Query 043585
Match_columns 287
No_of_seqs 148 out of 1286
Neff 8.1
Searched_HMMs 29240
Date Mon Mar 25 10:44:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043585.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/043585hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4a6d_A Hydroxyindole O-methylt 100.0 4E-49 1.4E-53 364.3 21.1 263 17-287 7-342 (353)
2 3p9c_A Caffeic acid O-methyltr 100.0 3E-44 1E-48 333.0 23.0 271 11-287 13-361 (364)
3 3reo_A (ISO)eugenol O-methyltr 100.0 5.1E-43 1.7E-47 325.1 23.4 271 11-287 14-363 (368)
4 3lst_A CALO1 methyltransferase 100.0 5.4E-43 1.9E-47 322.4 23.3 266 15-287 19-344 (348)
5 3i53_A O-methyltransferase; CO 100.0 1.3E-42 4.4E-47 317.5 14.2 262 18-287 5-328 (332)
6 3gwz_A MMCR; methyltransferase 100.0 5.1E-42 1.8E-46 318.4 18.3 265 16-287 36-365 (369)
7 1zg3_A Isoflavanone 4'-O-methy 100.0 3E-41 1E-45 311.8 19.7 274 12-287 4-355 (358)
8 1fp2_A Isoflavone O-methyltran 100.0 5.5E-41 1.9E-45 309.3 20.5 276 10-287 8-349 (352)
9 2ip2_A Probable phenazine-spec 100.0 1.9E-40 6.5E-45 303.1 19.6 260 17-287 7-330 (334)
10 1fp1_D Isoliquiritigenin 2'-O- 100.0 5.5E-40 1.9E-44 304.9 22.0 278 4-287 8-369 (372)
11 3dp7_A SAM-dependent methyltra 100.0 6.2E-39 2.1E-43 297.0 17.4 263 12-287 9-351 (363)
12 1qzz_A RDMB, aclacinomycin-10- 100.0 4.7E-37 1.6E-41 284.5 14.2 265 16-287 14-352 (374)
13 1tw3_A COMT, carminomycin 4-O- 100.0 8.9E-37 3E-41 281.5 15.2 263 18-287 19-352 (360)
14 3mcz_A O-methyltransferase; ad 100.0 9.3E-36 3.2E-40 273.9 16.5 255 14-286 20-344 (352)
15 1x19_A CRTF-related protein; m 100.0 1.8E-35 6E-40 273.1 18.0 258 11-287 23-355 (359)
16 2r3s_A Uncharacterized protein 100.0 1.5E-35 5.3E-40 270.1 15.4 256 19-287 7-331 (335)
17 4gek_A TRNA (CMO5U34)-methyltr 99.6 5E-15 1.7E-19 130.7 8.5 116 160-278 68-244 (261)
18 3dtn_A Putative methyltransfer 99.5 4.7E-14 1.6E-18 121.2 8.7 121 160-283 42-218 (234)
19 3hnr_A Probable methyltransfer 99.4 6.9E-13 2.3E-17 112.7 8.7 117 160-279 43-201 (220)
20 1ve3_A Hypothetical protein PH 99.4 2.1E-13 7E-18 116.3 5.2 123 161-287 37-223 (227)
21 1xtp_A LMAJ004091AAA; SGPP, st 99.4 6.9E-13 2.4E-17 115.0 8.6 119 160-281 91-240 (254)
22 3ou2_A SAM-dependent methyltra 99.4 2.9E-12 9.8E-17 108.3 12.0 118 160-280 44-206 (218)
23 3h2b_A SAM-dependent methyltra 99.4 5.8E-13 2E-17 111.9 6.9 116 163-281 42-184 (203)
24 3ujc_A Phosphoethanolamine N-m 99.4 1.9E-12 6.6E-17 112.7 10.3 118 159-279 52-206 (266)
25 3pfg_A N-methyltransferase; N, 99.4 2E-12 7E-17 113.1 10.3 118 161-281 49-239 (263)
26 3lcc_A Putative methyl chlorid 99.4 1.5E-12 5.3E-17 111.9 8.7 114 164-280 68-208 (235)
27 3vc1_A Geranyl diphosphate 2-C 99.4 4.1E-12 1.4E-16 114.3 11.8 114 160-279 115-269 (312)
28 3dh0_A SAM dependent methyltra 99.3 4.1E-12 1.4E-16 107.8 10.7 122 152-281 30-183 (219)
29 3e23_A Uncharacterized protein 99.3 1.5E-12 5.2E-17 110.1 7.2 117 160-279 41-182 (211)
30 2ex4_A Adrenal gland protein A 99.3 2.5E-12 8.6E-17 111.1 8.3 117 162-281 79-227 (241)
31 1vl5_A Unknown conserved prote 99.3 2.6E-12 8.8E-17 112.2 7.8 116 159-279 34-190 (260)
32 3dli_A Methyltransferase; PSI- 99.3 1.1E-11 3.8E-16 107.0 11.7 116 160-280 39-185 (240)
33 1xxl_A YCGJ protein; structura 99.3 3.5E-12 1.2E-16 110.2 7.8 120 152-279 14-174 (239)
34 2o57_A Putative sarcosine dime 99.3 6.1E-12 2.1E-16 111.9 9.5 115 160-279 80-234 (297)
35 3dlc_A Putative S-adenosyl-L-m 99.3 1.8E-12 6.1E-17 109.4 5.4 113 164-281 45-205 (219)
36 3ocj_A Putative exported prote 99.3 6.4E-12 2.2E-16 112.7 9.3 117 160-279 116-291 (305)
37 2qe6_A Uncharacterized protein 99.3 5.7E-12 1.9E-16 111.8 8.8 110 161-275 76-238 (274)
38 3g2m_A PCZA361.24; SAM-depende 99.3 5.3E-12 1.8E-16 112.7 8.5 116 162-280 82-275 (299)
39 3bus_A REBM, methyltransferase 99.3 8.8E-12 3E-16 109.4 9.0 120 152-279 54-216 (273)
40 1kpg_A CFA synthase;, cyclopro 99.3 1.3E-11 4.3E-16 109.4 9.9 118 159-279 61-228 (287)
41 3g5l_A Putative S-adenosylmeth 99.3 1.1E-11 3.7E-16 107.7 8.9 114 161-279 43-216 (253)
42 3i9f_A Putative type 11 methyl 99.3 9.4E-12 3.2E-16 101.5 8.1 114 159-281 14-150 (170)
43 3l8d_A Methyltransferase; stru 99.3 1.1E-11 3.9E-16 106.5 9.0 115 160-279 51-200 (242)
44 3f4k_A Putative methyltransfer 99.3 1.3E-11 4.4E-16 107.2 8.7 115 160-280 44-197 (257)
45 2p7i_A Hypothetical protein; p 99.2 1.3E-11 4.4E-16 106.1 8.4 114 161-279 41-199 (250)
46 1nkv_A Hypothetical protein YJ 99.2 9.3E-12 3.2E-16 108.1 7.5 116 159-279 33-187 (256)
47 3kkz_A Uncharacterized protein 99.2 1.5E-11 5.1E-16 107.8 8.0 115 160-280 44-197 (267)
48 3sm3_A SAM-dependent methyltra 99.2 1.7E-11 5.8E-16 104.6 8.1 117 160-279 28-207 (235)
49 3bxo_A N,N-dimethyltransferase 99.2 1.9E-11 6.6E-16 104.8 8.5 122 161-285 39-233 (239)
50 1pjz_A Thiopurine S-methyltran 99.2 1.7E-11 6E-16 103.6 6.4 116 160-279 20-176 (203)
51 2fk8_A Methoxy mycolic acid sy 99.2 7.4E-11 2.5E-15 106.1 10.9 118 159-279 87-254 (318)
52 3bkw_A MLL3908 protein, S-aden 99.2 3.6E-11 1.2E-15 103.3 8.5 114 161-279 42-214 (243)
53 3hem_A Cyclopropane-fatty-acyl 99.2 9.5E-11 3.2E-15 104.7 10.8 119 159-280 69-244 (302)
54 3cgg_A SAM-dependent methyltra 99.2 2E-10 6.8E-15 94.8 11.3 111 160-279 44-175 (195)
55 2ld4_A Anamorsin; methyltransf 99.2 7.1E-11 2.4E-15 97.0 8.1 110 159-274 9-130 (176)
56 4fsd_A Arsenic methyltransfera 99.1 8.1E-11 2.8E-15 109.1 9.0 114 160-278 81-250 (383)
57 2zfu_A Nucleomethylin, cerebra 99.1 3.5E-10 1.2E-14 95.7 11.4 110 161-282 66-182 (215)
58 3d2l_A SAM-dependent methyltra 99.1 1.8E-10 6.2E-15 98.9 9.5 116 161-279 32-223 (243)
59 2xvm_A Tellurite resistance pr 99.1 1.3E-10 4.4E-15 96.6 7.8 115 160-279 30-173 (199)
60 4htf_A S-adenosylmethionine-de 99.1 1.4E-10 4.6E-15 102.6 8.3 115 162-281 68-234 (285)
61 3ggd_A SAM-dependent methyltra 99.1 1.1E-10 3.9E-15 100.7 7.7 115 160-279 54-219 (245)
62 3ccf_A Cyclopropane-fatty-acyl 99.1 1.6E-10 5.4E-15 102.0 8.7 120 152-279 50-210 (279)
63 3ege_A Putative methyltransfer 99.1 4.4E-10 1.5E-14 98.3 11.5 114 159-279 31-178 (261)
64 1y8c_A S-adenosylmethionine-de 99.1 1.3E-10 4.6E-15 99.6 8.0 115 162-279 37-225 (246)
65 3mgg_A Methyltransferase; NYSG 99.1 7.4E-11 2.5E-15 103.7 6.1 116 159-279 34-198 (276)
66 3e8s_A Putative SAM dependent 99.1 1E-10 3.5E-15 99.1 5.6 114 160-279 50-209 (227)
67 1vlm_A SAM-dependent methyltra 99.1 3.9E-10 1.3E-14 95.9 9.1 111 163-279 48-188 (219)
68 2gb4_A Thiopurine S-methyltran 99.1 3.5E-10 1.2E-14 99.0 8.5 115 161-279 67-227 (252)
69 2p8j_A S-adenosylmethionine-de 99.1 2.7E-10 9.4E-15 95.6 7.4 113 161-276 22-180 (209)
70 3jwh_A HEN1; methyltransferase 99.0 4.5E-10 1.5E-14 95.2 8.3 112 161-275 28-188 (217)
71 3jwg_A HEN1, methyltransferase 99.0 6.7E-10 2.3E-14 94.2 9.3 113 161-276 28-189 (219)
72 1ri5_A MRNA capping enzyme; me 99.0 6E-10 2.1E-14 98.5 8.9 118 160-280 62-251 (298)
73 3cc8_A Putative methyltransfer 99.0 8.4E-10 2.9E-14 93.5 9.2 114 161-280 31-186 (230)
74 3gu3_A Methyltransferase; alph 99.0 2.2E-10 7.4E-15 101.6 5.5 114 159-277 19-188 (284)
75 3g07_A 7SK snRNA methylphospha 99.0 1.1E-10 3.9E-15 104.1 3.5 89 188-279 154-269 (292)
76 3bkx_A SAM-dependent methyltra 99.0 6.8E-10 2.3E-14 97.3 7.9 116 159-279 40-219 (275)
77 2a14_A Indolethylamine N-methy 99.0 2.2E-10 7.4E-15 100.6 4.1 85 192-279 138-238 (263)
78 2p35_A Trans-aconitate 2-methy 99.0 1.1E-09 3.9E-14 94.8 7.5 111 159-274 30-185 (259)
79 2kw5_A SLR1183 protein; struct 98.9 2.5E-09 8.4E-14 89.4 8.9 108 165-279 32-171 (202)
80 1wzn_A SAM-dependent methyltra 98.9 3.3E-09 1.1E-13 91.7 9.6 115 161-279 40-231 (252)
81 2i62_A Nicotinamide N-methyltr 98.9 8.2E-10 2.8E-14 96.0 5.7 88 190-280 136-240 (265)
82 3m70_A Tellurite resistance pr 98.9 1.7E-09 5.7E-14 95.6 6.9 114 160-278 118-259 (286)
83 2yqz_A Hypothetical protein TT 98.9 1.1E-09 3.9E-14 94.9 5.3 112 160-277 37-194 (263)
84 2g72_A Phenylethanolamine N-me 98.9 1.3E-09 4.5E-14 96.6 5.5 87 191-280 153-257 (289)
85 4hg2_A Methyltransferase type 98.9 4.5E-09 1.5E-13 92.2 8.4 83 161-249 38-139 (257)
86 3grz_A L11 mtase, ribosomal pr 98.8 1.4E-09 4.8E-14 91.3 4.2 111 160-286 58-192 (205)
87 2vdw_A Vaccinia virus capping 98.8 6.5E-09 2.2E-13 93.3 8.3 115 162-279 48-246 (302)
88 3giw_A Protein of unknown func 98.8 3.3E-09 1.1E-13 93.7 6.0 109 161-274 77-242 (277)
89 3q87_B N6 adenine specific DNA 98.8 3.5E-08 1.2E-12 80.7 11.6 104 161-279 22-149 (170)
90 3thr_A Glycine N-methyltransfe 98.8 6.6E-09 2.2E-13 91.9 7.0 84 160-246 55-176 (293)
91 2aot_A HMT, histamine N-methyl 98.8 1.1E-08 3.7E-13 90.9 8.0 69 203-276 135-218 (292)
92 4e2x_A TCAB9; kijanose, tetron 98.8 3.5E-09 1.2E-13 98.7 4.2 120 152-280 100-254 (416)
93 3e05_A Precorrin-6Y C5,15-meth 98.7 4.5E-08 1.6E-12 82.0 9.5 98 159-272 37-161 (204)
94 3ofk_A Nodulation protein S; N 98.7 1.2E-08 4.2E-13 86.0 5.1 111 160-274 49-183 (216)
95 2gs9_A Hypothetical protein TT 98.7 2.3E-08 7.9E-13 84.0 6.8 102 162-270 36-171 (211)
96 3g5t_A Trans-aconitate 3-methy 98.7 2.2E-08 7.5E-13 89.1 6.3 105 161-271 35-196 (299)
97 2nxc_A L11 mtase, ribosomal pr 98.6 5.1E-08 1.7E-12 85.1 6.1 109 161-285 119-250 (254)
98 3bgv_A MRNA CAP guanine-N7 met 98.6 2.6E-07 8.8E-12 82.7 9.8 116 161-279 33-232 (313)
99 1fbn_A MJ fibrillarin homologu 98.5 9.4E-08 3.2E-12 81.8 6.5 113 159-281 71-215 (230)
100 1dus_A MJ0882; hypothetical pr 98.5 1.4E-07 4.9E-12 77.3 7.2 108 159-279 49-182 (194)
101 3hm2_A Precorrin-6Y C5,15-meth 98.5 1.1E-07 3.6E-12 77.4 6.2 101 159-277 22-151 (178)
102 4df3_A Fibrillarin-like rRNA/T 98.5 8.6E-08 2.9E-12 82.8 5.6 116 159-281 74-219 (233)
103 1zx0_A Guanidinoacetate N-meth 98.5 9.4E-09 3.2E-13 88.3 -0.6 110 161-273 59-204 (236)
104 3njr_A Precorrin-6Y methylase; 98.5 2.6E-07 8.9E-12 77.8 8.2 102 159-278 52-179 (204)
105 3mti_A RRNA methylase; SAM-dep 98.5 8.3E-08 2.8E-12 78.9 4.7 118 160-280 20-170 (185)
106 1yb2_A Hypothetical protein TA 98.5 4.7E-08 1.6E-12 86.1 3.2 103 159-279 107-237 (275)
107 3orh_A Guanidinoacetate N-meth 98.5 1E-08 3.5E-13 88.5 -1.9 109 161-274 59-205 (236)
108 3m33_A Uncharacterized protein 98.5 4.1E-08 1.4E-12 83.8 1.9 99 161-279 47-167 (226)
109 3bwc_A Spermidine synthase; SA 98.5 1.8E-07 6.1E-12 83.9 6.1 112 161-279 94-240 (304)
110 2b3t_A Protein methyltransfera 98.4 3.2E-07 1.1E-11 80.7 7.5 110 161-282 108-267 (276)
111 3uwp_A Histone-lysine N-methyl 98.4 1E-07 3.5E-12 88.6 4.4 89 159-253 170-296 (438)
112 3evz_A Methyltransferase; NYSG 98.4 3.1E-07 1E-11 78.1 6.8 112 160-281 53-208 (230)
113 2pxx_A Uncharacterized protein 98.4 1.3E-07 4.3E-12 79.2 4.2 98 161-271 41-175 (215)
114 4dzr_A Protein-(glutamine-N5) 98.4 5.6E-08 1.9E-12 81.3 2.0 108 161-279 29-192 (215)
115 3mq2_A 16S rRNA methyltransfer 98.4 1.6E-07 5.6E-12 79.3 4.8 117 159-280 24-185 (218)
116 3p2e_A 16S rRNA methylase; met 98.4 6.1E-07 2.1E-11 76.8 8.2 117 160-280 22-186 (225)
117 3mb5_A SAM-dependent methyltra 98.4 1.9E-07 6.4E-12 80.9 4.8 103 159-279 90-222 (255)
118 1l3i_A Precorrin-6Y methyltran 98.4 1.9E-07 6.5E-12 76.4 4.4 100 159-274 30-155 (192)
119 3htx_A HEN1; HEN1, small RNA m 98.4 1.3E-06 4.4E-11 87.3 10.7 82 161-246 720-835 (950)
120 2yxd_A Probable cobalt-precorr 98.4 4.9E-07 1.7E-11 73.4 6.6 99 159-276 32-154 (183)
121 1af7_A Chemotaxis receptor met 98.4 1.9E-07 6.4E-12 82.6 4.3 52 189-243 195-250 (274)
122 3iv6_A Putative Zn-dependent a 98.4 3.1E-07 1.1E-11 80.6 5.6 81 159-245 42-148 (261)
123 3fzg_A 16S rRNA methylase; met 98.3 1.7E-07 6E-12 78.2 3.0 114 160-281 47-189 (200)
124 3b3j_A Histone-arginine methyl 98.3 1.8E-07 6.1E-12 89.2 3.2 82 159-243 155-261 (480)
125 2ipx_A RRNA 2'-O-methyltransfe 98.3 3.1E-07 1.1E-11 78.6 4.2 113 159-280 74-218 (233)
126 3eey_A Putative rRNA methylase 98.3 2.6E-07 8.9E-12 76.7 3.4 117 160-279 20-173 (197)
127 2qm3_A Predicted methyltransfe 98.3 2.3E-06 7.8E-11 78.8 9.8 105 162-279 172-309 (373)
128 1xdz_A Methyltransferase GIDB; 98.3 3.2E-07 1.1E-11 79.0 3.8 103 161-278 69-201 (240)
129 2pwy_A TRNA (adenine-N(1)-)-me 98.3 6E-07 2.1E-11 77.5 5.0 102 159-278 93-223 (258)
130 3lcv_B Sisomicin-gentamicin re 98.3 5.1E-07 1.7E-11 78.9 4.4 113 161-277 131-270 (281)
131 3lpm_A Putative methyltransfer 98.3 1.7E-06 6E-11 75.2 7.9 108 160-279 46-201 (259)
132 3kr9_A SAM-dependent methyltra 98.3 1.9E-06 6.3E-11 74.0 7.9 100 161-277 14-141 (225)
133 2h00_A Methyltransferase 10 do 98.2 4.3E-08 1.5E-12 85.0 -3.0 115 162-279 65-238 (254)
134 3fpf_A Mtnas, putative unchara 98.2 1.1E-06 3.7E-11 78.4 6.0 80 159-246 119-223 (298)
135 1yzh_A TRNA (guanine-N(7)-)-me 98.2 2.3E-06 8E-11 72.1 7.7 104 162-277 41-180 (214)
136 2frn_A Hypothetical protein PH 98.2 2.2E-06 7.6E-11 75.6 7.5 104 161-275 124-253 (278)
137 3id6_C Fibrillarin-like rRNA/T 98.2 3E-06 1E-10 73.1 7.7 114 159-280 73-217 (232)
138 1g8a_A Fibrillarin-like PRE-rR 98.2 6E-06 2E-10 70.0 9.4 111 160-280 71-213 (227)
139 3hp7_A Hemolysin, putative; st 98.2 2.2E-06 7.4E-11 76.4 6.6 115 162-284 85-239 (291)
140 1nt2_A Fibrillarin-like PRE-rR 98.2 2.6E-06 8.8E-11 72.1 6.4 109 160-279 55-195 (210)
141 3dmg_A Probable ribosomal RNA 98.2 1.8E-07 6E-12 86.6 -1.0 109 162-280 233-374 (381)
142 3lec_A NADB-rossmann superfami 98.2 4.3E-06 1.5E-10 71.9 7.7 102 160-278 19-148 (230)
143 3bzb_A Uncharacterized protein 98.1 4.3E-06 1.5E-10 73.8 7.8 111 161-278 78-236 (281)
144 2avn_A Ubiquinone/menaquinone 98.1 8E-07 2.7E-11 77.3 3.0 113 162-281 54-215 (260)
145 2y1w_A Histone-arginine methyl 98.1 6E-07 2.1E-11 81.9 2.3 81 160-243 48-153 (348)
146 1o54_A SAM-dependent O-methylt 98.1 1.2E-06 4E-11 77.0 3.1 103 159-279 109-239 (277)
147 1jsx_A Glucose-inhibited divis 98.1 1.1E-06 3.7E-11 73.4 2.7 96 162-277 65-186 (207)
148 2pjd_A Ribosomal RNA small sub 98.1 1.2E-06 4E-11 79.7 2.7 84 161-247 195-305 (343)
149 3g89_A Ribosomal RNA small sub 98.1 1E-06 3.6E-11 76.6 2.3 104 161-279 79-212 (249)
150 3frh_A 16S rRNA methylase; met 98.1 3.1E-06 1.1E-10 73.1 5.1 116 161-281 104-243 (253)
151 1ej0_A FTSJ; methyltransferase 98.1 1.2E-05 4E-10 64.4 8.1 104 160-279 20-161 (180)
152 2fca_A TRNA (guanine-N(7)-)-me 98.0 9.4E-06 3.2E-10 68.6 7.6 104 162-277 38-177 (213)
153 3gnl_A Uncharacterized protein 98.0 9.1E-06 3.1E-10 70.4 7.2 101 160-277 19-147 (244)
154 1jg1_A PIMT;, protein-L-isoasp 98.0 2.4E-06 8.1E-11 73.1 3.2 76 159-245 88-189 (235)
155 3q7e_A Protein arginine N-meth 98.0 4.2E-06 1.4E-10 76.3 4.8 80 160-242 64-170 (349)
156 3opn_A Putative hemolysin; str 98.0 1.1E-06 3.7E-11 75.8 0.5 108 162-279 37-184 (232)
157 3p9n_A Possible methyltransfer 98.0 1E-05 3.5E-10 66.6 6.3 84 161-248 43-156 (189)
158 3r3h_A O-methyltransferase, SA 98.0 5.6E-06 1.9E-10 71.6 4.6 111 160-279 58-210 (242)
159 3ntv_A MW1564 protein; rossman 97.9 5E-06 1.7E-10 71.1 3.9 82 160-249 69-180 (232)
160 3tfw_A Putative O-methyltransf 97.9 5.8E-06 2E-10 71.5 4.1 112 160-279 61-211 (248)
161 3lbf_A Protein-L-isoaspartate 97.9 6.2E-06 2.1E-10 68.9 4.1 77 159-246 74-175 (210)
162 4dcm_A Ribosomal RNA large sub 97.9 5.5E-06 1.9E-10 76.4 4.1 81 162-245 222-334 (375)
163 3u81_A Catechol O-methyltransf 97.9 7.5E-06 2.6E-10 69.3 4.6 101 160-274 56-192 (221)
164 1ixk_A Methyltransferase; open 97.9 1.1E-05 3.9E-10 72.4 5.8 110 159-276 115-272 (315)
165 1g6q_1 HnRNP arginine N-methyl 97.9 8.2E-06 2.8E-10 73.7 4.8 79 161-242 37-142 (328)
166 3tr6_A O-methyltransferase; ce 97.9 7.7E-06 2.6E-10 69.1 4.4 111 160-279 62-214 (225)
167 1u2z_A Histone-lysine N-methyl 97.9 1.2E-05 4.2E-10 75.3 6.1 88 159-252 239-366 (433)
168 3r0q_C Probable protein argini 97.9 5E-06 1.7E-10 76.6 3.1 85 160-247 61-171 (376)
169 3duw_A OMT, O-methyltransferas 97.9 7.2E-06 2.5E-10 69.2 3.8 111 160-279 56-207 (223)
170 2fyt_A Protein arginine N-meth 97.9 1.1E-05 3.9E-10 73.2 5.0 80 160-242 62-168 (340)
171 2bm8_A Cephalosporin hydroxyla 97.8 2.6E-05 8.9E-10 67.0 6.4 102 162-275 81-215 (236)
172 1vbf_A 231AA long hypothetical 97.8 1.4E-05 4.9E-10 67.7 4.4 77 159-246 67-166 (231)
173 3adn_A Spermidine synthase; am 97.8 1.2E-05 3.9E-10 71.8 3.8 110 161-278 82-226 (294)
174 3dr5_A Putative O-methyltransf 97.8 1E-05 3.5E-10 69.0 3.3 108 164-280 58-204 (221)
175 2hnk_A SAM-dependent O-methylt 97.8 1.3E-05 4.4E-10 68.7 3.9 113 160-280 58-222 (239)
176 1i9g_A Hypothetical protein RV 97.8 2.1E-05 7E-10 68.8 5.1 102 159-278 96-229 (280)
177 2ozv_A Hypothetical protein AT 97.7 3E-05 1E-09 67.5 5.7 107 160-279 34-194 (260)
178 1o9g_A RRNA methyltransferase; 97.7 2.8E-05 9.6E-10 67.0 5.5 53 192-247 149-216 (250)
179 2yvl_A TRMI protein, hypotheti 97.7 3.1E-05 1.1E-09 66.2 5.1 101 159-278 88-214 (248)
180 2yxe_A Protein-L-isoaspartate 97.7 2.6E-05 8.8E-10 65.3 4.3 76 159-245 74-177 (215)
181 2gpy_A O-methyltransferase; st 97.7 2.2E-05 7.6E-10 66.8 3.9 81 160-248 52-163 (233)
182 1iy9_A Spermidine synthase; ro 97.7 3.5E-05 1.2E-09 67.9 4.9 110 161-278 74-217 (275)
183 2b25_A Hypothetical protein; s 97.7 6.1E-06 2.1E-10 74.5 -0.2 111 159-279 102-281 (336)
184 2xyq_A Putative 2'-O-methyl tr 97.7 5E-05 1.7E-09 67.5 5.7 79 188-277 105-195 (290)
185 1ws6_A Methyltransferase; stru 97.7 1.6E-05 5.3E-10 63.8 2.2 81 162-247 41-149 (171)
186 2i7c_A Spermidine synthase; tr 97.6 3.2E-05 1.1E-09 68.4 4.3 110 161-278 77-220 (283)
187 2avd_A Catechol-O-methyltransf 97.6 2.2E-05 7.4E-10 66.5 3.1 81 160-248 67-182 (229)
188 3k6r_A Putative transferase PH 97.6 5.6E-05 1.9E-09 66.8 5.8 104 160-274 123-252 (278)
189 3gjy_A Spermidine synthase; AP 97.6 2.7E-05 9.1E-10 70.1 3.6 107 163-278 90-227 (317)
190 3gdh_A Trimethylguanosine synt 97.6 1E-06 3.5E-11 75.5 -5.6 114 162-281 78-221 (241)
191 2ift_A Putative methylase HI07 97.6 1.5E-05 5E-10 66.7 1.7 80 162-247 53-165 (201)
192 4hc4_A Protein arginine N-meth 97.6 4.4E-05 1.5E-09 70.3 4.9 78 162-242 83-186 (376)
193 2p41_A Type II methyltransfera 97.6 9.6E-05 3.3E-09 66.1 7.0 81 160-243 80-189 (305)
194 1mjf_A Spermidine synthase; sp 97.6 9.2E-05 3.1E-09 65.3 6.5 110 161-278 74-221 (281)
195 2plw_A Ribosomal RNA methyltra 97.6 0.00025 8.5E-09 58.5 8.7 106 160-277 20-177 (201)
196 3sso_A Methyltransferase; macr 97.6 6.4E-05 2.2E-09 69.6 5.3 79 161-247 215-326 (419)
197 3dxy_A TRNA (guanine-N(7)-)-me 97.6 3.1E-05 1E-09 65.8 2.9 80 162-245 34-150 (218)
198 1p91_A Ribosomal RNA large sub 97.6 6.6E-05 2.3E-09 65.1 5.1 76 161-248 84-181 (269)
199 3dou_A Ribosomal RNA large sub 97.5 0.00012 4.2E-09 60.7 6.4 104 160-279 23-164 (191)
200 2pt6_A Spermidine synthase; tr 97.5 5.7E-05 1.9E-09 68.1 4.6 109 161-278 115-258 (321)
201 2esr_A Methyltransferase; stru 97.5 1E-05 3.5E-10 65.7 -0.5 83 160-248 29-141 (177)
202 2fhp_A Methylase, putative; al 97.5 2.1E-05 7.1E-10 64.1 1.2 81 161-247 43-156 (187)
203 1dl5_A Protein-L-isoaspartate 97.5 6.9E-05 2.3E-09 67.1 4.5 77 159-246 72-176 (317)
204 1ne2_A Hypothetical protein TA 97.5 0.00016 5.5E-09 59.8 6.4 101 161-277 50-168 (200)
205 1uir_A Polyamine aminopropyltr 97.5 8.6E-05 2.9E-09 66.6 5.0 110 161-277 76-223 (314)
206 4azs_A Methyltransferase WBDD; 97.5 8.8E-06 3E-10 79.0 -1.7 110 160-272 64-201 (569)
207 1nv8_A HEMK protein; class I a 97.5 0.00012 4.2E-09 64.6 5.6 79 162-243 123-247 (284)
208 2oxt_A Nucleoside-2'-O-methylt 97.5 0.0002 7E-09 62.7 6.9 82 160-245 72-185 (265)
209 1inl_A Spermidine synthase; be 97.4 6.9E-05 2.4E-09 66.7 3.8 109 162-278 90-233 (296)
210 1wy7_A Hypothetical protein PH 97.4 0.00031 1E-08 58.3 7.6 105 161-278 48-174 (207)
211 2wa2_A Non-structural protein 97.4 0.00027 9.1E-09 62.3 7.4 81 160-244 80-192 (276)
212 2fpo_A Methylase YHHF; structu 97.4 5.2E-05 1.8E-09 63.3 2.4 80 162-247 54-162 (202)
213 3tma_A Methyltransferase; thum 97.4 0.00029 1E-08 63.9 7.5 106 159-279 200-339 (354)
214 3c3p_A Methyltransferase; NP_9 97.4 5E-05 1.7E-09 63.5 2.2 80 161-248 55-163 (210)
215 3cbg_A O-methyltransferase; cy 97.4 4.3E-05 1.5E-09 65.3 1.8 81 161-249 71-186 (232)
216 2vdv_E TRNA (guanine-N(7)-)-me 97.4 6.8E-05 2.3E-09 64.5 2.9 76 161-244 48-172 (246)
217 1rjd_A PPM1P, carboxy methyl t 97.4 0.00062 2.1E-08 61.6 9.2 108 161-272 96-281 (334)
218 1sui_A Caffeoyl-COA O-methyltr 97.4 8.3E-05 2.8E-09 64.3 3.3 81 160-248 77-193 (247)
219 2igt_A SAM dependent methyltra 97.4 0.0003 1E-08 63.6 6.9 103 162-274 153-299 (332)
220 2b2c_A Spermidine synthase; be 97.3 4.8E-05 1.6E-09 68.4 1.5 108 161-277 107-249 (314)
221 1zq9_A Probable dimethyladenos 97.3 7.2E-05 2.5E-09 66.1 2.3 80 159-242 25-144 (285)
222 3c3y_A Pfomt, O-methyltransfer 97.3 9E-05 3.1E-09 63.5 2.7 80 160-247 68-183 (237)
223 3ajd_A Putative methyltransfer 97.3 0.00019 6.4E-09 62.9 4.6 110 159-276 80-238 (274)
224 2o07_A Spermidine synthase; st 97.3 5.2E-05 1.8E-09 67.8 0.9 109 161-277 94-236 (304)
225 3tm4_A TRNA (guanine N2-)-meth 97.3 0.00032 1.1E-08 64.4 6.2 104 160-279 215-352 (373)
226 2cmg_A Spermidine synthase; tr 97.3 0.00027 9.1E-09 61.8 5.3 104 161-279 71-200 (262)
227 3ckk_A TRNA (guanine-N(7)-)-me 97.3 0.00032 1.1E-08 60.1 5.7 81 161-245 45-168 (235)
228 1xj5_A Spermidine synthase 1; 97.2 0.00012 4.2E-09 66.3 2.9 81 161-244 119-234 (334)
229 2yxl_A PH0851 protein, 450AA l 97.2 0.00049 1.7E-08 64.7 6.9 109 160-276 257-416 (450)
230 3b5i_A S-adenosyl-L-methionine 97.2 0.003 1E-07 58.0 11.3 85 192-279 136-298 (374)
231 3a27_A TYW2, uncharacterized p 97.2 0.00027 9.1E-09 61.9 4.1 101 160-272 117-244 (272)
232 1i1n_A Protein-L-isoaspartate 97.1 0.00039 1.3E-08 58.5 4.1 76 160-246 75-183 (226)
233 3m6w_A RRNA methylase; rRNA me 97.0 0.00041 1.4E-08 65.6 4.2 109 159-276 98-256 (464)
234 2frx_A Hypothetical protein YE 97.0 0.0015 5.2E-08 61.9 8.1 101 162-270 117-266 (479)
235 1r18_A Protein-L-isoaspartate( 97.0 0.00037 1.3E-08 58.9 3.2 47 188-245 145-194 (227)
236 2nyu_A Putative ribosomal RNA 96.9 0.0011 3.6E-08 54.3 5.6 106 160-277 20-168 (196)
237 3iei_A Leucine carboxyl methyl 96.9 0.0043 1.5E-07 56.0 9.9 139 136-279 65-281 (334)
238 2uyo_A Hypothetical protein ML 96.9 0.0016 5.5E-08 58.2 6.6 116 152-274 95-274 (310)
239 3m4x_A NOL1/NOP2/SUN family pr 96.9 0.00048 1.6E-08 64.9 3.3 111 159-277 102-261 (456)
240 2yx1_A Hypothetical protein MJ 96.8 0.00097 3.3E-08 60.2 5.0 99 161-277 194-315 (336)
241 2ih2_A Modification methylase 96.8 0.0028 9.6E-08 58.4 8.2 100 162-271 39-186 (421)
242 2f8l_A Hypothetical protein LM 96.8 0.0015 5E-08 59.1 6.0 104 162-272 130-279 (344)
243 2pbf_A Protein-L-isoaspartate 96.8 0.0008 2.7E-08 56.6 3.8 76 160-246 78-194 (227)
244 2h1r_A Dimethyladenosine trans 96.8 0.0016 5.5E-08 57.8 5.7 67 159-226 39-128 (299)
245 1m6e_X S-adenosyl-L-methionnin 96.7 0.013 4.5E-07 53.3 11.1 83 192-277 125-278 (359)
246 1yub_A Ermam, rRNA methyltrans 96.6 0.0013 4.4E-08 56.4 4.0 84 159-245 26-145 (245)
247 1sqg_A SUN protein, FMU protei 96.6 0.0019 6.5E-08 60.2 5.3 107 160-274 244-399 (429)
248 2efj_A 3,7-dimethylxanthine me 96.6 0.0057 2E-07 56.2 8.1 82 193-277 136-290 (384)
249 4gqb_A Protein arginine N-meth 96.5 0.0015 5E-08 64.0 3.8 113 122-242 322-464 (637)
250 1uwv_A 23S rRNA (uracil-5-)-me 96.3 0.0095 3.2E-07 55.6 8.2 103 160-280 284-415 (433)
251 2as0_A Hypothetical protein PH 96.3 0.001 3.6E-08 61.3 1.2 82 162-246 217-336 (396)
252 2b78_A Hypothetical protein SM 96.3 0.0021 7.3E-08 59.1 3.3 109 161-279 211-362 (385)
253 1wxx_A TT1595, hypothetical pr 96.3 0.0016 5.5E-08 59.7 2.4 107 162-274 209-351 (382)
254 1qam_A ERMC' methyltransferase 96.2 0.0041 1.4E-07 53.4 4.5 67 159-225 27-115 (244)
255 3v97_A Ribosomal RNA large sub 96.0 0.0053 1.8E-07 60.9 4.8 103 162-276 539-679 (703)
256 4dmg_A Putative uncharacterize 95.9 0.01 3.4E-07 54.8 5.8 103 162-274 214-352 (393)
257 3c0k_A UPF0064 protein YCCW; P 95.8 0.0029 1E-07 58.3 1.9 108 161-275 219-366 (396)
258 3o4f_A Spermidine synthase; am 95.8 0.0072 2.4E-07 53.6 4.3 109 161-278 82-226 (294)
259 2qfm_A Spermine synthase; sper 95.8 0.0049 1.7E-07 56.2 3.2 81 161-244 187-313 (364)
260 3gru_A Dimethyladenosine trans 95.0 0.015 5.3E-07 51.4 3.9 67 159-226 47-136 (295)
261 2jjq_A Uncharacterized RNA met 94.7 0.029 9.9E-07 52.3 5.0 75 161-244 289-386 (425)
262 3k0b_A Predicted N6-adenine-sp 94.3 0.058 2E-06 49.6 5.8 59 187-246 289-351 (393)
263 3evf_A RNA-directed RNA polyme 93.7 0.14 4.6E-06 44.8 6.8 38 203-243 140-182 (277)
264 3ldg_A Putative uncharacterize 93.7 0.15 5.2E-06 46.7 7.5 59 187-246 282-344 (384)
265 3fut_A Dimethyladenosine trans 93.3 0.086 2.9E-06 46.0 4.9 68 159-227 44-133 (271)
266 3ua3_A Protein arginine N-meth 93.3 0.062 2.1E-06 53.0 4.4 110 122-242 377-531 (745)
267 3ftd_A Dimethyladenosine trans 93.1 0.12 4.3E-06 44.3 5.5 67 159-225 28-116 (249)
268 3bt7_A TRNA (uracil-5-)-methyl 92.8 0.017 5.9E-07 52.6 -0.4 98 163-280 214-352 (369)
269 2r6z_A UPF0341 protein in RSP 92.8 0.078 2.7E-06 45.8 3.8 56 160-215 81-173 (258)
270 2okc_A Type I restriction enzy 92.7 0.055 1.9E-06 50.5 3.0 77 189-273 237-333 (445)
271 3ldu_A Putative methylase; str 91.9 0.18 6.2E-06 46.1 5.3 59 187-246 283-345 (385)
272 3tqs_A Ribosomal RNA small sub 91.6 0.11 3.6E-06 45.0 3.2 68 159-226 26-118 (255)
273 4auk_A Ribosomal RNA large sub 90.3 0.34 1.2E-05 44.1 5.4 114 160-279 209-341 (375)
274 3c6k_A Spermine synthase; sper 90.3 0.11 3.9E-06 47.4 2.2 100 162-269 205-350 (381)
275 2px2_A Genome polyprotein [con 88.8 1.1 3.6E-05 38.8 7.0 82 159-243 70-181 (269)
276 2b9e_A NOL1/NOP2/SUN domain fa 88.0 0.61 2.1E-05 41.3 5.3 107 159-274 99-260 (309)
277 1m6y_A S-adenosyl-methyltransf 87.2 0.23 7.9E-06 43.9 2.0 52 159-210 23-105 (301)
278 3gcz_A Polyprotein; flavivirus 86.9 0.63 2.2E-05 40.6 4.6 38 203-243 156-199 (282)
279 2zwa_A Leucine carboxyl methyl 86.5 3.6 0.00012 40.3 10.4 87 188-279 188-309 (695)
280 3uzu_A Ribosomal RNA small sub 85.5 0.24 8E-06 43.3 1.1 61 159-219 39-129 (279)
281 3axs_A Probable N(2),N(2)-dime 82.8 0.22 7.4E-06 45.8 -0.4 74 162-244 52-157 (392)
282 3v97_A Ribosomal RNA large sub 81.8 1.9 6.5E-05 42.6 6.0 57 187-246 282-348 (703)
283 3eld_A Methyltransferase; flav 81.1 3.6 0.00012 36.1 6.8 50 192-244 134-190 (300)
284 1qyr_A KSGA, high level kasuga 81.0 0.57 1.9E-05 40.2 1.7 67 159-225 18-111 (252)
285 2ar0_A M.ecoki, type I restric 80.4 0.96 3.3E-05 43.2 3.2 81 190-280 244-343 (541)
286 3ll7_A Putative methyltransfer 80.1 0.38 1.3E-05 44.5 0.2 48 162-209 93-169 (410)
287 2qy6_A UPF0209 protein YFCK; s 79.9 1.2 4.1E-05 38.2 3.4 73 188-279 150-235 (257)
288 3r24_A NSP16, 2'-O-methyl tran 78.3 2.6 9E-05 37.2 5.0 75 191-278 155-240 (344)
289 2vz8_A Fatty acid synthase; tr 76.7 0.75 2.6E-05 51.9 1.3 70 203-277 1311-1393(2512)
290 2k4m_A TR8_protein, UPF0146 pr 76.0 5.9 0.0002 31.2 6.0 68 161-233 34-114 (153)
291 2oyr_A UPF0341 protein YHIQ; a 73.3 1.2 4.3E-05 38.2 1.6 57 159-215 83-176 (258)
292 2dul_A N(2),N(2)-dimethylguano 73.0 1.4 4.9E-05 40.0 2.0 46 190-244 114-163 (378)
293 3vyw_A MNMC2; tRNA wobble urid 71.0 3.1 0.00011 36.8 3.7 72 191-281 169-250 (308)
294 3s1s_A Restriction endonucleas 66.8 12 0.0004 37.7 7.1 51 222-280 445-497 (878)
295 3khk_A Type I restriction-modi 63.3 3.7 0.00013 39.2 2.7 86 188-281 310-428 (544)
296 3lkd_A Type I restriction-modi 63.2 7.6 0.00026 37.0 4.9 110 162-281 221-390 (542)
297 3cvo_A Methyltransferase-like 62.6 22 0.00074 29.2 7.0 78 160-248 28-156 (202)
298 2zig_A TTHA0409, putative modi 62.5 15 0.0005 31.8 6.3 87 187-276 19-133 (297)
299 3g7u_A Cytosine-specific methy 53.4 34 0.0012 30.7 7.3 79 188-273 45-145 (376)
300 1boo_A Protein (N-4 cytosine-s 50.9 18 0.00063 31.6 5.0 85 187-275 12-116 (323)
301 4e5v_A Putative THUA-like prot 50.8 46 0.0016 28.6 7.4 59 201-271 56-114 (281)
302 3p8z_A Mtase, non-structural p 48.9 21 0.00073 30.4 4.7 81 159-243 75-184 (267)
303 3lkz_A Non-structural protein 37.6 62 0.0021 28.4 6.0 50 190-243 145-202 (321)
304 1wg8_A Predicted S-adenosylmet 31.4 17 0.00057 31.7 1.4 45 152-199 15-77 (285)
305 2wk1_A NOVP; transferase, O-me 30.2 27 0.00093 30.2 2.6 74 187-273 188-266 (282)
306 3fpn_A Geobacillus stearotherm 28.3 96 0.0033 23.0 5.0 46 223-276 8-53 (119)
307 2cz4_A Hypothetical protein TT 27.4 72 0.0025 23.6 4.2 29 217-246 82-110 (119)
308 1lfp_A Hypothetical protein AQ 27.1 27 0.00092 29.7 1.9 18 257-274 147-164 (249)
309 4f3q_A Transcriptional regulat 26.9 23 0.00077 30.1 1.4 64 206-275 98-167 (247)
310 1kon_A Protein YEBC, YEBC; alp 26.5 27 0.00092 29.7 1.8 64 206-275 98-166 (249)
311 1mw7_A Hypothetical protein HP 24.1 26 0.0009 29.6 1.3 29 238-270 89-117 (240)
312 1ssz_A Pulmonary surfactant-as 23.3 37 0.0013 18.7 1.3 19 221-242 4-22 (34)
313 1lss_A TRK system potassium up 22.0 1.5E+02 0.005 21.2 5.2 63 189-272 48-117 (140)
314 1g55_A DNA cytosine methyltran 21.5 1.1E+02 0.0038 26.8 5.0 83 188-275 47-145 (343)
315 2c71_A Glycoside hydrolase, fa 21.3 1E+02 0.0035 25.0 4.4 55 215-277 128-186 (216)
316 4gbu_A NADPH dehydrogenase 1; 21.2 1.8E+02 0.0062 26.1 6.5 67 212-282 86-197 (400)
No 1
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=100.00 E-value=4e-49 Score=364.32 Aligned_cols=263 Identities=17% Similarity=0.250 Sum_probs=236.7
Q ss_pred hHHHHHHHHHhhhhHHHHHHHHHHhChhhHhhhCCCCC-----------CCChhhhhhh----------------hcccc
Q 043585 17 EGHGQITGLFLNNLSPMSLKGAVELGRADIIHSHGKPT-----------KTSNPFRFMQ----------------EDYDL 69 (287)
Q Consensus 17 ~~~~~l~~~~~g~~~~~~L~~a~~lglfd~L~~~~~~~-----------~~~~l~rlLr----------------~~y~l 69 (287)
++...|++++.||+.+++|++|++|||||+|.+++.++ +++.+.|+|| ++|++
T Consensus 7 ~~~~~L~~l~~Gf~~s~~L~aa~eLglfd~L~~~~~p~t~~eLA~~~g~~~~~l~rlLr~L~~~gll~~~~~~~~~~y~~ 86 (353)
T 4a6d_A 7 QAYRLLNDYANGFMVSQVLFAACELGVFDLLAEAPGPLDVAAVAAGVRASAHGTELLLDICVSLKLLKVETRGGKAFYRN 86 (353)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHSSSCBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEEETTEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHhcCCCCCCHHHHHHhhCcCHHHHHHHHHHHHHCCCEEEeccCccceeeC
Confidence 56778999999999999999999999999999865433 7888999998 36999
Q ss_pred chhhh-HhhcCCCCChHhhHhhcCCcchHHHHHHHHHhHhcCCCcccccccC---CChhhhhccCchHHHHHHHHHHhcc
Q 043585 70 TPIST-LLIKDKSYCLSPLVSGILDPDNIFLLHFISKLFKGNDVSVWETVRG---MKHWEIMSQNPRLSQRFNQAMVNDS 145 (287)
Q Consensus 70 t~~s~-~L~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~lr~g~~~~~~~~~g---~~~~e~~~~~~~~~~~f~~aM~~~s 145 (287)
|++++ +|.+++|.++++++.+.. +..++.|.+|.+++++|+ ++|...+| .++|+++.++|+....|+++|...+
T Consensus 87 t~~s~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~L~~~vr~g~-~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~aM~~~~ 164 (353)
T 4a6d_A 87 TELSSDYLTTVSPTSQCSMLKYMG-RTSYRCWGHLADAVREGR-NQYLETFGVPAEELFTAIYRSEGERLQFMQALQEVW 164 (353)
T ss_dssp CHHHHHHHSTTSTTCCHHHHHHHH-HTHHHHHTTHHHHHHHTS-CCHHHHHSCCCSSHHHHHTSSHHHHHHHHHHHHTTH
T ss_pred CHHHHHHhhcCCchHHHHHHHHhC-HHHHHHHHHHHHHHhcCC-ChhHHhcCCChHHHHHHHhhCHHHHHHHHHHHHHHH
Confidence 99998 788888889999998874 578899999999999998 68888887 4689999999999999999999988
Q ss_pred cchhhH-hhhcccccccCcceEEEecCcc-----------------cccchhhhhcCCC------CCCceeeeccCcc-c
Q 043585 146 EMATFI-VKDCCRTLIERLGSMVDVGGGN-----------------VLDLPHAVANTPQ------TENLKYVADDMFQ-F 200 (287)
Q Consensus 146 ~~~~~~-~~~~~~~~~~~~~~vlDvGgG~-----------------v~Dlp~vi~~a~~------~~Ri~~~~gd~~~-~ 200 (287)
....+. ++.+ ++++..+|||||||+ ++|+|+|++.+++ .+||++++||||+ +
T Consensus 165 ~~~~~~~~~~~---~~~~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dlp~v~~~a~~~~~~~~~~rv~~~~gD~~~~~ 241 (353)
T 4a6d_A 165 SVNGRSVLTAF---DLSVFPLMCDLGGGAGALAKECMSLYPGCKITVFDIPEVVWTAKQHFSFQEEEQIDFQEGDFFKDP 241 (353)
T ss_dssp HHHHHHHHHSS---CGGGCSEEEEETCTTSHHHHHHHHHCSSCEEEEEECHHHHHHHHHHSCC--CCSEEEEESCTTTSC
T ss_pred HHHHHHHHHhc---CcccCCeEEeeCCCCCHHHHHHHHhCCCceeEeccCHHHHHHHHHhhhhcccCceeeecCccccCC
Confidence 777777 8888 789999999999999 8999999988763 6899999999998 4
Q ss_pred CCCCCeEEeccccccCChHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCCC-----------------CCCCHHHHH
Q 043585 201 IPPADAYFFMLFFHAFGGEDSLKILKKCREAIAGNGQRGKVLIMDIVINEKEDE-----------------DQRTDKEWK 263 (287)
Q Consensus 201 ~p~~D~~~l~~vlh~~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~-----------------~~rt~~e~~ 263 (287)
.|++|+|++++|||+|+|++|++||++++++|+| ||+|+|+|.++++++.. ++||.+||+
T Consensus 242 ~~~~D~~~~~~vlh~~~d~~~~~iL~~~~~al~p---gg~lli~e~~~~~~~~~~~~~~~~dl~ml~~~~g~ert~~e~~ 318 (353)
T 4a6d_A 242 LPEADLYILARVLHDWADGKCSHLLERIYHTCKP---GGGILVIESLLDEDRRGPLLTQLYSLNMLVQTEGQERTPTHYH 318 (353)
T ss_dssp CCCCSEEEEESSGGGSCHHHHHHHHHHHHHHCCT---TCEEEEEECCCCTTSCCCHHHHHHHHHHHHSSSCCCCCHHHHH
T ss_pred CCCceEEEeeeecccCCHHHHHHHHHHHHhhCCC---CCEEEEEEeeeCCCCCCCHHHHHHHHHHHHhCCCcCCCHHHHH
Confidence 6679999999999999999999999999999999 99999999999876542 899999999
Q ss_pred HHHHhCCCcEEEEEecCCccceeC
Q 043585 264 TLFLDAGFTCCKITTMFGLKSLIK 287 (287)
Q Consensus 264 ~ll~~aGf~~~~~~~~~~~~s~ie 287 (287)
+||++|||+.++++++++..++|+
T Consensus 319 ~ll~~AGf~~v~v~~~~~~~~~i~ 342 (353)
T 4a6d_A 319 MLLSSAGFRDFQFKKTGAIYDAIL 342 (353)
T ss_dssp HHHHHHTCEEEEEECCSSSCEEEE
T ss_pred HHHHHCCCceEEEEEcCCceEEEE
Confidence 999999999999999988888875
No 2
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=100.00 E-value=3e-44 Score=332.97 Aligned_cols=271 Identities=24% Similarity=0.403 Sum_probs=241.4
Q ss_pred ChhhhchHHHHHHHHHhhhhHHHHHHHHHHhChhhHhhhC---CCCC-----------CCC---hhhhhhh---------
Q 043585 11 SVKELFEGHGQITGLFLNNLSPMSLKGAVELGRADIIHSH---GKPT-----------KTS---NPFRFMQ--------- 64 (287)
Q Consensus 11 ~~~~~~~~~~~l~~~~~g~~~~~~L~~a~~lglfd~L~~~---~~~~-----------~~~---~l~rlLr--------- 64 (287)
..+|..++...+++++.|++.+++|++|++|||||+|.+. +.++ +++ .|.|+||
T Consensus 13 ~~~~~~~~~~~~~~l~~~~~~~~~l~~a~~Lgifd~L~~~g~~~~t~~eLA~~~g~~~~~~~~~~l~rlLr~L~~~g~l~ 92 (364)
T 3p9c_A 13 AASADEDACMFALQLASSSVLPMTLKNAIELGLLEILVAAGGKSLTPTEVAAKLPSAANPEAPDMVDRILRLLASYNVVT 92 (364)
T ss_dssp CHHHHHHHHHHHHHHTTTTHHHHHHHHHHHHTHHHHHHHTTTCCBCHHHHHHTTTCTTCTTHHHHHHHHHHHHHHTTSEE
T ss_pred cchHHHHHHHHHHHHHHhHHHHHHHHHHHHCChHHHHhhcCCCCCCHHHHHHhcCCCCCccchhhHHHHHHHHHhCCCEE
Confidence 5667888999999999999999999999999999999984 2232 234 7999998
Q ss_pred -h-----------ccccchhhhHhhcC-CCCChHhhHhhcCCcchHHHHHHHHHhHhcCCCcccccccCCChhhhhccCc
Q 043585 65 -E-----------DYDLTPISTLLIKD-KSYCLSPLVSGILDPDNIFLLHFISKLFKGNDVSVWETVRGMKHWEIMSQNP 131 (287)
Q Consensus 65 -~-----------~y~lt~~s~~L~~~-~~~~~~~~~~~~~~~~~~~~~~~L~~~lr~g~~~~~~~~~g~~~~e~~~~~~ 131 (287)
. +|++|+.|+.|+.+ ++.++++++.+..++.++..|.+|++++|+|+ ++|+..+|.++|+|+.++|
T Consensus 93 ~~~~~~~~g~~~~~y~~t~~s~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~r~g~-~~~~~~~g~~~~~~~~~~~ 171 (364)
T 3p9c_A 93 CLVEEGKDGRLSRSYGAAPVCKFLTPNEDGVSMAALALMNQDKVLMESWYYLKDAVLDGG-IPFNKAYGMSAFEYHGTDP 171 (364)
T ss_dssp EEEEECSSSCEEEEEEECGGGGGSSCCTTSCCTHHHHHHHTSHHHHGGGGGHHHHHHHCS-CHHHHHHSSCHHHHHTTCH
T ss_pred EeccccCCCCcCCEEecCHHHHHHcCCCCCCCHHHHHHHhcCHHHHHHHhCHHHHHhhCC-ChHHHhcCCCHHHHHHhCH
Confidence 2 49999999988765 46799999888777788999999999999998 7999999999999999999
Q ss_pred hHHHHHHHHHHhcccchhhH-hhhcccccccCcceEEEecCcc-----------------cccchhhhhcCCCCCCceee
Q 043585 132 RLSQRFNQAMVNDSEMATFI-VKDCCRTLIERLGSMVDVGGGN-----------------VLDLPHAVANTPQTENLKYV 193 (287)
Q Consensus 132 ~~~~~f~~aM~~~s~~~~~~-~~~~~~~~~~~~~~vlDvGgG~-----------------v~Dlp~vi~~a~~~~Ri~~~ 193 (287)
+..+.|+++|...+....+. ++.+ + .+++..+|||||||+ ++|+|++++.+++.+||+|+
T Consensus 172 ~~~~~f~~~m~~~~~~~~~~~~~~~-~-~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~v~~~ 249 (364)
T 3p9c_A 172 RFNRVFNEGMKNHSIIITKKLLELY-H-GFEGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDLPHVISEAPQFPGVTHV 249 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHC-C-TTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHTTCCCCTTEEEE
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHhc-c-cccCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecCHHHHHhhhhcCCeEEE
Confidence 99999999999988766666 7777 3 278889999999999 79999999999988999999
Q ss_pred eccCcccCCCCCeEEeccccccCChHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCCC-------------------
Q 043585 194 ADDMFQFIPPADAYFFMLFFHAFGGEDSLKILKKCREAIAGNGQRGKVLIMDIVINEKEDE------------------- 254 (287)
Q Consensus 194 ~gd~~~~~p~~D~~~l~~vlh~~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~------------------- 254 (287)
.+|+++++|..|+|+++++||+|+|+++.++|++++++|+| ||+|+|+|.+.++....
T Consensus 250 ~~D~~~~~p~~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~p---gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~m~~~~~ 326 (364)
T 3p9c_A 250 GGDMFKEVPSGDTILMKWILHDWSDQHCATLLKNCYDALPA---HGKVVLVQCILPVNPEANPSSQGVFHVDMIMLAHNP 326 (364)
T ss_dssp ECCTTTCCCCCSEEEEESCGGGSCHHHHHHHHHHHHHHSCT---TCEEEEEECCBCSSCCSSHHHHHHHHHHHHHHHHCS
T ss_pred eCCcCCCCCCCCEEEehHHhccCCHHHHHHHHHHHHHHcCC---CCEEEEEEeccCCCCCcchhhhhHHHhHHHHHhccc
Confidence 99999988877999999999999999999999999999999 99999999998765321
Q ss_pred --CCCCHHHHHHHHHhCCCcEEEEEecCCccceeC
Q 043585 255 --DQRTDKEWKTLFLDAGFTCCKITTMFGLKSLIK 287 (287)
Q Consensus 255 --~~rt~~e~~~ll~~aGf~~~~~~~~~~~~s~ie 287 (287)
++||.+||.++|++|||+.+++.+..+..++||
T Consensus 327 ~g~~rt~~e~~~ll~~AGF~~v~~~~~~~~~~vie 361 (364)
T 3p9c_A 327 GGRERYEREFQALARGAGFTGVKSTYIYANAWAIE 361 (364)
T ss_dssp SCCCCBHHHHHHHHHHTTCCEEEEEEEETTEEEEE
T ss_pred CCccCCHHHHHHHHHHCCCceEEEEEcCCceEEEE
Confidence 789999999999999999999999999999987
No 3
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=100.00 E-value=5.1e-43 Score=325.12 Aligned_cols=271 Identities=24% Similarity=0.406 Sum_probs=237.9
Q ss_pred ChhhhchHHHHHHHHHhhhhHHHHHHHHHHhChhhHhhh--CC---CCC----------CCC---hhhhhhh--------
Q 043585 11 SVKELFEGHGQITGLFLNNLSPMSLKGAVELGRADIIHS--HG---KPT----------KTS---NPFRFMQ-------- 64 (287)
Q Consensus 11 ~~~~~~~~~~~l~~~~~g~~~~~~L~~a~~lglfd~L~~--~~---~~~----------~~~---~l~rlLr-------- 64 (287)
..+++.++...+++++.|++.+++|++|++|||||+|.+ ++ .++ ++. .|.|+||
T Consensus 14 ~~~~~~~~~~~~~~l~~~~~~~~~l~~a~~Lglfd~L~~~~gp~~~~t~~eLA~~~~~~~~~~~~~l~rlLr~L~~~gll 93 (368)
T 3reo_A 14 THSSDEEANLFAMQLASAAVLPMALKAAIELDVLEIMAKSVPPSGYISPAEIAAQLPTTNPEAPVMLDRVLRLLASYSVV 93 (368)
T ss_dssp ---CHHHHHHHHHHHHTTTHHHHHHHHHHHTTHHHHHHHHCCTTCCBCHHHHHTTSSCCCTTHHHHHHHHHHHHHHTTSE
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHCCchhHHhhcCCCCCCcCHHHHHHhcCcCCCcchhhHHHHHHHHHhCCCe
Confidence 445677889999999999999999999999999999998 32 232 233 7899998
Q ss_pred --h-----------ccccchhhhHhhc-CCCCChHhhHhhcCCcchHHHHHHHHHhHhcCCCcccccccCCChhhhhccC
Q 043585 65 --E-----------DYDLTPISTLLIK-DKSYCLSPLVSGILDPDNIFLLHFISKLFKGNDVSVWETVRGMKHWEIMSQN 130 (287)
Q Consensus 65 --~-----------~y~lt~~s~~L~~-~~~~~~~~~~~~~~~~~~~~~~~~L~~~lr~g~~~~~~~~~g~~~~e~~~~~ 130 (287)
. +|++|+.|+.|+. +++.++++++.+..++.++..|.+|++++|+|+ ++|+..+|.++|+|+.++
T Consensus 94 ~~~~~~~~~g~~~~~y~~t~~s~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~r~g~-~~~~~~~g~~~~~~~~~~ 172 (368)
T 3reo_A 94 TYTLRELPSGKVERLYGLAPVCKFLTKNEDGVSLAPFLLLATDKVLLEPWFYLKDAILEGG-IPFNKAYGMNIFDYHGTD 172 (368)
T ss_dssp EEEEEECTTSCEEEEEEECTTHHHHSCCTTSCCSHHHHHHHTCHHHHGGGGGHHHHHHHCS-CHHHHHSSSCHHHHHTTC
T ss_pred EEecccCCCCcccceeCcCHHHHHHhCCCCCCCHHHHHHHhcCHHHHhhhhchHHHHhcCC-CHHHHHhCCCHHHHHhhC
Confidence 1 4999999997765 456799999988777788899999999999998 799999999999999999
Q ss_pred chHHHHHHHHHHhcccchhhH-hhhcccccccCcceEEEecCcc-----------------cccchhhhhcCCCCCCcee
Q 043585 131 PRLSQRFNQAMVNDSEMATFI-VKDCCRTLIERLGSMVDVGGGN-----------------VLDLPHAVANTPQTENLKY 192 (287)
Q Consensus 131 ~~~~~~f~~aM~~~s~~~~~~-~~~~~~~~~~~~~~vlDvGgG~-----------------v~Dlp~vi~~a~~~~Ri~~ 192 (287)
|+..+.|+++|...+....+. ++.+ + .+++..+|||||||+ ++|+|++++.+++.+||++
T Consensus 173 ~~~~~~f~~~m~~~~~~~~~~~~~~~-~-~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~v~~ 250 (368)
T 3reo_A 173 HRINKVFNKGMSSNSTITMKKILEMY-N-GFEGLTTIVDVGGGTGAVASMIVAKYPSINAINFDLPHVIQDAPAFSGVEH 250 (368)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTC-C-TTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHTTCCCCTTEEE
T ss_pred HHHHHHHHHHHHhhhhhHHHHHHHhc-c-cccCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEehHHHHHhhhhcCCCEE
Confidence 999999999999988766666 7777 3 278889999999999 7999999999998899999
Q ss_pred eeccCcccCCCCCeEEeccccccCChHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCCC------------------
Q 043585 193 VADDMFQFIPPADAYFFMLFFHAFGGEDSLKILKKCREAIAGNGQRGKVLIMDIVINEKEDE------------------ 254 (287)
Q Consensus 193 ~~gd~~~~~p~~D~~~l~~vlh~~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~------------------ 254 (287)
+.+|+++++|..|+|+++++||+|+++++.++|++++++|+| ||+|+|+|.+.++....
T Consensus 251 ~~~d~~~~~p~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~p---gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~ 327 (368)
T 3reo_A 251 LGGDMFDGVPKGDAIFIKWICHDWSDEHCLKLLKNCYAALPD---HGKVIVAEYILPPSPDPSIATKVVIHTDALMLAYN 327 (368)
T ss_dssp EECCTTTCCCCCSEEEEESCGGGBCHHHHHHHHHHHHHHSCT---TCEEEEEECCCCSSCCCCHHHHHHHHHHHHHHHHS
T ss_pred EecCCCCCCCCCCEEEEechhhcCCHHHHHHHHHHHHHHcCC---CCEEEEEEeccCCCCCCchhhhHHHhhhHHHHhhc
Confidence 999999988877999999999999999999999999999999 99999999998765421
Q ss_pred ---CCCCHHHHHHHHHhCCCcEEEEEecCCccceeC
Q 043585 255 ---DQRTDKEWKTLFLDAGFTCCKITTMFGLKSLIK 287 (287)
Q Consensus 255 ---~~rt~~e~~~ll~~aGf~~~~~~~~~~~~s~ie 287 (287)
++||.+||+++|++|||+.+++.+..+..++||
T Consensus 328 ~~g~~rt~~e~~~ll~~AGF~~v~~~~~~~~~~vie 363 (368)
T 3reo_A 328 PGGKERTEKEFQALAMASGFRGFKVASCAFNTYVME 363 (368)
T ss_dssp SBCCCCCHHHHHHHHHHTTCCEEEEEEEETTEEEEE
T ss_pred CCCccCCHHHHHHHHHHCCCeeeEEEEeCCCcEEEE
Confidence 789999999999999999999999988888886
No 4
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=100.00 E-value=5.4e-43 Score=322.36 Aligned_cols=266 Identities=21% Similarity=0.309 Sum_probs=238.2
Q ss_pred hchHHHHHHHHHhhhhHHHHHHHHHHhChhhHhhhCCCCC---------CCChhhhhhh------------hccccchhh
Q 043585 15 LFEGHGQITGLFLNNLSPMSLKGAVELGRADIIHSHGKPT---------KTSNPFRFMQ------------EDYDLTPIS 73 (287)
Q Consensus 15 ~~~~~~~l~~~~~g~~~~~~L~~a~~lglfd~L~~~~~~~---------~~~~l~rlLr------------~~y~lt~~s 73 (287)
..++...|++++.|++.+++|++|++|||||+|.+++.++ +++.+.|+|| ++|++|+.|
T Consensus 19 ~~~~~~~l~~~~~~~~~~~~l~~a~~lglf~~l~~g~~t~~elA~~~g~~~~~l~rlLr~l~~~g~l~~~~~~y~~t~~s 98 (348)
T 3lst_A 19 RLQSALALYEEAMGYTYAAALRAAAAVGVADHLVDGPRTPAELAAATGTDADALRRVLRLLAVRDVVRESDGRFALTDKG 98 (348)
T ss_dssp HHHHHHHHHHHHTTHHHHHHHHHHHHHTGGGGGTTSCBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEETTEEEECTTT
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHcCchhHhhCCCCCHHHHHHHhCcCHHHHHHHHHHHHhCCCEEecCCEEecCHHH
Confidence 3467889999999999999999999999999999765444 8889999998 789999999
Q ss_pred hHhhcCCCCChHhhHhhcCCcchHHHHHHHHHhHhcCCCcccccccCCChhhhhccCchHHHHHHHHHHhcccchhhH-h
Q 043585 74 TLLIKDKSYCLSPLVSGILDPDNIFLLHFISKLFKGNDVSVWETVRGMKHWEIMSQNPRLSQRFNQAMVNDSEMATFI-V 152 (287)
Q Consensus 74 ~~L~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~lr~g~~~~~~~~~g~~~~e~~~~~~~~~~~f~~aM~~~s~~~~~~-~ 152 (287)
+.|.++++.++++++.++.++..+..|.+|++++|+|+ ++|+..+|.++|+|+.++|+..+.|+++|...+....+. +
T Consensus 99 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~g~-~~~~~~~g~~~~~~~~~~~~~~~~f~~~m~~~~~~~~~~~~ 177 (348)
T 3lst_A 99 AALRSDSPVPARAGILMFTDTMFWTMSHRVASALGPER-PAFADIFGSSLDAYFDGDAEVEALYYEGMETVSAAEHLILA 177 (348)
T ss_dssp GGGSTTSSSCSHHHHHHHTSHHHHHHHHTHHHHTCTTC-CCHHHHHSSCHHHHHTTCHHHHHHHHHHHHHHHHTTHHHHH
T ss_pred HHHhcCCCccHHHHHHHhcCHHHHHHHHHHHHHHhcCC-ChhhHHhCCCHHHHHHhCHHHHHHHHHHHHHhhhhhHHHHH
Confidence 98888888889999888766668899999999999997 689989998999999999999999999999988777677 7
Q ss_pred hhcccccccCcceEEEecCcc-----------------cccchhhhhcCCC-----CCCceeeeccCcccCCCCCeEEec
Q 043585 153 KDCCRTLIERLGSMVDVGGGN-----------------VLDLPHAVANTPQ-----TENLKYVADDMFQFIPPADAYFFM 210 (287)
Q Consensus 153 ~~~~~~~~~~~~~vlDvGgG~-----------------v~Dlp~vi~~a~~-----~~Ri~~~~gd~~~~~p~~D~~~l~ 210 (287)
+.+ ++++..+|||||||+ ++|+|+++...+. .+||+++.+|+++++|+||+|+++
T Consensus 178 ~~~---~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~p~~D~v~~~ 254 (348)
T 3lst_A 178 RAG---DFPATGTVADVGGGRGGFLLTVLREHPGLQGVLLDRAEVVARHRLDAPDVAGRWKVVEGDFLREVPHADVHVLK 254 (348)
T ss_dssp HHS---CCCSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEECHHHHTTCCCCCGGGTTSEEEEECCTTTCCCCCSEEEEE
T ss_pred HhC---CccCCceEEEECCccCHHHHHHHHHCCCCEEEEecCHHHhhcccccccCCCCCeEEEecCCCCCCCCCcEEEEe
Confidence 888 678889999999999 7899988873321 578999999999888899999999
Q ss_pred cccccCChHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCCC----------------CCCCHHHHHHHHHhCCCcEE
Q 043585 211 LFFHAFGGEDSLKILKKCREAIAGNGQRGKVLIMDIVINEKEDE----------------DQRTDKEWKTLFLDAGFTCC 274 (287)
Q Consensus 211 ~vlh~~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~----------------~~rt~~e~~~ll~~aGf~~~ 274 (287)
++||+|+|+++.++|++++++|+| ||+|+|+|.+.++...+ ++||.+||.++|++|||+++
T Consensus 255 ~vlh~~~d~~~~~~L~~~~~~Lkp---gG~l~i~e~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~ 331 (348)
T 3lst_A 255 RILHNWGDEDSVRILTNCRRVMPA---HGRVLVIDAVVPEGNDAHQSKEMDFMMLAARTGQERTAAELEPLFTAAGLRLD 331 (348)
T ss_dssp SCGGGSCHHHHHHHHHHHHHTCCT---TCEEEEEECCBCSSSSCCHHHHHHHHHHHTTSCCCCBHHHHHHHHHHTTEEEE
T ss_pred hhccCCCHHHHHHHHHHHHHhcCC---CCEEEEEEeccCCCCCcchhhhcChhhhhcCCCcCCCHHHHHHHHHHCCCceE
Confidence 999999999999999999999999 99999999998776432 67999999999999999999
Q ss_pred EEEecCCccceeC
Q 043585 275 KITTMFGLKSLIK 287 (287)
Q Consensus 275 ~~~~~~~~~s~ie 287 (287)
++++..+..++||
T Consensus 332 ~~~~~~~~~~vie 344 (348)
T 3lst_A 332 RVVGTSSVMSIAV 344 (348)
T ss_dssp EEEECSSSCEEEE
T ss_pred EEEECCCCcEEEE
Confidence 9999777888886
No 5
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=100.00 E-value=1.3e-42 Score=317.50 Aligned_cols=262 Identities=21% Similarity=0.301 Sum_probs=231.0
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHhChhhHhhhCCCCC---------CCChhhhhhh-------------hccccchhhhH
Q 043585 18 GHGQITGLFLNNLSPMSLKGAVELGRADIIHSHGKPT---------KTSNPFRFMQ-------------EDYDLTPISTL 75 (287)
Q Consensus 18 ~~~~l~~~~~g~~~~~~L~~a~~lglfd~L~~~~~~~---------~~~~l~rlLr-------------~~y~lt~~s~~ 75 (287)
++..+++++.|++.+++|++|++|||||+|.+++.++ +++.+.|+|| ++|.+|+.|+.
T Consensus 5 ~~~~l~~~~~g~~~~~~l~~a~~lglf~~l~~g~~t~~elA~~~~~~~~~l~rlLr~l~~~gl~~~~~~~~y~~t~~s~~ 84 (332)
T 3i53_A 5 AAHIGLRALADLATPMAVRVAATLRVADHIAAGHRTAAEIASAAGAHADSLDRLLRHLVAVGLFTRDGQGVYGLTEFGEQ 84 (332)
T ss_dssp CCSSCHHHHTCCHHHHHHHHHHHHTHHHHHHTTCCBHHHHHHHHTCCHHHHHHHHHHHHHTTSEEECTTSBEEECTTGGG
T ss_pred cHHHHHHHHHhhHHHHHHHHHHHcChHHHHhcCCCCHHHHHHHHCcCHHHHHHHHHHHHhCCcEEecCCCeEEcCHhHHH
Confidence 3456899999999999999999999999999765443 8889999998 78999999998
Q ss_pred hhcCCCCChHhhHhhcCCcchH-HHHHHHHHhHhcCCCcccccccCCChhhhhccCchHHHHHHHHHHhcccchhhH-hh
Q 043585 76 LIKDKSYCLSPLVSGILDPDNI-FLLHFISKLFKGNDVSVWETVRGMKHWEIMSQNPRLSQRFNQAMVNDSEMATFI-VK 153 (287)
Q Consensus 76 L~~~~~~~~~~~~~~~~~~~~~-~~~~~L~~~lr~g~~~~~~~~~g~~~~e~~~~~~~~~~~f~~aM~~~s~~~~~~-~~ 153 (287)
|.++++.++++++.+..++..+ ..|.+|++++++|+ ++|+..+|.++|+++.++|+..+.|+++|...+....+. ++
T Consensus 85 l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-~~~~~~~g~~~~~~~~~~~~~~~~f~~~m~~~~~~~~~~~~~ 163 (332)
T 3i53_A 85 LRDDHAAGKRKWLDMNSAVGRGDLGFVELAHSIRTGQ-PAYPVRYGTSFWEDLGSDPVLSASFDTLMSHHLELDYTGIAA 163 (332)
T ss_dssp GSTTCTTCCHHHHCTTSHHHHHGGGGGGHHHHHHHSS-CSHHHHHSSCHHHHHHHCHHHHHHHHHHHHHHHHHHHTTGGG
T ss_pred HhcCCchhHHHHHHHcCCHhHHHHHHHHhHHHHhcCC-CHHHHhhCCCHHHHHHhCHHHHHHHHHHHHHhHHhhHHHHHH
Confidence 8888877899998887544456 78999999999998 689888998999999999999999999999987766666 77
Q ss_pred hcccccccCcceEEEecCcc-----------------cccchhhhhcCCC-------CCCceeeeccCcccCC-CCCeEE
Q 043585 154 DCCRTLIERLGSMVDVGGGN-----------------VLDLPHAVANTPQ-------TENLKYVADDMFQFIP-PADAYF 208 (287)
Q Consensus 154 ~~~~~~~~~~~~vlDvGgG~-----------------v~Dlp~vi~~a~~-------~~Ri~~~~gd~~~~~p-~~D~~~ 208 (287)
.+ ++++..+|||||||+ ++|+|++++.+++ .+||+|+.+|+++++| +||+|+
T Consensus 164 ~~---~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~p~~~D~v~ 240 (332)
T 3i53_A 164 KY---DWAALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDLQGPASAAHRRFLDTGLSGRAQVVVGSFFDPLPAGAGGYV 240 (332)
T ss_dssp SS---CCGGGSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCSCSEEE
T ss_pred hC---CCCCCCEEEEeCCChhHHHHHHHHHCCCCeEEEecCHHHHHHHHHhhhhcCcCcCeEEecCCCCCCCCCCCcEEE
Confidence 77 577889999999999 7899999988864 4899999999998888 699999
Q ss_pred eccccccCChHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCCC-------------CCCCHHHHHHHHHhCCCcEEE
Q 043585 209 FMLFFHAFGGEDSLKILKKCREAIAGNGQRGKVLIMDIVINEKEDE-------------DQRTDKEWKTLFLDAGFTCCK 275 (287)
Q Consensus 209 l~~vlh~~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~-------------~~rt~~e~~~ll~~aGf~~~~ 275 (287)
++++||+|+|+++.++|++++++|+| ||+|+|+|.+.++.... ++||.+||.++|++|||++++
T Consensus 241 ~~~vlh~~~~~~~~~~l~~~~~~L~p---gG~l~i~e~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~ 317 (332)
T 3i53_A 241 LSAVLHDWDDLSAVAILRRCAEAAGS---GGVVLVIEAVAGDEHAGTGMDLRMLTYFGGKERSLAELGELAAQAGLAVRA 317 (332)
T ss_dssp EESCGGGSCHHHHHHHHHHHHHHHTT---TCEEEEEECCCC---CCHHHHHHHHHHHSCCCCCHHHHHHHHHHTTEEEEE
T ss_pred EehhhccCCHHHHHHHHHHHHHhcCC---CCEEEEEeecCCCCCccHHHHHHHHhhCCCCCCCHHHHHHHHHHCCCEEEE
Confidence 99999999999999999999999999 99999999988775211 789999999999999999999
Q ss_pred EEecCCccceeC
Q 043585 276 ITTMFGLKSLIK 287 (287)
Q Consensus 276 ~~~~~~~~s~ie 287 (287)
+++.++ .+|||
T Consensus 318 ~~~~~~-~~vie 328 (332)
T 3i53_A 318 AHPISY-VSIVE 328 (332)
T ss_dssp EEECSS-SEEEE
T ss_pred EEECCC-cEEEE
Confidence 999988 89886
No 6
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=100.00 E-value=5.1e-42 Score=318.38 Aligned_cols=265 Identities=18% Similarity=0.363 Sum_probs=238.1
Q ss_pred chHHHHHHHHHhhhhHHHHHHHHHHhChhhHhhhCCCCC---------CCChhhhhhh-------------hc-cccchh
Q 043585 16 FEGHGQITGLFLNNLSPMSLKGAVELGRADIIHSHGKPT---------KTSNPFRFMQ-------------ED-YDLTPI 72 (287)
Q Consensus 16 ~~~~~~l~~~~~g~~~~~~L~~a~~lglfd~L~~~~~~~---------~~~~l~rlLr-------------~~-y~lt~~ 72 (287)
.+...+|++++.|++.+++|++|++|||||+|++++.++ +++.+.|+|| ++ |++|+.
T Consensus 36 ~~~~~~l~~l~~~~~~~~~l~~a~~lglf~~l~~g~~t~~eLA~~~g~~~~~l~rlLr~L~~~g~l~~~~~~~~y~~t~~ 115 (369)
T 3gwz_A 36 AAAEETVNDILQGAWKARAIHVAVELGVPELLQEGPRTATALAEATGAHEQTLRRLLRLLATVGVFDDLGHDDLFAQNAL 115 (369)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTGGGGTTSCEEHHHHHHHHTCCHHHHHHHHHHHHHTTSSEECSSTTEEECCHH
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHCChhhhhcCCCCCHHHHHHHHCcCHHHHHHHHHHHHhCCCEEEeCCCceEecCHH
Confidence 456788999999999999999999999999999755443 8889999998 67 999999
Q ss_pred hhHhhcCCCCChHhhHhhcCCcchHHHHHHHHHhHhcCCCcccccccCCChhhhhccCchHHHHHHHHHHhcccchhhH-
Q 043585 73 STLLIKDKSYCLSPLVSGILDPDNIFLLHFISKLFKGNDVSVWETVRGMKHWEIMSQNPRLSQRFNQAMVNDSEMATFI- 151 (287)
Q Consensus 73 s~~L~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~lr~g~~~~~~~~~g~~~~e~~~~~~~~~~~f~~aM~~~s~~~~~~- 151 (287)
++.|.++++.++++++.++.++..+..|.+|.+++++|+ ++|...+|.++|+|+.++|+..+.|+++|...+....+.
T Consensus 116 s~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~g~-~~~~~~~g~~~~~~~~~~~~~~~~f~~~m~~~~~~~~~~l 194 (369)
T 3gwz_A 116 SAVLLPDPASPVATDARFQAAPWHWRAWEQLTHSVRTGE-ASFDVANGTSFWQLTHEDPKARELFNRAMGSVSLTEAGQV 194 (369)
T ss_dssp HHTTSCCTTCHHHHHHHHHHSHHHHHHHHTHHHHHHHSS-CSHHHHHSSCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhcCCchhHHHHHHHcCCHHHHHHHHhHHHHHhCCC-ChhHhhcCCCHHHHHHhCHHHHHHHHHHHHHHHhhhHHHH
Confidence 999888888889999988766667899999999999998 789888998999999999999999999999988766666
Q ss_pred hhhcccccccCcceEEEecCcc-----------------cccchhhhhcCCC-------CCCceeeeccCcccCC-CCCe
Q 043585 152 VKDCCRTLIERLGSMVDVGGGN-----------------VLDLPHAVANTPQ-------TENLKYVADDMFQFIP-PADA 206 (287)
Q Consensus 152 ~~~~~~~~~~~~~~vlDvGgG~-----------------v~Dlp~vi~~a~~-------~~Ri~~~~gd~~~~~p-~~D~ 206 (287)
++.+ ++.+..+|||||||+ ++|+|.+++.+++ .+||+++.+|+++++| +||+
T Consensus 195 ~~~~---~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~p~~~D~ 271 (369)
T 3gwz_A 195 AAAY---DFSGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLERPPVAEEARELLTGRGLADRCEILPGDFFETIPDGADV 271 (369)
T ss_dssp HHHS---CCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHHHHHHHHHHTTCTTTEEEEECCTTTCCCSSCSE
T ss_pred HHhC---CCccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcCHHHHHHHHHhhhhcCcCCceEEeccCCCCCCCCCceE
Confidence 7778 678889999999999 7899999988874 5799999999998888 6999
Q ss_pred EEeccccccCChHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCCC---------------CCCCHHHHHHHHHhCCC
Q 043585 207 YFFMLFFHAFGGEDSLKILKKCREAIAGNGQRGKVLIMDIVINEKEDE---------------DQRTDKEWKTLFLDAGF 271 (287)
Q Consensus 207 ~~l~~vlh~~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~---------------~~rt~~e~~~ll~~aGf 271 (287)
|+++++||+|+|+++.++|++++++|+| ||+|+|+|.+.++...+ ++||.+||+++|++|||
T Consensus 272 v~~~~vlh~~~d~~~~~~L~~~~~~L~p---gG~l~i~e~~~~~~~~~~~~~~d~~~~~~~~g~~~t~~e~~~ll~~aGf 348 (369)
T 3gwz_A 272 YLIKHVLHDWDDDDVVRILRRIATAMKP---DSRLLVIDNLIDERPAASTLFVDLLLLVLVGGAERSESEFAALLEKSGL 348 (369)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHTTCCT---TCEEEEEEEBCCSSCCHHHHHHHHHHHHHHSCCCBCHHHHHHHHHTTTE
T ss_pred EEhhhhhccCCHHHHHHHHHHHHHHcCC---CCEEEEEEeccCCCCCCchhHhhHHHHhhcCCccCCHHHHHHHHHHCCC
Confidence 9999999999999999999999999999 99999999998875421 78999999999999999
Q ss_pred cEEEEEe-cCCccceeC
Q 043585 272 TCCKITT-MFGLKSLIK 287 (287)
Q Consensus 272 ~~~~~~~-~~~~~s~ie 287 (287)
+++++++ ..+..++||
T Consensus 349 ~~~~~~~~~~~~~svie 365 (369)
T 3gwz_A 349 RVERSLPCGAGPVRIVE 365 (369)
T ss_dssp EEEEEEECSSSSEEEEE
T ss_pred eEEEEEECCCCCcEEEE
Confidence 9999999 578889986
No 7
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=100.00 E-value=3e-41 Score=311.75 Aligned_cols=274 Identities=41% Similarity=0.683 Sum_probs=239.0
Q ss_pred hhhhchHHHHHHHHHhhhhHHHHHHHHHHhChhhHhhhCC--CCC---------C---CChhhhhhh----------h--
Q 043585 12 VKELFEGHGQITGLFLNNLSPMSLKGAVELGRADIIHSHG--KPT---------K---TSNPFRFMQ----------E-- 65 (287)
Q Consensus 12 ~~~~~~~~~~l~~~~~g~~~~~~L~~a~~lglfd~L~~~~--~~~---------~---~~~l~rlLr----------~-- 65 (287)
.+++.++...|++++.|++.+++|++|++|||||+|++++ .++ + ++.+.|+|| .
T Consensus 4 ~~~~~~~~~~l~~~~~~~~~~~~l~~a~~lgif~~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~gll~~~~~ 83 (358)
T 1zg3_A 4 ESELYHAQIHLYKHVYNFVSSMALKSAMELGIADAIHNHGKPMTLSELASSLKLHPSKVNILHRFLRLLTHNGFFAKTIV 83 (358)
T ss_dssp TSCCTTHHHHHHHHHTTHHHHHHHHHHHHHTHHHHHHHHTSCEEHHHHHHHTTCCTTTHHHHHHHHHHHHHTTSEEEEEE
T ss_pred hHHhhhHHHHHHHHHHHHHHHHHHHHHHHCChHhHHhhcCCCcCHHHHHHhcCCCCcchHHHHHHHHHHhhCCcEEEecc
Confidence 3678889999999999999999999999999999999752 232 2 557889988 4
Q ss_pred -----------ccccchhhhHhhcCCCCChHhhHhhcCCcchHHHHHHHHHhHhcCC-CcccccccCCChhhhhccCchH
Q 043585 66 -----------DYDLTPISTLLIKDKSYCLSPLVSGILDPDNIFLLHFISKLFKGND-VSVWETVRGMKHWEIMSQNPRL 133 (287)
Q Consensus 66 -----------~y~lt~~s~~L~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~lr~g~-~~~~~~~~g~~~~e~~~~~~~~ 133 (287)
+|++|+.|++|++++|.++++++.+..++.++..|.+|++++|+|+ .++|+.++|.++|+++.++|+.
T Consensus 84 ~~~~~~g~~~~~y~~t~~s~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~l~~g~~~~~~~~~~g~~~~~~~~~~p~~ 163 (358)
T 1zg3_A 84 KGKEGDEEEEIAYSLTPPSKLLISGKPTCLSSIVKGALHPSSLDMWSSSKKWFNEDKEQTLFECATGESFWDFLNKDSES 163 (358)
T ss_dssp CCSSSSCCCEEEEEECHHHHTTCTTSTTCCHHHHHHHTSHHHHGGGGGHHHHHHCSCCCCHHHHHHSSCHHHHHTSGGGH
T ss_pred cccccCCCCCCEEeCCHHHHHHhCCCCccHHHHHHHhcCcHHHHHHHHHHHHHhCCCCCChHHHHhCCCHHHHHhcChhh
Confidence 4999999999988888899999988776778899999999999983 2789888999999999999999
Q ss_pred HH--HHHHHHHhcccchhhH-hhhcccccccCcceEEEecCcc-----------------cccchhhhhcCCCCCCceee
Q 043585 134 SQ--RFNQAMVNDSEMATFI-VKDCCRTLIERLGSMVDVGGGN-----------------VLDLPHAVANTPQTENLKYV 193 (287)
Q Consensus 134 ~~--~f~~aM~~~s~~~~~~-~~~~~~~~~~~~~~vlDvGgG~-----------------v~Dlp~vi~~a~~~~Ri~~~ 193 (287)
.+ .|+++|...+.... . ++.+ ++++.+..+|||||||+ ++|+|.+++.+++.++|+++
T Consensus 164 ~~~~~f~~~m~~~~~~~~-~~~~~~-~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~v~~~ 241 (358)
T 1zg3_A 164 STLSMFQDAMASDSRMFK-LVLQEN-KRVFEGLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQPQVVGNLTGNENLNFV 241 (358)
T ss_dssp HHHHHHHHHHHHHHHTHH-HHHHHT-HHHHHTCSEEEEETCTTSHHHHHHHHHCTTSEEEEEECHHHHSSCCCCSSEEEE
T ss_pred hhHHHHHHHHhcccHHHH-HHHHhc-chhccCCCEEEEECCCcCHHHHHHHHHCCCCeEEEeccHHHHhhcccCCCcEEE
Confidence 99 99999998876555 5 7767 54577889999999999 67999999999887779999
Q ss_pred eccCcccCCCCCeEEeccccccCChHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCC--------------------
Q 043585 194 ADDMFQFIPPADAYFFMLFFHAFGGEDSLKILKKCREAIAGNGQRGKVLIMDIVINEKED-------------------- 253 (287)
Q Consensus 194 ~gd~~~~~p~~D~~~l~~vlh~~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~-------------------- 253 (287)
.+|+++++|.+|+|+++++||+|+|+++.++|++++++|+|+++||+|+|+|.+.++...
T Consensus 242 ~~d~~~~~~~~D~v~~~~vlh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 321 (358)
T 1zg3_A 242 GGDMFKSIPSADAVLLKWVLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDISIDETSDDRGLTELQLDYDLVMLTMFL 321 (358)
T ss_dssp ECCTTTCCCCCSEEEEESCGGGSCHHHHHHHHHHHHHHTGGGGGGCEEEEEECEECTTCSCHHHHHHHHHHHHHHHHHHS
T ss_pred eCccCCCCCCceEEEEcccccCCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeccCCCCccchhhhHHHhhCHHHhccCC
Confidence 999999888899999999999999999999999999999983226999999999876542
Q ss_pred CCCCCHHHHHHHHHhCCCcEEEEEecCCccceeC
Q 043585 254 EDQRTDKEWKTLFLDAGFTCCKITTMFGLKSLIK 287 (287)
Q Consensus 254 ~~~rt~~e~~~ll~~aGf~~~~~~~~~~~~s~ie 287 (287)
.++||.+||.++|+++||+.+++++.++..++||
T Consensus 322 g~~~t~~e~~~ll~~aGf~~~~~~~~~~~~~vie 355 (358)
T 1zg3_A 322 GKERTKQEWEKLIYDAGFSSYKITPISGFKSLIE 355 (358)
T ss_dssp CCCEEHHHHHHHHHHTTCCEEEEEEETTTEEEEE
T ss_pred CCCCCHHHHHHHHHHcCCCeeEEEecCCCcEEEE
Confidence 1678999999999999999999999888889987
No 8
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=100.00 E-value=5.5e-41 Score=309.32 Aligned_cols=276 Identities=38% Similarity=0.681 Sum_probs=239.3
Q ss_pred CChhhhchHHHHHHHHHhhhhHHHHHHHHHHhChhhHhhhCC--CCC---------C---CChhhhhhh-----------
Q 043585 10 VSVKELFEGHGQITGLFLNNLSPMSLKGAVELGRADIIHSHG--KPT---------K---TSNPFRFMQ----------- 64 (287)
Q Consensus 10 ~~~~~~~~~~~~l~~~~~g~~~~~~L~~a~~lglfd~L~~~~--~~~---------~---~~~l~rlLr----------- 64 (287)
.+.+++.++...+++++.|++.+++|++|++||||++|++++ .++ + ++.+.|+||
T Consensus 8 ~~~~~~~~a~~~l~~~~~~~~~~~~l~~a~~lgif~~L~~~~~~~t~~ela~~~~~~~~~~~~l~rlLr~L~~~gll~~~ 87 (352)
T 1fp2_A 8 RKPSEIFKAQALLYKHIYAFIDSMSLKWAVEMNIPNIIQNHGKPISLSNLVSILQVPSSKIGNVRRLMRYLAHNGFFEII 87 (352)
T ss_dssp CCSTHHHHHHHHHHHHHTTHHHHHHHHHHHHTTHHHHHHHHTSCEEHHHHHHHHTCCGGGHHHHHHHHHHHHHTTSEEEE
T ss_pred CChHHHhhHHHHHHHHHHHHHHHHHHHHHHHCChhhhhhhcCCCccHHHHHHHhCcCCCChHHHHHHHHHHHhCCeEEEe
Confidence 345788999999999999999999999999999999999742 232 2 557889988
Q ss_pred ----hccccchhhhHhhcCCCCChHhhHhhcCCcchHHHHHHHHHhHh-cCCCcccccccCCChhhhhccCchHHHHHHH
Q 043585 65 ----EDYDLTPISTLLIKDKSYCLSPLVSGILDPDNIFLLHFISKLFK-GNDVSVWETVRGMKHWEIMSQNPRLSQRFNQ 139 (287)
Q Consensus 65 ----~~y~lt~~s~~L~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~lr-~g~~~~~~~~~g~~~~e~~~~~~~~~~~f~~ 139 (287)
++|++|+.|++|++++|.++++++.+..++.++..|.+|++++| +|+ ++|+.++|.++|+++.++|+..+.|++
T Consensus 88 ~~~~~~y~~t~~s~~L~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~l~~~g~-~~~~~~~g~~~~~~~~~~~~~~~~f~~ 166 (352)
T 1fp2_A 88 TKEEESYALTVASELLVRGSDLCLAPMVECVLDPTLSGSYHELKKWIYEEDL-TLFGVTLGSGFWDFLDKNPEYNTSFND 166 (352)
T ss_dssp ESSSEEEEECHHHHTTSTTSSSCCHHHHHHHTCHHHHHGGGGHHHHHTCSSC-CHHHHHHSSCHHHHHHHCHHHHHHHHH
T ss_pred cCCCCeEeCCHHHHHHhCCCCccHHHHHHHhcCchHHHHHHHHHHHHHhcCC-ChHHHHcCCCHHHHHHhChHHHHHHHH
Confidence 25999999999998888889999988766778899999999999 776 789988999999999999999999999
Q ss_pred HHHhcccchhhHhhhcccccccCcceEEEecCcc-----------------cccchhhhhcCCCCCCceeeeccCcccCC
Q 043585 140 AMVNDSEMATFIVKDCCRTLIERLGSMVDVGGGN-----------------VLDLPHAVANTPQTENLKYVADDMFQFIP 202 (287)
Q Consensus 140 aM~~~s~~~~~~~~~~~~~~~~~~~~vlDvGgG~-----------------v~Dlp~vi~~a~~~~Ri~~~~gd~~~~~p 202 (287)
+|...+....+.++.+ ++++++..+|||||||+ ++|+|.+++.+++.++|+++.+|+++++|
T Consensus 167 ~m~~~~~~~~~~~~~~-~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~v~~~~~d~~~~~p 245 (352)
T 1fp2_A 167 AMASDSKLINLALRDC-DFVFDGLESIVDVGGGTGTTAKIICETFPKLKCIVFDRPQVVENLSGSNNLTYVGGDMFTSIP 245 (352)
T ss_dssp HHHHTHHHHHHHHHTC-HHHHTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHTTCCCBTTEEEEECCTTTCCC
T ss_pred HHHhcchhhhhHHHhc-ccccccCceEEEeCCCccHHHHHHHHHCCCCeEEEeeCHHHHhhcccCCCcEEEeccccCCCC
Confidence 9999876543335555 44577889999999999 78999999999887779999999999888
Q ss_pred CCCeEEeccccccCChHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCC-------------------CCCCCHHHHH
Q 043585 203 PADAYFFMLFFHAFGGEDSLKILKKCREAIAGNGQRGKVLIMDIVINEKED-------------------EDQRTDKEWK 263 (287)
Q Consensus 203 ~~D~~~l~~vlh~~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~-------------------~~~rt~~e~~ 263 (287)
.+|+|+++++||+|+|+++.++|++++++|+|+++||+|+|+|.+.++... .++||.+||.
