BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043580
(665 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P0C8Q8|PP394_ARATH Pentatricopeptide repeat-containing protein At5g19020,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E42 PE=2
SV=1
Length = 685
Score = 790 bits (2040), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/650 (58%), Positives = 505/650 (77%), Gaps = 2/650 (0%)
Query: 18 QNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQA 77
++SD E ALVSAL C++ V+ G+QIH + KSGL+SN +I NS++N+YAKC L++ A
Sbjct: 36 ESSDTERALVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADA 95
Query: 78 KSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWR 137
+S+F + LD + NIM+ GY+R+ RL DA ++FD P + CVSYT++I G+AQN+ W
Sbjct: 96 ESVFRDHAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWS 155
Query: 138 EALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLL 197
EA+E+FR+MR LG++ NEVTLA+VIS+ HLGGIW+CRML L IKL ++G V +STNLL
Sbjct: 156 EAMELFREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLL 215
Query: 198 NMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGT 257
+MYC+C L +AR LFDEM ERN+V+WNVMLNG++KAGL+E A ELF++I KD+VSWGT
Sbjct: 216 HMYCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGT 275
Query: 258 MIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAG 317
MIDG L+ +L EAL Y ML G+ P++VM+VDL+SA R++ +GLQ+H IVK G
Sbjct: 276 MIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRG 335
Query: 318 FDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFN 377
FDCYDF+QATIIHFYA I LA QFE +KDHIAS NALIAGF++NGM+E AR++F+
Sbjct: 336 FDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFD 395
Query: 378 NMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAG-VKPNEITMVSVFCAIASSGTLK 436
+D++SW+AMISGYAQ+ P +AL LF M+ + VKP+ ITMVSVF AI+S G+L+
Sbjct: 396 QTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLE 455
Query: 437 EGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRD-RTTSVSPWNAIIC 495
EG+ AH+Y+ ++I NDNL+AAIIDMYAKCGSI TA +F+ ++ ++++SPWNAIIC
Sbjct: 456 EGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIIC 515
Query: 496 GLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVE 555
G A HG A L L +YSDL+ IK NSITF+GVLS CCHAGLV+LG+ YF+SMKS + +E
Sbjct: 516 GSATHGHAKLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIE 575
Query: 556 PDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKS 615
PD+KHYGCMVDLLG+AG+LE+A+E+I+ MP+KADV+IWG LL+ASR HGNVE+ E AA
Sbjct: 576 PDIKHYGCMVDLLGKAGRLEEAKEMIKKMPVKADVMIWGMLLSASRTHGNVEIAELAATE 635
Query: 616 LAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGVV 665
LA + PSHG +V+LSN+YADAGRWED +R+EMR ++ FSGVV
Sbjct: 636 LAAIDPSHGGCKVMLSNVYADAGRWEDVALVREEMRTRDVEWSRAFSGVV 685
>sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protein At2g22070
OS=Arabidopsis thaliana GN=PCMP-H41 PE=3 SV=1
Length = 786
Score = 412 bits (1058), Expect = e-114, Method: Compositional matrix adjust.
Identities = 224/624 (35%), Positives = 358/624 (57%), Gaps = 4/624 (0%)
Query: 42 GQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIR 101
Q +H + KSGL + ++ N+L+N+Y+K G A+ +FD + N ++S Y +
Sbjct: 33 AQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSK 92
Query: 102 NDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASV 161
++ E FD+ P + VS+T+MI+G+ + +A+ V DM G+ P + TL +V
Sbjct: 93 RGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNV 152
Query: 162 ISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNI 221
++S + + +H ++KL + G V +S +LLNMY C + A+ +FD M R+I
Sbjct: 153 LASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDI 212
Query: 222 VSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCD 281
SWN M+ + G ++LA FE++ +D+V+W +MI G+ Q AL ++ ML D
Sbjct: 213 SSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRD 272
Query: 282 GI-APNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINL 340
+ +P+ + ++SAC G QIHS IV GFD + +I Y+ CG +
Sbjct: 273 SLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVET 332
Query: 341 ARLQFEL-GIKD-HIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNE 398
AR E G KD I + AL+ G+I+ G + A+ +F +++ RDV +W+AMI GY Q+
Sbjct: 333 ARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHG 392
Query: 399 QPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSA 458
A+ LF MV G +PN T+ ++ +S +L G+ H + + + ++S
Sbjct: 393 SYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSN 452
Query: 459 AIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNI 518
A+I MYAK G+I +A F IR +VS W ++I LA HG A L+++ + +
Sbjct: 453 ALITMYAKAGNITSASRAFDLIRCERDTVS-WTSMIIALAQHGHAEEALELFETMLMEGL 511
Query: 519 KLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAE 578
+ + IT++GV S C HAGLV+ G +YF MK V + P L HY CMVDL GRAG L++A+
Sbjct: 512 RPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQ 571
Query: 579 EVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAG 638
E I MP++ DVV WG+LL+A R+H N+++G+ AA+ L L+P + + L+N+Y+ G
Sbjct: 572 EFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACG 631
Query: 639 RWEDAFSIRKEMRDCGMKRLPGFS 662
+WE+A IRK M+D +K+ GFS
Sbjct: 632 KWEEAAKIRKSMKDGRVKKEQGFS 655
Score = 190 bits (483), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 130/493 (26%), Positives = 235/493 (47%), Gaps = 45/493 (9%)
Query: 170 GIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLN 229
G + +++H VIK + V + NL+N+Y + AR LFDEM R SWN +L+
Sbjct: 29 GRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLS 88
Query: 230 GFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVM 289
++K G ++ E F+++P +D VSW TMI GY + + +A+ + M+ +GI P
Sbjct: 89 AYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFT 148
Query: 290 IVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGI 349
+ +++++ G ++HS IVK G + ++++ YA CG +A+ F+ +
Sbjct: 149 LTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMV 208
Query: 350 KDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHG 409
I+SWNA+IA ++ G ++ A F M +RD+ +W++MISG+ Q AL++F
Sbjct: 209 VRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSK 268
Query: 410 MV-DAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCG 468
M+ D+ + P+ T+ SV A A+ L G+ H +++ ++ + A+I MY++CG
Sbjct: 269 MLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCG 328
Query: 469 SINTAFE---------------------------------VFYHIRDRTTSVSPWNAIIC 495
+ TA +F ++DR V W A+I
Sbjct: 329 GVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDR--DVVAWTAMIV 386
Query: 496 GLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKS-MKS--VY 552
G HG + ++ + + NS T +LS + G++ S +KS +Y
Sbjct: 387 GYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIY 446
Query: 553 NVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERA 612
+V ++ + +AG + A + + D V W +++ A HG+ E
Sbjct: 447 SVSVS----NALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALEL 502
Query: 613 AKS--LAGLQPSH 623
++ + GL+P H
Sbjct: 503 FETMLMEGLRPDH 515
Score = 178 bits (452), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 147/567 (25%), Positives = 254/567 (44%), Gaps = 74/567 (13%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
+ L + L +A + G+++HS I K GL N + NSL+N+YAKCG AK +FD
Sbjct: 146 QFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFD 205
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
D + N MI+ +++ +++ A F++ + V++ SMI GF Q AL++
Sbjct: 206 RMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDI 265
Query: 143 FRDM-RILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYC 201
F M R + P+ TLASV+S+ +L + + +H ++ D I+ L++MY
Sbjct: 266 FSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYS 325
Query: 202 VCSSLVEARSLFDE--MKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMI 259
C + AR L ++ K+ I + +L+G+ K G + A+ +F + +DVV+W MI
Sbjct: 326 RCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMI 385
Query: 260 DGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFD 319
GY Q EA+ ++R+M+ G PN + ++S + G QIH VK+G
Sbjct: 386 VGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEI 445
Query: 320 CYDFIQATIIHFYAACGRINLARLQFEL-GIKDHIASWNALIAGFIRNGMIEDARQLFNN 378
+ +I YA G I A F+L + SW ++I ++G E+
Sbjct: 446 YSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEE------- 498
Query: 379 MQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG 438
ALELF M+ G++P+ IT V VF A +G + +G
Sbjct: 499 ------------------------ALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQG 534
Query: 439 RWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLA 498
R + F ++D + + C +
Sbjct: 535 R-----------------------------------QYFDMMKDVDKIIPTLSHYACMVD 559
Query: 499 MHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDL 558
+ G A L + +EK I+ + +T+ +LS C +DLG+ + + + +EP+
Sbjct: 560 LFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGK---VAAERLLLLEPEN 616
Query: 559 K-HYGCMVDLLGRAGQLEDAEEVIRSM 584
Y + +L G+ E+A ++ +SM
Sbjct: 617 SGAYSALANLYSACGKWEEAAKIRKSM 643
>sp|Q9FRI5|PPR57_ARATH Pentatricopeptide repeat-containing protein At1g25360
OS=Arabidopsis thaliana GN=PCMP-H74 PE=2 SV=1
Length = 790
Score = 374 bits (960), Expect = e-102, Method: Compositional matrix adjust.
Identities = 230/668 (34%), Positives = 353/668 (52%), Gaps = 34/668 (5%)
Query: 4 DHFHSVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNS 63
D ++ N ANL+ L LR S +A + +H I G + I N
Sbjct: 6 DLVRAIANRYAANLR-------LCLPLRRTSLQLA----RAVHGNIITFGFQPRAHILNR 54
Query: 64 LINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPI--KCCV 121
LI++Y K ++ A+ +FD S D +A M+SGY + + AR VF+K P+ + V
Sbjct: 55 LIDVYCKSSELNYARQLFDEISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTV 114
Query: 122 SYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISS-SVHLGGIWECRMLHGL 180
Y +MI GF+ N+ A+ +F M+ G P+ T ASV++ ++ +C H
Sbjct: 115 MYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAA 174
Query: 181 VIKLMIDGFVIISTNLLNMYCVCSS----LVEARSLFDEMKERNIVSWNVMLNGFAKAGL 236
+K +S L+++Y C+S L AR +FDE+ E++ SW M+ G+ K G
Sbjct: 175 ALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGY 234
Query: 237 VELARELFERIPSK-DVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLIS 295
+L EL E + +V++ MI GY+ EAL M R M+ GI ++ +I
Sbjct: 235 FDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIR 294
Query: 296 ACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIAS 355
AC A G Q+H+ +++ + F +++ Y CG+ + AR FE + S
Sbjct: 295 ACATAGLLQLGKQVHAYVLRREDFSFHF-DNSLVSLYYKCGKFDEARAIFEKMPAKDLVS 353
Query: 356 WNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGV 415
WNAL++G++ +G I +A+ +F M+++++ SW MISG A+N L+LF M G
Sbjct: 354 WNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGF 413
Query: 416 KPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSA--AIIDMYAKCGSINTA 473
+P + + A G G+ H +L I + +LSA A+I MYAKCG + A
Sbjct: 414 EPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLK--IGFDSSLSAGNALITMYAKCGVVEEA 471
Query: 474 FEVFYHIRDRT----TSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVL 529
+VF RT SVS WNA+I L HG + +Y ++ K+ I+ + IT + VL
Sbjct: 472 RQVF-----RTMPCLDSVS-WNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVL 525
Query: 530 STCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKAD 589
+ C HAGLVD G +YF SM++VY + P HY ++DLL R+G+ DAE VI S+P K
Sbjct: 526 TACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPT 585
Query: 590 VVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKE 649
IW LL+ R+HGN+E+G AA L GL P H + +LLSN++A G+WE+ +RK
Sbjct: 586 AEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKL 645
Query: 650 MRDCGMKR 657
MRD G+K+
Sbjct: 646 MRDRGVKK 653
>sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protein At4g02750
OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1
Length = 781
Score = 367 bits (941), Expect = e-100, Method: Compositional matrix adjust.
Identities = 215/675 (31%), Positives = 348/675 (51%), Gaps = 73/675 (10%)
Query: 5 HFHSVFNSQKANLQNS--------------DYELALVSALRYCSAHIAVSQGQQIHSLIF 50
+FHS+ + + +Q S ++ +A+ S +R + A+ +F
Sbjct: 36 NFHSLKRATQTQIQKSQTKPLLKCGDSDIKEWNVAISSYMRTGRCNEALR--------VF 87
Query: 51 KSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDARE 110
K ++ N +I+ Y + G A+ +FD D V+ N+MI GY+RN L ARE
Sbjct: 88 KRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARE 147
Query: 111 VFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGG 170
+F+ P + S+ +M+ G+AQN C +A VF M N+V+ +++S+ V
Sbjct: 148 LFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRM----PEKNDVSWNALLSAYVQNSK 203
Query: 171 IWECRMLHGLVIKLMIDGFVIISTN-LLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLN 229
+ E ML + + ++S N LL + +VEAR FD M R++VSWN ++
Sbjct: 204 MEEACMLFK-----SRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIIT 258
Query: 230 GFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVM 289
G+A++G ++ AR+LF+ P +DV +W M+ GY+Q + EA ++ M N+V
Sbjct: 259 GYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKM----PERNEVS 314
Query: 290 IVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGI 349
+++ Y R+ +A+ F++
Sbjct: 315 WNAMLAG-----------------------------------YVQGERMEMAKELFDVMP 339
Query: 350 KDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHG 409
++++WN +I G+ + G I +A+ LF+ M KRD SW+AMI+GY+Q+ AL LF
Sbjct: 340 CRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQ 399
Query: 410 MVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGS 469
M G + N + S A L+ G+ H ++ + A++ MY KCGS
Sbjct: 400 MEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGS 459
Query: 470 INTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVL 529
I A ++F + + + WN +I G + HG + L+ + +++ +K + T + VL
Sbjct: 460 IEEANDLFKEMAGK--DIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVL 517
Query: 530 STCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKAD 589
S C H GLVD G +YF +M Y V P+ +HY CMVDLLGRAG LEDA ++++MP + D
Sbjct: 518 SACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPD 577
Query: 590 VVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKE 649
IWGTLL ASR+HGN E+ E AA + ++P + VLLSN+YA +GRW D +R
Sbjct: 578 AAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVR 637
Query: 650 MRDCGMKRLPGFSGV 664
MRD G+K++PG+S +
Sbjct: 638 MRDKGVKKVPGYSWI 652
>sp|Q9SJZ3|PP169_ARATH Pentatricopeptide repeat-containing protein At2g22410,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E28 PE=2
SV=1
Length = 681
Score = 358 bits (919), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 206/616 (33%), Positives = 333/616 (54%), Gaps = 46/616 (7%)
Query: 60 IQNSLINLYAKCGLISQAKS----MFDSCSTLDPVACNIMIS--GYIRNDRLNDAREVFD 113
+ N L++L KC L+ K M + LDP A + +I+ + L+ + ++
Sbjct: 52 LHNPLLSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILK 111
Query: 114 KTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVI---PNEVTLASVISSSVHLGG 170
S+ I GF++++ +E+ +++ M G P+ T + L
Sbjct: 112 GIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRL 171
Query: 171 IWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSW--NVML 228
M+ G V+KL ++ +VS N +
Sbjct: 172 SSLGHMILGHVLKLRLE---------------------------------LVSHVHNASI 198
Query: 229 NGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDV 288
+ FA G +E AR++F+ P +D+VSW +I+GY ++ +A+ +Y+ M +G+ P+DV
Sbjct: 199 HMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDV 258
Query: 289 MIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELG 348
++ L+S+C G + + + + G + ++ ++ CG I+ AR F+
Sbjct: 259 TMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNL 318
Query: 349 IKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFH 408
K I SW +I+G+ R G+++ +R+LF++M+++DV W+AMI G Q ++ AL LF
Sbjct: 319 EKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQ 378
Query: 409 GMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCG 468
M + KP+EITM+ A + G L G W H Y+ S++LN L +++DMYAKCG
Sbjct: 379 EMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCG 438
Query: 469 SINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGV 528
+I+ A VF+ I+ R + + AII GLA+HGDA+ + ++++ I + ITFIG+
Sbjct: 439 NISEALSVFHGIQTRNSLT--YTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGL 496
Query: 529 LSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKA 588
LS CCH G++ G YF MKS +N+ P LKHY MVDLLGRAG LE+A+ ++ SMPM+A
Sbjct: 497 LSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEA 556
Query: 589 DVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRK 648
D +WG LL R+HGNVE+GE+AAK L L PS VLL +Y +A WEDA R+
Sbjct: 557 DAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARR 616
Query: 649 EMRDCGMKRLPGFSGV 664
M + G++++PG S +
Sbjct: 617 MMNERGVEKIPGCSSI 632
Score = 184 bits (466), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 123/488 (25%), Positives = 230/488 (47%), Gaps = 70/488 (14%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
+ C+ S G I + K LE + + N+ I+++A CG + A+ +FD D
Sbjct: 163 FKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDL 222
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
V+ N +I+GY + +G A+ +A+ V++ M
Sbjct: 223 VSWNCLINGYKK--------------------------IGEAE-----KAIYVYKLMESE 251
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
GV P++VT+ ++SS LG + + + V + + + + L++M+ C + EA
Sbjct: 252 GVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEA 311
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLS 269
R +FD +++R IVSW M++G+A+ GL++++R+LF+ + KDVV W MI G +Q +R
Sbjct: 312 RRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQ 371
Query: 270 EALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATII 329
+AL +++ M P+++ ++ +SAC + A G+ IH I K + +++
Sbjct: 372 DALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLV 431
Query: 330 HFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSA 389
YA CG I+ +A +F+ +Q R+ +++A
Sbjct: 432 DMYAKCGNIS-------------------------------EALSVFHGIQTRNSLTYTA 460
Query: 390 MISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYV--LN 447
+I G A + + A+ F+ M+DAG+ P+EIT + + A G ++ GR +Y +
Sbjct: 461 IIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGR---DYFSQMK 517
Query: 448 NSITLNDNLS--AAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANL 505
+ LN L + ++D+ + G + A + + + W A++ G MHG+ L
Sbjct: 518 SRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESM-PMEADAAVWGALLFGCRMHGNVEL 576
Query: 506 TLKIYSDL 513
K L
Sbjct: 577 GEKAAKKL 584
Score = 117 bits (292), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 89/376 (23%), Positives = 175/376 (46%), Gaps = 70/376 (18%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
++ ++ + CS +++G++ + + ++GL + N+L+++++KCG I +A+ +FD
Sbjct: 257 DVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFD 316
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+ V+ MISGY R L+ +R++FD K V + +MI G Q ++AL +
Sbjct: 317 NLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALAL 376
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLG----GIWECRMLHGLVIKLMIDGFVIISTNLLN 198
F++M+ P+E+T+ +S+ LG GIW +H + K + V + T+L++
Sbjct: 377 FQEMQTSNTKPDEITMIHCLSACSQLGALDVGIW----IHRYIEKYSLSLNVALGTSLVD 432
Query: 199 MYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTM 258
MY C ++ EA S+F ++ RN +++ ++ G A G
Sbjct: 433 MYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHG----------------------- 469
Query: 259 IDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGF 318
S A++ + M+ GIAP+++ + L+SAC H +++ G
Sbjct: 470 --------DASTAISYFNEMIDAGIAPDEITFIGLLSAC-----------CHGGMIQTGR 510
Query: 319 DCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNN 378
D +F R NL + ++ ++ R G++E+A +L +
Sbjct: 511 D----------YFSQMKSRFNL---------NPQLKHYSIMVDLLGRAGLLEEADRLMES 551
Query: 379 MQ-KRDVYSWSAMISG 393
M + D W A++ G
Sbjct: 552 MPMEADAAVWGALLFG 567
>sp|Q9SIT7|PP151_ARATH Pentatricopeptide repeat-containing protein At2g13600
OS=Arabidopsis thaliana GN=PCMP-E76 PE=3 SV=1
Length = 697
Score = 355 bits (912), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 213/626 (34%), Positives = 329/626 (52%), Gaps = 42/626 (6%)
Query: 45 IHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDR 104
+H+ + KSG + FIQN LI+ Y+KCG + + +FD + N +++G +
Sbjct: 42 VHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGF 101
Query: 105 LNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISS 164
L++A +F P + ++ SM+ GFAQ+D EAL F M G + NE + ASV+S+
Sbjct: 102 LDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSA 161
Query: 165 SVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSW 224
L + + +H L+ K V I + L++MY C
Sbjct: 162 CSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKC--------------------- 200
Query: 225 NVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIA 284
G V A+ +F+ + ++VVSW ++I + Q EAL +++ ML +
Sbjct: 201 ----------GNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVE 250
Query: 285 PNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQAT-IIHFYAACGRINLARL 343
P++V + +ISAC A G ++H +VK D I + + YA C RI AR
Sbjct: 251 PDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARF 310
Query: 344 QFE-LGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNM 402
F+ + I++ IA ++I+G+ + AR +F M +R+V SW+A+I+GY QN +
Sbjct: 311 IFDSMPIRNVIAE-TSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEE 369
Query: 403 ALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDN------L 456
AL LF + V P + ++ A A L G AH +VL + +
Sbjct: 370 ALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFV 429
Query: 457 SAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKR 516
++IDMY KCG + + VF + +R WNA+I G A +G N L+++ ++ +
Sbjct: 430 GNSLIDMYVKCGCVEEGYLVFRKMMER--DCVSWNAMIIGFAQNGYGNEALELFREMLES 487
Query: 517 NIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLED 576
K + IT IGVLS C HAG V+ G YF SM + V P HY CMVDLLGRAG LE+
Sbjct: 488 GEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEE 547
Query: 577 AEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYAD 636
A+ +I MPM+ D VIWG+LLAA ++H N+ +G+ A+ L ++PS+ VLLSN+YA+
Sbjct: 548 AKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAE 607
Query: 637 AGRWEDAFSIRKEMRDCGMKRLPGFS 662
G+WED ++RK MR G+ + PG S
Sbjct: 608 LGKWEDVMNVRKSMRKEGVTKQPGCS 633
Score = 220 bits (561), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 150/491 (30%), Positives = 248/491 (50%), Gaps = 63/491 (12%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E + S L CS +++G Q+HSLI KS S+ +I ++L+++Y+KCG ++ A+ +FD
Sbjct: 152 EYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFD 211
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
E+ D+ VS+ S+I F QN EAL+V
Sbjct: 212 ---------------------------EMGDRN----VVSWNSLITCFEQNGPAVEALDV 240
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIK-LMIDGFVIISTNLLNMYC 201
F+ M V P+EVTLASVIS+ L I + +HG V+K + +I+S ++MY
Sbjct: 241 FQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYA 300
Query: 202 VCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDG 261
CS + EAR +FD M RN+++ M++G+A A + AR +F ++ ++VVSW +I G
Sbjct: 301 KCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAG 360
Query: 262 YLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCY 321
Y Q EAL+++ + + + P +++ AC G+Q H ++K GF
Sbjct: 361 YTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGF--- 417
Query: 322 DFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQK 381
+F+ G +D I N+LI +++ G +E+ +F M +
Sbjct: 418 ----------------------KFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMME 455
Query: 382 RDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWA 441
RD SW+AMI G+AQN N ALELF M+++G KP+ ITM+ V A +G ++EGR
Sbjct: 456 RDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHY 515
Query: 442 HEYVLNN--SITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAM 499
+ + L D+ + ++D+ + G + A + + + SV W +++ +
Sbjct: 516 FSSMTRDFGVAPLRDHYT-CMVDLLGRAGFLEEAKSMIEEMPMQPDSV-IWGSLLAACKV 573
Query: 500 HGDANLTLKIY 510
H N+TL Y
Sbjct: 574 H--RNITLGKY 582
>sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein At1g08070
OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1
Length = 741
Score = 351 bits (900), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 202/545 (37%), Positives = 307/545 (56%), Gaps = 37/545 (6%)
Query: 123 YTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVI 182
+ +M G A + AL+++ M LG++PN T V+ S E + +HG V+
Sbjct: 102 WNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVL 161
Query: 183 KLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARE 242
KL D + + T+L++MY L +A +FD+ R++VS+ ++ G+A G +E A++
Sbjct: 162 KLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQK 221
Query: 243 LFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMA 302
LF+ IP KDVVSW MI GY + EAL +++ M+ + P++ +V ++SAC ++ +
Sbjct: 222 LFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGS 281
Query: 303 FGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFE-LGIKDHIASWNALIA 361
G Q+H I GF I +I Y+ CG + A FE L KD + SWN LI
Sbjct: 282 IELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKD-VISWNTLIG 340
Query: 362 GFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEIT 421
G+ + ++ AL LF M+ +G PN++T
Sbjct: 341 GYTHMNLYKE-------------------------------ALLLFQEMLRSGETPNDVT 369
Query: 422 MVSVFCAIASSGTLKEGRWAHEYVLN--NSITLNDNLSAAIIDMYAKCGSINTAFEVFYH 479
M+S+ A A G + GRW H Y+ +T +L ++IDMYAKCG I A +VF
Sbjct: 370 MLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNS 429
Query: 480 IRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVD 539
I + S+S WNA+I G AMHG A+ + ++S + K I+ + ITF+G+LS C H+G++D
Sbjct: 430 ILHK--SLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLD 487
Query: 540 LGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAA 599
LG F++M Y + P L+HYGCM+DLLG +G ++AEE+I M M+ D VIW +LL A
Sbjct: 488 LGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKA 547
Query: 600 SRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLP 659
++HGNVE+GE A++L ++P + S VLLSNIYA AGRW + R + D GMK++P
Sbjct: 548 CKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVP 607
Query: 660 GFSGV 664
G S +
Sbjct: 608 GCSSI 612
Score = 192 bits (488), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 119/391 (30%), Positives = 199/391 (50%), Gaps = 18/391 (4%)
Query: 240 ARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGR 299
A +F+ I +++ W TM G+ AL +Y M+ G+ PN ++ +C +
Sbjct: 87 AISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAK 146
Query: 300 AMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNAL 359
+ AF EG QIH ++K G D ++ ++I Y GR+ A F+ + S+ AL
Sbjct: 147 SKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTAL 206
Query: 360 IAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNE 419
I G+ G IE+A++LF+ + +DV SW+AMISGYA+ ALELF M+ V+P+E
Sbjct: 207 IKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDE 266
Query: 420 ITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYH 479
TMV+V A A SG+++ GR H ++ ++ N + A+ID+Y+KCG + TA +F
Sbjct: 267 STMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFER 326
Query: 480 IRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVD 539
+ + V WN +I G L ++ ++ + N +T + +L C H G +D
Sbjct: 327 LPYK--DVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAID 384
Query: 540 LGERYF-----KSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWG 594
+G R+ K +K V N L+ ++D+ + G +E A +V S+ K+ + W
Sbjct: 385 IG-RWIHVYIDKRLKGVTNAS-SLR--TSLIDMYAKCGDIEAAHQVFNSILHKS-LSSWN 439
Query: 595 TLLAASRIHGNVEVG----ERAAKSLAGLQP 621
++ +HG + R K G+QP
Sbjct: 440 AMIFGFAMHGRADASFDLFSRMRK--IGIQP 468
Score = 181 bits (460), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 114/412 (27%), Positives = 191/412 (46%), Gaps = 64/412 (15%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
L+ C+ A +GQQIH + K G + + ++ SLI++Y + G + A +FD D
Sbjct: 141 LKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDV 200
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
V+ +I GY + +A+++FD+ P+K VS+ +MI G+A+ ++EALE+F+DM
Sbjct: 201 VSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKT 260
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
V P+E T+ +V+S+ G I R +H + + I L+++Y C L A
Sbjct: 261 NVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETA 320
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLS 269
LF+ + ++++SWN ++ G+ L +
Sbjct: 321 CGLFERLPYKDVISWNTLIGGYTHMNLYK------------------------------- 349
Query: 270 EALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVK--AGFDCYDFIQAT 327
EAL +++ ML G PNDV ++ ++ AC A G IH I K G ++ +
Sbjct: 350 EALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTS 409
Query: 328 IIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSW 387
+I YA CG I A F + ++SWNA+I GF +G + + LF+ M+K
Sbjct: 410 LIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRK------ 463
Query: 388 SAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGR 439
G++P++IT V + A + SG L GR
Sbjct: 464 -------------------------IGIQPDDITFVGLLSACSHSGMLDLGR 490
Score = 103 bits (256), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 125/289 (43%), Gaps = 64/289 (22%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E +V+ + C+ ++ G+Q+H I G SN I N+LI+LY+KCG + A +F+
Sbjct: 266 ESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFE 325
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
D ++ N +I GY + ++EAL +
Sbjct: 326 RLPYKDVISWNTLIGGY-------------------------------THMNLYKEALLL 354
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLM--IDGFVIISTNLLNMY 200
F++M G PN+VT+ S++ + HLG I R +H + K + + + T+L++MY
Sbjct: 355 FQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMY 414
Query: 201 CVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMID 260
C + A +F+ + +++ SWN M+ GFA G + + +LF R
Sbjct: 415 AKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSR-------------- 460
Query: 261 GYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQI 309
M GI P+D+ V L+SAC + G I
Sbjct: 461 -----------------MRKIGIQPDDITFVGLLSACSHSGMLDLGRHI 492
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 347 bits (891), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 209/635 (32%), Positives = 321/635 (50%), Gaps = 95/635 (14%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
L+ C + G++IH L+ KSG + F L N+YAKC
Sbjct: 142 LKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKC------------------ 183
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
++N+AR+VFD+ P + VS+ +++ G++QN R ALE+ + M
Sbjct: 184 -------------RQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEE 230
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
+ P+ +T+ SV+ + L I + +HG ++ D V IST L++MY C SL
Sbjct: 231 NLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSL--- 287
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLS 269
E AR+LF+ + ++VVSW +MID Y+Q E
Sbjct: 288 ----------------------------ETARQLFDGMLERNVVSWNSMIDAYVQNENPK 319
Query: 270 EALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATII 329
EA+ +++ ML +G+ P DV ++ + AC D D + I
Sbjct: 320 EAMLIFQKMLDEGVKPTDVSVMGALHACA--------------------DLGDLERGRFI 359
Query: 330 HFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSA 389
H +L ELG+ +++ N+LI+ + + ++ A +F +Q R + SW+A
Sbjct: 360 H-----------KLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNA 408
Query: 390 MISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNS 449
MI G+AQN +P AL F M VKP+ T VSV AIA +W H V+ +
Sbjct: 409 MILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSC 468
Query: 450 ITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKI 509
+ N ++ A++DMYAKCG+I A +F + +R V+ WNA+I G HG L++
Sbjct: 469 LDKNVFVTTALVDMYAKCGAIMIARLIFDMMSER--HVTTWNAMIDGYGTHGFGKAALEL 526
Query: 510 YSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLG 569
+ +++K IK N +TF+ V+S C H+GLV+ G + F MK Y++E + HYG MVDLLG
Sbjct: 527 FEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLG 586
Query: 570 RAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVL 629
RAG+L +A + I MP+K V ++G +L A +IH NV E+AA+ L L P G VL
Sbjct: 587 RAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVL 646
Query: 630 LSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
L+NIY A WE +R M G+++ PG S V
Sbjct: 647 LANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMV 681
Score = 189 bits (481), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 146/605 (24%), Positives = 264/605 (43%), Gaps = 106/605 (17%)
Query: 2 PLDHFHSVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQ 61
P H H F S++ + + YE L CS+ + + +QI L+FK+GL F Q
Sbjct: 18 PSRHRH--FLSERNYIPANVYEHPAALLLERCSS---LKELRQILPLVFKNGLYQEHFFQ 72
Query: 62 NSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCV 121
L++L+ + G + +A +F +P+ + +LN V
Sbjct: 73 TKLVSLFCRYGSVDEAARVF------EPI-----------DSKLN--------------V 101
Query: 122 SYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLV 181
Y +M+ GFA+ +AL+ F MR V P ++ + + +HGL+
Sbjct: 102 LYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLL 161
Query: 182 IK--LMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVEL 239
+K +D F + T L NMY C + EAR +FD M ER++VSWN ++ G+++ G+ +
Sbjct: 162 VKSGFSLDLFAM--TGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARM 219
Query: 240 ARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGR 299
AL M ++M + + P+ + IV ++ A
Sbjct: 220 -------------------------------ALEMVKSMCEENLKPSFITIVSVLPAVSA 248
Query: 300 AMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNAL 359
G +IH +++GFD I ++ YA CG + AR F+ ++ ++ SWN++
Sbjct: 249 LRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSM 308
Query: 360 IAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNE 419
I Y QNE P A+ +F M+D GVKP +
Sbjct: 309 I-------------------------------DAYVQNENPKEAMLIFQKMLDEGVKPTD 337
Query: 420 ITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYH 479
++++ A A G L+ GR+ H+ + + N ++ ++I MY KC ++TA +F
Sbjct: 338 VSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGK 397
Query: 480 IRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVD 539
++ RT + WNA+I G A +G L +S + R +K ++ T++ V++ +
Sbjct: 398 LQSRT--LVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITH 455
Query: 540 LGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAA 599
++ + ++ ++ +VD+ + G + A +I M + V W ++
Sbjct: 456 HA-KWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIA-RLIFDMMSERHVTTWNAMIDG 513
Query: 600 SRIHG 604
HG
Sbjct: 514 YGTHG 518
Score = 171 bits (434), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 123/495 (24%), Positives = 219/495 (44%), Gaps = 95/495 (19%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+ +VS L SA +S G++IH +SG +S I +L+++YAKCG + A+ +FD
Sbjct: 237 ITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDG 296
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
+ V+ N MI Y+ QN+ +EA+ +F
Sbjct: 297 MLERNVVSWNSMIDAYV-------------------------------QNENPKEAMLIF 325
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
+ M GV P +V++ + + LG + R +H L ++L +D V + +L++MYC C
Sbjct: 326 QKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKC 385
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYL 263
