BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043582
(440 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q4FE47|XB35_ARATH Putative E3 ubiquitin-protein ligase XBAT35 OS=Arabidopsis thaliana
GN=XBAT35 PE=2 SV=1
Length = 462
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 31/51 (60%)
Query: 390 VICCDAPRDCFFLPCGHCAGCFTCGTRIAEEGGTCPICRKKIKKVRKIFTV 440
IC DAP + +PCGH AGC +C I + CP+CR KI +V K++ V
Sbjct: 412 AICLDAPSEAVCVPCGHVAGCMSCLKEIKSKNWGCPVCRAKIDQVIKLYRV 462
>sp|Q9FPH0|XB34_ARATH Putative E3 ubiquitin-protein ligase XBAT34 OS=Arabidopsis thaliana
GN=XBAT34 PE=2 SV=1
Length = 376
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 32/53 (60%)
Query: 388 LQVICCDAPRDCFFLPCGHCAGCFTCGTRIAEEGGTCPICRKKIKKVRKIFTV 440
L VIC DAP + +PCGH AGC +C I + CP+CR I +V K++ V
Sbjct: 324 LCVICVDAPSEAVCVPCGHVAGCISCLKEIENKKMGCPVCRANIDQVIKLYHV 376
>sp|Q7XI08|XB34_ORYSJ Probable E3 ubiquitin-protein ligase XBOS34 OS=Oryza sativa subsp.
japonica GN=XBOS34 PE=2 SV=1
Length = 513
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 32/51 (62%)
Query: 390 VICCDAPRDCFFLPCGHCAGCFTCGTRIAEEGGTCPICRKKIKKVRKIFTV 440
VIC DAP + +PCGH AGC +C I + CPICR KI ++ +++ V
Sbjct: 463 VICLDAPVEGACIPCGHMAGCMSCLKDIESKKWGCPICRAKINQIIRLYAV 513
>sp|Q5M7X9|MUL1A_DANRE Mitochondrial ubiquitin ligase activator of nfkb 1-A OS=Danio rerio
GN=mul1a PE=2 SV=1
Length = 341
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Query: 369 NSLEGTSLNEGEINSNPRHLQVICCDAPRDCFFLPCGHCAGCFTCGTRIAEEGGTCPICR 428
EG E E ++ + VIC PR C L CGH CF C + + CPICR
Sbjct: 272 REFEGMGTGEREEDNGVENACVICLSNPRGCVLLDCGHVCCCFRCYQALPQP--FCPICR 329
Query: 429 KKIKKVRKIF 438
+ IK+V ++
Sbjct: 330 QHIKRVVPLY 339
>sp|Q8WZ73|RFFL_HUMAN E3 ubiquitin-protein ligase rififylin OS=Homo sapiens GN=RFFL PE=1
SV=1
Length = 363
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Query: 391 ICCDAPRDCFFLPCGHCAGCFTCGTRIAEEGGTCPICRKKIKKVRKIF 438
IC D+P DC L CGH C CG R+ E CPICR+ + + +F
Sbjct: 318 ICMDSPIDCVLLECGHMVTCTKCGKRMNE----CPICRQYVIRAVHVF 361
>sp|Q6ZQM0|RFFL_MOUSE E3 ubiquitin-protein ligase rififylin OS=Mus musculus GN=Rffl PE=1
SV=1
Length = 377
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Query: 391 ICCDAPRDCFFLPCGHCAGCFTCGTRIAEEGGTCPICRKKIKKVRKIF 438
IC D+P DC L CGH C CG R+ E CPICR+ + + +F
Sbjct: 332 ICMDSPIDCVLLECGHMVTCTKCGKRMNE----CPICRQYVIRAVHVF 375
>sp|Q8CIN9|RFFL_RAT E3 ubiquitin-protein ligase rififylin OS=Rattus norvegicus GN=Rffl
PE=1 SV=1
Length = 362
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Query: 391 ICCDAPRDCFFLPCGHCAGCFTCGTRIAEEGGTCPICRKKIKKVRKIF 438
IC D+P DC L CGH C CG R+ E CPICR+ + + +F