T Consensus 246 ~~D~v~~~~~lh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~t~~e~~ 325 (352)
T 1fp2_A 246 NADAVLLKYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVIDKKKDENQVTQIKLLMDVNMACLNGKERNEEEWK 325 (352)
T ss_dssp CCSEEEEESCGGGSCHHHHHHHHHHHHHHHSGGGCCCEEEEEECEECTTTSCHHHHHHHHHHHHHGGGGTCCCEEHHHHH
T ss_pred CccEEEeehhhccCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeecCCCCCccchhhhHhhccHHHHhccCCCCCHHHHH
Confidence 899999999999999999999999999999983336999999998876542 1568999999
Q ss_pred HHHHhCCCcEEEEEecCCccceeC
Q 043585 264 TLFLDAGFTCCKITTMFGLKSLIK 287 (287)
Q Consensus 264 ~ll~~aGf~~~~~~~~~~~~s~ie 287 (287)
++|+++||+.+++++.++..+|||
T Consensus 326 ~ll~~aGf~~~~~~~~~~~~~vie 349 (352)
T 1fp2_A 326 KLFIEAGFQHYKISPLTGFLSLIE 349 (352)
T ss_dssp HHHHHTTCCEEEEEEEETTEEEEE
T ss_pred HHHHHCCCCeeEEEecCCCcEEEE
Confidence 999999999999999888889987
No 9
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=100.00 E-value=1.9e-40 Score=303.06 Aligned_cols=260 Identities=25% Similarity=0.333 Sum_probs=230.9
Q ss_pred hHHHHHHHHHhhhhHHHHHHHHHHhChhhHhhhCCCCC---------CCChhhhhhh-------------hccccchhhh
Q 043585 17 EGHGQITGLFLNNLSPMSLKGAVELGRADIIHSHGKPT---------KTSNPFRFMQ-------------EDYDLTPIST 74 (287)
Q Consensus 17 ~~~~~l~~~~~g~~~~~~L~~a~~lglfd~L~~~~~~~---------~~~~l~rlLr-------------~~y~lt~~s~ 74 (287)
.++..+++++.|++.+++|++|++||||++|.+++.++ +++.+.|+|| +.|++|+.|+
T Consensus 7 ~~~~~l~~~~~~~~~~~~l~~~~~lgi~~~l~~~~~t~~ela~~~~~~~~~l~r~Lr~L~~~g~l~~~~~~~y~~t~~s~ 86 (334)
T 2ip2_A 7 AAARNLIQVVTGEWKSRCVYVATRLGLADLIESGIDSDETLAAAVGSDAERIHRLMRLLVAFEIFQGDTRDGYANTPTSH 86 (334)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHTTCCSHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEETTTEEEECHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHcCcHHHHhCCCCCHHHHHHHhCcCHHHHHHHHHHHHhCCceEecCCCeEecCHHHH
Confidence 57789999999999999999999999999998765554 8889999998 5899999999
Q ss_pred HhhcCCCCChHhhHhhcCCcchHHHHHHHHHhHhcCCCcccccccCCChhhhhccCchHHHHHHHHHHhcccchhhH-hh
Q 043585 75 LLIKDKSYCLSPLVSGILDPDNIFLLHFISKLFKGNDVSVWETVRGMKHWEIMSQNPRLSQRFNQAMVNDSEMATFI-VK 153 (287)
Q Consensus 75 ~L~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~lr~g~~~~~~~~~g~~~~e~~~~~~~~~~~f~~aM~~~s~~~~~~-~~ 153 (287)
.|+ ++|.++++++.+..++.. ..|.+|++++++|+ ++|+..+|.++|+++.++|+..+.|+++| ..+....+. ++
T Consensus 87 ~l~-~~~~~~~~~~~~~~~~~~-~~~~~l~~~l~~~~-~~~~~~~g~~~~~~~~~~~~~~~~f~~~m-~~~~~~~~~~~~ 162 (334)
T 2ip2_A 87 LLR-DVEGSFRDMVLFYGEEFH-AAWTPACEALLSGT-PGFELAFGEDFYSYLKRCPDAGRRFLLAM-KASNLAFHEIPR 162 (334)
T ss_dssp TTS-SSTTCSHHHHHHHTTHHH-HHTTTHHHHHHHCC-CHHHHHHSSCHHHHHHHCHHHHHHHHHHH-GGGHHHHHHHHH
T ss_pred HHh-CCCccHHHHHHHhcCchh-hHHHHHHHHHhcCC-ChhhhhcCCCHHHHHhhChHHHHHHHHHH-HHHHHHHHHHHH
Confidence 888 777789999988865444 99999999999998 78988889999999999999999999999 777666666 77
Q ss_pred hcccccccCcceEEEecCcc-----------------cccchhhhhcCCC-------CCCceeeeccCcccCCC-CCeEE
Q 043585 154 DCCRTLIERLGSMVDVGGGN-----------------VLDLPHAVANTPQ-------TENLKYVADDMFQFIPP-ADAYF 208 (287)
Q Consensus 154 ~~~~~~~~~~~~vlDvGgG~-----------------v~Dlp~vi~~a~~-------~~Ri~~~~gd~~~~~p~-~D~~~ 208 (287)
.+ ++++ .+|||||||+ ++|+|.+++.+++ .+||+++.+|+++++|+ ||+|+
T Consensus 163 ~~---~~~~-~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~D~v~ 238 (334)
T 2ip2_A 163 LL---DFRG-RSFVDVGGGSGELTKAILQAEPSARGVMLDREGSLGVARDNLSSLLAGERVSLVGGDMLQEVPSNGDIYL 238 (334)
T ss_dssp HS---CCTT-CEEEEETCTTCHHHHHHHHHCTTCEEEEEECTTCTHHHHHHTHHHHHTTSEEEEESCTTTCCCSSCSEEE
T ss_pred hC---CCCC-CEEEEeCCCchHHHHHHHHHCCCCEEEEeCcHHHHHHHHHHHhhcCCCCcEEEecCCCCCCCCCCCCEEE
Confidence 77 5677 9999999999 7888888887764 47999999999998775 99999
Q ss_pred eccccccCChHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCCC----------------CCCCHHHHHHHHHhCCCc
Q 043585 209 FMLFFHAFGGEDSLKILKKCREAIAGNGQRGKVLIMDIVINEKEDE----------------DQRTDKEWKTLFLDAGFT 272 (287)
Q Consensus 209 l~~vlh~~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~----------------~~rt~~e~~~ll~~aGf~ 272 (287)
++++||+|+++++.++|++++++|+| ||+|+|.|.+.++...+ ++||.+||.++++++||+
T Consensus 239 ~~~vl~~~~~~~~~~~l~~~~~~L~p---gG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~ 315 (334)
T 2ip2_A 239 LSRIIGDLDEAASLRLLGNCREAMAG---DGRVVVIERTISASEPSPMSVLWDVHLFMACAGRHRTTEEVVDLLGRGGFA 315 (334)
T ss_dssp EESCGGGCCHHHHHHHHHHHHHHSCT---TCEEEEEECCBCSSSCCHHHHHHHHHHHHHHSCCCCBHHHHHHHHHHTTEE
T ss_pred EchhccCCCHHHHHHHHHHHHHhcCC---CCEEEEEEeccCCCCCcchhHHhhhHhHhhCCCcCCCHHHHHHHHHHCCCc
Confidence 99999999999999999999999999 99999999998765432 678999999999999999
Q ss_pred EEEEEecCCccceeC
Q 043585 273 CCKITTMFGLKSLIK 287 (287)
Q Consensus 273 ~~~~~~~~~~~s~ie 287 (287)
++++++.++..++||
T Consensus 316 ~~~~~~~~~~~~~i~ 330 (334)
T 2ip2_A 316 VERIVDLPMETRMIV 330 (334)
T ss_dssp EEEEEEETTTEEEEE
T ss_pred eeEEEECCCCCEEEE
Confidence 999999988888886
No 10
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=100.00 E-value=5.5e-40 Score=304.85 Aligned_cols=278 Identities=23% Similarity=0.407 Sum_probs=221.9
Q ss_pred CccCCCCChhhhchHHHHHH--HHHhhhhHHHHHHHHHHhChhhHhhhCC-----CCC-------C--------CChhhh
Q 043585 4 IENEGGVSVKELFEGHGQIT--GLFLNNLSPMSLKGAVELGRADIIHSHG-----KPT-------K--------TSNPFR 61 (287)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~l~--~~~~g~~~~~~L~~a~~lglfd~L~~~~-----~~~-------~--------~~~l~r 61 (287)
+++.+....+++.++...++ +++.|++.+++|++|++|||||+|++++ .++ . ++.+.|
T Consensus 8 ~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~l~~a~~lgif~~L~~~g~pg~~~t~~eLA~~~~~~~~~~~~~~~l~r 87 (372)
T 1fp1_D 8 KEDNQISATSEQTEDSACLSAMVLTTNLVYPAVLNAAIDLNLFEIIAKATPPGAFMSPSEIASKLPASTQHSDLPNRLDR 87 (372)
T ss_dssp -----------CCHHHHHHHHHHHHHTTHHHHHHHHHHHTTHHHHHHTCSSTTCCBCHHHHHTTSCGGGCCTTHHHHHHH
T ss_pred ccccccCchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHCChHHHHHhcCCCCCCcCHHHHHHhcCCCCCCCcChHHHHH
Confidence 45666777778888899999 9999999999999999999999999753 232 2 246888
Q ss_pred hhh----------h-----------ccccchhhhHhhcCCC-CChHhhHhhcCCcchHHHHHHHHHhHhcC-CCcccccc
Q 043585 62 FMQ----------E-----------DYDLTPISTLLIKDKS-YCLSPLVSGILDPDNIFLLHFISKLFKGN-DVSVWETV 118 (287)
Q Consensus 62 lLr----------~-----------~y~lt~~s~~L~~~~~-~~~~~~~~~~~~~~~~~~~~~L~~~lr~g-~~~~~~~~ 118 (287)
+|| . +|++|+.|++|++++| .++++++.+..++.++..|.+|++++++| + ++|+.+
T Consensus 88 lLr~L~~~gll~~~~~~~~~g~~~~~y~~t~~s~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~l~~g~~-~~~~~~ 166 (372)
T 1fp1_D 88 MLRLLASYSVLTSTTRTIEDGGAERVYGLSMVGKYLVPDESRGYLASFTTFLCYPALLQVWMNFKEAVVDEDI-DLFKNV 166 (372)
T ss_dssp HHHHHHHTTSEEEEEEECTTSCEEEEEEECTTGGGGSTTCTTCCCTHHHHHHTCHHHHHHHTTHHHHHHSCC--------
T ss_pred HHHHHhhCCceEecccccCCCCcCCeEecCHHHHHHhCCCCCCCHHHHHHHhcCchHHHHHHHHHHHHHcCCC-ChhHHH
Confidence 888 3 6999999999988877 68999998887677889999999999998 6 789999
Q ss_pred cCCChhhhhccCchHHHHHHHHHHhcccchhhH-hhhcccccccCcceEEEecCcc-----------------cccchhh
Q 043585 119 RGMKHWEIMSQNPRLSQRFNQAMVNDSEMATFI-VKDCCRTLIERLGSMVDVGGGN-----------------VLDLPHA 180 (287)
Q Consensus 119 ~g~~~~e~~~~~~~~~~~f~~aM~~~s~~~~~~-~~~~~~~~~~~~~~vlDvGgG~-----------------v~Dlp~v 180 (287)
+|.++|+++.++|+..+.|+++|...+....+. ++.+ + .+++..+|||||||. ++|+|.+
T Consensus 167 ~g~~~~~~~~~~~~~~~~f~~~m~~~~~~~~~~l~~~~-~-~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~~~~ 244 (372)
T 1fp1_D 167 HGVTKYEFMGKDKKMNQIFNKSMVDVCATEMKRMLEIY-T-GFEGISTLVDVGGGSGRNLELIISKYPLIKGINFDLPQV 244 (372)
T ss_dssp -------CCSSCHHHHHHHHHHHHHHHHHHHHHHHHHC-C-TTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHH
T ss_pred hCCCHHHHHHhCHHHHHHHHHHHHhhhHHHHHHHHHHh-h-ccCCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeChHHH
Confidence 999999999999999999999999887766666 7777 3 377889999999999 6799999
Q ss_pred hhcCCCCCCceeeeccCcccCCCCCeEEeccccccCChHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCC-------
Q 043585 181 VANTPQTENLKYVADDMFQFIPPADAYFFMLFFHAFGGEDSLKILKKCREAIAGNGQRGKVLIMDIVINEKED------- 253 (287)
Q Consensus 181 i~~a~~~~Ri~~~~gd~~~~~p~~D~~~l~~vlh~~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~------- 253 (287)
++.+++.++|+++.+|+++++|.+|+|+++++||+|+|+++.++|++++++|+| ||+|+|.|.+.++...
T Consensus 245 ~~~a~~~~~v~~~~~d~~~~~~~~D~v~~~~~lh~~~d~~~~~~l~~~~~~L~p---gG~l~i~e~~~~~~~~~~~~~~~ 321 (372)
T 1fp1_D 245 IENAPPLSGIEHVGGDMFASVPQGDAMILKAVCHNWSDEKCIEFLSNCHKALSP---NGKVIIVEFILPEEPNTSEESKL 321 (372)
T ss_dssp HTTCCCCTTEEEEECCTTTCCCCEEEEEEESSGGGSCHHHHHHHHHHHHHHEEE---EEEEEEEEEEECSSCCSSHHHHH
T ss_pred HHhhhhcCCCEEEeCCcccCCCCCCEEEEecccccCCHHHHHHHHHHHHHhcCC---CCEEEEEEeccCCCCccchHHHH
Confidence 999988788999999999988889999999999999999999999999999999 9999999998876532
Q ss_pred -------------CCCCCHHHHHHHHHhCCCcEEEEEec-CCccceeC
Q 043585 254 -------------EDQRTDKEWKTLFLDAGFTCCKITTM-FGLKSLIK 287 (287)
Q Consensus 254 -------------~~~rt~~e~~~ll~~aGf~~~~~~~~-~~~~s~ie 287 (287)
.++||.+||.++|+++||+++++++. .+..+|||
T Consensus 322 ~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~~~~~~~~vie 369 (372)
T 1fp1_D 322 VSTLDNLMFITVGGRERTEKQYEKLSKLSGFSKFQVACRAFNSLGVME 369 (372)
T ss_dssp HHHHHHHHHHHHSCCCEEHHHHHHHHHHTTCSEEEEEEEETTTEEEEE
T ss_pred HHHhhHHHHhccCCccCCHHHHHHHHHHCCCceEEEEEcCCCCeEEEE
Confidence 16789999999999999999999984 56348887
No 11
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=100.00 E-value=6.2e-39 Score=297.00 Aligned_cols=263 Identities=17% Similarity=0.224 Sum_probs=219.1
Q ss_pred hhhhchHHHHHHHHHhhhhHHHHHHHHHHhChhhHhhh--CCCCC---------CCChhhhhhh------------hccc
Q 043585 12 VKELFEGHGQITGLFLNNLSPMSLKGAVELGRADIIHS--HGKPT---------KTSNPFRFMQ------------EDYD 68 (287)
Q Consensus 12 ~~~~~~~~~~l~~~~~g~~~~~~L~~a~~lglfd~L~~--~~~~~---------~~~~l~rlLr------------~~y~ 68 (287)
+.++.++...+++++.|++.+++|++|++|||||+|++ ++.++ +++.+.|+|| ++|+
T Consensus 9 ~~~~~~a~~~l~~l~~g~~~~~~l~~a~~lgifd~L~~~~~~~t~~eLA~~~g~~~~~l~rlLr~l~~~g~l~~~~~~y~ 88 (363)
T 3dp7_A 9 QCTAAEAQRLAQEIAFGPVVFQVSRLMLKFGIFQLLSGKREGYTLQEISGRTGLTRYAAQVLLEASLTIGTILLEEDRYV 88 (363)
T ss_dssp CCCSTTHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHTCTTCBCHHHHHHHHTCCHHHHHHHHHHHHHHTSEEEETTEEE
T ss_pred chhHHHHHHHHHHHHhhHHHHHHHHHHHHhCHHHHHHhcCCCCCHHHHHHHhCcCHHHHHHHHHHHhhCCCeEecCCEEe
Confidence 34677889999999999999999999999999999998 33333 8889999998 7899
Q ss_pred cchhhhHhhcCCCCChHhhHhhcCCcchHHHHHHHHHhHhcCCCcccccccC--CChhhhhccCchHHHH----HHHHHH
Q 043585 69 LTPISTLLIKDKSYCLSPLVSGILDPDNIFLLHFISKLFKGNDVSVWETVRG--MKHWEIMSQNPRLSQR----FNQAMV 142 (287)
Q Consensus 69 lt~~s~~L~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~lr~g~~~~~~~~~g--~~~~e~~~~~~~~~~~----f~~aM~ 142 (287)
+|+.|++|+++++.+ .++.+. .+..++.|.+|++++|+|+ +++...+| .++|+++.++|+..+. |+++|.
T Consensus 89 ~t~~s~~L~~~~~~~--~~~~~~-~~~~~~~~~~L~~~lr~g~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~f~~~~~ 164 (363)
T 3dp7_A 89 LAKAGWFLLNDKMAR--VNMEFN-HDVNYQGLFHLEEALLNGR-PEGLKVFGEWPTIYEGLSQLPEQVQKSWFGFDHFYS 164 (363)
T ss_dssp ECHHHHHHHHCHHHH--HHHHHH-HHTTHHHHTTHHHHHHHSS-CGGGGGTCCCSSHHHHGGGSCHHHHHHHHHHHHHTT
T ss_pred cccchHHhhCCCccc--chheee-cHHhhhhHHHHHHHHhcCC-CccccccCchHhHHHHHhhCHHHHHHHHHHHHHHhh
Confidence 999999998876432 233333 3567899999999999998 57777888 6899999999987763 556655
Q ss_pred hcccchhhH-hhhcccccccCcceEEEecCcc-----------------cccchhhhhcCCC-------CCCceeeeccC
Q 043585 143 NDSEMATFI-VKDCCRTLIERLGSMVDVGGGN-----------------VLDLPHAVANTPQ-------TENLKYVADDM 197 (287)
Q Consensus 143 ~~s~~~~~~-~~~~~~~~~~~~~~vlDvGgG~-----------------v~Dlp~vi~~a~~-------~~Ri~~~~gd~ 197 (287)
..+ ... +..+ ...+..+|||||||+ ++|+|++++.+++ .+||+++.+|+
T Consensus 165 ~~~---~~~~l~~~---~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~ 238 (363)
T 3dp7_A 165 DQS---FGKALEIV---FSHHPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDLPQQLEMMRKQTAGLSGSERIHGHGANL 238 (363)
T ss_dssp CCC---CHHHHHHH---GGGCCSEEEEESCTTCHHHHHHHHHSTTCEEEEEECHHHHHHHHHHHTTCTTGGGEEEEECCC
T ss_pred hhh---HHHHHHHh---cccCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeCHHHHHHHHHHHHhcCcccceEEEEccc
Confidence 443 233 5555 336778999999999 7899999888764 36899999999
Q ss_pred ccc---CC-CCCeEEeccccccCChHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCCC-------------------
Q 043585 198 FQF---IP-PADAYFFMLFFHAFGGEDSLKILKKCREAIAGNGQRGKVLIMDIVINEKEDE------------------- 254 (287)
Q Consensus 198 ~~~---~p-~~D~~~l~~vlh~~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~------------------- 254 (287)
+++ +| +||+|+++++||+|+++++.++|++++++|+| ||+|+|+|.+.++....
T Consensus 239 ~~~~~~~p~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~p---gG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (363)
T 3dp7_A 239 LDRDVPFPTGFDAVWMSQFLDCFSEEEVISILTRVAQSIGK---DSKVYIMETLWDRQRYETASYCLTQISLYFTAMANG 315 (363)
T ss_dssp CSSSCCCCCCCSEEEEESCSTTSCHHHHHHHHHHHHHHCCT---TCEEEEEECCTTSCSSHHHHHHHHHHHHHHHHSSCS
T ss_pred cccCCCCCCCcCEEEEechhhhCCHHHHHHHHHHHHHhcCC---CcEEEEEeeccCCccccchhhHHHHhhhhHHhhhCC
Confidence 994 66 59999999999999999999999999999999 99999999988765321
Q ss_pred --CCCCHHHHHHHHHhCCCcEEEEEecCC-ccceeC
Q 043585 255 --DQRTDKEWKTLFLDAGFTCCKITTMFG-LKSLIK 287 (287)
Q Consensus 255 --~~rt~~e~~~ll~~aGf~~~~~~~~~~-~~s~ie 287 (287)
++||.+||.++|++|||+++++++..| ..++||
T Consensus 316 ~~~~~t~~e~~~ll~~AGf~~v~~~~~~g~~~svi~ 351 (363)
T 3dp7_A 316 NSKMFHSDDLIRCIENAGLEVEEIQDNIGLGHSILQ 351 (363)
T ss_dssp SCCSCCHHHHHHHHHTTTEEESCCCCCBTTTBEEEE
T ss_pred CCcccCHHHHHHHHHHcCCeEEEEEeCCCCCceEEE
Confidence 578999999999999999999998755 588886
No 12
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=100.00 E-value=4.7e-37 Score=284.53 Aligned_cols=265 Identities=20% Similarity=0.280 Sum_probs=226.5
Q ss_pred chHHHHHHHHHhhhhHHHHHHHHHHhChhhHhhhCCCCC---------CCChhhhhhh-------------h--ccccch
Q 043585 16 FEGHGQITGLFLNNLSPMSLKGAVELGRADIIHSHGKPT---------KTSNPFRFMQ-------------E--DYDLTP 71 (287)
Q Consensus 16 ~~~~~~l~~~~~g~~~~~~L~~a~~lglfd~L~~~~~~~---------~~~~l~rlLr-------------~--~y~lt~ 71 (287)
.+....+++++.|++.+++|++++++|||++|.+++.++ +++.+.|+|| + .|.+|+
T Consensus 14 ~~~~~~l~~~~~~~~~~~~l~~~~~l~i~~~l~~~~~t~~eLA~~~g~~~~~l~r~Lr~L~~~Gll~~~~~~~~~y~~t~ 93 (374)
T 1qzz_A 14 DQDLDVLLKNLGNLVTPMALRVAATLRLVDHLLAGADTLAGLADRTDTHPQALSRLVRHLTVVGVLEGGEKQGRPLRPTR 93 (374)
T ss_dssp HHHHHHHHHTTTCCHHHHHHHHHHHTTHHHHHHTTCCSHHHHHHHHTCCHHHHHHHHHHHHHTTSEECCCC-CCCCEECT
T ss_pred chHHHHHHHHHHhhHHHHHHHHHHHcChHHHHhCCCCCHHHHHHHhCcCHHHHHHHHHHHhhCCCEEEeCCCCeEEEECh
Confidence 345668999999999999999999999999997665454 8889999998 5 899999
Q ss_pred hhhHhhcCCCCChHhhHhhcCCcchH-HHHHHHHHhHhcCCCcccccccCCChhhhhccCchHHHHHHHHHHhcccchhh
Q 043585 72 ISTLLIKDKSYCLSPLVSGILDPDNI-FLLHFISKLFKGNDVSVWETVRGMKHWEIMSQNPRLSQRFNQAMVNDSEMATF 150 (287)
Q Consensus 72 ~s~~L~~~~~~~~~~~~~~~~~~~~~-~~~~~L~~~lr~g~~~~~~~~~g~~~~e~~~~~~~~~~~f~~aM~~~s~~~~~ 150 (287)
.++.|+++++.++++++.+..++..+ ..|.+|.+++++|+ ++|...+|.++|+++..+|+..+.|+++|...+....+
T Consensus 94 ~s~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-~~~~~~~g~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~ 172 (374)
T 1qzz_A 94 LGMLLADGHPAQQRAWLDLNGAVSHADLAFTGLLDVVRTGR-PAYAGRYGRPFWEDLSADVALADSFDALMSCDEDLAYE 172 (374)
T ss_dssp TGGGGSTTCTTCHHHHHCTTSHHHHHHGGGGGHHHHHHHSC-CSHHHHHSSCHHHHHHHCHHHHHHHHHTCGGGSTTTTH
T ss_pred HHHhhcCCCcccHHHHHHHcCChhhHHHHHHHHHHHHhcCC-ChhhhhhCCCHHHHHhhChHHHHHHHHHHHHhhHhHHH
Confidence 99999988888999998887544456 88999999999998 68888889999999999999999999999988776666
Q ss_pred H-hhhcccccccCcceEEEecCcc-----------------cccchhhhhcCCC-------CCCceeeeccCcccCCC-C
Q 043585 151 I-VKDCCRTLIERLGSMVDVGGGN-----------------VLDLPHAVANTPQ-------TENLKYVADDMFQFIPP-A 204 (287)
Q Consensus 151 ~-~~~~~~~~~~~~~~vlDvGgG~-----------------v~Dlp~vi~~a~~-------~~Ri~~~~gd~~~~~p~-~ 204 (287)
. ++.+ ++.+..+|||||||+ ++|+|.+++.+++ .+||+++.+|+++++|. +
T Consensus 173 ~~~~~~---~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 249 (374)
T 1qzz_A 173 APADAY---DWSAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVELAGPAERARRRFADAGLADRVTVAEGDFFKPLPVTA 249 (374)
T ss_dssp HHHHTS---CCTTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSCCE
T ss_pred HHHHhC---CCCCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeCHHHHHHHHHHHHhcCCCCceEEEeCCCCCcCCCCC
Confidence 6 7777 567789999999999 6888888888764 35899999999987775 9
Q ss_pred CeEEeccccccCChHHHHHHHHHHHHHhcCCCCCcEEEEEee--ccCCCCCC----------------CCCCHHHHHHHH
Q 043585 205 DAYFFMLFFHAFGGEDSLKILKKCREAIAGNGQRGKVLIMDI--VINEKEDE----------------DQRTDKEWKTLF 266 (287)
Q Consensus 205 D~~~l~~vlh~~~d~~~~~iL~~~~~al~~~~~~g~lli~e~--~~~~~~~~----------------~~rt~~e~~~ll 266 (287)
|+|++++++|+|+++++.++|++++++|+| ||+++|+|. +.++.... +.||.++|.++|
T Consensus 250 D~v~~~~vl~~~~~~~~~~~l~~~~~~L~p---gG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll 326 (374)
T 1qzz_A 250 DVVLLSFVLLNWSDEDALTILRGCVRALEP---GGRLLVLDRADVEGDGADRFFSTLLDLRMLTFMGGRVRTRDEVVDLA 326 (374)
T ss_dssp EEEEEESCGGGSCHHHHHHHHHHHHHHEEE---EEEEEEEECCH-------HHHHHHHHHHHHHHHSCCCCCHHHHHHHH
T ss_pred CEEEEeccccCCCHHHHHHHHHHHHHhcCC---CcEEEEEechhhcCCCCCcchhhhcchHHHHhCCCcCCCHHHHHHHH
Confidence 999999999999999999999999999999 999999999 77654321 668999999999
Q ss_pred HhCCCcEEEEEecCCcc-----ceeC
Q 043585 267 LDAGFTCCKITTMFGLK-----SLIK 287 (287)
Q Consensus 267 ~~aGf~~~~~~~~~~~~-----s~ie 287 (287)
+++||+++++.+.++.. ++||
T Consensus 327 ~~aGf~~~~~~~~~~~~~~~~~~~i~ 352 (374)
T 1qzz_A 327 GSAGLALASERTSGSTTLPFDFSILE 352 (374)
T ss_dssp HTTTEEEEEEEEECCSSCSSCEEEEE
T ss_pred HHCCCceEEEEECCCCcccCCcEEEE
Confidence 99999999999987766 7775
No 13
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=100.00 E-value=8.9e-37 Score=281.47 Aligned_cols=263 Identities=20% Similarity=0.325 Sum_probs=228.2
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHhChhhHhhhCCCCC---------CCChhhhhhh-------------hccccchhhhH
Q 043585 18 GHGQITGLFLNNLSPMSLKGAVELGRADIIHSHGKPT---------KTSNPFRFMQ-------------EDYDLTPISTL 75 (287)
Q Consensus 18 ~~~~l~~~~~g~~~~~~L~~a~~lglfd~L~~~~~~~---------~~~~l~rlLr-------------~~y~lt~~s~~ 75 (287)
...++++++.|++.+++|++++++|||++|.+++.++ ++..+.|+|| ++|++|+.+++
T Consensus 19 ~~~~~~~~~~~~~~~~~l~~~~~l~i~~~l~~~~~t~~ela~~~~~~~~~l~r~L~~L~~~g~~~~~~~g~y~~t~~s~~ 98 (360)
T 1tw3_A 19 DALRTLIRLGSLHTPMVVRTAATLRLVDHILAGARTVKALAARTDTRPEALLRLIRHLVAIGLLEEDAPGEFVPTEVGEL 98 (360)
T ss_dssp HHHHHHHHHHCSHHHHHHHHHHHTTHHHHHHTTCCBHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEETTEEEECTTGGG
T ss_pred chHHHHHHHHhHHHHHHHHHHHHhCHHHHHhCCCCCHHHHHHHhCcCHHHHHHHHHHHHHCCCEEecCCCeEEeCHHHHH
Confidence 3677899999999999999999999999997665443 7888999998 68999999999
Q ss_pred hhcCCCCChHhhHhhcCCcc-hHHHHHHHHHhHhcCCCcccccccCCChhhhhccCchHHHHHHHHHHhcccchhhH-hh
Q 043585 76 LIKDKSYCLSPLVSGILDPD-NIFLLHFISKLFKGNDVSVWETVRGMKHWEIMSQNPRLSQRFNQAMVNDSEMATFI-VK 153 (287)
Q Consensus 76 L~~~~~~~~~~~~~~~~~~~-~~~~~~~L~~~lr~g~~~~~~~~~g~~~~e~~~~~~~~~~~f~~aM~~~s~~~~~~-~~ 153 (287)
|++++|.++++++.+..++. .+..|.+|.+++++|+ ++|+..+|.++|+++..+|+....|.++|...+....+. ++
T Consensus 99 l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~g~-~~~~~~~g~~~~~~~~~~p~~~~~f~~~~~~~~~~~~~~l~~ 177 (360)
T 1tw3_A 99 LADDHPAAQRAWHDLTQAVARADISFTRLPDAIRTGR-PTYESIYGKPFYEDLAGRPDLRASFDSLLACDQDVAFDAPAA 177 (360)
T ss_dssp GSTTSTTCHHHHTCTTSHHHHHGGGGGGHHHHHHHCC-CCHHHHHSSCHHHHHHTCHHHHHHHHHHHTTTTTTTTHHHHH
T ss_pred HhcCCchhHHHHHHHhcCchhHHHHHHHHHHHHHcCC-CHHHHhcCCCHHHHHHhChHHHHHHHHHHHHHHHHhHHHHHH
Confidence 99888889999888775433 5688999999999998 678888899999999999999999999999888776666 77
Q ss_pred hcccccccCcceEEEecCcc-----------------cccchhhhhcCCC-------CCCceeeeccCcccCCC-CCeEE
Q 043585 154 DCCRTLIERLGSMVDVGGGN-----------------VLDLPHAVANTPQ-------TENLKYVADDMFQFIPP-ADAYF 208 (287)
Q Consensus 154 ~~~~~~~~~~~~vlDvGgG~-----------------v~Dlp~vi~~a~~-------~~Ri~~~~gd~~~~~p~-~D~~~ 208 (287)
.+ ++.+..+|||||||+ .+|+|.+++.+++ .+||+++.+|+++++|. +|+|+
T Consensus 178 ~~---~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~D~v~ 254 (360)
T 1tw3_A 178 AY---DWTNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEMAGTVDTARSYLKDEGLSDRVDVVEGDFFEPLPRKADAII 254 (360)
T ss_dssp HS---CCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECTTHHHHHHHHHHHTTCTTTEEEEECCTTSCCSSCEEEEE
T ss_pred hC---CCccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecCHHHHHHHHHHHHhcCCCCceEEEeCCCCCCCCCCccEEE
Confidence 77 667788999999999 5788888887763 35899999999987775 99999
Q ss_pred eccccccCChHHHHHHHHHHHHHhcCCCCCcEEEEEeec-cCCCCCC----------------CCCCHHHHHHHHHhCCC
Q 043585 209 FMLFFHAFGGEDSLKILKKCREAIAGNGQRGKVLIMDIV-INEKEDE----------------DQRTDKEWKTLFLDAGF 271 (287)
Q Consensus 209 l~~vlh~~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~-~~~~~~~----------------~~rt~~e~~~ll~~aGf 271 (287)
++++||+|+++++.++|++++++|+| ||+++|.|.+ .++.... +.||.++|.++|+++||
T Consensus 255 ~~~vl~~~~~~~~~~~l~~~~~~L~p---gG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf 331 (360)
T 1tw3_A 255 LSFVLLNWPDHDAVRILTRCAEALEP---GGRILIHERDDLHENSFNEQFTELDLRMLVFLGGALRTREKWDGLAASAGL 331 (360)
T ss_dssp EESCGGGSCHHHHHHHHHHHHHTEEE---EEEEEEEECCBCGGGCCSHHHHHHHHHHHHHHSCCCCBHHHHHHHHHHTTE
T ss_pred EcccccCCCHHHHHHHHHHHHHhcCC---CcEEEEEEEeccCCCCCcchhhhccHHHhhhcCCcCCCHHHHHHHHHHCCC
Confidence 99999999999999999999999999 9999999998 6544321 67899999999999999
Q ss_pred cEEEEEecCCc-----cceeC
Q 043585 272 TCCKITTMFGL-----KSLIK 287 (287)
Q Consensus 272 ~~~~~~~~~~~-----~s~ie 287 (287)
+++++.+.++. .++||
T Consensus 332 ~~~~~~~~~~~~~~~~~~~i~ 352 (360)
T 1tw3_A 332 VVEEVRQLPSPTIPYDLSLLV 352 (360)
T ss_dssp EEEEEEEEECSSSSCEEEEEE
T ss_pred eEEEEEeCCCCcccCccEEEE
Confidence 99999988665 67775
No 14
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=100.00 E-value=9.3e-36 Score=273.87 Aligned_cols=255 Identities=15% Similarity=0.222 Sum_probs=209.3
Q ss_pred hhchHHHHHHHHHhhhhHHHHHHHHHHhChhhHhhhCCCCC---------CCChhhhhhh------------hccccchh
Q 043585 14 ELFEGHGQITGLFLNNLSPMSLKGAVELGRADIIHSHGKPT---------KTSNPFRFMQ------------EDYDLTPI 72 (287)
Q Consensus 14 ~~~~~~~~l~~~~~g~~~~~~L~~a~~lglfd~L~~~~~~~---------~~~~l~rlLr------------~~y~lt~~ 72 (287)
....++..+++++.|++.+++|++|++|||||+|.+ +.++ +++.+.|+|| ++|.+|+.
T Consensus 20 ~~l~~p~~l~~~~~~~~~~~~l~~a~~lgif~~l~~-~~t~~elA~~~~~~~~~l~rlLr~L~~~gll~~~~~~y~~t~~ 98 (352)
T 3mcz_A 20 AALTSVVDLVKLSDQYRQSAILHYAVADKLFDLTQT-GRTPAEVAASFGMVEGKAAILLHALAALGLLTKEGDAFRNTAL 98 (352)
T ss_dssp CCCCSHHHHHHHHHTHHHHHHHHHHHHTTHHHHTTS-CBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEETTEEEECHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHCChHHHhCC-CCCHHHHHHHhCcChHHHHHHHHHHHHCCCeEecCCeeecCHH
Confidence 334445559999999999999999999999999976 4443 8889999998 78999999
Q ss_pred hh-HhhcCCCCChHhhHhhcCCcchHHHHHHHHHhHhcCCCcccccccCCChhhhhccCchHHHHHHHHHHhcccchhhH
Q 043585 73 ST-LLIKDKSYCLSPLVSGILDPDNIFLLHFISKLFKGNDVSVWETVRGMKHWEIMSQNPRLSQRFNQAMVNDSEMATFI 151 (287)
Q Consensus 73 s~-~L~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~lr~g~~~~~~~~~g~~~~e~~~~~~~~~~~f~~aM~~~s~~~~~~ 151 (287)
++ +|.+++|.+++.++.+. ...++.|.+|++++++|++.+|+.. .++..+|+..+.|.++|...... ...
T Consensus 99 s~~~l~~~~~~~~~~~~~~~--~~~~~~~~~l~~~l~~g~~~~f~~~------~~~~~~~~~~~~f~~~m~~~~~~-~~~ 169 (352)
T 3mcz_A 99 TERYLTTTSADYIGPIVEHQ--YLQWDNWPRLGEILRSEKPLAFQQE------SRFAHDTRARDAFNDAMVRLSQP-MVD 169 (352)
T ss_dssp HHHHHSTTCTTCCHHHHHHH--HTTTTTGGGHHHHHTCSSCCTTSHH------HHTTTCHHHHHHHHHHHHHHHHH-HHH
T ss_pred HHhhccCCChhhHHHHHHHh--HHHHHHHHHHHHHHhCCCCCCcccc------cccccCHHHHHHHHHHHHhhhhh-HHH
Confidence 98 67788888898888765 3567899999999999985444322 23467899999999999984322 124
Q ss_pred -hhhcccccccC-cceEEEecCcc-----------------cccchhhhhcCCC-------CCCceeeeccCccc---CC
Q 043585 152 -VKDCCRTLIER-LGSMVDVGGGN-----------------VLDLPHAVANTPQ-------TENLKYVADDMFQF---IP 202 (287)
Q Consensus 152 -~~~~~~~~~~~-~~~vlDvGgG~-----------------v~Dlp~vi~~a~~-------~~Ri~~~~gd~~~~---~p 202 (287)
++.+ ++.+ ..+|||||||+ ++|+|++++.+++ .+||+++.+|++++ .|
T Consensus 170 ~l~~~---~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 246 (352)
T 3mcz_A 170 VVSEL---GVFARARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDLPTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFEG 246 (352)
T ss_dssp HHHTC---GGGTTCCEEEEETCTTCHHHHHHHHHCTTCEEEEEECGGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGTT
T ss_pred HHHhC---CCcCCCCEEEEeCCCcCHHHHHHHHhCCCCeEEEEECHHHHHHHHHHHHhcCCCCceEEEeCCcccCcccCC
Confidence 7777 5666 89999999999 7899988887763 46899999999994 45
Q ss_pred C-CCeEEeccccccCChHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCCC------------------CCCCHHHHH
Q 043585 203 P-ADAYFFMLFFHAFGGEDSLKILKKCREAIAGNGQRGKVLIMDIVINEKEDE------------------DQRTDKEWK 263 (287)
Q Consensus 203 ~-~D~~~l~~vlh~~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~------------------~~rt~~e~~ 263 (287)
+ ||+|+++++||+|+++++.++|++++++|+| ||+|+|+|.+.++.... +.||.+||+
T Consensus 247 ~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~p---gG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~ 323 (352)
T 3mcz_A 247 GAADVVMLNDCLHYFDAREAREVIGHAAGLVKP---GGALLILTMTMNDDRVTPALSADFSLHMMVNTNHGELHPTPWIA 323 (352)
T ss_dssp CCEEEEEEESCGGGSCHHHHHHHHHHHHHTEEE---EEEEEEEEECCCTTSSSSHHHHHHHHHHHHHSTTCCCCCHHHHH
T ss_pred CCccEEEEecccccCCHHHHHHHHHHHHHHcCC---CCEEEEEEeccCCCCCCCchHHHhhHHHHhhCCCCCcCCHHHHH
Confidence 4 9999999999999999999999999999999 99999999998776431 689999999
Q ss_pred HHHHhCCCcEEEEEecCCcccee
Q 043585 264 TLFLDAGFTCCKITTMFGLKSLI 286 (287)
Q Consensus 264 ~ll~~aGf~~~~~~~~~~~~s~i 286 (287)
++|+++||++++.. .|..+++
T Consensus 324 ~ll~~aGf~~~~~~--~g~~~l~ 344 (352)
T 3mcz_A 324 GVVRDAGLAVGERS--IGRYTLL 344 (352)
T ss_dssp HHHHHTTCEEEEEE--ETTEEEE
T ss_pred HHHHHCCCceeeec--cCceEEE
Confidence 99999999999843 2444443
No 15
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=100.00 E-value=1.8e-35 Score=273.10 Aligned_cols=258 Identities=18% Similarity=0.290 Sum_probs=221.0
Q ss_pred ChhhhchHHHHHHHHHh-hhhHHHHHHHHHHhChhhHhhhCCCCC---------CCChhhhhhh------------hccc
Q 043585 11 SVKELFEGHGQITGLFL-NNLSPMSLKGAVELGRADIIHSHGKPT---------KTSNPFRFMQ------------EDYD 68 (287)
Q Consensus 11 ~~~~~~~~~~~l~~~~~-g~~~~~~L~~a~~lglfd~L~~~~~~~---------~~~~l~rlLr------------~~y~ 68 (287)
+.+++.++..++++++. |++.+++|++|++|||||+|.+++.++ +++.+.|+|| ++|+
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~lgif~~L~~~~~t~~eLA~~~g~~~~~l~rlLr~L~~~gll~~~~~~y~ 102 (359)
T 1x19_A 23 SNNDLLNYYHRANELVFKGLIEFSCMKAAIELDLFSHMAEGPKDLATLAADTGSVPPRLEMLLETLRQMRVINLEDGKWS 102 (359)
T ss_dssp CCCHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTHHHHHTTCCBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEETTEEE
T ss_pred CccccCCcchHHHHHHHHHHHHHHHHHHHHHcCcHHHHcCCCCCHHHHHHHhCcChHHHHHHHHHHHhCCCeEeeCCeEe
Confidence 44567788889999996 899999999999999999999765454 8889999998 7899
Q ss_pred cchhh-hHhhcCCC---CChHhhHhhcCCcchHHHHHHHHHhHhcCCCcccccccCCChhhhhccCch---HHHHHHHHH
Q 043585 69 LTPIS-TLLIKDKS---YCLSPLVSGILDPDNIFLLHFISKLFKGNDVSVWETVRGMKHWEIMSQNPR---LSQRFNQAM 141 (287)
Q Consensus 69 lt~~s-~~L~~~~~---~~~~~~~~~~~~~~~~~~~~~L~~~lr~g~~~~~~~~~g~~~~e~~~~~~~---~~~~f~~aM 141 (287)
+|+.+ .+|++++| .++++++.+. .+..++.|.+|++++++|++ |+++.++|+ ..+.|.++|
T Consensus 103 ~t~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~L~~~l~~g~~-----------~~~~~~~p~~~~~~~~f~~~m 170 (359)
T 1x19_A 103 LTEFADYMFSPTPKEPNLHQTPVAKAM-AFLADDFYMGLSQAVRGQKN-----------FKGQVPYPPVTREDNLYFEEI 170 (359)
T ss_dssp ECHHHHHHSSSSCSBTTBCCHHHHHHH-HHHHHHTGGGHHHHHTTSCC-----------CCCSSCSSCCSHHHHHHHHHH
T ss_pred cCHHHHHHhcCCCCCccccHHHHHHHH-HHHHHHHHHHHHHHHhcCCC-----------CcccccCchhhHHHHHHHHHH
Confidence 99974 48888887 7899888886 35778999999999998862 677788999 999999999
Q ss_pred Hhccc-chhhH-hhhcccccccCcceEEEecCcc-----------------cccchhhhhcCCC-------CCCceeeec
Q 043585 142 VNDSE-MATFI-VKDCCRTLIERLGSMVDVGGGN-----------------VLDLPHAVANTPQ-------TENLKYVAD 195 (287)
Q Consensus 142 ~~~s~-~~~~~-~~~~~~~~~~~~~~vlDvGgG~-----------------v~Dlp~vi~~a~~-------~~Ri~~~~g 195 (287)
...+. ...+. ++.+ ++.+..+|||||||. ++|+|.+++.+++ .+||+++.+
T Consensus 171 ~~~~~~~~~~~l~~~~---~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~ 247 (359)
T 1x19_A 171 HRSNAKFAIQLLLEEA---KLDGVKKMIDVGGGIGDISAAMLKHFPELDSTILNLPGAIDLVNENAAEKGVADRMRGIAV 247 (359)
T ss_dssp HHTTCHHHHHHHHHHC---CCTTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEECGGGHHHHHHHHHHTTCTTTEEEEEC
T ss_pred HHhccchhHHHHHHhc---CCCCCCEEEEECCcccHHHHHHHHHCCCCeEEEEecHHHHHHHHHHHHhcCCCCCEEEEeC
Confidence 99987 66666 7777 677889999999999 7888888888763 468999999
Q ss_pred cCcc-cCCCCCeEEeccccccCChHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCC---------------CCC---
Q 043585 196 DMFQ-FIPPADAYFFMLFFHAFGGEDSLKILKKCREAIAGNGQRGKVLIMDIVINEKED---------------EDQ--- 256 (287)
Q Consensus 196 d~~~-~~p~~D~~~l~~vlh~~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~---------------~~~--- 256 (287)
|+++ ++|++|+|+++++||+|+|+++.++|++++++|+| ||+++|+|.+.++... .++
T Consensus 248 d~~~~~~~~~D~v~~~~vlh~~~d~~~~~~l~~~~~~L~p---gG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 324 (359)
T 1x19_A 248 DIYKESYPEADAVLFCRILYSANEQLSTIMCKKAFDAMRS---GGRLLILDMVIDDPENPNFDYLSHYILGAGMPFSVLG 324 (359)
T ss_dssp CTTTSCCCCCSEEEEESCGGGSCHHHHHHHHHHHHTTCCT---TCEEEEEEECCCCTTSCCHHHHHHHGGGGGSSCCCCC
T ss_pred ccccCCCCCCCEEEEechhccCCHHHHHHHHHHHHHhcCC---CCEEEEEecccCCCCCchHHHHHHHHHhcCCCCcccC
Confidence 9998 56678999999999999999999999999999999 9999999988765311 134
Q ss_pred -CCHHHHHHHHHhCCCcEEEEEecCCccceeC
Q 043585 257 -RTDKEWKTLFLDAGFTCCKITTMFGLKSLIK 287 (287)
Q Consensus 257 -rt~~e~~~ll~~aGf~~~~~~~~~~~~s~ie 287 (287)
||.+||.++|+++||+++++.+.+ ..++||
T Consensus 325 ~~t~~e~~~ll~~aGf~~v~~~~~~-~~~vi~ 355 (359)
T 1x19_A 325 FKEQARYKEILESLGYKDVTMVRKY-DHLLVQ 355 (359)
T ss_dssp CCCGGGHHHHHHHHTCEEEEEEEET-TEEEEE
T ss_pred CCCHHHHHHHHHHCCCceEEEEecC-CceEEE
Confidence 899999999999999999999877 666664
No 16
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=100.00 E-value=1.5e-35 Score=270.12 Aligned_cols=256 Identities=16% Similarity=0.183 Sum_probs=221.5
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHhChhhHhhhCCCCC---------CCChhhhhhh------------hccccchhh-hHh
Q 043585 19 HGQITGLFLNNLSPMSLKGAVELGRADIIHSHGKPT---------KTSNPFRFMQ------------EDYDLTPIS-TLL 76 (287)
Q Consensus 19 ~~~l~~~~~g~~~~~~L~~a~~lglfd~L~~~~~~~---------~~~~l~rlLr------------~~y~lt~~s-~~L 76 (287)
+..+++++.|++.+++|++|++||||++|++++.++ +++.+.|+|| ++|++|+.+ ++|
T Consensus 7 ~~~l~~~~~~~~~~~~l~~~~~l~i~~~l~~~~~t~~ela~~~~~~~~~l~r~L~~L~~~g~l~~~~~~y~~t~~~~~~l 86 (335)
T 2r3s_A 7 PALFFNTVNAYQRSAAIKAAVELNVFTAISQGIESSQSLAQKCQTSERGMRMLCDYLVIIGFMTKQAEGYRLTSDSAMFL 86 (335)
T ss_dssp SHHHHHHHTTHHHHHHHHHHHHTTHHHHHTTSEECHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEETTEEEECHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcChHHHHhcCCCCHHHHHHHhCCCchHHHHHHHHHHhcCCeEecCCEEecCHHHHHHh
Confidence 467999999999999999999999999999754443 8889999998 789999999 589
Q ss_pred hcCCCCChHhhHhhcCCcchHHHHHHHHHhHhcCCCcccccccCCChhhhhccCchHHHHHHHHHHhcccchhhH-hhhc
Q 043585 77 IKDKSYCLSPLVSGILDPDNIFLLHFISKLFKGNDVSVWETVRGMKHWEIMSQNPRLSQRFNQAMVNDSEMATFI-VKDC 155 (287)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~lr~g~~~~~~~~~g~~~~e~~~~~~~~~~~f~~aM~~~s~~~~~~-~~~~ 155 (287)
.++++.++++++.+..++..+..|.+|++++++|+ ++|+ + |+++.++|+....|.++|...+...... ++.+
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-~~~~-----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (335)
T 2r3s_A 87 DRQSKFYVGDAIEFLLSPMITNGFNDLTAAVLKGG-TAIS-----S-EGTLSPEHPVWVQFAKAMSPMMANPAQLIAQLV 159 (335)
T ss_dssp CTTSTTCCGGGHHHHTCHHHHGGGTTHHHHHHHTS-CCST-----T-TGGGSTTCTHHHHHHHHSGGGGHHHHHHHHHHH
T ss_pred ccCCcHHHHHHHHHhcchhhHHHHHhHHHHHhcCC-CCCC-----C-cccccCCHHHHHHHHHHHHHHHhhhHHHHHHhc
Confidence 88888889999998865577899999999999987 4554 3 8888899999999999999887665556 7777
Q ss_pred ccccc--cCcceEEEecCcc-----------------cccchhhhhcCCC-------CCCceeeeccCcc-cCCC-CCeE
Q 043585 156 CRTLI--ERLGSMVDVGGGN-----------------VLDLPHAVANTPQ-------TENLKYVADDMFQ-FIPP-ADAY 207 (287)
Q Consensus 156 ~~~~~--~~~~~vlDvGgG~-----------------v~Dlp~vi~~a~~-------~~Ri~~~~gd~~~-~~p~-~D~~ 207 (287)
++ .+..+|||||||. ++|++.+++.+++ .+||+++.+|+++ +.|+ +|+|
T Consensus 160 ---~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~v 236 (335)
T 2r3s_A 160 ---NENKIEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWASVLEVAKENARIQGVASRYHTIAGSAFEVDYGNDYDLV 236 (335)
T ss_dssp ---TC--CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECHHHHHHHHHHHHHHTCGGGEEEEESCTTTSCCCSCEEEE
T ss_pred ---ccccCCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecHHHHHHHHHHHHhcCCCcceEEEecccccCCCCCCCcEE
Confidence 45 7788999999998 6888888877764 4689999999998 5664 9999
Q ss_pred EeccccccCChHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCC------------------CCCCCHHHHHHHHHhC
Q 043585 208 FFMLFFHAFGGEDSLKILKKCREAIAGNGQRGKVLIMDIVINEKED------------------EDQRTDKEWKTLFLDA 269 (287)
Q Consensus 208 ~l~~vlh~~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~------------------~~~rt~~e~~~ll~~a 269 (287)
++++++|+|+++++.++|++++++|+| ||+++|+|...++... .+.||.++|.++++++
T Consensus 237 ~~~~~l~~~~~~~~~~~l~~~~~~L~p---gG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~ll~~a 313 (335)
T 2r3s_A 237 LLPNFLHHFDVATCEQLLRKIKTALAV---EGKVIVFDFIPNSDRITPPDAAAFSLVMLATTPNGDAYTFAEYESMFSNA 313 (335)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHHHEEE---EEEEEEEECCCCTTSSCSHHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHT
T ss_pred EEcchhccCCHHHHHHHHHHHHHhCCC---CcEEEEEeecCCCCcCCchHHHHHHHHHHeeCCCCCcCCHHHHHHHHHHC
Confidence 999999999999999999999999999 9999999998876431 2678999999999999
Q ss_pred CCcEEEEEecCCccceeC
Q 043585 270 GFTCCKITTMFGLKSLIK 287 (287)
Q Consensus 270 Gf~~~~~~~~~~~~s~ie 287 (287)
||+.+++.+..+..++|+
T Consensus 314 Gf~~~~~~~~~~~~~~i~ 331 (335)
T 2r3s_A 314 GFSHSQLHSLPTTQQQVI 331 (335)
T ss_dssp TCSEEEEECCTTSSSEEE
T ss_pred CCCeeeEEECCCCceeEE
Confidence 999999999988777764
No 17
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.56 E-value=5e-15 Score=130.69 Aligned_cols=116 Identities=13% Similarity=0.179 Sum_probs=97.9
Q ss_pred ccCcceEEEecCcc-------------------cccc-hhhhhcCCC-------CCCceeeeccCcc-cCCCCCeEEecc
Q 043585 160 IERLGSMVDVGGGN-------------------VLDL-PHAVANTPQ-------TENLKYVADDMFQ-FIPPADAYFFML 211 (287)
Q Consensus 160 ~~~~~~vlDvGgG~-------------------v~Dl-p~vi~~a~~-------~~Ri~~~~gd~~~-~~p~~D~~~l~~ 211 (287)
.....+|||||||+ .+|. |.+++.|++ ..+|+++.+|+.+ +++++|+|++..
T Consensus 68 ~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~~~~~d~v~~~~ 147 (261)
T 4gek_A 68 VQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAIENASMVVLNF 147 (261)
T ss_dssp CCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCCCCSEEEEEEES
T ss_pred CCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeecccccccccccccceeee
Confidence 45678999999998 4676 777777753 5689999999988 666799999999
Q ss_pred ccccCChHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCCC---------------------------------CCCC
Q 043585 212 FFHAFGGEDSLKILKKCREAIAGNGQRGKVLIMDIVINEKEDE---------------------------------DQRT 258 (287)
Q Consensus 212 vlh~~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~---------------------------------~~rt 258 (287)
+||.+++++..++|++++++|+| ||++++.|....+.... ...|
T Consensus 148 ~l~~~~~~~~~~~l~~i~~~Lkp---GG~lii~e~~~~~~~~~~~~~~~~~~~~~~~~g~s~~ei~~~~~~l~~~~~~~s 224 (261)
T 4gek_A 148 TLQFLEPSERQALLDKIYQGLNP---GGALVLSEKFSFEDAKVGELLFNMHHDFKRANGYSELEISQKRSMLENVMLTDS 224 (261)
T ss_dssp CGGGSCHHHHHHHHHHHHHHEEE---EEEEEEEEEBCCSSHHHHHHHHHHHHHHHHHTTGGGSTTHHHHHHHHHHCCCBC
T ss_pred eeeecCchhHhHHHHHHHHHcCC---CcEEEEEeccCCCCHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhhhcccccCCC
Confidence 99999999989999999999999 99999999887654311 3468
Q ss_pred HHHHHHHHHhCCCcEEEEEe
Q 043585 259 DKEWKTLFLDAGFTCCKITT 278 (287)
Q Consensus 259 ~~e~~~ll~~aGf~~~~~~~ 278 (287)
.+++.++|++|||+.++++.
T Consensus 225 ~~~~~~~L~~AGF~~ve~~f 244 (261)
T 4gek_A 225 VETHKARLHKAGFEHSELWF 244 (261)
T ss_dssp HHHHHHHHHHHTCSEEEEEE
T ss_pred HHHHHHHHHHcCCCeEEEEE
Confidence 89999999999999988763
No 18
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.49 E-value=4.7e-14 Score=121.24 Aligned_cols=121 Identities=17% Similarity=0.212 Sum_probs=98.0
Q ss_pred ccCcceEEEecCcc-----------------cccc-hhhhhcCCC----CCCceeeeccCcc-cCC-CCCeEEecccccc
Q 043585 160 IERLGSMVDVGGGN-----------------VLDL-PHAVANTPQ----TENLKYVADDMFQ-FIP-PADAYFFMLFFHA 215 (287)
Q Consensus 160 ~~~~~~vlDvGgG~-----------------v~Dl-p~vi~~a~~----~~Ri~~~~gd~~~-~~p-~~D~~~l~~vlh~ 215 (287)
..+..+|||||||. .+|. |.+++.+++ ..+++++.+|+.+ +.+ .+|+|++..++|+
T Consensus 42 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~l~~ 121 (234)
T 3dtn_A 42 DTENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGNLKVKYIEADYSKYDFEEKYDMVVSALSIHH 121 (234)
T ss_dssp SCSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSCTTEEEEESCTTTCCCCSCEEEEEEESCGGG
T ss_pred CCCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccCCCEEEEeCchhccCCCCCceEEEEeCcccc
Confidence 34568999999999 5666 666666543 3489999999988 444 4999999999999
Q ss_pred CChHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCC--------------------------------CCCCCHHHHH
Q 043585 216 FGGEDSLKILKKCREAIAGNGQRGKVLIMDIVINEKED--------------------------------EDQRTDKEWK 263 (287)
Q Consensus 216 ~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~--------------------------------~~~rt~~e~~ 263 (287)
+++++...+|+++++.|+| ||++++.+...++... ...+|.+++.
T Consensus 122 ~~~~~~~~~l~~~~~~Lkp---gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (234)
T 3dtn_A 122 LEDEDKKELYKRSYSILKE---SGIFINADLVHGETAFIENLNKTIWRQYVENSGLTEEEIAAGYERSKLDKDIEMNQQL 198 (234)
T ss_dssp SCHHHHHHHHHHHHHHEEE---EEEEEEEEECBCSSHHHHHHHHHHHHHHHHTSSCCHHHHHTTC----CCCCCBHHHHH
T ss_pred CCHHHHHHHHHHHHHhcCC---CcEEEEEEecCCCChhhhhHHHHHHHHHHHhcCCCHHHHHHHHHhcccccccCHHHHH
Confidence 9999888999999999999 9999999977654321 0446889999
Q ss_pred HHHHhCCCcEEEEEecCCcc
Q 043585 264 TLFLDAGFTCCKITTMFGLK 283 (287)
Q Consensus 264 ~ll~~aGf~~~~~~~~~~~~ 283 (287)
++|++|||+.++++......
T Consensus 199 ~ll~~aGF~~v~~~~~~~~~ 218 (234)
T 3dtn_A 199 NWLKEAGFRDVSCIYKYYQF 218 (234)
T ss_dssp HHHHHTTCEEEEEEEEETTE
T ss_pred HHHHHcCCCceeeeeeecce
Confidence 99999999999888664433
No 19
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.39 E-value=6.9e-13 Score=112.70 Aligned_cols=117 Identities=14% Similarity=0.254 Sum_probs=94.3
Q ss_pred ccCcceEEEecCcc---------------cccc-hhhhhcCCC--CCCceeeeccCcc-cCC-CCCeEEeccccccCChH
Q 043585 160 IERLGSMVDVGGGN---------------VLDL-PHAVANTPQ--TENLKYVADDMFQ-FIP-PADAYFFMLFFHAFGGE 219 (287)
Q Consensus 160 ~~~~~~vlDvGgG~---------------v~Dl-p~vi~~a~~--~~Ri~~~~gd~~~-~~p-~~D~~~l~~vlh~~~d~ 219 (287)
.....+|||||||. .+|. |.+++.+++ ..+++++.+|+.+ +.+ .+|+|++..++|++++.
T Consensus 43 ~~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~l~~~~~~ 122 (220)
T 3hnr_A 43 NKSFGNVLEFGVGTGNLTNKLLLAGRTVYGIEPSREMRMIAKEKLPKEFSITEGDFLSFEVPTSIDTIVSTYAFHHLTDD 122 (220)
T ss_dssp HTCCSEEEEECCTTSHHHHHHHHTTCEEEEECSCHHHHHHHHHHSCTTCCEESCCSSSCCCCSCCSEEEEESCGGGSCHH
T ss_pred ccCCCeEEEeCCCCCHHHHHHHhCCCeEEEEeCCHHHHHHHHHhCCCceEEEeCChhhcCCCCCeEEEEECcchhcCChH
Confidence 44678999999999 5666 666666654 2589999999998 554 59999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCCC----------------------CCCCHHHHHHHHHhCCCcEEEEE
Q 043585 220 DSLKILKKCREAIAGNGQRGKVLIMDIVINEKEDE----------------------DQRTDKEWKTLFLDAGFTCCKIT 277 (287)
Q Consensus 220 ~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~----------------------~~rt~~e~~~ll~~aGf~~~~~~ 277 (287)
+...+|+++++.|+| ||.+++.+...+..... .-+|.++|.++|+++||+++.+.
T Consensus 123 ~~~~~l~~~~~~Lkp---gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~v~~~~ 199 (220)
T 3hnr_A 123 EKNVAIAKYSQLLNK---GGKIVFADTIFADQDAYDKTVEAAKQRGFHQLANDLQTEYYTRIPVMQTIFENNGFHVTFTR 199 (220)
T ss_dssp HHHHHHHHHHHHSCT---TCEEEEEEECBSSHHHHHHHHHHHHHTTCHHHHHHHHHSCCCBHHHHHHHHHHTTEEEEEEE
T ss_pred HHHHHHHHHHHhcCC---CCEEEEEeccccChHHHHHHHHHHHhCCCccchhhcchhhcCCHHHHHHHHHHCCCEEEEee
Confidence 888899999999999 99999998765432210 23488999999999999887765
Q ss_pred ec
Q 043585 278 TM 279 (287)
Q Consensus 278 ~~ 279 (287)
..
T Consensus 200 ~~ 201 (220)
T 3hnr_A 200 LN 201 (220)
T ss_dssp CS
T ss_pred cc
Confidence 43
No 20
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.39 E-value=2.1e-13 Score=116.29 Aligned_cols=123 Identities=15% Similarity=0.184 Sum_probs=96.0
Q ss_pred cCcceEEEecCcc---------------cccc-hhhhhcCCC-----CCCceeeeccCcc-cCC--CCCeEEeccccccC
Q 043585 161 ERLGSMVDVGGGN---------------VLDL-PHAVANTPQ-----TENLKYVADDMFQ-FIP--PADAYFFMLFFHAF 216 (287)
Q Consensus 161 ~~~~~vlDvGgG~---------------v~Dl-p~vi~~a~~-----~~Ri~~~~gd~~~-~~p--~~D~~~l~~vlh~~ 216 (287)
....+|||||||. .+|. |.+++.+++ ..+++++.+|+.+ +++ .+|+|++..++|.+
T Consensus 37 ~~~~~vLDlG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~ 116 (227)
T 1ve3_A 37 KKRGKVLDLACGVGGFSFLLEDYGFEVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLSFEDKTFDYVIFIDSIVHF 116 (227)
T ss_dssp CSCCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCCSCTTCEEEEEEESCGGGC
T ss_pred CCCCeEEEEeccCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCCceEEECchhcCCCCCCcEEEEEEcCchHhC
Confidence 3467999999998 5666 677777654 3789999999988 555 49999999999888
Q ss_pred ChHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCC----------CC------------------------------CC
Q 043585 217 GGEDSLKILKKCREAIAGNGQRGKVLIMDIVINEKE----------DE------------------------------DQ 256 (287)
Q Consensus 217 ~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~----------~~------------------------------~~ 256 (287)
..++..++|+++++.|+| ||++++.+...+... .. ..
T Consensus 117 ~~~~~~~~l~~~~~~L~~---gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (227)
T 1ve3_A 117 EPLELNQVFKEVRRVLKP---SGKFIMYFTDLRELLPRLKESLVVGQKYWISKVIPDQEERTVVIEFKSEQDSFRVRFNV 193 (227)
T ss_dssp CHHHHHHHHHHHHHHEEE---EEEEEEEEECHHHHGGGCCC---------CCEEEEETTTTEEEEEC-----CCEEEEEC
T ss_pred CHHHHHHHHHHHHHHcCC---CcEEEEEecChHHHHHHHHhhhhcccceeecccccCccccEEEEEeccchhhheeehhh
Confidence 888889999999999999 999999876421100 00 01
Q ss_pred CCHHHHHHHHHhCCCcEEEEEecCCccceeC
Q 043585 257 RTDKEWKTLFLDAGFTCCKITTMFGLKSLIK 287 (287)
Q Consensus 257 rt~~e~~~ll~~aGf~~~~~~~~~~~~s~ie 287 (287)
++ .+|.++|+++||+.+++....+...+||
T Consensus 194 w~-~~~~~~l~~~GF~~v~~~~~~~~~~~i~ 223 (227)
T 1ve3_A 194 WG-KTGVELLAKLYFTKEAEEKVGNYSYLTV 223 (227)
T ss_dssp CC-HHHHHHHHTTTEEEEEEEEETTTEEEEE
T ss_pred hc-hHHHHHHHHHhhhHHHHHHhCCceeEEe
Confidence 11 5899999999999999999876666664
No 21
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.39 E-value=6.9e-13 Score=115.03 Aligned_cols=119 Identities=18% Similarity=0.252 Sum_probs=95.8
Q ss_pred ccCcceEEEecCcc----------------cccc-hhhhhcCCC----CCCceeeeccCcc-cCC--CCCeEEecccccc
Q 043585 160 IERLGSMVDVGGGN----------------VLDL-PHAVANTPQ----TENLKYVADDMFQ-FIP--PADAYFFMLFFHA 215 (287)
Q Consensus 160 ~~~~~~vlDvGgG~----------------v~Dl-p~vi~~a~~----~~Ri~~~~gd~~~-~~p--~~D~~~l~~vlh~ 215 (287)
.....+|||||||. .+|. |.+++.+++ ..+++++.+|+.+ +++ .+|+|++.++||+
T Consensus 91 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 170 (254)
T 1xtp_A 91 GHGTSRALDCGAGIGRITKNLLTKLYATTDLLEPVKHMLEEAKRELAGMPVGKFILASMETATLPPNTYDLIVIQWTAIY 170 (254)
T ss_dssp TCCCSEEEEETCTTTHHHHHTHHHHCSEEEEEESCHHHHHHHHHHTTTSSEEEEEESCGGGCCCCSSCEEEEEEESCGGG
T ss_pred ccCCCEEEEECCCcCHHHHHHHHhhcCEEEEEeCCHHHHHHHHHHhccCCceEEEEccHHHCCCCCCCeEEEEEcchhhh
Confidence 34678999999998 4554 566666553 3689999999987 554 4999999999999
Q ss_pred CChHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCC-------CCCCCHHHHHHHHHhCCCcEEEEEecCC
Q 043585 216 FGGEDSLKILKKCREAIAGNGQRGKVLIMDIVINEKED-------EDQRTDKEWKTLFLDAGFTCCKITTMFG 281 (287)
Q Consensus 216 ~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~-------~~~rt~~e~~~ll~~aGf~~~~~~~~~~ 281 (287)
+++++..++|+++++.|+| ||++++.+........ ...++.++|.++|+++||+++++....+
T Consensus 171 ~~~~~~~~~l~~~~~~Lkp---gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~~ 240 (254)
T 1xtp_A 171 LTDADFVKFFKHCQQALTP---NGYIFFKENCSTGDRFLVDKEDSSLTRSDIHYKRLFNESGVRVVKEAFQEE 240 (254)
T ss_dssp SCHHHHHHHHHHHHHHEEE---EEEEEEEEEBC--CCEEEETTTTEEEBCHHHHHHHHHHHTCCEEEEEECTT
T ss_pred CCHHHHHHHHHHHHHhcCC---CeEEEEEecCCCcccceecccCCcccCCHHHHHHHHHHCCCEEEEeeecCC
Confidence 9998899999999999999 9999999875543221 1557999999999999999998877643
No 22
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.38 E-value=2.9e-12 Score=108.33 Aligned_cols=118 Identities=20% Similarity=0.325 Sum_probs=93.7
Q ss_pred ccCcceEEEecCcc---------------cccc-hhhhhcCCC--CCCceeeeccCcccCC--CCCeEEeccccccCChH
Q 043585 160 IERLGSMVDVGGGN---------------VLDL-PHAVANTPQ--TENLKYVADDMFQFIP--PADAYFFMLFFHAFGGE 219 (287)
Q Consensus 160 ~~~~~~vlDvGgG~---------------v~Dl-p~vi~~a~~--~~Ri~~~~gd~~~~~p--~~D~~~l~~vlh~~~d~ 219 (287)
.....+|||||||. .+|. |.+++.+++ .++++++.+|+.+..+ .+|+|++..++|+++++
T Consensus 44 ~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~l~~~~~~ 123 (218)
T 3ou2_A 44 GNIRGDVLELASGTGYWTRHLSGLADRVTALDGSAEMIAEAGRHGLDNVEFRQQDLFDWTPDRQWDAVFFAHWLAHVPDD 123 (218)
T ss_dssp TTSCSEEEEESCTTSHHHHHHHHHSSEEEEEESCHHHHHHHGGGCCTTEEEEECCTTSCCCSSCEEEEEEESCGGGSCHH
T ss_pred CCCCCeEEEECCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHhcCCCCeEEEecccccCCCCCceeEEEEechhhcCCHH
Confidence 45567999999999 6776 667777664 4789999999988544 49999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCC---------C----------------CCCCHHHHHHHHHhCCCcEE
Q 043585 220 DSLKILKKCREAIAGNGQRGKVLIMDIVINEKED---------E----------------DQRTDKEWKTLFLDAGFTCC 274 (287)
Q Consensus 220 ~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~---------~----------------~~rt~~e~~~ll~~aGf~~~ 274 (287)
+...+|+++++.|+| ||++++.+...+.... + ...+.++|.++|+++||++.
T Consensus 124 ~~~~~l~~~~~~L~p---gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~v~ 200 (218)
T 3ou2_A 124 RFEAFWESVRSAVAP---GGVVEFVDVTDHERRLEQQDDSEPEVAVRRTLQDGRSFRIVKVFRSPAELTERLTALGWSCS 200 (218)
T ss_dssp HHHHHHHHHHHHEEE---EEEEEEEEECCCC------------CEEEEECTTSCEEEEECCCCCHHHHHHHHHHTTEEEE
T ss_pred HHHHHHHHHHHHcCC---CeEEEEEeCCCCccccchhhhcccccceeeecCCcchhhHhhcCCCHHHHHHHHHHCCCEEE
Confidence 889999999999999 9999999875532110 0 13489999999999999965
Q ss_pred EEEecC
Q 043585 275 KITTMF 280 (287)
Q Consensus 275 ~~~~~~ 280 (287)
.....+
T Consensus 201 ~~~~~~ 206 (218)
T 3ou2_A 201 VDEVHP 206 (218)
T ss_dssp EEEEET
T ss_pred eeeccc
Confidence 544433
No 23
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.37 E-value=5.8e-13 Score=111.88 Aligned_cols=116 Identities=16% Similarity=0.094 Sum_probs=96.1
Q ss_pred cceEEEecCcc---------------cccc-hhhhhcCCC-CCCceeeeccCcc-cCC--CCCeEEeccccccCChHHHH
Q 043585 163 LGSMVDVGGGN---------------VLDL-PHAVANTPQ-TENLKYVADDMFQ-FIP--PADAYFFMLFFHAFGGEDSL 222 (287)
Q Consensus 163 ~~~vlDvGgG~---------------v~Dl-p~vi~~a~~-~~Ri~~~~gd~~~-~~p--~~D~~~l~~vlh~~~d~~~~ 222 (287)
..+|||||||. .+|. |.+++.+++ ..+++++.+|+.+ +++ .+|+|++..++|++++++..
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~ 121 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASLGHQIEGLEPATRLVELARQTHPSVTFHHGTITDLSDSPKRWAGLLAWYSLIHMGPGELP 121 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHTTCCEEEECCCHHHHHHHHHHCTTSEEECCCGGGGGGSCCCEEEEEEESSSTTCCTTTHH
T ss_pred CCeEEEecCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHHhCCCCeEEeCcccccccCCCCeEEEEehhhHhcCCHHHHH
Confidence 78999999999 5665 666776665 6789999999988 554 49999999999999988889
Q ss_pred HHHHHHHHHhcCCCCCcEEEEEeeccCCCCC-------CCCCCHHHHHHHHHhCCCcEEEEEecCC
Q 043585 223 KILKKCREAIAGNGQRGKVLIMDIVINEKED-------EDQRTDKEWKTLFLDAGFTCCKITTMFG 281 (287)
Q Consensus 223 ~iL~~~~~al~~~~~~g~lli~e~~~~~~~~-------~~~rt~~e~~~ll~~aGf~~~~~~~~~~ 281 (287)
++|+++++.|+| ||++++.+...+.... ...++.++|.++|+++||+++++...++
T Consensus 122 ~~l~~~~~~L~p---gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~ 184 (203)
T 3h2b_A 122 DALVALRMAVED---GGGLLMSFFSGPSLEPMYHPVATAYRWPLPELAQALETAGFQVTSSHWDPR 184 (203)
T ss_dssp HHHHHHHHTEEE---EEEEEEEEECCSSCEEECCSSSCEEECCHHHHHHHHHHTTEEEEEEEECTT
T ss_pred HHHHHHHHHcCC---CcEEEEEEccCCchhhhhchhhhhccCCHHHHHHHHHHCCCcEEEEEecCC
Confidence 999999999999 9999998765443211 0457899999999999999999887654
No 24
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.37 E-value=1.9e-12 Score=112.73 Aligned_cols=118 Identities=20% Similarity=0.340 Sum_probs=97.6
Q ss_pred cccCcceEEEecCcc----------------cccc-hhhhhcCCC----CCCceeeeccCcc-cCC--CCCeEEeccccc
Q 043585 159 LIERLGSMVDVGGGN----------------VLDL-PHAVANTPQ----TENLKYVADDMFQ-FIP--PADAYFFMLFFH 214 (287)
Q Consensus 159 ~~~~~~~vlDvGgG~----------------v~Dl-p~vi~~a~~----~~Ri~~~~gd~~~-~~p--~~D~~~l~~vlh 214 (287)
......+|||||||. .+|. |..++.+++ .++++++.+|+.+ +++ .+|+|++..++|
T Consensus 52 ~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 131 (266)
T 3ujc_A 52 ELNENSKVLDIGSGLGGGCMYINEKYGAHTHGIDICSNIVNMANERVSGNNKIIFEANDILTKEFPENNFDLIYSRDAIL 131 (266)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHTCCSCTTEEEEECCTTTCCCCTTCEEEEEEESCGG
T ss_pred CCCCCCEEEEECCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhhcCCCeEEEECccccCCCCCCcEEEEeHHHHHH
Confidence 456678999999998 5665 556665543 3789999999988 555 499999999999
Q ss_pred cCChHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCC-C------------CCCCHHHHHHHHHhCCCcEEEEEec
Q 043585 215 AFGGEDSLKILKKCREAIAGNGQRGKVLIMDIVINEKED-E------------DQRTDKEWKTLFLDAGFTCCKITTM 279 (287)
Q Consensus 215 ~~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~-~------------~~rt~~e~~~ll~~aGf~~~~~~~~ 279 (287)
++++++...+|+++++.|+| ||++++.+...+.... . ..++.++|.++++++||+++++...
T Consensus 132 ~~~~~~~~~~l~~~~~~L~p---gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 206 (266)
T 3ujc_A 132 ALSLENKNKLFQKCYKWLKP---TGTLLITDYCATEKENWDDEFKEYVKQRKYTLITVEEYADILTACNFKNVVSKDL 206 (266)
T ss_dssp GSCHHHHHHHHHHHHHHEEE---EEEEEEEEEEESCGGGCCHHHHHHHHHHTCCCCCHHHHHHHHHHTTCEEEEEEEC
T ss_pred hcChHHHHHHHHHHHHHcCC---CCEEEEEEeccCCcccchHHHHHHHhcCCCCCCCHHHHHHHHHHcCCeEEEEEeC
Confidence 99988899999999999999 9999999987665211 1 4568999999999999999988765
No 25
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.37 E-value=2e-12 Score=113.06 Aligned_cols=118 Identities=17% Similarity=0.161 Sum_probs=93.0
Q ss_pred cCcceEEEecCcc---------------cccc-hhhhhcCCC-CCCceeeeccCcc-cCC-CCCeEEecc-ccccCCh-H
Q 043585 161 ERLGSMVDVGGGN---------------VLDL-PHAVANTPQ-TENLKYVADDMFQ-FIP-PADAYFFML-FFHAFGG-E 219 (287)
Q Consensus 161 ~~~~~vlDvGgG~---------------v~Dl-p~vi~~a~~-~~Ri~~~~gd~~~-~~p-~~D~~~l~~-vlh~~~d-~ 219 (287)
.+..+|||||||. .+|+ |.+++.+++ ..+++++.+|+.+ +.+ .+|+|++.. +||++.+ +
T Consensus 49 ~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~~l~~~~~~~ 128 (263)
T 3pfg_A 49 PKAASLLDVACGTGMHLRHLADSFGTVEGLELSADMLAIARRRNPDAVLHHGDMRDFSLGRRFSAVTCMFSSIGHLAGQA 128 (263)
T ss_dssp TTCCEEEEETCTTSHHHHHHTTTSSEEEEEESCHHHHHHHHHHCTTSEEEECCTTTCCCSCCEEEEEECTTGGGGSCHHH
T ss_pred CCCCcEEEeCCcCCHHHHHHHHcCCeEEEEECCHHHHHHHHhhCCCCEEEECChHHCCccCCcCEEEEcCchhhhcCCHH
Confidence 4568999999999 6776 777777765 5689999999988 444 499999998 9999854 6
Q ss_pred HHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCC----------------------------------------------
Q 043585 220 DSLKILKKCREAIAGNGQRGKVLIMDIVINEKED---------------------------------------------- 253 (287)
Q Consensus 220 ~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~---------------------------------------------- 253 (287)
+..++|+++++.|+| ||+++|.+...++.-.
T Consensus 129 ~~~~~l~~~~~~L~p---gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (263)
T 3pfg_A 129 ELDAALERFAAHVLP---DGVVVVEPWWFPENFTPGYVAAGTVEAGGTTVTRVSHSSREGEATRIEVHYLVAGPDRGITH 205 (263)
T ss_dssp HHHHHHHHHHHTEEE---EEEEEECCCCCTTTCCTTEEEEEEEEETTEEEEEEEEEEEETTEEEEEEEEEEEETTTEEEE
T ss_pred HHHHHHHHHHHhcCC---CcEEEEEeccChhhccccccccceeccCCceeEEEEEEEecCcEEEEEEEEEEecCCCcEEE
Confidence 778999999999999 8998886433322110
Q ss_pred ------CCCCCHHHHHHHHHhCCCcEEEEEecCC
Q 043585 254 ------EDQRTDKEWKTLFLDAGFTCCKITTMFG 281 (287)
Q Consensus 254 ------~~~rt~~e~~~ll~~aGf~~~~~~~~~~ 281 (287)
.+.+|.+||.++|++|||+++++....+
T Consensus 206 ~~~~~~~~~~t~~el~~ll~~aGF~v~~~~~~~~ 239 (263)
T 3pfg_A 206 HEESHRITLFTREQYERAFTAAGLSVEFMPGGPS 239 (263)
T ss_dssp EEEEEEEECCCHHHHHHHHHHTTEEEEEESSTTT
T ss_pred EEEEEEEEeecHHHHHHHHHHCCCEEEEeeCCCC
Confidence 0345899999999999999999876544
No 26
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.35 E-value=1.5e-12 Score=111.94 Aligned_cols=114 Identities=21% Similarity=0.324 Sum_probs=94.9
Q ss_pred ceEEEecCcc---------------cccc-hhhhhcCCC-------CCCceeeeccCcccCC--CCCeEEeccccccCCh
Q 043585 164 GSMVDVGGGN---------------VLDL-PHAVANTPQ-------TENLKYVADDMFQFIP--PADAYFFMLFFHAFGG 218 (287)
Q Consensus 164 ~~vlDvGgG~---------------v~Dl-p~vi~~a~~-------~~Ri~~~~gd~~~~~p--~~D~~~l~~vlh~~~d 218 (287)
.+|||||||. .+|. |.+++.+++ ..+++++.+|+.+..+ .||+|++..++|.+++
T Consensus 68 ~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~l~~~~~ 147 (235)
T 3lcc_A 68 GRALVPGCGGGHDVVAMASPERFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWRPTELFDLIFDYVFFCAIEP 147 (235)
T ss_dssp EEEEEETCTTCHHHHHHCBTTEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCCCSSCEEEEEEESSTTTSCG
T ss_pred CCEEEeCCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCCCCCCeeEEEEChhhhcCCH
Confidence 5999999999 6776 666766653 3579999999998434 4999999999999998
Q ss_pred HHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCC--CCCCCCHHHHHHHHHhCCCcEEEEEecC
Q 043585 219 EDSLKILKKCREAIAGNGQRGKVLIMDIVINEKE--DEDQRTDKEWKTLFLDAGFTCCKITTMF 280 (287)
Q Consensus 219 ~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~--~~~~rt~~e~~~ll~~aGf~~~~~~~~~ 280 (287)
++...+|+++++.|+| ||++++++....... .+..++.++|.++|+++||+++++...+
T Consensus 148 ~~~~~~l~~~~~~Lkp---gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~ 208 (235)
T 3lcc_A 148 EMRPAWAKSMYELLKP---DGELITLMYPITDHVGGPPYKVDVSTFEEVLVPIGFKAVSVEENP 208 (235)
T ss_dssp GGHHHHHHHHHHHEEE---EEEEEEEECCCSCCCSCSSCCCCHHHHHHHHGGGTEEEEEEEECT
T ss_pred HHHHHHHHHHHHHCCC---CcEEEEEEecccccCCCCCccCCHHHHHHHHHHcCCeEEEEEecC
Confidence 8899999999999999 999999887654332 2255789999999999999999988764
No 27
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.35 E-value=4.1e-12 Score=114.26 Aligned_cols=114 Identities=11% Similarity=0.108 Sum_probs=94.6
Q ss_pred ccCcceEEEecCcc----------------cccc-hhhhhcCCC-------CCCceeeeccCcc-cCC--CCCeEEeccc
Q 043585 160 IERLGSMVDVGGGN----------------VLDL-PHAVANTPQ-------TENLKYVADDMFQ-FIP--PADAYFFMLF 212 (287)
Q Consensus 160 ~~~~~~vlDvGgG~----------------v~Dl-p~vi~~a~~-------~~Ri~~~~gd~~~-~~p--~~D~~~l~~v 212 (287)
.....+|||||||. .+|+ |..++.+++ .++++++.+|+.+ +++ .+|+|++..+
T Consensus 115 ~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~ 194 (312)
T 3vc1_A 115 AGPDDTLVDAGCGRGGSMVMAHRRFGSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTPFDKGAVTASWNNES 194 (312)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEEEEEESC
T ss_pred CCCCCEEEEecCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCCCCCCCEeEEEECCc
Confidence 56778999999999 5666 666666653 4689999999988 555 4999999999
Q ss_pred cccCChHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCCC--------------CCCCHHHHHHHHHhCCCcEEEEEe
Q 043585 213 FHAFGGEDSLKILKKCREAIAGNGQRGKVLIMDIVINEKEDE--------------DQRTDKEWKTLFLDAGFTCCKITT 278 (287)
Q Consensus 213 lh~~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~--------------~~rt~~e~~~ll~~aGf~~~~~~~ 278 (287)
+|+++ ...+|+++++.|+| ||++++.+......... ..++.++|.++|+++||+++++..
T Consensus 195 l~~~~---~~~~l~~~~~~Lkp---gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~aGf~~~~~~~ 268 (312)
T 3vc1_A 195 TMYVD---LHDLFSEHSRFLKV---GGRYVTITGCWNPRYGQPSKWVSQINAHFECNIHSRREYLRAMADNRLVPHTIVD 268 (312)
T ss_dssp GGGSC---HHHHHHHHHHHEEE---EEEEEEEEEEECTTTCSCCHHHHHHHHHHTCCCCBHHHHHHHHHTTTEEEEEEEE
T ss_pred hhhCC---HHHHHHHHHHHcCC---CcEEEEEEccccccccchhHHHHHHHhhhcCCCCCHHHHHHHHHHCCCEEEEEEe
Confidence 99995 67899999999999 99999999877654321 456899999999999999998887
Q ss_pred c
Q 043585 279 M 279 (287)
Q Consensus 279 ~ 279 (287)
.
T Consensus 269 ~ 269 (312)
T 3vc1_A 269 L 269 (312)
T ss_dssp C
T ss_pred C
Confidence 5
No 28
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.35 E-value=4.1e-12 Score=107.77 Aligned_cols=122 Identities=19% Similarity=0.294 Sum_probs=97.7
Q ss_pred hhhcccccccCcceEEEecCcc------------------cccc-hhhhhcCCC------CCCceeeeccCcc-cCC--C
Q 043585 152 VKDCCRTLIERLGSMVDVGGGN------------------VLDL-PHAVANTPQ------TENLKYVADDMFQ-FIP--P 203 (287)
Q Consensus 152 ~~~~~~~~~~~~~~vlDvGgG~------------------v~Dl-p~vi~~a~~------~~Ri~~~~gd~~~-~~p--~ 203 (287)
++.+ ......+|||||||. .+|. +.+++.+++ .++++++.+|+.+ +++ .
T Consensus 30 ~~~~---~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 106 (219)
T 3dh0_A 30 LKEF---GLKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKIPLPDNT 106 (219)
T ss_dssp HHHH---TCCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTBCSSCSSC
T ss_pred HHHh---CCCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEecccccCCCCCCC
Confidence 4445 456678999999999 4554 556666543 3589999999988 555 3
Q ss_pred CCeEEeccccccCChHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCCC----CCCCHHHHHHHHHhCCCcEEEEEec
Q 043585 204 ADAYFFMLFFHAFGGEDSLKILKKCREAIAGNGQRGKVLIMDIVINEKEDE----DQRTDKEWKTLFLDAGFTCCKITTM 279 (287)
Q Consensus 204 ~D~~~l~~vlh~~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~----~~rt~~e~~~ll~~aGf~~~~~~~~ 279 (287)
+|+|++..++|++++. ..+|+++++.|+| ||++++.+......... ..++.++|.++++++||+++++...
T Consensus 107 fD~v~~~~~l~~~~~~--~~~l~~~~~~Lkp---gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 181 (219)
T 3dh0_A 107 VDFIFMAFTFHELSEP--LKFLEELKRVAKP---FAYLAIIDWKKEERDKGPPPEEVYSEWEVGLILEDAGIRVGRVVEV 181 (219)
T ss_dssp EEEEEEESCGGGCSSH--HHHHHHHHHHEEE---EEEEEEEEECSSCCSSSCCGGGSCCHHHHHHHHHHTTCEEEEEEEE
T ss_pred eeEEEeehhhhhcCCH--HHHHHHHHHHhCC---CeEEEEEEecccccccCCchhcccCHHHHHHHHHHCCCEEEEEEee
Confidence 9999999999999764 6899999999999 99999998776544321 5678999999999999999998877
Q ss_pred CC
Q 043585 280 FG 281 (287)
Q Consensus 280 ~~ 281 (287)
.+
T Consensus 182 ~~ 183 (219)
T 3dh0_A 182 GK 183 (219)
T ss_dssp TT
T ss_pred CC
Confidence 54
No 29
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.33 E-value=1.5e-12 Score=110.05 Aligned_cols=117 Identities=12% Similarity=0.113 Sum_probs=93.2
Q ss_pred ccCcceEEEecCcc---------------cccc-hhhhhcCCCCCCceeeeccCcc-cCC-CCCeEEeccccccCChHHH
Q 043585 160 IERLGSMVDVGGGN---------------VLDL-PHAVANTPQTENLKYVADDMFQ-FIP-PADAYFFMLFFHAFGGEDS 221 (287)
Q Consensus 160 ~~~~~~vlDvGgG~---------------v~Dl-p~vi~~a~~~~Ri~~~~gd~~~-~~p-~~D~~~l~~vlh~~~d~~~ 221 (287)
+....+|||||||. .+|. |.+++.+++.-++++..+|+.. +.+ .+|+|++..+||++++++.
T Consensus 41 ~~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~l~~~~~~~~ 120 (211)
T 3e23_A 41 LPAGAKILELGCGAGYQAEAMLAAGFDVDATDGSPELAAEASRRLGRPVRTMLFHQLDAIDAYDAVWAHACLLHVPRDEL 120 (211)
T ss_dssp SCTTCEEEESSCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTSCCEECCGGGCCCCSCEEEEEECSCGGGSCHHHH
T ss_pred cCCCCcEEEECCCCCHHHHHHHHcCCeEEEECCCHHHHHHHHHhcCCceEEeeeccCCCCCcEEEEEecCchhhcCHHHH
Confidence 45568999999999 5665 6666666554478899999887 422 4999999999999999899
Q ss_pred HHHHHHHHHHhcCCCCCcEEEEEeeccCCCCCC------CCCCHHHHHHHHHhCC-CcEEEEEec
Q 043585 222 LKILKKCREAIAGNGQRGKVLIMDIVINEKEDE------DQRTDKEWKTLFLDAG-FTCCKITTM 279 (287)
Q Consensus 222 ~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~------~~rt~~e~~~ll~~aG-f~~~~~~~~ 279 (287)
..+|+++++.|+| ||++++........... ..++.++|.++|+++| |+++++...
T Consensus 121 ~~~l~~~~~~Lkp---gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG~f~~~~~~~~ 182 (211)
T 3e23_A 121 ADVLKLIWRALKP---GGLFYASYKSGEGEGRDKLARYYNYPSEEWLRARYAEAGTWASVAVESS 182 (211)
T ss_dssp HHHHHHHHHHEEE---EEEEEEEEECCSSCEECTTSCEECCCCHHHHHHHHHHHCCCSEEEEEEE
T ss_pred HHHHHHHHHhcCC---CcEEEEEEcCCCcccccccchhccCCCHHHHHHHHHhCCCcEEEEEEec
Confidence 9999999999999 99998875443322111 5579999999999999 999888765
No 30
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.32 E-value=2.5e-12 Score=111.11 Aligned_cols=117 Identities=13% Similarity=0.214 Sum_probs=94.5
Q ss_pred CcceEEEecCcc----------------cccc-hhhhhcCCC------CCCceeeeccCcc-cCC--CCCeEEecccccc
Q 043585 162 RLGSMVDVGGGN----------------VLDL-PHAVANTPQ------TENLKYVADDMFQ-FIP--PADAYFFMLFFHA 215 (287)
Q Consensus 162 ~~~~vlDvGgG~----------------v~Dl-p~vi~~a~~------~~Ri~~~~gd~~~-~~p--~~D~~~l~~vlh~ 215 (287)
...+|||||||. .+|. |.+++.+++ ..+++++.+|+.+ +.+ .+|+|++..++|+
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 158 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTPEPDSYDVIWIQWVIGH 158 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCCCCSSCEEEEEEESCGGG
T ss_pred CCCEEEEECCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhcCCCCCCEEEEEEcchhhh
Confidence 468999999999 4554 566666553 2368999999877 444 4999999999999
Q ss_pred CChHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCC------CCCCCCCHHHHHHHHHhCCCcEEEEEecCC
Q 043585 216 FGGEDSLKILKKCREAIAGNGQRGKVLIMDIVINEK------EDEDQRTDKEWKTLFLDAGFTCCKITTMFG 281 (287)
Q Consensus 216 ~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~------~~~~~rt~~e~~~ll~~aGf~~~~~~~~~~ 281 (287)
+++++...+|+++++.|+| ||++++.+...+.. .....++.++|.++|+++||+++++....+
T Consensus 159 ~~~~~~~~~l~~~~~~Lkp---gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~~ 227 (241)
T 2ex4_A 159 LTDQHLAEFLRRCKGSLRP---NGIIVIKDNMAQEGVILDDVDSSVCRDLDVVRRIICSAGLSLLAEERQEN 227 (241)
T ss_dssp SCHHHHHHHHHHHHHHEEE---EEEEEEEEEEBSSSEEEETTTTEEEEBHHHHHHHHHHTTCCEEEEEECCS
T ss_pred CCHHHHHHHHHHHHHhcCC---CeEEEEEEccCCCcceecccCCcccCCHHHHHHHHHHcCCeEEEeeecCC
Confidence 9999888999999999999 99999998876531 111456899999999999999999887644
No 31
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.31 E-value=2.6e-12 Score=112.23 Aligned_cols=116 Identities=16% Similarity=0.296 Sum_probs=93.0
Q ss_pred cccCcceEEEecCcc---------------cccc-hhhhhcCCC------CCCceeeeccCcc-cCC--CCCeEEecccc
Q 043585 159 LIERLGSMVDVGGGN---------------VLDL-PHAVANTPQ------TENLKYVADDMFQ-FIP--PADAYFFMLFF 213 (287)
Q Consensus 159 ~~~~~~~vlDvGgG~---------------v~Dl-p~vi~~a~~------~~Ri~~~~gd~~~-~~p--~~D~~~l~~vl 213 (287)
......+|||||||. .+|+ |.+++.+++ .++++++.+|+.+ ++| .+|+|++..++
T Consensus 34 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~fD~V~~~~~l 113 (260)
T 1vl5_A 34 ALKGNEEVLDVATGGGHVANAFAPFVKKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMPFTDERFHIVTCRIAA 113 (260)
T ss_dssp TCCSCCEEEEETCTTCHHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCCSCTTCEEEEEEESCG
T ss_pred CCCCCCEEEEEeCCCCHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHHhCCCCCCCEEEEEEhhhh
Confidence 345678999999998 5665 667766653 3679999999988 666 49999999999
Q ss_pred ccCChHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCC----------------CCCCCCHHHHHHHHHhCCCcEEEEE
Q 043585 214 HAFGGEDSLKILKKCREAIAGNGQRGKVLIMDIVINEKE----------------DEDQRTDKEWKTLFLDAGFTCCKIT 277 (287)
Q Consensus 214 h~~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~----------------~~~~rt~~e~~~ll~~aGf~~~~~~ 277 (287)
|+++|. ..+|++++++|+| ||++++.+...++.. ....++.++|.++|+++||+++.+.
T Consensus 114 ~~~~d~--~~~l~~~~r~Lkp---gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~ 188 (260)
T 1vl5_A 114 HHFPNP--ASFVSEAYRVLKK---GGQLLLVDNSAPENDAFDVFYNYVEKERDYSHHRAWKKSDWLKMLEEAGFELEELH 188 (260)
T ss_dssp GGCSCH--HHHHHHHHHHEEE---EEEEEEEEEEBCSSHHHHHHHHHHHHHHCTTCCCCCBHHHHHHHHHHHTCEEEEEE
T ss_pred HhcCCH--HHHHHHHHHHcCC---CCEEEEEEcCCCCCHHHHHHHHHHHHhcCccccCCCCHHHHHHHHHHCCCeEEEEE
Confidence 999876 4899999999999 999999987765431 1155789999999999999987766
Q ss_pred ec
Q 043585 278 TM 279 (287)
Q Consensus 278 ~~ 279 (287)
..
T Consensus 189 ~~ 190 (260)
T 1vl5_A 189 CF 190 (260)
T ss_dssp EE
T ss_pred Ee
Confidence 54
No 32
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.31 E-value=1.1e-11 Score=106.97 Aligned_cols=116 Identities=16% Similarity=0.216 Sum_probs=92.3
Q ss_pred ccCcceEEEecCcc---------------cccc-hhhhhcCCCCCCceeeeccCcc---cCC--CCCeEEeccccccCCh
Q 043585 160 IERLGSMVDVGGGN---------------VLDL-PHAVANTPQTENLKYVADDMFQ---FIP--PADAYFFMLFFHAFGG 218 (287)
Q Consensus 160 ~~~~~~vlDvGgG~---------------v~Dl-p~vi~~a~~~~Ri~~~~gd~~~---~~p--~~D~~~l~~vlh~~~d 218 (287)
+.+..+|||||||. .+|+ +..++.+++. ++++.+|+.+ +++ .+|+|++..++|++++
T Consensus 39 ~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~--~~~~~~d~~~~~~~~~~~~fD~i~~~~~l~~~~~ 116 (240)
T 3dli_A 39 FKGCRRVLDIGCGRGEFLELCKEEGIESIGVDINEDMIKFCEGK--FNVVKSDAIEYLKSLPDKYLDGVMISHFVEHLDP 116 (240)
T ss_dssp TTTCSCEEEETCTTTHHHHHHHHHTCCEEEECSCHHHHHHHHTT--SEEECSCHHHHHHTSCTTCBSEEEEESCGGGSCG
T ss_pred hcCCCeEEEEeCCCCHHHHHHHhCCCcEEEEECCHHHHHHHHhh--cceeeccHHHHhhhcCCCCeeEEEECCchhhCCc
Confidence 45678999999999 4565 5556555544 8999999877 445 4999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCC----------CCCCCCCHHHHHHHHHhCCCcEEEEEecC
Q 043585 219 EDSLKILKKCREAIAGNGQRGKVLIMDIVINEK----------EDEDQRTDKEWKTLFLDAGFTCCKITTMF 280 (287)
Q Consensus 219 ~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~----------~~~~~rt~~e~~~ll~~aGf~~~~~~~~~ 280 (287)
++...+|+++++.|+| ||++++........ ......+.+++.++++++||+++++....
T Consensus 117 ~~~~~~l~~~~~~Lkp---gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~~~~~~~~ 185 (240)
T 3dli_A 117 ERLFELLSLCYSKMKY---SSYIVIESPNPTSLYSLINFYIDPTHKKPVHPETLKFILEYLGFRDVKIEFFE 185 (240)
T ss_dssp GGHHHHHHHHHHHBCT---TCCEEEEEECTTSHHHHHHHTTSTTCCSCCCHHHHHHHHHHHTCEEEEEEEEC
T ss_pred HHHHHHHHHHHHHcCC---CcEEEEEeCCcchhHHHHHHhcCccccccCCHHHHHHHHHHCCCeEEEEEEec
Confidence 8889999999999999 99999876543221 11155789999999999999998887653
No 33
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.30 E-value=3.5e-12 Score=110.23 Aligned_cols=120 Identities=18% Similarity=0.278 Sum_probs=95.9
Q ss_pred hhhcccccccCcceEEEecCcc---------------cccc-hhhhhcCCC------CCCceeeeccCcc-cCC--CCCe
Q 043585 152 VKDCCRTLIERLGSMVDVGGGN---------------VLDL-PHAVANTPQ------TENLKYVADDMFQ-FIP--PADA 206 (287)
Q Consensus 152 ~~~~~~~~~~~~~~vlDvGgG~---------------v~Dl-p~vi~~a~~------~~Ri~~~~gd~~~-~~p--~~D~ 206 (287)
++.. ......+|||||||. .+|. |.+++.+++ .++++++.+|+.+ +++ .+|+
T Consensus 14 ~~~~---~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 90 (239)
T 1xxl_A 14 IKTA---ECRAEHRVLDIGAGAGHTALAFSPYVQECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLPFPDDSFDI 90 (239)
T ss_dssp HHHH---TCCTTCEEEEESCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCCSCTTCEEE
T ss_pred HHHh---CcCCCCEEEEEccCcCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccccCCCCCCcEEE
Confidence 5555 567788999999998 5665 566666553 3689999999987 555 3999
Q ss_pred EEeccccccCChHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCC----------------CCCCCCHHHHHHHHHhCC
Q 043585 207 YFFMLFFHAFGGEDSLKILKKCREAIAGNGQRGKVLIMDIVINEKE----------------DEDQRTDKEWKTLFLDAG 270 (287)
Q Consensus 207 ~~l~~vlh~~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~----------------~~~~rt~~e~~~ll~~aG 270 (287)
|++..++|+|++. ..+|+++++.|+| ||++++.+...++.. ....++.++|.++|+++|
T Consensus 91 v~~~~~l~~~~~~--~~~l~~~~~~Lkp---gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aG 165 (239)
T 1xxl_A 91 ITCRYAAHHFSDV--RKAVREVARVLKQ---DGRFLLVDHYAPEDPVLDEFVNHLNRLRDPSHVRESSLSEWQAMFSANQ 165 (239)
T ss_dssp EEEESCGGGCSCH--HHHHHHHHHHEEE---EEEEEEEEECBCSSHHHHHHHHHHHHHHCTTCCCCCBHHHHHHHHHHTT
T ss_pred EEECCchhhccCH--HHHHHHHHHHcCC---CcEEEEEEcCCCCChhHHHHHHHHHHhccccccCCCCHHHHHHHHHHCC
Confidence 9999999999875 5899999999999 999999988765431 015678999999999999
Q ss_pred CcEEEEEec
Q 043585 271 FTCCKITTM 279 (287)
Q Consensus 271 f~~~~~~~~ 279 (287)
|+++++...
T Consensus 166 f~~~~~~~~ 174 (239)
T 1xxl_A 166 LAYQDIQKW 174 (239)
T ss_dssp EEEEEEEEE
T ss_pred CcEEEEEee
Confidence 998877654
No 34
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.30 E-value=6.1e-12 Score=111.95 Aligned_cols=115 Identities=17% Similarity=0.291 Sum_probs=94.1
Q ss_pred ccCcceEEEecCcc----------------cccc-hhhhhcCCC-------CCCceeeeccCcc-cCC--CCCeEEeccc
Q 043585 160 IERLGSMVDVGGGN----------------VLDL-PHAVANTPQ-------TENLKYVADDMFQ-FIP--PADAYFFMLF 212 (287)
Q Consensus 160 ~~~~~~vlDvGgG~----------------v~Dl-p~vi~~a~~-------~~Ri~~~~gd~~~-~~p--~~D~~~l~~v 212 (287)
.....+|||||||. .+|+ |..++.+++ .++++++.+|+.+ +++ .+|+|++..+
T Consensus 80 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 159 (297)
T 2o57_A 80 LQRQAKGLDLGAGYGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIPCEDNSYDFIWSQDA 159 (297)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCSSCTTCEEEEEEESC
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccCCCCCCCEeEEEecch
Confidence 35667999999998 5565 556666543 4789999999988 665 4999999999
Q ss_pred cccCChHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCCC-------------CCCCHHHHHHHHHhCCCcEEEEEec
Q 043585 213 FHAFGGEDSLKILKKCREAIAGNGQRGKVLIMDIVINEKEDE-------------DQRTDKEWKTLFLDAGFTCCKITTM 279 (287)
Q Consensus 213 lh~~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~-------------~~rt~~e~~~ll~~aGf~~~~~~~~ 279 (287)
+|++++ ...+|+++++.|+| ||++++.+......... ...+.++|.++|+++||+++++...