+ A S+F +++ R +VSWN M+ GFA+ G
Sbjct: 386 KEVDTAASMFGKLQSRTLVSWNAMILGFAQNG---------------------------- 417
Query: 264 QVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDF 323
R +AL + M + P+ V +I+A IH +++++ D F
Sbjct: 418 ---RPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVF 474
Query: 324 IQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRD 383
+ ++ YA CG I +ARL F++ + H+ +WNA+I G+ +G + A +LF MQK
Sbjct: 475 VTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQK-- 532
Query: 384 VYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG-RWAH 442
+KPN +T +SV A + SG ++ G + +
Sbjct: 533 -----------------------------GTIKPNGVTFLSVISACSHSGLVEAGLKCFY 563
Query: 443 EYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGD 502
N SI L+ + A++D+ + G +N A++ + + +V+ + A++ +H +
Sbjct: 564 MMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVK-PAVNVYGAMLGACQIHKN 622
Query: 503 ANLTLKIYSDLEKRN 517
N K L + N
Sbjct: 623 VNFAEKAAERLFELN 637
Score = 119 bits (297), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 135/299 (45%), Gaps = 73/299 (24%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
+++++ AL C+ + +G+ IH L + GL+ N + NSLI++Y KC + A SMF
Sbjct: 337 DVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFG 396
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+ V+ N MI G+ +N R PI +AL
Sbjct: 397 KLQSRTLVSWNAMILGFAQNGR-----------PI--------------------DALNY 425
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
F MR V P+ T SVI++ L + +HG+V++ +D V ++T L++MY
Sbjct: 426 FSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAK 485
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
C +++ AR +FD M ER++ +WN M++G+ G + A ELFE + GT
Sbjct: 486 CGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQK------GT----- 534
Query: 263 LQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCY 321
I PN V + +ISAC HS +V+AG C+
Sbjct: 535 --------------------IKPNGVTFLSVISACS-----------HSGLVEAGLKCF 562
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 347 bits (890), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 216/645 (33%), Positives = 326/645 (50%), Gaps = 67/645 (10%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
+ C +V G+ H+L +G SN F+ N+L+ +Y++C
Sbjct: 134 FKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRC------------------ 175
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDM-RI 148
L+DAR+VFD+ + VS+ S+I +A+ + ALE+F M
Sbjct: 176 -------------RSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNE 222
Query: 149 LGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVE 208
G P+ +TL +V+ LG + LH + + + + L++MY C + E
Sbjct: 223 FGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDE 282
Query: 209 ARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSK----DVVSWGTMIDGYLQ 264
A ++F M +++VSWN M+ G+++ G E A LFE++ + DVV+W I GY Q
Sbjct: 283 ANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQ 342
Query: 265 VERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFI 324
EAL + R ML GI PN+V ++ ++S C A G +IH +K D
Sbjct: 343 RGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDL---- 398
Query: 325 QATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNM--QKR 382
R N G D N LI + + ++ AR +F+++ ++R
Sbjct: 399 ------------RKN--------GHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKER 438
Query: 383 DVYSWSAMISGYAQNEQPNMALELFHGMV--DAGVKPNEITMVSVFCAIASSGTLKEGRW 440
DV +W+ MI GY+Q+ N ALEL M D +PN T+ A AS L+ G+
Sbjct: 439 DVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQ 498
Query: 441 AHEYVLNNSI-TLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAM 499
H Y L N + +S +IDMYAKCGSI+ A VF ++ + W +++ G M
Sbjct: 499 IHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVT--WTSLMTGYGM 556
Query: 500 HGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLK 559
HG L I+ ++ + KL+ +T + VL C H+G++D G YF MK+V+ V P +
Sbjct: 557 HGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPE 616
Query: 560 HYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGL 619
HY C+VDLLGRAG+L A +I MPM+ V+W L+ RIHG VE+GE AA+ + L
Sbjct: 617 HYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITEL 676
Query: 620 QPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
+H S LLSN+YA+AGRW+D IR MR G+K+ PG S V
Sbjct: 677 ASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWV 721
Score = 223 bits (567), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 169/594 (28%), Positives = 273/594 (45%), Gaps = 65/594 (10%)
Query: 48 LIFKSGLESNTFIQNSLINLYA---------KCGLISQAKSMFDSCSTLDPVACNI---M 95
LI + +S+ +I+ SL + A KC ISQ K + + + N+ +
Sbjct: 6 LIPNAAAKSHQYIKVSLFSTSAPEITPPFIHKCKTISQVKLIHQKLLSFGILTLNLTSHL 65
Query: 96 ISGYIRNDRLNDAREVFDKTPIKCCVSY--TSMIMGFAQNDCWREALEVFRDMRILGVIP 153
IS YI L+ A + + P Y S+I + N C + L +F M L P
Sbjct: 66 ISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTP 125
Query: 154 NEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLF 213
+ T V + + + H L + V + L+ MY C SL +AR +F
Sbjct: 126 DNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVF 185
Query: 214 DEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALT 273
DEM ++VSWN ++ +AK G ++A E+F R+ ++
Sbjct: 186 DEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNE----------------------- 222
Query: 274 MYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYA 333
G P+++ +V+++ C G Q+H V + F+ ++ YA
Sbjct: 223 -------FGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYA 275
Query: 334 ACGRINLARLQFE-LGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ----KRDVYSWS 388
CG ++ A F + +KD + SWNA++AG+ + G EDA +LF MQ K DV +WS
Sbjct: 276 KCGMMDEANTVFSNMSVKD-VVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWS 334
Query: 389 AMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNN 448
A ISGYAQ AL + M+ +G+KPNE+T++SV AS G L G+ H Y +
Sbjct: 335 AAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKY 394
Query: 449 SITLNDN-------LSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHG 501
I L N + +IDMYAKC ++TA +F + + V W +I G + HG
Sbjct: 395 PIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHG 454
Query: 502 DANLTLKIYSDL--EKRNIKLNSITFIGVLSTCCHAGLVDLGER-YFKSMKSVYNVEPDL 558
DAN L++ S++ E + N+ T L C + +G++ + ++++ N P L
Sbjct: 455 DANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVP-L 513
Query: 559 KHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERA 612
C++D+ + G + DA V +M M + V W +L+ +HG GE A
Sbjct: 514 FVSNCLIDMYAKCGSISDARLVFDNM-MAKNEVTWTSLMTGYGMHG---YGEEA 563
Score = 167 bits (422), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 130/497 (26%), Positives = 223/497 (44%), Gaps = 76/497 (15%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+ LV+ L C++ S G+Q+H S + N F+ N L+++YAKCG++ +A ++F +
Sbjct: 230 ITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSN 289
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDK---TPIKC-CVSYTSMIMGFAQNDCWREA 139
S D V+ N M++GY + R DA +F+K IK V++++ I G+AQ EA
Sbjct: 290 MSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEA 349
Query: 140 LEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMID-------GFVII 192
L V R M G+ PNEVTL SV+S +G + + +H IK ID ++
Sbjct: 350 LGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMV 409
Query: 193 STNLLNMYCVCSSLVEARSLFDEM--KERNIVSWNVMLNGFAKAGLVELARELFERIPSK 250
L++MY C + AR++FD + KER++V+W VM+ G+++ G A EL + +
Sbjct: 410 INQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEE 469
Query: 251 DVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIH 310
D + PN I + AC A G QIH
Sbjct: 470 DCQT-----------------------------RPNAFTISCALVACASLAALRIGKQIH 500
Query: 311 SIIVKAGFDCYD-FIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMI 369
+ ++ + F+ +I YA CG I+ ARL F+ + + +W +L+ G+ +G
Sbjct: 501 AYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYG 560
Query: 370 EDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAI 429
E+A +F+ M++ G K + +T++ V A
Sbjct: 561 EEALGIFDEMRR-------------------------------IGFKLDGVTLLVVLYAC 589
Query: 430 ASSGTLKEG-RWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVS 488
+ SG + +G + + ++ A ++D+ + G +N A + + V
Sbjct: 590 SHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVV 649
Query: 489 PWNAIICGLAMHGDANL 505
W A + +HG L
Sbjct: 650 -WVAFLSCCRIHGKVEL 665
Score = 82.4 bits (202), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 110/235 (46%), Gaps = 39/235 (16%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSL-------IFKSGLESNTFIQNSLINLYAKCGLIS 75
E+ L+S L C++ A+ G++IH + K+G + N LI++YAKC +
Sbjct: 365 EVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVD 424
Query: 76 QAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDC 135
A++MFDS S + R+V V++T MI G++Q+
Sbjct: 425 TARAMFDSLSPKE--------------------RDV---------VTWTVMIGGYSQHGD 455
Query: 136 WREALEVFRDM--RILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIIS 193
+ALE+ +M PN T++ + + L + + +H ++ + +
Sbjct: 456 ANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFV 515
Query: 194 TN-LLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERI 247
+N L++MY C S+ +AR +FD M +N V+W ++ G+ G E A +F+ +
Sbjct: 516 SNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEM 570
>sp|Q9LUJ2|PP249_ARATH Pentatricopeptide repeat-containing protein At3g22690
OS=Arabidopsis thaliana GN=PCMP-H56 PE=2 SV=1
Length = 842
Score = 346 bits (888), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 204/638 (31%), Positives = 332/638 (52%), Gaps = 66/638 (10%)
Query: 29 ALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLD 88
L C+ A G QIH LI K G + F+QNSL++ YA+CG
Sbjct: 140 GLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECG---------------- 183
Query: 89 PVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF-RDMR 147
L+ AR+VFD+ + VS+TSMI G+A+ D ++A+++F R +R
Sbjct: 184 ---------------ELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVR 228
Query: 148 ILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLV 207
V PN VT+ VIS+ L + ++ + I+ ++ + L++MY C+++
Sbjct: 229 DEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAID 288
Query: 208 EARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVER 267
A+ LFDE N+ N M + + + GL
Sbjct: 289 VAKRLFDEYGASNLDLCNAMASNYVRQGLTR----------------------------- 319
Query: 268 LSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQAT 327
EAL ++ M+ G+ P+ + ++ IS+C + G H +++ GF+ +D I
Sbjct: 320 --EALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNA 377
Query: 328 IIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSW 387
+I Y C R + A F+ + +WN+++AG++ NG ++ A + F M ++++ SW
Sbjct: 378 LIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSW 437
Query: 388 SAMISGYAQNEQPNMALELFHGM-VDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVL 446
+ +ISG Q A+E+F M GV + +TM+S+ A G L +W + Y+
Sbjct: 438 NTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIE 497
Query: 447 NNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLT 506
N I L+ L ++DM+++CG +A +F + +R VS W A I +AM G+A
Sbjct: 498 KNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNR--DVSAWTAAIGAMAMAGNAERA 555
Query: 507 LKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVD 566
++++ D+ ++ +K + + F+G L+ C H GLV G+ F SM ++ V P+ HYGCMVD
Sbjct: 556 IELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVD 615
Query: 567 LLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPS 626
LLGRAG LE+A ++I MPM+ + VIW +LLAA R+ GNVE+ AA+ + L P S
Sbjct: 616 LLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGS 675
Query: 627 RVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
VLLSN+YA AGRW D +R M++ G+++ PG S +
Sbjct: 676 YVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSI 713
Score = 174 bits (442), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 128/538 (23%), Positives = 237/538 (44%), Gaps = 98/538 (18%)
Query: 103 DRLNDAREVFDKT-PIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASV 161
+ L+ A+EVF+ + C Y S+I G+A + EA+ +F M G+ P++ T
Sbjct: 81 ESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFG 140
Query: 162 ISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNI 221
+S+ +HGL++K+ + + +L++ Y C L AR +FDEM ERN+
Sbjct: 141 LSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNV 200
Query: 222 VSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCD 281
VSW M+ G+A+ + A +LF +R + +
Sbjct: 201 VSWTSMICGYARRDFAKDAVDLF------------------------------FRMVRDE 230
Query: 282 GIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLA 341
+ PN V +V +ISAC + G ++++ I +G + D + + ++ Y C I++A
Sbjct: 231 EVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVA 290
Query: 342 RLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPN 401
+ F+ ++ NA+ + ++R G+ +
Sbjct: 291 KRLFDEYGASNLDLCNAMASNYVRQGLTRE------------------------------ 320
Query: 402 MALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAII 461
AL +F+ M+D+GV+P+ I+M+S + + + G+ H YVL N DN+ A+I
Sbjct: 321 -ALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALI 379
Query: 462 DMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNI--- 518
DMY KC +TAF +F + ++T V WN+I+ G +G+ + + + + ++NI
Sbjct: 380 DMYMKCHRQDTAFRIFDRMSNKT--VVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSW 437
Query: 519 -----------------------------KLNSITFIGVLSTCCHAGLVDLGERYFKSMK 549
+ +T + + S C H G +DL + + ++
Sbjct: 438 NTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIE 497
Query: 550 SVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVE 607
++ D++ +VD+ R G E A + S+ + DV W + A + GN E
Sbjct: 498 K-NGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNR-DVSAWTAAIGAMAMAGNAE 553
Score = 167 bits (422), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 124/484 (25%), Positives = 216/484 (44%), Gaps = 65/484 (13%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+ +V + C+ + G+++++ I SG+E N + ++L+++Y KC I AK +FD
Sbjct: 237 VTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDE 296
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
+ CN M S Y+R G REAL VF
Sbjct: 297 YGASNLDLCNAMASNYVRQ--------------------------GLT-----REALGVF 325
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
M GV P+ +++ S ISS L I + HG V++ + + I L++MY C
Sbjct: 326 NLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKC 385
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYL 263
A +FD M + +V+WN ++ G+ + G V+ A E FE +P K++VSW T+I G +
Sbjct: 386 HRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLV 445
Query: 264 QVERLSEALTMYRAMLC-DGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD 322
Q EA+ ++ +M +G+ + V ++ + SACG A I+ I K G
Sbjct: 446 QGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGI---- 501
Query: 323 FIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKR 382
+L LG L+ F R G E A +FN++ R
Sbjct: 502 -------------------QLDVRLG--------TTLVDMFSRCGDPESAMSIFNSLTNR 534
Query: 383 DVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAH 442
DV +W+A I A A+ELF M++ G+KP+ + V A + G +++G+
Sbjct: 535 DVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIF 594
Query: 443 EYVLN-NSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHG 501
+L + ++ D ++D+ + G + A ++ + V WN+++ + G
Sbjct: 595 YSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDV-IWNSLLAACRVQG 653
Query: 502 DANL 505
+ +
Sbjct: 654 NVEM 657
>sp|Q9SKQ4|PP167_ARATH Pentatricopeptide repeat-containing protein At2g21090
OS=Arabidopsis thaliana GN=PCMP-E48 PE=2 SV=1
Length = 597
Score = 336 bits (861), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 178/473 (37%), Positives = 274/473 (57%), Gaps = 7/473 (1%)
Query: 184 LMIDGF----VIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVEL 239
L I GF ++S +L+ MY C ++A +FD+M RN+ SWN M++G+ K+G++
Sbjct: 72 LKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVR 131
Query: 240 ARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGR 299
AR +F+ +P +DVVSW TM+ GY Q L EAL Y+ GI N+ L++AC +
Sbjct: 132 ARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVK 191
Query: 300 AMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQF-ELGIKDHIASWNA 358
+ Q H ++ AGF + +II YA CG++ A+ F E+ +KD I W
Sbjct: 192 SRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKD-IHIWTT 250
Query: 359 LIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPN 418
LI+G+ + G +E A +LF M +++ SW+A+I+GY + N AL+LF M+ GVKP
Sbjct: 251 LISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPE 310
Query: 419 EITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFY 478
+ T S CA AS +L+ G+ H Y++ ++ N + +++IDMY+K GS+ + VF
Sbjct: 311 QFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFR 370
Query: 479 HIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLV 538
D+ V WN +I LA HG + L++ D+ K ++ N T + +L+ C H+GLV
Sbjct: 371 ICDDKHDCVF-WNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLV 429
Query: 539 DLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLA 598
+ G R+F+SM + + PD +HY C++DLLGRAG ++ I MP + D IW +L
Sbjct: 430 EEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFEPDKHIWNAILG 489
Query: 599 ASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMR 651
RIHGN E+G++AA L L P +LLS+IYAD G+WE +R M+
Sbjct: 490 VCRIHGNEELGKKAADELIKLDPESSAPYILLSSIYADHGKWELVEKLRGVMK 542
Score = 197 bits (502), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 142/539 (26%), Positives = 248/539 (46%), Gaps = 58/539 (10%)
Query: 26 LVSALRYCSAHIAVSQGQQIHSLIFKSGLE-SNTFIQNSLINLYAKCGLISQAKSMFDSC 84
L S L+ C ++ QG+ IH + +G + NT + N LI +Y KCG A +FD
Sbjct: 49 LASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQM 108
Query: 85 STLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFR 144
+ + N M+SGY+++ L AR VFD P + VS+ +M++G+AQ+ EAL ++
Sbjct: 109 HLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYK 168
Query: 145 DMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGF---VIISTNLLNMYC 201
+ R G+ NE + A ++++ V + R HG V ++ GF V++S ++++ Y
Sbjct: 169 EFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQV---LVAGFLSNVVLSCSIIDAYA 225
Query: 202 VCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDG 261
C + A+ FDEM ++I W +++G+AK G +E A +LF +P K+ VSW +I G
Sbjct: 226 KCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAG 285
Query: 262 YLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCY 321
Y++ + AL ++R M+ G+ P + A + G +IH +++
Sbjct: 286 YVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPN 345
Query: 322 DFIQATIIHFYAACGRINLARLQFELGIKDH-IASWNALIAGFIRNGMIEDARQLFNNMQ 380
+ +++I Y+ G + + F + H WN +I+ ++G+
Sbjct: 346 AIVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGL------------ 393
Query: 381 KRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG-R 439
+ AL + M+ V+PN T+V + A + SG ++EG R
Sbjct: 394 -------------------GHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLR 434
Query: 440 WAHEYVLNNSITLNDNLSAAIIDMYAKCGSINT--------AFEVFYHIRDRTTSVSPWN 491
W + + I + A +ID+ + G FE HI WN
Sbjct: 435 WFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFEPDKHI---------WN 485
Query: 492 AIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKS 550
AI+ +HG+ L K +L K + + +S +I + S G +L E+ MK
Sbjct: 486 AILGVCRIHGNEELGKKAADELIKLDPE-SSAPYILLSSIYADHGKWELVEKLRGVMKK 543
Score = 142 bits (359), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 112/424 (26%), Positives = 195/424 (45%), Gaps = 52/424 (12%)
Query: 268 LSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD-FIQA 326
LS+A++ ++ GI ++ L+ CG + +G IH + GF + +
Sbjct: 27 LSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSN 86
Query: 327 TIIHFYAACGR-INLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVY 385
+I Y CG+ I+ ++ ++ +++ + SWN +++G++++GM+ AR +F++M +RDV
Sbjct: 87 HLIGMYMKCGKPIDACKVFDQMHLRN-LYSWNNMVSGYVKSGMLVRARVVFDSMPERDVV 145
Query: 386 SWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYV 445
SW+ M+ GYAQ+ + AL + +G+K NE + + A S L+ R AH V
Sbjct: 146 SWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQV 205
Query: 446 LNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDR-----TTSVS------------ 488
L N LS +IID YAKCG + +A F + + TT +S
Sbjct: 206 LVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAE 265
Query: 489 ------------PWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAG 536
W A+I G G N L ++ + +K TF L C A
Sbjct: 266 KLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCL--CASAS 323
Query: 537 LVDLGERYFKSMKSVY---NVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIW 593
+ L R+ K + NV P+ ++D+ ++G LE +E V R K D V W
Sbjct: 324 IASL--RHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDCVFW 381
Query: 594 GTLLAASRIHGNVEVGERAAKSLAGL-----QPSHGPSRVLL-----SNIYADAGRWEDA 643
T+++A HG +G +A + L + QP+ V+L S + + RW ++
Sbjct: 382 NTMISALAQHG---LGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFES 438
Query: 644 FSIR 647
+++
Sbjct: 439 MTVQ 442
Score = 112 bits (279), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 136/291 (46%), Gaps = 10/291 (3%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E + L C + +Q H + +G SN + S+I+ YAKCG + AK FD
Sbjct: 179 EFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFD 238
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+ D +ISGY + + A ++F + P K VS+T++I G+ + AL++
Sbjct: 239 EMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDL 298
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
FR M LGV P + T +S + +S + + + +HG +I+ + I+ ++L++MY
Sbjct: 299 FRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSK 358
Query: 203 CSSLVEARSLFDEMKER-NIVSWNVMLNGFAKAGLVELAREL------FERIPSKDVVSW 255
SL + +F ++ + V WN M++ A+ GL A + F P++ +
Sbjct: 359 SGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLV- 417
Query: 256 GTMIDGYLQVERLSEALTMYRAMLCD-GIAPNDVMIVDLISACGRAMAFGE 305
+++ + E L + +M GI P+ LI GRA F E
Sbjct: 418 -VILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKE 467
Score = 76.3 bits (186), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 127/311 (40%), Gaps = 37/311 (11%)
Query: 377 NNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLK 436
+N +KR + + +S +A + + A+ + G++ + S+ + +LK
Sbjct: 4 SNPRKRPICVAQSFLSKHATKAELSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLK 63
Query: 437 EGRWAHEYV-LNNSITLNDNLSAAIIDMYAKCGSINTAFEVF--YHIRDRTT-------- 485
+G+W H ++ + N LS +I MY KCG A +VF H+R+ +
Sbjct: 64 QGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGY 123
Query: 486 -------------------SVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFI 526
V WN ++ G A G+ + L Y + + IK N +F
Sbjct: 124 VKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFA 183
Query: 527 GVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPM 586
G+L+ C + + L R V ++ ++D + GQ+E A+ M +
Sbjct: 184 GLLTACVKSRQLQLN-RQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTV 242
Query: 587 KADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGP-SRVLLSNIYADAGRWEDAFS 645
K D+ IW TL++ G++E AA+ L P P S L Y G A
Sbjct: 243 K-DIHIWTTLISGYAKLGDME----AAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALD 297
Query: 646 IRKEMRDCGMK 656
+ ++M G+K
Sbjct: 298 LFRKMIALGVK 308
>sp|Q9LSB8|PP235_ARATH Putative pentatricopeptide repeat-containing protein At3g15930
OS=Arabidopsis thaliana GN=PCMP-E51 PE=3 SV=2
Length = 687
Score = 335 bits (859), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 203/665 (30%), Positives = 338/665 (50%), Gaps = 71/665 (10%)
Query: 1 TPLDHFHSVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFI 60
+ L F ++ S ++DY +S L C Q +Q+HS G+ N
Sbjct: 13 SELSIFKALLMSTITESISNDYS-RFISILGVCKT---TDQFKQLHSQSITRGVAPNPTF 68
Query: 61 QNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCC 120
Q L + CS L G++ + A ++F K P
Sbjct: 69 QKKLFVFW---------------CSRL---------GGHV-----SYAYKLFVKIPEPDV 99
Query: 121 VSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWEC-RMLHG 179
V + +MI G+++ DC E + ++ +M GV P+ T +++ GG C + LH
Sbjct: 100 VVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHC 159
Query: 180 LVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVEL 239
V+K + + + L+ MY +C GL+++
Sbjct: 160 HVVKFGLGSNLYVQNALVKMYSLC-------------------------------GLMDM 188
Query: 240 ARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGR 299
AR +F+R +DV SW MI GY +++ E++ + M + ++P V ++ ++SAC +
Sbjct: 189 ARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSK 248
Query: 300 AMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNAL 359
++H + + + ++ +++ YAACG +++A F + SW ++
Sbjct: 249 VKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSI 308
Query: 360 IAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNE 419
+ G++ G ++ AR F+ M RD SW+ MI GY + N +LE+F M AG+ P+E
Sbjct: 309 VKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDE 368
Query: 420 ITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYH 479
TMVSV A A G+L+ G W Y+ N I + + A+IDMY KCG A +VF+
Sbjct: 369 FTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHD 428
Query: 480 I--RDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGL 537
+ RD+ T W A++ GLA +G +K++ ++ +I+ + IT++GVLS C H+G+
Sbjct: 429 MDQRDKFT----WTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGM 484
Query: 538 VDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLL 597
VD ++F M+S + +EP L HYGCMVD+LGRAG +++A E++R MPM + ++WG LL
Sbjct: 485 VDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALL 544
Query: 598 AASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKR 657
ASR+H + + E AAK + L+P +G LL NIYA RW+D +R+++ D +K+
Sbjct: 545 GASRLHNDEPMAELAAKKILELEPDNGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKK 604
Query: 658 LPGFS 662
PGFS
Sbjct: 605 TPGFS 609
>sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protein At2g29760,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2
SV=1
Length = 738
Score = 335 bits (859), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 184/562 (32%), Positives = 300/562 (53%), Gaps = 35/562 (6%)
Query: 105 LNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDM-RILGVIPNEVTLASVIS 163
L AR+VFD+ P ++ ++I +A ++ F DM PN+ T +I
Sbjct: 80 LEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIK 139
Query: 164 SSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVS 223
++ + + + LHG+ +K + V ++ +L++ Y C L A +F +KE
Sbjct: 140 AAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKE----- 194
Query: 224 WNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGI 283
KDVVSW +MI+G++Q +AL +++ M + +
Sbjct: 195 --------------------------KDVVSWNSMINGFVQKGSPDKALELFKKMESEDV 228
Query: 284 APNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARL 343
+ V +V ++SAC + G Q+ S I + + + ++ Y CG I A+
Sbjct: 229 KASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKR 288
Query: 344 QFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMA 403
F+ + +W ++ G+ + E AR++ N+M ++D+ +W+A+IS Y QN +PN A
Sbjct: 289 LFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEA 348
Query: 404 LELFHGM-VDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIID 462
L +FH + + +K N+IT+VS A A G L+ GRW H Y+ + I +N ++++A+I
Sbjct: 349 LIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIH 408
Query: 463 MYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNS 522
MY+KCG + + EVF + R V W+A+I GLAMHG N + ++ +++ N+K N
Sbjct: 409 MYSKCGDLEKSREVFNSVEKRDVFV--WSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNG 466
Query: 523 ITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIR 582
+TF V C H GLVD E F M+S Y + P+ KHY C+VD+LGR+G LE A + I
Sbjct: 467 VTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIE 526
Query: 583 SMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWED 642
+MP+ +WG LL A +IH N+ + E A L L+P + + VLLSNIYA G+WE+
Sbjct: 527 AMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWEN 586
Query: 643 AFSIRKEMRDCGMKRLPGFSGV 664
+RK MR G+K+ PG S +
Sbjct: 587 VSELRKHMRVTGLKKEPGCSSI 608
Score = 189 bits (479), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 135/485 (27%), Positives = 223/485 (45%), Gaps = 68/485 (14%)
Query: 38 AVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMIS 97
++S GQ +H + KS + S+ F+ NSLI+ Y CG
Sbjct: 146 SLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCG------------------------- 180
Query: 98 GYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVT 157
L+ A +VF K VS+ SMI GF Q +ALE+F+ M V + VT
Sbjct: 181 ------DLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVT 234
Query: 158 LASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMK 217
+ V+S+ + + R + + + ++ + ++ +L+MY C S+ +A+ LFD M+
Sbjct: 235 MVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAME 294
Query: 218 ERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRA 277
E++ V+W ML+G+A + E ARE+ +P KD+V+W +I Y Q + +EAL ++
Sbjct: 295 EKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHE 354
Query: 278 M-LCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACG 336
+ L + N + +V +SAC + A G IHS I K G + + +IH Y+ CG
Sbjct: 355 LQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCG 414
Query: 337 RINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQ 396
+ +R F K + W+A+I G +G
Sbjct: 415 DLEKSREVFNSVEKRDVFVWSAMIGGLAMHG---------------------------CG 447
Query: 397 NEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGR-WAHEYVLNNSITLNDN 455
NE A+++F+ M +A VKPN +T +VFCA + +G + E H+ N I +
Sbjct: 448 NE----AVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEK 503
Query: 456 LSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYS---D 512
A I+D+ + G + A + F S S W A++ +H + NL + +
Sbjct: 504 HYACIVDVLGRSGYLEKAVK-FIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLE 562
Query: 513 LEKRN 517
LE RN
Sbjct: 563 LEPRN 567
Score = 151 bits (382), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 114/461 (24%), Positives = 197/461 (42%), Gaps = 76/461 (16%)
Query: 231 FAKAGL-----VELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDG-IA 284
FA A L +E AR++F+ IP + +W T+I Y ++ + M+ +
Sbjct: 69 FAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCY 128
Query: 285 PNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQ 344
PN LI A + G +H + VK+ F+ ++IH Y +CG ++ A
Sbjct: 129 PNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKV 188
Query: 345 FELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMAL 404
F + + SWN++I GF++ G + A +LF M+ D
Sbjct: 189 FTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESED--------------------- 227
Query: 405 ELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMY 464
VK + +TMV V A A L+ GR Y+ N + +N L+ A++DMY
Sbjct: 228 ----------VKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMY 277
Query: 465 AKCGSINTAFEVFYHIRDR-----------------------------TTSVSPWNAIIC 495
KCGSI A +F + ++ + WNA+I
Sbjct: 278 TKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALIS 337
Query: 496 GLAMHGDANLTLKIYSDLE-KRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNV 554
+G N L ++ +L+ ++N+KLN IT + LS C G ++LG R+ S + +
Sbjct: 338 AYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELG-RWIHSYIKKHGI 396
Query: 555 EPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAK 614
+ ++ + + G LE + EV S+ K DV +W ++ +HG G A
Sbjct: 397 RMNFHVTSALIHMYSKCGDLEKSREVFNSVE-KRDVFVWSAMIGGLAMHG---CGNEAVD 452
Query: 615 SLAGLQPSH-GPSRVLLSNIY---ADAGRWEDAFSIRKEMR 651
+Q ++ P+ V +N++ + G ++A S+ +M
Sbjct: 453 MFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQME 493
Score = 118 bits (296), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 150/298 (50%), Gaps = 12/298 (4%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+ +V L C+ + G+Q+ S I ++ + N + N+++++Y KCG I AK +FD+
Sbjct: 233 VTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDA 292
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
D V M+ GY ++ AREV + P K V++ ++I + QN EAL VF
Sbjct: 293 MEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVF 352
Query: 144 RDMRILGVIP-NEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
++++ + N++TL S +S+ +G + R +H + K I +++ L++MY
Sbjct: 353 HELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSK 412
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
C L ++R +F+ +++R++ W+ M+ G A G A ++F ++ +V G
Sbjct: 413 CGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNV 472
Query: 263 L----QVERLSEALTMYRAMLCD-GIAPND---VMIVDLISACG---RAMAFGEGLQI 309
+ EA +++ M + GI P + IVD++ G +A+ F E + I
Sbjct: 473 FCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPI 530
Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 75/155 (48%), Gaps = 31/155 (20%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
++ LVS L C+ A+ G+ IHS I K G+ N + ++LI++Y+KCG + +++ +F+
Sbjct: 365 QITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFN 424
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
S + R+VF +++MI G A + C EA+++
Sbjct: 425 SV----------------------EKRDVF---------VWSAMIGGLAMHGCGNEAVDM 453
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRML 177
F M+ V PN VT +V + H G + E L
Sbjct: 454 FYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESL 488
>sp|Q9C866|PPR65_ARATH Pentatricopeptide repeat-containing protein At1g31430
OS=Arabidopsis thaliana GN=PCMP-E55 PE=2 SV=1
Length = 570
Score = 333 bits (854), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 176/546 (32%), Positives = 304/546 (55%), Gaps = 38/546 (6%)
Query: 123 YTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVI 182
Y M+ A + + L +F ++R G+ P+ TL V+ S L + E +HG +
Sbjct: 14 YNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGYAV 73
Query: 183 KLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARE 242
K ++ +S +L+ MY A G +E+ +
Sbjct: 74 KAGLEFDSYVSNSLMGMY-------------------------------ASLGKIEITHK 102
Query: 243 LFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDG-IAPNDVMIVDLISACGRAM 301
+F+ +P +DVVSW +I Y+ R +A+ +++ M + + ++ IV +SAC
Sbjct: 103 VFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALK 162
Query: 302 AFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIA 361
G +I+ +V F+ I ++ + CG ++ AR F+ ++ W +++
Sbjct: 163 NLEIGERIYRFVVTE-FEMSVRIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVF 221
Query: 362 GFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEIT 421
G++ G I++AR LF +DV W+AM++GY Q + + ALELF M AG++P+
Sbjct: 222 GYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFV 281
Query: 422 MVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIR 481
+VS+ A +G L++G+W H Y+ N +T++ + A++DMYAKCG I TA EVFY I+
Sbjct: 282 LVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIK 341
Query: 482 DRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLG 541
+R T + W ++I GLAM+G + L +Y ++E ++L++ITF+ VL+ C H G V G
Sbjct: 342 ERDT--ASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEG 399
Query: 542 ERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKAD---VVIWGTLLA 598
+ F SM +NV+P +H C++DLL RAG L++AEE+I M ++D V ++ +LL+
Sbjct: 400 RKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKMRGESDETLVPVYCSLLS 459
Query: 599 ASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRL 658
A+R +GNV++ ER A+ L ++ S + LL+++YA A RWED ++R++M+D G+++
Sbjct: 460 AARNYGNVKIAERVAEKLEKVEVSDSSAHTLLASVYASANRWEDVTNVRRKMKDLGIRKF 519