Sbjct: 317 ICMDSPIDCVLLECGHMVTCTKCGKRMNE----CPICRQYVIRAVHVF 360
>sp|O15151|MDM4_HUMAN Protein Mdm4 OS=Homo sapiens GN=MDM4 PE=1 SV=2
Length = 490
Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Query: 391 ICCDAPRDCFFL--PCGHCAGCFTCGTRIAEEGGTCPICRKKIKKVRKIF 438
+C PRD + GH CF C R+ + G +CPIC+K+I+ V K+F
Sbjct: 439 LCEKRPRDGNIIHGRTGHLVTCFHCARRLKKAGASCPICKKEIQLVIKVF 488
>sp|Q5E9J6|RNF34_BOVIN E3 ubiquitin-protein ligase RNF34 OS=Bos taurus GN=RNF34 PE=2 SV=1
Length = 375
Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Query: 391 ICCDAPRDCFFLPCGHCAGCFTCGTRIAEEGGTCPICRKKIKKVRKIF 438
IC DA DC L CGH C CG R++E CPICR+ + + +F
Sbjct: 330 ICMDAVIDCVLLECGHMVTCTKCGKRMSE----CPICRQYVVRAVHVF 373
>sp|Q5NVC7|RNF34_PONAB E3 ubiquitin-protein ligase RNF34 OS=Pongo abelii GN=RNF34 PE=2
SV=2
Length = 372
Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Query: 391 ICCDAPRDCFFLPCGHCAGCFTCGTRIAEEGGTCPICRKKIKKVRKIF 438
IC DA DC L CGH C CG R++E CPICR+ + + +F
Sbjct: 327 ICMDAVIDCVLLECGHMVTCTKCGKRMSE----CPICRQYVVRAVHVF 370
>sp|Q969K3|RNF34_HUMAN E3 ubiquitin-protein ligase RNF34 OS=Homo sapiens GN=RNF34 PE=1
SV=1
Length = 372
Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Query: 391 ICCDAPRDCFFLPCGHCAGCFTCGTRIAEEGGTCPICRKKIKKVRKIF 438
IC DA DC L CGH C CG R++E CPICR+ + + +F
Sbjct: 327 ICMDAVIDCVLLECGHMVTCTKCGKRMSE----CPICRQYVVRAVHVF 370
>sp|Q6AYH3|RNF34_RAT E3 ubiquitin-protein ligase RNF34 OS=Rattus norvegicus GN=Rnf34
PE=1 SV=1
Length = 381
Score = 46.2 bits (108), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Query: 391 ICCDAPRDCFFLPCGHCAGCFTCGTRIAEEGGTCPICRKKIKKVRKIF 438
IC DA DC L CGH C CG R++E CPICR+ + + +F
Sbjct: 336 ICMDAVIDCVLLECGHMVTCTKCGKRMSE----CPICRQYVVRAVHVF 379
>sp|Q99KR6|RNF34_MOUSE E3 ubiquitin-protein ligase RNF34 OS=Mus musculus GN=Rnf34 PE=1
SV=1
Length = 376
Score = 46.2 bits (108), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Query: 391 ICCDAPRDCFFLPCGHCAGCFTCGTRIAEEGGTCPICRKKIKKVRKIF 438
IC DA DC L CGH C CG R++E CPICR+ + + +F
Sbjct: 331 ICMDAVIDCVLLECGHMVTCTKCGKRMSE----CPICRQYVVRAVHVF 374
>sp|Q9VUX2|MIB_DROME E3 ubiquitin-protein ligase mind-bomb OS=Drosophila melanogaster
GN=mib1 PE=1 SV=3
Length = 1226
Score = 45.8 bits (107), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Query: 390 VICCDAPRDCFFLPCGHCAGCFTCGTRIAEEGGTCPICRKKIKKVRKI 437
++C DA RD F PCGH + C TC R+ + C ICR+ + KI
Sbjct: 971 LVCSDAKRDTVFKPCGHVSCCETCAPRVKK----CLICRETVSSREKI 1014
Score = 35.0 bits (79), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 28/48 (58%), Gaps = 6/48 (12%)
Query: 391 ICCDAPRDCFFLPCGHCAGCFTCGTRIAEEGGTCPICRKKIKKVRKIF 438