T Consensus 160 l~~~~~--~~~~l~~~~~~Lkp---gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~ 234 (297)
T 2o57_A 160 FLHSPD--KLKVFQECARVLKP---RGVMAITDPMKEDGIDKSSIQPILDRIKLHDMGSLGLYRSLAKECGLVTLRTFSR 234 (297)
T ss_dssp GGGCSC--HHHHHHHHHHHEEE---EEEEEEEEEEECTTCCGGGGHHHHHHHTCSSCCCHHHHHHHHHHTTEEEEEEEEC
T ss_pred hhhcCC--HHHHHHHHHHHcCC---CeEEEEEEeccCCCCchHHHHHHHHHhcCCCCCCHHHHHHHHHHCCCeEEEEEEC
Confidence 999988 47899999999999 99999999876543321 3458999999999999999988765
No 35
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.29 E-value=1.8e-12 Score=109.42 Aligned_cols=113 Identities=17% Similarity=0.209 Sum_probs=89.5
Q ss_pred ceEEEecCcc----------------cccc-hhhhhcCCC-------CCCceeeeccCcc-cCC--CCCeEEeccccccC
Q 043585 164 GSMVDVGGGN----------------VLDL-PHAVANTPQ-------TENLKYVADDMFQ-FIP--PADAYFFMLFFHAF 216 (287)
Q Consensus 164 ~~vlDvGgG~----------------v~Dl-p~vi~~a~~-------~~Ri~~~~gd~~~-~~p--~~D~~~l~~vlh~~ 216 (287)
.+|||||||. .+|. |.+++.+++ .++++++.+|+.+ +++ .+|+|++..++|++
T Consensus 45 ~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~l~~~ 124 (219)
T 3dlc_A 45 GTCIDIGSGPGALSIALAKQSDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIPIEDNYADLIVSRGSVFFW 124 (219)
T ss_dssp EEEEEETCTTSHHHHHHHHHSEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCSSCTTCEEEEEEESCGGGC
T ss_pred CEEEEECCCCCHHHHHHHHcCCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCCCCcccccEEEECchHhhc
Confidence 3999999999 5666 666666653 4689999999998 665 49999999999999
Q ss_pred ChHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCCC---------------------CCCCHHHHHHHHHhCCCcEEE
Q 043585 217 GGEDSLKILKKCREAIAGNGQRGKVLIMDIVINEKEDE---------------------DQRTDKEWKTLFLDAGFTCCK 275 (287)
Q Consensus 217 ~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~---------------------~~rt~~e~~~ll~~aGf~~~~ 275 (287)
++. ..+|+++++.|+| ||++++.+...+..... ..++.++|.++|+++||+.++
T Consensus 125 ~~~--~~~l~~~~~~L~p---gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~ 199 (219)
T 3dlc_A 125 EDV--ATAFREIYRILKS---GGKTYIGGGFGNKELRDSISAEMIRKNPDWKEFNRKNISQENVERFQNVLDEIGISSYE 199 (219)
T ss_dssp SCH--HHHHHHHHHHEEE---EEEEEEEECCSSHHHHHHHHHHHHHHCTTHHHHHHHHSSHHHHHHHHHHHHHHTCSSEE
T ss_pred cCH--HHHHHHHHHhCCC---CCEEEEEeccCcHHHHHHHHHHHHHhHHHHHhhhhhccccCCHHHHHHHHHHcCCCeEE
Confidence 664 5899999999999 99999987543321100 334779999999999999998
Q ss_pred EEecCC
Q 043585 276 ITTMFG 281 (287)
Q Consensus 276 ~~~~~~ 281 (287)
+.....
T Consensus 200 ~~~~~~ 205 (219)
T 3dlc_A 200 IILGDE 205 (219)
T ss_dssp EEEETT
T ss_pred EEecCC
Confidence 887644
No 36
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.29 E-value=6.4e-12 Score=112.66 Aligned_cols=117 Identities=13% Similarity=0.086 Sum_probs=92.0
Q ss_pred ccCcceEEEecCcc------------------cccc-hhhhhcCCC-------CCCceeeeccCcc-cCC-CCCeEEecc
Q 043585 160 IERLGSMVDVGGGN------------------VLDL-PHAVANTPQ-------TENLKYVADDMFQ-FIP-PADAYFFML 211 (287)
Q Consensus 160 ~~~~~~vlDvGgG~------------------v~Dl-p~vi~~a~~-------~~Ri~~~~gd~~~-~~p-~~D~~~l~~ 211 (287)
.....+|||||||. .+|. |.+++.+++ .+|++++.+|+.+ +++ .||+|++..
T Consensus 116 l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~ 195 (305)
T 3ocj_A 116 LRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLDTREGYDLLTSNG 195 (305)
T ss_dssp CCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCCCSCEEEEECCS
T ss_pred CCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCCccCCeEEEEECC
Confidence 45678999999999 4555 566665542 4569999999998 444 499999999
Q ss_pred ccccCC-hHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCCC------------------------------CCCCHH
Q 043585 212 FFHAFG-GEDSLKILKKCREAIAGNGQRGKVLIMDIVINEKEDE------------------------------DQRTDK 260 (287)
Q Consensus 212 vlh~~~-d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~------------------------------~~rt~~ 260 (287)
++|+++ ++.+.++|+++++.|+| ||++++.+...+..... ..++.+
T Consensus 196 ~~~~~~~~~~~~~~l~~~~~~Lkp---gG~l~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (305)
T 3ocj_A 196 LNIYEPDDARVTELYRRFWQALKP---GGALVTSFLTPPPALSPDSPWDMQAIDPHDLQLQQLVFTRLIQPRWNALRTHA 272 (305)
T ss_dssp SGGGCCCHHHHHHHHHHHHHHEEE---EEEEEEECCCCCTTTCTTCCCCGGGSCHHHHHHHHHHHHHTTCCSCCCCCCHH
T ss_pred hhhhcCCHHHHHHHHHHHHHhcCC---CeEEEEEecCCCCcccccccceeeccccchhhhhhhHHHHHHhhhhhccCCHH
Confidence 999985 55556799999999999 99999988655432211 226899
Q ss_pred HHHHHHHhCCCcEEEEEec
Q 043585 261 EWKTLFLDAGFTCCKITTM 279 (287)
Q Consensus 261 e~~~ll~~aGf~~~~~~~~ 279 (287)
++.++|+++||+++++...
T Consensus 273 ~~~~~l~~aGF~~v~~~~~ 291 (305)
T 3ocj_A 273 QTRAQLEEAGFTDLRFEDD 291 (305)
T ss_dssp HHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHHHCCCEEEEEEcc
Confidence 9999999999999998865
No 37
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.29 E-value=5.7e-12 Score=111.77 Aligned_cols=110 Identities=17% Similarity=0.273 Sum_probs=89.4
Q ss_pred cCcceEEEecCcc--------------------cccc-hhhhhcCCC----CCCceeeeccCccc------------CC-
Q 043585 161 ERLGSMVDVGGGN--------------------VLDL-PHAVANTPQ----TENLKYVADDMFQF------------IP- 202 (287)
Q Consensus 161 ~~~~~vlDvGgG~--------------------v~Dl-p~vi~~a~~----~~Ri~~~~gd~~~~------------~p- 202 (287)
.+..+|||||||. .+|+ |.+++.+++ .+|++++.+|+.++ ++
T Consensus 76 ~~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~d~ 155 (274)
T 2qe6_A 76 AGISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAKDPNTAVFTADVRDPEYILNHPDVRRMIDF 155 (274)
T ss_dssp TCCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTTCTTEEEEECCTTCHHHHHHSHHHHHHCCT
T ss_pred cCCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCCCCCeEEEEeeCCCchhhhccchhhccCCC
Confidence 3568999999997 4677 778887764 57899999999762 22
Q ss_pred -CCCeEEeccccccCChHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCC--------------CCCCCCHHHHHHHHH
Q 043585 203 -PADAYFFMLFFHAFGGEDSLKILKKCREAIAGNGQRGKVLIMDIVINEKE--------------DEDQRTDKEWKTLFL 267 (287)
Q Consensus 203 -~~D~~~l~~vlh~~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~--------------~~~~rt~~e~~~ll~ 267 (287)
.+|+|++..+||++++++...+|++++++|+| ||+|++.+...+... ....||.+|+.++|
T Consensus 156 ~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~p---GG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ei~~~l- 231 (274)
T 2qe6_A 156 SRPAAIMLVGMLHYLSPDVVDRVVGAYRDALAP---GSYLFMTSLVDTGLPAQQKLARITRENLGEGWARTPEEIERQF- 231 (274)
T ss_dssp TSCCEEEETTTGGGSCTTTHHHHHHHHHHHSCT---TCEEEEEEEBCSSCHHHHHHHHHHHHHHSCCCCBCHHHHHHTT-
T ss_pred CCCEEEEEechhhhCCcHHHHHHHHHHHHhCCC---CcEEEEEEecCcchHHHHHHHHHHHhcCCCCccCCHHHHHHHh-
Confidence 58999999999999998899999999999999 999999987753200 01568999999999
Q ss_pred hCCCcEEE
Q 043585 268 DAGFTCCK 275 (287)
Q Consensus 268 ~aGf~~~~ 275 (287)
+||++++
T Consensus 232 -~G~~l~~ 238 (274)
T 2qe6_A 232 -GDFELVE 238 (274)
T ss_dssp -TTCEECT
T ss_pred -CCCeEcc
Confidence 5998764
No 38
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.29 E-value=5.3e-12 Score=112.74 Aligned_cols=116 Identities=15% Similarity=0.179 Sum_probs=91.7
Q ss_pred CcceEEEecCcc---------------cccc-hhhhhcCCC-----C----CCceeeeccCcc-cCC-CCCeEEec-ccc
Q 043585 162 RLGSMVDVGGGN---------------VLDL-PHAVANTPQ-----T----ENLKYVADDMFQ-FIP-PADAYFFM-LFF 213 (287)
Q Consensus 162 ~~~~vlDvGgG~---------------v~Dl-p~vi~~a~~-----~----~Ri~~~~gd~~~-~~p-~~D~~~l~-~vl 213 (287)
...+|||||||. .+|+ |.+++.+++ . .+++++.+|+.+ +.+ .||+|++. .++
T Consensus 82 ~~~~vLDlGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~~~ 161 (299)
T 3g2m_A 82 VSGPVLELAAGMGRLTFPFLDLGWEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFALDKRFGTVVISSGSI 161 (299)
T ss_dssp CCSCEEEETCTTTTTHHHHHTTTCCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCCCSCCEEEEEECHHHH
T ss_pred CCCcEEEEeccCCHHHHHHHHcCCeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCCcCCCcCEEEECCccc
Confidence 345999999999 5676 667777664 1 789999999998 555 49988854 788
Q ss_pred ccCChHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCC----CC------------------------------------
Q 043585 214 HAFGGEDSLKILKKCREAIAGNGQRGKVLIMDIVINEK----ED------------------------------------ 253 (287)
Q Consensus 214 h~~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~----~~------------------------------------ 253 (287)
|.+++++..++|+++++.|+| ||+|++.....+.. ..
T Consensus 162 ~~~~~~~~~~~l~~~~~~L~p---gG~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (299)
T 3g2m_A 162 NELDEADRRGLYASVREHLEP---GGKFLLSLAMSEAAESEPLERKQELPGRSGRRYVLHVRHLPAEEIQEITIHPADET 238 (299)
T ss_dssp TTSCHHHHHHHHHHHHHHEEE---EEEEEEEEECCHHHHSCCCCC-------------CCEEEEEEEEEEEEEEEESCC-
T ss_pred ccCCHHHHHHHHHHHHHHcCC---CcEEEEEeecCccccccchhccceeecCCCcEEEEEEEEeccccEEEEEEEeccCC
Confidence 888988899999999999999 99998866543210 00
Q ss_pred --C--------CCCCHHHHHHHHHhCCCcEEEEEecC
Q 043585 254 --E--------DQRTDKEWKTLFLDAGFTCCKITTMF 280 (287)
Q Consensus 254 --~--------~~rt~~e~~~ll~~aGf~~~~~~~~~ 280 (287)
. +.+|.+||.++|++|||+++++.+..
T Consensus 239 ~~~~~~~~~~~~~~t~~el~~ll~~aGF~v~~~~~~~ 275 (299)
T 3g2m_A 239 TDPFVVCTHRRRLLAPDQVVRELVRSGFDVIAQTPFA 275 (299)
T ss_dssp -CCCCEEEEEEEEECHHHHHHHHHHTTCEEEEEEEEC
T ss_pred CCcEEEEEEEEEEeCHHHHHHHHHHCCCEEEEEEecC
Confidence 0 24599999999999999999998875
No 39
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.28 E-value=8.8e-12 Score=109.38 Aligned_cols=120 Identities=14% Similarity=0.171 Sum_probs=96.1
Q ss_pred hhhcccccccCcceEEEecCcc----------------cccc-hhhhhcCCC-------CCCceeeeccCcc-cCC--CC
Q 043585 152 VKDCCRTLIERLGSMVDVGGGN----------------VLDL-PHAVANTPQ-------TENLKYVADDMFQ-FIP--PA 204 (287)
Q Consensus 152 ~~~~~~~~~~~~~~vlDvGgG~----------------v~Dl-p~vi~~a~~-------~~Ri~~~~gd~~~-~~p--~~ 204 (287)
++.+ ......+|||||||. .+|+ +..++.+++ .+|++++.+|+.+ +++ .+
T Consensus 54 ~~~~---~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~f 130 (273)
T 3bus_A 54 IALL---DVRSGDRVLDVGCGIGKPAVRLATARDVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLPFEDASF 130 (273)
T ss_dssp HHHS---CCCTTCEEEEESCTTSHHHHHHHHHSCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSCTTCE
T ss_pred HHhc---CCCCCCEEEEeCCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCCCCCCCc
Confidence 4445 456678999999998 4565 556665542 4689999999988 565 49
Q ss_pred CeEEeccccccCChHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCC----------------CCCCCHHHHHHHHHh
Q 043585 205 DAYFFMLFFHAFGGEDSLKILKKCREAIAGNGQRGKVLIMDIVINEKED----------------EDQRTDKEWKTLFLD 268 (287)
Q Consensus 205 D~~~l~~vlh~~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~----------------~~~rt~~e~~~ll~~ 268 (287)
|+|++..++|++++. ..+|+++++.|+| ||++++.+........ ...++.++|.+++++
T Consensus 131 D~v~~~~~l~~~~~~--~~~l~~~~~~L~p---gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 205 (273)
T 3bus_A 131 DAVWALESLHHMPDR--GRALREMARVLRP---GGTVAIADFVLLAPVEGAKKEAVDAFRAGGGVLSLGGIDEYESDVRQ 205 (273)
T ss_dssp EEEEEESCTTTSSCH--HHHHHHHHTTEEE---EEEEEEEEEEESSCCCHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHH
T ss_pred cEEEEechhhhCCCH--HHHHHHHHHHcCC---CeEEEEEEeeccCCCChhHHHHHHHHHhhcCccCCCCHHHHHHHHHH
Confidence 999999999999776 5899999999999 9999999987654321 155789999999999
Q ss_pred CCCcEEEEEec
Q 043585 269 AGFTCCKITTM 279 (287)
Q Consensus 269 aGf~~~~~~~~ 279 (287)
+||+++++...
T Consensus 206 aGf~~~~~~~~ 216 (273)
T 3bus_A 206 AELVVTSTVDI 216 (273)
T ss_dssp TTCEEEEEEEC
T ss_pred cCCeEEEEEEC
Confidence 99999988765
No 40
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.27 E-value=1.3e-11 Score=109.36 Aligned_cols=118 Identities=18% Similarity=0.195 Sum_probs=94.6
Q ss_pred cccCcceEEEecCcc----------------cccc-hhhhhcCCC-------CCCceeeeccCcccCCCCCeEEeccccc
Q 043585 159 LIERLGSMVDVGGGN----------------VLDL-PHAVANTPQ-------TENLKYVADDMFQFIPPADAYFFMLFFH 214 (287)
Q Consensus 159 ~~~~~~~vlDvGgG~----------------v~Dl-p~vi~~a~~-------~~Ri~~~~gd~~~~~p~~D~~~l~~vlh 214 (287)
......+|||||||. .+|+ |..++.+++ .++++++.+|+.+....+|+|++..++|
T Consensus 61 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~fD~v~~~~~l~ 140 (287)
T 1kpg_A 61 GLQPGMTLLDVGCGWGATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFDEPVDRIVSIGAFE 140 (287)
T ss_dssp TCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCCCCCSEEEEESCGG
T ss_pred CCCCcCEEEEECCcccHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhCCCCeeEEEEeCchh
Confidence 455678999999998 4565 566665543 3689999999966213599999999999
Q ss_pred cCChHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCC--------------------------CCCCCHHHHHHHHHh
Q 043585 215 AFGGEDSLKILKKCREAIAGNGQRGKVLIMDIVINEKED--------------------------EDQRTDKEWKTLFLD 268 (287)
Q Consensus 215 ~~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~--------------------------~~~rt~~e~~~ll~~ 268 (287)
++++++...+|+++++.|+| ||++++.+...+.... ...+|.+++.+++++
T Consensus 141 ~~~~~~~~~~l~~~~~~Lkp---gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~ 217 (287)
T 1kpg_A 141 HFGHERYDAFFSLAHRLLPA---DGVMLLHTITGLHPKEIHERGLPMSFTFARFLKFIVTEIFPGGRLPSIPMVQECASA 217 (287)
T ss_dssp GTCTTTHHHHHHHHHHHSCT---TCEEEEEEEEECCHHHHTTTTCSCHHHHHHHHHHHHHHTSTTCCCCCHHHHHHHHHT
T ss_pred hcChHHHHHHHHHHHHhcCC---CCEEEEEEecCCCccccccccccccccccchhhhHHheeCCCCCCCCHHHHHHHHHh
Confidence 99887788999999999999 9999999887643211 134689999999999
Q ss_pred CCCcEEEEEec
Q 043585 269 AGFTCCKITTM 279 (287)
Q Consensus 269 aGf~~~~~~~~ 279 (287)
+||+++++...
T Consensus 218 aGf~~~~~~~~ 228 (287)
T 1kpg_A 218 NGFTVTRVQSL 228 (287)
T ss_dssp TTCEEEEEEEC
T ss_pred CCcEEEEEEeC
Confidence 99999998765
No 41
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.27 E-value=1.1e-11 Score=107.72 Aligned_cols=114 Identities=17% Similarity=0.191 Sum_probs=89.2
Q ss_pred cCcceEEEecCcc----------------cccc-hhhhhcCCC---CCCceeeeccCcc-cCC--CCCeEEeccccccCC
Q 043585 161 ERLGSMVDVGGGN----------------VLDL-PHAVANTPQ---TENLKYVADDMFQ-FIP--PADAYFFMLFFHAFG 217 (287)
Q Consensus 161 ~~~~~vlDvGgG~----------------v~Dl-p~vi~~a~~---~~Ri~~~~gd~~~-~~p--~~D~~~l~~vlh~~~ 217 (287)
....+|||||||. .+|. |.+++.+++ ..+++++.+|+.+ +++ .+|+|++..++|+++
T Consensus 43 ~~~~~vLD~GcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~ 122 (253)
T 3g5l_A 43 FNQKTVLDLGCGFGWHCIYAAEHGAKKVLGIDLSERMLTEAKRKTTSPVVCYEQKAIEDIAIEPDAYNVVLSSLALHYIA 122 (253)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHCCCTTEEEEECCGGGCCCCTTCEEEEEEESCGGGCS
T ss_pred cCCCEEEEECCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHhhccCCeEEEEcchhhCCCCCCCeEEEEEchhhhhhh
Confidence 4678999999999 5665 666666654 5789999999987 554 499999999999996
Q ss_pred hHHHHHHHHHHHHHhcCCCCCcEEEEEeecc------------CCCCCC-------------------------CCCCHH
Q 043585 218 GEDSLKILKKCREAIAGNGQRGKVLIMDIVI------------NEKEDE-------------------------DQRTDK 260 (287)
Q Consensus 218 d~~~~~iL~~~~~al~~~~~~g~lli~e~~~------------~~~~~~-------------------------~~rt~~ 260 (287)
+ ..++|+++++.|+| ||++++..... .+.+.. ..||.+
T Consensus 123 ~--~~~~l~~~~~~Lkp---gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~ 197 (253)
T 3g5l_A 123 S--FDDICKKVYINLKS---SGSFIFSVEHPVFTADGRQDWYTDETGNKLHWPVDRYFNESMRTSHFLGEDVQKYHRTVT 197 (253)
T ss_dssp C--HHHHHHHHHHHEEE---EEEEEEEEECHHHHSSSSCSCEECSSCCEEEEEECCTTCCCEEEEEETTEEEEEECCCHH
T ss_pred h--HHHHHHHHHHHcCC---CcEEEEEeCCCccccCccccceeccCCceEEEEeccccccceEEEeeccccCccEecCHH
Confidence 6 46899999999999 99998863321 111110 234999
Q ss_pred HHHHHHHhCCCcEEEEEec
Q 043585 261 EWKTLFLDAGFTCCKITTM 279 (287)
Q Consensus 261 e~~~ll~~aGf~~~~~~~~ 279 (287)
+|.++|++|||+++++...
T Consensus 198 ~~~~~l~~aGF~~~~~~e~ 216 (253)
T 3g5l_A 198 TYIQTLLKNGFQINSVIEP 216 (253)
T ss_dssp HHHHHHHHTTEEEEEEECC
T ss_pred HHHHHHHHcCCeeeeeecC
Confidence 9999999999999998865
No 42
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.27 E-value=9.4e-12 Score=101.46 Aligned_cols=114 Identities=20% Similarity=0.331 Sum_probs=92.9
Q ss_pred cccCcceEEEecCcc---------------cccc-hhhhhcCCC-CCCceeeeccCcccCC--CCCeEEeccccccCChH
Q 043585 159 LIERLGSMVDVGGGN---------------VLDL-PHAVANTPQ-TENLKYVADDMFQFIP--PADAYFFMLFFHAFGGE 219 (287)
Q Consensus 159 ~~~~~~~vlDvGgG~---------------v~Dl-p~vi~~a~~-~~Ri~~~~gd~~~~~p--~~D~~~l~~vlh~~~d~ 219 (287)
......+|||||||. .+|. |..++.+++ .+++++..+| .+++ .+|+|++..++|++++.
T Consensus 14 ~~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~v~~~~~d--~~~~~~~~D~v~~~~~l~~~~~~ 91 (170)
T 3i9f_A 14 FEGKKGVIVDYGCGNGFYCKYLLEFATKLYCIDINVIALKEVKEKFDSVITLSDP--KEIPDNSVDFILFANSFHDMDDK 91 (170)
T ss_dssp HSSCCEEEEEETCTTCTTHHHHHTTEEEEEEECSCHHHHHHHHHHCTTSEEESSG--GGSCTTCEEEEEEESCSTTCSCH
T ss_pred CcCCCCeEEEECCCCCHHHHHHHhhcCeEEEEeCCHHHHHHHHHhCCCcEEEeCC--CCCCCCceEEEEEccchhcccCH
Confidence 456678999999999 5665 666666655 6799999999 4444 49999999999999764
Q ss_pred HHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCCC----CCCCHHHHHHHHHhCCCcEEEEEecCC
Q 043585 220 DSLKILKKCREAIAGNGQRGKVLIMDIVINEKEDE----DQRTDKEWKTLFLDAGFTCCKITTMFG 281 (287)
Q Consensus 220 ~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~----~~rt~~e~~~ll~~aGf~~~~~~~~~~ 281 (287)
..+|+++++.|+| ||++++.+......... ..++.++|.++|+ ||+++++.....
T Consensus 92 --~~~l~~~~~~L~p---gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--Gf~~~~~~~~~~ 150 (170)
T 3i9f_A 92 --QHVISEVKRILKD---DGRVIIIDWRKENTGIGPPLSIRMDEKDYMGWFS--NFVVEKRFNPTP 150 (170)
T ss_dssp --HHHHHHHHHHEEE---EEEEEEEEECSSCCSSSSCGGGCCCHHHHHHHTT--TEEEEEEECSST
T ss_pred --HHHHHHHHHhcCC---CCEEEEEEcCccccccCchHhhhcCHHHHHHHHh--CcEEEEccCCCC
Confidence 5899999999999 99999998876543321 5579999999999 999999988754
No 43
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.26 E-value=1.1e-11 Score=106.49 Aligned_cols=115 Identities=16% Similarity=0.244 Sum_probs=92.1
Q ss_pred ccCcceEEEecCcc---------------cccc-hhhhhcCCC---CCCceeeeccCcc-cCC--CCCeEEeccccccCC
Q 043585 160 IERLGSMVDVGGGN---------------VLDL-PHAVANTPQ---TENLKYVADDMFQ-FIP--PADAYFFMLFFHAFG 217 (287)
Q Consensus 160 ~~~~~~vlDvGgG~---------------v~Dl-p~vi~~a~~---~~Ri~~~~gd~~~-~~p--~~D~~~l~~vlh~~~ 217 (287)
.....+|||||||. .+|. |.+++.+++ ..+++++.+|+.+ +++ .+|+|++.+++|+++
T Consensus 51 ~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~ 130 (242)
T 3l8d_A 51 VKKEAEVLDVGCGDGYGTYKLSRTGYKAVGVDISEVMIQKGKERGEGPDLSFIKGDLSSLPFENEQFEAIMAINSLEWTE 130 (242)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHTTTCBTTEEEEECBTTBCSSCTTCEEEEEEESCTTSSS
T ss_pred cCCCCeEEEEcCCCCHHHHHHHHcCCeEEEEECCHHHHHHHHhhcccCCceEEEcchhcCCCCCCCccEEEEcChHhhcc
Confidence 34667999999999 5666 666666654 5789999999998 555 499999999999997
Q ss_pred hHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCCC-------------CCCCHHHHHHHHHhCCCcEEEEEec
Q 043585 218 GEDSLKILKKCREAIAGNGQRGKVLIMDIVINEKEDE-------------DQRTDKEWKTLFLDAGFTCCKITTM 279 (287)
Q Consensus 218 d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~-------------~~rt~~e~~~ll~~aGf~~~~~~~~ 279 (287)
+. ..+|+++++.|+| ||+++|.+......... ..++.+++.++++++||+++++...
T Consensus 131 ~~--~~~l~~~~~~L~p---gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 200 (242)
T 3l8d_A 131 EP--LRALNEIKRVLKS---DGYACIAILGPTAKPRENSYPRLYGKDVVCNTMMPWEFEQLVKEQGFKVVDGIGV 200 (242)
T ss_dssp CH--HHHHHHHHHHEEE---EEEEEEEEECTTCGGGGGGGGGGGTCCCSSCCCCHHHHHHHHHHTTEEEEEEEEE
T ss_pred CH--HHHHHHHHHHhCC---CeEEEEEEcCCcchhhhhhhhhhccccccccCCCHHHHHHHHHHcCCEEEEeecc
Confidence 65 5899999999999 99999987543322110 4478999999999999999988765
No 44
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.25 E-value=1.3e-11 Score=107.24 Aligned_cols=115 Identities=13% Similarity=0.102 Sum_probs=92.2
Q ss_pred ccCcceEEEecCcc----------------cccc-hhhhhcCCC-------CCCceeeeccCcc-cCC--CCCeEEeccc
Q 043585 160 IERLGSMVDVGGGN----------------VLDL-PHAVANTPQ-------TENLKYVADDMFQ-FIP--PADAYFFMLF 212 (287)
Q Consensus 160 ~~~~~~vlDvGgG~----------------v~Dl-p~vi~~a~~-------~~Ri~~~~gd~~~-~~p--~~D~~~l~~v 212 (287)
.....+|||||||. .+|+ |..++.+++ .+|++++.+|+.+ +++ .+|+|++..+
T Consensus 44 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 123 (257)
T 3f4k_A 44 LTDDAKIADIGCGTGGQTLFLADYVKGQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLPFQNEELDLIWSEGA 123 (257)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCSSCTTCEEEEEEESC
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCCCCCCCEEEEEecCh
Confidence 45567999999999 5665 566666543 4679999999977 555 4999999999
Q ss_pred cccCChHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCCC------------CCCCHHHHHHHHHhCCCcEEEEEecC
Q 043585 213 FHAFGGEDSLKILKKCREAIAGNGQRGKVLIMDIVINEKEDE------------DQRTDKEWKTLFLDAGFTCCKITTMF 280 (287)
Q Consensus 213 lh~~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~------------~~rt~~e~~~ll~~aGf~~~~~~~~~ 280 (287)
+|+++. ..+|+++++.|+| ||++++.+......... ..++.++|.++|+++||+++.+...+
T Consensus 124 l~~~~~---~~~l~~~~~~L~p---gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~~ 197 (257)
T 3f4k_A 124 IYNIGF---ERGMNEWSKYLKK---GGFIAVSEASWFTSERPAEIEDFWMDAYPEISVIPTCIDKMERAGYTPTAHFILP 197 (257)
T ss_dssp SCCCCH---HHHHHHHHTTEEE---EEEEEEEEEEESSSCCCHHHHHHHHHHCTTCCBHHHHHHHHHHTTEEEEEEEECC
T ss_pred HhhcCH---HHHHHHHHHHcCC---CcEEEEEEeeccCCCChHHHHHHHHHhCCCCCCHHHHHHHHHHCCCeEEEEEECC
Confidence 999943 5799999999999 99999999764433322 46689999999999999999887664
No 45
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.25 E-value=1.3e-11 Score=106.11 Aligned_cols=114 Identities=11% Similarity=0.172 Sum_probs=89.1
Q ss_pred cCcceEEEecCcc---------------cccc-hhhhhcCCC--CCCceeeeccCcccCC--CCCeEEeccccccCChHH
Q 043585 161 ERLGSMVDVGGGN---------------VLDL-PHAVANTPQ--TENLKYVADDMFQFIP--PADAYFFMLFFHAFGGED 220 (287)
Q Consensus 161 ~~~~~vlDvGgG~---------------v~Dl-p~vi~~a~~--~~Ri~~~~gd~~~~~p--~~D~~~l~~vlh~~~d~~ 220 (287)
....+|||||||. .+|. |.+++.+++ ..+++++.+|+.+..+ .+|+|++.++||++++.
T Consensus 41 ~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~l~~~~~~- 119 (250)
T 2p7i_A 41 FRPGNLLELGSFKGDFTSRLQEHFNDITCVEASEEAISHAQGRLKDGITYIHSRFEDAQLPRRYDNIVLTHVLEHIDDP- 119 (250)
T ss_dssp CCSSCEEEESCTTSHHHHHHTTTCSCEEEEESCHHHHHHHHHHSCSCEEEEESCGGGCCCSSCEEEEEEESCGGGCSSH-
T ss_pred cCCCcEEEECCCCCHHHHHHHHhCCcEEEEeCCHHHHHHHHHhhhCCeEEEEccHHHcCcCCcccEEEEhhHHHhhcCH-
Confidence 3567899999999 4565 566666654 2289999999988533 49999999999999876
Q ss_pred HHHHHHHHH-HHhcCCCCCcEEEEEeeccCCC------------------------CCCCCCCHHHHHHHHHhCCCcEEE
Q 043585 221 SLKILKKCR-EAIAGNGQRGKVLIMDIVINEK------------------------EDEDQRTDKEWKTLFLDAGFTCCK 275 (287)
Q Consensus 221 ~~~iL~~~~-~al~~~~~~g~lli~e~~~~~~------------------------~~~~~rt~~e~~~ll~~aGf~~~~ 275 (287)
.++|++++ +.|+| ||++++.++..... .....+|.+++.++|+++||++++
T Consensus 120 -~~~l~~~~~~~Lkp---gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~ 195 (250)
T 2p7i_A 120 -VALLKRINDDWLAE---GGRLFLVCPNANAVSRQIAVKMGIISHNSAVTEAEFAHGHRCTYALDTLERDASRAGLQVTY 195 (250)
T ss_dssp -HHHHHHHHHTTEEE---EEEEEEEEECTTCHHHHHHHHTTSSSSTTCCCHHHHHTTCCCCCCHHHHHHHHHHTTCEEEE
T ss_pred -HHHHHHHHHHhcCC---CCEEEEEcCChHHHHHHHHHHcCccccchhcccccccccccccCCHHHHHHHHHHCCCeEEE
Confidence 58999999 99999 99999987543210 001457999999999999999988
Q ss_pred EEec
Q 043585 276 ITTM 279 (287)
Q Consensus 276 ~~~~ 279 (287)
+...
T Consensus 196 ~~~~ 199 (250)
T 2p7i_A 196 RSGI 199 (250)
T ss_dssp EEEE
T ss_pred Eeee
Confidence 7654
No 46
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.25 E-value=9.3e-12 Score=108.09 Aligned_cols=116 Identities=16% Similarity=0.159 Sum_probs=92.4
Q ss_pred cccCcceEEEecCcc----------------cccc-hhhhhcCCC-------CCCceeeeccCcc-cCC-CCCeEEeccc
Q 043585 159 LIERLGSMVDVGGGN----------------VLDL-PHAVANTPQ-------TENLKYVADDMFQ-FIP-PADAYFFMLF 212 (287)
Q Consensus 159 ~~~~~~~vlDvGgG~----------------v~Dl-p~vi~~a~~-------~~Ri~~~~gd~~~-~~p-~~D~~~l~~v 212 (287)
......+|||||||. .+|. |.+++.+++ .++++++.+|+.+ +.+ .+|+|++..+
T Consensus 33 ~~~~~~~VLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~V~~~~~ 112 (256)
T 1nkv_A 33 RMKPGTRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYVANEKCDVAACVGA 112 (256)
T ss_dssp CCCTTCEEEEETCTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCCCSSCEEEEEEESC
T ss_pred CCCCCCEEEEECCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCCcCCCCCEEEECCC
Confidence 355678999999998 4665 666666643 3689999999988 333 4999999999
Q ss_pred cccCChHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCCC-------------CCCCHHHHHHHHHhCCCcEEEEEec
Q 043585 213 FHAFGGEDSLKILKKCREAIAGNGQRGKVLIMDIVINEKEDE-------------DQRTDKEWKTLFLDAGFTCCKITTM 279 (287)
Q Consensus 213 lh~~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~-------------~~rt~~e~~~ll~~aGf~~~~~~~~ 279 (287)
+|++++. .++|+++++.|+| ||++++.+......... ..++.++|.++|+++||+.+++...
T Consensus 113 ~~~~~~~--~~~l~~~~r~Lkp---gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~ 187 (256)
T 1nkv_A 113 TWIAGGF--AGAEELLAQSLKP---GGIMLIGEPYWRQLPATEEIAQACGVSSTSDFLTLPGLVGAFDDLGYDVVEMVLA 187 (256)
T ss_dssp GGGTSSS--HHHHHHHTTSEEE---EEEEEEEEEEETTCCSSHHHHHTTTCSCGGGSCCHHHHHHHHHTTTBCCCEEEEC
T ss_pred hHhcCCH--HHHHHHHHHHcCC---CeEEEEecCcccCCCChHHHHHHHhcccccccCCHHHHHHHHHHCCCeeEEEEeC
Confidence 9999864 6899999999999 99999998866443321 4568999999999999998877543
No 47
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.23 E-value=1.5e-11 Score=107.85 Aligned_cols=115 Identities=13% Similarity=0.078 Sum_probs=93.2
Q ss_pred ccCcceEEEecCcc----------------cccc-hhhhhcCCC-------CCCceeeeccCcc-cCC--CCCeEEeccc
Q 043585 160 IERLGSMVDVGGGN----------------VLDL-PHAVANTPQ-------TENLKYVADDMFQ-FIP--PADAYFFMLF 212 (287)
Q Consensus 160 ~~~~~~vlDvGgG~----------------v~Dl-p~vi~~a~~-------~~Ri~~~~gd~~~-~~p--~~D~~~l~~v 212 (287)
.....+|||||||. .+|+ |..++.+++ .++++++.+|+.+ +++ .+|+|++..+
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i~~~~~ 123 (267)
T 3kkz_A 44 LTEKSLIADIGCGTGGQTMVLAGHVTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLPFRNEELDLIWSEGA 123 (267)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHTTCSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEEEEESSC
T ss_pred CCCCCEEEEeCCCCCHHHHHHHhccCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCCCCCCCEEEEEEcCC
Confidence 45678999999998 5665 666666553 4789999999987 554 4999999999
Q ss_pred cccCChHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCCC------------CCCCHHHHHHHHHhCCCcEEEEEecC
Q 043585 213 FHAFGGEDSLKILKKCREAIAGNGQRGKVLIMDIVINEKEDE------------DQRTDKEWKTLFLDAGFTCCKITTMF 280 (287)
Q Consensus 213 lh~~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~------------~~rt~~e~~~ll~~aGf~~~~~~~~~ 280 (287)
+|.++. ..+|+++++.|+| ||++++.+......... ..++.+++.++++++||+++++...+
T Consensus 124 ~~~~~~---~~~l~~~~~~Lkp---gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~~ 197 (267)
T 3kkz_A 124 IYNIGF---ERGLNEWRKYLKK---GGYLAVSECSWFTDERPAEINDFWMDAYPEIDTIPNQVAKIHKAGYLPVATFILP 197 (267)
T ss_dssp GGGTCH---HHHHHHHGGGEEE---EEEEEEEEEEESSSCCCHHHHHHHHHHCTTCEEHHHHHHHHHHTTEEEEEEEECC
T ss_pred ceecCH---HHHHHHHHHHcCC---CCEEEEEEeeecCCCChHHHHHHHHHhCCCCCCHHHHHHHHHHCCCEEEEEEECC
Confidence 999943 5789999999999 99999999875443322 45689999999999999999888765
No 48
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.23 E-value=1.7e-11 Score=104.59 Aligned_cols=117 Identities=14% Similarity=0.203 Sum_probs=91.5
Q ss_pred ccCcceEEEecCcc---------------cccc-hhhhhcCCC-----------CCCceeeeccCcc-cCC--CCCeEEe
Q 043585 160 IERLGSMVDVGGGN---------------VLDL-PHAVANTPQ-----------TENLKYVADDMFQ-FIP--PADAYFF 209 (287)
Q Consensus 160 ~~~~~~vlDvGgG~---------------v~Dl-p~vi~~a~~-----------~~Ri~~~~gd~~~-~~p--~~D~~~l 209 (287)
+....+|||||||. .+|. |.+++.+++ .+++++..+|+.+ +++ .+|+|++
T Consensus 28 ~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~ 107 (235)
T 3sm3_A 28 LQEDDEILDIGCGSGKISLELASKGYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFDFAVM 107 (235)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEEEEE
T ss_pred CCCCCeEEEECCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCceeEEEE
Confidence 35678999999998 5676 556655542 2368999999988 554 4999999
Q ss_pred ccccccCCh-HHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCC--------------------------------CCC
Q 043585 210 MLFFHAFGG-EDSLKILKKCREAIAGNGQRGKVLIMDIVINEKED--------------------------------EDQ 256 (287)
Q Consensus 210 ~~vlh~~~d-~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~--------------------------------~~~ 256 (287)
..++|++++ ++..++|+++++.|+| ||++++.+........ ...
T Consensus 108 ~~~l~~~~~~~~~~~~l~~~~~~L~p---gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (235)
T 3sm3_A 108 QAFLTSVPDPKERSRIIKEVFRVLKP---GAYLYLVEFGQNWHLKLYRKRYLHDFPITKEEGSFLARDPETGETEFIAHH 184 (235)
T ss_dssp ESCGGGCCCHHHHHHHHHHHHHHEEE---EEEEEEEEEBCCTTSHHHHHHHHHHHHHHCSTTEEEEECTTTCCEEEEEEC
T ss_pred cchhhcCCCHHHHHHHHHHHHHHcCC---CeEEEEEECCcchhHHHHHHHhhhhccchhhhcceEecccccCCcceeeEe
Confidence 999999965 5577899999999999 9999999874432110 046
Q ss_pred CCHHHHHHHHHhCCCcEEEEEec
Q 043585 257 RTDKEWKTLFLDAGFTCCKITTM 279 (287)
Q Consensus 257 rt~~e~~~ll~~aGf~~~~~~~~ 279 (287)
++.++|.++|+++||+++++...
T Consensus 185 ~~~~~l~~ll~~aGf~~~~~~~~ 207 (235)
T 3sm3_A 185 FTEKELVFLLTDCRFEIDYFRVK 207 (235)
T ss_dssp BCHHHHHHHHHTTTEEEEEEEEE
T ss_pred CCHHHHHHHHHHcCCEEEEEEec
Confidence 79999999999999999887643
No 49
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.23 E-value=1.9e-11 Score=104.75 Aligned_cols=122 Identities=16% Similarity=0.120 Sum_probs=92.7
Q ss_pred cCcceEEEecCcc---------------cccc-hhhhhcCCC-CCCceeeeccCcc-cCC-CCCeEEe-ccccccC-ChH
Q 043585 161 ERLGSMVDVGGGN---------------VLDL-PHAVANTPQ-TENLKYVADDMFQ-FIP-PADAYFF-MLFFHAF-GGE 219 (287)
Q Consensus 161 ~~~~~vlDvGgG~---------------v~Dl-p~vi~~a~~-~~Ri~~~~gd~~~-~~p-~~D~~~l-~~vlh~~-~d~ 219 (287)
.+..+|||||||. .+|. |.+++.+++ .++++++.+|+.+ +.+ .+|+|++ ..++|+. +++
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~~~~~~~~~~ 118 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKEFGDTAGLELSEDMLTHARKRLPDATLHQGDMRDFRLGRKFSAVVSMFSSVGYLKTTE 118 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHHSEEEEEESCHHHHHHHHHHCTTCEEEECCTTTCCCSSCEEEEEECTTGGGGCCSHH
T ss_pred CCCCeEEEecccCCHHHHHHHHhCCcEEEEeCCHHHHHHHHHhCCCCEEEECCHHHcccCCCCcEEEEcCchHhhcCCHH
Confidence 5568999999998 5676 677777665 5689999999988 444 4999994 5588887 447
Q ss_pred HHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCC-----------------------------------------CC----
Q 043585 220 DSLKILKKCREAIAGNGQRGKVLIMDIVINEKE-----------------------------------------DE---- 254 (287)
Q Consensus 220 ~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~-----------------------------------------~~---- 254 (287)
+..++|+++++.|+| ||++++.+...++.. ..
T Consensus 119 ~~~~~l~~~~~~L~p---gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (239)
T 3bxo_A 119 ELGAAVASFAEHLEP---GGVVVVEPWWFPETFADGWVSADVVRRDGRTVARVSHSVREGNATRMEVHFTVADPGKGVRH 195 (239)
T ss_dssp HHHHHHHHHHHTEEE---EEEEEECCCCCTTTCCTTCEEEEEEEETTEEEEEEEEEEEETTEEEEEEEEEEEETTTEEEE
T ss_pred HHHHHHHHHHHhcCC---CeEEEEEeccCcccccccceEeeEEecCCceEEEEEEEecCCCEEEEEEEEEEecCCCcceE
Confidence 789999999999999 999988765443321 00
Q ss_pred -------CCCCHHHHHHHHHhCCCcEEEEEecCCccce
Q 043585 255 -------DQRTDKEWKTLFLDAGFTCCKITTMFGLKSL 285 (287)
Q Consensus 255 -------~~rt~~e~~~ll~~aGf~~~~~~~~~~~~s~ 285 (287)
+.+|.+||.++|++|||+++.+....+...+
T Consensus 196 ~~~~~~~~~~t~~~~~~ll~~aGF~v~~~~~~~~~~~~ 233 (239)
T 3bxo_A 196 FSDVHLITLFHQAEYEAAFTAAGLRVEYLEGGPSGRGL 233 (239)
T ss_dssp EEEEEEEECCCHHHHHHHHHHTTEEEEEESSTTTSSCE
T ss_pred EEEEEEeeecCHHHHHHHHHHCCCEEEEeEcCCCCceE
Confidence 3368999999999999988777655444333
No 50
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.19 E-value=1.7e-11 Score=103.56 Aligned_cols=116 Identities=9% Similarity=0.055 Sum_probs=91.0
Q ss_pred ccCcceEEEecCcc---------------cccc-hhhhhcCCC------------------CCCceeeeccCcc-cCC--
Q 043585 160 IERLGSMVDVGGGN---------------VLDL-PHAVANTPQ------------------TENLKYVADDMFQ-FIP-- 202 (287)
Q Consensus 160 ~~~~~~vlDvGgG~---------------v~Dl-p~vi~~a~~------------------~~Ri~~~~gd~~~-~~p-- 202 (287)
.....+|||+|||. .+|+ +.+++.|++ ..+++++.+|+++ +.+
T Consensus 20 ~~~~~~vLD~GCG~G~~~~~la~~g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~~~ 99 (203)
T 1pjz_A 20 VVPGARVLVPLCGKSQDMSWLSGQGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARDI 99 (203)
T ss_dssp CCTTCEEEETTTCCSHHHHHHHHHCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHHH
T ss_pred cCCCCEEEEeCCCCcHhHHHHHHCCCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCcccC
Confidence 45678999999999 5776 667776643 2589999999998 432
Q ss_pred -CCCeEEeccccccCChHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCC---CCCCCCCHHHHHHHHHhCCCcEEEEEe
Q 043585 203 -PADAYFFMLFFHAFGGEDSLKILKKCREAIAGNGQRGKVLIMDIVINEK---EDEDQRTDKEWKTLFLDAGFTCCKITT 278 (287)
Q Consensus 203 -~~D~~~l~~vlh~~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~---~~~~~rt~~e~~~ll~~aGf~~~~~~~ 278 (287)
.||+|+.+.++|.+++++..++++++++.|+| ||+++++....+.. +.+...+.+|+.+++++ ||++..+..
T Consensus 100 ~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~Lkp---gG~~~l~~~~~~~~~~~~~~~~~~~~el~~~~~~-gf~i~~~~~ 175 (203)
T 1pjz_A 100 GHCAAFYDRAAMIALPADMRERYVQHLEALMPQ---ACSGLLITLEYDQALLEGPPFSVPQTWLHRVMSG-NWEVTKVGG 175 (203)
T ss_dssp HSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCS---EEEEEEEEESSCSSSSSSCCCCCCHHHHHHTSCS-SEEEEEEEE
T ss_pred CCEEEEEECcchhhCCHHHHHHHHHHHHHHcCC---CcEEEEEEEecCccccCCCCCCCCHHHHHHHhcC-CcEEEEecc
Confidence 59999999999999988888999999999999 99955554433321 12245689999999999 999887765
Q ss_pred c
Q 043585 279 M 279 (287)
Q Consensus 279 ~ 279 (287)
.
T Consensus 176 ~ 176 (203)
T 1pjz_A 176 Q 176 (203)
T ss_dssp S
T ss_pred c
Confidence 5
No 51
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.19 E-value=7.4e-11 Score=106.08 Aligned_cols=118 Identities=19% Similarity=0.224 Sum_probs=94.9
Q ss_pred cccCcceEEEecCcc----------------cccc-hhhhhcCCC-------CCCceeeeccCcccCCCCCeEEeccccc
Q 043585 159 LIERLGSMVDVGGGN----------------VLDL-PHAVANTPQ-------TENLKYVADDMFQFIPPADAYFFMLFFH 214 (287)
Q Consensus 159 ~~~~~~~vlDvGgG~----------------v~Dl-p~vi~~a~~-------~~Ri~~~~gd~~~~~p~~D~~~l~~vlh 214 (287)
......+|||||||. .+|+ |..++.+++ .++++++.+|+.+....+|+|++..++|
T Consensus 87 ~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~fD~v~~~~~l~ 166 (318)
T 2fk8_A 87 DLKPGMTLLDIGCGWGTTMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFAEPVDRIVSIEAFE 166 (318)
T ss_dssp CCCTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCCCCCSEEEEESCGG
T ss_pred CCCCcCEEEEEcccchHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHCCCCcCEEEEeChHH
Confidence 445678999999998 4665 566666543 3689999999876313599999999999
Q ss_pred cCChHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCC--------------------------CCCCCCHHHHHHHHHh
Q 043585 215 AFGGEDSLKILKKCREAIAGNGQRGKVLIMDIVINEKE--------------------------DEDQRTDKEWKTLFLD 268 (287)
Q Consensus 215 ~~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~--------------------------~~~~rt~~e~~~ll~~ 268 (287)
++++++..++|+++++.|+| ||++++.+...+... ....+|.+++.+++++
T Consensus 167 ~~~~~~~~~~l~~~~~~Lkp---gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~ 243 (318)
T 2fk8_A 167 HFGHENYDDFFKRCFNIMPA---DGRMTVQSSVSYHPYEMAARGKKLSFETARFIKFIVTEIFPGGRLPSTEMMVEHGEK 243 (318)
T ss_dssp GTCGGGHHHHHHHHHHHSCT---TCEEEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHHHHTSTTCCCCCHHHHHHHHHH
T ss_pred hcCHHHHHHHHHHHHHhcCC---CcEEEEEEeccCCchhhhhccccccccccchhhHHHHhcCCCCcCCCHHHHHHHHHh
Confidence 99888889999999999999 999999988765421 1145689999999999
Q ss_pred CCCcEEEEEec
Q 043585 269 AGFTCCKITTM 279 (287)
Q Consensus 269 aGf~~~~~~~~ 279 (287)
+||+++++...
T Consensus 244 aGf~~~~~~~~ 254 (318)
T 2fk8_A 244 AGFTVPEPLSL 254 (318)
T ss_dssp TTCBCCCCEEC
T ss_pred CCCEEEEEEec
Confidence 99999887664
No 52
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.19 E-value=3.6e-11 Score=103.29 Aligned_cols=114 Identities=18% Similarity=0.263 Sum_probs=87.1
Q ss_pred cCcceEEEecCcc----------------cccc-hhhhhcCCC---CCCceeeeccCcc-cCC--CCCeEEeccccccCC
Q 043585 161 ERLGSMVDVGGGN----------------VLDL-PHAVANTPQ---TENLKYVADDMFQ-FIP--PADAYFFMLFFHAFG 217 (287)
Q Consensus 161 ~~~~~vlDvGgG~----------------v~Dl-p~vi~~a~~---~~Ri~~~~gd~~~-~~p--~~D~~~l~~vlh~~~ 217 (287)
....+|||||||. .+|. |.+++.+++ ..+++++.+|+.+ +++ .+|+|++..++|+++
T Consensus 42 ~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~ 121 (243)
T 3bkw_A 42 VGGLRIVDLGCGFGWFCRWAHEHGASYVLGLDLSEKMLARARAAGPDTGITYERADLDKLHLPQDSFDLAYSSLALHYVE 121 (243)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCSSSEEEEECCGGGCCCCTTCEEEEEEESCGGGCS
T ss_pred cCCCEEEEEcCcCCHHHHHHHHCCCCeEEEEcCCHHHHHHHHHhcccCCceEEEcChhhccCCCCCceEEEEeccccccc
Confidence 4567999999998 4554 556665543 3579999999988 554 499999999999997
Q ss_pred hHHHHHHHHHHHHHhcCCCCCcEEEEEeecc---CCCC---------------C---------------C---CCCCHHH
Q 043585 218 GEDSLKILKKCREAIAGNGQRGKVLIMDIVI---NEKE---------------D---------------E---DQRTDKE 261 (287)
Q Consensus 218 d~~~~~iL~~~~~al~~~~~~g~lli~e~~~---~~~~---------------~---------------~---~~rt~~e 261 (287)
+ ...+|+++++.|+| ||++++.+... .... . . ..+|.++
T Consensus 122 ~--~~~~l~~~~~~L~p---gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~ 196 (243)
T 3bkw_A 122 D--VARLFRTVHQALSP---GGHFVFSTEHPIYMAPARPGWAIDAEGRRTWPIDRYLVEGPRKTDWLAKGVVKHHRTVGT 196 (243)
T ss_dssp C--HHHHHHHHHHHEEE---EEEEEEEEECHHHHCCSSCSCEECTTSCEEEEECCTTCCEEECTTHHHHSCCEEECCHHH
T ss_pred h--HHHHHHHHHHhcCc---CcEEEEEeCCcccccCcCcceeecCCCceEEeecccccccceeeeeccCceEEEeccHHH
Confidence 6 46899999999999 99999876321 0000 0 0 2258999
Q ss_pred HHHHHHhCCCcEEEEEec
Q 043585 262 WKTLFLDAGFTCCKITTM 279 (287)
Q Consensus 262 ~~~ll~~aGf~~~~~~~~ 279 (287)
|.++|+++||+++++...
T Consensus 197 ~~~~l~~aGF~~~~~~~~ 214 (243)
T 3bkw_A 197 TLNALIRSGFAIEHVEEF 214 (243)
T ss_dssp HHHHHHHTTCEEEEEEEC
T ss_pred HHHHHHHcCCEeeeeccC
Confidence 999999999999988865
No 53
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.18 E-value=9.5e-11 Score=104.67 Aligned_cols=119 Identities=19% Similarity=0.200 Sum_probs=96.0
Q ss_pred cccCcceEEEecCcc----------------cccc-hhhhhcCCC-------CCCceeeeccCcccCCCCCeEEeccccc
Q 043585 159 LIERLGSMVDVGGGN----------------VLDL-PHAVANTPQ-------TENLKYVADDMFQFIPPADAYFFMLFFH 214 (287)
Q Consensus 159 ~~~~~~~vlDvGgG~----------------v~Dl-p~vi~~a~~-------~~Ri~~~~gd~~~~~p~~D~~~l~~vlh 214 (287)
......+|||||||. .+|+ |..++.+++ .++++++.+|+.+....+|+|++..++|
T Consensus 69 ~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~fD~v~~~~~~~ 148 (302)
T 3hem_A 69 NLEPGMTLLDIGCGWGSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEFDEPVDRIVSLGAFE 148 (302)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGCCCCCSEEEEESCGG
T ss_pred CCCCcCEEEEeeccCcHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHcCCCccEEEEcchHH
Confidence 456678999999999 5666 666666653 4589999999977522599999999999
Q ss_pred cCCh-------HHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCC--------------------------CCCCCCHHH
Q 043585 215 AFGG-------EDSLKILKKCREAIAGNGQRGKVLIMDIVINEKE--------------------------DEDQRTDKE 261 (287)
Q Consensus 215 ~~~d-------~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~--------------------------~~~~rt~~e 261 (287)
+++| ++...+|+++++.|+| ||+++|.+...++.. ....++.++
T Consensus 149 ~~~d~~~~~~~~~~~~~l~~~~~~Lkp---gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~s~~~ 225 (302)
T 3hem_A 149 HFADGAGDAGFERYDTFFKKFYNLTPD---DGRMLLHTITIPDKEEAQELGLTSPMSLLRFIKFILTEIFPGGRLPRISQ 225 (302)
T ss_dssp GTTCCSSCCCTTHHHHHHHHHHHSSCT---TCEEEEEEEECCCHHHHHHHTCCCCHHHHHHHHHHHHHTCTTCCCCCHHH
T ss_pred hcCccccccchhHHHHHHHHHHHhcCC---CcEEEEEEEeccCccchhhccccccccccchHHHHHHhcCCCCCCCCHHH
Confidence 9944 6778999999999999 999999988765431 115678999
Q ss_pred HHHHHHhCCCcEEEEEecC
Q 043585 262 WKTLFLDAGFTCCKITTMF 280 (287)
Q Consensus 262 ~~~ll~~aGf~~~~~~~~~ 280 (287)
+.++++++||+++.+....
T Consensus 226 ~~~~l~~aGf~~~~~~~~~ 244 (302)
T 3hem_A 226 VDYYSSNAGWKVERYHRIG 244 (302)
T ss_dssp HHHHHHHHTCEEEEEEECG
T ss_pred HHHHHHhCCcEEEEEEeCc
Confidence 9999999999999987764
No 54
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.16 E-value=2e-10 Score=94.83 Aligned_cols=111 Identities=15% Similarity=0.116 Sum_probs=90.7
Q ss_pred ccCcceEEEecCcc---------------cccc-hhhhhcCCC-CCCceeeeccCcc-cCC--CCCeEEec-cccccCCh
Q 043585 160 IERLGSMVDVGGGN---------------VLDL-PHAVANTPQ-TENLKYVADDMFQ-FIP--PADAYFFM-LFFHAFGG 218 (287)
Q Consensus 160 ~~~~~~vlDvGgG~---------------v~Dl-p~vi~~a~~-~~Ri~~~~gd~~~-~~p--~~D~~~l~-~vlh~~~d 218 (287)
.....+|||||||. .+|. |.+++.+++ ..+++++.+|+.+ +++ .+|+|++. .++|.+++
T Consensus 44 ~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~D~i~~~~~~~~~~~~ 123 (195)
T 3cgg_A 44 APRGAKILDAGCGQGRIGGYLSKQGHDVLGTDLDPILIDYAKQDFPEARWVVGDLSVDQISETDFDLIVSAGNVMGFLAE 123 (195)
T ss_dssp SCTTCEEEEETCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTSEEEECCTTTSCCCCCCEEEEEECCCCGGGSCH
T ss_pred ccCCCeEEEECCCCCHHHHHHHHCCCcEEEEcCCHHHHHHHHHhCCCCcEEEcccccCCCCCCceeEEEECCcHHhhcCh
Confidence 35678999999998 4555 566666654 5679999999988 555 49999998 89999999
Q ss_pred HHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCCCCCCCHHHHHHHHHhCCCcEEEEEec
Q 043585 219 EDSLKILKKCREAIAGNGQRGKVLIMDIVINEKEDEDQRTDKEWKTLFLDAGFTCCKITTM 279 (287)
Q Consensus 219 ~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~~~rt~~e~~~ll~~aGf~~~~~~~~ 279 (287)
++...+|+++++.|+| ||++++..... ..++.+++.++++++||++.++...
T Consensus 124 ~~~~~~l~~~~~~l~~---~G~l~~~~~~~------~~~~~~~~~~~l~~~Gf~~~~~~~~ 175 (195)
T 3cgg_A 124 DGREPALANIHRALGA---DGRAVIGFGAG------RGWVFGDFLEVAERVGLELENAFES 175 (195)
T ss_dssp HHHHHHHHHHHHHEEE---EEEEEEEEETT------SSCCHHHHHHHHHHHTEEEEEEESS
T ss_pred HHHHHHHHHHHHHhCC---CCEEEEEeCCC------CCcCHHHHHHHHHHcCCEEeeeecc
Confidence 8899999999999999 89988865322 3478999999999999999888654
No 55
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.15 E-value=7.1e-11 Score=97.00 Aligned_cols=110 Identities=11% Similarity=0.025 Sum_probs=88.4
Q ss_pred cccCcceEEEecCcc-cccc-hhhhhcCCC--CCCceeeeccCcc-cC---C--CCCeEEeccccccC-ChHHHHHHHHH
Q 043585 159 LIERLGSMVDVGGGN-VLDL-PHAVANTPQ--TENLKYVADDMFQ-FI---P--PADAYFFMLFFHAF-GGEDSLKILKK 227 (287)
Q Consensus 159 ~~~~~~~vlDvGgG~-v~Dl-p~vi~~a~~--~~Ri~~~~gd~~~-~~---p--~~D~~~l~~vlh~~-~d~~~~~iL~~ 227 (287)
......+|||||+|. .+|. +.+++.+++ ..+++++.+|+.+ +. + .||+|++..++|++ ++. .++|++
T Consensus 9 g~~~g~~vL~~~~g~v~vD~s~~ml~~a~~~~~~~~~~~~~d~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~--~~~l~~ 86 (176)
T 2ld4_A 9 GISAGQFVAVVWDKSSPVEALKGLVDKLQALTGNEGRVSVENIKQLLQSAHKESSFDIILSGLVPGSTTLHS--AEILAE 86 (176)
T ss_dssp TCCTTSEEEEEECTTSCHHHHHHHHHHHHHHTTTTSEEEEEEGGGGGGGCCCSSCEEEEEECCSTTCCCCCC--HHHHHH
T ss_pred CCCCCCEEEEecCCceeeeCCHHHHHHHHHhcccCcEEEEechhcCccccCCCCCEeEEEECChhhhcccCH--HHHHHH
Confidence 356778999999999 6776 677777764 3469999999987 44 4 39999999999998 554 689999
Q ss_pred HHHHhcCCCCCcEEEEEeeccCCCC-CCCCCCHHHHHHHHHhCCCcEE
Q 043585 228 CREAIAGNGQRGKVLIMDIVINEKE-DEDQRTDKEWKTLFLDAGFTCC 274 (287)
Q Consensus 228 ~~~al~~~~~~g~lli~e~~~~~~~-~~~~rt~~e~~~ll~~aGf~~~ 274 (287)
+++.|+| ||++++.+....... ....++.++|.++|+++|| +.
T Consensus 87 ~~r~Lkp---gG~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf-i~ 130 (176)
T 2ld4_A 87 IARILRP---GGCLFLKEPVETAVDNNSKVKTASKLCSALTLSGL-VE 130 (176)
T ss_dssp HHHHEEE---EEEEEEEEEEESSSCSSSSSCCHHHHHHHHHHTTC-EE
T ss_pred HHHHCCC---CEEEEEEcccccccccccccCCHHHHHHHHHHCCC-cE
Confidence 9999999 999999777654332 2256789999999999999 44
No 56
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.15 E-value=8.1e-11 Score=109.05 Aligned_cols=114 Identities=14% Similarity=0.274 Sum_probs=90.7
Q ss_pred ccCcceEEEecCcc------------------cccc-hhhhhcCCCC--------------CCceeeeccCcc-------
Q 043585 160 IERLGSMVDVGGGN------------------VLDL-PHAVANTPQT--------------ENLKYVADDMFQ------- 199 (287)
Q Consensus 160 ~~~~~~vlDvGgG~------------------v~Dl-p~vi~~a~~~--------------~Ri~~~~gd~~~------- 199 (287)
.....+|||||||. .+|+ |..++.+++. ++++++.+|+.+
T Consensus 81 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~ 160 (383)
T 4fsd_A 81 SLEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPE 160 (383)
T ss_dssp GGTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSC
T ss_pred CCCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccC
Confidence 45678999999999 4555 5566665431 699999999987
Q ss_pred cCC--CCCeEEeccccccCChHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCCC--------------CCCCHHHHH
Q 043585 200 FIP--PADAYFFMLFFHAFGGEDSLKILKKCREAIAGNGQRGKVLIMDIVINEKEDE--------------DQRTDKEWK 263 (287)
Q Consensus 200 ~~p--~~D~~~l~~vlh~~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~--------------~~rt~~e~~ 263 (287)
+++ .+|+|++..++|.+++. .++|+++++.|+| ||+|++.+...+..... ..++.++|.
T Consensus 161 ~~~~~~fD~V~~~~~l~~~~d~--~~~l~~~~r~Lkp---gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (383)
T 4fsd_A 161 GVPDSSVDIVISNCVCNLSTNK--LALFKEIHRVLRD---GGELYFSDVYADRRLSEAAQQDPILYGECLGGALYLEDFR 235 (383)
T ss_dssp CCCTTCEEEEEEESCGGGCSCH--HHHHHHHHHHEEE---EEEEEEEEEEESSCCCHHHHHCHHHHHTTCTTCCBHHHHH
T ss_pred CCCCCCEEEEEEccchhcCCCH--HHHHHHHHHHcCC---CCEEEEEEeccccccCHhHhhhHHHhhcccccCCCHHHHH
Confidence 444 49999999999999875 5899999999999 99999998776543221 446889999
Q ss_pred HHHHhCCCcEEEEEe
Q 043585 264 TLFLDAGFTCCKITT 278 (287)
Q Consensus 264 ~ll~~aGf~~~~~~~ 278 (287)
++|+++||+.+++..
T Consensus 236 ~ll~~aGF~~v~~~~ 250 (383)
T 4fsd_A 236 RLVAEAGFRDVRLVS 250 (383)
T ss_dssp HHHHHTTCCCEEEEE
T ss_pred HHHHHCCCceEEEEe
Confidence 999999998776654
No 57
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.13 E-value=3.5e-10 Score=95.66 Aligned_cols=110 Identities=12% Similarity=0.076 Sum_probs=80.6
Q ss_pred cCcceEEEecCcccccchhhhhcC----CCCCCceeeeccCcc-cCC--CCCeEEeccccccCChHHHHHHHHHHHHHhc
Q 043585 161 ERLGSMVDVGGGNVLDLPHAVANT----PQTENLKYVADDMFQ-FIP--PADAYFFMLFFHAFGGEDSLKILKKCREAIA 233 (287)
Q Consensus 161 ~~~~~vlDvGgG~v~Dlp~vi~~a----~~~~Ri~~~~gd~~~-~~p--~~D~~~l~~vlh~~~d~~~~~iL~~~~~al~ 233 (287)
....+|||||||...-...+.... ....+++++.+|+.+ +++ .+|+|++..++| +. +...+|+++++.|+
T Consensus 66 ~~~~~vLDiG~G~G~~~~~l~~~v~~~D~s~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~-~~--~~~~~l~~~~~~L~ 142 (215)
T 2zfu_A 66 PASLVVADFGCGDCRLASSIRNPVHCFDLASLDPRVTVCDMAQVPLEDESVDVAVFCLSLM-GT--NIRDFLEEANRVLK 142 (215)
T ss_dssp CTTSCEEEETCTTCHHHHHCCSCEEEEESSCSSTTEEESCTTSCSCCTTCEEEEEEESCCC-SS--CHHHHHHHHHHHEE
T ss_pred CCCCeEEEECCcCCHHHHHhhccEEEEeCCCCCceEEEeccccCCCCCCCEeEEEEehhcc-cc--CHHHHHHHHHHhCC
Confidence 456899999999921111110000 012278999999988 554 499999999998 43 35689999999999
Q ss_pred CCCCCcEEEEEeeccCCCCCCCCCCHHHHHHHHHhCCCcEEEEEecCCc
Q 043585 234 GNGQRGKVLIMDIVINEKEDEDQRTDKEWKTLFLDAGFTCCKITTMFGL 282 (287)
Q Consensus 234 ~~~~~g~lli~e~~~~~~~~~~~rt~~e~~~ll~~aGf~~~~~~~~~~~ 282 (287)
| ||++++.+.... ..+.+++.++++++||++++.....+.
T Consensus 143 ~---gG~l~i~~~~~~------~~~~~~~~~~l~~~Gf~~~~~~~~~~~ 182 (215)
T 2zfu_A 143 P---GGLLKVAEVSSR------FEDVRTFLRAVTKLGFKIVSKDLTNSH 182 (215)
T ss_dssp E---EEEEEEEECGGG------CSCHHHHHHHHHHTTEEEEEEECCSTT
T ss_pred C---CeEEEEEEcCCC------CCCHHHHHHHHHHCCCEEEEEecCCCe
Confidence 9 999999886532 247999999999999999887655443
No 58
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.12 E-value=1.8e-10 Score=98.89 Aligned_cols=116 Identities=20% Similarity=0.345 Sum_probs=87.7
Q ss_pred cCcceEEEecCcc--------------cccc-hhhhhcCCC-----CCCceeeeccCcc-cCC-CCCeEEecc-ccccC-
Q 043585 161 ERLGSMVDVGGGN--------------VLDL-PHAVANTPQ-----TENLKYVADDMFQ-FIP-PADAYFFML-FFHAF- 216 (287)
Q Consensus 161 ~~~~~vlDvGgG~--------------v~Dl-p~vi~~a~~-----~~Ri~~~~gd~~~-~~p-~~D~~~l~~-vlh~~- 216 (287)
....+|||||||. .+|. |.+++.+++ ..+++++.+|+.+ +.+ .+|+|++.. ++|++
T Consensus 32 ~~~~~vLdiG~G~G~~~~~l~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~~~~~~~ 111 (243)
T 3d2l_A 32 EPGKRIADIGCGTGTATLLLADHYEVTGVDLSEEMLEIAQEKAMETNRHVDFWVQDMRELELPEPVDAITILCDSLNYLQ 111 (243)
T ss_dssp CTTCEEEEESCTTCHHHHHHTTTSEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCGGGCCCSSCEEEEEECTTGGGGCC
T ss_pred CCCCeEEEecCCCCHHHHHHhhCCeEEEEECCHHHHHHHHHhhhhcCCceEEEEcChhhcCCCCCcCEEEEeCCchhhcC
Confidence 3458999999998 4565 666666653 4689999999988 455 499999986 89887
Q ss_pred ChHHHHHHHHHHHHHhcCCCCCcEEEEEeec-------c--------------------CC---------------CCCC
Q 043585 217 GGEDSLKILKKCREAIAGNGQRGKVLIMDIV-------I--------------------NE---------------KEDE 254 (287)
Q Consensus 217 ~d~~~~~iL~~~~~al~~~~~~g~lli~e~~-------~--------------------~~---------------~~~~ 254 (287)
++++..++|+++++.|+| ||++++.-.. . .. ....
T Consensus 112 ~~~~~~~~l~~~~~~L~p---gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (243)
T 3d2l_A 112 TEADVKQTFDSAARLLTD---GGKLLFDVHSPYKMETLFNGKTYATHAEQSSYIWFADPGEEPLSVVHELTFFIEGEDGR 188 (243)
T ss_dssp SHHHHHHHHHHHHHHEEE---EEEEEEEEECHHHHHTTTSSEEEEEECSSEEEEEEEEECSSTTEEEEEEEEEEECTTSC
T ss_pred CHHHHHHHHHHHHHhcCC---CeEEEEEcCCHHHHHHhcCCcceeEECCCcEEEEEeecCccccEEEEEEEEEEEcCCCc
Confidence 677889999999999999 8988862100 0 00 0000
Q ss_pred ----------CCCCHHHHHHHHHhCCCcEEEEEec
Q 043585 255 ----------DQRTDKEWKTLFLDAGFTCCKITTM 279 (287)
Q Consensus 255 ----------~~rt~~e~~~ll~~aGf~~~~~~~~ 279 (287)
+.+|.+|+.++|++|||+++++...
T Consensus 189 ~~~~~~~~~~~~~~~~~l~~~l~~aGf~~~~~~~~ 223 (243)
T 3d2l_A 189 YDRVDETHHQRTYPPEQYITWLREAGFRVCAVTGD 223 (243)
T ss_dssp EEEEEEEEEEECCCHHHHHHHHHHTTEEEEEEEET
T ss_pred eEEEEEEEeEecCCHHHHHHHHHHCCCeEEEEecC
Confidence 3469999999999999999998764
No 59
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.11 E-value=1.3e-10 Score=96.65 Aligned_cols=115 Identities=15% Similarity=0.163 Sum_probs=91.8
Q ss_pred ccCcceEEEecCcc---------------cccc-hhhhhcCCC------CCCceeeeccCcc-cCC-CCCeEEecccccc
Q 043585 160 IERLGSMVDVGGGN---------------VLDL-PHAVANTPQ------TENLKYVADDMFQ-FIP-PADAYFFMLFFHA 215 (287)
Q Consensus 160 ~~~~~~vlDvGgG~---------------v~Dl-p~vi~~a~~------~~Ri~~~~gd~~~-~~p-~~D~~~l~~vlh~ 215 (287)
.....+|||||||. .+|. |.+++.+++ .++++++.+|+.+ +.+ .+|+|++..++|+
T Consensus 30 ~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~l~~ 109 (199)
T 2xvm_A 30 VVKPGKTLDLGCGNGRNSLYLAANGYDVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNLTFDRQYDFILSTVVLMF 109 (199)
T ss_dssp TSCSCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGGCCCCCCEEEEEEESCGGG
T ss_pred ccCCCeEEEEcCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhhCCCCCCceEEEEcchhhh
Confidence 34567999999998 5666 666666653 3479999999988 444 4999999999999
Q ss_pred CChHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCCC-----CCCCHHHHHHHHHhCCCcEEEEEec
Q 043585 216 FGGEDSLKILKKCREAIAGNGQRGKVLIMDIVINEKEDE-----DQRTDKEWKTLFLDAGFTCCKITTM 279 (287)
Q Consensus 216 ~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~-----~~rt~~e~~~ll~~aGf~~~~~~~~ 279 (287)
+++++..++|+++++.|+| ||++++++....+.... ..++.+++.++|++ |++++....
T Consensus 110 ~~~~~~~~~l~~~~~~L~~---gG~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--f~~~~~~~~ 173 (199)
T 2xvm_A 110 LEAKTIPGLIANMQRCTKP---GGYNLIVAAMDTADYPCTVGFPFAFKEGELRRYYEG--WERVKYNED 173 (199)
T ss_dssp SCGGGHHHHHHHHHHTEEE---EEEEEEEEEBCCSSSCCCSCCSCCBCTTHHHHHTTT--SEEEEEECC
T ss_pred CCHHHHHHHHHHHHHhcCC---CeEEEEEEeeccCCcCCCCCCCCccCHHHHHHHhcC--CeEEEeccc
Confidence 9988889999999999999 99999988776543221 45689999999987 998877644
No 60
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.11 E-value=1.4e-10 Score=102.65 Aligned_cols=115 Identities=16% Similarity=0.213 Sum_probs=91.2
Q ss_pred CcceEEEecCcc---------------cccc-hhhhhcCCC-------CCCceeeeccCcc-c-CC--CCCeEEeccccc
Q 043585 162 RLGSMVDVGGGN---------------VLDL-PHAVANTPQ-------TENLKYVADDMFQ-F-IP--PADAYFFMLFFH 214 (287)
Q Consensus 162 ~~~~vlDvGgG~---------------v~Dl-p~vi~~a~~-------~~Ri~~~~gd~~~-~-~p--~~D~~~l~~vlh 214 (287)
+..+|||||||. .+|. |.+++.+++ .++++++.+|+.+ + ++ .+|+|++..++|
T Consensus 68 ~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~l~ 147 (285)
T 4htf_A 68 QKLRVLDAGGGEGQTAIKMAERGHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHLETPVDLILFHAVLE 147 (285)
T ss_dssp SCCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGGCSSCEEEEEEESCGG
T ss_pred CCCEEEEeCCcchHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhhcCCCceEEEECchhh
Confidence 357999999999 5676 667776653 2789999999988 3 33 499999999999
Q ss_pred cCChHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCC-----------------CCC--------CCCCCHHHHHHHHHhC
Q 043585 215 AFGGEDSLKILKKCREAIAGNGQRGKVLIMDIVINE-----------------KED--------EDQRTDKEWKTLFLDA 269 (287)
Q Consensus 215 ~~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~-----------------~~~--------~~~rt~~e~~~ll~~a 269 (287)
++++. ..+|+++++.|+| ||++++.+..... ... ...++.+++.++|+++
T Consensus 148 ~~~~~--~~~l~~~~~~Lkp---gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~a 222 (285)
T 4htf_A 148 WVADP--RSVLQTLWSVLRP---GGVLSLMFYNAHGLLMHNMVAGNFDYVQAGMPKKKKRTLSPDYPRDPTQVYLWLEEA 222 (285)
T ss_dssp GCSCH--HHHHHHHHHTEEE---EEEEEEEEEBHHHHHHHHHHTTCHHHHHTTCCCC----CCCSCCBCHHHHHHHHHHT
T ss_pred cccCH--HHHHHHHHHHcCC---CeEEEEEEeCCchHHHHHHHhcCHHHHhhhccccccccCCCCCCCCHHHHHHHHHHC
Confidence 99876 5899999999999 9999998753211 000 1556899999999999
Q ss_pred CCcEEEEEecCC
Q 043585 270 GFTCCKITTMFG 281 (287)
Q Consensus 270 Gf~~~~~~~~~~ 281 (287)
||+++++.....
T Consensus 223 Gf~v~~~~~~~~ 234 (285)
T 4htf_A 223 GWQIMGKTGVRV 234 (285)
T ss_dssp TCEEEEEEEESS
T ss_pred CCceeeeeeEEE
Confidence 999998887654
No 61
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.11 E-value=1.1e-10 Score=100.66 Aligned_cols=115 Identities=15% Similarity=0.133 Sum_probs=91.5
Q ss_pred ccCcceEEEecCcc---------------cccc-hhhhhcCCC---CCCceeeeccCcc-cCC-------CCCeEEeccc
Q 043585 160 IERLGSMVDVGGGN---------------VLDL-PHAVANTPQ---TENLKYVADDMFQ-FIP-------PADAYFFMLF 212 (287)
Q Consensus 160 ~~~~~~vlDvGgG~---------------v~Dl-p~vi~~a~~---~~Ri~~~~gd~~~-~~p-------~~D~~~l~~v 212 (287)
.....+|||||||. .+|. |.+++.+++ ..+++++.+|+.+ +.+ .+|+|++..+
T Consensus 54 ~~~~~~vLD~GcG~G~~~~~la~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~v~~~~~ 133 (245)
T 3ggd_A 54 FNPELPLIDFACGNGTQTKFLSQFFPRVIGLDVSKSALEIAAKENTAANISYRLLDGLVPEQAAQIHSEIGDANIYMRTG 133 (245)
T ss_dssp SCTTSCEEEETCTTSHHHHHHHHHSSCEEEEESCHHHHHHHHHHSCCTTEEEEECCTTCHHHHHHHHHHHCSCEEEEESS
T ss_pred cCCCCeEEEEcCCCCHHHHHHHHhCCCEEEEECCHHHHHHHHHhCcccCceEEECcccccccccccccccCccEEEEcch
Confidence 35567999999999 5665 666766653 4589999999988 322 2899999999
Q ss_pred cccCChHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCC-----------CCC-------------CCCCHHHHHHHHHh
Q 043585 213 FHAFGGEDSLKILKKCREAIAGNGQRGKVLIMDIVINEK-----------EDE-------------DQRTDKEWKTLFLD 268 (287)
Q Consensus 213 lh~~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~-----------~~~-------------~~rt~~e~~~ll~~ 268 (287)
+|.+++++..++|+++++.|+| ||+++|++...++. +.+ ..++.+++.++|
T Consensus 134 ~~~~~~~~~~~~l~~~~~~Lkp---gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 208 (245)
T 3ggd_A 134 FHHIPVEKRELLGQSLRILLGK---QGAMYLIELGTGCIDFFNSLLEKYGQLPYELLLVMEHGIRPGIFTAEDIELYF-- 208 (245)
T ss_dssp STTSCGGGHHHHHHHHHHHHTT---TCEEEEEEECTTHHHHHHHHHHHHSSCCHHHHHHHTTTCCCCCCCHHHHHHHC--
T ss_pred hhcCCHHHHHHHHHHHHHHcCC---CCEEEEEeCCccccHHHHHHHhCCCCCchhhhhccccCCCCCccCHHHHHHHh--
Confidence 9999998899999999999999 99999999765421 111 346899999999
Q ss_pred CCCcEEEEEec
Q 043585 269 AGFTCCKITTM 279 (287)
Q Consensus 269 aGf~~~~~~~~ 279 (287)
+||+++.....
T Consensus 209 aGf~~~~~~~~ 219 (245)
T 3ggd_A 209 PDFEILSQGEG 219 (245)
T ss_dssp TTEEEEEEECC
T ss_pred CCCEEEecccc
Confidence 99999876544
No 62
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.11 E-value=1.6e-10 Score=102.00 Aligned_cols=120 Identities=14% Similarity=0.112 Sum_probs=91.7
Q ss_pred hhhcccccccCcceEEEecCcc---------------cccc-hhhhhcCCC-CCCceeeeccCcc-cCC-CCCeEEeccc
Q 043585 152 VKDCCRTLIERLGSMVDVGGGN---------------VLDL-PHAVANTPQ-TENLKYVADDMFQ-FIP-PADAYFFMLF 212 (287)
Q Consensus 152 ~~~~~~~~~~~~~~vlDvGgG~---------------v~Dl-p~vi~~a~~-~~Ri~~~~gd~~~-~~p-~~D~~~l~~v 212 (287)
++.+ ......+|||||||. .+|+ |.+++.+++ .++++++.+|+.. +.+ .+|+|++..+
T Consensus 50 ~~~l---~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~ 126 (279)
T 3ccf_A 50 LQLL---NPQPGEFILDLGCGTGQLTEKIAQSGAEVLGTDNAATMIEKARQNYPHLHFDVADARNFRVDKPLDAVFSNAM 126 (279)
T ss_dssp HHHH---CCCTTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTSCEEECCTTTCCCSSCEEEEEEESC
T ss_pred HHHh---CCCCCCEEEEecCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHhhCCCCEEEECChhhCCcCCCcCEEEEcch
Confidence 4445 345678999999998 4565 566666654 4789999999987 444 4999999999
Q ss_pred cccCChHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCC---------------------C-CCCCCHHHHHHHHHhCC
Q 043585 213 FHAFGGEDSLKILKKCREAIAGNGQRGKVLIMDIVINEKE---------------------D-EDQRTDKEWKTLFLDAG 270 (287)
Q Consensus 213 lh~~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~---------------------~-~~~rt~~e~~~ll~~aG 270 (287)
+|.++|. ..+|+++++.|+| ||++++......... . ...++.++|.++|+++|
T Consensus 127 l~~~~d~--~~~l~~~~~~Lkp---gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG 201 (279)
T 3ccf_A 127 LHWVKEP--EAAIASIHQALKS---GGRFVAEFGGKGNIKYILEALYNALETLGIHNPQALNPWYFPSIGEYVNILEKQG 201 (279)
T ss_dssp GGGCSCH--HHHHHHHHHHEEE---EEEEEEEEECTTTTHHHHHHHHHHHHHHTCCCGGGGCCCCCCCHHHHHHHHHHHT
T ss_pred hhhCcCH--HHHHHHHHHhcCC---CcEEEEEecCCcchHHHHHHHHHHHHhcCCccccCcCceeCCCHHHHHHHHHHcC
Confidence 9999875 4899999999999 999998765432200 0 03458999999999999
Q ss_pred CcEEEEEec
Q 043585 271 FTCCKITTM 279 (287)
Q Consensus 271 f~~~~~~~~ 279 (287)
|+++++...
T Consensus 202 f~~~~~~~~ 210 (279)
T 3ccf_A 202 FDVTYAALF 210 (279)
T ss_dssp EEEEEEEEE
T ss_pred CEEEEEEEe
Confidence 998876644
No 63
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.11 E-value=4.4e-10 Score=98.26 Aligned_cols=114 Identities=12% Similarity=0.182 Sum_probs=91.2
Q ss_pred cccCcceEEEecCcc---------------cccc-hhhhhcCCCCCCceeeeccCcc-cCC--CCCeEEeccccccCChH
Q 043585 159 LIERLGSMVDVGGGN---------------VLDL-PHAVANTPQTENLKYVADDMFQ-FIP--PADAYFFMLFFHAFGGE 219 (287)
Q Consensus 159 ~~~~~~~vlDvGgG~---------------v~Dl-p~vi~~a~~~~Ri~~~~gd~~~-~~p--~~D~~~l~~vlh~~~d~ 219 (287)
......+|||||||. .+|+ |.+++.++...+++++.+|+.+ +++ .+|+|++.+++|++++.
T Consensus 31 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~ 110 (261)
T 3ege_A 31 NLPKGSVIADIGAGTGGYSVALANQGLFVYAVEPSIVMRQQAVVHPQVEWFTGYAENLALPDKSVDGVISILAIHHFSHL 110 (261)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHTTTCEEEEECSCHHHHHSSCCCTTEEEECCCTTSCCSCTTCBSEEEEESCGGGCSSH
T ss_pred CCCCCCEEEEEcCcccHHHHHHHhCCCEEEEEeCCHHHHHHHHhccCCEEEECchhhCCCCCCCEeEEEEcchHhhccCH
Confidence 345678999999998 6776 7788888776699999999988 555 49999999999999664
Q ss_pred HHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCCC---------------CCCCHHHHHHHHHhCCCcEEEEEec
Q 043585 220 DSLKILKKCREAIAGNGQRGKVLIMDIVINEKEDE---------------DQRTDKEWKTLFLDAGFTCCKITTM 279 (287)
Q Consensus 220 ~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~---------------~~rt~~e~~~ll~~aGf~~~~~~~~ 279 (287)
.++|+++++.|+ ||++++.+...+..... ..++.+++. +|+++||+.+++...
T Consensus 111 --~~~l~~~~~~Lk----gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~aGF~~v~~~~~ 178 (261)
T 3ege_A 111 --EKSFQEMQRIIR----DGTIVLLTFDIRLAQRIWLYDYFPFLWEDALRFLPLDEQIN-LLQENTKRRVEAIPF 178 (261)
T ss_dssp --HHHHHHHHHHBC----SSCEEEEEECGGGCCCCGGGGTCHHHHHHHHTSCCHHHHHH-HHHHHHCSEEEEEEC
T ss_pred --HHHHHHHHHHhC----CcEEEEEEcCCchhHHHHHHHHHHHHhhhhhhhCCCHHHHH-HHHHcCCCceeEEEe
Confidence 589999999999 48999988754332211 345678888 999999998887765
No 64
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.11 E-value=1.3e-10 Score=99.64 Aligned_cols=115 Identities=12% Similarity=0.126 Sum_probs=88.0
Q ss_pred CcceEEEecCcc---------------cccc-hhhhhcCCC-----CCCceeeeccCcc-cCC-CCCeEEecc-ccccC-
Q 043585 162 RLGSMVDVGGGN---------------VLDL-PHAVANTPQ-----TENLKYVADDMFQ-FIP-PADAYFFML-FFHAF- 216 (287)
Q Consensus 162 ~~~~vlDvGgG~---------------v~Dl-p~vi~~a~~-----~~Ri~~~~gd~~~-~~p-~~D~~~l~~-vlh~~- 216 (287)
...+|||||||. .+|. |.+++.+++ ..+++++.+|+.+ +.+ .+|+|++.. +||++
T Consensus 37 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~~l~~~~ 116 (246)
T 1y8c_A 37 VFDDYLDLACGTGNLTENLCPKFKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNLNINRKFDLITCCLDSTNYII 116 (246)
T ss_dssp CTTEEEEETCTTSTTHHHHGGGSSEEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGCCCSCCEEEEEECTTGGGGCC
T ss_pred CCCeEEEeCCCCCHHHHHHHHCCCcEEEEECCHHHHHHHHHHHhhcCCCeEEEecccccCCccCCceEEEEcCccccccC
Confidence 567999999998 5665 666666653 2389999999988 454 499999998 99998
Q ss_pred ChHHHHHHHHHHHHHhcCCCCCcEEEEEeecc-------C---------------------------------CCCC---
Q 043585 217 GGEDSLKILKKCREAIAGNGQRGKVLIMDIVI-------N---------------------------------EKED--- 253 (287)
Q Consensus 217 ~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~-------~---------------------------------~~~~--- 253 (287)
++++..++|+++++.|+| ||++++.-... + ..+.
T Consensus 117 ~~~~~~~~l~~~~~~L~p---gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (246)
T 1y8c_A 117 DSDDLKKYFKAVSNHLKE---GGVFIFDINSYYKLSQVLGNNDFNYDDDEVFYYWENQFEDDLVSMYISFFVRDGEFYKR 193 (246)
T ss_dssp SHHHHHHHHHHHHTTEEE---EEEEEEEEECHHHHHTTTTTCCEEEEETTEEEEEEEEEETTEEEEEEEEEEECSSSEEE
T ss_pred CHHHHHHHHHHHHHhcCC---CcEEEEEecCHHHHHhhcCcceEEecCCcEEEEEecccCCceEEEEEEEEEecCCcccc
Confidence 457789999999999999 89888722110 0 0000
Q ss_pred ------CCCCCHHHHHHHHHhCCCcEEEEEec
Q 043585 254 ------EDQRTDKEWKTLFLDAGFTCCKITTM 279 (287)
Q Consensus 254 ------~~~rt~~e~~~ll~~aGf~~~~~~~~ 279 (287)
.+.+|.++|.++|+++||+++++...
T Consensus 194 ~~~~~~~~~~~~~~l~~ll~~aGf~~~~~~~~ 225 (246)
T 1y8c_A 194 FDEEHEERAYKEEDIEKYLKHGQLNILDKVDC 225 (246)
T ss_dssp EEEEEEEECCCHHHHHHHHHHTTEEEEEEEES
T ss_pred cEEEEEEEcCCHHHHHHHHHHCCCeEEEEEcc
Confidence 03459999999999999999998754
No 65
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.10 E-value=7.4e-11 Score=103.68 Aligned_cols=116 Identities=13% Similarity=0.320 Sum_probs=89.7
Q ss_pred cccCcceEEEecCcc-----------------cccc-hhhhhcCCC------CCCceeeeccCcc-cCC--CCCeEEecc
Q 043585 159 LIERLGSMVDVGGGN-----------------VLDL-PHAVANTPQ------TENLKYVADDMFQ-FIP--PADAYFFML 211 (287)
Q Consensus 159 ~~~~~~~vlDvGgG~-----------------v~Dl-p~vi~~a~~------~~Ri~~~~gd~~~-~~p--~~D~~~l~~ 211 (287)
.+....+|||||||. .+|. |.+++.+++ .++++++.+|+.+ +++ .+|+|++..
T Consensus 34 ~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~ 113 (276)
T 3mgg_A 34 VYPPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGIKNVKFLQANIFSLPFEDSSFDHIFVCF 113 (276)
T ss_dssp CCCTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGCCSCTTCEEEEEEES
T ss_pred cCCCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccccCCCCCCCeeEEEEec
Confidence 346678999999999 4565 556665543 3579999999998 554 499999999
Q ss_pred ccccCChHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCC-----CCC-----------------CCCCHHHHHHHHHhC
Q 043585 212 FFHAFGGEDSLKILKKCREAIAGNGQRGKVLIMDIVINEK-----EDE-----------------DQRTDKEWKTLFLDA 269 (287)
Q Consensus 212 vlh~~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~-----~~~-----------------~~rt~~e~~~ll~~a 269 (287)
++|++++.+ .+|+++++.|+| ||.+++.+...... ... ..++..++.++|+++
T Consensus 114 ~l~~~~~~~--~~l~~~~~~L~p---gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~a 188 (276)
T 3mgg_A 114 VLEHLQSPE--EALKSLKKVLKP---GGTITVIEGDHGSCYFHPEGKKAIEAWNCLIRVQAYMKGNSLVGRQIYPLLQES 188 (276)
T ss_dssp CGGGCSCHH--HHHHHHHHHEEE---EEEEEEEEECGGGCEEESCCHHHHHHHHHHHHHHHHTTCCTTGGGGHHHHHHHT
T ss_pred hhhhcCCHH--HHHHHHHHHcCC---CcEEEEEEcCCCCceECCCcHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHC
Confidence 999998864 899999999999 99999988543211 100 335668999999999
Q ss_pred CCcEEEEEec
Q 043585 270 GFTCCKITTM 279 (287)
Q Consensus 270 Gf~~~~~~~~ 279 (287)
||+++++...
T Consensus 189 Gf~~v~~~~~ 198 (276)
T 3mgg_A 189 GFEKIRVEPR 198 (276)
T ss_dssp TCEEEEEEEE
T ss_pred CCCeEEEeeE
Confidence 9998877654
No 66
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.07 E-value=1e-10 Score=99.09 Aligned_cols=114 Identities=15% Similarity=0.100 Sum_probs=88.3
Q ss_pred ccCcceEEEecCcc---------------cccc-hhhhhcCCCCCCceeeeccCccc-----CC-C-CCeEEeccccccC
Q 043585 160 IERLGSMVDVGGGN---------------VLDL-PHAVANTPQTENLKYVADDMFQF-----IP-P-ADAYFFMLFFHAF 216 (287)
Q Consensus 160 ~~~~~~vlDvGgG~---------------v~Dl-p~vi~~a~~~~Ri~~~~gd~~~~-----~p-~-~D~~~l~~vlh~~ 216 (287)
.....+|||||||. .+|. |.+++.+++..++++..+|+.+. .+ . +|+|++..++| +
T Consensus 50 ~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~~~l~-~ 128 (227)
T 3e8s_A 50 GRQPERVLDLGCGEGWLLRALADRGIEAVGVDGDRTLVDAARAAGAGEVHLASYAQLAEAKVPVGKDYDLICANFALL-H 128 (227)
T ss_dssp HTCCSEEEEETCTTCHHHHHHHTTTCEEEEEESCHHHHHHHHHTCSSCEEECCHHHHHTTCSCCCCCEEEEEEESCCC-S
T ss_pred cCCCCEEEEeCCCCCHHHHHHHHCCCEEEEEcCCHHHHHHHHHhcccccchhhHHhhcccccccCCCccEEEECchhh-h
Confidence 34568999999999 5666 66777776667888888887663 12 3 99999999999 5
Q ss_pred ChHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCCC-----------------------CCCCHHHHHHHHHhCCCcE
Q 043585 217 GGEDSLKILKKCREAIAGNGQRGKVLIMDIVINEKEDE-----------------------DQRTDKEWKTLFLDAGFTC 273 (287)
Q Consensus 217 ~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~-----------------------~~rt~~e~~~ll~~aGf~~ 273 (287)
.+ ...+|+++++.|+| ||++++.+......... ..+|.++|.++|+++||++
T Consensus 129 ~~--~~~~l~~~~~~L~p---gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~ 203 (227)
T 3e8s_A 129 QD--IIELLSAMRTLLVP---GGALVIQTLHPWSVADGDYQDGWREESFAGFAGDWQPMPWYFRTLASWLNALDMAGLRL 203 (227)
T ss_dssp SC--CHHHHHHHHHTEEE---EEEEEEEECCTTTTCTTCCSCEEEEECCTTSSSCCCCEEEEECCHHHHHHHHHHTTEEE
T ss_pred hh--HHHHHHHHHHHhCC---CeEEEEEecCccccCccccccccchhhhhccccCcccceEEEecHHHHHHHHHHcCCeE
Confidence 54 35899999999999 99999987644322110 2359999999999999999
Q ss_pred EEEEec
Q 043585 274 CKITTM 279 (287)
Q Consensus 274 ~~~~~~ 279 (287)
+++...
T Consensus 204 ~~~~~~ 209 (227)
T 3e8s_A 204 VSLQEP 209 (227)
T ss_dssp EEEECC
T ss_pred EEEecC
Confidence 988763
No 67
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.07 E-value=3.9e-10 Score=95.90 Aligned_cols=111 Identities=13% Similarity=0.114 Sum_probs=87.1
Q ss_pred cceEEEecCcc-----------cccc-hhhhhcCCCCCCceeeeccCcc-cCC--CCCeEEeccccccCChHHHHHHHHH
Q 043585 163 LGSMVDVGGGN-----------VLDL-PHAVANTPQTENLKYVADDMFQ-FIP--PADAYFFMLFFHAFGGEDSLKILKK 227 (287)
Q Consensus 163 ~~~vlDvGgG~-----------v~Dl-p~vi~~a~~~~Ri~~~~gd~~~-~~p--~~D~~~l~~vlh~~~d~~~~~iL~~ 227 (287)
..+|||||||. .+|. +.+++.+++. +++++.+|+.+ +++ .+|+|++..+||++++. ..+|++
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~~~vD~s~~~~~~a~~~-~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~--~~~l~~ 124 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIKIGVEPSERMAEIARKR-GVFVLKGTAENLPLKDESFDFALMVTTICFVDDP--ERALKE 124 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCCEEEESCHHHHHHHHHT-TCEEEECBTTBCCSCTTCEEEEEEESCGGGSSCH--HHHHHH
T ss_pred CCcEEEeCCCCCHHHHHHHHHhccCCCHHHHHHHHhc-CCEEEEcccccCCCCCCCeeEEEEcchHhhccCH--HHHHHH
Confidence 67999999998 3454 5555555544 79999999877 554 49999999999999765 589999
Q ss_pred HHHHhcCCCCCcEEEEEeeccCCC----------C-----CCCCCCHHHHHHHHHhCCCcEEEEEec
Q 043585 228 CREAIAGNGQRGKVLIMDIVINEK----------E-----DEDQRTDKEWKTLFLDAGFTCCKITTM 279 (287)
Q Consensus 228 ~~~al~~~~~~g~lli~e~~~~~~----------~-----~~~~rt~~e~~~ll~~aGf~~~~~~~~ 279 (287)
+++.|+| ||++++.+...... . ....++.++|.++|+++||+++++...
T Consensus 125 ~~~~L~p---gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~~~~~~~ 188 (219)
T 1vlm_A 125 AYRILKK---GGYLIVGIVDRESFLGREYEKNKEKSVFYKNARFFSTEELMDLMRKAGFEEFKVVQT 188 (219)
T ss_dssp HHHHEEE---EEEEEEEEECSSSHHHHHHHHTTTC-CCSTTCCCCCHHHHHHHHHHTTCEEEEEEEE
T ss_pred HHHHcCC---CcEEEEEEeCCccHHHHHHHHHhcCcchhcccccCCHHHHHHHHHHCCCeEEEEecc
Confidence 9999999 99999887543211 0 014579999999999999999888765
No 68
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.06 E-value=3.5e-10 Score=99.03 Aligned_cols=115 Identities=9% Similarity=-0.047 Sum_probs=89.4
Q ss_pred cCcceEEEecCcc---------------cccc-hhhhhcCCC-----------------------CCCceeeeccCcc-c
Q 043585 161 ERLGSMVDVGGGN---------------VLDL-PHAVANTPQ-----------------------TENLKYVADDMFQ-F 200 (287)
Q Consensus 161 ~~~~~vlDvGgG~---------------v~Dl-p~vi~~a~~-----------------------~~Ri~~~~gd~~~-~ 200 (287)
....+|||+|||. .+|+ |.+++.|++ ..+|+++.+|+++ +
T Consensus 67 ~~~~~vLD~GCG~G~~~~~La~~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~l~ 146 (252)
T 2gb4_A 67 QSGLRVFFPLCGKAIEMKWFADRGHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDLP 146 (252)
T ss_dssp CCSCEEEETTCTTCTHHHHHHHTTCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTTGG
T ss_pred CCCCeEEEeCCCCcHHHHHHHHCCCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccccCC
Confidence 3567999999999 5776 666666531 2689999999999 4
Q ss_pred C---CCCCeEEeccccccCChHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCC---CCCCCCCHHHHHHHHHhCCCcEE
Q 043585 201 I---PPADAYFFMLFFHAFGGEDSLKILKKCREAIAGNGQRGKVLIMDIVINEK---EDEDQRTDKEWKTLFLDAGFTCC 274 (287)
Q Consensus 201 ~---p~~D~~~l~~vlh~~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~---~~~~~rt~~e~~~ll~~aGf~~~ 274 (287)
. ..||+|+.+.+||..++++..++++++++.|+| ||+++++....+.. +++...+.+|+.++|+. +|+++
T Consensus 147 ~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~Lkp---GG~l~l~~~~~~~~~~~g~~~~~~~~el~~~l~~-~f~v~ 222 (252)
T 2gb4_A 147 RANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRK---EFQYLVAVLSYDPTKHAGPPFYVPSAELKRLFGT-KCSMQ 222 (252)
T ss_dssp GGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEE---EEEEEEEEEECCTTSCCCSSCCCCHHHHHHHHTT-TEEEE
T ss_pred cccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCC---CeEEEEEEEecCCccCCCCCCCCCHHHHHHHhhC-CeEEE
Confidence 3 249999999999999988888999999999999 99997665443322 11244689999999988 59987
Q ss_pred EEEec
Q 043585 275 KITTM 279 (287)
Q Consensus 275 ~~~~~ 279 (287)
.....
