Your job contains 1 sequence.
>043582
MEEESRNHNHRLHESVPSSSISTSHSQENAVRQQQQSSGVSYRVNMSISDSSTRNDIWSC
LFTITMIFGVYGSLELQLGPHCSRPIHTNPLFVQSIKAQVLDRQTSSSLMLYGFHNSPPL
DVEFTWTETHIAVVPDDGHKEWLYFLNKGSKLEISYNVKSPSSAPLSLVIARGGESLEDW
IDHPSCPKTTLSWNILYGSGKIQQKISKSSDYYIAVGNLNSQQVEMQLNFTMNVLVYNAS
KAYYRCSLGSGLCSLSLDPLGTTSAILTSPGPTKGTSSAKWYVKLSYGPRWITYFAGLGA
MTILMFLAFRYCNMCRTTSGDGTGFQATDRGSQSPPLLSHKDDGLSSWGSSYDSVSHDEQ
DLEDWLPVNSLEGTSLNEGEINSNPRHLQVICCDAPRDCFFLPCGHCAGCFTCGTRIAEE
GGTCPICRKKIKKVRKIFTV
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 043582
(440 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2179187 - symbol:APD2 "ABERRANT POLLEN DEVELOP... 710 4.3e-70 1
TAIR|locus:4515102961 - symbol:APD4 "ABERRANT POLLEN DEVE... 356 1.1e-48 2
TAIR|locus:2042922 - symbol:APD3 "ABERRANT POLLEN DEVELOP... 349 6.0e-48 2
TAIR|locus:4515103444 - symbol:AT4G24204 species:3702 "Ar... 132 2.8e-13 2
ZFIN|ZDB-GENE-040426-2274 - symbol:zgc:77828 "zgc:77828" ... 132 8.1e-06 1
UNIPROTKB|J3KSU7 - symbol:RFFL "E3 ubiquitin-protein liga... 107 2.5e-05 1
ZFIN|ZDB-GENE-071004-29 - symbol:zgc:171740 "zgc:171740" ... 116 0.00048 1
TAIR|locus:2086263 - symbol:XBAT35 "XB3 ortholog 5 in Ara... 117 0.00063 1
>TAIR|locus:2179187 [details] [associations]
symbol:APD2 "ABERRANT POLLEN DEVELOPMENT 2" species:3702
"Arabidopsis thaliana" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0007067 "mitosis" evidence=IMP] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0007067 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 HOGENOM:HOG000005728
EMBL:BT015052 EMBL:BT015858 EMBL:AK229004 IPI:IPI00542458
RefSeq:NP_195765.3 UniGene:At.4685 ProteinModelPortal:Q6DBH0
SMR:Q6DBH0 PaxDb:Q6DBH0 PRIDE:Q6DBH0 EnsemblPlants:AT5G01450.1
GeneID:831860 KEGG:ath:AT5G01450 TAIR:At5g01450 eggNOG:NOG284846
InParanoid:Q6DBH0 OMA:TRIAETS PhylomeDB:Q6DBH0
ProtClustDB:CLSN2918608 Genevestigator:Q6DBH0 Uniprot:Q6DBH0
Length = 444
Score = 710 (255.0 bits), Expect = 4.3e-70, P = 4.3e-70
Identities = 149/390 (38%), Positives = 215/390 (55%)
Query: 47 SISDSSTRNDIWSCLFTI---------TMIFGVYGSLELQLGPHCSRPIHTNPLFVQSIK 97
++ ++ST D WSC+ + T+I G+YG+ + LGP+ S I +FVQ++
Sbjct: 60 NVRNNSTSEDPWSCVVVVATFCIFVSMTLILGLYGTTNVWLGPNSSFLIKPTSVFVQNVI 119
Query: 98 AQVLDRQTSSSLMLYGFHNSPPLDVEFTWTETHIAVVPDDGHKEWLYFLNKGSKLEISYN 157
+ L + S L+LYG + +P LDV W+E H VP+D +K W+ +LNKGS++++SYN
Sbjct: 120 VEELGNK-GSGLILYGLNQAPQLDVLTKWSEVHYLAVPNDSYKYWIQYLNKGSRVKVSYN 178
Query: 158 VKSPSSAPLSLVIARGGESLEDWIDHPSCPKTTLSWNILYXXXXXXXXXXXXXDYYIAVG 217