+C D ++ FL CGH C CG +I EG CPICRK ++K +F
Sbjct: 1185 VCFDRIKNMVFL-CGH-GTCQMCGDQI--EG--CPICRKTVEKRILLF 1226
Score = 33.9 bits (76), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 4/45 (8%)
Query: 390 VICCDAPRDCFFLPCGHCAGCFTCGTRIAEEGGTCPICRKKIKKV 434
++C D FF PCGH C C + + C +CR +I ++
Sbjct: 1018 LVCSDRRAAVFFRPCGHMVACEHCSALMKK----CVLCRTQIDEI 1058
>sp|Q2HJ21|MDM4_BOVIN Protein Mdm4 OS=Bos taurus GN=MDM4 PE=2 SV=1
Length = 491
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 23/36 (63%)
Query: 405 GHCAGCFTCGTRIAEEGGTCPICRKKIKKVRKIFTV 440
GH CF C R+ + G +CPIC+K+I+ V K+F
Sbjct: 456 GHLVTCFHCARRLKKAGASCPICKKEIQLVIKVFVA 491
>sp|Q9LFH6|LUL2_ARATH Probable E3 ubiquitin-protein ligase LUL2 OS=Arabidopsis thaliana
GN=LUL2 PE=2 SV=1
Length = 299
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 373 GTSLNEGEINSNPRHLQ-VICCDAPRDCFFLPCGHCAGCFTCGTRIAEEGGTCPICRKKI 431
G ++++ ++N R + VIC PRD LPC H C C + + CPICR+ +
Sbjct: 226 GNTVDDNGEDANERGKECVICLSEPRDTTVLPCRHMCMCSGCAKLLRFQTNLCPICRQPV 285
Query: 432 KKVRKI 437
++ +I
Sbjct: 286 DRLLEI 291
>sp|Q84ME1|LUL3_ARATH Probable E3 ubiquitin-protein ligase LUL3 OS=Arabidopsis thaliana
GN=LUL3 PE=1 SV=1
Length = 378
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 25/48 (52%)
Query: 390 VICCDAPRDCFFLPCGHCAGCFTCGTRIAEEGGTCPICRKKIKKVRKI 437
VIC P+D +PC H C C + + CPICR+ I ++ KI
Sbjct: 322 VICLTEPKDTAVMPCRHLCLCSDCAEELRFQTNKCPICRQPIHELVKI 369
>sp|Q804S5|MIB1_DANRE E3 ubiquitin-protein ligase mib1 OS=Danio rerio GN=mib1 PE=1 SV=1
Length = 1030
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 6/59 (10%)
Query: 381 INSNPRHLQ--VICCDAPRDCFFLPCGHCAGCFTCGTRIAEEGGTCPICRKKIKKVRKI 437
+NSN L+ ++C D RD F PCGH A C C R+ + C IC+++++ KI
Sbjct: 807 LNSNNETLEECMVCSDMKRDTLFGPCGHIATCSLCSPRVKK----CLICKEQVQSRTKI 861
Score = 36.6 bits (83), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 6/43 (13%)
Query: 391 ICCDAPRDCFFLPCGHCAGCFTCGTRIAEEGGTCPICRKKIKK 433
+C D ++ F+ CGH C CG R++E CPICRK I++
Sbjct: 989 VCLDRLKNMIFM-CGH-GTCQLCGDRMSE----CPICRKAIER 1025
>sp|Q557E7|CBLA_DICDI E3 ubiquitin-protein ligase cblA OS=Dictyostelium discoideum
GN=cblA-1 PE=1 SV=1
Length = 665
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Query: 386 RHLQVICCDAPRDCFFLPCGHCAGCFTCGTRIAEEGGTCPICRKKIKKVRKIF 438
+ L +C D + FL CGH + C C ++ + CPICR +I +V IF
Sbjct: 615 KDLCTVCMDNEINTVFLECGHLSCCSLCSVKLKK----CPICRSRITRVINIF 663
>sp|Q9S752|LOFG2_ARATH Probable E3 ubiquitin-protein ligase LOG2 OS=Arabidopsis thaliana
GN=LOG2 PE=1 SV=1
Length = 388
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%)
Query: 390 VICCDAPRDCFFLPCGHCAGCFTCGTRIAEEGGTCPICRKKIKKVRKI 437
