 NMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAI 460
ALELF M G++P+ +T SV A A+ GR+ + ++ ++ + +++ +I
Sbjct: 306 KQALELFRRMDLEGLQPSRMTYCSVLDACANLTASSLGRFICDG-MDEALAKDISVANSI 364
Query: 461 IDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKL 520
+MY KCG A + F + R V W AII + +G ++ L I+ + + ++
Sbjct: 365 CNMYGKCGLPELARQTFLEMTYR--DVVSWTAIIAAYSQNGYSSEALDIFRIMVQAGVEP 422
Query: 521 NSITFIGVLSTCCHAGLVDLGERYFKSMKS--VYNVEPDLKHYGCMVDLLGRAGQLEDAE 578
N IT I LS C H L D G F S+ S Y V + H+ C +DLLGRAG L+DAE
Sbjct: 423 NGITLINTLSACSHGALFDEGSDIFSSLVSGDYYGVTANESHFLCAIDLLGRAGYLKDAE 482
Query: 579 EVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPS--HGPSR-VLLSNIYA 635
+I MP KA V W +LL+A R +++ R A L L S P+ V+LSNIYA
Sbjct: 483 TLITKMPFKAGAVAWTSLLSACRTFRDLKRAGRVANHLFELDESSIKDPAPYVMLSNIYA 542
Query: 636 DAGRWEDAFSIRKEMRDCGMKRLPGFSGVV 665
AG +R ++R K+LPG S +
Sbjct: 543 SAGDRAAEMKLRDQIRIKCRKKLPGKSTIT 572
Score = 202 bits (514), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 139/472 (29%), Positives = 233/472 (49%), Gaps = 40/472 (8%)
Query: 28 SALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTL 87
S L C+ + QG +IH I K G++ + +QN+L+ +YAKCG I +AK +FD +
Sbjct: 65 SVLAACARLKCLEQGLEIHERIVKRGVKQDVGLQNALVTMYAKCGRIDRAKQVFDRITHR 124
Query: 88 DPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMR 147
D V+ N M+S L A +++ + + +++MI A REALE++R+M
Sbjct: 125 DVVSWNAMVSANAEAGHLEVALKIYQEMVSADVLCWSTMISAEAMAGHDREALELYREM- 183
Query: 148 ILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLV 207
IL V PN TLA+V+++ LG + ++ I+ +D ++ T L+N+Y ++
Sbjct: 184 ILSVRPNASTLATVLAACTRLGDLSSGALVRDGAIQSGLDRDAVVGTTLVNLYARFGDVI 243
Query: 208 EARS-LFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVE 266
AR LFD MK+R +VSWN M+ FA+ V+ A +LF +P K V+SW MI G+ Q
Sbjct: 244 AAREVLFDSMKDRTVVSWNAMVTAFAQNARVDEAEKLFREMPDKSVISWNAMIAGFGQNG 303
Query: 267 RLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQA 326
R +AL ++R M +G+ P+ + ++ AC A G I + +A +
Sbjct: 304 RPKQALELFRRMDLEGLQPSRMTYCSVLDACANLTASSLGRFICDGMDEALAKDIS-VAN 362
Query: 327 TIIHFYAACGRINLARLQF-ELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVY 385
+I + Y CG LAR F E+ +D + SW A+IA
Sbjct: 363 SICNMYGKCGLPELARQTFLEMTYRD-VVSWTAIIAA----------------------- 398
Query: 386 SWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYV 445
Y+QN + AL++F MV AGV+PN IT+++ A + EG +
Sbjct: 399 --------YSQNGYSSEALDIFRIMVQAGVEPNGITLINTLSACSHGALFDEGSDIFSSL 450
Query: 446 LNNS---ITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAII 494
++ +T N++ ID+ + G + A + + + +V+ W +++
Sbjct: 451 VSGDYYGVTANESHFLCAIDLLGRAGYLKDAETLITKMPFKAGAVA-WTSLL 501
Score = 147 bits (370), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 109/438 (24%), Positives = 186/438 (42%), Gaps = 67/438 (15%)
Query: 199 MYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTM 258
MY C L +AR++FD M RN SW ++++ + AG
Sbjct: 1 MYRDCGRLEDARAVFDSMPLRNEFSWAIIISAYVGAG----------------------- 37
Query: 259 IDGYLQVERLSEALTMYRAML--CDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKA 316
+ EAL +YR ++ I + + +++AC R +GL+IH IVK
Sbjct: 38 --------KEQEALCLYRTLVRSSTEIQADAFIFSSVLAACARLKCLEQGLEIHERIVKR 89
Query: 317 GFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLF 376
G +Q ++ YA CGRI+ A+ F+ + SWNA+++ G +E A +++
Sbjct: 90 GVKQDVGLQNALVTMYAKCGRIDRAKQVFDRITHRDVVSWNAMVSANAEAGHLEVALKIY 149
Query: 377 NNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLK 436
M DV WS MIS A ALEL+ M+ V+PN T+ +V A G L
Sbjct: 150 QEMVSADVLCWSTMISAEAMAGHDREALELYREMI-LSVRPNASTLATVLAACTRLGDLS 208
Query: 437 EGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFY-HIRDRTT---------- 485
G + + + + + + ++++YA+ G + A EV + ++DRT
Sbjct: 209 SGALVRDGAIQSGLDRDAVVGTTLVNLYARFGDVIAAREVLFDSMKDRTVVSWNAMVTAF 268
Query: 486 -------------------SVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFI 526
SV WNA+I G +G L+++ ++ ++ + +T+
Sbjct: 269 AQNARVDEAEKLFREMPDKSVISWNAMIAGFGQNGRPKQALELFRRMDLEGLQPSRMTYC 328
Query: 527 GVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPM 586
VL C + LG M + D+ + ++ G+ G E A + M
Sbjct: 329 SVLDACANLTASSLGRFICDGMDEA--LAKDISVANSICNMYGKCGLPELARQTFLEMTY 386
Query: 587 KADVVIWGTLLAASRIHG 604
+ DVV W ++AA +G
Sbjct: 387 R-DVVSWTAIIAAYSQNG 403
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 100/371 (26%), Positives = 172/371 (46%), Gaps = 64/371 (17%)
Query: 26 LVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCG-LISQAKSMFDSC 84
L + L C+ +S G + +SGL+ + + +L+NLYA+ G +I+ + +FDS
Sbjct: 194 LATVLAACTRLGDLSSGALVRDGAIQSGLDRDAVVGTTLVNLYARFGDVIAAREVLFDSM 253
Query: 85 STLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFR 144
V+ N M++ + +N R+++A ++F + P K +S+ +MI GF QN ++ALE+FR
Sbjct: 254 KDRTVVSWNAMVTAFAQNARVDEAEKLFREMPDKSVISWNAMIAGFGQNGRPKQALELFR 313
Query: 145 DMRILGVIPNEVTLASVISSSVHLGGIWECRML-HGLVIKLMIDGFVIISTNLLNMYCVC 203
M + G+ P+ +T SV+ + +L R + G+ L D + ++ ++ NMY C
Sbjct: 314 RMDLEGLQPSRMTYCSVLDACANLTASSLGRFICDGMDEALAKD--ISVANSICNMYGKC 371
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYL 263
AR F EM R++VSW ++ +++ G
Sbjct: 372 GLPELARQTFLEMTYRDVVSWTAIIAAYSQNGYS-------------------------- 405
Query: 264 QVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDF 323
SEAL ++R M+ G+ PN + +++ +SAC F EG I S +V Y
Sbjct: 406 -----SEALDIFRIMVQAGVEPNGITLINTLSACSHGALFDEGSDIFSSLVSGD---YYG 457
Query: 324 IQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ-KR 382
+ A HF A I+L LG R G ++DA L M K
Sbjct: 458 VTANESHFLCA---IDL------LG----------------RAGYLKDAETLITKMPFKA 492
Query: 383 DVYSWSAMISG 393
+W++++S
Sbjct: 493 GAVAWTSLLSA 503
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 135/329 (41%), Gaps = 82/329 (24%)
Query: 367 GMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAG--VKPNEITMVS 424
G +EDAR +F++M R+ +SW+ +IS Y + AL L+ +V + ++ + S
Sbjct: 6 GRLEDARAVFDSMPLRNEFSWAIIISAYVGAGKEQEALCLYRTLVRSSTEIQADAFIFSS 65
Query: 425 VFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRT 484
V A A L++G HE ++ + + L A++ MYAKCG I+ A +VF I R
Sbjct: 66 VLAACARLKCLEQGLEIHERIVKRGVKQDVGLQNALVTMYAKCGRIDRAKQVFDRITHR- 124
Query: 485 TSVSPWNAIICGLAMHGDANLTLKIYSDLEKRN--------------------------- 517
V WNA++ A G + LKIY ++ +
Sbjct: 125 -DVVSWNAMVSANAEAGHLEVALKIYQEMVSADVLCWSTMISAEAMAGHDREALELYREM 183
Query: 518 ---IKLNSITFIGVLSTCCHAG--------------------------LVDLGERY---- 544
++ N+ T VL+ C G LV+L R+
Sbjct: 184 ILSVRPNASTLATVLAACTRLGDLSSGALVRDGAIQSGLDRDAVVGTTLVNLYARFGDVI 243
Query: 545 ------FKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLA 598
F SMK V + MV + ++++AE++ R MP K+ V+ W ++A
Sbjct: 244 AAREVLFDSMKDRTVVS-----WNAMVTAFAQNARVDEAEKLFREMPDKS-VISWNAMIA 297
Query: 599 A----SRIHGNVEVGERAAKSLAGLQPSH 623
R +E+ R L GLQPS
Sbjct: 298 GFGQNGRPKQALELFRRM--DLEGLQPSR 324
>gi|449433131|ref|XP_004134351.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Cucumis sativus]
Length = 895
Score = 293 bits (749), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 177/639 (27%), Positives = 305/639 (47%), Gaps = 97/639 (15%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+ S L C + +AV +G +H +I K G+ + I N L+++Y K
Sbjct: 223 FTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKF------------ 270
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
+RL +AR VF K +K V++ +MI G+AQ ++++F
Sbjct: 271 -------------------ERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLF 311
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
DM I G +P+ +++ S I + G + + +H +I GF
Sbjct: 312 MDM-IDGFVPDMLSITSTIRACGQSGDLQVGKFVHKYLIG---SGF-------------- 353
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYL 263
E + V+ N++++ +AK G + A+E+F+ KD V+W ++I+GY
Sbjct: 354 --------------ECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYT 399
Query: 264 QVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDF 323
Q E L ++ M + P+ V V L+S + +G IH ++K GF+
Sbjct: 400 QSGYYKEGLESFKMMKMER-KPDSVTFVLLLSIFSQLADINQGRGIHCDVIKFGFEAELI 458
Query: 324 IQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRD 383
I +++ YA CG + +D ++F+ M D
Sbjct: 459 IGNSLLDVYAKCGEM-------------------------------DDLLKVFSYMSAHD 487
Query: 384 VYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHE 443
+ SW+ +I+ + + ++ + M G+ P+E T++ + + ++G+ H
Sbjct: 488 IISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLAVRRQGKEIHG 547
Query: 444 YVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDA 503
Y+ + N + A+I+MY+KCGS+ +VF +++++ V W A+I M+G+
Sbjct: 548 YIFKSGFESNVPIGNALIEMYSKCGSLENCIKVFKYMKEK--DVVTWTALISAFGMYGEG 605
Query: 504 NLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGC 563
LK + D+E + +S+ FI + C H+G+V G R+F MK+ YN+EP ++HY C
Sbjct: 606 KKALKAFQDMELSGVLPDSVAFIAFIFACSHSGMVKEGLRFFDRMKTDYNLEPRMEHYAC 665
Query: 564 MVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSH 623
+VDLL R+G L AEE I SMPMK D +WG LL+A R GN + +R +K + L
Sbjct: 666 VVDLLARSGLLAQAEEFILSMPMKPDASLWGALLSACRARGNTNIAQRVSKKILELNSDD 725
Query: 624 GPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
VL+SNIYA G+W+ ++R M+ G+K+ PG S
Sbjct: 726 TGYYVLVSNIYATLGKWDQVKTVRNSMKTKGLKKEPGSS 764
Score = 150 bits (380), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 146/618 (23%), Positives = 250/618 (40%), Gaps = 102/618 (16%)
Query: 10 FNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYA 69
F S N E S L+ S+ Q + +HSLI SGL + LI+ YA
Sbjct: 6 FCSNFNNTPEPSQEFLRSSLLKTLSSAKNTPQLRTVHSLIITSGLSLSVIFSGKLISKYA 65
Query: 70 KCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMG 129
Q K S S + +P + S+I
Sbjct: 66 ------QVKDPISSVSVFRSI------------------------SPTNNVYLWNSIIRA 95
Query: 130 FAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGF 189
N + +AL + +MR + P+ T SVI+S + + ++H +++ +
Sbjct: 96 LTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCIVHEHAMEMGFESD 155
Query: 190 VIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPS 249
+ I L++MY L AR +F+EM R+ VSWN +++G+ G E
Sbjct: 156 LYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWE----------- 204
Query: 250 KDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQI 309
+AL MY G+ P+ + ++ ACG MA EG+ +
Sbjct: 205 --------------------DALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAV 244
Query: 310 HSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQF-ELGIKDHIASWNALIAGFIRNGM 368
H +I K G I ++ Y R+ AR F ++ +KD + +WN +I G
Sbjct: 245 HGVIEKIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVKDSV-TWNTMICG------ 297
Query: 369 IEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCA 428
YAQ + +++LF M+D G P+ +++ S A
Sbjct: 298 -------------------------YAQLGRHEASVKLFMDMID-GFVPDMLSITSTIRA 331
Query: 429 IASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVS 488
SG L+ G++ H+Y++ + + +IDMYAKCG + A EVF + + +
Sbjct: 332 CGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVT- 390
Query: 489 PWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSM 548
WN++I G G L+ + + K K +S+TF+ +LS ++ G R
Sbjct: 391 -WNSLINGYTQSGYYKEGLESFK-MMKMERKPDSVTFVLLLSIFSQLADINQG-RGIHCD 447
Query: 549 KSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEV 608
+ E +L ++D+ + G+++D +V M D++ W T++A+S + V
Sbjct: 448 VIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAH-DIISWNTVIASSVHFDDCTV 506
Query: 609 GERAAKSL--AGLQPSHG 624
G + + GL P
Sbjct: 507 GFQMINEMRTEGLMPDEA 524
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 96/243 (39%), Gaps = 72/243 (29%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E ++ L CS QG++IH IFKSG ESN I N+LI +Y+KCG
Sbjct: 523 EATVLGILPMCSLLAVRRQGKEIHGYIFKSGFESNVPIGNALIEMYSKCG---------- 572
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
L + +VF K V++T++I F ++AL+
Sbjct: 573 ---------------------SLENCIKVFKYMKEKDVVTWTALISAFGMYGEGKKALKA 611
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
F+DM + GV+P+ V + I + H G + E GL
Sbjct: 612 FQDMELSGVLPDSVAFIAFIFACSHSGMVKE-----GL---------------------- 644
Query: 203 CSSLVEARSLFDEMK-----ERNIVSWNVMLNGFAKAGLVELARELFERIPSK-DVVSWG 256
FD MK E + + +++ A++GL+ A E +P K D WG
Sbjct: 645 --------RFFDRMKTDYNLEPRMEHYACVVDLLARSGLLAQAEEFILSMPMKPDASLWG 696
Query: 257 TMI 259
++
Sbjct: 697 ALL 699
>gi|302762633|ref|XP_002964738.1| hypothetical protein SELMODRAFT_583 [Selaginella moellendorffii]
gi|300166971|gb|EFJ33576.1| hypothetical protein SELMODRAFT_583 [Selaginella moellendorffii]
Length = 644
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 182/624 (29%), Positives = 311/624 (49%), Gaps = 69/624 (11%)
Query: 13 QKANLQ-NSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKC 71
Q+ L+ NS + LV+ C + G++IH+ + S+ + +SLI +Y KC
Sbjct: 88 QQMQLEGNSPDRITLVTIFEACGNPENLEDGKKIHAYL---SCNSDVVLGSSLITMYGKC 144
Query: 72 GLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFA 131
G +S+A MF S + VA N S++ F
Sbjct: 145 GSLSEACLMFQSMEEWNTVAWN-------------------------------SLMGAFV 173
Query: 132 QNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVI 191
Q+D A+E++ +M G +P+ T +V+++ L + +++H +++ + V+
Sbjct: 174 QHDRVEAAMELYWEMLQCGFLPSRPTFLTVLAAISSLESLRHGKLVHDTLVEAGHEDDVV 233
Query: 192 ISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKD 251
+ T L+NMY K G V A E+F+R+P D
Sbjct: 234 VQTALVNMY-------------------------------GKCGSVVEAVEVFDRMPRHD 262
Query: 252 VVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHS 311
V+ W +I ++ E+L ++R M +G PN+V +V ++SAC A G IH
Sbjct: 263 VILWSAVISAHVNCAEYEESLRLFRKMQLEGNRPNNVTLVSVLSACEGPQALETGKGIHE 322
Query: 312 IIVKAGFDCYDFIQATIIHFYAACGRINLARLQF-ELGIKDHIASWNALIAGFIRNGMIE 370
+V+AG++ + I+ Y CG + A F + ++ + NALI+ + R G
Sbjct: 323 CVVEAGYEGDLIVGNAIVSMYGKCGSLEDAWDVFHRVPRRNGVPIGNALISMYGRCGSFG 382
Query: 371 DARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIA 430
AR LF++M +RD +W+ M+S Q E +++LF M+ G P+++T+++V A
Sbjct: 383 KARDLFDSMAERDAVTWNTMMSVSEQLEHGRDSIQLFRQMLQEGTPPDKVTILTVLNVCA 442
Query: 431 SSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPW 490
S L+EG+ ++ + ++ N + AI++MYAKCGS + A +F ++ R +VS W
Sbjct: 443 SLPALQEGKAICAWLDHTPLSANQMIGNAILNMYAKCGSRDEARRIFSVMQGRD-AVS-W 500
Query: 491 NAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKS 550
NA+I + +I+ ++ +++TF +LS C H GL+ ++F+ M+
Sbjct: 501 NALIGAYGSYSRGRYAFQIFQAMQLEGSTPDAVTFTTILSVCSHGGLLGEAVKWFRWMRE 560
Query: 551 VYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGE 610
Y VE + HYGC+VDLLGR G++ +AEEV MP D ++W TLL+A ++HG + G+
Sbjct: 561 DYYVEAETGHYGCIVDLLGRLGRVPEAEEVAEKMPAGTDPIVWTTLLSACQVHGETQRGK 620
Query: 611 RAAKSLAGLQPSHGPSRVLLSNIY 634
RAA+ L L P + V+LS IY
Sbjct: 621 RAAERLVELDPEVTSAYVVLSTIY 644
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 115/491 (23%), Positives = 212/491 (43%), Gaps = 100/491 (20%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
LR CS +++G+QIH+ I +S + DP
Sbjct: 2 LRQCSRSKDLARGRQIHASIARSS-------------------------------APQDP 30
Query: 90 VACNIMISGYIRNDRLNDAREVFDK---TPIKCCVSYTSMIMGFAQNDCWREALEVFRDM 146
V N +I Y++ L DA +VF + T + V++T++I +A+N + A+ +F+ M
Sbjct: 31 VVGNWLIQMYLKCGSLIDASQVFYQLLETSVVNLVAWTALIAAYARNGQTKLAIRLFQQM 90
Query: 147 RILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSL 206
++ G P+ +TL ++ + + + + + +H L + V++ ++L+ MY C SL
Sbjct: 91 QLEGNSPDRITLVTIFEACGNPENLEDGKKIHAY---LSCNSDVVLGSSLITMYGKCGSL 147
Query: 207 VEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVE 266
EA +F M+E WN V+W +++ ++Q +
Sbjct: 148 SEACLMFQSMEE-----WNT--------------------------VAWNSLMGAFVQHD 176
Query: 267 RLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQA 326
R+ A+ +Y ML G P+ + +++A + G +H +V+AG + +Q
Sbjct: 177 RVEAAMELYWEMLQCGFLPSRPTFLTVLAAISSLESLRHGKLVHDTLVEAGHEDDVVVQT 236
Query: 327 TIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYS 386
+++ Y CG + +A ++F+ M + DV
Sbjct: 237 ALVNMYGKCGS-------------------------------VVEAVEVFDRMPRHDVIL 265
Query: 387 WSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVL 446
WSA+IS + + +L LF M G +PN +T+VSV A L+ G+ HE V+
Sbjct: 266 WSAVISAHVNCAEYEESLRLFRKMQLEGNRPNNVTLVSVLSACEGPQALETGKGIHECVV 325
Query: 447 NNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLT 506
+ + AI+ MY KCGS+ A++VF+ + R V NA+I G
Sbjct: 326 EAGYEGDLIVGNAIVSMYGKCGSLEDAWDVFHRV-PRRNGVPIGNALISMYGRCGSFGKA 384
Query: 507 LKIYSDLEKRN 517
++ + +R+
Sbjct: 385 RDLFDSMAERD 395
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 150/301 (49%), Gaps = 15/301 (4%)
Query: 357 NALIAGFIRNGMIEDARQLFNNMQKRDVY---SWSAMISGYAQNEQPNMALELFHGMVDA 413
N LI +++ G + DA Q+F + + V +W+A+I+ YA+N Q +A+ LF M
Sbjct: 34 NWLIQMYLKCGSLIDASQVFYQLLETSVVNLVAWTALIAAYARNGQTKLAIRLFQQMQLE 93
Query: 414 GVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTA 473
G P+ IT+V++F A + L++G+ H Y+ NS + L +++I MY KCGS++ A
Sbjct: 94 GNSPDRITLVTIFEACGNPENLEDGKKIHAYLSCNSDVV---LGSSLITMYGKCGSLSEA 150
Query: 474 FEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCC 533
+F + + T WN+++ H +++Y ++ + + TF+ VL+
Sbjct: 151 CLMFQSMEEWNTVA--WNSLMGAFVQHDRVEAAMELYWEMLQCGFLPSRPTFLTVLAAIS 208
Query: 534 HAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIW 593
+ G+ ++ + E D+ +V++ G+ G + +A EV MP + DV++W
Sbjct: 209 SLESLRHGKLVHDTLVEAGH-EDDVVVQTALVNMYGKCGSVVEAVEVFDRMP-RHDVILW 266
Query: 594 GTLLAASRIHGNVEVGERAAKSLAGLQ-PSHGPSRVLLSNIYADAGRWEDAFSIRKEMRD 652
+++A H N E + + +Q + P+ V L ++ + A A K + +
Sbjct: 267 SAVISA---HVNCAEYEESLRLFRKMQLEGNRPNNVTLVSVLS-ACEGPQALETGKGIHE 322
Query: 653 C 653
C
Sbjct: 323 C 323
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 84/179 (46%), Gaps = 6/179 (3%)
Query: 430 ASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRT-TSVS 488
+ S L GR H + +S + + +I MY KCGS+ A +VFY + + + ++
Sbjct: 6 SRSKDLARGRQIHASIARSSAPQDPVVGNWLIQMYLKCGSLIDASQVFYQLLETSVVNLV 65
Query: 489 PWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSM 548
W A+I A +G L ++++ ++ + IT + + C + ++ G K +
Sbjct: 66 AWTALIAAYARNGQTKLAIRLFQQMQLEGNSPDRITLVTIFEACGNPENLEDG----KKI 121
Query: 549 KSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVE 607
+ + D+ ++ + G+ G L +A + +SM + + V W +L+ A H VE
Sbjct: 122 HAYLSCNSDVVLGSSLITMYGKCGSLSEACLMFQSME-EWNTVAWNSLMGAFVQHDRVE 179
>gi|224124578|ref|XP_002330058.1| predicted protein [Populus trichocarpa]
gi|222871483|gb|EEF08614.1| predicted protein [Populus trichocarpa]
Length = 568
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 168/471 (35%), Positives = 258/471 (54%), Gaps = 60/471 (12%)
Query: 208 EARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVER 267
EAR LFD+M E N +SWN +++G+ + G++ AR++F+++P ++VVSW MI GY+Q
Sbjct: 12 EARKLFDKMPETNTISWNGLVSGYVQNGMISEARKVFDKMPERNVVSWTAMIRGYVQEGL 71
Query: 268 LSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQAT 327
+ EA ++ M + VM+ LI
Sbjct: 72 IEEAELLFWRMPERNVVSWTVMLGGLIED------------------------------- 100
Query: 328 IIHFYAACGRINLARLQFEL-GIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYS 386
GR++ AR F++ +KD +AS N +I G G + +AR++F+ M +R+V +
Sbjct: 101 --------GRVDEARQLFDMMPVKDVVASTN-MIDGLCSEGRLIEAREIFDEMPQRNVVA 151
Query: 387 WSAMISG-------------YAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSG 433
W++MISG Y + AL LF M GV+P+ +++SV S
Sbjct: 152 WTSMISGEKDDGTWSTMIKIYERKGFELEALALFSLMQREGVRPSFPSVISVLSVCGSLA 211
Query: 434 TLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTS--VSPWN 491
+L GR H ++ + ++ +S+ +I MY KCG + TA VF DR +S + WN
Sbjct: 212 SLDHGRQVHSQLVRSQFDIDIYVSSVLITMYIKCGDLVTAKRVF----DRFSSKDIVMWN 267
Query: 492 AIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSV 551
+II G A HG L+++ D+ +I + ITFIGVLS C + G V G F+SMKS
Sbjct: 268 SIIAGYAQHGFGEKALEVFHDMFSSSIAPDEITFIGVLSACSYTGKVKEGLEIFESMKSK 327
Query: 552 YNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGER 611
Y V+P +HY CMVDLLGRAG+L +A +I +MP++AD ++WG LL A R H N+++ E
Sbjct: 328 YQVDPKTEHYACMVDLLGRAGKLNEAMNLIENMPVEADAIVWGALLGACRTHKNLDLAEI 387
Query: 612 AAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
AAK L L+P++ +LLSN+Y+ RW+D +RK MR +++ PG S
Sbjct: 388 AAKKLLQLEPNNAGPYILLSNLYSSQSRWKDVVELRKTMRAKNLRKSPGCS 438
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 117/431 (27%), Positives = 204/431 (47%), Gaps = 59/431 (13%)
Query: 76 QAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDC 135
+A+ +FD + ++ N ++SGY++N +++AR+VFDK P + VS+T+MI G+ Q
Sbjct: 12 EARKLFDKMPETNTISWNGLVSGYVQNGMISEARKVFDKMPERNVVSWTAMIRGYVQEGL 71
Query: 136 WREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTN 195
EA +F M V+ V L +I G + E R L +M V+ STN
Sbjct: 72 IEEAELLFWRMPERNVVSWTVMLGGLIED----GRVDEARQL----FDMMPVKDVVASTN 123
Query: 196 LLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSW 255
+++ C L+EAR +FDEM +RN+V+W M++G KD +W
Sbjct: 124 MIDGLCSEGRLIEAREIFDEMPQRNVVAWTSMISG------------------EKDDGTW 165
Query: 256 GTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVK 315
TMI Y + EAL ++ M +G+ P+ ++ ++S CG + G Q+HS +V+
Sbjct: 166 STMIKIYERKGFELEALALFSLMQREGVRPSFPSVISVLSVCGSLASLDHGRQVHSQLVR 225
Query: 316 AGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQL 375
+ FD ++ + +I Y CG + A+ F+ I WN++IAG+ ++G E
Sbjct: 226 SQFDIDIYVSSVLITMYIKCGDLVTAKRVFDRFSSKDIVMWNSIIAGYAQHGFGEK---- 281
Query: 376 FNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTL 435
ALE+FH M + + P+EIT + V A + +G +
Sbjct: 282 ---------------------------ALEVFHDMFSSSIAPDEITFIGVLSACSYTGKV 314
Query: 436 KEGRWAHEYVLNN-SITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAII 494
KEG E + + + A ++D+ + G +N A + ++ ++ W A++
Sbjct: 315 KEGLEIFESMKSKYQVDPKTEHYACMVDLLGRAGKLNEAMNLIENMPVEADAIV-WGALL 373
Query: 495 CGLAMHGDANL 505
H + +L
Sbjct: 374 GACRTHKNLDL 384
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 143/329 (43%), Gaps = 46/329 (13%)
Query: 48 LIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLND 107
L+F E N ++ + G + +A+ +FD D VA MI G RL +
Sbjct: 77 LLFWRMPERNVVSWTVMLGGLIEDGRVDEARQLFDMMPVKDVVASTNMIDGLCSEGRLIE 136
Query: 108 AREVFDKTPIKCCVSYTSMIMGFAQNDCWR-------------EALEVFRDMRILGVIPN 154
ARE+FD+ P + V++TSMI G + W EAL +F M+ GV P+
Sbjct: 137 AREIFDEMPQRNVVAWTSMISGEKDDGTWSTMIKIYERKGFELEALALFSLMQREGVRPS 196
Query: 155 EVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFD 214
++ SV+S L + R +H +++ D + +S+ L+ MY C LV A+ +FD
Sbjct: 197 FPSVISVLSVCGSLASLDHGRQVHSQLVRSQFDIDIYVSSVLITMYIKCGDLVTAKRVFD 256
Query: 215 EMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTM 274
++IV WN ++ G+A+ G E +AL +
Sbjct: 257 RFSSKDIVMWNSIIAGYAQHGFGE-------------------------------KALEV 285
Query: 275 YRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQI-HSIIVKAGFDCYDFIQATIIHFYA 333
+ M IAP+++ + ++SAC EGL+I S+ K D A ++
Sbjct: 286 FHDMFSSSIAPDEITFIGVLSACSYTGKVKEGLEIFESMKSKYQVDPKTEHYACMVDLLG 345
Query: 334 ACGRINLARLQFE-LGIKDHIASWNALIA 361
G++N A E + ++ W AL+
Sbjct: 346 RAGKLNEAMNLIENMPVEADAIVWGALLG 374
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 95/206 (46%), Gaps = 33/206 (16%)
Query: 25 ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSC 84
+++S L C + ++ G+Q+HS + +S + + ++ + LI +Y KCG + AK +FD
Sbjct: 199 SVISVLSVCGSLASLDHGRQVHSQLVRSQFDIDIYVSSVLITMYIKCGDLVTAKRVFDRF 258
Query: 85 STLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFR 144
S+ D V N +I+GY ++ GF + +ALEVF
Sbjct: 259 SSKDIVMWNSIIAGYAQH--------------------------GFGE-----KALEVFH 287
Query: 145 DMRILGVIPNEVTLASVISSSVHLGGIWE-CRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
DM + P+E+T V+S+ + G + E + + K +D ++++
Sbjct: 288 DMFSSSIAPDEITFIGVLSACSYTGKVKEGLEIFESMKSKYQVDPKTEHYACMVDLLGRA 347
Query: 204 SSLVEARSLFDEMK-ERNIVSWNVML 228
L EA +L + M E + + W +L
Sbjct: 348 GKLNEAMNLIENMPVEADAIVWGALL 373
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 127/292 (43%), Gaps = 49/292 (16%)
Query: 360 IAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGV---- 415
+AG+ +N +AR+LF+ M + + SW+ ++SGY QN + A ++F M + V
Sbjct: 1 MAGYFQNKRPREARKLFDKMPETNTISWNGLVSGYVQNGMISEARKVFDKMPERNVVSWT 60
Query: 416 --------------------KPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDN 455