Query: 659 PGFSGV 664
PG S +
Sbjct: 520 PGCSSI 525
Score = 182 bits (462), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 131/497 (26%), Positives = 227/497 (45%), Gaps = 85/497 (17%)
Query: 39 VSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISG 98
V +G+++H K+GLE ++++ NSL+ +YA G
Sbjct: 62 VIEGEKVHGYAVKAGLEFDSYVSNSLMGMYASLG-------------------------- 95
Query: 99 YIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIP-NEVT 157
++ +VFD+ P + VS+ +I + N + +A+ VF+ M + +E T
Sbjct: 96 -----KIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEGT 150
Query: 158 LASVISSSVHLGGIWECRMLHGLVIKLMIDGFVI--------ISTNLLNMYCVCSSLVEA 209
+ S +S+ C L L I I FV+ I L++M+C C L +A
Sbjct: 151 IVSTLSA---------CSALKNLEIGERIYRFVVTEFEMSVRIGNALVDMFCKCGCLDKA 201
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLS 269
R++FD M+++N+ W M+ G+ G ++ AR LFER P KDVV W M++GY+Q R
Sbjct: 202 RAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFD 261
Query: 270 EALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATII 329
EAL ++R M GI P++ ++V L++ C + A +G IH I + + ++
Sbjct: 262 EALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALV 321
Query: 330 HFYAACGRINLA-RLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWS 388
YA CG I A + +E+ +D ASW +LI G NGM
Sbjct: 322 DMYAKCGCIETALEVFYEIKERD-TASWTSLIYGLAMNGM-------------------- 360
Query: 389 AMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWA-HEYVLN 447
AL+L++ M + GV+ + IT V+V A G + EGR H
Sbjct: 361 -----------SGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTER 409
Query: 448 NSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRT--TSVSPWNAIICGLAMHGDANL 505
+++ + +ID+ + G ++ A E+ +R + T V + +++ +G+ +
Sbjct: 410 HNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKI 469
Query: 506 TLKIYSDLEKRNIKLNS 522
++ LEK + +S
Sbjct: 470 AERVAEKLEKVEVSDSS 486
Score = 130 bits (327), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 135/233 (57%), Gaps = 3/233 (1%)
Query: 12 SQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKC 71
SQ++NL+ E +VS L CSA + G++I+ + + E + I N+L++++ KC
Sbjct: 139 SQESNLKFD--EGTIVSTLSACSALKNLEIGERIYRFVV-TEFEMSVRIGNALVDMFCKC 195
Query: 72 GLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFA 131
G + +A+++FDS + M+ GY+ R+++AR +F+++P+K V +T+M+ G+
Sbjct: 196 GCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYV 255
Query: 132 QNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVI 191
Q + + EALE+FR M+ G+ P+ L S+++ G + + + +HG + + + +
Sbjct: 256 QFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKV 315
Query: 192 ISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELF 244
+ T L++MY C + A +F E+KER+ SW ++ G A G+ A +L+
Sbjct: 316 VGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLY 368
Score = 93.6 bits (231), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/387 (19%), Positives = 162/387 (41%), Gaps = 62/387 (16%)
Query: 247 IPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEG 306
+ + ++ + M+ + ++ L ++ + G+ P++ + ++ + GR EG
Sbjct: 6 LQTPSLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEG 65
Query: 307 LQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRN 366
++H VKAG + ++ +++ YA+ G+I + F+ + + SWN LI+ ++ N
Sbjct: 66 EKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGN 125
Query: 367 GMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVF 426
G EDA +F M + ++ +K +E T+VS
Sbjct: 126 GRFEDAIGVFKRMSQ------------------------------ESNLKFDEGTIVSTL 155
Query: 427 CAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTS 486
A ++ L+ G + +V+ ++ + A++DM+ KCG ++ A VF +RD+
Sbjct: 156 SACSALKNLEIGERIYRFVV-TEFEMSVRIGNALVDMFCKCGCLDKARAVFDSMRDKNVK 214
Query: 487 V-----------------------SP------WNAIICGLAMHGDANLTLKIYSDLEKRN 517
SP W A++ G + L+++ ++
Sbjct: 215 CWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAG 274
Query: 518 IKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDA 577
I+ ++ + +L+ C G ++ G ++ + V D +VD+ + G +E A
Sbjct: 275 IRPDNFVLVSLLTGCAQTGALEQG-KWIHGYINENRVTVDKVVGTALVDMYAKCGCIETA 333
Query: 578 EEVIRSMPMKADVVIWGTLLAASRIHG 604
EV + + D W +L+ ++G
Sbjct: 334 LEVFYEIKER-DTASWTSLIYGLAMNG 359
Score = 40.8 bits (94), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 65/136 (47%), Gaps = 8/136 (5%)
Query: 24 LALVSALRYCSAHIAVSQGQQI-HSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
+ V+ L C+ V++G++I HS+ + ++ + + LI+L + GL+ +A+ + D
Sbjct: 381 ITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELID 440
Query: 83 -----SCSTLDPVACNIMISG--YIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDC 135
S TL PV C+++ + Y E +K + ++T + +A +
Sbjct: 441 KMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVSDSSAHTLLASVYASANR 500
Query: 136 WREALEVFRDMRILGV 151
W + V R M+ LG+
Sbjct: 501 WEDVTNVRRKMKDLGI 516
>sp|Q9C8L6|PPR80_ARATH Pentatricopeptide repeat-containing protein At1g53600,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E63 PE=2
SV=2
Length = 717
Score = 331 bits (849), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 212/673 (31%), Positives = 343/673 (50%), Gaps = 51/673 (7%)
Query: 33 CSAHIAVSQGQQIHSLIFKSGLESNT-----FIQNSLINLYAKCGLISQAKSMFDSCSTL 87
C++ +AVS + I ++ LE+ T F NS I+ +A+ G + +A+++F S
Sbjct: 21 CNSTLAVSNHEPITQKT-RNFLETTTTSTAIFQCNSQISKHARNGNLQEAEAIFRQMSNR 79
Query: 88 DPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDC-WREALEVFRDM 146
V+ MIS Y N +++ A +VFD+ P++ SY +MI +N C +A E+F D
Sbjct: 80 SIVSWIAMISAYAENGKMSKAWQVFDEMPVRVTTSYNAMITAMIKNKCDLGKAYELFCD- 138
Query: 147 RILGVIP--NEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCS 204
IP N V+ A++I+ V G E L+ D + S LL+ Y
Sbjct: 139 -----IPEKNAVSYATMITGFVRAGRFDEAEFLYAETPVKFRDS--VASNVLLSGYLRAG 191
Query: 205 SLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQ 264
EA +F M + +VS + M++G+ K G + AR LF+R+ ++V++W MIDGY +
Sbjct: 192 KWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFK 251
Query: 265 VERLSEALTMYRAMLCDG-IAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDF 323
+ ++ M +G + N + + AC + + EG QIH ++ + + F
Sbjct: 252 AGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLF 311
Query: 324 IQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRD 383
+ +++ Y+ G + A+ F + SWN+LI G ++ I +A +LF M +D
Sbjct: 312 LGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPGKD 371
Query: 384 VYSWSAMISGYAQNEQPNMALELF-------------------------------HGMVD 412
+ SW+ MI G++ + + +ELF H M+
Sbjct: 372 MVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQ 431
Query: 413 AGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINT 472
V PN T SV A AS L EG H V+ +I + ++ +++ MY KCG+ N
Sbjct: 432 KEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTND 491
Query: 473 AFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTC 532
A+++F I + ++ +N +I G + +G LK++S LE + N +TF+ +LS C
Sbjct: 492 AYKIFSCISE--PNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSAC 549
Query: 533 CHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVI 592
H G VDLG +YFKSMKS YN+EP HY CMVDLLGR+G L+DA +I +MP K +
Sbjct: 550 VHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDLLGRSGLLDDASNLISTMPCKPHSGV 609
Query: 593 WGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRD 652
WG+LL+AS+ H V++ E AAK L L+P V+LS +Y+ G+ D I +
Sbjct: 610 WGSLLSASKTHLRVDLAELAAKKLIELEPDSATPYVVLSQLYSIIGKNRDCDRIMNIKKS 669
Query: 653 CGMKRLPGFSGVV 665
+K+ PG S ++
Sbjct: 670 KRIKKDPGSSWII 682
Score = 128 bits (322), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 106/423 (25%), Positives = 189/423 (44%), Gaps = 95/423 (22%)
Query: 13 QKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCG 72
Q+ +++ + LA++ + C + +G QIH L+ + LE + F+ NSL+++Y+K G
Sbjct: 267 QEGDVKVNSNTLAVM--FKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLG 324
Query: 73 LISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFA- 131
+ +AK++F D V+ N +I+G ++ ++++A E+F+K P K VS+T MI GF+
Sbjct: 325 YMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSG 384
Query: 132 ------------------------------QNDCWREALEVFRDMRILGVIPNEVTLASV 161
N + EAL F M V PN T +SV
Sbjct: 385 KGEISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSV 444
Query: 162 ISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNI 221
+S++ L + E +HG V+K+ I + + +L++MYC C + +A +F + E NI
Sbjct: 445 LSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNI 504
Query: 222 VSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCD 281
VS+N M++G++ G + A +LF + S
Sbjct: 505 VSYNTMISGYSYNGFGKKALKLFSMLES-------------------------------S 533
Query: 282 GIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLA 341
G PN V + L+SAC +H V G+ + ++++
Sbjct: 534 GKEPNGVTFLALLSAC-----------VHVGYVDLGWKYFKSMKSS-------------- 568
Query: 342 RLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ-KRDVYSWSAMISGYAQNEQP 400
E G DH A L+ R+G+++DA L + M K W +++S + +
Sbjct: 569 -YNIEPG-PDHYACMVDLLG---RSGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRV 623
Query: 401 NMA 403
++A
Sbjct: 624 DLA 626
>sp|Q9SS83|PP220_ARATH Pentatricopeptide repeat-containing protein At3g09040,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E88 PE=2
SV=1
Length = 1028
Score = 325 bits (834), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 203/657 (30%), Positives = 338/657 (51%), Gaps = 100/657 (15%)
Query: 9 VFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLY 68
+F K++ N D + S L C+A + G Q HS+I K L N F+ N+L+++Y
Sbjct: 415 LFMDMKSSGYNID-DFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMY 473
Query: 69 AKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIM 128
AKCG L DAR++F++ + V++ ++I
Sbjct: 474 AKCGA-------------------------------LEDARQIFERMCDRDNVTWNTIIG 502
Query: 129 GFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDG 188
+ Q++ EA ++F+ M + G++ + LAS + + H+ G+++ + +H L +K +D
Sbjct: 503 SYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDR 562
Query: 189 FVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIP 248
+ ++L++MY C G+++ AR++F +P
Sbjct: 563 DLHTGSSLIDMYSKC-------------------------------GIIKDARKVFSSLP 591
Query: 249 SKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQ 308
VVS +I GY Q L EA+ +++ ML G+ P+++ ++ AC + + G Q
Sbjct: 592 EWSVVSMNALIAGYSQ-NNLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQ 650
Query: 309 IHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGM 368
H I K GF ++ G LGI +L+ ++ +
Sbjct: 651 FHGQITKRGF--------------SSEGEY--------LGI--------SLLGMYMNSRG 680
Query: 369 IEDARQLFNNMQK-RDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVF- 426
+ +A LF+ + + + W+ M+SG++QN AL+ + M GV P++ T V+V
Sbjct: 681 MTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLR 740
Query: 427 -CAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTT 485
C++ SS L+EGR H + + + L++ S +IDMYAKCG + + +VF +R R+
Sbjct: 741 VCSVLSS--LREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSN 798
Query: 486 SVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYF 545
VS WN++I G A +G A LKI+ + + +I + ITF+GVL+ C HAG V G + F
Sbjct: 799 VVS-WNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIF 857
Query: 546 KSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGN 605
+ M Y +E + H CMVDLLGR G L++A++ I + +K D +W +LL A RIHG+
Sbjct: 858 EMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGD 917
Query: 606 VEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
GE +A+ L L+P + + VLLSNIYA G WE A ++RK MRD G+K++PG+S
Sbjct: 918 DIRGEISAEKLIELEPQNSSAYVLLSNIYASQGCWEKANALRKVMRDRGVKKVPGYS 974
Score = 165 bits (417), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 168/729 (23%), Positives = 288/729 (39%), Gaps = 152/729 (20%)
Query: 3 LDHFHSVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQN 62
L F S+F +Q + + + ++V L C+ V G+QIH + K GLE N++
Sbjct: 145 LRSFVSLFENQ---IFPNKFTFSIV--LSTCARETNVEFGRQIHCSMIKMGLERNSYCGG 199
Query: 63 SLINLYAKCGLISQAKSMF-----------------------------------DSCSTL 87
+L+++YAKC IS A+ +F D
Sbjct: 200 ALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRP 259
Query: 88 DPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMR 147
D +A +I+ YIR +L DAR +F + V++ MI G + C A+E F +MR
Sbjct: 260 DHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMR 319
Query: 148 ILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLV 207
V TL SV+S+ + + ++H IKL + + + ++L++MY C +
Sbjct: 320 KSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKME 379
Query: 208 EARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVER 267
A +F+ ++E+N V WN M+ G+A G ELF D+ S G ID
Sbjct: 380 AAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELF-----MDMKSSGYNID------- 427
Query: 268 LSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQAT 327
D L+S C + G Q HSII+K F+
Sbjct: 428 -------------------DFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNA 468
Query: 328 IIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ------- 380
++ YA CG + AR FE +WN +I ++++ +A LF M
Sbjct: 469 LVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSD 528
Query: 381 --------------------------------KRDVYSWSAMISGYAQ------------ 396
RD+++ S++I Y++
Sbjct: 529 GACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFS 588
Query: 397 ----------------NEQPNM--ALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG 438
Q N+ A+ LF M+ GV P+EIT ++ A +L G
Sbjct: 589 SLPEWSVVSMNALIAGYSQNNLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLG 648
Query: 439 RWAHEYVLNNSITLN-DNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGL 497
H + + + L +++ MY + A +F + S+ W ++ G
Sbjct: 649 TQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSEL-SSPKSIVLWTGMMSGH 707
Query: 498 AMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGE-RYFKSMKSVYNVEP 556
+ +G LK Y ++ + + TF+ VL C + L L E R S+ ++++
Sbjct: 708 SQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVC--SVLSSLREGRAIHSL--IFHLAH 763
Query: 557 DLKHY--GCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAK 614
DL ++D+ + G ++ + +V M +++VV W +L+ +G E A K
Sbjct: 764 DLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNG---YAEDALK 820
Query: 615 SLAGLQPSH 623
++ SH
Sbjct: 821 IFDSMRQSH 829
Score = 162 bits (411), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 131/558 (23%), Positives = 256/558 (45%), Gaps = 49/558 (8%)
Query: 37 IAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMI 96
+A+ G+ +HS G++S + N++++LYAKC +S A+ FD D A N M+
Sbjct: 74 LALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLEK-DVTAWNSML 132
Query: 97 SGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEV 156
S Y + P K S+ S+ +N + PN+
Sbjct: 133 SMYSSIGK-----------PGKVLRSFVSLF----ENQ----------------IFPNKF 161
Query: 157 TLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEM 216
T + V+S+ + R +H +IK+ ++ L++MY C + +AR +F+ +
Sbjct: 162 TFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWI 221
Query: 217 KERNIVSWNVMLNGFAKAGLVELARELFERIPSK----DVVSWGTMIDGYLQVERLSEAL 272
+ N V W + +G+ KAGL E A +FER+ + D +++ T+I+ Y+++ +L +A
Sbjct: 222 VDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDAR 281
Query: 273 TMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFY 332
++ M + +VMI S G+ ++ + K+ +++
Sbjct: 282 LLFGEMSSPDVVAWNVMI----SGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAI 337
Query: 333 AACGRINLARL----QFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWS 388
++L + +LG+ +I ++L++ + + +E A ++F +++++ W+
Sbjct: 338 GIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWN 397
Query: 389 AMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNN 448
AMI GYA N + + +ELF M +G ++ T S+ A+S L+ G H ++
Sbjct: 398 AMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKK 457
Query: 449 SITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLK 508
+ N + A++DMYAKCG++ A ++F + DR WN II + +
Sbjct: 458 KLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVT--WNTIIGSYVQDENESEAFD 515
Query: 509 IYSDLEKRNIKLNSITFIGVLSTCCHA-GLVDLGERYFKSMKSVYNVEPDLKHYGCMVDL 567
++ + I + L C H GL + + S+K ++ DL ++D+
Sbjct: 516 LFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKC--GLDRDLHTGSSLIDM 573
Query: 568 LGRAGQLEDAEEVIRSMP 585
+ G ++DA +V S+P
Sbjct: 574 YSKCGIIKDARKVFSSLP 591
Score = 81.6 bits (200), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/313 (22%), Positives = 125/313 (39%), Gaps = 42/313 (13%)
Query: 300 AMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNAL 359
A+A G +HS + G D + I+ YA C +++ A QF+
Sbjct: 73 ALALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDF------------ 120
Query: 360 IAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNE 419
++DV +W++M+S Y+ +P L F + + + PN+
Sbjct: 121 --------------------LEKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNK 160
Query: 420 ITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYH 479
T V A ++ GR H ++ + N A++DMYAKC I+ A VF
Sbjct: 161 FTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEW 220
Query: 480 IRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVD 539
I D T W + G G + ++ + + + + F+ V++T G +
Sbjct: 221 IVDPNTVC--WTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLK 278
Query: 540 LGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEV---IRSMPMKADVVIWGTL 596
F M S PD+ + M+ G+ G A E +R +K+ G++
Sbjct: 279 DARLLFGEMSS-----PDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSV 333
Query: 597 LAASRIHGNVEVG 609
L+A I N+++G
Sbjct: 334 LSAIGIVANLDLG 346
>sp|O23337|PP311_ARATH Pentatricopeptide repeat-containing protein At4g14820
OS=Arabidopsis thaliana GN=PCMP-H3 PE=2 SV=1
Length = 722
Score = 325 bits (832), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 169/531 (31%), Positives = 303/531 (57%), Gaps = 39/531 (7%)
Query: 137 REALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKL--MIDGFVIIST 194
R + ++ +R +G ++ + ++ + + ++E LHG+ K+ + D FV T
Sbjct: 93 RATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGVAFKIATLCDPFV--ET 150
Query: 195 NLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVS 254
++MY C G + AR +F+ + +DVV+
Sbjct: 151 GFMDMYASC-------------------------------GRINYARNVFDEMSHRDVVT 179
Query: 255 WGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIV 314
W TMI+ Y + + EA ++ M + P+++++ +++SACGR I+ ++
Sbjct: 180 WNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLI 239
Query: 315 KAGFDCYDFIQATIIHFYAACGRINLARLQF-ELGIKDHIASWNALIAGFIRNGMIEDAR 373
+ + ++ YA G +++AR F ++ +++ S A+++G+ + G ++DA+
Sbjct: 240 ENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVS-TAMVSGYSKCGRLDDAQ 298
Query: 374 QLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSG 433
+F+ +K+D+ W+ MIS Y +++ P AL +F M +G+KP+ ++M SV A A+ G
Sbjct: 299 VIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLG 358
Query: 434 TLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAI 493
L + +W H + N + +++ A+I+MYAKCG ++ +VF + R +V W+++
Sbjct: 359 ILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRR--NVVSWSSM 416
Query: 494 ICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYN 553
I L+MHG+A+ L +++ +++ N++ N +TF+GVL C H+GLV+ G++ F SM YN
Sbjct: 417 INALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYN 476
Query: 554 VEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAA 613
+ P L+HYGCMVDL GRA L +A EVI SMP+ ++VVIWG+L++A RIHG +E+G+ AA
Sbjct: 477 ITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAA 536
Query: 614 KSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
K + L+P H + VL+SNIYA RWED +IR+ M + + + G S +
Sbjct: 537 KRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRI 587
Score = 167 bits (423), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 134/568 (23%), Positives = 246/568 (43%), Gaps = 105/568 (18%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
+ + + L+ S A+ +G ++H + FK + F++ +++YA CG
Sbjct: 111 QFSFLPILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCG---------- 160
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
R+N AR VFD+ + V++ +MI + + EA ++
Sbjct: 161 ---------------------RINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKL 199
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
F +M+ V+P+E+ L +++S+ G + R ++ +I+ + + T L+ MY
Sbjct: 200 FEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAG 259
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
+ AR F +M RN+ M++G++K G ++ A+ +F++ KD+V W TMI Y
Sbjct: 260 AGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAY 319
Query: 263 LQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD 322
++ + EAL ++ M C GI P+ V + +ISAC + +HS I G +
Sbjct: 320 VESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESEL 379
Query: 323 FIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKR 382
I +I+ YA CG ++ R FE + ++ SW+++I +G DA LF M++
Sbjct: 380 SINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQE 439
Query: 383 DVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAH 442
+ V+PNE+T V V + SG ++EG+
Sbjct: 440 N-------------------------------VEPNEVTFVGVLYGCSHSGLVEEGK--- 465
Query: 443 EYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGD 502
+ A++ D Y +I E + C + + G
Sbjct: 466 ------------KIFASMTDEY----NITPKLEHYG----------------CMVDLFGR 493
Query: 503 ANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYG 562
ANL + +E + N + + ++S C G ++LG+ + K + +EPD H G
Sbjct: 494 ANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKF---AAKRILELEPD--HDG 548
Query: 563 CMV---DLLGRAGQLEDAEEVIRSMPMK 587
+V ++ R + ED + R M K
Sbjct: 549 ALVLMSNIYAREQRWEDVRNIRRVMEEK 576
Score = 125 bits (315), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 97/372 (26%), Positives = 181/372 (48%), Gaps = 11/372 (2%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E+ L + + C + + I+ + ++ + +T + +L+ +YA G + A+ F
Sbjct: 212 EMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFR 271
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
S + M+SGY + RL+DA+ +FD+T K V +T+MI + ++D +EAL V
Sbjct: 272 KMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRV 331
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
F +M G+ P+ V++ SVIS+ +LG + + + +H + ++ + I+ L+NMY
Sbjct: 332 FEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAK 391
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDV----VSWGTM 258
C L R +F++M RN+VSW+ M+N + G A LF R+ ++V V++ +
Sbjct: 392 CGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGV 451
Query: 259 IDGYLQVERLSEALTMYRAMLCD-GIAPNDVMIVDLISACGRAMAFGEGLQ-IHSIIVKA 316
+ G + E ++ +M + I P ++ GRA E L+ I S+ V +
Sbjct: 452 LYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVAS 511
Query: 317 GFDCY-DFIQATIIHFYAACGRINLAR-LQFELGIKDHIASWNALIAGFIRNGMIEDARQ 374
+ + A IH G+ R L+ E DH + + + R ED R
Sbjct: 512 NVVIWGSLMSACRIHGELELGKFAAKRILELE---PDHDGALVLMSNIYAREQRWEDVRN 568
Query: 375 LFNNMQKRDVYS 386
+ M++++V+
Sbjct: 569 IRRVMEEKNVFK 580
Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/248 (20%), Positives = 98/248 (39%), Gaps = 43/248 (17%)
Query: 387 WSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVL 446
++ + +++ +P + + + G + ++ + + + A++ L EG H
Sbjct: 79 FNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGVAF 138
Query: 447 NNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLT 506
+ + + +DMYA CG IN A VF + R V WN +I G +
Sbjct: 139 KIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHR--DVVTWNTMIERYCRFGLVDEA 196
Query: 507 LKIYSDLEKRNIKLNSITFIGVLSTCCH-------------------------------- 534
K++ +++ N+ + + ++S C
Sbjct: 197 FKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTM 256
Query: 535 ---AGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVV 591
AG +D+ +F+ M SV N L MV + G+L+DA +VI K D+V
Sbjct: 257 YAGAGCMDMAREFFRKM-SVRN----LFVSTAMVSGYSKCGRLDDA-QVIFDQTEKKDLV 310
Query: 592 IWGTLLAA 599
W T+++A
Sbjct: 311 CWTTMISA 318
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 324 bits (831), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 198/627 (31%), Positives = 323/627 (51%), Gaps = 107/627 (17%)
Query: 41 QGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYI 100
+G Q+H+++ K+GL+ + NSLINLY KCG + +A
Sbjct: 212 RGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKA----------------------- 248
Query: 101 RNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLAS 160
R +FDKT +K V++ SMI G+A N EAL +F MR+ V +E + AS
Sbjct: 249 --------RILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFAS 300
Query: 161 VISSSVHLGGIWECRMLHGLVIKLMIDGFVI---ISTNLLNMYCVCSSLVEARSLFDEMK 217
VI +L + LH V+K GF+ I T L+ Y C+++++A LF E+
Sbjct: 301 VIKLCANLKELRFTEQLHCSVVKY---GFLFDQNIRTALMVAYSKCTAMLDALRLFKEI- 356
Query: 218 ERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRA 277
G V +VVSW MI G+LQ + EA+ ++
Sbjct: 357 -----------------GCV------------GNVVSWTAMISGFLQNDGKEEAVDLFSE 387
Query: 278 MLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGR 337
M G+ PN+ +++A + ++H+ +VK ++ +
Sbjct: 388 MKRKGVRPNEFTYSVILTA----LPVISPSEVHAQVVKTNYERSSTVG------------ 431
Query: 338 INLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQN 397
AL+ +++ G +E+A ++F+ + +D+ +WSAM++GYAQ
Sbjct: 432 -------------------TALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQT 472
Query: 398 EQPNMALELFHGMVDAGVKPNEITMVSVF--CAIASSGTLKEGRWAHEYVLNNSITLNDN 455
+ A+++F + G+KPNE T S+ CA A++ ++ +G+ H + + + + +
Sbjct: 473 GETEAAIKMFGELTKGGIKPNEFTFSSILNVCA-ATNASMGQGKQFHGFAIKSRLDSSLC 531
Query: 456 LSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEK 515
+S+A++ MYAK G+I +A EVF R R + WN++I G A HG A L ++ +++K
Sbjct: 532 VSSALLTMYAKKGNIESAEEVFK--RQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKK 589
Query: 516 RNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLE 575
R +K++ +TFIGV + C HAGLV+ GE+YF M + P +H CMVDL RAGQLE
Sbjct: 590 RKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLE 649
Query: 576 DAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYA 635
A +VI +MP A IW T+LAA R+H E+G AA+ + ++P + VLLSN+YA
Sbjct: 650 KAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYA 709
Query: 636 DAGRWEDAFSIRKEMRDCGMKRLPGFS 662
++G W++ +RK M + +K+ PG+S
Sbjct: 710 ESGDWQERAKVRKLMNERNVKKEPGYS 736
Score = 157 bits (398), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 124/528 (23%), Positives = 234/528 (44%), Gaps = 71/528 (13%)
Query: 98 GYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVT 157
G + + RL +A +FDK+P + SY S++ GF+++ +EA +F ++ LG+ +
Sbjct: 36 GTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSI 95
Query: 158 LASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMK 217
+SV+ S L R LH IK V + T+L++ Y S+ + R +FDEMK
Sbjct: 96 FSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMK 155
Query: 218 ERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRA 277
ERN+V+W +++G+A+ +M D E LT++
Sbjct: 156 ERNVVTWTTLISGYAR----------------------NSMND---------EVLTLFMR 184
Query: 278 MLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGR 337
M +G PN + G GLQ+H+++VK G D + ++I+ Y CG
Sbjct: 185 MQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGN 244
Query: 338 INLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQN 397
+ AR+ F+ + +WN++I+G+ NG+ +
Sbjct: 245 VRKARILFDKTEVKSVVTWNSMISGYAANGLDLE-------------------------- 278
Query: 398 EQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLS 457
AL +F+ M V+ +E + SV A+ L+ H V+ + N+
Sbjct: 279 -----ALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIR 333
Query: 458 AAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRN 517
A++ Y+KC ++ A +F I +V W A+I G + + ++S+++++
Sbjct: 334 TALMVAYSKCTAMLDALRLFKEI-GCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKG 392
Query: 518 IKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDA 577
++ N T+ +L+ ++ E + + +K+ Y + ++D + G++E+A
Sbjct: 393 VRPNEFTYSVILTAL---PVISPSEVHAQVVKTNYERSSTVGT--ALLDAYVKLGKVEEA 447
Query: 578 EEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSL--AGLQPSH 623
+V + K D+V W +LA G E + L G++P+
Sbjct: 448 AKVFSGIDDK-DIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNE 494
Score = 124 bits (311), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 108/486 (22%), Positives = 202/486 (41%), Gaps = 101/486 (20%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E + S ++ C+ + +Q+H + K G + I+ +L+ Y+KC + A +F
Sbjct: 295 ESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFK 354
Query: 83 SCSTL-DPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALE 141
+ + V+ MISG++ QND EA++
Sbjct: 355 EIGCVGNVVSWTAMISGFL-------------------------------QNDGKEEAVD 383
Query: 142 VFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYC 201
+F +M+ GV PNE T SVI +++ + E +H V+K + + T LL+ Y
Sbjct: 384 LFSEMKRKGVRPNEFTY-SVILTALPVISPSE---VHAQVVKTNYERSSTVGTALLDAYV 439
Query: 202 VCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDG 261
+ EA +F + +++IV+W+ ML G+A+ G E A ++F G + G
Sbjct: 440 KLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMF-----------GELTKG 488
Query: 262 YLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMA-FGEGLQIHSIIVKAGFDC 320
GI PN+ +++ C A G+G Q H +K+ D
Sbjct: 489 --------------------GIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDS 528
Query: 321 YDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ 380
+ + ++ YA G I A F+ + + SWN++I+G+ ++G A +F M+
Sbjct: 529 SLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMK 588
Query: 381 KRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRW 440
KR VK + +T + VF A +G ++EG
Sbjct: 589 KRK-------------------------------VKMDGVTFIGVFAACTHAGLVEEGEK 617
Query: 441 AHEYVLNN-SITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAM 499
+ ++ + I ++ ++D+Y++ G + A +V ++ + S + W I+ +
Sbjct: 618 YFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGS-TIWRTILAACRV 676
Query: 500 HGDANL 505
H L
Sbjct: 677 HKKTEL 682
Score = 85.9 bits (211), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 114/512 (22%), Positives = 218/512 (42%), Gaps = 103/512 (20%)
Query: 37 IAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMI 96
+ V ++H+ + K+ E ++ + +L++ Y K G + +A +F D VA + M+
Sbjct: 407 LPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAML 466
Query: 97 SGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEV 156
+GY AQ A+++F ++ G+ PNE
Sbjct: 467 AGY-------------------------------AQTGETEAAIKMFGELTKGGIKPNEF 495
Query: 157 TLASVIS-SSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDE 215
T +S+++ + + + + HG IK +D + +S+ LL MY ++ A +F
Sbjct: 496 TFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKR 555
Query: 216 MKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYL----QVERLSEA 271
+E+++VSWN M++G+A+ G A ++F+ + + V G G + E
Sbjct: 556 QREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEG 615
Query: 272 LTMYRAMLCD-GIAP---NDVMIVDLISACG---RAMAFGEGLQIHSIIVKAGFDCYDFI 324
+ M+ D IAP ++ +VDL S G +AM I ++ AG + I
Sbjct: 616 EKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKV-----IENMPNPAGSTIWRTI 670
Query: 325 QATI-IHFYAACGRINLARLQFELGIKDHIASWNALIAG-FIRNGMIED---ARQLFN-- 377
A +H GR+ ++ + +K ++ L++ + +G ++ R+L N
Sbjct: 671 LAACRVHKKTELGRLAAEKI---IAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNER 727
Query: 378 NMQKRDVYSW-------SAMISG---YAQNEQPNMALE-LFHGMVDAGVKPNEITMVSVF 426
N++K YSW + ++G + +Q M LE L + D G +P+
Sbjct: 728 NVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTRLKDLGYEPDT------- 780
Query: 427 CAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTS 486
YVL + ++D A++ +++ +I AF + T
Sbjct: 781 ----------------SYVLQD---IDDEHKEAVLAQHSERLAI--AFGLI-----ATPK 814
Query: 487 VSPWNAIICGLAMHGDANLTLKIYSDLEKRNI 518
SP II L + GD +L +K+ + +E+R I
Sbjct: 815 GSPL-LIIKNLRVCGDCHLVIKLIAKIEEREI 845
>sp|Q9STE1|PP333_ARATH Pentatricopeptide repeat-containing protein At4g21300
OS=Arabidopsis thaliana GN=PCMP-E36 PE=3 SV=1
Length = 857
Score = 322 bits (825), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 184/634 (29%), Positives = 323/634 (50%), Gaps = 96/634 (15%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
L C++ + + G Q+H L+ SG++ I+NSL+++Y+KCG
Sbjct: 246 LSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCG----------------- 288
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
R +DA ++F V++ MI G+ Q+ E+L F +M
Sbjct: 289 --------------RFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISS 334
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
GV+P+ +T +S++ S + C+ +H +++ I + +++ L++ Y C
Sbjct: 335 GVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRG---- 390
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLS 269
V +A+ +F + S DVV + MI GYL
Sbjct: 391 ---------------------------VSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYI 423
Query: 270 EALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATII 329
++L M+R ++ I+PN++ +V ++ G +A G ++H I+K GFD I +I
Sbjct: 424 DSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVI 483
Query: 330 HFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSA 389
YA CGR+NLA ++F + KRD+ SW++
Sbjct: 484 DMYAKCGRMNLAY-------------------------------EIFERLSKRDIVSWNS 512
Query: 390 MISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNS 449
MI+ AQ++ P+ A+++F M +G+ + +++ + A A+ + G+ H +++ +S
Sbjct: 513 MITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHS 572
Query: 450 ITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKI 509
+ + + +IDMYAKCG++ A VF ++++ ++ WN+II HG +L +
Sbjct: 573 LASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEK--NIVSWNSIIAACGNHGKLKDSLCL 630
Query: 510 YSDL-EKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLL 568
+ ++ EK I+ + ITF+ ++S+CCH G VD G R+F+SM Y ++P +HY C+VDL
Sbjct: 631 FHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLF 690
Query: 569 GRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRV 628
GRAG+L +A E ++SMP D +WGTLL A R+H NVE+ E A+ L L PS+ V
Sbjct: 691 GRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYV 750
Query: 629 LLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
L+SN +A+A WE +R M++ ++++PG+S
Sbjct: 751 LISNAHANAREWESVTKVRSLMKEREVQKIPGYS 784
Score = 179 bits (453), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 143/648 (22%), Positives = 263/648 (40%), Gaps = 134/648 (20%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
L+ CS + QG+Q+H+ + + + +++ ++ +YA CG S MF
Sbjct: 42 LQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMF-------- 93
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
Y + R + R + S+I F +N +AL + M
Sbjct: 94 ---------YRLDLRRSSIRP------------WNSIISSFVRNGLLNQALAFYFKMLCF 132
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
GV P+ T ++ + V L L V L +D ++++L+ Y +
Sbjct: 133 GVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVP 192
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLS 269
LFD + +++ V WNVMLNG+AK G ++ ++I G
Sbjct: 193 SKLFDRVLQKDCVIWNVMLNGYAKCGALD------------------SVIKG-------- 226
Query: 270 EALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATII 329
+ M D I+PN V ++S C + G+Q+H ++V +G D I+ +++
Sbjct: 227 -----FSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLL 281
Query: 330 HFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKR------- 382