VIC PRD LPC H C C + + CPICR+ ++++ +I
Sbjct: 320 VICLSEPRDTTVLPCRHMCMCSGCAKVLRFQTNRCPICRQPVERLLEI 367
>sp|Q6TEM9|MYLIA_DANRE E3 ubiquitin-protein ligase MYLIP-A OS=Danio rerio GN=mylipa PE=1
SV=2
Length = 472
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 4/51 (7%)
Query: 388 LQVICCDAPRDCFFLPCGHCAGCFTCGTRIAEEGGTCPICRKKIKKVRKIF 438
L ++CC+ D F PCGH C C ++ +CP+CR +++ V+ ++
Sbjct: 383 LCMLCCEEEIDAAFCPCGHMVCCQNCAAQLQ----SCPVCRSEVEHVQHVY 429
>sp|A8MQ27|NEU1B_HUMAN E3 ubiquitin-protein ligase NEURL1B OS=Homo sapiens GN=NEURL1B PE=1
SV=1
Length = 555
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 391 ICCDAPRDCFFLPCGHCAGCFTCGTRIAEEG-GTCPICRKKIKKVRKIF 438
+C D D CGH C +CG R+ + CPICR+ IK V KI+
Sbjct: 505 VCFDGEVDTVIYTCGHMCLCHSCGLRLKRQARACCPICRRPIKDVIKIY 553
>sp|D3ZDI6|MYLIP_RAT E3 ubiquitin-protein ligase MYLIP OS=Rattus norvegicus GN=Mylip
PE=2 SV=1
Length = 445
Score = 43.1 bits (100), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 30/51 (58%), Gaps = 4/51 (7%)
Query: 388 LQVICCDAPRDCFFLPCGHCAGCFTCGTRIAEEGGTCPICRKKIKKVRKIF 438
L ++CC+ + F PCGH C +C ++ +CP+CR +++ V+ ++
Sbjct: 386 LCMVCCEEEINSTFCPCGHTVCCESCAAQLQ----SCPVCRSRVEHVQHVY 432
>sp|Q4R7G8|MUL1_MACFA Mitochondrial ubiquitin ligase activator of NFKB 1 OS=Macaca
fascicularis GN=MUL1 PE=2 SV=1
Length = 352
Score = 43.1 bits (100), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 390 VICCDAPRDCFFLPCGHCAGCFTCGTRIAEEGGTCPICRKKIKKVRKIF 438
V+C + + C FL CGH C C R E CPICR+ I +V ++
Sbjct: 303 VVCLSSFKSCVFLECGHVCSCTEC-YRALPEPKKCPICRQAITRVIPLY 350
>sp|Q05AK5|MYLIB_DANRE E3 ubiquitin-protein ligase MYLIP-B OS=Danio rerio GN=mylipb PE=2
SV=1
Length = 464
Score = 42.7 bits (99), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 40/90 (44%), Gaps = 4/90 (4%)
Query: 349 GSSYDSVSHDEQDLEDWLPVNSLEGTSLNEGEINSNPRHLQVICCDAPRDCFFLPCGHCA 408
G S + + D E+ + V+ E L E +CC+ F PCGH
Sbjct: 341 GISRSLLRQTKVDREERMCVDCRETHVLKEKLQRLQEALTCALCCEQEISAAFCPCGHMF 400
Query: 409 GCFTCGTRIAEEGGTCPICRKKIKKVRKIF 438
C+ C +++ CP+CR ++ +V+ ++
Sbjct: 401 CCYNCASQLQ----CCPVCRSEVDRVQHVY 426
>sp|Q969V5|MUL1_HUMAN Mitochondrial ubiquitin ligase activator of NFKB 1 OS=Homo sapiens
GN=MUL1 PE=1 SV=1
Length = 352
Score = 42.7 bits (99), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 390 VICCDAPRDCFFLPCGHCAGCFTCGTRIAEEGGTCPICRKKIKKVRKIF 438
V+C + + C FL CGH C C R E CPICR+ I +V ++
Sbjct: 303 VVCLSSFKSCVFLECGHVCSCTEC-YRALPEPKKCPICRQAITRVIPLY 350
>sp|Q96PX1|RN157_HUMAN RING finger protein 157 OS=Homo sapiens GN=RNF157 PE=1 SV=3
Length = 679
Score = 42.7 bits (99), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 372 EGTSLNEGEINSNPRHLQVICCDAPRDCFFLPCGHCAGCFTCGTRIAEEGGTCPICRKKI 431