V+S S+ L LVIA+G + L +W+ P+ P TTLSW+I+ YY+AVG
Sbjct: 179 VESVGSS-LYLVIAQGVDGLSEWVQDPTRPDTTLSWHIISDSGYIEQDITKSSSYYVAVG 237
Query: 218 NLNSQQVEMQLNFTMNVLVYNASKAYYRXXXXXXXXXXXXDPLGTTSAILTSPGPTKGTS 277
N+ +V+ ++ + ++Y+ + AYY GT +A+LTSPGP S
Sbjct: 238 NVYLNEVKATIDIQVEGVLYDTTNAYYNCSFPNDKCTLSVPLFGTNAAVLTSPGPKLNNS 297
Query: 278 SAKWYVKLSYGPRWITYFAGLGAMTILMFLAFRYCNMCRTTSGDGTGFQATDRGSQSPPL 337
++ KLSY PRWI Y +G +T L+ + N + + D T D PL
Sbjct: 298 KNEFCAKLSYEPRWIAYIVCMGVVTALLLIVSSLFNKRQPVTEDET----VDENDDVAPL 353
Query: 338 LSHKDDGLSSWGSSYDSVSHDEQDLEDWLPVNSLEGTSLNEGEINSNPRHLQVICCDAPR 397
+ KDD SSW SSY S+ ++LE G GE +S+ R+L IC DAPR
Sbjct: 354 IPGKDDDNSSWCSSYSSILTSTEELE---------GA---HGEGHSSTRYLCAICYDAPR 401
Query: 398 DCFFLPCGHCAGCFTCGTRIAEEGGTCPIC 427
DCFFL CGHC CF CGTRIAE G CP+C
Sbjct: 402 DCFFLSCGHCVACFQCGTRIAETSGFCPVC 431
>TAIR|locus:4515102961 [details] [associations]
symbol:APD4 "ABERRANT POLLEN DEVELOPMENT 4"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0007067 "mitosis" evidence=IMP] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 EMBL:CP002685 GO:GO:0007067
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
UniGene:At.53065 IPI:IPI00891934 RefSeq:NP_001118468.1
UniGene:At.73935 ProteinModelPortal:F4ISV9 SMR:F4ISV9
EnsemblPlants:AT2G38195.1 GeneID:6240532 KEGG:ath:AT2G38195
Uniprot:F4ISV9
Length = 399
Score = 356 (130.4 bits), Expect = 1.1e-48, Sum P(2) = 1.1e-48
Identities = 88/286 (30%), Positives = 141/286 (49%)
Query: 63 TITMIFGVYGSLELQLGPHCSRPIHTNPLFVQSIKAQVLDRQTSSSLMLYGFHN-SPPLD 121
++ +IFGVYGS + LGP+ S + + +FV+SI A+ LD + L LYGF+ S P
Sbjct: 53 SVCLIFGVYGSETVWLGPNSSILVKPSSIFVKSINAKELDF-SKPGLQLYGFNGQSTPSG 111
Query: 122 VEFTWTETHIAVVPDDGHKEWLYFLNKGSKLEISYNVKSPSSAPLSLVIARGGESL-EDW 180
WTE+ + V + +K W Y+LN+G+ + ISYN+ P + + LVI G
Sbjct: 112 YFVNWTESRVLSVSQNSYKGWPYYLNRGTHMNISYNIL-PKGSAVRLVITEGMPFFYRSS 170
Query: 181 IDHPSCPKTTLSWNILYXXXXXXXXXXXXXDYYIAVGNLNSQQVEMQLNFTMNVLVYNAS 240
+ + T SWN++ YY+ V NL + VE++L+ + V++Y+
Sbjct: 171 LKDIAFRDTAWSWNLIQGSGMIQLDISKSKGYYLTVANLKRKDVEVELDIDVKVVLYDTK 230
Query: 241 KAYYRXXXXXXXXXXXXDPLGTTS--AILTSPGPTKGTS-SAKWYVKLSYGPRWITYFAG 297
++ Y + A++TSP +G S +WY++LSY PR I Y +
Sbjct: 231 QSSYNCSFSNGECSFKMNERSPVENYAVVTSPALGQGVSIDDEWYIELSYQPRLIAYGSF 290
Query: 298 LGAMTILMFLAFRYCNMCRTTSGDGTGFQATDRGSQSPPLLSHKDD 343
G + M +A +CN + G+G F + D S LL+ K D
Sbjct: 291 TGVLLSFMLVAIHFCNKLKCCGGEG--FLSED-DSVRTCLLADKGD 333
Score = 169 (64.5 bits), Expect = 1.1e-48, Sum P(2) = 1.1e-48
Identities = 26/48 (54%), Positives = 33/48 (68%)