+ E +VS + G +++GR L + + + D
Sbjct: 61 AMIRGYVQEGLIEEAELLFWRMPERNVVS--WTVMLGGLIEDGRVDEARQLFDMMPVKDV 118
Query: 456 L-SAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIY---- 510
+ S +ID G + A E+F + R +V W ++I G G + +KIY
Sbjct: 119 VASTNMIDGLCSEGRLIEAREIFDEMPQR--NVVAWTSMISGEKDDGTWSTMIKIYERKG 176
Query: 511 ---------SDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSM-KSVYNVEPDLKH 560
S +++ ++ + + I VLS C +D G + + +S +++ D+
Sbjct: 177 FELEALALFSLMQREGVRPSFPSVISVLSVCGSLASLDHGRQVHSQLVRSQFDI--DIYV 234
Query: 561 YGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERA 612
++ + + G L A+ V K D+V+W +++A HG GE+A
Sbjct: 235 SSVLITMYIKCGDLVTAKRVFDRFSSK-DIVMWNSIIAGYAQHG---FGEKA 282
>gi|449468660|ref|XP_004152039.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like [Cucumis sativus]
Length = 697
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 169/507 (33%), Positives = 269/507 (53%), Gaps = 39/507 (7%)
Query: 195 NLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGL----VELARELFERIPSK 250
LLN CS++ E L M + N + +++ F A V F ++ +
Sbjct: 138 TLLNRIKNCSTINELHGLCASMIKTNAIQDCFLVHQFISASFALNSVHYPVFAFTQMENP 197
Query: 251 DVVSWGTMIDGYLQVERLSEALTMYRAMLCDG-IAPNDVMIVDLISACGRAMAFGEGLQI 309
+V + MI G++ AL Y ML + + P L+ AC A G +
Sbjct: 198 NVFVYNAMIKGFVYCGYPFRALQCYVHMLEESNVLPTSYTFSSLVKACTFMCAVELGQMV 257
Query: 310 HSIIVKAGFDCYDFIQATIIHFY-------------------------------AACGRI 338
H I K GF+ + F+Q ++ FY A G +
Sbjct: 258 HCHIWKKGFESHLFVQTALVDFYSKLEILSEARKVFDEMCERDAFAWTAMVSALARVGDM 317
Query: 339 NLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNE 398
+ AR FE + + A+WN +I G+ R G +E A LFN M +D+ SW+ MI+ Y+QN+
Sbjct: 318 DSARKLFEEMPERNTATWNTMIDGYARLGNVESAELLFNQMPTKDIISWTTMITCYSQNK 377
Query: 399 QPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSA 458
Q AL ++ M G+ P+E+TM +V A A G L+ G+ H YV++ + L+ + +
Sbjct: 378 QYQDALAIYSEMRLNGIIPDEVTMSTVASACAHIGALELGKEIHHYVMSQGLNLDVYIGS 437
Query: 459 AIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNI 518
A++DMYAKCGS++ + +F+ + D+ ++ WNA+I GLA+HG A L++++ +E+ I
Sbjct: 438 ALVDMYAKCGSLDLSLLIFFKLTDK--NLYCWNAVIEGLAVHGYAEKALRMFAIMEREKI 495
Query: 519 KLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAE 578
N +TFI +LS C HAGLVD G F SM Y++ PD++HYGCMVD+L ++G L +A
Sbjct: 496 MPNGVTFISILSACTHAGLVDEGRSRFLSMTRDYDIRPDIRHYGCMVDMLSKSGYLNEAL 555
Query: 579 EVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAG 638
E+I+SM + + +IWG LL ++HGN E+ E A + L L+P + LL ++YA+
Sbjct: 556 ELIKSMEFEPNSIIWGALLNGCKLHGNCEIAEDAVEQLMILEPMNSGHYNLLVSMYAEEK 615
Query: 639 RWEDAFSIRKEMRDCGM-KRLPGFSGV 664
W + IR M++ G+ K+ PG S +
Sbjct: 616 DWMEVAHIRSMMKEKGVEKKYPGSSWI 642
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 113/483 (23%), Positives = 204/483 (42%), Gaps = 69/483 (14%)
Query: 60 IQNSLINLYAKCGLISQ----AKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKT 115
+ +L+N C I++ SM + + D + IS + ++ F +
Sbjct: 135 FKQTLLNRIKNCSTINELHGLCASMIKTNAIQDCFLVHQFISASFALNSVHYPVFAFTQM 194
Query: 116 PIKCCVSYTSMIMGFAQNDCWREALEVFRDM-RILGVIPNEVTLASVISSSVHLGGIWEC 174
Y +MI GF AL+ + M V+P T +S++ + + +
Sbjct: 195 ENPNVFVYNAMIKGFVYCGYPFRALQCYVHMLEESNVLPTSYTFSSLVKACTFMCAVELG 254
Query: 175 RMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKA 234
+M+H + K + + + T L++ Y L EAR +FDEM ER+ +W M++ A+
Sbjct: 255 QMVHCHIWKKGFESHLFVQTALVDFYSKLEILSEARKVFDEMCERDAFAWTAMVSALARV 314
Query: 235 GLVELARELFERIPSKDVVSWGTMIDGYL------------------------------- 263
G ++ AR+LFE +P ++ +W TMIDGY
Sbjct: 315 GDMDSARKLFEEMPERNTATWNTMIDGYARLGNVESAELLFNQMPTKDIISWTTMITCYS 374
Query: 264 QVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDF 323
Q ++ +AL +Y M +GI P++V + + SAC A G +IH ++ G + +
Sbjct: 375 QNKQYQDALAIYSEMRLNGIIPDEVTMSTVASACAHIGALELGKEIHHYVMSQGLNLDVY 434
Query: 324 IQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRD 383
I + ++ YA CG ++L+ L F ++ WNA+I G +G E A ++F M++
Sbjct: 435 IGSALVDMYAKCGSLDLSLLIFFKLTDKNLYCWNAVIEGLAVHGYAEKALRMFAIMEREK 494
Query: 384 VYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAH- 442
+ PN +T +S+ A +G + EGR
Sbjct: 495 -------------------------------IMPNGVTFISILSACTHAGLVDEGRSRFL 523
Query: 443 EYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGD 502
+ I + ++DM +K G +N A E+ + S+ W A++ G +HG+
Sbjct: 524 SMTRDYDIRPDIRHYGCMVDMLSKSGYLNEALELIKSMEFEPNSII-WGALLNGCKLHGN 582
Query: 503 ANL 505
+
Sbjct: 583 CEI 585
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 109/427 (25%), Positives = 199/427 (46%), Gaps = 79/427 (18%)
Query: 13 QKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCG 72
+++N+ + Y + S ++ C+ AV GQ +H I+K G ES+ F+Q +L++ Y+K
Sbjct: 227 EESNVLPTSYTFS--SLVKACTFMCAVELGQMVHCHIWKKGFESHLFVQTALVDFYSKLE 284
Query: 73 LISQAKSMFDSCSTLDPVAC-------------------------------NIMISGYIR 101
++S+A+ +FD D A N MI GY R
Sbjct: 285 ILSEARKVFDEMCERDAFAWTAMVSALARVGDMDSARKLFEEMPERNTATWNTMIDGYAR 344
Query: 102 NDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASV 161
+ A +F++ P K +S+T+MI ++QN +++AL ++ +MR+ G+IP+EVT+++V
Sbjct: 345 LGNVESAELLFNQMPTKDIISWTTMITCYSQNKQYQDALAIYSEMRLNGIIPDEVTMSTV 404
Query: 162 ISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNI 221
S+ H+G + + +H V+ ++ V I + L++MY C SL + +F ++ ++N+
Sbjct: 405 ASACAHIGALELGKEIHHYVMSQGLNLDVYIGSALVDMYAKCGSLDLSLLIFFKLTDKNL 464
Query: 222 VSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCD 281
WN ++ G A G E +AL M+ M +
Sbjct: 465 YCWNAVIEGLAVHGYAE-------------------------------KALRMFAIMERE 493
Query: 282 GIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHF------YAAC 335
I PN V + ++SAC A EG S + D YD I+ I H+ +
Sbjct: 494 KIMPNGVTFISILSACTHAGLVDEG---RSRFLSMTRD-YD-IRPDIRHYGCMVDMLSKS 548
Query: 336 GRINLA-RLQFELGIKDHIASWNALIAGFIRNG---MIEDARQLFNNMQKRDVYSWSAMI 391
G +N A L + + + W AL+ G +G + EDA + ++ + ++ ++
Sbjct: 549 GYLNEALELIKSMEFEPNSIIWGALLNGCKLHGNCEIAEDAVEQLMILEPMNSGHYNLLV 608
Query: 392 SGYAQNE 398
S YA+ +
Sbjct: 609 SMYAEEK 615
>gi|218194084|gb|EEC76511.1| hypothetical protein OsI_14286 [Oryza sativa Indica Group]
Length = 656
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 187/589 (31%), Positives = 291/589 (49%), Gaps = 66/589 (11%)
Query: 100 IRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLA 159
+++ RL DA ++FD+ P K V++TS++ G +N AL +F DM GV PN+
Sbjct: 59 VKSGRLADALDLFDRMPRKNVVAWTSVMSGCTRNGRPEAALAMFADMVESGVAPNDFACN 118
Query: 160 SVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKER 219
+ + + LG + +H L ++ G I + L+ MY C SL A+ +FD M
Sbjct: 119 AALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSP 178
Query: 220 NIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAML 279
++V + +++ F + G ELA +EAL ML
Sbjct: 179 DVVGYTSLISAFCRNGEFELA----------------------------AEALIQ---ML 207
Query: 280 CDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKA-GFDCYDFIQAT-IIHFYA---- 333
G+ PN+ + +++AC R + G QIH ++K G +T +I FY+
Sbjct: 208 KQGLKPNEHTMTTILTACPRVL----GQQIHGYLIKKIGLRSQSVYSSTALIDFYSRNEG 263
Query: 334 -------------ACGRINLARLQFELGIKDHIAS----WNALIAGFIRNGMIEDARQLF 376
ACG I L R IK + + NAL++ + R G++E+ +
Sbjct: 264 VDPNEFALSIVLGACGSIGLGRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELEAML 323
Query: 377 NNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLK 436
N ++ D+ SW+ IS QN A+ L M G PN SV + A +L
Sbjct: 324 NKIENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLD 383
Query: 437 EGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINT---AFEVFYHIRDRTTSVSPWNAI 493
+G H L A+I+MY+KCG + + AF+V + T V+ WN++
Sbjct: 384 QGMQFHCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMH-----THDVTSWNSL 438
Query: 494 ICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYN 553
I G A HGDAN L+++S + IK + TF+GVL C H+G+V+ GE +F+ M Y+
Sbjct: 439 IHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSGMVEEGELFFRLMIDQYS 498
Query: 554 VEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAA 613
P HY CM+D+LGR G+ ++A +I MP + D +IW TLLA+ ++H N+++G+ AA
Sbjct: 499 FTPAPSHYACMIDMLGRNGRFDEALRMINDMPFEPDALIWKTLLASCKLHRNLDIGKLAA 558
Query: 614 KSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
L L S VL+SNIYA G WEDA +R+ M + G+K+ G S
Sbjct: 559 DRLMELSDRDSASYVLMSNIYAMHGEWEDARKVRRRMDETGVKKDAGCS 607
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 118/478 (24%), Positives = 203/478 (42%), Gaps = 90/478 (18%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
+ A +AL C+ A+ G+Q+HSL ++G + +I + LI +Y++CG + AK
Sbjct: 114 DFACNAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAK---- 169
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
EVFD+ V YTS+I F +N + A E
Sbjct: 170 ---------------------------EVFDRMDSPDVVGYTSLISAFCRNGEFELAAEA 202
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKL--MIDGFVIISTNLLNMY 200
M G+ PNE T+ +++++ + G + +HG +IK + V ST L++ Y
Sbjct: 203 LIQMLKQGLKPNEHTMTTILTACPRVLG----QQIHGYLIKKIGLRSQSVYSSTALIDFY 258
Query: 201 C-----------------VCSSLVEARSLFDEMKERNIVS----WNVMLNGFAKAGLVEL 239
C S+ R L + ++++ N +L+ + + GLVE
Sbjct: 259 SRNEGVDPNEFALSIVLGACGSIGLGRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEE 318
Query: 240 ARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGR 299
+ +I + D+VSW T I Q +A+ + M +G PN ++S+C
Sbjct: 319 LEAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCAD 378
Query: 300 AMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNAL 359
+ +G+Q H + +K G D +I+ Y+ CG++ ARL F++ + SWN+L
Sbjct: 379 VASLDQGMQFHCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSL 438
Query: 360 IAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNE 419
I G +AQ+ N ALE+F M G+KP++
Sbjct: 439 IHG-------------------------------HAQHGDANKALEVFSKMRSNGIKPDD 467
Query: 420 ITMVSVFCAIASSGTLKEGRWAHEYVLNN-SITLNDNLSAAIIDMYAKCGSINTAFEV 476
T + V SG ++EG +++ S T + A +IDM + G + A +
Sbjct: 468 STFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEALRM 525
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 98/416 (23%), Positives = 170/416 (40%), Gaps = 59/416 (14%)
Query: 228 LNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPND 287
LN K+G + A +LF+R+P K+VV+W +++ G + R AL M+ M+ G+APND
Sbjct: 55 LNRLVKSGRLADALDLFDRMPRKNVVAWTSVMSGCTRNGRPEAALAMFADMVESGVAPND 114
Query: 288 VMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFEL 347
+ AC A G Q+HS+ V+AGF +I + +I Y+ CG + A+ F+
Sbjct: 115 FACNAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDR 174
Query: 348 GIKDHIASWNALIAGFIRNGMIEDARQLFNNMQK-------------------------- 381
+ + +LI+ F RNG E A + M K
Sbjct: 175 MDSPDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTACPRVLGQQIH 234
Query: 382 -----------RDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIA 430
+ VYS +A+I Y++NE GV PNE + V +
Sbjct: 235 GYLIKKIGLRSQSVYSSTALIDFYSRNE---------------GVDPNEFALSIV---LG 276
Query: 431 SSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPW 490
+ G++ GR H + + + + +S A++ MY + G + + I + + W
Sbjct: 277 ACGSIGLGRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELEAMLNKIEN--PDLVSW 334
Query: 491 NAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKS 550
I +G + + + N F VLS+C +D G + F +
Sbjct: 335 TTAISANFQNGFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQ-FHCLAL 393
Query: 551 VYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNV 606
+ ++ ++++ + GQ+ A M DV W +L+ HG+
Sbjct: 394 KLGCDSEICTGNALINMYSKCGQMGSARLAFDVMHTH-DVTSWNSLIHGHAQHGDA 448
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 104/263 (39%), Gaps = 44/263 (16%)
Query: 25 ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSC 84
A S L C+ ++ QG Q H L K G +S N+LIN+Y+KCG + A+ FD
Sbjct: 368 AFSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVM 427
Query: 85 STLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFR 144
T D S+ S+I G AQ+ +ALEVF
Sbjct: 428 HTHD-------------------------------VTSWNSLIHGHAQHGDANKALEVFS 456
Query: 145 DMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTN-----LLNM 199
MR G+ P++ T V+ H G + E L +LMID + +++M
Sbjct: 457 KMRSNGIKPDDSTFLGVLMGCNHSGMVEEGE----LFFRLMIDQYSFTPAPSHYACMIDM 512
Query: 200 YCVCSSLVEARSLFDEMK-ERNIVSWNVMLNG---FAKAGLVELARELFERIPSKDVVSW 255
EA + ++M E + + W +L + +LA + + +D S+
Sbjct: 513 LGRNGRFDEALRMINDMPFEPDALIWKTLLASCKLHRNLDIGKLAADRLMELSDRDSASY 572
Query: 256 GTMIDGYLQVERLSEALTMYRAM 278
M + Y +A + R M
Sbjct: 573 VLMSNIYAMHGEWEDARKVRRRM 595
>gi|449523934|ref|XP_004168978.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
mitochondrial-like [Cucumis sativus]
Length = 664
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 197/640 (30%), Positives = 318/640 (49%), Gaps = 108/640 (16%)
Query: 93 NIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVI 152
N IS IR R+N+ARE+FD T +++ MI + + +A ++F +M
Sbjct: 61 NKKISYLIRTGRINEARELFDSTEHWNTITWNRMITAYVKRREMLKARQLFEEM------ 114
Query: 153 PNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSL 212
PN ++S W LM+ G++ C + AR++
Sbjct: 115 PNR----DIVS--------W----------NLMLSGYI---------SCGGKFVERARNM 143
Query: 213 FDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEAL 272
FD+M E + VSWN ML+G+AK+G ++ A ELF +P ++VVSW M+ GYL + +A+
Sbjct: 144 FDQMPETDCVSWNTMLSGYAKSGTMDKAEELFNEMPERNVVSWNAMVSGYLMNGHVEKAI 203
Query: 273 TMYRAM----------LCDGIAPNDVMIV---------------DLISACGRAMAFGEGL 307
++ M L G+ ND ++ DL+ A +A G G
Sbjct: 204 EFFKLMPKRDSASLRALVSGLIQNDKLVEAERILLQYGGNVGKGDLVDAYNTLIA-GYGQ 262
Query: 308 QIHSIIVKAGFD----CYD--FIQATIIHF------YAACGRINLARLQFELGIKDHIAS 355
+ + + FD C D + + +I + Y G I AR F+ ++ S
Sbjct: 263 KGMAYEARKLFDRIPLCCDCGYSRRNVISWNSMIMCYVRAGDIVSARELFDKMVERDTFS 322
Query: 356 WNALIAGFIRNGMIEDARQLFNNMQKRD-------------------------------V 384
WN +I+G+++ +++A LF+ M + D +
Sbjct: 323 WNTMISGYVQILDMKEASNLFSRMPEPDTLSWNMMISGFSEIGSLKLAHDLFKRIPEKSL 382
Query: 385 YSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEY 444
SW++MISGY +NE A+ +F M G KP+ T+ S+ A A L G H+
Sbjct: 383 VSWNSMISGYEKNEDYKGAMNIFLQMQLEGKKPDRHTLSSILSACAGLVDLVLGTQIHQL 442
Query: 445 VLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDAN 504
V I + ++ +++ MY++CG+I A VF + + +S WNA+I G A HG A
Sbjct: 443 VTKAFIA-DLPINNSLVTMYSRCGAIVEARMVFDEMNLQRDVIS-WNAMIGGYAYHGFAT 500
Query: 505 LTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCM 564
L+++ +++ N++ + ITFI VL+ C HAGL++ G R F SM + + ++P ++HY +
Sbjct: 501 EALQLFDLMKQCNVQPSYITFISVLNACAHAGLIEEGRREFNSMVNTHGIKPQVEHYAAL 560
Query: 565 VDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHG 624
VD++GR GQLE+A +I SMP + D +WG LL A ++H NVE+ AA++L LQP
Sbjct: 561 VDIIGRHGQLEEAMSLINSMPCEPDKAVWGALLGACKVHNNVEMARAAAEALMKLQPESS 620
Query: 625 PSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
VLL N+YAD GRW+DA +R M +++ G+S V
Sbjct: 621 APYVLLHNMYADVGRWDDAAEMRTMMEKNNVQKDAGYSRV 660
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 125/499 (25%), Positives = 223/499 (44%), Gaps = 79/499 (15%)
Query: 49 IFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDA 108
+F E++ N++++ YAK G + +A+ +F+ + V+ N M+SGY+ N + A
Sbjct: 143 MFDQMPETDCVSWNTMLSGYAKSGTMDKAEELFNEMPERNVVSWNAMVSGYLMNGHVEKA 202
Query: 109 REVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV-------------------------- 142
E F P + S +++ G QND EA +
Sbjct: 203 IEFFKLMPKRDSASLRALVSGLIQNDKLVEAERILLQYGGNVGKGDLVDAYNTLIAGYGQ 262
Query: 143 ----FRDMRILGVIP----------NEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDG 188
+ ++ IP N ++ S+I V G I R L M++
Sbjct: 263 KGMAYEARKLFDRIPLCCDCGYSRRNVISWNSMIMCYVRAGDIVSAREL----FDKMVER 318
Query: 189 FVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIP 248
+++ Y + EA +LF M E + +SWN+M++GF++ G ++LA +LF+RIP
Sbjct: 319 DTFSWNTMISGYVQILDMKEASNLFSRMPEPDTLSWNMMISGFSEIGSLKLAHDLFKRIP 378
Query: 249 SKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQ 308
K +VSW +MI GY + E A+ ++ M +G P+ + ++SAC + G Q
Sbjct: 379 EKSLVSWNSMISGYEKNEDYKGAMNIFLQMQLEGKKPDRHTLSSILSACAGLVDLVLGTQ 438
Query: 309 IHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQF-ELGIKDHIASWNALIAGFIRNG 367
IH ++ KA F I +++ Y+ CG I AR+ F E+ ++ + SWNA+I G+ +G
Sbjct: 439 IHQLVTKA-FIADLPINNSLVTMYSRCGAIVEARMVFDEMNLQRDVISWNAMIGGYAYHG 497
Query: 368 MIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFC 427
+A QLF+ M++ V+P+ IT +SV
Sbjct: 498 FATEALQLFDLMKQ-------------------------------CNVQPSYITFISVLN 526
Query: 428 AIASSGTLKEGRWAHEYVLN-NSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTS 486
A A +G ++EGR ++N + I AA++D+ + G + A + +
Sbjct: 527 ACAHAGLIEEGRREFNSMVNTHGIKPQVEHYAALVDIIGRHGQLEEAMSLINSMPCEPDK 586
Query: 487 VSPWNAIICGLAMHGDANL 505
+ W A++ +H + +
Sbjct: 587 -AVWGALLGACKVHNNVEM 604
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/250 (20%), Positives = 110/250 (44%), Gaps = 19/250 (7%)
Query: 355 SWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAG 414
S N I+ IR G I +AR+LF++ + + +W+ MI+ Y + + A +LF M +
Sbjct: 59 SLNKKISYLIRTGRINEARELFDSTEHWNTITWNRMITAYVKRREMLKARQLFEEMPNRD 118
Query: 415 VKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAF 474
+ + M+S + + + + + ++ N LS YAK G+++ A
Sbjct: 119 IVSWNL-MLSGYISCGGKFVERARNMFDQMPETDCVSWNTMLSG-----YAKSGTMDKAE 172
Query: 475 EVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCH 534
E+F + +R +V WNA++ G M+G ++ + + KR +S + ++S
Sbjct: 173 ELFNEMPER--NVVSWNAMVSGYLMNGHVEKAIEFFKLMPKR----DSASLRALVSGLIQ 226
Query: 535 AGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPM-------K 587
+ ER + Y ++ G+ G +A ++ +P+ +
Sbjct: 227 NDKLVEAERILLQYGGNVGKGDLVDAYNTLIAGYGQKGMAYEARKLFDRIPLCCDCGYSR 286
Query: 588 ADVVIWGTLL 597
+V+ W +++
Sbjct: 287 RNVISWNSMI 296
>gi|18418348|ref|NP_567948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635622|sp|O81767.2|PP348_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g33990; AltName: Full=Protein EMBRYO DEFECTIVE 2758
gi|332660906|gb|AEE86306.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 823
Score = 292 bits (748), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 187/645 (28%), Positives = 318/645 (49%), Gaps = 103/645 (15%)
Query: 21 DYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSM 80
DY S L+ C V G +IH L K G + ++ SLI+LY+
Sbjct: 152 DYR-TFPSVLKACRT---VIDGNKIHCLALKFGFMWDVYVAASLIHLYS----------- 196
Query: 81 FDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREAL 140
R + +AR +FD+ P++ S+ +MI G+ Q+ +EAL
Sbjct: 197 --------------------RYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEAL 236
Query: 141 EVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMY 200
+ +R + + VT+ S++S+ G +H IK ++ + +S L+++Y
Sbjct: 237 TLSNGLRAM----DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLY 292
Query: 201 CVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMID 260
A+ G + +++F+R+ +D++SW ++I
Sbjct: 293 -------------------------------AEFGRLRDCQKVFDRMYVRDLISWNSIIK 321
Query: 261 GYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDC 320
Y E+ A+++++ M I P+ + ++ L S + + ++ G+
Sbjct: 322 AYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGW-- 379
Query: 321 YDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ 380
F++ I NA++ + + G+++ AR +FN +
Sbjct: 380 --FLEDITIG--------------------------NAVVVMYAKLGLVDSARAVFNWLP 411
Query: 381 KRDVYSWSAMISGYAQNEQPNMALELFHGMVDAG-VKPNEITMVSVFCAIASSGTLKEGR 439
DV SW+ +ISGYAQN + A+E+++ M + G + N+ T VSV A + +G L++G
Sbjct: 412 NTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGM 471
Query: 440 WAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAM 499
H +L N + L+ + ++ DMY KCG + A +FY I R SV PWN +I
Sbjct: 472 KLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQI-PRVNSV-PWNTLIACHGF 529
Query: 500 HGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLK 559
HG + ++ ++ +K + ITF+ +LS C H+GLVD G+ F+ M++ Y + P LK
Sbjct: 530 HGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLK 589
Query: 560 HYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGL 619
HYGCMVD+ GRAGQLE A + I+SM ++ D IWG LL+A R+HGNV++G+ A++ L +
Sbjct: 590 HYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEV 649
Query: 620 QPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
+P H VLLSN+YA AG+WE IR G+++ PG+S +
Sbjct: 650 EPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSM 694
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 163/620 (26%), Positives = 274/620 (44%), Gaps = 116/620 (18%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
RYC+ + + +H+ + S N I L+NLY G ++ A+ FD D
Sbjct: 61 FRYCTN---LQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDV 117
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
A N+MISGY R ++ EV I+C +F M
Sbjct: 118 YAWNLMISGY---GRAGNSSEV-----IRC--------------------FSLF--MLSS 147
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
G+ P+ T SV+ + + + +H L +K V ++ +L+++Y ++ A
Sbjct: 148 GLTPDYRTFPSVLKAC---RTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNA 204
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLS 269
R LFDEM R++ SWN M++G+ ++G
Sbjct: 205 RILFDEMPVRDMGSWNAMISGYCQSG-------------------------------NAK 233
Query: 270 EALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATII 329
EALT+ + A + V +V L+SAC A F G+ IHS +K G + F+ +I
Sbjct: 234 EALTLSNGLR----AMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLI 289
Query: 330 HFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSA 389
YA GR + D +++F+ M RD+ SW++
Sbjct: 290 DLYAEFGR-------------------------------LRDCQKVFDRMYVRDLISWNS 318
Query: 390 MISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNS 449
+I Y NEQP A+ LF M + ++P+ +T++S+ ++ G ++ R + L
Sbjct: 319 IIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKG 378
Query: 450 ITLND-NLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLK 508
L D + A++ MYAK G +++A VF + + T V WN II G A +G A+ ++
Sbjct: 379 WFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPN--TDVISWNTIISGYAQNGFASEAIE 436
Query: 509 IYSDLEKR-NIKLNSITFIGVLSTCCHAGLVDLGER-YFKSMKSVYNVEPDLKHYGCMVD 566
+Y+ +E+ I N T++ VL C AG + G + + + +K+ + D+ + D
Sbjct: 437 MYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKN--GLYLDVFVVTSLAD 494
Query: 567 LLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSL--AGLQPSHG 624
+ G+ G+LEDA + +P + + V W TL+A HG+ E K + G++P H
Sbjct: 495 MYGKCGRLEDALSLFYQIP-RVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHI 553
Query: 625 PSRVLLSNI----YADAGRW 640
LLS D G+W
Sbjct: 554 TFVTLLSACSHSGLVDEGQW 573
>gi|224073108|ref|XP_002303975.1| predicted protein [Populus trichocarpa]
gi|222841407|gb|EEE78954.1| predicted protein [Populus trichocarpa]
Length = 508
Score = 292 bits (748), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 166/450 (36%), Positives = 253/450 (56%), Gaps = 15/450 (3%)
Query: 225 NVMLNGFAKA----GLVELARELFERIP-SKDVVSWGTMIDGYLQVERLSEA-LTMYRAM 278
N++L+ F A G A LF I + D+ + +I +A + +Y +
Sbjct: 10 NLLLSRFIHACSSLGFYSYAYSLFTSITHAPDIYLYNNIIKALSSSPTHPKASIFLYNNI 69
Query: 279 LCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGR- 337
G+ P+ + A R + G Q+HS ++ G + + Y++ G
Sbjct: 70 QLAGLRPDSYSFPFALKAVTRFSSIQTGRQLHSQSIRFGLHSDLHVLTAFVQMYSSFGSG 129
Query: 338 -INLARLQFE---LGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISG 393
I AR F+ + D +A WNA++ G+ ++G + +AR LF M +R+V SW+A+I+G
Sbjct: 130 CICDARKMFDGMSMSTGD-VALWNAMLNGYAKHGDLCNARDLFERMPQRNVISWTALITG 188
Query: 394 YAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLN-NSITL 452
YAQ +P+ A+ LF M V+P+EI M+ A A G L+ G W Y+ +T
Sbjct: 189 YAQANRPHDAIALFRRMQLENVEPDEIAMLVALTACARLGALELGEWIRHYIDRLGLLTT 248
Query: 453 NDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSD 512
N L+ A+IDMYAK G I +A +VF ++ +T + W +I GLA+HG L+++S
Sbjct: 249 NIPLNNALIDMYAKSGDIKSALQVFENMNHKT--IITWTTMIAGLALHGLGTEALEMFSR 306
Query: 513 LEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAG 572
+E+ +K N ITFI +LS C H GLV G YF M S Y +EP ++HYGCM+DLLGRAG
Sbjct: 307 MERARVKPNDITFIAILSACSHVGLVQTGRWYFNRMISRYGIEPKIEHYGCMIDLLGRAG 366
Query: 573 QLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSN 632