+ + + E E++ N V+C RD LPC H C TC + + CPICR
Sbjct: 261 QDSKVAEDEVSDNSAEC-VVCLSDVRDTLILPCRHLCLCNTCADTLRYQANNCPICRLPF 319
Query: 432 KKVRKI 437
+ + +I
Sbjct: 320 RALLQI 325
>sp|Q8WY64|MYLIP_HUMAN E3 ubiquitin-protein ligase MYLIP OS=Homo sapiens GN=MYLIP PE=1
SV=2
Length = 445
Score = 42.7 bits (99), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 30/51 (58%), Gaps = 4/51 (7%)
Query: 388 LQVICCDAPRDCFFLPCGHCAGCFTCGTRIAEEGGTCPICRKKIKKVRKIF 438
L ++CC+ + F PCGH C +C ++ +CP+CR +++ V+ ++
Sbjct: 386 LCMVCCEEEINSTFCPCGHTVCCESCAAQLQ----SCPVCRSRVEHVQHVY 432
>sp|Q0MW30|NEU1B_MOUSE E3 ubiquitin-protein ligase NEURL1B OS=Mus musculus GN=Neurl1b PE=1
SV=1
Length = 546
Score = 42.7 bits (99), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 391 ICCDAPRDCFFLPCGHCAGCFTCGTRIAEEG-GTCPICRKKIKKVRKIF 438
+C D+ D CGH C CG R+ + CPICR+ IK V KI+
Sbjct: 496 VCFDSEVDTVIYTCGHMCLCHGCGLRLRRQARACCPICRRPIKDVIKIY 544
>sp|Q8BVR6|RSPRY_MOUSE RING finger and SPRY domain-containing protein 1 OS=Mus musculus
GN=Rspry1 PE=2 SV=1
Length = 576
Score = 42.7 bits (99), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 5/48 (10%)
Query: 391 ICCDAPRDCFFLPCGHCAGCFTCGTRIAEEGGTCPICRKKI-KKVRKI 437
+CCD D PCGH C C ++ TCP+CRK+I ++R+I
Sbjct: 529 LCCDEVADTQLKPCGHSDLCMDCALQLE----TCPLCRKEIVSRIRQI 572
>sp|Q5R881|RSPRY_PONAB RING finger and SPRY domain-containing protein 1 OS=Pongo abelii
GN=RSPRY1 PE=2 SV=1
Length = 576
Score = 42.7 bits (99), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 5/48 (10%)
Query: 391 ICCDAPRDCFFLPCGHCAGCFTCGTRIAEEGGTCPICRKKI-KKVRKI 437
+CCD D PCGH C C ++ TCP+CRK+I ++R+I
Sbjct: 529 LCCDEVADTQLKPCGHSDLCMDCALQLE----TCPLCRKEIVSRIRQI 572
>sp|Q96DX4|RSPRY_HUMAN RING finger and SPRY domain-containing protein 1 OS=Homo sapiens
GN=RSPRY1 PE=2 SV=1
Length = 576
Score = 42.4 bits (98), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 5/48 (10%)
Query: 391 ICCDAPRDCFFLPCGHCAGCFTCGTRIAEEGGTCPICRKKI-KKVRKI 437
+CCD D PCGH C C ++ TCP+CRK+I ++R+I
Sbjct: 529 LCCDEVADTQLKPCGHSDLCMDCALQLE----TCPLCRKEIVSRIRQI 572
>sp|Q95LP3|RSPRY_MACFA RING finger and SPRY domain-containing protein 1 OS=Macaca
fascicularis GN=RSPRY1 PE=2 SV=1
Length = 576
Score = 42.4 bits (98), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 5/48 (10%)
Query: 391 ICCDAPRDCFFLPCGHCAGCFTCGTRIAEEGGTCPICRKKI-KKVRKI 437
+CCD D PCGH C C ++ TCP+CRK+I ++R+I
Sbjct: 529 LCCDEVADTQLKPCGHSDLCMDCALQLE----TCPLCRKEIVSRIRQI 572
>sp|Q62210|BIRC2_MOUSE Baculoviral IAP repeat-containing protein 2 OS=Mus musculus
GN=Birc2 PE=1 SV=1
Length = 612