Query: 380 EINSNPRHLQVICCDAPRDCFFLPCGHCAGCFTCGTRIAEEGGTCPIC 427
++ ++ + L IC DAPRDC FLPCGHC C+ CGT+I G CPIC
Sbjct: 339 DVEASNKSLCAICFDAPRDCCFLPCGHCVSCYQCGTKIKRTKGRCPIC 386
>TAIR|locus:2042922 [details] [associations]
symbol:APD3 "ABERRANT POLLEN DEVELOPMENT 3" species:3702
"Arabidopsis thaliana" [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0007067 "mitosis"
evidence=IMP] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0007067 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC003028
eggNOG:NOG121302 IPI:IPI00528340 RefSeq:NP_181357.2
UniGene:At.53065 ProteinModelPortal:B3H754 SMR:B3H754
EnsemblPlants:AT2G38220.1 GeneID:818401 KEGG:ath:AT2G38220
TAIR:At2g38220 HOGENOM:HOG000005728 PhylomeDB:B3H754
ProtClustDB:CLSN2708479 Genevestigator:B3H754 Uniprot:B3H754
Length = 404
Score = 349 (127.9 bits), Expect = 6.0e-48, Sum P(2) = 6.0e-48
Identities = 89/292 (30%), Positives = 144/292 (49%)
Query: 63 TITMIFGVYGSLELQLGPHCSRPIHTNPLFVQSIKAQVLDRQTSSSLMLYGFHN-SPPLD 121
++ +IFGVYGS + LGP+ S + + +FV+SIK + LD + L LYGF+ S P
Sbjct: 53 SVCLIFGVYGSETVWLGPNSSILVKPSSIFVKSIKVKELDF-SKPGLQLYGFNGQSTPSG 111
Query: 122 VEFTWTETHIAVVPDDGHKEWLYFLNKGSKLEISYNVKSPSSAPLSLVIARGGESLEDWI 181
WTE+ + V + +K W Y+LN+G+ + ISYN+ P + + LVI G + +
Sbjct: 112 YFVNWTESRVLSVSQNSYKGWPYYLNRGTHMNISYNIL-PKGSAVRLVITEGSQVIGMPF 170
Query: 182 DHPSCPK------TTLSWNILYXXXXXXXXXXXXXDYYIAVGNLNSQQVEMQLNFTMNVL 235
+ S K T SWN++ YY+ V NL + +E++L+ + +
Sbjct: 171 FYRSSLKDIAFRDTAWSWNLIQGSGMIQLDISKSKGYYLTVANLKRKDIEVELDIDVKAV 230
Query: 236 VYNASKAYYRXXXXXXXXXXXXD---PLGTTSAILTSPGPTKGTS-SAKWYVKLSYGPRW 291
+Y+ + Y + P+ A++TSP +G S +WY++LSY PR
Sbjct: 231 LYDTKQTSYNCSFSNGECSFKMNERYPV-ENYAVVTSPALGQGVSIDDEWYIELSYQPRL 289
Query: 292 ITYFAGLGAMTILMFLAFRYCNMCRTTSGDGTGFQATDRGSQSPPLLSHKDD 343
I Y + G + M +A +CN + G+G F + D S LL+ K D
Sbjct: 290 IAYGSFTGVLLSFMLVAIHFCNKLKCCGGEG--FLSGD-DSVRTCLLADKGD 338
Score = 169 (64.5 bits), Expect = 6.0e-48, Sum P(2) = 6.0e-48
Identities = 26/48 (54%), Positives = 33/48 (68%)
Query: 380 EINSNPRHLQVICCDAPRDCFFLPCGHCAGCFTCGTRIAEEGGTCPIC 427
++ ++ + L IC DAPRDC FLPCGHC C+ CGT+I G CPIC
Sbjct: 344 DVEASNKSLCAICFDAPRDCCFLPCGHCVSCYQCGTKIKRTKGRCPIC 391
>TAIR|locus:4515103444 [details] [associations]
symbol:AT4G24204 species:3702 "Arabidopsis thaliana"
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005634
"nucleus" evidence=ISM] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 EMBL:CP002687 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AL161561
IPI:IPI00892015 RefSeq:NP_001119040.1 UniGene:At.69248