L++A+ ++ MP + + VIWG+LLAA HG+ E+GE A + L L+P + + LLSN
Sbjct: 367 HLKEAQTLLAQMPFEPNAVIWGSLLAACNTHGDPELGELALQHLLELEPDNSGNYALLSN 426
Query: 633 IYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
IYA GRW ++ +RK M D G+K++PG S
Sbjct: 427 IYASRGRWNESRVVRKVMWDAGVKKMPGGS 456
Score = 155 bits (391), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 98/378 (25%), Positives = 178/378 (47%), Gaps = 44/378 (11%)
Query: 137 REALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNL 196
+ ++ ++ ++++ G+ P+ + + + I R LH I+ + + + T
Sbjct: 60 KASIFLYNNIQLAGLRPDSYSFPFALKAVTRFSSIQTGRQLHSQSIRFGLHSDLHVLTAF 119
Query: 197 LNMY------CVCSSLVEARSLFD--EMKERNIVSWNVMLNGFAKAGLVELARELFERIP 248
+ MY C+C +AR +FD M ++ WN MLNG+AK G + AR+LFER+P
Sbjct: 120 VQMYSSFGSGCIC----DARKMFDGMSMSTGDVALWNAMLNGYAKHGDLCNARDLFERMP 175
Query: 249 SKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQ 308
++V+SW +I GY Q R +A+ ++R M + + P+++ ++ ++AC R A G
Sbjct: 176 QRNVISWTALITGYAQANRPHDAIALFRRMQLENVEPDEIAMLVALTACARLGALELGEW 235
Query: 309 IHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGM 368
I I + G + +I NALI + ++G
Sbjct: 236 IRHYIDRLGL------------------------------LTTNIPLNNALIDMYAKSGD 265
Query: 369 IEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCA 428
I+ A Q+F NM + + +W+ MI+G A + ALE+F M A VKPN+IT +++ A
Sbjct: 266 IKSALQVFENMNHKTIITWTTMIAGLALHGLGTEALEMFSRMERARVKPNDITFIAILSA 325
Query: 429 IASSGTLKEGRWAHEYVLNN-SITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSV 487
+ G ++ GRW +++ I +ID+ + G + A + + +V
Sbjct: 326 CSHVGLVQTGRWYFNRMISRYGIEPKIEHYGCMIDLLGRAGHLKEAQTLLAQMPFEPNAV 385
Query: 488 SPWNAIICGLAMHGDANL 505
W +++ HGD L
Sbjct: 386 I-WGSLLAACNTHGDPEL 402
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 105/447 (23%), Positives = 195/447 (43%), Gaps = 85/447 (19%)
Query: 11 NSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAK 70
N Q A L+ Y AL+ + ++ G+Q+HS + GL S+ + + + +Y+
Sbjct: 68 NIQLAGLRPDSYSFPF--ALKAVTRFSSIQTGRQLHSQSIRFGLHSDLHVLTAFVQMYSS 125
Query: 71 --CGLISQAKSMFD--SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSM 126
G I A+ MFD S ST D N M++GY ++ L +AR++F++ P + +S+T++
Sbjct: 126 FGSGCICDARKMFDGMSMSTGDVALWNAMLNGYAKHGDLCNARDLFERMPQRNVISWTAL 185
Query: 127 IMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMI 186
I G+AQ + +A+ +FR M++ V P+E+ + +++ LG + E G I+ I
Sbjct: 186 ITGYAQANRPHDAIALFRRMQLENVEPDEIAMLVALTACARLGAL-EL----GEWIRHYI 240
Query: 187 DGFVIISTN------LLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELA 240
D +++TN L++MY + A +F+ M + I++W M+ G A GL A
Sbjct: 241 DRLGLLTTNIPLNNALIDMYAKSGDIKSALQVFENMNHKTIITWTTMIAGLALHGLGTEA 300
Query: 241 RELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRA 300
E+F R M RA + PND+ + ++SAC
Sbjct: 301 LEMFSR---------------------------MERAR----VKPNDITFIAILSACS-- 327
Query: 301 MAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALI 360
H +V+ GR R+ GI+ I + +I
Sbjct: 328 ---------HVGLVQ-------------------TGRWYFNRMISRYGIEPKIEHYGCMI 359
Query: 361 AGFIRNGMIEDARQLFNNMQ-KRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNE 419
R G +++A+ L M + + W ++++ + P + +++ ++P+
Sbjct: 360 DLLGRAGHLKEAQTLLAQMPFEPNAVIWGSLLAACNTHGDPELGELALQHLLE--LEPDN 417
Query: 420 ITMVSVFCAIASSGTLKEGRWAHEYVL 446
++ I +S GRW V+
Sbjct: 418 SGNYALLSNIYAS----RGRWNESRVV 440
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 119/271 (43%), Gaps = 45/271 (16%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGL-ESNTFIQNSLINLYAKCGLISQAKSMF 81
E+A++ AL C+ A+ G+ I I + GL +N + N+LI++YAK G I
Sbjct: 214 EIAMLVALTACARLGALELGEWIRHYIDRLGLLTTNIPLNNALIDMYAKSGDI------- 266
Query: 82 DSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALE 141
A +VF+ K +++T+MI G A + EALE
Sbjct: 267 ------------------------KSALQVFENMNHKTIITWTTMIAGLALHGLGTEALE 302
Query: 142 VFRDMRILGVIPNEVTLASVISSSVHLG----GIWEC-RMLHGLVIKLMIDGFVIISTNL 196
+F M V PN++T +++S+ H+G G W RM+ I+ I+ + +
Sbjct: 303 MFSRMERARVKPNDITFIAILSACSHVGLVQTGRWYFNRMISRYGIEPKIEHYGC----M 358
Query: 197 LNMYCVCSSLVEARSLFDEMK-ERNIVSWNVML---NGFAKAGLVELARELFERIPSKDV 252
+++ L EA++L +M E N V W +L N L ELA + + +
Sbjct: 359 IDLLGRAGHLKEAQTLLAQMPFEPNAVIWGSLLAACNTHGDPELGELALQHLLELEPDNS 418
Query: 253 VSWGTMIDGYLQVERLSEALTMYRAMLCDGI 283
++ + + Y R +E+ + + M G+
Sbjct: 419 GNYALLSNIYASRGRWNESRVVRKVMWDAGV 449
>gi|225450995|ref|XP_002284834.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g05240 [Vitis vinifera]
Length = 565
Score = 292 bits (748), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 188/617 (30%), Positives = 307/617 (49%), Gaps = 78/617 (12%)
Query: 62 NSLINLYAKCGLISQAKSMFDSCSTLD------PVACNIMISGYIRNDRLNDAREVFDKT 115
NS+++L KC +++ K + T P++ + Y + LN A+ VF++
Sbjct: 6 NSILSLLEKCKTMAELKRLHGLMITTSVIQDVIPLSRLVDFCAYSDSGNLNYAKSVFNQI 65
Query: 116 PIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECR 175
+ SMI G++ ++ EAL ++R+MR G P+ T V+ + + G +
Sbjct: 66 DRPSLYIWNSMIKGYSISESPDEALTMYREMRQKGYAPDHFTFPFVLKACSLVNGYNLGQ 125
Query: 176 MLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAG 235
+H ++K + V +T LL MY C G
Sbjct: 126 CVHNCIVKTGFEVDVYAATALLQMYAAC-------------------------------G 154
Query: 236 LVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLIS 295
+E A ++F+ IP +VV+W ++I G + + SEA+ +Y+ M +APN++ +V+++
Sbjct: 155 DMEAALKVFDDIPKWNVVAWTSLIAGCISNDCPSEAVRVYKDMELWSVAPNEITMVNVLV 214
Query: 296 ACGRAMAFGEGLQIHSIIVKAGFDCY------DFIQAT-IIHFYAACGRINLARLQFELG 348
AC R+ G +H + G D + + I AT I+ YA CG +
Sbjct: 215 ACARSRDLNAGRWVHDRTGQMGLDPFQSNSNFNVILATAIVDMYAKCGSL---------- 264
Query: 349 IKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFH 408
+ AR LFN M R++ +W++MI Y Q Q N AL+LF
Sbjct: 265 ---------------------KTARDLFNKMPHRNLVAWNSMIGAYNQYGQANEALDLFS 303
Query: 409 GMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCG 468
M AG P++ T + V A A G L G+ H YV ++T + + A++DMYAK G
Sbjct: 304 DMRIAGFDPDKATFLCVIGACAHLGALVSGQALHAYVSKTNLTDDTAIGTALVDMYAKSG 363
Query: 469 SINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKL-NSITFIG 527
A +VF ++ + V+ W ++I GLAMHG L + +++ + + IT+IG
Sbjct: 364 DAERAQQVFSELQKK--DVTAWTSLIIGLAMHGHGEEALTFFKKMQEDTALIPDEITYIG 421
Query: 528 VLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMK 587
VLS C H G V+ G+ +F SMK+V+ +EP +HYGCMVDLL RAG+L +AE ++ MP++
Sbjct: 422 VLSACSHVGKVEDGKNHFISMKNVHGIEPTTQHYGCMVDLLSRAGRLGEAERLVEKMPVE 481
Query: 588 ADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIR 647
+ IW LL +I+ N++V +R + + L+ VLLSNIYA A RWE+ R
Sbjct: 482 PNTAIWSALLNGCKIYQNIDVADRVRRRVRELEVDGSGVYVLLSNIYAGACRWEEVKMAR 541
Query: 648 KEMRDCGMKRLPGFSGV 664
+ M++ +++ G S V
Sbjct: 542 ELMKERKIQKSLGHSSV 558
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 114/480 (23%), Positives = 194/480 (40%), Gaps = 103/480 (21%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
L+ CS + GQ +H+ I K+G E + + +L+ +YA CG
Sbjct: 112 LKACSLVNGYNLGQCVHNCIVKTGFEVDVYAATALLQMYAACG----------------- 154
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
+ A +VFD P V++TS+I G NDC EA+ V++DM +
Sbjct: 155 --------------DMEAALKVFDDIPKWNVVAWTSLIAGCISNDCPSEAVRVYKDMELW 200
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGF-------VIISTNLLNMYCV 202
V PNE+T+ +V+ + + R +H ++ +D F VI++T +++MY
Sbjct: 201 SVAPNEITMVNVLVACARSRDLNAGRWVHDRTGQMGLDPFQSNSNFNVILATAIVDMYAK 260
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
C SL AR LF++M RN+V+WN +MI Y
Sbjct: 261 CGSLKTARDLFNKMPHRNLVAWN-------------------------------SMIGAY 289
Query: 263 LQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD 322
Q + +EAL ++ M G P+ + +I AC A G +H+ + K
Sbjct: 290 NQYGQANEALDLFSDMRIAGFDPDKATFLCVIGACAHLGALVSGQALHAYVSKTNLTDDT 349
Query: 323 FIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKR 382
I ++ YA G A+ F K + +W +LI G +G E+A F MQ+
Sbjct: 350 AIGTALVDMYAKSGDAERAQQVFSELQKKDVTAWTSLIIGLAMHGHGEEALTFFKKMQE- 408
Query: 383 DVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAH 442
D + P+EIT + V A + G +++G+ H
Sbjct: 409 -----------------------------DTALIPDEITYIGVLSACSHVGKVEDGK-NH 438
Query: 443 EYVLNN--SITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMH 500
+ N I ++D+ ++ G + A E + + W+A++ G ++
Sbjct: 439 FISMKNVHGIEPTTQHYGCMVDLLSRAGRLGEA-ERLVEKMPVEPNTAIWSALLNGCKIY 497
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 83/351 (23%), Positives = 151/351 (43%), Gaps = 74/351 (21%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLES-------NTFIQNSLINLYAKCGLIS 75
E+ +V+ L C+ ++ G+ +H + GL+ N + +++++YAKCG
Sbjct: 206 EITMVNVLVACARSRDLNAGRWVHDRTGQMGLDPFQSNSNFNVILATAIVDMYAKCG--- 262
Query: 76 QAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDC 135
L AR++F+K P + V++ SMI + Q
Sbjct: 263 ----------------------------SLKTARDLFNKMPHRNLVAWNSMIGAYNQYGQ 294
Query: 136 WREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTN 195
EAL++F DMRI G P++ T VI + HLG + + LH V K + I T
Sbjct: 295 ANEALDLFSDMRIAGFDPDKATFLCVIGACAHLGALVSGQALHAYVSKTNLTDDTAIGTA 354
Query: 196 LLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSW 255
L++MY A+ +F E++++++ +W ++ G A G E
Sbjct: 355 LVDMYAKSGDAERAQQVFSELQKKDVTAWTSLIIGLAMHGHGE----------------- 397
Query: 256 GTMIDGYLQVERLSEALTMYRAMLCD-GIAPNDVMIVDLISACGRAMAFGEGLQIHSIIV 314
EALT ++ M D + P+++ + ++SAC +G + H I +
Sbjct: 398 --------------EALTFFKKMQEDTALIPDEITYIGVLSACSHVGKVEDG-KNHFISM 442
Query: 315 K--AGFDCYDFIQATIIHFYAACGRINLA-RLQFELGIKDHIASWNALIAG 362
K G + ++ + GR+ A RL ++ ++ + A W+AL+ G
Sbjct: 443 KNVHGIEPTTQHYGCMVDLLSRAGRLGEAERLVEKMPVEPNTAIWSALLNG 493
>gi|413938252|gb|AFW72803.1| hypothetical protein ZEAMMB73_565260 [Zea mays]
Length = 709
Score = 292 bits (748), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 198/634 (31%), Positives = 313/634 (49%), Gaps = 98/634 (15%)
Query: 91 ACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILG 150
A N ++ Y++ L+ A + D+ P + +Y +I + +AL F DM G
Sbjct: 64 AANSLLHAYLQCGLLSRALRLLDEMPRRDAATYAPLISAHCRLGAPLDALRAFLDMLAWG 123
Query: 151 ----------VIPNEVTLASVISSSVHLGGIWECRMLHGLVIK--LMIDGFVIISTNLLN 198
V PNE T A+V+ + RM+HG ++ D FV+ S L+N
Sbjct: 124 CSDEEGVDDVVRPNEFTAAAVVQACGLARDERLARMVHGYLVAGGFCDDPFVLGS--LVN 181
Query: 199 MYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTM 258
MY AK G V AR L +P +DVVSW +
Sbjct: 182 MY-------------------------------AKVGDVASARRLLLGLPCRDVVSWTAI 210
Query: 259 IDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISAC---GRAMAFGEGLQIHSIIVK 315
+ G + L EAL ++ ML DG+ PN+V ++ +I AC G + FG +H+++V
Sbjct: 211 VSGCVLNAMLEEALGVFLMMLEDGVLPNNVTMLSVIQACALMGASELFG---PVHALVVL 267
Query: 316 AGFDCYDFIQATIIHFYAACGRINLARLQFE----------------------------- 346
+ + ++I YA G + A F+
Sbjct: 268 LELEHDASVVNSLIMMYAKNGFVEEAIRLFKGFYLKTGSVCSNEDVLAAVLYGCTISGSV 327
Query: 347 ------------LGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGY 394
+G I+ N+L+ + R I+ A +F M+ +D+ SW+ +IS
Sbjct: 328 KNGEGLHAHTIKMGAFPSISVENSLMGMYARFEQIDAALLVFEGMEVKDIVSWNTIISCL 387
Query: 395 AQNEQPNMALELF---HGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSIT 451
A+ ++ N A+++F H G+ P+ +T++S+ A +++G L +G+ H YV+ +
Sbjct: 388 AKTDRVNEAMDIFSVLHAAAGGGLAPDFVTVLSMLQACSNAGLLHQGQMLHGYVMKSGFV 447
Query: 452 LNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYS 511
+ ++ A+I MYAK G I+ A E+ + D VS WN++I MHGD + L+++
Sbjct: 448 YDVSICNALISMYAKLGRIDFA-EMIFERMDIKDLVS-WNSMINAYGMHGDGHSALRVFH 505
Query: 512 DLEKRNIKL-NSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGR 570
L+ N+ITF+ V+S C H+GLV G + F+SM + +EP + HY C+VDLLGR
Sbjct: 506 QLKDAGTPAPNAITFVSVISACSHSGLVSEGHKCFESMGRDHGIEPSMDHYACVVDLLGR 565
Query: 571 AGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLL 630
+G+ +AE+ IR MP++ D IWG LLAA ++HGNV++ E+AAK L+ L+P RV L
Sbjct: 566 SGRFAEAEQFIRDMPVRPDSTIWGPLLAACQLHGNVDLAEKAAKELSALEPESDIWRVSL 625
Query: 631 SNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
SN YA GRW DA IR EMR G+++ G+S V
Sbjct: 626 SNTYASVGRWRDAAKIRSEMRRVGLRKETGWSFV 659
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 129/519 (24%), Positives = 218/519 (42%), Gaps = 113/519 (21%)
Query: 43 QQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRN 102
+ +H + G + F+ SL+N+YAK G ++ A
Sbjct: 158 RMVHGYLVAGGFCDDPFVLGSLVNMYAKVGDVASA------------------------- 192
Query: 103 DRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVI 162
R + P + VS+T+++ G N EAL VF M GV+PN VT+ SVI
Sbjct: 193 ------RRLLLGLPCRDVVSWTAIVSGCVLNAMLEEALGVFLMMLEDGVLPNNVTMLSVI 246
Query: 163 SSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDE--MKERN 220
+ +G +H LV+ L ++ + +L+ MY + EA LF +K +
Sbjct: 247 QACALMGASELFGPVHALVVLLELEHDASVVNSLIMMYAKNGFVEEAIRLFKGFYLKTGS 306
Query: 221 IVS---------------------------------------WNVMLNGFAKAGLVELAR 241
+ S N ++ +A+ ++ A
Sbjct: 307 VCSNEDVLAAVLYGCTISGSVKNGEGLHAHTIKMGAFPSISVENSLMGMYARFEQIDAAL 366
Query: 242 ELFERIPSKDVVSWGTMIDGYLQVERLSEALTMY---RAMLCDGIAPNDVMIVDLISACG 298
+FE + KD+VSW T+I + +R++EA+ ++ A G+AP+ V ++ ++ AC
Sbjct: 367 LVFEGMEVKDIVSWNTIISCLAKTDRVNEAMDIFSVLHAAAGGGLAPDFVTVLSMLQACS 426
Query: 299 RAMAFGEGLQIHSIIVKAGFDCYDF-IQATIIHFYAACGRINLARLQFE-LGIKDHIASW 356
A +G +H ++K+GF YD I +I YA GRI+ A + FE + IKD + SW
Sbjct: 427 NAGLLHQGQMLHGYVMKSGF-VYDVSICNALISMYAKLGRIDFAEMIFERMDIKD-LVSW 484
Query: 357 NALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVK 416
N +MI+ Y + + AL +FH + DAG
Sbjct: 485 N-------------------------------SMINAYGMHGDGHSALRVFHQLKDAGTP 513
Query: 417 -PNEITMVSVFCAIASSGTLKEGRWAHEYV-LNNSITLNDNLSAAIIDMYAKCGSINTAF 474
PN IT VSV A + SG + EG E + ++ I + + A ++D+ + G A
Sbjct: 514 APNAITFVSVISACSHSGLVSEGHKCFESMGRDHGIEPSMDHYACVVDLLGRSGRFAEAE 573
Query: 475 EVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDL 513
+ + R S + W ++ +HG+ +L K +L
Sbjct: 574 QFIRDMPVRPDS-TIWGPLLAACQLHGNVDLAEKAAKEL 611
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 84/341 (24%), Positives = 153/341 (44%), Gaps = 62/341 (18%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+ ++S ++ C+ A +H+L+ LE + + NSLI +YAK G + +A +F
Sbjct: 240 VTMLSVIQACALMGASELFGPVHALVVLLELEHDASVVNSLIMMYAKNGFVEEAIRLFKG 299
Query: 84 --------CSTLDPVAC---------------------------------NIMISGYIRN 102
CS D +A N ++ Y R
Sbjct: 300 FYLKTGSVCSNEDVLAAVLYGCTISGSVKNGEGLHAHTIKMGAFPSISVENSLMGMYARF 359
Query: 103 DRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL---GVIPNEVTLA 159
++++ A VF+ +K VS+ ++I A+ D EA+++F + G+ P+ VT+
Sbjct: 360 EQIDAALLVFEGMEVKDIVSWNTIISCLAKTDRVNEAMDIFSVLHAAAGGGLAPDFVTVL 419
Query: 160 SVISSSVHLGGIWECRMLHGLVIKLMIDGFVI---ISTNLLNMYCVCSSLVEARSLFDEM 216
S++ + + G + + +MLHG V+K GFV I L++MY + A +F+ M
Sbjct: 420 SMLQACSNAGLLHQGQMLHGYVMK---SGFVYDVSICNALISMYAKLGRIDFAEMIFERM 476
Query: 217 KERNIVSWNVMLNGFAKAGLVELARELFERI-----PSKDVVSWGTMIDGYLQVERLSEA 271
+++VSWN M+N + G A +F ++ P+ + +++ ++I +SE
Sbjct: 477 DIKDLVSWNSMINAYGMHGDGHSALRVFHQLKDAGTPAPNAITFVSVISACSHSGLVSEG 536
Query: 272 LTMYRAMLCD-GIAP---NDVMIVDLISACGRAMAFGEGLQ 308
+ +M D GI P + +VDL+ GR F E Q
Sbjct: 537 HKCFESMGRDHGIEPSMDHYACVVDLLGRSGR---FAEAEQ 574
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 126/274 (45%), Gaps = 20/274 (7%)
Query: 353 IASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGM-- 410
+A+ N+L+ +++ G++ A +L + M +RD +++ +IS + + P AL F M
Sbjct: 62 LAAANSLLHAYLQCGLLSRALRLLDEMPRRDAATYAPLISAHCRLGAPLDALRAFLDMLA 121
Query: 411 --------VDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIID 462
VD V+PNE T +V A + + R H Y++ + + ++++
Sbjct: 122 WGCSDEEGVDDVVRPNEFTAAAVVQACGLARDERLARMVHGYLVAGGFCDDPFVLGSLVN 181
Query: 463 MYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNS 522
MYAK G + +A + + R V W AI+ G ++ L ++ + + + N+
Sbjct: 182 MYAKVGDVASARRLLLGLPCR--DVVSWTAIVSGCVLNAMLEEALGVFLMMLEDGVLPNN 239
Query: 523 ITFIGVLSTCCHAGLVDL-GERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVI 581
+T + V+ C G +L G + ++ + +E D ++ + + G +E+A +
Sbjct: 240 VTMLSVIQACALMGASELFGPVH--ALVVLLELEHDASVVNSLIMMYAKNGFVEEAIRLF 297
Query: 582 RSMPMKADVV-----IWGTLLAASRIHGNVEVGE 610
+ +K V + +L I G+V+ GE
Sbjct: 298 KGFYLKTGSVCSNEDVLAAVLYGCTISGSVKNGE 331
>gi|297738941|emb|CBI28186.3| unnamed protein product [Vitis vinifera]
Length = 760
Score = 292 bits (748), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 213/676 (31%), Positives = 327/676 (48%), Gaps = 129/676 (19%)
Query: 42 GQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIR 101
G QIH+ SG S+ + NSL+N+Y K GL +A +F++ + D V+ N ++SG+ R
Sbjct: 97 GCQIHAFAISSGFISHVTVPNSLMNMYCKAGLFDRALVVFENLNNPDIVSWNTVLSGFQR 156
Query: 102 NDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASV 161
+D +AL M GV + VT +V
Sbjct: 157 SD----------------------------------DALNFALRMNFTGVAFDAVTCTTV 182
Query: 162 IS-SSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARS--------- 211
++ S H G I+ + LH ++K +D V + L+ MY C LVEAR
Sbjct: 183 LAFCSDHEGFIFGFQ-LHSRILKCGLDCEVFVGNALITMYSRCCRLVEARRGNSGLEAIL 241
Query: 212 LFDEM----------------------KE----RNIVSW-------------NVMLNGFA 232
+F EM KE R I S NV+++ ++
Sbjct: 242 VFLEMLKEGMKLDHVSFTGAISACGHGKEFELGRQIHSLAVKIGYDTHVKVCNVLISTYS 301
Query: 233 KAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSE--ALTMYRAMLCDGIAPNDVMI 290
K +E A+ +FE I ++VVSW TMI +SE A +++ M DG+ PNDV
Sbjct: 302 KCEDIEDAKLVFESIIDRNVVSWTTMIS-------ISEEDATSLFNEMRRDGVYPNDVTF 354
Query: 291 VDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIK 350
V LI A EG IH + VK F +N++
Sbjct: 355 VGLIHAITMKNLVEEGQMIHGVCVKTSF----------------LSELNVS--------- 389
Query: 351 DHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGM 410
N+LI + + + D+ ++F + R++ SW+++ISGYAQN AL+ F
Sbjct: 390 ------NSLITMYAKFESMSDSMKVFEELNYREIISWNSLISGYAQNGLWQEALQTFLSA 443
Query: 411 VDAGVKPNEITMVSVFCAIASSG--TLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCG 468
+ +PNE T SV +IAS+ +++ G+ H ++L + N +S+A++DMYAK G
Sbjct: 444 LMES-RPNEFTFGSVLSSIASAEAISMRHGQRCHSHILKLGLNTNPIVSSALLDMYAKRG 502
Query: 469 SINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGV 528
SI + VF + W AII A HGD + ++ D+E+ +K +SITF+ V
Sbjct: 503 SICESLGVFSETPLKNEVA--WTAIISAHARHGDYEAVMNLFKDMEREGVKPDSITFLAV 560
Query: 529 LSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKA 588
++ C G+VD G + F SM + +EP +HY MVD+LGRAG+L++AEE + +P A
Sbjct: 561 ITACGRKGMVDTGYQLFNSMVKDHLIEPSPEHYSSMVDMLGRAGRLKEAEEFVGQIPGGA 620
Query: 589 DVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRK 648
+ + +LL A RIHGNV++ +R A L ++P S VL+SN+YA+ G WE IRK
Sbjct: 621 GLSVLQSLLGACRIHGNVDMAKRVADDLIEMEPMGSGSYVLMSNLYAEKGEWEKVAKIRK 680
Query: 649 EMRDCGMKRLPGFSGV 664
MR+ G+++ GFS V
Sbjct: 681 GMRERGVRKEIGFSWV 696
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 138/556 (24%), Positives = 235/556 (42%), Gaps = 110/556 (19%)
Query: 110 EVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPN--EVTLASVISS--- 164
+ D++P S ++ + + EAL++F+ G + N +VT+A V+ +
Sbjct: 33 QPLDQSPQTTIASLNRSMLTALRRNLSLEALDLFKKQLQWGFVGNIDQVTVAIVLKACCG 92
Query: 165 SVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSW 224
LG C+ +H I V + +L+NMYC A +F+ + +IVSW
Sbjct: 93 DSKLG----CQ-IHAFAISSGFISHVTVPNSLMNMYCKAGLFDRALVVFENLNNPDIVSW 147
Query: 225 NVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIA 284
N +L+GF +R +AL M G+A
Sbjct: 148 NTVLSGF----------------------------------QRSDDALNFALRMNFTGVA 173
Query: 285 PNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARL- 343
+ V +++ C F G Q+HS I+K G DC F+ +I Y+ C R+ AR
Sbjct: 174 FDAVTCTTVLAFCSDHEGFIFGFQLHSRILKCGLDCEVFVGNALITMYSRCCRLVEARRG 233
Query: 344 ------------------------------------QFELGIK-----------DHIASW 356
+FELG + H+
Sbjct: 234 NSGLEAILVFLEMLKEGMKLDHVSFTGAISACGHGKEFELGRQIHSLAVKIGYDTHVKVC 293
Query: 357 NALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVK 416
N LI+ + + IEDA+ +F ++ R+V SW+ MIS ++ A LF+ M GV
Sbjct: 294 NVLISTYSKCEDIEDAKLVFESIIDRNVVSWTTMISISEED-----ATSLFNEMRRDGVY 348
Query: 417 PNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEV 476
PN++T V + AI ++EG+ H + S N+S ++I MYAK S++ + +V
Sbjct: 349 PNDVTFVGLIHAITMKNLVEEGQMIHGVCVKTSFLSELNVSNSLITMYAKFESMSDSMKV 408
Query: 477 FYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIY--SDLEKRNIKLNSITFIGVLSTCCH 534
F + R + WN++I G A +G L+ + + +E R N TF VLS+
Sbjct: 409 FEELNYR--EIISWNSLISGYAQNGLWQEALQTFLSALMESRP---NEFTFGSVLSSIAS 463
Query: 535 AGLVDL--GER-YFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVV 591
A + + G+R + +K N P + ++D+ + G + ++ V P+K +V
Sbjct: 464 AEAISMRHGQRCHSHILKLGLNTNPIVS--SALLDMYAKRGSICESLGVFSETPLKNEVA 521
Query: 592 IWGTLLAASRIHGNVE 607
W +++A HG+ E
Sbjct: 522 -WTAIISAHARHGDYE 536
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 126/539 (23%), Positives = 227/539 (42%), Gaps = 122/539 (22%)
Query: 27 VSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAK-------- 78
+ L +CS H G Q+HS I K GL+ F+ N+LI +Y++C + +A+
Sbjct: 180 TTVLAFCSDHEGFIFGFQLHSRILKCGLDCEVFVGNALITMYSRCCRLVEARRGNSGLEA 239
Query: 79 -----SMFDSCSTLDPVA-----------------------------------CNIMISG 98
M LD V+ CN++IS
Sbjct: 240 ILVFLEMLKEGMKLDHVSFTGAISACGHGKEFELGRQIHSLAVKIGYDTHVKVCNVLIST 299
Query: 99 YIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTL 158
Y + + + DA+ VF+ + VS+T+MI ++ D A +F +MR GV PN+VT
Sbjct: 300 YSKCEDIEDAKLVFESIIDRNVVSWTTMI-SISEED----ATSLFNEMRRDGVYPNDVTF 354
Query: 159 ASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKE 218
+I + + E +M+HG+ +K + +S +L+ MY S+ ++ +F+E+
Sbjct: 355 VGLIHAITMKNLVEEGQMIHGVCVKTSFLSELNVSNSLITMYAKFESMSDSMKVFEELNY 414
Query: 219 RNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAM 278
R I+SWN +++G+A+ GL W EAL + +
Sbjct: 415 REIISWNSLISGYAQNGL------------------W-------------QEALQTFLSA 443
Query: 279 LCDGIAPNDVMIVDLIS--ACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACG 336
L + PN+ ++S A A++ G + HS I+K G + + + ++ YA G
Sbjct: 444 LMES-RPNEFTFGSVLSSIASAEAISMRHGQRCHSHILKLGLNTNPIVSSALLDMYAKRG 502
Query: 337 RINLARLQF-ELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYA 395
I + F E +K+ +A W A+I+ R+G E LF +M++
Sbjct: 503 SICESLGVFSETPLKNEVA-WTAIISAHARHGDYEAVMNLFKDMERE------------- 548
Query: 396 QNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG-RWAHEYVLNNSITLND 454
GVKP+ IT ++V A G + G + + V ++ I +
Sbjct: 549 ------------------GVKPDSITFLAVITACGRKGMVDTGYQLFNSMVKDHLIEPSP 590
Query: 455 NLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDL 513
++++DM + G + A E I +S +++ +HG+ ++ ++ DL
Sbjct: 591 EHYSSMVDMLGRAGRLKEAEEFVGQIPG-GAGLSVLQSLLGACRIHGNVDMAKRVADDL 648
>gi|302782567|ref|XP_002973057.1| hypothetical protein SELMODRAFT_98472 [Selaginella moellendorffii]
gi|300159658|gb|EFJ26278.1| hypothetical protein SELMODRAFT_98472 [Selaginella moellendorffii]
Length = 531
Score = 292 bits (747), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 174/565 (30%), Positives = 288/565 (50%), Gaps = 40/565 (7%)
Query: 99 YIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTL 158
Y + + +AR+VFD + VS+TSMI +A N EAL++++ M G+ P+ +T
Sbjct: 2 YGKCGSVEEARKVFDGIKNRDAVSWTSMISSYANNGFCDEALDLYQQMDADGIQPDSITF 61
Query: 159 ASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKE 218
S + + L + + +H ++ ++ + + L+NMY C + AR F++++
Sbjct: 62 TSALLACTKLA---DGKAIHARIVSSNMESD-FVGSALINMYARCGDVSSARQAFEKIQN 117
Query: 219 RNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAM 278
+++V W ++ Y+Q EAL +Y M
Sbjct: 118 KHVVCWTSLMT-------------------------------AYVQTGHYREALDLYGRM 146
Query: 279 LCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRI 338
+G+ + V V + AC A EG IH + + GF + ++ YA CG +
Sbjct: 147 DHEGVHADGVTYVTALGACASLGALKEGKAIHLRVSECGFQSL-VVHTALLTMYAKCGEL 205
Query: 339 NLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNE 398
+ AR F + ++A NAL+ + + G +E A+ F ++D+ SW+AMI YAQ+
Sbjct: 206 DAARAVFNR-LASNVAVQNALVTMYAKCGSLELAKSAFEASGRKDLVSWNAMIGAYAQHG 264
Query: 399 QPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVL-NNSITLNDNLS 457
AL+L+ M GV P+E+T+ S A A SG+L+ GR H VL N S + +