Score = 42.4 bits (98), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 30/74 (40%), Gaps = 4/74 (5%)
Query: 365 WLPVNSLEGTSLNEGEINSNPRHLQVICCDAPRDCFFLPCGHCAGCFTCGTRIAEEGGTC 424
++P + G SL E +C D F+PCGH C C + + C
Sbjct: 541 YIPTEDVSGLSLEEQLRRLQEERTCKVCMDREVSIVFIPCGHLVVCQECAPSLRK----C 596
Query: 425 PICRKKIKKVRKIF 438
PICR IK + F
Sbjct: 597 PICRGTIKGTVRTF 610
>sp|Q24306|IAP1_DROME Apoptosis 1 inhibitor OS=Drosophila melanogaster GN=th PE=1 SV=2
Length = 438
Score = 42.4 bits (98), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Query: 391 ICCDAPRDCFFLPCGHCAGCFTCGTRIAEEGGTCPICRKKIKKVRKIF 438
IC A + FLPCGH C C + + + CP+CRK V +++
Sbjct: 393 ICYGAEYNTAFLPCGHVVACAKCASSVTK----CPLCRKPFTDVMRVY 436
>sp|Q9D074|MGRN1_MOUSE E3 ubiquitin-protein ligase MGRN1 OS=Mus musculus GN=Mgrn1 PE=1
SV=2
Length = 532
Score = 42.4 bits (98), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 24/51 (47%)
Query: 390 VICCDAPRDCFFLPCGHCAGCFTCGTRIAEEGGTCPICRKKIKKVRKIFTV 440
V+C RD LPC H C +C + + CPICR + + +I V
Sbjct: 279 VVCLSDLRDTLILPCRHLCLCTSCADTLRYQANNCPICRLPFRALLQIRAV 329
>sp|Q5XIQ4|MGRN1_RAT E3 ubiquitin-protein ligase MGRN1 OS=Rattus norvegicus GN=Mgrn1
PE=2 SV=1
Length = 533
Score = 42.4 bits (98), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 24/51 (47%)
Query: 390 VICCDAPRDCFFLPCGHCAGCFTCGTRIAEEGGTCPICRKKIKKVRKIFTV 440
V+C RD LPC H C +C + + CPICR + + +I V
Sbjct: 280 VVCLSDLRDTLILPCRHLCLCTSCADTLRYQANNCPICRLPFRALLQIRAV 330
>sp|O60291|MGRN1_HUMAN E3 ubiquitin-protein ligase MGRN1 OS=Homo sapiens GN=MGRN1 PE=1
SV=2
Length = 552
Score = 42.0 bits (97), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 24/51 (47%)
Query: 390 VICCDAPRDCFFLPCGHCAGCFTCGTRIAEEGGTCPICRKKIKKVRKIFTV 440
V+C RD LPC H C +C + + CPICR + + +I V
Sbjct: 279 VVCLSDLRDTLILPCRHLCLCTSCADTLRYQANNCPICRLPFRALLQIRAV 329
>sp|Q3TEL6|RN157_MOUSE RING finger protein 157 OS=Mus musculus GN=Rnf157 PE=2 SV=2
Length = 685
Score = 42.0 bits (97), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 23/48 (47%)
Query: 390 VICCDAPRDCFFLPCGHCAGCFTCGTRIAEEGGTCPICRKKIKKVRKI 437
V+C RD LPC H C TC + + CPICR + + +I
Sbjct: 278 VVCLSDVRDTLILPCRHLCLCNTCADTLRYQANNCPICRLPFRALLQI 325
>sp|Q8LA32|LUL4_ARATH Probable E3 ubiquitin-protein ligase LUL4 OS=Arabidopsis thaliana
GN=LUL4 PE=2 SV=1
Length = 359
Score = 42.0 bits (97), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 25/48 (52%)
Query: 390 VICCDAPRDCFFLPCGHCAGCFTCGTRIAEEGGTCPICRKKIKKVRKI 437
VIC +D LPC H C C + + CPICR+ I+++ +I
Sbjct: 303 VICMTEAKDTAVLPCRHLCMCSDCAKELRLQSNKCPICRQPIEELLEI 350
>sp|Q7ZUL9|MGRN1_DANRE Probable E3 ubiquitin-protein ligase MGRN1 OS=Danio rerio GN=mgrn1