ProteinModelPortal:B3H489 SMR:B3H489 EnsemblPlants:AT4G24204.3
GeneID:6240443 KEGG:ath:AT4G24204 TAIR:At4g24204
HOGENOM:HOG000064553 OMA:VICFEER PhylomeDB:B3H489
ProtClustDB:CLSN2708529 Genevestigator:B3H489 Uniprot:B3H489
Length = 178
Score = 132 (51.5 bits), Expect = 2.8e-13, Sum P(2) = 2.8e-13
Identities = 34/81 (41%), Positives = 43/81 (53%)
Query: 358 DEQDLEDWLP--VN-SLEGTSLNEGEINS-------NPRHLQVICCDAPRDCFFLPCGHC 407
+E+ DW P +N SLE T + E S + L VIC + R+CFF+PCGH
Sbjct: 83 EEEVTTDWTPPLINESLEVTGKGDVETASFSSSDDVDYSTLCVICFEERRNCFFVPCGHS 142
Query: 408 AGCFTCGTRI-AEEGGTCPIC 427
A C C RI +EE CPIC
Sbjct: 143 ATCRGCAQRILSEESKVCPIC 163
Score = 70 (29.7 bits), Expect = 2.8e-13, Sum P(2) = 2.8e-13
Identities = 11/44 (25%), Positives = 22/44 (50%)
Query: 272 PTKGTSSAKWYVKLSYGPRWITYFAGLGAMTILMFLAFRYCNMC 315
P+ +WY+ LS+ R + Y LG + + +L ++ + C
Sbjct: 26 PSDNDEFVRWYLGLSFSARVVIYITVLGTIMTITYLVLKFLSEC 69
>ZFIN|ZDB-GENE-040426-2274 [details] [associations]
symbol:zgc:77828 "zgc:77828" species:7955 "Danio
rerio" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 ZFIN:ZDB-GENE-040426-2274
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 eggNOG:NOG121302
HOGENOM:HOG000068080 HOVERGEN:HBG055079 OrthoDB:EOG4DJJWK
EMBL:BC067339 IPI:IPI00494765 RefSeq:NP_998061.1 UniGene:Dr.86893
ProteinModelPortal:Q6NX02 SMR:Q6NX02 GeneID:405832 KEGG:dre:405832
InParanoid:Q6NX02 NextBio:20817794 Uniprot:Q6NX02
Length = 346
Score = 132 (51.5 bits), Expect = 8.1e-06, P = 8.1e-06
Identities = 28/71 (39%), Positives = 40/71 (56%)
Query: 357 HDEQDLEDWLPVNSLEGTSLNEGEINSNPRHLQVICCDAPRDCFFLPCGHCAGCFTCGTR 416
+D++DL++ + N+ EGT G + +L IC D+P DC L CGH C CG R
Sbjct: 270 NDQKDLQNMVS-NATEGTDTGSG--TAVEENLCKICMDSPIDCVLLECGHMVTCTKCGKR 326
Query: 417 IAEEGGTCPIC 427
++E CPIC
Sbjct: 327 MSE----CPIC 333
>UNIPROTKB|J3KSU7 [details] [associations]
symbol:RFFL "E3 ubiquitin-protein ligase rififylin"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AC004223 HGNC:HGNC:24821 Ensembl:ENST00000581039
Uniprot:J3KSU7
Length = 141
Score = 107 (42.7 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 23/52 (44%), Positives = 27/52 (51%)
Query: 377 NEGEINSN-PRHLQVICCDAPRDCFFLPCGHCAGCFTCGTRIAEEGGTCPIC 427
N G + S +L IC D+P DC L CGH C CG R+ E CPIC
Sbjct: 92 NGGAVPSGLEENLCKICMDSPIDCVLLECGHMVTCTKCGKRMNE----CPIC 139
>ZFIN|ZDB-GENE-071004-29 [details] [associations]
symbol:zgc:171740 "zgc:171740" species:7955 "Danio
rerio" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
ZFIN:ZDB-GENE-071004-29 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 GeneTree:ENSGT00390000012719 EMBL:CR383673