Y+ CGR + A F + + +WN +I+G++++G++E++ F M
Sbjct: 282 SMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAI 341
Query: 383 --------------------------------DVYSWSAMISGYAQNEQPNMALELFHG- 409
D++ SA+I Y + +MA +F
Sbjct: 342 TFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQC 401
Query: 410 ------------------------------MVDAGVKPNEITMVSVFCAIASSGTLKEGR 439
+V + PNEIT+VS+ I LK GR
Sbjct: 402 NSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGR 461
Query: 440 WAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAM 499
H +++ N+ A+IDMYAKCG +N A+E+F + R + WN++I A
Sbjct: 462 ELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKR--DIVSWNSMITRCAQ 519
Query: 500 HGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLK 559
+ + + I+ + I + ++ LS C + G+ M +++ D+
Sbjct: 520 SDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIK-HSLASDVY 578
Query: 560 HYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVE 607
++D+ + G L+ A V ++M K ++V W +++AA HG ++
Sbjct: 579 SESTLIDMYAKCGNLKAAMNVFKTMKEK-NIVSWNSIIAACGNHGKLK 625
Score = 102 bits (254), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 136/289 (47%), Gaps = 40/289 (13%)
Query: 20 SDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKS 79
S E+ LVS L +A+ G+++H I K G ++ I ++I++YAKCG ++ A
Sbjct: 438 SPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYE 497
Query: 80 MFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREA 139
+F+ S D V S+ SMI AQ+D A
Sbjct: 498 IFERLSKRDIV-------------------------------SWNSMITRCAQSDNPSAA 526
Query: 140 LEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNM 199
+++FR M + G+ + V++++ +S+ +L + +HG +IK + V + L++M
Sbjct: 527 IDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDM 586
Query: 200 YCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSK-----DVVS 254
Y C +L A ++F MKE+NIVSWN ++ G ++ + LF + K D ++
Sbjct: 587 YAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQIT 646
Query: 255 WGTMIDGYLQVERLSEALTMYRAMLCD-GIAPND---VMIVDLISACGR 299
+ +I V + E + +R+M D GI P +VDL GR
Sbjct: 647 FLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGR 695
Score = 85.9 bits (211), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 69/317 (21%), Positives = 137/317 (43%), Gaps = 37/317 (11%)
Query: 293 LISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRI-NLARLQFELGI-K 350
L+ AC +G Q+H+ ++ + I+ YA CG + ++ + L + +
Sbjct: 41 LLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRR 100
Query: 351 DHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGM 410
I WN++I+ F+RNG++ N AL + M
Sbjct: 101 SSIRPWNSIISSFVRNGLL-------------------------------NQALAFYFKM 129
Query: 411 VDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSI 470
+ GV P+ T + A + K + + V + + N+ +++++I Y + G I
Sbjct: 130 LCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKI 189
Query: 471 NTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLS 530
+ ++F + + + WN ++ G A G + +K +S + I N++TF VLS
Sbjct: 190 DVPSKLFDRVLQKDCVI--WNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLS 247
Query: 531 TCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADV 590
C L+DLG + + V V+ + ++ + + G+ +DA ++ R M +AD
Sbjct: 248 VCASKLLIDLGVQ-LHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMS-RADT 305
Query: 591 VIWGTLLAASRIHGNVE 607
V W +++ G +E
Sbjct: 306 VTWNCMISGYVQSGLME 322
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650
OS=Arabidopsis thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 322 bits (824), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 206/641 (32%), Positives = 313/641 (48%), Gaps = 97/641 (15%)
Query: 25 ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSC 84
L S + CSA + +GQQ+H+ K G SN I+ +L+NLYAKC I A
Sbjct: 391 TLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETA------- 443
Query: 85 STLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFR 144
LD F +T ++ V + M++ + D R + +FR
Sbjct: 444 --LD----------------------YFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFR 479
Query: 145 DMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNL-LNMYCVC 203
M+I ++PN+ T S++ + + LG + +H +IK TN LN Y VC
Sbjct: 480 QMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIK----------TNFQLNAY-VC 528
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYL 263
S V+++ +AK G ++ A ++ R KDVVSW TMI GY
Sbjct: 529 S---------------------VLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYT 567
Query: 264 QVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDF 323
Q +ALT +R ML GI ++V + + +SAC A EG QIH+ +GF
Sbjct: 568 QYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLP 627
Query: 324 IQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRD 383
Q ++ Y+ CG+I + L FE +WNAL++GF ++G E+A ++F M +
Sbjct: 628 FQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNRE- 686
Query: 384 VYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHE 443
G+ N T S A + + +K+G+ H
Sbjct: 687 ------------------------------GIDNNNFTFGSAVKAASETANMKQGKQVHA 716
Query: 444 YVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDA 503
+ + A+I MYAKCGSI+ A + F + T + WNAII + HG
Sbjct: 717 VITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEV--STKNEVSWNAIINAYSKHGFG 774
Query: 504 NLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGC 563
+ L + + N++ N +T +GVLS C H GLVD G YF+SM S Y + P +HY C
Sbjct: 775 SEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVC 834
Query: 564 MVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSH 623
+VD+L RAG L A+E I+ MP+K D ++W TLL+A +H N+E+GE AA L L+P
Sbjct: 835 VVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPED 894
Query: 624 GPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
+ VLLSN+YA + +W+ R++M++ G+K+ PG S +
Sbjct: 895 SATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWI 935
Score = 175 bits (444), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 140/605 (23%), Positives = 248/605 (40%), Gaps = 107/605 (17%)
Query: 25 ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSC 84
A S L C ++ G+Q+H L+ K G S+T++
Sbjct: 290 AFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYV------------------------ 325
Query: 85 STLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFR 144
CN ++S Y L A +F + V+Y ++I G +Q +A+E+F+
Sbjct: 326 -------CNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFK 378
Query: 145 DMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCS 204
M + G+ P+ TLAS++ + G ++ + LH KL I LLN+Y C+
Sbjct: 379 RMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCA 438
Query: 205 SLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQ 264
+ A F E + N+V WNVML V++G + D
Sbjct: 439 DIETALDYFLETEVENVVLWNVML------------------------VAYGLLDD---- 470
Query: 265 VERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFI 324
L + ++R M + I PN ++ C R G QIHS I+K F ++
Sbjct: 471 ---LRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYV 527
Query: 325 QATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDV 384
+ +I YA G+++ A W+ LI +DV
Sbjct: 528 CSVLIDMYAKLGKLDTA--------------WDILI-----------------RFAGKDV 556
Query: 385 YSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEY 444
SW+ MI+GY Q + AL F M+D G++ +E+ + + A A LKEG+ H
Sbjct: 557 VSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQ 616
Query: 445 VLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDAN 504
+ + + A++ +Y++CG I ++ F + WNA++ G G+
Sbjct: 617 ACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFE--QTEAGDNIAWNALVSGFQQSGNNE 674
Query: 505 LTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSM-KSVYNVEPDLKHYGC 563
L+++ + + I N+ TF + + G++ + K+ Y+ E ++ +
Sbjct: 675 EALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCN--A 732
Query: 564 MVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSL-----AG 618
++ + + G + DAE+ + K +V W ++ A HG G A S +
Sbjct: 733 LISMYAKCGSISDAEKQFLEVSTKNEVS-WNAIINAYSKHG---FGSEALDSFDQMIHSN 788
Query: 619 LQPSH 623
++P+H
Sbjct: 789 VRPNH 793
Score = 174 bits (441), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 138/564 (24%), Positives = 246/564 (43%), Gaps = 100/564 (17%)
Query: 38 AVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMIS 97
++ +G+++HS I K GL+SN + L + Y G
Sbjct: 100 SLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKG------------------------- 134
Query: 98 GYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVT 157
L A +VFD+ P + ++ MI A + E +F M V PNE T
Sbjct: 135 ------DLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGT 188
Query: 158 LASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMK 217
+ V+ + CR G V F ++ + AR L+ ++
Sbjct: 189 FSGVLEA---------CR--GGSV------AFDVVEQ------------IHARILYQGLR 219
Query: 218 ERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRA 277
+ +V N +++ +++ G V+LAR +F+ + KD SW MI G + E +EA+ ++
Sbjct: 220 DSTVVC-NPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCD 278
Query: 278 MLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGR 337
M GI P ++SAC + + G Q+H +++K GF ++ C
Sbjct: 279 MYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYV----------C-- 326
Query: 338 INLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQN 397
NAL++ + G + A +F+NM +RD +++ +I+G +Q
Sbjct: 327 -------------------NALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQC 367
Query: 398 EQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLS 457
A+ELF M G++P+ T+ S+ A ++ GTL G+ H Y N+ +
Sbjct: 368 GYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIE 427
Query: 458 AAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRN 517
A++++YAKC I TA + Y + +V WN ++ + D + +I+ ++
Sbjct: 428 GALLNLYAKCADIETALD--YFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEE 485
Query: 518 IKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGC--MVDLLGRAGQLE 575
I N T+ +L TC G ++LGE+ + L Y C ++D+ + G+L+
Sbjct: 486 IVPNQYTYPSILKTCIRLGDLELGEQIH---SQIIKTNFQLNAYVCSVLIDMYAKLGKLD 542
Query: 576 DAEEVIRSMPMKADVVIWGTLLAA 599
A +++ K DVV W T++A
Sbjct: 543 TAWDILIRFAGK-DVVSWTTMIAG 565
>sp|Q9FJY7|PP449_ARATH Pentatricopeptide repeat-containing protein At5g66520
OS=Arabidopsis thaliana GN=PCMP-H61 PE=2 SV=1
Length = 620
Score = 320 bits (819), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 166/476 (34%), Positives = 263/476 (55%), Gaps = 11/476 (2%)
Query: 198 NMYCV--CSSLVEARSLFDEMKERNIVSWNVMLNGF-------AKAGLVELARELFERIP 248
M C+ CS E + + M + ++ + + F + + A+ +F+
Sbjct: 17 TMSCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFD 76
Query: 249 SKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQ 308
D W MI G+ + +L +Y+ MLC N L+ AC AF E Q
Sbjct: 77 RPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQ 136
Query: 309 IHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGM 368
IH+ I K G++ + ++I+ YA G LA L F+ + SWN++I G+++ G
Sbjct: 137 IHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGK 196
Query: 369 IEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCA 428
++ A LF M +++ SW+ MISGY Q + AL+LFH M ++ V+P+ +++ + A
Sbjct: 197 MDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSA 256
Query: 429 IASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVS 488
A G L++G+W H Y+ I ++ L +IDMYAKCG + A EVF +I+ + SV
Sbjct: 257 CAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKK--SVQ 314
Query: 489 PWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSM 548
W A+I G A HG + + +++K IK N ITF VL+ C + GLV+ G+ F SM
Sbjct: 315 AWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSM 374
Query: 549 KSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEV 608
+ YN++P ++HYGC+VDLLGRAG L++A+ I+ MP+K + VIWG LL A RIH N+E+
Sbjct: 375 ERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIEL 434
Query: 609 GERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
GE + L + P HG V +NI+A +W+ A R+ M++ G+ ++PG S +
Sbjct: 435 GEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTI 490
Score = 154 bits (389), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 125/496 (25%), Positives = 217/496 (43%), Gaps = 68/496 (13%)
Query: 16 NLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLIS 75
+L+++ YE +S L+ CS + +QIH+ + K+GL +++ ++ IS
Sbjct: 9 SLEHNLYET--MSCLQRCSKQ---EELKQIHARMLKTGLMQDSYAITKFLSF-----CIS 58
Query: 76 QAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDC 135
S F P A I+ G+ R D + MI GF+ +D
Sbjct: 59 STSSDFL------PYA-QIVFDGFDRPDTF----------------LWNLMIRGFSCSDE 95
Query: 136 WREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTN 195
+L +++ M N T S++ + +L E +H + KL + V +
Sbjct: 96 PERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYENDVYAVNS 155
Query: 196 LLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSW 255
L+N Y V + A LFD + E + VSWN ++ G+ KAG +++A LF ++ K+ +SW
Sbjct: 156 LINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISW 215
Query: 256 GTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVK 315
TMI GY+Q + EAL ++ M + P++V + + +SAC + A +G IHS + K
Sbjct: 216 TTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNK 275
Query: 316 AGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQL 375
+ +I YA CG + A F+ K + +W ALI+G+ +G +A
Sbjct: 276 TRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISK 335
Query: 376 FNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTL 435
F MQK G+KPN IT +V A + +G +
Sbjct: 336 FMEMQK-------------------------------MGIKPNVITFTAVLTACSYTGLV 364
Query: 436 KEGRWAHEYVLNNSITLNDNLS--AAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAI 493
+EG+ Y + L + I+D+ + G ++ A + + +V W A+
Sbjct: 365 EEGKLIF-YSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVI-WGAL 422
Query: 494 ICGLAMHGDANLTLKI 509
+ +H + L +I
Sbjct: 423 LKACRIHKNIELGEEI 438
Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 134/312 (42%), Gaps = 49/312 (15%)
Query: 16 NLQNSDYE---LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCG 72
+QNSD E ++L +AL C+ A+ QG+ IHS + K+ + ++ + LI++YAKCG
Sbjct: 237 EMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCG 296
Query: 73 LISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQ 132
+ +A EVF K ++T++I G+A
Sbjct: 297 -------------------------------EMEEALEVFKNIKKKSVQAWTALISGYAY 325
Query: 133 NDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRML-----HGLVIKLMID 187
+ REA+ F +M+ +G+ PN +T +V+++ + G + E +++ +K I+
Sbjct: 326 HGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIE 385
Query: 188 GFVIISTNLLNMYCVCSSLVEARSLFDEMK-ERNIVSWNVMLNGFAKAGLVELARELFER 246
+ I +++ L EA+ EM + N V W +L +EL E+ E
Sbjct: 386 HYGCI----VDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEI 441
Query: 247 IPSKDVVSWGTMIDG---YLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAF 303
+ + D G + + ++ +A R M G+A V IS G F
Sbjct: 442 LIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVA--KVPGCSTISLEGTTHEF 499
Query: 304 GEGLQIHSIIVK 315
G + H I K
Sbjct: 500 LAGDRSHPEIEK 511
>sp|Q9CAA8|PP108_ARATH Putative pentatricopeptide repeat-containing protein At1g68930
OS=Arabidopsis thaliana GN=PCMP-H22 PE=3 SV=1
Length = 743
Score = 319 bits (817), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 185/623 (29%), Positives = 321/623 (51%), Gaps = 39/623 (6%)
Query: 43 QQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRN 102
+ IH I ++ TF+ N++++ YA + A+ +FD + + N ++ Y +
Sbjct: 26 KMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKA 85
Query: 103 DRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDM-RILGVIPNEVTLASV 161
+++ F+K P + V++ +I G++ + A++ + M R VTL ++
Sbjct: 86 GLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTM 145
Query: 162 ISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNI 221
+ S G + + +HG VIKL + ++++ + LL MY + +A+ +F + +RN
Sbjct: 146 LKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNT 205
Query: 222 VSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCD 281
V +N ++ G G++E A +LF R KD VSW MI G Q EA+ +R M
Sbjct: 206 VMYNSLMGGLLACGMIEDALQLF-RGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQ 264
Query: 282 GIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLA 341
G+ + ++ ACG A EG QIH+ I++ F
Sbjct: 265 GLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNF----------------------- 301
Query: 342 RLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPN 401
+DHI +ALI + + + A+ +F+ M++++V SW+AM+ GY Q +
Sbjct: 302 --------QDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAE 353
Query: 402 MALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAII 461
A+++F M +G+ P+ T+ A A+ +L+EG H + + + +S +++
Sbjct: 354 EAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLV 413
Query: 462 DMYAKCGSINTAFEVF--YHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIK 519
+Y KCG I+ + +F ++RD + W A++ A G A T++++ + + +K
Sbjct: 414 TLYGKCGDIDDSTRLFNEMNVRDAVS----WTAMVSAYAQFGRAVETIQLFDKMVQHGLK 469
Query: 520 LNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEE 579
+ +T GV+S C AGLV+ G+RYFK M S Y + P + HY CM+DL R+G+LE+A
Sbjct: 470 PDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMR 529
Query: 580 VIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGR 639
I MP D + W TLL+A R GN+E+G+ AA+SL L P H LLS+IYA G+
Sbjct: 530 FINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGK 589
Query: 640 WEDAFSIRKEMRDCGMKRLPGFS 662
W+ +R+ MR+ +K+ PG S
Sbjct: 590 WDSVAQLRRGMREKNVKKEPGQS 612
Score = 180 bits (456), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 139/562 (24%), Positives = 253/562 (45%), Gaps = 91/562 (16%)
Query: 10 FNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYA 69
+N+ + + + L++ L+ S++ VS G+QIH + K G ES + + L+ +YA
Sbjct: 126 YNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYA 185
Query: 70 KCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMG 129
G IS AK +F + V N ++ G + + DA ++F K VS+ +MI G
Sbjct: 186 NVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGME-KDSVSWAAMIKG 244
Query: 130 FAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGF 189
AQN +EA+E FR+M++ G+ ++ SV+ + LG I E + +H +I+
Sbjct: 245 LAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDH 304
Query: 190 VIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPS 249
+ + + L++MYC C L A+++FD MK++N+VSW M+ G+ + G E A ++F
Sbjct: 305 IYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIF----- 359
Query: 250 KDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQI 309
L M R+ GI P+ + ISAC + EG Q
Sbjct: 360 ----------------------LDMQRS----GIDPDHYTLGQAISACANVSSLEEGSQF 393
Query: 310 HSIIVKAGFDCYDFIQATIIHFYAACGRI-NLARLQFELGIKDHIASWNALIAGFIRNGM 368
H + +G Y + +++ Y CG I + RL E+ ++D + SW A+++ + + G
Sbjct: 394 HGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAV-SWTAMVSAYAQFGR 452
Query: 369 IEDARQLFNNM-------------------------QKRDVY---------------SWS 388
+ QLF+ M +K Y +S
Sbjct: 453 AVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYS 512
Query: 389 AMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNN 448
MI ++++ + A+ +GM P+ I ++ A + G L+ G+WA E +
Sbjct: 513 CMIDLFSRSGRLEEAMRFINGMP---FPPDAIGWTTLLSACRNKGNLEIGKWAAESL--- 566
Query: 449 SITLNDNLSAA---IIDMYAKCGSINTAFEVFYHIRDRTTSVSP------WNAIICGLAM 499
I L+ + A + +YA G ++ ++ +R++ P W + +
Sbjct: 567 -IELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHSFSA 625
Query: 500 HGDANLTL-KIYSDLEKRNIKL 520
+++ L +IY+ LE+ N K+
Sbjct: 626 DDESSPYLDQIYAKLEELNNKI 647
>sp|Q9LNU6|PPR53_ARATH Pentatricopeptide repeat-containing protein At1g20230
OS=Arabidopsis thaliana GN=PCMP-H21 PE=2 SV=2
Length = 760
Score = 317 bits (812), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 187/581 (32%), Positives = 312/581 (53%), Gaps = 20/581 (3%)
Query: 95 MISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPN 154
+I+ Y + NDA V P S++S+I + + +++ VF M G+IP+
Sbjct: 56 LIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPD 115
Query: 155 EVTLASVISSSVHLGGIWECRMLH--GLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSL 212
L ++ L + +H V L +D FV ++ +MY C + +AR +
Sbjct: 116 SHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFV--QGSMFHMYMRCGRMGDARKV 173
Query: 213 FDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSK----DVVSWGTMIDGYLQVERL 268
FD M ++++V+ + +L +A+ G +E + + S ++VSW ++ G+ +
Sbjct: 174 FDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYH 233
Query: 269 SEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATI 328
EA+ M++ + G P+ V + ++ + G + G IH ++K G + + +
Sbjct: 234 KEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAM 293
Query: 329 IHFYAACGRI-NLARL--QFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKR--- 382
I Y G + + L QFE+ NA I G RNG+++ A ++F +++
Sbjct: 294 IDMYGKSGHVYGIISLFNQFEMM---EAGVCNAYITGLSRNGLVDKALEMFELFKEQTME 350
Query: 383 -DVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWA 441
+V SW+++I+G AQN + ALELF M AGVKPN +T+ S+ A + L GR
Sbjct: 351 LNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRST 410
Query: 442 HEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHG 501
H + + + N ++ +A+IDMYAKCG IN + VF + T ++ WN+++ G +MHG
Sbjct: 411 HGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMP--TKNLVCWNSLMNGFSMHG 468
Query: 502 DANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHY 561
A + I+ L + +K + I+F +LS C GL D G +YFK M Y ++P L+HY
Sbjct: 469 KAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHY 528
Query: 562 GCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQP 621
CMV+LLGRAG+L++A ++I+ MP + D +WG LL + R+ NV++ E AA+ L L+P
Sbjct: 529 SCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEP 588
Query: 622 SHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
+ + VLLSNIYA G W + SIR +M G+K+ PG S
Sbjct: 589 ENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCS 629
Score = 178 bits (452), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 121/427 (28%), Positives = 217/427 (50%), Gaps = 17/427 (3%)
Query: 26 LVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCS 85
L + + C+ A G+QIH + SGL+ + F+Q S+ ++Y +CG + A+ +FD S
Sbjct: 119 LPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMS 178
Query: 86 TLDPVACNIMISGYIRNDRLNDAREVF---DKTPIKC-CVSYTSMIMGFAQNDCWREALE 141
D V C+ ++ Y R L + + + + I+ VS+ ++ GF ++ +EA+
Sbjct: 179 DKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVV 238
Query: 142 VFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIK--LMIDGFVIISTNLLNM 199
+F+ + LG P++VT++SV+ S + R++HG VIK L+ D VI + +++M
Sbjct: 239 MFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVI--SAMIDM 296
Query: 200 YCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSK----DVVSW 255
Y + SLF++ + N + G ++ GLV+ A E+FE + +VVSW
Sbjct: 297 YGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSW 356
Query: 256 GTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVK 315
++I G Q + EAL ++R M G+ PN V I ++ ACG A G G H V+
Sbjct: 357 TSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVR 416
Query: 316 AGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQL 375
+ + +I YA CGRINL+++ F + ++ WN+L+ GF +G ++ +
Sbjct: 417 VHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSI 476
Query: 376 FNNMQ----KRDVYSWSAMISGYAQNEQPNMALELFHGMVDA-GVKPNEITMVSVFCAIA 430
F ++ K D S+++++S Q + + F M + G+KP + +
Sbjct: 477 FESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLG 536
Query: 431 SSGTLKE 437
+G L+E
Sbjct: 537 RAGKLQE 543
Score = 49.7 bits (117), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 99/245 (40%), Gaps = 47/245 (19%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+ + S L C A+ G+ H + L N + ++LI++YAKCG
Sbjct: 389 VTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCG----------- 437
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
R+N ++ VF+ P K V + S++ GF+ + +E + +F
Sbjct: 438 --------------------RINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIF 477
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGI---WECRMLHGLVIKLMIDGFVIIS-----TN 195
+ + P+ ++ S++S+ +G W+ K+M + + I +
Sbjct: 478 ESLMRTRLKPDFISFTSLLSACGQVGLTDEGWK-------YFKMMSEEYGIKPRLEHYSC 530
Query: 196 LLNMYCVCSSLVEARSLFDEMK-ERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVS 254
++N+ L EA L EM E + W +LN V+LA E++ + +
Sbjct: 531 MVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPEN 590
Query: 255 WGTMI 259
GT +
Sbjct: 591 PGTYV 595
>sp|P0C7R0|PPR69_ARATH Pentatricopeptide repeat-containing protein At1g32415,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E56 PE=2
SV=1
Length = 761
Score = 317 bits (811), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 206/678 (30%), Positives = 346/678 (51%), Gaps = 65/678 (9%)
Query: 39 VSQGQQIHSL-----IFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACN 93
+S+G +H+ I + G + SL++ YAK G + +A+ +F+ + V CN
Sbjct: 53 LSEGGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPERNIVTCN 112
Query: 94 IMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIP 153
M++GY++ R+N+A +F + P K VS+T M+ + +A+E+F +M P
Sbjct: 113 AMLTGYVKCRRMNEAWTLFREMP-KNVVSWTVMLTALCDDGRSEDAVELFDEM------P 165
Query: 154 --NEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARS 211
N V+ ++++ + G + + + V M V+ ++ Y + EA+
Sbjct: 166 ERNVVSWNTLVTGLIRNGDMEKAKQ----VFDAMPSRDVVSWNAMIKGYIENDGMEEAKL 221
Query: 212 LFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEA 271
LF +M E+N+V+W M+ G+ + G V A LF +P +++VSW MI G+ E EA
Sbjct: 222 LFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREA 281
Query: 272 LTMYRAML--CDGIAPNDVMIVDLISACGR-AMAFGE-GLQIHSIIVKAGFDCYDF---I 324
L ++ M D ++PN ++ L ACG + F G Q+H+ ++ G++ D +
Sbjct: 282 LMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRL 341
Query: 325 QATIIHFYAACGRI----NLARLQFEL---------------------------GIKDHI 353
+++H YA+ G I +L F+L + D +
Sbjct: 342 AKSLVHMYASSGLIASAQSLLNESFDLQSCNIIINRYLKNGDLERAETLFERVKSLHDKV 401
Query: 354 ASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDA 413
SW ++I G++ G + A LF + +D +W+ MISG QNE A L MV
Sbjct: 402 -SWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRC 460
Query: 414 GVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDN--LSAAIIDMYAKCGSIN 471
G+KP T + + ++ L +G+ H + + + + L +++ MYAKCG+I
Sbjct: 461 GLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIE 520
Query: 472 TAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLST 531
A+E+F + + T WN++I GL+ HG A+ L ++ ++ K NS+TF+GVLS
Sbjct: 521 DAYEIFAKMVQKDT--VSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSA 578
Query: 532 CCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVV 591
C H+GL+ G FK+MK Y+++P + HY M+DLLGRAG+L++AEE I ++P D
Sbjct: 579 CSHSGLITRGLELFKAMKETYSIQPGIDHYISMIDLLGRAGKLKEAEEFISALPFTPDHT 638
Query: 592 IWGTLLAASRIHGNVE----VGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIR 647
++G LL ++ + + ERAA L L P + P V L N+YA GR + +R
Sbjct: 639 VYGALLGLCGLNWRDKDAEGIAERAAMRLLELDPVNAPGHVALCNVYAGLGRHDMEKEMR 698
Query: 648 KEMRDCGMKRLPGFSGVV 665
KEM G+K+ PG S VV
Sbjct: 699 KEMGIKGVKKTPGCSWVV 716
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 316 bits (809), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 200/662 (30%), Positives = 325/662 (49%), Gaps = 111/662 (16%)
Query: 16 NLQNSDYEL-ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLI 74
N++ S + L ++V+A + G+Q+H+ + G E N+FI N+L+ +Y K G +
Sbjct: 194 NVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKL 252
Query: 75 SQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQND 134
+ +K + S D V N ++S +N++L
Sbjct: 253 ASSKVLLGSFGGRDLVTWNTVLSSLCQNEQL----------------------------- 283
Query: 135 CWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKL-MIDGFVIIS 193
EALE R+M + GV P+E T++SV+ + HL + + LH +K +D +
Sbjct: 284 --LEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVG 341
Query: 194 TNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVV 253
+ L++MYC C ++ R +FD M +R I WN
Sbjct: 342 SALVDMYCNCKQVLSGRRVFDGMFDRKIGLWN---------------------------- 373
Query: 254 SWGTMIDGYLQVERLSEALTMYRAML-CDGIAPNDVMIVDLISACGRAMAFGEGLQIHSI 312
MI GY Q E EAL ++ M G+ N + ++ AC R+ AF IH
Sbjct: 374 ---AMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGF 430
Query: 313 IVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDA 372
+VK G D F+Q T++ Y+ G+I++A
Sbjct: 431 VVKRGLDRDRFVQNTLMDMYSRLGKIDIAM------------------------------ 460
Query: 373 RQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVD-----------AGVKPNEIT 421
++F M+ RD+ +W+ MI+GY +E AL L H M + +KPN IT
Sbjct: 461 -RIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSIT 519
Query: 422 MVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIR 481
++++ + A+ L +G+ H Y + N++ + + +A++DMYAKCG + + +VF I
Sbjct: 520 LMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIP 579
Query: 482 DRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLG 541
+ +V WN II MHG+ + + + + +K N +TFI V + C H+G+VD G
Sbjct: 580 QK--NVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEG 637
Query: 542 ERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVV-IWGTLLAAS 600
R F MK Y VEP HY C+VDLLGRAG++++A +++ MP + W +LL AS
Sbjct: 638 LRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGAS 697
Query: 601 RIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPG 660
RIH N+E+GE AA++L L+P+ VLL+NIY+ AG W+ A +R+ M++ G+++ PG
Sbjct: 698 RIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPG 757
Query: 661 FS 662
S
Sbjct: 758 CS 759
Score = 169 bits (428), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 146/579 (25%), Positives = 246/579 (42%), Gaps = 111/579 (19%)
Query: 42 GQQIHSLIFKSGLESNTF-IQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYI 100
G+QIH+ ++K G ++ + N+L+NLY KCG +FD S
Sbjct: 116 GKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISE-------------- 161
Query: 101 RNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLAS 160
RN VS+ S+I + W ALE FR M V P+ TL S
Sbjct: 162 RNQ-----------------VSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVS 204
Query: 161 VISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERN 220
V+++ +L M GL++ + + + LN + +
Sbjct: 205 VVTACSNLP------MPEGLMMGKQVHAYGL-RKGELNSFII------------------ 239
Query: 221 IVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLC 280
N ++ + K G + ++ L +D+V+W T++ Q E+L EAL R M+
Sbjct: 240 ----NTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVL 295
Query: 281 DGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAG-FDCYDFIQATIIHFYAACGRIN 339
+G+ P++ I ++ AC G ++H+ +K G D F+ + ++ Y C ++
Sbjct: 296 EGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVL 355
Query: 340 LARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQ 399
R F+ I WNA+IAG Y+QNE
Sbjct: 356 SGRRVFDGMFDRKIGLWNAMIAG-------------------------------YSQNEH 384
Query: 400 PNMALELFHGMVD-AGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSA 458
AL LF GM + AG+ N TM V A SG H +V+ + + +
Sbjct: 385 DKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQN 444
Query: 459 AIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAM---HGDANLTLKIYSDLEK 515
++DMY++ G I+ A +F + DR + WN +I G H DA L L +LE+
Sbjct: 445 TLMDMYSRLGKIDIAMRIFGKMEDR--DLVTWNTMITGYVFSEHHEDALLLLHKMQNLER 502
Query: 516 R--------NIKLNSITFIGVLSTCCH-AGLVDLGERYFKSMKSVYNVEPDLKHYGCMVD 566
+ ++K NSIT + +L +C + L E + ++K+ N+ D+ +VD
Sbjct: 503 KVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKN--NLATDVAVGSALVD 560
Query: 567 LLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGN 605
+ + G L+ + +V +P K +V+ W ++ A +HGN
Sbjct: 561 MYAKCGCLQMSRKVFDQIPQK-NVITWNVIIMAYGMHGN 598
Score = 135 bits (340), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 116/476 (24%), Positives = 203/476 (42%), Gaps = 77/476 (16%)
Query: 132 QNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLM--IDGF 189
+++ REA+ + DM +LG+ P+ +++ + L + + +H V K +D
Sbjct: 74 RSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDS- 132
Query: 190 VIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPS 249
V ++ L+N+Y C +FD + ERN VSWN
Sbjct: 133 VTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWN------------------------ 168
Query: 250 KDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGL-- 307
++I E+ AL +R ML + + P+ +V +++AC + EGL
Sbjct: 169 -------SLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSN-LPMPEGLMM 220
Query: 308 --QIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIR 365
Q+H+ ++ G + FI T++ Y G+ +AS L+ F
Sbjct: 221 GKQVHAYGLRKG-ELNSFIINTLVAMYGKLGK---------------LASSKVLLGSF-- 262
Query: 366 NGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSV 425
RD+ +W+ ++S QNEQ ALE MV GV+P+E T+ SV
Sbjct: 263 --------------GGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSV 308
Query: 426 FCAIASSGTLKEGRWAHEYVLNN-SITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRT 484
A + L+ G+ H Y L N S+ N + +A++DMY C + + VF + DR
Sbjct: 309 LPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRK 368
Query: 485 TSVSPWNAIICGLAMHGDANLTLKIYSDLEKR-NIKLNSITFIGVLSTCCHAGLVDLGER 543
+ WNA+I G + + L ++ +E+ + NS T GV+ C +G E
Sbjct: 369 IGL--WNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEA 426
Query: 544 YFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAA 599
++ D ++D+ R G+++ A + M + D+V W T++
Sbjct: 427 -IHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDR-DLVTWNTMITG 480
Score = 75.9 bits (185), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 122/294 (41%), Gaps = 42/294 (14%)
Query: 255 WGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIV 314
W ++ ++ L EA+ Y M+ GI P++ L+ A G QIH+ +
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 315 KAGFDCYDFIQA-TIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDAR 373
K G+ A T+++ Y CG D A +
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCG--------------DFGAVY----------------- 153
Query: 374 QLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIAS-- 431
++F+ + +R+ SW+++IS E+ MALE F M+D V+P+ T+VSV A ++
Sbjct: 154 KVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLP 213
Query: 432 -SGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVF--YHIRDRTTSVS 488
L G+ H Y L LN + ++ MY K G + ++ + + RD T
Sbjct: 214 MPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVT--- 269
Query: 489 PWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGE 542
WN ++ L + L+ ++ ++ + T VL C H ++ G+
Sbjct: 270 -WNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGK 322
Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 108/227 (47%), Gaps = 15/227 (6%)
Query: 380 QKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGR 439
Q R W ++ ++ A+ + M+ G+KP+ ++ A+A ++ G+
Sbjct: 58 QSRSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGK 117
Query: 440 WAHEYVLN-----NSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAII 494
H +V +S+T+ + L +++Y KCG ++VF I +R VS WN++I
Sbjct: 118 QIHAHVYKFGYGVDSVTVANTL----VNLYRKCGDFGAVYKVFDRISER-NQVS-WNSLI 171
Query: 495 CGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNV 554
L + L+ + + N++ +S T + V++ C + + + G K + +
Sbjct: 172 SSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPE-GLMMGKQVHAYGLR 230
Query: 555 EPDLKHY--GCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAA 599
+ +L + +V + G+ G+L ++ ++ S + D+V W T+L++