PE=2 SV=1
Length = 529
Score = 42.0 bits (97), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 23/51 (45%)
Query: 390 VICCDAPRDCFFLPCGHCAGCFTCGTRIAEEGGTCPICRKKIKKVRKIFTV 440
V+C RD LPC H C C + + CPICR + + +I V
Sbjct: 277 VVCLSDLRDTLILPCRHLCLCNACADTLRYQANNCPICRLPFRALLQIRAV 327
>sp|O35618|MDM4_MOUSE Protein Mdm4 OS=Mus musculus GN=Mdm4 PE=1 SV=2
Length = 489
Score = 42.0 bits (97), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Query: 391 ICCDAPRDCFFL--PCGHCAGCFTCGTRIAEEGGTCPICRKKIKKVRKIF 438
+C PRD + H CF C R+ + G +CP C+K+I+ V K+F
Sbjct: 438 LCEKRPRDGNIIHGKTSHLTTCFHCARRLKKSGASCPACKKEIQLVIKVF 487
>sp|Q13490|BIRC2_HUMAN Baculoviral IAP repeat-containing protein 2 OS=Homo sapiens
GN=BIRC2 PE=1 SV=2
Length = 618
Score = 42.0 bits (97), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 30/74 (40%), Gaps = 4/74 (5%)
Query: 365 WLPVNSLEGTSLNEGEINSNPRHLQVICCDAPRDCFFLPCGHCAGCFTCGTRIAEEGGTC 424
++P + G SL E +C D F+PCGH C C + + C
Sbjct: 547 YIPTEDVSGLSLEEQLRRLQEERTCKVCMDKEVSVVFIPCGHLVVCQECAPSLRK----C 602
Query: 425 PICRKKIKKVRKIF 438
PICR IK + F
Sbjct: 603 PICRGIIKGTVRTF 616
>sp|Q8VCM5|MUL1_MOUSE Mitochondrial ubiquitin ligase activator of NFKB 1 OS=Mus musculus
GN=Mul1 PE=2 SV=2
Length = 352
Score = 42.0 bits (97), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 390 VICCDAPRDCFFLPCGHCAGCFTCGTRIAEEGGTCPICRKKIKKVRKIF 438
V+C + C FL CGH C C + E CPICR++I +V ++
Sbjct: 303 VVCLSNFKSCVFLECGHVCSCRQCYLALPEP-KRCPICRREITRVIPLY 350
>sp|Q86YT6|MIB1_HUMAN E3 ubiquitin-protein ligase MIB1 OS=Homo sapiens GN=MIB1 PE=1 SV=1
Length = 1006
Score = 42.0 bits (97), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Query: 390 VICCDAPRDCFFLPCGHCAGCFTCGTRIAEEGGTCPICRKKIKKVRKI 437
++C D RD F PCGH A C C R+ + C IC+++++ KI
Sbjct: 820 MVCSDMKRDTLFGPCGHIATCSLCSPRVKK----CLICKEQVQSRTKI 863
Score = 37.0 bits (84), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 26/43 (60%), Gaps = 6/43 (13%)
Query: 391 ICCDAPRDCFFLPCGHCAGCFTCGTRIAEEGGTCPICRKKIKK 433
+C D ++ FL CGH C CG R++E CPICRK I++
Sbjct: 965 VCLDRLKNMIFL-CGH-GTCQLCGDRMSE----CPICRKAIER 1001
>sp|Q80SY4|MIB1_MOUSE E3 ubiquitin-protein ligase MIB1 OS=Mus musculus GN=Mib1 PE=1 SV=1
Length = 1006
Score = 42.0 bits (97), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Query: 390 VICCDAPRDCFFLPCGHCAGCFTCGTRIAEEGGTCPICRKKIKKVRKI 437
++C D RD F PCGH A C C R+ + C IC+++++ KI
Sbjct: 820 MVCSDMKRDTLFGPCGHIATCSLCSPRVKK----CLICKEQVQSRTKI 863
Score = 37.0 bits (84), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 26/43 (60%), Gaps = 6/43 (13%)
Query: 391 ICCDAPRDCFFLPCGHCAGCFTCGTRIAEEGGTCPICRKKIKK 433