T Consensus 223 ~~~~~ 227 (252)
T 2gb4_A 223 CLEEV 227 (252)
T ss_dssp EEEEE
T ss_pred EEecc
Confidence 76644
No 69
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.05 E-value=2.7e-10 Score=95.59 Aligned_cols=113 Identities=10% Similarity=0.086 Sum_probs=89.3
Q ss_pred cCcceEEEecCcc----------------cccc-hhhhhcCCC-----CCCceeeeccCcc-cCC--CCCeEEecccccc
Q 043585 161 ERLGSMVDVGGGN----------------VLDL-PHAVANTPQ-----TENLKYVADDMFQ-FIP--PADAYFFMLFFHA 215 (287)
Q Consensus 161 ~~~~~vlDvGgG~----------------v~Dl-p~vi~~a~~-----~~Ri~~~~gd~~~-~~p--~~D~~~l~~vlh~ 215 (287)
....+|||||||. .+|. +.+++.+++ ..+++++.+|+.+ +++ .+|+|++..++|+
T Consensus 22 ~~~~~vLDiGcG~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 101 (209)
T 2p8j_A 22 NLDKTVLDCGAGGDLPPLSIFVEDGYKTYGIEISDLQLKKAENFSRENNFKLNISKGDIRKLPFKDESMSFVYSYGTIFH 101 (209)
T ss_dssp SSCSEEEEESCCSSSCTHHHHHHTTCEEEEEECCHHHHHHHHHHHHHHTCCCCEEECCTTSCCSCTTCEEEEEECSCGGG
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEECchhhCCCCCCceeEEEEcChHHh
Confidence 4467999999998 4454 555555543 4689999999988 554 4999999999999
Q ss_pred CChHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCCC---------------------CCCCHHHHHHHHHhCCCcEE
Q 043585 216 FGGEDSLKILKKCREAIAGNGQRGKVLIMDIVINEKEDE---------------------DQRTDKEWKTLFLDAGFTCC 274 (287)
Q Consensus 216 ~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~---------------------~~rt~~e~~~ll~~aGf~~~ 274 (287)
++.++..++|+++++.|+| ||++++.+...++.... ...+.+|+.++|+++||...
T Consensus 102 ~~~~~~~~~l~~~~~~Lkp---gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~g~~~~ 178 (209)
T 2p8j_A 102 MRKNDVKEAIDEIKRVLKP---GGLACINFLTTKDERYNKGEKIGEGEFLQLERGEKVIHSYVSLEEADKYFKDMKVLFK 178 (209)
T ss_dssp SCHHHHHHHHHHHHHHEEE---EEEEEEEEEETTSTTTTCSEEEETTEEEECC-CCCEEEEEECHHHHHHTTTTSEEEEE
T ss_pred CCHHHHHHHHHHHHHHcCC---CcEEEEEEecccchhccchhhhccccceeccCCCceeEEecCHHHHHHHHhhcCceee
Confidence 9888899999999999999 99999988765443210 34589999999999999765
Q ss_pred EE
Q 043585 275 KI 276 (287)
Q Consensus 275 ~~ 276 (287)
+.
T Consensus 179 ~~ 180 (209)
T 2p8j_A 179 ED 180 (209)
T ss_dssp EE
T ss_pred ee
Confidence 43
No 70
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.04 E-value=4.5e-10 Score=95.21 Aligned_cols=112 Identities=9% Similarity=0.023 Sum_probs=84.2
Q ss_pred cCcceEEEecCcc-----------------cccc-hhhhhcCCC-----------CCCceeeeccCcc-cCC--CCCeEE
Q 043585 161 ERLGSMVDVGGGN-----------------VLDL-PHAVANTPQ-----------TENLKYVADDMFQ-FIP--PADAYF 208 (287)
Q Consensus 161 ~~~~~vlDvGgG~-----------------v~Dl-p~vi~~a~~-----------~~Ri~~~~gd~~~-~~p--~~D~~~ 208 (287)
.+..+|||||||. .+|. |.+++.+++ ..+++++.+|+.. +.+ .+|+|+
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~ 107 (217)
T 3jwh_A 28 SNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQDKRFHGYDAAT 107 (217)
T ss_dssp TTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSCCGGGCSCSEEE
T ss_pred cCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcccccccCCCcCEEe
Confidence 4567999999999 5665 566666543 1289999999866 333 599999
Q ss_pred eccccccCChHHHHHHHHHHHHHhcCCCCCcEEEEEeecc--------CCCC---C--CCCCCHHHHH----HHHHhCCC
Q 043585 209 FMLFFHAFGGEDSLKILKKCREAIAGNGQRGKVLIMDIVI--------NEKE---D--EDQRTDKEWK----TLFLDAGF 271 (287)
Q Consensus 209 l~~vlh~~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~--------~~~~---~--~~~rt~~e~~----~ll~~aGf 271 (287)
+..++|++++++..++|+++++.|+| ||.+++..... +... . ...++.+++. ++++++||
T Consensus 108 ~~~~l~~~~~~~~~~~l~~~~~~Lkp---gG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~Gf 184 (217)
T 3jwh_A 108 VIEVIEHLDLSRLGAFERVLFEFAQP---KIVIVTTPNIEYNVKFANLPAGKLRHKDHRFEWTRSQFQNWANKITERFAY 184 (217)
T ss_dssp EESCGGGCCHHHHHHHHHHHHTTTCC---SEEEEEEEBHHHHHHTC-----------CCSCBCHHHHHHHHHHHHHHSSE
T ss_pred eHHHHHcCCHHHHHHHHHHHHHHcCC---CEEEEEccCcccchhhcccccccccccccccccCHHHHHHHHHHHHHHcCc
Confidence 99999999999889999999999999 88776655431 1000 0 0456899999 88889999
Q ss_pred cEEE
Q 043585 272 TCCK 275 (287)
Q Consensus 272 ~~~~ 275 (287)
+++-
T Consensus 185 ~v~~ 188 (217)
T 3jwh_A 185 NVQF 188 (217)
T ss_dssp EEEE
T ss_pred eEEE
Confidence 8754
No 71
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.04 E-value=6.7e-10 Score=94.16 Aligned_cols=113 Identities=11% Similarity=0.059 Sum_probs=83.6
Q ss_pred cCcceEEEecCcc-----------------cccc-hhhhhcCCC-------C----CCceeeeccCcc-cCC--CCCeEE
Q 043585 161 ERLGSMVDVGGGN-----------------VLDL-PHAVANTPQ-------T----ENLKYVADDMFQ-FIP--PADAYF 208 (287)
Q Consensus 161 ~~~~~vlDvGgG~-----------------v~Dl-p~vi~~a~~-------~----~Ri~~~~gd~~~-~~p--~~D~~~ 208 (287)
.+..+|||||||. .+|. |.+++.+++ . .+++++.+|+.. +.+ .+|+|+
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~ 107 (219)
T 3jwg_A 28 VNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYRDKRFSGYDAAT 107 (219)
T ss_dssp TTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSCCGGGTTCSEEE
T ss_pred cCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCcccccccccCCCCEEE
Confidence 4567999999999 4565 566666653 1 289999999966 332 599999
Q ss_pred eccccccCChHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCC-----CCC--------CCCCCHHHHH----HHHHhCCC
Q 043585 209 FMLFFHAFGGEDSLKILKKCREAIAGNGQRGKVLIMDIVINE-----KED--------EDQRTDKEWK----TLFLDAGF 271 (287)
Q Consensus 209 l~~vlh~~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~-----~~~--------~~~rt~~e~~----~ll~~aGf 271 (287)
+..++|++++++..++|+++++.|+| ||.+++....... ... ....+.+++. ++++++||
T Consensus 108 ~~~~l~~~~~~~~~~~l~~~~~~Lkp---gG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~Gf 184 (219)
T 3jwg_A 108 VIEVIEHLDENRLQAFEKVLFEFTRP---QTVIVSTPNKEYNFHYGNLFEGNLRHRDHRFEWTRKEFQTWAVKVAEKYGY 184 (219)
T ss_dssp EESCGGGCCHHHHHHHHHHHHTTTCC---SEEEEEEEBGGGGGCCCCT-----GGGCCTTSBCHHHHHHHHHHHHHHHTE
T ss_pred EHHHHHhCCHHHHHHHHHHHHHhhCC---CEEEEEccchhhhhhhcccCcccccccCceeeecHHHHHHHHHHHHHHCCc
Confidence 99999999999889999999999999 8866554432110 000 0445899999 77888899
Q ss_pred cEEEE
Q 043585 272 TCCKI 276 (287)
Q Consensus 272 ~~~~~ 276 (287)
++.-.
T Consensus 185 ~v~~~ 189 (219)
T 3jwg_A 185 SVRFL 189 (219)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 76543
No 72
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.02 E-value=6e-10 Score=98.49 Aligned_cols=118 Identities=14% Similarity=0.097 Sum_probs=91.1
Q ss_pred ccCcceEEEecCcc----------------cccc-hhhhhcCCC-------CCCceeeeccCcc-cC-C--CCCeEEecc
Q 043585 160 IERLGSMVDVGGGN----------------VLDL-PHAVANTPQ-------TENLKYVADDMFQ-FI-P--PADAYFFML 211 (287)
Q Consensus 160 ~~~~~~vlDvGgG~----------------v~Dl-p~vi~~a~~-------~~Ri~~~~gd~~~-~~-p--~~D~~~l~~ 211 (287)
.....+|||||||. .+|. |.+++.+++ ..+++++.+|+.+ ++ + .+|+|++..
T Consensus 62 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~ 141 (298)
T 1ri5_A 62 TKRGDSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMDLGKEFDVISSQF 141 (298)
T ss_dssp CCTTCEEEEETCTTTTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCCSSCEEEEEEES
T ss_pred CCCCCeEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccccCCCCCcCEEEECc
Confidence 35668999999998 4555 555665543 2579999999988 55 3 499999999
Q ss_pred cccc--CChHHHHHHHHHHHHHhcCCCCCcEEEEEeeccC---------------------------C-CCC--------
Q 043585 212 FFHA--FGGEDSLKILKKCREAIAGNGQRGKVLIMDIVIN---------------------------E-KED-------- 253 (287)
Q Consensus 212 vlh~--~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~---------------------------~-~~~-------- 253 (287)
++|+ .+.++...+|+++++.|+| ||++++..+... . .+.
T Consensus 142 ~l~~~~~~~~~~~~~l~~~~~~Lkp---gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~ 218 (298)
T 1ri5_A 142 SFHYAFSTSESLDIAQRNIARHLRP---GGYFIMTVPSRDVILERYKQGRMSNDFYKIELEKMEDVPMESVREYRFTLLD 218 (298)
T ss_dssp CGGGGGSSHHHHHHHHHHHHHTEEE---EEEEEEEEECHHHHHHHHHHTCCBCSSEEEECCCCSSCCTTTCCEEEEEETT
T ss_pred hhhhhcCCHHHHHHHHHHHHHhcCC---CCEEEEEECCHHHHHHHHccCccCCeeEEEEeCccccccccccceEEEEEch
Confidence 9998 6788889999999999999 999998764321 0 000
Q ss_pred ------CCCCCHHHHHHHHHhCCCcEEEEEecC
Q 043585 254 ------EDQRTDKEWKTLFLDAGFTCCKITTMF 280 (287)
Q Consensus 254 ------~~~rt~~e~~~ll~~aGf~~~~~~~~~ 280 (287)
...++.+++.++|+++||+++++....
T Consensus 219 ~~~~~~~~~~~~~~l~~ll~~aGf~~v~~~~~~ 251 (298)
T 1ri5_A 219 SVNNCIEYFVDFTRMVDGFKRLGLSLVERKGFI 251 (298)
T ss_dssp SCSSEEEECCCHHHHHHHHHTTTEEEEEEEEHH
T ss_pred hhcCCcccccCHHHHHHHHHHcCCEEEEecCHH
Confidence 034588999999999999999987764
No 73
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.02 E-value=8.4e-10 Score=93.52 Aligned_cols=114 Identities=17% Similarity=0.222 Sum_probs=85.5
Q ss_pred cCcceEEEecCcc---------------cccc-hhhhhcCCCCCCceeeeccCcc---cCC--CCCeEEeccccccCChH
Q 043585 161 ERLGSMVDVGGGN---------------VLDL-PHAVANTPQTENLKYVADDMFQ---FIP--PADAYFFMLFFHAFGGE 219 (287)
Q Consensus 161 ~~~~~vlDvGgG~---------------v~Dl-p~vi~~a~~~~Ri~~~~gd~~~---~~p--~~D~~~l~~vlh~~~d~ 219 (287)
....+|||||||. .+|. +.+++.+++.- .++..+|+.+ +++ .+|+|++..++|++++.
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~D~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~~~~fD~v~~~~~l~~~~~~ 109 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKENGTRVSGIEAFPEAAEQAKEKL-DHVVLGDIETMDMPYEEEQFDCVIFGDVLEHLFDP 109 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHTTTCEEEEEESSHHHHHHHHTTS-SEEEESCTTTCCCCSCTTCEEEEEEESCGGGSSCH
T ss_pred cCCCcEEEeCCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHHhC-CcEEEcchhhcCCCCCCCccCEEEECChhhhcCCH
Confidence 5678999999998 4554 45555554321 3788888875 233 49999999999999876
Q ss_pred HHHHHHHHHHHHhcCCCCCcEEEEEeeccCC----------C-C----------CCCCCCHHHHHHHHHhCCCcEEEEEe
Q 043585 220 DSLKILKKCREAIAGNGQRGKVLIMDIVINE----------K-E----------DEDQRTDKEWKTLFLDAGFTCCKITT 278 (287)
Q Consensus 220 ~~~~iL~~~~~al~~~~~~g~lli~e~~~~~----------~-~----------~~~~rt~~e~~~ll~~aGf~~~~~~~ 278 (287)
..+|+++++.|+| ||.+++..+.... . . ....+|.++|.++|+++||+++++..
T Consensus 110 --~~~l~~~~~~L~~---gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 184 (230)
T 3cc8_A 110 --WAVIEKVKPYIKQ---NGVILASIPNVSHISVLAPLLAGNWTYTEYGLLDKTHIRFFTFNEMLRMFLKAGYSISKVDR 184 (230)
T ss_dssp --HHHHHHTGGGEEE---EEEEEEEEECTTSHHHHHHHHTTCCCCBSSSTTBTTCCCCCCHHHHHHHHHHTTEEEEEEEE
T ss_pred --HHHHHHHHHHcCC---CCEEEEEeCCcchHHHHHHHhcCCceeccCCCCCcceEEEecHHHHHHHHHHcCCeEEEEEe
Confidence 4899999999999 9999987654211 0 0 00457999999999999999988887
Q ss_pred cC
Q 043585 279 MF 280 (287)
Q Consensus 279 ~~ 280 (287)
..
T Consensus 185 ~~ 186 (230)
T 3cc8_A 185 VY 186 (230)
T ss_dssp EE
T ss_pred cc
Confidence 53
No 74
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.01 E-value=2.2e-10 Score=101.58 Aligned_cols=114 Identities=15% Similarity=0.187 Sum_probs=86.0
Q ss_pred cccCcceEEEecCcc------------------cccc-hhhhhcCCC-----CCCceeeeccCcc-cCC-CCCeEEeccc
Q 043585 159 LIERLGSMVDVGGGN------------------VLDL-PHAVANTPQ-----TENLKYVADDMFQ-FIP-PADAYFFMLF 212 (287)
Q Consensus 159 ~~~~~~~vlDvGgG~------------------v~Dl-p~vi~~a~~-----~~Ri~~~~gd~~~-~~p-~~D~~~l~~v 212 (287)
...+..+|||||||. .+|+ |..++.+++ ..+++++.+|+.+ +.+ .+|+|++..+
T Consensus 19 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~ 98 (284)
T 3gu3_A 19 KITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDATEIELNDKYDIAICHAF 98 (284)
T ss_dssp CCCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSSEEEEEESCTTTCCCSSCEEEEEEESC
T ss_pred ccCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEcchhhcCcCCCeeEEEECCh
Confidence 345678999999999 3444 444544432 3389999999998 455 4999999999
Q ss_pred cccCChHHHHHHHHHHHHHhcCCCCCcEEEEEeecc--------CCCCC-----C-----------------CCCCHHHH
Q 043585 213 FHAFGGEDSLKILKKCREAIAGNGQRGKVLIMDIVI--------NEKED-----E-----------------DQRTDKEW 262 (287)
Q Consensus 213 lh~~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~--------~~~~~-----~-----------------~~rt~~e~ 262 (287)
+|++++. .++|+++++.|+| ||.+++.++.. .+... . ...+..++
T Consensus 99 l~~~~~~--~~~l~~~~~~Lkp---gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 173 (284)
T 3gu3_A 99 LLHMTTP--ETMLQKMIHSVKK---GGKIICFEPHWISNMASYLLDGEKQSEFIQLGVLQKLFESDTQRNGKDGNIGMKI 173 (284)
T ss_dssp GGGCSSH--HHHHHHHHHTEEE---EEEEEEEECCHHHHHHSEEETTSCHHHHCCHHHHHHHHHHHHHHTCCCTTGGGTH
T ss_pred hhcCCCH--HHHHHHHHHHcCC---CCEEEEEecchhcccccceecCcchhhccchHHHHHHHHHHhhhhcccccHHHHH
Confidence 9999876 4899999999999 99999988651 11110 0 23456789
Q ss_pred HHHHHhCCCcEEEEE
Q 043585 263 KTLFLDAGFTCCKIT 277 (287)
Q Consensus 263 ~~ll~~aGf~~~~~~ 277 (287)
.++|++|||+.+++.
T Consensus 174 ~~~l~~aGF~~v~~~ 188 (284)
T 3gu3_A 174 PIYLSELGVKNIECR 188 (284)
T ss_dssp HHHHHHTTCEEEEEE
T ss_pred HHHHHHcCCCeEEEE
Confidence 999999999988764
No 75
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.01 E-value=1.1e-10 Score=104.06 Aligned_cols=89 Identities=10% Similarity=0.218 Sum_probs=66.3
Q ss_pred CCceeeeccCcccC------C--CCCeEEecccccc----CChHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCC---CC
Q 043585 188 ENLKYVADDMFQFI------P--PADAYFFMLFFHA----FGGEDSLKILKKCREAIAGNGQRGKVLIMDIVINE---KE 252 (287)
Q Consensus 188 ~Ri~~~~gd~~~~~------p--~~D~~~l~~vlh~----~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~---~~ 252 (287)
.+|+|+.+|+.... + .||+|++..++|. |++++..++|+++++.|+| ||+|++-...... ..
T Consensus 154 ~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~~~~~~Lkp---GG~lil~~~~~~~y~~~~ 230 (292)
T 3g07_A 154 NNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMFRRIYRHLRP---GGILVLEPQPWSSYGKRK 230 (292)
T ss_dssp TTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEEECCCHHHHHTTT
T ss_pred ccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHHHHHHHHhCC---CcEEEEecCCchhhhhhh
Confidence 58999999998632 2 4999999999844 4888999999999999999 8888875332110 00
Q ss_pred C-C---------CCCCHHHHHHHHHh--CCCcEEEEEec
Q 043585 253 D-E---------DQRTDKEWKTLFLD--AGFTCCKITTM 279 (287)
Q Consensus 253 ~-~---------~~rt~~e~~~ll~~--aGf~~~~~~~~ 279 (287)
. . .....+++.++|.+ +||+.++++..
T Consensus 231 ~~~~~~~~~~~~~~~~p~~~~~~L~~~~~GF~~~~~~~~ 269 (292)
T 3g07_A 231 TLTETIYKNYYRIQLKPEQFSSYLTSPDVGFSSYELVAT 269 (292)
T ss_dssp TSCHHHHHHHHHCCCCGGGHHHHHTSTTTCCCEEEEC--
T ss_pred cccHHHHhhhhcEEEcHHHHHHHHHhcCCCceEEEEecc
Confidence 0 0 23357899999999 99998887765
No 76
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.00 E-value=6.8e-10 Score=97.34 Aligned_cols=116 Identities=11% Similarity=0.101 Sum_probs=87.4
Q ss_pred cccCcceEEEecCcc------------------cccchh-------hhhcCCC-------CCCceeeecc-Ccc---cCC
Q 043585 159 LIERLGSMVDVGGGN------------------VLDLPH-------AVANTPQ-------TENLKYVADD-MFQ---FIP 202 (287)
Q Consensus 159 ~~~~~~~vlDvGgG~------------------v~Dlp~-------vi~~a~~-------~~Ri~~~~gd-~~~---~~p 202 (287)
......+|||||||. .+|+.+ +++.+++ .++++++.+| +.. +++
T Consensus 40 ~~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 119 (275)
T 3bkx_A 40 QVKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTNLSDDLGPIA 119 (275)
T ss_dssp TCCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCCTTTCCGGGT
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECChhhhccCCCC
Confidence 456678999999998 345422 4444432 2689999998 543 233
Q ss_pred --CCCeEEeccccccCChHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCC-----------------------C---
Q 043585 203 --PADAYFFMLFFHAFGGEDSLKILKKCREAIAGNGQRGKVLIMDIVINEKED-----------------------E--- 254 (287)
Q Consensus 203 --~~D~~~l~~vlh~~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~-----------------------~--- 254 (287)
.||+|++..++|++++.+ .+++.++..++| ||++++.+...+.... .
T Consensus 120 ~~~fD~v~~~~~l~~~~~~~--~~~~~~~~l~~~---gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (275)
T 3bkx_A 120 DQHFDRVVLAHSLWYFASAN--ALALLFKNMAAV---CDHVDVAEWSMQPTALDQIGHLQAAMIQGLLYAIAPSDVANIR 194 (275)
T ss_dssp TCCCSEEEEESCGGGSSCHH--HHHHHHHHHTTT---CSEEEEEEECSSCSSGGGHHHHHHHHHHHHHHHHSCCTTCSCC
T ss_pred CCCEEEEEEccchhhCCCHH--HHHHHHHHHhCC---CCEEEEEEecCCCCchhhhhHHHHHHHHHHHhhcccccccccc
Confidence 499999999999998875 377777788887 9999999877643311 0
Q ss_pred CCCCHHHHHHHHHhCCCcEEEEEec
Q 043585 255 DQRTDKEWKTLFLDAGFTCCKITTM 279 (287)
Q Consensus 255 ~~rt~~e~~~ll~~aGf~~~~~~~~ 279 (287)
..+|.+++.++++++||+++++...
T Consensus 195 ~~~s~~~l~~~l~~aGf~~~~~~~~ 219 (275)
T 3bkx_A 195 TLITPDTLAQIAHDNTWTYTAGTIV 219 (275)
T ss_dssp CCCCHHHHHHHHHHHTCEEEECCCB
T ss_pred ccCCHHHHHHHHHHCCCeeEEEEEe
Confidence 3579999999999999999988776
No 77
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=98.98 E-value=2.2e-10 Score=100.56 Aligned_cols=85 Identities=15% Similarity=0.106 Sum_probs=66.1
Q ss_pred eeeccCccc-------CCCCCeEEeccccccC--ChHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCC---CCC----C
Q 043585 192 YVADDMFQF-------IPPADAYFFMLFFHAF--GGEDSLKILKKCREAIAGNGQRGKVLIMDIVINEK---EDE----D 255 (287)
Q Consensus 192 ~~~gd~~~~-------~p~~D~~~l~~vlh~~--~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~---~~~----~ 255 (287)
++.+|+.+. .+.||+|+++.+||.. +.++..++|+++++.|+| ||++++.+..-... +.. .
T Consensus 138 ~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKP---GG~li~~~~~~~~~~~~g~~~~~~~ 214 (263)
T 2a14_A 138 VLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKP---GGHLVTTVTLRLPSYMVGKREFSCV 214 (263)
T ss_dssp EEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEE---EEEEEEEEESSCCEEEETTEEEECC
T ss_pred EEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCC---CcEEEEEEeecCccceeCCeEeecc
Confidence 888998873 1259999999999974 346678899999999999 99999987543221 000 2
Q ss_pred CCCHHHHHHHHHhCCCcEEEEEec
Q 043585 256 QRTDKEWKTLFLDAGFTCCKITTM 279 (287)
Q Consensus 256 ~rt~~e~~~ll~~aGf~~~~~~~~ 279 (287)
..+.+++.++|+++||+++++...
T Consensus 215 ~~~~~~l~~~l~~aGF~i~~~~~~ 238 (263)
T 2a14_A 215 ALEKGEVEQAVLDAGFDIEQLLHS 238 (263)
T ss_dssp CCCHHHHHHHHHHTTEEEEEEEEE
T ss_pred ccCHHHHHHHHHHCCCEEEEEeec
Confidence 358999999999999999887754
No 78
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=98.95 E-value=1.1e-09 Score=94.82 Aligned_cols=111 Identities=14% Similarity=0.163 Sum_probs=84.3
Q ss_pred cccCcceEEEecCcc-----------------cccc-hhhhhcCCC-CCCceeeeccCcccCC--CCCeEEeccccccCC
Q 043585 159 LIERLGSMVDVGGGN-----------------VLDL-PHAVANTPQ-TENLKYVADDMFQFIP--PADAYFFMLFFHAFG 217 (287)
Q Consensus 159 ~~~~~~~vlDvGgG~-----------------v~Dl-p~vi~~a~~-~~Ri~~~~gd~~~~~p--~~D~~~l~~vlh~~~ 217 (287)
......+|||||||. .+|+ |.+++.+++ .++++++.+|+.+..+ .+|+|++..++|.++
T Consensus 30 ~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~l~~~~ 109 (259)
T 2p35_A 30 PLERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADRLPNTNFGKADLATWKPAQKADLLYANAVFQWVP 109 (259)
T ss_dssp CCSCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHHSTTSEEEECCTTTCCCSSCEEEEEEESCGGGST
T ss_pred CCCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhCCCcEEEECChhhcCccCCcCEEEEeCchhhCC
Confidence 345668999999998 4554 556666554 5789999999987224 499999999999997
Q ss_pred hHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCC------------------------CCCCCCCHHHHHHHHHhCCCcE
Q 043585 218 GEDSLKILKKCREAIAGNGQRGKVLIMDIVINEK------------------------EDEDQRTDKEWKTLFLDAGFTC 273 (287)
Q Consensus 218 d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~------------------------~~~~~rt~~e~~~ll~~aGf~~ 273 (287)
+. ..+|+++++.|+| ||++++.+...... .....++.++|.++|+++||++
T Consensus 110 ~~--~~~l~~~~~~L~p---gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~v 184 (259)
T 2p35_A 110 DH--LAVLSQLMDQLES---GGVLAVQMPDNLQEPTHIAMHETADGGPWKDAFSGGGLRRKPLPPPSDYFNALSPKSSRV 184 (259)
T ss_dssp TH--HHHHHHHGGGEEE---EEEEEEEEECCTTSHHHHHHHHHHHHSTTGGGC-------CCCCCHHHHHHHHGGGEEEE
T ss_pred CH--HHHHHHHHHhcCC---CeEEEEEeCCCCCcHHHHHHHHHhcCcchHHHhccccccccCCCCHHHHHHHHHhcCCce
Confidence 64 5899999999999 99999987522110 0114468999999999999975
Q ss_pred E
Q 043585 274 C 274 (287)
Q Consensus 274 ~ 274 (287)
.
T Consensus 185 ~ 185 (259)
T 2p35_A 185 D 185 (259)
T ss_dssp E
T ss_pred E
Confidence 3
No 79
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=98.94 E-value=2.5e-09 Score=89.40 Aligned_cols=108 Identities=8% Similarity=0.101 Sum_probs=84.1
Q ss_pred eEEEecCcc---------------cccc-hhhhhcCCC-----CCCceeeeccCcc-cCC--CCCeEEeccccccCChHH
Q 043585 165 SMVDVGGGN---------------VLDL-PHAVANTPQ-----TENLKYVADDMFQ-FIP--PADAYFFMLFFHAFGGED 220 (287)
Q Consensus 165 ~vlDvGgG~---------------v~Dl-p~vi~~a~~-----~~Ri~~~~gd~~~-~~p--~~D~~~l~~vlh~~~d~~ 220 (287)
+|||||||. .+|. |.+++.+++ ..+++++.+|+.+ +++ .+|+|++. ++.++.++
T Consensus 32 ~vLdiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~--~~~~~~~~ 109 (202)
T 2kw5_A 32 KILCLAEGEGRNACFLASLGYEVTAVDQSSVGLAKAKQLAQEKGVKITTVQSNLADFDIVADAWEGIVSI--FCHLPSSL 109 (202)
T ss_dssp EEEECCCSCTHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHTCCEEEECCBTTTBSCCTTTCSEEEEE--CCCCCHHH
T ss_pred CEEEECCCCCHhHHHHHhCCCeEEEEECCHHHHHHHHHHHHhcCCceEEEEcChhhcCCCcCCccEEEEE--hhcCCHHH
Confidence 999999998 5665 566666653 3489999999988 555 49999984 34557788
Q ss_pred HHHHHHHHHHHhcCCCCCcEEEEEeeccCCCC----CC----CCCCHHHHHHHHHhCCCcEEEEEec
Q 043585 221 SLKILKKCREAIAGNGQRGKVLIMDIVINEKE----DE----DQRTDKEWKTLFLDAGFTCCKITTM 279 (287)
Q Consensus 221 ~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~----~~----~~rt~~e~~~ll~~aGf~~~~~~~~ 279 (287)
...+|+++++.|+| ||++++.+....... .+ ..+|.+++.++|+ ||+++++...
T Consensus 110 ~~~~l~~~~~~L~p---gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~--Gf~v~~~~~~ 171 (202)
T 2kw5_A 110 RQQLYPKVYQGLKP---GGVFILEGFAPEQLQYNTGGPKDLDLLPKLETLQSELP--SLNWLIANNL 171 (202)
T ss_dssp HHHHHHHHHTTCCS---SEEEEEEEECTTTGGGTSCCSSSGGGCCCHHHHHHHCS--SSCEEEEEEE
T ss_pred HHHHHHHHHHhcCC---CcEEEEEEeccccccCCCCCCCcceeecCHHHHHHHhc--CceEEEEEEE
Confidence 89999999999999 999999887543321 11 5679999999999 9998876654
No 80
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.93 E-value=3.3e-09 Score=91.68 Aligned_cols=115 Identities=19% Similarity=0.244 Sum_probs=86.9
Q ss_pred cCcceEEEecCcc---------------cccc-hhhhhcCCC-----CCCceeeeccCcc-cCC-CCCeEEec-cccccC
Q 043585 161 ERLGSMVDVGGGN---------------VLDL-PHAVANTPQ-----TENLKYVADDMFQ-FIP-PADAYFFM-LFFHAF 216 (287)
Q Consensus 161 ~~~~~vlDvGgG~---------------v~Dl-p~vi~~a~~-----~~Ri~~~~gd~~~-~~p-~~D~~~l~-~vlh~~ 216 (287)
....+|||||||. .+|+ |.+++.+++ ..+++++.+|+.+ +.+ .+|+|++. ..+|.+
T Consensus 40 ~~~~~vLDlGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~~~~~~ 119 (252)
T 1wzn_A 40 REVRRVLDLACGTGIPTLELAERGYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIAFKNEFDAVTMFFSTIMYF 119 (252)
T ss_dssp SCCCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCCCCSCEEEEEECSSGGGGS
T ss_pred cCCCEEEEeCCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHhcCCceEEEECChhhcccCCCccEEEEcCCchhcC
Confidence 4567999999998 5676 667776653 3479999999988 444 49999986 567778
Q ss_pred ChHHHHHHHHHHHHHhcCCCCCcEEEEEeec--------------------------------------------cCCCC
Q 043585 217 GGEDSLKILKKCREAIAGNGQRGKVLIMDIV--------------------------------------------INEKE 252 (287)
Q Consensus 217 ~d~~~~~iL~~~~~al~~~~~~g~lli~e~~--------------------------------------------~~~~~ 252 (287)
++++..++|+++++.|+| ||.+++--.. ....+
T Consensus 120 ~~~~~~~~l~~~~~~L~p---gG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 196 (252)
T 1wzn_A 120 DEEDLRKLFSKVAEALKP---GGVFITDFPCWFYGGRDGPVVWNEQKGEEKLVIMDWREVEPAVQKLRFKRLVQILRPNG 196 (252)
T ss_dssp CHHHHHHHHHHHHHHEEE---EEEEEEEEEC-------CCEEEEEEETTEEEEEEEEEEEETTTTEEEEEEEEEEECTTS
T ss_pred CHHHHHHHHHHHHHHcCC---CeEEEEeccchhcccCCCCeeeeccCCCeeEEEEeecccccccceeeheeeeeecccCC
Confidence 888899999999999999 8888752111 01111
Q ss_pred CC---------CCCCHHHHHHHHHhCCCcEEEEEec
Q 043585 253 DE---------DQRTDKEWKTLFLDAGFTCCKITTM 279 (287)
Q Consensus 253 ~~---------~~rt~~e~~~ll~~aGf~~~~~~~~ 279 (287)
.. +.++.+|++ +|+++||+.++++.-
T Consensus 197 ~~~~~~~~~~~~~~~~~e~~-~l~~aGF~~~~~~~~ 231 (252)
T 1wzn_A 197 EVKAFLVDDELNIYTPREVR-LLAEKYFEKVKIYGN 231 (252)
T ss_dssp CEEEEEEEEEEECCCHHHHH-HHHTTTSSEEEEEET
T ss_pred ceeEEEEeeeeeeecHHHHH-HHHHhcCceeeeecc
Confidence 10 457999997 899999999988754
No 81
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=98.93 E-value=8.2e-10 Score=95.98 Aligned_cols=88 Identities=15% Similarity=0.129 Sum_probs=67.5
Q ss_pred c-eeeeccCcccC---C----CCCeEEeccccccCCh--HHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCC---CC---
Q 043585 190 L-KYVADDMFQFI---P----PADAYFFMLFFHAFGG--EDSLKILKKCREAIAGNGQRGKVLIMDIVINEK---ED--- 253 (287)
Q Consensus 190 i-~~~~gd~~~~~---p----~~D~~~l~~vlh~~~d--~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~---~~--- 253 (287)
+ +++.+|+.+.. + .+|+|++..+||..++ ++...+|+++++.|+| ||++++.+..-... +.
T Consensus 136 v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~Lkp---gG~li~~~~~~~~~~~~~~~~~ 212 (265)
T 2i62_A 136 IKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKP---GGFLVMVDALKSSYYMIGEQKF 212 (265)
T ss_dssp EEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEE---EEEEEEEEESSCCEEEETTEEE
T ss_pred heeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCC---CcEEEEEecCCCceEEcCCccc
Confidence 7 89999998731 2 3899999999995433 3567999999999999 99999987543211 00
Q ss_pred -CCCCCHHHHHHHHHhCCCcEEEEEecC
Q 043585 254 -EDQRTDKEWKTLFLDAGFTCCKITTMF 280 (287)
Q Consensus 254 -~~~rt~~e~~~ll~~aGf~~~~~~~~~ 280 (287)
....+.+++.++|+++||+++++....
T Consensus 213 ~~~~~~~~~~~~~l~~aGf~~~~~~~~~ 240 (265)
T 2i62_A 213 SSLPLGWETVRDAVEEAGYTIEQFEVIS 240 (265)
T ss_dssp ECCCCCHHHHHHHHHHTTCEEEEEEEEC
T ss_pred cccccCHHHHHHHHHHCCCEEEEEEEec
Confidence 134588899999999999998887654
No 82
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=98.90 E-value=1.7e-09 Score=95.61 Aligned_cols=114 Identities=18% Similarity=0.177 Sum_probs=89.9
Q ss_pred ccCcceEEEecCcc---------------cccc-hhhhhcCCC-----CCCceeeeccCcc-cCC-CCCeEEeccccccC
Q 043585 160 IERLGSMVDVGGGN---------------VLDL-PHAVANTPQ-----TENLKYVADDMFQ-FIP-PADAYFFMLFFHAF 216 (287)
Q Consensus 160 ~~~~~~vlDvGgG~---------------v~Dl-p~vi~~a~~-----~~Ri~~~~gd~~~-~~p-~~D~~~l~~vlh~~ 216 (287)
.....+|||||||. .+|. |..++.+++ ..+++++.+|+.+ +.+ .||+|++..++|++
T Consensus 118 ~~~~~~vLD~GcG~G~~~~~l~~~g~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~fD~i~~~~~~~~~ 197 (286)
T 3m70_A 118 IISPCKVLDLGCGQGRNSLYLSLLGYDVTSWDHNENSIAFLNETKEKENLNISTALYDINAANIQENYDFIVSTVVFMFL 197 (286)
T ss_dssp HSCSCEEEEESCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCGGGCCCCSCEEEEEECSSGGGS
T ss_pred ccCCCcEEEECCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHHcCCceEEEEeccccccccCCccEEEEccchhhC
Confidence 34678999999999 5665 666666653 2389999999988 334 49999999999999
Q ss_pred ChHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCCC-----CCCCHHHHHHHHHhCCCcEEEEEe
Q 043585 217 GGEDSLKILKKCREAIAGNGQRGKVLIMDIVINEKEDE-----DQRTDKEWKTLFLDAGFTCCKITT 278 (287)
Q Consensus 217 ~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~-----~~rt~~e~~~ll~~aGf~~~~~~~ 278 (287)
++++...+|+++++.|+| ||.++++.....+.... ...+.+++.++++. |+++....
T Consensus 198 ~~~~~~~~l~~~~~~Lkp---gG~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~ 259 (286)
T 3m70_A 198 NRERVPSIIKNMKEHTNV---GGYNLIVAAMSTDDVPCPLPFSFTFAENELKEYYKD--WEFLEYNE 259 (286)
T ss_dssp CGGGHHHHHHHHHHTEEE---EEEEEEEEEBCCSSSCCSSCCSCCBCTTHHHHHTTT--SEEEEEEC
T ss_pred CHHHHHHHHHHHHHhcCC---CcEEEEEEecCCCCCCCCCCccccCCHHHHHHHhcC--CEEEEEEc
Confidence 999999999999999999 99988877665443221 45678899999865 88876643
No 83
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=98.89 E-value=1.1e-09 Score=94.94 Aligned_cols=112 Identities=15% Similarity=0.137 Sum_probs=84.2
Q ss_pred ccCcceEEEecCcc---------------cccc-hhhhhcCCC-----CCCceeeeccCcc-cCC--CCCeEEecccccc
Q 043585 160 IERLGSMVDVGGGN---------------VLDL-PHAVANTPQ-----TENLKYVADDMFQ-FIP--PADAYFFMLFFHA 215 (287)
Q Consensus 160 ~~~~~~vlDvGgG~---------------v~Dl-p~vi~~a~~-----~~Ri~~~~gd~~~-~~p--~~D~~~l~~vlh~ 215 (287)
.....+|||||||. .+|. |.+++.+++ ..+++++.+|+.+ +++ .+|+|++..++|.
T Consensus 37 ~~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 116 (263)
T 2yqz_A 37 KGEEPVFLELGVGTGRIALPLIARGYRYIALDADAAMLEVFRQKIAGVDRKVQVVQADARAIPLPDESVHGVIVVHLWHL 116 (263)
T ss_dssp SSSCCEEEEETCTTSTTHHHHHTTTCEEEEEESCHHHHHHHHHHTTTSCTTEEEEESCTTSCCSCTTCEEEEEEESCGGG
T ss_pred CCCCCEEEEeCCcCCHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEcccccCCCCCCCeeEEEECCchhh
Confidence 45678999999998 4555 555555532 4789999999977 555 3999999999999
Q ss_pred CChHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCC---------------------C-CCCCHHHHHHHHHhCCCcE
Q 043585 216 FGGEDSLKILKKCREAIAGNGQRGKVLIMDIVINEKED---------------------E-DQRTDKEWKTLFLDAGFTC 273 (287)
Q Consensus 216 ~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~---------------------~-~~rt~~e~~~ll~~aGf~~ 273 (287)
+++. ..+|+++++.|+| ||++++. ...++... . ..++.+++.++|+++||++
T Consensus 117 ~~~~--~~~l~~~~~~L~p---gG~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~ 190 (263)
T 2yqz_A 117 VPDW--PKVLAEAIRVLKP---GGALLEG-WDQAEASPEWTLQERWRAFAAEEGFPVERGLHAKRLKEVEEALRRLGLKP 190 (263)
T ss_dssp CTTH--HHHHHHHHHHEEE---EEEEEEE-EEEECCCHHHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHHHHHHHTTCCC
T ss_pred cCCH--HHHHHHHHHHCCC---CcEEEEE-ecCCCccHHHHHHHHHHHHHHHhCCCcccccccCCHHHHHHHHHHcCCCc
Confidence 9864 5899999999999 9999887 21111011 0 2357889999999999997
Q ss_pred EEEE
Q 043585 274 CKIT 277 (287)
Q Consensus 274 ~~~~ 277 (287)
+.+.
T Consensus 191 ~~~~ 194 (263)
T 2yqz_A 191 RTRE 194 (263)
T ss_dssp EEEE
T ss_pred ceEE
Confidence 6543
No 84
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=98.88 E-value=1.3e-09 Score=96.62 Aligned_cols=87 Identities=15% Similarity=0.238 Sum_probs=64.6
Q ss_pred eeeeccCccc-------CCC--CCeEEeccccccCChH--HHHHHHHHHHHHhcCCCCCcEEEEEeeccCCC---CC---
Q 043585 191 KYVADDMFQF-------IPP--ADAYFFMLFFHAFGGE--DSLKILKKCREAIAGNGQRGKVLIMDIVINEK---ED--- 253 (287)
Q Consensus 191 ~~~~gd~~~~-------~p~--~D~~~l~~vlh~~~d~--~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~---~~--- 253 (287)
+++.+|+.+. +|. ||+|++..+||..+++ +-.++|+++++.|+| ||+|++.+...... +.
T Consensus 153 ~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~Lkp---GG~l~~~~~~~~~~~~~~~~~~ 229 (289)
T 2g72_A 153 RVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRP---GGHLLLIGALEESWYLAGEARL 229 (289)
T ss_dssp EEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEE---EEEEEEEEEESCCEEEETTEEE
T ss_pred eEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCC---CCEEEEEEecCcceEEcCCeee
Confidence 3455588762 222 9999999999985533 668999999999999 99999986442211 00
Q ss_pred -CCCCCHHHHHHHHHhCCCcEEEEEecC
Q 043585 254 -EDQRTDKEWKTLFLDAGFTCCKITTMF 280 (287)
Q Consensus 254 -~~~rt~~e~~~ll~~aGf~~~~~~~~~ 280 (287)
...++.++|.++|+++||+++++....
T Consensus 230 ~~~~~~~~~l~~~l~~aGf~~~~~~~~~ 257 (289)
T 2g72_A 230 TVVPVSEEEVREALVRSGYKVRDLRTYI 257 (289)
T ss_dssp ECCCCCHHHHHHHHHHTTEEEEEEEEEE
T ss_pred eeccCCHHHHHHHHHHcCCeEEEeeEee
Confidence 145689999999999999988776543
No 85
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=98.87 E-value=4.5e-09 Score=92.24 Aligned_cols=83 Identities=13% Similarity=0.184 Sum_probs=70.7
Q ss_pred cCcceEEEecCcc---------------cccc-hhhhhcCCCCCCceeeeccCcc-cCC--CCCeEEeccccccCChHHH
Q 043585 161 ERLGSMVDVGGGN---------------VLDL-PHAVANTPQTENLKYVADDMFQ-FIP--PADAYFFMLFFHAFGGEDS 221 (287)
Q Consensus 161 ~~~~~vlDvGgG~---------------v~Dl-p~vi~~a~~~~Ri~~~~gd~~~-~~p--~~D~~~l~~vlh~~~d~~~ 221 (287)
....+|||||||+ .+|. +.+++.|++.++|+++.+|+.+ ++| .+|+|++..++|.++.+
T Consensus 38 ~~~~~vLDvGcGtG~~~~~l~~~~~~v~gvD~s~~ml~~a~~~~~v~~~~~~~e~~~~~~~sfD~v~~~~~~h~~~~~-- 115 (257)
T 4hg2_A 38 PARGDALDCGCGSGQASLGLAEFFERVHAVDPGEAQIRQALRHPRVTYAVAPAEDTGLPPASVDVAIAAQAMHWFDLD-- 115 (257)
T ss_dssp SCSSEEEEESCTTTTTHHHHHTTCSEEEEEESCHHHHHTCCCCTTEEEEECCTTCCCCCSSCEEEEEECSCCTTCCHH--
T ss_pred CCCCCEEEEcCCCCHHHHHHHHhCCEEEEEeCcHHhhhhhhhcCCceeehhhhhhhcccCCcccEEEEeeehhHhhHH--
Confidence 3457899999999 5776 7789999988999999999987 666 39999999999988654
Q ss_pred HHHHHHHHHHhcCCCCCcEEEEEeeccC
Q 043585 222 LKILKKCREAIAGNGQRGKVLIMDIVIN 249 (287)
Q Consensus 222 ~~iL~~~~~al~~~~~~g~lli~e~~~~ 249 (287)
+.++++++.|+| ||+|+++....+
T Consensus 116 -~~~~e~~rvLkp---gG~l~~~~~~~~ 139 (257)
T 4hg2_A 116 -RFWAELRRVARP---GAVFAAVTYGLT 139 (257)
T ss_dssp -HHHHHHHHHEEE---EEEEEEEEECCC
T ss_pred -HHHHHHHHHcCC---CCEEEEEECCCC
Confidence 689999999999 999999876544
No 86
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=98.85 E-value=1.4e-09 Score=91.28 Aligned_cols=111 Identities=11% Similarity=0.125 Sum_probs=88.3
Q ss_pred ccCcceEEEecCcc----------------cccc-hhhhhcCCC------CCCceeeeccCcccCC-CCCeEEecccccc
Q 043585 160 IERLGSMVDVGGGN----------------VLDL-PHAVANTPQ------TENLKYVADDMFQFIP-PADAYFFMLFFHA 215 (287)
Q Consensus 160 ~~~~~~vlDvGgG~----------------v~Dl-p~vi~~a~~------~~Ri~~~~gd~~~~~p-~~D~~~l~~vlh~ 215 (287)
.....+|||||||. .+|. |.+++.+++ ..+++++.+|+.+..+ .+|+|++...+|.
T Consensus 58 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~fD~i~~~~~~~~ 137 (205)
T 3grz_A 58 MVKPLTVADVGTGSGILAIAAHKLGAKSVLATDISDESMTAAEENAALNGIYDIALQKTSLLADVDGKFDLIVANILAEI 137 (205)
T ss_dssp CSSCCEEEEETCTTSHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTTTCCSCEEEEEEESCHHH
T ss_pred ccCCCEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEeccccccCCCCceEEEECCcHHH
Confidence 34568999999998 5665 666666653 2349999999988544 5999999887765
Q ss_pred CChHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCCCCCCCHHHHHHHHHhCCCcEEEEEecCCcccee
Q 043585 216 FGGEDSLKILKKCREAIAGNGQRGKVLIMDIVINEKEDEDQRTDKEWKTLFLDAGFTCCKITTMFGLKSLI 286 (287)
Q Consensus 216 ~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~~~rt~~e~~~ll~~aGf~~~~~~~~~~~~s~i 286 (287)
...+|+++++.|+| ||++++.+.... +.+++.++++++||+.+++....++.+++
T Consensus 138 -----~~~~l~~~~~~L~~---gG~l~~~~~~~~--------~~~~~~~~~~~~Gf~~~~~~~~~~w~~~~ 192 (205)
T 3grz_A 138 -----LLDLIPQLDSHLNE---DGQVIFSGIDYL--------QLPKIEQALAENSFQIDLKMRAGRWIGLA 192 (205)
T ss_dssp -----HHHHGGGSGGGEEE---EEEEEEEEEEGG--------GHHHHHHHHHHTTEEEEEEEEETTEEEEE
T ss_pred -----HHHHHHHHHHhcCC---CCEEEEEecCcc--------cHHHHHHHHHHcCCceEEeeccCCEEEEE
Confidence 36789999999999 999998765544 47899999999999999998887777765
No 87
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=98.83 E-value=6.5e-09 Score=93.30 Aligned_cols=115 Identities=17% Similarity=0.235 Sum_probs=83.2
Q ss_pred CcceEEEecCcc----------------cccc-hhhhhcCCC-----CC-------CceeeeccCc---------ccCC-
Q 043585 162 RLGSMVDVGGGN----------------VLDL-PHAVANTPQ-----TE-------NLKYVADDMF---------QFIP- 202 (287)
Q Consensus 162 ~~~~vlDvGgG~----------------v~Dl-p~vi~~a~~-----~~-------Ri~~~~gd~~---------~~~p- 202 (287)
...+|||||||. .+|+ +.+++.|++ .. +++|..+|+. +++|
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~~ 127 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYGEIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFYF 127 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCCS
T ss_pred CCCeEEEEecCCcHhHHHHHhcCCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhccccC
Confidence 467999999998 5665 566776653 11 2567777762 1233
Q ss_pred -CCCeEEecccccc-CChHHHHHHHHHHHHHhcCCCCCcEEEEEeec---------------cC-----C----------
Q 043585 203 -PADAYFFMLFFHA-FGGEDSLKILKKCREAIAGNGQRGKVLIMDIV---------------IN-----E---------- 250 (287)
Q Consensus 203 -~~D~~~l~~vlh~-~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~---------------~~-----~---------- 250 (287)
.+|+|++..++|+ |++++...+|+++++.|+| ||.+++...- .. +
T Consensus 128 ~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~Lkp---GG~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 204 (302)
T 2vdw_A 128 GKFNIIDWQFAIHYSFHPRHYATVMNNLSELTAS---GGKVLITTMDGDKLSKLTDKKTFIIHKNLPSSENYMSVEKIAD 204 (302)
T ss_dssp SCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEE---EEEEEEEEECHHHHTTCCSCEEEECCSSSCTTTSEEEECEEET
T ss_pred CCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCC---CCEEEEEeCCHHHHHHHHhcCCcccccccccccceeeeccccc
Confidence 4999999999997 5666678999999999999 9999876541 00 0
Q ss_pred --------CC-CC----CCCCHHHHHHHHHhCCCcEEEEEec
Q 043585 251 --------KE-DE----DQRTDKEWKTLFLDAGFTCCKITTM 279 (287)
Q Consensus 251 --------~~-~~----~~rt~~e~~~ll~~aGf~~~~~~~~ 279 (287)
.. .. ...+.+++.++++++||+++.....
T Consensus 205 ~~~~~~~~~~~~~~~~e~~v~~~el~~l~~~~Gl~lv~~~~f 246 (302)
T 2vdw_A 205 DRIVVYNPSTMSTPMTEYIIKKNDIVRVFNEYGFVLVDNVDF 246 (302)
T ss_dssp TEEEEBCTTTBSSCEEEECCCHHHHHHHHHHTTEEEEEEEEH
T ss_pred cccceeeccccCCCceeeeeEHHHHHHHHHHCCCEEEEecCh
Confidence 00 00 2457899999999999999988764
No 88
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=98.83 E-value=3.3e-09 Score=93.71 Aligned_cols=109 Identities=20% Similarity=0.275 Sum_probs=85.7
Q ss_pred cCcceEEEecCcc--------------------cccc-hhhhhcCCC------CCCceeeeccCcccC-----C----CC
Q 043585 161 ERLGSMVDVGGGN--------------------VLDL-PHAVANTPQ------TENLKYVADDMFQFI-----P----PA 204 (287)
Q Consensus 161 ~~~~~vlDvGgG~--------------------v~Dl-p~vi~~a~~------~~Ri~~~~gd~~~~~-----p----~~ 204 (287)
.+..++||||||. .+|. |.+++.++. ..+++|+.+|+.++. | .+
T Consensus 77 ~g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~~~~~~~v~aD~~~~~~~l~~~~~~~~~ 156 (277)
T 3giw_A 77 AGIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTPEGRTAYVEADMLDPASILDAPELRDTL 156 (277)
T ss_dssp SCCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCSSSEEEEEECCTTCHHHHHTCHHHHTTC
T ss_pred cCCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCCCCcEEEEEecccChhhhhccccccccc
Confidence 3668999999994 4676 888988874 247999999998731 1 24
Q ss_pred C-----eEEeccccccCChHH-HHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCC--------------C-CCCCHHHHH
Q 043585 205 D-----AYFFMLFFHAFGGED-SLKILKKCREAIAGNGQRGKVLIMDIVINEKED--------------E-DQRTDKEWK 263 (287)
Q Consensus 205 D-----~~~l~~vlh~~~d~~-~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~--------------~-~~rt~~e~~ 263 (287)
| ++++..+||..+|++ ...+|++++++|+| ||.|++.+...+.... + ..||.+|+.
T Consensus 157 D~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~P---GG~Lvls~~~~d~~p~~~~~~~~~~~~~g~p~~~rs~~ei~ 233 (277)
T 3giw_A 157 DLTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPS---GSYLAMSIGTAEFAPQEVGRVAREYAARNMPMRLRTHAEAE 233 (277)
T ss_dssp CTTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCT---TCEEEEEEECCTTSHHHHHHHHHHHHHTTCCCCCCCHHHHH
T ss_pred CcCCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCC---CcEEEEEeccCCCCHHHHHHHHHHHHhcCCCCccCCHHHHH
Confidence 5 688999999999976 57899999999999 9999998876543211 1 668999999
Q ss_pred HHHHhCCCcEE
Q 043585 264 TLFLDAGFTCC 274 (287)
Q Consensus 264 ~ll~~aGf~~~ 274 (287)
++|+ ||.++
T Consensus 234 ~~f~--Glelv 242 (277)
T 3giw_A 234 EFFE--GLELV 242 (277)
T ss_dssp HTTT--TSEEC
T ss_pred HHhC--CCccc
Confidence 9995 99854
No 89
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=98.82 E-value=3.5e-08 Score=80.70 Aligned_cols=104 Identities=16% Similarity=0.204 Sum_probs=82.8
Q ss_pred cCcceEEEecCcc--------------cccc-hhhhhcCCCCCCceeeeccCcccCC--CCCeEEeccccccCChH----
Q 043585 161 ERLGSMVDVGGGN--------------VLDL-PHAVANTPQTENLKYVADDMFQFIP--PADAYFFMLFFHAFGGE---- 219 (287)
Q Consensus 161 ~~~~~vlDvGgG~--------------v~Dl-p~vi~~a~~~~Ri~~~~gd~~~~~p--~~D~~~l~~vlh~~~d~---- 219 (287)
....+|||||||+ .+|. |.+++. ..+++++.+|+.++.+ .+|+|++.-.+|..++.
T Consensus 22 ~~~~~vLD~GcG~G~~~~~l~~~~~v~gvD~s~~~~~~---~~~~~~~~~d~~~~~~~~~fD~i~~n~~~~~~~~~~~~~ 98 (170)
T 3q87_B 22 LEMKIVLDLGTSTGVITEQLRKRNTVVSTDLNIRALES---HRGGNLVRADLLCSINQESVDVVVFNPPYVPDTDDPIIG 98 (170)
T ss_dssp CCSCEEEEETCTTCHHHHHHTTTSEEEEEESCHHHHHT---CSSSCEEECSTTTTBCGGGCSEEEECCCCBTTCCCTTTB
T ss_pred CCCCeEEEeccCccHHHHHHHhcCcEEEEECCHHHHhc---ccCCeEEECChhhhcccCCCCEEEECCCCccCCcccccc
Confidence 3456999999999 3454 555555 6789999999998665 49999999888865554
Q ss_pred ---HHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCCCCCCCHHHHHHHHHhCCCcEEEEEec
Q 043585 220 ---DSLKILKKCREAIAGNGQRGKVLIMDIVINEKEDEDQRTDKEWKTLFLDAGFTCCKITTM 279 (287)
Q Consensus 220 ---~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~~~rt~~e~~~ll~~aGf~~~~~~~~ 279 (287)
+...+++++.+.+ | ||++++.+.... +.+++.++++++||+...+...
T Consensus 99 ~~~~~~~~~~~~~~~l-p---gG~l~~~~~~~~--------~~~~l~~~l~~~gf~~~~~~~~ 149 (170)
T 3q87_B 99 GGYLGREVIDRFVDAV-T---VGMLYLLVIEAN--------RPKEVLARLEERGYGTRILKVR 149 (170)
T ss_dssp CCGGGCHHHHHHHHHC-C---SSEEEEEEEGGG--------CHHHHHHHHHHTTCEEEEEEEE
T ss_pred CCcchHHHHHHHHhhC-C---CCEEEEEEecCC--------CHHHHHHHHHHCCCcEEEEEee
Confidence 5567889999999 8 999999875443 4789999999999998877765
No 90
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=98.80 E-value=6.6e-09 Score=91.91 Aligned_cols=84 Identities=13% Similarity=0.093 Sum_probs=68.0
Q ss_pred ccCcceEEEecCcc---------------cccc-hhhhhcCCC----------CCCceeeeccCcc-c---CC--CCCeE
Q 043585 160 IERLGSMVDVGGGN---------------VLDL-PHAVANTPQ----------TENLKYVADDMFQ-F---IP--PADAY 207 (287)
Q Consensus 160 ~~~~~~vlDvGgG~---------------v~Dl-p~vi~~a~~----------~~Ri~~~~gd~~~-~---~p--~~D~~ 207 (287)
..+..+|||||||. .+|+ |.+++.+++ ..++.+..+|+.+ + ++ .+|+|
T Consensus 55 ~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~fD~V 134 (293)
T 3thr_A 55 QHGCHRVLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVPAGDGFDAV 134 (293)
T ss_dssp HTTCCEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHSCCTTCEEEE
T ss_pred ccCCCEEEEecCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCccccccCCCeEEE
Confidence 34568999999999 5676 566666542 3678899999887 4 44 49999
Q ss_pred Eec-cccccCCh-----HHHHHHHHHHHHHhcCCCCCcEEEEEee
Q 043585 208 FFM-LFFHAFGG-----EDSLKILKKCREAIAGNGQRGKVLIMDI 246 (287)
Q Consensus 208 ~l~-~vlh~~~d-----~~~~~iL~~~~~al~~~~~~g~lli~e~ 246 (287)
++. +++|++++ ++..++|+++++.|+| ||++++...
T Consensus 135 ~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~Lkp---gG~l~~~~~ 176 (293)
T 3thr_A 135 ICLGNSFAHLPDSKGDQSEHRLALKNIASMVRP---GGLLVIDHR 176 (293)
T ss_dssp EECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEE---EEEEEEEEE
T ss_pred EEcChHHhhcCccccCHHHHHHHHHHHHHHcCC---CeEEEEEeC
Confidence 998 89999988 8889999999999999 999987653
No 91
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=98.78 E-value=1.1e-08 Score=90.87 Aligned_cols=69 Identities=12% Similarity=0.048 Sum_probs=55.1
Q ss_pred CCCeEEeccccccCChHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCC---------------CCCCCCCHHHHHHHHH
Q 043585 203 PADAYFFMLFFHAFGGEDSLKILKKCREAIAGNGQRGKVLIMDIVINEK---------------EDEDQRTDKEWKTLFL 267 (287)
Q Consensus 203 ~~D~~~l~~vlh~~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~---------------~~~~~rt~~e~~~ll~ 267 (287)
.||+|+++++||+++|. .+.|+++++.|+| ||++++.+...+.. .....++.++|.++|+
T Consensus 135 ~fD~V~~~~~l~~~~d~--~~~l~~~~r~Lkp---gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 209 (292)
T 2aot_A 135 KWDFIHMIQMLYYVKDI--PATLKFFHSLLGT---NAKMLIIVVSGSSGWDKLWKKYGSRFPQDDLCQYITSDDLTQMLD 209 (292)
T ss_dssp CEEEEEEESCGGGCSCH--HHHHHHHHHTEEE---EEEEEEEEECTTSHHHHHHHHHGGGSCCCTTCCCCCHHHHHHHHH
T ss_pred ceeEEEEeeeeeecCCH--HHHHHHHHHHcCC---CcEEEEEEecCCccHHHHHHHHHHhccCCCcccCCCHHHHHHHHH
Confidence 49999999999999986 4789999999999 99999985432110 0013468999999999
Q ss_pred hCCCcEEEE
Q 043585 268 DAGFTCCKI 276 (287)
Q Consensus 268 ~aGf~~~~~ 276 (287)
++||+++..
T Consensus 210 ~aGf~~~~~ 218 (292)
T 2aot_A 210 NLGLKYECY 218 (292)
T ss_dssp HHTCCEEEE
T ss_pred HCCCceEEE
Confidence 999998764
No 92
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=98.76 E-value=3.5e-09 Score=98.74 Aligned_cols=120 Identities=11% Similarity=0.084 Sum_probs=84.6
Q ss_pred hhhcccccccCcceEEEecCcc---------------cccc-hhhhhcCCCCCCceee-----eccCcc-cCC--CCCeE
Q 043585 152 VKDCCRTLIERLGSMVDVGGGN---------------VLDL-PHAVANTPQTENLKYV-----ADDMFQ-FIP--PADAY 207 (287)
Q Consensus 152 ~~~~~~~~~~~~~~vlDvGgG~---------------v~Dl-p~vi~~a~~~~Ri~~~-----~gd~~~-~~p--~~D~~ 207 (287)
++.+ ......+|||||||. .+|. +.+++.+++. .+... .++... +++ .||+|
T Consensus 100 ~~~~---~~~~~~~VLDiGcG~G~~~~~l~~~g~~v~gvD~s~~~~~~a~~~-~~~~~~~~~~~~~~~~l~~~~~~fD~I 175 (416)
T 4e2x_A 100 LATE---LTGPDPFIVEIGCNDGIMLRTIQEAGVRHLGFEPSSGVAAKAREK-GIRVRTDFFEKATADDVRRTEGPANVI 175 (416)
T ss_dssp HHTT---TCSSSCEEEEETCTTTTTHHHHHHTTCEEEEECCCHHHHHHHHTT-TCCEECSCCSHHHHHHHHHHHCCEEEE
T ss_pred HHHh---CCCCCCEEEEecCCCCHHHHHHHHcCCcEEEECCCHHHHHHHHHc-CCCcceeeechhhHhhcccCCCCEEEE
Confidence 4545 455678999999998 5665 5566666542 22222 222222 222 59999
Q ss_pred EeccccccCChHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCC---------C--CCCCCCCHHHHHHHHHhCCCcEEEE
Q 043585 208 FFMLFFHAFGGEDSLKILKKCREAIAGNGQRGKVLIMDIVINE---------K--EDEDQRTDKEWKTLFLDAGFTCCKI 276 (287)
Q Consensus 208 ~l~~vlh~~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~---------~--~~~~~rt~~e~~~ll~~aGf~~~~~ 276 (287)
++.++||+++|. ..+|+++++.|+| ||++++....... . .....+|.+++.++++++||+++++
T Consensus 176 ~~~~vl~h~~d~--~~~l~~~~r~Lkp---gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll~~aGf~~~~~ 250 (416)
T 4e2x_A 176 YAANTLCHIPYV--QSVLEGVDALLAP---DGVFVFEDPYLGDIVAKTSFDQIFDEHFFLFSATSVQGMAQRCGFELVDV 250 (416)
T ss_dssp EEESCGGGCTTH--HHHHHHHHHHEEE---EEEEEEEEECHHHHHHHTCGGGCSTTCCEECCHHHHHHHHHHTTEEEEEE
T ss_pred EECChHHhcCCH--HHHHHHHHHHcCC---CeEEEEEeCChHHhhhhcchhhhhhhhhhcCCHHHHHHHHHHcCCEEEEE
Confidence 999999999864 6899999999999 9999987543110 0 0115579999999999999999988
Q ss_pred EecC
Q 043585 277 TTMF 280 (287)
Q Consensus 277 ~~~~ 280 (287)
...+
T Consensus 251 ~~~~ 254 (416)
T 4e2x_A 251 QRLP 254 (416)
T ss_dssp EEEC
T ss_pred EEcc
Confidence 8754
No 93
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=98.72 E-value=4.5e-08 Score=81.97 Aligned_cols=98 Identities=16% Similarity=0.203 Sum_probs=78.3
Q ss_pred cccCcceEEEecCcc-----------------cccc-hhhhhcCCC------CCCceeeeccCcccC---CCCCeEEecc
Q 043585 159 LIERLGSMVDVGGGN-----------------VLDL-PHAVANTPQ------TENLKYVADDMFQFI---PPADAYFFML 211 (287)
Q Consensus 159 ~~~~~~~vlDvGgG~-----------------v~Dl-p~vi~~a~~------~~Ri~~~~gd~~~~~---p~~D~~~l~~ 211 (287)
......+|||||||. .+|. |..++.+++ .++++++.+|+.+.. +.+|++++..
T Consensus 37 ~~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~i~~~~ 116 (204)
T 3e05_A 37 RLQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLDDLPDPDRVFIGG 116 (204)
T ss_dssp TCCTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTCTTSCCCSEEEESC
T ss_pred CCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhhhcCCCCCEEEECC
Confidence 456678999999998 5666 666766653 378999999997743 3599999998
Q ss_pred ccccCChHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCCCCCCCHHHHHHHHHhCCCc
Q 043585 212 FFHAFGGEDSLKILKKCREAIAGNGQRGKVLIMDIVINEKEDEDQRTDKEWKTLFLDAGFT 272 (287)
Q Consensus 212 vlh~~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~~~rt~~e~~~ll~~aGf~ 272 (287)
.++ +..++|+++++.|+| ||++++...... +.+++.++++++||.
T Consensus 117 ~~~-----~~~~~l~~~~~~Lkp---gG~l~~~~~~~~--------~~~~~~~~l~~~g~~ 161 (204)
T 3e05_A 117 SGG-----MLEEIIDAVDRRLKS---EGVIVLNAVTLD--------TLTKAVEFLEDHGYM 161 (204)
T ss_dssp CTT-----CHHHHHHHHHHHCCT---TCEEEEEECBHH--------HHHHHHHHHHHTTCE
T ss_pred CCc-----CHHHHHHHHHHhcCC---CeEEEEEecccc--------cHHHHHHHHHHCCCc
Confidence 886 456899999999999 999998765433 478999999999993
No 94
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=98.69 E-value=1.2e-08 Score=85.98 Aligned_cols=111 Identities=14% Similarity=0.181 Sum_probs=78.8
Q ss_pred ccCcceEEEecCcc---------------cccc-hhhhhcCCC----CCCceeeeccCcccCC--CCCeEEeccccccCC
Q 043585 160 IERLGSMVDVGGGN---------------VLDL-PHAVANTPQ----TENLKYVADDMFQFIP--PADAYFFMLFFHAFG 217 (287)
Q Consensus 160 ~~~~~~vlDvGgG~---------------v~Dl-p~vi~~a~~----~~Ri~~~~gd~~~~~p--~~D~~~l~~vlh~~~ 217 (287)
.....+|||||||. .+|. |.+++.+++ .++++++.+|+.+..+ .||+|++..++|+++
T Consensus 49 ~~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~l~~~~ 128 (216)
T 3ofk_A 49 SGAVSNGLEIGCAAGAFTEKLAPHCKRLTVIDVMPRAIGRACQRTKRWSHISWAATDILQFSTAELFDLIVVAEVLYYLE 128 (216)
T ss_dssp TSSEEEEEEECCTTSHHHHHHGGGEEEEEEEESCHHHHHHHHHHTTTCSSEEEEECCTTTCCCSCCEEEEEEESCGGGSS
T ss_pred cCCCCcEEEEcCCCCHHHHHHHHcCCEEEEEECCHHHHHHHHHhcccCCCeEEEEcchhhCCCCCCccEEEEccHHHhCC
Confidence 34567999999999 5676 666666543 4689999999988333 499999999999998
Q ss_pred h-HHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCC-CCCCCHHHHHHHHHhCCCcEE
Q 043585 218 G-EDSLKILKKCREAIAGNGQRGKVLIMDIVINEKED-EDQRTDKEWKTLFLDAGFTCC 274 (287)
Q Consensus 218 d-~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~-~~~rt~~e~~~ll~~aGf~~~ 274 (287)
+ ++..++|+++++.|+| ||.+++.......... ......+.+..++.+. +...
T Consensus 129 ~~~~~~~~l~~~~~~L~p---gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 183 (216)
T 3ofk_A 129 DMTQMRTAIDNMVKMLAP---GGHLVFGSARDATCRRWGHVAGAETVITILTEA-LTEV 183 (216)
T ss_dssp SHHHHHHHHHHHHHTEEE---EEEEEEEEECHHHHHHTTCSCCHHHHHHHHHHH-SEEE
T ss_pred CHHHHHHHHHHHHHHcCC---CCEEEEEecCCCcchhhhhhhhHHHHHHHHHhh-ccce
Confidence 6 5667999999999999 9999886643221100 0223455555666543 4443
No 95
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=98.69 E-value=2.3e-08 Score=83.96 Aligned_cols=102 Identities=13% Similarity=0.108 Sum_probs=78.6
Q ss_pred CcceEEEecCcc-------------cccc-hhhhhcCCC-CCCceeeeccCcc-cCC--CCCeEEeccccccCChHHHHH
Q 043585 162 RLGSMVDVGGGN-------------VLDL-PHAVANTPQ-TENLKYVADDMFQ-FIP--PADAYFFMLFFHAFGGEDSLK 223 (287)
Q Consensus 162 ~~~~vlDvGgG~-------------v~Dl-p~vi~~a~~-~~Ri~~~~gd~~~-~~p--~~D~~~l~~vlh~~~d~~~~~ 223 (287)
...+|||||||. .+|. |.+++.+++ ..+++++.+|+.+ +++ .+|+|++..++|++++. .+
T Consensus 36 ~~~~vLdiG~G~G~~~~~l~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~--~~ 113 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRLPYPQKVGVEPSEAMLAVGRRRAPEATWVRAWGEALPFPGESFDVVLLFTTLEFVEDV--ER 113 (211)
T ss_dssp CCSEEEEETCTTCHHHHHCCCSEEEEECCCHHHHHHHHHHCTTSEEECCCTTSCCSCSSCEEEEEEESCTTTCSCH--HH
T ss_pred CCCeEEEECCCCCHhHHhCCCCeEEEEeCCHHHHHHHHHhCCCcEEEEcccccCCCCCCcEEEEEEcChhhhcCCH--HH
Confidence 668999999998 3343 445555443 4689999999987 555 49999999999999864 58
Q ss_pred HHHHHHHHhcCCCCCcEEEEEeeccCCC-----------CC-----CCCCCHHHHHHHHHhCC
Q 043585 224 ILKKCREAIAGNGQRGKVLIMDIVINEK-----------ED-----EDQRTDKEWKTLFLDAG 270 (287)
Q Consensus 224 iL~~~~~al~~~~~~g~lli~e~~~~~~-----------~~-----~~~rt~~e~~~ll~~aG 270 (287)
+|+++++.|+| ||++++.+...... +. .+.+|.++++++|+ |
T Consensus 114 ~l~~~~~~L~p---gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~l~--G 171 (211)
T 2gs9_A 114 VLLEARRVLRP---GGALVVGVLEALSPWAALYRRLGEKGVLPWAQARFLAREDLKALLG--P 171 (211)
T ss_dssp HHHHHHHHEEE---EEEEEEEEECTTSHHHHHHHHHHHTTCTTGGGCCCCCHHHHHHHHC--S
T ss_pred HHHHHHHHcCC---CCEEEEEecCCcCcHHHHHHHHhhccCccccccccCCHHHHHHHhc--C
Confidence 99999999999 99999987643221 10 15579999999999 7
No 96
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=98.67 E-value=2.2e-08 Score=89.08 Aligned_cols=105 Identities=16% Similarity=0.193 Sum_probs=78.6
Q ss_pred cCcceEEEecCcc------------------cccc-hhhhhcCCC--------CCCceeeeccCcc-cCC--------CC
Q 043585 161 ERLGSMVDVGGGN------------------VLDL-PHAVANTPQ--------TENLKYVADDMFQ-FIP--------PA 204 (287)
Q Consensus 161 ~~~~~vlDvGgG~------------------v~Dl-p~vi~~a~~--------~~Ri~~~~gd~~~-~~p--------~~ 204 (287)
....+|||||||. .+|+ |.+++.+++ ..+++++.+|+.+ +.+ .+
T Consensus 35 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~f 114 (299)
T 3g5t_A 35 GERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLGADSVDKQKI 114 (299)
T ss_dssp SCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGCTTTTTSSCE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCccccccccCCCe
Confidence 5678999999999 4555 556666543 5789999999988 432 49
Q ss_pred CeEEeccccccCChHHHHHHHHHHHHHhcCCCCCcEEEEEeec---cCCCCC--C----------------CCCCHHHHH
Q 043585 205 DAYFFMLFFHAFGGEDSLKILKKCREAIAGNGQRGKVLIMDIV---INEKED--E----------------DQRTDKEWK 263 (287)
Q Consensus 205 D~~~l~~vlh~~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~---~~~~~~--~----------------~~rt~~e~~ 263 (287)
|+|++..++|.+ +..++|+++++.|+| ||.|++++.. ..+... . ..+..+.+.
T Consensus 115 D~V~~~~~l~~~---~~~~~l~~~~~~Lkp---gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~p~~~~~~ 188 (299)
T 3g5t_A 115 DMITAVECAHWF---DFEKFQRSAYANLRK---DGTIAIWGYADPIFPDYPEFDDLMIEVPYGKQGLGPYWEQPGRSRLR 188 (299)
T ss_dssp EEEEEESCGGGS---CHHHHHHHHHHHEEE---EEEEEEEEEEEEECTTCGGGTTHHHHHHHCTTTTGGGSCTTHHHHHH
T ss_pred eEEeHhhHHHHh---CHHHHHHHHHHhcCC---CcEEEEEecCCccccCcHHHHHHHHHhccCcccccchhhchhhHHHH
Confidence 999999999999 356899999999999 9999984433 322111 0 114556678
Q ss_pred HHHHhCCC
Q 043585 264 TLFLDAGF 271 (287)
Q Consensus 264 ~ll~~aGf 271 (287)
++++++||
T Consensus 189 ~~l~~~gf 196 (299)
T 3g5t_A 189 NMLKDSHL 196 (299)
T ss_dssp TTTTTCCC
T ss_pred HhhhccCC
Confidence 99999999
No 97
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=98.59 E-value=5.1e-08 Score=85.07 Aligned_cols=109 Identities=17% Similarity=0.261 Sum_probs=83.2
Q ss_pred cCcceEEEecCcc---------------cccc-hhhhhcCCC-----CCCceeeeccCcccCC--CCCeEEeccccccCC
Q 043585 161 ERLGSMVDVGGGN---------------VLDL-PHAVANTPQ-----TENLKYVADDMFQFIP--PADAYFFMLFFHAFG 217 (287)
Q Consensus 161 ~~~~~vlDvGgG~---------------v~Dl-p~vi~~a~~-----~~Ri~~~~gd~~~~~p--~~D~~~l~~vlh~~~ 217 (287)
.+..+|||+|||+ .+|. |..++.+++ .-.+++..+|+.+.+| .||+|++....|
T Consensus 119 ~~~~~VLDiGcG~G~l~~~la~~g~~v~gvDi~~~~v~~a~~n~~~~~~~v~~~~~d~~~~~~~~~fD~Vv~n~~~~--- 195 (254)
T 2nxc_A 119 RPGDKVLDLGTGSGVLAIAAEKLGGKALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEAALPFGPFDLLVANLYAE--- 195 (254)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTTCEEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHHHGGGCCEEEEEEECCHH---
T ss_pred CCCCEEEEecCCCcHHHHHHHHhCCeEEEEECCHHHHHHHHHHHHHcCCcEEEEECChhhcCcCCCCCEEEECCcHH---
Confidence 4568999999999 4565 556665543 1128999999887543 599999754443
Q ss_pred hHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCCCCCCCHHHHHHHHHhCCCcEEEEEecCCccce
Q 043585 218 GEDSLKILKKCREAIAGNGQRGKVLIMDIVINEKEDEDQRTDKEWKTLFLDAGFTCCKITTMFGLKSL 285 (287)
Q Consensus 218 d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~~~rt~~e~~~ll~~aGf~~~~~~~~~~~~s~ 285 (287)
....+++++++.|+| ||++++.+.... +.+++.++++++||+++++....++..+
T Consensus 196 --~~~~~l~~~~~~Lkp---gG~lils~~~~~--------~~~~v~~~l~~~Gf~~~~~~~~~~W~~l 250 (254)
T 2nxc_A 196 --LHAALAPRYREALVP---GGRALLTGILKD--------RAPLVREAMAGAGFRPLEEAAEGEWVLL 250 (254)
T ss_dssp --HHHHHHHHHHHHEEE---EEEEEEEEEEGG--------GHHHHHHHHHHTTCEEEEEEEETTEEEE
T ss_pred --HHHHHHHHHHHHcCC---CCEEEEEeeccC--------CHHHHHHHHHHCCCEEEEEeccCCeEEE
Confidence 356899999999999 999998765543 3789999999999999998887776554
No 98
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=98.55 E-value=2.6e-07 Score=82.69 Aligned_cols=116 Identities=16% Similarity=0.106 Sum_probs=85.3
Q ss_pred cCcceEEEecCcc----------------cccc-hhhhhcCCC-------------CCCceeeeccCcc-c----C--C-
Q 043585 161 ERLGSMVDVGGGN----------------VLDL-PHAVANTPQ-------------TENLKYVADDMFQ-F----I--P- 202 (287)
Q Consensus 161 ~~~~~vlDvGgG~----------------v~Dl-p~vi~~a~~-------------~~Ri~~~~gd~~~-~----~--p- 202 (287)
....+|||||||. .+|+ +.+++.+++ ..+++++.+|+.+ + + +
T Consensus 33 ~~~~~VLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 112 (313)
T 3bgv_A 33 KRDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQ 112 (313)
T ss_dssp --CCEEEEETCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSSTT
T ss_pred CCCCEEEEECCCCcHHHHHHHhcCCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccCC
Confidence 3667999999998 4554 455555442 1378999999987 3 3 2
Q ss_pred -CCCeEEeccccccC--ChHHHHHHHHHHHHHhcCCCCCcEEEEEeecc----------------C--------CC-C-C
Q 043585 203 -PADAYFFMLFFHAF--GGEDSLKILKKCREAIAGNGQRGKVLIMDIVI----------------N--------EK-E-D 253 (287)
Q Consensus 203 -~~D~~~l~~vlh~~--~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~----------------~--------~~-~-~ 253 (287)
.+|+|++..++|.. +.++...+|+++++.|+| ||.+++...-. . +. . .
T Consensus 113 ~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~Lkp---gG~li~~~~~~~~l~~~~~~~~~~~~~~~~~~~~f~~~~~~~ 189 (313)
T 3bgv_A 113 MCFDICSCQFVCHYSFESYEQADMMLRNACERLSP---GGYFIGTTPNSFELIRRLEASETESFGNEIYTVKFQKKGDYP 189 (313)
T ss_dssp CCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEE---EEEEEEEEECHHHHHHHHTTSSSSEEECSSEEEEESCSSCCC
T ss_pred CCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCC---CcEEEEecCChHHHHHHHHhhccCccCCeeEEEEeCCCCCCC
Confidence 49999999999986 556778999999999999 99998876521 0 00 0 0
Q ss_pred C-----------------CCCCHHHHHHHHHhCCCcEEEEEec
Q 043585 254 E-----------------DQRTDKEWKTLFLDAGFTCCKITTM 279 (287)
Q Consensus 254 ~-----------------~~rt~~e~~~ll~~aGf~~~~~~~~ 279 (287)
. ...+.+++.++++++||+++.....
T Consensus 190 ~~~~~~~f~l~~~~~~~~~~~~~~~~~~l~~~~G~~~v~~~~f 232 (313)
T 3bgv_A 190 LFGCKYDFNLEGVVDVPEFLVYFPLLNEMAKKYNMKLVYKKTF 232 (313)
T ss_dssp SSCCEEEEEEC---CCEEECCCHHHHHHHGGGGTEEEEEEEEH
T ss_pred CccceEEEEECCcccCcceEEcHHHHHHHHHHcCcEEEEecCH
Confidence 0 2257899999999999999988765
No 99
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=98.54 E-value=9.4e-08 Score=81.81 Aligned_cols=113 Identities=13% Similarity=0.213 Sum_probs=76.6
Q ss_pred cccCcceEEEecCcc-----------------cccc-hhhhhc----CCCCCCceeeeccCccc-----CC-CCCeEEec
Q 043585 159 LIERLGSMVDVGGGN-----------------VLDL-PHAVAN----TPQTENLKYVADDMFQF-----IP-PADAYFFM 210 (287)
Q Consensus 159 ~~~~~~~vlDvGgG~-----------------v~Dl-p~vi~~----a~~~~Ri~~~~gd~~~~-----~p-~~D~~~l~ 210 (287)
...+..+|||+|||+ .+|. |..++. ++..++++++.+|+.++ ++ .+|+|+
T Consensus 71 ~~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~D~v~-- 148 (230)
T 1fbn_A 71 PIKRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQEYANIVEKVDVIY-- 148 (230)
T ss_dssp CCCTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGGGTTTSCCEEEEE--
T ss_pred CCCCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcCCCeEEEECCCCCcccccccCccEEEEE--
Confidence 345678999999999 3444 444433 33357899999999762 22 489988
Q ss_pred cccccCChH-HHHHHHHHHHHHhcCCCCCcEEEEEeeccC--CCCCC-CCCCHHHHHHHHHhCCCcEEEEEecCC
Q 043585 211 LFFHAFGGE-DSLKILKKCREAIAGNGQRGKVLIMDIVIN--EKEDE-DQRTDKEWKTLFLDAGFTCCKITTMFG 281 (287)
Q Consensus 211 ~vlh~~~d~-~~~~iL~~~~~al~~~~~~g~lli~e~~~~--~~~~~-~~rt~~e~~~ll~~aGf~~~~~~~~~~ 281 (287)
|+.++. +...+|+++++.|+| ||++++. .... +...+ .....+++. +|+++||+..++.+...
T Consensus 149 ---~~~~~~~~~~~~l~~~~~~Lkp---gG~l~i~-~~~~~~~~~~~~~~~~~~~l~-~l~~~Gf~~~~~~~~~~ 215 (230)
T 1fbn_A 149 ---EDVAQPNQAEILIKNAKWFLKK---GGYGMIA-IKARSIDVTKDPKEIFKEQKE-ILEAGGFKIVDEVDIEP 215 (230)
T ss_dssp ---ECCCSTTHHHHHHHHHHHHEEE---EEEEEEE-EEGGGTCSSSCHHHHHHHHHH-HHHHHTEEEEEEEECTT
T ss_pred ---EecCChhHHHHHHHHHHHhCCC---CcEEEEE-EecCCCCCCCCHHHhhHHHHH-HHHHCCCEEEEEEccCC
Confidence 565443 445679999999999 9999986 2111 11111 211336777 99999999998887744
No 100
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=98.54 E-value=1.4e-07 Score=77.32 Aligned_cols=108 Identities=16% Similarity=0.308 Sum_probs=80.5
Q ss_pred cccCcceEEEecCcc---------------cccc-hhhhhcCCC------CC--CceeeeccCcccCC--CCCeEEeccc
Q 043585 159 LIERLGSMVDVGGGN---------------VLDL-PHAVANTPQ------TE--NLKYVADDMFQFIP--PADAYFFMLF 212 (287)
Q Consensus 159 ~~~~~~~vlDvGgG~---------------v~Dl-p~vi~~a~~------~~--Ri~~~~gd~~~~~p--~~D~~~l~~v 212 (287)
......+|||+|||. .+|. |..++.+++ .+ |++++.+|+.+..+ .+|+|++...
T Consensus 49 ~~~~~~~vLdiG~G~G~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~ 128 (194)
T 1dus_A 49 VVDKDDDILDLGCGYGVIGIALADEVKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENVKDRKYNKIITNPP 128 (194)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTCTTSCEEEEEECCC
T ss_pred ccCCCCeEEEeCCCCCHHHHHHHHcCCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhcccccCCceEEEECCC
Confidence 344677999999998 4565 556665543 22 59999999988554 4999999888
Q ss_pred cccCChHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCCCCCCCHHHHHHHHHhCCCcEEEEEec
Q 043585 213 FHAFGGEDSLKILKKCREAIAGNGQRGKVLIMDIVINEKEDEDQRTDKEWKTLFLDAGFTCCKITTM 279 (287)
Q Consensus 213 lh~~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~~~rt~~e~~~ll~~aGf~~~~~~~~ 279 (287)
+|. ..++...+|+++++.|+| ||++++...... ...++.+++++. |..++++..
T Consensus 129 ~~~-~~~~~~~~l~~~~~~L~~---gG~l~~~~~~~~--------~~~~~~~~l~~~-~~~~~~~~~ 182 (194)
T 1dus_A 129 IRA-GKEVLHRIIEEGKELLKD---NGEIWVVIQTKQ--------GAKSLAKYMKDV-FGNVETVTI 182 (194)
T ss_dssp STT-CHHHHHHHHHHHHHHEEE---EEEEEEEEESTH--------HHHHHHHHHHHH-HSCCEEEEE
T ss_pred ccc-chhHHHHHHHHHHHHcCC---CCEEEEEECCCC--------ChHHHHHHHHHH-hcceEEEec
Confidence 874 456678999999999999 999998875432 245688888888 655555554
No 101
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=98.53 E-value=1.1e-07 Score=77.42 Aligned_cols=101 Identities=12% Similarity=0.171 Sum_probs=76.5
Q ss_pred cccCcceEEEecCcc-----------------cccc-hhhhhcCCC-------CCCceeeeccCcccC----CCCCeEEe
Q 043585 159 LIERLGSMVDVGGGN-----------------VLDL-PHAVANTPQ-------TENLKYVADDMFQFI----PPADAYFF 209 (287)
Q Consensus 159 ~~~~~~~vlDvGgG~-----------------v~Dl-p~vi~~a~~-------~~Ri~~~~gd~~~~~----p~~D~~~l 209 (287)
......+|||||||. .+|. |..++.+++ .+++ ++.+|..+.+ +.+|+|++
T Consensus 22 ~~~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~~~~~~~~~~D~i~~ 100 (178)
T 3hm2_A 22 APKPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPRAFDDVPDNPDVIFI 100 (178)
T ss_dssp CCCTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTGGGGGCCSCCSEEEE
T ss_pred cccCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHhhhhccCCCCCEEEE
Confidence 345667999999999 5665 556666552 3478 8889887643 34999999
Q ss_pred ccccccCChHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCCCCCCCHHHHHHHHHhCCCcEEEEE
Q 043585 210 MLFFHAFGGEDSLKILKKCREAIAGNGQRGKVLIMDIVINEKEDEDQRTDKEWKTLFLDAGFTCCKIT 277 (287)
Q Consensus 210 ~~vlh~~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~~~rt~~e~~~ll~~aGf~~~~~~ 277 (287)
...+|. ..+++++++.|+| ||++++.+...+ +..++.+++++.|+.+.++.
T Consensus 101 ~~~~~~------~~~l~~~~~~L~~---gG~l~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~ 151 (178)
T 3hm2_A 101 GGGLTA------PGVFAAAWKRLPV---GGRLVANAVTVE--------SEQMLWALRKQFGGTISSFA 151 (178)
T ss_dssp CC-TTC------TTHHHHHHHTCCT---TCEEEEEECSHH--------HHHHHHHHHHHHCCEEEEEE
T ss_pred CCcccH------HHHHHHHHHhcCC---CCEEEEEeeccc--------cHHHHHHHHHHcCCeeEEEE
Confidence 999987 4689999999999 999998775443 36788899999998776543
No 102
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=98.52 E-value=8.6e-08 Score=82.76 Aligned_cols=116 Identities=11% Similarity=0.102 Sum_probs=78.8
Q ss_pred cccCcceEEEecCcc------------------cccc-hhhhhcC----CCCCCceeeeccCccc--CC----CCCeEEe
Q 043585 159 LIERLGSMVDVGGGN------------------VLDL-PHAVANT----PQTENLKYVADDMFQF--IP----PADAYFF 209 (287)
Q Consensus 159 ~~~~~~~vlDvGgG~------------------v~Dl-p~vi~~a----~~~~Ri~~~~gd~~~~--~p----~~D~~~l 209 (287)
.+..+.+|||+|||+ .+|. |++++.+ ++..++..+.+|...+ .| .+|++++
T Consensus 74 ~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~~p~~~~~~~~~vDvVf~ 153 (233)
T 4df3_A 74 PVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDARFPEKYRHLVEGVDGLYA 153 (233)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCTTEEEEESCTTCGGGGTTTCCCEEEEEE
T ss_pred CCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhcCeeEEEEeccCccccccccceEEEEEE
Confidence 577889999999999 4565 5555443 3467899999888763 22 3787764
Q ss_pred ccccccCChHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCC-CCCCCCHHHHHHHHHhCCCcEEEEEecCC
Q 043585 210 MLFFHAFGGEDSLKILKKCREAIAGNGQRGKVLIMDIVINEKE-DEDQRTDKEWKTLFLDAGFTCCKITTMFG 281 (287)
Q Consensus 210 ~~vlh~~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~-~~~~rt~~e~~~ll~~aGf~~~~~~~~~~ 281 (287)
- ++.. ++...+++++++.|+| ||+++|......++. .+.....++-.+.|+++||+..++..+..
T Consensus 154 d--~~~~--~~~~~~l~~~~r~LKp---GG~lvI~ik~r~~d~~~p~~~~~~~ev~~L~~~GF~l~e~i~L~p 219 (233)
T 4df3_A 154 D--VAQP--EQAAIVVRNARFFLRD---GGYMLMAIKARSIDVTTEPSEVYKREIKTLMDGGLEIKDVVHLDP 219 (233)
T ss_dssp C--CCCT--THHHHHHHHHHHHEEE---EEEEEEEEECCHHHHHTCCCHHHHHHHHHHHHTTCCEEEEEECTT
T ss_pred e--ccCC--hhHHHHHHHHHHhccC---CCEEEEEEecccCCCCCChHHHHHHHHHHHHHCCCEEEEEEccCC
Confidence 2 2222 2345789999999999 999998654332211 11122345566778999999999988754
No 103
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=98.51 E-value=9.4e-09 Score=88.34 Aligned_cols=110 Identities=13% Similarity=0.127 Sum_probs=77.9
Q ss_pred cCcceEEEecCcc----------------cccc-hhhhhcCCC-----CCCceeeeccCcc---cCC--CCCeEEe-ccc
Q 043585 161 ERLGSMVDVGGGN----------------VLDL-PHAVANTPQ-----TENLKYVADDMFQ---FIP--PADAYFF-MLF 212 (287)
Q Consensus 161 ~~~~~vlDvGgG~----------------v~Dl-p~vi~~a~~-----~~Ri~~~~gd~~~---~~p--~~D~~~l-~~v 212 (287)
....+|||||||. .+|. |.+++.+++ ..+++++.+|+.+ +++ .||+|++ .+.
T Consensus 59 ~~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~d~~~ 138 (236)
T 1zx0_A 59 SKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTYP 138 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCCC
T ss_pred CCCCeEEEEeccCCHHHHHHHhcCCCeEEEEcCCHHHHHHHHHHHHhcCCCeEEEecCHHHhhcccCCCceEEEEECCcc
Confidence 4567999999999 4665 566666653 4679999999876 344 4999998 554
Q ss_pred --cccCChHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCC-----CCCC-CCCCHHHHHHHHHhCCCcE
Q 043585 213 --FHAFGGEDSLKILKKCREAIAGNGQRGKVLIMDIVINE-----KEDE-DQRTDKEWKTLFLDAGFTC 273 (287)
Q Consensus 213 --lh~~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~-----~~~~-~~rt~~e~~~ll~~aGf~~ 273 (287)
.|++..++...+|+++++.|+| ||++++++..... .... .....+++...+.++||+.
T Consensus 139 ~~~~~~~~~~~~~~l~~~~r~Lkp---gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~ 204 (236)
T 1zx0_A 139 LSEETWHTHQFNFIKNHAFRLLKP---GGVLTYCNLTSWGELMKSKYSDITIMFEETQVPALLEAGFRR 204 (236)
T ss_dssp CBGGGTTTHHHHHHHHTHHHHEEE---EEEEEECCHHHHHHHTTTTCSCHHHHHHHHTHHHHHHTTCCG
T ss_pred cchhhhhhhhHHHHHHHHHHhcCC---CeEEEEEecCcHHHhhchhhhhhhhhccHHHHHHHHHCCCCC
Confidence 5566666667889999999999 9999988754211 0100 1122356677899999984
No 104
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=98.51 E-value=2.6e-07 Score=77.81 Aligned_cols=102 Identities=15% Similarity=0.193 Sum_probs=77.9
Q ss_pred cccCcceEEEecCcc---------------cccc-hhhhhcCCC-------CCCceeeeccCccc---CCCCCeEEeccc
Q 043585 159 LIERLGSMVDVGGGN---------------VLDL-PHAVANTPQ-------TENLKYVADDMFQF---IPPADAYFFMLF 212 (287)
Q Consensus 159 ~~~~~~~vlDvGgG~---------------v~Dl-p~vi~~a~~-------~~Ri~~~~gd~~~~---~p~~D~~~l~~v 212 (287)
......+|||||||. .+|. |..++.+++ .++++++.+|+.+. .+.+|+|++...
T Consensus 52 ~~~~~~~vLDlGcG~G~~~~~la~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~D~v~~~~~ 131 (204)
T 3njr_A 52 APRRGELLWDIGGGSGSVSVEWCLAGGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALADLPLPEAVFIGGG 131 (204)
T ss_dssp CCCTTCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGTTSCCCSEEEECSC
T ss_pred CCCCCCEEEEecCCCCHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcccCCCCCEEEECCc
Confidence 456678999999999 5676 667766653 33899999999883 236999998774
Q ss_pred cccCChHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCCCCCCCHHHHHHHHHhCCCcEEEEEe
Q 043585 213 FHAFGGEDSLKILKKCREAIAGNGQRGKVLIMDIVINEKEDEDQRTDKEWKTLFLDAGFTCCKITT 278 (287)
Q Consensus 213 lh~~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~~~rt~~e~~~ll~~aGf~~~~~~~ 278 (287)
+ + .. +++++++.|+| ||++++...... +..++.+++++.|+++.++..
T Consensus 132 ~----~--~~-~l~~~~~~Lkp---gG~lv~~~~~~~--------~~~~~~~~l~~~g~~i~~i~~ 179 (204)
T 3njr_A 132 G----S--QA-LYDRLWEWLAP---GTRIVANAVTLE--------SETLLTQLHARHGGQLLRIDI 179 (204)
T ss_dssp C----C--HH-HHHHHHHHSCT---TCEEEEEECSHH--------HHHHHHHHHHHHCSEEEEEEE
T ss_pred c----c--HH-HHHHHHHhcCC---CcEEEEEecCcc--------cHHHHHHHHHhCCCcEEEEEe
Confidence 4 2 23 89999999999 999988654332 477889999999998776543
No 105
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=98.49 E-value=8.3e-08 Score=78.92 Aligned_cols=118 Identities=19% Similarity=0.215 Sum_probs=75.9
Q ss_pred ccCcceEEEecCcc---------------cccc-hhhhhcCCC------CCCceeeeccCcc-c-C-C-CCCeEEec-cc
Q 043585 160 IERLGSMVDVGGGN---------------VLDL-PHAVANTPQ------TENLKYVADDMFQ-F-I-P-PADAYFFM-LF 212 (287)
Q Consensus 160 ~~~~~~vlDvGgG~---------------v~Dl-p~vi~~a~~------~~Ri~~~~gd~~~-~-~-p-~~D~~~l~-~v 212 (287)
.....+|||+|||. .+|. |.+++.+++ .++++++.+|+.. + . + .+|+|++. ..
T Consensus 20 ~~~~~~vLDiGcG~G~~~~~la~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~~~~~~~fD~v~~~~~~ 99 (185)
T 3mti_A 20 LDDESIVVDATMGNGNDTAFLAGLSKKVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLDHYVREPIRAAIFNLGY 99 (185)
T ss_dssp CCTTCEEEESCCTTSHHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGGTCCSCEEEEEEEEC-
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHHhhccCCcCEEEEeCCC
Confidence 45678999999999 5776 667777654 3789999977655 1 3 3 49999876 33
Q ss_pred ccc------CChHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCCCCCCCHHHHHHHHHhCCCcEEEEEecC
Q 043585 213 FHA------FGGEDSLKILKKCREAIAGNGQRGKVLIMDIVINEKEDEDQRTDKEWKTLFLDAGFTCCKITTMF 280 (287)
Q Consensus 213 lh~------~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~~~rt~~e~~~ll~~aGf~~~~~~~~~ 280 (287)
++. ...++...+|+++++.|+| ||+++++...-.+.+........+|.+.+...+|.+.......
T Consensus 100 ~~~~~~~~~~~~~~~~~~l~~~~~~Lkp---gG~l~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 170 (185)
T 3mti_A 100 LPSADKSVITKPHTTLEAIEKILDRLEV---GGRLAIMIYYGHDGGDMEKDAVLEYVIGLDQRVFTAMLYQPLN 170 (185)
T ss_dssp ----------CHHHHHHHHHHHHHHEEE---EEEEEEEEC------CHHHHHHHHHHHHSCTTTEEEEEEEESS
T ss_pred CCCcchhcccChhhHHHHHHHHHHhcCC---CcEEEEEEeCCCCCCHHHHHHHHHHHHhCCCceEEEEEehhhc
Confidence 332 0335667889999999999 9999998654333221122234455555556688888777653
No 106
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=98.49 E-value=4.7e-08 Score=86.13 Aligned_cols=103 Identities=12% Similarity=0.113 Sum_probs=78.0
Q ss_pred cccCcceEEEecCcc------------------cccc-hhhhhcCCC----C---CCceeeeccCcccCC--CCCeEEec
Q 043585 159 LIERLGSMVDVGGGN------------------VLDL-PHAVANTPQ----T---ENLKYVADDMFQFIP--PADAYFFM 210 (287)
Q Consensus 159 ~~~~~~~vlDvGgG~------------------v~Dl-p~vi~~a~~----~---~Ri~~~~gd~~~~~p--~~D~~~l~ 210 (287)
+.....+|||+|||. .+|. |..++.+++ . ++++++.+|+.++++ .+|+|++
T Consensus 107 ~~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~~~~fD~Vi~- 185 (275)
T 1yb2_A 107 GLRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADFISDQMYDAVIA- 185 (275)
T ss_dssp CCCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTCCCSCCEEEEEE-
T ss_pred CCCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhccCcCCCccEEEE-
Confidence 456778999999998 4555 555555542 2 589999999988655 3999997
Q ss_pred cccccCChHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCCCCCCCHHHHHHHHHhCCCcEEEEEec
Q 043585 211 LFFHAFGGEDSLKILKKCREAIAGNGQRGKVLIMDIVINEKEDEDQRTDKEWKTLFLDAGFTCCKITTM 279 (287)
Q Consensus 211 ~vlh~~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~~~rt~~e~~~ll~~aGf~~~~~~~~ 279 (287)
++++. .++|+++++.|+| ||++++...... ..+++.++++++||+..++...