Sbjct: 231 KGELNSFIINTLVAMYGKLGKLASSKVLLGSFGGR-DLVTWNTVLSS 276
>sp|Q9FHF9|PP419_ARATH Pentatricopeptide repeat-containing protein At5g46460,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H49 PE=2
SV=1
Length = 697
Score = 315 bits (808), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 188/576 (32%), Positives = 312/576 (54%), Gaps = 48/576 (8%)
Query: 94 IMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIP 153
++I ++ + R+++AREVF++ P YT MI G+ +++ +AL +F +M + V
Sbjct: 40 VLICNHLLSRRIDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDV-- 97
Query: 154 NEVTLASVISSSVHLGGIWECRMLHGLVIKL---MIDGFVIISTNLLNMYCVCSSLVEAR 210
V+ S+IS V G + +KL M + V+ T ++N + +A
Sbjct: 98 --VSWNSMISGCVECGDM-------NTAVKLFDEMPERSVVSWTAMVNGCFRSGKVDQAE 148
Query: 211 SLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSE 270
LF +M ++ +WN M++G+ + G V+ A +LF+++P K+V+SW TMI G Q ER E
Sbjct: 149 RLFYQMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGE 208
Query: 271 ALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIH 330
AL +++ ML I +I+AC A AF G+Q+H +I+K GF +++ A++I
Sbjct: 209 ALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLIT 268
Query: 331 FYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAM 390
FYA C RI D+R++F+ V W+A+
Sbjct: 269 FYANCKRIG-------------------------------DSRKVFDEKVHEQVAVWTAL 297
Query: 391 ISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSI 450
+SGY+ N++ AL +F GM+ + PN+ T S + ++ GTL G+ H + +
Sbjct: 298 LSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGL 357
Query: 451 TLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIY 510
+ + +++ MY+ G++N A VF I + S+ WN+II G A HG I+
Sbjct: 358 ETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKK--SIVSWNSIIVGCAQHGRGKWAFVIF 415
Query: 511 SDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYN-VEPDLKHYGCMVDLLG 569
+ + N + + ITF G+LS C H G ++ G + F M S N ++ ++HY CMVD+LG
Sbjct: 416 GQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILG 475
Query: 570 RAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVL 629
R G+L++AEE+I M +K + ++W LL+A R+H +V+ GE+AA ++ L + VL
Sbjct: 476 RCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYVL 535
Query: 630 LSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGVV 665
LSNIYA AGRW + +R +M+ G+ + PG S VV
Sbjct: 536 LSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWVV 571
Score = 133 bits (335), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 104/461 (22%), Positives = 195/461 (42%), Gaps = 71/461 (15%)
Query: 49 IFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDA 108
+F E + +++N + G + QA+ +F D A N M+ GY++ +++DA
Sbjct: 119 LFDEMPERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVKDTAAWNSMVHGYLQFGKVDDA 178
Query: 109 REVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHL 168
++F + P K +S+T+MI G QN+ EAL++F++M + VI++ +
Sbjct: 179 LKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANA 238
Query: 169 GGIWECRMLHGLVIKLMIDGFV---IISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWN 225
+HGL+IKL GF+ +S +L+ Y C + ++R +FDE + W
Sbjct: 239 PAFHMGIQVHGLIIKL---GFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWT 295
Query: 226 VMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAP 285
+L+G++ ++ +AL+++ ML + I P
Sbjct: 296 ALLSGYSLN-------------------------------KKHEDALSIFSGMLRNSILP 324
Query: 286 NDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQF 345
N +++C G ++H + VK G + F+ +++ Y+ G +N A F
Sbjct: 325 NQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVF 384
Query: 346 ELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALE 405
K I SWN++I G AQ+ + A
Sbjct: 385 IKIFKKSIVSWNSIIV-------------------------------GCAQHGRGKWAFV 413
Query: 406 LFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLN--NSITLNDNLSAAIIDM 463
+F M+ +P+EIT + A + G L++GR Y+ + N I ++D+
Sbjct: 414 IFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDI 473
Query: 464 YAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDAN 504
+CG + A E+ + + + W A++ MH D +
Sbjct: 474 LGRCGKLKEAEELIERMVVKPNEMV-WLALLSACRMHSDVD 513
Score = 79.3 bits (194), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 125/306 (40%), Gaps = 75/306 (24%)
Query: 33 CSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVAC 92
C+ A G Q+H LI K G ++ SLI YA C I ++ +FD
Sbjct: 235 CANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVW 294
Query: 93 NIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVI 152
++SGY N + D AL +F M ++
Sbjct: 295 TALLSGYSLNKKHED-------------------------------ALSIFSGMLRNSIL 323
Query: 153 PNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSL 212
PN+ T AS ++S LG + + +HG+ +KL ++ + +L+ MY ++ +A S+
Sbjct: 324 PNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSV 383
Query: 213 FDEMKERNIVSWNVMLNGFAK-----------------------------------AGLV 237
F ++ +++IVSWN ++ G A+ G +
Sbjct: 384 FIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFL 443
Query: 238 ELARELFERIPS------KDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIV 291
E R+LF + S + + + M+D + +L EA + M+ + PN+++ +
Sbjct: 444 EKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIERMV---VKPNEMVWL 500
Query: 292 DLISAC 297
L+SAC
Sbjct: 501 ALLSAC 506
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 92/206 (44%), Gaps = 37/206 (17%)
Query: 25 ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSC 84
S L CSA + G+++H + K GLE++ F+ NSL+ +Y+ G
Sbjct: 328 TFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSG------------ 375
Query: 85 STLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFR 144
+NDA VF K K VS+ S+I+G AQ+ + A +F
Sbjct: 376 -------------------NVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFG 416
Query: 145 DMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLM--IDGFVIISTNLLNMYCV 202
M L P+E+T ++S+ H G + + R L + + ID + T ++++
Sbjct: 417 QMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGR 476
Query: 203 CSSLVEARSLFDEMKERNIVSWNVML 228
C L EA +E+ ER +V N M+
Sbjct: 477 CGKLKEA----EELIERMVVKPNEMV 498
>sp|Q9ZUT5|PP191_ARATH Pentatricopeptide repeat-containing protein At2g37310
OS=Arabidopsis thaliana GN=PCMP-E49 PE=2 SV=1
Length = 657
Score = 314 bits (805), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 178/632 (28%), Positives = 318/632 (50%), Gaps = 80/632 (12%)
Query: 44 QIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRND 103
Q+H+ I ++ + F+ + LI+ Y + D
Sbjct: 43 QLHARIVVFSIKPDNFLASKLISFYTR-------------------------------QD 71
Query: 104 RLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILG--------VIPNE 155
R A VFD+ ++ SY ++++ + + + +A +F + +G P+
Sbjct: 72 RFRQALHVFDEITVRNAFSYNALLIAYTSREMYFDAFSLF--LSWIGSSCYSSDAARPDS 129
Query: 156 VTLASVISSSVHLGGIW---ECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSL 212
++++ V+ + W R +HG VI+ D V + ++ Y C ++ AR +
Sbjct: 130 ISISCVLKALSGCDDFWLGSLARQVHGFVIRGGFDSDVFVGNGMITYYTKCDNIESARKV 189
Query: 213 FDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEAL 272
FDEM ER++VSWN M++G++++G E ++
Sbjct: 190 FDEMSERDVVSWNSMISGYSQSGSFEDCKK------------------------------ 219
Query: 273 TMYRAML-CDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHF 331
MY+AML C PN V ++ + ACG++ GL++H +++ + +I F
Sbjct: 220 -MYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGF 278
Query: 332 YAACGRINLARLQF-ELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAM 390
YA CG ++ AR F E+ KD + ++ A+I+G++ +G++++A LF+ M+ + +W+AM
Sbjct: 279 YAKCGSLDYARALFDEMSEKDSV-TYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAM 337
Query: 391 ISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSI 450
ISG QN + F M+ G +PN +T+ S+ ++ S LK G+ H + + N
Sbjct: 338 ISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGA 397
Query: 451 TLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIY 510
N ++ +IID YAK G + A VF + +DR S+ W AII A+HGD++ ++
Sbjct: 398 DNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDR--SLIAWTAIITAYAVHGDSDSACSLF 455
Query: 511 SDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGR 570
++ K + +T VLS H+G D+ + F SM + Y++EP ++HY CMV +L R
Sbjct: 456 DQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSR 515
Query: 571 AGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLL 630
AG+L DA E I MP+ +WG LL + + G++E+ A L ++P + + ++
Sbjct: 516 AGKLSDAMEFISKMPIDPIAKVWGALLNGASVLGDLEIARFACDRLFEMEPENTGNYTIM 575
Query: 631 SNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
+N+Y AGRWE+A +R +M+ G+K++PG S
Sbjct: 576 ANLYTQAGRWEEAEMVRNKMKRIGLKKIPGTS 607
Score = 160 bits (404), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 127/484 (26%), Positives = 217/484 (44%), Gaps = 75/484 (15%)
Query: 26 LVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCS 85
++ AL C S +Q+H + + G +S+ F+ N +I Y KC I A+ +FD S
Sbjct: 135 VLKALSGCDDFWLGSLARQVHGFVIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMS 194
Query: 86 TLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRD 145
D V+ N MISGY ++ D ++++ K + C D
Sbjct: 195 ERDVVSWNSMISGYSQSGSFEDCKKMY-KAMLACS------------------------D 229
Query: 146 MRILGVIPNEVTLASVISSSVHLGGIWECRMLHGL-VIKLMIDGFVIISTNLLN----MY 200
+ PN VT+ SV + ++ GL V K MI+ + + +L N Y
Sbjct: 230 FK-----PNGVTVISVFQACGQ-----SSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFY 279
Query: 201 CVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMID 260
C SL AR+LFDEM E++ V++ +++G+ GLV+ A LF + S + +W MI
Sbjct: 280 AKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMIS 339
Query: 261 GYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDC 320
G +Q E + +R M+ G PN V + L+ + + G +IH+ ++ G D
Sbjct: 340 GLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADN 399
Query: 321 YDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ 380
++ +II N A+L F LG A+++F+N +
Sbjct: 400 NIYVTTSIID--------NYAKLGFLLG-----------------------AQRVFDNCK 428
Query: 381 KRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRW 440
R + +W+A+I+ YA + + A LF M G KP+++T+ +V A A SG +
Sbjct: 429 DRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQH 488
Query: 441 AHEYVLNN-SITLNDNLSAAIIDMYAKCGSINTAFEVFYHIR-DRTTSVSPWNAIICGLA 498
+ +L I A ++ + ++ G ++ A E + D V W A++ G +
Sbjct: 489 IFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFISKMPIDPIAKV--WGALLNGAS 546
Query: 499 MHGD 502
+ GD
Sbjct: 547 VLGD 550
Score = 113 bits (282), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 85/380 (22%), Positives = 181/380 (47%), Gaps = 16/380 (4%)
Query: 14 KANLQNSDYE---LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAK 70
KA L SD++ + ++S + C + G ++H + ++ ++ + + N++I YAK
Sbjct: 222 KAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAK 281
Query: 71 CGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGF 130
CG + A+++FD S D V +ISGY+ + + +A +F + ++ +MI G
Sbjct: 282 CGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGL 341
Query: 131 AQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFV 190
QN+ E + FR+M G PN VTL+S++ S + + + +H I+ D +
Sbjct: 342 MQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNI 401
Query: 191 IISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERI--- 247
++T++++ Y L+ A+ +FD K+R++++W ++ +A G + A LF+++
Sbjct: 402 YVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCL 461
Query: 248 -PSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCD-GIAPNDVMIVDLISACGRAMAFGE 305
D V+ ++ + A ++ +ML I P ++S RA +
Sbjct: 462 GTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSD 521
Query: 306 GLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQ----FELGIKDHIASWNALIA 361
++ I K D + +++ + G + +AR FE+ ++ ++ +
Sbjct: 522 AME---FISKMPIDPIAKVWGALLNGASVLGDLEIARFACDRLFEME-PENTGNYTIMAN 577
Query: 362 GFIRNGMIEDARQLFNNMQK 381
+ + G E+A + N M++
Sbjct: 578 LYTQAGRWEEAEMVRNKMKR 597
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 121/305 (39%), Gaps = 33/305 (10%)
Query: 307 LQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRN 366
LQ+H+ IV +F+ + +I FY R A F+ + S+NAL+ +
Sbjct: 42 LQLHARIVVFSIKPDNFLASKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSR 101
Query: 367 GMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVF 426
M DA LF + YS A +P+ I++ V
Sbjct: 102 EMYFDAFSLFLSWIGSSCYSSDA-------------------------ARPDSISISCVL 136
Query: 427 CAIASSGTLKEG---RWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDR 483
A++ G R H +V+ + + +I Y KC +I +A +VF + +R
Sbjct: 137 KALSGCDDFWLGSLARQVHGFVIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSER 196
Query: 484 TTSVSPWNAIICGLAMHGDANLTLKIYSD-LEKRNIKLNSITFIGVLSTCCHAGLVDLGE 542
V WN++I G + G K+Y L + K N +T I V C + + G
Sbjct: 197 --DVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGL 254
Query: 543 RYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRI 602
K M + ++ DL ++ + G L+ A + M K D V +G +++
Sbjct: 255 EVHKKMIENH-IQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEK-DSVTYGAIISGYMA 312
Query: 603 HGNVE 607
HG V+
Sbjct: 313 HGLVK 317
>sp|Q9FI80|PP425_ARATH Pentatricopeptide repeat-containing protein At5g48910
OS=Arabidopsis thaliana GN=PCMP-H38 PE=2 SV=1
Length = 646
Score = 312 bits (800), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 164/443 (37%), Positives = 256/443 (57%), Gaps = 19/443 (4%)
Query: 237 VELARELFERIPSKDVVSWGTMIDGYLQVERLSE--ALTMYRAMLCDG-IAPNDVMIVDL 293
++ A ++F ++P ++ SW T+I G+ + + A+T++ M+ D + PN +
Sbjct: 75 LDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSV 134
Query: 294 ISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGI--KD 351
+ AC + EG QIH + +K GF +F+ + ++ Y CG + AR+ F I KD
Sbjct: 135 LKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKD 194
Query: 352 ------------HIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQ 399
I WN +I G++R G + AR LF+ M++R V SW+ MISGY+ N
Sbjct: 195 MVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGF 254
Query: 400 PNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAA 459
A+E+F M ++PN +T+VSV AI+ G+L+ G W H Y ++ I ++D L +A
Sbjct: 255 FKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSA 314
Query: 460 IIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIK 519
+IDMY+KCG I A VF + +V W+A+I G A+HG A + + + + ++
Sbjct: 315 LIDMYSKCGIIEKAIHVFERLP--RENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVR 372
Query: 520 LNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEE 579
+ + +I +L+ C H GLV+ G RYF M SV +EP ++HYGCMVDLLGR+G L++AEE
Sbjct: 373 PSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEE 432
Query: 580 VIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGR 639
I +MP+K D VIW LL A R+ GNVE+G+R A L + P + V LSN+YA G
Sbjct: 433 FILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGN 492
Query: 640 WEDAFSIRKEMRDCGMKRLPGFS 662
W + +R M++ +++ PG S
Sbjct: 493 WSEVSEMRLRMKEKDIRKDPGCS 515
Score = 156 bits (394), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 118/484 (24%), Positives = 220/484 (45%), Gaps = 77/484 (15%)
Query: 44 QIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRND 103
QIH++ KSG +T ++ C+T D + +
Sbjct: 41 QIHAVFIKSGQMRDTLAAAEILRF----------------CATSD-----------LHHR 73
Query: 104 RLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWRE--ALEVFRDMRILGVI-PNEVTLAS 160
L+ A ++F++ P + C S+ ++I GF+++D + A+ +F +M + PN T S
Sbjct: 74 DLDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPS 133
Query: 161 VISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLF------- 213
V+ + G I E + +HGL +K G + +NL+ MY +C + +AR LF
Sbjct: 134 VLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEK 193
Query: 214 -----DEMKERN--IVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVE 266
+ ++R+ IV WNVM++G+ + G + AR LF+++ + VVSW TMI GY
Sbjct: 194 DMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNG 253
Query: 267 RLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQA 326
+A+ ++R M I PN V +V ++ A R + G +H +G D + +
Sbjct: 254 FFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGS 313
Query: 327 TIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYS 386
+I Y+ CG I A FE ++++ +W+A+I GF +G DA F M++
Sbjct: 314 ALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQ----- 368
Query: 387 WSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG-RWAHEYV 445
AGV+P+++ +++ A + G ++EG R+ + V
Sbjct: 369 --------------------------AGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMV 402
Query: 446 LNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANL 505
+ + ++D+ + G ++ A E ++ + V W A++ M G+ +
Sbjct: 403 SVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVI-WKALLGACRMQGNVEM 461
Query: 506 TLKI 509
++
Sbjct: 462 GKRV 465
Score = 129 bits (324), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 102/392 (26%), Positives = 175/392 (44%), Gaps = 60/392 (15%)
Query: 28 SALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMF------ 81
S L+ C+ + +G+QIH L K G + F+ ++L+ +Y CG + A+ +F
Sbjct: 133 SVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIE 192
Query: 82 -DSCSTLDP-------VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQN 133
D D V N+MI GY+R AR +FDK + VS+ +MI G++ N
Sbjct: 193 KDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLN 252
Query: 134 DCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIIS 193
+++A+EVFR+M+ + PN VTL SV+ + LG + LH I ++
Sbjct: 253 GFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLG 312
Query: 194 TNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVV 253
+ L++MY C + +A +F+ + N+++W+ M+NGFA G
Sbjct: 313 SALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQA---------------- 356
Query: 254 SWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSII 313
G ID + ++ + G+ P+DV ++L++AC EG + S +
Sbjct: 357 --GDAIDCFCKMRQA-------------GVRPSDVAYINLLTACSHGGLVEEGRRYFSQM 401
Query: 314 VKAGFDCYDFIQATIIHF---YAACGRINL----ARLQFELGIKDHIASWNALIAGFIRN 366
V D ++ I H+ GR L + IK W AL+
Sbjct: 402 VSV-----DGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQ 456
Query: 367 GMIEDARQLFN---NMQKRDVYSWSAMISGYA 395
G +E +++ N +M D ++ A+ + YA
Sbjct: 457 GNVEMGKRVANILMDMVPHDSGAYVALSNMYA 488
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 102/244 (41%), Gaps = 46/244 (18%)
Query: 8 SVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINL 67
VF K +Y + LVS L S ++ G+ +H SG+ + + ++LI++
Sbjct: 260 EVFREMKKGDIRPNY-VTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDM 318
Query: 68 YAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMI 127
Y+KCG+I +A VF++ P + +++++MI
Sbjct: 319 YSKCGIIEKAI-------------------------------HVFERLPRENVITWSAMI 347
Query: 128 MGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMID 187
GFA + +A++ F MR GV P++V +++++ H G + E R ++ +D
Sbjct: 348 NGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVS--VD 405
Query: 188 GFVIISTNLLNMYCVCSSLVEARSLFDEMKE--------RNIVSWNVMLNGFAKAGLVEL 239
G + Y L+ L DE +E + V W +L G VE+
Sbjct: 406 GL----EPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGNVEM 461
Query: 240 AREL 243
+ +
Sbjct: 462 GKRV 465
>sp|Q9FIF7|PP435_ARATH Putative pentatricopeptide repeat-containing protein At5g59200,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-E41 PE=3
SV=1
Length = 544
Score = 308 bits (788), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 156/429 (36%), Positives = 261/429 (60%), Gaps = 8/429 (1%)
Query: 237 VELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISA 296
V+ A ++F + + +V + MIDG++ R ++ +++Y M+ + + P++ +I ++ A
Sbjct: 77 VDYAYDVFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKA 136
Query: 297 CGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQF-ELGIKDHIAS 355
C + +IH+ ++K GF + ++ Y G + A+ F E+ +DH+A+
Sbjct: 137 CDLKVC----REIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAA 192
Query: 356 WNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGV 415
+I + G I++A +LF +++ +D W+AMI G +N++ N ALELF M V
Sbjct: 193 -TVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENV 251
Query: 416 KPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFE 475
NE T V V A + G L+ GRW H +V N + L++ + A+I+MY++CG IN A
Sbjct: 252 SANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARR 311
Query: 476 VFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHA 535
VF +RD+ V +N +I GLAMHG + + + D+ R + N +T + +L+ C H
Sbjct: 312 VFRVMRDK--DVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHG 369
Query: 536 GLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGT 595
GL+D+G F SMK V+NVEP ++HYGC+VDLLGR G+LE+A I ++P++ D ++ GT
Sbjct: 370 GLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGT 429
Query: 596 LLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGM 655
LL+A +IHGN+E+GE+ AK L + + VLLSN+YA +G+W+++ IR+ MRD G+
Sbjct: 430 LLSACKIHGNMELGEKIAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGI 489
Query: 656 KRLPGFSGV 664
++ PG S +
Sbjct: 490 EKEPGCSTI 498
Score = 151 bits (381), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 137/563 (24%), Positives = 238/563 (42%), Gaps = 112/563 (19%)
Query: 25 ALVSALRYCS--AHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
L+S LR C AH+ IH+ I ++ + + F+ LI +
Sbjct: 31 TLISVLRSCKNIAHVP-----SIHAKIIRTFHDQDAFVVFELIRV--------------- 70
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
CSTLD V + Y+ N + YT+MI GF + + + +
Sbjct: 71 -CSTLDSVDYAYDVFSYVSNPNV---------------YLYTAMIDGFVSSGRSADGVSL 114
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
+ M V+P+ + SV+ + + CR +H V+KL + ++ +Y
Sbjct: 115 YHRMIHNSVLPDNYVITSVLKAC----DLKVCREIHAQVLKLGFGSSRSVGLKMMEIYGK 170
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
LV A+ +FDEM +R+ V+ VM+N +++ G ++ A ELF+ + KD V W MIDG
Sbjct: 171 SGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGL 230
Query: 263 LQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD 322
++ + +++AL ++R M + ++ N+ V ++SAC A G +HS + + +
Sbjct: 231 VRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSN 290
Query: 323 FIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKR 382
F+ +I+ Y+ CG IN AR F + + S+N +I+G +G
Sbjct: 291 FVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGA-------------- 336
Query: 383 DVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAH 442
S A NE F MV+ G +PN++T+V++ A + G L G
Sbjct: 337 ---------SVEAINE--------FRDMVNRGFRPNQVTLVALLNACSHGGLLDIG---- 375
Query: 443 EYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPW-NAIICGLAMHG 501
EVF ++ R +V P C + + G
Sbjct: 376 -------------------------------LEVFNSMK-RVFNVEPQIEHYGCIVDLLG 403
Query: 502 DANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHY 561
+ Y +E I+ + I +LS C G ++LGE+ K + N PD Y
Sbjct: 404 RVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKIAKRLFESEN--PDSGTY 461
Query: 562 GCMVDLLGRAGQLEDAEEVIRSM 584
+ +L +G+ +++ E+ SM
Sbjct: 462 VLLSNLYASSGKWKESTEIRESM 484
Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 73/151 (48%), Gaps = 32/151 (21%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E V L CS A+ G+ +HS + +E + F+ N+LIN+Y++CG I++A+ +F
Sbjct: 255 EFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVF- 313
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
R + DK I SY +MI G A + EA+
Sbjct: 314 --------------------------RVMRDKDVI----SYNTMISGLAMHGASVEAINE 343
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWE 173
FRDM G PN+VTL +++++ H GG+ +
Sbjct: 344 FRDMVNRGFRPNQVTLVALLNACSH-GGLLD 373
>sp|Q9LXF2|PP385_ARATH Pentatricopeptide repeat-containing protein At5g15300
OS=Arabidopsis thaliana GN=PCMP-E40 PE=2 SV=2
Length = 548
Score = 307 bits (786), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 161/464 (34%), Positives = 263/464 (56%), Gaps = 39/464 (8%)
Query: 235 GLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLI 294
G ++ A +LF+ IP DV ++ G Q + + +++Y M G++P+ ++
Sbjct: 60 GALKYAHKLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVL 119
Query: 295 SACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIA 354
AC + G H +V+ GF ++++ +I F+A CG + +A F+ K H
Sbjct: 120 KACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKV 179
Query: 355 SWNALIAGFIRNGMIEDA-------------------------------RQLFNNMQKRD 383
+W+++ +G+ + G I++A R+LF+ ++D
Sbjct: 180 AWSSMTSGYAKRGKIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKD 239
Query: 384 VYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHE 443
V +W+AMISGY P AL +F M DAG P+ +T++S+ A A G L+ G+ H
Sbjct: 240 VVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHI 299
Query: 444 YVL-----NNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLA 498
Y+L ++SI + + A+IDMYAKCGSI+ A EVF ++DR +S WN +I GLA
Sbjct: 300 YILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDR--DLSTWNTLIVGLA 357
Query: 499 MHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDL 558
+H A +++++ ++++ + N +TFIGV+ C H+G VD G +YF M+ +YN+EP++
Sbjct: 358 LH-HAEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNI 416
Query: 559 KHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAG 618
KHYGCMVD+LGRAGQLE+A + SM ++ + ++W TLL A +I+GNVE+G+ A + L
Sbjct: 417 KHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLLGACKIYGNVELGKYANEKLLS 476
Query: 619 LQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
++ VLLSNIYA G+W+ +RK D +K+ G S
Sbjct: 477 MRKDESGDYVLLSNIYASTGQWDGVQKVRKMFDDTRVKKPTGVS 520
Score = 136 bits (343), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 120/477 (25%), Positives = 207/477 (43%), Gaps = 53/477 (11%)
Query: 43 QQIHSLIFKSGLESNTFIQNSLINLYAKC----GLISQAKSMFDSCSTLDPVACNIMISG 98
+QIH+ + +GL SN + LI Y+ G + A +FD D CN ++ G
Sbjct: 29 KQIHASMVVNGLMSNLSVVGELI--YSASLSVPGALKYAHKLFDEIPKPDVSICNHVLRG 86
Query: 99 YIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDC----WREALEVFRDMRIL-GVIP 153
++ + ++ + K VS F C WR F + G +
Sbjct: 87 SAQSMKPEKTVSLYTEME-KRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVRHGFVL 145
Query: 154 NEVTLASVISSSVHLGGIWECRMLHGLVIKLMID---GFVIISTNLLNMYCVCSSLVEAR 210
NE ++I + G + G+ +L D + +++ + Y + EA
Sbjct: 146 NEYVKNALILFHANCGDL-------GIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAM 198
Query: 211 SLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSE 270
LFDEM ++ V+WNVM+ G K ++ ARELF+R KDVV+W MI GY+ E
Sbjct: 199 RLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKE 258
Query: 271 ALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIH 330
AL +++ M G P+ V I+ L+SAC G ++H I++ T I
Sbjct: 259 ALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPI- 317
Query: 331 FYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAM 390
WNALI + + G I+ A ++F ++ RD+ +W+ +
Sbjct: 318 -------------------------WNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTL 352
Query: 391 ISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSI 450
I G A + ++E+F M V PNE+T + V A + SG + EGR + ++ +
Sbjct: 353 IVGLALHHAEG-SIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGR-KYFSLMRDMY 410
Query: 451 TLNDNLS--AAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANL 505
+ N+ ++DM + G + AF ++ ++ W ++ ++G+ L
Sbjct: 411 NIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIV-WRTLLGACKIYGNVEL 466
Score = 57.0 bits (136), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 99/233 (42%), Gaps = 39/233 (16%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESN-----TFIQNSLINLYAKCGLISQAK 78
+ ++S L C+ + G+++H I ++ S+ T I N+LI++YAKCG I +A
Sbjct: 276 VTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAI 335
Query: 79 SMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWRE 138
+F D N +I G + + A+
Sbjct: 336 EVFRGVKDRDLSTWNTLIVG---------------------------LALHHAEG----- 363
Query: 139 ALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLM-IDGFVIISTNLL 197
++E+F +M+ L V PNEVT VI + H G + E R L+ + I+ + ++
Sbjct: 364 SIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMV 423
Query: 198 NMYCVCSSLVEARSLFDEMK-ERNIVSWNVMLNGFAKAGLVELARELFERIPS 249
+M L EA + MK E N + W +L G VEL + E++ S
Sbjct: 424 DMLGRAGQLEEAFMFVESMKIEPNAIVWRTLLGACKIYGNVELGKYANEKLLS 476
>sp|Q9MA50|PPR13_ARATH Pentatricopeptide repeat-containing protein At1g05750,
chloroplastic OS=Arabidopsis thaliana GN=PDE247 PE=2
SV=1
Length = 500
Score = 306 bits (783), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 157/420 (37%), Positives = 250/420 (59%), Gaps = 6/420 (1%)
Query: 249 SKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQ 308
S+ VSW + I+ + RL+EA + M G+ PN + + L+S CG + E L
Sbjct: 33 SETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALG 92
Query: 309 --IHSIIVKAGFD-CYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIR 365
+H K G D + + II Y+ GR ARL F+ + +WN +I G++R
Sbjct: 93 DLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMR 152
Query: 366 NGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSV 425
+G +++A ++F+ M +RD+ SW+AMI+G+ + AL F M +GVKP+ + +++
Sbjct: 153 SGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAA 212
Query: 426 FCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTT 485
A + G L G W H YVL+ N +S ++ID+Y +CG + A +VFY++ RT
Sbjct: 213 LNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRT- 271
Query: 486 SVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYF 545
V WN++I G A +G+A+ +L + ++++ K +++TF G L+ C H GLV+ G RYF
Sbjct: 272 -VVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYF 330
Query: 546 KSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHG- 604
+ MK Y + P ++HYGC+VDL RAG+LEDA ++++SMPMK + V+ G+LLAA HG
Sbjct: 331 QIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHGN 390
Query: 605 NVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
N+ + ER K L L + V+LSN+YA G+WE A +R++M+ G+K+ PGFS +
Sbjct: 391 NIVLAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGFSSI 450
Score = 160 bits (405), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 108/416 (25%), Positives = 198/416 (47%), Gaps = 39/416 (9%)
Query: 113 DKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIW 172
+++ + VS+TS I +N EA + F DM + GV PN +T +++S
Sbjct: 29 NQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGS 88
Query: 173 EC--RMLHGLVIKLMID-GFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLN 229
E +LHG KL +D V++ T ++ MY +AR +FD M+++N V+WN M++
Sbjct: 89 EALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMID 148
Query: 230 GFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVM 289
G+ ++G V+ A ++F+++P +D++SW MI+G+++ EAL +R M G+ P+ V
Sbjct: 149 GYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVA 208
Query: 290 IVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGI 349
I+ ++AC A GL +H ++ F + ++I Y CG + AR F
Sbjct: 209 IIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNME 268
Query: 350 KDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHG 409
K + SWN++I GF NG ++ F MQ++
Sbjct: 269 KRTVVSWNSVIVGFAANGNAHESLVYFRKMQEK--------------------------- 301
Query: 410 MVDAGVKPNEITMVSVFCAIASSGTLKEG-RWAHEYVLNNSITLNDNLSAAIIDMYAKCG 468
G KP+ +T A + G ++EG R+ + I+ ++D+Y++ G
Sbjct: 302 ----GFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAG 357
Query: 469 SINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTL--KIYSDLEKRNIKLNS 522
+ A ++ + + V +++ + HG+ N+ L ++ L N+K +S
Sbjct: 358 RLEDALKLVQSMPMKPNEVVI-GSLLAACSNHGN-NIVLAERLMKHLTDLNVKSHS 411
Score = 131 bits (330), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/334 (27%), Positives = 162/334 (48%), Gaps = 49/334 (14%)
Query: 23 ELALVSALRYCSAHIAVSQ--GQQIHSLIFKSGLESN-TFIQNSLINLYAKCGLISQAKS 79
+ ++ L C + S+ G +H K GL+ N + ++I +Y+K G +A+
Sbjct: 71 HITFIALLSGCGDFTSGSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARL 130
Query: 80 MFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREA 139
+FD + V N MI GY+R+ ++++A ++FDK P + +S+T+MI GF + EA
Sbjct: 131 VFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEA 190
Query: 140 LEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNM 199
L FR+M+I GV P+ V + + +++ +LG + +H V+ V +S +L+++
Sbjct: 191 LLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDL 250
Query: 200 YCVCSSLVEARSLFDEMKERNIVSWNVMLNGFA--------------------------- 232
YC C + AR +F M++R +VSWN ++ GFA
Sbjct: 251 YCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTF 310
Query: 233 --------KAGLVELARELFERIP-----SKDVVSWGTMIDGYLQVERLSEALTMYRAML 279
GLVE F+ + S + +G ++D Y + RL +AL + ++M
Sbjct: 311 TGALTACSHVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSM- 369
Query: 280 CDGIAPNDVMIVDLISAC---GRAMAFGEGLQIH 310
+ PN+V+I L++AC G + E L H
Sbjct: 370 --PMKPNEVVIGSLLAACSNHGNNIVLAERLMKH 401
Score = 67.0 bits (162), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 107/269 (39%), Gaps = 44/269 (16%)
Query: 374 QLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVF--CAIAS 431
Q N SW++ I+ +N + A + F M AGV+PN IT +++ C +
Sbjct: 26 QRHNQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFT 85
Query: 432 SGTLKEGRWAHEYVLNNSITLNDNL-SAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPW 490
SG+ G H Y + N + AII MY+K G A VF ++ D+ + W
Sbjct: 86 SGSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVT--W 143
Query: 491 NAIICGLAMHGDANLTLKIYSDLEKRN-------------------------------IK 519
N +I G G + K++ + +R+ +K
Sbjct: 144 NTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVK 203
Query: 520 LNSITFIGVLSTCCHAGLVDLG---ERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLED 576
+ + I L+ C + G + G RY S NV ++DL R G +E
Sbjct: 204 PDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVS----NSLIDLYCRCGCVEF 259
Query: 577 AEEVIRSMPMKADVVIWGTLLAASRIHGN 605
A +V +M K VV W +++ +GN
Sbjct: 260 ARQVFYNME-KRTVVSWNSVIVGFAANGN 287
>sp|Q9FWA6|PP207_ARATH Pentatricopeptide repeat-containing protein At3g02330
OS=Arabidopsis thaliana GN=PCMP-E90 PE=2 SV=2
Length = 903
Score = 306 bits (783), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 194/641 (30%), Positives = 314/641 (48%), Gaps = 83/641 (12%)
Query: 28 SALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTL 87
S LR C+A + G Q+H+ KS ++ ++ + +++YAKC
Sbjct: 286 SVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKC---------------- 329
Query: 88 DPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMR 147
D + DA+ +FD + SY +MI G++Q + +AL +F +
Sbjct: 330 ---------------DNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLM 374
Query: 148 ILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLV 207
G+ +E++L+ V + + G+ E ++GL IK + V ++ ++MY C +L
Sbjct: 375 SSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALA 434
Query: 208 EARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVER 267
EA +FDEM+ R D VSW +I + Q +
Sbjct: 435 EAFRVFDEMRRR-------------------------------DAVSWNAIIAAHEQNGK 463
Query: 268 LSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQAT 327
E L ++ +ML I P++ ++ AC + G G++IHS IVK+G + +
Sbjct: 464 GYETLFLFVSMLRSRIEPDEFTFGSILKACTGG-SLGYGMEIHSSIVKSGMASNSSVGCS 522
Query: 328 IIHFYAACGRINLA-RLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYS 386
+I Y+ CG I A ++ + +++ G +E+ ++ N + S
Sbjct: 523 LIDMYSKCGMIEEAEKIHSRFFQRANVS------------GTMEELEKMHNKRLQEMCVS 570
Query: 387 WSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVL 446
W+++ISGY EQ A LF M++ G+ P++ T +V A+ + G+ H V+
Sbjct: 571 WNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVI 630