+C D ++ FL CGH C CG R++E CPICRK I++
Sbjct: 965 VCLDRLKNMIFL-CGH-GTCQLCGDRMSE----CPICRKAIER 1001
>sp|Q5XIN1|MDM4_RAT Protein Mdm4 OS=Rattus norvegicus GN=Mdm4 PE=2 SV=1
Length = 490
Score = 42.0 bits (97), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Query: 391 ICCDAPRDCFFL--PCGHCAGCFTCGTRIAEEGGTCPICRKKIKKVRKIF 438
+C PRD + H CF C R+ + G +CP C+K+I+ V K+F
Sbjct: 439 LCEKRPRDGNIIHGKTSHLTTCFHCARRLKKSGASCPACKKEIQLVIKVF 488
>sp|Q9LYW5|LUL1_ARATH Probable E3 ubiquitin-protein ligase LUL1 OS=Arabidopsis thaliana
GN=LUL1 PE=1 SV=1
Length = 337
Score = 41.6 bits (96), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 25/48 (52%)
Query: 390 VICCDAPRDCFFLPCGHCAGCFTCGTRIAEEGGTCPICRKKIKKVRKI 437
V+C PRD LPC H C C + + CP+CR+ ++ + +I
Sbjct: 286 VVCLSEPRDTTVLPCRHMCMCSGCAKALRFQTNLCPVCRQPVEMLLEI 333
>sp|Q24307|IAP2_DROME Apoptosis 2 inhibitor OS=Drosophila melanogaster GN=Iap2 PE=2 SV=3
Length = 498
Score = 41.6 bits (96), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 27/64 (42%), Gaps = 4/64 (6%)
Query: 375 SLNEGEINSNPRHLQVICCDAPRDCFFLPCGHCAGCFTCGTRIAEEGGTCPICRKKIKKV 434
SL E L +C D FLPCGH A C C +A CP+CR IK
Sbjct: 437 SLEEENRQLKDARLCKVCLDEEVGVVFLPCGHLATCNQCAPSVA----NCPMCRADIKGF 492
Query: 435 RKIF 438
+ F
Sbjct: 493 VRTF 496
>sp|Q6GNY1|MIB1_XENLA E3 ubiquitin-protein ligase mib1 OS=Xenopus laevis GN=mib1 PE=2
SV=1
Length = 1011
Score = 41.6 bits (96), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 6/59 (10%)
Query: 381 INSNPRHLQ--VICCDAPRDCFFLPCGHCAGCFTCGTRIAEEGGTCPICRKKIKKVRKI 437
IN++ L+ ++C D RD F PCGH A C C R+ + C +C+++++ KI
Sbjct: 810 INNDSETLEECMVCSDLKRDTLFGPCGHIATCSLCSPRVKK----CLLCKEQVQSRTKI 864
Score = 36.2 bits (82), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 26/43 (60%), Gaps = 6/43 (13%)
Query: 391 ICCDAPRDCFFLPCGHCAGCFTCGTRIAEEGGTCPICRKKIKK 433
+C D ++ F+ CGH C CG R++E CPICRK I++
Sbjct: 966 VCLDRLKNMIFM-CGH-GTCQLCGDRMSE----CPICRKAIER 1002
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.132 0.412
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 168,959,922
Number of Sequences: 539616
Number of extensions: 7017167
Number of successful extensions: 18612
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 117
Number of HSP's that attempted gapping in prelim test: 18473
Number of HSP's gapped (non-prelim): 189
length of query: 440
length of database: 191,569,459
effective HSP length: 121
effective length of query: 319
effective length of database: 126,275,923
effective search space: 40282019437
effective search space used: 40282019437
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)