T Consensus 186 ----~~~~~--~~~l~~~~~~Lkp---gG~l~i~~~~~~--------~~~~~~~~l~~~Gf~~~~~~~~ 237 (275)
T 1yb2_A 186 ----DIPDP--WNHVQKIASMMKP---GSVATFYLPNFD--------QSEKTVLSLSASGMHHLETVEL 237 (275)
T ss_dssp ----CCSCG--GGSHHHHHHTEEE---EEEEEEEESSHH--------HHHHHHHHSGGGTEEEEEEEEE
T ss_pred ----cCcCH--HHHHHHHHHHcCC---CCEEEEEeCCHH--------HHHHHHHHHHHCCCeEEEEEEE
Confidence 34433 3789999999999 999999874332 3567888899999998887763
No 107
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=98.46 E-value=1e-08 Score=88.55 Aligned_cols=109 Identities=12% Similarity=0.072 Sum_probs=74.7
Q ss_pred cCcceEEEecCcc----------------cccc-hhhhhcCCC-----CCCceeeeccCcc---cCC--CCCeEEe----
Q 043585 161 ERLGSMVDVGGGN----------------VLDL-PHAVANTPQ-----TENLKYVADDMFQ---FIP--PADAYFF---- 209 (287)
Q Consensus 161 ~~~~~vlDvGgG~----------------v~Dl-p~vi~~a~~-----~~Ri~~~~gd~~~---~~p--~~D~~~l---- 209 (287)
..+.+|||||||. ++|+ |.+++.|++ ..++.++.+|... +++ .||.|++
T Consensus 59 ~~G~rVLdiG~G~G~~~~~~~~~~~~~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~FD~i~~D~~~ 138 (236)
T 3orh_A 59 SKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTYP 138 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHTTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCCC
T ss_pred cCCCeEEEECCCccHHHHHHHHhCCcEEEEEeCCHHHHHHHHHHHhhCCCceEEEeehHHhhcccccccCCceEEEeeee
Confidence 5568999999999 5665 778888764 5568888887654 344 3788764
Q ss_pred -ccccccCChHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCC-CCC-----CCCCHHHHHHHHHhCCCcEE
Q 043585 210 -MLFFHAFGGEDSLKILKKCREAIAGNGQRGKVLIMDIVINEK-EDE-----DQRTDKEWKTLFLDAGFTCC 274 (287)
Q Consensus 210 -~~vlh~~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~-~~~-----~~rt~~e~~~ll~~aGf~~~ 274 (287)
...++++.+ ...+++++++.|+| ||+++.++...... ... .....+.+...|.++||+++
T Consensus 139 ~~~~~~~~~~--~~~~~~e~~rvLkP---GG~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~eaGF~~~ 205 (236)
T 3orh_A 139 LSEETWHTHQ--FNFIKNHAFRLLKP---GGVLTYCNLTSWGELMKSKYSDITIMFEETQVPALLEAGFRRE 205 (236)
T ss_dssp CBGGGTTTHH--HHHHHHTHHHHEEE---EEEEEECCHHHHHHHTTTTCSCHHHHHHHHTHHHHHHHTCCGG
T ss_pred cccchhhhcc--hhhhhhhhhheeCC---CCEEEEEecCCchhhhhhhhhhhhhhhHHHHHHHHHHcCCeEE
Confidence 444444444 46899999999999 99988776432111 110 11234567788899999864
No 108
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=98.45 E-value=4.1e-08 Score=83.77 Aligned_cols=99 Identities=10% Similarity=0.071 Sum_probs=75.3
Q ss_pred cCcceEEEecCcc---------------cccc-hhhhhcCCC-CCCceeeeccCcc--cCC---CCCeEEeccccccCCh
Q 043585 161 ERLGSMVDVGGGN---------------VLDL-PHAVANTPQ-TENLKYVADDMFQ--FIP---PADAYFFMLFFHAFGG 218 (287)
Q Consensus 161 ~~~~~vlDvGgG~---------------v~Dl-p~vi~~a~~-~~Ri~~~~gd~~~--~~p---~~D~~~l~~vlh~~~d 218 (287)
....+|||||||. .+|. |.+++.+++ .++++++.+|+.+ +++ .+|+|++.
T Consensus 47 ~~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~~fD~v~~~-------- 118 (226)
T 3m33_A 47 TPQTRVLEAGCGHGPDAARFGPQAARWAAYDFSPELLKLARANAPHADVYEWNGKGELPAGLGAPFGLIVSR-------- 118 (226)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHHCTTSEEEECCSCSSCCTTCCCCEEEEEEE--------
T ss_pred CCCCeEEEeCCCCCHHHHHHHHcCCEEEEEECCHHHHHHHHHhCCCceEEEcchhhccCCcCCCCEEEEEeC--------
Confidence 4568999999999 5666 666766654 6789999999976 333 49999887
Q ss_pred HHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCCCCCCCHHHHHHHHHhCCCcEEEEEec
Q 043585 219 EDSLKILKKCREAIAGNGQRGKVLIMDIVINEKEDEDQRTDKEWKTLFLDAGFTCCKITTM 279 (287)
Q Consensus 219 ~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~~~rt~~e~~~ll~~aGf~~~~~~~~ 279 (287)
.+...+|+++++.|+| ||+++... ...+.+++.++++++||+...+...
T Consensus 119 ~~~~~~l~~~~~~Lkp---gG~l~~~~---------~~~~~~~~~~~l~~~Gf~~~~~~~~ 167 (226)
T 3m33_A 119 RGPTSVILRLPELAAP---DAHFLYVG---------PRLNVPEVPERLAAVGWDIVAEDHV 167 (226)
T ss_dssp SCCSGGGGGHHHHEEE---EEEEEEEE---------SSSCCTHHHHHHHHTTCEEEEEEEE
T ss_pred CCHHHHHHHHHHHcCC---CcEEEEeC---------CcCCHHHHHHHHHHCCCeEEEEEee
Confidence 1235789999999999 89888111 2345678999999999998776543
No 109
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=98.45 E-value=1.8e-07 Score=83.86 Aligned_cols=112 Identities=13% Similarity=0.113 Sum_probs=77.8
Q ss_pred cCcceEEEecCcc-----------------cccc-hhhhhcCCC----------CCCceeeeccCcc-c-C-C--CCCeE
Q 043585 161 ERLGSMVDVGGGN-----------------VLDL-PHAVANTPQ----------TENLKYVADDMFQ-F-I-P--PADAY 207 (287)
Q Consensus 161 ~~~~~vlDvGgG~-----------------v~Dl-p~vi~~a~~----------~~Ri~~~~gd~~~-~-~-p--~~D~~ 207 (287)
.+..+|||||||. .+|+ |.+++.+++ .+|++++.+|+.+ . . + .||+|
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDvI 173 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDVV 173 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeEE
Confidence 4568999999998 4565 666666542 4789999999987 2 1 3 49999
Q ss_pred EeccccccCChHHH--HHHHHHHHHHhcCCCCCcEEEEEeeccCCCCCCCCCCHHHHHHHHHhCCCcEEEEEec
Q 043585 208 FFMLFFHAFGGEDS--LKILKKCREAIAGNGQRGKVLIMDIVINEKEDEDQRTDKEWKTLFLDAGFTCCKITTM 279 (287)
Q Consensus 208 ~l~~vlh~~~d~~~--~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~~~rt~~e~~~ll~~aGf~~~~~~~~ 279 (287)
++....+.++++.. ..++++++++|+| ||.+++.... ......+.+++.+.++++||..+++...
T Consensus 174 i~d~~~~~~~~~~l~~~~~l~~~~~~Lkp---gG~lv~~~~~----~~~~~~~~~~~~~~l~~~GF~~v~~~~~ 240 (304)
T 3bwc_A 174 IIDTTDPAGPASKLFGEAFYKDVLRILKP---DGICCNQGES----IWLDLELIEKMSRFIRETGFASVQYALM 240 (304)
T ss_dssp EEECC---------CCHHHHHHHHHHEEE---EEEEEEEECC----TTTCHHHHHHHHHHHHHHTCSEEEEEEC
T ss_pred EECCCCccccchhhhHHHHHHHHHHhcCC---CcEEEEecCC----cccchHHHHHHHHHHHhCCCCcEEEEEe
Confidence 99777666554433 5789999999999 8988886321 1112345788999999999998877754
No 110
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=98.45 E-value=3.2e-07 Score=80.72 Aligned_cols=110 Identities=18% Similarity=0.239 Sum_probs=80.6
Q ss_pred cCcceEEEecCcc-----------------cccc-hhhhhcCCC------CCCceeeeccCcccCC--CCCeEEecc---
Q 043585 161 ERLGSMVDVGGGN-----------------VLDL-PHAVANTPQ------TENLKYVADDMFQFIP--PADAYFFML--- 211 (287)
Q Consensus 161 ~~~~~vlDvGgG~-----------------v~Dl-p~vi~~a~~------~~Ri~~~~gd~~~~~p--~~D~~~l~~--- 211 (287)
....+|||||||+ .+|. |..++.+++ .++++++.+|++++.+ .+|+|++.-
T Consensus 108 ~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~fD~Iv~npPy~ 187 (276)
T 2b3t_A 108 EQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSALAGQQFAMIVSNPPYI 187 (276)
T ss_dssp SSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGGGTTCCEEEEEECCCCB
T ss_pred cCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEcchhhhcccCCccEEEECCCCC
Confidence 4567999999999 4555 556666553 3589999999998653 499999873
Q ss_pred ----------ccccCCh----------HHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCCCCCCCHHHHHHHHHhCCC
Q 043585 212 ----------FFHAFGG----------EDSLKILKKCREAIAGNGQRGKVLIMDIVINEKEDEDQRTDKEWKTLFLDAGF 271 (287)
Q Consensus 212 ----------vlh~~~d----------~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~~~rt~~e~~~ll~~aGf 271 (287)
++++.+. +...++++++++.|+| ||.+++.. ...+.+++.++++++||
T Consensus 188 ~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~Lkp---gG~l~~~~---------~~~~~~~~~~~l~~~Gf 255 (276)
T 2b3t_A 188 DEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVS---GGFLLLEH---------GWQQGEAVRQAFILAGY 255 (276)
T ss_dssp CTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEE---EEEEEEEC---------CSSCHHHHHHHHHHTTC
T ss_pred CccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCC---CCEEEEEE---------CchHHHHHHHHHHHCCC
Confidence 4433321 3457899999999999 88888752 22457899999999999
Q ss_pred cEEEEEe-cCCc
Q 043585 272 TCCKITT-MFGL 282 (287)
Q Consensus 272 ~~~~~~~-~~~~ 282 (287)
+.+++.. ..|.
T Consensus 256 ~~v~~~~d~~g~ 267 (276)
T 2b3t_A 256 HDVETCRDYGDN 267 (276)
T ss_dssp TTCCEEECTTSS
T ss_pred cEEEEEecCCCC
Confidence 8776664 3443
No 111
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=98.44 E-value=1e-07 Score=88.55 Aligned_cols=89 Identities=11% Similarity=0.055 Sum_probs=68.3
Q ss_pred cccCcceEEEecCcc-----------------cccc-hhhhhcCCC---------------CCCceeeeccCcc-cC---
Q 043585 159 LIERLGSMVDVGGGN-----------------VLDL-PHAVANTPQ---------------TENLKYVADDMFQ-FI--- 201 (287)
Q Consensus 159 ~~~~~~~vlDvGgG~-----------------v~Dl-p~vi~~a~~---------------~~Ri~~~~gd~~~-~~--- 201 (287)
......+|||||||. .+|+ |.+++.|++ .++|+|+.||+++ ++
T Consensus 170 ~l~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD~~~lp~~d~ 249 (438)
T 3uwp_A 170 KMTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFLSEEWRER 249 (438)
T ss_dssp CCCTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECCTTSHHHHHH
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECcccCCccccc
Confidence 356678999999999 4665 444444431 3789999999998 54
Q ss_pred -CCCCeEEeccccccCChHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCC
Q 043585 202 -PPADAYFFMLFFHAFGGEDSLKILKKCREAIAGNGQRGKVLIMDIVINEKED 253 (287)
Q Consensus 202 -p~~D~~~l~~vlh~~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~ 253 (287)
+.+|+|++..++| + ++....|+++++.|+| ||+|++.|.+.+++..
T Consensus 250 ~~~aDVVf~Nn~~F-~--pdl~~aL~Ei~RvLKP---GGrIVssE~f~p~d~~ 296 (438)
T 3uwp_A 250 IANTSVIFVNNFAF-G--PEVDHQLKERFANMKE---GGRIVSSKPFAPLNFR 296 (438)
T ss_dssp HHTCSEEEECCTTC-C--HHHHHHHHHHHTTSCT---TCEEEESSCSSCTTCC
T ss_pred cCCccEEEEccccc-C--chHHHHHHHHHHcCCC---CcEEEEeecccCCCCC
Confidence 3599999887764 2 3456778899999999 9999999999887653
No 112
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=98.43 E-value=3.1e-07 Score=78.15 Aligned_cols=112 Identities=14% Similarity=0.145 Sum_probs=79.7
Q ss_pred ccCcceEEEecCc-c----------------cccc-hhhhhcCCC-----CCCceeeeccC--cccCC--CCCeEEeccc
Q 043585 160 IERLGSMVDVGGG-N----------------VLDL-PHAVANTPQ-----TENLKYVADDM--FQFIP--PADAYFFMLF 212 (287)
Q Consensus 160 ~~~~~~vlDvGgG-~----------------v~Dl-p~vi~~a~~-----~~Ri~~~~gd~--~~~~p--~~D~~~l~~v 212 (287)
.....+|||+||| . .+|. |.+++.+++ ..+++++.+|+ +.+++ .+|+|++.-.
T Consensus 53 ~~~~~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~I~~npp 132 (230)
T 3evz_A 53 LRGGEVALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFFEYARRNIERNNSNVRLVKSNGGIIKGVVEGTFDVIFSAPP 132 (230)
T ss_dssp CCSSCEEEEECCTTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHTTCCCEEEECSSCSSTTTCCSCEEEEEECCC
T ss_pred cCCCCEEEEcCCCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCchhhhhcccCceeEEEECCC
Confidence 4567899999999 6 5665 666666653 23899999996 44454 4999998877
Q ss_pred cccCChHH-----------------HHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCCCCCCCHHHHHHHHHhCCCcEEE
Q 043585 213 FHAFGGED-----------------SLKILKKCREAIAGNGQRGKVLIMDIVINEKEDEDQRTDKEWKTLFLDAGFTCCK 275 (287)
Q Consensus 213 lh~~~d~~-----------------~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~~~rt~~e~~~ll~~aGf~~~~ 275 (287)
+|..++.+ ..++|+.+++.|+| ||+++++-... ..+.+++.++++++||.+..
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkp---gG~l~~~~~~~-------~~~~~~~~~~l~~~g~~~~~ 202 (230)
T 3evz_A 133 YYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNP---GGKVALYLPDK-------EKLLNVIKERGIKLGYSVKD 202 (230)
T ss_dssp CC---------------CCSSSCHHHHHHHHHHGGGEEE---EEEEEEEEESC-------HHHHHHHHHHHHHTTCEEEE
T ss_pred CcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCC---CeEEEEEeccc-------HhHHHHHHHHHHHcCCceEE
Confidence 66554422 36899999999999 99999863221 12467899999999998877
Q ss_pred EEecCC
Q 043585 276 ITTMFG 281 (287)
Q Consensus 276 ~~~~~~ 281 (287)
+....|
T Consensus 203 ~~~~~g 208 (230)
T 3evz_A 203 IKFKVG 208 (230)
T ss_dssp EEECCC
T ss_pred EEecCC
Confidence 765555
No 113
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=98.43 E-value=1.3e-07 Score=79.18 Aligned_cols=98 Identities=15% Similarity=0.166 Sum_probs=73.6
Q ss_pred cCcceEEEecCcc----------------cccc-hhhhhcCCC----CCCceeeeccCcc-cCC--CCCeEEeccccccC
Q 043585 161 ERLGSMVDVGGGN----------------VLDL-PHAVANTPQ----TENLKYVADDMFQ-FIP--PADAYFFMLFFHAF 216 (287)
Q Consensus 161 ~~~~~vlDvGgG~----------------v~Dl-p~vi~~a~~----~~Ri~~~~gd~~~-~~p--~~D~~~l~~vlh~~ 216 (287)
....+|||||||. .+|. |.+++.+++ .++++++.+|+.+ +++ .+|+|++..++|..
T Consensus 41 ~~~~~vLdiGcG~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~~~~~ 120 (215)
T 2pxx_A 41 RPEDRILVLGCGNSALSYELFLGGFPNVTSVDYSSVVVAAMQACYAHVPQLRWETMDVRKLDFPSASFDVVLEKGTLDAL 120 (215)
T ss_dssp CTTCCEEEETCTTCSHHHHHHHTTCCCEEEEESCHHHHHHHHHHTTTCTTCEEEECCTTSCCSCSSCEEEEEEESHHHHH
T ss_pred CCCCeEEEECCCCcHHHHHHHHcCCCcEEEEeCCHHHHHHHHHhcccCCCcEEEEcchhcCCCCCCcccEEEECcchhhh
Confidence 5567999999998 4554 555555543 3689999999988 555 49999999988765
Q ss_pred C-------------hHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCCCCCCCHHHHHHHHHhCCC
Q 043585 217 G-------------GEDSLKILKKCREAIAGNGQRGKVLIMDIVINEKEDEDQRTDKEWKTLFLDAGF 271 (287)
Q Consensus 217 ~-------------d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~~~rt~~e~~~ll~~aGf 271 (287)
. .++..++|+++++.|+| ||++++.+...+ .-...++...|+
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkp---gG~li~~~~~~~----------~~~~~~~~~~~~ 175 (215)
T 2pxx_A 121 LAGERDPWTVSSEGVHTVDQVLSEVSRVLVP---GGRFISMTSAAP----------HFRTRHYAQAYY 175 (215)
T ss_dssp TTTCSCTTSCCHHHHHHHHHHHHHHHHHEEE---EEEEEEEESCCH----------HHHHHHHCCGGG
T ss_pred ccccccccccccchhHHHHHHHHHHHHhCcC---CCEEEEEeCCCc----------HHHHHHHhcccc
Confidence 5 55678999999999999 999999874322 233456666666
No 114
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=98.43 E-value=5.6e-08 Score=81.25 Aligned_cols=108 Identities=15% Similarity=0.123 Sum_probs=68.0
Q ss_pred cCcceEEEecCcc-----------------cccc-hhhhhcCCC-----CCCceeeeccCcccC-------CCCCeEEec
Q 043585 161 ERLGSMVDVGGGN-----------------VLDL-PHAVANTPQ-----TENLKYVADDMFQFI-------PPADAYFFM 210 (287)
Q Consensus 161 ~~~~~vlDvGgG~-----------------v~Dl-p~vi~~a~~-----~~Ri~~~~gd~~~~~-------p~~D~~~l~ 210 (287)
.+..+|||+|||+ .+|+ |.+++.+++ ..+++++.+|+.+++ ..+|+|++.
T Consensus 29 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~~n 108 (215)
T 4dzr_A 29 PSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFGAVVDWAAADGIEWLIERAERGRPWHAIVSN 108 (215)
T ss_dssp CTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC-------------------CCHHHHHHHHHHHHHTTCCBSEEEEC
T ss_pred CCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhCCceEEEEcchHhhhhhhhhccCcccEEEEC
Confidence 5678999999999 5666 667777764 117999999998843 349999995
Q ss_pred cc------cccCChHHH------------------HHHHHHHHHHhcCCCCCcEEEEEeeccCCCCCCCCCCHHHHHHHH
Q 043585 211 LF------FHAFGGEDS------------------LKILKKCREAIAGNGQRGKVLIMDIVINEKEDEDQRTDKEWKTLF 266 (287)
Q Consensus 211 ~v------lh~~~d~~~------------------~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~~~rt~~e~~~ll 266 (287)
-. +|.++++.. ..+++++++.|+| ||++++++.- ....+++.+++
T Consensus 109 pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkp---gG~l~~~~~~--------~~~~~~~~~~l 177 (215)
T 4dzr_A 109 PPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLAR---GRAGVFLEVG--------HNQADEVARLF 177 (215)
T ss_dssp CCCCC------------------------CTTHHHHHHHTCCGGGBCS---SSEEEEEECT--------TSCHHHHHHHT
T ss_pred CCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcC---CCeEEEEEEC--------CccHHHHHHHH
Confidence 43 333333332 6899999999999 9996666543 23478899999
Q ss_pred H--hCCCcEEEEEec
Q 043585 267 L--DAGFTCCKITTM 279 (287)
Q Consensus 267 ~--~aGf~~~~~~~~ 279 (287)
+ ++||..+++...
T Consensus 178 ~~~~~gf~~~~~~~~ 192 (215)
T 4dzr_A 178 APWRERGFRVRKVKD 192 (215)
T ss_dssp GGGGGGTEECCEEEC
T ss_pred HHhhcCCceEEEEEe
Confidence 9 999988777765
No 115
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=98.42 E-value=1.6e-07 Score=79.28 Aligned_cols=117 Identities=13% Similarity=0.152 Sum_probs=74.9
Q ss_pred cccCcceEEEecCcc-----------------cccc-hhhhhc----CCC------CCCceeeeccCcc-cCCC-CCeEE
Q 043585 159 LIERLGSMVDVGGGN-----------------VLDL-PHAVAN----TPQ------TENLKYVADDMFQ-FIPP-ADAYF 208 (287)
Q Consensus 159 ~~~~~~~vlDvGgG~-----------------v~Dl-p~vi~~----a~~------~~Ri~~~~gd~~~-~~p~-~D~~~ 208 (287)
......+|||||||. .+|+ |.+++. +++ .++++++.+|+.+ +++. .|.|.
T Consensus 24 ~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~d~v~ 103 (218)
T 3mq2_A 24 RSQYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERLPPLSGVGELH 103 (218)
T ss_dssp HTTSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTCCSCCCEEEEE
T ss_pred hccCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhCCCCCCCCEEE
Confidence 445678999999999 5676 554443 221 4589999999988 4442 36665
Q ss_pred ecc---cc--ccCChHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCC------CC----CCCCHHHHHHHHHhCCCcE
Q 043585 209 FML---FF--HAFGGEDSLKILKKCREAIAGNGQRGKVLIMDIVINEKE------DE----DQRTDKEWKTLFLDAGFTC 273 (287)
Q Consensus 209 l~~---vl--h~~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~------~~----~~rt~~e~~~ll~~aGf~~ 273 (287)
+.. .+ |+.++. ..+|+++++.|+| ||++++.-....-.. .. ..+..+++..+++++||++
T Consensus 104 ~~~~~~~~~~~~~~~~--~~~l~~~~~~Lkp---gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~i 178 (218)
T 3mq2_A 104 VLMPWGSLLRGVLGSS--PEMLRGMAAVCRP---GASFLVALNLHAWRPSVPEVGEHPEPTPDSADEWLAPRYAEAGWKL 178 (218)
T ss_dssp EESCCHHHHHHHHTSS--SHHHHHHHHTEEE---EEEEEEEEEGGGBTTBCGGGTTCCCCCHHHHHHHHHHHHHHTTEEE
T ss_pred EEccchhhhhhhhccH--HHHHHHHHHHcCC---CcEEEEEeccccccccccccccCCccchHHHHHHHHHHHHHcCCCc
Confidence 222 11 122222 5799999999999 899888432211100 00 1223455888999999999
Q ss_pred EEEEecC
Q 043585 274 CKITTMF 280 (287)
Q Consensus 274 ~~~~~~~ 280 (287)
.++....
T Consensus 179 ~~~~~~~ 185 (218)
T 3mq2_A 179 ADCRYLE 185 (218)
T ss_dssp EEEEEEC
T ss_pred eeeeccc
Confidence 8877653
No 116
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=98.41 E-value=6.1e-07 Score=76.84 Aligned_cols=117 Identities=13% Similarity=0.152 Sum_probs=75.6
Q ss_pred ccCcceEEEecCcc-----------------cccc--hhhhhcC---CC------CCCceeeeccCcccCCC--CCeEEe
Q 043585 160 IERLGSMVDVGGGN-----------------VLDL--PHAVANT---PQ------TENLKYVADDMFQFIPP--ADAYFF 209 (287)
Q Consensus 160 ~~~~~~vlDvGgG~-----------------v~Dl--p~vi~~a---~~------~~Ri~~~~gd~~~~~p~--~D~~~l 209 (287)
.....+|||||||. .+|+ +.+++.| ++ ..+++++.+|+... |. +|+|..
T Consensus 22 ~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~l-~~~~~d~v~~ 100 (225)
T 3p2e_A 22 GQFDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAESL-PFELKNIADS 100 (225)
T ss_dssp TTCSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTBC-CGGGTTCEEE
T ss_pred CCCCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHHh-hhhccCeEEE
Confidence 34567999999999 5776 3454444 43 35799999998763 42 476666
Q ss_pred ccccccCChHH------HHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCC-C------CCCCH-----HHHHHHHHhCCC
Q 043585 210 MLFFHAFGGED------SLKILKKCREAIAGNGQRGKVLIMDIVINEKED-E------DQRTD-----KEWKTLFLDAGF 271 (287)
Q Consensus 210 ~~vlh~~~d~~------~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~-~------~~rt~-----~e~~~ll~~aGf 271 (287)
..+.+.|+... ...+|+++++.|+| ||++++...+-..... + ...+. +|+.++++++||
T Consensus 101 i~~~~~~~~~~~~~~~~~~~~l~~~~r~Lkp---GG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~~aGf 177 (225)
T 3p2e_A 101 ISILFPWGTLLEYVIKPNRDILSNVADLAKK---EAHFEFVTTYSDSYEEAEIKKRGLPLLSKAYFLSEQYKAELSNSGF 177 (225)
T ss_dssp EEEESCCHHHHHHHHTTCHHHHHHHHTTEEE---EEEEEEEECCCC--------------CCHHHHHSHHHHHHHHHHTC
T ss_pred EEEeCCCcHHhhhhhcchHHHHHHHHHhcCC---CcEEEEEEeccccchhchhhhcCCCCCChhhcchHHHHHHHHHcCC
Confidence 55555454321 13589999999999 9999984332221100 0 11222 249999999999
Q ss_pred cEEEEEecC
Q 043585 272 TCCKITTMF 280 (287)
Q Consensus 272 ~~~~~~~~~ 280 (287)
++..+....
T Consensus 178 ~v~~~~~~~ 186 (225)
T 3p2e_A 178 RIDDVKELD 186 (225)
T ss_dssp EEEEEEEEC
T ss_pred CeeeeeecC
Confidence 998877653
No 117
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=98.40 E-value=1.9e-07 Score=80.86 Aligned_cols=103 Identities=11% Similarity=0.117 Sum_probs=79.7
Q ss_pred cccCcceEEEecCcc------------------cccc-hhhhhcCCC-------CCCceeeeccCcccCC--CCCeEEec
Q 043585 159 LIERLGSMVDVGGGN------------------VLDL-PHAVANTPQ-------TENLKYVADDMFQFIP--PADAYFFM 210 (287)
Q Consensus 159 ~~~~~~~vlDvGgG~------------------v~Dl-p~vi~~a~~-------~~Ri~~~~gd~~~~~p--~~D~~~l~ 210 (287)
+.....+|||+|||. .+|. |..++.+++ .+|++++.+|+.+.++ .+|+|++
T Consensus 90 ~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~v~~- 168 (255)
T 3mb5_A 90 GISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEGIEEENVDHVIL- 168 (255)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGCCCCCSEEEEEE-
T ss_pred CCCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhccCCCCcCEEEE-
Confidence 456778999999998 4665 666666653 4679999999998766 3999987
Q ss_pred cccccCChHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCCCCCCCHHHHHHHHHhCC--CcEEEEEec
Q 043585 211 LFFHAFGGEDSLKILKKCREAIAGNGQRGKVLIMDIVINEKEDEDQRTDKEWKTLFLDAG--FTCCKITTM 279 (287)
Q Consensus 211 ~vlh~~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~~~rt~~e~~~ll~~aG--f~~~~~~~~ 279 (287)
++++. ..+|++++++|+| ||++++...... ..+++.++++++| |..+++...
T Consensus 169 ----~~~~~--~~~l~~~~~~L~~---gG~l~~~~~~~~--------~~~~~~~~l~~~g~~f~~~~~~e~ 222 (255)
T 3mb5_A 169 ----DLPQP--ERVVEHAAKALKP---GGFFVAYTPCSN--------QVMRLHEKLREFKDYFMKPRTINV 222 (255)
T ss_dssp ----CSSCG--GGGHHHHHHHEEE---EEEEEEEESSHH--------HHHHHHHHHHHTGGGBSCCEEECC
T ss_pred ----CCCCH--HHHHHHHHHHcCC---CCEEEEEECCHH--------HHHHHHHHHHHcCCCccccEEEEE
Confidence 34443 4689999999999 999998764433 3678899999999 988777654
No 118
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=98.39 E-value=1.9e-07 Score=76.44 Aligned_cols=100 Identities=22% Similarity=0.304 Sum_probs=76.7
Q ss_pred cccCcceEEEecCcc---------------cccc-hhhhhcCCC-------CCCceeeeccCcccC---CCCCeEEeccc
Q 043585 159 LIERLGSMVDVGGGN---------------VLDL-PHAVANTPQ-------TENLKYVADDMFQFI---PPADAYFFMLF 212 (287)
Q Consensus 159 ~~~~~~~vlDvGgG~---------------v~Dl-p~vi~~a~~-------~~Ri~~~~gd~~~~~---p~~D~~~l~~v 212 (287)
......+|||+|||. .+|. |..++.+++ .+++++..+|+.+++ +.+|+|++..+
T Consensus 30 ~~~~~~~vldiG~G~G~~~~~l~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~ 109 (192)
T 1l3i_A 30 EPGKNDVAVDVGCGTGGVTLELAGRVRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEALCKIPDIDIAVVGGS 109 (192)
T ss_dssp CCCTTCEEEEESCTTSHHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHHHTTSCCEEEEEESCC
T ss_pred CCCCCCEEEEECCCCCHHHHHHHHhcCEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHHhcccCCCCCEEEECCc
Confidence 345668999999998 4555 556665543 268999999987743 35999999988
Q ss_pred cccCChHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCCCCCCCHHHHHHHHHhCCCcEE
Q 043585 213 FHAFGGEDSLKILKKCREAIAGNGQRGKVLIMDIVINEKEDEDQRTDKEWKTLFLDAGFTCC 274 (287)
Q Consensus 213 lh~~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~~~rt~~e~~~ll~~aGf~~~ 274 (287)
+|++ ..+|+++++.|+| ||++++..... .+..++.+++++.||.+.
T Consensus 110 ~~~~-----~~~l~~~~~~l~~---gG~l~~~~~~~--------~~~~~~~~~l~~~g~~~~ 155 (192)
T 1l3i_A 110 GGEL-----QEILRIIKDKLKP---GGRIIVTAILL--------ETKFEAMECLRDLGFDVN 155 (192)
T ss_dssp TTCH-----HHHHHHHHHTEEE---EEEEEEEECBH--------HHHHHHHHHHHHTTCCCE
T ss_pred hHHH-----HHHHHHHHHhcCC---CcEEEEEecCc--------chHHHHHHHHHHCCCceE
Confidence 8643 6799999999999 89998876533 246788999999999543
No 119
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=98.38 E-value=1.3e-06 Score=87.29 Aligned_cols=82 Identities=11% Similarity=0.192 Sum_probs=66.3
Q ss_pred cCcceEEEecCcc------------------cccc-hhhhhcCCC------------CCCceeeeccCcc-cCC--CCCe
Q 043585 161 ERLGSMVDVGGGN------------------VLDL-PHAVANTPQ------------TENLKYVADDMFQ-FIP--PADA 206 (287)
Q Consensus 161 ~~~~~vlDvGgG~------------------v~Dl-p~vi~~a~~------------~~Ri~~~~gd~~~-~~p--~~D~ 206 (287)
.+..+|||||||. .+|+ +.+++.|++ ..+|+++.+|+.+ +.+ .||+
T Consensus 720 ~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dLp~~d~sFDl 799 (950)
T 3htx_A 720 SSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEFDSRLHDVDI 799 (950)
T ss_dssp SCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSCCTTSCSCCE
T ss_pred cCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHhCCcccCCeeE
Confidence 3678999999999 3555 556665532 3579999999988 444 4999
Q ss_pred EEeccccccCChHHHHHHHHHHHHHhcCCCCCcEEEEEee
Q 043585 207 YFFMLFFHAFGGEDSLKILKKCREAIAGNGQRGKVLIMDI 246 (287)
Q Consensus 207 ~~l~~vlh~~~d~~~~~iL~~~~~al~~~~~~g~lli~e~ 246 (287)
|++..++|++++++...+++++++.|+| | .++|..+
T Consensus 800 VV~~eVLeHL~dp~l~~~L~eI~RvLKP---G-~LIISTP 835 (950)
T 3htx_A 800 GTCLEVIEHMEEDQACEFGEKVLSLFHP---K-LLIVSTP 835 (950)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHTTCC---S-EEEEEEC
T ss_pred EEEeCchhhCChHHHHHHHHHHHHHcCC---C-EEEEEec
Confidence 9999999999999988999999999999 6 6666553
No 120
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=98.38 E-value=4.9e-07 Score=73.44 Aligned_cols=99 Identities=17% Similarity=0.219 Sum_probs=75.3
Q ss_pred cccCcceEEEecCcc---------------cccc-hhhhhcCCC------CCCceeeeccCcccCC--CCCeEEeccccc
Q 043585 159 LIERLGSMVDVGGGN---------------VLDL-PHAVANTPQ------TENLKYVADDMFQFIP--PADAYFFMLFFH 214 (287)
Q Consensus 159 ~~~~~~~vlDvGgG~---------------v~Dl-p~vi~~a~~------~~Ri~~~~gd~~~~~p--~~D~~~l~~vlh 214 (287)
......+|||+|||. .+|. |.+++.+++ .++++++.+|+.++++ .+|+|++..+
T Consensus 32 ~~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~i~~~~~-- 109 (183)
T 2yxd_A 32 NLNKDDVVVDVGCGSGGMTVEIAKRCKFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAEDVLDKLEFNKAFIGGT-- 109 (183)
T ss_dssp CCCTTCEEEEESCCCSHHHHHHHTTSSEEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHHHGGGCCCSEEEECSC--
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCccccccCCCCcEEEECCc--
Confidence 345667999999999 4565 556666553 2689999999988655 5999999988
Q ss_pred cCChHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCCCCCCCHHHHHHHHHhCCCcEEEE
Q 043585 215 AFGGEDSLKILKKCREAIAGNGQRGKVLIMDIVINEKEDEDQRTDKEWKTLFLDAGFTCCKI 276 (287)
Q Consensus 215 ~~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~~~rt~~e~~~ll~~aGf~~~~~ 276 (287)
++...+++++++. | ||++++...... +..++.++++++||.+..+
T Consensus 110 ----~~~~~~l~~~~~~--~---gG~l~~~~~~~~--------~~~~~~~~l~~~g~~~~~~ 154 (183)
T 2yxd_A 110 ----KNIEKIIEILDKK--K---INHIVANTIVLE--------NAAKIINEFESRGYNVDAV 154 (183)
T ss_dssp ----SCHHHHHHHHHHT--T---CCEEEEEESCHH--------HHHHHHHHHHHTTCEEEEE
T ss_pred ----ccHHHHHHHHhhC--C---CCEEEEEecccc--------cHHHHHHHHHHcCCeEEEE
Confidence 3345788888887 7 899999874332 3678999999999876655
No 121
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=98.38 E-value=1.9e-07 Score=82.62 Aligned_cols=52 Identities=15% Similarity=0.255 Sum_probs=47.4
Q ss_pred CceeeeccCcc-cCC---CCCeEEeccccccCChHHHHHHHHHHHHHhcCCCCCcEEEE
Q 043585 189 NLKYVADDMFQ-FIP---PADAYFFMLFFHAFGGEDSLKILKKCREAIAGNGQRGKVLI 243 (287)
Q Consensus 189 Ri~~~~gd~~~-~~p---~~D~~~l~~vlh~~~d~~~~~iL~~~~~al~~~~~~g~lli 243 (287)
+|+|..+|+.+ ++| .+|+|+++++||+++++...+++++++++|+| ||.|++
T Consensus 195 ~V~F~~~dl~~~~~~~~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~p---gG~L~l 250 (274)
T 1af7_A 195 YVEFSSVNLLEKQYNVPGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKP---DGLLFA 250 (274)
T ss_dssp TEEEEECCTTCSSCCCCCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEEE---EEEEEE
T ss_pred cCeEEecccCCCCCCcCCCeeEEEECCchHhCCHHHHHHHHHHHHHHhCC---CcEEEE
Confidence 79999999998 455 49999999999999999999999999999999 888876
No 122
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=98.38 E-value=3.1e-07 Score=80.61 Aligned_cols=81 Identities=15% Similarity=0.188 Sum_probs=61.0
Q ss_pred cccCcceEEEecCcc---------------cccc-hhhhhcCCC--CCCceeeeccCcc-c------CC-CCCeEEeccc
Q 043585 159 LIERLGSMVDVGGGN---------------VLDL-PHAVANTPQ--TENLKYVADDMFQ-F------IP-PADAYFFMLF 212 (287)
Q Consensus 159 ~~~~~~~vlDvGgG~---------------v~Dl-p~vi~~a~~--~~Ri~~~~gd~~~-~------~p-~~D~~~l~~v 212 (287)
......+|||||||+ .+|. |.+++.+++ ... ++.+++.+ + .+ .||+|++..+
T Consensus 42 ~l~~g~~VLDlGcGtG~~a~~La~~g~~V~gvD~S~~ml~~Ar~~~~~~--~v~~~~~~~~~~~~~~~~~~fD~Vv~~~~ 119 (261)
T 3iv6_A 42 NIVPGSTVAVIGASTRFLIEKALERGASVTVFDFSQRMCDDLAEALADR--CVTIDLLDITAEIPKELAGHFDFVLNDRL 119 (261)
T ss_dssp TCCTTCEEEEECTTCHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTSSS--CCEEEECCTTSCCCGGGTTCCSEEEEESC
T ss_pred CCCCcCEEEEEeCcchHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHhc--cceeeeeecccccccccCCCccEEEEhhh
Confidence 456678999999999 5676 667777654 111 23333322 1 12 5999999999
Q ss_pred cccCChHHHHHHHHHHHHHhcCCCCCcEEEEEe
Q 043585 213 FHAFGGEDSLKILKKCREAIAGNGQRGKVLIMD 245 (287)
Q Consensus 213 lh~~~d~~~~~iL~~~~~al~~~~~~g~lli~e 245 (287)
+|+++.++....|+++++.| | ||++++.-
T Consensus 120 l~~~~~~~~~~~l~~l~~lL-P---GG~l~lS~ 148 (261)
T 3iv6_A 120 INRFTTEEARRACLGMLSLV-G---SGTVRASV 148 (261)
T ss_dssp GGGSCHHHHHHHHHHHHHHH-T---TSEEEEEE
T ss_pred hHhCCHHHHHHHHHHHHHhC-c---CcEEEEEe
Confidence 99999999999999999999 9 99998763
No 123
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=98.34 E-value=1.7e-07 Score=78.20 Aligned_cols=114 Identities=10% Similarity=0.103 Sum_probs=75.8
Q ss_pred ccCcceEEEecCcc-----------------cccc-hhhhhcCCC-------CCCceeeeccCccc-CCC-CCeEEeccc
Q 043585 160 IERLGSMVDVGGGN-----------------VLDL-PHAVANTPQ-------TENLKYVADDMFQF-IPP-ADAYFFMLF 212 (287)
Q Consensus 160 ~~~~~~vlDvGgG~-----------------v~Dl-p~vi~~a~~-------~~Ri~~~~gd~~~~-~p~-~D~~~l~~v 212 (287)
.....+|||+|||. ..|. +.+++.+++ ..++++ .|..+. .|+ ||+|+...+
T Consensus 47 l~~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~--~d~~~~~~~~~~DvVLa~k~ 124 (200)
T 3fzg_A 47 IKHVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRF--LNKESDVYKGTYDVVFLLKM 124 (200)
T ss_dssp SCCCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCCSSEEEE--ECCHHHHTTSEEEEEEEETC
T ss_pred cCCCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCccEEE--ecccccCCCCCcChhhHhhH
Confidence 35688999999999 4565 566666653 225555 777664 343 999999999
Q ss_pred cccCChHHHHHHHHHHHHHhcCCCCCcEEEEEe--eccCCCCCCCCCCHHHHHHHHHhCCCcEEEEEecCC
Q 043585 213 FHAFGGEDSLKILKKCREAIAGNGQRGKVLIMD--IVINEKEDEDQRTDKEWKTLFLDAGFTCCKITTMFG 281 (287)
Q Consensus 213 lh~~~d~~~~~iL~~~~~al~~~~~~g~lli~e--~~~~~~~~~~~rt~~e~~~ll~~aGf~~~~~~~~~~ 281 (287)
||.. ++ ....+.+++++|+| ||.++-.+ .+-...+...+.-...|.+.+ ...+.+++...+++
T Consensus 125 LHlL-~~-~~~al~~v~~~L~p---ggvfISfptksl~Gr~~gm~~~Y~~~~~~~~-~~~~~~~~~~~~~n 189 (200)
T 3fzg_A 125 LPVL-KQ-QDVNILDFLQLFHT---QNFVISFPIKSLSGKEKGMEENYQLWFESFT-KGWIKILDSKVIGN 189 (200)
T ss_dssp HHHH-HH-TTCCHHHHHHTCEE---EEEEEEEECCCCC--CTTCCCCHHHHHHHHT-TTTSCEEEEEEETT
T ss_pred HHhh-hh-hHHHHHHHHHHhCC---CCEEEEeChHHhcCCCcchhhhHHHHHHHhc-cCcceeeeeeeeCc
Confidence 9999 43 34556699999999 77776676 333332222444456677777 55666666665543
No 124
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=98.33 E-value=1.8e-07 Score=89.15 Aligned_cols=82 Identities=12% Similarity=0.133 Sum_probs=67.6
Q ss_pred cccCcceEEEecCcc----------------cccchhhhhcCCC-------CCCceeeeccCcc-cCC-CCCeEEecccc
Q 043585 159 LIERLGSMVDVGGGN----------------VLDLPHAVANTPQ-------TENLKYVADDMFQ-FIP-PADAYFFMLFF 213 (287)
Q Consensus 159 ~~~~~~~vlDvGgG~----------------v~Dlp~vi~~a~~-------~~Ri~~~~gd~~~-~~p-~~D~~~l~~vl 213 (287)
...+..+|||||||. .+|..++++.|++ .+||+++.+|+.+ +.| .+|+|++..++
T Consensus 155 ~~~~~~~VLDiGcGtG~la~~la~~~~~~V~gvD~s~~l~~A~~~~~~~gl~~~v~~~~~d~~~~~~~~~fD~Ivs~~~~ 234 (480)
T 3b3j_A 155 TDFKDKIVLDVGCGSGILSFFAAQAGARKIYAVEASTMAQHAEVLVKSNNLTDRIVVIPGKVEEVSLPEQVDIIISEPMG 234 (480)
T ss_dssp GGTTTCEEEEESCSTTHHHHHHHHTTCSEEEEEECHHHHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSCEEEEECCCCH
T ss_pred hhcCCCEEEEecCcccHHHHHHHHcCCCEEEEEEcHHHHHHHHHHHHHcCCCCcEEEEECchhhCccCCCeEEEEEeCch
Confidence 344568999999999 5777666666553 4799999999998 666 49999998888
Q ss_pred ccCChHHHHHHHHHHHHHhcCCCCCcEEEE
Q 043585 214 HAFGGEDSLKILKKCREAIAGNGQRGKVLI 243 (287)
Q Consensus 214 h~~~d~~~~~iL~~~~~al~~~~~~g~lli 243 (287)
|.+.+++....+.++++.|+| ||.+++
T Consensus 235 ~~~~~e~~~~~l~~~~~~Lkp---gG~li~ 261 (480)
T 3b3j_A 235 YMLFNERMLESYLHAKKYLKP---SGNMFP 261 (480)
T ss_dssp HHHTCHHHHHHHHHGGGGEEE---EEEEES
T ss_pred HhcCcHHHHHHHHHHHHhcCC---CCEEEE
Confidence 999888888899999999999 888874
No 125
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=98.32 E-value=3.1e-07 Score=78.56 Aligned_cols=113 Identities=12% Similarity=0.112 Sum_probs=74.6
Q ss_pred cccCcceEEEecCcc------------------cccc-hh----hhhcCCCCCCceeeeccCccc--CC----CCCeEEe
Q 043585 159 LIERLGSMVDVGGGN------------------VLDL-PH----AVANTPQTENLKYVADDMFQF--IP----PADAYFF 209 (287)
Q Consensus 159 ~~~~~~~vlDvGgG~------------------v~Dl-p~----vi~~a~~~~Ri~~~~gd~~~~--~p----~~D~~~l 209 (287)
......+|||+|||. .+|. |. .++.++...+++++.+|+.++ +| .+|+|++
T Consensus 74 ~~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~~~~D~V~~ 153 (233)
T 2ipx_A 74 HIKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKRTNIIPVIEDARHPHKYRMLIAMVDVIFA 153 (233)
T ss_dssp CCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHCTTEEEECSCTTCGGGGGGGCCCEEEEEE
T ss_pred cCCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhccCCeEEEEcccCChhhhcccCCcEEEEEE
Confidence 355678999999999 3454 22 233333358899999999873 22 4899998
Q ss_pred ccccccCChHHHHHHHHHHHHHhcCCCCCcEEEEEeeccC--CCCCC-CCCCHHHHHHHHHhCCCcEEEEEecC
Q 043585 210 MLFFHAFGGEDSLKILKKCREAIAGNGQRGKVLIMDIVIN--EKEDE-DQRTDKEWKTLFLDAGFTCCKITTMF 280 (287)
Q Consensus 210 ~~vlh~~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~--~~~~~-~~rt~~e~~~ll~~aGf~~~~~~~~~ 280 (287)
... ..++...+++++++.|+| ||++++ ..... +...+ ..+...+ .++|+++||+++++.+..
T Consensus 154 ~~~----~~~~~~~~~~~~~~~Lkp---gG~l~i-~~~~~~~~~~~~~~~~~~~~-~~~l~~~Gf~~~~~~~~~ 218 (233)
T 2ipx_A 154 DVA----QPDQTRIVALNAHTFLRN---GGHFVI-SIKANCIDSTASAEAVFASE-VKKMQQENMKPQEQLTLE 218 (233)
T ss_dssp CCC----CTTHHHHHHHHHHHHEEE---EEEEEE-EEEHHHHCSSSCHHHHHHHH-HHTTGGGTEEEEEEEECT
T ss_pred cCC----CccHHHHHHHHHHHHcCC---CeEEEE-EEcccccccCCCHHHHHHHH-HHHHHHCCCceEEEEecC
Confidence 433 344556789999999999 888888 32221 11111 1111223 688999999999877663
No 126
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=98.31 E-value=2.6e-07 Score=76.67 Aligned_cols=117 Identities=19% Similarity=0.225 Sum_probs=77.4
Q ss_pred ccCcceEEEecCcc------------------cccc-hhhhhcCCC-------CCCceeeeccCcc-c-CC--CCCeEEe
Q 043585 160 IERLGSMVDVGGGN------------------VLDL-PHAVANTPQ-------TENLKYVADDMFQ-F-IP--PADAYFF 209 (287)
Q Consensus 160 ~~~~~~vlDvGgG~------------------v~Dl-p~vi~~a~~-------~~Ri~~~~gd~~~-~-~p--~~D~~~l 209 (287)
.....+|||+|||. .+|. |..++.+++ .++++++.+|+.+ + .+ .+|+|++
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~ 99 (197)
T 3eey_A 20 VKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVKAVMF 99 (197)
T ss_dssp CCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCEEEEEE
T ss_pred CCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCceEEEE
Confidence 45567999999999 4554 555665543 3689999999876 2 32 4999998
Q ss_pred cccc-------ccCChHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCCCCCCCHHHHHHHHHhCCCcEEEEEec
Q 043585 210 MLFF-------HAFGGEDSLKILKKCREAIAGNGQRGKVLIMDIVINEKEDEDQRTDKEWKTLFLDAGFTCCKITTM 279 (287)
Q Consensus 210 ~~vl-------h~~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~~~rt~~e~~~ll~~aGf~~~~~~~~ 279 (287)
...+ +....++..++|+++++.|+| ||++++......+.+........+|.+.+...+|++.+....
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~---gG~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~v~~~~~~ 173 (197)
T 3eey_A 100 NLGYLPSGDHSISTRPETTIQALSKAMELLVT---GGIITVVIYYGGDTGFEEKEKVLEFLKGVDQKKFIVQRTDFI 173 (197)
T ss_dssp EESBCTTSCTTCBCCHHHHHHHHHHHHHHEEE---EEEEEEEECCBTTTBSHHHHHHHHHHTTSCTTTEEEEEEEET
T ss_pred cCCcccCcccccccCcccHHHHHHHHHHhCcC---CCEEEEEEccCCCCcHHHHHHHHHHHHhCCCCcEEEEEEEec
Confidence 7655 122344567799999999999 999998875543322111112333433344567888777665
No 127
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=98.30 E-value=2.3e-06 Score=78.77 Aligned_cols=105 Identities=13% Similarity=0.120 Sum_probs=80.3
Q ss_pred CcceEEEecCcc-----------------cccc-hhhhhcCCC------CCCceeeeccCcccCC-----CCCeEEeccc
Q 043585 162 RLGSMVDVGGGN-----------------VLDL-PHAVANTPQ------TENLKYVADDMFQFIP-----PADAYFFMLF 212 (287)
Q Consensus 162 ~~~~vlDvGgG~-----------------v~Dl-p~vi~~a~~------~~Ri~~~~gd~~~~~p-----~~D~~~l~~v 212 (287)
...+||||| |. .+|+ |.+++.+++ .+||+++.+|+.+++| .||+|++...
T Consensus 172 ~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g~~~v~~~~~D~~~~l~~~~~~~fD~Vi~~~p 250 (373)
T 2qm3_A 172 ENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGYEDIEIFTFDLRKPLPDYALHKFDTFITDPP 250 (373)
T ss_dssp TTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHTCCCEEEECCCTTSCCCTTTSSCBSEEEECCC
T ss_pred CCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCEEEEEChhhhhchhhccCCccEEEECCC
Confidence 457999999 87 6787 788887764 2389999999988543 4999999888
Q ss_pred cccCChHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCCCCCCCH---HHHHHHHH-hCCCcEEEEEec
Q 043585 213 FHAFGGEDSLKILKKCREAIAGNGQRGKVLIMDIVINEKEDEDQRTD---KEWKTLFL-DAGFTCCKITTM 279 (287)
Q Consensus 213 lh~~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~~~rt~---~e~~~ll~-~aGf~~~~~~~~ 279 (287)
+|... ...+|++++++|+| ||++++++.... ..+. .+..+.+. +.||++..+.+.
T Consensus 251 ~~~~~---~~~~l~~~~~~Lkp---gG~~~~~~~~~~------~~~~~~~~~~~~~l~~~~g~~~~~~~~~ 309 (373)
T 2qm3_A 251 ETLEA---IRAFVGRGIATLKG---PRCAGYFGITRR------ESSLDKWREIQKLLLNEFNVVITDIIRN 309 (373)
T ss_dssp SSHHH---HHHHHHHHHHTBCS---TTCEEEEEECTT------TCCHHHHHHHHHHHHHTSCCEEEEEEEE
T ss_pred CchHH---HHHHHHHHHHHccc---CCeEEEEEEecC------cCCHHHHHHHHHHHHHhcCcchhhhhhh
Confidence 77653 47899999999999 998877765431 2234 56778888 899988776653
No 128
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=98.30 E-value=3.2e-07 Score=78.97 Aligned_cols=103 Identities=14% Similarity=0.130 Sum_probs=74.9
Q ss_pred cCcceEEEecCcc-----------------cccc-hhhhhcCCC------CCCceeeeccCcc-cC----C-CCCeEEec
Q 043585 161 ERLGSMVDVGGGN-----------------VLDL-PHAVANTPQ------TENLKYVADDMFQ-FI----P-PADAYFFM 210 (287)
Q Consensus 161 ~~~~~vlDvGgG~-----------------v~Dl-p~vi~~a~~------~~Ri~~~~gd~~~-~~----p-~~D~~~l~ 210 (287)
....+|||||||. .+|. |.+++.+++ .++|+++.+|+.+ +. + .||+|++.
T Consensus 69 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~~ 148 (240)
T 1xdz_A 69 NQVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQRKDVRESYDIVTAR 148 (240)
T ss_dssp GGCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHTTCTTTTTCEEEEEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHhcccccccCCccEEEEe
Confidence 4678999999999 4555 555555543 3469999999877 43 2 49999987
Q ss_pred cccccCChHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCCCCCCCHHHHHHHHHhCCCcEEEEEe
Q 043585 211 LFFHAFGGEDSLKILKKCREAIAGNGQRGKVLIMDIVINEKEDEDQRTDKEWKTLFLDAGFTCCKITT 278 (287)
Q Consensus 211 ~vlh~~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~~~rt~~e~~~ll~~aGf~~~~~~~ 278 (287)
.+ . +...+++.+++.|+| ||++++.+.... ....+++.+.++++||++.++..
T Consensus 149 ~~----~--~~~~~l~~~~~~Lkp---gG~l~~~~g~~~------~~~~~~~~~~l~~~g~~~~~~~~ 201 (240)
T 1xdz_A 149 AV----A--RLSVLSELCLPLVKK---NGLFVALKAASA------EEELNAGKKAITTLGGELENIHS 201 (240)
T ss_dssp CC----S--CHHHHHHHHGGGEEE---EEEEEEEECC-C------HHHHHHHHHHHHHTTEEEEEEEE
T ss_pred cc----C--CHHHHHHHHHHhcCC---CCEEEEEeCCCc------hHHHHHHHHHHHHcCCeEeEEEE
Confidence 73 2 246899999999999 999988743221 11245778889999999877664
No 129
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=98.28 E-value=6e-07 Score=77.50 Aligned_cols=102 Identities=15% Similarity=0.147 Sum_probs=76.8
Q ss_pred cccCcceEEEecCcc------------------cccc-hhhhhcCCC-------CCCceeeeccCccc-CC--CCCeEEe
Q 043585 159 LIERLGSMVDVGGGN------------------VLDL-PHAVANTPQ-------TENLKYVADDMFQF-IP--PADAYFF 209 (287)
Q Consensus 159 ~~~~~~~vlDvGgG~------------------v~Dl-p~vi~~a~~-------~~Ri~~~~gd~~~~-~p--~~D~~~l 209 (287)
+.....+|||+|||. .+|. |..++.+++ .+++++..+|+.+. ++ .+|+|++
T Consensus 93 ~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~~~~~~D~v~~ 172 (258)
T 2pwy_A 93 DLAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEAELEEAAYDGVAL 172 (258)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGCCCCTTCEEEEEE
T ss_pred CCCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCCCCcCEEEE
Confidence 456778999999998 4554 555555543 26899999999884 66 3999987
Q ss_pred ccccccCChHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCCCCCCCHHHHHHHHHhCCCcEEEEEe
Q 043585 210 MLFFHAFGGEDSLKILKKCREAIAGNGQRGKVLIMDIVINEKEDEDQRTDKEWKTLFLDAGFTCCKITT 278 (287)
Q Consensus 210 ~~vlh~~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~~~rt~~e~~~ll~~aGf~~~~~~~ 278 (287)
++++. ..+|++++++|+| ||++++...... ...++.+.++++||...++..
T Consensus 173 -----~~~~~--~~~l~~~~~~L~~---gG~l~~~~~~~~--------~~~~~~~~l~~~gf~~~~~~~ 223 (258)
T 2pwy_A 173 -----DLMEP--WKVLEKAALALKP---DRFLVAYLPNIT--------QVLELVRAAEAHPFRLERVLE 223 (258)
T ss_dssp -----ESSCG--GGGHHHHHHHEEE---EEEEEEEESCHH--------HHHHHHHHHTTTTEEEEEEEE
T ss_pred -----CCcCH--HHHHHHHHHhCCC---CCEEEEEeCCHH--------HHHHHHHHHHHCCCceEEEEE
Confidence 34443 3789999999999 999999874332 356788888899999876665
No 130
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=98.27 E-value=5.1e-07 Score=78.88 Aligned_cols=113 Identities=10% Similarity=0.098 Sum_probs=81.1
Q ss_pred cCcceEEEecCcc-----------------cccc-hhhhhcCCC-----CCCceeeeccCcccCC--CCCeEEecccccc
Q 043585 161 ERLGSMVDVGGGN-----------------VLDL-PHAVANTPQ-----TENLKYVADDMFQFIP--PADAYFFMLFFHA 215 (287)
Q Consensus 161 ~~~~~vlDvGgG~-----------------v~Dl-p~vi~~a~~-----~~Ri~~~~gd~~~~~p--~~D~~~l~~vlh~ 215 (287)
..+.+|||||||. .+|. +..++.+++ ..+.++...|+....| .+|++++.-++|+
T Consensus 131 ~~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g~~~~~~v~D~~~~~p~~~~DvaL~lkti~~ 210 (281)
T 3lcv_B 131 PRPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLNVPHRTNVADLLEDRLDEPADVTLLLKTLPC 210 (281)
T ss_dssp CCCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTTCCEEEEECCTTTSCCCSCCSEEEETTCHHH
T ss_pred CCCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEeeecccCCCCCcchHHHHHHHHH
Confidence 4578999999999 4554 445555543 5668899999999544 4999999999999
Q ss_pred CChHHHHHHHHHHHHHhcCCCCCcEEEEEee--ccCCCCCCCCCCHHHHHHHHHhCCCcEEEEE
Q 043585 216 FGGEDSLKILKKCREAIAGNGQRGKVLIMDI--VINEKEDEDQRTDKEWKTLFLDAGFTCCKIT 277 (287)
Q Consensus 216 ~~d~~~~~iL~~~~~al~~~~~~g~lli~e~--~~~~~~~~~~rt~~e~~~ll~~aGf~~~~~~ 277 (287)
..+++-...+ ++.++|++ +|.++..+. +-..++...+.-...|.+++.+.|+.+.++.
T Consensus 211 Le~q~kg~g~-~ll~aL~~---~~vvVSfp~ksl~Grs~gm~~~Y~~~~e~~~~~~g~~~~~~~ 270 (281)
T 3lcv_B 211 LETQQRGSGW-EVIDIVNS---PNIVVTFPTKSLGQRSKGMFQNYSQSFESQARERSCRIQRLE 270 (281)
T ss_dssp HHHHSTTHHH-HHHHHSSC---SEEEEEEECC-------CHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred hhhhhhHHHH-HHHHHhCC---CCEEEeccchhhcCCCcchhhHHHHHHHHHHHhcCCceeeee
Confidence 9998877787 89999999 666666665 2232222234446788888888999655544
No 131
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=98.27 E-value=1.7e-06 Score=75.22 Aligned_cols=108 Identities=13% Similarity=0.158 Sum_probs=78.8
Q ss_pred cc-CcceEEEecCcc----------------cccc-hhhhhcCCC-------CCCceeeeccCccc---CC--CCCeEEe
Q 043585 160 IE-RLGSMVDVGGGN----------------VLDL-PHAVANTPQ-------TENLKYVADDMFQF---IP--PADAYFF 209 (287)
Q Consensus 160 ~~-~~~~vlDvGgG~----------------v~Dl-p~vi~~a~~-------~~Ri~~~~gd~~~~---~p--~~D~~~l 209 (287)
.. ...+|||+|||. .+|+ |.+++.+++ .+|++++.+|+.+. ++ .||+|++
T Consensus 46 ~~~~~~~vLDlG~G~G~~~~~la~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~~~~~fD~Ii~ 125 (259)
T 3lpm_A 46 LPIRKGKIIDLCSGNGIIPLLLSTRTKAKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIPKERADIVTC 125 (259)
T ss_dssp CCSSCCEEEETTCTTTHHHHHHHTTCCCEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTSCTTCEEEEEE
T ss_pred CCCCCCEEEEcCCchhHHHHHHHHhcCCcEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhhccCCccEEEE
Confidence 45 678999999999 5665 566666543 56899999999883 33 4999998
Q ss_pred ccccccC------------------ChHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCCCCCCCHHHHHHHHHhCCC
Q 043585 210 MLFFHAF------------------GGEDSLKILKKCREAIAGNGQRGKVLIMDIVINEKEDEDQRTDKEWKTLFLDAGF 271 (287)
Q Consensus 210 ~~vlh~~------------------~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~~~rt~~e~~~ll~~aGf 271 (287)
.-.++.. .......+++.+++.|+| ||+++++- +. ....++..++++.||
T Consensus 126 npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~Lkp---gG~l~~~~---~~------~~~~~~~~~l~~~~~ 193 (259)
T 3lpm_A 126 NPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQ---GGKANFVH---RP------ERLLDIIDIMRKYRL 193 (259)
T ss_dssp CCCC-----------------------HHHHHHHHHHHHHEEE---EEEEEEEE---CT------TTHHHHHHHHHHTTE
T ss_pred CCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccC---CcEEEEEE---cH------HHHHHHHHHHHHCCC
Confidence 5443322 113456799999999999 99999842 21 347889999999999
Q ss_pred cEEEEEec
Q 043585 272 TCCKITTM 279 (287)
Q Consensus 272 ~~~~~~~~ 279 (287)
...++.++
T Consensus 194 ~~~~~~~v 201 (259)
T 3lpm_A 194 EPKRIQFV 201 (259)
T ss_dssp EEEEEEEE
T ss_pred ceEEEEEe
Confidence 98877665
No 132
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=98.27 E-value=1.9e-06 Score=73.98 Aligned_cols=100 Identities=12% Similarity=0.187 Sum_probs=77.0
Q ss_pred cCcceEEEecCcc-----------------cccc-hhhhhcCCC-------CCCceeeeccCcccCC---CCCeEEeccc
Q 043585 161 ERLGSMVDVGGGN-----------------VLDL-PHAVANTPQ-------TENLKYVADDMFQFIP---PADAYFFMLF 212 (287)
Q Consensus 161 ~~~~~vlDvGgG~-----------------v~Dl-p~vi~~a~~-------~~Ri~~~~gd~~~~~p---~~D~~~l~~v 212 (287)
.+..+|+|||||+ .+|. |..++.|++ .+||++..+|.+++++ .+|+|++..+
T Consensus 14 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l~~~~~~D~IviaG~ 93 (225)
T 3kr9_A 14 SQGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAFEETDQVSVITIAGM 93 (225)
T ss_dssp CTTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhhcccCcCCCEEEEcCC
Confidence 4567999999999 4555 556666553 5789999999998765 4999998765
Q ss_pred cccCChHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCCCCCCCHHHHHHHHHhCCCcEEEEE
Q 043585 213 FHAFGGEDSLKILKKCREAIAGNGQRGKVLIMDIVINEKEDEDQRTDKEWKTLFLDAGFTCCKIT 277 (287)
Q Consensus 213 lh~~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~~~rt~~e~~~ll~~aGf~~~~~~ 277 (287)
.-+-...||..+.+.|++ +|++++ .+.. .....++||.+.||.+.+..
T Consensus 94 ----Gg~~i~~Il~~~~~~L~~---~~~lVl-q~~~---------~~~~vr~~L~~~Gf~i~~e~ 141 (225)
T 3kr9_A 94 ----GGRLIARILEEGLGKLAN---VERLIL-QPNN---------REDDLRIWLQDHGFQIVAES 141 (225)
T ss_dssp ----CHHHHHHHHHHTGGGCTT---CCEEEE-EESS---------CHHHHHHHHHHTTEEEEEEE
T ss_pred ----ChHHHHHHHHHHHHHhCC---CCEEEE-ECCC---------CHHHHHHHHHHCCCEEEEEE
Confidence 334467899999999999 888776 4331 37789999999999987654
No 133
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=98.24 E-value=4.3e-08 Score=85.01 Aligned_cols=115 Identities=15% Similarity=0.080 Sum_probs=73.5
Q ss_pred CcceEEEecCcc-----------------cccc-hhhhhcCCC-------CCCceeeeccC----cccCC-----CCCeE
Q 043585 162 RLGSMVDVGGGN-----------------VLDL-PHAVANTPQ-------TENLKYVADDM----FQFIP-----PADAY 207 (287)
Q Consensus 162 ~~~~vlDvGgG~-----------------v~Dl-p~vi~~a~~-------~~Ri~~~~gd~----~~~~p-----~~D~~ 207 (287)
...+|||+|||. .+|+ |.+++.|++ .+|++++.+|+ +++++ .+|+|
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~i 144 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIYDFC 144 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTTTSTTCCSCCBSEE
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhhhhhcccCCcccEE
Confidence 467999999998 4665 666666653 45799999984 33444 49999
Q ss_pred EeccccccCCh-------------HHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCC------CCC------CCCCHHHH
Q 043585 208 FFMLFFHAFGG-------------EDSLKILKKCREAIAGNGQRGKVLIMDIVINEK------EDE------DQRTDKEW 262 (287)
Q Consensus 208 ~l~~vlh~~~d-------------~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~------~~~------~~rt~~e~ 262 (287)
++.-..|...+ +....+++.+++.|+| ||++.+++.+.... ... ...+.+++
T Consensus 145 ~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Lkp---gG~l~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~ 221 (254)
T 2h00_A 145 MCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAE---GGELEFVKRIIHDSLQLKKRLRWYSCMLGKKCSLAPL 221 (254)
T ss_dssp EECCCCC-------------------------CTTTTHHH---HTHHHHHHHHHHHHHHHGGGBSCEEEEESSTTSHHHH
T ss_pred EECCCCccCcchhcccccccccccCCHHHHhhhHHHHEec---CCEEEEEHHHHHHHHhcccceEEEEECCCChhHHHHH
Confidence 99866664431 1123567778888888 78777765443211 000 33456899
Q ss_pred HHHHHhCCCcEEEEEec
Q 043585 263 KTLFLDAGFTCCKITTM 279 (287)
Q Consensus 263 ~~ll~~aGf~~~~~~~~ 279 (287)
.++++++||+.+++...
T Consensus 222 ~~~l~~~Gf~~v~~~~~ 238 (254)
T 2h00_A 222 KEELRIQGVPKVTYTEF 238 (254)
T ss_dssp HHHHHHTTCSEEEEEEE
T ss_pred HHHHHHcCCCceEEEEE
Confidence 99999999998887766
No 134
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=98.24 E-value=1.1e-06 Score=78.38 Aligned_cols=80 Identities=13% Similarity=0.209 Sum_probs=63.5
Q ss_pred cccCcceEEEecCcc-----------------cccc-hhhhhcCCC------CCCceeeeccCcc-cCCCCCeEEecccc
Q 043585 159 LIERLGSMVDVGGGN-----------------VLDL-PHAVANTPQ------TENLKYVADDMFQ-FIPPADAYFFMLFF 213 (287)
Q Consensus 159 ~~~~~~~vlDvGgG~-----------------v~Dl-p~vi~~a~~------~~Ri~~~~gd~~~-~~p~~D~~~l~~vl 213 (287)
......+|||||||. .+|. |++++.|++ .+||+++.+|+.+ +...||+|++....
T Consensus 119 ~l~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l~d~~FDvV~~~a~~ 198 (298)
T 3fpf_A 119 RFRRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETVIDGLEFDVLMVAALA 198 (298)
T ss_dssp TCCTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGGGGGCCCSEEEECTTC
T ss_pred CCCCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhhCCCCCcCEEEECCCc
Confidence 456788999999996 5666 777877764 3799999999988 43359999986552
Q ss_pred ccCChHHHHHHHHHHHHHhcCCCCCcEEEEEee
Q 043585 214 HAFGGEDSLKILKKCREAIAGNGQRGKVLIMDI 246 (287)
Q Consensus 214 h~~~d~~~~~iL~~~~~al~~~~~~g~lli~e~ 246 (287)
++-.++++++++.|+| ||+|++.+.
T Consensus 199 -----~d~~~~l~el~r~LkP---GG~Lvv~~~ 223 (298)
T 3fpf_A 199 -----EPKRRVFRNIHRYVDT---ETRIIYRTY 223 (298)
T ss_dssp -----SCHHHHHHHHHHHCCT---TCEEEEEEC
T ss_pred -----cCHHHHHHHHHHHcCC---CcEEEEEcC
Confidence 3446899999999999 999999773
No 135
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=98.24 E-value=2.3e-06 Score=72.06 Aligned_cols=104 Identities=13% Similarity=0.085 Sum_probs=73.8
Q ss_pred CcceEEEecCcc-----------------cccc-hhhhhcCCC------CCCceeeeccCcc-c--CC--CCCeEEeccc
Q 043585 162 RLGSMVDVGGGN-----------------VLDL-PHAVANTPQ------TENLKYVADDMFQ-F--IP--PADAYFFMLF 212 (287)
Q Consensus 162 ~~~~vlDvGgG~-----------------v~Dl-p~vi~~a~~------~~Ri~~~~gd~~~-~--~p--~~D~~~l~~v 212 (287)
...+|||||||. .+|. |.+++.+++ .++++++.+|+.+ + ++ .+|+|++...
T Consensus 41 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~D~i~~~~~ 120 (214)
T 1yzh_A 41 DNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTDYFEDGEIDRLYLNFS 120 (214)
T ss_dssp CCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGGTSCTTCCSEEEEESC
T ss_pred CCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCCCCCCEEEEECC
Confidence 467899999999 4665 666666653 3689999999987 3 44 3999998754
Q ss_pred cccCChH-------HHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCCCCCCCHHHHHHHHHhCCCcEEEEE
Q 043585 213 FHAFGGE-------DSLKILKKCREAIAGNGQRGKVLIMDIVINEKEDEDQRTDKEWKTLFLDAGFTCCKIT 277 (287)
Q Consensus 213 lh~~~d~-------~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~~~rt~~e~~~ll~~aGf~~~~~~ 277 (287)
.+ |... ....+|+++++.|+| ||.+++..... ...++..++++++||+.+.+.
T Consensus 121 ~~-~~~~~~~~~~~~~~~~l~~~~~~Lkp---gG~l~~~~~~~--------~~~~~~~~~~~~~g~~~~~~~ 180 (214)
T 1yzh_A 121 DP-WPKKRHEKRRLTYKTFLDTFKRILPE---NGEIHFKTDNR--------GLFEYSLVSFSQYGMKLNGVW 180 (214)
T ss_dssp CC-CCSGGGGGGSTTSHHHHHHHHHHSCT---TCEEEEEESCH--------HHHHHHHHHHHHHTCEEEEEE
T ss_pred CC-ccccchhhhccCCHHHHHHHHHHcCC---CcEEEEEeCCH--------HHHHHHHHHHHHCCCeeeecc
Confidence 32 2221 124799999999999 99988753111 123566788899999988776
No 136
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=98.22 E-value=2.2e-06 Score=75.60 Aligned_cols=104 Identities=13% Similarity=0.096 Sum_probs=77.8
Q ss_pred cCcceEEEecCcc----------------cccc-hhhhhcCCC-------CCCceeeeccCcccC-C-CCCeEEeccccc
Q 043585 161 ERLGSMVDVGGGN----------------VLDL-PHAVANTPQ-------TENLKYVADDMFQFI-P-PADAYFFMLFFH 214 (287)
Q Consensus 161 ~~~~~vlDvGgG~----------------v~Dl-p~vi~~a~~-------~~Ri~~~~gd~~~~~-p-~~D~~~l~~vlh 214 (287)
.+..+|||+|||. .+|. |..++.+++ .++++++.+|+++.. + .+|+|++...
T Consensus 124 ~~~~~VLDlgcG~G~~~~~la~~~~~~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~~~~fD~Vi~~~p-- 201 (278)
T 2frn_A 124 KPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPGENIADRILMGYV-- 201 (278)
T ss_dssp CTTCEEEETTCTTTTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCCCSCEEEEEECCC--
T ss_pred CCCCEEEEecccCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcccCCccEEEECCc--
Confidence 4578999999999 4665 666666553 467999999999843 3 4999988433
Q ss_pred cCChHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCCCCCCCHHHHHHHHHhCCCcEEE
Q 043585 215 AFGGEDSLKILKKCREAIAGNGQRGKVLIMDIVINEKEDEDQRTDKEWKTLFLDAGFTCCK 275 (287)
Q Consensus 215 ~~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~~~rt~~e~~~ll~~aGf~~~~ 275 (287)
.....+++.+.+.|+| ||.+++.+....... .....+++.+.++++||+...
T Consensus 202 ----~~~~~~l~~~~~~Lkp---gG~l~~~~~~~~~~~--~~~~~~~i~~~~~~~G~~~~~ 253 (278)
T 2frn_A 202 ----VRTHEFIPKALSIAKD---GAIIHYHNTVPEKLM--PREPFETFKRITKEYGYDVEK 253 (278)
T ss_dssp ----SSGGGGHHHHHHHEEE---EEEEEEEEEEEGGGT--TTTTHHHHHHHHHHTTCEEEE
T ss_pred ----hhHHHHHHHHHHHCCC---CeEEEEEEeeccccc--cccHHHHHHHHHHHcCCeeEE
Confidence 1225789999999999 999999887642111 345678999999999998766
No 137
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=98.20 E-value=3e-06 Score=73.08 Aligned_cols=114 Identities=11% Similarity=0.087 Sum_probs=72.9
Q ss_pred cccCcceEEEecCcc------------------cccc-hhh----hhcCCCCCCceeeeccCcccC-----C-CCCeEEe
Q 043585 159 LIERLGSMVDVGGGN------------------VLDL-PHA----VANTPQTENLKYVADDMFQFI-----P-PADAYFF 209 (287)
Q Consensus 159 ~~~~~~~vlDvGgG~------------------v~Dl-p~v----i~~a~~~~Ri~~~~gd~~~~~-----p-~~D~~~l 209 (287)
.+....+|||+|||+ .+|. |.. ++.+++..+|.++.+|...+. + .+|+|++
T Consensus 73 ~l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r~nv~~i~~Da~~~~~~~~~~~~~D~I~~ 152 (232)
T 3id6_C 73 PIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRRPNIFPLLADARFPQSYKSVVENVDVLYV 152 (232)
T ss_dssp SCCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHCTTEEEEECCTTCGGGTTTTCCCEEEEEE
T ss_pred CCCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhcCCeEEEEcccccchhhhccccceEEEEe
Confidence 466788999999998 4555 333 333444578999999987631 2 4899876
Q ss_pred ccccccCChHHHHHHHHHHHHHhcCCCCCcEEEEEeeccC--CCCCCCCCCHHHHHHHHHhCCCcEEEEEecC
Q 043585 210 MLFFHAFGGEDSLKILKKCREAIAGNGQRGKVLIMDIVIN--EKEDEDQRTDKEWKTLFLDAGFTCCKITTMF 280 (287)
Q Consensus 210 ~~vlh~~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~--~~~~~~~rt~~e~~~ll~~aGf~~~~~~~~~ 280 (287)
.-.. .++...+++.+++.|+| ||++++.-...+ ....+. -..++-.+.|+++||++.++..+.
T Consensus 153 d~a~----~~~~~il~~~~~~~Lkp---GG~lvisik~~~~d~t~~~~-e~~~~~~~~L~~~gf~~~~~~~l~ 217 (232)
T 3id6_C 153 DIAQ----PDQTDIAIYNAKFFLKV---NGDMLLVIKARSIDVTKDPK-EIYKTEVEKLENSNFETIQIINLD 217 (232)
T ss_dssp CCCC----TTHHHHHHHHHHHHEEE---EEEEEEEEC-------CCSS-SSTTHHHHHHHHTTEEEEEEEECT
T ss_pred cCCC----hhHHHHHHHHHHHhCCC---CeEEEEEEccCCcccCCCHH-HHHHHHHHHHHHCCCEEEEEeccC
Confidence 5332 22333455666679999 999998732211 111112 223455567788999999998874
No 138
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=98.19 E-value=6e-06 Score=70.04 Aligned_cols=111 Identities=13% Similarity=0.138 Sum_probs=73.4
Q ss_pred ccCcceEEEecCcc------------------cccc-hhhhhc----CCCCCCceeeeccCccc-----CC-CCCeEEec
Q 043585 160 IERLGSMVDVGGGN------------------VLDL-PHAVAN----TPQTENLKYVADDMFQF-----IP-PADAYFFM 210 (287)
Q Consensus 160 ~~~~~~vlDvGgG~------------------v~Dl-p~vi~~----a~~~~Ri~~~~gd~~~~-----~p-~~D~~~l~ 210 (287)
.....+|||+|||. .+|. |.+++. ++..++++++.+|+.++ .+ .+|+|++.
T Consensus 71 ~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~D~v~~~ 150 (227)
T 1g8a_A 71 IKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEEYRALVPKVDVIFED 150 (227)
T ss_dssp CCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGGGGTTTCCCEEEEEEC
T ss_pred CCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhccCCCEEEEccCCCcchhhcccCCceEEEEC
Confidence 45677999999999 2343 333322 33357899999999872 23 48999864
Q ss_pred cccccCChHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCC-C-CCC-CCCCHHHHHHHHHhCCCcEEEEEecC
Q 043585 211 LFFHAFGGEDSLKILKKCREAIAGNGQRGKVLIMDIVINE-K-EDE-DQRTDKEWKTLFLDAGFTCCKITTMF 280 (287)
Q Consensus 211 ~vlh~~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~-~-~~~-~~rt~~e~~~ll~~aGf~~~~~~~~~ 280 (287)
.. ..+....+++++++.|+| ||++++. ..... . ..+ ...+.+++.++ +++ |++++.....
T Consensus 151 ~~----~~~~~~~~l~~~~~~Lkp---gG~l~~~-~~~~~~~~~~~~~~~~~~~l~~l-~~~-f~~~~~~~~~ 213 (227)
T 1g8a_A 151 VA----QPTQAKILIDNAEVYLKR---GGYGMIA-VKSRSIDVTKEPEQVFREVEREL-SEY-FEVIERLNLE 213 (227)
T ss_dssp CC----STTHHHHHHHHHHHHEEE---EEEEEEE-EEGGGTCTTSCHHHHHHHHHHHH-HTT-SEEEEEEECT
T ss_pred CC----CHhHHHHHHHHHHHhcCC---CCEEEEE-EecCCCCCCCChhhhhHHHHHHH-Hhh-ceeeeEeccC
Confidence 33 233344569999999999 9999987 22211 1 111 22345677777 778 9999888764
No 139
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=98.18 E-value=2.2e-06 Score=76.36 Aligned_cols=115 Identities=11% Similarity=0.137 Sum_probs=75.8
Q ss_pred CcceEEEecCcc----------------cccc-hhhhhc-CCCCCCceeee-ccCcc----cCC--CCCeEEeccccccC
Q 043585 162 RLGSMVDVGGGN----------------VLDL-PHAVAN-TPQTENLKYVA-DDMFQ----FIP--PADAYFFMLFFHAF 216 (287)
Q Consensus 162 ~~~~vlDvGgG~----------------v~Dl-p~vi~~-a~~~~Ri~~~~-gd~~~----~~p--~~D~~~l~~vlh~~ 216 (287)
...++||||||+ .+|. +.+++. ++..+|+.... .|+.. .+| .+|++++...+|..
T Consensus 85 ~g~~vLDiGcGTG~~t~~L~~~ga~~V~aVDvs~~mL~~a~r~~~rv~~~~~~ni~~l~~~~l~~~~fD~v~~d~sf~sl 164 (291)
T 3hp7_A 85 EDMITIDIGASTGGFTDVMLQNGAKLVYAVDVGTNQLVWKLRQDDRVRSMEQYNFRYAEPVDFTEGLPSFASIDVSFISL 164 (291)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSSSCSCHHHHTCTTEEEECSCCGGGCCGGGCTTCCCSEEEECCSSSCG
T ss_pred cccEEEecCCCccHHHHHHHhCCCCEEEEEECCHHHHHHHHHhCcccceecccCceecchhhCCCCCCCEEEEEeeHhhH
Confidence 457999999999 3555 444444 22345654433 24322 134 38999988888865
Q ss_pred ChHHHHHHHHHHHHHhcCCCCCcEEEEE---eeccCCCC----CC------CCCCHHHHHHHHHhCCCcEEEEEec--CC
Q 043585 217 GGEDSLKILKKCREAIAGNGQRGKVLIM---DIVINEKE----DE------DQRTDKEWKTLFLDAGFTCCKITTM--FG 281 (287)
Q Consensus 217 ~d~~~~~iL~~~~~al~~~~~~g~lli~---e~~~~~~~----~~------~~rt~~e~~~ll~~aGf~~~~~~~~--~~ 281 (287)
..+|+.+++.|+| ||+++++ ++-..... .. ..++.+++.++++++||++..+..- .|
T Consensus 165 -----~~vL~e~~rvLkp---GG~lv~lvkPqfe~~~~~~~~~G~vrd~~~~~~~~~~v~~~~~~~Gf~v~~~~~spi~g 236 (291)
T 3hp7_A 165 -----NLILPALAKILVD---GGQVVALVKPQFEAGREQIGKNGIVRESSIHEKVLETVTAFAVDYGFSVKGLDFSPIQG 236 (291)
T ss_dssp -----GGTHHHHHHHSCT---TCEEEEEECGGGTSCGGGCC-CCCCCCHHHHHHHHHHHHHHHHHTTEEEEEEEECSSCC
T ss_pred -----HHHHHHHHHHcCc---CCEEEEEECcccccChhhcCCCCccCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCC
Confidence 4699999999999 9999987 22221110 00 3347889999999999998877654 35
Q ss_pred ccc
Q 043585 282 LKS 284 (287)
Q Consensus 282 ~~s 284 (287)
..+
T Consensus 237 ~~g 239 (291)
T 3hp7_A 237 GHG 239 (291)
T ss_dssp GGG
T ss_pred CCc
Confidence 443
No 140
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=98.16 E-value=2.6e-06 Score=72.10 Aligned_cols=109 Identities=11% Similarity=0.075 Sum_probs=71.8
Q ss_pred ccCcceEEEecCcc-----------------cccc-hh----hhhcCCCCCCceeeeccCccc-----CC-CCCeEEecc
Q 043585 160 IERLGSMVDVGGGN-----------------VLDL-PH----AVANTPQTENLKYVADDMFQF-----IP-PADAYFFML 211 (287)
Q Consensus 160 ~~~~~~vlDvGgG~-----------------v~Dl-p~----vi~~a~~~~Ri~~~~gd~~~~-----~p-~~D~~~l~~ 211 (287)
..+..+|||||||+ .+|. |. +++.++...++.++.+|+..+ ++ .+|+|++.
T Consensus 55 ~~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~~- 133 (210)
T 1nt2_A 55 LRGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPWKYSGIVEKVDLIYQD- 133 (210)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCGGGTTTTCCCEEEEEEC-
T ss_pred CCCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcCCCeEEEEcCCCCchhhcccccceeEEEEe-
Confidence 45677999999999 4555 33 233343356788998988763 23 49999876
Q ss_pred ccccCChHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCCCCCCCHHHHH--H--HHHhCCCcEEEEEec
Q 043585 212 FFHAFGGEDSLKILKKCREAIAGNGQRGKVLIMDIVINEKEDEDQRTDKEWK--T--LFLDAGFTCCKITTM 279 (287)
Q Consensus 212 vlh~~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~~~rt~~e~~--~--ll~~aGf~~~~~~~~ 279 (287)
+.+ .++...+|+++++.|+| ||++++.-...+.+ ...+.++.. + .++++ |++.+....
T Consensus 134 ~~~---~~~~~~~l~~~~r~Lkp---gG~l~i~~~~~~~~---~~~~~~~~~~~~~~~l~~~-f~~~~~~~~ 195 (210)
T 1nt2_A 134 IAQ---KNQIEILKANAEFFLKE---KGEVVIMVKARSID---STAEPEEVFKSVLKEMEGD-FKIVKHGSL 195 (210)
T ss_dssp CCS---TTHHHHHHHHHHHHEEE---EEEEEEEEEHHHHC---TTSCHHHHHHHHHHHHHTT-SEEEEEEEC
T ss_pred ccC---hhHHHHHHHHHHHHhCC---CCEEEEEEecCCcc---ccCCHHHHHHHHHHHHHhh-cEEeeeecC
Confidence 332 23445669999999999 99999873221110 122344432 2 38888 999998877
No 141
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=98.16 E-value=1.8e-07 Score=86.64 Aligned_cols=109 Identities=11% Similarity=0.039 Sum_probs=77.8
Q ss_pred CcceEEEecCcc---------------cccc-hhhhhcCCC-----CCCceeeeccCccc-CC--CCCeEEecccccc--
Q 043585 162 RLGSMVDVGGGN---------------VLDL-PHAVANTPQ-----TENLKYVADDMFQF-IP--PADAYFFMLFFHA-- 215 (287)
Q Consensus 162 ~~~~vlDvGgG~---------------v~Dl-p~vi~~a~~-----~~Ri~~~~gd~~~~-~p--~~D~~~l~~vlh~-- 215 (287)
...+|||+|||. .+|. +.+++.+++ .-+++++.+|+.+. .+ .||+|++.-.+|.
T Consensus 233 ~~~~VLDlGcG~G~~~~~la~~g~~V~gvDis~~al~~A~~n~~~~~~~v~~~~~D~~~~~~~~~~fD~Ii~npp~~~~~ 312 (381)
T 3dmg_A 233 RGRQVLDLGAGYGALTLPLARMGAEVVGVEDDLASVLSLQKGLEANALKAQALHSDVDEALTEEARFDIIVTNPPFHVGG 312 (381)
T ss_dssp TTCEEEEETCTTSTTHHHHHHTTCEEEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTSCTTCCEEEEEECCCCCTTC
T ss_pred CCCEEEEEeeeCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHcCCCeEEEEcchhhccccCCCeEEEEECCchhhcc
Confidence 567999999999 5665 666666653 33589999999983 43 4999999999987
Q ss_pred -CChHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCCCCCCCHHHHHHHH------HhCCCcEEEEEecC
Q 043585 216 -FGGEDSLKILKKCREAIAGNGQRGKVLIMDIVINEKEDEDQRTDKEWKTLF------LDAGFTCCKITTMF 280 (287)
Q Consensus 216 -~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~~~rt~~e~~~ll------~~aGf~~~~~~~~~ 280 (287)
...++...+++++++.|+| ||+++|+..... .-...+.+.+ ++.||++.+.....
T Consensus 313 ~~~~~~~~~~l~~~~~~Lkp---GG~l~iv~n~~l-------~~~~~l~~~f~~v~~l~~~gF~Vl~a~~~~ 374 (381)
T 3dmg_A 313 AVILDVAQAFVNVAAARLRP---GGVFFLVSNPFL-------KYEPLLEEKFGAFQTLKVAEYKVLFAEKRG 374 (381)
T ss_dssp SSCCHHHHHHHHHHHHHEEE---EEEEEEEECTTS-------CHHHHHHHHHSCCEEEEESSSEEEEEECC-
T ss_pred cccHHHHHHHHHHHHHhcCc---CcEEEEEEcCCC-------ChHHHHHHhhccEEEEeCCCEEEEEEEEec
Confidence 4566778999999999999 999998632211 1122223333 56688888776554
No 142
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=98.16 E-value=4.3e-06 Score=71.88 Aligned_cols=102 Identities=8% Similarity=0.068 Sum_probs=77.5
Q ss_pred ccCcceEEEecCcc-----------------cccc-hhhhhcCCC-------CCCceeeeccCcccCC---CCCeEEecc
Q 043585 160 IERLGSMVDVGGGN-----------------VLDL-PHAVANTPQ-------TENLKYVADDMFQFIP---PADAYFFML 211 (287)
Q Consensus 160 ~~~~~~vlDvGgG~-----------------v~Dl-p~vi~~a~~-------~~Ri~~~~gd~~~~~p---~~D~~~l~~ 211 (287)
..+..+|+|||||+ ..|. |..++.|++ .+||++..+|.++..+ .+|+|++..
T Consensus 19 v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~~~~~~D~IviaG 98 (230)
T 3lec_A 19 VPKGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFEEADNIDTITICG 98 (230)
T ss_dssp SCTTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEE
T ss_pred CCCCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhccccccccCEEEEeC
Confidence 34568999999999 4555 556666653 6799999999999543 499999876
Q ss_pred ccccCChHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCCCCCCCHHHHHHHHHhCCCcEEEEEe
Q 043585 212 FFHAFGGEDSLKILKKCREAIAGNGQRGKVLIMDIVINEKEDEDQRTDKEWKTLFLDAGFTCCKITT 278 (287)
Q Consensus 212 vlh~~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~~~rt~~e~~~ll~~aGf~~~~~~~ 278 (287)
+.- +-...||....+.|++ +|++++.- .. ..++.++||.+.||.+.+..-
T Consensus 99 mGg----~lI~~IL~~~~~~l~~---~~~lIlqp-~~---------~~~~lr~~L~~~Gf~i~~E~l 148 (230)
T 3lec_A 99 MGG----RLIADILNNDIDKLQH---VKTLVLQP-NN---------REDDLRKWLAANDFEIVAEDI 148 (230)
T ss_dssp ECH----HHHHHHHHHTGGGGTT---CCEEEEEE-SS---------CHHHHHHHHHHTTEEEEEEEE
T ss_pred Cch----HHHHHHHHHHHHHhCc---CCEEEEEC-CC---------ChHHHHHHHHHCCCEEEEEEE
Confidence 652 4567899999889998 78777653 21 278999999999999876553
No 143
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=98.15 E-value=4.3e-06 Score=73.84 Aligned_cols=111 Identities=11% Similarity=0.083 Sum_probs=74.4
Q ss_pred cCcceEEEecCcc----------------cccc--hhhhhcCCC------------C----CCceeeeccCcc---cC--
Q 043585 161 ERLGSMVDVGGGN----------------VLDL--PHAVANTPQ------------T----ENLKYVADDMFQ---FI-- 201 (287)
Q Consensus 161 ~~~~~vlDvGgG~----------------v~Dl--p~vi~~a~~------------~----~Ri~~~~gd~~~---~~-- 201 (287)
....+|||||||. .+|. |.+++.+++ . +++++...|..+ .+
T Consensus 78 ~~~~~vLDlG~G~G~~~~~~a~~~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 157 (281)
T 3bzb_A 78 IAGKTVCELGAGAGLVSIVAFLAGADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSLQR 157 (281)
T ss_dssp TTTCEEEETTCTTSHHHHHHHHTTCSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHHHH
T ss_pred cCCCeEEEecccccHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHHHh
Confidence 4567999999999 6787 566655432 1 478888555332 12
Q ss_pred ----CCCCeEEeccccccCChHHHHHHHHHHHHHhc---CCCCCcEEEEE-eeccCCCCCCCCCCHHHHHHHHHhCC-Cc
Q 043585 202 ----PPADAYFFMLFFHAFGGEDSLKILKKCREAIA---GNGQRGKVLIM-DIVINEKEDEDQRTDKEWKTLFLDAG-FT 272 (287)
Q Consensus 202 ----p~~D~~~l~~vlh~~~d~~~~~iL~~~~~al~---~~~~~g~lli~-e~~~~~~~~~~~rt~~e~~~ll~~aG-f~ 272 (287)
..||+|+++.++|+.++ ...+++.+++.|+ | ++||+++++ ....+. ...+..++.+.++++| |+
T Consensus 158 ~~~~~~fD~Ii~~dvl~~~~~--~~~ll~~l~~~Lk~~~p-~~gG~l~v~~~~~~~~----~~~~~~~~~~~l~~~G~f~ 230 (281)
T 3bzb_A 158 CTGLQRFQVVLLADLLSFHQA--HDALLRSVKMLLALPAN-DPTAVALVTFTHHRPH----LAERDLAFFRLVNADGALI 230 (281)
T ss_dssp HHSCSSBSEEEEESCCSCGGG--HHHHHHHHHHHBCCTTT-CTTCEEEEEECC------------CTHHHHHHHHSTTEE
T ss_pred hccCCCCCEEEEeCcccChHH--HHHHHHHHHHHhcccCC-CCCCEEEEEEEeeecc----cchhHHHHHHHHHhcCCEE
Confidence 25999999999998654 5689999999999 6 337887664 221111 1122457778899999 99
Q ss_pred EEEEEe
Q 043585 273 CCKITT 278 (287)
Q Consensus 273 ~~~~~~ 278 (287)
+.++..
T Consensus 231 v~~~~~ 236 (281)
T 3bzb_A 231 AEPWLS 236 (281)
T ss_dssp EEEEEC
T ss_pred EEEecc
Confidence 988753
No 144
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.15 E-value=8e-07 Score=77.26 Aligned_cols=113 Identities=13% Similarity=0.135 Sum_probs=79.7
Q ss_pred CcceEEEecCcc---------------cccc-hhhhhcCCCCCCceeeeccCcc-cCC--CCCeEEeccccccCChHHHH
Q 043585 162 RLGSMVDVGGGN---------------VLDL-PHAVANTPQTENLKYVADDMFQ-FIP--PADAYFFMLFFHAFGGEDSL 222 (287)
Q Consensus 162 ~~~~vlDvGgG~---------------v~Dl-p~vi~~a~~~~Ri~~~~gd~~~-~~p--~~D~~~l~~vlh~~~d~~~~ 222 (287)
...+|||||||. .+|. |.+++.+++...-.++.+|+.+ +++ .+|+|++..+++++.++ ..
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~~~-~~ 132 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQERGFEVVLVDPSKEMLEVAREKGVKNVVEAKAEDLPFPSGAFEAVLALGDVLSYVEN-KD 132 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHTTTCEEEEEESCHHHHHHHHHHTCSCEEECCTTSCCSCTTCEEEEEECSSHHHHCSC-HH
T ss_pred CCCeEEEeCCCcCHHHHHHHHcCCeEEEEeCCHHHHHHHHhhcCCCEEECcHHHCCCCCCCEEEEEEcchhhhcccc-HH
Confidence 668999999998 5665 6666666541111388889887 554 49999998876666433 67
Q ss_pred HHHHHHHHHhcCCCCCcEEEEEeeccC--------CCC----------------C-C-----CCCCHHHHHHHHHhCCCc
Q 043585 223 KILKKCREAIAGNGQRGKVLIMDIVIN--------EKE----------------D-E-----DQRTDKEWKTLFLDAGFT 272 (287)
Q Consensus 223 ~iL~~~~~al~~~~~~g~lli~e~~~~--------~~~----------------~-~-----~~rt~~e~~~ll~~aGf~ 272 (287)
.+|+++++.|+| ||++++...... ... . . ..++.+++.++ +||+
T Consensus 133 ~~l~~~~~~Lkp---gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l---aGf~ 206 (260)
T 2avn_A 133 KAFSEIRRVLVP---DGLLIATVDNFYTFLQQMIEKDAWDQITRFLKTQTTSVGTTLFSFNSYAFKPEDLDSL---EGFE 206 (260)
T ss_dssp HHHHHHHHHEEE---EEEEEEEEEBHHHHHHHHHHTTCHHHHHHHHHHCEEEEECSSEEEEEECBCGGGGSSC---TTEE
T ss_pred HHHHHHHHHcCC---CeEEEEEeCChHHHHHHhhcchhHHHHHHHHhccccccCCCceeEEEeccCHHHHHHh---cCce
Confidence 899999999999 999988654321 000 0 0 14577888777 9999
Q ss_pred EEEEEecCC
Q 043585 273 CCKITTMFG 281 (287)
Q Consensus 273 ~~~~~~~~~ 281 (287)
++++....+
T Consensus 207 ~~~~~~~~~ 215 (260)
T 2avn_A 207 TVDIRGIGV 215 (260)
T ss_dssp EEEEEEECS
T ss_pred EEEEECCCC
Confidence 998887654
No 145
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=98.15 E-value=6e-07 Score=81.89 Aligned_cols=81 Identities=12% Similarity=0.140 Sum_probs=65.0
Q ss_pred ccCcceEEEecCcc----------------cccchhhhhcCCC-------CCCceeeeccCcc-cCC-CCCeEEeccccc
Q 043585 160 IERLGSMVDVGGGN----------------VLDLPHAVANTPQ-------TENLKYVADDMFQ-FIP-PADAYFFMLFFH 214 (287)
Q Consensus 160 ~~~~~~vlDvGgG~----------------v~Dlp~vi~~a~~-------~~Ri~~~~gd~~~-~~p-~~D~~~l~~vlh 214 (287)
..+..+|||||||. .+|..++++.+++ .++|+++.+|+.+ +.| .+|+|+...++|
T Consensus 48 ~~~~~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~~~~D~Ivs~~~~~ 127 (348)
T 2y1w_A 48 DFKDKIVLDVGCGSGILSFFAAQAGARKIYAVEASTMAQHAEVLVKSNNLTDRIVVIPGKVEEVSLPEQVDIIISEPMGY 127 (348)
T ss_dssp GTTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECSTHHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSCEEEEEECCCBT
T ss_pred cCCcCEEEEcCCCccHHHHHHHhCCCCEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcchhhCCCCCceeEEEEeCchh
Confidence 34567999999999 4555445444432 3789999999988 555 499999999999
Q ss_pred cCChHHHHHHHHHHHHHhcCCCCCcEEEE
Q 043585 215 AFGGEDSLKILKKCREAIAGNGQRGKVLI 243 (287)
Q Consensus 215 ~~~d~~~~~iL~~~~~al~~~~~~g~lli 243 (287)
.+..++....++++++.|+| ||.+++
T Consensus 128 ~~~~~~~~~~l~~~~~~Lkp---gG~li~ 153 (348)
T 2y1w_A 128 MLFNERMLESYLHAKKYLKP---SGNMFP 153 (348)
T ss_dssp TBTTTSHHHHHHHGGGGEEE---EEEEES
T ss_pred cCChHHHHHHHHHHHhhcCC---CeEEEE
Confidence 99888888899999999999 888874
No 146
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=98.10 E-value=1.2e-06 Score=77.05 Aligned_cols=103 Identities=17% Similarity=0.207 Sum_probs=77.1
Q ss_pred cccCcceEEEecCcc------------------cccc-hhhhhcCCC-------CCCceeeeccCcccCC--CCCeEEec
Q 043585 159 LIERLGSMVDVGGGN------------------VLDL-PHAVANTPQ-------TENLKYVADDMFQFIP--PADAYFFM 210 (287)
Q Consensus 159 ~~~~~~~vlDvGgG~------------------v~Dl-p~vi~~a~~-------~~Ri~~~~gd~~~~~p--~~D~~~l~ 210 (287)
+.....+|||+|||. .+|. |..++.+++ .+++++..+|+.+.++ .+|+|++
T Consensus 109 ~~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~V~~- 187 (277)
T 1o54_A 109 DVKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEGFDEKDVDALFL- 187 (277)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGCCSCCSEEEEEE-
T ss_pred CCCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHcccCCccCEEEE-
Confidence 456678999999998 3454 555555543 2689999999988655 4999987
Q ss_pred cccccCChHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCCCCCCCHHHHHHHHHhCCCcEEEEEec
Q 043585 211 LFFHAFGGEDSLKILKKCREAIAGNGQRGKVLIMDIVINEKEDEDQRTDKEWKTLFLDAGFTCCKITTM 279 (287)
Q Consensus 211 ~vlh~~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~~~rt~~e~~~ll~~aGf~~~~~~~~ 279 (287)
+.++. ..+|++++++|+| ||++++.+.... ...++.++|+++||...++...