Sbjct: 265 LGREALDLYQTMTSQGVLPDEVTIASSLSACAISGSLQLGREIHSRVLKNQSFQSSLMVQ 324
Query: 458 AAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRN 517
A+++MY +CG + TA +F + R V W A+ A G A+ L +Y ++
Sbjct: 325 TALVNMYGRCGRLETARSMFEDMGQR--DVLSWTAMTSVYAQQGHADQVLDLYLEMVLHG 382
Query: 518 IKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDA 577
I+ N ITF +L C HAGL+ G F M+S + V P +H+ CMVDLLGR+G+L DA
Sbjct: 383 IRPNEITFTSILVGCSHAGLLARGVECFLEMQSEHEVVPIREHFLCMVDLLGRSGRLRDA 442
Query: 578 EEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADA 637
E ++ SMP + D V W T+L + + H + + +RAA+ + L P + LLS+I+ A
Sbjct: 443 EALVESMPYQPDSVAWLTVLGSCKTHSDADTAKRAARRVKELDPENTSLYSLLSSIFTAA 502
Query: 638 GRWEDAFSIRKEMRDCGMKRLPGFS 662
G ++A ++ M++ G+K+ PG S
Sbjct: 503 GLPQEALEVQLSMKEMGLKKPPGQS 527
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 143/513 (27%), Positives = 235/513 (45%), Gaps = 90/513 (17%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+ SAL C+ ++ G+ IH+ I S +ES+ F+ ++LIN+YA+CG +S
Sbjct: 59 ITFTSALLACTK---LADGKAIHARIVSSNMESD-FVGSALINMYARCGDVS-------- 106
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
AR+ F+K K V +TS++ + Q +REAL+++
Sbjct: 107 -----------------------SARQAFEKIQNKHVVCWTSLMTAYVQTGHYREALDLY 143
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGF--VIISTNLLNMYC 201
M GV + VT + + + LG + E + +H +++ GF +++ T LL MY
Sbjct: 144 GRMDHEGVHADGVTYVTALGACASLGALKEGKAIH---LRVSECGFQSLVVHTALLTMYA 200
Query: 202 VCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDG 261
C L AR++F+ + N+ N ++ +AK G +ELA+ FE KD+VSW MI
Sbjct: 201 KCGELDAARAVFNRLAS-NVAVQNALVTMYAKCGSLELAKSAFEASGRKDLVSWNAMIGA 259
Query: 262 YLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVK-AGFDC 320
Y Q EAL +Y+ M G+ P++V I +SAC + + G +IHS ++K F
Sbjct: 260 YAQHGLGREALDLYQTMTSQGVLPDEVTIASSLSACAISGSLQLGREIHSRVLKNQSFQS 319
Query: 321 YDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ 380
+Q +++ Y CGR+ AR FE +M
Sbjct: 320 SLMVQTALVNMYGRCGRLETARSMFE-------------------------------DMG 348
Query: 381 KRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG-- 438
+RDV SW+AM S YAQ + L+L+ MV G++PNEIT S+ + +G L G
Sbjct: 349 QRDVLSWTAMTSVYAQQGHADQVLDLYLEMVLHGIRPNEITFTSILVGCSHAGLLARGVE 408
Query: 439 -----RWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAI 493
+ HE V L ++D+ + G + A + + + SV+ W +
Sbjct: 409 CFLEMQSEHEVVPIREHFL------CMVDLLGRSGRLRDAEALVESMPYQPDSVA-WLTV 461
Query: 494 ICGLAMHGDANLTLKI---YSDLEKRNIKLNSI 523
+ H DA+ + +L+ N L S+
Sbjct: 462 LGSCKTHSDADTAKRAARRVKELDPENTSLYSL 494
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 109/438 (24%), Positives = 174/438 (39%), Gaps = 98/438 (22%)
Query: 199 MYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTM 258
MY C S+ EAR +FD +K R+ VSW M++ +A G +
Sbjct: 1 MYGKCGSVEEARKVFDGIKNRDAVSWTSMISSYANNGFCD-------------------- 40
Query: 259 IDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGF 318
EAL +Y+ M DGI P+ + + AC + +G IH+ IV +
Sbjct: 41 -----------EALDLYQQMDADGIQPDSITFTSALLACTK---LADGKAIHARIVSSNM 86
Query: 319 DCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNN 378
+ DF+ + +I+ YA CG ++ AR FE H+ W +L+ +++ G +A L+
Sbjct: 87 ES-DFVGSALINMYARCGDVSSARQAFEKIQNKHVVCWTSLMTAYVQTGHYREALDLYGR 145
Query: 379 MQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG 438
M GV + +T V+ A AS G LKEG
Sbjct: 146 MDHE-------------------------------GVHADGVTYVTALGACASLGALKEG 174
Query: 439 RWAHEYV-----------------------------LNNSITLNDNLSAAIIDMYAKCGS 469
+ H V + N + N + A++ MYAKCGS
Sbjct: 175 KAIHLRVSECGFQSLVVHTALLTMYAKCGELDAARAVFNRLASNVAVQNALVTMYAKCGS 234
Query: 470 INTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVL 529
+ A F R VS WNA+I A HG L +Y + + + + +T L
Sbjct: 235 LELAKSAF-EASGRKDLVS-WNAMIGAYAQHGLGREALDLYQTMTSQGVLPDEVTIASSL 292
Query: 530 STCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKAD 589
S C +G + LG + + + L +V++ GR G+LE A + M + D
Sbjct: 293 SACAISGSLQLGREIHSRVLKNQSFQSSLMVQTALVNMYGRCGRLETARSMFEDMGQR-D 351
Query: 590 VVIWGTLLAASRIHGNVE 607
V+ W + + G+ +
Sbjct: 352 VLSWTAMTSVYAQQGHAD 369
>gi|413943789|gb|AFW76438.1| hypothetical protein ZEAMMB73_890738 [Zea mays]
Length = 529
Score = 292 bits (747), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 170/549 (30%), Positives = 289/549 (52%), Gaps = 39/549 (7%)
Query: 116 PIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECR 175
P++ C +I A+ + + V+ D+R G+ + T V+ + + E R
Sbjct: 10 PLRDC---NVLIRTLARRGSFSRVMAVYYDLRARGLAADSYTYPFVLRAIGTMKLSVEGR 66
Query: 176 MLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAG 235
+H +K GF + Y CS ++ + G
Sbjct: 67 KVHAAAVK---TGF------RWDAYTACS----------------------LMEMYTMLG 95
Query: 236 LVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLIS 295
+ AR +F+ +P + +V W M+ Y++ R + A+ + M G P+ V +V ++
Sbjct: 96 RADSARRVFDEMPQRFLVLWNMMMRCYIRCGRFTAAVALAVQMESGGATPDRVTLVTAVT 155
Query: 296 ACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIAS 355
AC RA G +IHS + F + ++ Y G + A FE + +I S
Sbjct: 156 ACSRAGDLNLGRRIHSYM-DGVFGFSLPVANALLDMYTKNGYLEEAVKMFEQMPERNIIS 214
Query: 356 WNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGV 415
W L++G+ G ++ AR F ++D+ W++MI+ Q+ AL LF M V
Sbjct: 215 WTILVSGYGIAGQLDKARVFFYQCTQKDLILWTSMINACVQHGSFEEALILFRDMQLQRV 274
Query: 416 KPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFE 475
+P++ T+V++ A+ G L +G W H+Y + ++ ++ L A+I+MY+KCG ++ + +
Sbjct: 275 EPDKFTVVTLLTCCANIGALDQGEWIHQYAESRNMKIDAVLGTALIEMYSKCGHVDKSLQ 334
Query: 476 VFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHA 535
+F ++ + + W AIICGLA +G A+ L+++ ++++ K + ITFIGVLS CCH
Sbjct: 335 IFGRMQGK--DAAAWTAIICGLATNGQASKALELFEEMQRSKTKPDGITFIGVLSACCHG 392
Query: 536 GLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVV-IWG 594
GLVD G+RYF++MK VY++EP ++HY C+V+LLG AG L +AE++I MP+ D + ++G
Sbjct: 393 GLVDEGQRYFQAMKEVYHIEPRIEHYSCLVNLLGHAGLLYEAEKLITDMPVNNDTMPLFG 452
Query: 595 TLLAASRIHGNVEVGERAAKSLAGLQPSHGPS-RVLLSNIYADAGRWEDAFSIRKEMRDC 653
LL A + +GNVE+ E K +A S P VL+SN+YA A RWE+A +R +M +
Sbjct: 453 ALLTACKANGNVEMSEWLTKRIAKEDCSPNPDVNVLMSNVYATASRWEEAIRVRSKMTNP 512
Query: 654 GMKRLPGFS 662
+K+ G S
Sbjct: 513 AVKKTAGCS 521
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 122/244 (50%), Gaps = 7/244 (2%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSL---IFKSGLESNTFIQNSLINLYAKCGLISQAKS 79
+ LV+A+ CS ++ G++IHS +F L + N+L+++Y K G + +A
Sbjct: 147 RVTLVTAVTACSRAGDLNLGRRIHSYMDGVFGFSLP----VANALLDMYTKNGYLEEAVK 202
Query: 80 MFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREA 139
MF+ + ++ I++SGY +L+ AR F + K + +TSMI Q+ + EA
Sbjct: 203 MFEQMPERNIISWTILVSGYGIAGQLDKARVFFYQCTQKDLILWTSMINACVQHGSFEEA 262
Query: 140 LEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNM 199
L +FRDM++ V P++ T+ ++++ ++G + + +H + ++ T L+ M
Sbjct: 263 LILFRDMQLQRVEPDKFTVVTLLTCCANIGALDQGEWIHQYAESRNMKIDAVLGTALIEM 322
Query: 200 YCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMI 259
Y C + ++ +F M+ ++ +W ++ G A G A ELFE + G
Sbjct: 323 YSKCGHVDKSLQIFGRMQGKDAAAWTAIICGLATNGQASKALELFEEMQRSKTKPDGITF 382
Query: 260 DGYL 263
G L
Sbjct: 383 IGVL 386
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 98/240 (40%), Gaps = 35/240 (14%)
Query: 16 NLQNSDYELALVSALRYCSAHI-AVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLI 74
LQ + + V L C A+I A+ QG+ IH ++ + + +LI +Y+KCG +
Sbjct: 270 QLQRVEPDKFTVVTLLTCCANIGALDQGEWIHQYAESRNMKIDAVLGTALIEMYSKCGHV 329
Query: 75 SQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQND 134
++ +F D A +T++I G A N
Sbjct: 330 DKSLQIFGRMQGKDAAA-------------------------------WTAIICGLATNG 358
Query: 135 CWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWEC-RMLHGLVIKLMIDGFVIIS 193
+ALE+F +M+ P+ +T V+S+ H G + E R + I+ +
Sbjct: 359 QASKALELFEEMQRSKTKPDGITFIGVLSACCHGGLVDEGQRYFQAMKEVYHIEPRIEHY 418
Query: 194 TNLLNMYCVCSSLVEARSLFDEMKERN--IVSWNVMLNGFAKAGLVELARELFERIPSKD 251
+ L+N+ L EA L +M N + + +L G VE++ L +RI +D
Sbjct: 419 SCLVNLLGHAGLLYEAEKLITDMPVNNDTMPLFGALLTACKANGNVEMSEWLTKRIAKED 478
>gi|357149883|ref|XP_003575265.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Brachypodium distachyon]
Length = 877
Score = 292 bits (747), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 185/642 (28%), Positives = 307/642 (47%), Gaps = 95/642 (14%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E + C+ + G+++H+++ ++G + + F N+L+++Y+K G I A +F
Sbjct: 202 EFGFSCVVNACTGSRDLEAGRKVHAMVIRTGYDKDVFTANALVDMYSKLGDIRMAAVVFG 261
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
D V+ N ISG CV + G Q+ ALE+
Sbjct: 262 KVPETDVVSWNAFISG---------------------CV-----LHGHDQH-----ALEL 290
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
M+ G++PN TL+S++ + G R +HG ++K D I+ L++MY
Sbjct: 291 LLQMKSSGLVPNVFTLSSILKACAGSGAFNLGRQIHGFMVKANADSDNYIAFGLVDMY-- 348
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
AK GL++ A+++F+ IP +D+V W +I G
Sbjct: 349 -----------------------------AKHGLLDDAKKVFDWIPQRDLVLWNALISGC 379
Query: 263 LQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD 322
+ +EAL+++ M +G N + ++ + A + Q+H++ K GF
Sbjct: 380 SHGAQHAEALSLFCRMRKEGFDVNRTTLAAVLKSTASLEAISDTRQVHALAEKLGFLSDS 439
Query: 323 FIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKR 382
+ +I Y C +N A FE ++G
Sbjct: 440 HVVNGLIDSYWKCDCLNYAYRVFE------------------KHG-------------SY 468
Query: 383 DVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAH 442
D+ ++++MI+ +Q + A++LF M+ G+ P+ + S+ A AS ++G+ H
Sbjct: 469 DIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLDPDPFVLSSLLNACASLSAYEQGKQVH 528
Query: 443 EYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGD 502
+++ + A++ YAKCGSI A F + ++ V W+A+I GLA HG
Sbjct: 529 AHLIKRQFMSDVFAGNALVYTYAKCGSIEDADLAFSGLPEK--GVVSWSAMIGGLAQHGH 586
Query: 503 ANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYG 562
L ++ + +I N IT VL C HAGLVD +RYF SMK ++ +E +HY
Sbjct: 587 GKRALDVFHRMVDEHISPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIERTEEHYA 646
Query: 563 CMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPS 622
CM+DLLGRAG+L+DA E++ SMP + + +WG LLAASR+H + E+G AA+ L L+P
Sbjct: 647 CMIDLLGRAGKLDDAMELVNSMPFQTNAAVWGALLAASRVHRDPELGRLAAEKLFILEPE 706
Query: 623 HGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
+ VLL+N YA AG W+D +RK M+D +K+ P S V
Sbjct: 707 KSGTHVLLANTYASAGMWDDVAKVRKLMKDSKVKKEPAMSWV 748
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 126/502 (25%), Positives = 214/502 (42%), Gaps = 102/502 (20%)
Query: 31 RYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPV 90
RY + ++ QG IH+ + KSGL + +N L++ Y+KC L A
Sbjct: 13 RYAATQ-SLLQGAHIHAHLLKSGLFA--VFRNHLLSFYSKCRLPGSA------------- 56
Query: 91 ACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILG 150
R VFD+ P C VS++S++ ++ N R+AL FR MR
Sbjct: 57 ------------------RRVFDEIPDPCHVSWSSLVTAYSNNAMPRDALGAFRSMRSCS 98
Query: 151 VIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEAR 210
V NE L V+ + G + LH L + + G + ++ L+ MY + EAR
Sbjct: 99 VRCNEFVLPVVLKCAPDAGFGTQ---LHALAMATGLGGDIFVANALVAMYGGFGFVDEAR 155
Query: 211 SLFDEMK-ERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLS 269
+FDE ERN VSWN +++ Y++ +R S
Sbjct: 156 MVFDEAGCERNTVSWNGLMS-------------------------------AYVKNDRCS 184
Query: 270 EALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATII 329
A+ ++ M+ G+ PN+ +++AC + G ++H+++++ G+D F ++
Sbjct: 185 HAVKVFGEMVWGGVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGYDKDVFTANALV 244
Query: 330 HFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSA 389
Y+ G I +A + F + + SWNA I+G + +G
Sbjct: 245 DMYSKLGDIRMAAVVFGKVPETDVVSWNAFISGCVLHG---------------------- 282
Query: 390 MISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNS 449
ALEL M +G+ PN T+ S+ A A SG GR H +++ +
Sbjct: 283 ---------HDQHALELLLQMKSSGLVPNVFTLSSILKACAGSGAFNLGRQIHGFMVKAN 333
Query: 450 ITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKI 509
++ ++ ++DMYAK G ++ A +VF I R + WNA+I G + L +
Sbjct: 334 ADSDNYIAFGLVDMYAKHGLLDDAKKVFDWIPQRDLVL--WNALISGCSHGAQHAEALSL 391
Query: 510 YSDLEKRNIKLNSITFIGVLST 531
+ + K +N T VL +
Sbjct: 392 FCRMRKEGFDVNRTTLAAVLKS 413
>gi|356541012|ref|XP_003538978.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g50270-like [Glycine max]
Length = 560
Score = 292 bits (747), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 158/440 (35%), Positives = 237/440 (53%), Gaps = 32/440 (7%)
Query: 225 NVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIA 284
N ++ FA +G VE AR++F+ P +D V+W +I+GY++ + EAL + M +
Sbjct: 146 NALIPAFANSGFVESARQVFDESPFQDTVAWTALINGYVKNDCPGEALKCFVKMRLRDRS 205
Query: 285 PNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQ 344
+ V + ++ A G +H FY GR+ L
Sbjct: 206 VDAVTVASILRAAALVGDADFGRWVHG-------------------FYVEAGRVQLDGYV 246
Query: 345 FELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMAL 404
F +AL+ + + G EDA ++FN + RDV W+ +++GY Q+ + AL
Sbjct: 247 F-----------SALMDMYFKCGHCEDACKVFNELPHRDVVCWTVLVAGYVQSNKFQDAL 295
Query: 405 ELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMY 464
F M+ V PN+ T+ SV A A G L +GR H+Y+ N I +N L A++DMY
Sbjct: 296 RAFWDMLSDNVAPNDFTLSSVLSACAQMGALDQGRLVHQYIECNKINMNVTLGTALVDMY 355
Query: 465 AKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSIT 524
AKCGSI+ A VF ++ +V W II GLA+HGDA L I+ + K I+ N +T
Sbjct: 356 AKCGSIDEALRVFENMP--VKNVYTWTVIINGLAVHGDALGALNIFCCMLKSGIQPNEVT 413
Query: 525 FIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSM 584
F+GVL+ C H G V+ G+R F+ MK Y+++P++ HYGCMVD+LGRAG LEDA+++I +M
Sbjct: 414 FVGVLAACSHGGFVEEGKRLFELMKHAYHLKPEMDHYGCMVDMLGRAGYLEDAKQIIDNM 473
Query: 585 PMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAF 644
PMK + G L A +H E+GE L QP+H S LL+N+Y WE A
Sbjct: 474 PMKPSPGVLGALFGACLVHKAFEMGEHIGNLLVNQQPNHSGSYALLANLYKMCQNWEAAA 533
Query: 645 SIRKEMRDCGMKRLPGFSGV 664
+RK M+ + + PG+S +
Sbjct: 534 QVRKLMKGLRVVKAPGYSRI 553
Score = 161 bits (408), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 110/437 (25%), Positives = 204/437 (46%), Gaps = 101/437 (23%)
Query: 45 IHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDR 104
I++ IFK G + + FI N+LI +A G +
Sbjct: 129 IYAQIFKLGFDLDLFIGNALIPAFANSGFVE----------------------------- 159
Query: 105 LNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISS 164
AR+VFD++P + V++T++I G+ +NDC EAL+ F MR+ + VT+AS++ +
Sbjct: 160 --SARQVFDESPFQDTVAWTALINGYVKNDCPGEALKCFVKMRLRDRSVDAVTVASILRA 217
Query: 165 SVHLGGIWECRMLHGLVI---KLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNI 221
+ +G R +HG + ++ +DG+V + L++MY C +A +F+E+ R++
Sbjct: 218 AALVGDADFGRWVHGFYVEAGRVQLDGYVF--SALMDMYFKCGHCEDACKVFNELPHRDV 275
Query: 222 VSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCD 281
V W V ++ GY+Q + +AL + ML D
Sbjct: 276 VCWTV-------------------------------LVAGYVQSNKFQDALRAFWDMLSD 304
Query: 282 GIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLA 341
+APND + ++SAC + A +G ++H Y C +IN+
Sbjct: 305 NVAPNDFTLSSVLSACAQMGALDQG--------------------RLVHQYIECNKINM- 343
Query: 342 RLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPN 401
++ AL+ + + G I++A ++F NM ++VY+W+ +I+G A +
Sbjct: 344 ----------NVTLGTALVDMYAKCGSIDEALRVFENMPVKNVYTWTVIINGLAVHGDAL 393
Query: 402 MALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLS--AA 459
AL +F M+ +G++PNE+T V V A + G ++EG+ E ++ ++ L +
Sbjct: 394 GALNIFCCMLKSGIQPNEVTFVGVLAACSHGGFVEEGKRLFE-LMKHAYHLKPEMDHYGC 452
Query: 460 IIDMYAKCGSINTAFEV 476
++DM + G + A ++
Sbjct: 453 MVDMLGRAGYLEDAKQI 469
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/265 (30%), Positives = 128/265 (48%), Gaps = 11/265 (4%)
Query: 345 FELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMAL 404
F+LG + NALI F +G +E ARQ+F+ +D +W+A+I+GY +N+ P AL
Sbjct: 134 FKLGFDLDLFIGNALIPAFANSGFVESARQVFDESPFQDTVAWTALINGYVKNDCPGEAL 193
Query: 405 ELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHE-YVLNNSITLNDNLSAAIIDM 463
+ F M + +T+ S+ A A G GRW H YV + L+ + +A++DM
Sbjct: 194 KCFVKMRLRDRSVDAVTVASILRAAALVGDADFGRWVHGFYVEAGRVQLDGYVFSALMDM 253
Query: 464 YAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSI 523
Y KCG A +VF + R V W ++ G L+ + D+ N+ N
Sbjct: 254 YFKCGHCEDACKVFNELPHR--DVVCWTVLVAGYVQSNKFQDALRAFWDMLSDNVAPNDF 311
Query: 524 TFIGVLSTCCHAGLVDLG---ERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEV 580
T VLS C G +D G +Y + K NV +VD+ + G +++A V
Sbjct: 312 TLSSVLSACAQMGALDQGRLVHQYIECNKINMNVTLGTA----LVDMYAKCGSIDEALRV 367
Query: 581 IRSMPMKADVVIWGTLLAASRIHGN 605
+MP+K +V W ++ +HG+
Sbjct: 368 FENMPVK-NVYTWTVIINGLAVHGD 391
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 77/342 (22%), Positives = 146/342 (42%), Gaps = 93/342 (27%)
Query: 42 GQQIHSLIFKSG-LESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYI 100
G+ +H ++G ++ + ++ ++L+++Y KCG A +F+ D V ++++GY+
Sbjct: 227 GRWVHGFYVEAGRVQLDGYVFSALMDMYFKCGHCEDACKVFNELPHRDVVCWTVLVAGYV 286
Query: 101 RNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLAS 160
++++ D AL F DM V PN+ TL+S
Sbjct: 287 QSNKFQD-------------------------------ALRAFWDMLSDNVAPNDFTLSS 315
Query: 161 VISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERN 220
V+S+ +G + + R++H + I+ V + T L++MY C S+ EA +F+ M +N
Sbjct: 316 VLSACAQMGALDQGRLVHQYIECNKINMNVTLGTALVDMYAKCGSIDEALRVFENMPVKN 375
Query: 221 IVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLC 280
+ +W V++NG A G D + AL ++ ML
Sbjct: 376 VYTWTVIINGLAVHG---------------DALG----------------ALNIFCCMLK 404
Query: 281 DGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINL 340
GI PN+V V +++AC H V+ G ++ ++ H Y
Sbjct: 405 SGIQPNEVTFVGVLAACS-----------HGGFVEEGKRLFELMK----HAYH------- 442
Query: 341 ARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKR 382
+K + + ++ R G +EDA+Q+ +NM +
Sbjct: 443 --------LKPEMDHYGCMVDMLGRAGYLEDAKQIIDNMPMK 476
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 105/249 (42%), Gaps = 45/249 (18%)
Query: 4 DHFHSVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNS 63
D + ++ N+ +D+ L+ S L C+ A+ QG+ +H I + + N + +
Sbjct: 293 DALRAFWDMLSDNVAPNDFTLS--SVLSACAQMGALDQGRLVHQYIECNKINMNVTLGTA 350
Query: 64 LINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSY 123
L+++YAKCG I ++A VF+ P+K ++
Sbjct: 351 LVDMYAKCGSI-------------------------------DEALRVFENMPVKNVYTW 379
Query: 124 TSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECR-----MLH 178
T +I G A + AL +F M G+ PNEVT V+++ H G + E + M H
Sbjct: 380 TVIINGLAVHGDALGALNIFCCMLKSGIQPNEVTFVGVLAACSHGGFVEEGKRLFELMKH 439
Query: 179 GLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVE 238
+K +D + +++M L +A+ + D M + +L A LV
Sbjct: 440 AYHLKPEMDHYGC----MVDMLGRAGYLEDAKQIIDNMPMKPSPG---VLGALFGACLVH 492
Query: 239 LARELFERI 247
A E+ E I
Sbjct: 493 KAFEMGEHI 501
>gi|357507741|ref|XP_003624159.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87162577|gb|ABD28372.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355499174|gb|AES80377.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 755
Score = 292 bits (747), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 171/577 (29%), Positives = 307/577 (53%), Gaps = 22/577 (3%)
Query: 91 ACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWRE-ALEVFRDMRIL 149
+ N +++ Y+++ L+ A ++FD+ K ++T +I GFA+ E +FR+M+
Sbjct: 69 SANYLLTLYVKSSNLDHAHKLFDEITHKNTQTWTILISGFARAAGSSELVFSLFREMQAD 128
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
G PN+ TL+SV+ I + +H +++ + G V++ ++L++Y C A
Sbjct: 129 GACPNQYTLSSVLKCCSRENNIQFGKGIHAWILRNGVGGDVVLENSILDLYLKCKEFEYA 188
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQ--VER 267
S F+ M E+++VSWN+M+ + + G VE + E+F P+KDVVSW T+IDG +Q ER
Sbjct: 189 ESFFELMIEKDVVSWNIMIGAYLREGDVEKSLEMFRNFPNKDVVSWNTIIDGLIQCGYER 248
Query: 268 LSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQAT 327
L AL M+ G + V + G Q+H ++ G + +I+++
Sbjct: 249 L--ALEQLYCMVAHGTEFSPVTFSIALILVSSLSLVEVGRQLHGRVLTFGLNSDGYIRSS 306
Query: 328 IIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSW 387
++ Y CGR++ A +KD + F+R G + K + SW
Sbjct: 307 LVEMYGKCGRMDKASTI----LKD-------VPLNFLRKGNF----GVTCKEPKARMVSW 351
Query: 388 SAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLN 447
S+M+SGY N + ++ F MV + + T+ ++ A A++G L+ G+ H Y+
Sbjct: 352 SSMVSGYVWNGKYEDGMKTFRSMVCELIVVDIRTVATIISACANAGILEFGKQIHAYIQK 411
Query: 448 NSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTL 507
+ ++ + +++IDMY+K GS++ A +F I++ +V W ++I G A+HG +
Sbjct: 412 IGLRIDAYVGSSLIDMYSKSGSLDDALMIFEQIKE--PNVVLWTSMISGCALHGQGKEAI 469
Query: 508 KIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDL 567
++ + I N +TF+GVL+ C H GL++ G RYF+ MK Y++ P+++HY MV+L
Sbjct: 470 SLFEGMLNLGIIPNEVTFVGVLNACSHVGLIEEGCRYFRMMKDTYHINPEVEHYTSMVNL 529
Query: 568 LGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSR 627
GRAG L +A+ I + +W + L++ R+H N +G+ ++ L PS +
Sbjct: 530 YGRAGHLIEAKNFIFENSISHFTSVWRSFLSSCRLHKNFNMGKSVSEMLLQSAPSDPDAY 589
Query: 628 VLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
+LLSN+ + +W++A +R M G+K+ PG S V
Sbjct: 590 ILLSNMCSSNHQWDEAAIVRSLMYQRGVKKQPGQSWV 626
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 125/489 (25%), Positives = 227/489 (46%), Gaps = 58/489 (11%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
+ L S L+ CS + G+ IH+ I ++G+ + ++NS+++LY KC A+S F+
Sbjct: 134 QYTLSSVLKCCSRENNIQFGKGIHAWILRNGVGGDVVLENSILDLYLKCKEFEYAESFFE 193
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
D V+ NIMI Y+R + + E+F P K VS+ ++I G Q R ALE
Sbjct: 194 LMIEKDVVSWNIMIGAYLREGDVEKSLEMFRNFPNKDVVSWNTIIDGLIQCGYERLALEQ 253
Query: 143 FRDMRILGV--IPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMY 200
M G P ++A ++ SS+ L + R LHG V+ ++ I ++L+ MY
Sbjct: 254 LYCMVAHGTEFSPVTFSIALILVSSLSLVEV--GRQLHGRVLTFGLNSDGYIRSSLVEMY 311
Query: 201 CVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMID 260
C + +A ++ + V LN K +E P +VSW +M+
Sbjct: 312 GKCGRMDKASTILKD----------VPLNFLRKGNFGVTCKE-----PKARMVSWSSMVS 356
Query: 261 GYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDC 320
GY+ + + + +R+M+C+ I + + +ISAC A G QIH+ I K G
Sbjct: 357 GYVWNGKYEDGMKTFRSMVCELIVVDIRTVATIISACANAGILEFGKQIHAYIQKIGLRI 416
Query: 321 YDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ 380
++ +++I Y+ G ++ A + FE + ++ W ++I+G +G
Sbjct: 417 DAYVGSSLIDMYSKSGSLDDALMIFEQIKEPNVVLWTSMISGCALHG------------- 463
Query: 381 KRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG-R 439
Q A+ LF GM++ G+ PNE+T V V A + G ++EG R
Sbjct: 464 ------------------QGKEAISLFEGMLNLGIIPNEVTFVGVLNACSHVGLIEEGCR 505
Query: 440 WAHEYVLNNSITLNDNLS--AAIIDMYAKCGSINTAFE-VFYHIRDRTTSVSPWNAIICG 496
+ ++ ++ +N + +++++Y + G + A +F + TSV W + +
Sbjct: 506 YFR--MMKDTYHINPEVEHYTSMVNLYGRAGHLIEAKNFIFENSISHFTSV--WRSFLSS 561
Query: 497 LAMHGDANL 505
+H + N+
Sbjct: 562 CRLHKNFNM 570
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/319 (20%), Positives = 135/319 (42%), Gaps = 50/319 (15%)
Query: 345 FELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNE-QPNMA 403
F+ G + S N L+ ++++ ++ A +LF+ + ++ +W+ +ISG+A+ +
Sbjct: 59 FKKGSLQILNSANYLLTLYVKSSNLDHAHKLFDEITHKNTQTWTILISGFARAAGSSELV 118
Query: 404 LELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDM 463
LF M G PN+ T+ SV + ++ G+ H ++L N + + L +I+D+
Sbjct: 119 FSLFREMQADGACPNQYTLSSVLKCCSRENNIQFGKGIHAWILRNGVGGDVVLENSILDL 178
Query: 464 YAKC-------------------------------GSINTAFEVFYHIRDRTTSVSPWNA 492
Y KC G + + E+F + ++ V WN
Sbjct: 179 YLKCKEFEYAESFFELMIEKDVVSWNIMIGAYLREGDVEKSLEMFRNFPNK--DVVSWNT 236
Query: 493 IICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVY 552
II GL G L L+ + + + +TF L LV++G R +
Sbjct: 237 IIDGLIQCGYERLALEQLYCMVAHGTEFSPVTFSIALILVSSLSLVEVG-RQLHGRVLTF 295
Query: 553 NVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPM---------------KADVVIWGTLL 597
+ D +V++ G+ G+++ A +++ +P+ KA +V W +++
Sbjct: 296 GLNSDGYIRSSLVEMYGKCGRMDKASTILKDVPLNFLRKGNFGVTCKEPKARMVSWSSMV 355
Query: 598 AASRIHGNVEVGERAAKSL 616
+ +G E G + +S+