IPI:IPI00932183 Ensembl:ENSDART00000099755 Bgee:F1QRV4
Uniprot:F1QRV4
Length = 339
Score = 116 (45.9 bits), Expect = 0.00048, P = 0.00048
Identities = 27/78 (34%), Positives = 39/78 (50%)
Query: 353 DSVSH---DEQDLEDWLPVNSLEGTSLNEGEINSNPRHLQVICCDAPRDCFFLPCGHCAG 409
+ V+H D++DL + + + E + E + +L IC D+P DC L CGH
Sbjct: 255 EKVTHLFNDQKDLHNLVSNTNTEAA--DPAEPSGQEENLCKICMDSPIDCVLLECGHMVT 312
Query: 410 CFTCGTRIAEEGGTCPIC 427
C CG R+ E CPIC
Sbjct: 313 CSKCGKRMNE----CPIC 326
>TAIR|locus:2086263 [details] [associations]
symbol:XBAT35 "XB3 ortholog 5 in Arabidopsis thaliana"
species:3702 "Arabidopsis thaliana" [GO:0005737 "cytoplasm"
evidence=ISM;IDA] [GO:0008270 "zinc ion binding" evidence=IEA;ISS]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] InterPro:IPR001841
InterPro:IPR002110 PROSITE:PS50088 PROSITE:PS50089 SMART:SM00184
SMART:SM00248 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005634
GO:GO:0005737 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872
GO:GO:0008270 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 EMBL:AB025608 HOGENOM:HOG000242293
EMBL:DQ086844 EMBL:AY045637 EMBL:AY059650 EMBL:AY088137
IPI:IPI00541522 IPI:IPI00545814 RefSeq:NP_566724.1
RefSeq:NP_850628.1 UniGene:At.26166 ProteinModelPortal:Q4FE47
SMR:Q4FE47 IntAct:Q4FE47 STRING:Q4FE47 PaxDb:Q4FE47 PRIDE:Q4FE47
EnsemblPlants:AT3G23280.1 GeneID:821907 KEGG:ath:AT3G23280
TAIR:At3g23280 eggNOG:NOG317888 InParanoid:Q4FE47 OMA:DIESKKW
ProtClustDB:CLSN2688690 Genevestigator:Q4FE47 Uniprot:Q4FE47
Length = 462
Score = 117 (46.2 bits), Expect = 0.00063, P = 0.00063
Identities = 35/110 (31%), Positives = 47/110 (42%)
Query: 322 GTGFQATDRGSQSPPL----LSHKDDGLSSWGSSYDSVSHDEQDLEDWLPVNSLEGTSLN 377
G G + +PPL ++ DDG + S DS D LP S EG
Sbjct: 349 GIGI-VLESSPSAPPLTDDDIATVDDGPIHY-PSIDSTPVDLPSAAS-LPA-STEGERKE 404
Query: 378 EGEINSNPRHLQVICCDAPRDCFFLPCGHCAGCFTCGTRIAEEGGTCPIC 427
+G + IC DAP + +PCGH AGC +C I + CP+C
Sbjct: 405 DGNTGTC-----AICLDAPSEAVCVPCGHVAGCMSCLKEIKSKNWGCPVC 449
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.133 0.425 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 440 393 0.00095 117 3 11 22 0.40 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 8
No. of states in DFA: 632 (67 KB)
Total size of DFA: 299 KB (2153 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 30.44u 0.10s 30.54t Elapsed: 00:00:01
Total cpu time: 30.45u 0.10s 30.55t Elapsed: 00:00:01
Start: Fri May 10 08:53:00 2013 End: Fri May 10 08:53:01 2013