T Consensus 188 ----~~~~~--~~~l~~~~~~L~p---gG~l~~~~~~~~--------~~~~~~~~l~~~gf~~~~~~~~ 239 (277)
T 1o54_A 188 ----DVPDP--WNYIDKCWEALKG---GGRFATVCPTTN--------QVQETLKKLQELPFIRIEVWES 239 (277)
T ss_dssp ----CCSCG--GGTHHHHHHHEEE---EEEEEEEESSHH--------HHHHHHHHHHHSSEEEEEEECC
T ss_pred ----CCcCH--HHHHHHHHHHcCC---CCEEEEEeCCHH--------HHHHHHHHHHHCCCceeEEEEE
Confidence 33333 4789999999999 999999874332 3567888899999998877654
No 147
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=98.10 E-value=1.1e-06 Score=73.41 Aligned_cols=96 Identities=21% Similarity=0.257 Sum_probs=69.0
Q ss_pred CcceEEEecCcc-----------------cccc-hhhhhcCCC------CCCceeeeccCcccCC--CCCeEEecccccc
Q 043585 162 RLGSMVDVGGGN-----------------VLDL-PHAVANTPQ------TENLKYVADDMFQFIP--PADAYFFMLFFHA 215 (287)
Q Consensus 162 ~~~~vlDvGgG~-----------------v~Dl-p~vi~~a~~------~~Ri~~~~gd~~~~~p--~~D~~~l~~vlh~ 215 (287)
...+|||||||. .+|. |..++.+++ .+++++..+|+.+..+ .+|+|++..+ ++
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~i~~~~~-~~ 143 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFPSEPPFDGVISRAF-AS 143 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTSCCCSCEEEEECSCS-SS
T ss_pred CCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhhCCccCCcCEEEEecc-CC
Confidence 357999999999 4554 555555542 2459999999988433 4999986543 22
Q ss_pred CChHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCCCCCCCHHHHHHHHHhCCCcEEEEE
Q 043585 216 FGGEDSLKILKKCREAIAGNGQRGKVLIMDIVINEKEDEDQRTDKEWKTLFLDAGFTCCKIT 277 (287)
Q Consensus 216 ~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~~~rt~~e~~~ll~~aGf~~~~~~ 277 (287)
...+++++++.|+| ||.+++... ....++..++++ ||+.+++.
T Consensus 144 -----~~~~l~~~~~~L~~---gG~l~~~~~---------~~~~~~~~~~~~--g~~~~~~~ 186 (207)
T 1jsx_A 144 -----LNDMVSWCHHLPGE---QGRFYALKG---------QMPEDEIALLPE--EYQVESVV 186 (207)
T ss_dssp -----HHHHHHHHTTSEEE---EEEEEEEES---------SCCHHHHHTSCT--TEEEEEEE
T ss_pred -----HHHHHHHHHHhcCC---CcEEEEEeC---------CCchHHHHHHhc--CCceeeee
Confidence 35899999999999 899888742 234667777765 99988754
No 148
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=98.08 E-value=1.2e-06 Score=79.74 Aligned_cols=84 Identities=18% Similarity=0.244 Sum_probs=65.7
Q ss_pred cCcceEEEecCcc-----------------cccc-hhhhhcCCC-----CCCceeeeccCcccCC-CCCeEEecccccc-
Q 043585 161 ERLGSMVDVGGGN-----------------VLDL-PHAVANTPQ-----TENLKYVADDMFQFIP-PADAYFFMLFFHA- 215 (287)
Q Consensus 161 ~~~~~vlDvGgG~-----------------v~Dl-p~vi~~a~~-----~~Ri~~~~gd~~~~~p-~~D~~~l~~vlh~- 215 (287)
....+|||+|||. .+|. +.+++.+++ ..+++++.+|+++..+ .+|+|++..++|.
T Consensus 195 ~~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~~d~~~~~~~~fD~Iv~~~~~~~g 274 (343)
T 2pjd_A 195 HTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEGEVFASNVFSEVKGRFDMIISNPPFHDG 274 (343)
T ss_dssp TCCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTCCSCEEEEEECCCCCSS
T ss_pred CCCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCEEEEccccccccCCeeEEEECCCcccC
Confidence 3456999999999 4565 555666553 3346788999987434 5999999999997
Q ss_pred --CChHHHHHHHHHHHHHhcCCCCCcEEEEEeec
Q 043585 216 --FGGEDSLKILKKCREAIAGNGQRGKVLIMDIV 247 (287)
Q Consensus 216 --~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~ 247 (287)
++.++..++|+++++.|+| ||+++++...
T Consensus 275 ~~~~~~~~~~~l~~~~~~Lkp---gG~l~i~~~~ 305 (343)
T 2pjd_A 275 MQTSLDAAQTLIRGAVRHLNS---GGELRIVANA 305 (343)
T ss_dssp SHHHHHHHHHHHHHHGGGEEE---EEEEEEEEET
T ss_pred ccCCHHHHHHHHHHHHHhCCC---CcEEEEEEcC
Confidence 4667788999999999999 9999997653
No 149
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=98.07 E-value=1e-06 Score=76.57 Aligned_cols=104 Identities=10% Similarity=-0.048 Sum_probs=74.7
Q ss_pred cCcceEEEecCcc-----------------cccc-hhhhhcCCC------CCCceeeeccCcc-cC-----CCCCeEEec
Q 043585 161 ERLGSMVDVGGGN-----------------VLDL-PHAVANTPQ------TENLKYVADDMFQ-FI-----PPADAYFFM 210 (287)
Q Consensus 161 ~~~~~vlDvGgG~-----------------v~Dl-p~vi~~a~~------~~Ri~~~~gd~~~-~~-----p~~D~~~l~ 210 (287)
....+|||||||+ .+|. +..++.+++ ..+|+++.+|+.+ +. ..||+|+.+
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~~~~~~~~~fD~I~s~ 158 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLAREAGHREAYARAVAR 158 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHTTSTTTTTCEEEEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEECcHHHhhcccccCCCceEEEEC
Confidence 4568999999999 4553 445555542 3469999999877 32 249999987
Q ss_pred cccccCChHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCCCCCCCHHHHHHHHHhCCCcEEEEEec
Q 043585 211 LFFHAFGGEDSLKILKKCREAIAGNGQRGKVLIMDIVINEKEDEDQRTDKEWKTLFLDAGFTCCKITTM 279 (287)
Q Consensus 211 ~vlh~~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~~~rt~~e~~~ll~~aGf~~~~~~~~ 279 (287)
.+- + ...+++.+++.|+| ||+++++.....+ -...++...++..||+..++.+.
T Consensus 159 a~~----~--~~~ll~~~~~~Lkp---gG~l~~~~g~~~~------~e~~~~~~~l~~~G~~~~~~~~~ 212 (249)
T 3g89_A 159 AVA----P--LCVLSELLLPFLEV---GGAAVAMKGPRVE------EELAPLPPALERLGGRLGEVLAL 212 (249)
T ss_dssp SSC----C--HHHHHHHHGGGEEE---EEEEEEEECSCCH------HHHTTHHHHHHHHTEEEEEEEEE
T ss_pred CcC----C--HHHHHHHHHHHcCC---CeEEEEEeCCCcH------HHHHHHHHHHHHcCCeEEEEEEe
Confidence 542 2 35789999999999 9999987643221 12456778888999999888765
No 150
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=98.07 E-value=3.1e-06 Score=73.11 Aligned_cols=116 Identities=9% Similarity=0.033 Sum_probs=76.1
Q ss_pred cCcceEEEecCcc--------------cccc-hhhhhcCCC-----CCCceeeeccCcc-cCCC-CCeEEeccccccCCh
Q 043585 161 ERLGSMVDVGGGN--------------VLDL-PHAVANTPQ-----TENLKYVADDMFQ-FIPP-ADAYFFMLFFHAFGG 218 (287)
Q Consensus 161 ~~~~~vlDvGgG~--------------v~Dl-p~vi~~a~~-----~~Ri~~~~gd~~~-~~p~-~D~~~l~~vlh~~~d 218 (287)
..+.+|||||||. .+|+ +..++.+++ ..+.++..+|... +.|+ +|++++.-++|...+
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~~~~~y~a~DId~~~i~~ar~~~~~~g~~~~~~v~D~~~~~~~~~~DvvLllk~lh~LE~ 183 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYERGIASVWGCDIHQGLGDVITPFAREKDWDFTFALQDVLCAPPAEAGDLALIFKLLPLLER 183 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHTTCSEEEEEESBHHHHHHHHHHHHHTTCEEEEEECCTTTSCCCCBCSEEEEESCHHHHHH
T ss_pred CCCCeEEEecCCccHHHHHhccCCeEEEEeCCHHHHHHHHHHHHhcCCCceEEEeecccCCCCCCcchHHHHHHHHHhhh
Confidence 5678999999999 5665 556666553 5778899999998 4554 999999999999988
Q ss_pred HHHHHHHHHHHHHhcCCCCCcEEEEEe--eccCCCCCCCCCCHHHHHHHHHhCCCcEEEEEecCC
Q 043585 219 EDSLKILKKCREAIAGNGQRGKVLIMD--IVINEKEDEDQRTDKEWKTLFLDAGFTCCKITTMFG 281 (287)
Q Consensus 219 ~~~~~iL~~~~~al~~~~~~g~lli~e--~~~~~~~~~~~rt~~e~~~ll~~aGf~~~~~~~~~~ 281 (287)
++-...+ ++.++|++ ++.++-++ .+-...+...+.-...|++.+ .+.+.+++...+++
T Consensus 184 q~~~~~~-~ll~aL~~---~~vvVsfPtksl~Gr~~gm~~~Y~~~~e~~~-~~~~~~~~~~~~~n 243 (253)
T 3frh_A 184 EQAGSAM-ALLQSLNT---PRMAVSFPTRSLGGRGKGMEANYAAWFEGGL-PAEFEIEDKKTIGT 243 (253)
T ss_dssp HSTTHHH-HHHHHCBC---SEEEEEEECC-----------CHHHHHHHHS-CTTEEEEEEEEETT
T ss_pred hchhhHH-HHHHHhcC---CCEEEEcChHHhcCCCcchhhHHHHHHHHHh-hccchhhhheecCc
Confidence 8877666 88899999 55555555 222222121222344555555 44566666555543
No 151
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=98.06 E-value=1.2e-05 Score=64.43 Aligned_cols=104 Identities=15% Similarity=0.163 Sum_probs=74.4
Q ss_pred ccCcceEEEecCcc------------------cccchhhhhcCCCCCCceeeeccCcc-c--------CC--CCCeEEec
Q 043585 160 IERLGSMVDVGGGN------------------VLDLPHAVANTPQTENLKYVADDMFQ-F--------IP--PADAYFFM 210 (287)
Q Consensus 160 ~~~~~~vlDvGgG~------------------v~Dlp~vi~~a~~~~Ri~~~~gd~~~-~--------~p--~~D~~~l~ 210 (287)
.....+|||+|||. .+|..+++ ...+++++.+|+.+ + ++ .+|+|++.
T Consensus 20 ~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~~~----~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~D~i~~~ 95 (180)
T 1ej0_A 20 FKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLPMD----PIVGVDFLQGDFRDELVMKALLERVGDSKVQVVMSD 95 (180)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSCCC----CCTTEEEEESCTTSHHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcccc----ccCcEEEEEcccccchhhhhhhccCCCCceeEEEEC
Confidence 35567999999998 22222211 23789999999987 4 55 49999999
Q ss_pred cccccCChHH---------HHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCCCCCCCHHHHHHHHHhCCCcEEEEEec
Q 043585 211 LFFHAFGGED---------SLKILKKCREAIAGNGQRGKVLIMDIVINEKEDEDQRTDKEWKTLFLDAGFTCCKITTM 279 (287)
Q Consensus 211 ~vlh~~~d~~---------~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~~~rt~~e~~~ll~~aGf~~~~~~~~ 279 (287)
.++|...+.. ...+|+++++.|+| ||++++.....+ +..++.+.+++. |+.+++...
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~---gG~l~~~~~~~~--------~~~~~~~~~~~~-~~~~~~~~~ 161 (180)
T 1ej0_A 96 MAPNMSGTPAVDIPRAMYLVELALEMCRDVLAP---GGSFVVKVFQGE--------GFDEYLREIRSL-FTKVKVRKP 161 (180)
T ss_dssp CCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEEEEESST--------THHHHHHHHHHH-EEEEEEECC
T ss_pred CCccccCCCccchHHHHHHHHHHHHHHHHHcCC---CcEEEEEEecCC--------cHHHHHHHHHHh-hhhEEeecC
Confidence 9888665431 15899999999999 999998765433 356777777775 877776543
No 152
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=98.05 E-value=9.4e-06 Score=68.58 Aligned_cols=104 Identities=14% Similarity=0.145 Sum_probs=70.7
Q ss_pred CcceEEEecCcc-----------------cccc-hhhhhcCCC------CCCceeeeccCcc-c--CC--CCCeEEeccc
Q 043585 162 RLGSMVDVGGGN-----------------VLDL-PHAVANTPQ------TENLKYVADDMFQ-F--IP--PADAYFFMLF 212 (287)
Q Consensus 162 ~~~~vlDvGgG~-----------------v~Dl-p~vi~~a~~------~~Ri~~~~gd~~~-~--~p--~~D~~~l~~v 212 (287)
...+|||||||. .+|. +.+++.|++ .++++++.+|+.+ + ++ .+|.|++...
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~l~~~~~~~~~d~v~~~~~ 117 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLTDVFEPGEVKRVYLNFS 117 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHHHHCCTTSCCEEEEESC
T ss_pred CCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCcCCcCEEEEECC
Confidence 457899999999 4665 556665542 4679999999887 3 44 3898876432
Q ss_pred cccCChHH-------HHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCCCCCCCHHHHHHHHHhCCCcEEEEE
Q 043585 213 FHAFGGED-------SLKILKKCREAIAGNGQRGKVLIMDIVINEKEDEDQRTDKEWKTLFLDAGFTCCKIT 277 (287)
Q Consensus 213 lh~~~d~~-------~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~~~rt~~e~~~ll~~aGf~~~~~~ 277 (287)
. .|.... ...+|+.+++.|+| ||.|++.... ....++..+.++++||+...+.
T Consensus 118 ~-p~~~~~~~~~rl~~~~~l~~~~~~Lkp---gG~l~~~td~--------~~~~~~~~~~~~~~g~~~~~~~ 177 (213)
T 2fca_A 118 D-PWPKKRHEKRRLTYSHFLKKYEEVMGK---GGSIHFKTDN--------RGLFEYSLKSFSEYGLLLTYVS 177 (213)
T ss_dssp C-CCCSGGGGGGSTTSHHHHHHHHHHHTT---SCEEEEEESC--------HHHHHHHHHHHHHHTCEEEEEE
T ss_pred C-CCcCccccccccCcHHHHHHHHHHcCC---CCEEEEEeCC--------HHHHHHHHHHHHHCCCcccccc
Confidence 2 122110 24789999999999 9999886311 1113455778888999877654
No 153
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=98.02 E-value=9.1e-06 Score=70.44 Aligned_cols=101 Identities=14% Similarity=0.163 Sum_probs=76.1
Q ss_pred ccCcceEEEecCcc-----------------cccc-hhhhhcCCC-------CCCceeeeccCcccCC---CCCeEEecc
Q 043585 160 IERLGSMVDVGGGN-----------------VLDL-PHAVANTPQ-------TENLKYVADDMFQFIP---PADAYFFML 211 (287)
Q Consensus 160 ~~~~~~vlDvGgG~-----------------v~Dl-p~vi~~a~~-------~~Ri~~~~gd~~~~~p---~~D~~~l~~ 211 (287)
..+..+|+|||||+ .+|. |..++.|++ .+||++..+|.++..+ .+|+|++..
T Consensus 19 v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~~~~~~D~Iviag 98 (244)
T 3gnl_A 19 ITKNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIEKKDAIDTIVIAG 98 (244)
T ss_dssp CCSSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEE
T ss_pred CCCCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccCccccccEEEEeC
Confidence 34568999999999 4555 555666553 5789999999999544 399999875
Q ss_pred ccccCChHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCCCCCCCHHHHHHHHHhCCCcEEEEE
Q 043585 212 FFHAFGGEDSLKILKKCREAIAGNGQRGKVLIMDIVINEKEDEDQRTDKEWKTLFLDAGFTCCKIT 277 (287)
Q Consensus 212 vlh~~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~~~rt~~e~~~ll~~aGf~~~~~~ 277 (287)
+. -+-...||....+.|++ ++++++.- .. .....++||.+.||.+.+..
T Consensus 99 mG----g~lI~~IL~~~~~~L~~---~~~lIlq~-~~---------~~~~lr~~L~~~Gf~i~~E~ 147 (244)
T 3gnl_A 99 MG----GTLIRTILEEGAAKLAG---VTKLILQP-NI---------AAWQLREWSEQNNWLITSEA 147 (244)
T ss_dssp EC----HHHHHHHHHHTGGGGTT---CCEEEEEE-SS---------CHHHHHHHHHHHTEEEEEEE
T ss_pred Cc----hHHHHHHHHHHHHHhCC---CCEEEEEc-CC---------ChHHHHHHHHHCCCEEEEEE
Confidence 54 35567899999999988 78877753 21 37789999999999985543
No 154
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=98.01 E-value=2.4e-06 Score=73.15 Aligned_cols=76 Identities=18% Similarity=0.209 Sum_probs=57.6
Q ss_pred cccCcceEEEecCcc----------------cccc-hhhhhcCCC------CCCceeeeccCcccCC---CCCeEEeccc
Q 043585 159 LIERLGSMVDVGGGN----------------VLDL-PHAVANTPQ------TENLKYVADDMFQFIP---PADAYFFMLF 212 (287)
Q Consensus 159 ~~~~~~~vlDvGgG~----------------v~Dl-p~vi~~a~~------~~Ri~~~~gd~~~~~p---~~D~~~l~~v 212 (287)
......+|||||||. .+|. |..++.+++ .+++++..+|+..+++ .||+|++..+
T Consensus 88 ~~~~~~~vLdiG~G~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~Ii~~~~ 167 (235)
T 1jg1_A 88 NLKPGMNILEVGTGSGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKGFPPKAPYDVIIVTAG 167 (235)
T ss_dssp TCCTTCCEEEECCTTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCEEEEEECSB
T ss_pred CCCCCCEEEEEeCCcCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCcccCCCCCCCccEEEECCc
Confidence 345677999999998 4553 566666543 3569999999855554 3899999999
Q ss_pred cccCChHHHHHHHHHHHHHhcCCCCCcEEEEEe
Q 043585 213 FHAFGGEDSLKILKKCREAIAGNGQRGKVLIMD 245 (287)
Q Consensus 213 lh~~~d~~~~~iL~~~~~al~~~~~~g~lli~e 245 (287)
+|.+.+ ++.+.|+| ||++++.-
T Consensus 168 ~~~~~~--------~~~~~L~p---gG~lvi~~ 189 (235)
T 1jg1_A 168 APKIPE--------PLIEQLKI---GGKLIIPV 189 (235)
T ss_dssp BSSCCH--------HHHHTEEE---EEEEEEEE
T ss_pred HHHHHH--------HHHHhcCC---CcEEEEEE
Confidence 998875 56788999 89888854
No 155
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=98.00 E-value=4.2e-06 Score=76.32 Aligned_cols=80 Identities=11% Similarity=0.106 Sum_probs=61.1
Q ss_pred ccCcceEEEecCcc----------------cccchhhhhcCCC-------CCCceeeeccCcc-cCC--CCCeEEecccc
Q 043585 160 IERLGSMVDVGGGN----------------VLDLPHAVANTPQ-------TENLKYVADDMFQ-FIP--PADAYFFMLFF 213 (287)
Q Consensus 160 ~~~~~~vlDvGgG~----------------v~Dlp~vi~~a~~-------~~Ri~~~~gd~~~-~~p--~~D~~~l~~vl 213 (287)
.....+|||||||. .+|..++++.|++ .+||+++.+|+.+ ++| .+|+|+...+.
T Consensus 64 ~~~~~~VLDvGcG~G~~~~~la~~g~~~v~gvD~s~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~Iis~~~~ 143 (349)
T 3q7e_A 64 LFKDKVVLDVGSGTGILCMFAAKAGARKVIGIECSSISDYAVKIVKANKLDHVVTIIKGKVEEVELPVEKVDIIISEWMG 143 (349)
T ss_dssp HHTTCEEEEESCTTSHHHHHHHHTTCSEEEEEECSTHHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSSCEEEEEECCCB
T ss_pred cCCCCEEEEEeccchHHHHHHHHCCCCEEEEECcHHHHHHHHHHHHHcCCCCcEEEEECcHHHccCCCCceEEEEEcccc
Confidence 34568999999999 5666556666543 5679999999998 666 49999987765
Q ss_pred ccC-ChHHHHHHHHHHHHHhcCCCCCcEEE
Q 043585 214 HAF-GGEDSLKILKKCREAIAGNGQRGKVL 242 (287)
Q Consensus 214 h~~-~d~~~~~iL~~~~~al~~~~~~g~ll 242 (287)
|.. ..+....+|+.+++.|+| ||.++
T Consensus 144 ~~l~~~~~~~~~l~~~~r~Lkp---gG~li 170 (349)
T 3q7e_A 144 YCLFYESMLNTVLHARDKWLAP---DGLIF 170 (349)
T ss_dssp BTBTBTCCHHHHHHHHHHHEEE---EEEEE
T ss_pred ccccCchhHHHHHHHHHHhCCC---CCEEc
Confidence 543 334456799999999999 88876
No 156
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=97.98 E-value=1.1e-06 Score=75.78 Aligned_cols=108 Identities=18% Similarity=0.131 Sum_probs=64.2
Q ss_pred CcceEEEecCcc----------------cccc-hhhhhcCCC-CCC--------ceeee-ccCcccCCCCCeEEeccccc
Q 043585 162 RLGSMVDVGGGN----------------VLDL-PHAVANTPQ-TEN--------LKYVA-DDMFQFIPPADAYFFMLFFH 214 (287)
Q Consensus 162 ~~~~vlDvGgG~----------------v~Dl-p~vi~~a~~-~~R--------i~~~~-gd~~~~~p~~D~~~l~~vlh 214 (287)
...+|||||||+ .+|+ |.+++.+++ ..| +.+.. .|+..+. +|.+.+--++.
T Consensus 37 ~g~~VLDiGcGtG~~t~~la~~g~~~V~gvDis~~ml~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~--~d~~~~D~v~~ 114 (232)
T 3opn_A 37 NGKTCLDIGSSTGGFTDVMLQNGAKLVYALDVGTNQLAWKIRSDERVVVMEQFNFRNAVLADFEQGR--PSFTSIDVSFI 114 (232)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSCCCCCHHHHTCTTEEEECSCCGGGCCGGGCCSCC--CSEEEECCSSS
T ss_pred CCCEEEEEccCCCHHHHHHHhcCCCEEEEEcCCHHHHHHHHHhCccccccccceEEEeCHhHcCcCC--CCEEEEEEEhh
Confidence 456999999999 3554 344444321 233 33333 3332221 23333333333
Q ss_pred cCChHHHHHHHHHHHHHhcCCCCCcEEEEEee-ccC-------CCCC--C---CCCCHHHHHHHHHhCCCcEEEEEec
Q 043585 215 AFGGEDSLKILKKCREAIAGNGQRGKVLIMDI-VIN-------EKED--E---DQRTDKEWKTLFLDAGFTCCKITTM 279 (287)
Q Consensus 215 ~~~d~~~~~iL~~~~~al~~~~~~g~lli~e~-~~~-------~~~~--~---~~rt~~e~~~ll~~aGf~~~~~~~~ 279 (287)
.+ .++|+++++.|+| ||++++.-. ... ..+. . ..++.+++.++++++||++..+...
T Consensus 115 ~l-----~~~l~~i~rvLkp---gG~lv~~~~p~~e~~~~~~~~~G~~~d~~~~~~~~~~l~~~l~~aGf~v~~~~~~ 184 (232)
T 3opn_A 115 SL-----DLILPPLYEILEK---NGEVAALIKPQFEAGREQVGKNGIIRDPKVHQMTIEKVLKTATQLGFSVKGLTFS 184 (232)
T ss_dssp CG-----GGTHHHHHHHSCT---TCEEEEEECHHHHSCHHHHC-CCCCCCHHHHHHHHHHHHHHHHHHTEEEEEEEEC
T ss_pred hH-----HHHHHHHHHhccC---CCEEEEEECcccccCHHHhCcCCeecCcchhHHHHHHHHHHHHHCCCEEEEEEEc
Confidence 33 4799999999999 999998620 010 0010 0 2347889999999999998877654
No 157
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=97.97 E-value=1e-05 Score=66.61 Aligned_cols=84 Identities=10% Similarity=-0.007 Sum_probs=64.7
Q ss_pred cCcceEEEecCcc----------------cccc-hhhhhcCCC------CCCceeeeccCccc---C-C-CCCeEEeccc
Q 043585 161 ERLGSMVDVGGGN----------------VLDL-PHAVANTPQ------TENLKYVADDMFQF---I-P-PADAYFFMLF 212 (287)
Q Consensus 161 ~~~~~vlDvGgG~----------------v~Dl-p~vi~~a~~------~~Ri~~~~gd~~~~---~-p-~~D~~~l~~v 212 (287)
....+|||+|||. .+|. |.+++.+++ .++++++.+|+.+. + + .+|+|++...
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~i~~~~p 122 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVVAAGTTSPVDLVLADPP 122 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTCSEEEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHHHHHHCCSSCCSEEEECCC
T ss_pred CCCCEEEEeCCCcCHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEEccHHHHHhhccCCCccEEEECCC
Confidence 4567999999999 5665 667776653 36899999999873 3 2 4999999877
Q ss_pred cccCChHHHHHHHHHHHH--HhcCCCCCcEEEEEeecc
Q 043585 213 FHAFGGEDSLKILKKCRE--AIAGNGQRGKVLIMDIVI 248 (287)
Q Consensus 213 lh~~~d~~~~~iL~~~~~--al~~~~~~g~lli~e~~~ 248 (287)
+|.. .++..++++.+.+ .|+| ||.+++.....
T Consensus 123 ~~~~-~~~~~~~l~~~~~~~~L~p---gG~l~~~~~~~ 156 (189)
T 3p9n_A 123 YNVD-SADVDAILAALGTNGWTRE---GTVAVVERATT 156 (189)
T ss_dssp TTSC-HHHHHHHHHHHHHSSSCCT---TCEEEEEEETT
T ss_pred CCcc-hhhHHHHHHHHHhcCccCC---CeEEEEEecCC
Confidence 6643 4567889999999 9999 89988866543
No 158
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=97.96 E-value=5.6e-06 Score=71.56 Aligned_cols=111 Identities=12% Similarity=0.144 Sum_probs=72.9
Q ss_pred ccCcceEEEecCcc------------------cccc-hhhhhcCCC-------CCCceeeeccCccc---C------CCC
Q 043585 160 IERLGSMVDVGGGN------------------VLDL-PHAVANTPQ-------TENLKYVADDMFQF---I------PPA 204 (287)
Q Consensus 160 ~~~~~~vlDvGgG~------------------v~Dl-p~vi~~a~~-------~~Ri~~~~gd~~~~---~------p~~ 204 (287)
..+..+|||||||. .+|. |..++.+++ .+||+++.+|+.+. . ..|
T Consensus 58 ~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~~~~~~~~~~f 137 (242)
T 3r3h_A 58 LTRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLHSLLNEGGEHQF 137 (242)
T ss_dssp HHTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHHHHHHHHHCSSCE
T ss_pred hcCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHhhccCCCCE
Confidence 34678999999998 3444 445555543 46999999999772 2 359
Q ss_pred CeEEeccccccCChHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCCC------CCCCHHHHHHHHHhC-CCcEEEEE
Q 043585 205 DAYFFMLFFHAFGGEDSLKILKKCREAIAGNGQRGKVLIMDIVINEKEDE------DQRTDKEWKTLFLDA-GFTCCKIT 277 (287)
Q Consensus 205 D~~~l~~vlh~~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~------~~rt~~e~~~ll~~a-Gf~~~~~~ 277 (287)
|+|++... .++...+|+++.+.|+| ||.|++-+......... ..+...+|.+.+.+. +|. ..+.
T Consensus 138 D~V~~d~~-----~~~~~~~l~~~~~~Lkp---GG~lv~d~~~~~g~v~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~l 208 (242)
T 3r3h_A 138 DFIFIDAD-----KTNYLNYYELALKLVTP---KGLIAIDNIFWDGKVIDPNDTSGQTREIKKLNQVIKNDSRVF-VSLL 208 (242)
T ss_dssp EEEEEESC-----GGGHHHHHHHHHHHEEE---EEEEEEECSSSSSCSSCTTCCCHHHHHHHHHHHHHHTCCSEE-EEEE
T ss_pred eEEEEcCC-----hHHhHHHHHHHHHhcCC---CeEEEEECCccCCcccCccccChHHHHHHHHHHHHhhCCCEE-EEEE
Confidence 99987543 44566789999999999 88888766655432111 222356677777655 343 3444
Q ss_pred ec
Q 043585 278 TM 279 (287)
Q Consensus 278 ~~ 279 (287)
|+
T Consensus 209 p~ 210 (242)
T 3r3h_A 209 AI 210 (242)
T ss_dssp SS
T ss_pred Ec
Confidence 55
No 159
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=97.94 E-value=5e-06 Score=71.15 Aligned_cols=82 Identities=10% Similarity=0.245 Sum_probs=60.4
Q ss_pred ccCcceEEEecCcc-----------------cccc-hhhhhcCCC-------CCCceeeeccCcccCC-----CCCeEEe
Q 043585 160 IERLGSMVDVGGGN-----------------VLDL-PHAVANTPQ-------TENLKYVADDMFQFIP-----PADAYFF 209 (287)
Q Consensus 160 ~~~~~~vlDvGgG~-----------------v~Dl-p~vi~~a~~-------~~Ri~~~~gd~~~~~p-----~~D~~~l 209 (287)
..+..+|||||||. .+|. |..++.+++ .++|+++.+|+.+..| .||+|++
T Consensus 69 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~ 148 (232)
T 3ntv_A 69 MNNVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVNDKVYDMIFI 148 (232)
T ss_dssp HHTCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHHTTSCEEEEEE
T ss_pred hcCCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhhccCCccEEEE
Confidence 45678999999999 4565 666666653 3699999999987322 4999986
Q ss_pred ccccccCChHHHHHHHHHHHHHhcCCCCCcEEEEEeeccC
Q 043585 210 MLFFHAFGGEDSLKILKKCREAIAGNGQRGKVLIMDIVIN 249 (287)
Q Consensus 210 ~~vlh~~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~ 249 (287)
.. +.+....+++++++.|+| ||.|++-+....
T Consensus 149 ~~-----~~~~~~~~l~~~~~~Lkp---gG~lv~d~~~~~ 180 (232)
T 3ntv_A 149 DA-----AKAQSKKFFEIYTPLLKH---QGLVITDNVLYH 180 (232)
T ss_dssp ET-----TSSSHHHHHHHHGGGEEE---EEEEEEECTTGG
T ss_pred cC-----cHHHHHHHHHHHHHhcCC---CeEEEEeeCCcC
Confidence 53 234456799999999999 888877554443
No 160
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=97.92 E-value=5.8e-06 Score=71.54 Aligned_cols=112 Identities=9% Similarity=0.125 Sum_probs=74.6
Q ss_pred ccCcceEEEecCcc------------------cccc-hhhhhcCCC-------CCCceeeeccCccc---CC---CCCeE
Q 043585 160 IERLGSMVDVGGGN------------------VLDL-PHAVANTPQ-------TENLKYVADDMFQF---IP---PADAY 207 (287)
Q Consensus 160 ~~~~~~vlDvGgG~------------------v~Dl-p~vi~~a~~-------~~Ri~~~~gd~~~~---~p---~~D~~ 207 (287)
..+..+|||||||. .+|+ |..++.+++ .+||+++.+|+.+. .+ .||+|
T Consensus 61 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~fD~V 140 (248)
T 3tfw_A 61 LTQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLGECPAFDLI 140 (248)
T ss_dssp HHTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCCSCCCCSEE
T ss_pred hcCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcCCCCCeEEE
Confidence 45678999999999 4555 556665543 46899999998762 21 59999
Q ss_pred EeccccccCChHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCC-----CC-CCCCHHHHHHHHHhC-CCcEEEEEec
Q 043585 208 FFMLFFHAFGGEDSLKILKKCREAIAGNGQRGKVLIMDIVINEKE-----DE-DQRTDKEWKTLFLDA-GFTCCKITTM 279 (287)
Q Consensus 208 ~l~~vlh~~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~-----~~-~~rt~~e~~~ll~~a-Gf~~~~~~~~ 279 (287)
++.. +.+....+|+++++.|+| ||.|++.+....... .. ..+...++.+.+... +|....+.++
T Consensus 141 ~~d~-----~~~~~~~~l~~~~~~Lkp---GG~lv~~~~~~~g~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~ 211 (248)
T 3tfw_A 141 FIDA-----DKPNNPHYLRWALRYSRP---GTLIIGDNVVRDGEVVNPQSADERVQGVRQFIEMMGAEPRLTATALQTV 211 (248)
T ss_dssp EECS-----CGGGHHHHHHHHHHTCCT---TCEEEEECCSGGGGGGCTTCCCHHHHHHHHHHHHHHHCTTEEEEEEEEC
T ss_pred EECC-----chHHHHHHHHHHHHhcCC---CeEEEEeCCCcCCcccCccccchHHHHHHHHHHHHhhCCCEEEEEeecC
Confidence 8743 455567899999999999 898877666544111 00 222345666655544 6766555444
No 161
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=97.92 E-value=6.2e-06 Score=68.90 Aligned_cols=77 Identities=12% Similarity=0.068 Sum_probs=60.4
Q ss_pred cccCcceEEEecCcc---------------cccc-hhhhhcCCC------CCCceeeeccCcccCC---CCCeEEecccc
Q 043585 159 LIERLGSMVDVGGGN---------------VLDL-PHAVANTPQ------TENLKYVADDMFQFIP---PADAYFFMLFF 213 (287)
Q Consensus 159 ~~~~~~~vlDvGgG~---------------v~Dl-p~vi~~a~~------~~Ri~~~~gd~~~~~p---~~D~~~l~~vl 213 (287)
......+|||||||. .+|. |..++.+++ .++++++.+|+.+..+ .||+|++..++
T Consensus 74 ~~~~~~~vLdiG~G~G~~~~~la~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~i~~~~~~ 153 (210)
T 3lbf_A 74 ELTPQSRVLEIGTGSGYQTAILAHLVQHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGWQARAPFDAIIVTAAP 153 (210)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHHSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCEEEEEESSBC
T ss_pred CCCCCCEEEEEcCCCCHHHHHHHHhCCEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccCCccCCCccEEEEccch
Confidence 456678999999999 5665 666666653 3579999999988432 49999999999
Q ss_pred ccCChHHHHHHHHHHHHHhcCCCCCcEEEEEee
Q 043585 214 HAFGGEDSLKILKKCREAIAGNGQRGKVLIMDI 246 (287)
Q Consensus 214 h~~~d~~~~~iL~~~~~al~~~~~~g~lli~e~ 246 (287)
|++.+ .+++.|+| ||++++.-.
T Consensus 154 ~~~~~--------~~~~~L~p---gG~lv~~~~ 175 (210)
T 3lbf_A 154 PEIPT--------ALMTQLDE---GGILVLPVG 175 (210)
T ss_dssp SSCCT--------HHHHTEEE---EEEEEEEEC
T ss_pred hhhhH--------HHHHhccc---CcEEEEEEc
Confidence 99886 36788999 899888643
No 162
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=97.92 E-value=5.5e-06 Score=76.38 Aligned_cols=81 Identities=21% Similarity=0.374 Sum_probs=61.8
Q ss_pred CcceEEEecCcc-----------------cccc-hhhhhcCCC-------C--CCceeeeccCcccCC--CCCeEEeccc
Q 043585 162 RLGSMVDVGGGN-----------------VLDL-PHAVANTPQ-------T--ENLKYVADDMFQFIP--PADAYFFMLF 212 (287)
Q Consensus 162 ~~~~vlDvGgG~-----------------v~Dl-p~vi~~a~~-------~--~Ri~~~~gd~~~~~p--~~D~~~l~~v 212 (287)
...+|||+|||. .+|. +..++.+++ . .++++..+|++++++ .||+|++.-.
T Consensus 222 ~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~~~~~~~fD~Ii~npp 301 (375)
T 4dcm_A 222 LEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLCNPP 301 (375)
T ss_dssp CCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTTTCCTTCEEEEEECCC
T ss_pred CCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhccCCCCCeeEEEECCC
Confidence 347999999999 4665 566666653 1 258889999999766 4999999999
Q ss_pred ccc---CChHHHHHHHHHHHHHhcCCCCCcEEEEEe
Q 043585 213 FHA---FGGEDSLKILKKCREAIAGNGQRGKVLIMD 245 (287)
Q Consensus 213 lh~---~~d~~~~~iL~~~~~al~~~~~~g~lli~e 245 (287)
+|. ..+....++|+++++.|+| ||+++|+.
T Consensus 302 fh~~~~~~~~~~~~~l~~~~~~Lkp---gG~l~iv~ 334 (375)
T 4dcm_A 302 FHQQHALTDNVAWEMFHHARRCLKI---NGELYIVA 334 (375)
T ss_dssp C-------CCHHHHHHHHHHHHEEE---EEEEEEEE
T ss_pred cccCcccCHHHHHHHHHHHHHhCCC---CcEEEEEE
Confidence 884 4556667899999999999 99999864
No 163
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=97.92 E-value=7.5e-06 Score=69.30 Aligned_cols=101 Identities=13% Similarity=0.256 Sum_probs=70.7
Q ss_pred ccCcceEEEecCcc------------------cccc-hhhhhcCCC-------CCCceeeeccCcc---cCC------CC
Q 043585 160 IERLGSMVDVGGGN------------------VLDL-PHAVANTPQ-------TENLKYVADDMFQ---FIP------PA 204 (287)
Q Consensus 160 ~~~~~~vlDvGgG~------------------v~Dl-p~vi~~a~~-------~~Ri~~~~gd~~~---~~p------~~ 204 (287)
..+..+|||||||. .+|. |..++.+++ .+||+++.+|+.+ ..+ .+
T Consensus 56 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~~~f 135 (221)
T 3u81_A 56 EYSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDTL 135 (221)
T ss_dssp HHCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTTTTSCCCCC
T ss_pred hcCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHHHhcCCCce
Confidence 34678999999998 4554 566666653 4689999999855 222 49
Q ss_pred CeEEeccccccCChHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCCCCCCCHHHHHHHHHhCC-CcEE
Q 043585 205 DAYFFMLFFHAFGGEDSLKILKKCREAIAGNGQRGKVLIMDIVINEKEDEDQRTDKEWKTLFLDAG-FTCC 274 (287)
Q Consensus 205 D~~~l~~vlh~~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~~~rt~~e~~~ll~~aG-f~~~ 274 (287)
|+|++....|.+.+ ..++++.+ +.|+| ||.|++.+...+. ..++.+.+.+.. |+..
T Consensus 136 D~V~~d~~~~~~~~--~~~~~~~~-~~Lkp---gG~lv~~~~~~~~--------~~~~~~~l~~~~~~~~~ 192 (221)
T 3u81_A 136 DMVFLDHWKDRYLP--DTLLLEKC-GLLRK---GTVLLADNVIVPG--------TPDFLAYVRGSSSFECT 192 (221)
T ss_dssp SEEEECSCGGGHHH--HHHHHHHT-TCCCT---TCEEEESCCCCCC--------CHHHHHHHHHCTTEEEE
T ss_pred EEEEEcCCcccchH--HHHHHHhc-cccCC---CeEEEEeCCCCcc--------hHHHHHHHhhCCCceEE
Confidence 99999887777644 34677777 99999 8988776655432 246777776654 4433
No 164
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=97.90 E-value=1.1e-05 Score=72.42 Aligned_cols=110 Identities=10% Similarity=0.065 Sum_probs=75.4
Q ss_pred cccCcceEEEecCcc------------------cccc-hhhhhcCCC------CCCceeeeccCcc-c-CC-CCCeEEec
Q 043585 159 LIERLGSMVDVGGGN------------------VLDL-PHAVANTPQ------TENLKYVADDMFQ-F-IP-PADAYFFM 210 (287)
Q Consensus 159 ~~~~~~~vlDvGgG~------------------v~Dl-p~vi~~a~~------~~Ri~~~~gd~~~-~-~p-~~D~~~l~ 210 (287)
......+|||+|||. .+|. +..++.+++ ..+++++.+|+.+ + .+ .+|+|++.
T Consensus 115 ~~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~~~~~~~fD~Il~d 194 (315)
T 1ixk_A 115 DPKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIGELNVEFDKILLD 194 (315)
T ss_dssp CCCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGGGGCCCEEEEEEE
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhhcccccccCCEEEEe
Confidence 445678999999998 3454 444544442 3579999999987 3 23 49999973
Q ss_pred ------cccc-------cCChHHH-------HHHHHHHHHHhcCCCCCcEEEEEeeccCCCCCCCCCCHHHHHHHHHhCC
Q 043585 211 ------LFFH-------AFGGEDS-------LKILKKCREAIAGNGQRGKVLIMDIVINEKEDEDQRTDKEWKTLFLDAG 270 (287)
Q Consensus 211 ------~vlh-------~~~d~~~-------~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~~~rt~~e~~~ll~~aG 270 (287)
.+++ .|+.++. .++|+++++.|+| ||++++....+.. +-..+.....+++.|
T Consensus 195 ~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~Lkp---GG~lv~stcs~~~-----~Ene~~v~~~l~~~~ 266 (315)
T 1ixk_A 195 APCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKP---GGILVYSTCSLEP-----EENEFVIQWALDNFD 266 (315)
T ss_dssp CCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEEEESCCCG-----GGTHHHHHHHHHHSS
T ss_pred CCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCC---CCEEEEEeCCCCh-----HHhHHHHHHHHhcCC
Confidence 2333 3444432 5899999999999 9999987765432 123566778888889
Q ss_pred CcEEEE
Q 043585 271 FTCCKI 276 (287)
Q Consensus 271 f~~~~~ 276 (287)
|+.+.+
T Consensus 267 ~~~~~~ 272 (315)
T 1ixk_A 267 VELLPL 272 (315)
T ss_dssp EEEECC
T ss_pred CEEecC
Confidence 876543
No 165
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=97.90 E-value=8.2e-06 Score=73.70 Aligned_cols=79 Identities=11% Similarity=0.142 Sum_probs=59.4
Q ss_pred cCcceEEEecCcc----------------cccchhhhhcCCC-------CCCceeeeccCcc-cCC--CCCeEEeccccc
Q 043585 161 ERLGSMVDVGGGN----------------VLDLPHAVANTPQ-------TENLKYVADDMFQ-FIP--PADAYFFMLFFH 214 (287)
Q Consensus 161 ~~~~~vlDvGgG~----------------v~Dlp~vi~~a~~-------~~Ri~~~~gd~~~-~~p--~~D~~~l~~vlh 214 (287)
.+..+|||||||+ .+|..++++.+++ .++|+++.+|+.+ ++| .+|+|+...+.|
T Consensus 37 ~~~~~VLDiGcGtG~ls~~la~~g~~~v~~vD~s~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~~~~ 116 (328)
T 1g6q_1 37 FKDKIVLDVGCGTGILSMFAAKHGAKHVIGVDMSSIIEMAKELVELNGFSDKITLLRGKLEDVHLPFPKVDIIISEWMGY 116 (328)
T ss_dssp HTTCEEEEETCTTSHHHHHHHHTCCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSCCSSSCEEEEEECCCBT
T ss_pred cCCCEEEEecCccHHHHHHHHHCCCCEEEEEChHHHHHHHHHHHHHcCCCCCEEEEECchhhccCCCCcccEEEEeCchh
Confidence 4567999999999 4565555555542 4789999999988 566 499999886655
Q ss_pred cC-ChHHHHHHHHHHHHHhcCCCCCcEEE
Q 043585 215 AF-GGEDSLKILKKCREAIAGNGQRGKVL 242 (287)
Q Consensus 215 ~~-~d~~~~~iL~~~~~al~~~~~~g~ll 242 (287)
.. ..+....+|+.+++.|+| ||+++
T Consensus 117 ~l~~~~~~~~~l~~~~~~Lkp---gG~li 142 (328)
T 1g6q_1 117 FLLYESMMDTVLYARDHYLVE---GGLIF 142 (328)
T ss_dssp TBSTTCCHHHHHHHHHHHEEE---EEEEE
T ss_pred hcccHHHHHHHHHHHHhhcCC---CeEEE
Confidence 43 233345789999999999 88886
No 166
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=97.90 E-value=7.7e-06 Score=69.08 Aligned_cols=111 Identities=5% Similarity=0.095 Sum_probs=72.0
Q ss_pred ccCcceEEEecCcc------------------cccc-hhhhhcCCC-------CCCceeeeccCccc---C------CCC
Q 043585 160 IERLGSMVDVGGGN------------------VLDL-PHAVANTPQ-------TENLKYVADDMFQF---I------PPA 204 (287)
Q Consensus 160 ~~~~~~vlDvGgG~------------------v~Dl-p~vi~~a~~-------~~Ri~~~~gd~~~~---~------p~~ 204 (287)
..+..+|||||||. .+|. |..++.+++ .++++++.+|+.+. . ..|
T Consensus 62 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~f 141 (225)
T 3tr6_A 62 LMQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQY 141 (225)
T ss_dssp HHTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTTCE
T ss_pred hhCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCCCc
Confidence 34567999999998 3454 555555542 46899999998763 1 359
Q ss_pred CeEEeccccccCChHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCCC------CCCCHHHHHHHHHhC-CCcEEEEE
Q 043585 205 DAYFFMLFFHAFGGEDSLKILKKCREAIAGNGQRGKVLIMDIVINEKEDE------DQRTDKEWKTLFLDA-GFTCCKIT 277 (287)
Q Consensus 205 D~~~l~~vlh~~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~------~~rt~~e~~~ll~~a-Gf~~~~~~ 277 (287)
|+|++.. +.++...+++++++.|+| ||.|++.+......... ..+...+|.+.+... +|. ....
T Consensus 142 D~v~~~~-----~~~~~~~~l~~~~~~L~p---gG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~l 212 (225)
T 3tr6_A 142 DLIYIDA-----DKANTDLYYEESLKLLRE---GGLIAVDNVLRRGQVADEENQSENNQLIRLFNQKVYKDERVD-MILI 212 (225)
T ss_dssp EEEEECS-----CGGGHHHHHHHHHHHEEE---EEEEEEECSSGGGGGGCTTCCCHHHHHHHHHHHHHHHCTTEE-EEEE
T ss_pred cEEEECC-----CHHHHHHHHHHHHHhcCC---CcEEEEeCCCcCCcccCccccChHHHHHHHHHHHHhcCCCeE-EEEE
Confidence 9998543 345567899999999999 89888877665432111 122345666666544 343 3334
Q ss_pred ec
Q 043585 278 TM 279 (287)
Q Consensus 278 ~~ 279 (287)
|.
T Consensus 213 p~ 214 (225)
T 3tr6_A 213 PI 214 (225)
T ss_dssp CS
T ss_pred Ec
Confidence 44
No 167
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=97.90 E-value=1.2e-05 Score=75.34 Aligned_cols=88 Identities=18% Similarity=0.254 Sum_probs=63.7
Q ss_pred cccCcceEEEecCcc-----------------cccc-hhhhhcC-------CC--------CCCceeeeccCc-cc----
Q 043585 159 LIERLGSMVDVGGGN-----------------VLDL-PHAVANT-------PQ--------TENLKYVADDMF-QF---- 200 (287)
Q Consensus 159 ~~~~~~~vlDvGgG~-----------------v~Dl-p~vi~~a-------~~--------~~Ri~~~~gd~~-~~---- 200 (287)
......+|||||||. .+|+ +..++.| ++ .++|+++.+|.+ .+
T Consensus 239 ~l~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD~~~~~~~~~ 318 (433)
T 1u2z_A 239 QLKKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSFVDNNRVA 318 (433)
T ss_dssp TCCTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCSTTCHHHH
T ss_pred CCCCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcCccccccccc
Confidence 345678999999999 4554 4444444 32 268999987544 21
Q ss_pred --CCCCCeEEeccccccCChHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCC
Q 043585 201 --IPPADAYFFMLFFHAFGGEDSLKILKKCREAIAGNGQRGKVLIMDIVINEKE 252 (287)
Q Consensus 201 --~p~~D~~~l~~vlh~~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~ 252 (287)
...||+|++.++++ . ++....|+++.+.|+| ||+|++.+.+.+...
T Consensus 319 ~~~~~FDvIvvn~~l~--~-~d~~~~L~el~r~LKp---GG~lVi~d~f~p~~~ 366 (433)
T 1u2z_A 319 ELIPQCDVILVNNFLF--D-EDLNKKVEKILQTAKV---GCKIISLKSLRSLTY 366 (433)
T ss_dssp HHGGGCSEEEECCTTC--C-HHHHHHHHHHHTTCCT---TCEEEESSCSSCTTC
T ss_pred cccCCCCEEEEeCccc--c-ccHHHHHHHHHHhCCC---CeEEEEeeccCCccc
Confidence 22599999887774 2 3456788999999999 999999988877653
No 168
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=97.88 E-value=5e-06 Score=76.62 Aligned_cols=85 Identities=8% Similarity=0.029 Sum_probs=64.1
Q ss_pred ccCcceEEEecCcc----------------cccchhhhhcCCC-------CCCceeeeccCcc-cCC-CCCeEEeccccc
Q 043585 160 IERLGSMVDVGGGN----------------VLDLPHAVANTPQ-------TENLKYVADDMFQ-FIP-PADAYFFMLFFH 214 (287)
Q Consensus 160 ~~~~~~vlDvGgG~----------------v~Dlp~vi~~a~~-------~~Ri~~~~gd~~~-~~p-~~D~~~l~~vlh 214 (287)
.....+|||||||. .+|..++++.+++ .++|+++.+|+.+ +.| .+|+|++..+.|
T Consensus 61 ~~~~~~VLDlGcGtG~ls~~la~~g~~~V~gvD~s~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~Iv~~~~~~ 140 (376)
T 3r0q_C 61 HFEGKTVLDVGTGSGILAIWSAQAGARKVYAVEATKMADHARALVKANNLDHIVEVIEGSVEDISLPEKVDVIISEWMGY 140 (376)
T ss_dssp TTTTCEEEEESCTTTHHHHHHHHTTCSEEEEEESSTTHHHHHHHHHHTTCTTTEEEEESCGGGCCCSSCEEEEEECCCBT
T ss_pred cCCCCEEEEeccCcCHHHHHHHhcCCCEEEEEccHHHHHHHHHHHHHcCCCCeEEEEECchhhcCcCCcceEEEEcChhh
Confidence 45568999999999 4565555555542 5789999999988 555 499999977666
Q ss_pred cCCh-HHHHHHHHHHHHHhcCCCCCcEEEEEeec
Q 043585 215 AFGG-EDSLKILKKCREAIAGNGQRGKVLIMDIV 247 (287)
Q Consensus 215 ~~~d-~~~~~iL~~~~~al~~~~~~g~lli~e~~ 247 (287)
.... +....+|+.+++.|+| ||.+++.+..
T Consensus 141 ~l~~e~~~~~~l~~~~~~Lkp---gG~li~~~~~ 171 (376)
T 3r0q_C 141 FLLRESMFDSVISARDRWLKP---TGVMYPSHAR 171 (376)
T ss_dssp TBTTTCTHHHHHHHHHHHEEE---EEEEESSEEE
T ss_pred cccchHHHHHHHHHHHhhCCC---CeEEEEecCe
Confidence 6543 3356799999999999 8988765554
No 169
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=97.87 E-value=7.2e-06 Score=69.24 Aligned_cols=111 Identities=7% Similarity=0.056 Sum_probs=72.5
Q ss_pred ccCcceEEEecCcc------------------cccc-hhhhhcCCC-------CCCceeeeccCcccC--------CCCC
Q 043585 160 IERLGSMVDVGGGN------------------VLDL-PHAVANTPQ-------TENLKYVADDMFQFI--------PPAD 205 (287)
Q Consensus 160 ~~~~~~vlDvGgG~------------------v~Dl-p~vi~~a~~-------~~Ri~~~~gd~~~~~--------p~~D 205 (287)
..+..+|||||||. .+|. |..++.+++ .+|++++.+|+.+.. ..||
T Consensus 56 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD 135 (223)
T 3duw_A 56 IQGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENEKYEPFD 135 (223)
T ss_dssp HHTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCCCCS
T ss_pred hhCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCcC
Confidence 35678999999998 4554 556655542 468999999997631 2499
Q ss_pred eEEeccccccCChHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCC-C-----CCCCHHHHHHHHHhC-CCcEEEEEe
Q 043585 206 AYFFMLFFHAFGGEDSLKILKKCREAIAGNGQRGKVLIMDIVINEKED-E-----DQRTDKEWKTLFLDA-GFTCCKITT 278 (287)
Q Consensus 206 ~~~l~~vlh~~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~-~-----~~rt~~e~~~ll~~a-Gf~~~~~~~ 278 (287)
+|++... .+....+|+++.+.|+| ||.|++.+........ + ..+...+|.+.+... .|. ..+.+
T Consensus 136 ~v~~d~~-----~~~~~~~l~~~~~~L~p---gG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~p 206 (223)
T 3duw_A 136 FIFIDAD-----KQNNPAYFEWALKLSRP---GTVIIGDNVVREGEVIDNTSNDPRVQGIRRFYELIAAEPRVS-ATALQ 206 (223)
T ss_dssp EEEECSC-----GGGHHHHHHHHHHTCCT---TCEEEEESCSGGGGGGCTTCCCHHHHHHHHHHHHHHHCTTEE-EEEEE
T ss_pred EEEEcCC-----cHHHHHHHHHHHHhcCC---CcEEEEeCCCcCCcccCccccchHHHHHHHHHHHHhhCCCeE-EEEEe
Confidence 9987544 34556899999999999 8977776665542110 0 222345666666554 444 33444
Q ss_pred c
Q 043585 279 M 279 (287)
Q Consensus 279 ~ 279 (287)
+
T Consensus 207 ~ 207 (223)
T 3duw_A 207 T 207 (223)
T ss_dssp E
T ss_pred c
Confidence 4
No 170
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=97.86 E-value=1.1e-05 Score=73.18 Aligned_cols=80 Identities=15% Similarity=0.141 Sum_probs=59.8
Q ss_pred ccCcceEEEecCcc----------------cccchhhhhcCCC-------CCCceeeeccCcc-cCC--CCCeEEecccc
Q 043585 160 IERLGSMVDVGGGN----------------VLDLPHAVANTPQ-------TENLKYVADDMFQ-FIP--PADAYFFMLFF 213 (287)
Q Consensus 160 ~~~~~~vlDvGgG~----------------v~Dlp~vi~~a~~-------~~Ri~~~~gd~~~-~~p--~~D~~~l~~vl 213 (287)
..+..+|||||||. .+|..++++.+++ .++|+++.+|+.+ ++| .+|+|+...+.
T Consensus 62 ~~~~~~VLDiGcGtG~ls~~la~~g~~~v~gvD~s~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~~~ 141 (340)
T 2fyt_A 62 IFKDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSEILYQAMDIIRLNKLEDTITLIKGKIEEVHLPVEKVDVIISEWMG 141 (340)
T ss_dssp GTTTCEEEEETCTTSHHHHHHHHTTCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSCCSCSCEEEEEECCCB
T ss_pred hcCCCEEEEeeccCcHHHHHHHHcCCCEEEEEChHHHHHHHHHHHHHcCCCCcEEEEEeeHHHhcCCCCcEEEEEEcCch
Confidence 45567999999999 4666446666553 3799999999988 566 49999987743
Q ss_pred ccC-ChHHHHHHHHHHHHHhcCCCCCcEEE
Q 043585 214 HAF-GGEDSLKILKKCREAIAGNGQRGKVL 242 (287)
Q Consensus 214 h~~-~d~~~~~iL~~~~~al~~~~~~g~ll 242 (287)
+.+ .......+|+.+++.|+| ||+++
T Consensus 142 ~~l~~~~~~~~~l~~~~~~Lkp---gG~li 168 (340)
T 2fyt_A 142 YFLLFESMLDSVLYAKNKYLAK---GGSVY 168 (340)
T ss_dssp TTBTTTCHHHHHHHHHHHHEEE---EEEEE
T ss_pred hhccCHHHHHHHHHHHHhhcCC---CcEEE
Confidence 332 233456799999999999 89887
No 171
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=97.82 E-value=2.6e-05 Score=67.05 Aligned_cols=102 Identities=15% Similarity=0.124 Sum_probs=69.5
Q ss_pred CcceEEEecCcc---------------------cccc-hhhhhcCCC-CCCceeeeccCccc--C---C--CCCeEEecc
Q 043585 162 RLGSMVDVGGGN---------------------VLDL-PHAVANTPQ-TENLKYVADDMFQF--I---P--PADAYFFML 211 (287)
Q Consensus 162 ~~~~vlDvGgG~---------------------v~Dl-p~vi~~a~~-~~Ri~~~~gd~~~~--~---p--~~D~~~l~~ 211 (287)
+..+|||||||+ .+|+ |.+++.++. .++|+++.+|+.+. + + .+|+|++..
T Consensus 81 ~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~~~~~v~~~~gD~~~~~~l~~~~~~~fD~I~~d~ 160 (236)
T 2bm8_A 81 RPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPASDMENITLHQGDCSDLTTFEHLREMAHPLIFIDN 160 (236)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGGGCTTEEEEECCSSCSGGGGGGSSSCSSEEEEES
T ss_pred CCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhccCCceEEEECcchhHHHHHhhccCCCCEEEECC
Confidence 457999999998 1222 334444433 47899999999873 2 2 389988765
Q ss_pred ccccCChHHHHHHHHHHHH-HhcCCCCCcEEEEEeeccCCCCCCCCCCHHHHHHHHHhC--CCcEEE
Q 043585 212 FFHAFGGEDSLKILKKCRE-AIAGNGQRGKVLIMDIVINEKEDEDQRTDKEWKTLFLDA--GFTCCK 275 (287)
Q Consensus 212 vlh~~~d~~~~~iL~~~~~-al~~~~~~g~lli~e~~~~~~~~~~~rt~~e~~~ll~~a--Gf~~~~ 275 (287)
. |. +...+|+.+++ .|+| ||++++.+...- ......+++.++++++ +|++..
T Consensus 161 ~-~~----~~~~~l~~~~r~~Lkp---GG~lv~~d~~~~----~~~~~~~~~~~~l~~~~~~f~~~~ 215 (236)
T 2bm8_A 161 A-HA----NTFNIMKWAVDHLLEE---GDYFIIEDMIPY----WYRYAPQLFSEYLGAFRDVLSMDM 215 (236)
T ss_dssp S-CS----SHHHHHHHHHHHTCCT---TCEEEECSCHHH----HHHHCHHHHHHHHHTTTTTEEEET
T ss_pred c-hH----hHHHHHHHHHHhhCCC---CCEEEEEeCccc----ccccCHHHHHHHHHhCcccEEEcc
Confidence 4 53 34679999997 9999 999998775100 0122445888899988 677653
No 172
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=97.80 E-value=1.4e-05 Score=67.69 Aligned_cols=77 Identities=13% Similarity=0.100 Sum_probs=59.0
Q ss_pred cccCcceEEEecCcc---------------cccc-hhhhhcCCC----CCCceeeeccCcccCC---CCCeEEecccccc
Q 043585 159 LIERLGSMVDVGGGN---------------VLDL-PHAVANTPQ----TENLKYVADDMFQFIP---PADAYFFMLFFHA 215 (287)
Q Consensus 159 ~~~~~~~vlDvGgG~---------------v~Dl-p~vi~~a~~----~~Ri~~~~gd~~~~~p---~~D~~~l~~vlh~ 215 (287)
......+|||||||. .+|. |..++.+++ ..+++++.+|+.+..+ .+|+|++..++|+
T Consensus 67 ~~~~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~~~~ 146 (231)
T 1vbf_A 67 DLHKGQKVLEIGTGIGYYTALIAEIVDKVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLGYEEEKPYDRVVVWATAPT 146 (231)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHHSSEEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGCCGGGCCEEEEEESSBBSS
T ss_pred CCCCCCEEEEEcCCCCHHHHHHHHHcCEEEEEeCCHHHHHHHHHHHhhcCCeEEEECCcccccccCCCccEEEECCcHHH
Confidence 345667999999998 4554 556665543 2289999999987433 4999999999998
Q ss_pred CChHHHHHHHHHHHHHhcCCCCCcEEEEEee
Q 043585 216 FGGEDSLKILKKCREAIAGNGQRGKVLIMDI 246 (287)
Q Consensus 216 ~~d~~~~~iL~~~~~al~~~~~~g~lli~e~ 246 (287)
+.+ .+++.|+| ||++++...
T Consensus 147 ~~~--------~~~~~L~p---gG~l~~~~~ 166 (231)
T 1vbf_A 147 LLC--------KPYEQLKE---GGIMILPIG 166 (231)
T ss_dssp CCH--------HHHHTEEE---EEEEEEEEC
T ss_pred HHH--------HHHHHcCC---CcEEEEEEc
Confidence 875 46788999 999998754
No 173
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=97.79 E-value=1.2e-05 Score=71.77 Aligned_cols=110 Identities=16% Similarity=0.178 Sum_probs=68.0
Q ss_pred cCcceEEEecCcc-----------------cccc-hhhhhcCCC-----------CCCceeeeccCcccC--C--CCCeE
Q 043585 161 ERLGSMVDVGGGN-----------------VLDL-PHAVANTPQ-----------TENLKYVADDMFQFI--P--PADAY 207 (287)
Q Consensus 161 ~~~~~vlDvGgG~-----------------v~Dl-p~vi~~a~~-----------~~Ri~~~~gd~~~~~--p--~~D~~ 207 (287)
.+..+|||||||. .+|+ |.+++.+++ .+|++++.+|.++.. + .||+|
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvI 161 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVI 161 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEE
T ss_pred CCCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEE
Confidence 4578999999998 4665 666666542 469999999988742 2 49999
Q ss_pred EeccccccCChHHH--HHHHHHHHHHhcCCCCCcEEEEEeeccCCCCCCCCCCHHHHHHHHHhCCCcEEEEEe
Q 043585 208 FFMLFFHAFGGEDS--LKILKKCREAIAGNGQRGKVLIMDIVINEKEDEDQRTDKEWKTLFLDAGFTCCKITT 278 (287)
Q Consensus 208 ~l~~vlh~~~d~~~--~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~~~rt~~e~~~ll~~aGf~~~~~~~ 278 (287)
++--.-+.-+.+.. ..+++.++++|+| ||.+++.-.. +.. ......++.+.++++ |..+..+.
T Consensus 162 i~D~~~p~~~~~~l~~~~f~~~~~~~Lkp---gG~lv~~~~s-~~~---~~~~~~~~~~~l~~~-F~~v~~~~ 226 (294)
T 3adn_A 162 ISDCTDPIGPGESLFTSAFYEGCKRCLNP---GGIFVAQNGV-CFL---QQEEAIDSHRKLSHY-FSDVGFYQ 226 (294)
T ss_dssp EECC----------CCHHHHHHHHHTEEE---EEEEEEEEEE-CSS---CCHHHHHHHHHHHHH-CSEEEEEE
T ss_pred EECCCCccCcchhccHHHHHHHHHHhcCC---CCEEEEecCC-ccc---chHHHHHHHHHHHHH-CCCeEEEE
Confidence 98444332222211 5799999999999 8888775321 110 112244555556666 77666543
No 174
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=97.79 E-value=1e-05 Score=68.97 Aligned_cols=108 Identities=6% Similarity=0.123 Sum_probs=68.9
Q ss_pred ceEEEecCcc------------------cccc-hhhhhcCCC-------C-CCceeeeccCccc---C-C-CCCeEEecc
Q 043585 164 GSMVDVGGGN------------------VLDL-PHAVANTPQ-------T-ENLKYVADDMFQF---I-P-PADAYFFML 211 (287)
Q Consensus 164 ~~vlDvGgG~------------------v~Dl-p~vi~~a~~-------~-~Ri~~~~gd~~~~---~-p-~~D~~~l~~ 211 (287)
.+|||||||. .+|. |..++.+++ . +||+++.+|..+. + + .||+|++..
T Consensus 58 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~~~~~~~fD~V~~d~ 137 (221)
T 3dr5_A 58 TGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMSRLANDSYQLVFGQV 137 (221)
T ss_dssp CEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGGGSCTTCEEEEEECC
T ss_pred CCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHHHhcCCCcCeEEEcC
Confidence 3999999998 4554 555655543 3 6899999998772 3 2 499998754
Q ss_pred ccccCChHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCC---CCCCC---HHHHHHHHHhC-CCcEEEEEecC
Q 043585 212 FFHAFGGEDSLKILKKCREAIAGNGQRGKVLIMDIVINEKED---EDQRT---DKEWKTLFLDA-GFTCCKITTMF 280 (287)
Q Consensus 212 vlh~~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~---~~~rt---~~e~~~ll~~a-Gf~~~~~~~~~ 280 (287)
. ..+...+++.+.+.|+| ||.|++-+........ ...++ ..+|.+++.+. +|. ..+.|+.
T Consensus 138 ~-----~~~~~~~l~~~~~~Lkp---GG~lv~dn~~~~g~v~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~lp~g 204 (221)
T 3dr5_A 138 S-----PMDLKALVDAAWPLLRR---GGALVLADALLDGTIADQTRKDRDTQAARDADEYIRSIEGAH-VARLPLG 204 (221)
T ss_dssp C-----TTTHHHHHHHHHHHEEE---EEEEEETTTTGGGTCSCSSCCCHHHHHHHHHHHHHTTCTTEE-EEEESST
T ss_pred c-----HHHHHHHHHHHHHHcCC---CcEEEEeCCCCCCcCCCCCCCChHHHHHHHHHHHHhhCCCee-EEEeecc
Confidence 3 33456789999999999 8887776655432111 12222 25666666654 333 3345554
No 175
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=97.78 E-value=1.3e-05 Score=68.65 Aligned_cols=113 Identities=8% Similarity=0.137 Sum_probs=72.4
Q ss_pred ccCcceEEEecCcc------------------cccc-hhhhhcCCC-------CCCceeeeccCccc---C---------
Q 043585 160 IERLGSMVDVGGGN------------------VLDL-PHAVANTPQ-------TENLKYVADDMFQF---I--------- 201 (287)
Q Consensus 160 ~~~~~~vlDvGgG~------------------v~Dl-p~vi~~a~~-------~~Ri~~~~gd~~~~---~--------- 201 (287)
..+..+|||||||. .+|. |..++.+++ .++++++.+|+.+. +
T Consensus 58 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~~ 137 (239)
T 2hnk_A 58 ISGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPSW 137 (239)
T ss_dssp HHTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCCGG
T ss_pred hhCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhcccccc
Confidence 35678999999998 3444 555555543 35799999998762 1
Q ss_pred --------CCCCeEEeccccccCChHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCC-----CCC-CCCCHHHHHHHHH
Q 043585 202 --------PPADAYFFMLFFHAFGGEDSLKILKKCREAIAGNGQRGKVLIMDIVINEK-----EDE-DQRTDKEWKTLFL 267 (287)
Q Consensus 202 --------p~~D~~~l~~vlh~~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~-----~~~-~~rt~~e~~~ll~ 267 (287)
..||+|++... .+....+|+++++.|+| ||.+++.+...+.. ... ..+...+|.+.+.
T Consensus 138 ~~~f~~~~~~fD~I~~~~~-----~~~~~~~l~~~~~~L~p---gG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 209 (239)
T 2hnk_A 138 ASDFAFGPSSIDLFFLDAD-----KENYPNYYPLILKLLKP---GGLLIADNVLWDGSVADLSHQEPSTVGIRKFNELVY 209 (239)
T ss_dssp GTTTCCSTTCEEEEEECSC-----GGGHHHHHHHHHHHEEE---EEEEEEECSSGGGGGGCTTCCCHHHHHHHHHHHHHH
T ss_pred cccccCCCCCcCEEEEeCC-----HHHHHHHHHHHHHHcCC---CeEEEEEccccCCcccCccccchHHHHHHHHHHHHh
Confidence 34899987643 44566889999999999 89888876544321 111 1123345555565
Q ss_pred hCCCcEEEEEecC
Q 043585 268 DAGFTCCKITTMF 280 (287)
Q Consensus 268 ~aGf~~~~~~~~~ 280 (287)
....-.+...|+.
T Consensus 210 ~~~~~~~~~~p~~ 222 (239)
T 2hnk_A 210 NDSLVDVSLVPIA 222 (239)
T ss_dssp HCTTEEEEEECST
T ss_pred hCCCeEEEEEEcC
Confidence 5544444555663
No 176
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=97.77 E-value=2.1e-05 Score=68.77 Aligned_cols=102 Identities=11% Similarity=0.152 Sum_probs=72.2
Q ss_pred cccCcceEEEecCcc------------------cccc-hhhhhcCCC---------CCCceeeeccCcc-cCC--CCCeE
Q 043585 159 LIERLGSMVDVGGGN------------------VLDL-PHAVANTPQ---------TENLKYVADDMFQ-FIP--PADAY 207 (287)
Q Consensus 159 ~~~~~~~vlDvGgG~------------------v~Dl-p~vi~~a~~---------~~Ri~~~~gd~~~-~~p--~~D~~ 207 (287)
+.....+|||+|||. .+|. |..++.+++ .++++++.+|+.+ +++ .+|+|
T Consensus 96 ~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~~~~~~~~D~v 175 (280)
T 1i9g_A 96 DIFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSELPDGSVDRA 175 (280)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCCCCTTCEEEE
T ss_pred CCCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhcCCCCCceeEE
Confidence 456678999999998 4555 556555542 2589999999988 444 49999
Q ss_pred EeccccccCChHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCCCCCCCHHHHHHHHHh-CCCcEEEEEe
Q 043585 208 FFMLFFHAFGGEDSLKILKKCREAIAGNGQRGKVLIMDIVINEKEDEDQRTDKEWKTLFLD-AGFTCCKITT 278 (287)
Q Consensus 208 ~l~~vlh~~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~~~rt~~e~~~ll~~-aGf~~~~~~~ 278 (287)
++ + .++. ..+|+++++.|+| ||++++...... ...+..+.+++ .||...+++.
T Consensus 176 ~~-~----~~~~--~~~l~~~~~~L~p---gG~l~~~~~~~~--------~~~~~~~~l~~~~~f~~~~~~~ 229 (280)
T 1i9g_A 176 VL-D----MLAP--WEVLDAVSRLLVA---GGVLMVYVATVT--------QLSRIVEALRAKQCWTEPRAWE 229 (280)
T ss_dssp EE-E----SSCG--GGGHHHHHHHEEE---EEEEEEEESSHH--------HHHHHHHHHHHHSSBCCCEEEC
T ss_pred EE-C----CcCH--HHHHHHHHHhCCC---CCEEEEEeCCHH--------HHHHHHHHHHhcCCcCCcEEEE
Confidence 87 2 2222 2689999999999 999999765332 24556666666 7888766654
No 177
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=97.75 E-value=3e-05 Score=67.52 Aligned_cols=107 Identities=11% Similarity=0.158 Sum_probs=72.6
Q ss_pred ccCcceEEEecCcc-----------------cccc-hhhhhcCCC----------CCCceeeeccCccc--------CC-
Q 043585 160 IERLGSMVDVGGGN-----------------VLDL-PHAVANTPQ----------TENLKYVADDMFQF--------IP- 202 (287)
Q Consensus 160 ~~~~~~vlDvGgG~-----------------v~Dl-p~vi~~a~~----------~~Ri~~~~gd~~~~--------~p- 202 (287)
.....+|||+|||. .+|+ |.+++.+++ .+|++++.+|+.+. ++
T Consensus 34 ~~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~~~~ 113 (260)
T 2ozv_A 34 DDRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEAGLPD 113 (260)
T ss_dssp CCSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHTTCCT
T ss_pred ccCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhhccCC
Confidence 34567999999999 4555 555555432 24799999999874 23
Q ss_pred -CCCeEEeccccc----------------cCChHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCCCCCCCHHHHHHH
Q 043585 203 -PADAYFFMLFFH----------------AFGGEDSLKILKKCREAIAGNGQRGKVLIMDIVINEKEDEDQRTDKEWKTL 265 (287)
Q Consensus 203 -~~D~~~l~~vlh----------------~~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~~~rt~~e~~~l 265 (287)
.||+|++.-..+ +........+++.+++.|+| ||+++++- +. ....++.++
T Consensus 114 ~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~Lkp---gG~l~~~~---~~------~~~~~~~~~ 181 (260)
T 2ozv_A 114 EHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVS---GGQLSLIS---RP------QSVAEIIAA 181 (260)
T ss_dssp TCEEEEEECCCC---------------------CCHHHHHHHHHHHEEE---EEEEEEEE---CG------GGHHHHHHH
T ss_pred CCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCC---CCEEEEEE---cH------HHHHHHHHH
Confidence 499999973322 22233357899999999999 99998853 21 136778888
Q ss_pred HHhCCCcEEEEEec
Q 043585 266 FLDAGFTCCKITTM 279 (287)
Q Consensus 266 l~~aGf~~~~~~~~ 279 (287)
+++. |...++...
T Consensus 182 l~~~-~~~~~i~~v 194 (260)
T 2ozv_A 182 CGSR-FGGLEITLI 194 (260)
T ss_dssp HTTT-EEEEEEEEE
T ss_pred HHhc-CCceEEEEE
Confidence 8875 876666654
No 178
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=97.75 E-value=2.8e-05 Score=66.99 Aligned_cols=53 Identities=13% Similarity=0.138 Sum_probs=42.8
Q ss_pred eeeccCcccC------C--CCCeEEeccccccCCh-------HHHHHHHHHHHHHhcCCCCCcEEEEEeec
Q 043585 192 YVADDMFQFI------P--PADAYFFMLFFHAFGG-------EDSLKILKKCREAIAGNGQRGKVLIMDIV 247 (287)
Q Consensus 192 ~~~gd~~~~~------p--~~D~~~l~~vlh~~~d-------~~~~~iL~~~~~al~~~~~~g~lli~e~~ 247 (287)
++.+|++++. + .+|+|++...++...+ +....+++++++.|+| ||+++++...
T Consensus 149 ~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~Lkp---gG~l~~~~~~ 216 (250)
T 1o9g_A 149 IRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPA---HAVIAVTDRS 216 (250)
T ss_dssp EEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCT---TCEEEEEESS
T ss_pred eeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcCC---CcEEEEeCcc
Confidence 9999999854 3 5999999877665443 6678999999999999 9999986543
No 179
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=97.71 E-value=3.1e-05 Score=66.18 Aligned_cols=101 Identities=13% Similarity=0.151 Sum_probs=71.9
Q ss_pred cccCcceEEEecCcc---------------cccc-hhhhhcCCC-------CCCceeeeccCcccC-C--CCCeEEeccc
Q 043585 159 LIERLGSMVDVGGGN---------------VLDL-PHAVANTPQ-------TENLKYVADDMFQFI-P--PADAYFFMLF 212 (287)
Q Consensus 159 ~~~~~~~vlDvGgG~---------------v~Dl-p~vi~~a~~-------~~Ri~~~~gd~~~~~-p--~~D~~~l~~v 212 (287)
......+|||+|||. .+|. |..++.+++ .+++++..+|+.+.. + .+|+|++
T Consensus 88 ~~~~~~~vldiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~--- 164 (248)
T 2yvl_A 88 NLNKEKRVLEFGTGSGALLAVLSEVAGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEVPEGIFHAAFV--- 164 (248)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHHSSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCCCTTCBSEEEE---
T ss_pred CCCCCCEEEEeCCCccHHHHHHHHhCCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcccCCCcccEEEE---
Confidence 445678999999998 5664 556665543 378999999999865 4 4999987
Q ss_pred cccCChHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCCCCCCCHHHHHHHHHhCCCcEEEEEe
Q 043585 213 FHAFGGEDSLKILKKCREAIAGNGQRGKVLIMDIVINEKEDEDQRTDKEWKTLFLDAGFTCCKITT 278 (287)
Q Consensus 213 lh~~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~~~rt~~e~~~ll~~aGf~~~~~~~ 278 (287)
+.++ ...+|+++.+.|+| ||++++...... ...+..+++++. |...++..
T Consensus 165 --~~~~--~~~~l~~~~~~L~~---gG~l~~~~~~~~--------~~~~~~~~l~~~-f~~~~~~~ 214 (248)
T 2yvl_A 165 --DVRE--PWHYLEKVHKSLME---GAPVGFLLPTAN--------QVIKLLESIENY-FGNLEVVE 214 (248)
T ss_dssp --CSSC--GGGGHHHHHHHBCT---TCEEEEEESSHH--------HHHHHHHHSTTT-EEEEEEEE
T ss_pred --CCcC--HHHHHHHHHHHcCC---CCEEEEEeCCHH--------HHHHHHHHHHhh-CCcceEEE
Confidence 2332 24688999999999 999999764332 245666677766 77665554
No 180
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=97.69 E-value=2.6e-05 Score=65.32 Aligned_cols=76 Identities=13% Similarity=0.131 Sum_probs=57.6
Q ss_pred cccCcceEEEecCcc------------------cccc-hhhhhcCCC------CCCceeeeccCcccCC---CCCeEEec
Q 043585 159 LIERLGSMVDVGGGN------------------VLDL-PHAVANTPQ------TENLKYVADDMFQFIP---PADAYFFM 210 (287)
Q Consensus 159 ~~~~~~~vlDvGgG~------------------v~Dl-p~vi~~a~~------~~Ri~~~~gd~~~~~p---~~D~~~l~ 210 (287)
......+|||||||. .+|. |..++.+++ .+++++..+|+..+.+ .||+|++.
T Consensus 74 ~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~ 153 (215)
T 2yxe_A 74 DLKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTLGYEPLAPYDRIYTT 153 (215)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGGCCGGGCCEEEEEES
T ss_pred CCCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCCCCCCCeeEEEEC
Confidence 345667999999998 3343 455555543 3579999999876544 49999999
Q ss_pred cccccCChHHHHHHHHHHHHHhcCCCCCcEEEEEe
Q 043585 211 LFFHAFGGEDSLKILKKCREAIAGNGQRGKVLIMD 245 (287)
Q Consensus 211 ~vlh~~~d~~~~~iL~~~~~al~~~~~~g~lli~e 245 (287)
.++|++.+ ++++.|+| ||++++..
T Consensus 154 ~~~~~~~~--------~~~~~L~p---gG~lv~~~ 177 (215)
T 2yxe_A 154 AAGPKIPE--------PLIRQLKD---GGKLLMPV 177 (215)
T ss_dssp SBBSSCCH--------HHHHTEEE---EEEEEEEE
T ss_pred CchHHHHH--------HHHHHcCC---CcEEEEEE
Confidence 99998873 67788999 99998874
No 181
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=97.69 E-value=2.2e-05 Score=66.77 Aligned_cols=81 Identities=9% Similarity=0.173 Sum_probs=60.7
Q ss_pred ccCcceEEEecCcc-----------------cccc-hhhhhcCCC-------CCCceeeeccCccc---C--C-CCCeEE
Q 043585 160 IERLGSMVDVGGGN-----------------VLDL-PHAVANTPQ-------TENLKYVADDMFQF---I--P-PADAYF 208 (287)
Q Consensus 160 ~~~~~~vlDvGgG~-----------------v~Dl-p~vi~~a~~-------~~Ri~~~~gd~~~~---~--p-~~D~~~ 208 (287)
..+..+|||||||. .+|. |..++.+++ .++|+++.+|+.+. . + .||+|+
T Consensus 52 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~ 131 (233)
T 2gpy_A 52 MAAPARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLELYPLFDVLF 131 (233)
T ss_dssp HHCCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTTSCCEEEEE
T ss_pred ccCCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcccCCCccEEE
Confidence 34567999999998 4555 556665543 36899999999873 2 2 499999
Q ss_pred eccccccCChHHHHHHHHHHHHHhcCCCCCcEEEEEeecc
Q 043585 209 FMLFFHAFGGEDSLKILKKCREAIAGNGQRGKVLIMDIVI 248 (287)
Q Consensus 209 l~~vlh~~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~ 248 (287)
+....+ +...+|+++.+.|+| ||++++.+...
T Consensus 132 ~~~~~~-----~~~~~l~~~~~~L~p---gG~lv~~~~~~ 163 (233)
T 2gpy_A 132 IDAAKG-----QYRRFFDMYSPMVRP---GGLILSDNVLF 163 (233)
T ss_dssp EEGGGS-----CHHHHHHHHGGGEEE---EEEEEEETTTC
T ss_pred ECCCHH-----HHHHHHHHHHHHcCC---CeEEEEEcCCc
Confidence 877654 456799999999999 89888865543
No 182
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=97.67 E-value=3.5e-05 Score=67.87 Aligned_cols=110 Identities=13% Similarity=0.073 Sum_probs=72.5
Q ss_pred cCcceEEEecCcc-----------------cccc-hhhhhcCCC----------CCCceeeeccCccc--C-C-CCCeEE
Q 043585 161 ERLGSMVDVGGGN-----------------VLDL-PHAVANTPQ----------TENLKYVADDMFQF--I-P-PADAYF 208 (287)
Q Consensus 161 ~~~~~vlDvGgG~-----------------v~Dl-p~vi~~a~~----------~~Ri~~~~gd~~~~--~-p-~~D~~~ 208 (287)
.+..+|||||||. .+|+ |.+++.+++ .+|++++.+|..+. . + .||+|+
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii 153 (275)
T 1iy9_A 74 PNPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIM 153 (275)
T ss_dssp SSCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEE
T ss_pred CCCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEEE
Confidence 3568999999998 5565 667666542 47999999998873 2 2 499999
Q ss_pred eccccccCChHH--HHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCCCCCCCHHHHHHHHHhCCCcEEEEEe
Q 043585 209 FMLFFHAFGGED--SLKILKKCREAIAGNGQRGKVLIMDIVINEKEDEDQRTDKEWKTLFLDAGFTCCKITT 278 (287)
Q Consensus 209 l~~vlh~~~d~~--~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~~~rt~~e~~~ll~~aGf~~~~~~~ 278 (287)
+--..+..+.+. ...+++.++++|+| ||.+++... .+. .......+..+.++++ |..+..+.
T Consensus 154 ~d~~~~~~~~~~l~~~~~~~~~~~~L~p---gG~lv~~~~-~~~---~~~~~~~~~~~~l~~~-F~~v~~~~ 217 (275)
T 1iy9_A 154 VDSTEPVGPAVNLFTKGFYAGIAKALKE---DGIFVAQTD-NPW---FTPELITNVQRDVKEI-FPITKLYT 217 (275)
T ss_dssp ESCSSCCSCCCCCSTTHHHHHHHHHEEE---EEEEEEECC-CTT---TCHHHHHHHHHHHHTT-CSEEEEEE
T ss_pred ECCCCCCCcchhhhHHHHHHHHHHhcCC---CcEEEEEcC-Ccc---ccHHHHHHHHHHHHHh-CCCeEEEE
Confidence 854433322111 14689999999999 888777521 110 0122345666677777 87776664
No 183
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=97.65 E-value=6.1e-06 Score=74.54 Aligned_cols=111 Identities=11% Similarity=0.137 Sum_probs=56.3
Q ss_pred cccCcceEEEecCcc------------------cccc-hhhhhcCCC-----------------CCCceeeeccCccc--
Q 043585 159 LIERLGSMVDVGGGN------------------VLDL-PHAVANTPQ-----------------TENLKYVADDMFQF-- 200 (287)
Q Consensus 159 ~~~~~~~vlDvGgG~------------------v~Dl-p~vi~~a~~-----------------~~Ri~~~~gd~~~~-- 200 (287)
+.....+|||||||+ .+|. |..++.+++ .+++++..+|+.+.
T Consensus 102 ~~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~~ 181 (336)
T 2b25_A 102 DINPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGATE 181 (336)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC-
T ss_pred CCCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHccc
Confidence 456678999999999 3454 555555442 26899999999873
Q ss_pred -CC--CCCeEEeccccccCChHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCC------------CC-----------CC
Q 043585 201 -IP--PADAYFFMLFFHAFGGEDSLKILKKCREAIAGNGQRGKVLIMDIVINE------------KE-----------DE 254 (287)
Q Consensus 201 -~p--~~D~~~l~~vlh~~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~------------~~-----------~~ 254 (287)
++ .+|+|++.. .+.| .+|+.+++.|+| ||++++....... .. ..
T Consensus 182 ~~~~~~fD~V~~~~-~~~~------~~l~~~~~~Lkp---gG~lv~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 251 (336)
T 2b25_A 182 DIKSLTFDAVALDM-LNPH------VTLPVFYPHLKH---GGVCAVYVVNITQVIELLDGIRTCELALSCEKISEVIVRD 251 (336)
T ss_dssp ------EEEEEECS-SSTT------TTHHHHGGGEEE---EEEEEEEESSHHHHHHHHHHHHHHTCCEEEEEEECCCCCC
T ss_pred ccCCCCeeEEEECC-CCHH------HHHHHHHHhcCC---CcEEEEEeCCHHHHHHHHHHHHhcCCCcccceEEEecccc
Confidence 33 389998732 2221 378999999999 9999987653221 00 00
Q ss_pred -----CCCCHHHHHHHHHhCCCcEEEEEec
Q 043585 255 -----DQRTDKEWKTLFLDAGFTCCKITTM 279 (287)
Q Consensus 255 -----~~rt~~e~~~ll~~aGf~~~~~~~~ 279 (287)
..+...+|...|+++||+.+++...
T Consensus 252 w~~~~~~~~~g~y~~~l~~aGF~~v~~~~~ 281 (336)
T 2b25_A 252 WLVCLAKQKNGILAQKVESKINTDVQLDSQ 281 (336)
T ss_dssp EEECC-------------------------
T ss_pred eEEEeecccccchhhhhccccccccccccc
Confidence 1122238999999999988776543
No 184
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=97.65 E-value=5e-05 Score=67.49 Aligned_cols=79 Identities=8% Similarity=-0.072 Sum_probs=56.7
Q ss_pred CCcee-eeccCcc-cCC-CCCeEEecccccc--------C-ChHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCCCC
Q 043585 188 ENLKY-VADDMFQ-FIP-PADAYFFMLFFHA--------F-GGEDSLKILKKCREAIAGNGQRGKVLIMDIVINEKEDED 255 (287)
Q Consensus 188 ~Ri~~-~~gd~~~-~~p-~~D~~~l~~vlh~--------~-~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~~ 255 (287)
+++++ +.+|+.+ +.+ .+|+|+.....+. . ..+....+|+.+++.|+| ||++++......
T Consensus 105 ~~v~~~i~gD~~~~~~~~~fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~Lkp---GG~~v~~~~~~~------ 175 (290)
T 2xyq_A 105 SDADSTLIGDCATVHTANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLAL---GGSIAVKITEHS------ 175 (290)
T ss_dssp CSSSEEEESCGGGCCCSSCEEEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEE---EEEEEEEECSSS------
T ss_pred CCCEEEEECccccCCccCcccEEEEcCCccccccccccccchHHHHHHHHHHHHHhcCC---CcEEEEEEeccC------
Confidence 47899 9999988 444 4999997432111 0 123355899999999999 999988643322
Q ss_pred CCCHHHHHHHHHhCCCcEEEEE
Q 043585 256 QRTDKEWKTLFLDAGFTCCKIT 277 (287)
Q Consensus 256 ~rt~~e~~~ll~~aGf~~~~~~ 277 (287)
..+++.+++++.||..+++.
T Consensus 176 --~~~~l~~~l~~~GF~~v~~~ 195 (290)
T 2xyq_A 176 --WNADLYKLMGHFSWWTAFVT 195 (290)
T ss_dssp --CCHHHHHHHTTEEEEEEEEE
T ss_pred --CHHHHHHHHHHcCCcEEEEE
Confidence 23589999999999877765
No 185
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=97.65 E-value=1.6e-05 Score=63.81 Aligned_cols=81 Identities=17% Similarity=0.178 Sum_probs=56.9
Q ss_pred CcceEEEecCcc---------------cccc-hhhhhcCCC-----CCCceeeeccCcccCC-------CCCeEEecccc
Q 043585 162 RLGSMVDVGGGN---------------VLDL-PHAVANTPQ-----TENLKYVADDMFQFIP-------PADAYFFMLFF 213 (287)
Q Consensus 162 ~~~~vlDvGgG~---------------v~Dl-p~vi~~a~~-----~~Ri~~~~gd~~~~~p-------~~D~~~l~~vl 213 (287)
...+|||+|||. .+|. |.+++.+++ .-+++++.+|+.+..+ .+|+|++...+
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~i~~~~~~ 120 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEGWEAVLVEKDPEAVRLLKENVRRTGLGARVVALPVEVFLPEAKAQGERFTVAFMAPPY 120 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHTCCCEEECSCHHHHHHHHHHTTCCEEEEEECCCT
T ss_pred CCCeEEEeCCCcCHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHHcCCceEEEeccHHHHHHhhhccCCceEEEEECCCC
Confidence 567999999999 5666 666766653 2289999999887322 49999999888
Q ss_pred ccCChHHHHHHHHHHHHHhcCCCCCcEEEEEeec
Q 043585 214 HAFGGEDSLKILKKCREAIAGNGQRGKVLIMDIV 247 (287)
Q Consensus 214 h~~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~ 247 (287)
| -..++..+.+.+ ++.|+| ||.+++....
T Consensus 121 ~-~~~~~~~~~~~~-~~~L~~---gG~~~~~~~~ 149 (171)
T 1ws6_A 121 A-MDLAALFGELLA-SGLVEA---GGLYVLQHPK 149 (171)
T ss_dssp T-SCTTHHHHHHHH-HTCEEE---EEEEEEEEET
T ss_pred c-hhHHHHHHHHHh-hcccCC---CcEEEEEeCC
Confidence 7 333333333333 489999 8888875543
No 186
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=97.64 E-value=3.2e-05 Score=68.36 Aligned_cols=110 Identities=13% Similarity=0.095 Sum_probs=71.6
Q ss_pred cCcceEEEecCcc-----------------cccc-hhhhhcCCC----------CCCceeeeccCccc---CC-CCCeEE
Q 043585 161 ERLGSMVDVGGGN-----------------VLDL-PHAVANTPQ----------TENLKYVADDMFQF---IP-PADAYF 208 (287)
Q Consensus 161 ~~~~~vlDvGgG~-----------------v~Dl-p~vi~~a~~----------~~Ri~~~~gd~~~~---~p-~~D~~~ 208 (287)
....+|||||||. .+|+ |.+++.+++ .+|++++.+|..+. .+ .||+|+
T Consensus 77 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 156 (283)
T 2i7c_A 77 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVII 156 (283)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEE
T ss_pred CCCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEEE
Confidence 4568999999998 4555 666666542 47899999998762 23 499999
Q ss_pred eccccccCChHHH--HHHHHHHHHHhcCCCCCcEEEEEeeccCCCCCCCCCCHHHHHHHHHhCCCcEEEEEe
Q 043585 209 FMLFFHAFGGEDS--LKILKKCREAIAGNGQRGKVLIMDIVINEKEDEDQRTDKEWKTLFLDAGFTCCKITT 278 (287)
Q Consensus 209 l~~vlh~~~d~~~--~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~~~rt~~e~~~ll~~aGf~~~~~~~ 278 (287)
+-...+.-+.+.. ..+++.++++|+| ||.+++.-...- ........+.+.+++. |..++.+.
T Consensus 157 ~d~~~~~~~~~~l~~~~~l~~~~~~L~p---gG~lv~~~~~~~----~~~~~~~~~~~~l~~~-F~~v~~~~ 220 (283)
T 2i7c_A 157 VDSSDPIGPAETLFNQNFYEKIYNALKP---NGYCVAQCESLW----IHVGTIKNMIGYAKKL-FKKVEYAN 220 (283)
T ss_dssp EECCCTTTGGGGGSSHHHHHHHHHHEEE---EEEEEEECCCTT----TCHHHHHHHHHHHHTT-CSEEEEEE
T ss_pred EcCCCCCCcchhhhHHHHHHHHHHhcCC---CcEEEEECCCcc----cCHHHHHHHHHHHHHH-CCceEEEE
Confidence 8544333222222 5899999999999 888877522100 0112244555666666 77766544
No 187
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=97.64 E-value=2.2e-05 Score=66.46 Aligned_cols=81 Identities=7% Similarity=0.122 Sum_probs=59.1
Q ss_pred ccCcceEEEecCcc------------------cccc-hhhhhcCCC-------CCCceeeeccCccc---C------CCC
Q 043585 160 IERLGSMVDVGGGN------------------VLDL-PHAVANTPQ-------TENLKYVADDMFQF---I------PPA 204 (287)
Q Consensus 160 ~~~~~~vlDvGgG~------------------v~Dl-p~vi~~a~~-------~~Ri~~~~gd~~~~---~------p~~ 204 (287)
..+..+|||||||. .+|. |..++.+++ .++++++.+|+.+. + ..+
T Consensus 67 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~~ 146 (229)
T 2avd_A 67 LIQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTF 146 (229)
T ss_dssp HTTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTCE
T ss_pred hcCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCCc
Confidence 35678999999998 3444 555555542 37899999998762 2 358
Q ss_pred CeEEeccccccCChHHHHHHHHHHHHHhcCCCCCcEEEEEeecc
Q 043585 205 DAYFFMLFFHAFGGEDSLKILKKCREAIAGNGQRGKVLIMDIVI 248 (287)
Q Consensus 205 D~~~l~~vlh~~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~ 248 (287)
|+|++... ......+++++.+.|+| ||.+++.+...
T Consensus 147 D~v~~d~~-----~~~~~~~l~~~~~~L~p---gG~lv~~~~~~ 182 (229)
T 2avd_A 147 DVAVVDAD-----KENCSAYYERCLQLLRP---GGILAVLRVLW 182 (229)
T ss_dssp EEEEECSC-----STTHHHHHHHHHHHEEE---EEEEEEECCSG
T ss_pred cEEEECCC-----HHHHHHHHHHHHHHcCC---CeEEEEECCCc
Confidence 99988432 44556899999999999 88888877654
No 188
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=97.64 E-value=5.6e-05 Score=66.79 Aligned_cols=104 Identities=12% Similarity=0.080 Sum_probs=75.7
Q ss_pred ccCcceEEEecCcc----------------cccc-hhhhhcCCC-------CCCceeeeccCcccCC--CCCeEEecccc
Q 043585 160 IERLGSMVDVGGGN----------------VLDL-PHAVANTPQ-------TENLKYVADDMFQFIP--PADAYFFMLFF 213 (287)
Q Consensus 160 ~~~~~~vlDvGgG~----------------v~Dl-p~vi~~a~~-------~~Ri~~~~gd~~~~~p--~~D~~~l~~vl 213 (287)
.....+|||+|||. .+|+ |..++.+++ .++|++..+|.++-.+ .+|.|+|.-.
T Consensus 123 ~~~g~~VlD~~aG~G~~~i~~a~~g~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~~~~~~D~Vi~~~p- 201 (278)
T 3k6r_A 123 AKPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPGENIADRILMGYV- 201 (278)
T ss_dssp CCTTCEEEETTCTTTTTTHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCCCSCEEEEEECCC-
T ss_pred cCCCCEEEEecCcCcHHHHHHHHhcCCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhccccCCCEEEECCC-
Confidence 35678999999999 4665 555555542 7899999999988333 4898887532
Q ss_pred ccCChHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCCCCCCCHHHHHHHHHhCCCcEE
Q 043585 214 HAFGGEDSLKILKKCREAIAGNGQRGKVLIMDIVINEKEDEDQRTDKEWKTLFLDAGFTCC 274 (287)
Q Consensus 214 h~~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~~~rt~~e~~~ll~~aGf~~~ 274 (287)
..+...|..+.+.|++ ||.|.+++.+-.+.. .....+.++++.++.|+++.
T Consensus 202 -----~~~~~~l~~a~~~lk~---gG~ih~~~~~~e~~~--~~~~~e~i~~~~~~~g~~v~ 252 (278)
T 3k6r_A 202 -----VRTHEFIPKALSIAKD---GAIIHYHNTVPEKLM--PREPFETFKRITKEYGYDVE 252 (278)
T ss_dssp -----SSGGGGHHHHHHHEEE---EEEEEEEEEEEGGGT--TTTTHHHHHHHHHHTTCEEE
T ss_pred -----CcHHHHHHHHHHHcCC---CCEEEEEeeeccccc--chhHHHHHHHHHHHcCCcEE
Confidence 1234678888899999 898888877654322 34457788999999999764
No 189
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=97.63 E-value=2.7e-05 Score=70.09 Aligned_cols=107 Identities=17% Similarity=0.227 Sum_probs=71.8
Q ss_pred cceEEEecCcc-----------------cccc-hhhhhcCCC------CCCceeeeccCccc---CC--CCCeEEecccc
Q 043585 163 LGSMVDVGGGN-----------------VLDL-PHAVANTPQ------TENLKYVADDMFQF---IP--PADAYFFMLFF 213 (287)
Q Consensus 163 ~~~vlDvGgG~-----------------v~Dl-p~vi~~a~~------~~Ri~~~~gd~~~~---~p--~~D~~~l~~vl 213 (287)
..+|||||||. ++|+ |.+++.+++ .+|++++.+|..+- .+ .||+|++-...
T Consensus 90 ~~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~~ 169 (317)
T 3gjy_A 90 KLRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMVAESFTPASRDVIIRDVFA 169 (317)
T ss_dssp GCEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHHHTCCTTCEEEEEECCST
T ss_pred CCEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHHHhhccCCCCCEEEECCCC
Confidence 34999999998 5665 777777753 57999999998762 33 49999986554
Q ss_pred ccCChHHH--HHHHHHHHHHhcCCCCCcEEEEEeeccCCCCCCCCCCHHHHHHHHHhCCCcEEEEEe
Q 043585 214 HAFGGEDS--LKILKKCREAIAGNGQRGKVLIMDIVINEKEDEDQRTDKEWKTLFLDAGFTCCKITT 278 (287)
Q Consensus 214 h~~~d~~~--~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~~~rt~~e~~~ll~~aGf~~~~~~~ 278 (287)
|....... ..+++.+++.|+| ||.+++.-. -.. .......+.+.|+++ |..+.++.