Sbjct: 356 SGYVWNGKYEDGMKTFRSM 374
>gi|347954504|gb|AEP33752.1| chloroplast biogenesis 19, partial [Lobularia maritima]
Length = 496
Score = 292 bits (747), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 154/424 (36%), Positives = 245/424 (57%), Gaps = 6/424 (1%)
Query: 245 ERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFG 304
+++ +SW + I + RL+EA + M G+ PN + + L+S CG +
Sbjct: 25 QKLNLSTTISWTSRITLLSRNGRLAEAAKEFSDMRFAGVEPNHITFIALLSGCGDFSSGS 84
Query: 305 E--GLQIHSIIVKAGFD-CYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIA 361
E G +H K G D + + II Y+ GR++ ARL F+ + +WN +I
Sbjct: 85 ESFGDLLHGYACKLGLDRNHVMVGTAIIGMYSKHGRVSKARLVFDHMEGKNSMTWNTMID 144
Query: 362 GFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEIT 421
G++R G I+DA +LF+ M +R + SW+AMI+G+ + AL F M +GV+P+ +
Sbjct: 145 GYMRKGKIDDAYKLFDEMPERGLISWTAMINGFVKKGFHEEALVWFREMQSSGVEPDYVA 204
Query: 422 MVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIR 481
+++V A + G L G W H Y+++ N ++ + ID++ +CG + A VF H+
Sbjct: 205 IIAVLAACTNLGALSFGLWVHRYLVSRDFRNNVRVNNSSIDLHCRCGCVELAQPVFDHME 264
Query: 482 DRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLG 541
RT V WN++I + +G A+ +L + +++ K N++TF G L+ C H GLV+ G
Sbjct: 265 KRT--VVSWNSVIVVFSANGHADESLVYFRRMQEEGFKPNAVTFTGALTACSHVGLVEEG 322
Query: 542 ERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASR 601
RYF++MK Y + P ++HYGC+VDL RAG+LEDA V++SMPMK + V+ G+LLAA R
Sbjct: 323 LRYFQTMKKEYRISPRIEHYGCLVDLYSRAGRLEDALNVVQSMPMKPNEVVIGSLLAACR 382
Query: 602 IHGNVEV-GERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPG 660
HGN V ER K L+ + V+LSN+YA G+WE A +R++M+ G+K+ PG
Sbjct: 383 THGNNTVLAERLMKHLSDTNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPG 442
Query: 661 FSGV 664
FS +
Sbjct: 443 FSSI 446
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 111/427 (25%), Positives = 196/427 (45%), Gaps = 40/427 (9%)
Query: 101 RNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLAS 160
RND+ N + K + +S+TS I ++N EA + F DMR GV PN +T +
Sbjct: 16 RNDQTNAKTQ---KLNLSTTISWTSRITLLSRNGRLAEAAKEFSDMRFAGVEPNHITFIA 72
Query: 161 VISSSVHLGGIWEC--RMLHGLVIKLMID-GFVIISTNLLNMYCVCSSLVEARSLFDEMK 217
++S E +LHG KL +D V++ T ++ MY + +AR +FD M+
Sbjct: 73 LLSGCGDFSSGSESFGDLLHGYACKLGLDRNHVMVGTAIIGMYSKHGRVSKARLVFDHME 132
Query: 218 ERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRA 277
+N ++WN M++G+ + G ++ A +LF+ +P + ++SW MI+G+++ EAL +R
Sbjct: 133 GKNSMTWNTMIDGYMRKGKIDDAYKLFDEMPERGLISWTAMINGFVKKGFHEEALVWFRE 192
Query: 278 MLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGR 337
M G+ P+ V I+ +++AC A GL +H +V F + + I + CG
Sbjct: 193 MQSSGVEPDYVAIIAVLAACTNLGALSFGLWVHRYLVSRDFRNNVRVNNSSIDLHCRCGC 252
Query: 338 INLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQN 397
+ LA+ F+ K + SWN++I F NG +++ F MQ
Sbjct: 253 VELAQPVFDHMEKRTVVSWNSVIVVFSANGHADESLVYFRRMQ----------------- 295
Query: 398 EQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG-RWAHEYVLNNSITLNDNL 456
+ G KPN +T A + G ++EG R+ I+
Sbjct: 296 --------------EEGFKPNAVTFTGALTACSHVGLVEEGLRYFQTMKKEYRISPRIEH 341
Query: 457 SAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDAN-LTLKIYSDLEK 515
++D+Y++ G + A V + + V +++ HG+ L ++ L
Sbjct: 342 YGCLVDLYSRAGRLEDALNVVQSMPMKPNEVVI-GSLLAACRTHGNNTVLAERLMKHLSD 400
Query: 516 RNIKLNS 522
N+K +S
Sbjct: 401 TNVKSHS 407
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 158/319 (49%), Gaps = 55/319 (17%)
Query: 40 SQGQQIHSLIFKSGLESN-TFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISG 98
S G +H K GL+ N + ++I +Y+K G +S+A+ +FD + + N MI G
Sbjct: 86 SFGDLLHGYACKLGLDRNHVMVGTAIIGMYSKHGRVSKARLVFDHMEGKNSMTWNTMIDG 145
Query: 99 YIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTL 158
Y+R +++DA ++FD+ P + +S+T+MI GF + EAL FR+M+ GV P+ V +
Sbjct: 146 YMRKGKIDDAYKLFDEMPERGLISWTAMINGFVKKGFHEEALVWFREMQSSGVEPDYVAI 205
Query: 159 ASVISSSVHLG----GIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFD 214
+V+++ +LG G+W +H ++ V ++ + ++++C C + A+ +FD
Sbjct: 206 IAVLAACTNLGALSFGLW----VHRYLVSRDFRNNVRVNNSSIDLHCRCGCVELAQPVFD 261
Query: 215 EMKERNIVSWNVML-----NGFA------------------------------KAGLVEL 239
M++R +VSWN ++ NG A GLVE
Sbjct: 262 HMEKRTVVSWNSVIVVFSANGHADESLVYFRRMQEEGFKPNAVTFTGALTACSHVGLVEE 321
Query: 240 ARELFERIPSKDVVS-----WGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLI 294
F+ + + +S +G ++D Y + RL +AL + ++M + PN+V+I L+
Sbjct: 322 GLRYFQTMKKEYRISPRIEHYGCLVDLYSRAGRLEDALNVVQSM---PMKPNEVVIGSLL 378
Query: 295 SAC---GRAMAFGEGLQIH 310
+AC G E L H
Sbjct: 379 AACRTHGNNTVLAERLMKH 397
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 70/164 (42%), Gaps = 32/164 (19%)
Query: 10 FNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYA 69
F +++ DY +A+++ L C+ A+S G +H + +N + NS I+L+
Sbjct: 190 FREMQSSGVEPDY-VAIIAVLAACTNLGALSFGLWVHRYLVSRDFRNNVRVNNSSIDLHC 248
Query: 70 KCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMG 129
+CG + A+ VFD + VS+ S+I+
Sbjct: 249 RCGCVELAQP-------------------------------VFDHMEKRTVVSWNSVIVV 277
Query: 130 FAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWE 173
F+ N E+L FR M+ G PN VT +++ H+G + E
Sbjct: 278 FSANGHADESLVYFRRMQEEGFKPNAVTFTGALTACSHVGLVEE 321
>gi|356545826|ref|XP_003541335.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 607
Score = 292 bits (747), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 156/436 (35%), Positives = 245/436 (56%), Gaps = 9/436 (2%)
Query: 231 FAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERL-SEALTMYRAMLCDGIAPNDVM 289
+K G + A +LF +P+ D + T+ + + + S +L Y ML + PN
Sbjct: 46 LSKHGDINYALKLFTTLPNPDTFLYNTLFKAFFSLSQTPSLSLLFYSHMLQHCVTPNAFT 105
Query: 290 IVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGI 349
LI AC E Q+H+ ++K GF + +IH Y A G ++ AR F
Sbjct: 106 FPSLIRACKLE---EEAKQLHAHVLKFGFGGDTYALNNLIHVYFAFGSLDDARRVFCTMS 162
Query: 350 KDHIASWNALIAGFIRNGMIEDARQLFNNMQ-KRDVYSWSAMISGYAQNEQPNMALELFH 408
++ SW +L++G+ + G++++A ++F M K++ SW+AMI+ + + + A LF
Sbjct: 163 DPNVVSWTSLVSGYSQWGLVDEAFRVFELMPCKKNSVSWNAMIACFVKGNRFREAFALFR 222
Query: 409 GM-VDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKC 467
M V+ ++ + ++ A G L++G W H+YV I L+ L+ IIDMY KC
Sbjct: 223 RMRVEKKMELDRFVAATMLSACTGVGALEQGMWIHKYVEKTGIVLDSKLATTIIDMYCKC 282
Query: 468 GSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRN-IKLNSITFI 526
G ++ AF VF ++ VS WN +I G AMHG ++++ ++E+ + +SITF+
Sbjct: 283 GCLDKAFHVFCGLK--VKRVSSWNCMIGGFAMHGKGEDAIRLFKEMEEEAMVAPDSITFV 340
Query: 527 GVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPM 586
VL+ C H+GLV+ G YF+ M V+ ++P +HYGCMVDLL RAG+LE+A++VI MPM
Sbjct: 341 NVLTACAHSGLVEEGWYYFRYMVDVHGIDPTKEHYGCMVDLLARAGRLEEAKKVIDEMPM 400
Query: 587 KADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSI 646
D + G LL A RIHGN+E+GE + L P + V+L N+YA G+WE +
Sbjct: 401 SPDAAVLGALLGACRIHGNLELGEEVGNRVIELDPENSGRYVILGNMYASCGKWEQVAGV 460
Query: 647 RKEMRDCGMKRLPGFS 662
RK M D G+K+ PGFS
Sbjct: 461 RKLMDDRGVKKEPGFS 476
Score = 140 bits (353), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 116/445 (26%), Positives = 196/445 (44%), Gaps = 70/445 (15%)
Query: 38 AVSQGQQIHSLIFKSGLESNTFIQNSLINL--YAKCGLISQAKSMFDSCSTLDPVACNIM 95
++++ +Q HSL+ + GL +N + + +K G I+ A +F + D N +
Sbjct: 14 SMAEVKQQHSLLLRLGLSTNNHAMSRIFTFCSLSKHGDINYALKLFTTLPNPDTFLYNTL 73
Query: 96 ISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNE 155
+ +TP + Y+ M+ C V PN
Sbjct: 74 FKAFFS----------LSQTPSLSLLFYSHML-----QHC---------------VTPNA 103
Query: 156 VTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDE 215
T S+I + E + LH V+K G NL+++Y SL +AR +F
Sbjct: 104 FTFPSLIRACKLEE---EAKQLHAHVLKFGFGGDTYALNNLIHVYFAFGSLDDARRVFCT 160
Query: 216 MKERNIVSWNVMLNGFAKAGLVELARELFERIP-SKDVVSWGTMIDGYLQVERLSEALTM 274
M + N+VSW +++G+++ GLV+ A +FE +P K+ VSW MI +++ R EA +
Sbjct: 161 MSDPNVVSWTSLVSGYSQWGLVDEAFRVFELMPCKKNSVSWNAMIACFVKGNRFREAFAL 220
Query: 275 YRAMLCDGIAPNDVMI-VDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYA 333
+R M + D + ++SAC A +G+ IH + K G + TII Y
Sbjct: 221 FRRMRVEKKMELDRFVAATMLSACTGVGALEQGMWIHKYVEKTGIVLDSKLATTIIDMYC 280
Query: 334 ACGRINLARLQFELGIK-DHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMIS 392
CG ++ A F G+K ++SWN +I GF +G EDA +LF M++
Sbjct: 281 KCGCLDKAFHVF-CGLKVKRVSSWNCMIGGFAMHGKGEDAIRLFKEMEE----------- 328
Query: 393 GYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLN-NSIT 451
+A V P+ IT V+V A A SG ++EG + Y+++ + I
Sbjct: 329 -------------------EAMVAPDSITFVNVLTACAHSGLVEEGWYYFRYMVDVHGID 369
Query: 452 LNDNLSAAIIDMYAKCGSINTAFEV 476
++D+ A+ G + A +V
Sbjct: 370 PTKEHYGCMVDLLARAGRLEEAKKV 394
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 98/239 (41%), Gaps = 42/239 (17%)
Query: 28 SALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTL 87
+ L C+ A+ QG IH + K+G+ ++ + ++I++Y KCG
Sbjct: 239 TMLSACTGVGALEQGMWIHKYVEKTGIVLDSKLATTIIDMYCKCGC-------------- 284
Query: 88 DPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMR 147
L+ A VF +K S+ MI GFA + +A+ +F++M
Sbjct: 285 -----------------LDKAFHVFCGLKVKRVSSWNCMIGGFAMHGKGEDAIRLFKEME 327
Query: 148 ILGVI-PNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTN-----LLNMYC 201
++ P+ +T +V+++ H G + E + M+D I T ++++
Sbjct: 328 EEAMVAPDSITFVNVLTACAHSGLVEE----GWYYFRYMVDVHGIDPTKEHYGCMVDLLA 383
Query: 202 VCSSLVEARSLFDEMK-ERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMI 259
L EA+ + DEM + +L G +EL E+ R+ D + G +
Sbjct: 384 RAGRLEEAKKVIDEMPMSPDAAVLGALLGACRIHGNLELGEEVGNRVIELDPENSGRYV 442
>gi|334185563|ref|NP_188975.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274454|sp|Q9LW63.1|PP251_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g23330
gi|11994318|dbj|BAB02277.1| unnamed protein product [Arabidopsis thaliana]
gi|332643232|gb|AEE76753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 715
Score = 292 bits (747), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 184/619 (29%), Positives = 308/619 (49%), Gaps = 45/619 (7%)
Query: 54 LESNTFIQNSLINLYAKCGLISQAKSM---FDSCSTLDPVACNIMISGYIRNDRLNDARE 110
+ S+ + +LI + SQAK + F +L + +I+IS Y L++A
Sbjct: 1 MSSSKALIKTLIKNPTRIKSKSQAKQLHAQFIRTQSLSHTSASIVISIYTNLKLLHEALL 60
Query: 111 VFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGG 170
+F +++ S+I F + +AL F +MR G P+ SV+ S +
Sbjct: 61 LFKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMD 120
Query: 171 IWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC---SSLVEARSLFDEMKER--NIVSWN 225
+ +HG +++L +D + L+NMY S + ++FDEM +R N +
Sbjct: 121 LRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDED 180
Query: 226 VMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAP 285
V ++ R +FE +P KDVVS+ T+I GY Q +AL M R M + P
Sbjct: 181 VKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKP 240
Query: 286 NDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQF 345
+ + ++ + +G +IH +++ G D +I ++++ YA RI
Sbjct: 241 DSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARI------- 293
Query: 346 ELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALE 405
ED+ ++F+ + RD SW+++++GY QN + N AL
Sbjct: 294 ------------------------EDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALR 329
Query: 406 LFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYA 465
LF MV A VKP + SV A A TL G+ H YVL N +++A++DMY+
Sbjct: 330 LFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYS 389
Query: 466 KCGSINTAFEVFYHIRDRTTSVS--PWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSI 523
KCG+I A ++F DR + W AII G A+HG + + ++ +++++ +K N +
Sbjct: 390 KCGNIKAARKIF----DRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQV 445
Query: 524 TFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRS 583
F+ VL+ C H GLVD YF SM VY + +L+HY + DLLGRAG+LE+A I
Sbjct: 446 AFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISK 505
Query: 584 MPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDA 643
M ++ +W TLL++ +H N+E+ E+ A+ + + + + VL+ N+YA GRW++
Sbjct: 506 MCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEM 565
Query: 644 FSIRKEMRDCGMKRLPGFS 662
+R MR G+++ P S
Sbjct: 566 AKLRLRMRKKGLRKKPACS 584
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 120/490 (24%), Positives = 220/490 (44%), Gaps = 73/490 (14%)
Query: 28 SALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAK-CGLISQ--AKSMFDSC 84
S L+ C+ + + G+ +H I + G++ + + N+L+N+YAK G+ S+ ++FD
Sbjct: 110 SVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEM 169
Query: 85 S--TLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
T + ++ I ++ R VF+ P K VSY ++I G+AQ+ + +AL +
Sbjct: 170 PQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRM 229
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
R+M + P+ TL+SV+ + + + +HG VI+ ID V I ++L++MY
Sbjct: 230 VREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAK 289
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
+ + ++ +F + R+ +SWN ++ G Y
Sbjct: 290 SARIEDSERVFSRLYCRDGISWNSLVAG-------------------------------Y 318
Query: 263 LQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD 322
+Q R +EAL ++R M+ + P V +I AC G Q+H +++ GF
Sbjct: 319 VQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNI 378
Query: 323 FIQATIIHFYAACGRINLARLQFE-LGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQK 381
FI + ++ Y+ CG I AR F+ + + D + SW A+I G +G +A LF M++
Sbjct: 379 FIASALVDMYSKCGNIKAARKIFDRMNVLDEV-SWTAIIMGHALHGHGHEAVSLFEEMKR 437
Query: 382 RDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWA 441
+ GVKPN++ V+V A + G + E W
Sbjct: 438 Q-------------------------------GVKPNQVAFVAVLTACSHVGLVDEA-WG 465
Query: 442 HEYVLNNSITLNDNLS--AAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAM 499
+ + LN L AA+ D+ + G + A+ + T S W+ ++ ++
Sbjct: 466 YFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTG-SVWSTLLSSCSV 524
Query: 500 HGDANLTLKI 509
H + L K+
Sbjct: 525 HKNLELAEKV 534
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 122/274 (44%), Gaps = 62/274 (22%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
L S L S ++ V +G++IH + + G++S+ +I +SL+++YAK I ++ +F
Sbjct: 243 FTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSR 302
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
D ++ N +++GY++N R N EAL +F
Sbjct: 303 LYCRDGISWNSLVAGYVQNGRYN-------------------------------EALRLF 331
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
R M V P V +SVI + HL + + LHG V++ + I++ L++MY C
Sbjct: 332 RQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKC 391
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYL 263
++ AR +FD M + VSW ++ G A G G+
Sbjct: 392 GNIKAARKIFDRMNVLDEVSWTAIIMGHALHG------------------------HGH- 426
Query: 264 QVERLSEALTMYRAMLCDGIAPNDVMIVDLISAC 297
EA++++ M G+ PN V V +++AC
Sbjct: 427 ------EAVSLFEEMKRQGVKPNQVAFVAVLTAC 454
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 74/150 (49%), Gaps = 31/150 (20%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+A S + C+ + G+Q+H + + G SN FI ++L+++Y+KCG I A+ +FD
Sbjct: 344 VAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDR 403
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
+ LD VS+T++IMG A + EA+ +F
Sbjct: 404 MNVLDE-------------------------------VSWTAIIMGHALHGHGHEAVSLF 432
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWE 173
+M+ GV PN+V +V+++ H+G + E
Sbjct: 433 EEMKRQGVKPNQVAFVAVLTACSHVGLVDE 462
>gi|359481919|ref|XP_003632692.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Vitis vinifera]
Length = 1053
Score = 292 bits (747), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 169/528 (32%), Positives = 276/528 (52%), Gaps = 66/528 (12%)
Query: 137 REALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNL 196
R+ E +M I G+ SV++ + I E + +H +IK + V + T L
Sbjct: 459 RQLKEALLEMGIQGLEVEFQGYDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRL 518
Query: 197 LNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWG 256
+ +Y C L +AR + DEM P ++VVSW
Sbjct: 519 IVLYNKCRCLGDARRVLDEM-------------------------------PERNVVSWT 547
Query: 257 TMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKA 316
MI GY Q SEAL ++ ML G APN+ ++++C + F G QIHS+++K
Sbjct: 548 AMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIKT 607
Query: 317 GFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLF 376
F+ + F+ ++++ YA G+I +AR++F
Sbjct: 608 SFESHIFVGSSLLDMYAKAGKIC-------------------------------EARRVF 636
Query: 377 NNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLK 436
+ + +RDV S +A+ISGYAQ AL+LF + G++ N +T SV A++ L
Sbjct: 637 DGLPERDVVSCTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALD 696
Query: 437 EGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICG 496
GR H +VL + L ++IDMY+KCGS+ + +F + +RT V WNA++ G
Sbjct: 697 HGRQVHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERT--VISWNAMLVG 754
Query: 497 LAMHGDANLTLKIYSDLEKRN-IKLNSITFIGVLSTCCHAGLVDLG-ERYFKSMKSVYNV 554
+ HG ++++ +++ N +K +S+TF+ VLS C H G+ D G E +++ +
Sbjct: 755 YSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGF 814
Query: 555 EPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAK 614
EP+++HYGC+VDL GRAG++E+A E I+ MP + IWG+LL A R+H NV +GE A+
Sbjct: 815 EPEIEHYGCVVDLFGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHQNVHIGEFVAR 874
Query: 615 SLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
L ++ + + V+LSN+YA AGRW+D ++R+ M++ + + PG S
Sbjct: 875 RLLEIESENAGNYVILSNLYASAGRWDDVRTVRELMKEKAVIKEPGRS 922
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 112/397 (28%), Positives = 192/397 (48%), Gaps = 69/397 (17%)
Query: 28 SALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTL 87
S L C + A+ +GQ++H+ + K+ E +++ LI LY KC C
Sbjct: 482 SVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKC-----------RC--- 527
Query: 88 DPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMR 147
L DAR V D+ P + VS+T+MI G++Q EAL +F +M
Sbjct: 528 -----------------LGDARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEML 570
Query: 148 ILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLV 207
+ G PNE T A+V++S G R +H LVIK + + + ++LL+MY +
Sbjct: 571 MSGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKIC 630
Query: 208 EARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVER 267
EAR +FD + ER++VS +++G+A+ GL E
Sbjct: 631 EARRVFDGLPERDVVSCTAIISGYAQLGLDE----------------------------- 661
Query: 268 LSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQAT 327
EAL ++R + +G+ N V +++A A G Q+HS +++A Y +Q +
Sbjct: 662 --EALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNS 719
Query: 328 IIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ-----KR 382
+I Y+ CG + +R F+ + + SWNA++ G+ ++G+ +A +LF M+ K
Sbjct: 720 LIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKP 779
Query: 383 DVYSWSAMISGYAQNEQPNMALELFHGMVDA--GVKP 417
D ++ A++SG + + LE+F+ MV+ G +P
Sbjct: 780 DSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEP 816
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 94/343 (27%), Positives = 157/343 (45%), Gaps = 66/343 (19%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E + L C++ G+QIHSL+ K+ ES+ F+ +SL+++YAK G I +A
Sbjct: 578 EFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEA----- 632
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
R VFD P + VS T++I G+AQ EAL++
Sbjct: 633 --------------------------RRVFDGLPERDVVSCTAIISGYAQLGLDEEALDL 666
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
FR ++ G+ N VT ASV+++ L + R +H V++ + +V++ +L++MY
Sbjct: 667 FRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLIDMYSK 726
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
C SL +R +FD M ER ++SWN ML G++K GL A ELF+ + ++ V
Sbjct: 727 CGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVK-------- 778
Query: 263 LQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIV--KAGFDC 320
P+ V + ++S C GL+I +V K GF+
Sbjct: 779 ----------------------PDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEP 816
Query: 321 YDFIQATIIHFYAACGRINLARLQF--ELGIKDHIASWNALIA 361
++ + GR+ A +F ++ + A W +L+
Sbjct: 817 EIEHYGCVVDLFGRAGRVEEA-FEFIKKMPFEPTAAIWGSLLG 858
>gi|356498282|ref|XP_003517982.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Glycine max]
Length = 609
Score = 292 bits (747), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 160/478 (33%), Positives = 258/478 (53%), Gaps = 39/478 (8%)
Query: 193 STNLLNMYCVCSSLVEARSL--FDEMKERNIVSWNVMLNGFAKAGL----VELARELFER 246
S+++L++ C+SL E + + + +N + L F + ++ A +F++
Sbjct: 35 SSSILSLIPKCTSLRELKQIQAYTIKTHQNNPTVLTKLINFCTSNPTIASMDHAHRMFDK 94
Query: 247 IPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEG 306
IP D+V + TM GY + + A+ + +LC G+ P+D L+ AC R A EG
Sbjct: 95 IPQPDIVLFNTMARGYARFDDPLRAILLCSQVLCSGLLPDDYTFSSLLKACARLKALEEG 154
Query: 307 LQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRN 366
Q+H + VK G ++ T+I+ Y AC ++ A
Sbjct: 155 KQLHCLAVKLGVGDNMYVCPTLINMYTACNDVDAA------------------------- 189
Query: 367 GMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVF 426
R++F+ + + V +++A+I+ A+N +PN AL LF + ++G+KP ++TM+
Sbjct: 190 ------RRVFDKIGEPCVVAYNAIITSCARNSRPNEALALFRELQESGLKPTDVTMLVAL 243
Query: 427 CAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTS 486
+ A G L GRW HEYV N ++ A+IDMYAKCGS++ A VF + R T
Sbjct: 244 SSCALLGALDLGRWIHEYVKKNGFDQYVKVNTALIDMYAKCGSLDDAVSVFKDMPRRDTQ 303
Query: 487 VSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFK 546
W+A+I A HG + + + +++K ++ + ITF+G+L C H GLV+ G YF
Sbjct: 304 A--WSAMIVAYATHGHGSQAISMLREMKKAKVQPDEITFLGILYACSHTGLVEEGYEYFH 361
Query: 547 SMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNV 606
SM Y + P +KHYGCM+DLLGRAG+LE+A + I +P+K ++W TLL++ HGNV
Sbjct: 362 SMTHEYGIVPSIKHYGCMIDLLGRAGRLEEACKFIDELPIKPTPILWRTLLSSCSSHGNV 421
Query: 607 EVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
E+ + + + L SHG V+LSN+ A GRW+D +RK M D G ++PG S +
Sbjct: 422 EMAKLVIQRIFELDDSHGGDYVILSNLCARNGRWDDVNHLRKMMVDKGALKVPGCSSI 479
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 98/406 (24%), Positives = 178/406 (43%), Gaps = 72/406 (17%)
Query: 105 LNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISS 164
++ A +FDK P V + +M G+A+ D A+ + + G++P++ T +S++ +
Sbjct: 85 MDHAHRMFDKIPQPDIVLFNTMARGYARFDDPLRAILLCSQVLCSGLLPDDYTFSSLLKA 144
Query: 165 SVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSW 224
L + E + LH L +KL + + + L+NMY C+ + AR +FD++ E +V++
Sbjct: 145 CARLKALEEGKQLHCLAVKLGVGDNMYVCPTLINMYTACNDVDAARRVFDKIGEPCVVAY 204
Query: 225 NVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIA 284
N ++ A+ R +EAL ++R + G+
Sbjct: 205 NAIITSCARNS-------------------------------RPNEALALFRELQESGLK 233
Query: 285 PNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQ 344
P DV ++ +S+C A G IH + K GFD Y + +I YA CG ++
Sbjct: 234 PTDVTMLVALSSCALLGALDLGRWIHEYVKKNGFDQYVKVNTALIDMYAKCGSLD----- 288
Query: 345 FELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMAL 404
DA +F +M +RD +WSAMI YA + + A+
Sbjct: 289 --------------------------DAVSVFKDMPRRDTQAWSAMIVAYATHGHGSQAI 322
Query: 405 ELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG-----RWAHEYVLNNSITLNDNLSAA 459
+ M A V+P+EIT + + A + +G ++EG HEY + SI
Sbjct: 323 SMLREMKKAKVQPDEITFLGILYACSHTGLVEEGYEYFHSMTHEYGIVPSI----KHYGC 378
Query: 460 IIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANL 505
+ID+ + G + A + + + T + W ++ + HG+ +
Sbjct: 379 MIDLLGRAGRLEEACKFIDELPIKPTPIL-WRTLLSSCSSHGNVEM 423
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 95/371 (25%), Positives = 161/371 (43%), Gaps = 66/371 (17%)
Query: 15 ANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLI 74
+ L DY + S L+ C+ A+ +G+Q+H L K G+ N ++ +LIN+Y C
Sbjct: 129 SGLLPDDYTFS--SLLKACARLKALEEGKQLHCLAVKLGVGDNMYVCPTLINMYTAC--- 183
Query: 75 SQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQND 134
ND ++ AR VFDK C V+Y ++I A+N
Sbjct: 184 ---------------------------ND-VDAARRVFDKIGEPCVVAYNAIITSCARNS 215
Query: 135 CWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIIST 194