Query: 447 NNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHI--RDRTTSVSPWNAIICGLAMHGDAN 504
+ + + + ++DMY+KCG ++ + +F RD T WNA+ICG A HG
Sbjct: 631 KKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVT----WNAMICGYAHHGKGE 686
Query: 505 LTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCM 564
++++ + NIK N +TFI +L C H GL+D G YF MK Y ++P L HY M
Sbjct: 687 EAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNM 746
Query: 565 VDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIH-GNVEVGERAAKSLAGLQPSH 623
VD+LG++G+++ A E+IR MP +AD VIW TLL IH NVEV E A +L L P
Sbjct: 747 VDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQD 806
Query: 624 GPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
+ LLSN+YADAG WE +R+ MR +K+ PG S V
Sbjct: 807 SSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWV 847
Score = 188 bits (477), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 151/575 (26%), Positives = 263/575 (45%), Gaps = 70/575 (12%)
Query: 30 LRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
+ C+ A+ G+Q H+ + SG TF+ N L+ +Y A +FD D
Sbjct: 55 FKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDV 114
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
V+ N MI+GY +++ + A F+ P++ VS+ SM+ G+ QN +++EVF DM
Sbjct: 115 VSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGRE 174
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
G+ + T A ++ L +HG+V+++ D V+ ++ LL+MY VE+
Sbjct: 175 GIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVES 234
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLS 269
+F + E+N VSW+ ++ G + L+ LA + F+ + V+ G Y V R
Sbjct: 235 LRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQK---VNAGVSQSIYASVLRSC 291
Query: 270 EALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATII 329
AL+ R G Q+H+ +K+ F ++ +
Sbjct: 292 AALSELRL----------------------------GGQLHAHALKSDFAADGIVRTATL 323
Query: 330 HFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSA 389
YA C + A++ F +N + + S++A
Sbjct: 324 DMYAKCDNMQDAQILF-------------------------------DNSENLNRQSYNA 352
Query: 390 MISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNS 449
MI+GY+Q E AL LFH ++ +G+ +EI++ VF A A L EG + + +S
Sbjct: 353 MITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSS 412
Query: 450 ITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKI 509
++L+ ++ A IDMY KC ++ AF VF +R R +VS WNAII +G TL +
Sbjct: 413 LSLDVCVANAAIDMYGKCQALAEAFRVFDEMR-RRDAVS-WNAIIAAHEQNGKGYETLFL 470
Query: 510 YSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGC-MVDLL 568
+ + + I+ + TF +L C L E + +KS + GC ++D+
Sbjct: 471 FVSMLRSRIEPDEFTFGSILKACTGGSLGYGMEIHSSIVKSGMASNSSV---GCSLIDMY 527
Query: 569 GRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIH 603
+ G +E+AE++ +A+V GT+ ++H
Sbjct: 528 SKCGMIEEAEKIHSRFFQRANVS--GTMEELEKMH 560
Score = 138 bits (348), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 105/456 (23%), Positives = 197/456 (43%), Gaps = 77/456 (16%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E++L R C+ +S+G QI+ L KS L + + N+ I++Y KC +++A +FD
Sbjct: 382 EISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFD 441
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
D V+ N +I+ + +N + G+ E L +
Sbjct: 442 EMRRRDAVSWNAIIAAHEQNGK------------------------GY-------ETLFL 470
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
F M + P+E T S++ + G + +H ++K + + +L++MY
Sbjct: 471 FVSMLRSRIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSK 529
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
C + EA + +R VS G +E ++ + + VSW ++I GY
Sbjct: 530 CGMIEEAEKIHSRFFQRANVS-----------GTMEELEKMHNKRLQEMCVSWNSIISGY 578
Query: 263 LQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD 322
+ E+ +A ++ M+ GI P+ ++ C + G G QIH+ ++K
Sbjct: 579 VMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDV 638
Query: 323 FIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKR 382
+I +T++ Y+ CG ++ +RL FE ++ +WNA+I G+ +G E+A QLF
Sbjct: 639 YICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFER---- 694
Query: 383 DVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAH 442
M+ +KPN +T +S+ A A G + +G +
Sbjct: 695 ---------------------------MILENIKPNHVTFISILRACAHMGLIDKG-LEY 726
Query: 443 EYVLNNSITLNDNLS--AAIIDMYAKCGSINTAFEV 476
Y++ L+ L + ++D+ K G + A E+
Sbjct: 727 FYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALEL 762
>sp|Q9LHN5|PP242_ARATH Putative pentatricopeptide repeat-containing protein At3g18840
OS=Arabidopsis thaliana GN=PCMP-E92 PE=2 SV=1
Length = 678
Score = 305 bits (781), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 186/628 (29%), Positives = 336/628 (53%), Gaps = 15/628 (2%)
Query: 46 HSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRL 105
H KSG N L+NLY+K GL+ +A+++FD + + N +I+ Y++ + +
Sbjct: 11 HIRSIKSGSTLTAVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYVKFNNV 70
Query: 106 NDAREVFDKTPI-KCCVSYTSMIMGFAQND-CWREALEVFRDMRIL---GVIPNEVTLAS 160
+ARE+F+ + ++Y +++ GFA+ D C EA+E+F +M + ++ T+ +
Sbjct: 71 KEARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTT 130
Query: 161 VISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDE--MKE 218
++ S L ++ LHG+++K DG ++L++MY C E ++F+ ++
Sbjct: 131 MVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEF 190
Query: 219 RNIVSWNVMLNGFAKAGLVELARELFERIPS-KDVVSWGTMIDGYLQVERLSEALTMYRA 277
+ V+ N M+ + + G ++ A +F R P D +SW T+I GY Q EAL M +
Sbjct: 191 VDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVS 250
Query: 278 MLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGR 337
M +G+ ++ +++ + G ++H+ ++K G F+ + I+ Y CG
Sbjct: 251 MEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGN 310
Query: 338 INLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQN 397
+ A L ++ S +++I G+ G + +A++LF+++ ++++ W+AM GY
Sbjct: 311 MKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNL 370
Query: 398 EQPNMALELFHGMV-DAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNL 456
QP+ LEL + + P+ + MVSV A + ++ G+ H + L I ++ L
Sbjct: 371 RQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKL 430
Query: 457 SAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKR 516
A +DMY+KCG++ A +F +R T + +NA+I G A HG + + + D+ +
Sbjct: 431 VTAFVDMYSKCGNVEYAERIFDSSFERDTVM--YNAMIAGCAHHGHEAKSFQHFEDMTEG 488
Query: 517 NIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLED 576
K + ITF+ +LS C H GLV GE+YFKSM YN+ P+ HY CM+DL G+A +L+
Sbjct: 489 GFKPDEITFMALLSACRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYGKAYRLDK 548
Query: 577 AEEVIRSM-PMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYA 635
A E++ + ++ D VI G L A + N E+ + + L ++ S+G + ++N YA
Sbjct: 549 AIELMEGIDQVEKDAVILGAFLNACSWNKNTELVKEVEEKLLVIEGSNGSRYIQIANAYA 608
Query: 636 DAGRWEDAFSIRKEMRDCGMKRLPGFSG 663
+GRW++ IR +MR K L FSG
Sbjct: 609 SSGRWDEMQRIRHQMRG---KELEIFSG 633
Score = 147 bits (372), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 108/443 (24%), Positives = 205/443 (46%), Gaps = 36/443 (8%)
Query: 39 VSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD-SC-STLDPVACNIMI 96
V G+Q+H ++ K+G + F +SLI++Y+KCG + ++F+ SC +D VA N MI
Sbjct: 141 VFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEFVDSVARNAMI 200
Query: 97 SGYIRNDRLNDAREVFDKTP-IKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNE 155
+ Y R ++ A VF + P + +S+ ++I G+AQN EAL++ M G+ +E
Sbjct: 201 AAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSMEENGLKWDE 260
Query: 156 VTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDE 215
+ +V++ L + + +H V+K +S+ ++++YC C ++ A S
Sbjct: 261 HSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLL 320
Query: 216 MKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMY 275
N+ S + M+ G++ G + A+ LF+ + K++V W M GYL + + L +
Sbjct: 321 YGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELA 380
Query: 276 RAMLCDGI-APNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAA 334
RA + + P+ +++V ++ AC G +IH ++ G + + Y+
Sbjct: 381 RAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSK 440
Query: 335 CGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGY 394
CG + A F+ + +NA+IAG +G
Sbjct: 441 CGNVEYAERIFDSSFERDTVMYNAMIAGCAHHG--------------------------- 473
Query: 395 AQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG-RWAHEYVLNNSITLN 453
+ + F M + G KP+EIT +++ A G + EG ++ + +I+
Sbjct: 474 ----HEAKSFQHFEDMTEGGFKPDEITFMALLSACRHRGLVLEGEKYFKSMIEAYNISPE 529
Query: 454 DNLSAAIIDMYAKCGSINTAFEV 476
+ID+Y K ++ A E+
Sbjct: 530 TGHYTCMIDLYGKAYRLDKAIEL 552
Score = 73.6 bits (179), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/295 (22%), Positives = 128/295 (43%), Gaps = 32/295 (10%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E + + L S+ ++ G+++H+ + K+G SN F+ + ++++Y KCG + A+S
Sbjct: 260 EHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHL 319
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+ + + MI GY ++ +A+ +FD K V +T+M +G+ LE+
Sbjct: 320 LYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLEL 379
Query: 143 FRDMRILGV-IPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYC 201
R P+ + + SV+ + + + +HG ++ I + T ++MY
Sbjct: 380 ARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYS 439
Query: 202 VCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDG 261
C ++ A +FD ER+ V +N M+ G A G + + FE M +G
Sbjct: 440 KCGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFE-----------DMTEG 488
Query: 262 YLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKA 316
G P+++ + L+SAC EG + +++A
Sbjct: 489 --------------------GFKPDEITFMALLSACRHRGLVLEGEKYFKSMIEA 523
Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 120/267 (44%), Gaps = 45/267 (16%)
Query: 305 EGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFI 364
+G H +K+G +++ Y+ G + AR F+ ++ ++ SWNA+IA ++
Sbjct: 6 DGFLHHIRSIKSGSTLTAVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYV 65
Query: 365 RNGMIEDARQLFNNMQ-KRDVYSWSAMISGYAQNEQ-PNMALELF---HGMVDAGVKPNE 419
+ +++AR+LF + +RD+ +++ ++SG+A+ + + A+E+F H + ++
Sbjct: 66 KFNNVKEARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDD 125
Query: 420 ITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAI---IDMYAKCGS------- 469
T+ ++ A + G H ++ T ND A+ I MY+KCG
Sbjct: 126 FTVTTMVKLSAKLTNVFYGEQLHGVLVK---TGNDGTKFAVSSLIHMYSKCGKFKEVCNI 182
Query: 470 --------------------------INTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDA 503
I+ A VF+ + ++S WN +I G A +G
Sbjct: 183 FNGSCVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTIS-WNTLIAGYAQNGYE 241
Query: 504 NLTLKIYSDLEKRNIKLNSITFIGVLS 530
LK+ +E+ +K + +F VL+
Sbjct: 242 EEALKMAVSMEENGLKWDEHSFGAVLN 268
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 102/240 (42%), Gaps = 42/240 (17%)
Query: 15 ANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLI 74
AN N+ L +VS L CS + G++IH ++G+ + + + +++Y+KCG +
Sbjct: 385 ANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNV 444
Query: 75 SQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQND 134
A+ +FDS D V Y +MI G A +
Sbjct: 445 EYAERIFDSSFERDTVM-------------------------------YNAMIAGCAHHG 473
Query: 135 CWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIIS- 193
++ + F DM G P+E+T +++S+ H G + E K MI+ + I
Sbjct: 474 HEAKSFQHFEDMTEGGFKPDEITFMALLSACRHRGLVLEGEKY----FKSMIEAYNISPE 529
Query: 194 ----TNLLNMYCVCSSLVEARSLFD--EMKERNIVSWNVMLNGFAKAGLVELARELFERI 247
T ++++Y L +A L + + E++ V LN + EL +E+ E++
Sbjct: 530 TGHYTCMIDLYGKAYRLDKAIELMEGIDQVEKDAVILGAFLNACSWNKNTELVKEVEEKL 589
>sp|Q9S7F4|PP206_ARATH Putative pentatricopeptide repeat-containing protein At2g01510
OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1
Length = 825
Score = 304 bits (779), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 193/671 (28%), Positives = 340/671 (50%), Gaps = 56/671 (8%)
Query: 43 QQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRN 102
+++ + I K+G +++T N ++ + G +S A+ ++D + V+ N MISG+++
Sbjct: 33 RRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKT 92
Query: 103 DRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDM--RILGVIPNEVTLAS 160
++ AR++FD P + V++T ++ +A+N + EA ++FR M +P+ VT +
Sbjct: 93 GDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTT 152
Query: 161 VISSSVHLGGIWECRMLHGLVIKLMIDG--FVIISTNLLNMYCVCSSLVEARSLFDEMKE 218
++ +H +KL D F+ +S LL YC L A LF+E+ E
Sbjct: 153 LLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPE 212
Query: 219 RNIVSWNVMLNGFAKAGLVELARELFERIP------------------------------ 248
++ V++N ++ G+ K GL + LF ++
Sbjct: 213 KDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQL 272
Query: 249 ---------SKDVVSWGTMIDGYLQVERLSEALTMYRAML-CDGIAPNDVMIVDLISACG 298
S+D ++D Y + +R+ E ++ M D ++ N V IS+
Sbjct: 273 HALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVV-----ISSYS 327
Query: 299 RAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLAR---LQFELGIKDHIAS 355
+A + L + GFD +F AT++ A + + R Q L D I
Sbjct: 328 QADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILH 387
Query: 356 -WNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAG 414
N+L+ + + M E+A +F ++ +R SW+A+ISGY Q L+LF M +
Sbjct: 388 VGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSN 447
Query: 415 VKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAF 474
++ ++ T +V A AS +L G+ H +++ + N + ++DMYAKCGSI A
Sbjct: 448 LRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAV 507
Query: 475 EVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCH 534
+VF + DR +VS WNA+I A +GD + ++ + + ++ +S++ +GVL+ C H
Sbjct: 508 QVFEEMPDR-NAVS-WNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSH 565
Query: 535 AGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWG 594
G V+ G YF++M +Y + P KHY CM+DLLGR G+ +AE+++ MP + D ++W
Sbjct: 566 CGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWS 625
Query: 595 TLLAASRIHGNVEVGERAAKSLAGLQP-SHGPSRVLLSNIYADAGRWEDAFSIRKEMRDC 653
++L A RIH N + ERAA+ L ++ + V +SNIYA AG WE ++K MR+
Sbjct: 626 SVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRER 685
Query: 654 GMKRLPGFSGV 664
G+K++P +S V
Sbjct: 686 GIKKVPAYSWV 696
Score = 80.9 bits (198), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 80/385 (20%), Positives = 157/385 (40%), Gaps = 68/385 (17%)
Query: 38 AVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMIS 97
++ G+Q+H + +S + NSL+++YAKC + +A+ +F S V+ +IS
Sbjct: 366 SLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALIS 425
Query: 98 GYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVT 157
GY+ Q L++F MR + ++ T
Sbjct: 426 GYV-------------------------------QKGLHGAGLKLFTKMRGSNLRADQST 454
Query: 158 LASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMK 217
A+V+ +S + + LH +I+ V + L++MY C S+ +A +F+EM
Sbjct: 455 FATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMP 514
Query: 218 ERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRA 277
+RN VSWN +++ A G DG A+ +
Sbjct: 515 DRNAVSWNALISAHADNG------------------------DG-------EAAIGAFAK 543
Query: 278 MLCDGIAPNDVMIVDLISACGRAMAFGEGLQ-IHSIIVKAGFDCYDFIQATIIHFYAACG 336
M+ G+ P+ V I+ +++AC +G + ++ G A ++ G
Sbjct: 544 MIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNG 603
Query: 337 RINLA-RLQFELGIKDHIASWNALIAG--FIRNGMIED--ARQLFNNMQKRDVYSWSAMI 391
R A +L E+ + W++++ +N + + A +LF+ + RD ++ +M
Sbjct: 604 RFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMS 663
Query: 392 SGYAQNEQPNMALELFHGMVDAGVK 416
+ YA + ++ M + G+K
Sbjct: 664 NIYAAAGEWEKVRDVKKAMRERGIK 688
Score = 54.3 bits (129), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 110/275 (40%), Gaps = 39/275 (14%)
Query: 15 ANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLI 74
+NL+ A V L+ ++ ++ G+Q+H+ I +SG N F + L+++YAKCG I
Sbjct: 446 SNLRADQSTFATV--LKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSI 503
Query: 75 SQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQND 134
A +F ++ P + VS+ ++I A N
Sbjct: 504 KDAVQVF-------------------------------EEMPDRNAVSWNALISAHADNG 532
Query: 135 CWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWE-CRMLHGLVIKLMIDGFVIIS 193
A+ F M G+ P+ V++ V+++ H G + + + I
Sbjct: 533 DGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHY 592
Query: 194 TNLLNMYCVCSSLVEARSLFDEMK-ERNIVSWNVMLNG---FAKAGLVELARE-LFERIP 248
+L++ EA L DEM E + + W+ +LN L E A E LF
Sbjct: 593 ACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEK 652
Query: 249 SKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGI 283
+D ++ +M + Y + + +AM GI
Sbjct: 653 LRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGI 687
>sp|Q9FLZ9|PP405_ARATH Pentatricopeptide repeat-containing protein At5g39350
OS=Arabidopsis thaliana GN=PCMP-E16 PE=2 SV=1
Length = 677
Score = 304 bits (779), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 186/625 (29%), Positives = 301/625 (48%), Gaps = 95/625 (15%)
Query: 42 GQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIR 101
G +H I +S + ++QN+L+ +Y G + A+ +FD D ++ N MISGY R
Sbjct: 136 GLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYR 195
Query: 102 NDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASV 161
N +NDA +FD W M V + T+ S+
Sbjct: 196 NGYMNDALMMFD----------------------W---------MVNESVDLDHATIVSM 224
Query: 162 ISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNI 221
+ HL + R +H LV + + + + L+NMY C + EAR +FD M+ R++
Sbjct: 225 LPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDV 284
Query: 222 VSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCD 281
++W M+NG+ + G VE AL + R M +
Sbjct: 285 ITWTCMINGYTEDGDVE-------------------------------NALELCRLMQFE 313
Query: 282 GIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLA 341
G+ PN V I L+S CG A+ +G +H V+ I+ ++I YA C R++L
Sbjct: 314 GVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLC 373
Query: 342 RLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPN 401
F K H W+A+IAG ++N ++ DA LF M++ DV +PN
Sbjct: 374 FRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDV--------------EPN 419
Query: 402 MALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAII 461
+A T+ S+ A A+ L++ H Y+ + + + ++
Sbjct: 420 IA-----------------TLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLV 462
Query: 462 DMYAKCGSINTAFEVFYHIRDRTTS--VSPWNAIICGLAMHGDANLTLKIYSDLEKRNIK 519
+Y+KCG++ +A ++F I+++ S V W A+I G MHGD + L+++ ++ + +
Sbjct: 463 HVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVT 522
Query: 520 LNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEE 579
N ITF L+ C H+GLV+ G F+ M Y HY C+VDLLGRAG+L++A
Sbjct: 523 PNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYN 582
Query: 580 VIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGR 639
+I ++P + +WG LLAA H NV++GE AA L L+P + + VLL+NIYA GR
Sbjct: 583 LITTIPFEPTSTVWGALLAACVTHENVQLGEMAANKLFELEPENTGNYVLLANIYAALGR 642
Query: 640 WEDAFSIRKEMRDCGMKRLPGFSGV 664
W+D +R M + G+++ PG S +
Sbjct: 643 WKDMEKVRSMMENVGLRKKPGHSTI 667
Score = 145 bits (367), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 119/486 (24%), Positives = 201/486 (41%), Gaps = 99/486 (20%)
Query: 25 ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSC 84
+VS L C + G+ +H L+ + L ++N+L+N+Y KCG + +A+ +FD
Sbjct: 220 TIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRM 279
Query: 85 STLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFR 144
D + MI+GY + G +N ALE+ R
Sbjct: 280 ERRDVITWTCMINGYTED--------------------------GDVEN-----ALELCR 308
Query: 145 DMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCS 204
M+ GV PN VT+AS++S + + + LHG ++ + +II T+L++MY C
Sbjct: 309 LMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCK 368
Query: 205 SLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQ 264
+ +F + + W+ ++ G + LV A LF+R+ +DV
Sbjct: 369 RVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDV------------ 416
Query: 265 VERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFI 324
PN + L+ A + + IH + K GF
Sbjct: 417 -------------------EPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDA 457
Query: 325 QATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQK--- 381
++H Y+ CG + E A ++FN +Q+
Sbjct: 458 ATGLVHVYSKCGTL-------------------------------ESAHKIFNGIQEKHK 486
Query: 382 -RDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRW 440
+DV W A+ISGY + + AL++F MV +GV PNEIT S A + SG ++EG
Sbjct: 487 SKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLT 546
Query: 441 AHEYVLNNSITL-NDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAM 499
++L + TL N I+D+ + G ++ A+ + I TS + W A++
Sbjct: 547 LFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTS-TVWGALLAACVT 605
Query: 500 HGDANL 505
H + L
Sbjct: 606 HENVQL 611
Score = 107 bits (267), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/353 (23%), Positives = 160/353 (45%), Gaps = 38/353 (10%)
Query: 195 NLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLN---GFAKAGLVELARELFERIPSKD 251
+LLN + S+ + ++L + VS +++ +A G + AR+LFE +P
Sbjct: 20 SLLNHFAATQSISKTKALHCHVITGGRVSGHILSTLSVTYALCGHITYARKLFEEMPQSS 79
Query: 252 VVSWGTMIDGYLQVERLSEALTMYRAMLCDGI--APNDVMIVDLISACGRAMAFGEGLQI 309
++S+ +I Y++ +A++++ M+ +G+ P+ + A G + GL +
Sbjct: 80 LLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGLVV 139
Query: 310 HSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMI 369
H I+++ F ++Q ++ Y G++ +AR F++ + SWN +I+G+ RNG +
Sbjct: 140 HGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYM 199
Query: 370 EDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAI 429
DA +F+ W MV+ V + T+VS+
Sbjct: 200 NDALMMFD---------W----------------------MVNESVDLDHATIVSMLPVC 228
Query: 430 ASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSP 489
L+ GR H+ V + + A+++MY KCG ++ A VF + R V
Sbjct: 229 GHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERR--DVIT 286
Query: 490 WNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGE 542
W +I G GD L++ ++ ++ N++T ++S C A V+ G+
Sbjct: 287 WTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGK 339
Score = 79.7 bits (195), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/292 (21%), Positives = 121/292 (41%), Gaps = 58/292 (19%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+ + S + C + V+ G+ +H + + S+ I+ SLI++YAKC + +F
Sbjct: 320 VTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSG 379
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
S + +I+G ++N+ ++D AL +F
Sbjct: 380 ASKYHTGPWSAIIAGCVQNELVSD-------------------------------ALGLF 408
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVC 203
+ MR V PN TL S++ + L + + +H + K + +T L+++Y C
Sbjct: 409 KRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKC 468
Query: 204 SSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYL 263
+L A +F+ ++E++ SKDVV WG +I GY
Sbjct: 469 GTLESAHKIFNGIQEKH---------------------------KSKDVVLWGALISGYG 501
Query: 264 QVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVK 315
AL ++ M+ G+ PN++ ++AC + EGL + +++
Sbjct: 502 MHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLE 553
Score = 72.8 bits (177), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 114/243 (46%), Gaps = 6/243 (2%)
Query: 367 GMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVK--PNEITMVS 424
G I AR+LF M + + S++ +I Y + + A+ +F MV GVK P+ T
Sbjct: 63 GHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPF 122
Query: 425 VFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRT 484
V A ++K G H +L + + + A++ MY G + A +VF +++R
Sbjct: 123 VAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNR- 181
Query: 485 TSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERY 544
V WN +I G +G N L ++ + ++ L+ T + +L C H +++G
Sbjct: 182 -DVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNV 240
Query: 545 FKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHG 604
K ++ + ++ +V++ + G++++A V M + DV+ W ++ G
Sbjct: 241 HKLVEE-KRLGDKIEVKNALVNMYLKCGRMDEARFVFDRME-RRDVITWTCMINGYTEDG 298
Query: 605 NVE 607
+VE
Sbjct: 299 DVE 301
>sp|Q9SJG6|PP200_ARATH Pentatricopeptide repeat-containing protein At2g42920,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-E75 PE=2
SV=1
Length = 559
Score = 304 bits (778), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 162/430 (37%), Positives = 253/430 (58%), Gaps = 16/430 (3%)
Query: 243 LFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDG--IAPNDVMIVDLISACGRA 300
+F RI K+ W T+I G+ + A++++ MLC + P + + A GR
Sbjct: 80 VFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRL 139
Query: 301 MAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACG------RINLARLQFELGIKDHIA 354
+G Q+H +++K G + FI+ T++H Y CG RI L + F+ +
Sbjct: 140 GQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFD------VV 193
Query: 355 SWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAG 414
+WN++I GF + G+I+ A+ LF+ M +R+ SW++MISG+ +N + AL++F M +
Sbjct: 194 AWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKD 253
Query: 415 VKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAF 474
VKP+ TMVS+ A A G ++GRW HEY++ N LN + A+IDMY KCG I
Sbjct: 254 VKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGL 313
Query: 475 EVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCH 534
VF + +S WN++I GLA +G + ++S+LE+ ++ +S++FIGVL+ C H
Sbjct: 314 NVFECAPKK--QLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAH 371
Query: 535 AGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWG 594
+G V + +F+ MK Y +EP +KHY MV++LG AG LE+AE +I++MP++ D VIW
Sbjct: 372 SGEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWS 431
Query: 595 TLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCG 654
+LL+A R GNVE+ +RAAK L L P VLLSN YA G +E+A R M++
Sbjct: 432 SLLSACRKIGNVEMAKRAAKCLKKLDPDETCGYVLLSNAYASYGLFEEAVEQRLLMKERQ 491
Query: 655 MKRLPGFSGV 664
M++ G S +
Sbjct: 492 MEKEVGCSSI 501
Score = 164 bits (414), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 108/376 (28%), Positives = 188/376 (50%), Gaps = 10/376 (2%)
Query: 105 LNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDM--RILGVIPNEVTLASVI 162
+N A VF + K + ++I GF+++ A+ +F DM V P +T SV
Sbjct: 74 MNYAYLVFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVF 133
Query: 163 SSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIV 222
+ LG + R LHG+VIK ++ I +L+MY C L+EA +F M ++V
Sbjct: 134 KAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVV 193
Query: 223 SWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDG 282
+WN M+ GFAK GL++ A+ LF+ +P ++ VSW +MI G+++ R +AL M+R M
Sbjct: 194 AWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKD 253
Query: 283 IAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLAR 342
+ P+ +V L++AC A +G IH IV+ F+ + +I Y CG I
Sbjct: 254 VKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGL 313
Query: 343 LQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKR----DVYSWSAMISGYAQNE 398
FE K ++ WN++I G NG E A LF+ +++ D S+ +++ A +
Sbjct: 314 NVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSG 373
Query: 399 QPNMALELFHGMVDA-GVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLS 457
+ + A E F M + ++P+ + + +G L+E A + N + + +
Sbjct: 374 EVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEE---AEALIKNMPVEEDTVIW 430
Query: 458 AAIIDMYAKCGSINTA 473
++++ K G++ A
Sbjct: 431 SSLLSACRKIGNVEMA 446
Score = 137 bits (346), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/353 (26%), Positives = 169/353 (47%), Gaps = 62/353 (17%)
Query: 42 GQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIR 101
G+Q+H ++ K GLE ++FI+N+++++Y CG + +A +F D VA N MI G+ +
Sbjct: 145 GRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAK 204
Query: 102 NDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASV 161
++ A+ +FD+ P + VS+ SMI GF +N +++AL++FR+M+ V P+ T+ S+
Sbjct: 205 CGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSL 264
Query: 162 ISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNI 221
+++ +LG + R +H +++ + I+ T L++MYC C + E ++F+ ++ +
Sbjct: 265 LNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQL 324
Query: 222 VSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCD 281
WN M+ G A G E A +LF ++ER
Sbjct: 325 SCWNSMILGLANNGFEERAMDLFS------------------ELER-------------S 353
Query: 282 GIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLA 341
G+ P+ V + +++AC + GE +H R+
Sbjct: 354 GLEPDSVSFIGVLTACAHS---GE-----------------------VHRADEFFRLMKE 387
Query: 342 RLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ-KRDVYSWSAMISG 393
+ E IK + N L G++E+A L NM + D WS+++S
Sbjct: 388 KYMIEPSIKHYTLMVNVLGGA----GLLEEAEALIKNMPVEEDTVIWSSLLSA 436
Score = 72.4 bits (176), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 100/220 (45%), Gaps = 33/220 (15%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+VS L C+ A QG+ IH I ++ E N+ + +LI++Y KCG I + ++F+
Sbjct: 259 FTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFE- 317
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
C+ ++C + SMI+G A N A+++F
Sbjct: 318 CAPKKQLSC------------------------------WNSMILGLANNGFEERAMDLF 347
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVI-KLMIDGFVIISTNLLNMYCV 202
++ G+ P+ V+ V+++ H G + L+ K MI+ + T ++N+
Sbjct: 348 SELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGG 407
Query: 203 CSSLVEARSLFDEMK-ERNIVSWNVMLNGFAKAGLVELAR 241
L EA +L M E + V W+ +L+ K G VE+A+
Sbjct: 408 AGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMAK 447
>sp|Q9MA95|PP214_ARATH Putative pentatricopeptide repeat-containing protein At3g05240
OS=Arabidopsis thaliana GN=PCMP-E82 PE=3 SV=2
Length = 565
Score = 303 bits (776), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 197/640 (30%), Positives = 311/640 (48%), Gaps = 88/640 (13%)
Query: 26 LVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCS 85
++S L C + + ++Q +H L+ KS + N + LI+ C
Sbjct: 9 ILSQLENCRSLVELNQ---LHGLMIKSSVIRNVIPLSRLIDFCTTC-------------- 51
Query: 86 TLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRD 145
P N L+ AR VF+ + SMI G++ + +AL +++
Sbjct: 52 ---PETMN-----------LSYARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQE 97
Query: 146 MRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSS 205
M G P+ T V+ + L I +HG V+K + + +ST LL+MY C
Sbjct: 98 MLRKGYSPDYFTFPYVLKACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCC-- 155
Query: 206 LVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQV 265
G V +FE IP +VV+WG++I G++
Sbjct: 156 -----------------------------GEVNYGLRVFEDIPQWNVVAWGSLISGFVNN 186
Query: 266 ERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQ 325
R S+A+ +R M +G+ N+ ++VDL+ ACGR G H + GFD Y
Sbjct: 187 NRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPY---- 242
Query: 326 ATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVY 385
Q ++G +A+ +LI + + G + AR LF+ M +R +
Sbjct: 243 -----------------FQSKVGFNVILAT--SLIDMYAKCGDLRTARYLFDGMPERTLV 283
Query: 386 SWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYV 445
SW+++I+GY+QN AL +F M+D G+ P+++T +SV A G + G+ H YV
Sbjct: 284 SWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYV 343
Query: 446 LNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANL 505
+ + A+++MYAK G +A + F + + T W +I GLA HG N
Sbjct: 344 SKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIA--WTVVIIGLASHGHGNE 401
Query: 506 TLKIYSDL-EKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCM 564
L I+ + EK N + IT++GVL C H GLV+ G+RYF M+ ++ +EP ++HYGCM
Sbjct: 402 ALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCM 461
Query: 565 VDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHG 624
VD+L RAG+ E+AE ++++MP+K +V IWG LL IH N+E+ +R +A +
Sbjct: 462 VDILSRAGRFEEAERLVKTMPVKPNVNIWGALLNGCDIHENLELTDRIRSMVAEPEELGS 521
Query: 625 PSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
VLLSNIYA AGRW D IR+ M+ + ++ G S V
Sbjct: 522 GIYVLLSNIYAKAGRWADVKLIRESMKSKRVDKVLGHSSV 561
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 92/248 (37%), Gaps = 77/248 (31%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
++ +S +R GQ IH+ + K+G + I +L+N+YAK G AK F+
Sbjct: 317 KVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFE 376
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
D +A +T +I+G A + EAL +
Sbjct: 377 DLEKKDTIA-------------------------------WTVVIIGLASHGHGNEALSI 405
Query: 143 FRDMRILG-VIPNEVTLASVISSSVHLGGI-------WECRMLHGLVIKLMIDGFVIIST 194
F+ M+ G P+ +T V+ + H+G + E R LHGL
Sbjct: 406 FQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGL-------------- 451
Query: 195 NLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVS 254
E + + M++ ++AG E A L + +P K V+
Sbjct: 452 -----------------------EPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVN 488
Query: 255 -WGTMIDG 261
WG +++G
Sbjct: 489 IWGALLNG 496
>sp|Q9M2Y7|PP274_ARATH Pentatricopeptide repeat-containing protein At3g49710
OS=Arabidopsis thaliana GN=PCMP-H79 PE=2 SV=1
Length = 721
Score = 302 bits (773), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 191/627 (30%), Positives = 314/627 (50%), Gaps = 68/627 (10%)
Query: 42 GQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIR 101
G+ +H+L KS + S+T++ N +NLY+KCG +S A++ F S + + N+++ Y +
Sbjct: 27 GKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKAYAK 86
Query: 102 NDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASV 161
+ +++ AR++FD+ P VSY ++I G+A A+ +F+ MR LG + TL+ +
Sbjct: 87 DSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGL 146
Query: 162 ISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNI 221
I++ + + LH + D + ++ + Y L EA S+F
Sbjct: 147 IAACCDRVDL--IKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVF-------- 196
Query: 222 VSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCD 281
G+ EL +D VSW +MI Y Q + ++AL +Y+ M+
Sbjct: 197 ------------YGMDEL----------RDEVSWNSMIVAYGQHKEGAKALALYKEMIFK 234
Query: 282 GIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLA 341
G + + +++A G Q H ++KAGF + + +I FY+ CG +
Sbjct: 235 GFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCD-- 292
Query: 342 RLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQ-P 400
GM D+ ++F + D+ W+ MISGY+ NE+
Sbjct: 293 -------------------------GMY-DSEKVFQEILSPDLVVWNTMISGYSMNEELS 326
Query: 401 NMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLND-NLSAA 459
A++ F M G +P++ + V V A ++ + + + H + + I N +++ A
Sbjct: 327 EEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNA 386
Query: 460 IIDMYAKCGSINTAFEVFYHIRDRTTSVSP--WNAIICGLAMHGDANLTLKIYSDLEKRN 517
+I +Y K G++ A VF DR ++ +N +I G A HG L +Y +
Sbjct: 387 LISLYYKSGNLQDARWVF----DRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSG 442
Query: 518 IKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDA 577
I N ITF+ VLS C H G VD G+ YF +MK + +EP+ +HY CM+DLLGRAG+LE+A
Sbjct: 443 IAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEA 502
Query: 578 EEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADA 637
E I +MP K V W LL A R H N+ + ERAA L +QP V+L+N+YADA
Sbjct: 503 ERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQPLAATPYVMLANMYADA 562
Query: 638 GRWEDAFSIRKEMRDCGMKRLPGFSGV 664
+WE+ S+RK MR +++ PG S +
Sbjct: 563 RKWEEMASVRKSMRGKRIRKKPGCSWI 589