T Consensus 170 ~~~~~~~L~t~efl~~~~r~Lkp---gGvlv~~~~-~~~----~~~~~~~~~~tL~~v-F~~v~~~~ 227 (317)
T 3gjy_A 170 GAITPQNFTTVEFFEHCHRGLAP---GGLYVANCG-DHS----DLRGAKSELAGMMEV-FEHVAVIA 227 (317)
T ss_dssp TSCCCGGGSBHHHHHHHHHHEEE---EEEEEEEEE-ECT----TCHHHHHHHHHHHHH-CSEEEEEE
T ss_pred ccccchhhhHHHHHHHHHHhcCC---CcEEEEEec-CCc----chHHHHHHHHHHHHH-CCceEEEE
Confidence 43322211 5799999999999 888776543 111 112234555666666 77776664
No 190
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=97.62 E-value=1e-06 Score=75.50 Aligned_cols=114 Identities=12% Similarity=0.140 Sum_probs=80.7
Q ss_pred CcceEEEecCcc---------------cccc-hhhhhcCCC-------CCCceeeeccCcccCC--CCCeEEeccccccC
Q 043585 162 RLGSMVDVGGGN---------------VLDL-PHAVANTPQ-------TENLKYVADDMFQFIP--PADAYFFMLFFHAF 216 (287)
Q Consensus 162 ~~~~vlDvGgG~---------------v~Dl-p~vi~~a~~-------~~Ri~~~~gd~~~~~p--~~D~~~l~~vlh~~ 216 (287)
...+|||+|||. .+|+ |.+++.+++ .++++++.+|+.+..+ .+|+|++...+|..
T Consensus 78 ~~~~vLD~gcG~G~~~~~la~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~~~~~ 157 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFALTGMRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLASFLKADVVFLSPPWGGP 157 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHGGGCCCSEEEECCCCSSG
T ss_pred CCCEEEECccccCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhcccCCCCEEEECCCcCCc
Confidence 568999999999 5676 666776653 2589999999988323 59999999999987
Q ss_pred ChHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCC-----CCCCCHHHHHHHHHhCCCcEEEEEecCC
Q 043585 217 GGEDSLKILKKCREAIAGNGQRGKVLIMDIVINEKED-----EDQRTDKEWKTLFLDAGFTCCKITTMFG 281 (287)
Q Consensus 217 ~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~-----~~~rt~~e~~~ll~~aGf~~~~~~~~~~ 281 (287)
.+.. ..+.++++.|+| ||.+++ +........ ++....+++..++...|...+......+
T Consensus 158 ~~~~--~~~~~~~~~L~p---gG~~i~-~~~~~~~~~~~~~lp~~~~~~~~~~~l~~~g~~~i~~~~~~~ 221 (241)
T 3gdh_A 158 DYAT--AETFDIRTMMSP---DGFEIF-RLSKKITNNIVYFLPRNADIDQVASLAGPGGQVEIEQNFLNN 221 (241)
T ss_dssp GGGG--SSSBCTTTSCSS---CHHHHH-HHHHHHCSCEEEEEETTBCHHHHHHTTCTTCCEEEEEEEETT
T ss_pred chhh--hHHHHHHhhcCC---cceeHH-HHHHhhCCceEEECCCCCCHHHHHHHhccCCCEEEEehhhcC
Confidence 7654 366788899999 888444 432111111 1555788999999888876655544433
No 191
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=97.62 E-value=1.5e-05 Score=66.71 Aligned_cols=80 Identities=15% Similarity=0.224 Sum_probs=58.4
Q ss_pred CcceEEEecCcc----------------cccc-hhhhhcCCC------C--CCceeeeccCcccC-----CC-CCeEEec
Q 043585 162 RLGSMVDVGGGN----------------VLDL-PHAVANTPQ------T--ENLKYVADDMFQFI-----PP-ADAYFFM 210 (287)
Q Consensus 162 ~~~~vlDvGgG~----------------v~Dl-p~vi~~a~~------~--~Ri~~~~gd~~~~~-----p~-~D~~~l~ 210 (287)
...+|||+|||. .+|. |.+++.+++ . ++++++.+|+.+.. .. +|+|++.
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~ 132 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSRQAKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVFLD 132 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCCSSCCEEEEEEC
T ss_pred CCCeEEEcCCccCHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhccCCCCCEEEEC
Confidence 457999999999 5665 566666653 2 68999999987732 25 8999998
Q ss_pred cccccCChHHHHHHHHHH--HHHhcCCCCCcEEEEEeec
Q 043585 211 LFFHAFGGEDSLKILKKC--REAIAGNGQRGKVLIMDIV 247 (287)
Q Consensus 211 ~vlh~~~d~~~~~iL~~~--~~al~~~~~~g~lli~e~~ 247 (287)
..+| .. +...+++.+ .+.|+| ||.+++....
T Consensus 133 ~~~~-~~--~~~~~l~~~~~~~~Lkp---gG~l~i~~~~ 165 (201)
T 2ift_A 133 PPFH-FN--LAEQAISLLCENNWLKP---NALIYVETEK 165 (201)
T ss_dssp CCSS-SC--HHHHHHHHHHHTTCEEE---EEEEEEEEES
T ss_pred CCCC-Cc--cHHHHHHHHHhcCccCC---CcEEEEEECC
Confidence 8866 33 345778888 446999 8888876543
No 192
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=97.61 E-value=4.4e-05 Score=70.33 Aligned_cols=78 Identities=14% Similarity=0.159 Sum_probs=56.3
Q ss_pred CcceEEEecCcc----------------cccchhhhhcCCC-------CCCceeeeccCcc-cCC-CCCeEEeccccccC
Q 043585 162 RLGSMVDVGGGN----------------VLDLPHAVANTPQ-------TENLKYVADDMFQ-FIP-PADAYFFMLFFHAF 216 (287)
Q Consensus 162 ~~~~vlDvGgG~----------------v~Dlp~vi~~a~~-------~~Ri~~~~gd~~~-~~p-~~D~~~l~~vlh~~ 216 (287)
+.++|||||||+ .+|..++++.|++ .++|+++.+|+.+ .+| .+|+|+.-++-+..
T Consensus 83 ~~k~VLDvG~GtGiLs~~Aa~aGA~~V~ave~s~~~~~a~~~~~~n~~~~~i~~i~~~~~~~~lpe~~DvivsE~~~~~l 162 (376)
T 4hc4_A 83 RGKTVLDVGAGTGILSIFCAQAGARRVYAVEASAIWQQAREVVRFNGLEDRVHVLPGPVETVELPEQVDAIVSEWMGYGL 162 (376)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCSEEEEEECSTTHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSCEEEEECCCCBTTB
T ss_pred CCCEEEEeCCCccHHHHHHHHhCCCEEEEEeChHHHHHHHHHHHHcCCCceEEEEeeeeeeecCCccccEEEeecccccc
Confidence 457899999999 4555445555542 7899999999988 677 49999875443333
Q ss_pred C-hHHHHHHHHHHHHHhcCCCCCcEEE
Q 043585 217 G-GEDSLKILKKCREAIAGNGQRGKVL 242 (287)
Q Consensus 217 ~-d~~~~~iL~~~~~al~~~~~~g~ll 242 (287)
. +.....++....+.|+| ||.++
T Consensus 163 ~~e~~l~~~l~a~~r~Lkp---~G~~i 186 (376)
T 4hc4_A 163 LHESMLSSVLHARTKWLKE---GGLLL 186 (376)
T ss_dssp TTTCSHHHHHHHHHHHEEE---EEEEE
T ss_pred cccchhhhHHHHHHhhCCC---CceEC
Confidence 2 22456788888899999 88765
No 193
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=97.61 E-value=9.6e-05 Score=66.11 Aligned_cols=81 Identities=15% Similarity=0.188 Sum_probs=54.7
Q ss_pred ccCcceEEEecCcc--------------cccc-----hhhhhcCCC----CCCceeeec-cCcc-cCCCCCeEEeccccc
Q 043585 160 IERLGSMVDVGGGN--------------VLDL-----PHAVANTPQ----TENLKYVAD-DMFQ-FIPPADAYFFMLFFH 214 (287)
Q Consensus 160 ~~~~~~vlDvGgG~--------------v~Dl-----p~vi~~a~~----~~Ri~~~~g-d~~~-~~p~~D~~~l~~vlh 214 (287)
+....+|||||||. .+|. +..++.... .++|+++.+ |+.. +...+|+|++...++
T Consensus 80 ~~~g~~VLDlGcG~G~~s~~la~~~~V~gvD~~~~~~~~~~~~~~~~~~~~~~v~~~~~~D~~~l~~~~fD~V~sd~~~~ 159 (305)
T 2p41_A 80 VTPEGKVVDLGCGRGGWSYYCGGLKNVREVKGLTKGGPGHEEPIPMSTYGWNLVRLQSGVDVFFIPPERCDTLLCDIGES 159 (305)
T ss_dssp SCCCEEEEEETCTTSHHHHHHHTSTTEEEEEEECCCSTTSCCCCCCCSTTGGGEEEECSCCTTTSCCCCCSEEEECCCCC
T ss_pred CCCCCEEEEEcCCCCHHHHHHHhcCCEEEEeccccCchhHHHHHHhhhcCCCCeEEEeccccccCCcCCCCEEEECCccc
Confidence 45568999999998 3555 332322221 267999999 9987 333599999866543
Q ss_pred ---cCChHH-HHHHHHHHHHHhcCCCCCcEEEE
Q 043585 215 ---AFGGED-SLKILKKCREAIAGNGQRGKVLI 243 (287)
Q Consensus 215 ---~~~d~~-~~~iL~~~~~al~~~~~~g~lli 243 (287)
...|+. ...+|+.+++.|+| ||.+++
T Consensus 160 ~g~~~~d~~~~l~~L~~~~~~Lkp---GG~~v~ 189 (305)
T 2p41_A 160 SPNPTVEAGRTLRVLNLVENWLSN---NTQFCV 189 (305)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHCCT---TCEEEE
T ss_pred cCcchhhHHHHHHHHHHHHHHhCC---CCEEEE
Confidence 222322 23688999999999 897776
No 194
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=97.59 E-value=9.2e-05 Score=65.29 Aligned_cols=110 Identities=13% Similarity=0.081 Sum_probs=68.7
Q ss_pred cCcceEEEecCcc----------------cccc-hhhhhcCC----------------CCCCceeeeccCcccC--C-CC
Q 043585 161 ERLGSMVDVGGGN----------------VLDL-PHAVANTP----------------QTENLKYVADDMFQFI--P-PA 204 (287)
Q Consensus 161 ~~~~~vlDvGgG~----------------v~Dl-p~vi~~a~----------------~~~Ri~~~~gd~~~~~--p-~~ 204 (287)
....+|||||||. .+|+ |.+++.++ ..+|++++.+|..+.. + .|
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~~~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~~~~f 153 (281)
T 1mjf_A 74 PKPKRVLVIGGGDGGTVREVLQHDVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEFIKNNRGF 153 (281)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSCCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHHHHHCCCE
T ss_pred CCCCeEEEEcCCcCHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEECchHHHhcccCCe
Confidence 3467999999998 4555 56665543 2468999999986621 3 59
Q ss_pred CeEEeccccccCChHH--HHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCCCCCCCHHHHHHHHHhCCCcEEEEEe
Q 043585 205 DAYFFMLFFHAFGGED--SLKILKKCREAIAGNGQRGKVLIMDIVINEKEDEDQRTDKEWKTLFLDAGFTCCKITT 278 (287)
Q Consensus 205 D~~~l~~vlh~~~d~~--~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~~~rt~~e~~~ll~~aGf~~~~~~~ 278 (287)
|+|++....|..+.+. ...+++++++.|+| ||.+++.....-. .......+.+.+++. |..+..+.
T Consensus 154 D~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~p---gG~lv~~~~~~~~----~~~~~~~~~~~l~~~-f~~v~~~~ 221 (281)
T 1mjf_A 154 DVIIADSTDPVGPAKVLFSEEFYRYVYDALNN---PGIYVTQAGSVYL----FTDELISAYKEMKKV-FDRVYYYS 221 (281)
T ss_dssp EEEEEECCCCC-----TTSHHHHHHHHHHEEE---EEEEEEEEEETTT----SHHHHHHHHHHHHHH-CSEEEEEE
T ss_pred eEEEECCCCCCCcchhhhHHHHHHHHHHhcCC---CcEEEEEcCCccc----CHHHHHHHHHHHHHH-CCceEEEE
Confidence 9999865543322222 25789999999999 8888775322110 112234455555555 77666554
No 195
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=97.58 E-value=0.00025 Score=58.47 Aligned_cols=106 Identities=12% Similarity=0.122 Sum_probs=67.9
Q ss_pred ccCcceEEEecCccc------ccc-h----hh--hhcCC--CCCCceeeeccCccc------------------------
Q 043585 160 IERLGSMVDVGGGNV------LDL-P----HA--VANTP--QTENLKYVADDMFQF------------------------ 200 (287)
Q Consensus 160 ~~~~~~vlDvGgG~v------~Dl-p----~v--i~~a~--~~~Ri~~~~gd~~~~------------------------ 200 (287)
+....+|||||||+. ... | .| ++... ..++++++.+|+.+.
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~~~~~v~~~~~d~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 99 (201)
T 2plw_A 20 LKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMDPIPNVYFIQGEIGKDNMNNIKNINYIDNMNNNSVDYKLK 99 (201)
T ss_dssp CCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCCCCTTCEEEECCTTTTSSCCC-----------CHHHHHHH
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccCCCCCceEEEccccchhhhhhccccccccccchhhHHHHH
Confidence 456679999999991 111 1 11 11111 145799999999873
Q ss_pred --CC--CCCeEEeccccccC----ChHH-----HHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCCCCCCCHHHHHHHHH
Q 043585 201 --IP--PADAYFFMLFFHAF----GGED-----SLKILKKCREAIAGNGQRGKVLIMDIVINEKEDEDQRTDKEWKTLFL 267 (287)
Q Consensus 201 --~p--~~D~~~l~~vlh~~----~d~~-----~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~~~rt~~e~~~ll~ 267 (287)
++ .+|+|+....+|.. .+.. ...+|+.+++.|+| ||++++.... . .+..++...++
T Consensus 100 ~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~Lkp---gG~lv~~~~~-~-------~~~~~l~~~l~ 168 (201)
T 2plw_A 100 EILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINI---GGTYIVKMYL-G-------SQTNNLKTYLK 168 (201)
T ss_dssp HHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEEEEEC-S-------TTHHHHHHHHH
T ss_pred hhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccC---CCEEEEEEeC-C-------CCHHHHHHHHH
Confidence 34 48999988777653 1211 23589999999999 8988874321 1 23567777776
Q ss_pred hCCCcEEEEE
Q 043585 268 DAGFTCCKIT 277 (287)
Q Consensus 268 ~aGf~~~~~~ 277 (287)
. .|..+++.
T Consensus 169 ~-~f~~v~~~ 177 (201)
T 2plw_A 169 G-MFQLVHTT 177 (201)
T ss_dssp T-TEEEEEEC
T ss_pred H-HHheEEEE
Confidence 6 47766654
No 196
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=97.57 E-value=6.4e-05 Score=69.60 Aligned_cols=79 Identities=14% Similarity=0.067 Sum_probs=58.6
Q ss_pred cCcceEEEecCc------c------------------cccchhhhhcCCCCCCceeeeccCcc-cCC--------CCCeE
Q 043585 161 ERLGSMVDVGGG------N------------------VLDLPHAVANTPQTENLKYVADDMFQ-FIP--------PADAY 207 (287)
Q Consensus 161 ~~~~~vlDvGgG------~------------------v~Dlp~vi~~a~~~~Ri~~~~gd~~~-~~p--------~~D~~ 207 (287)
.+..+||||||| . .+|+.+.. ....+||+|+.+|+.+ +++ .||+|
T Consensus 215 ~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m--~~~~~rI~fv~GDa~dlpf~~~l~~~d~sFDlV 292 (419)
T 3sso_A 215 NQQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKS--HVDELRIRTIQGDQNDAEFLDRIARRYGPFDIV 292 (419)
T ss_dssp TSCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCG--GGCBTTEEEEECCTTCHHHHHHHHHHHCCEEEE
T ss_pred CCCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHH--hhcCCCcEEEEecccccchhhhhhcccCCccEE
Confidence 356899999999 3 34542211 1136799999999987 432 49999
Q ss_pred EeccccccCChHHHHHHHHHHHHHhcCCCCCcEEEEEeec
Q 043585 208 FFMLFFHAFGGEDSLKILKKCREAIAGNGQRGKVLIMDIV 247 (287)
Q Consensus 208 ~l~~vlh~~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~ 247 (287)
+.. ..|.+. +..+.|+++++.|+| ||.+++.|..
T Consensus 293 isd-gsH~~~--d~~~aL~el~rvLKP---GGvlVi~Dl~ 326 (419)
T 3sso_A 293 IDD-GSHINA--HVRTSFAALFPHVRP---GGLYVIEDMW 326 (419)
T ss_dssp EEC-SCCCHH--HHHHHHHHHGGGEEE---EEEEEEECGG
T ss_pred EEC-Ccccch--hHHHHHHHHHHhcCC---CeEEEEEecc
Confidence 865 567664 457899999999999 8999988876
No 197
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=97.56 E-value=3.1e-05 Score=65.81 Aligned_cols=80 Identities=11% Similarity=0.168 Sum_probs=56.0
Q ss_pred CcceEEEecCcc-----------------cccc-hhhhhcCCC------CCCceeeeccCccc----CC--CCCeEEecc
Q 043585 162 RLGSMVDVGGGN-----------------VLDL-PHAVANTPQ------TENLKYVADDMFQF----IP--PADAYFFML 211 (287)
Q Consensus 162 ~~~~vlDvGgG~-----------------v~Dl-p~vi~~a~~------~~Ri~~~~gd~~~~----~p--~~D~~~l~~ 211 (287)
...+|||||||. .+|. +..++.+++ .++++++.+|+.+. ++ .+|.|++..
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~~~~~~~d~v~~~~ 113 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQLFF 113 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHHSCTTCEEEEEEES
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHcCCCChheEEEeC
Confidence 567999999999 4565 555655542 46799999998762 44 389888763
Q ss_pred ccccCChH-HH------HHHHHHHHHHhcCCCCCcEEEEEe
Q 043585 212 FFHAFGGE-DS------LKILKKCREAIAGNGQRGKVLIMD 245 (287)
Q Consensus 212 vlh~~~d~-~~------~~iL~~~~~al~~~~~~g~lli~e 245 (287)
... |... .. ..+|+.+++.|+| ||.+++..
T Consensus 114 ~~p-~~~~~~~~rr~~~~~~l~~~~r~Lkp---GG~l~i~t 150 (218)
T 3dxy_A 114 PDP-WHKARHNKRRIVQVPFAELVKSKLQL---GGVFHMAT 150 (218)
T ss_dssp CCC-CCSGGGGGGSSCSHHHHHHHHHHEEE---EEEEEEEE
T ss_pred CCC-ccchhhhhhhhhhHHHHHHHHHHcCC---CcEEEEEe
Confidence 332 2221 11 2499999999999 89988764
No 198
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=97.56 E-value=6.6e-05 Score=65.10 Aligned_cols=76 Identities=13% Similarity=0.165 Sum_probs=56.6
Q ss_pred cCcceEEEecCcc-----------------cccc-hhhhhcCCC-CCCceeeeccCcc-cCC--CCCeEEeccccccCCh
Q 043585 161 ERLGSMVDVGGGN-----------------VLDL-PHAVANTPQ-TENLKYVADDMFQ-FIP--PADAYFFMLFFHAFGG 218 (287)
Q Consensus 161 ~~~~~vlDvGgG~-----------------v~Dl-p~vi~~a~~-~~Ri~~~~gd~~~-~~p--~~D~~~l~~vlh~~~d 218 (287)
....+|||||||. .+|. +..++.+++ ..++.+..+|+.. +++ .+|+|+...+.
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~~----- 158 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRYPQVTFCVASSHRLPFSDTSMDAIIRIYAP----- 158 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHCTTSEEEECCTTSCSBCTTCEEEEEEESCC-----
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhCCCcEEEEcchhhCCCCCCceeEEEEeCCh-----
Confidence 4567999999998 3443 444555443 5678999999877 554 49999986553
Q ss_pred HHHHHHHHHHHHHhcCCCCCcEEEEEeecc
Q 043585 219 EDSLKILKKCREAIAGNGQRGKVLIMDIVI 248 (287)
Q Consensus 219 ~~~~~iL~~~~~al~~~~~~g~lli~e~~~ 248 (287)
..++++++.|+| ||++++.++..
T Consensus 159 ----~~l~~~~~~L~p---gG~l~~~~~~~ 181 (269)
T 1p91_A 159 ----CKAEELARVVKP---GGWVITATPGP 181 (269)
T ss_dssp ----CCHHHHHHHEEE---EEEEEEEEECT
T ss_pred ----hhHHHHHHhcCC---CcEEEEEEcCH
Confidence 257999999999 99999987654
No 199
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=97.55 E-value=0.00012 Score=60.74 Aligned_cols=104 Identities=12% Similarity=0.257 Sum_probs=68.0
Q ss_pred ccCcceEEEecCcc---------------cccchhhhhcCCCCCCceeeeccCcccC--------------CCCCeEEec
Q 043585 160 IERLGSMVDVGGGN---------------VLDLPHAVANTPQTENLKYVADDMFQFI--------------PPADAYFFM 210 (287)
Q Consensus 160 ~~~~~~vlDvGgG~---------------v~Dlp~vi~~a~~~~Ri~~~~gd~~~~~--------------p~~D~~~l~ 210 (287)
+.+..+|||+|||. .+|+.+. ...++++++.+|+.+.. ..+|+|+..
T Consensus 23 ~~~g~~VLDlG~G~G~~s~~la~~~~~V~gvD~~~~----~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~D~Vlsd 98 (191)
T 3dou_A 23 VRKGDAVIEIGSSPGGWTQVLNSLARKIISIDLQEM----EEIAGVRFIRCDIFKETIFDDIDRALREEGIEKVDDVVSD 98 (191)
T ss_dssp SCTTCEEEEESCTTCHHHHHHTTTCSEEEEEESSCC----CCCTTCEEEECCTTSSSHHHHHHHHHHHHTCSSEEEEEEC
T ss_pred CCCCCEEEEEeecCCHHHHHHHHcCCcEEEEecccc----ccCCCeEEEEccccCHHHHHHHHHHhhcccCCcceEEecC
Confidence 45678999999998 3444221 12468999999998731 358999874
Q ss_pred cccc---cC------ChHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCCCCCCCHHHHHHHHHhCCCcEEEEEec
Q 043585 211 LFFH---AF------GGEDSLKILKKCREAIAGNGQRGKVLIMDIVINEKEDEDQRTDKEWKTLFLDAGFTCCKITTM 279 (287)
Q Consensus 211 ~vlh---~~------~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~~~rt~~e~~~ll~~aGf~~~~~~~~ 279 (287)
-... .+ .-+.+..+|+.+.+.|+| ||++++...--+ ...++...++. .|+.+++...
T Consensus 99 ~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~Lkp---GG~lv~k~~~~~--------~~~~~~~~l~~-~F~~v~~~kP 164 (191)
T 3dou_A 99 AMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRN---GGNVLLKQFQGD--------MTNDFIAIWRK-NFSSYKISKP 164 (191)
T ss_dssp CCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEEEEECST--------HHHHHHHHHGG-GEEEEEEECC
T ss_pred CCcCCCCCcccCHHHHHHHHHHHHHHHHHHccC---CCEEEEEEcCCC--------CHHHHHHHHHH-hcCEEEEECC
Confidence 3211 11 113356789999999999 899886543221 24577777755 4887776543
No 200
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=97.54 E-value=5.7e-05 Score=68.05 Aligned_cols=109 Identities=14% Similarity=0.133 Sum_probs=69.9
Q ss_pred cCcceEEEecCcc-----------------cccc-hhhhhcCCC----------CCCceeeeccCccc---CC-CCCeEE
Q 043585 161 ERLGSMVDVGGGN-----------------VLDL-PHAVANTPQ----------TENLKYVADDMFQF---IP-PADAYF 208 (287)
Q Consensus 161 ~~~~~vlDvGgG~-----------------v~Dl-p~vi~~a~~----------~~Ri~~~~gd~~~~---~p-~~D~~~ 208 (287)
....+|||||||. .+|+ |.+++.+++ .+|++++.+|..+. .+ .||+|+
T Consensus 115 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi 194 (321)
T 2pt6_A 115 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVII 194 (321)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEE
T ss_pred CCCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEEE
Confidence 3467999999998 4555 666666542 46899999998773 23 499999
Q ss_pred eccccccCCh-HHH--HHHHHHHHHHhcCCCCCcEEEEEeeccCCCCCCCCCCHHHHHHHHHhCCCcEEEEEe
Q 043585 209 FMLFFHAFGG-EDS--LKILKKCREAIAGNGQRGKVLIMDIVINEKEDEDQRTDKEWKTLFLDAGFTCCKITT 278 (287)
Q Consensus 209 l~~vlh~~~d-~~~--~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~~~rt~~e~~~ll~~aGf~~~~~~~ 278 (287)
+... +.+.. +.. ..+++++++.|+| ||.+++... .+. .......++.+.+++. |..++.+.
T Consensus 195 ~d~~-~p~~~~~~l~~~~~l~~~~~~Lkp---gG~lv~~~~-~~~---~~~~~~~~~~~~l~~~-F~~v~~~~ 258 (321)
T 2pt6_A 195 VDSS-DPIGPAETLFNQNFYEKIYNALKP---NGYCVAQCE-SLW---IHVGTIKNMIGYAKKL-FKKVEYAN 258 (321)
T ss_dssp EECC-CSSSGGGGGSSHHHHHHHHHHEEE---EEEEEEEEC-CTT---TCHHHHHHHHHHHHTT-CSEEEEEE
T ss_pred ECCc-CCCCcchhhhHHHHHHHHHHhcCC---CcEEEEEcC-Ccc---cCHHHHHHHHHHHHHH-CCCeEEEE
Confidence 7543 22221 211 5899999999999 888877521 110 0112344555566666 76666554
No 201
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=97.53 E-value=1e-05 Score=65.72 Aligned_cols=83 Identities=11% Similarity=0.080 Sum_probs=58.5
Q ss_pred ccCcceEEEecCcc----------------cccc-hhhhhcCCC-------CCCceeeeccCccc---CC-CCCeEEecc
Q 043585 160 IERLGSMVDVGGGN----------------VLDL-PHAVANTPQ-------TENLKYVADDMFQF---IP-PADAYFFML 211 (287)
Q Consensus 160 ~~~~~~vlDvGgG~----------------v~Dl-p~vi~~a~~-------~~Ri~~~~gd~~~~---~p-~~D~~~l~~ 211 (287)
.....+|||+|||. .+|. |.+++.+++ .++++++.+|+.+. .+ .+|+|++..
T Consensus 29 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~i~~~~ 108 (177)
T 2esr_A 29 YFNGGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDCLTGRFDLVFLDP 108 (177)
T ss_dssp CCCSCEEEEETCTTCHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHBCSCEEEEEECC
T ss_pred hcCCCeEEEeCCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHhhcCCCCEEEECC
Confidence 34567999999999 5666 666666653 25799999999873 22 499999987
Q ss_pred ccccCChHHHHHHHHHHH--HHhcCCCCCcEEEEEeecc
Q 043585 212 FFHAFGGEDSLKILKKCR--EAIAGNGQRGKVLIMDIVI 248 (287)
Q Consensus 212 vlh~~~d~~~~~iL~~~~--~al~~~~~~g~lli~e~~~ 248 (287)
.+|. .....+++.+. +.|+| ||.+++.....
T Consensus 109 ~~~~---~~~~~~~~~l~~~~~L~~---gG~l~~~~~~~ 141 (177)
T 2esr_A 109 PYAK---ETIVATIEALAAKNLLSE---QVMVVCETDKT 141 (177)
T ss_dssp SSHH---HHHHHHHHHHHHTTCEEE---EEEEEEEEETT
T ss_pred CCCc---chHHHHHHHHHhCCCcCC---CcEEEEEECCc
Confidence 7653 22345566665 88999 88888765443
No 202
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=97.52 E-value=2.1e-05 Score=64.12 Aligned_cols=81 Identities=12% Similarity=0.052 Sum_probs=58.0
Q ss_pred cCcceEEEecCcc----------------cccc-hhhhhcCCC-------CCCceeeeccCcccC------C-CCCeEEe
Q 043585 161 ERLGSMVDVGGGN----------------VLDL-PHAVANTPQ-------TENLKYVADDMFQFI------P-PADAYFF 209 (287)
Q Consensus 161 ~~~~~vlDvGgG~----------------v~Dl-p~vi~~a~~-------~~Ri~~~~gd~~~~~------p-~~D~~~l 209 (287)
....+|||+|||. .+|. |.+++.+++ .++++++.+|+.+.. + .+|+|++
T Consensus 43 ~~~~~vLD~GcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~~ 122 (187)
T 2fhp_A 43 FDGGMALDLYSGSGGLAIEAVSRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQFYEEKLQFDLVLL 122 (187)
T ss_dssp CSSCEEEETTCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred cCCCCEEEeCCccCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHHHhcCCCCCEEEE
Confidence 3567999999999 5665 666666653 368999999998731 2 4999999
Q ss_pred ccccccCChHHHHHHHHHH--HHHhcCCCCCcEEEEEeec
Q 043585 210 MLFFHAFGGEDSLKILKKC--REAIAGNGQRGKVLIMDIV 247 (287)
Q Consensus 210 ~~vlh~~~d~~~~~iL~~~--~~al~~~~~~g~lli~e~~ 247 (287)
...+|....++ +++.+ ++.|+| ||.+++....
T Consensus 123 ~~~~~~~~~~~---~~~~l~~~~~L~~---gG~l~~~~~~ 156 (187)
T 2fhp_A 123 DPPYAKQEIVS---QLEKMLERQLLTN---EAVIVCETDK 156 (187)
T ss_dssp CCCGGGCCHHH---HHHHHHHTTCEEE---EEEEEEEEET
T ss_pred CCCCCchhHHH---HHHHHHHhcccCC---CCEEEEEeCC
Confidence 88876444444 44444 677999 8888876543
No 203
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=97.50 E-value=6.9e-05 Score=67.14 Aligned_cols=77 Identities=17% Similarity=0.307 Sum_probs=57.7
Q ss_pred cccCcceEEEecCcc------------------cccc-hhhhhcCCC------CCCceeeeccCcccCC---CCCeEEec
Q 043585 159 LIERLGSMVDVGGGN------------------VLDL-PHAVANTPQ------TENLKYVADDMFQFIP---PADAYFFM 210 (287)
Q Consensus 159 ~~~~~~~vlDvGgG~------------------v~Dl-p~vi~~a~~------~~Ri~~~~gd~~~~~p---~~D~~~l~ 210 (287)
......+|||||||. .+|+ |+.++.+++ .++++++.+|+.+..+ .||+|++.
T Consensus 72 ~~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~~~~~~~fD~Iv~~ 151 (317)
T 1dl5_A 72 GLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGVPEFSPYDVIFVT 151 (317)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCEEEEEEC
T ss_pred CCCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhccccCCCeEEEEEc
Confidence 445678999999998 2343 555555543 3569999999987322 49999999
Q ss_pred cccccCChHHHHHHHHHHHHHhcCCCCCcEEEEEee
Q 043585 211 LFFHAFGGEDSLKILKKCREAIAGNGQRGKVLIMDI 246 (287)
Q Consensus 211 ~vlh~~~d~~~~~iL~~~~~al~~~~~~g~lli~e~ 246 (287)
.++|+.. +++++.|+| ||++++...
T Consensus 152 ~~~~~~~--------~~~~~~Lkp---gG~lvi~~~ 176 (317)
T 1dl5_A 152 VGVDEVP--------ETWFTQLKE---GGRVIVPIN 176 (317)
T ss_dssp SBBSCCC--------HHHHHHEEE---EEEEEEEBC
T ss_pred CCHHHHH--------HHHHHhcCC---CcEEEEEEC
Confidence 9999887 456788999 999988643
No 204
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=97.50 E-value=0.00016 Score=59.77 Aligned_cols=101 Identities=15% Similarity=0.220 Sum_probs=66.1
Q ss_pred cCcceEEEecCcc----------------cccc-hhhhhcCCC-CCCceeeeccCcccCCCCCeEEeccccccCChHHHH
Q 043585 161 ERLGSMVDVGGGN----------------VLDL-PHAVANTPQ-TENLKYVADDMFQFIPPADAYFFMLFFHAFGGEDSL 222 (287)
Q Consensus 161 ~~~~~vlDvGgG~----------------v~Dl-p~vi~~a~~-~~Ri~~~~gd~~~~~p~~D~~~l~~vlh~~~d~~~~ 222 (287)
....+|||+|||. .+|. |.+++.+++ ..+++++.+|+.+....+|+|++.-.+|.+++....
T Consensus 50 ~~~~~vlD~gcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~d~~~~~~~~D~v~~~~p~~~~~~~~~~ 129 (200)
T 1ne2_A 50 IGGRSVIDAGTGNGILACGSYLLGAESVTAFDIDPDAIETAKRNCGGVNFMVADVSEISGKYDTWIMNPPFGSVVKHSDR 129 (200)
T ss_dssp SBTSEEEEETCTTCHHHHHHHHTTBSEEEEEESCHHHHHHHHHHCTTSEEEECCGGGCCCCEEEEEECCCC-------CH
T ss_pred CCCCEEEEEeCCccHHHHHHHHcCCCEEEEEECCHHHHHHHHHhcCCCEEEECcHHHCCCCeeEEEECCCchhccCchhH
Confidence 4567999999998 4555 566666654 338999999998821359999999999999876556
Q ss_pred HHHHHHHHHhcCCCCCcEEEEEeeccCCCCCCCCCCHHHHHHHHHhCCCcEEEEE
Q 043585 223 KILKKCREAIAGNGQRGKVLIMDIVINEKEDEDQRTDKEWKTLFLDAGFTCCKIT 277 (287)
Q Consensus 223 ~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~~~rt~~e~~~ll~~aGf~~~~~~ 277 (287)
++++++.+.+ |.++++-. + .+...+.++++++| ++..+.
T Consensus 130 ~~l~~~~~~~------g~~~~~~~--~-------~~~~~~~~~~~~~g-~~~~~~ 168 (200)
T 1ne2_A 130 AFIDKAFETS------MWIYSIGN--A-------KARDFLRREFSARG-DVFREE 168 (200)
T ss_dssp HHHHHHHHHE------EEEEEEEE--G-------GGHHHHHHHHHHHE-EEEEEE
T ss_pred HHHHHHHHhc------CcEEEEEc--C-------chHHHHHHHHHHCC-CEEEEE
Confidence 7888777765 33444431 1 23667888899999 655443
No 205
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=97.49 E-value=8.6e-05 Score=66.60 Aligned_cols=110 Identities=15% Similarity=0.128 Sum_probs=72.6
Q ss_pred cCcceEEEecCcc-----------------cccc-hhhhhcCCC-----------CCCceeeeccCccc---CC-CCCeE
Q 043585 161 ERLGSMVDVGGGN-----------------VLDL-PHAVANTPQ-----------TENLKYVADDMFQF---IP-PADAY 207 (287)
Q Consensus 161 ~~~~~vlDvGgG~-----------------v~Dl-p~vi~~a~~-----------~~Ri~~~~gd~~~~---~p-~~D~~ 207 (287)
....+|||||||. .+|+ |.+++.+++ .+|++++.+|..+. .+ .||+|
T Consensus 76 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~I 155 (314)
T 1uir_A 76 PEPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVV 155 (314)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEE
T ss_pred CCCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEE
Confidence 3567999999998 4555 566666542 46899999999772 23 49999
Q ss_pred EeccccccC--Ch-HH--HHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCCCCCCCHHHHHHHHHhCCCcEEEEE
Q 043585 208 FFMLFFHAF--GG-ED--SLKILKKCREAIAGNGQRGKVLIMDIVINEKEDEDQRTDKEWKTLFLDAGFTCCKIT 277 (287)
Q Consensus 208 ~l~~vlh~~--~d-~~--~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~~~rt~~e~~~ll~~aGf~~~~~~ 277 (287)
++....|.. .+ +. ...++++++++|+| ||.+++.-..... . .........+.+++. |..+...
T Consensus 156 i~d~~~~~~~~~~~~~l~~~~~l~~~~~~Lkp---gG~lv~~~~~~~~-~--~~~~~~~~~~~l~~~-F~~v~~~ 223 (314)
T 1uir_A 156 IIDLTDPVGEDNPARLLYTVEFYRLVKAHLNP---GGVMGMQTGMILL-T--HHRVHPVVHRTVREA-FRYVRSY 223 (314)
T ss_dssp EEECCCCBSTTCGGGGGSSHHHHHHHHHTEEE---EEEEEEEEEEECC------CHHHHHHHHHHTT-CSEEEEE
T ss_pred EECCCCcccccCcchhccHHHHHHHHHHhcCC---CcEEEEEccCccc-c--CHHHHHHHHHHHHHH-CCceEEE
Confidence 997666541 21 11 25789999999999 8988886322210 0 123455666777777 6655544
No 206
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=97.48 E-value=8.8e-06 Score=79.00 Aligned_cols=110 Identities=12% Similarity=0.164 Sum_probs=79.6
Q ss_pred ccCcceEEEecCcc---------------cccc-hhhhhcCCC------CCCceeeeccCcc---cC-C-CCCeEEeccc
Q 043585 160 IERLGSMVDVGGGN---------------VLDL-PHAVANTPQ------TENLKYVADDMFQ---FI-P-PADAYFFMLF 212 (287)
Q Consensus 160 ~~~~~~vlDvGgG~---------------v~Dl-p~vi~~a~~------~~Ri~~~~gd~~~---~~-p-~~D~~~l~~v 212 (287)
..++.+|||||||. .+|. +..|+.|+. .-.|+|..++..+ +. + .||+|++..+
T Consensus 64 ~~~~~~vLDvGCG~G~~~~~la~~ga~V~giD~~~~~i~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~e~ 143 (569)
T 4azs_A 64 LGRPLNVLDLGCAQGFFSLSLASKGATIVGIDFQQENINVCRALAEENPDFAAEFRVGRIEEVIAALEEGEFDLAIGLSV 143 (569)
T ss_dssp HTSCCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTSTTSEEEEEECCHHHHHHHCCTTSCSEEEEESC
T ss_pred cCCCCeEEEECCCCcHHHHHHHhCCCEEEEECCCHHHHHHHHHHHHhcCCCceEEEECCHHHHhhhccCCCccEEEECcc
Confidence 45667999999999 6887 667777753 2368999998765 23 3 4999999999
Q ss_pred cccCChHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCCC-CCCCHHHHHHHHHhCCCc
Q 043585 213 FHAFGGEDSLKILKKCREAIAGNGQRGKVLIMDIVINEKEDE-DQRTDKEWKTLFLDAGFT 272 (287)
Q Consensus 213 lh~~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~-~~rt~~e~~~ll~~aGf~ 272 (287)
||+.+|++...-+.++.+.|++ +++-++...+..+..-. .-+.-.+|+++++.++|.
T Consensus 144 ~ehv~~~~~~~~~~~~~~tl~~---~~~~~~~~~~~~e~~~~~~p~~~~~~~~~i~~~~~~ 201 (569)
T 4azs_A 144 FHHIVHLHGIDEVKRLLSRLAD---VTQAVILELAVKEEPFYWGVSQPDDPRELIEQCAFY 201 (569)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHH---HSSEEEEECCCTTSSSGGGGGSCSSGGGGTTTSSEE
T ss_pred hhcCCCHHHHHHHHHHHHHhcc---ccceeeEEeccccccccccCCCCccHHHhcCHHHHH
Confidence 9999988866667778889999 78888887766554321 112224566666666553
No 207
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=97.47 E-value=0.00012 Score=64.62 Aligned_cols=79 Identities=18% Similarity=0.290 Sum_probs=56.6
Q ss_pred CcceEEEecCcc----------------cccc-hhhhhcCCC-------CCCceeeeccCcccCC-CC---CeEEec---
Q 043585 162 RLGSMVDVGGGN----------------VLDL-PHAVANTPQ-------TENLKYVADDMFQFIP-PA---DAYFFM--- 210 (287)
Q Consensus 162 ~~~~vlDvGgG~----------------v~Dl-p~vi~~a~~-------~~Ri~~~~gd~~~~~p-~~---D~~~l~--- 210 (287)
...+|||+|||+ .+|. |..++.+++ .+|++++.+|++++.+ .| |+|+..
T Consensus 123 ~~~~vLDlG~GsG~~~~~la~~~~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~~~~~~f~~~D~IvsnPPy 202 (284)
T 1nv8_A 123 GIKTVADIGTGSGAIGVSVAKFSDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEPFKEKFASIEMILSNPPY 202 (284)
T ss_dssp TCCEEEEESCTTSHHHHHHHHHSSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGGGGGGTTTCCEEEECCCC
T ss_pred CCCEEEEEeCchhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchhhcccccCCCCEEEEcCCC
Confidence 456999999999 4555 566666553 4579999999998655 48 999985
Q ss_pred ---------ccccc-----CChHHHHHHHHHHH-HHhcCCCCCcEEEE
Q 043585 211 ---------LFFHA-----FGGEDSLKILKKCR-EAIAGNGQRGKVLI 243 (287)
Q Consensus 211 ---------~vlh~-----~~d~~~~~iL~~~~-~al~~~~~~g~lli 243 (287)
.+.|. +..++...+++++. +.++| ||.+++
T Consensus 203 i~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~p---gG~l~~ 247 (284)
T 1nv8_A 203 VKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTS---GKIVLM 247 (284)
T ss_dssp BCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCT---TCEEEE
T ss_pred CCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCC---CCEEEE
Confidence 33321 11122347899999 99999 888886
No 208
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=97.46 E-value=0.0002 Score=62.66 Aligned_cols=82 Identities=15% Similarity=0.118 Sum_probs=55.3
Q ss_pred ccCcceEEEecCcc--------------cccchhhhhcCCC--CC------Cceee--eccCcccCC-CCCeEEeccccc
Q 043585 160 IERLGSMVDVGGGN--------------VLDLPHAVANTPQ--TE------NLKYV--ADDMFQFIP-PADAYFFMLFFH 214 (287)
Q Consensus 160 ~~~~~~vlDvGgG~--------------v~Dlp~vi~~a~~--~~------Ri~~~--~gd~~~~~p-~~D~~~l~~vlh 214 (287)
+....+|||||||. .+|+-+++..+++ .. +++++ .+|+.+-.+ .+|+|++... |
T Consensus 72 ~~~g~~VLDlGcGtG~~s~~la~~~~V~gvD~s~m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~~~~fD~V~sd~~-~ 150 (265)
T 2oxt_A 72 VELTGRVVDLGCGRGGWSYYAASRPHVMDVRAYTLGVGGHEVPRITESYGWNIVKFKSRVDIHTLPVERTDVIMCDVG-E 150 (265)
T ss_dssp CCCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCCSSCCCCCCCCBTTGGGEEEECSCCTTTSCCCCCSEEEECCC-C
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHcCcEEEEECchhhhhhhhhhhhhhccCCCeEEEecccCHhHCCCCCCcEEEEeCc-c
Confidence 45678999999999 5676444333322 11 68888 899987213 4999998755 3
Q ss_pred cCC----hHH-HHHHHHHHHHHhcCCCCCc--EEEEEe
Q 043585 215 AFG----GED-SLKILKKCREAIAGNGQRG--KVLIMD 245 (287)
Q Consensus 215 ~~~----d~~-~~~iL~~~~~al~~~~~~g--~lli~e 245 (287)
... |+. ...+|+.+++.|+| || .+++-.
T Consensus 151 ~~~~~~~d~~~~l~~L~~~~r~Lkp---GG~~~fv~kv 185 (265)
T 2oxt_A 151 SSPKWSVESERTIKILELLEKWKVK---NPSADFVVKV 185 (265)
T ss_dssp CCSCHHHHHHHHHHHHHHHHHHHHH---CTTCEEEEEE
T ss_pred cCCccchhHHHHHHHHHHHHHHhcc---CCCeEEEEEe
Confidence 321 111 23588999999999 89 777744
No 209
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=97.45 E-value=6.9e-05 Score=66.67 Aligned_cols=109 Identities=11% Similarity=0.065 Sum_probs=67.7
Q ss_pred CcceEEEecCcc-----------------cccc-hhhhhcCCC----------CCCceeeeccCcccC---C-CCCeEEe
Q 043585 162 RLGSMVDVGGGN-----------------VLDL-PHAVANTPQ----------TENLKYVADDMFQFI---P-PADAYFF 209 (287)
Q Consensus 162 ~~~~vlDvGgG~-----------------v~Dl-p~vi~~a~~----------~~Ri~~~~gd~~~~~---p-~~D~~~l 209 (287)
...+|||||||. .+|+ |.+++.+++ .+|++++.+|..+.. + .||+|++
T Consensus 90 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~ 169 (296)
T 1inl_A 90 NPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVIII 169 (296)
T ss_dssp SCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEEE
Confidence 457999999998 4565 666666542 478999999987632 2 4999997
Q ss_pred ccccccCChH---HHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCCCCCCCHHHHHHHHHhCCCcEEEEEe
Q 043585 210 MLFFHAFGGE---DSLKILKKCREAIAGNGQRGKVLIMDIVINEKEDEDQRTDKEWKTLFLDAGFTCCKITT 278 (287)
Q Consensus 210 ~~vlh~~~d~---~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~~~rt~~e~~~ll~~aGf~~~~~~~ 278 (287)
.-.-+..... ....+++++++.|+| ||.+++... .+ ........++.+.++++ |..+..+.
T Consensus 170 d~~~~~~~~~~~l~~~~~l~~~~~~Lkp---gG~lv~~~~-~~---~~~~~~~~~~~~~l~~~-F~~v~~~~ 233 (296)
T 1inl_A 170 DSTDPTAGQGGHLFTEEFYQACYDALKE---DGVFSAETE-DP---FYDIGWFKLAYRRISKV-FPITRVYL 233 (296)
T ss_dssp EC----------CCSHHHHHHHHHHEEE---EEEEEEECC-CT---TTTHHHHHHHHHHHHHH-CSEEEEEE
T ss_pred cCCCcccCchhhhhHHHHHHHHHHhcCC---CcEEEEEcc-Cc---ccCHHHHHHHHHHHHHH-CCceEEEE
Confidence 4222201110 125789999999999 888877521 11 00122345566666676 77666554
No 210
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=97.45 E-value=0.00031 Score=58.26 Aligned_cols=105 Identities=16% Similarity=0.161 Sum_probs=73.4
Q ss_pred cCcceEEEecCcc----------------cccc-hhhhhcCCC-----CCCceeeeccCcccCCCCCeEEeccccccCCh
Q 043585 161 ERLGSMVDVGGGN----------------VLDL-PHAVANTPQ-----TENLKYVADDMFQFIPPADAYFFMLFFHAFGG 218 (287)
Q Consensus 161 ~~~~~vlDvGgG~----------------v~Dl-p~vi~~a~~-----~~Ri~~~~gd~~~~~p~~D~~~l~~vlh~~~d 218 (287)
....+|||+|||. .+|. |..++.+++ .-+++++.+|+.+....+|+|++.-.+|.+..
T Consensus 48 ~~~~~vlD~g~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~D~v~~~~p~~~~~~ 127 (207)
T 1wy7_A 48 IEGKVVADLGAGTGVLSYGALLLGAKEVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSEFNSRVDIVIMNPPFGSQRK 127 (207)
T ss_dssp STTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGGCCCCCSEEEECCCCSSSST
T ss_pred CCcCEEEEeeCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCCCEEEEECchHHcCCCCCEEEEcCCCccccC
Confidence 3567999999999 4555 556655543 12799999999883126999999999998876
Q ss_pred HHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCCCCCCCHHHHHHHHHhCCCcEEEEEe
Q 043585 219 EDSLKILKKCREAIAGNGQRGKVLIMDIVINEKEDEDQRTDKEWKTLFLDAGFTCCKITT 278 (287)
Q Consensus 219 ~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~~~rt~~e~~~ll~~aGf~~~~~~~ 278 (287)
.....+|+++.+.+ . + +++.. .+ ...+.+...+++++.||++..+..
T Consensus 128 ~~~~~~l~~~~~~l-~----~-~~~~~--~~-----~~~~~~~~~~~l~~~g~~~~~~~~ 174 (207)
T 1wy7_A 128 HADRPFLLKAFEIS-D----V-VYSIH--LA-----KPEVRRFIEKFSWEHGFVVTHRLT 174 (207)
T ss_dssp TTTHHHHHHHHHHC-S----E-EEEEE--EC-----CHHHHHHHHHHHHHTTEEEEEEEE
T ss_pred CchHHHHHHHHHhc-C----c-EEEEE--eC-----CcCCHHHHHHHHHHCCCeEEEEEE
Confidence 66677888887775 2 3 44433 11 122456678889999998766554
No 211
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=97.44 E-value=0.00027 Score=62.30 Aligned_cols=81 Identities=16% Similarity=0.093 Sum_probs=55.0
Q ss_pred ccCcceEEEecCcc--------------cccchhhhhcCCC--CC------Cceee--eccCcc-cCCCCCeEEeccccc
Q 043585 160 IERLGSMVDVGGGN--------------VLDLPHAVANTPQ--TE------NLKYV--ADDMFQ-FIPPADAYFFMLFFH 214 (287)
Q Consensus 160 ~~~~~~vlDvGgG~--------------v~Dlp~vi~~a~~--~~------Ri~~~--~gd~~~-~~p~~D~~~l~~vlh 214 (287)
+....+|||||||. .+|+-+++..+++ .. +++++ .+|+.+ +...+|+|++... |
T Consensus 80 ~~~g~~VLDlGcGtG~~s~~la~~~~V~gVD~s~m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~~~~fD~Vvsd~~-~ 158 (276)
T 2wa2_A 80 VELKGTVVDLGCGRGSWSYYAASQPNVREVKAYTLGTSGHEKPRLVETFGWNLITFKSKVDVTKMEPFQADTVLCDIG-E 158 (276)
T ss_dssp CCCCEEEEEESCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCCCCTTGGGEEEECSCCGGGCCCCCCSEEEECCC-C
T ss_pred CCCCCEEEEeccCCCHHHHHHHHcCCEEEEECchhhhhhhhchhhhhhcCCCeEEEeccCcHhhCCCCCcCEEEECCC-c
Confidence 45678999999999 5676444333322 11 68999 999987 3124999998765 3
Q ss_pred cCC----hHH-HHHHHHHHHHHhcCCCCCc--EEEEE
Q 043585 215 AFG----GED-SLKILKKCREAIAGNGQRG--KVLIM 244 (287)
Q Consensus 215 ~~~----d~~-~~~iL~~~~~al~~~~~~g--~lli~ 244 (287)
... |.. ..++|+.+++.|+| || .+++.
T Consensus 159 ~~~~~~~d~~~~l~~L~~~~r~Lkp---GG~~~~v~~ 192 (276)
T 2wa2_A 159 SNPTAAVEASRTLTVLNVISRWLEY---NQGCGFCVK 192 (276)
T ss_dssp CCSCHHHHHHHHHHHHHHHHHHHHH---STTCEEEEE
T ss_pred CCCchhhhHHHHHHHHHHHHHHhcc---CCCcEEEEE
Confidence 321 211 23588999999999 89 77773
No 212
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=97.41 E-value=5.2e-05 Score=63.32 Aligned_cols=80 Identities=11% Similarity=0.127 Sum_probs=57.5
Q ss_pred CcceEEEecCcc----------------cccc-hhhhhcCCC------CCCceeeeccCcc--cCC--CCCeEEeccccc
Q 043585 162 RLGSMVDVGGGN----------------VLDL-PHAVANTPQ------TENLKYVADDMFQ--FIP--PADAYFFMLFFH 214 (287)
Q Consensus 162 ~~~~vlDvGgG~----------------v~Dl-p~vi~~a~~------~~Ri~~~~gd~~~--~~p--~~D~~~l~~vlh 214 (287)
...+|||+|||. .+|. |.+++.+++ .++++++.+|+.+ +.+ .+|+|++...+|
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~~~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~~~~~~~~fD~V~~~~p~~ 133 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLAQKGTPHNIVFVDPPFR 133 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHHSSCCCCEEEEEECCSSS
T ss_pred CCCeEEEeCCCcCHHHHHHHhcCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHHHhhcCCCCCEEEECCCCC
Confidence 457999999999 4665 666666653 2589999999877 222 499999887766
Q ss_pred cCChHHHHHHHHHHHHH--hcCCCCCcEEEEEeec
Q 043585 215 AFGGEDSLKILKKCREA--IAGNGQRGKVLIMDIV 247 (287)
Q Consensus 215 ~~~d~~~~~iL~~~~~a--l~~~~~~g~lli~e~~ 247 (287)
. .....+++.+.+. |+| ||.+++....
T Consensus 134 ~---~~~~~~l~~l~~~~~L~p---gG~l~i~~~~ 162 (202)
T 2fpo_A 134 R---GLLEETINLLEDNGWLAD---EALIYVESEV 162 (202)
T ss_dssp T---TTHHHHHHHHHHTTCEEE---EEEEEEEEEG
T ss_pred C---CcHHHHHHHHHhcCccCC---CcEEEEEECC
Confidence 2 2234677777664 999 8888776544
No 213
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=97.41 E-value=0.00029 Score=63.93 Aligned_cols=106 Identities=13% Similarity=0.073 Sum_probs=74.8
Q ss_pred cccCcceEEEecCcc------------------cccc-hhhhhcCCC------CCCceeeeccCcc-cCC--CCCeEEec
Q 043585 159 LIERLGSMVDVGGGN------------------VLDL-PHAVANTPQ------TENLKYVADDMFQ-FIP--PADAYFFM 210 (287)
Q Consensus 159 ~~~~~~~vlDvGgG~------------------v~Dl-p~vi~~a~~------~~Ri~~~~gd~~~-~~p--~~D~~~l~ 210 (287)
.+.+..+|||+|||+ .+|. |.+++.|++ .++|+++.+|+.+ +.+ .+|+|++.
T Consensus 200 ~~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~D~~~~~~~~~~~D~Ii~n 279 (354)
T 3tma_A 200 DARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLSWIRFLRADARHLPRFFPEVDRILAN 279 (354)
T ss_dssp TCCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCTTCEEEECCGGGGGGTCCCCSEEEEC
T ss_pred CCCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCCceEEEeCChhhCccccCCCCEEEEC
Confidence 456678999999999 3444 566666653 2389999999998 433 47999985
Q ss_pred cccccCCh--HH----HHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCCCCCCCHHHHHHHHHhCCCcEEEEEec
Q 043585 211 LFFHAFGG--ED----SLKILKKCREAIAGNGQRGKVLIMDIVINEKEDEDQRTDKEWKTLFLDAGFTCCKITTM 279 (287)
Q Consensus 211 ~vlh~~~d--~~----~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~~~rt~~e~~~ll~~aGf~~~~~~~~ 279 (287)
-..+.... .+ -..+++.+++.|+| ||+++++.. ..+.++++++ .||+..+...+
T Consensus 280 pPyg~r~~~~~~~~~~~~~~~~~~~~~Lkp---gG~l~i~t~-----------~~~~~~~~~~-~g~~~~~~~~l 339 (354)
T 3tma_A 280 PPHGLRLGRKEGLFHLYWDFLRGALALLPP---GGRVALLTL-----------RPALLKRALP-PGFALRHARVV 339 (354)
T ss_dssp CCSCC----CHHHHHHHHHHHHHHHHTSCT---TCEEEEEES-----------CHHHHHHHCC-TTEEEEEEEEC
T ss_pred CCCcCccCCcccHHHHHHHHHHHHHHhcCC---CcEEEEEeC-----------CHHHHHHHhh-cCcEEEEEEEE
Confidence 44432211 11 26799999999999 999999743 2445666666 99999887776
No 214
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=97.41 E-value=5e-05 Score=63.48 Aligned_cols=80 Identities=13% Similarity=0.207 Sum_probs=57.5
Q ss_pred cCcceEEEecCcc------------------cccc-hhhhhcCCC-------CCCceeeeccCcccCC---CCCeEEecc
Q 043585 161 ERLGSMVDVGGGN------------------VLDL-PHAVANTPQ-------TENLKYVADDMFQFIP---PADAYFFML 211 (287)
Q Consensus 161 ~~~~~vlDvGgG~------------------v~Dl-p~vi~~a~~-------~~Ri~~~~gd~~~~~p---~~D~~~l~~ 211 (287)
.+..+|||||||. .+|. |.+++.+++ .+|++++.+|..+..| +||+|++..
T Consensus 55 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~ 134 (210)
T 3c3p_A 55 KQPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAGQRDIDILFMDC 134 (210)
T ss_dssp HCCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTTCCSEEEEEEET
T ss_pred hCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhccCCCCCEEEEcC
Confidence 4567999999999 3444 555555543 3589999999876322 289888752
Q ss_pred ccccCChHHHHHHHHHHHHHhcCCCCCcEEEEEeecc
Q 043585 212 FFHAFGGEDSLKILKKCREAIAGNGQRGKVLIMDIVI 248 (287)
Q Consensus 212 vlh~~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~ 248 (287)
+..+...+++++++.|+| ||.+++.+...
T Consensus 135 -----~~~~~~~~l~~~~~~Lkp---gG~lv~~~~~~ 163 (210)
T 3c3p_A 135 -----DVFNGADVLERMNRCLAK---NALLIAVNALR 163 (210)
T ss_dssp -----TTSCHHHHHHHHGGGEEE---EEEEEEESSSS
T ss_pred -----ChhhhHHHHHHHHHhcCC---CeEEEEECccc
Confidence 234457899999999999 88888766544
No 215
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=97.40 E-value=4.3e-05 Score=65.26 Aligned_cols=81 Identities=14% Similarity=0.169 Sum_probs=58.5
Q ss_pred cCcceEEEecCcc------------------cccc-hhhhhcCCC-------CCCceeeeccCccc---C------CCCC
Q 043585 161 ERLGSMVDVGGGN------------------VLDL-PHAVANTPQ-------TENLKYVADDMFQF---I------PPAD 205 (287)
Q Consensus 161 ~~~~~vlDvGgG~------------------v~Dl-p~vi~~a~~-------~~Ri~~~~gd~~~~---~------p~~D 205 (287)
.+..+|||||||. .+|. |..++.+++ .++|+++.+|+.+. + ..||
T Consensus 71 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~fD 150 (232)
T 3cbg_A 71 TGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPEFD 150 (232)
T ss_dssp HTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCCEE
T ss_pred cCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCCcC
Confidence 4567999999998 3443 455555543 36899999997652 2 3489
Q ss_pred eEEeccccccCChHHHHHHHHHHHHHhcCCCCCcEEEEEeeccC
Q 043585 206 AYFFMLFFHAFGGEDSLKILKKCREAIAGNGQRGKVLIMDIVIN 249 (287)
Q Consensus 206 ~~~l~~vlh~~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~ 249 (287)
+|++... .++...+++++.+.|+| ||.|++.+...+
T Consensus 151 ~V~~d~~-----~~~~~~~l~~~~~~Lkp---gG~lv~~~~~~~ 186 (232)
T 3cbg_A 151 LIFIDAD-----KRNYPRYYEIGLNLLRR---GGLMVIDNVLWH 186 (232)
T ss_dssp EEEECSC-----GGGHHHHHHHHHHTEEE---EEEEEEECTTGG
T ss_pred EEEECCC-----HHHHHHHHHHHHHHcCC---CeEEEEeCCCcC
Confidence 9987543 34567899999999999 888888766554
No 216
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=97.39 E-value=6.8e-05 Score=64.51 Aligned_cols=76 Identities=16% Similarity=0.333 Sum_probs=52.0
Q ss_pred cCcceEEEecCcc-----------------cccc-hhhhhcCC--------------CCCCceeeeccCcccCC------
Q 043585 161 ERLGSMVDVGGGN-----------------VLDL-PHAVANTP--------------QTENLKYVADDMFQFIP------ 202 (287)
Q Consensus 161 ~~~~~vlDvGgG~-----------------v~Dl-p~vi~~a~--------------~~~Ri~~~~gd~~~~~p------ 202 (287)
....+|||||||. .+|. +.+++.++ ..++++++.+|+++.++
T Consensus 48 ~~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~~ 127 (246)
T 2vdv_E 48 TKKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEKG 127 (246)
T ss_dssp SCCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCTT
T ss_pred CCCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhcccc
Confidence 3567999999999 4564 55555442 12579999999987322
Q ss_pred CCCeEEeccccccCChHHH-----------HHHHHHHHHHhcCCCCCcEEEEE
Q 043585 203 PADAYFFMLFFHAFGGEDS-----------LKILKKCREAIAGNGQRGKVLIM 244 (287)
Q Consensus 203 ~~D~~~l~~vlh~~~d~~~-----------~~iL~~~~~al~~~~~~g~lli~ 244 (287)
.+|.|++ .+++... ..+|+++.+.|+| ||.|++.
T Consensus 128 ~~d~v~~-----~~p~p~~k~~~~~~r~~~~~~l~~~~~~Lkp---gG~l~~~ 172 (246)
T 2vdv_E 128 QLSKMFF-----CFPDPHFKQRKHKARIITNTLLSEYAYVLKE---GGVVYTI 172 (246)
T ss_dssp CEEEEEE-----ESCCCC------CSSCCCHHHHHHHHHHEEE---EEEEEEE
T ss_pred ccCEEEE-----ECCCcccccchhHHhhccHHHHHHHHHHcCC---CCEEEEE
Confidence 2555553 2333321 3799999999999 9999885
No 217
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=97.38 E-value=0.00062 Score=61.62 Aligned_cols=108 Identities=11% Similarity=0.135 Sum_probs=83.6
Q ss_pred cCcceEEEecCcc-----------------cccchhhhhcCCC---------------------------CCCceeeecc
Q 043585 161 ERLGSMVDVGGGN-----------------VLDLPHAVANTPQ---------------------------TENLKYVADD 196 (287)
Q Consensus 161 ~~~~~vlDvGgG~-----------------v~Dlp~vi~~a~~---------------------------~~Ri~~~~gd 196 (287)
.+...||.+|||. =+|+|+|++.-++ .+|..+++.|
T Consensus 96 ~~~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~v~~D 175 (334)
T 1rjd_A 96 NEKVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDYNESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKLAACD 175 (334)
T ss_dssp CSSEEEEEETCTTCCTHHHHHHHCTTEEEEEEECHHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEEEEECC
T ss_pred CCCcEEEEeCCCCccHHHHhcCcCCCCEEEECCCHHHHHHHHHHhhhccchhhhcccccccccccccccCCCceEEEecC
Confidence 3568999999998 4777887654221 3789999999
Q ss_pred Cccc-C----------CC-CCeEEeccccccCChHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCCC----------
Q 043585 197 MFQF-I----------PP-ADAYFFMLFFHAFGGEDSLKILKKCREAIAGNGQRGKVLIMDIVINEKEDE---------- 254 (287)
Q Consensus 197 ~~~~-~----------p~-~D~~~l~~vlh~~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~---------- 254 (287)
+.+. . ++ ..+++.-.+|++++.+++.++|+.+.+.+ | +|.+++.|.+.+.....
T Consensus 176 L~d~~w~~~ll~~~~d~~~Ptl~iaEgvL~YL~~~~~~~ll~~ia~~~-~---~~~~v~~e~i~~~~~~~~fg~~m~~~l 251 (334)
T 1rjd_A 176 LNDITETTRLLDVCTKREIPTIVISECLLCYMHNNESQLLINTIMSKF-S---HGLWISYDPIGGSQPNDRFGAIMQSNL 251 (334)
T ss_dssp TTCHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHC-S---SEEEEEEEECCCCSTTCCHHHHHHHHH
T ss_pred CCCcHHHHHHHHhcCCCCCCEEEEEcchhhCCCHHHHHHHHHHHHhhC-C---CcEEEEEeccCCCCCcchHHHHHHHHh
Confidence 9872 1 12 56888889999999999999999998877 5 68998999987722211
Q ss_pred ------------CCCCHHHHHHHHHhCCCc
Q 043585 255 ------------DQRTDKEWKTLFLDAGFT 272 (287)
Q Consensus 255 ------------~~rt~~e~~~ll~~aGf~ 272 (287)
.-.|.++..++|.++||+
T Consensus 252 ~~~rg~~l~~~~~y~s~~~~~~rl~~~Gf~ 281 (334)
T 1rjd_A 252 KESRNLEMPTLMTYNSKEKYASRWSAAPNV 281 (334)
T ss_dssp HHHHCCCCTTTTTTCSHHHHHGGGTTSSEE
T ss_pred hcccCCcccccccCCCHHHHHHHHHHCCCC
Confidence 124888899999999997
No 218
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=97.37 E-value=8.3e-05 Score=64.30 Aligned_cols=81 Identities=9% Similarity=0.098 Sum_probs=58.1
Q ss_pred ccCcceEEEecCcc------------------cccc-hhhhhcCCC-------CCCceeeeccCccc---C------C-C
Q 043585 160 IERLGSMVDVGGGN------------------VLDL-PHAVANTPQ-------TENLKYVADDMFQF---I------P-P 203 (287)
Q Consensus 160 ~~~~~~vlDvGgG~------------------v~Dl-p~vi~~a~~-------~~Ri~~~~gd~~~~---~------p-~ 203 (287)
..+..+|||||||. .+|. |..++.+++ .+||+++.+|..+. + + .
T Consensus 77 ~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~ 156 (247)
T 1sui_A 77 LINAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGS 156 (247)
T ss_dssp HTTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTTC
T ss_pred hhCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccCCCCC
Confidence 34678999999998 3444 455555542 36899999998762 2 2 4
Q ss_pred CCeEEeccccccCChHHHHHHHHHHHHHhcCCCCCcEEEEEeecc
Q 043585 204 ADAYFFMLFFHAFGGEDSLKILKKCREAIAGNGQRGKVLIMDIVI 248 (287)
Q Consensus 204 ~D~~~l~~vlh~~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~ 248 (287)
||+|++... .++...+++.+.+.|+| ||.|++-+...
T Consensus 157 fD~V~~d~~-----~~~~~~~l~~~~~~Lkp---GG~lv~d~~~~ 193 (247)
T 1sui_A 157 YDFIFVDAD-----KDNYLNYHKRLIDLVKV---GGVIGYDNTLW 193 (247)
T ss_dssp BSEEEECSC-----STTHHHHHHHHHHHBCT---TCCEEEECTTG
T ss_pred EEEEEEcCc-----hHHHHHHHHHHHHhCCC---CeEEEEecCCc
Confidence 999987543 33457899999999999 89887765444
No 219
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=97.36 E-value=0.0003 Score=63.61 Aligned_cols=103 Identities=16% Similarity=0.192 Sum_probs=70.4
Q ss_pred CcceEEEecCcc---------------cccc-hhhhhcCCC-------CC-CceeeeccCcccC------C-CCCeEEec
Q 043585 162 RLGSMVDVGGGN---------------VLDL-PHAVANTPQ-------TE-NLKYVADDMFQFI------P-PADAYFFM 210 (287)
Q Consensus 162 ~~~~vlDvGgG~---------------v~Dl-p~vi~~a~~-------~~-Ri~~~~gd~~~~~------p-~~D~~~l~ 210 (287)
...+|||+|||+ .+|. |.+++.+++ .+ +++++.+|+++.. . .||+|++.
T Consensus 153 ~~~~VLDlgcGtG~~sl~la~~ga~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~~~~~fD~Ii~d 232 (332)
T 2igt_A 153 RPLKVLNLFGYTGVASLVAAAAGAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERRGSTYDIILTD 232 (332)
T ss_dssp SCCEEEEETCTTCHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHHTCCBSEEEEC
T ss_pred CCCcEEEcccccCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHHhcCCCceEEEEC
Confidence 456999999999 5666 666666653 23 6999999998832 2 59999983
Q ss_pred cc---------cccCChHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCCCCCCCHHHHHHHHH----hCCCcEE
Q 043585 211 LF---------FHAFGGEDSLKILKKCREAIAGNGQRGKVLIMDIVINEKEDEDQRTDKEWKTLFL----DAGFTCC 274 (287)
Q Consensus 211 ~v---------lh~~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~~~rt~~e~~~ll~----~aGf~~~ 274 (287)
-. ++.+ .++...+++++.+.|+| ||.+++...... ..+.+++.++++ ++|+++.
T Consensus 233 PP~~~~~~~~~~~~~-~~~~~~ll~~~~~~Lkp---gG~lli~~~~~~------~~~~~~~~~~l~~a~~~~g~~v~ 299 (332)
T 2igt_A 233 PPKFGRGTHGEVWQL-FDHLPLMLDICREILSP---KALGLVLTAYSI------RASFYSMHELMRETMRGAGGVVA 299 (332)
T ss_dssp CCSEEECTTCCEEEH-HHHHHHHHHHHHHTBCT---TCCEEEEEECCT------TSCHHHHHHHHHHHTTTSCSEEE
T ss_pred CccccCCchHHHHHH-HHHHHHHHHHHHHhcCc---CcEEEEEECCCC------CCCHHHHHHHHHHHHHHcCCeEE
Confidence 21 1111 23456899999999999 898776544322 224567777776 6788765
No 220
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=97.35 E-value=4.8e-05 Score=68.39 Aligned_cols=108 Identities=13% Similarity=0.150 Sum_probs=65.4
Q ss_pred cCcceEEEecCcc-----------------cccc-hhhhhcCCC----------CCCceeeeccCcccC---C-CCCeEE
Q 043585 161 ERLGSMVDVGGGN-----------------VLDL-PHAVANTPQ----------TENLKYVADDMFQFI---P-PADAYF 208 (287)
Q Consensus 161 ~~~~~vlDvGgG~-----------------v~Dl-p~vi~~a~~----------~~Ri~~~~gd~~~~~---p-~~D~~~ 208 (287)
....+|||||||. .+|+ |.+++.|++ .+|++++.+|..+.+ + .||+|+
T Consensus 107 ~~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 186 (314)
T 2b2c_A 107 PDPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVII 186 (314)
T ss_dssp SSCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEEE
Confidence 3567999999998 4565 666666542 468999999987732 2 499999
Q ss_pred eccccccCChHHH---HHHHHHHHHHhcCCCCCcEEEEEeeccCCCCCCCCCCHHHHHHHHHhCCCcEEEEE
Q 043585 209 FMLFFHAFGGEDS---LKILKKCREAIAGNGQRGKVLIMDIVINEKEDEDQRTDKEWKTLFLDAGFTCCKIT 277 (287)
Q Consensus 209 l~~vlh~~~d~~~---~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~~~rt~~e~~~ll~~aGf~~~~~~ 277 (287)
+... +.+.+... ..+++++++.|+| ||.+++..... -..........+.+++. |..+...
T Consensus 187 ~d~~-~~~~~~~~l~t~~~l~~~~~~Lkp---gG~lv~~~~~~----~~~~~~~~~~~~~l~~v-F~~v~~~ 249 (314)
T 2b2c_A 187 TDSS-DPVGPAESLFGQSYYELLRDALKE---DGILSSQGESV----WLHLPLIAHLVAFNRKI-FPAVTYA 249 (314)
T ss_dssp ECCC--------------HHHHHHHHEEE---EEEEEEECCCT----TTCHHHHHHHHHHHHHH-CSEEEEE
T ss_pred EcCC-CCCCcchhhhHHHHHHHHHhhcCC---CeEEEEECCCc----ccCHHHHHHHHHHHHHH-CCcceEE
Confidence 7543 32322221 6899999999999 88887753111 00112234455556655 6665544
No 221
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=97.32 E-value=7.2e-05 Score=66.13 Aligned_cols=80 Identities=19% Similarity=0.253 Sum_probs=57.4
Q ss_pred cccCcceEEEecCcc---------------cccc-hhhhhcCCC-------CCCceeeeccCcc-cCCCCCeEEeccccc
Q 043585 159 LIERLGSMVDVGGGN---------------VLDL-PHAVANTPQ-------TENLKYVADDMFQ-FIPPADAYFFMLFFH 214 (287)
Q Consensus 159 ~~~~~~~vlDvGgG~---------------v~Dl-p~vi~~a~~-------~~Ri~~~~gd~~~-~~p~~D~~~l~~vlh 214 (287)
......+|||||||. .+|+ +.+++.+++ .++++++.+|+.+ ++|.+|+|+. +.-+
T Consensus 25 ~~~~~~~VLDiG~G~G~lt~~L~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~~~~~fD~vv~-nlpy 103 (285)
T 1zq9_A 25 ALRPTDVVLEVGPGTGNMTVKLLEKAKKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKTDLPFFDTCVA-NLPY 103 (285)
T ss_dssp CCCTTCEEEEECCTTSTTHHHHHHHSSEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTSCCCCCSEEEE-ECCG
T ss_pred CCCCCCEEEEEcCcccHHHHHHHhhCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceecccchhhcEEEE-ecCc
Confidence 445678999999999 5665 556655542 2589999999998 6778998776 6666
Q ss_pred cCChHHHHHHHHH--------------H--HHHhcCCCCCcEEE
Q 043585 215 AFGGEDSLKILKK--------------C--REAIAGNGQRGKVL 242 (287)
Q Consensus 215 ~~~d~~~~~iL~~--------------~--~~al~~~~~~g~ll 242 (287)
+|+.+....+|.. + +.+++| ||+++
T Consensus 104 ~~~~~~~~~~l~~~~~~~~~~~m~qkEva~r~vlkP---Gg~~y 144 (285)
T 1zq9_A 104 QISSPFVFKLLLHRPFFRCAILMFQREFALRLVAKP---GDKLY 144 (285)
T ss_dssp GGHHHHHHHHHHCSSCCSEEEEEEEHHHHHHHHCCT---TCTTC
T ss_pred ccchHHHHHHHhcCcchhhhhhhhhHHHHHHHhcCC---CCccc
Confidence 7777666666642 2 358899 88653
No 222
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=97.31 E-value=9e-05 Score=63.52 Aligned_cols=80 Identities=13% Similarity=0.142 Sum_probs=57.9
Q ss_pred ccCcceEEEecCcc------------------cccc-hhhhhcCCC-------CCCceeeeccCccc---C------C-C
Q 043585 160 IERLGSMVDVGGGN------------------VLDL-PHAVANTPQ-------TENLKYVADDMFQF---I------P-P 203 (287)
Q Consensus 160 ~~~~~~vlDvGgG~------------------v~Dl-p~vi~~a~~-------~~Ri~~~~gd~~~~---~------p-~ 203 (287)
..+..+|||||||. .+|. |..++.+++ .+||+++.+|..+. + + .
T Consensus 68 ~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~ 147 (237)
T 3c3y_A 68 LVNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEGS 147 (237)
T ss_dssp HTTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTTC
T ss_pred hhCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCCC
Confidence 34678999999998 3454 555655542 46899999998762 2 2 4
Q ss_pred CCeEEeccccccCChHHHHHHHHHHHHHhcCCCCCcEEEEEeec
Q 043585 204 ADAYFFMLFFHAFGGEDSLKILKKCREAIAGNGQRGKVLIMDIV 247 (287)
Q Consensus 204 ~D~~~l~~vlh~~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~ 247 (287)
||+|++. .+.++...+++++.+.|+| ||.|++-+..
T Consensus 148 fD~I~~d-----~~~~~~~~~l~~~~~~L~p---GG~lv~d~~~ 183 (237)
T 3c3y_A 148 YDFGFVD-----ADKPNYIKYHERLMKLVKV---GGIVAYDNTL 183 (237)
T ss_dssp EEEEEEC-----SCGGGHHHHHHHHHHHEEE---EEEEEEECTT
T ss_pred cCEEEEC-----CchHHHHHHHHHHHHhcCC---CeEEEEecCC
Confidence 9999874 3345567899999999999 8877665543
No 223
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=97.29 E-value=0.00019 Score=62.92 Aligned_cols=110 Identities=9% Similarity=0.072 Sum_probs=70.1
Q ss_pred cccCcceEEEecCcc------------------cccc-hhhhhcCCC------CCCceeeeccCcc-cC-----C-CCCe
Q 043585 159 LIERLGSMVDVGGGN------------------VLDL-PHAVANTPQ------TENLKYVADDMFQ-FI-----P-PADA 206 (287)
Q Consensus 159 ~~~~~~~vlDvGgG~------------------v~Dl-p~vi~~a~~------~~Ri~~~~gd~~~-~~-----p-~~D~ 206 (287)
+.....+|||+|||. .+|. +..++.+++ ..+++++.+|+.+ +. + .+|+
T Consensus 80 ~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~~fD~ 159 (274)
T 3ajd_A 80 NPREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVLNTIIINADMRKYKDYLLKNEIFFDK 159 (274)
T ss_dssp CCCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHTTCCEEE
T ss_pred CCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCCcEEEEeCChHhcchhhhhccccCCE
Confidence 345678999999998 3444 444444432 3489999999877 22 3 4999
Q ss_pred EEec------cccc---cCChHH-------HHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCCCCCCCHHHHHHHHHhC-
Q 043585 207 YFFM------LFFH---AFGGED-------SLKILKKCREAIAGNGQRGKVLIMDIVINEKEDEDQRTDKEWKTLFLDA- 269 (287)
Q Consensus 207 ~~l~------~vlh---~~~d~~-------~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~~~rt~~e~~~ll~~a- 269 (287)
|++. .+++ .|+.++ ..++|+++.+.|+| ||++++....+... -..+....++++.
T Consensus 160 Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~Lkp---gG~lv~stcs~~~~-----ene~~v~~~l~~~~ 231 (274)
T 3ajd_A 160 ILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKK---DGELVYSTCSMEVE-----ENEEVIKYILQKRN 231 (274)
T ss_dssp EEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEE---EEEEEEEESCCCTT-----SSHHHHHHHHHHCS
T ss_pred EEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCC---CCEEEEEECCCChH-----HhHHHHHHHHHhCC
Confidence 9986 2333 133332 36899999999999 99998877655431 2355666777654
Q ss_pred CCcEEEE
Q 043585 270 GFTCCKI 276 (287)
Q Consensus 270 Gf~~~~~ 276 (287)
+|+.+.+
T Consensus 232 ~~~~~~~ 238 (274)
T 3ajd_A 232 DVELIII 238 (274)
T ss_dssp SEEEECC
T ss_pred CcEEecC
Confidence 6665443
No 224
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=97.28 E-value=5.2e-05 Score=67.80 Aligned_cols=109 Identities=13% Similarity=0.085 Sum_probs=66.2
Q ss_pred cCcceEEEecCcc-----------------cccc-hhhhhcCCC----------CCCceeeeccCccc--C-C-CCCeEE
Q 043585 161 ERLGSMVDVGGGN-----------------VLDL-PHAVANTPQ----------TENLKYVADDMFQF--I-P-PADAYF 208 (287)
Q Consensus 161 ~~~~~vlDvGgG~-----------------v~Dl-p~vi~~a~~----------~~Ri~~~~gd~~~~--~-p-~~D~~~ 208 (287)
.+..+|||||||. .+|+ |.+++.+++ .+|++++.+|..+. . + .||+|+
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~Ii 173 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVII 173 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEEE
T ss_pred CCCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEEE
Confidence 4568999999999 4555 666666542 57899999998762 2 2 499999
Q ss_pred eccccccCChH--HHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCCCCCCCHHHHHHHHHhCCCcEEEEE
Q 043585 209 FMLFFHAFGGE--DSLKILKKCREAIAGNGQRGKVLIMDIVINEKEDEDQRTDKEWKTLFLDAGFTCCKIT 277 (287)
Q Consensus 209 l~~vlh~~~d~--~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~~~rt~~e~~~ll~~aGf~~~~~~ 277 (287)
+....|.-+.+ ....+++++++.|+| ||.+++.....-. .......+.+.+++. |..+...
T Consensus 174 ~d~~~~~~~~~~l~~~~~l~~~~~~Lkp---gG~lv~~~~~~~~----~~~~~~~~~~~l~~~-f~~v~~~ 236 (304)
T 2o07_A 174 TDSSDPMGPAESLFKESYYQLMKTALKE---DGVLCCQGECQWL----HLDLIKEMRQFCQSL-FPVVAYA 236 (304)
T ss_dssp EECC-----------CHHHHHHHHHEEE---EEEEEEEEECTTT----CHHHHHHHHHHHHHH-CSEEEEE
T ss_pred ECCCCCCCcchhhhHHHHHHHHHhccCC---CeEEEEecCCccc----chHHHHHHHHHHHHh-CCCceeE
Confidence 85443322211 224689999999999 8887775422111 111234444555554 6655444
No 225
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=97.28 E-value=0.00032 Score=64.36 Aligned_cols=104 Identities=13% Similarity=0.130 Sum_probs=73.0
Q ss_pred ccCcceEEEecCcc-----------------cccc-hhhhhcCCC-------CCCceeeeccCcc-cCC--CCCeEEecc
Q 043585 160 IERLGSMVDVGGGN-----------------VLDL-PHAVANTPQ-------TENLKYVADDMFQ-FIP--PADAYFFML 211 (287)
Q Consensus 160 ~~~~~~vlDvGgG~-----------------v~Dl-p~vi~~a~~-------~~Ri~~~~gd~~~-~~p--~~D~~~l~~ 211 (287)
+.+..+|||+|||+ .+|. |.+++.|++ .++|+++.+|+.+ +.+ .+|+|++.-
T Consensus 215 ~~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~~~~~~~fD~Ii~np 294 (373)
T 3tm4_A 215 ELDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQLSQYVDSVDFAISNL 294 (373)
T ss_dssp TCCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGGGGTCSCEEEEEEEC
T ss_pred cCCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhCCcccCCcCEEEECC
Confidence 35678999999999 4555 666666653 3689999999998 554 499999865
Q ss_pred ccccCC-----hHH-HHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCCCCCCCHHHHHHHHHhCCCcEEEEEec
Q 043585 212 FFHAFG-----GED-SLKILKKCREAIAGNGQRGKVLIMDIVINEKEDEDQRTDKEWKTLFLDAGFTCCKITTM 279 (287)
Q Consensus 212 vlh~~~-----d~~-~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~~~rt~~e~~~ll~~aGf~~~~~~~~ 279 (287)
..+... -++ -..+++.+++.| + |+++++.. +.+.+.+.+++.||+..+...+
T Consensus 295 Pyg~r~~~~~~~~~ly~~~~~~l~r~l-~----g~~~~i~~-----------~~~~~~~~~~~~G~~~~~~~~~ 352 (373)
T 3tm4_A 295 PYGLKIGKKSMIPDLYMKFFNELAKVL-E----KRGVFITT-----------EKKAIEEAIAENGFEIIHHRVI 352 (373)
T ss_dssp CCC------CCHHHHHHHHHHHHHHHE-E----EEEEEEES-----------CHHHHHHHHHHTTEEEEEEEEE
T ss_pred CCCcccCcchhHHHHHHHHHHHHHHHc-C----CeEEEEEC-----------CHHHHHHHHHHcCCEEEEEEEE
Confidence 544321 111 257888888888 5 34444321 4678889999999999887776
No 226
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=97.27 E-value=0.00027 Score=61.79 Aligned_cols=104 Identities=9% Similarity=0.008 Sum_probs=68.8
Q ss_pred cCcceEEEecCcc---------------cccc-hhhhhcCCC----------CCCceeeeccCcccCCCCCeEEeccccc
Q 043585 161 ERLGSMVDVGGGN---------------VLDL-PHAVANTPQ----------TENLKYVADDMFQFIPPADAYFFMLFFH 214 (287)
Q Consensus 161 ~~~~~vlDvGgG~---------------v~Dl-p~vi~~a~~----------~~Ri~~~~gd~~~~~p~~D~~~l~~vlh 214 (287)
.+..+|||||||. .+|+ |.+++.+++ .+|++++.+|..+-...||+|++.
T Consensus 71 ~~~~~VL~iG~G~G~~~~~ll~~~~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~~~fD~Ii~d---- 146 (262)
T 2cmg_A 71 KELKEVLIVDGFDLELAHQLFKYDTHIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDIKKYDLIFCL---- 146 (262)
T ss_dssp SCCCEEEEESSCCHHHHHHHTTSSCEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCCCCEEEEEES----
T ss_pred CCCCEEEEEeCCcCHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHHhhCCEEEEC----
Confidence 3567999999998 4555 778887764 368999999998733459999875
Q ss_pred cCChHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCCCCCCCHHHHHHHHHhCCCcEEEEEec
Q 043585 215 AFGGEDSLKILKKCREAIAGNGQRGKVLIMDIVINEKEDEDQRTDKEWKTLFLDAGFTCCKITTM 279 (287)
Q Consensus 215 ~~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~~~rt~~e~~~ll~~aGf~~~~~~~~ 279 (287)
.+++. .+++.+++.|+| ||.+++....... .........+.+++. |..+.....
T Consensus 147 -~~dp~--~~~~~~~~~L~p---gG~lv~~~~~~~~----~~~~~~~~~~~l~~~-F~~~~~~~~ 200 (262)
T 2cmg_A 147 -QEPDI--HRIDGLKRMLKE---DGVFISVAKHPLL----EHVSMQNALKNMGGV-FSVAMPFVA 200 (262)
T ss_dssp -SCCCH--HHHHHHHTTEEE---EEEEEEEEECTTT----CHHHHHHHHHHHHTT-CSEEEEECC
T ss_pred -CCChH--HHHHHHHHhcCC---CcEEEEEcCCccc----CHHHHHHHHHHHHHh-CCceEEEEE
Confidence 33433 489999999999 8888875211100 111233444445554 776665543
No 227
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=97.26 E-value=0.00032 Score=60.14 Aligned_cols=81 Identities=14% Similarity=0.156 Sum_probs=53.2
Q ss_pred cCcceEEEecCcc-----------------cccc-hhhhhcCC------------CCCCceeeeccCcc--c--CC--CC
Q 043585 161 ERLGSMVDVGGGN-----------------VLDL-PHAVANTP------------QTENLKYVADDMFQ--F--IP--PA 204 (287)
Q Consensus 161 ~~~~~vlDvGgG~-----------------v~Dl-p~vi~~a~------------~~~Ri~~~~gd~~~--~--~p--~~ 204 (287)
.+..+|||||||. .+|. +.+++.|+ ...+|+++.+|+.+ + ++ .+
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~~ 124 (235)
T 3ckk_A 45 QAQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQL 124 (235)
T ss_dssp -CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTCE
T ss_pred CCCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcCe
Confidence 4567899999999 4565 45554332 24689999999876 2 44 38
Q ss_pred CeEEeccccccCChH---H----HHHHHHHHHHHhcCCCCCcEEEEEe
Q 043585 205 DAYFFMLFFHAFGGE---D----SLKILKKCREAIAGNGQRGKVLIMD 245 (287)
Q Consensus 205 D~~~l~~vlh~~~d~---~----~~~iL~~~~~al~~~~~~g~lli~e 245 (287)
|.|++...- .|... . ...+|+.+++.|+| ||.|++..
T Consensus 125 D~v~~~~~d-p~~k~~h~krr~~~~~~l~~~~~~Lkp---GG~l~~~t 168 (235)
T 3ckk_A 125 TKMFFLFPD-PHFKRTKHKWRIISPTLLAEYAYVLRV---GGLVYTIT 168 (235)
T ss_dssp EEEEEESCC------------CCCHHHHHHHHHHEEE---EEEEEEEE
T ss_pred eEEEEeCCC-chhhhhhhhhhhhhHHHHHHHHHHCCC---CCEEEEEe
Confidence 888764321 12210 0 13699999999999 99998753
No 228
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=97.24 E-value=0.00012 Score=66.26 Aligned_cols=81 Identities=16% Similarity=0.170 Sum_probs=57.2
Q ss_pred cCcceEEEecCcc-----------------cccc-hhhhhcCCC----------CCCceeeeccCccc---CC--CCCeE
Q 043585 161 ERLGSMVDVGGGN-----------------VLDL-PHAVANTPQ----------TENLKYVADDMFQF---IP--PADAY 207 (287)
Q Consensus 161 ~~~~~vlDvGgG~-----------------v~Dl-p~vi~~a~~----------~~Ri~~~~gd~~~~---~p--~~D~~ 207 (287)
....+|||||||. .+|+ |.+++.+++ .+|++++.+|+.+. .+ .||+|
T Consensus 119 ~~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDlI 198 (334)
T 1xj5_A 119 PNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDAV 198 (334)
T ss_dssp SCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEEE
T ss_pred CCCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccEE
Confidence 4568999999999 4555 666666653 36899999998762 33 49999
Q ss_pred EeccccccCChHH--HHHHHHHHHHHhcCCCCCcEEEEE
Q 043585 208 FFMLFFHAFGGED--SLKILKKCREAIAGNGQRGKVLIM 244 (287)
Q Consensus 208 ~l~~vlh~~~d~~--~~~iL~~~~~al~~~~~~g~lli~ 244 (287)
++....+....+. ...+++.++++|+| ||.+++.
T Consensus 199 i~d~~~p~~~~~~l~~~~~l~~~~~~Lkp---gG~lv~~ 234 (334)
T 1xj5_A 199 IVDSSDPIGPAKELFEKPFFQSVARALRP---GGVVCTQ 234 (334)
T ss_dssp EECCCCTTSGGGGGGSHHHHHHHHHHEEE---EEEEEEE
T ss_pred EECCCCccCcchhhhHHHHHHHHHHhcCC---CcEEEEe
Confidence 9854321111111 36899999999999 8888775
No 229
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=97.21 E-value=0.00049 Score=64.70 Aligned_cols=109 Identities=13% Similarity=0.130 Sum_probs=74.4
Q ss_pred ccCcceEEEecCcc------------------cccc-hhhhhcCCC------CCCceeeeccCcc-c--CC--CCCeEEe
Q 043585 160 IERLGSMVDVGGGN------------------VLDL-PHAVANTPQ------TENLKYVADDMFQ-F--IP--PADAYFF 209 (287)
Q Consensus 160 ~~~~~~vlDvGgG~------------------v~Dl-p~vi~~a~~------~~Ri~~~~gd~~~-~--~p--~~D~~~l 209 (287)
.....+|||+|||. .+|. +..++.+++ ..+++++.+|+.+ + ++ .||+|++
T Consensus 257 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~fD~Vl~ 336 (450)
T 2yxl_A 257 PKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDARKAPEIIGEEVADKVLL 336 (450)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTTCCSSSSCSSCEEEEEE
T ss_pred CCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcChhhcchhhccCCCCEEEE
Confidence 44567999999998 3443 333443332 3579999999987 3 44 3899996
Q ss_pred ------ccccccCCh-------HHH-------HHHHHHHHHHhcCCCCCcEEEEEeeccCCCCCCCCCCHHHHHHHHHhC
Q 043585 210 ------MLFFHAFGG-------EDS-------LKILKKCREAIAGNGQRGKVLIMDIVINEKEDEDQRTDKEWKTLFLDA 269 (287)
Q Consensus 210 ------~~vlh~~~d-------~~~-------~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~~~rt~~e~~~ll~~a 269 (287)
..++|..++ ++. .++|+++.+.|+| ||+|++.++.+.. +-..+....++++.
T Consensus 337 D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~Lkp---GG~lvy~tcs~~~-----~ene~~v~~~l~~~ 408 (450)
T 2yxl_A 337 DAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKP---GGRLLYTTCSIFK-----EENEKNIRWFLNVH 408 (450)
T ss_dssp ECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEE---EEEEEEEESCCCG-----GGTHHHHHHHHHHC
T ss_pred cCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCC---CcEEEEEeCCCCh-----hhHHHHHHHHHHhC
Confidence 345554333 222 5789999999999 9999998876643 12356777788876
Q ss_pred -CCcEEEE
Q 043585 270 -GFTCCKI 276 (287)
Q Consensus 270 -Gf~~~~~ 276 (287)
||+.+.+
T Consensus 409 ~~~~~~~~ 416 (450)
T 2yxl_A 409 PEFKLVPL 416 (450)
T ss_dssp SSCEECCC
T ss_pred CCCEEeec
Confidence 7876543
No 230
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=97.16 E-value=0.003 Score=57.96 Aligned_cols=85 Identities=12% Similarity=0.233 Sum_probs=63.2
Q ss_pred eeeccCcc-cCC--CCCeEEeccccccCCh------------------------------------HHHHHHHHHHHHHh
Q 043585 192 YVADDMFQ-FIP--PADAYFFMLFFHAFGG------------------------------------EDSLKILKKCREAI 232 (287)
Q Consensus 192 ~~~gd~~~-~~p--~~D~~~l~~vlh~~~d------------------------------------~~~~~iL~~~~~al 232 (287)
-++|.|+. .+| .+|+++.+..||-.++ .|-..+|+..++.|
T Consensus 136 gvpgSFy~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~ra~eL 215 (374)
T 3b5i_A 136 GVPGSFYRRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRARAAEV 215 (374)
T ss_dssp EEESCTTSCCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHE
T ss_pred ecChhhhcccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 46778888 577 3999999999997662 13456799999999
Q ss_pred cCCCCCcEEEEEeeccCCCC------------C-------------------------C-CCCCHHHHHHHHH-hCCCcE
Q 043585 233 AGNGQRGKVLIMDIVINEKE------------D-------------------------E-DQRTDKEWKTLFL-DAGFTC 273 (287)
Q Consensus 233 ~~~~~~g~lli~e~~~~~~~------------~-------------------------~-~~rt~~e~~~ll~-~aGf~~ 273 (287)
+| ||++++.-.-.++.. . + ..||.+|++.+++ +.||++
T Consensus 216 ~p---GG~mvl~~~gr~~~~~~~~~~~~~~~~~~l~~al~~l~~eG~i~~e~~d~f~~P~y~ps~~E~~~~l~~~~~F~I 292 (374)
T 3b5i_A 216 KR---GGAMFLVCLGRTSVDPTDQGGAGLLFGTHFQDAWDDLVREGLVAAEKRDGFNIPVYAPSLQDFKEVVDANGSFAI 292 (374)
T ss_dssp EE---EEEEEEEEEECCCSSTTCCHHHHHHHSSHHHHHHHHTTSSSSSCHHHHSSCCCCBCCCCHHHHHHHHHHHCSEEE
T ss_pred CC---CCEEEEEEecCCCCccccccchhhHHHHHHHHHHHHHHHhCCcchhhcccCCccccCCCHHHHHHHHHhcCCcEE
Confidence 99 999887554433210 0 0 5589999999998 599998
Q ss_pred EEEEec
Q 043585 274 CKITTM 279 (287)
Q Consensus 274 ~~~~~~ 279 (287)
..+.-.
T Consensus 293 ~~le~~ 298 (374)
T 3b5i_A 293 DKLVVY 298 (374)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 776544
No 231
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=97.15 E-value=0.00027 Score=61.94 Aligned_cols=101 Identities=18% Similarity=0.195 Sum_probs=69.4
Q ss_pred ccCcceEEEecCcc-----------------cccc-hhhhhcCCC------CCCceeeeccCccc-CC-CCCeEEecccc
Q 043585 160 IERLGSMVDVGGGN-----------------VLDL-PHAVANTPQ------TENLKYVADDMFQF-IP-PADAYFFMLFF 213 (287)
Q Consensus 160 ~~~~~~vlDvGgG~-----------------v~Dl-p~vi~~a~~------~~Ri~~~~gd~~~~-~p-~~D~~~l~~vl 213 (287)
+.+..+|||+|||. .+|. |..++.+++ .++++++.+|+.+. .+ .+|+|++....
T Consensus 117 ~~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~~~~~~~D~Vi~d~p~ 196 (272)
T 3a27_A 117 SNENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDVELKDVADRVIMGYVH 196 (272)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGCCCTTCEEEEEECCCS
T ss_pred cCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHcCccCCceEEEECCcc
Confidence 45668999999999 4555 666666553 35789999999884 22 48999887553
Q ss_pred ccCChHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCCCCCCCHHHHHHHHHh-CCCc
Q 043585 214 HAFGGEDSLKILKKCREAIAGNGQRGKVLIMDIVINEKEDEDQRTDKEWKTLFLD-AGFT 272 (287)
Q Consensus 214 h~~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~~~rt~~e~~~ll~~-aGf~ 272 (287)
....+++.+.+.|+| ||.+++.+....+.. .-+..+..+.+++ .|++
T Consensus 197 ------~~~~~l~~~~~~Lkp---gG~l~~s~~~~~~~~---~~~~~~~~~~~~~~~~~~ 244 (272)
T 3a27_A 197 ------KTHKFLDKTFEFLKD---RGVIHYHETVAEKIM---YERPIERLKFYAEKNGYK 244 (272)
T ss_dssp ------SGGGGHHHHHHHEEE---EEEEEEEEEEEGGGT---TTHHHHHHHHHHHHTTEE
T ss_pred ------cHHHHHHHHHHHcCC---CCEEEEEEcCccccc---cccHHHHHHHHHHHhCCe
Confidence 345689999999999 899998777654321 1234455555554 4443
No 232
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=97.06 E-value=0.00039 Score=58.53 Aligned_cols=76 Identities=16% Similarity=0.159 Sum_probs=55.6
Q ss_pred ccCcceEEEecCcc------------------cccc-hhhhhcCCC-----------CCCceeeeccCcccCC---CCCe
Q 043585 160 IERLGSMVDVGGGN------------------VLDL-PHAVANTPQ-----------TENLKYVADDMFQFIP---PADA 206 (287)
Q Consensus 160 ~~~~~~vlDvGgG~------------------v~Dl-p~vi~~a~~-----------~~Ri~~~~gd~~~~~p---~~D~ 206 (287)
.....+|||||||. .+|. |..++.+++ .++++++.+|+....+ .||+
T Consensus 75 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 154 (226)
T 1i1n_A 75 LHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYAEEAPYDA 154 (226)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCGGGCCEEE
T ss_pred CCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCcccCCCcCE
Confidence 44567999999998 3444 555555542 2589999999876322 4999
Q ss_pred EEeccccccCChHHHHHHHHHHHHHhcCCCCCcEEEEEee
Q 043585 207 YFFMLFFHAFGGEDSLKILKKCREAIAGNGQRGKVLIMDI 246 (287)
Q Consensus 207 ~~l~~vlh~~~d~~~~~iL~~~~~al~~~~~~g~lli~e~ 246 (287)
|++...++... +++++.|+| ||++++...