EAL +FR+++ G+ P +VT+ +SS LG + R +H V K D +V ++T
Sbjct: 216 RPNEALALFRELQESGLKPTDVTMLVALSSCALLGALDLGRWIHEYVKKNGFDQYVKVNT 275
Query: 195 NLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVS 254
L++MY C SL +A S+F +M R+ +W+ M+ +A G
Sbjct: 276 ALIDMYAKCGSLDDAVSVFKDMPRRDTQAWSAMIVAYATHG------------------- 316
Query: 255 WGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQ-IHSII 313
S+A++M R M + P+++ + ++ AC EG + HS+
Sbjct: 317 ------------HGSQAISMLREMKKAKVQPDEITFLGILYACSHTGLVEEGYEYFHSMT 364
Query: 314 VKAGFDCYDFIQATIIHFYAACGRINLA-RLQFELGIKDHIASWNALIAGFIRNGMIEDA 372
+ G +I GR+ A + EL IK W L++ +G +E A
Sbjct: 365 HEYGIVPSIKHYGCMIDLLGRAGRLEEACKFIDELPIKPTPILWRTLLSSCSSHGNVEMA 424
Query: 373 RQLFNNMQKRD 383
+ + + + D
Sbjct: 425 KLVIQRIFELD 435
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 108/237 (45%), Gaps = 35/237 (14%)
Query: 13 QKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCG 72
Q++ L+ +D + ++ AL C+ A+ G+ IH + K+G + + +LI++YAKCG
Sbjct: 228 QESGLKPTD--VTMLVALSSCALLGALDLGRWIHEYVKKNGFDQYVKVNTALIDMYAKCG 285
Query: 73 LISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQ 132
+LD DA VF P + ++++MI+ +A
Sbjct: 286 -------------SLD------------------DAVSVFKDMPRRDTQAWSAMIVAYAT 314
Query: 133 NDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWE-CRMLHGLVIKLMIDGFVI 191
+ +A+ + R+M+ V P+E+T ++ + H G + E H + + I +
Sbjct: 315 HGHGSQAISMLREMKKAKVQPDEITFLGILYACSHTGLVEEGYEYFHSMTHEYGIVPSIK 374
Query: 192 ISTNLLNMYCVCSSLVEARSLFDEMK-ERNIVSWNVMLNGFAKAGLVELARELFERI 247
++++ L EA DE+ + + W +L+ + G VE+A+ + +RI
Sbjct: 375 HYGCMIDLLGRAGRLEEACKFIDELPIKPTPILWRTLLSSCSSHGNVEMAKLVIQRI 431
>gi|225435933|ref|XP_002267829.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14170-like [Vitis vinifera]
Length = 455
Score = 292 bits (747), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 165/490 (33%), Positives = 256/490 (52%), Gaps = 68/490 (13%)
Query: 175 RMLHGLVIKLMIDGFVIISTNLLNMYCVCSSL-VEARSLFDEMKERNIVSWNVMLNGFAK 233
R LH +++ + VI+S+ LL MY L + S+F M RNI SWN+++ F++
Sbjct: 28 RHLHARLLRTSLYDNVILSSKLLLMYSQLGKLSPHSLSVFLHMPHRNIYSWNIIIGEFSR 87
Query: 234 AGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDL 293
+ +P K ID +LQ+ ++ P DV + L
Sbjct: 88 S-----------HLPHKS-------IDLFLQMRHFNQ--------------PPDVFTLPL 115
Query: 294 I-SACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDH 352
+ AC + + G+ +H + V+ G + F+ + ++ Y G+
Sbjct: 116 VLRACAASGSVKLGVSVHGLCVEMGMEKSLFVASALVFMYVTFGK--------------- 160
Query: 353 IASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVD 412
+ DAR LF+ M +RD W+AM++GYAQ+E+P +AL +F MV
Sbjct: 161 ----------------VLDARVLFDEMPERDAVLWTAMLAGYAQHEEPMLALSVFRQMVS 204
Query: 413 AGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINT 472
AGV + + M+S+ A G LK G+ H ++ + L NL A++ Y KC ++
Sbjct: 205 AGVALDGVVMISLLLACGQLGWLKHGKSVHGWITRRCLALGLNLGNALVYFYVKCAALGY 264
Query: 473 AFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTC 532
++ +F + +R V W++II G + G+ ++ L ++ + +K N +TF+G LS C
Sbjct: 265 SYNLFDKMPER--DVISWSSIILGYGLSGNVDIALDLFDRMRVAGVKPNDVTFLGALSAC 322
Query: 533 CHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVI 592
H G+V+ YF+ MK Y V P+LKHY CMVD LGRAG LEDAE I MP++AD +
Sbjct: 323 THTGMVERAHTYFEMMKE-YGVAPELKHYACMVDCLGRAGMLEDAERFIEEMPVEADGAV 381
Query: 593 WGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRD 652
G LL R+HGN EVGER AK L GL+P + V+L+NIYA AGR+EDA +R+ M+
Sbjct: 382 LGALLGGCRVHGNAEVGERVAKKLMGLEPEKASNYVMLANIYAGAGRFEDAEKVRQLMKQ 441
Query: 653 CGMKRLPGFS 662
+ ++PG S
Sbjct: 442 RKLSKVPGCS 451
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 108/546 (19%), Positives = 214/546 (39%), Gaps = 132/546 (24%)
Query: 43 QQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRN 102
+ +H+ + ++ L N + + L+ +Y++ G +S
Sbjct: 28 RHLHARLLRTSLYDNVILSSKLLLMYSQLGKLSP-------------------------- 61
Query: 103 DRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVI 162
+ VF P + S+ +I F+++ +++++F MR P+ TL V+
Sbjct: 62 ----HSLSVFLHMPHRNIYSWNIIIGEFSRSHLPHKSIDLFLQMRHFNQPPDVFTLPLVL 117
Query: 163 SSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIV 222
+ G + +HGL +++ ++ + +++ L+ MY +++AR LFDEM ER+ V
Sbjct: 118 RACAASGSVKLGVSVHGLCVEMGMEKSLFVASALVFMYVTFGKVLDARVLFDEMPERDAV 177
Query: 223 SWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDG 282
W ML G+A Q E AL+++R M+ G
Sbjct: 178 LWTAMLAGYA-------------------------------QHEEPMLALSVFRQMVSAG 206
Query: 283 IAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLAR 342
+A + V+++ L+ ACG+ G +H I + + +++FY C + +
Sbjct: 207 VALDGVVMISLLLACGQLGWLKHGKSVHGWITRRCLALGLNLGNALVYFYVKCAALGYSY 266
Query: 343 LQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNM 402
F+ + + SW+++I G+ +G + ++
Sbjct: 267 NLFDKMPERDVISWSSIILGYGLSGNV-------------------------------DI 295
Query: 403 ALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIID 462
AL+LF M AGVKPN++T + A +G ++ E + + A ++D
Sbjct: 296 ALDLFDRMRVAGVKPNDVTFLGALSACTHTGMVERAHTYFEMMKEYGVAPELKHYACMVD 355
Query: 463 MYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNS 522
+ G + A E F + A++ G +HG+A
Sbjct: 356 CLGRAGMLEDA-ERFIEEMPVEADGAVLGALLGGCRVHGNA------------------- 395
Query: 523 ITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPD-LKHYGCMVDLLGRAGQLEDAEEVI 581
++GER K + +EP+ +Y + ++ AG+ EDAE+V
Sbjct: 396 ----------------EVGERV---AKKLMGLEPEKASNYVMLANIYAGAGRFEDAEKVR 436
Query: 582 RSMPMK 587
+ M +
Sbjct: 437 QLMKQR 442
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 82/358 (22%), Positives = 153/358 (42%), Gaps = 95/358 (26%)
Query: 22 YELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMF 81
+ L LV LR C+A +V G +H L + G+E + F+ ++L+ +Y G
Sbjct: 111 FTLPLV--LRACAASGSVKLGVSVHGLCVEMGMEKSLFVASALVFMYVTFG--------- 159
Query: 82 DSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALE 141
++ DAR +FD+ P + V +T+M+ G+AQ++ AL
Sbjct: 160 ----------------------KVLDARVLFDEMPERDAVLWTAMLAGYAQHEEPMLALS 197
Query: 142 VFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYC 201
VFR M GV + V + S++ + LG + + +HG + + + + + L+ Y
Sbjct: 198 VFRQMVSAGVALDGVVMISLLLACGQLGWLKHGKSVHGWITRRCLALGLNLGNALVYFYV 257
Query: 202 VCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDG 261
C++L + +LFD+M ER+++SW+ ++ G+ +G V++A +LF+R
Sbjct: 258 KCAALGYSYNLFDKMPERDVISWSSIILGYGLSGNVDIALDLFDR--------------- 302
Query: 262 YLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCY 321
M G+ PNDV + +SAC H+ +V+ +
Sbjct: 303 ----------------MRVAGVKPNDVTFLGALSAC-----------THTGMVERAHTYF 335
Query: 322 DFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNM 379
+ ++ E G+ + + ++ R GM+EDA + M
Sbjct: 336 EMMK--------------------EYGVAPELKHYACMVDCLGRAGMLEDAERFIEEM 373
>gi|356574473|ref|XP_003555371.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Glycine max]
Length = 923
Score = 291 bits (746), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 185/638 (28%), Positives = 311/638 (48%), Gaps = 96/638 (15%)
Query: 25 ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSC 84
V+AL+ V G IH KS ++ ++ N+LI +YAKCG
Sbjct: 250 TFVAALQGVEDPSFVKLGMGIHGAALKSNHFADVYVANALIAMYAKCG------------ 297
Query: 85 STLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFR 144
R+ DA VF + VS+ +++ G QN+ +R+AL FR
Sbjct: 298 -------------------RMEDAERVFASMLCRDYVSWNTLLSGLVQNELYRDALNYFR 338
Query: 145 DMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCS 204
DM+ P++V++ ++I++S G + + +H I+ +D + I L++MY C
Sbjct: 339 DMQNSAQKPDQVSVLNLIAASGRSGNLLNGKEVHAYAIRNGLDSNMQIGNTLIDMYAKCC 398
Query: 205 SLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQ 264
V G+A FE + KD++SW T+I GY Q
Sbjct: 399 C--------------------VKHMGYA-----------FECMHEKDLISWTTIIAGYAQ 427
Query: 265 VERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFI 324
E EA+ ++R + G+ + +MI ++ AC +G +FI
Sbjct: 428 NECHLEAINLFRKVQVKGMDVDPMMIGSVLRAC------------------SGLKSRNFI 469
Query: 325 QATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDV 384
+ IH Y F+ + D I NA++ + G + AR+ F +++ +D+
Sbjct: 470 RE--IHGYV-----------FKRDLAD-IMLQNAIVNVYGEVGHRDYARRAFESIRSKDI 515
Query: 385 YSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEY 444
SW++MI+ N P ALELF+ + ++P+ I ++S A A+ +LK+G+ H +
Sbjct: 516 VSWTSMITCCVHNGLPVEALELFYSLKQTNIQPDSIAIISALSATANLSSLKKGKEIHGF 575
Query: 445 VLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDAN 504
++ L ++++++DMYA CG++ + ++F+ ++ R + W ++I MHG N
Sbjct: 576 LIRKGFFLEGPIASSLVDMYACCGTVENSRKMFHSVKQRDLIL--WTSMINANGMHGCGN 633
Query: 505 LTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCM 564
+ ++ + N+ + ITF+ +L C H+GL+ G+R+F+ MK Y +EP +HY CM
Sbjct: 634 EAIALFKKMTDENVIPDHITFLALLYACSHSGLMVEGKRFFEIMKYGYQLEPWPEHYACM 693
Query: 565 VDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHG 624
VDLL R+ LE+A + +RSMP+K +W LL A IH N E+GE AAK L +
Sbjct: 694 VDLLSRSNSLEEAYQFVRSMPIKPSSEVWCALLGACHIHSNKELGELAAKELLQSDTKNS 753
Query: 625 PSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
L+SNI+A GRW D +R M+ G+K+ PG S
Sbjct: 754 GKYALISNIFAADGRWNDVEEVRLRMKGNGLKKNPGCS 791
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 141/590 (23%), Positives = 242/590 (41%), Gaps = 121/590 (20%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
L C A A+ QGQQ+H+ + KS L + F+ L+++Y KCG
Sbjct: 53 LDLCVAVKALPQGQQLHARLLKSHLSA--FLATKLLHMYEKCG----------------- 93
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
L DA +VFD+ + ++ +M+ F + + EA+E++++MR+L
Sbjct: 94 --------------SLKDAVKVFDEMTERTIFTWNAMMGAFVSSGKYLEAIELYKEMRVL 139
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRM---LHGLVIKLMIDGFVIISTNLLNMYCVCSSL 206
GV + T SV+ + G + E R+ +HG+ +K FV + L+ MY C L
Sbjct: 140 GVAIDACTFPSVLKAC---GALGESRLGAEIHGVAVKCGFGEFVFVCNALIAMYGKCGDL 196
Query: 207 VEARSLFDE--MKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQ 264
AR LFD M++ + VSWN +++ G
Sbjct: 197 GGARVLFDGIMMEKEDTVSWNSIISAHVTEG----------------------------- 227
Query: 265 VERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFI 324
+ EAL+++R M G+A N V + G+ IH +K+ ++
Sbjct: 228 --KCLEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAALKSNHFADVYV 285
Query: 325 QATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDV 384
+I YA CGR+ A F + SWN L++G ++N + DA F +MQ
Sbjct: 286 ANALIAMYAKCGRMEDAERVFASMLCRDYVSWNTLLSGLVQNELYRDALNYFRDMQ---- 341
Query: 385 YSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEY 444
++ KP++++++++ A SG L G+ H Y
Sbjct: 342 ---------------------------NSAQKPDQVSVLNLIAASGRSGNLLNGKEVHAY 374
Query: 445 VLNNSITLNDNLSAAIIDMYAKCGSIN---TAFEVFYHIRDRTTSVSPWNAIICGLAMHG 501
+ N + N + +IDMYAKC + AFE H +D + W II G A +
Sbjct: 375 AIRNGLDSNMQIGNTLIDMYAKCCCVKHMGYAFECM-HEKDLIS----WTTIIAGYAQNE 429
Query: 502 DANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKH- 560
+ ++ ++ + + ++ + VL C L R F Y + DL
Sbjct: 430 CHLEAINLFRKVQVKGMDVDPMMIGSVLRACS-----GLKSRNFIREIHGYVFKRDLADI 484
Query: 561 --YGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEV 608
+V++ G G + A S+ K D+V W +++ +H + V
Sbjct: 485 MLQNAIVNVYGEVGHRDYARRAFESIRSK-DIVSWTSMITCC-VHNGLPV 532
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 143/587 (24%), Positives = 238/587 (40%), Gaps = 116/587 (19%)
Query: 28 SALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSC--S 85
S L+ C A G +IH + K G F+ N+LI +Y KCG + A+ +FD
Sbjct: 150 SVLKACGALGESRLGAEIHGVAVKCGFGEFVFVCNALIAMYGKCGDLGGARVLFDGIMME 209
Query: 86 TLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRD 145
D V+ N +IS ++ T KC EAL +FR
Sbjct: 210 KEDTVSWNSIISAHV--------------TEGKCL-----------------EALSLFRR 238
Query: 146 MRILGVIPNEVTLASVIS-----SSVHLG-GIWECRMLHGLVIKLMIDGFVIISTNLLNM 199
M+ +GV N T + + S V LG GI HG +K V ++ L+ M
Sbjct: 239 MQEVGVASNTYTFVAALQGVEDPSFVKLGMGI------HGAALKSNHFADVYVANALIAM 292
Query: 200 YCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMI 259
Y C + +A +F M R+ VSWN T++
Sbjct: 293 YAKCGRMEDAERVFASMLCRDYVSWN-------------------------------TLL 321
Query: 260 DGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFD 319
G +Q E +AL +R M P+ V +++LI+A GR+ G ++H+ ++ G D
Sbjct: 322 SGLVQNELYRDALNYFRDMQNSAQKPDQVSVLNLIAASGRSGNLLNGKEVHAYAIRNGLD 381
Query: 320 CYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNM 379
I T+I YA C + FE + + SW +IAG
Sbjct: 382 SNMQIGNTLIDMYAKCCCVKHMGYAFECMHEKDLISWTTIIAG----------------- 424
Query: 380 QKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGR 439
YAQNE A+ LF + G+ + + + SV A + + R
Sbjct: 425 --------------YAQNECHLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSRNFIR 470
Query: 440 WAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAM 499
H YV + + L AI+++Y + G + A F IR + + W ++I
Sbjct: 471 EIHGYVFKRDLA-DIMLQNAIVNVYGEVGHRDYARRAFESIRSK--DIVSWTSMITCCVH 527
Query: 500 HGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERY--FKSMKSVYNVEPD 557
+G L+++ L++ NI+ +SI I LS + + G+ F K + P
Sbjct: 528 NGLPVEALELFYSLKQTNIQPDSIAIISALSATANLSSLKKGKEIHGFLIRKGFFLEGPI 587
Query: 558 LKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHG 604
+VD+ G +E++ ++ S+ + D+++W +++ A+ +HG
Sbjct: 588 A---SSLVDMYACCGTVENSRKMFHSVKQR-DLILWTSMINANGMHG 630
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 111/487 (22%), Positives = 212/487 (43%), Gaps = 105/487 (21%)
Query: 16 NLQNSDYELALVSALRYCSAHIA---VSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCG 72
++QNS + VS L +A + G+++H+ ++GL+SN I N+LI++YAKC
Sbjct: 339 DMQNSAQKPDQVSVLNLIAASGRSGNLLNGKEVHAYAIRNGLDSNMQIGNTLIDMYAKC- 397
Query: 73 LISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQ 132
C + GY F+ K +S+T++I G+AQ
Sbjct: 398 -------------------CCVKHMGY-----------AFECMHEKDLISWTTIIAGYAQ 427
Query: 133 NDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVII 192
N+C EA+ +FR +++ G+ + + + SV+ + L R +HG V K + +++
Sbjct: 428 NECHLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSRNFIREIHGYVFKRDLAD-IML 486
Query: 193 STNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDV 252
++N+Y AR F+ ++ ++IVSW M+ GL A ELF + +
Sbjct: 487 QNAIVNVYGEVGHRDYARRAFESIRSKDIVSWTSMITCCVHNGLPVEALELFYSLKQTN- 545
Query: 253 VSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSI 312
I P+ + I+ +SA + +G +IH
Sbjct: 546 ------------------------------IQPDSIAIISALSATANLSSLKKGKEIHGF 575
Query: 313 IVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDA 372
+++ GF I ++++ YA C G +E++
Sbjct: 576 LIRKGFFLEGPIASSLVDMYACC-------------------------------GTVENS 604
Query: 373 RQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASS 432
R++F+++++RD+ W++MI+ + N A+ LF M D V P+ IT +++ A + S
Sbjct: 605 RKMFHSVKQRDLILWTSMINANGMHGCGNEAIALFKKMTDENVIPDHITFLALLYACSHS 664
Query: 433 GTLKEGRWAHEYVLNNSITLN--DNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPW 490
G + EG+ E ++ L A ++D+ ++ S+ A++ R+ + P
Sbjct: 665 GLMVEGKRFFE-IMKYGYQLEPWPEHYACMVDLLSRSNSLEEAYQFV-----RSMPIKPS 718
Query: 491 NAIICGL 497
+ + C L
Sbjct: 719 SEVWCAL 725
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 74/168 (44%), Gaps = 33/168 (19%)
Query: 2 PLDHFHSVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQ 61
P++ ++ ++ N+Q +A++SAL + ++ +G++IH + + G I
Sbjct: 531 PVEALELFYSLKQTNIQPDS--IAIISALSATANLSSLKKGKEIHGFLIRKGFFLEGPIA 588
Query: 62 NSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCV 121
+SL+++YA CG + ++ MF S D +
Sbjct: 589 SSLVDMYACCGTVENSRKMFHSVKQRDLIL------------------------------ 618
Query: 122 SYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLG 169
+TSMI + C EA+ +F+ M VIP+ +T +++ + H G
Sbjct: 619 -WTSMINANGMHGCGNEAIALFKKMTDENVIPDHITFLALLYACSHSG 665
>gi|297844796|ref|XP_002890279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336121|gb|EFH66538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 953
Score = 291 bits (746), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 193/668 (28%), Positives = 335/668 (50%), Gaps = 70/668 (10%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
++ C+ V G +H L+ K+GL + F+ N+L++ Y G +S A +FD +
Sbjct: 194 IKACAGISDVGIGLAVHGLVVKTGLVEDLFVGNALVSFYGTHGFVSDALKLFDIMPERNL 253
Query: 90 VACNIMISGYIRNDR----LNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRD 145
V+ N MI + N + D V P+ C + +G + W L + ++
Sbjct: 254 VSWNSMIRVFSDNGDDGAFMPDVATVVTVLPV--CAREREIGVGKGVHG-WAVKLSLDKE 310
Query: 146 MRILG-----------VIPNEVTLA-----SVISSSVHLGGIWECRMLHGL--VIKLMID 187
+ + +I +++ +V+S + +GG +HG +++ M+
Sbjct: 311 LVVNNALMDMYSKWGCIIDSQMIFKLNNNKNVVSWNTMVGGFSAEGDIHGTFDLLRQMLA 370
Query: 188 GFVIISTN---LLNMYCVC------SSLVEAR--SLFDEMKERNIVSWNVMLNGFAKAGL 236
G + + +LN VC SL E SL E +++ N + +AK G
Sbjct: 371 GSEDVKADEVTILNAVPVCFDESVLPSLKELHCYSLKQEFVYDELLA-NAFVASYAKCGS 429
Query: 237 VELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISA 296
+ A+ +F I SK + SW +I GY Q +L + M G+ P++ + L+SA
Sbjct: 430 LSYAQRVFHGIRSKTLNSWNALIGGYAQSSDPRLSLDAHLQMKNSGLLPDNFTVCSLLSA 489
Query: 297 CGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASW 356
C + + G ++H I++ + F+ +++ Y CG + ++ F+ + + SW
Sbjct: 490 CSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQVLFDAMEDNSLVSW 549
Query: 357 NALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVK 416
N +I G ++NG P AL LF MV G++
Sbjct: 550 NTVITGHLQNGF-------------------------------PERALGLFRQMVLYGIQ 578
Query: 417 PNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEV 476
P I+M++VF A + +L+ GR AH Y L + + N ++ +IIDMYAK G+I + +V
Sbjct: 579 PCGISMMTVFGACSLLPSLRLGREAHAYALKHLLEDNAFIACSIIDMYAKNGAITQSSKV 638
Query: 477 FYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAG 536
F ++++ S + WNA+I G MHG A +K++ ++++ + +TF+GVL+ C H+G
Sbjct: 639 FNGLKEK--SAASWNAMIMGYGMHGRAKEAIKLFEEMQRTGRNPDDLTFLGVLTACNHSG 696
Query: 537 LVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTL 596
L+ G RY MKS + ++P+LKHY C++D+LGRAGQL++A V M + DV IW +L
Sbjct: 697 LLHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDNALRVAAEMSEEPDVGIWNSL 756
Query: 597 LAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMK 656
L+ RIH N+E+GE+ A L L+P + VLLSN+YA G+W+D +R+ M++ ++
Sbjct: 757 LSWCRIHQNLEMGEKVAAKLFVLEPEKPENYVLLSNLYAGLGKWDDVRQVRQRMKEMSLR 816
Query: 657 RLPGFSGV 664
+ G S +
Sbjct: 817 KDAGCSWI 824
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 126/537 (23%), Positives = 218/537 (40%), Gaps = 79/537 (14%)
Query: 88 DPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDM- 146
D V C +I+ Y +D+R FD K + ++I +++N+ + E LE+F M
Sbjct: 119 DDVLCTRIITMYAMCGSPDDSRSAFDALRSKNLFQWNAVISSYSRNELYHEVLEMFIKMI 178
Query: 147 RILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSL 206
++P+ T VI + + + +HGLV+K + + + L++ Y +
Sbjct: 179 SKTHLLPDNFTFPCVIKACAGISDVGIGLAVHGLVVKTGLVEDLFVGNALVSFYGTHGFV 238
Query: 207 VEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVE 266
+A LFD M ERN+VSWN M+ F+ G DG
Sbjct: 239 SDALKLFDIMPERNLVSWNSMIRVFSDNG-----------------------DDG----- 270
Query: 267 RLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQA 326
P+ +V ++ C R G G +H VK D +
Sbjct: 271 ---------------AFMPDVATVVTVLPVCAREREIGVGKGVHGWAVKLSLDKELVVNN 315
Query: 327 TIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYS 386
++ Y+ G I +++ F+L ++ SWN ++ GF G I L M
Sbjct: 316 ALMDMYSKWGCIIDSQMIFKLNNNKNVVSWNTMVGGFSAEGDIHGTFDLLRQM------- 368
Query: 387 WSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVL 446
A +E VK +E+T+++ L + H Y L
Sbjct: 369 -------LAGSED---------------VKADEVTILNAVPVCFDESVLPSLKELHCYSL 406
Query: 447 NNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLT 506
++ L+ A + YAKCGS++ A VF+ IR +T ++ WNA+I G A D L+
Sbjct: 407 KQEFVYDELLANAFVASYAKCGSLSYAQRVFHGIRSKT--LNSWNALIGGYAQSSDPRLS 464
Query: 507 LKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVD 566
L + ++ + ++ T +LS C + LG+ + + +E DL Y ++
Sbjct: 465 LDAHLQMKNSGLLPDNFTVCSLLSACSKLKSLRLGKEVHGFIIRNW-LERDLFVYLSVLS 523
Query: 567 LLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVE--VGERAAKSLAGLQP 621
L G+L + + +M + +V W T++ +G E +G L G+QP
Sbjct: 524 LYIHCGELCTVQVLFDAMEDNS-LVSWNTVITGHLQNGFPERALGLFRQMVLYGIQP 579
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/344 (20%), Positives = 147/344 (42%), Gaps = 72/344 (20%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+ S L CS ++ G+++H I ++ LE + F+ S+++LY CG + + +FD+
Sbjct: 481 FTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQVLFDA 540
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
V+ N +I+G+++N GF + AL +F
Sbjct: 541 MEDNSLVSWNTVITGHLQN--------------------------GFPE-----RALGLF 569
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
R M + G+ P +++ +V + L + R H +K +++ I+ ++++MY
Sbjct: 570 RQMVLYGIQPCGISMMTVFGACSLLPSLRLGREAHAYALKHLLEDNAFIACSIIDMYAKN 629
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYL 263
++ ++ +F+ +KE++ SWN M+ G+ G
Sbjct: 630 GAITQSSKVFNGLKEKSAASWNAMIMGYGMHG---------------------------- 661
Query: 264 QVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQI-----HSIIVKAGF 318
R EA+ ++ M G P+D+ + +++AC + EGL+ S +K
Sbjct: 662 ---RAKEAIKLFEEMQRTGRNPDDLTFLGVLTACNHSGLLHEGLRYLDQMKSSFGLKPNL 718
Query: 319 DCYDFIQATIIHFYAACGRI-NLARLQFELGIKDHIASWNALIA 361
Y A +I G++ N R+ E+ + + WN+L++
Sbjct: 719 KHY----ACVIDMLGRAGQLDNALRVAAEMSEEPDVGIWNSLLS 758
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 71/359 (19%), Positives = 136/359 (37%), Gaps = 67/359 (18%)
Query: 293 LISACGRAMAFGEGLQIHSIIVKAG-FDCYDFIQATIIHFYAACGRINLARLQFELGIKD 351
L+ A G+ G +IH ++ + D + II YA CG + +R F+
Sbjct: 90 LLQASGKRKDIEMGRKIHHLVSGSTRLRSDDVLCTRIITMYAMCGSPDDSRSAFDALRSK 149
Query: 352 HIASWNALIAGFIRNGMIEDARQLFNNMQKR----------------------------- 382
++ WNA+I+ + RN + + ++F M +
Sbjct: 150 NLFQWNAVISSYSRNELYHEVLEMFIKMISKTHLLPDNFTFPCVIKACAGISDVGIGLAV 209
Query: 383 -----------DVYSWSAMISGYAQNEQPNMALELFHGMV-------------------D 412
D++ +A++S Y + + AL+LF M D
Sbjct: 210 HGLVVKTGLVEDLFVGNALVSFYGTHGFVSDALKLFDIMPERNLVSWNSMIRVFSDNGDD 269
Query: 413 AGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINT 472
P+ T+V+V A + G+ H + + S+ ++ A++DMY+K G I
Sbjct: 270 GAFMPDVATVVTVLPVCAREREIGVGKGVHGWAVKLSLDKELVVNNALMDMYSKWGCIID 329
Query: 473 AFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDL--EKRNIKLNSITFIGVLS 530
+ +F + +V WN ++ G + GD + T + + ++K + +T + +
Sbjct: 330 SQMIFK--LNNNKNVVSWNTMVGGFSAEGDIHGTFDLLRQMLAGSEDVKADEVTILNAVP 387
Query: 531 TCCHAG-LVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKA 588
C L L E + S+K + + L + V + G L A+ V + K
Sbjct: 388 VCFDESVLPSLKELHCYSLKQEFVYDELLAN--AFVASYAKCGSLSYAQRVFHGIRSKT 444
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 84/175 (48%), Gaps = 11/175 (6%)
Query: 429 IASSGTLKE---GRWAHEYVLNNS-ITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRT 484
+ +SG K+ GR H V ++ + +D L II MYA CGS + + F +R +
Sbjct: 91 LQASGKRKDIEMGRKIHHLVSGSTRLRSDDVLCTRIITMYAMCGSPDDSRSAFDALRSK- 149
Query: 485 TSVSPWNAIICGLAMHGDANLTLKIYSDL-EKRNIKLNSITFIGVLSTCCHAGLVDLG-E 542
++ WNA+I + + + L+++ + K ++ ++ TF V+ C AG+ D+G
Sbjct: 150 -NLFQWNAVISSYSRNELYHEVLEMFIKMISKTHLLPDNFTFPCVIKAC--AGISDVGIG 206
Query: 543 RYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLL 597
+ + DL +V G G + DA ++ MP + ++V W +++
Sbjct: 207 LAVHGLVVKTGLVEDLFVGNALVSFYGTHGFVSDALKLFDIMPER-NLVSWNSMI 260
>gi|15226737|ref|NP_181604.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75276036|sp|Q7XJN6.1|PP197_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g40720
gi|330254774|gb|AEC09868.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 860
Score = 291 bits (746), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 175/577 (30%), Positives = 295/577 (51%), Gaps = 66/577 (11%)
Query: 88 DPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMR 147
DP C ++S Y + + +A VF K + +M+ +A+ND AL++F MR
Sbjct: 306 DPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMR 365
Query: 148 ILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLV 207
V+P+ TL++VIS LG + +H + K I I + LL +Y C
Sbjct: 366 QKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDP 425