Score = 151 bits (382), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 110/454 (24%), Positives = 204/454 (44%), Gaps = 41/454 (9%)
Query: 157 TLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEM 216
T ++ SV ++ + LH L +K ++ +S + +N+Y C L AR+ F
Sbjct: 10 TFRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYST 69
Query: 217 KERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYR 276
+E N+ S+NV++ +AK + +AR+LF+ IP D VS+ T+I GY A+ +++
Sbjct: 70 EEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFK 129
Query: 277 AMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACG 336
M G + + LI+AC + + Q+H V GFD Y +
Sbjct: 130 RMRKLGFEVDGFTLSGLIAACCDRVDLIK--QLHCFSVSGGFDSYSSVN----------- 176
Query: 337 RINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQK-RDVYSWSAMISGYA 395
NA + + + G++ +A +F M + RD SW++MI Y
Sbjct: 177 --------------------NAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYG 216
Query: 396 QNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDN 455
Q+++ AL L+ M+ G K + T+ SV A+ S L GR H ++ N +
Sbjct: 217 QHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSH 276
Query: 456 LSAAIIDMYAKCGSINTAFE---VFYHIRDRTTSVSPWNAIICGLAMHGD-ANLTLKIYS 511
+ + +ID Y+KCG + ++ VF I V WN +I G +M+ + + +K +
Sbjct: 277 VGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVV--WNTMISGYSMNEELSEEAVKSFR 334
Query: 512 DLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRA 571
+++ + + +F+ V S C + ++ + + ++ L ++
Sbjct: 335 QMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKS 394
Query: 572 GQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGN 605
G L+DA V MP + + V + ++ HG+
Sbjct: 395 GNLQDARWVFDRMP-ELNAVSFNCMIKGYAQHGH 427
Score = 64.3 bits (155), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 108/276 (39%), Gaps = 83/276 (30%)
Query: 33 CSAHIAVSQGQQIHSLIFKSGLESNTF-IQNSLINLYAKCGLISQAKSMFDSCSTLDPVA 91
CS + SQ +QIH L KS + SN + N+LI+LY K G + A+ +FD L+ V+
Sbjct: 355 CSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVS 414
Query: 92 CNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGV 151
N MI GY AQ+ EAL +++ M G+
Sbjct: 415 FNCMIKGY-------------------------------AQHGHGTEALLLYQRMLDSGI 443
Query: 152 IPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARS 211
PN++T +V+S+ H C + E +
Sbjct: 444 APNKITFVAVLSACAH-----------------------------------CGKVDEGQE 468
Query: 212 LFDEMKERNIVS-----WNVMLNGFAKAGLVELARELFERIPSKD-VVSWGTMIDGYLQV 265
F+ MKE + ++ M++ +AG +E A + +P K V+W ++
Sbjct: 469 YFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLG----- 523
Query: 266 ERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAM 301
A ++ M A N++M++ ++A M
Sbjct: 524 -----ACRKHKNMALAERAANELMVMQPLAATPYVM 554
>sp|Q9SV26|PP297_ARATH Pentatricopeptide repeat-containing protein At4g01030,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H65 PE=3
SV=2
Length = 768
Score = 301 bits (772), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 172/598 (28%), Positives = 315/598 (52%), Gaps = 47/598 (7%)
Query: 99 YIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTL 158
Y R L A ++FD+ P + +++ ++M ++ W +A+E+FR+M+ G + T+
Sbjct: 33 YGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTM 92
Query: 159 ASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKE 218
++ + G E R +HG V++L ++ V + +L+ MY L +R +F+ MK+
Sbjct: 93 VKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKD 152
Query: 219 RNIVSWNVMLNGFAKAGLVELARELFERIP----SKDVVSWGTMIDGYLQVERLSEALTM 274
RN+ SWN +L+ + K G V+ A L + + D+V+W +++ GY +A+ +
Sbjct: 153 RNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAV 212
Query: 275 YRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD-FIQATIIHFYA 333
+ M G+ P+ I L+ A G IH I++ YD +++ T+I Y
Sbjct: 213 LKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQL-WYDVYVETTLIDMYI 271
Query: 334 ACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKR----DVYSWSA 389
G + AR+ F++ +I +WN+L++G +++DA L M+K D +W++
Sbjct: 272 KTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNS 331
Query: 390 MISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGT--------------- 434
+ SGYA +P AL++ M + GV PN ++ ++F + +G
Sbjct: 332 LASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEG 391
Query: 435 --------------------LKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAF 474
L G+ H + L ++ + ++ A++DMY K G + +A
Sbjct: 392 VGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAI 451
Query: 475 EVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCH 534
E+F+ I+++ S++ WN ++ G AM G + +S + + ++ ++ITF VLS C +
Sbjct: 452 EIFWGIKNK--SLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKN 509
Query: 535 AGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWG 594
+GLV G +YF M+S Y + P ++H CMVDLLGR+G L++A + I++M +K D IWG
Sbjct: 510 SGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMSLKPDATIWG 569
Query: 595 TLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRD 652
L++ +IH ++E+ E A K L L+P + + +++ N+Y++ RWED IR MR+
Sbjct: 570 AFLSSCKIHRDLELAEIAWKRLQVLEPHNSANYMMMINLYSNLNRWEDVERIRNLMRN 627
Score = 181 bits (458), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 122/504 (24%), Positives = 255/504 (50%), Gaps = 28/504 (5%)
Query: 22 YELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMF 81
Y+ +V L+ CS ++G+QIH + + GLESN + NSLI +Y++ G + ++ +F
Sbjct: 88 YDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVF 147
Query: 82 DSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPI----KCCVSYTSMIMGFAQNDCWR 137
+S + + N ++S Y + ++DA + D+ I V++ S++ G+A +
Sbjct: 148 NSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSK 207
Query: 138 EALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLL 197
+A+ V + M+I G+ P+ +++S++ + G + + +HG +++ + V + T L+
Sbjct: 208 DAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLI 267
Query: 198 NMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSK----DVV 253
+MY L AR +FD M +NIV+WN +++G + A L++ A L R+ + D +
Sbjct: 268 DMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAI 327
Query: 254 SWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSII 313
+W ++ GY + + +AL + M G+APN V + S C + F L++ +
Sbjct: 328 TWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKM 387
Query: 314 VKAGFDCYDFIQATIIHFYAACGRINLAR------LQFELGIKDHIASWNALIAGFIRNG 367
+ G +T++ ++ + L+ L ++A+ AL+ + ++G
Sbjct: 388 QEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVAT--ALVDMYGKSG 445
Query: 368 MIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFC 427
++ A ++F ++ + + SW+ M+ GYA + + F M++AG++P+ IT SV
Sbjct: 446 DLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLS 505
Query: 428 AIASSGTLKEGRWAHEYVLNNSITLNDNLS--AAIIDMYAKCGSINTAFEVFYHIRDRTT 485
+SG ++EG W + ++ + + + + ++D+ + G ++ A++ +T
Sbjct: 506 VCKNSGLVQEG-WKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFI-----QTM 559
Query: 486 SVSP----WNAIICGLAMHGDANL 505
S+ P W A + +H D L
Sbjct: 560 SLKPDATIWGAFLSSCKIHRDLEL 583
Score = 139 bits (350), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 123/520 (23%), Positives = 214/520 (41%), Gaps = 108/520 (20%)
Query: 177 LHGLVIKLMIDGF-VIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAG 235
+HG +IK +D + + + Y C SL A LFDEM +R+ ++WN ++ ++G
Sbjct: 9 IHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNLRSG 68
Query: 236 LVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLIS 295
E A ELF R M G D +V L+
Sbjct: 69 NWEKAVELF-------------------------------REMQFSGAKAYDSTMVKLLQ 97
Query: 296 ACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIAS 355
C F EG QIH +++ G + + ++I Y+ G++ L+R F +++S
Sbjct: 98 VCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSS 157
Query: 356 WNALIAGFIRNGMIEDARQLFNNMQ----KRDVYSWSAMISGYAQNEQPNMALELFHGMV 411
WN++++ + + G ++DA L + M+ K D+ +W++++SGYA A+ + M
Sbjct: 158 WNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQ 217
Query: 412 DAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSIN 471
AG+KP+ ++ S+ A+A G LK G+ H Y+L N + + + +IDMY K G +
Sbjct: 218 IAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLP 277
Query: 472 TAFEVF-----------------------------YHIRDRTTSVSP----WNAIICGLA 498
A VF IR + P WN++ G A
Sbjct: 278 YARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYA 337
Query: 499 MHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPD- 557
G L + ++++ + N +++ + S C G + F M+ V P+
Sbjct: 338 TLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQE-EGVGPNA 396
Query: 558 ------LKHYGC----------------------------MVDLLGRAGQLEDAEEVIRS 583
LK GC +VD+ G++G L+ A E+
Sbjct: 397 ATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWG 456
Query: 584 MPMKADVVIWGTLLAASRIHGNVEVGERAAKSL--AGLQP 621
+ K+ + W +L + G E G A + AG++P
Sbjct: 457 IKNKS-LASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEP 495
Score = 43.5 bits (101), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 95/213 (44%), Gaps = 10/213 (4%)
Query: 446 LNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANL 505
L+NS T + +A + Y +C S+ A ++F + R WN I+ G+
Sbjct: 18 LDNSDT---RVVSASMGFYGRCVSLGFANKLFDEMPKRDDLA--WNEIVMVNLRSGNWEK 72
Query: 506 TLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMV 565
++++ +++ K T + +L C + G R +E ++ ++
Sbjct: 73 AVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEG-RQIHGYVLRLGLESNVSMCNSLI 131
Query: 566 DLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVE--VGERAAKSLAGLQPSH 623
+ R G+LE + +V SM + ++ W ++L++ G V+ +G + GL+P
Sbjct: 132 VMYSRNGKLELSRKVFNSMKDR-NLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDI 190
Query: 624 GPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMK 656
LLS YA G +DA ++ K M+ G+K
Sbjct: 191 VTWNSLLSG-YASKGLSKDAIAVLKRMQIAGLK 222
>sp|Q9FMA1|PP433_ARATH Pentatricopeptide repeat-containing protein At5g56310
OS=Arabidopsis thaliana GN=PCMP-E13 PE=2 SV=1
Length = 530
Score = 301 bits (772), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 167/443 (37%), Positives = 265/443 (59%), Gaps = 17/443 (3%)
Query: 232 AKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERL---SEALTMYRAMLCDGIAPNDV 288
+ AG + A +F P + TMI ++ S A+T+YR + P+
Sbjct: 58 SNAGHLRYAYSVFTHQPCPNTYLHNTMIRALSLLDEPNAHSIAITVYRKLWALCAKPDTF 117
Query: 289 MIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQF-EL 347
++ R G QIH +V GFD + +I Y +CG + AR F E+
Sbjct: 118 TFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEM 177
Query: 348 GIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ--KRDVYSWSAMISGYAQNEQPNMALE 405
+KD + WNAL+AG+ + G +++AR L M R+ SW+ +ISGYA++ + + A+E
Sbjct: 178 LVKD-VNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIE 236
Query: 406 LFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYV----LNNSITLNDNLSAAII 461
+F M+ V+P+E+T+++V A A G+L+ G YV +N +++LN+ A+I
Sbjct: 237 VFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNN----AVI 292
Query: 462 DMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLN 521
DMYAK G+I A +VF + +R +V W II GLA HG L +++ + K ++ N
Sbjct: 293 DMYAKSGNITKALDVFECVNER--NVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPN 350
Query: 522 SITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVI 581
+TFI +LS C H G VDLG+R F SM+S Y + P+++HYGCM+DLLGRAG+L +A+EVI
Sbjct: 351 DVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVI 410
Query: 582 RSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWE 641
+SMP KA+ IWG+LLAAS +H ++E+GERA L L+P++ + +LL+N+Y++ GRW+
Sbjct: 411 KSMPFKANAAIWGSLLAASNVHHDLELGERALSELIKLEPNNSGNYMLLANLYSNLGRWD 470
Query: 642 DAFSIRKEMRDCGMKRLPGFSGV 664
++ +R M+ G+K++ G S +
Sbjct: 471 ESRMMRNMMKGIGVKKMAGESSI 493
Score = 153 bits (386), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 125/494 (25%), Positives = 218/494 (44%), Gaps = 70/494 (14%)
Query: 43 QQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRN 102
Q+I++L SGL N F+ + K ++ TL C ++I+G R
Sbjct: 3 QRINALSLSSGL--NWFV--------------TSLKIHGNNLKTLKQSHCYMIITGLNR- 45
Query: 103 DRLNDAR---------------EVFDKTPIKCCVSYTSMIMGFA---QNDCWREALEVFR 144
D LN A+ VF P + +MI + + + A+ V+R
Sbjct: 46 DNLNVAKFIEACSNAGHLRYAYSVFTHQPCPNTYLHNTMIRALSLLDEPNAHSIAITVYR 105
Query: 145 DMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCS 204
+ L P+ T V+ +V + +W R +HG V+ D V + T L+ MY C
Sbjct: 106 KLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCG 165
Query: 205 SLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPS--KDVVSWGTMIDGY 262
L +AR +FDEM +++ WN +L G+ K G ++ AR L E +P ++ VSW +I GY
Sbjct: 166 GLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGY 225
Query: 263 LQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD 322
+ R SEA+ +++ ML + + P++V ++ ++SAC + G +I S + G +
Sbjct: 226 AKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAV 285
Query: 323 FIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKR 382
+ +I YA G I A FE + ++ +W +IAG +G +A +FN
Sbjct: 286 SLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNR---- 341
Query: 383 DVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAH 442
MV AGV+PN++T +++ A + G + G+
Sbjct: 342 ---------------------------MVKAGVRPNDVTFIAILSACSHVGWVDLGKRLF 374
Query: 443 EYVLNN-SITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHG 501
+ + I N +ID+ + G + A EV + + + + W +++ +H
Sbjct: 375 NSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANA-AIWGSLLAASNVHH 433
Query: 502 DANLTLKIYSDLEK 515
D L + S+L K
Sbjct: 434 DLELGERALSELIK 447
Score = 113 bits (282), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 128/258 (49%), Gaps = 33/258 (12%)
Query: 42 GQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIR 101
G+QIH + G +S+ + LI +Y CG + A+ MFD D N +++GY +
Sbjct: 135 GRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGK 194
Query: 102 NDRLNDAREVFDKTP--IKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLA 159
+++AR + + P ++ VS+T +I G+A++ EA+EVF+ M + V P+EVTL
Sbjct: 195 VGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLL 254
Query: 160 SVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKER 219
+V+S+ LG + + V ++ V ++ +++MY ++ +A +F+ + ER
Sbjct: 255 AVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNER 314
Query: 220 NIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAML 279
N+V+W ++ G A G +EAL M+ M+
Sbjct: 315 NVVTWTTIIAGLATHG-------------------------------HGAEALAMFNRMV 343
Query: 280 CDGIAPNDVMIVDLISAC 297
G+ PNDV + ++SAC
Sbjct: 344 KAGVRPNDVTFIAILSAC 361
Score = 53.9 bits (128), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 103/243 (42%), Gaps = 72/243 (29%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
E+ L++ L C+ ++ G++I S + G+ + N++I++YAK G I++A +F+
Sbjct: 250 EVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFE 309
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+ RN V++T++I G A + EAL +
Sbjct: 310 CVNE--------------RN-----------------VVTWTTIIAGLATHGHGAEALAM 338
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
F M GV PN+VT +++S+ H+G W + L
Sbjct: 339 FNRMVKAGVRPNDVTFIAILSACSHVG--W---------VDL------------------ 369
Query: 203 CSSLVEARSLFDEMKER-----NIVSWNVMLNGFAKAGLVELARELFERIPSK-DVVSWG 256
+ LF+ M+ + NI + M++ +AG + A E+ + +P K + WG
Sbjct: 370 ------GKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWG 423
Query: 257 TMI 259
+++
Sbjct: 424 SLL 426
Score = 42.4 bits (98), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 97/224 (43%), Gaps = 18/224 (8%)
Query: 435 LKEGRWAHEYVLNNSITLNDNLSAA-IIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAI 493
LK + +H Y++ + DNL+ A I+ + G + A+ VF H T + N +
Sbjct: 28 LKTLKQSHCYMIITGLN-RDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPNTYLH--NTM 84
Query: 494 ICGLAMHGDAN---LTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKS 550
I L++ + N + + +Y L K ++ TF VL V G R
Sbjct: 85 IRALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFG-RQIHGQVV 143
Query: 551 VYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGE 610
V+ + + ++ + G L DA ++ M +K DV +W LLA G +VGE
Sbjct: 144 VFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVK-DVNVWNALLA-----GYGKVGE 197
Query: 611 -RAAKSLAGLQPSHGPSRVLLSNI---YADAGRWEDAFSIRKEM 650
A+SL + P + V + + YA +GR +A + + M
Sbjct: 198 MDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRM 241
>sp|Q9LNP2|PPR47_ARATH Putative pentatricopeptide repeat-containing protein At1g17630
OS=Arabidopsis thaliana GN=PCMP-E72 PE=3 SV=1
Length = 731
Score = 300 bits (769), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 190/630 (30%), Positives = 319/630 (50%), Gaps = 55/630 (8%)
Query: 37 IAVSQGQQIHS------LIFKSG-LESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDP 89
+ Q +Q+H+ IF+SG L +N LI++YA+ GL+ A+++F++ S +
Sbjct: 67 LTAQQCRQVHAQVLLSDFIFRSGSLAAN------LISVYARLGLLLDARNVFETVSLV-- 118
Query: 90 VACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRIL 149
L+D R + S++ + + ALE++R MR
Sbjct: 119 --------------LLSDLR------------LWNSILKANVSHGLYENALELYRGMRQR 152
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
G+ + L ++ + +LG CR H VI++ + + + LL +Y + +A
Sbjct: 153 GLTGDGYILPLILRACRYLGRFGLCRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDA 212
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSK----DVVSWGTMIDGYLQV 265
+LF EM RN +SWNVM+ GF++ E A ++FE + + D V+W +++ + Q
Sbjct: 213 YNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQC 272
Query: 266 ERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQ 325
+ + L + M G A + + S C A ++H ++K GF+ Y +
Sbjct: 273 GKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSR 332
Query: 326 ATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ----- 380
+IH Y G++ A F I SWN+LI F+ G +++A LF+ ++
Sbjct: 333 NALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHV 392
Query: 381 ---KRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKE 437
K +V +W+++I G + + +LE F M + V N +T+ + A L
Sbjct: 393 CNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCILSICAELPALNL 452
Query: 438 GRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGL 497
GR H +V+ S++ N + A+++MYAKCG ++ VF IRD+ + WN+II G
Sbjct: 453 GREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRDK--DLISWNSIIKGY 510
Query: 498 AMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPD 557
MHG A L ++ + + I + VLS C HAGLV+ G F SM + +EP
Sbjct: 511 GMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGREIFYSMSKRFGLEPQ 570
Query: 558 LKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLA 617
+HY C+VDLLGR G L++A E++++MPM+ V + G LL + R+H NV++ E A L+
Sbjct: 571 QEHYACIVDLLGRVGFLKEASEIVKNMPMEPKVCVLGALLNSCRMHKNVDIAEGIASQLS 630
Query: 618 GLQPSHGPSRVLLSNIYADAGRWEDAFSIR 647
L+P S +LLSNIY+ GRWE++ ++R
Sbjct: 631 VLEPERTGSYMLLSNIYSAGGRWEESANVR 660
Score = 139 bits (351), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 120/515 (23%), Positives = 222/515 (43%), Gaps = 49/515 (9%)
Query: 13 QKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCG 72
++ L Y L L+ LR C + H+ + + GL+ N + N L+ LY K G
Sbjct: 150 RQRGLTGDGYILPLI--LRACRYLGRFGLCRAFHTQVIQIGLKENLHVVNELLTLYPKAG 207
Query: 73 LISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFD---KTPIKC-CVSYTSMIM 128
+ A ++F + ++ N+MI G+ + A ++F+ + K V++TS++
Sbjct: 208 RMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLS 267
Query: 129 GFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDG 188
+Q + + L+ F MR+ G + LA S L + +HG VIK +
Sbjct: 268 CHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGGFEE 327
Query: 189 FVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIP 248
++ L+++Y + +A LF +++ + I SWN ++ F AG ++ A LF +
Sbjct: 328 YLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELE 387
Query: 249 --------SKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRA 300
+VV+W ++I G R ++L +R M + N V I ++S C
Sbjct: 388 EMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCILSICAEL 447
Query: 301 MAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALI 360
A G +IH +++ +Q +++ YA CG ++ L FE + SWN++I
Sbjct: 448 PALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRDKDLISWNSII 507
Query: 361 AGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEI 420
G+ +G E AL +F M+ +G P+ I
Sbjct: 508 KGYGMHGFAEK-------------------------------ALSMFDRMISSGFHPDGI 536
Query: 421 TMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLS--AAIIDMYAKCGSINTAFEVFY 478
+V+V A + +G +++GR Y ++ L A I+D+ + G + A E+
Sbjct: 537 ALVAVLSACSHAGLVEKGREIF-YSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVK 595
Query: 479 HIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDL 513
++ V A++ MH + ++ I S L
Sbjct: 596 NM-PMEPKVCVLGALLNSCRMHKNVDIAEGIASQL 629
>sp|Q9LRV9|PP228_ARATH Pentatricopeptide repeat-containing protein At3g13880
OS=Arabidopsis thaliana GN=PCMP-E89 PE=2 SV=1
Length = 748
Score = 297 bits (761), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 196/664 (29%), Positives = 314/664 (47%), Gaps = 105/664 (15%)
Query: 10 FNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYA 69
+++ANL+ + A AL +C + G+ +H L+ +GL F+ N LI++Y+
Sbjct: 137 LEAREANLKLDKFTYA--GALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYS 194
Query: 70 KCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMG 129
KCG +L+ A +FD+ + VS+ S+I G
Sbjct: 195 KCG-------------------------------KLDQAMSLFDRCDERDQVSWNSLISG 223
Query: 130 FAQNDCWREALEVFRDMRILGVIPNEVTLASVISS---SVHLGGIWECRMLHGLVIKLMI 186
+ + E L + M G+ L SV+ + +++ G I + +H KL +
Sbjct: 224 YVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGM 283
Query: 187 DGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFER 246
+ +++ T LL+MY AK G ++ A +LF
Sbjct: 284 EFDIVVRTALLDMY-------------------------------AKNGSLKEAIKLFSL 312
Query: 247 IPSKDVVSWGTMIDGYLQVERL-----SEALTMYRAMLCDGIAPNDVMIVDLISACGRAM 301
+PSK+VV++ MI G+LQ++ + SEA ++ M G+ P+ ++ AC A
Sbjct: 313 MPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAK 372
Query: 302 AFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIA 361
G QIH++I K F +FI + +I YA G
Sbjct: 373 TLEYGRQIHALICKNNFQSDEFIGSALIELYALMGST----------------------- 409
Query: 362 GFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEIT 421
ED Q F + K+D+ SW++MI + QNEQ A +LF + + ++P E T
Sbjct: 410 --------EDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYT 461
Query: 422 MVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIR 481
+ + A A L G Y + + I ++ + I MYAK G++ A +VF ++
Sbjct: 462 VSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQ 521
Query: 482 DRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLG 541
+ V+ ++A+I LA HG AN L I+ ++ IK N F+GVL CCH GLV G
Sbjct: 522 N--PDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLVTQG 579
Query: 542 ERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASR 601
+YF+ MK+ Y + P+ KH+ C+VDLLGR G+L DAE +I S + V W LL++ R
Sbjct: 580 LKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPVTWRALLSSCR 639
Query: 602 IHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGF 661
++ + +G+R A+ L L+P S VLL NIY D+G A +R+ MRD G+K+ P
Sbjct: 640 VYKDSVIGKRVAERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVRELMRDRGVKKEPAL 699
Query: 662 SGVV 665
S +V
Sbjct: 700 SWIV 703
Score = 114 bits (284), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 107/440 (24%), Positives = 190/440 (43%), Gaps = 73/440 (16%)
Query: 163 SSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIV 222
S SV LG ++ HG +IK ++ + + NLLNMYC C L AR LFD M ERNI+
Sbjct: 60 SGSVVLG-----KLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNII 114
Query: 223 SWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDG 282
S+N +++G+ + G E A ELF + L++++ + A
Sbjct: 115 SFNSLISGYTQMGFYEQAMELFLEAREAN-----------LKLDKFTYA----------- 152
Query: 283 IAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLAR 342
+ CG G +H ++V G F+ +I Y+ CG+++ A
Sbjct: 153 ---------GALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAM 203
Query: 343 LQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNM 402
F+ + SWN+LI+G++R G E+ L M RD + + G
Sbjct: 204 SLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMH-RDGLNLTTYALG--------- 253
Query: 403 ALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIID 462
+++ C + G +++G H Y + + + A++D
Sbjct: 254 ------------------SVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLD 295
Query: 463 MYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGD-----ANLTLKIYSDLEKRN 517
MYAK GS+ A ++F + + +V +NA+I G + ++ K++ D+++R
Sbjct: 296 MYAKNGSLKEAIKLFSLMPSK--NVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRG 353
Query: 518 IKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDA 577
++ + TF VL C A ++ G R ++ N + D +++L G ED
Sbjct: 354 LEPSPSTFSVVLKACSAAKTLEYG-RQIHALICKNNFQSDEFIGSALIELYALMGSTEDG 412
Query: 578 EEVIRSMPMKADVVIWGTLL 597
+ S K D+ W +++
Sbjct: 413 MQCFASTS-KQDIASWTSMI 431
Score = 90.1 bits (222), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 113/234 (48%), Gaps = 13/234 (5%)
Query: 372 ARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIAS 431
ARQLF+ M +R++ S++++ISGY Q A+ELF +A +K ++ T
Sbjct: 101 ARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGE 160
Query: 432 SGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWN 491
L G H V+ N ++ L +IDMY+KCG ++ A +F +R WN
Sbjct: 161 RCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQ--VSWN 218
Query: 492 AIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSV 551
++I G G A L + + + + + L + VL CC ++L E + + ++
Sbjct: 219 SLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACC----INLNEGFIEKGMAI 274
Query: 552 Y------NVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAA 599
+ +E D+ ++D+ + G L++A ++ MP K +VV + +++
Sbjct: 275 HCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSK-NVVTYNAMISG 327
Score = 57.4 bits (137), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 89/185 (48%), Gaps = 9/185 (4%)
Query: 425 VFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRT 484
+F A SG++ G+ AH +++ +S+ L +++MY KC + A ++F + +R
Sbjct: 53 LFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPER- 111
Query: 485 TSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERY 544
++ +N++I G G ++++ + + N+KL+ T+ G L C +DLGE
Sbjct: 112 -NIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGE-L 169
Query: 545 FKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHG 604
+ V + + ++D+ + G+L+ A + + D V W +L I G
Sbjct: 170 LHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDER-DQVSWNSL-----ISG 223
Query: 605 NVEVG 609
V VG
Sbjct: 224 YVRVG 228
>sp|Q9FND7|PP410_ARATH Putative pentatricopeptide repeat-containing protein At5g40405
OS=Arabidopsis thaliana GN=PCMP-H14 PE=3 SV=1
Length = 612
Score = 296 bits (757), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 154/449 (34%), Positives = 255/449 (56%), Gaps = 4/449 (0%)
Query: 216 MKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMY 275
+K+ ++V V + ++ A ++ +R + + +MI + + ++ Y
Sbjct: 35 LKDDHLVGHFVKAVALSDHKYLDYANQILDRSEKPTLFALNSMIRAHCKSPVPEKSFDFY 94
Query: 276 RAMLCDG--IAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYA 333
R +L G + P++ + L+ AC GLQ+H + ++ GFD +Q +I YA
Sbjct: 95 RRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYA 154
Query: 334 ACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISG 393
G ++ F A++ R G + AR+LF M +RD +W+AMISG
Sbjct: 155 ELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISG 214
Query: 394 YAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLN 453
YAQ + AL +FH M GVK N + M+SV A G L +GRWAH Y+ N I +
Sbjct: 215 YAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKIT 274
Query: 454 DNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDL 513
L+ ++D+YAKCG + A EVF+ + ++ +V W++ + GLAM+G L+++S +
Sbjct: 275 VRLATTLVDLYAKCGDMEKAMEVFWGMEEK--NVYTWSSALNGLAMNGFGEKCLELFSLM 332
Query: 514 EKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQ 573
++ + N++TF+ VL C G VD G+R+F SM++ + +EP L+HYGC+VDL RAG+
Sbjct: 333 KQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGR 392
Query: 574 LEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNI 633
LEDA +I+ MPMK +W +LL ASR++ N+E+G A+K + L+ ++ + VLLSNI
Sbjct: 393 LEDAVSIIQQMPMKPHAAVWSSLLHASRMYKNLELGVLASKKMLELETANHGAYVLLSNI 452
Query: 634 YADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
YAD+ W++ +R+ M+ G+++ PG S
Sbjct: 453 YADSNDWDNVSHVRQSMKSKGVRKQPGCS 481
Score = 137 bits (346), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 99/407 (24%), Positives = 182/407 (44%), Gaps = 41/407 (10%)
Query: 105 LNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILG----VIPNEVTLAS 160
L+ A ++ D++ + SMI ++ ++ + +R RIL + P+ T+
Sbjct: 56 LDYANQILDRSEKPTLFALNSMIRAHCKSPVPEKSFDFYR--RILSSGNDLKPDNYTVNF 113
Query: 161 VISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERN 220
++ + L +HG+ I+ D + T L+++Y L +F+ + +
Sbjct: 114 LVQACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPD 173
Query: 221 IVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLC 280
V M+ A+ G V AR+LFE +P +D ++W MI GY QV EAL ++ M
Sbjct: 174 FVCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQL 233
Query: 281 DGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINL 340
+G+ N V ++ ++SAC + A +G HS I + + T++ YA CG
Sbjct: 234 EGVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGD--- 290
Query: 341 ARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQP 400
+E A ++F M++++VY+WS+ ++G A N
Sbjct: 291 ----------------------------MEKAMEVFWGMEEKNVYTWSSALNGLAMNGFG 322
Query: 401 NMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLS--A 458
LELF M GV PN +T VSV + G + EG+ H + N + L
Sbjct: 323 EKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQ-RHFDSMRNEFGIEPQLEHYG 381
Query: 459 AIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANL 505
++D+YA+ G + A + + + + + W++++ M+ + L
Sbjct: 382 CLVDLYARAGRLEDAVSIIQQMPMKPHA-AVWSSLLHASRMYKNLEL 427
Score = 125 bits (314), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 93/358 (25%), Positives = 165/358 (46%), Gaps = 37/358 (10%)
Query: 6 FHSVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLI 65
F+ S +L+ +Y + + ++ C+ G Q+H + + G +++ +Q LI
Sbjct: 93 FYRRILSSGNDLKPDNYTVNFL--VQACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLI 150
Query: 66 NLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTS 125
+LYA+ G + +F+S D V M++ R + AR++F+ P + +++ +
Sbjct: 151 SLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNA 210
Query: 126 MIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLM 185
MI G+AQ REAL VF M++ GV N V + SV+S+ LG + + R H + +
Sbjct: 211 MISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNK 270
Query: 186 IDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFE 245
I V ++T L+++Y C + +A +F M+E+N+ +W+ LNG A G E ELF
Sbjct: 271 IKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFS 330
Query: 246 RIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGE 305
M DG+ PN V V ++ C E
Sbjct: 331 -------------------------------LMKQDGVTPNAVTFVSVLRGCSVVGFVDE 359
Query: 306 GLQIHSIIVKAGFDCYDFIQ--ATIIHFYAACGRINLA-RLQFELGIKDHIASWNALI 360
G Q H ++ F ++ ++ YA GR+ A + ++ +K H A W++L+
Sbjct: 360 G-QRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLL 416
>sp|Q9SR01|PP212_ARATH Pentatricopeptide repeat-containing protein At3g04750,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E81 PE=2
SV=1
Length = 661
Score = 296 bits (757), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 164/477 (34%), Positives = 267/477 (55%), Gaps = 19/477 (3%)
Query: 206 LVEARSLFDEMKERN---IVS---------WNVMLNGFAKAGLVELARELFERIPSKDVV 253
L++A S E+K+ + IVS WN ++ + + G +A ++F R+P DV
Sbjct: 139 LMKASSFLSEVKQIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVS 198
Query: 254 SWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSII 313
S+ MI GY + EAL +Y M+ DGI P++ ++ L+ CG G +H I
Sbjct: 199 SFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWI 258
Query: 314 VKAG--FDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIED 371
+ G + + ++ Y C LA+ F+ K + SWN ++ GF+R G +E
Sbjct: 259 ERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEA 318
Query: 372 ARQLFNNMQKRDVYSWSAMISGYAQNE-QPNMALELFHGM-VDAGVKPNEITMVSVFCAI 429
A+ +F+ M KRD+ SW++++ GY++ ELF+ M + VKP+ +TMVS+
Sbjct: 319 AQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGA 378
Query: 430 ASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSP 489
A++G L GRW H V+ + + LS+A+IDMY KCG I AF VF ++ V+
Sbjct: 379 ANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEK--DVAL 436
Query: 490 WNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMK 549
W ++I GLA HG+ L+++ +++ + N++T + VL+ C H+GLV+ G F MK
Sbjct: 437 WTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMK 496
Query: 550 SVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVI-RSMPMKADVVIWGTLLAASRIHGNVEV 608
+ +P+ +HYG +VDLL RAG++E+A++++ + MPM+ +WG++L+A R ++E
Sbjct: 497 DKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSACRGGEDIET 556
Query: 609 GERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGVV 665
E A L L+P VLLSNIYA GRW + R+ M + G+K+ G+S VV
Sbjct: 557 AELALTELLKLEPEKEGGYVLLSNIYATVGRWGYSDKTREAMENRGVKKTAGYSSVV 613
Score = 155 bits (392), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 104/417 (24%), Positives = 192/417 (46%), Gaps = 38/417 (9%)
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
C +L N ++ Y+ A +VF + P S+ MI+G+A+ EAL+++
Sbjct: 161 CLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLY 220
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKL--MIDGFVIISTNLLNMYC 201
M G+ P+E T+ S++ HL I + +HG + + + +I+S LL+MY
Sbjct: 221 FKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYF 280
Query: 202 VCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDG 261
C A+ FD MK++++ SWN M+ GF + G +E A+ +F+++P +D+VSW +++ G
Sbjct: 281 KCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFG 340
Query: 262 YLQV---ERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGF 318
Y + +R L Y + + + P+ V +V LIS G +H ++++
Sbjct: 341 YSKKGCDQRTVREL-FYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQL 399
Query: 319 DCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNN 378
F+ + +I Y CG I A + F+ + +A W ++I G +G + A QLF
Sbjct: 400 KGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGR 459
Query: 379 MQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEG 438
MQ + GV PN +T+++V A + SG ++EG
Sbjct: 460 MQ-------------------------------EEGVTPNNVTLLAVLTACSHSGLVEEG 488
Query: 439 RWAHEYVLNN-SITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAII 494
++ + +++D+ + G + A ++ S S W +I+
Sbjct: 489 LHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSIL 545
Score = 138 bits (348), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 91/344 (26%), Positives = 170/344 (49%), Gaps = 39/344 (11%)
Query: 27 VSALRYCSAHIA-VSQGQQIHSLIFKSG--LESNTFIQNSLINLYAKCGLISQAKSMFDS 83
V +L C H++ + G+ +H I + G SN + N+L+++Y KC AK FD+
Sbjct: 235 VLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDA 294
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDC-WREALEV 142
D + N M+ G++R + A+ VFD+ P + VS+ S++ G+++ C R E+
Sbjct: 295 MKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVREL 354
Query: 143 FRDMRIL-GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYC 201