Query: 208 EARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVER 267
+A +F M+E KD+V+WG++I G + +
Sbjct: 426 DAYLVFKSMEE-------------------------------KDMVAWGSLISGLCKNGK 454
Query: 268 LSEALTMYRAMLCD--GIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQ 325
EAL ++ M D + P+ ++ + +AC A GLQ+H ++K G F+
Sbjct: 455 FKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVG 514
Query: 326 ATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVY 385
+++I Y+ CG + E A ++F +M ++
Sbjct: 515 SSLIDLYSKCG-------------------------------LPEMALKVFTSMSTENMV 543
Query: 386 SWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYV 445
+W++MIS Y++N P ++++LF+ M+ G+ P+ +++ SV AI+S+ +L +G+ H Y
Sbjct: 544 AWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYT 603
Query: 446 LNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANL 505
L I + +L A+IDMY KCG A +F ++ + S+ WN +I G HGD
Sbjct: 604 LRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHK--SLITWNLMIYGYGSHGDCIT 661
Query: 506 TLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMV 565
L ++ +++K + +TF+ ++S C H+G V+ G+ F+ MK Y +EP+++HY MV
Sbjct: 662 ALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMV 721
Query: 566 DLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGP 625
DLLGRAG LE+A I++MP++AD IW LL+ASR H NVE+G +A+ L ++P G
Sbjct: 722 DLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVELGILSAEKLLRMEPERGS 781
Query: 626 SRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
+ V L N+Y +AG +A + M++ G+ + PG S
Sbjct: 782 TYVQLINLYMEAGLKNEAAKLLGLMKEKGLHKQPGCS 818
Score = 155 bits (391), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 137/579 (23%), Positives = 244/579 (42%), Gaps = 101/579 (17%)
Query: 28 SALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTL 87
S L+ CSA +S G+ IH + G + FI SL+N+Y KCG + A +FD
Sbjct: 65 SLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFD----- 119
Query: 88 DPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMR 147
G+ ++ AR+V + SMI G+ + ++E + FR M
Sbjct: 120 ----------GWSQSQSGVSARDV---------TVWNSMIDGYFKFRRFKEGVGCFRRML 160
Query: 148 ILGVIPNEVTLASVISSSVHLGGIW--ECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSS 205
+ GV P+ +L+ V+S G E + +HG +++ +D + T L++MY
Sbjct: 161 VFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGL 220
Query: 206 LVEARSLFDEMKER-NIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQ 264
++A +F E++++ N+V WNVM+ GF +G+ E + +L+ + V T G L
Sbjct: 221 SIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGAL- 279
Query: 265 VERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFI 324
AC ++ G G QIH +VK G ++
Sbjct: 280 ------------------------------GACSQSENSGFGRQIHCDVVKMGLHNDPYV 309
Query: 325 QATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDV 384
+++ Y+ CG + A F + + WNA++A +
Sbjct: 310 CTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAY--------------------- 348
Query: 385 YSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEY 444
A+N+ AL+LF M V P+ T+ +V + G G+ H
Sbjct: 349 ----------AENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAE 398
Query: 445 VLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDAN 504
+ I + +A++ +Y+KCG A+ VF + ++ + W ++I GL +G
Sbjct: 399 LFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEK--DMVAWGSLISGLCKNGKFK 456
Query: 505 LTLKIYSDLEKRN--IKLNSITFIGVLSTCCHAGLVDLGERYFKSMKS---VYNVEPDLK 559
LK++ D++ + +K +S V + C + G + SM V NV
Sbjct: 457 EALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVG-- 514
Query: 560 HYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLA 598
++DL + G E A +V SM + ++V W ++++
Sbjct: 515 --SSLIDLYSKCGLPEMALKVFTSMSTE-NMVAWNSMIS 550
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 108/455 (23%), Positives = 192/455 (42%), Gaps = 80/455 (17%)
Query: 157 TLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEM 216
T S++ + L + + +HG V+ L I+T+L+NMY C L A +FD
Sbjct: 62 TFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFD-- 119
Query: 217 KERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYR 276
W+ +G + ++DV W +MIDGY + R E + +R
Sbjct: 120 ------GWSQSQSG----------------VSARDVTVWNSMIDGYFKFRRFKEGVGCFR 157
Query: 277 AMLCDGIAPNDVMIVDLISACGRAMAF--GEGLQIHSIIVKAGFDCYDFIQATIIHFYAA 334
ML G+ P+ + ++S + F EG QIH +++ D F++ +I Y
Sbjct: 158 RMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFK 217
Query: 335 CG-RINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLF----NNMQKRDVYSWSA 389
G I+ R+ E+ K ++ WN +I GF +G+ E + L+ NN K S++
Sbjct: 218 FGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTG 277
Query: 390 MISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNS 449
+ +Q+E GR H V+
Sbjct: 278 ALGACSQSENSGF-----------------------------------GRQIHCDVVKMG 302
Query: 450 ITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKI 509
+ + + +++ MY+KCG + A VF + D+ + WNA++ A + L +
Sbjct: 303 LHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEI--WNAMVAAYAENDYGYSALDL 360
Query: 510 YSDLEKRNIKLNSITFIGVLSTCCHAGLVDLG-----ERYFKSMKSVYNVEPDLKHYGCM 564
+ + ++++ +S T V+S C GL + G E + + ++S +E L
Sbjct: 361 FGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESAL------ 414
Query: 565 VDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAA 599
+ L + G DA V +SM K D+V WG+L++
Sbjct: 415 LTLYSKCGCDPDAYLVFKSMEEK-DMVAWGSLISG 448
>gi|225457427|ref|XP_002282084.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74630-like [Vitis vinifera]
Length = 643
Score = 291 bits (746), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 155/458 (33%), Positives = 246/458 (53%), Gaps = 33/458 (7%)
Query: 237 VELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVM-IVDLIS 295
++ AR LF P+ DV T+I G + + +L + M AP D L+
Sbjct: 55 LDYARRLFLHFPNPDVFMHNTLIRGLAESDTPQNSLITFVEMRRRLTAPLDSFSFAFLLK 114
Query: 296 ACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIAS 355
A + G+Q+H + G D + F+ T++ Y+ CG + A+ FE + ++ +
Sbjct: 115 AAASYRSLESGIQLHCQAIVHGLDTHLFVGTTLVSMYSECGFVAFAKKVFEEMFEPNVVA 174
Query: 356 WNA-------------------------------LIAGFIRNGMIEDARQLFNNMQKRDV 384
WNA ++AG+ + G +E AR+LF M +D
Sbjct: 175 WNAVVTACFRCGDVKGADMMFNRMPFRNLTSWNVMLAGYTKAGELELARKLFLEMPVKDD 234
Query: 385 YSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEY 444
SWS MI G+A N A F + G++PNE+++ A A +G ++ G+ H +
Sbjct: 235 VSWSTMIVGFAHNGFFYEAFGFFRELQQVGMRPNEVSLTGALSACADAGAIEFGKILHGF 294
Query: 445 VLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDAN 504
+ + +++ A++D Y+KCG++ A VF + ++ + VS W ++I GLAMHG
Sbjct: 295 IEKSGFLWMVSVNNALLDTYSKCGNVGMARLVFERMPEKRSIVS-WTSMIAGLAMHGYGE 353
Query: 505 LTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCM 564
++++ ++E+ I+ + I FI +L C HAGL++ G YF MK +YN+EP ++HYGCM
Sbjct: 354 EAIQLFHEMEESGIRPDGIAFISILYACSHAGLIEKGYEYFYKMKDIYNIEPAIEHYGCM 413
Query: 565 VDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHG 624
VDL GRAGQL+ A E I MP+ +IW TLL A IHGNV++ ER + L+ L P++
Sbjct: 414 VDLYGRAGQLDKAYEFIIHMPVLPTAIIWRTLLGACSIHGNVKLAERVKERLSELDPNNS 473
Query: 625 PSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
VLLSNIYA AG+W+D ++R+ M D M + PG+S
Sbjct: 474 GDHVLLSNIYAVAGKWKDVAAVRRSMTDQRMNKTPGWS 511
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 129/508 (25%), Positives = 227/508 (44%), Gaps = 97/508 (19%)
Query: 43 QQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRN 102
+Q+H+ + K+GL+++ I L L+ A S+ D+
Sbjct: 22 KQVHAYVCKTGLDTDPIIAGKL--------LLHSAVSVPDA------------------- 54
Query: 103 DRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIP-NEVTLASV 161
L+ AR +F P + ++I G A++D + +L F +MR P + + A +
Sbjct: 55 --LDYARRLFLHFPNPDVFMHNTLIRGLAESDTPQNSLITFVEMRRRLTAPLDSFSFAFL 112
Query: 162 ISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKE--- 218
+ ++ + LH I +D + + T L++MY C + A+ +F+EM E
Sbjct: 113 LKAAASYRSLESGIQLHCQAIVHGLDTHLFVGTTLVSMYSECGFVAFAKKVFEEMFEPNV 172
Query: 219 ----------------------------RNIVSWNVMLNGFAKAGLVELARELFERIPSK 250
RN+ SWNVML G+ KAG +ELAR+LF +P K
Sbjct: 173 VAWNAVVTACFRCGDVKGADMMFNRMPFRNLTSWNVMLAGYTKAGELELARKLFLEMPVK 232
Query: 251 DVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIH 310
D VSW TMI G+ EA +R + G+ PN+V + +SAC A A G +H
Sbjct: 233 DDVSWSTMIVGFAHNGFFYEAFGFFRELQQVGMRPNEVSLTGALSACADAGAIEFGKILH 292
Query: 311 SIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFE-LGIKDHIASWNALIAGFIRNGMI 369
I K+GF + ++ Y+ CG + +ARL FE + K I SW ++IAG +G
Sbjct: 293 GFIEKSGFLWMVSVNNALLDTYSKCGNVGMARLVFERMPEKRSIVSWTSMIAGLAMHGYG 352
Query: 370 EDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAI 429
E+A Q LFH M ++G++P+ I +S+ A
Sbjct: 353 EEAIQ-------------------------------LFHEMEESGIRPDGIAFISILYAC 381
Query: 430 ASSGTLKEGRWAHEYVLNNSITLNDNLS--AAIIDMYAKCGSINTAFEVFYHIRDRTTSV 487
+ +G +++G + + Y + + + + ++D+Y + G ++ A+E H+ T++
Sbjct: 382 SHAGLIEKG-YEYFYKMKDIYNIEPAIEHYGCMVDLYGRAGQLDKAYEFIIHMPVLPTAI 440
Query: 488 SPWNAIICGLAMHGDANLTLKIYSDLEK 515
W ++ ++HG+ L ++ L +
Sbjct: 441 I-WRTLLGACSIHGNVKLAERVKERLSE 467
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 147/311 (47%), Gaps = 63/311 (20%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
L+ +++ ++ G Q+H GL+++ F+ +L+++Y++CG ++ AK +F+ +
Sbjct: 113 LKAAASYRSLESGIQLHCQAIVHGLDTHLFVGTTLVSMYSECGFVAFAKKVFEEMFEPNV 172
Query: 90 V-------AC------------------------NIMISGYIRNDRLNDAREVFDKTPIK 118
V AC N+M++GY + L AR++F + P+K
Sbjct: 173 VAWNAVVTACFRCGDVKGADMMFNRMPFRNLTSWNVMLAGYTKAGELELARKLFLEMPVK 232
Query: 119 CCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLH 178
VS+++MI+GFA N + EA FR+++ +G+ PNEV+L +S+ G I ++LH
Sbjct: 233 DDVSWSTMIVGFAHNGFFYEAFGFFRELQQVGMRPNEVSLTGALSACADAGAIEFGKILH 292
Query: 179 GLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKE-RNIVSWNVMLNGFAKAGLV 237
G + K V ++ LL+ Y C ++ AR +F+ M E R+IVSW M+ G A G
Sbjct: 293 GFIEKSGFLWMVSVNNALLDTYSKCGNVGMARLVFERMPEKRSIVSWTSMIAGLAMHGYG 352
Query: 238 ELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISAC 297
E EA+ ++ M GI P+ + + ++ AC
Sbjct: 353 E-------------------------------EAIQLFHEMEESGIRPDGIAFISILYAC 381
Query: 298 GRAMAFGEGLQ 308
A +G +
Sbjct: 382 SHAGLIEKGYE 392
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 102/235 (43%), Gaps = 40/235 (17%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E++L AL C+ A+ G+ +H I KSG + N+L++ Y+KCG + A+ +F
Sbjct: 269 EVSLTGALSACADAGAIEFGKILHGFIEKSGFLWMVSVNNALLDTYSKCGNVGMARLVF- 327
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+R+ + R + VS+TSMI G A + EA+++
Sbjct: 328 --------------------ERMPEKRSI---------VSWTSMIAGLAMHGYGEEAIQL 358
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGI-----WECRMLHGLVIKLMIDGFVIISTNLL 197
F +M G+ P+ + S++ + H G I + +M I+ I+ + ++
Sbjct: 359 FHEMEESGIRPDGIAFISILYACSHAGLIEKGYEYFYKMKDIYNIEPAIEHY----GCMV 414
Query: 198 NMYCVCSSLVEARSLFDEMKE-RNIVSWNVMLNGFAKAGLVELARELFERIPSKD 251
++Y L +A M + W +L + G V+LA + ER+ D
Sbjct: 415 DLYGRAGQLDKAYEFIIHMPVLPTAIIWRTLLGACSIHGNVKLAERVKERLSELD 469
>gi|297824259|ref|XP_002880012.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325851|gb|EFH56271.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 542
Score = 291 bits (746), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 166/484 (34%), Positives = 271/484 (55%), Gaps = 9/484 (1%)
Query: 188 GFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLN---GFAKAGLVE--LARE 242
GFV +T L + CS++ E + + + + ++S V + F A + A
Sbjct: 20 GFVSGNTCLRLIDTRCSTMRELKQIHANLIKTGLISDTVAASRVLAFCCASPSDRNYAYL 79
Query: 243 LFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDG--IAPNDVMIVDLISACGRA 300
+F RI K+ W T+I G+ + A++++ MLC + P + + A
Sbjct: 80 VFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYASL 139
Query: 301 MAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALI 360
+G Q+H ++K G + FI+ T++H Y CG + A F + + +WN++I
Sbjct: 140 GLARDGRQLHGRVIKEGLEDDSFIRNTMLHMYVTCGCLVEAWRLFVGMMGFDVVAWNSII 199
Query: 361 AGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEI 420
G + G+I+ A++LF+ M +R+ SW++MISG+ +N + ALE+F M + VKP+
Sbjct: 200 MGLAKCGLIDQAQKLFDEMPQRNGVSWNSMISGFVRNGRFKDALEMFREMQERDVKPDGF 259
Query: 421 TMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHI 480
TMVS+ A A G ++GRW H+Y++ N LN + A+IDMY KCG +VF
Sbjct: 260 TMVSLLNACAYLGASEQGRWIHKYIVRNRFELNSIVITALIDMYCKCGCFEEGLKVFECA 319
Query: 481 RDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDL 540
T +S WN++I GLA +G + ++ +LE+ ++ +S++FIGVL+ C H+G V
Sbjct: 320 P--TKQLSCWNSMILGLANNGCEERAMDLFLELERTGLEPDSVSFIGVLTACAHSGEVHK 377
Query: 541 GERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAAS 600
+F+ M+ Y +EP +KHY CMV++LG AG L++AE +I+ MP++ D +IW +LLAA
Sbjct: 378 AGEFFRLMREKYMIEPSIKHYTCMVNVLGGAGLLDEAEALIKKMPVEGDTIIWSSLLAAC 437
Query: 601 RIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPG 660
R +GNVE+ +RAA L L P VL+SN YA G +E+A R M++ M++ G
Sbjct: 438 RKNGNVEMAKRAANCLKNLDPDETCGYVLMSNAYASYGLFEEAVEQRLLMKERQMEKEVG 497
Query: 661 FSGV 664
S +
Sbjct: 498 CSSI 501
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 131/520 (25%), Positives = 226/520 (43%), Gaps = 77/520 (14%)
Query: 102 NDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRI--LGVIPNEVTLA 159
+DR N A VF + K + ++I GF+++ A+ +F DM V P +T
Sbjct: 72 SDR-NYAYLVFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYP 130
Query: 160 SVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKER 219
SV + LG + R LHG VIK ++ I +L+MY C LVEA LF M
Sbjct: 131 SVFKAYASLGLARDGRQLHGRVIKEGLEDDSFIRNTMLHMYVTCGCLVEAWRLFVGMMGF 190
Query: 220 NIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAML 279
++V+WN ++ G AK GL++ A++LF+ +P ++ VSW +MI G+++ R +AL M+R M
Sbjct: 191 DVVAWNSIIMGLAKCGLIDQAQKLFDEMPQRNGVSWNSMISGFVRNGRFKDALEMFREMQ 250
Query: 280 CDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRIN 339
+ P+ +V L++AC A +G IH IV+ F+ + +I Y CG
Sbjct: 251 ERDVKPDGFTMVSLLNACAYLGASEQGRWIHKYIVRNRFELNSIVITALIDMYCKCGCFE 310
Query: 340 LARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQ 399
FE ++ WN++I G NG E A LF +++
Sbjct: 311 EGLKVFECAPTKQLSCWNSMILGLANNGCEERAMDLFLELER------------------ 352
Query: 400 PNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAA 459
G++P+ ++ + V A A S
Sbjct: 353 -------------TGLEPDSVSFIGVLTACAHS--------------------------- 372
Query: 460 IIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIK 519
G ++ A E F +R++ C + + G A L + + ++K ++
Sbjct: 373 --------GEVHKAGEFFRLMREKYMIEPSIKHYTCMVNVLGGAGLLDEAEALIKKMPVE 424
Query: 520 LNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLK-HYGCMVDLLGRAGQLEDAE 578
++I + +L+ C G V++ +R +K N++PD Y M + G E+A
Sbjct: 425 GDTIIWSSLLAACRKNGNVEMAKRAANCLK---NLDPDETCGYVLMSNAYASYGLFEEAV 481
Query: 579 E---VIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKS 615
E +++ M+ +V ++ +H V G++ KS
Sbjct: 482 EQRLLMKERQMEKEVGC-SSIEVDFEVHEFVSCGKKHPKS 520
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 90/348 (25%), Positives = 174/348 (50%), Gaps = 41/348 (11%)
Query: 42 GQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIR 101
G+Q+H + K GLE ++FI+N+++++Y CG + +A +F D VA N +I G +
Sbjct: 145 GRQLHGRVIKEGLEDDSFIRNTMLHMYVTCGCLVEAWRLFVGMMGFDVVAWNSIIMGLAK 204
Query: 102 NDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASV 161
++ A+++FD+ P + VS+ SMI GF +N +++ALE+FR+M+ V P+ T+ S+
Sbjct: 205 CGLIDQAQKLFDEMPQRNGVSWNSMISGFVRNGRFKDALEMFREMQERDVKPDGFTMVSL 264
Query: 162 ISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNI 221
+++ +LG + R +H +++ + I+ T L++MYC C E +F+ + +
Sbjct: 265 LNACAYLGASEQGRWIHKYIVRNRFELNSIVITALIDMYCKCGCFEEGLKVFECAPTKQL 324
Query: 222 VSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCD 281
WN M+ G A G E A +LF L++ER
Sbjct: 325 SCWNSMILGLANNGCEERAMDLF------------------LELER-------------T 353
Query: 282 GIAPNDVMIVDLISAC---GRAMAFGEGLQI--HSIIVKAGFDCYDFIQATIIHFYAACG 336
G+ P+ V + +++AC G GE ++ +++ Y +++ G
Sbjct: 354 GLEPDSVSFIGVLTACAHSGEVHKAGEFFRLMREKYMIEPSIKHY----TCMVNVLGGAG 409
Query: 337 RINLAR-LQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRD 383
++ A L ++ ++ W++L+A +NG +E A++ N ++ D
Sbjct: 410 LLDEAEALIKKMPVEGDTIIWSSLLAACRKNGNVEMAKRAANCLKNLD 457
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 98/220 (44%), Gaps = 33/220 (15%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+VS L C+ A QG+ IH I ++ E N+ + +LI++Y KCG
Sbjct: 259 FTMVSLLNACAYLGASEQGRWIHKYIVRNRFELNSIVITALIDMYCKCGC---------- 308
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
+ +VF+ P K + SMI+G A N C A+++F
Sbjct: 309 ---------------------FEEGLKVFECAPTKQLSCWNSMILGLANNGCEERAMDLF 347
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVI-KLMIDGFVIISTNLLNMYCV 202
++ G+ P+ V+ V+++ H G + + L+ K MI+ + T ++N+
Sbjct: 348 LELERTGLEPDSVSFIGVLTACAHSGEVHKAGEFFRLMREKYMIEPSIKHYTCMVNVLGG 407
Query: 203 CSSLVEARSLFDEMK-ERNIVSWNVMLNGFAKAGLVELAR 241
L EA +L +M E + + W+ +L K G VE+A+
Sbjct: 408 AGLLDEAEALIKKMPVEGDTIIWSSLLAACRKNGNVEMAK 447
>gi|356524120|ref|XP_003530680.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g40405-like [Glycine max]
Length = 616
Score = 291 bits (746), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 159/470 (33%), Positives = 268/470 (57%), Gaps = 13/470 (2%)
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGL-------VELARELFERIPSKDVVSW 255
C++L E + + ++ + I++ N +G A + ++ A +L + + +
Sbjct: 19 CTTLKEMKQIHAQLVVKGILN-NPHFHGQFVATIALHNTTNLDYANKLLNHNNNPTLFTL 77
Query: 256 GTMIDGYLQVERLSEALTMYRAMLC---DGIAPNDVMIVDLISACGRAMAFGEGLQIHSI 312
+MI Y + S++ Y +L + ++P++ L+ C + A GL +H
Sbjct: 78 NSMIRAYSKSSTPSKSFHFYANILHSNNNNLSPDNYTFTFLVRTCAQLQAHVTGLCVHGA 137
Query: 313 IVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDA 372
++K GF+ +Q ++ YA G ++ F+ ++ + + A++ + G I+ A
Sbjct: 138 VIKHGFELDPHVQTGLVFMYAELGCLSSCHNVFDGAVEPDLVTQTAMLNACAKCGDIDFA 197
Query: 373 RQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASS 432
R++F+ M +RD +W+AMI+GYAQ + AL++FH M GVK NE++MV V A
Sbjct: 198 RKMFDEMPERDHVTWNAMIAGYAQCGRSREALDVFHLMQMEGVKLNEVSMVLVLSACTHL 257
Query: 433 GTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNA 492
L GRW H YV + + L A++DMYAKCG+++ A +VF+ +++R +V W++
Sbjct: 258 QVLDHGRWVHAYVERYKVRMTVTLGTALVDMYAKCGNVDRAMQVFWGMKER--NVYTWSS 315
Query: 493 IICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVY 552
I GLAM+G +L +++D+++ ++ N ITFI VL C GLV+ G ++F SM++VY
Sbjct: 316 AIGGLAMNGFGEESLDLFNDMKREGVQPNGITFISVLKGCSVVGLVEEGRKHFDSMRNVY 375
Query: 553 NVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERA 612
+ P L+HYG MVD+ GRAG+L++A I SMPM+ V W LL A R++ N E+GE A
Sbjct: 376 GIGPQLEHYGLMVDMYGRAGRLKEALNFINSMPMRPHVGAWSALLHACRMYKNKELGEIA 435
Query: 613 AKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
+ + L+ + + VLLSNIYAD WE S+R+ M+ G+K+LPG S
Sbjct: 436 QRKIVELEDKNDGAYVLLSNIYADYKNWESVSSLRQTMKAKGVKKLPGCS 485
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 105/452 (23%), Positives = 196/452 (43%), Gaps = 59/452 (13%)
Query: 79 SMFDSCSTLDP---VACNIMISGYIRNDR----------------LNDAREVFDKTPIKC 119
S+ +SC+TL + +++ G + N L+ A ++ +
Sbjct: 14 SLLNSCTTLKEMKQIHAQLVVKGILNNPHFHGQFVATIALHNTTNLDYANKLLNHNNNPT 73
Query: 120 CVSYTSMIMGFAQNDCWREALEVFRDM---RILGVIPNEVTLASVISSSVHLGGIWECRM 176
+ SMI ++++ ++ + ++ + P+ T ++ + L
Sbjct: 74 LFTLNSMIRAYSKSSTPSKSFHFYANILHSNNNNLSPDNYTFTFLVRTCAQLQAHVTGLC 133
Query: 177 LHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGL 236
+HG VIK + + T L+ MY L ++FD E ++V+ MLN AK G
Sbjct: 134 VHGAVIKHGFELDPHVQTGLVFMYAELGCLSSCHNVFDGAVEPDLVTQTAMLNACAKCGD 193
Query: 237 VELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISA 296
++ AR++F+ +P +D V+W MI GY Q R EAL ++ M +G+ N+V +V ++SA
Sbjct: 194 IDFARKMFDEMPERDHVTWNAMIAGYAQCGRSREALDVFHLMQMEGVKLNEVSMVLVLSA 253
Query: 297 CGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKD-HIAS 355
C G +H+ + + + ++ YA CG ++ A +Q G+K+ ++ +
Sbjct: 254 CTHLQVLDHGRWVHAYVERYKVRMTVTLGTALVDMYAKCGNVDRA-MQVFWGMKERNVYT 312
Query: 356 WNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGV 415
W++ I G NG E++ LFN+M++ GV
Sbjct: 313 WSSAIGGLAMNGFGEESLDLFNDMKRE-------------------------------GV 341
Query: 416 KPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLS--AAIIDMYAKCGSINTA 473
+PN IT +SV + G ++EGR H + N + L ++DMY + G + A
Sbjct: 342 QPNGITFISVLKGCSVVGLVEEGR-KHFDSMRNVYGIGPQLEHYGLMVDMYGRAGRLKEA 400
Query: 474 FEVFYHIRDRTTSVSPWNAIICGLAMHGDANL 505
F + V W+A++ M+ + L
Sbjct: 401 LN-FINSMPMRPHVGAWSALLHACRMYKNKEL 431
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 96/366 (26%), Positives = 168/366 (45%), Gaps = 40/366 (10%)
Query: 1 TPLDHFH---SVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESN 57
TP FH ++ +S NL +Y + +R C+ A G +H + K G E +
Sbjct: 89 TPSKSFHFYANILHSNNNNLSPDNYTFTFL--VRTCAQLQAHVTGLCVHGAVIKHGFELD 146
Query: 58 TFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPI 117
+Q L+ +YA+ G +S ++FD D V M++ + ++ AR++FD+ P
Sbjct: 147 PHVQTGLVFMYAELGCLSSCHNVFDGAVEPDLVTQTAMLNACAKCGDIDFARKMFDEMPE 206
Query: 118 KCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRML 177
+ V++ +MI G+AQ REAL+VF M++ GV NEV++ V+S+ HL + R +
Sbjct: 207 RDHVTWNAMIAGYAQCGRSREALDVFHLMQMEGVKLNEVSMVLVLSACTHLQVLDHGRWV 266
Query: 178 HGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLV 237
H V + + V + T L++MY C ++ A +F MKERN+ +W+ + G A G
Sbjct: 267 HAYVERYKVRMTVTLGTALVDMYAKCGNVDRAMQVFWGMKERNVYTWSSAIGGLAMNGFG 326
Query: 238 ELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISAC 297
E E+L ++ M +G+ PN + + ++ C
Sbjct: 327 E-------------------------------ESLDLFNDMKREGVQPNGITFISVLKGC 355
Query: 298 GRAMAFGEGLQ-IHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQF--ELGIKDHIA 354
EG + S+ G ++ Y GR+ A L F + ++ H+
Sbjct: 356 SVVGLVEEGRKHFDSMRNVYGIGPQLEHYGLMVDMYGRAGRLKEA-LNFINSMPMRPHVG 414
Query: 355 SWNALI 360
+W+AL+
Sbjct: 415 AWSALL 420
>gi|356528388|ref|XP_003532785.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
mitochondrial-like [Glycine max]
Length = 721
Score = 291 bits (746), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 173/569 (30%), Positives = 302/569 (53%), Gaps = 48/569 (8%)
Query: 99 YIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTL 158
++ N L++AR +FD+ P YT M+ +AQN REA+++FR + V V+
Sbjct: 65 HLNNRSLDEARAIFDQIPTPHVSLYTIMLHAYAQNHRLREAIDLFRRIPFKDV----VSW 120
Query: 159 ASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMK- 217
S+I +H G I R L + + + + + LL + V EA +LF M+
Sbjct: 121 NSIIKGCLHCGDIVTARKLFDEMPRRTVVSWTTLVDGLLRLGIV----QEAETLFWAMEP 176
Query: 218 -ERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYR 276
+R++ +WN M++G+ G V+ A +LF ++PS+DV+SW +MI G + +AL ++R
Sbjct: 177 MDRDVAAWNAMIHGYCSNGRVDDALQLFCQMPSRDVISWSSMIAGLDHNGKSEQALVLFR 236
Query: 277 AMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAG---FDCYDFIQATIIHFYA 333
M+ G+ + ++V +SA + A+ G+QIH + K G FD +F+ A+++ FYA
Sbjct: 237 DMVASGVCLSSGVLVCGLSAAAKIPAWRVGIQIHCSVFKLGDWHFD--EFVSASLVTFYA 294
Query: 334 ACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISG 393
C ++ E A ++F + + V W+A+++G
Sbjct: 295 GCKQM-------------------------------EAACRVFGEVVYKSVVIWTALLTG 323
Query: 394 YAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLN 453
Y N++ ALE+F M+ V PNE + S + ++ G+ H + +
Sbjct: 324 YGLNDKHREALEVFGEMMRIDVVPNESSFTSALNSCCGLEDIERGKVIHAAAVKMGLESG 383
Query: 454 DNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDL 513
+ +++ MY+KCG ++ A VF I ++ +V WN++I G A HG L +++ +
Sbjct: 384 GYVGGSLVVMYSKCGYVSDAVYVFKGINEK--NVVSWNSVIVGCAQHGCGMWALALFNQM 441
Query: 514 EKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQ 573
+ + + IT G+LS C H+G++ +F+ +V ++HY MVD+LGR G+
Sbjct: 442 LREGVDPDGITVTGLLSACSHSGMLQKARCFFRYFGQKRSVTLTIEHYTSMVDVLGRCGE 501
Query: 574 LEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNI 633
LE+AE V+ SMPMKA+ ++W LL+A R H N+++ +RAA + ++P + VLLSN+
Sbjct: 502 LEEAEAVVMSMPMKANSMVWLALLSACRKHSNLDLAKRAANQIFEIEPDCSAAYVLLSNL 561
Query: 634 YADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
YA + RW + IR++M+ G+ + PG S
Sbjct: 562 YASSSRWAEVALIRRKMKHNGVVKKPGSS 590
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 124/533 (23%), Positives = 210/533 (39%), Gaps = 140/533 (26%)
Query: 62 NSLINLYAKCGLISQAKSMFD--------SCSTL-------------------------D 88
NS+I CG I A+ +FD S +TL D
Sbjct: 121 NSIIKGCLHCGDIVTARKLFDEMPRRTVVSWTTLVDGLLRLGIVQEAETLFWAMEPMDRD 180
Query: 89 PVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRI 148
A N MI GY N R++DA ++F + P + +S++SMI G N +AL +FRDM
Sbjct: 181 VAAWNAMIHGYCSNGRVDDALQLFCQMPSRDVISWSSMIAGLDHNGKSEQALVLFRDMVA 240
Query: 149 LGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKL---MIDGFVIISTNLLNMYCVCSS 205
GV + L +S++ + +H V KL D FV S +L+ Y C
Sbjct: 241 SGVCLSSGVLVCGLSAAAKIPAWRVGIQIHCSVFKLGDWHFDEFV--SASLVTFYAGCKQ 298
Query: 206 LVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQV 265
+ A +F E+ +++V W +L G+ GL + R
Sbjct: 299 MEAACRVFGEVVYKSVVIWTALLTGY---GLNDKHR------------------------ 331
Query: 266 ERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQ 325
EAL ++ M+ + PN+ +++C G IH+ VK G + ++
Sbjct: 332 ----EALEVFGEMMRIDVVPNESSFTSALNSCCGLEDIERGKVIHAAAVKMGLESGGYVG 387
Query: 326 ATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVY 385
+++ Y+ CG ++ A F+ + ++ SWN++I G ++G
Sbjct: 388 GSLVVMYSKCGYVSDAVYVFKGINEKNVVSWNSVIVGCAQHG----------------CG 431
Query: 386 SWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYV 445
W AL LF+ M+ GV P+ IT+ + A + SG L++ R Y
Sbjct: 432 MW---------------ALALFNQMLREGVDPDGITVTGLLSACSHSGMLQKARCFFRYF 476
Query: 446 -LNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDAN 504
S+TL +++D+ +CG + A A++ + M
Sbjct: 477 GQKRSVTLTIEHYTSMVDVLGRCGELEEA-----------------EAVVMSMPM----- 514
Query: 505 LTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPD 557
K NS+ ++ +LS C +DL +R + ++ +EPD
Sbjct: 515 --------------KANSMVWLALLSACRKHSNLDLAKR---AANQIFEIEPD 550
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 113/260 (43%), Gaps = 63/260 (24%)
Query: 42 GQQIHSLIFKSG-LESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYI 100
G QIH +FK G + F+ SL+ YA C K M +C
Sbjct: 266 GIQIHCSVFKLGDWHFDEFVSASLVTFYAGC------KQMEAAC---------------- 303
Query: 101 RNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLAS 160
VF + K V +T+++ G+ ND REALEVF +M + V+PNE + S
Sbjct: 304 ---------RVFGEVVYKSVVIWTALLTGYGLNDKHREALEVFGEMMRIDVVPNESSFTS 354
Query: 161 VISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERN 220
++S L I +++H +K+ ++ + +L+ MY C + +A +F + E+N
Sbjct: 355 ALNSCCGLEDIERGKVIHAAAVKMGLESGGYVGGSLVVMYSKCGYVSDAVYVFKGINEKN 414
Query: 221 IVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLC 280
+VSWN ++ G A+ G W AL ++ ML
Sbjct: 415 VVSWNSVIVGCAQHG----------------CGMW---------------ALALFNQMLR 443
Query: 281 DGIAPNDVMIVDLISACGRA 300
+G+ P+ + + L+SAC +
Sbjct: 444 EGVDPDGITVTGLLSACSHS 463
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 119/271 (43%), Gaps = 46/271 (16%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E + SAL C + +G+ IH+ K GLES ++ SL+ +Y+KCG +S
Sbjct: 349 ESSFTSALNSCCGLEDIERGKVIHAAAVKMGLESGGYVGGSLVVMYSKCGYVS------- 401
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
DA VF K VS+ S+I+G AQ+ C AL +
Sbjct: 402 ------------------------DAVYVFKGINEKNVVSWNSVIVGCAQHGCGMWALAL 437
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRML-----HGLVIKLMIDGFVIISTNLL 197
F M GV P+ +T+ ++S+ H G + + R + L I+ + T+++
Sbjct: 438 FNQMLREGVDPDGITVTGLLSACSHSGMLQKARCFFRYFGQKRSVTLTIEHY----TSMV 493
Query: 198 NMYCVCSSLVEARSLFDEMKER-NIVSWNVMLNGFAKAGLVELAR----ELFERIPSKDV 252
++ C L EA ++ M + N + W +L+ K ++LA+ ++FE P
Sbjct: 494 DVLGRCGELEEAEAVVMSMPMKANSMVWLALLSACRKHSNLDLAKRAANQIFEIEPDCS- 552
Query: 253 VSWGTMIDGYLQVERLSEALTMYRAMLCDGI 283
++ + + Y R +E + R M +G+
Sbjct: 553 AAYVLLSNLYASSSRWAEVALIRRKMKHNGV 583
Score = 45.8 bits (107), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 59/288 (20%), Positives = 108/288 (37%), Gaps = 60/288 (20%)
Query: 353 IASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELF----- 407
I S L+ + N +++AR +F+ + V ++ M+ YAQN + A++LF
Sbjct: 55 IKSHKYLLFHHLNNRSLDEARAIFDQIPTPHVSLYTIMLHAYAQNHRLREAIDLFRRIPF 114
Query: 408 ----------------------HGMVDAGVKPNEITMVSVFCAIASSGTLKEGR---WAH 442
+ D + ++ ++ + G ++E WA
Sbjct: 115 KDVVSWNSIIKGCLHCGDIVTARKLFDEMPRRTVVSWTTLVDGLLRLGIVQEAETLFWAM 174
Query: 443 EYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGD 502
E + + N A+I Y G ++ A ++F + R V W+++I GL +G
Sbjct: 175 EPMDRDVAAWN-----AMIHGYCSNGRVDDALQLFCQMPSR--DVISWSSMIAGLDHNGK 227
Query: 503 ANLTLKIYSDLEKRNIKLNSITFIGVLSTCC-----------HAGLVDLGERYFKSMKSV 551
+ L ++ D+ + L+S + LS H + LG+ +F S
Sbjct: 228 SEQALVLFRDMVASGVCLSSGVLVCGLSAAAKIPAWRVGIQIHCSVFKLGDWHFDEFVS- 286
Query: 552 YNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAA 599
+V Q+E A V + K+ VVIW LL
Sbjct: 287 ----------ASLVTFYAGCKQMEAACRVFGEVVYKS-VVIWTALLTG 323
>gi|147771061|emb|CAN60969.1| hypothetical protein VITISV_033859 [Vitis vinifera]
Length = 722
Score = 291 bits (746), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 199/646 (30%), Positives = 327/646 (50%), Gaps = 41/646 (6%)
Query: 37 IAVSQGQQIHSLIFKSGLESNTFIQNSLINLYA--KCGLISQAKSMFDSCSTLDPVACNI 94
+A+ + IH+ F++ L ++ + + A G + A +F + N
Sbjct: 98 LAMQALKLIHARAFRANLHNHALVLAKIFRFAAVSPNGCLHYADRLFSQIHQPNTFFYNT 157
Query: 95 MISGYIRNDRLNDAREVFDKTPIKCC----VSYTSMIMGFAQNDCWREALEVFRDMRILG 150
+I GY ++ + + ++F++ C ++T ++ G ++ + ++ G
Sbjct: 158 LIRGYSKSSSPSQSVQLFNQMRRNCVDPDGFTFTFLLKGRSRMRIDLPLIVASDEIHGAG 217
Query: 151 VIPNEV-TLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSS---- 205
V ++ TL S IS+ V +H L S +L +M C +
Sbjct: 218 VDYDKYKTLKSYISNKV----------MHMLPT----------SQSLASMAEACLAMQAL 257
Query: 206 -LVEARSLFDEMKERNIVSWNVM-LNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYL 263
L+ AR+ + +V + + G + A LF +I + + T+I GY
Sbjct: 258 KLIHARAFRANLHNHALVLAKIFRFAAVSPNGCLHYADRLFSQIHQPNTFFYNTLIRGYS 317
Query: 264 QVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGL-----QIHSIIVKAGF 318
+ S+++ ++ M + + P+ L+ R M L +IH ++K GF
Sbjct: 318 KSSSPSQSVQLFNQMRRNCVDPDGFTFTFLLKGRSR-MRIDLPLIVASDEIHGAVLKLGF 376
Query: 319 DCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNN 378
+ F+ +IH YAA G A F + + SW+ L+ +R G +E ARQ+F+
Sbjct: 377 CFHLFVMNALIHLYAARGVPAAAHQVFNEMVGADVVSWSGLVVAHVRAGELELARQVFDE 436
Query: 379 MQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG 438
M +RDV SW+ M+SGYAQ ++ ALELF M D GV+P+E+ MV V A S G L+ G
Sbjct: 437 MPERDVVSWTVMVSGYAQAKRSREALELFREMRDVGVRPDEVAMVIVISACTSLGDLETG 496
Query: 439 RWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLA 498
H Y+ N +L A+IDMYAKCG ++ A++VF ++ + S+ WN++I A
Sbjct: 497 FEVHRYIDENGFGWMVSLCNALIDMYAKCGCMDLAWQVFNNMERK--SLITWNSMISACA 554
Query: 499 MHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDL 558
HG+A ++++ + I+ + +TF+ +L+ H G VD G F+SM+ Y VE +
Sbjct: 555 NHGNAEDAFRVFTLMLXSGIRPDGVTFLALLTAYTHKGWVDDGYGLFESMQRDYGVEAGV 614
Query: 559 KHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAG 618
+HYGCMVD+LGRAG+LE+A ++I SM M + V+WG LLAA RI+G+VE+GER K L
Sbjct: 615 EHYGCMVDMLGRAGRLEEAYKLITSMSMPCNDVVWGALLAACRIYGDVEMGERVLKKLIE 674
Query: 619 LQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
L+P G +LL +IY AGR +A +R+ M G K+ G S V
Sbjct: 675 LKPDEGGYYILLRDIYVAAGRRAEAIELRRAMDVNGAKKTLGCSWV 720
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 123/603 (20%), Positives = 247/603 (40%), Gaps = 100/603 (16%)
Query: 130 FAQNDCWREALEVFRDMRILGVIPNEV-TLASVISSSVHLGGIWECRMLHGLVIKLMIDG 188
+AQ RE LE+FR++R + V P +V T+ L +++H L
Sbjct: 33 YAQAKRSREPLELFREIRDVRVRPTDVVTMGVDYDKYKTLKSYISNKVMHMLPT------ 86
Query: 189 FVIISTNLLNMYCVCSS-----LVEARSLFDEMKERNIVSWNVM-LNGFAKAGLVELARE 242
S +L +M C + L+ AR+ + +V + + G + A
Sbjct: 87 ----SQSLASMAEACLAMQALKLIHARAFRANLHNHALVLAKIFRFAAVSPNGCLHYADR 142
Query: 243 LFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMA 302
LF +I + + T+I GY + S+++ ++ M + + P+ L+ R
Sbjct: 143 LFSQIHQPNTFFYNTLIRGYSKSSSPSQSVQLFNQMRRNCVDPDGFTFTFLLKGRSRMRI 202
Query: 303 FGEGLQIHSIIVKAGFDCYD-------FIQATIIHFYA----------ACGRINLARLQF 345
+ I AG D YD +I ++H AC + +L
Sbjct: 203 DLPLIVASDEIHGAGVD-YDKYKTLKSYISNKVMHMLPTSQSLASMAEACLAMQALKLIH 261
Query: 346 ELGIKDHIASWNALIAGFIR------NGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQ 399
+ ++ + ++A R NG + A +LF+ + + + + ++ +I GY+++
Sbjct: 262 ARAFRANLHNHALVLAKIFRFAAVSPNGCLHYADRLFSQIHQPNTFFYNTLIRGYSKSSS 321
Query: 400 PNMALELFHGMVDAGVKPNEITM-----------VSVFCAIASS----GTLKEGRWAHEY 444
P+ +++LF+ M V P+ T + + +AS LK G H +
Sbjct: 322 PSQSVQLFNQMRRNCVDPDGFTFTFLLKGRSRMRIDLPLIVASDEIHGAVLKLGFCFHLF 381
Query: 445 VLNNSITL--------------NDNLSAAIID------MYAKCGSINTAFEVFYHIRDRT 484
V+N I L N+ + A ++ + + G + A +VF + +R
Sbjct: 382 VMNALIHLYAARGVPAAAHQVFNEMVGADVVSWSGLVVAHVRAGELELARQVFDEMPER- 440
Query: 485 TSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLG--- 541
V W ++ G A + L+++ ++ ++ + + + V+S C G ++ G
Sbjct: 441 -DVVSWTVMVSGYAQAKRSREALELFREMRDVGVRPDEVAMVIVISACTSLGDLETGFEV 499
Query: 542 ERY-----FKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTL 596
RY F M S+ N ++D+ + G ++ A +V +M K+ ++ W ++
Sbjct: 500 HRYIDENGFGWMVSLCN---------ALIDMYAKCGCMDLAWQVFNNMERKS-LITWNSM 549
Query: 597 LAASRIHGNVEVGERAAKSL--AGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEM-RDC 653
++A HGN E R + +G++P G + + L Y G +D + + + M RD
Sbjct: 550 ISACANHGNAEDAFRVFTLMLXSGIRPD-GVTFLALLTAYTHKGWVDDGYGLFESMQRDY 608
Query: 654 GMK 656
G++
Sbjct: 609 GVE 611
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 110/268 (41%), Gaps = 42/268 (15%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E+A+V + C++ + G ++H I ++G + N+LI++YAKCG
Sbjct: 477 EVAMVIVISACTSLGDLETGFEVHRYIDENGFGWMVSLCNALIDMYAKCG---------- 526
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
C L A +VF+ K +++ SMI A + +A V
Sbjct: 527 -CMDL--------------------AWQVFNNMERKSLITWNSMISACANHGNAEDAFRV 565
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTN----LLN 198
F M G+ P+ VT +++++ H G + + +GL + D V +++
Sbjct: 566 FTLMLXSGIRPDGVTFLALLTAYTHKGWVDDG---YGLFESMQRDYGVEAGVEHYGCMVD 622
Query: 199 MYCVCSSLVEARSLFDEMKER-NIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGT 257
M L EA L M N V W +L G VE+ + +++ G
Sbjct: 623 MLGRAGRLEEAYKLITSMSMPCNDVVWGALLAACRIYGDVEMGERVLKKLIELKPDEGGY 682
Query: 258 MI---DGYLQVERLSEALTMYRAMLCDG 282
I D Y+ R +EA+ + RAM +G
Sbjct: 683 YILLRDIYVAAGRRAEAIELRRAMDVNG 710
>gi|15217508|ref|NP_172412.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806401|sp|Q56XI1.2|PPR25_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09410
gi|3482916|gb|AAC33201.1| Hypothetical protein [Arabidopsis thaliana]
gi|91805759|gb|ABE65608.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332190317|gb|AEE28438.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 705
Score = 291 bits (745), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 183/581 (31%), Positives = 312/581 (53%), Gaps = 23/581 (3%)
Query: 85 STLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFR 144
+T+ P N+ I+ R ++++AR++FD K S+ SM+ G+ N R+A ++F
Sbjct: 13 TTIPPPTANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFD 72
Query: 145 DMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCS 204
+M +I + ++S + G I E R V LM + V+ T L+ Y
Sbjct: 73 EMPDRNII----SWNGLVSGYMKNGEIDEARK----VFDLMPERNVVSWTALVKGYVHNG 124
Query: 205 SLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQ 264
+ A SLF +M E+N VSW VML GF + G ++ A +L+E IP KD ++ +MI G +
Sbjct: 125 KVDVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCK 184
Query: 265 VERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFI 324
R+ EA ++ M + + +++ G+ + +I ++ + +
Sbjct: 185 EGRVDEAREIFDEMSERSV----ITWTTMVTGYGQNNRVDDARKIFDVMPEKT----EVS 236
Query: 325 QATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDV 384
+++ Y GRI A FE+ + + NA+I+G + G I AR++F++M++R+
Sbjct: 237 WTSMLMGYVQNGRIEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERND 296
Query: 385 YSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEY 444
SW +I + +N AL+LF M GV+P T++S+ AS +L G+ H
Sbjct: 297 ASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQ 356
Query: 445 VLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTS--VSPWNAIICGLAMHGD 502
++ ++ +++ ++ MY KCG + + +F DR S + WN+II G A HG
Sbjct: 357 LVRCQFDVDVYVASVLMTMYIKCGELVKSKLIF----DRFPSKDIIMWNSIISGYASHGL 412
Query: 503 ANLTLKIYSDLE-KRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHY 561
LK++ ++ + K N +TF+ LS C +AG+V+ G + ++SM+SV+ V+P HY
Sbjct: 413 GEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHY 472
Query: 562 GCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQP 621
CMVD+LGRAG+ +A E+I SM ++ D +WG+LL A R H ++V E AK L ++P
Sbjct: 473 ACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEP 532
Query: 622 SHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
+ + +LLSN+YA GRW D +RK M+ +++ PG S
Sbjct: 533 ENSGTYILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCS 573
Score = 155 bits (392), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 124/487 (25%), Positives = 231/487 (47%), Gaps = 88/487 (18%)
Query: 62 NSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCV 121
N I ++ G I +A+ +FDSC + + N M++GY N DAR++FD+ P + +
Sbjct: 21 NVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNII 80
Query: 122 SYTSMIMGFAQNDCWREALEVFRDMRILGVIP--NEVTLASVISSSVHLGGI-------W 172
S+ ++ G+ +N EA +VF ++P N V+ +++ VH G + W
Sbjct: 81 SWNGLVSGYMKNGEIDEARKVF------DLMPERNVVSWTALVKGYVHNGKVDVAESLFW 134
Query: 173 ECRMLHGLVIKLMIDGFV--------------------IISTNLLNMYCVCSSLVEARSL 212
+ + + +M+ GF+ I T++++ C + EAR +
Sbjct: 135 KMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREI 194
Query: 213 FDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEAL 272
FDEM ER++++W M+ G+ + V+ AR++F+ +P K VSW +M+ GY+Q R+ +A
Sbjct: 195 FDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAE 254
Query: 273 TMYRAMLCDGIAPNDVMIVDL-----ISACGRAM---------AFGEGLQIHSIIVKAGF 318
++ M + + MI L I+ R ++ ++IH + GF
Sbjct: 255 ELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHE---RNGF 311
Query: 319 -----DCYDFIQ--------ATIIHFYAACGRI-----------NLARLQFELGIKDHIA 354
D + +Q T+I + C + L R QF++ + ++A
Sbjct: 312 ELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDV--YVA 369
Query: 355 SWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAG 414
S L+ +I+ G + ++ +F+ +D+ W+++ISGYA + AL++F M +G
Sbjct: 370 S--VLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSG 427
Query: 415 -VKPNEITMVSVFCAIASSGTLKEGRWAHEYVLN----NSITLNDNLSAAIIDMYAKCGS 469
KPNE+T V+ A + +G ++EG +E + + IT + A ++DM + G
Sbjct: 428 STKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAH---YACMVDMLGRAGR 484
Query: 470 INTAFEV 476
N A E+
Sbjct: 485 FNEAMEM 491
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 91/349 (26%), Positives = 155/349 (44%), Gaps = 48/349 (13%)
Query: 55 ESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDK 114
+ + + S+I+ K G + +A+ +FD S + M++GY +N+R++DAR++FD
Sbjct: 169 DKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDV 228
Query: 115 TPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIP--------------------- 153
P K VS+TSM+MG+ QN +A E+F M + VI
Sbjct: 229 MPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVF 288
Query: 154 ------NEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLV 207
N+ + +VI +H +E L L I + G L+++ VC+SL
Sbjct: 289 DSMKERNDASWQTVI--KIHERNGFELEAL-DLFILMQKQGVRPTFPTLISILSVCASLA 345
Query: 208 E-----------ARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWG 256
R FD ++ +V++ + K G + ++ +F+R PSKD++ W
Sbjct: 346 SLHHGKQVHAQLVRCQFD----VDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWN 401
Query: 257 TMIDGYLQVERLSEALTMYRAMLCDG-IAPNDVMIVDLISACGRAMAFGEGLQIHSIIVK 315
++I GY EAL ++ M G PN+V V +SAC A EGL+I+ +
Sbjct: 402 SIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMES 461
Query: 316 A-GFDCYDFIQATIIHFYAACGRINLARLQFE-LGIKDHIASWNALIAG 362
G A ++ GR N A + + ++ A W +L+
Sbjct: 462 VFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGA 510
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 70/135 (51%), Gaps = 6/135 (4%)
Query: 25 ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSC 84
L+S L C++ ++ G+Q+H+ + + + + ++ + L+ +Y KCG + ++K +FD
Sbjct: 333 TLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRF 392
Query: 85 STLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCC-----VSYTSMIMGFAQNDCWREA 139
+ D + N +ISGY + +A +VF + P+ V++ + + + E
Sbjct: 393 PSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEG 452
Query: 140 LEVFRDMR-ILGVIP 153
L+++ M + GV P
Sbjct: 453 LKIYESMESVFGVKP 467
>gi|15234044|ref|NP_193619.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75098703|sp|O49399.2|PP321_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g18840
gi|5738365|emb|CAA16741.2| putative protein [Arabidopsis thaliana]
gi|7268678|emb|CAB78886.1| putative protein [Arabidopsis thaliana]
gi|332658697|gb|AEE84097.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 545
Score = 291 bits (745), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 160/448 (35%), Positives = 242/448 (54%), Gaps = 36/448 (8%)
Query: 237 VELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISA 296
V A + RI S + + ++I Y ALT++R ML + P+ ++ A
Sbjct: 90 VSYAHSILNRIGSPNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKA 149
Query: 297 CGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFE-LGIKDHIAS 355
C F EG QIH + +K+G F++ T+++ Y G +AR + + ++D + S
Sbjct: 150 CAAFCGFEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAV-S 208
Query: 356 WNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQ-----------NEQP---- 400
WN+L++ ++ G++++AR LF+ M++R+V SW+ MISGYA + P
Sbjct: 209 WNSLLSAYLEKGLVDEARALFDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDV 268
Query: 401 ----------------NMALELFHGMVDAGV-KPNEITMVSVFCAIASSGTLKEGRWAHE 443
N LE+F+ M+D KP+ T+VSV A AS G+L +G W H
Sbjct: 269 VSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHV 328
Query: 444 YVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDA 503
Y+ + I + L+ A++DMY+KCG I+ A EVF R VS WN+II L++HG
Sbjct: 329 YIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKR--DVSTWNSIISDLSVHGLG 386
Query: 504 NLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGC 563
L+I+S++ K N ITFIGVLS C H G++D + F+ M SVY VEP ++HYGC
Sbjct: 387 KDALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGC 446
Query: 564 MVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSH 623
MVDLLGR G++E+AEE++ +P ++ +LL A + G +E ER A L L
Sbjct: 447 MVDLLGRMGKIEEAEELVNEIPADEASILLESLLGACKRFGQLEQAERIANRLLELNLRD 506
Query: 624 GPSRVLLSNIYADAGRWEDAFSIRKEMR 651
+SN+YA GRWE R+ MR
Sbjct: 507 SSGYAQMSNLYASDGRWEKVIDGRRNMR 534
Score = 142 bits (358), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 124/510 (24%), Positives = 211/510 (41%), Gaps = 95/510 (18%)
Query: 13 QKANLQN-SDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKC 71
QK NL+ S V L + ++++ QQ H+ + K+GL +TF + L+ A
Sbjct: 25 QKENLKKMSVCSSTPVPILSFTERAKSLTEIQQAHAFMLKTGLFHDTFSASKLVAFAATN 84
Query: 72 GLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFA 131
+ K++ + S L+ + +G+ N S+I +A
Sbjct: 85 ---PEPKTVSYAHSILNRIGSP---NGFTHN----------------------SVIRAYA 116
Query: 132 QNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVI 191
+ AL VFR+M + V P++ + V+ + G E R +HGL IK + V
Sbjct: 117 NSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFIKSGLVTDVF 176
Query: 192 ISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKD 251
+ L+N+Y AR + D M R+ VSWN +L+ + + GLV+ AR LF+ + ++
Sbjct: 177 VENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARALFDEMEERN 236
Query: 252 VVSWGTMIDGYLQVERLSEA-------------------------------LTMYRAMLC 280
V SW MI GY + EA L ++ ML
Sbjct: 237 VESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLD 296
Query: 281 DGI-APNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRIN 339
D P+ +V ++SAC + +G +H I K G + F+ ++ Y+ CG+I+
Sbjct: 297 DSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKID 356
Query: 340 LARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQ 399
A F K +++WN++I+ +G+ +D
Sbjct: 357 KALEVFRATSKRDVSTWNSIISDLSVHGLGKD---------------------------- 388
Query: 400 PNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLS-- 457
ALE+F MV G KPN IT + V A G L + R E ++++ + +
Sbjct: 389 ---ALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKLFE-MMSSVYRVEPTIEHY 444
Query: 458 AAIIDMYAKCGSINTAFEVFYHIRDRTTSV 487
++D+ + G I A E+ I S+
Sbjct: 445 GCMVDLLGRMGKIEEAEELVNEIPADEASI 474
Score = 129 bits (323), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 101/412 (24%), Positives = 184/412 (44%), Gaps = 82/412 (19%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKC------------------ 71
L+ C+A +G+QIH L KSGL ++ F++N+L+N+Y +
Sbjct: 147 LKACAAFCGFEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDA 206
Query: 72 -------------GLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIK 118
GL+ +A+++FD + + N MISGY + +A+EVFD P++
Sbjct: 207 VSWNSLLSAYLEKGLVDEARALFDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVR 266
Query: 119 CCVSYTSMIMGFAQNDCWREALEVFRDMRILGV-IPNEVTLASVISSSVHLGGIWECRML 177
VS+ +M+ +A C+ E LEVF M P+ TL SV+S+ LG + + +
Sbjct: 267 DVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWV 326
Query: 178 HGLVIK--LMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAG 235
H + K + I+GF ++T L++MY C + +A +F +R++ +WN +++ + G
Sbjct: 327 HVYIDKHGIEIEGF--LATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHG 384
Query: 236 LVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLIS 295
L KD AL ++ M+ +G PN + + ++S
Sbjct: 385 L------------GKD-------------------ALEIFSEMVYEGFKPNGITFIGVLS 413
Query: 296 ACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHF------YAACGRINLA-RLQFELG 348
AC + ++ ++ Y ++ TI H+ G+I A L E+
Sbjct: 414 ACNHVGMLDQARKLFEMMSS----VYR-VEPTIEHYGCMVDLLGRMGKIEEAEELVNEIP 468
Query: 349 IKDHIASWNALIAGFIRNGMIEDARQLFNNMQK---RDVYSWSAMISGYAQN 397
+ +L+ R G +E A ++ N + + RD ++ M + YA +
Sbjct: 469 ADEASILLESLLGACKRFGQLEQAERIANRLLELNLRDSSGYAQMSNLYASD 520
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 99/248 (39%), Gaps = 71/248 (28%)
Query: 9 VFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLY 68
VFN + LVS L C++ ++SQG+ +H I K G+E F+ +L+++Y
Sbjct: 290 VFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMY 349
Query: 69 AKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIM 128
+KCG I + A EVF T + ++ S+I
Sbjct: 350 SKCGKIDK-------------------------------ALEVFRATSKRDVSTWNSIIS 378
Query: 129 GFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDG 188
+ + ++ALE+F +M G PN +T V+S+ H+G M+D
Sbjct: 379 DLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVG---------------MLD- 422
Query: 189 FVIISTNLLNMYCVCSSLVEARSLFDEMK-----ERNIVSWNVMLNGFAKAGLVELAREL 243
+AR LF+ M E I + M++ + G +E A EL
Sbjct: 423 -------------------QARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEEL 463
Query: 244 FERIPSKD 251
IP+ +
Sbjct: 464 VNEIPADE 471
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.324 0.137 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,689,331,081
Number of Sequences: 23463169
Number of extensions: 380898540
Number of successful extensions: 1379761
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 7939
Number of HSP's successfully gapped in prelim test: 3425
Number of HSP's that attempted gapping in prelim test: 1118631
Number of HSP's gapped (non-prelim): 84213
length of query: 665
length of database: 8,064,228,071
effective HSP length: 149
effective length of query: 516
effective length of database: 8,863,183,186
effective search space: 4573402523976
effective search space used: 4573402523976
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 80 (35.4 bits)