F +M I+ V P+ VT+ S+IS + + G + R +HGLVI+L + G +S+ L++MYC
Sbjct: 355 FYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYC 414
Query: 202 VCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDG 261
C + A +F E+++ W M+ G A G + A +LF R+
Sbjct: 415 KCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQE------------ 462
Query: 262 YLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIV-KAGFDC 320
+G+ PN+V ++ +++AC + EGL + + + K GFD
Sbjct: 463 -------------------EGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDP 503
Query: 321 YDFIQATIIHFYAACGRINLAR--LQFELGIKDHIASWNALIAG 362
+++ GR+ A+ +Q ++ ++ + W ++++
Sbjct: 504 ETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSA 547
Score = 60.8 bits (146), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 106/235 (45%), Gaps = 38/235 (16%)
Query: 24 LALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDS 83
+ +VS + + + +S G+ +H L+ + L+ + F+ ++LI++Y KCG+I +A +F +
Sbjct: 369 VTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKT 428
Query: 84 CSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVF 143
+ D +TSMI G A + ++AL++F
Sbjct: 429 ATEKD-------------------------------VALWTSMITGLAFHGNGQQALQLF 457
Query: 144 RDMRILGVIPNEVTLASVISSSVHLGGIWE-CRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
M+ GV PN VTL +V+++ H G + E + + + K D +L+++ C
Sbjct: 458 GRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCR 517
Query: 203 CSSLVEARSLFD-EMKERNIVS-WNVMLNGFAKAGLVELAR----ELFERIPSKD 251
+ EA+ + +M R S W +L+ +E A EL + P K+
Sbjct: 518 AGRVEEAKDIVQKKMPMRPSQSMWGSILSACRGGEDIETAELALTELLKLEPEKE 572
>sp|Q9SR82|PP219_ARATH Putative pentatricopeptide repeat-containing protein At3g08820
OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1
Length = 685
Score = 295 bits (755), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 169/554 (30%), Positives = 274/554 (49%), Gaps = 64/554 (11%)
Query: 111 VFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGG 170
+F T Y S+I GF N + E L++F +R G+ + T V+ +
Sbjct: 67 LFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASS 126
Query: 171 IWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNG 230
LH LV+K + V T+LL++Y
Sbjct: 127 RKLGIDLHSLVVKCGFNHDVAAMTSLLSIY------------------------------ 156
Query: 231 FAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMI 290
+ +G + A +LF+ IP + VV+W + GY R EA+ +++ M+ G+ P+ I
Sbjct: 157 -SGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFI 215
Query: 291 VDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIK 350
V ++SAC G I + + F++ T+++ YA CG++
Sbjct: 216 VQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKM------------ 263
Query: 351 DHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGM 410
E AR +F++M ++D+ +WS MI GYA N P +ELF M
Sbjct: 264 -------------------EKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQM 304
Query: 411 VDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSI 470
+ +KP++ ++V + AS G L G W + + N ++ A+IDMYAKCG++
Sbjct: 305 LQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAM 364
Query: 471 NTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLS 530
FEVF ++++ + NA I GLA +G L+ ++ EK I + TF+G+L
Sbjct: 365 ARGFEVFKEMKEKDIVIM--NAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLC 422
Query: 531 TCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADV 590
C HAGL+ G R+F ++ VY ++ ++HYGCMVDL GRAG L+DA +I MPM+ +
Sbjct: 423 GCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNA 482
Query: 591 VIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEM 650
++WG LL+ R+ + ++ E K L L+P + + V LSNIY+ GRW++A +R M
Sbjct: 483 IVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMM 542
Query: 651 RDCGMKRLPGFSGV 664
GMK++PG+S +
Sbjct: 543 NKKGMKKIPGYSWI 556
Score = 138 bits (347), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 115/516 (22%), Positives = 219/516 (42%), Gaps = 108/516 (20%)
Query: 3 LDHFHSVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQN 62
LD F S+ +K L + LV L+ C+ + G +HSL+ K G +
Sbjct: 96 LDLFLSI---RKHGLYLHGFTFPLV--LKACTRASSRKLGIDLHSLVVKCGFNHDVAAMT 150
Query: 63 SLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVS 122
SL+++Y+ G RLNDA ++FD+ P + V+
Sbjct: 151 SLLSIYSGSG-------------------------------RLNDAHKLFDEIPDRSVVT 179
Query: 123 YTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLG----GIWECRMLH 178
+T++ G+ + REA+++F+ M +GV P+ + V+S+ VH+G G W + +
Sbjct: 180 WTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYME 239
Query: 179 GLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVE 238
+ ++ + FV T L+N+Y C + +ARS+FD M E++IV+W+ M+ G+A +
Sbjct: 240 EM--EMQKNSFV--RTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPK 295
Query: 239 LARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACG 298
E + ++ ML + + P+ IV +S+C
Sbjct: 296 -------------------------------EGIELFLQMLQENLKPDQFSIVGFLSSCA 324
Query: 299 RAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNA 358
A G S+I + F F+ +I YA CG A
Sbjct: 325 SLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCG---------------------A 363
Query: 359 LIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPN 418
+ GF ++F M+++D+ +A ISG A+N ++ +F G+ P+
Sbjct: 364 MARGF----------EVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPD 413
Query: 419 EITMVSVFCAIASSGTLKEG-RWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVF 477
T + + C +G +++G R+ + ++ ++D++ + G ++ A+ +
Sbjct: 414 GSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLI 473
Query: 478 YHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDL 513
+ R ++ W A++ G + D L + +L
Sbjct: 474 CDMPMRPNAIV-WGALLSGCRLVKDTQLAETVLKEL 508
>sp|Q9M4P3|PP316_ARATH Pentatricopeptide repeat-containing protein At4g16835,
mitochondrial OS=Arabidopsis thaliana GN=DYW10 PE=2 SV=3
Length = 656
Score = 295 bits (755), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 168/509 (33%), Positives = 272/509 (53%), Gaps = 47/509 (9%)
Query: 158 LASVISSSVHLGGI-WECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEM 216
L +I+ V G I R+ HG+ K + ++ L+ + S ++EA LFDE+
Sbjct: 64 LNKIIARCVRSGDIDGALRVFHGMRAK----NTITWNSLLIGISKDPSRMMEAHQLFDEI 119
Query: 217 KERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYR 276
E + S+N+ML+ + + E A+ F+R+P KD SW TMI GY + + +A ++
Sbjct: 120 PEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFY 179
Query: 277 AMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACG 336
+M+ N+V +IS Y CG
Sbjct: 180 SMM----EKNEVSWNAMISG-----------------------------------YIECG 200
Query: 337 RINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQ-KRDVYSWSAMISGYA 395
+ A F++ + +W A+I G+++ +E A +F +M +++ +W+AMISGY
Sbjct: 201 DLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYV 260
Query: 396 QNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDN 455
+N +P L+LF M++ G++PN + S + L+ GR H+ V +++ +
Sbjct: 261 ENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVT 320
Query: 456 LSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEK 515
++I MY KCG + A+++F ++ + V WNA+I G A HG+A+ L ++ ++
Sbjct: 321 ALTSLISMYCKCGELGDAWKLFEVMKKK--DVVAWNAMISGYAQHGNADKALCLFREMID 378
Query: 516 RNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLE 575
I+ + ITF+ VL C HAGLV++G YF+SM Y VEP HY CMVDLLGRAG+LE
Sbjct: 379 NKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLE 438
Query: 576 DAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYA 635
+A ++IRSMP + ++GTLL A R+H NVE+ E AA+ L L + V L+NIYA
Sbjct: 439 EALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGYVQLANIYA 498
Query: 636 DAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
RWED +RK M++ + ++PG+S +
Sbjct: 499 SKNRWEDVARVRKRMKESNVVKVPGYSWI 527
Score = 155 bits (393), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 120/453 (26%), Positives = 192/453 (42%), Gaps = 80/453 (17%)
Query: 49 IFKSGLESNTFIQNSL-INLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLND 107
+F NT NSL I + + +A +FD D + NIM+S Y+RN
Sbjct: 83 VFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLFDEIPEPDTFSYNIMLSCYVRNVNFEK 142
Query: 108 AREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVH 167
A+ FD+ P K S+ +MI G+A+ +A E+F M + NEV+ ++IS
Sbjct: 143 AQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSM----MEKNEVSWNAMISG--- 195
Query: 168 LGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVM 227
Y C L +A F R +V+W M
Sbjct: 196 --------------------------------YIECGDLEKASHFFKVAPVRGVVAWTAM 223
Query: 228 LNGFAKAGLVELARELFERIP-SKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPN 286
+ G+ KA VELA +F+ + +K++V+W MI GY++ R + L ++RAML +GI PN
Sbjct: 224 ITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPN 283
Query: 287 DVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQAT-IIHFYAACGRINLARLQF 345
+ + C A G QIH I+ K+ C D T +I Y CG + A F
Sbjct: 284 SSGLSSALLGCSELSALQLGRQIHQIVSKSTL-CNDVTALTSLISMYCKCGELGDAWKLF 342
Query: 346 ELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALE 405
E+ K + +WNA+I+G YAQ+ + AL
Sbjct: 343 EVMKKKDVVAWNAMISG-------------------------------YAQHGNADKALC 371
Query: 406 LFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNN-SITLNDNLSAAIIDMY 464
LF M+D ++P+ IT V+V A +G + G E ++ + + + ++D+
Sbjct: 372 LFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLL 431
Query: 465 AKCGSINTAFEVFYHIRDRTTSVSPWNAIICGL 497
+ G + A ++ R+ P A+ L
Sbjct: 432 GRAGKLEEALKLI-----RSMPFRPHAAVFGTL 459
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 109/236 (46%), Gaps = 19/236 (8%)
Query: 350 KDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHG 409
+D I N +IA +R+G I+ A ++F+ M+ ++ +W++++ G +++ P+ +E H
Sbjct: 58 QDQIFPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKD--PSRMMEA-HQ 114
Query: 410 MVDAGVKPNEITM-VSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCG 468
+ D +P+ + + + C + + K + ++ + N +I YA+ G
Sbjct: 115 LFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWN-----TMITGYARRG 169
Query: 469 SINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGV 528
+ A E+FY + ++ VS WNA+I G GD + R + + + +
Sbjct: 170 EMEKARELFYSMMEK-NEVS-WNAMISGYIECGDLEKASHFFKVAPVRGV----VAWTAM 223
Query: 529 LSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSM 584
++ A V+L E FK M V +L + M+ + ED ++ R+M
Sbjct: 224 ITGYMKAKKVELAEAMFKDM----TVNKNLVTWNAMISGYVENSRPEDGLKLFRAM 275
Score = 57.4 bits (137), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 58/109 (53%), Gaps = 4/109 (3%)
Query: 25 ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSC 84
L SAL CS A+ G+QIH ++ KS L ++ SLI++Y KCG + A +F+
Sbjct: 286 GLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVM 345
Query: 85 STLDPVACNIMISGYIRNDRLNDA----REVFDKTPIKCCVSYTSMIMG 129
D VA N MISGY ++ + A RE+ D +++ ++++
Sbjct: 346 KKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLA 394
>sp|O22137|PP202_ARATH Pentatricopeptide repeat-containing protein At2g45350,
chloroplastic OS=Arabidopsis thaliana GN=CRR4 PE=3 SV=2
Length = 613
Score = 294 bits (753), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 178/519 (34%), Positives = 282/519 (54%), Gaps = 45/519 (8%)
Query: 150 GVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEA 209
GV ++ +L+ V+ + LG + +HG + K + + + L+ +Y C L +
Sbjct: 116 GVSVDKFSLSLVLKACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLS 175
Query: 210 RSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPS--KDVVSWGTMIDGYLQVER 267
R +FD M +R+ VS+N M++G+ K GL+ ARELF+ +P K+++SW +MI GY Q
Sbjct: 176 RQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQT-- 233
Query: 268 LSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQAT 327
S+ + + + D P DLIS +
Sbjct: 234 -SDGVDIASKLFAD--MPEK----DLIS-----------------------------WNS 257
Query: 328 IIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSW 387
+I Y GRI A+ F++ + + +W +I G+ + G + A+ LF+ M RDV ++
Sbjct: 258 MIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAY 317
Query: 388 SAMISGYAQNEQPNMALELFHGM-VDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVL 446
++M++GY QN+ ALE+F M ++ + P++ T+V V AIA G L + H Y++
Sbjct: 318 NSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIV 377
Query: 447 NNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLT 506
L L A+IDMY+KCGSI A VF I ++ S+ WNA+I GLA+HG
Sbjct: 378 EKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENK--SIDHWNAMIGGLAIHGLGESA 435
Query: 507 LKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVD 566
+ +E+ ++K + ITF+GVL+ C H+GLV G F+ M+ + +EP L+HYGCMVD
Sbjct: 436 FDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVD 495
Query: 567 LLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPS 626
+L R+G +E A+ +I MP++ + VIW T L A H E GE AK L LQ + PS
Sbjct: 496 ILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFETGELVAKHLI-LQAGYNPS 554
Query: 627 R-VLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFSGV 664
VLLSN+YA G W+D +R M++ ++++PG S +
Sbjct: 555 SYVLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWI 593
Score = 181 bits (458), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 137/458 (29%), Positives = 220/458 (48%), Gaps = 79/458 (17%)
Query: 22 YELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMF 81
+ L+LV L+ CS V G QIH + K+GL S+ F+QN LI LY KCG + ++ MF
Sbjct: 122 FSLSLV--LKACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMF 179
Query: 82 DSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTP--IKCCVSYTSMIMGFAQ-NDCWRE 138
D D V+ N MI GY++ + ARE+FD P +K +S+ SMI G+AQ +D
Sbjct: 180 DRMPKRDSVSYNSMIDGYVKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQTSDGVDI 239
Query: 139 ALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLN 198
A ++F DM P + ++ W MIDG+V
Sbjct: 240 ASKLFADM------PEKDLIS------------WNS----------MIDGYV-------- 263
Query: 199 MYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTM 258
+ +A+ LFD M R++V+W M++G+AK G V A+ LF+++P +DVV++ +M
Sbjct: 264 ---KHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSM 320
Query: 259 IDGYLQVERLSEALTMYRAMLCDG-IAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAG 317
+ GY+Q + EAL ++ M + + P+D +V ++ A + + + +H IV+
Sbjct: 321 MAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQ 380
Query: 318 FDCYDFIQATIIHFYAACGRINLARLQFELGIKDH-IASWNALIAGFIRNGMIEDARQLF 376
F + +I Y+ CG I A L FE GI++ I WNA+I G +G+ E A +
Sbjct: 381 FYLGGKLGVALIDMYSKCGSIQHAMLVFE-GIENKSIDHWNAMIGGLAIHGLGESAFDML 439
Query: 377 NNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLK 436
+++ +KP++IT V V A + SG +K
Sbjct: 440 LQIER-------------------------------LSLKPDDITFVGVLNACSHSGLVK 468
Query: 437 EGRWAHEYV-LNNSITLNDNLSAAIIDMYAKCGSINTA 473
EG E + + I ++D+ ++ GSI A
Sbjct: 469 EGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELA 506
Score = 105 bits (261), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 102/373 (27%), Positives = 180/373 (48%), Gaps = 31/373 (8%)
Query: 250 KDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQI 309
+D W +I + + +AL + ML +G++ + + ++ AC R G+QI
Sbjct: 84 EDPFLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFVKGGMQI 143
Query: 310 HSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMI 369
H + K G F+Q +I Y CG + L+R F+ K S+N++I G+++ G+I
Sbjct: 144 HGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLI 203
Query: 370 EDARQLFN--NMQKRDVYSWSAMISGYAQ-NEQPNMALELFHGMVDAGVKPNEITMVSVF 426
AR+LF+ M+ +++ SW++MISGYAQ ++ ++A +LF M E ++S
Sbjct: 204 VSARELFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFADM-------PEKDLISWN 256
Query: 427 CAIASSGTLKEGRWAHEYVLNNSITLNDNLS-AAIIDMYAKCGSINTAFEVFYHIRDRTT 485
I G +K GR L + + D ++ A +ID YAK G ++ A +F + R
Sbjct: 257 SMI--DGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHR-- 312
Query: 486 SVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKL-NSITFIGVLSTCCHAGLVDLGERY 544
V +N+++ G + L+I+SD+EK + L + T + VL G R
Sbjct: 313 DVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLG------RL 366
Query: 545 FKSMK-SVYNVEPDLKHYG----CMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAA 599
K++ +Y VE G ++D+ + G ++ A V + K+ + W ++
Sbjct: 367 SKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKS-IDHWNAMIGG 425
Query: 600 SRIHGNVEVGERA 612
IHG +GE A
Sbjct: 426 LAIHG---LGESA 435
Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 133/291 (45%), Gaps = 31/291 (10%)
Query: 308 QIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNG 367
QIH ++K G + I+ +A+ R LA + + H+ S++ G
Sbjct: 30 QIHGRLIKTGIIKNSNLTTRIVLAFASSRRPYLADFARCVFHEYHVCSFSF--------G 81
Query: 368 MIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFC 427
+ED + W+A+I ++ + P AL L M++ GV ++ ++ V
Sbjct: 82 EVEDP------------FLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLK 129
Query: 428 AIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSV 487
A + G +K G H ++ + + L +I +Y KCG + + ++F + R SV
Sbjct: 130 ACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKR-DSV 188
Query: 488 SPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCH-AGLVDLGERYFK 546
S +N++I G G +++ DL +K N I++ ++S + VD+ + F
Sbjct: 189 S-YNSMIDGYVKCGLIVSARELF-DLMPMEMK-NLISWNSMISGYAQTSDGVDIASKLFA 245
Query: 547 SMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLL 597
M E DL + M+D + G++EDA+ + MP + DVV W T++
Sbjct: 246 DMP-----EKDLISWNSMIDGYVKHGRIEDAKGLFDVMP-RRDVVTWATMI 290
>sp|Q9FG16|PP367_ARATH Pentatricopeptide repeat-containing protein At5g06540
OS=Arabidopsis thaliana GN=PCMP-H88 PE=2 SV=1
Length = 622
Score = 294 bits (753), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 163/428 (38%), Positives = 253/428 (59%), Gaps = 4/428 (0%)
Query: 236 LVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLIS 295
L+ A +F +I + ++ + +I + S+A Y ML I P+++ LI
Sbjct: 66 LLGYAYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIK 125
Query: 296 ACGRAMAFGEGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRINLA-RLQFELGIKDHIA 354
A G Q HS IV+ GF +++ +++H YA CG I A R+ ++G +D +
Sbjct: 126 ASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRD-VV 184
Query: 355 SWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAG 414
SW +++AG+ + GM+E+AR++F+ M R++++WS MI+GYA+N A++LF M G
Sbjct: 185 SWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREG 244
Query: 415 VKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAF 474
V NE MVSV + A G L+ G A+EYV+ + +T+N L A++DM+ +CG I A
Sbjct: 245 VVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAI 304
Query: 475 EVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCH 534
VF + + T S+S W++II GLA+HG A+ + +S + +TF VLS C H
Sbjct: 305 HVFEGLPE-TDSLS-WSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSH 362
Query: 535 AGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWG 594
GLV+ G +++MK + +EP L+HYGC+VD+LGRAG+L +AE I M +K + I G
Sbjct: 363 GGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILG 422
Query: 595 TLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCG 654
LL A +I+ N EV ER L ++P H VLLSNIYA AG+W+ S+R M++
Sbjct: 423 ALLGACKIYKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKL 482
Query: 655 MKRLPGFS 662
+K+ PG+S
Sbjct: 483 VKKPPGWS 490
Score = 136 bits (342), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 141/274 (51%), Gaps = 31/274 (11%)
Query: 42 GQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCSTLDPVACNIMISGYIR 101
G+Q HS I + G +++ +++NSL+++YA CG I+ A +F D V+ M++GY +
Sbjct: 136 GEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCK 195
Query: 102 NDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDMRILGVIPNEVTLASV 161
+ +ARE+FD+ P + +++ MI G+A+N+C+ +A+++F M+ GV+ NE + SV
Sbjct: 196 CGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSV 255
Query: 162 ISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSLFDEMKERNI 221
ISS HLG + + V+K + +I+ T L++M+ C + +A +F+ + E +
Sbjct: 256 ISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDS 315
Query: 222 VSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCD 281
+SW+ ++ G A G +A+ + M+
Sbjct: 316 LSWSSIIKGLAVHG-------------------------------HAHKAMHYFSQMISL 344
Query: 282 GIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVK 315
G P DV ++SAC +GL+I+ + K
Sbjct: 345 GFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKK 378
Score = 130 bits (328), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 103/448 (22%), Positives = 195/448 (43%), Gaps = 59/448 (13%)
Query: 27 VSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSCST 86
++ L+ CS+ S + IH + ++ L S+ F+ + L+ L S F+ +
Sbjct: 16 LALLQSCSS---FSDLKIIHGFLLRTHLISDVFVASRLLALCVD-------DSTFNKPTN 65
Query: 87 LDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFRDM 146
L L A +F + + +I F+ +A + M
Sbjct: 66 L-----------------LGYAYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQM 108
Query: 147 RILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSL 206
+ P+ +T +I +S + + H +++ V + +L++MY C +
Sbjct: 109 LKSRIWPDNITFPFLIKASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFI 168
Query: 207 VEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVE 266
A +F +M R++VSW M+ G+ K G+VE ARE+F+ +P +++ +W MI+GY +
Sbjct: 169 AAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNN 228
Query: 267 RLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQA 326
+A+ ++ M +G+ N+ ++V +IS+C A G + + +VK+
Sbjct: 229 CFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMT------- 281
Query: 327 TIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYS 386
+NL LG AL+ F R G IE A +F + + D S
Sbjct: 282 -----------VNLI-----LG--------TALVDMFWRCGDIEKAIHVFEGLPETDSLS 317
Query: 387 WSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYV- 445
WS++I G A + + A+ F M+ G P ++T +V A + G +++G +E +
Sbjct: 318 WSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMK 377
Query: 446 LNNSITLNDNLSAAIIDMYAKCGSINTA 473
++ I I+DM + G + A
Sbjct: 378 KDHGIEPRLEHYGCIVDMLGRAGKLAEA 405
>sp|Q9ZQ74|PP146_ARATH Pentatricopeptide repeat-containing protein At2g03380,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E47 PE=3
SV=1
Length = 689
Score = 294 bits (753), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 188/643 (29%), Positives = 299/643 (46%), Gaps = 101/643 (15%)
Query: 23 ELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFD 82
++ AL+ C+ + G++IH + K N + L+++YAKCG
Sbjct: 142 DIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDNVVL-TGLLDMYAKCG---------- 190
Query: 83 SCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEV 142
+ A +VF+ ++ V +TSMI G+ +ND E L +
Sbjct: 191 ---------------------EIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVL 229
Query: 143 FRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCV 202
F MR V+ NE T ++I + L + + + HG ++K I+ + T+LL+MY
Sbjct: 230 FNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVK 289
Query: 203 CSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGY 262
C + AR +F+E ++V W M+ G+ G V
Sbjct: 290 CGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSV------------------------- 324
Query: 263 LQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVKAGFDCYD 322
+EAL++++ M I PN V I ++S CG G +H + +K G +D
Sbjct: 325 ------NEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGI--WD 376
Query: 323 F-IQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQK 381
+ ++H YA C + A+ FE+ + I +WN++I+GF +NG I +
Sbjct: 377 TNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHE---------- 426
Query: 382 RDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWA 441
AL LFH M V PN +T+ S+F A AS G+L G
Sbjct: 427 ---------------------ALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSL 465
Query: 442 HEYVLNNSITLND--NLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAM 499
H Y + + ++ A++D YAKCG +A +F I ++ T W+A+I G
Sbjct: 466 HAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTIT--WSAMIGGYGK 523
Query: 500 HGDANLTLKIYSDLEKRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLK 559
GD +L+++ ++ K+ K N TF +LS C H G+V+ G++YF SM YN P K
Sbjct: 524 QGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTK 583
Query: 560 HYGCMVDLLGRAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGL 619
HY CMVD+L RAG+LE A ++I MP++ DV +G L +H ++GE K + L
Sbjct: 584 HYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDL 643
Query: 620 QPSHGPSRVLLSNIYADAGRWEDAFSIRKEMRDCGMKRLPGFS 662
P VL+SN+YA GRW A +R M+ G+ ++ G S
Sbjct: 644 HPDDASYYVLVSNLYASDGRWNQAKEVRNLMKQRGLSKIAGHS 686
Score = 124 bits (310), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 98/398 (24%), Positives = 171/398 (42%), Gaps = 51/398 (12%)
Query: 216 MKERNIVSWNVMLNGFAKAGLVELARELFERIPSKDVVSWGTMIDGYLQVERLSEALTMY 275
M + +I + V L GF G + AR +F++IP D W M+ Y + E + +Y
Sbjct: 73 MGDISIATKLVSLYGFF--GYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLY 130
Query: 276 RAMLCDGIAPNDVMIVDLISACGRAMAFGEGLQIHSIIVK-AGFDCYDFIQATIIHFYAA 334
++ G +D++ + AC G +IH +VK FD + + ++ YA
Sbjct: 131 DLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFD--NVVLTGLLDMYAK 188
Query: 335 CGRINLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGY 394
CG I A F ++ W ++IAG+++N + E+ LFN M++ +V
Sbjct: 189 CGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLG-------- 240
Query: 395 AQNEQPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLND 454
NE T ++ A L +G+W H ++ + I L+
Sbjct: 241 -----------------------NEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSS 277
Query: 455 NLSAAIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLE 514
L +++DMY KCG I+ A VF + W A+I G +G N L ++ ++
Sbjct: 278 CLVTSLLDMYVKCGDISNARRVFN--EHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMK 335
Query: 515 KRNIKLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEP-----DLKHYGCMVDLLG 569
IK N +T VLS C ++LG +SV+ + D +V +
Sbjct: 336 GVEIKPNCVTIASVLSGCGLIENLELG-------RSVHGLSIKVGIWDTNVANALVHMYA 388
Query: 570 RAGQLEDAEEVIRSMPMKADVVIWGTLLAASRIHGNVE 607
+ Q DA+ V M + D+V W ++++ +G++
Sbjct: 389 KCYQNRDAKYVFE-MESEKDIVAWNSIISGFSQNGSIH 425
Score = 73.6 bits (179), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/299 (20%), Positives = 135/299 (45%), Gaps = 15/299 (5%)
Query: 348 GIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELF 407
G+ I+ L++ + G +DAR +F+ + + D Y W M+ Y N++ ++L+
Sbjct: 71 GLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLY 130
Query: 408 HGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKC 467
++ G + ++I A L G+ H ++ + ++ + ++DMYAKC
Sbjct: 131 DLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVP-SFDNVVLTGLLDMYAKC 189
Query: 468 GSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSITFIG 527
G I +A +VF I R +V W ++I G + L +++ + + N+ N T+
Sbjct: 190 GEIKSAHKVFNDITLR--NVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGT 247
Query: 528 VLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMV----DLLGRAGQLEDAEEVIRS 583
++ C + G+ + + V+ ++ C+V D+ + G + +A V
Sbjct: 248 LIMACTKLSALHQGKWFHGCL-----VKSGIELSSCLVTSLLDMYVKCGDISNARRVFNE 302
Query: 584 MPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAGRWED 642
D+V+W ++ +G+V + + G++ P+ V ++++ + G E+
Sbjct: 303 HS-HVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIK--PNCVTIASVLSGCGLIEN 358
>sp|P93005|PP181_ARATH Pentatricopeptide repeat-containing protein At2g33680
OS=Arabidopsis thaliana GN=PCMP-E19 PE=3 SV=1
Length = 727
Score = 294 bits (752), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 208/684 (30%), Positives = 327/684 (47%), Gaps = 81/684 (11%)
Query: 25 ALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINLYAKCGLISQAKSMFDSC 84
L+ L + S + G+ +H I ++G + N L+N YAKCG +++A S+F++
Sbjct: 16 TLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAI 75
Query: 85 STLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMIMGFAQNDCWREALEVFR 144
D V+ N +I+GY +N ++ SYT M ++FR
Sbjct: 76 ICKDVVSWNSLITGYSQNGGISS--------------SYTVM--------------QLFR 107
Query: 145 DMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCS 204
+MR ++PN TLA + + L R H LV+K+ G + + T+L+ MYC
Sbjct: 108 EMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAG 167
Query: 205 SLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELF-----ERIPSKD-------- 251
+ + +F M ERN +W+ M++G+A G VE A ++F E+ D
Sbjct: 168 LVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAV 227
Query: 252 --------VVSWG------TMIDGYLQVERLSEAL-TMYRAMLCDGIAPNDVMI---VDL 293
V G T+ +G L LS AL TMY C+ + M D
Sbjct: 228 LSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSK--CESLNEACKMFDSSGDR 285
Query: 294 ISACGRAMAFG--------EGLQIHSIIVKAGFDCYDFIQATIIHFYAACGRI------- 338
S AM G E +++ S + AG ++ TI+ AC I
Sbjct: 286 NSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEY---TIVGVLNACSDICYLEEGK 342
Query: 339 NLARLQFELGIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNE 398
L +LG + H+ + AL+ + + G + DAR+ F+ +Q+RDV W+++ISGY QN
Sbjct: 343 QLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNS 402
Query: 399 QPNMALELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSA 458
AL L+ M AG+ PN+ TM SV A +S TL+ G+ H + + + L + +
Sbjct: 403 DNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGS 462
Query: 459 AIIDMYAKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNI 518
A+ MY+KCGS+ VF R V WNA+I GL+ +G + L+++ ++ +
Sbjct: 463 ALSTMYSKCGSLEDGNLVFR--RTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGM 520
Query: 519 KLNSITFIGVLSTCCHAGLVDLGERYFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAE 578
+ + +TF+ ++S C H G V+ G YF M ++P + HY CMVDLL RAGQL++A+
Sbjct: 521 EPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAK 580
Query: 579 EVIRSMPMKADVVIWGTLLAASRIHGNVEVGERAAKSLAGLQPSHGPSRVLLSNIYADAG 638
E I S + + +W LL+A + HG E+G A + L L + V LS IY G
Sbjct: 581 EFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSRESSTYVQLSGIYTALG 640
Query: 639 RWEDAFSIRKEMRDCGMKRLPGFS 662
R D + K MR G+ + G S
Sbjct: 641 RMRDVERVWKHMRANGVSKEVGCS 664
Score = 160 bits (405), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 121/500 (24%), Positives = 213/500 (42%), Gaps = 99/500 (19%)
Query: 8 SVFNSQKANLQNSDYELALVSALRYCSAHIAVSQGQQIHSLIFKSGLESNTFIQNSLINL 67
++F +K +SDY + L +A I V G+QIH + K+GL + N+L+ +
Sbjct: 208 NLFLREKEEGSDSDY--VFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTM 265
Query: 68 YAKCGLISQAKSMFDSCSTLDPVACNIMISGYIRNDRLNDAREVFDKTPIKCCVSYTSMI 127
Y+KC +++A MFDS + + + M++GY
Sbjct: 266 YSKCESLNEACKMFDSSGDRNSITWSAMVTGY---------------------------- 297
Query: 128 MGFAQNDCWREALEVFRDMRILGVIPNEVTLASVISSSVHLGGIWECRMLHGLVIKLMID 187
+QN EA+++F M G+ P+E T+ V+++ + + E + LH ++KL +
Sbjct: 298 ---SQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFE 354
Query: 188 GFVIISTNLLNMYCVCSSLVEARSLFDEMKERNIVSWNVMLNGFAKAGLVELARELFERI 247
+ +T L++MY L +AR FD ++ER++ W
Sbjct: 355 RHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWT---------------------- 392
Query: 248 PSKDVVSWGTMIDGYLQVERLSEALTMYRAMLCDGIAPNDVMIVDLISACGRAMAFGEGL 307
++I GY+Q EAL +YR M GI PND + ++ AC G
Sbjct: 393 ---------SLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGK 443
Query: 308 QIHSIIVKAGFDCYDFIQATIIHFYAACGRINLARLQFELGIKDHIASWNALIAGFIRNG 367
Q+H +K GF I + + Y+ CG + L F + SWNA+I+G NG
Sbjct: 444 QVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNG 503
Query: 368 MIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMALELFHGMVDAGVKPNEITMVSVFC 427
Q + ALELF M+ G++P+++T V++
Sbjct: 504 -------------------------------QGDEALELFEEMLAEGMEPDDVTFVNIIS 532
Query: 428 AIASSGTLKEGRWAHEYVLNNSITLNDNLS--AAIIDMYAKCGSINTAFEVFYHIRDRTT 485
A + G ++ G W + ++++ I L+ + A ++D+ ++ G + A E F +
Sbjct: 533 ACSHKGFVERG-WFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKE-FIESANIDH 590
Query: 486 SVSPWNAIICGLAMHGDANL 505
+ W ++ HG L
Sbjct: 591 GLCLWRILLSACKNHGKCEL 610
Score = 142 bits (359), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 115/496 (23%), Positives = 226/496 (45%), Gaps = 58/496 (11%)
Query: 153 PNEVTLASVISSSVHLGGIWECRMLHGLVIKLMIDGFVIISTNLLNMYCVCSSLVEARSL 212
P+ TL ++ + R +HG +I+ + + L+N Y C L +A S+
Sbjct: 12 PHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSI 71
Query: 213 FDEMKERNIVSWNVMLNGFAKAGLVE---LARELFERIPSKDVVSWGTMIDGYLQVERLS 269
F+ + +++VSWN ++ G+++ G + +LF + ++D++ + G + E
Sbjct: 72 FNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSL 131
Query: 270 EALTMYR---AMLCDGIAPNDVMI-VDLISACGRAMAFGEGLQIHSIIVKAGFDCYDFIQ 325
++ T+ R A++ + D+ + L+ +A +GL++ + + + +
Sbjct: 132 QSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERN----TYTW 187
Query: 326 ATIIHFYAACGRINLARLQFEL-------------------------------------- 347
+T++ YA GR+ A F L
Sbjct: 188 STMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCIT 247
Query: 348 ---GIKDHIASWNALIAGFIRNGMIEDARQLFNNMQKRDVYSWSAMISGYAQNEQPNMAL 404
G+ +A NAL+ + + + +A ++F++ R+ +WSAM++GY+QN + A+
Sbjct: 248 IKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAV 307
Query: 405 ELFHGMVDAGVKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMY 464
+LF M AG+KP+E T+V V A + L+EG+ H ++L + + A++DMY
Sbjct: 308 KLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMY 367
Query: 465 AKCGSINTAFEVFYHIRDRTTSVSPWNAIICGLAMHGDANLTLKIYSDLEKRNIKLNSIT 524
AK G + A + F +++R V+ W ++I G + D L +Y ++ I N T
Sbjct: 368 AKAGCLADARKGFDCLQER--DVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPT 425
Query: 525 FIGVLSTCCHAGLVDLGER-YFKSMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRS 583
VL C ++LG++ + ++K + +E + + + + G LED V R
Sbjct: 426 MASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIG--SALSTMYSKCGSLEDGNLVFRR 483
Query: 584 MPMKADVVIWGTLLAA 599
P K DVV W +++
Sbjct: 484 TPNK-DVVSWNAMISG 498
Score = 50.4 bits (119), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/199 (20%), Positives = 85/199 (42%), Gaps = 13/199 (6%)
Query: 415 VKPNEITMVSVFCAIASSGTLKEGRWAHEYVLNNSITLNDNLSAAIIDMYAKCGSINTAF 474
+ P+ T++ + L GR H ++ + + +++ YAKCG + A
Sbjct: 10 LNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAH 69
Query: 475 EVFYHIRDRTTSVSPWNAIICGLAMHG---DANLTLKIYSDLEKRNIKLNSITFIGVLST 531
+F I + V WN++I G + +G + ++++ ++ ++I N+ T G+
Sbjct: 70 SIFNAIICK--DVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKA 127
Query: 532 CCHAGLVDLGERYFK---SMKSVYNVEPDLKHYGCMVDLLGRAGQLEDAEEVIRSMPMKA 588
+G + M S ++ D +V + +AG +ED +V MP +
Sbjct: 128 ESSLQSSTVGRQAHALVVKMSSFGDIYVDTS----LVGMYCKAGLVEDGLKVFAYMPER- 182
Query: 589 DVVIWGTLLAASRIHGNVE 607
+ W T+++ G VE
Sbjct: 183 NTYTWSTMVSGYATRGRVE 201
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.137 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 230,553,026
Number of Sequences: 539616
Number of extensions: 9157281
Number of successful extensions: 38046
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 351
Number of HSP's successfully gapped in prelim test: 92
Number of HSP's that attempted gapping in prelim test: 26767
Number of HSP's gapped (non-prelim): 3159
length of query: 665
length of database: 191,569,459
effective HSP length: 124
effective length of query: 541
effective length of database: 124,657,075
effective search space: 67439477575
effective search space used: 67439477575
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 65 (29.6 bits)