T Consensus 155 i~~~~~~~~~~--------~~~~~~Lkp---gG~lv~~~~ 183 (226)
T 1i1n_A 155 IHVGAAAPVVP--------QALIDQLKP---GGRLILPVG 183 (226)
T ss_dssp EEECSBBSSCC--------HHHHHTEEE---EEEEEEEES
T ss_pred EEECCchHHHH--------HHHHHhcCC---CcEEEEEEe
Confidence 99998887654 577889999 999988643
No 233
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=97.01 E-value=0.00041 Score=65.55 Aligned_cols=109 Identities=6% Similarity=0.008 Sum_probs=74.6
Q ss_pred cccCcceEEEecCcc------------------cccc-hhhhhcCCC------CCCceeeeccCcc-c--CC-CCCeEEe
Q 043585 159 LIERLGSMVDVGGGN------------------VLDL-PHAVANTPQ------TENLKYVADDMFQ-F--IP-PADAYFF 209 (287)
Q Consensus 159 ~~~~~~~vlDvGgG~------------------v~Dl-p~vi~~a~~------~~Ri~~~~gd~~~-~--~p-~~D~~~l 209 (287)
......+|||+|||. .+|+ +..++.+++ .. |+++.+|..+ + .+ .||+|++
T Consensus 98 ~~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~-v~~~~~Da~~l~~~~~~~FD~Il~ 176 (464)
T 3m6w_A 98 DPKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAP-LAVTQAPPRALAEAFGTYFHRVLL 176 (464)
T ss_dssp CCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCC-CEEECSCHHHHHHHHCSCEEEEEE
T ss_pred CcCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCe-EEEEECCHHHhhhhccccCCEEEE
Confidence 345678999999998 3454 444444432 34 8999999877 2 23 4999996
Q ss_pred -------------ccccccCChHHH-------HHHHHHHHHHhcCCCCCcEEEEEeeccCCCCCCCCCCHHHHHHHHHhC
Q 043585 210 -------------MLFFHAFGGEDS-------LKILKKCREAIAGNGQRGKVLIMDIVINEKEDEDQRTDKEWKTLFLDA 269 (287)
Q Consensus 210 -------------~~vlh~~~d~~~-------~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~~~rt~~e~~~ll~~a 269 (287)
..+...|+.++. .++|+.+.+.|+| ||+|+...+.+.. +-..+....++++.
T Consensus 177 D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~Lkp---GG~LvysTCs~~~-----eEne~vv~~~l~~~ 248 (464)
T 3m6w_A 177 DAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGP---GGVLVYSTCTFAP-----EENEGVVAHFLKAH 248 (464)
T ss_dssp ECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEE---EEEEEEEESCCCG-----GGTHHHHHHHHHHC
T ss_pred CCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCC---CcEEEEEeccCch-----hcCHHHHHHHHHHC
Confidence 233445655544 7899999999999 9999987765542 22466777777776
Q ss_pred -CCcEEEE
Q 043585 270 -GFTCCKI 276 (287)
Q Consensus 270 -Gf~~~~~ 276 (287)
+|+++.+
T Consensus 249 ~~~~l~~~ 256 (464)
T 3m6w_A 249 PEFRLEDA 256 (464)
T ss_dssp TTEEEECC
T ss_pred CCcEEEec
Confidence 6766554
No 234
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=97.00 E-value=0.0015 Score=61.92 Aligned_cols=101 Identities=14% Similarity=0.094 Sum_probs=68.1
Q ss_pred CcceEEEecCcc------------------cccc-hhhhhcCCC------CCCceeeeccCcc-c--CC-CCCeEEec--
Q 043585 162 RLGSMVDVGGGN------------------VLDL-PHAVANTPQ------TENLKYVADDMFQ-F--IP-PADAYFFM-- 210 (287)
Q Consensus 162 ~~~~vlDvGgG~------------------v~Dl-p~vi~~a~~------~~Ri~~~~gd~~~-~--~p-~~D~~~l~-- 210 (287)
...+|||+|||. .+|. +..++.+++ ..+|+++.+|..+ + .+ .||+|++-
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~nv~~~~~D~~~~~~~~~~~fD~Il~D~P 196 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGISNVALTHFDGRVFGAAVPEMFDAILLDAP 196 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCCSTTHHHHSTTCEEEEEEECC
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCCHHHhhhhccccCCEEEECCC
Confidence 668999999998 3444 344444432 3579999999987 3 34 49999971
Q ss_pred -----------cccccCChHH-------HHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCCCCCCCHHHHHHHHHhCC
Q 043585 211 -----------LFFHAFGGED-------SLKILKKCREAIAGNGQRGKVLIMDIVINEKEDEDQRTDKEWKTLFLDAG 270 (287)
Q Consensus 211 -----------~vlh~~~d~~-------~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~~~rt~~e~~~ll~~aG 270 (287)
.+.+.|++++ ..++|+++.+.|+| ||+|+...+.+.... ..+....++++.+
T Consensus 197 cSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~Lkp---GG~LvysTcs~~~~E-----ne~vv~~~l~~~~ 266 (479)
T 2frx_A 197 CSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRP---GGTLVYSTCTLNQEE-----NEAVCLWLKETYP 266 (479)
T ss_dssp CCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEEEESCCSSTT-----THHHHHHHHHHST
T ss_pred cCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCC---CCEEEEecccCCccc-----CHHHHHHHHHHCC
Confidence 2334566544 24789999999999 999998776554211 2455566676664
No 235
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=96.97 E-value=0.00037 Score=58.88 Aligned_cols=47 Identities=17% Similarity=0.108 Sum_probs=38.5
Q ss_pred CCceeeeccCcccCC---CCCeEEeccccccCChHHHHHHHHHHHHHhcCCCCCcEEEEEe
Q 043585 188 ENLKYVADDMFQFIP---PADAYFFMLFFHAFGGEDSLKILKKCREAIAGNGQRGKVLIMD 245 (287)
Q Consensus 188 ~Ri~~~~gd~~~~~p---~~D~~~l~~vlh~~~d~~~~~iL~~~~~al~~~~~~g~lli~e 245 (287)
++++++.+|..++++ .||+|++...+|... +++++.|+| ||++++.-
T Consensus 145 ~~v~~~~~d~~~~~~~~~~fD~I~~~~~~~~~~--------~~~~~~Lkp---gG~lvi~~ 194 (227)
T 1r18_A 145 GQLLIVEGDGRKGYPPNAPYNAIHVGAAAPDTP--------TELINQLAS---GGRLIVPV 194 (227)
T ss_dssp TSEEEEESCGGGCCGGGCSEEEEEECSCBSSCC--------HHHHHTEEE---EEEEEEEE
T ss_pred CceEEEECCcccCCCcCCCccEEEECCchHHHH--------HHHHHHhcC---CCEEEEEE
Confidence 589999999988544 499999999998765 567788999 89888753
No 236
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=96.94 E-value=0.0011 Score=54.30 Aligned_cols=106 Identities=15% Similarity=0.172 Sum_probs=65.8
Q ss_pred ccCcceEEEecCcc------cccc-hh-----------h--hhcCC--CCCCceee-eccCccc---------CC--CCC
Q 043585 160 IERLGSMVDVGGGN------VLDL-PH-----------A--VANTP--QTENLKYV-ADDMFQF---------IP--PAD 205 (287)
Q Consensus 160 ~~~~~~vlDvGgG~------v~Dl-p~-----------v--i~~a~--~~~Ri~~~-~gd~~~~---------~p--~~D 205 (287)
+....+|||||||. +... +. | ++... ...+++++ .+|+... ++ .+|
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~fD 99 (196)
T 2nyu_A 20 LRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIFPLEGATFLCPADVTDPRTSQRILEVLPGRRAD 99 (196)
T ss_dssp CCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCCCCTTCEEECSCCTTSHHHHHHHHHHSGGGCEE
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcccCCCCeEEEeccCCCHHHHHHHHHhcCCCCCc
Confidence 45678999999999 1111 11 1 11111 14678899 9998762 23 599
Q ss_pred eEEecccccc---C-ChHH-----HHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCCCCCCCHHHHHHHHHhCCCcEEEE
Q 043585 206 AYFFMLFFHA---F-GGED-----SLKILKKCREAIAGNGQRGKVLIMDIVINEKEDEDQRTDKEWKTLFLDAGFTCCKI 276 (287)
Q Consensus 206 ~~~l~~vlh~---~-~d~~-----~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~~~rt~~e~~~ll~~aGf~~~~~ 276 (287)
+|++...+|. | .+.. +..+|+.+++.|+| ||++++.....+ ...++...+... |..+++
T Consensus 100 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkp---gG~lv~~~~~~~--------~~~~~~~~l~~~-f~~v~~ 167 (196)
T 2nyu_A 100 VILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQP---GGTFLCKTWAGS--------QSRRLQRRLTEE-FQNVRI 167 (196)
T ss_dssp EEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEEEECCSG--------GGHHHHHHHHHH-EEEEEE
T ss_pred EEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcC---CCEEEEEecCCc--------cHHHHHHHHHHH-hcceEE
Confidence 9998654442 2 2221 14789999999999 999988654221 245677777664 655554
Q ss_pred E
Q 043585 277 T 277 (287)
Q Consensus 277 ~ 277 (287)
.
T Consensus 168 ~ 168 (196)
T 2nyu_A 168 I 168 (196)
T ss_dssp E
T ss_pred E
Confidence 4
No 237
>3iei_A Leucine carboxyl methyltransferase 1; LCMT-1, S-adenosyl-L-methionine; HET: SAH MES; 1.90A {Homo sapiens} PDB: 3p71_T* 3mnt_A* 3o7w_A*
Probab=96.92 E-value=0.0043 Score=56.03 Aligned_cols=139 Identities=14% Similarity=0.166 Sum_probs=95.7
Q ss_pred HHHHHHHhcccchhhHhhhcccccccCcceEEEecCcc------------------cccchhhhhcCC------------
Q 043585 136 RFNQAMVNDSEMATFIVKDCCRTLIERLGSMVDVGGGN------------------VLDLPHAVANTP------------ 185 (287)
Q Consensus 136 ~f~~aM~~~s~~~~~~~~~~~~~~~~~~~~vlDvGgG~------------------v~Dlp~vi~~a~------------ 185 (287)
..++++...++..-..++.| .....+...||-+|||. =+|+|+|++.=+
T Consensus 65 ~inrG~~~Rt~~iD~~v~~f-l~~~~~~~QVV~LGaGlDTr~~RL~~~~~~~~~~~EVD~P~vi~~K~~~l~~~~~l~~~ 143 (334)
T 3iei_A 65 EINRGYFARVHGVSQLIKAF-LRKTECHCQIVNLGAGMDTTFWRLKDEDLLSSKYFEVDFPMIVTRKLHSIKCKPPLSSP 143 (334)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-HHHTTTCSEEEEETCTTCCHHHHHHHTTCCCSEEEEEECHHHHHHHHHHHHHCHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHH-HHhCCCCCEEEEeCCCcCchHHHhcCCCCCCCeEEECCcHHHHHHHHHHHhhchhhhhh
Confidence 34455554443322225555 21112467899999998 367788755300
Q ss_pred -----------------CCCCceeeeccCccc--C---------C-C-CCeEEeccccccCChHHHHHHHHHHHHHhcCC
Q 043585 186 -----------------QTENLKYVADDMFQF--I---------P-P-ADAYFFMLFFHAFGGEDSLKILKKCREAIAGN 235 (287)
Q Consensus 186 -----------------~~~Ri~~~~gd~~~~--~---------p-~-~D~~~l~~vlh~~~d~~~~~iL~~~~~al~~~ 235 (287)
..++..+++.|+.+. . . + .=+++.=.+|.+++.+++.++|+.+.+..++
T Consensus 144 lg~~~~~~~~~~~~~~l~s~~y~~v~~DL~d~~~l~~~L~~~g~d~~~Ptl~iaEGvL~YL~~~~~~~ll~~ia~~f~~- 222 (334)
T 3iei_A 144 ILELHSEDTLQMDGHILDSKRYAVIGADLRDLSELEEKLKKCNMNTQLPTLLIAECVLVYMTPEQSANLLKWAANSFER- 222 (334)
T ss_dssp HHHHSSSSSCBCCTTEEECSSEEEEECCTTCHHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHCSS-
T ss_pred hcccccccccccccccCCCCceEEEccccccchhHHHHHHhcCCCCCCCEEEEEchhhhCCCHHHHHHHHHHHHHhCCC-
Confidence 157889999999762 1 1 2 3467777899999999999999999988765
Q ss_pred CCCcEEEEEeeccCCCCCC------------------CCCCHHHHHHHHHhCCCcEEEEEec
Q 043585 236 GQRGKVLIMDIVINEKEDE------------------DQRTDKEWKTLFLDAGFTCCKITTM 279 (287)
Q Consensus 236 ~~~g~lli~e~~~~~~~~~------------------~~rt~~e~~~ll~~aGf~~~~~~~~ 279 (287)
|.+++.|.+-+...-. .-.|.++..++|.++||+.+++...
T Consensus 223 ---~~~i~yE~i~p~d~fg~~M~~~l~~~g~pl~sl~~y~t~~~~~~r~~~~Gw~~~~~~d~ 281 (334)
T 3iei_A 223 ---AMFINYEQVNMGDRFGQIMIENLRRRQCDLAGVETCKSLESQKERLLSNGWETASAVDM 281 (334)
T ss_dssp ---EEEEEEEECCTTSHHHHHHHHHHHTTTCCCTTGGGGGCHHHHHHHHHTTTCSEEEEEEH
T ss_pred ---ceEEEEeccCCCCHHHHHHHHHHHHhCCCCcccccCCCHHHHHHHHHHcCCCcceeecH
Confidence 7888889986543210 2357789999999999999877765
No 238
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=96.87 E-value=0.0016 Score=58.24 Aligned_cols=116 Identities=12% Similarity=0.088 Sum_probs=83.6
Q ss_pred hhhcccccccCcceEEEecCcc----------------cccchhhhhcCC---------CCCCceeeeccCcccC-----
Q 043585 152 VKDCCRTLIERLGSMVDVGGGN----------------VLDLPHAVANTP---------QTENLKYVADDMFQFI----- 201 (287)
Q Consensus 152 ~~~~~~~~~~~~~~vlDvGgG~----------------v~Dlp~vi~~a~---------~~~Ri~~~~gd~~~~~----- 201 (287)
++.+ .-.+...||++|+|- -+|+|.|++..+ ..++..+++.|+.+..
T Consensus 95 v~~~---~~~g~~QvV~LGaGlDTra~Rl~~~~~~~v~evD~P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~d~~~~~l~ 171 (310)
T 2uyo_A 95 FNNA---VIDGIRQFVILASGLDSRAYRLDWPTGTTVYEIDQPKVLAYKSTTLAEHGVTPTADRREVPIDLRQDWPPALR 171 (310)
T ss_dssp HHHH---HHTTCCEEEEETCTTCCHHHHSCCCTTCEEEEEECHHHHHHHHHHHHHTTCCCSSEEEEEECCTTSCHHHHHH
T ss_pred HHHH---HHhCCCeEEEeCCCCCchhhhccCCCCcEEEEcCCHHHHHHHHHHHHhcCCCCCCCeEEEecchHhhHHHHHH
Confidence 5555 234567899999998 477798877643 2678899999998621
Q ss_pred -CC-----CCeEEeccccccCChHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCC-----------------C-----
Q 043585 202 -PP-----ADAYFFMLFFHAFGGEDSLKILKKCREAIAGNGQRGKVLIMDIVINEKE-----------------D----- 253 (287)
Q Consensus 202 -p~-----~D~~~l~~vlh~~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~-----------------~----- 253 (287)
.+ .=++++-.+||++++++...+|+.+.+.+.| | ..+++|.+.++.. +
T Consensus 172 ~~g~d~~~Pt~~i~Egvl~Yl~~~~~~~ll~~l~~~~~~---g-s~l~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 247 (310)
T 2uyo_A 172 SAGFDPSARTAWLAEGLLMYLPATAQDGLFTEIGGLSAV---G-SRIAVETSPLHGDEWREQMQLRFRRVSDALGFEQAV 247 (310)
T ss_dssp HTTCCTTSCEEEEECSCGGGSCHHHHHHHHHHHHHTCCT---T-CEEEEECCCTTCSHHHHHHHHHHHHHHC--------
T ss_pred hccCCCCCCEEEEEechHhhCCHHHHHHHHHHHHHhCCC---C-eEEEEEecCCCCcchhHHHHHHHHHHHHHcCCcCCC
Confidence 11 3367888899999999999999999998888 4 4556676654311 0
Q ss_pred ---C-CC-CC-HHHHHHHHHhCCCcEE
Q 043585 254 ---E-DQ-RT-DKEWKTLFLDAGFTCC 274 (287)
Q Consensus 254 ---~-~~-rt-~~e~~~ll~~aGf~~~ 274 (287)
+ .. ++ .++..++|.+.||+.+
T Consensus 248 ~l~~~~~~~~~~~~~~~~f~~~G~~~~ 274 (310)
T 2uyo_A 248 DVQELIYHDENRAVVADWLNRHGWRAT 274 (310)
T ss_dssp ---CCTTCCTTCCCHHHHHTTTTEEEE
T ss_pred CccccccCCCChHHHHHHHHHCcCccc
Confidence 1 11 25 6788899999999887
No 239
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=96.87 E-value=0.00048 Score=64.94 Aligned_cols=111 Identities=11% Similarity=0.120 Sum_probs=74.8
Q ss_pred cccCcceEEEecCcc------------------cccc-hhhhhcCCC------CCCceeeeccCcc-c--CC-CCCeEEe
Q 043585 159 LIERLGSMVDVGGGN------------------VLDL-PHAVANTPQ------TENLKYVADDMFQ-F--IP-PADAYFF 209 (287)
Q Consensus 159 ~~~~~~~vlDvGgG~------------------v~Dl-p~vi~~a~~------~~Ri~~~~gd~~~-~--~p-~~D~~~l 209 (287)
+.....+|||+|+|. .+|. +..++.+++ ..+|.++.+|..+ + .+ .||+|++
T Consensus 102 ~~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~Da~~l~~~~~~~FD~Il~ 181 (456)
T 3m4x_A 102 AAKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVSNAIVTNHAPAELVPHFSGFFDRIVV 181 (456)
T ss_dssp CCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCSSEEEECCCHHHHHHHHTTCEEEEEE
T ss_pred CCCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeCCHHHhhhhccccCCEEEE
Confidence 345678999999998 3454 444444432 4578999999876 2 34 4999987
Q ss_pred cc------cc-------ccCChHHH-------HHHHHHHHHHhcCCCCCcEEEEEeeccCCCCCCCCCCHHHHHHHHHhC
Q 043585 210 ML------FF-------HAFGGEDS-------LKILKKCREAIAGNGQRGKVLIMDIVINEKEDEDQRTDKEWKTLFLDA 269 (287)
Q Consensus 210 ~~------vl-------h~~~d~~~-------~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~~~rt~~e~~~ll~~a 269 (287)
-- ++ ..|+.++. .++|+++.+.|+| ||+|+...+.+.. +-..+....++++.
T Consensus 182 DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~Lkp---GG~LvYsTCs~~~-----eEne~vv~~~l~~~ 253 (456)
T 3m4x_A 182 DAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKN---KGQLIYSTCTFAP-----EENEEIISWLVENY 253 (456)
T ss_dssp ECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEE---EEEEEEEESCCCG-----GGTHHHHHHHHHHS
T ss_pred CCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCC---CcEEEEEEeeccc-----ccCHHHHHHHHHhC
Confidence 21 22 22333322 3889999999999 9999987766543 22467788888988
Q ss_pred CCcEEEEE
Q 043585 270 GFTCCKIT 277 (287)
Q Consensus 270 Gf~~~~~~ 277 (287)
||+++.+.
T Consensus 254 ~~~l~~~~ 261 (456)
T 3m4x_A 254 PVTIEEIP 261 (456)
T ss_dssp SEEEECCC
T ss_pred CCEEEecc
Confidence 87665543
No 240
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=96.85 E-value=0.00097 Score=60.21 Aligned_cols=99 Identities=15% Similarity=0.147 Sum_probs=69.0
Q ss_pred cCcceEEEecCcc--------------cccc-hhhhhcCCC-------CCCceeeeccCcccCCCCCeEEeccccccCCh
Q 043585 161 ERLGSMVDVGGGN--------------VLDL-PHAVANTPQ-------TENLKYVADDMFQFIPPADAYFFMLFFHAFGG 218 (287)
Q Consensus 161 ~~~~~vlDvGgG~--------------v~Dl-p~vi~~a~~-------~~Ri~~~~gd~~~~~p~~D~~~l~~vlh~~~d 218 (287)
....+|||+|||. .+|. |..++.+++ .++++++.+|+++....+|+|++.-.
T Consensus 194 ~~~~~VLDlg~G~G~~~l~a~~~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~~~fD~Vi~dpP------ 267 (336)
T 2yx1_A 194 SLNDVVVDMFAGVGPFSIACKNAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVDVKGNRVIMNLP------ 267 (336)
T ss_dssp CTTCEEEETTCTTSHHHHHTTTSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCCCCEEEEEECCT------
T ss_pred CCCCEEEEccCccCHHHHhccCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhcCCCcEEEECCc------
Confidence 4667999999998 3443 444444432 36899999999984456999988421
Q ss_pred HHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCCCCCCCHHHHHHHHHhC-CCcEEEEE
Q 043585 219 EDSLKILKKCREAIAGNGQRGKVLIMDIVINEKEDEDQRTDKEWKTLFLDA-GFTCCKIT 277 (287)
Q Consensus 219 ~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~~~rt~~e~~~ll~~a-Gf~~~~~~ 277 (287)
.....+++.+.+.|+| ||.+++++.... .++..+.++++ |+.+..+.
T Consensus 268 ~~~~~~l~~~~~~L~~---gG~l~~~~~~~~---------~~~~~~~l~~~~~~~i~~~~ 315 (336)
T 2yx1_A 268 KFAHKFIDKALDIVEE---GGVIHYYTIGKD---------FDKAIKLFEKKCDCEVLEKR 315 (336)
T ss_dssp TTGGGGHHHHHHHEEE---EEEEEEEEEESS---------SHHHHHHHHHHSEEEEEEEE
T ss_pred HhHHHHHHHHHHHcCC---CCEEEEEEeecC---------chHHHHHHHHhcCCcEEEEE
Confidence 1123789999999999 898888876544 34566677766 77765444
No 241
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=96.84 E-value=0.0028 Score=58.41 Aligned_cols=100 Identities=11% Similarity=0.046 Sum_probs=65.3
Q ss_pred CcceEEEecCcc------------------cccc-hhhhhcCCCCCCceeeeccCcccCC--CCCeEEeccccc------
Q 043585 162 RLGSMVDVGGGN------------------VLDL-PHAVANTPQTENLKYVADDMFQFIP--PADAYFFMLFFH------ 214 (287)
Q Consensus 162 ~~~~vlDvGgG~------------------v~Dl-p~vi~~a~~~~Ri~~~~gd~~~~~p--~~D~~~l~~vlh------ 214 (287)
...+|||+|||+ .+|+ |.+++.| .+++++.+|+++..+ .+|+|+..=...
T Consensus 39 ~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a---~~~~~~~~D~~~~~~~~~fD~Ii~NPPy~~~~~~~ 115 (421)
T 2ih2_A 39 RGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP---PWAEGILADFLLWEPGEAFDLILGNPPYGIVGEAS 115 (421)
T ss_dssp TTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC---TTEEEEESCGGGCCCSSCEEEEEECCCCCCBSCTT
T ss_pred CCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC---CCCcEEeCChhhcCccCCCCEEEECcCccCccccc
Confidence 456999999999 1222 2223222 689999999998433 599999842211
Q ss_pred ----cCChHHH-----------------HHHHHHHHHHhcCCCCCcEEEEEeeccCCCCCCCCCCHHHHHHHHHhCCC
Q 043585 215 ----AFGGEDS-----------------LKILKKCREAIAGNGQRGKVLIMDIVINEKEDEDQRTDKEWKTLFLDAGF 271 (287)
Q Consensus 215 ----~~~d~~~-----------------~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~~~rt~~e~~~ll~~aGf 271 (287)
+..++.. ..+++++.+.|+| ||+++++-+---- ...+.+++++++.+.|+
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~---~G~~~~i~p~~~l----~~~~~~~lr~~l~~~~~ 186 (421)
T 2ih2_A 116 KYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKP---GGVLVFVVPATWL----VLEDFALLREFLAREGK 186 (421)
T ss_dssp TCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEE---EEEEEEEEEGGGG----TCGGGHHHHHHHHHHSE
T ss_pred ccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCC---CCEEEEEEChHHh----cCccHHHHHHHHHhcCC
Confidence 1223321 2678999999999 9998877542100 11235788999998887
No 242
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=96.82 E-value=0.0015 Score=59.08 Aligned_cols=104 Identities=10% Similarity=0.104 Sum_probs=72.3
Q ss_pred CcceEEEecCcc----------c------------ccc-hhhhhcCCC-----CCCceeeeccCcccCC--CCCeEEecc
Q 043585 162 RLGSMVDVGGGN----------V------------LDL-PHAVANTPQ-----TENLKYVADDMFQFIP--PADAYFFML 211 (287)
Q Consensus 162 ~~~~vlDvGgG~----------v------------~Dl-p~vi~~a~~-----~~Ri~~~~gd~~~~~p--~~D~~~l~~ 211 (287)
...+|+|+|||+ + +|+ |..++.|+. ..++.+..+|.+.+.+ .+|+|+..-
T Consensus 130 ~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~~~~i~~~D~l~~~~~~~fD~Ii~NP 209 (344)
T 2f8l_A 130 KNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQKMTLLHQDGLANLLVDPVDVVISDL 209 (344)
T ss_dssp SEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTCCCEEEESCTTSCCCCCCEEEEEEEC
T ss_pred CCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCCCceEEECCCCCccccCCccEEEECC
Confidence 457999999999 1 121 334444432 3368999999998644 499999988
Q ss_pred ccccCChHHH----------------HHHHHHHHHHhcCCCCCcEEEEEeeccCCCCCCCCCCHHHHHHHHHhCCCc
Q 043585 212 FFHAFGGEDS----------------LKILKKCREAIAGNGQRGKVLIMDIVINEKEDEDQRTDKEWKTLFLDAGFT 272 (287)
Q Consensus 212 vlh~~~d~~~----------------~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~~~rt~~e~~~ll~~aGf~ 272 (287)
.++.++.++. ..+++++.+.|+| ||+++++-+---- .....+++++++.+.|+.
T Consensus 210 Pfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~---gG~~~~v~p~~~~----~~~~~~~ir~~l~~~~~~ 279 (344)
T 2f8l_A 210 PVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKP---GGYLFFLVPDAMF----GTSDFAKVDKFIKKNGHI 279 (344)
T ss_dssp CCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEE---EEEEEEEEEGGGG----GSTTHHHHHHHHHHHEEE
T ss_pred CCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCC---CCEEEEEECchhc----CCchHHHHHHHHHhCCeE
Confidence 8877765542 2689999999999 8988877532100 112368889999888763
No 243
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=96.80 E-value=0.0008 Score=56.59 Aligned_cols=76 Identities=18% Similarity=0.222 Sum_probs=54.5
Q ss_pred ccCcceEEEecCcc---------cc-------------cc-hhhhhcCCC-----------CCCceeeeccCcccC----
Q 043585 160 IERLGSMVDVGGGN---------VL-------------DL-PHAVANTPQ-----------TENLKYVADDMFQFI---- 201 (287)
Q Consensus 160 ~~~~~~vlDvGgG~---------v~-------------Dl-p~vi~~a~~-----------~~Ri~~~~gd~~~~~---- 201 (287)
.....+|||||||. .. |. |..++.+++ .++++++.+|+.+..
T Consensus 78 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 157 (227)
T 2pbf_A 78 LKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEEK 157 (227)
T ss_dssp SCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHHH
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccccC
Confidence 34567999999998 11 11 334444432 258999999998743
Q ss_pred C---CCCeEEeccccccCChHHHHHHHHHHHHHhcCCCCCcEEEEEee
Q 043585 202 P---PADAYFFMLFFHAFGGEDSLKILKKCREAIAGNGQRGKVLIMDI 246 (287)
Q Consensus 202 p---~~D~~~l~~vlh~~~d~~~~~iL~~~~~al~~~~~~g~lli~e~ 246 (287)
+ .||+|++...+|.. ++++++.|+| ||++++.-.
T Consensus 158 ~~~~~fD~I~~~~~~~~~--------~~~~~~~Lkp---gG~lv~~~~ 194 (227)
T 2pbf_A 158 KELGLFDAIHVGASASEL--------PEILVDLLAE---NGKLIIPIE 194 (227)
T ss_dssp HHHCCEEEEEECSBBSSC--------CHHHHHHEEE---EEEEEEEEE
T ss_pred ccCCCcCEEEECCchHHH--------HHHHHHhcCC---CcEEEEEEc
Confidence 2 49999999999864 4677889999 899888643
No 244
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=96.76 E-value=0.0016 Score=57.77 Aligned_cols=67 Identities=15% Similarity=0.263 Sum_probs=45.8
Q ss_pred cccCcceEEEecCcc---------------cccc-hhhhhcCCC------CCCceeeeccCcc-cCCCCCeEEecccccc
Q 043585 159 LIERLGSMVDVGGGN---------------VLDL-PHAVANTPQ------TENLKYVADDMFQ-FIPPADAYFFMLFFHA 215 (287)
Q Consensus 159 ~~~~~~~vlDvGgG~---------------v~Dl-p~vi~~a~~------~~Ri~~~~gd~~~-~~p~~D~~~l~~vlh~ 215 (287)
......+|||||||. .+|. +..++.+++ .++++++.+|+.+ +.+.+|+|++ +.-+.
T Consensus 39 ~~~~~~~VLDiG~G~G~lt~~La~~~~~v~~vDi~~~~~~~a~~~~~~~~~~~v~~~~~D~~~~~~~~~D~Vv~-n~py~ 117 (299)
T 2h1r_A 39 KIKSSDIVLEIGCGTGNLTVKLLPLAKKVITIDIDSRMISEVKKRCLYEGYNNLEVYEGDAIKTVFPKFDVCTA-NIPYK 117 (299)
T ss_dssp CCCTTCEEEEECCTTSTTHHHHTTTSSEEEEECSCHHHHHHHHHHHHHTTCCCEEC----CCSSCCCCCSEEEE-ECCGG
T ss_pred CCCCcCEEEEEcCcCcHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECchhhCCcccCCEEEE-cCCcc
Confidence 345667999999999 5665 556655542 3689999999988 5567998876 56667
Q ss_pred CChHHHHHHHH
Q 043585 216 FGGEDSLKILK 226 (287)
Q Consensus 216 ~~d~~~~~iL~ 226 (287)
|+.+...++|+
T Consensus 118 ~~~~~~~~ll~ 128 (299)
T 2h1r_A 118 ISSPLIFKLIS 128 (299)
T ss_dssp GHHHHHHHHHH
T ss_pred cccHHHHHHHh
Confidence 88877777773
No 245
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=96.67 E-value=0.013 Score=53.35 Aligned_cols=83 Identities=12% Similarity=0.125 Sum_probs=60.7
Q ss_pred eeeccCcc-cCC--CCCeEEeccccccCCh-------------------------------HHHHHHHHHHHHHhcCCCC
Q 043585 192 YVADDMFQ-FIP--PADAYFFMLFFHAFGG-------------------------------EDSLKILKKCREAIAGNGQ 237 (287)
Q Consensus 192 ~~~gd~~~-~~p--~~D~~~l~~vlh~~~d-------------------------------~~~~~iL~~~~~al~~~~~ 237 (287)
-++|.|+. .+| ..|+++.+..||=.++ .|-..+|+..++.|+|
T Consensus 125 gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~p--- 201 (359)
T 1m6e_X 125 GVPGSFYGRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVP--- 201 (359)
T ss_dssp EEESCSSSCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCT---
T ss_pred ecchhhhhccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcC---
Confidence 36688988 677 3999999999995443 1334569999999999
Q ss_pred CcEEEEEeeccCCCCC-----------------------------------C-CCCCHHHHHHHHHhCCC-cEEEEE
Q 043585 238 RGKVLIMDIVINEKED-----------------------------------E-DQRTDKEWKTLFLDAGF-TCCKIT 277 (287)
Q Consensus 238 ~g~lli~e~~~~~~~~-----------------------------------~-~~rt~~e~~~ll~~aGf-~~~~~~ 277 (287)
||++++.-.-.+.... + .-+|.+|++++++++|+ ++..+.
T Consensus 202 GG~mvl~~~gr~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~ek~d~f~~P~y~ps~~E~~~~ie~~G~F~i~~~e 278 (359)
T 1m6e_X 202 GGRMVLTILGRRSEDRASTECCLIWQLLAMALNQMVSEGLIEEEKMDKFNIPQYTPSPTEVEAEILKEGSFLIDHIE 278 (359)
T ss_dssp TCEEEEEEEECSSSSSSSTTTSTTTHHHHHHHHHHHHTTCSCCSTTGGGCCCCBCCCSHHHHHHHHHTTTBCCEEEE
T ss_pred CceEEEEEecCCCCCccccchHHHHHHHHHHHHHHHHccccchhhhhccCCCccCCCHHHHHHHHHHcCCceEEEEE
Confidence 9999876554433210 0 56799999999999965 665543
No 246
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=96.64 E-value=0.0013 Score=56.43 Aligned_cols=84 Identities=10% Similarity=0.163 Sum_probs=57.2
Q ss_pred cccCcceEEEecCcc---------------cccc-hhhhhcCCC----CCCceeeeccCcc-cCCC-CCeEEeccccccC
Q 043585 159 LIERLGSMVDVGGGN---------------VLDL-PHAVANTPQ----TENLKYVADDMFQ-FIPP-ADAYFFMLFFHAF 216 (287)
Q Consensus 159 ~~~~~~~vlDvGgG~---------------v~Dl-p~vi~~a~~----~~Ri~~~~gd~~~-~~p~-~D~~~l~~vlh~~ 216 (287)
......+|||||||. .+|+ +..++.+++ .++++++.+|+.+ +++. ...+++++.-++.
T Consensus 26 ~~~~~~~VLDiG~G~G~~~~~l~~~~~~v~~id~~~~~~~~a~~~~~~~~~v~~~~~D~~~~~~~~~~~f~vv~n~Py~~ 105 (245)
T 1yub_A 26 NLKETDTVYEIGTGKGHLTTKLAKISKQVTSIELDSHLFNLSSEKLKLNTRVTLIHQDILQFQFPNKQRYKIVGNIPYHL 105 (245)
T ss_dssp CCCSSEEEEECSCCCSSCSHHHHHHSSEEEESSSSCSSSSSSSCTTTTCSEEEECCSCCTTTTCCCSSEEEEEEECCSSS
T ss_pred CCCCCCEEEEEeCCCCHHHHHHHHhCCeEEEEECCHHHHHHHHHHhccCCceEEEECChhhcCcccCCCcEEEEeCCccc
Confidence 455678999999999 5665 556666654 3689999999988 5542 2225556655555
Q ss_pred ChHHHHHHH--------------HHHHHHhcCCCCCcEEEEEe
Q 043585 217 GGEDSLKIL--------------KKCREAIAGNGQRGKVLIMD 245 (287)
Q Consensus 217 ~d~~~~~iL--------------~~~~~al~~~~~~g~lli~e 245 (287)
+.+....++ +.+.+.|+| ||++.++.
T Consensus 106 ~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~---~G~l~v~~ 145 (245)
T 1yub_A 106 STQIIKKVVFESRASDIYLIVEEGFYKRTLDI---HRTLGLLL 145 (245)
T ss_dssp CHHHHHHHHHHCCCEEEEEEEESSHHHHHHCG---GGSHHHHT
T ss_pred cHHHHHHHHhCCCCCeEEEEeeHHHHHHHhCC---CCchhhhh
Confidence 555444444 558888999 88876644
No 247
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=96.62 E-value=0.0019 Score=60.22 Aligned_cols=107 Identities=9% Similarity=0.079 Sum_probs=69.9
Q ss_pred ccCcceEEEecCcc-----------------cccc-hhhhhcCCC-----CCCceeeeccCccc---CC--CCCeEEe--
Q 043585 160 IERLGSMVDVGGGN-----------------VLDL-PHAVANTPQ-----TENLKYVADDMFQF---IP--PADAYFF-- 209 (287)
Q Consensus 160 ~~~~~~vlDvGgG~-----------------v~Dl-p~vi~~a~~-----~~Ri~~~~gd~~~~---~p--~~D~~~l-- 209 (287)
.....+|||+|||. .+|. +..++.+++ .-+++++.+|+.+. ++ .||+|++
T Consensus 244 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~~~~~~~~D~~~~~~~~~~~~fD~Vl~D~ 323 (429)
T 1sqg_A 244 PQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDA 323 (429)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTTCTHHHHTTCCEEEEEEEC
T ss_pred CCCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCCCeEEEeCchhhchhhcccCCCCEEEEeC
Confidence 34567999999998 2333 333333321 33588999999873 33 4999996
Q ss_pred ----ccccccCCh-------HHH-------HHHHHHHHHHhcCCCCCcEEEEEeeccCCCCCCCCCCHHHHHHHHHhC-C
Q 043585 210 ----MLFFHAFGG-------EDS-------LKILKKCREAIAGNGQRGKVLIMDIVINEKEDEDQRTDKEWKTLFLDA-G 270 (287)
Q Consensus 210 ----~~vlh~~~d-------~~~-------~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~~~rt~~e~~~ll~~a-G 270 (287)
..+++..++ ++. ..+|+++.+.|+| ||++++.++.+.. +-..+....++++. +
T Consensus 324 Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~Lkp---GG~lvystcs~~~-----~ene~~v~~~l~~~~~ 395 (429)
T 1sqg_A 324 PCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKT---GGTLVYATCSVLP-----EENSLQIKAFLQRTAD 395 (429)
T ss_dssp CCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEE---EEEEEEEESCCCG-----GGTHHHHHHHHHHCTT
T ss_pred CCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCC---CCEEEEEECCCCh-----hhHHHHHHHHHHhCCC
Confidence 234444333 222 5889999999999 9999998876543 12356677777765 6
Q ss_pred CcEE
Q 043585 271 FTCC 274 (287)
Q Consensus 271 f~~~ 274 (287)
|+.+
T Consensus 396 ~~~~ 399 (429)
T 1sqg_A 396 AELC 399 (429)
T ss_dssp CEEC
T ss_pred CEEe
Confidence 7654
No 248
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=96.57 E-value=0.0057 Score=56.25 Aligned_cols=82 Identities=13% Similarity=0.248 Sum_probs=59.8
Q ss_pred eeccCcc-cCC--CCCeEEeccccccCChHH-------------------------H------------HHHHHHHHHHh
Q 043585 193 VADDMFQ-FIP--PADAYFFMLFFHAFGGED-------------------------S------------LKILKKCREAI 232 (287)
Q Consensus 193 ~~gd~~~-~~p--~~D~~~l~~vlh~~~d~~-------------------------~------------~~iL~~~~~al 232 (287)
++|.|+. .+| .+|+++.+..||=.++.. + ..+|+..++.|
T Consensus 136 vpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL~~Ra~eL 215 (384)
T 2efj_A 136 MPGSFYSRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLRIHSEEL 215 (384)
T ss_dssp CCSCTTSCCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHHHHHHHHE
T ss_pred cchhhhhccCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 5678888 577 399999999999544321 2 23388889999
Q ss_pred cCCCCCcEEEEEeeccCCC--C-C----------------------------C-CCCCHHHHHHHHHhC-CCcEEEEE
Q 043585 233 AGNGQRGKVLIMDIVINEK--E-D----------------------------E-DQRTDKEWKTLFLDA-GFTCCKIT 277 (287)
Q Consensus 233 ~~~~~~g~lli~e~~~~~~--~-~----------------------------~-~~rt~~e~~~ll~~a-Gf~~~~~~ 277 (287)
+| ||++++.-.-.+.. . . + .-+|.+|++++++++ +|++..+.
T Consensus 216 ~p---GG~mvl~~~gr~~~~~~~~~~~~l~~al~~lv~eGli~~ek~dsf~~P~y~ps~~E~~~~le~~g~F~i~~le 290 (384)
T 2efj_A 216 IS---RGRMLLTFICKEDEFDHPNSMDLLEMSINDLVIEGHLEEEKLDSFNVPIYAPSTEEVKRIVEEEGSFEILYLE 290 (384)
T ss_dssp EE---EEEEEEEEECCCTTTCCCCHHHHHHHHHHHHHHHTSSCHHHHHTCCCSBCCCCHHHHHHHHHHHCSEEEEEEE
T ss_pred cc---CCeEEEEEecCCCcccCcccHHHHHHHHHHHHHhCCcchhhhcccCCcccCCCHHHHHHHHHHcCCceEEEEE
Confidence 99 99998876555443 1 1 0 557999999999998 47877654
No 249
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=96.50 E-value=0.0015 Score=63.95 Aligned_cols=113 Identities=17% Similarity=0.194 Sum_probs=71.9
Q ss_pred ChhhhhccCchHHHHHHHHHHhcccchhhHhhhcccccccCcceEEEecCcc--c-------------------ccchhh
Q 043585 122 KHWEIMSQNPRLSQRFNQAMVNDSEMATFIVKDCCRTLIERLGSMVDVGGGN--V-------------------LDLPHA 180 (287)
Q Consensus 122 ~~~e~~~~~~~~~~~f~~aM~~~s~~~~~~~~~~~~~~~~~~~~vlDvGgG~--v-------------------~Dlp~v 180 (287)
..||.+++||-.-..|.+|+...- ...+..- . ...+...|+|||+|+ + ++--++
T Consensus 322 ~tYevFEkD~vKy~~Ye~AI~~Al---~d~~~~~-~-~~~~~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp~ 396 (637)
T 4gqb_A 322 QTYEVFEKDPIKYSQYQQAIYKCL---LDRVPEE-E-KDTNVQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNPN 396 (637)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHH---HHHSCGG-G-TTTCEEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCHH
T ss_pred hhhhhhcCChhhHHHHHHHHHHHH---HHhhhhc-c-ccCCCcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCHH
Confidence 578999999988888888886521 0111111 0 123456899999999 1 111112
Q ss_pred hhcCCC-------CCCceeeeccCcc-cCCC-CCeEEeccccccCChHHHHHHHHHHHHHhcCCCCCcEEE
Q 043585 181 VANTPQ-------TENLKYVADDMFQ-FIPP-ADAYFFMLFFHAFGGEDSLKILKKCREAIAGNGQRGKVL 242 (287)
Q Consensus 181 i~~a~~-------~~Ri~~~~gd~~~-~~p~-~D~~~l~~vlh~~~d~~~~~iL~~~~~al~~~~~~g~ll 242 (287)
...+++ .++|+++.||+.+ ..|. +|+++.=+.=.....|-...+|....+-|+| ||.++
T Consensus 397 A~~a~~~v~~N~~~dkVtVI~gd~eev~LPEKVDIIVSEwMG~fLl~E~mlevL~Ardr~LKP---gGimi 464 (637)
T 4gqb_A 397 AVVTLENWQFEEWGSQVTVVSSDMREWVAPEKADIIVSELLGSFADNELSPECLDGAQHFLKD---DGVSI 464 (637)
T ss_dssp HHHHHHHHHHHTTGGGEEEEESCTTTCCCSSCEEEEECCCCBTTBGGGCHHHHHHHHGGGEEE---EEEEE
T ss_pred HHHHHHHHHhccCCCeEEEEeCcceeccCCcccCEEEEEcCcccccccCCHHHHHHHHHhcCC---CcEEc
Confidence 222221 7899999999999 7784 9998765543333444455667666788999 77653
No 250
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=96.33 E-value=0.0095 Score=55.59 Aligned_cols=103 Identities=12% Similarity=0.158 Sum_probs=64.8
Q ss_pred ccCcceEEEecCcc---------------cccc-hhhhhcCCC------CCCceeeeccCcccC-----C--CCCeEEec
Q 043585 160 IERLGSMVDVGGGN---------------VLDL-PHAVANTPQ------TENLKYVADDMFQFI-----P--PADAYFFM 210 (287)
Q Consensus 160 ~~~~~~vlDvGgG~---------------v~Dl-p~vi~~a~~------~~Ri~~~~gd~~~~~-----p--~~D~~~l~ 210 (287)
..+..+|||+|||. .+|. |..++.|++ .++++|+.+|+.+.+ + .+|+|++.
T Consensus 284 ~~~~~~VLDlgcG~G~~~~~la~~~~~V~gvD~s~~al~~A~~n~~~~~~~~v~f~~~d~~~~l~~~~~~~~~fD~Vv~d 363 (433)
T 1uwv_A 284 VQPEDRVLDLFCGMGNFTLPLATQAASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVLLD 363 (433)
T ss_dssp CCTTCEEEEESCTTTTTHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCCSSSGGGTTCCSEEEEC
T ss_pred CCCCCEEEECCCCCCHHHHHHHhhCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEECCHHHHhhhhhhhcCCCCEEEEC
Confidence 34567999999999 4565 666666653 358999999998832 2 48999872
Q ss_pred cccccCChHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCCCCCCCHHHHHHHHHhCCCcEEEEEecC
Q 043585 211 LFFHAFGGEDSLKILKKCREAIAGNGQRGKVLIMDIVINEKEDEDQRTDKEWKTLFLDAGFTCCKITTMF 280 (287)
Q Consensus 211 ~vlh~~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~~~rt~~e~~~ll~~aGf~~~~~~~~~ 280 (287)
-+-..+..+++.+. .++| ++ ++.+... -.|...-..+|.+.||+..++.+..
T Consensus 364 -----PPr~g~~~~~~~l~-~~~p---~~-ivyvsc~--------p~tlard~~~l~~~Gy~~~~~~~~d 415 (433)
T 1uwv_A 364 -----PARAGAAGVMQQII-KLEP---IR-IVYVSCN--------PATLARDSEALLKAGYTIARLAMLD 415 (433)
T ss_dssp -----CCTTCCHHHHHHHH-HHCC---SE-EEEEESC--------HHHHHHHHHHHHHTTCEEEEEEEEC
T ss_pred -----CCCccHHHHHHHHH-hcCC---Ce-EEEEECC--------hHHHHhhHHHHHHCCcEEEEEEEec
Confidence 22222224555554 3677 44 4443221 1134444567788899998877763
No 251
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=96.27 E-value=0.001 Score=61.27 Aligned_cols=82 Identities=11% Similarity=0.098 Sum_probs=58.4
Q ss_pred CcceEEEecCcc----------------cccc-hhhhhcCCC-------CCCceeeeccCcccC------C-CCCeEEec
Q 043585 162 RLGSMVDVGGGN----------------VLDL-PHAVANTPQ-------TENLKYVADDMFQFI------P-PADAYFFM 210 (287)
Q Consensus 162 ~~~~vlDvGgG~----------------v~Dl-p~vi~~a~~-------~~Ri~~~~gd~~~~~------p-~~D~~~l~ 210 (287)
+..+|||+|||. .+|. |..++.+++ .++++++.+|+++.. + .+|+|++-
T Consensus 217 ~~~~VLDl~~G~G~~~~~la~~g~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~~~~~fD~Vi~d 296 (396)
T 2as0_A 217 PGDRVLDVFTYTGGFAIHAAIAGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDIVVLD 296 (396)
T ss_dssp TTCEEEETTCTTTHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCCeEEEecCCCCHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHhhCCCCCEEEEC
Confidence 668999999998 4555 556665543 238999999998731 2 49999984
Q ss_pred cccccCCh-------HHHHHHHHHHHHHhcCCCCCcEEEEEee
Q 043585 211 LFFHAFGG-------EDSLKILKKCREAIAGNGQRGKVLIMDI 246 (287)
Q Consensus 211 ~vlh~~~d-------~~~~~iL~~~~~al~~~~~~g~lli~e~ 246 (287)
-.....+. .....+++++.+.|+| ||.+++...
T Consensus 297 pP~~~~~~~~~~~~~~~~~~~l~~~~~~Lkp---gG~lv~~~~ 336 (396)
T 2as0_A 297 PPAFVQHEKDLKAGLRAYFNVNFAGLNLVKD---GGILVTCSC 336 (396)
T ss_dssp CCCSCSSGGGHHHHHHHHHHHHHHHHTTEEE---EEEEEEEEC
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHhcCC---CcEEEEEEC
Confidence 32222221 4567899999999999 898888764
No 252
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=96.26 E-value=0.0021 Score=59.08 Aligned_cols=109 Identities=15% Similarity=0.133 Sum_probs=68.8
Q ss_pred cCcceEEEecCcc----------------cccc-hhhhhcCCC-------CC-CceeeeccCcccC------C-CCCeEE
Q 043585 161 ERLGSMVDVGGGN----------------VLDL-PHAVANTPQ-------TE-NLKYVADDMFQFI------P-PADAYF 208 (287)
Q Consensus 161 ~~~~~vlDvGgG~----------------v~Dl-p~vi~~a~~-------~~-Ri~~~~gd~~~~~------p-~~D~~~ 208 (287)
.+..+|||+|||+ .+|. |..++.|++ .+ +++++.+|+++.. + .+|+|+
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~ga~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~Ii 290 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDIII 290 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred cCCCeEEEEeeccCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHHhCCCccEEE
Confidence 5567999999999 4555 556665543 23 8999999998732 2 489999
Q ss_pred ecccc-----ccCC--hHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCCCCCCCHHHHHH----HHHhCCCcEEEEE
Q 043585 209 FMLFF-----HAFG--GEDSLKILKKCREAIAGNGQRGKVLIMDIVINEKEDEDQRTDKEWKT----LFLDAGFTCCKIT 277 (287)
Q Consensus 209 l~~vl-----h~~~--d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~~~rt~~e~~~----ll~~aGf~~~~~~ 277 (287)
+--.. +... .+...++++.+.+.|+| ||.|++..... ..+.+++.+ .+.++|.++.+..
T Consensus 291 ~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~p---gG~l~~~~~~~-------~~~~~~~~~~i~~~~~~~g~~~~~~~ 360 (385)
T 2b78_A 291 IDPPSFARNKKEVFSVSKDYHKLIRQGLEILSE---NGLIIASTNAA-------NMTVSQFKKQIEKGFGKQKHTYLDLQ 360 (385)
T ss_dssp ECCCCC-----CCCCHHHHHHHHHHHHHHTEEE---EEEEEEEECCT-------TSCHHHHHHHHHHHHTTCCCEEEEEE
T ss_pred ECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCC---CcEEEEEeCCC-------cCCHHHHHHHHHHHHHHcCCcEEEeC
Confidence 83222 1111 22345688999999999 88877654221 123445544 4456688755544
Q ss_pred ec
Q 043585 278 TM 279 (287)
Q Consensus 278 ~~ 279 (287)
..
T Consensus 361 ~~ 362 (385)
T 2b78_A 361 QL 362 (385)
T ss_dssp CC
T ss_pred CC
Confidence 33
No 253
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=96.25 E-value=0.0016 Score=59.75 Aligned_cols=107 Identities=12% Similarity=0.009 Sum_probs=68.9
Q ss_pred CcceEEEecCcc---------------cccc-hhhhhcCCC------CCCceeeeccCcccC------C-CCCeEEeccc
Q 043585 162 RLGSMVDVGGGN---------------VLDL-PHAVANTPQ------TENLKYVADDMFQFI------P-PADAYFFMLF 212 (287)
Q Consensus 162 ~~~~vlDvGgG~---------------v~Dl-p~vi~~a~~------~~Ri~~~~gd~~~~~------p-~~D~~~l~~v 212 (287)
+..+|||+|||. .+|. |..++.+++ .++++++.+|+++.. + .+|+|++--.
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~~~~v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~~~~~~~~~~~~~~fD~Ii~dpP 288 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALGFREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEKEGERFDLVVLDPP 288 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHHEEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHHTTCCEEEEEECCC
T ss_pred CCCeEEEeeeccCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEECCHHHHHHHHHhcCCCeeEEEECCC
Confidence 567999999999 5665 666666653 345999999998731 3 4899997332
Q ss_pred cccCCh-------HHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCCCCCCCHHHHHHHHHhCCCcEE
Q 043585 213 FHAFGG-------EDSLKILKKCREAIAGNGQRGKVLIMDIVINEKEDEDQRTDKEWKTLFLDAGFTCC 274 (287)
Q Consensus 213 lh~~~d-------~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~~~rt~~e~~~ll~~aGf~~~ 274 (287)
....+. +....+++.+.+.|+| ||.+++........ ...-.+.+.+.+.++|.+..
T Consensus 289 ~~~~~~~~~~~~~~~~~~~l~~~~~~Lkp---gG~l~~~~~~~~~~---~~~~~~~i~~~~~~~g~~~~ 351 (382)
T 1wxx_A 289 AFAKGKKDVERAYRAYKEVNLRAIKLLKE---GGILATASCSHHMT---EPLFYAMVAEAAQDAHRLLR 351 (382)
T ss_dssp CSCCSTTSHHHHHHHHHHHHHHHHHTEEE---EEEEEEEECCTTSC---HHHHHHHHHHHHHHTTCCEE
T ss_pred CCCCChhHHHHHHHHHHHHHHHHHHhcCC---CCEEEEEECCCCCC---HHHHHHHHHHHHHHcCCeEE
Confidence 212111 4456799999999999 89888876432210 00112334456667775543
No 254
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=96.19 E-value=0.0041 Score=53.39 Aligned_cols=67 Identities=15% Similarity=0.285 Sum_probs=46.3
Q ss_pred cccCcceEEEecCcc---------------cccc-hhhhhcCCC----CCCceeeeccCcc-cCCC-CCeEEeccccccC
Q 043585 159 LIERLGSMVDVGGGN---------------VLDL-PHAVANTPQ----TENLKYVADDMFQ-FIPP-ADAYFFMLFFHAF 216 (287)
Q Consensus 159 ~~~~~~~vlDvGgG~---------------v~Dl-p~vi~~a~~----~~Ri~~~~gd~~~-~~p~-~D~~~l~~vlh~~ 216 (287)
......+|||||||. .+|. +..++.+++ .++++++.+|+.+ +++. .+..++++.-+++
T Consensus 27 ~~~~~~~VLDiG~G~G~lt~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~D~~~~~~~~~~~~~vv~nlPy~~ 106 (244)
T 1qam_A 27 RLNEHDNIFEIGSGKGHFTLELVQRCNFVTAIEIDHKLCKTTENKLVDHDNFQVLNKDILQFKFPKNQSYKIFGNIPYNI 106 (244)
T ss_dssp CCCTTCEEEEECCTTSHHHHHHHHHSSEEEEECSCHHHHHHHHHHTTTCCSEEEECCCGGGCCCCSSCCCEEEEECCGGG
T ss_pred CCCCCCEEEEEeCCchHHHHHHHHcCCeEEEEECCHHHHHHHHHhhccCCCeEEEEChHHhCCcccCCCeEEEEeCCccc
Confidence 345678999999999 5665 555555542 4789999999998 5653 4556777777776
Q ss_pred ChHHHHHHH
Q 043585 217 GGEDSLKIL 225 (287)
Q Consensus 217 ~d~~~~~iL 225 (287)
+.+-...++
T Consensus 107 ~~~~l~~~l 115 (244)
T 1qam_A 107 STDIIRKIV 115 (244)
T ss_dssp HHHHHHHHH
T ss_pred CHHHHHHHH
Confidence 655444444
No 255
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=95.98 E-value=0.0053 Score=60.92 Aligned_cols=103 Identities=13% Similarity=0.177 Sum_probs=68.2
Q ss_pred CcceEEEecCcc----------------cccc-hhhhhcCCC-------C-CCceeeeccCcccC---C-CCCeEEeccc
Q 043585 162 RLGSMVDVGGGN----------------VLDL-PHAVANTPQ-------T-ENLKYVADDMFQFI---P-PADAYFFMLF 212 (287)
Q Consensus 162 ~~~~vlDvGgG~----------------v~Dl-p~vi~~a~~-------~-~Ri~~~~gd~~~~~---p-~~D~~~l~~v 212 (287)
...+|||+|||+ .+|+ |..++.+++ . ++++++.+|.++.+ . .||+|++--.
T Consensus 539 ~g~~VLDlg~GtG~~sl~aa~~ga~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~~~~~fD~Ii~DPP 618 (703)
T 3v97_A 539 KGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDPP 618 (703)
T ss_dssp TTCEEEEESCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHHCCCCEEEEEECCC
T ss_pred CCCcEEEeeechhHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHhcCCCccEEEECCc
Confidence 467999999999 4665 556666553 2 58999999998832 2 4999998332
Q ss_pred c--------ccCC-hHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCCCCCCCHHHHHHHHHhCCCcEEEE
Q 043585 213 F--------HAFG-GEDSLKILKKCREAIAGNGQRGKVLIMDIVINEKEDEDQRTDKEWKTLFLDAGFTCCKI 276 (287)
Q Consensus 213 l--------h~~~-d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~~~rt~~e~~~ll~~aGf~~~~~ 276 (287)
. +.|. ..+-.++++.+.+.|+| ||.|++...... .... .+.|+++||+...+
T Consensus 619 ~f~~~~~~~~~~~~~~~~~~ll~~a~~~Lkp---gG~L~~s~~~~~-----~~~~----~~~l~~~g~~~~~i 679 (703)
T 3v97_A 619 TFSNSKRMEDAFDVQRDHLALMKDLKRLLRA---GGTIMFSNNKRG-----FRMD----LDGLAKLGLKAQEI 679 (703)
T ss_dssp SBC-------CCBHHHHHHHHHHHHHHHEEE---EEEEEEEECCTT-----CCCC----HHHHHHTTEEEEEC
T ss_pred cccCCccchhHHHHHHHHHHHHHHHHHhcCC---CcEEEEEECCcc-----cccC----HHHHHHcCCceeee
Confidence 1 1111 23457899999999999 888885443211 1112 45678889874443
No 256
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=95.86 E-value=0.01 Score=54.82 Aligned_cols=103 Identities=10% Similarity=0.008 Sum_probs=65.0
Q ss_pred CcceEEEecCcc---------------cccc-hhhhhcCCC-----CCCceeeeccCcccC---C-CCCeEEeccccccC
Q 043585 162 RLGSMVDVGGGN---------------VLDL-PHAVANTPQ-----TENLKYVADDMFQFI---P-PADAYFFMLFFHAF 216 (287)
Q Consensus 162 ~~~~vlDvGgG~---------------v~Dl-p~vi~~a~~-----~~Ri~~~~gd~~~~~---p-~~D~~~l~~vlh~~ 216 (287)
...+|||+|||+ .+|+ |..++.+++ .-...+..+|.++.. + .||+|++--.....
T Consensus 214 ~g~~VLDlg~GtG~~sl~~a~~ga~V~avDis~~al~~a~~n~~~ng~~~~~~~~D~~~~l~~~~~~fD~Ii~dpP~f~~ 293 (393)
T 4dmg_A 214 PGERVLDVYSYVGGFALRAARKGAYALAVDKDLEALGVLDQAALRLGLRVDIRHGEALPTLRGLEGPFHHVLLDPPTLVK 293 (393)
T ss_dssp TTCEEEEESCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCCCEEEESCHHHHHHTCCCCEEEEEECCCCCCS
T ss_pred CCCeEEEcccchhHHHHHHHHcCCeEEEEECCHHHHHHHHHHHHHhCCCCcEEEccHHHHHHHhcCCCCEEEECCCcCCC
Confidence 378999999999 5666 556666553 112346688988732 2 39999874322111
Q ss_pred Ch-------HHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCCCCCCCHHHHHHHH----HhCCCcEE
Q 043585 217 GG-------EDSLKILKKCREAIAGNGQRGKVLIMDIVINEKEDEDQRTDKEWKTLF----LDAGFTCC 274 (287)
Q Consensus 217 ~d-------~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~~~rt~~e~~~ll----~~aGf~~~ 274 (287)
+. ..-.++++.+.+.|+| ||.|+++..... .+.++|.+.+ .++|.+..
T Consensus 294 ~~~~~~~~~~~~~~ll~~a~~~Lkp---GG~Lv~~s~s~~-------~~~~~f~~~v~~a~~~~g~~~~ 352 (393)
T 4dmg_A 294 RPEELPAMKRHLVDLVREALRLLAE---EGFLWLSSCSYH-------LRLEDLLEVARRAAADLGRRLR 352 (393)
T ss_dssp SGGGHHHHHHHHHHHHHHHHHTEEE---EEEEEEEECCTT-------SCHHHHHHHHHHHHHHHTCCEE
T ss_pred CHHHHHHHHHHHHHHHHHHHHhcCC---CCEEEEEECCCC-------CCHHHHHHHHHHHHHHhCCeEE
Confidence 11 2235789999999999 999887765433 2344555444 45566543
No 257
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=95.80 E-value=0.0029 Score=58.26 Aligned_cols=108 Identities=14% Similarity=0.023 Sum_probs=67.6
Q ss_pred cCcceEEEecCcc----------------cccc-hhhhhcCCC------C-C-CceeeeccCcccC------C-CCCeEE
Q 043585 161 ERLGSMVDVGGGN----------------VLDL-PHAVANTPQ------T-E-NLKYVADDMFQFI------P-PADAYF 208 (287)
Q Consensus 161 ~~~~~vlDvGgG~----------------v~Dl-p~vi~~a~~------~-~-Ri~~~~gd~~~~~------p-~~D~~~ 208 (287)
.+..+|||+|||. .+|. |..++.+++ . + +++++.+|+++.. + .+|+|+
T Consensus 219 ~~~~~VLDl~cG~G~~sl~la~~g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~~~~fD~Ii 298 (396)
T 3c0k_A 219 VENKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVIV 298 (396)
T ss_dssp CTTCEEEEESCTTCSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred hCCCeEEEeeccCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHhcCCCCCEEE
Confidence 4567999999999 4565 556665543 2 3 8999999998732 2 499998
Q ss_pred ecccc--------ccCChHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCCCCCCCHHHHHHHHHhCCCcEEE
Q 043585 209 FMLFF--------HAFGGEDSLKILKKCREAIAGNGQRGKVLIMDIVINEKEDEDQRTDKEWKTLFLDAGFTCCK 275 (287)
Q Consensus 209 l~~vl--------h~~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~~~rt~~e~~~ll~~aGf~~~~ 275 (287)
+--.. +... .....++.++.+.|+| ||.+++...-.... ...-.+.+.+.+.++|++...
T Consensus 299 ~dpP~~~~~~~~~~~~~-~~~~~~l~~~~~~Lkp---gG~l~~~~~~~~~~---~~~~~~~i~~~~~~~g~~~~~ 366 (396)
T 3c0k_A 299 MDPPKFVENKSQLMGAC-RGYKDINMLAIQLLNE---GGILLTFSCSGLMT---SDLFQKIIADAAIDAGRDVQF 366 (396)
T ss_dssp ECCSSTTTCSSSSSCCC-THHHHHHHHHHHTEEE---EEEEEEEECCTTCC---HHHHHHHHHHHHHHHTCCEEE
T ss_pred ECCCCCCCChhHHHHHH-HHHHHHHHHHHHhcCC---CcEEEEEeCCCcCC---HHHHHHHHHHHHHHcCCeEEE
Confidence 85321 1111 3457899999999999 88877754322110 011122334456677865433
No 258
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=95.78 E-value=0.0072 Score=53.56 Aligned_cols=109 Identities=16% Similarity=0.221 Sum_probs=67.6
Q ss_pred cCcceEEEecCcc-----------------cccc-hhhhhcCCC-----------CCCceeeeccCcccCC----CCCeE
Q 043585 161 ERLGSMVDVGGGN-----------------VLDL-PHAVANTPQ-----------TENLKYVADDMFQFIP----PADAY 207 (287)
Q Consensus 161 ~~~~~vlDvGgG~-----------------v~Dl-p~vi~~a~~-----------~~Ri~~~~gd~~~~~p----~~D~~ 207 (287)
+++++||=||||. ++|+ |.|++.+++ .+|++.+.+|.+.-+. .||+|
T Consensus 82 p~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yDvI 161 (294)
T 3o4f_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVI 161 (294)
T ss_dssp SCCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEEEE
T ss_pred CCCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccCCEE
Confidence 5678999999998 4555 777776652 6899999999998422 49998
Q ss_pred EeccccccCChHH---HHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCCCCCCCHHHHHHHHHhCCCcEEEEEe
Q 043585 208 FFMLFFHAFGGED---SLKILKKCREAIAGNGQRGKVLIMDIVINEKEDEDQRTDKEWKTLFLDAGFTCCKITT 278 (287)
Q Consensus 208 ~l~~vlh~~~d~~---~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~~~rt~~e~~~ll~~aGf~~~~~~~ 278 (287)
++=- ........ ....++.|+++|+| ||.+++.-.. +-- .......+.+-+.++ |..+..+.
T Consensus 162 i~D~-~dp~~~~~~L~t~eFy~~~~~~L~p---~Gv~v~q~~s-p~~---~~~~~~~~~~~l~~~-F~~v~~~~ 226 (294)
T 3o4f_A 162 ISDC-TDPIGPGESLFTSAFYEGCKRCLNP---GGIFVAQNGV-CFL---QQEEAIDSHRKLSHY-FSDVGFYQ 226 (294)
T ss_dssp EESC-CCCCCTTCCSSCCHHHHHHHHTEEE---EEEEEEEEEE-SSS---CCHHHHHHHHHHHHH-CSEEEEEE
T ss_pred EEeC-CCcCCCchhhcCHHHHHHHHHHhCC---CCEEEEecCC-ccc---ChHHHHHHHHHHHhh-CCceeeee
Confidence 7532 11111110 13588999999999 7877664221 110 111233344445555 76666554
No 259
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=95.76 E-value=0.0049 Score=56.19 Aligned_cols=81 Identities=14% Similarity=0.135 Sum_probs=52.7
Q ss_pred cCcceEEEecCcc----------------cccc-hhhhhcCCC-----------C---CCceeeeccCcccC------C-
Q 043585 161 ERLGSMVDVGGGN----------------VLDL-PHAVANTPQ-----------T---ENLKYVADDMFQFI------P- 202 (287)
Q Consensus 161 ~~~~~vlDvGgG~----------------v~Dl-p~vi~~a~~-----------~---~Ri~~~~gd~~~~~------p- 202 (287)
.++++|||||||. .+|+ |.|++.+++ . +|++++.+|.++-+ +
T Consensus 187 p~pkrVL~IGgG~G~~arellk~~~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~~ 266 (364)
T 2qfm_A 187 YTGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGR 266 (364)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTC
T ss_pred CCCCEEEEEECChhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccCC
Confidence 4678999999998 5565 677776653 1 28999999998821 2
Q ss_pred CCCeEEecccc--------ccCChHHHHHHHHHHHHHhcCCCCCcEEEEE
Q 043585 203 PADAYFFMLFF--------HAFGGEDSLKILKKCREAIAGNGQRGKVLIM 244 (287)
Q Consensus 203 ~~D~~~l~~vl--------h~~~d~~~~~iL~~~~~al~~~~~~g~lli~ 244 (287)
.||+|++--.- |-++.+--..+++.++++|+| ||.+++.
T Consensus 267 ~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~p---gGilv~q 313 (364)
T 2qfm_A 267 EFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQ---DGKYFTQ 313 (364)
T ss_dssp CEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEE---EEEEEEE
T ss_pred CceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCC---CcEEEEE
Confidence 49999885321 112222223333444999999 7776664
No 260
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=95.04 E-value=0.015 Score=51.44 Aligned_cols=67 Identities=10% Similarity=0.182 Sum_probs=45.8
Q ss_pred cccCcceEEEecCcc---------------cccc-hhhhhcCCC----CCCceeeeccCcc-cCCC--CCeEEecccccc
Q 043585 159 LIERLGSMVDVGGGN---------------VLDL-PHAVANTPQ----TENLKYVADDMFQ-FIPP--ADAYFFMLFFHA 215 (287)
Q Consensus 159 ~~~~~~~vlDvGgG~---------------v~Dl-p~vi~~a~~----~~Ri~~~~gd~~~-~~p~--~D~~~l~~vlh~ 215 (287)
......+|||||||. .+|. +..++.+++ .++++++.+|+.+ +++. +|+|+. +.-.+
T Consensus 47 ~~~~~~~VLEIG~G~G~lT~~La~~~~~V~aVEid~~li~~a~~~~~~~~~v~vi~gD~l~~~~~~~~fD~Iv~-NlPy~ 125 (295)
T 3gru_A 47 NLTKDDVVLEIGLGKGILTEELAKNAKKVYVIEIDKSLEPYANKLKELYNNIEIIWGDALKVDLNKLDFNKVVA-NLPYQ 125 (295)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHHSSEEEEEESCGGGHHHHHHHHHHCSSEEEEESCTTTSCGGGSCCSEEEE-ECCGG
T ss_pred CCCCcCEEEEECCCchHHHHHHHhcCCEEEEEECCHHHHHHHHHHhccCCCeEEEECchhhCCcccCCccEEEE-eCccc
Confidence 445677999999999 4555 555555543 4789999999998 6663 898874 45555
Q ss_pred CChHHHHHHHH
Q 043585 216 FGGEDSLKILK 226 (287)
Q Consensus 216 ~~d~~~~~iL~ 226 (287)
++.+-..++|+
T Consensus 126 is~pil~~lL~ 136 (295)
T 3gru_A 126 ISSPITFKLIK 136 (295)
T ss_dssp GHHHHHHHHHH
T ss_pred ccHHHHHHHHh
Confidence 55554444443
No 261
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=94.74 E-value=0.029 Score=52.26 Aligned_cols=75 Identities=9% Similarity=0.009 Sum_probs=49.9
Q ss_pred cCcceEEEecCcc---------------cccc-hhhhhcCCC------CCCceeeeccCcccCC-CCCeEEeccccccCC
Q 043585 161 ERLGSMVDVGGGN---------------VLDL-PHAVANTPQ------TENLKYVADDMFQFIP-PADAYFFMLFFHAFG 217 (287)
Q Consensus 161 ~~~~~vlDvGgG~---------------v~Dl-p~vi~~a~~------~~Ri~~~~gd~~~~~p-~~D~~~l~~vlh~~~ 217 (287)
.+..+|||+|||. .+|. |..++.|++ .+ ++|+.+|+.+..+ .+|+|++.-.-....
T Consensus 289 ~~~~~VLDlgcG~G~~sl~la~~~~~V~gvD~s~~ai~~A~~n~~~ngl~-v~~~~~d~~~~~~~~fD~Vv~dPPr~g~~ 367 (425)
T 2jjq_A 289 VEGEKILDMYSGVGTFGIYLAKRGFNVKGFDSNEFAIEMARRNVEINNVD-AEFEVASDREVSVKGFDTVIVDPPRAGLH 367 (425)
T ss_dssp CCSSEEEEETCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCC-EEEEECCTTTCCCTTCSEEEECCCTTCSC
T ss_pred CCCCEEEEeeccchHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHcCCc-EEEEECChHHcCccCCCEEEEcCCccchH
Confidence 4567999999999 4565 666666653 23 9999999998545 599999843322222
Q ss_pred hHHHHHHHHHHHHHhcCCCCCcEEEEE
Q 043585 218 GEDSLKILKKCREAIAGNGQRGKVLIM 244 (287)
Q Consensus 218 d~~~~~iL~~~~~al~~~~~~g~lli~ 244 (287)
+ .+++.++ .|+| +|.++|.
T Consensus 368 ~----~~~~~l~-~l~p---~givyvs 386 (425)
T 2jjq_A 368 P----RLVKRLN-REKP---GVIVYVS 386 (425)
T ss_dssp H----HHHHHHH-HHCC---SEEEEEE
T ss_pred H----HHHHHHH-hcCC---CcEEEEE
Confidence 2 3555553 4898 7766664
No 262
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=94.25 E-value=0.058 Score=49.65 Aligned_cols=59 Identities=3% Similarity=-0.083 Sum_probs=41.3
Q ss_pred CCCceeeeccCcc-cCC-CCCeEEeccccccC--ChHHHHHHHHHHHHHhcCCCCCcEEEEEee
Q 043585 187 TENLKYVADDMFQ-FIP-PADAYFFMLFFHAF--GGEDSLKILKKCREAIAGNGQRGKVLIMDI 246 (287)
Q Consensus 187 ~~Ri~~~~gd~~~-~~p-~~D~~~l~~vlh~~--~d~~~~~iL~~~~~al~~~~~~g~lli~e~ 246 (287)
.++|+++.+|+++ +.+ .+|+|++.=-.+.- .+++...+.+.+.+.|++ -+|++++|+..
T Consensus 289 ~~~I~~~~~D~~~~~~~~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk~-~~g~~~~iit~ 351 (393)
T 3k0b_A 289 GDLITFRQLQVADFQTEDEYGVVVANPPYGERLEDEEAVRQLYREMGIVYKR-MPTWSVYVLTS 351 (393)
T ss_dssp TTCSEEEECCGGGCCCCCCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHT-CTTCEEEEEEC
T ss_pred CCceEEEECChHhCCCCCCCCEEEECCCCccccCCchhHHHHHHHHHHHHhc-CCCCEEEEEEC
Confidence 4679999999998 444 49999887443322 235566777777777776 34889988753
No 263
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=93.74 E-value=0.14 Score=44.78 Aligned_cols=38 Identities=8% Similarity=0.104 Sum_probs=27.5
Q ss_pred CCCeEEeccccc---cCChH-HHHHHHHHHHHHhcCCCCC-cEEEE
Q 043585 203 PADAYFFMLFFH---AFGGE-DSLKILKKCREAIAGNGQR-GKVLI 243 (287)
Q Consensus 203 ~~D~~~l~~vlh---~~~d~-~~~~iL~~~~~al~~~~~~-g~lli 243 (287)
.+|+|+.--..| .|-|+ ....+|+-+.+.|+| | |.+++
T Consensus 140 ~~DlVlsD~apnsG~~~~D~~rs~~LL~~a~~~Lkp---G~G~FV~ 182 (277)
T 3evf_A 140 KCDTLLCDIGESSSSSVTEGERTVRVLDTVEKWLAC---GVDNFCV 182 (277)
T ss_dssp CCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTT---CCSEEEE
T ss_pred CccEEEecCccCcCchHHHHHHHHHHHHHHHHHhCC---CCCeEEE
Confidence 499999876554 23333 344678999999999 8 88777
No 264
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=93.68 E-value=0.15 Score=46.67 Aligned_cols=59 Identities=7% Similarity=-0.055 Sum_probs=43.3
Q ss_pred CCCceeeeccCcc-cCC-CCCeEEecccccc-C-ChHHHHHHHHHHHHHhcCCCCCcEEEEEee
Q 043585 187 TENLKYVADDMFQ-FIP-PADAYFFMLFFHA-F-GGEDSLKILKKCREAIAGNGQRGKVLIMDI 246 (287)
Q Consensus 187 ~~Ri~~~~gd~~~-~~p-~~D~~~l~~vlh~-~-~d~~~~~iL~~~~~al~~~~~~g~lli~e~ 246 (287)
.++|+++.+|+++ +.+ .+|+|++.=-.+. . ++++...+.+.+.+.|++ -+|++++|+..
T Consensus 282 ~~~I~~~~~D~~~l~~~~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~-~~g~~~~iit~ 344 (384)
T 3ldg_A 282 EDVVKLKQMRLQDFKTNKINGVLISNPPYGERLLDDKAVDILYNEMGETFAP-LKTWSQFILTN 344 (384)
T ss_dssp TTTEEEEECCGGGCCCCCCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTT-CTTSEEEEEES
T ss_pred CCceEEEECChHHCCccCCcCEEEECCchhhccCCHHHHHHHHHHHHHHHhh-CCCcEEEEEEC
Confidence 4679999999998 444 4999988644432 2 346677888888888876 44889988753
No 265
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=93.33 E-value=0.086 Score=46.00 Aligned_cols=68 Identities=10% Similarity=0.005 Sum_probs=47.0
Q ss_pred cccCcceEEEecCcc---------------cccc-hhhhhcCCC---CCCceeeeccCcc-cCCC--CCeEEeccccccC
Q 043585 159 LIERLGSMVDVGGGN---------------VLDL-PHAVANTPQ---TENLKYVADDMFQ-FIPP--ADAYFFMLFFHAF 216 (287)
Q Consensus 159 ~~~~~~~vlDvGgG~---------------v~Dl-p~vi~~a~~---~~Ri~~~~gd~~~-~~p~--~D~~~l~~vlh~~ 216 (287)
..... +|||||||. .+|+ +.+++.+++ .++++++.+|+.+ +++. ....++++.-++.
T Consensus 44 ~~~~~-~VLEIG~G~G~lt~~L~~~~~~V~avEid~~~~~~l~~~~~~~~v~vi~~D~l~~~~~~~~~~~~iv~NlPy~i 122 (271)
T 3fut_A 44 RPFTG-PVFEVGPGLGALTRALLEAGAEVTAIEKDLRLRPVLEETLSGLPVRLVFQDALLYPWEEVPQGSLLVANLPYHI 122 (271)
T ss_dssp CCCCS-CEEEECCTTSHHHHHHHHTTCCEEEEESCGGGHHHHHHHTTTSSEEEEESCGGGSCGGGSCTTEEEEEEECSSC
T ss_pred CCCCC-eEEEEeCchHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcCCCCEEEEECChhhCChhhccCccEEEecCcccc
Confidence 34555 999999999 4555 455555442 4689999999998 5552 2345677888888
Q ss_pred ChHHHHHHHHH
Q 043585 217 GGEDSLKILKK 227 (287)
Q Consensus 217 ~d~~~~~iL~~ 227 (287)
+.+-..++|..
T Consensus 123 ss~il~~ll~~ 133 (271)
T 3fut_A 123 ATPLVTRLLKT 133 (271)
T ss_dssp CHHHHHHHHHH
T ss_pred cHHHHHHHhcC
Confidence 88766666654
No 266
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=93.33 E-value=0.062 Score=52.96 Aligned_cols=110 Identities=15% Similarity=0.078 Sum_probs=70.3
Q ss_pred ChhhhhccCchHHHHHHHHHHhcccchhhHhhhcccccccCcceEEEecCcc--ccc--c--h----------------h
Q 043585 122 KHWEIMSQNPRLSQRFNQAMVNDSEMATFIVKDCCRTLIERLGSMVDVGGGN--VLD--L--P----------------H 179 (287)
Q Consensus 122 ~~~e~~~~~~~~~~~f~~aM~~~s~~~~~~~~~~~~~~~~~~~~vlDvGgG~--v~D--l--p----------------~ 179 (287)
..||.+.+|+-....|.+|+... +.++ ..+-.+...|+|||||+ +.+ + . .
T Consensus 377 ~tYe~fekD~vRy~~Y~~AI~~a-------l~d~-~~~~~~~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~k 448 (745)
T 3ua3_A 377 GVYNTFEQDQIKYDVYGEAVVGA-------LKDL-GADGRKTVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVK 448 (745)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHHH-------HHHH-HTTCCSEEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEE
T ss_pred HHHHHHcCChhhHHHHHHHHHHH-------HHHh-hcccCCCcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccE
Confidence 56888888888888888888762 2222 10112457899999999 211 1 0 0
Q ss_pred h---------hhcCC-----C-CCCceeeeccCcc-cC------C-CCCeEEeccccccCChHHHHHHHHHHHHHhcCCC
Q 043585 180 A---------VANTP-----Q-TENLKYVADDMFQ-FI------P-PADAYFFMLFFHAFGGEDSLKILKKCREAIAGNG 236 (287)
Q Consensus 180 v---------i~~a~-----~-~~Ri~~~~gd~~~-~~------p-~~D~~~l~~vlh~~~d~~~~~iL~~~~~al~~~~ 236 (287)
| +...+ . .++|+++.||+.+ .. | .+|+++.=+.=.....|-...+|..+.+-|+|
T Consensus 449 VyAVEknp~A~~~l~~~~~Ng~~d~VtVI~gd~eev~lp~~~~~~ekVDIIVSElmGsfl~nEL~pe~Ld~v~r~Lkp-- 526 (745)
T 3ua3_A 449 LYIVEKNPNAIVTLKYMNVRTWKRRVTIIESDMRSLPGIAKDRGFEQPDIIVSELLGSFGDNELSPECLDGVTGFLKP-- 526 (745)
T ss_dssp EEEEECCHHHHHHHHHHHHHTTTTCSEEEESCGGGHHHHHHHTTCCCCSEEEECCCBTTBGGGSHHHHHHTTGGGSCT--
T ss_pred EEEEeCChHHHHHHHHHHhcCCCCeEEEEeCchhhcccccccCCCCcccEEEEeccccccchhccHHHHHHHHHhCCC--
Confidence 0 00000 0 6899999999998 56 5 49998766553333445455678888889999
Q ss_pred CCcEEE
Q 043585 237 QRGKVL 242 (287)
Q Consensus 237 ~~g~ll 242 (287)
+|.++
T Consensus 527 -~Gi~i 531 (745)
T 3ua3_A 527 -TTISI 531 (745)
T ss_dssp -TCEEE
T ss_pred -CcEEE
Confidence 77543
No 267
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=93.06 E-value=0.12 Score=44.26 Aligned_cols=67 Identities=21% Similarity=0.215 Sum_probs=44.7
Q ss_pred cccCcceEEEecCcc----------------cccc-hhhhhcCCC--CCCceeeeccCcc-cCCC-C-CeEEeccccccC
Q 043585 159 LIERLGSMVDVGGGN----------------VLDL-PHAVANTPQ--TENLKYVADDMFQ-FIPP-A-DAYFFMLFFHAF 216 (287)
Q Consensus 159 ~~~~~~~vlDvGgG~----------------v~Dl-p~vi~~a~~--~~Ri~~~~gd~~~-~~p~-~-D~~~l~~vlh~~ 216 (287)
......+|||||||. .+|+ +..++.+++ ..+++++.+|+.+ +++. + +.+++.+.-++.
T Consensus 28 ~~~~~~~VLDiG~G~G~lt~~L~~~~~~~v~avEid~~~~~~~~~~~~~~v~~i~~D~~~~~~~~~~~~~~vv~NlPy~i 107 (249)
T 3ftd_A 28 NIEEGNTVVEVGGGTGNLTKVLLQHPLKKLYVIELDREMVENLKSIGDERLEVINEDASKFPFCSLGKELKVVGNLPYNV 107 (249)
T ss_dssp TCCTTCEEEEEESCHHHHHHHHTTSCCSEEEEECCCHHHHHHHTTSCCTTEEEECSCTTTCCGGGSCSSEEEEEECCTTT
T ss_pred CCCCcCEEEEEcCchHHHHHHHHHcCCCeEEEEECCHHHHHHHHhccCCCeEEEEcchhhCChhHccCCcEEEEECchhc
Confidence 345677999999999 4554 445555543 4689999999998 5553 2 567777777666
Q ss_pred ChHHHHHHH
Q 043585 217 GGEDSLKIL 225 (287)
Q Consensus 217 ~d~~~~~iL 225 (287)
+.+-..++|
T Consensus 108 ~~~il~~ll 116 (249)
T 3ftd_A 108 ASLIIENTV 116 (249)
T ss_dssp HHHHHHHHH
T ss_pred cHHHHHHHH
Confidence 655433343
No 268
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=92.80 E-value=0.017 Score=52.59 Aligned_cols=98 Identities=12% Similarity=0.161 Sum_probs=60.6
Q ss_pred cceEEEecCcc---------------cccc-hhhhhcCCC------CCCceeeeccCccc---CC---------------
Q 043585 163 LGSMVDVGGGN---------------VLDL-PHAVANTPQ------TENLKYVADDMFQF---IP--------------- 202 (287)
Q Consensus 163 ~~~vlDvGgG~---------------v~Dl-p~vi~~a~~------~~Ri~~~~gd~~~~---~p--------------- 202 (287)
..+|+|+|||. .+|. |..++.|++ .++++|+.+|..+. .+
T Consensus 214 ~~~vLDl~cG~G~~~l~la~~~~~V~gvd~~~~ai~~a~~n~~~ng~~~v~~~~~d~~~~~~~~~~~~~~~~l~~~~~~~ 293 (369)
T 3bt7_A 214 KGDLLELYCGNGNFSLALARNFDRVLATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEEFTQAMNGVREFNRLQGIDLKS 293 (369)
T ss_dssp CSEEEEESCTTSHHHHHHGGGSSEEEEECCCHHHHHHHHHHHHHTTCCSEEEECCCSHHHHHHHSSCCCCTTGGGSCGGG
T ss_pred CCEEEEccCCCCHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECCHHHHHHHHhhcccccccccccccc
Confidence 46899999999 4554 566666553 36899999998762 11
Q ss_pred -CCCeEEeccccccCChHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCCCCCCCHHHHHHHHHhCCCcEEEEEecC
Q 043585 203 -PADAYFFMLFFHAFGGEDSLKILKKCREAIAGNGQRGKVLIMDIVINEKEDEDQRTDKEWKTLFLDAGFTCCKITTMF 280 (287)
Q Consensus 203 -~~D~~~l~~vlh~~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~~~rt~~e~~~ll~~aGf~~~~~~~~~ 280 (287)
.+|+|++- -+.. .+.+.+.+.|++ +|+|+.+..-... . ..++..+. + ||++.++.+..
T Consensus 294 ~~fD~Vv~d-----PPr~---g~~~~~~~~l~~---~g~ivyvsc~p~t----~---ard~~~l~-~-~y~~~~~~~~D 352 (369)
T 3bt7_A 294 YQCETIFVD-----PPRS---GLDSETEKMVQA---YPRILYISCNPET----L---CKNLETLS-Q-THKVERLALFD 352 (369)
T ss_dssp CCEEEEEEC-----CCTT---CCCHHHHHHHTT---SSEEEEEESCHHH----H---HHHHHHHH-H-HEEEEEEEEEC
T ss_pred CCCCEEEEC-----cCcc---ccHHHHHHHHhC---CCEEEEEECCHHH----H---HHHHHHHh-h-CcEEEEEEeec
Confidence 47888752 2221 234455566677 7898887642211 1 12333333 2 78888888763
No 269
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=92.76 E-value=0.078 Score=45.83 Aligned_cols=56 Identities=7% Similarity=0.138 Sum_probs=38.6
Q ss_pred ccCcceEEEecCcc---------------cccc-h-------hhhhcCCC-------CCCceeeeccCccc---C----C
Q 043585 160 IERLGSMVDVGGGN---------------VLDL-P-------HAVANTPQ-------TENLKYVADDMFQF---I----P 202 (287)
Q Consensus 160 ~~~~~~vlDvGgG~---------------v~Dl-p-------~vi~~a~~-------~~Ri~~~~gd~~~~---~----p 202 (287)
.....+|||+|||. .+|. | ..++.+++ ..||+++.+|+.+. + .
T Consensus 81 ~~~~~~VLDlgcG~G~~a~~lA~~g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~~l~~~~~~~~ 160 (258)
T 2r6z_A 81 HTAHPTVWDATAGLGRDSFVLASLGLTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQMPALVKTQG 160 (258)
T ss_dssp GGGCCCEEETTCTTCHHHHHHHHTTCCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHHHHHHHHHHHC
T ss_pred cCCcCeEEEeeCccCHHHHHHHHhCCEEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHHHHHhhhccCC
Confidence 34557999999999 5666 5 45555542 36799999998772 3 2
Q ss_pred CCCeEEecccccc
Q 043585 203 PADAYFFMLFFHA 215 (287)
Q Consensus 203 ~~D~~~l~~vlh~ 215 (287)
.+|+|++.-.++.
T Consensus 161 ~fD~V~~dP~~~~ 173 (258)
T 2r6z_A 161 KPDIVYLDPMYPE 173 (258)
T ss_dssp CCSEEEECCCC--
T ss_pred CccEEEECCCCCC
Confidence 5999998655443
No 270
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=92.74 E-value=0.055 Score=50.48 Aligned_cols=77 Identities=14% Similarity=0.148 Sum_probs=49.6
Q ss_pred CceeeeccCccc-CC-CCCeEEeccccccC-ChH--------------HHHHHHHHHHHHhcCCCCCcEEEEEeec--cC
Q 043585 189 NLKYVADDMFQF-IP-PADAYFFMLFFHAF-GGE--------------DSLKILKKCREAIAGNGQRGKVLIMDIV--IN 249 (287)
Q Consensus 189 Ri~~~~gd~~~~-~p-~~D~~~l~~vlh~~-~d~--------------~~~~iL~~~~~al~~~~~~g~lli~e~~--~~ 249 (287)
++.+..+|.+.. .. .+|+|+..-.++.. ..+ ....+++++.+.|+| ||++.++-+- +-
T Consensus 237 ~~~i~~gD~l~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~---gG~~a~V~p~~~L~ 313 (445)
T 2okc_A 237 RSPIVCEDSLEKEPSTLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKT---GGRAAVVLPDNVLF 313 (445)
T ss_dssp CCSEEECCTTTSCCSSCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEE---EEEEEEEEEHHHHH
T ss_pred CCCEeeCCCCCCcccCCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhcc---CCEEEEEECCcccc
Confidence 788999999983 33 59999987655542 111 124789999999999 9999877542 22
Q ss_pred CCCCCCCCCHHHHHH-HHHhCCCcE
Q 043585 250 EKEDEDQRTDKEWKT-LFLDAGFTC 273 (287)
Q Consensus 250 ~~~~~~~rt~~e~~~-ll~~aGf~~ 273 (287)
... ..+++++ +++..++..
T Consensus 314 ~~~-----~~~~iR~~L~~~~~l~~ 333 (445)
T 2okc_A 314 EAG-----AGETIRKRLLQDFNLHT 333 (445)
T ss_dssp CST-----HHHHHHHHHHHHEEEEE
T ss_pred cCc-----HHHHHHHHHHhcCcEEE
Confidence 111 2356666 455554443
No 271
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=91.90 E-value=0.18 Score=46.12 Aligned_cols=59 Identities=8% Similarity=-0.009 Sum_probs=41.5
Q ss_pred CCCceeeeccCcc-cCC-CCCeEEecccccc-CC-hHHHHHHHHHHHHHhcCCCCCcEEEEEee
Q 043585 187 TENLKYVADDMFQ-FIP-PADAYFFMLFFHA-FG-GEDSLKILKKCREAIAGNGQRGKVLIMDI 246 (287)
Q Consensus 187 ~~Ri~~~~gd~~~-~~p-~~D~~~l~~vlh~-~~-d~~~~~iL~~~~~al~~~~~~g~lli~e~ 246 (287)
.++|++..+|+.+ +.+ .+|+|++.=-.+. .. +++...+.+.+.+.|++ -+|++++|+..
T Consensus 283 ~~~i~~~~~D~~~l~~~~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~-~~g~~~~iit~ 345 (385)
T 3ldu_A 283 DEYIEFNVGDATQFKSEDEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRK-LKNWSYYLITS 345 (385)
T ss_dssp GGGEEEEECCGGGCCCSCBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHT-SBSCEEEEEES
T ss_pred CCceEEEECChhhcCcCCCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhh-CCCCEEEEEEC
Confidence 3579999999998 444 4999988654432 22 45667788888777776 34788888753
No 272
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=91.62 E-value=0.11 Score=44.96 Aligned_cols=68 Identities=12% Similarity=0.173 Sum_probs=43.5
Q ss_pred cccCcceEEEecCcc---------------cccc-hhhhhcCCC----CCCceeeeccCcc-cCCC----CCeEEecccc
Q 043585 159 LIERLGSMVDVGGGN---------------VLDL-PHAVANTPQ----TENLKYVADDMFQ-FIPP----ADAYFFMLFF 213 (287)
Q Consensus 159 ~~~~~~~vlDvGgG~---------------v~Dl-p~vi~~a~~----~~Ri~~~~gd~~~-~~p~----~D~~~l~~vl 213 (287)
......+|||||||. .+|+ +.+++.+++ .++++++.+|+.+ +++. ....++++.-
T Consensus 26 ~~~~~~~VLEIG~G~G~lt~~La~~~~~V~avEid~~~~~~~~~~~~~~~~v~~i~~D~~~~~~~~~~~~~~~~vv~NlP 105 (255)
T 3tqs_A 26 HPQKTDTLVEIGPGRGALTDYLLTECDNLALVEIDRDLVAFLQKKYNQQKNITIYQNDALQFDFSSVKTDKPLRVVGNLP 105 (255)
T ss_dssp CCCTTCEEEEECCTTTTTHHHHTTTSSEEEEEECCHHHHHHHHHHHTTCTTEEEEESCTTTCCGGGSCCSSCEEEEEECC
T ss_pred CCCCcCEEEEEcccccHHHHHHHHhCCEEEEEECCHHHHHHHHHHHhhCCCcEEEEcchHhCCHHHhccCCCeEEEecCC
Confidence 455678999999999 4555 555655543 4789999999998 4432 1223556666
Q ss_pred ccCChHHHHHHHH
Q 043585 214 HAFGGEDSLKILK 226 (287)
Q Consensus 214 h~~~d~~~~~iL~ 226 (287)
++.+.+-..++|.
T Consensus 106 Y~is~~il~~ll~ 118 (255)
T 3tqs_A 106 YNISTPLLFHLFS 118 (255)
T ss_dssp HHHHHHHHHHHHH
T ss_pred cccCHHHHHHHHh
Confidence 5555543344443
No 273
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=90.29 E-value=0.34 Score=44.10 Aligned_cols=114 Identities=11% Similarity=0.106 Sum_probs=64.5
Q ss_pred ccCcceEEEecCcc---------------cccchhhhhcCCCCCCceeeeccCcccCC---CCCeEEeccccccCChHHH
Q 043585 160 IERLGSMVDVGGGN---------------VLDLPHAVANTPQTENLKYVADDMFQFIP---PADAYFFMLFFHAFGGEDS 221 (287)
Q Consensus 160 ~~~~~~vlDvGgG~---------------v~Dlp~vi~~a~~~~Ri~~~~gd~~~~~p---~~D~~~l~~vlh~~~d~~~ 221 (287)
+..+.++||+|++. -+|.-++-......++|+++.+|.++..| .+|++++=.+. .....
T Consensus 209 l~~G~~vlDLGAaPGGWT~~l~~rg~~V~aVD~~~l~~~l~~~~~V~~~~~d~~~~~~~~~~~D~vvsDm~~---~p~~~ 285 (375)
T 4auk_A 209 LANGMWAVDLGACPGGWTYQLVKRNMWVYSVDNGPMAQSLMDTGQVTWLREDGFKFRPTRSNISWMVCDMVE---KPAKV 285 (375)
T ss_dssp SCTTCEEEEETCTTCHHHHHHHHTTCEEEEECSSCCCHHHHTTTCEEEECSCTTTCCCCSSCEEEEEECCSS---CHHHH
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHCCCEEEEEEhhhcChhhccCCCeEEEeCccccccCCCCCcCEEEEcCCC---ChHHh
Confidence 45678999999987 46653333333347899999999999433 37888765443 34445
Q ss_pred HHHHHHHHHHhcCCCCCcEEEEEeeccCCCCCCCCCCHHHHHHHHHhCCCcE-EEEEec
Q 043585 222 LKILKKCREAIAGNGQRGKVLIMDIVINEKEDEDQRTDKEWKTLFLDAGFTC-CKITTM 279 (287)
Q Consensus 222 ~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~~~rt~~e~~~ll~~aGf~~-~~~~~~ 279 (287)
..++.+....... ++.|+.+..........-....+.+.+.|+..||.. .++.++
T Consensus 286 ~~l~~~wl~~~~~---~~aI~~lKL~mk~~~~~l~~~~~~i~~~l~~~g~~~~l~akhL 341 (375)
T 4auk_A 286 AALMAQWLVNGWC---RETIFNLKLPMKKRYEEVSHNLAYIQAQLDEHGINAQIQARQL 341 (375)
T ss_dssp HHHHHHHHHTTSC---SEEEEEEECCSSSHHHHHHHHHHHHHHHHHHTTCCEEEEEECC
T ss_pred HHHHHHHHhcccc---ceEEEEEEecccchHHHHHHHHHHHHHHHHhcCcchhheehhh
Confidence 5555554444443 455554443221100001112345566778889863 244443
No 274
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=90.27 E-value=0.11 Score=47.44 Aligned_cols=100 Identities=11% Similarity=0.059 Sum_probs=62.6
Q ss_pred CcceEEEecCcc----------------cccc-hhhhhcCCC--------------CCCceeeeccCcccC-------CC
Q 043585 162 RLGSMVDVGGGN----------------VLDL-PHAVANTPQ--------------TENLKYVADDMFQFI-------PP 203 (287)
Q Consensus 162 ~~~~vlDvGgG~----------------v~Dl-p~vi~~a~~--------------~~Ri~~~~gd~~~~~-------p~ 203 (287)
.+++||=||||. ++|+ |.|++.+++ .+|++.+.+|.+.-+ ..
T Consensus 205 ~pkrVLIIGgGdG~~~revlkh~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~~~ 284 (381)
T 3c6k_A 205 TGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGRE 284 (381)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTCC
T ss_pred CCCeEEEECCCcHHHHHHHHhcCCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhccCc
Confidence 357999999998 4555 777776542 467999999987621 24
Q ss_pred CCeEEecccccc--------CChHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCCCCCCCHHHHHHHHHhC
Q 043585 204 ADAYFFMLFFHA--------FGGEDSLKILKKCREAIAGNGQRGKVLIMDIVINEKEDEDQRTDKEWKTLFLDA 269 (287)
Q Consensus 204 ~D~~~l~~vlh~--------~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~~~rt~~e~~~ll~~a 269 (287)
||+|++=-.=.. -...-...+++.|+++|+| +|.++..-. .+. .......+.+.+++.
T Consensus 285 yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p---~GVlv~Q~~-s~~----~~~~~~~i~~tl~~v 350 (381)
T 3c6k_A 285 FDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQ---DGKYFTQGN-CVN----LTEALSLYEEQLGRL 350 (381)
T ss_dssp EEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEE---EEEEEEEEE-ETT----CHHHHHHHHHHHTTS
T ss_pred eeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCC---CCEEEEecC-CCc----chhHHHHHHHHHHHh
Confidence 999886321110 0112235688999999999 776655321 111 112345677777777
No 275
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=88.78 E-value=1.1 Score=38.79 Aligned_cols=82 Identities=16% Similarity=0.223 Sum_probs=45.5
Q ss_pred cccCcceEEEecCcc------cccchhh-------hhc---CCC----CCCc---eeeec-cCcccCC-CCCeEEecccc
Q 043585 159 LIERLGSMVDVGGGN------VLDLPHA-------VAN---TPQ----TENL---KYVAD-DMFQFIP-PADAYFFMLFF 213 (287)
Q Consensus 159 ~~~~~~~vlDvGgG~------v~Dlp~v-------i~~---a~~----~~Ri---~~~~g-d~~~~~p-~~D~~~l~~vl 213 (287)
.+....+|||+||+. ...+..| +.. ... ...+ .|..| ||++..+ .+|+|+.=.-=
T Consensus 70 likpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~~~~P~~~~~~Gv~~i~~~~G~Df~~~~~~~~DvVLSDMAP 149 (269)
T 2px2_A 70 FVQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPGHEEPMLMQSYGWNIVTMKSGVDVFYKPSEISDTLLCDIGE 149 (269)
T ss_dssp SCCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTTSCCCCCCCSTTGGGEEEECSCCGGGSCCCCCSEEEECCCC
T ss_pred CCCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEccccccCCCcccCCCceEEEeeccCCccCCCCCCCCEEEeCCCC
Confidence 466788999999988 2222111 110 011 2455 44447 9998444 58998753211
Q ss_pred c--cC-ChH-HHHHHHHHHHHHhcCCCCCc-EEEE
Q 043585 214 H--AF-GGE-DSLKILKKCREAIAGNGQRG-KVLI 243 (287)
Q Consensus 214 h--~~-~d~-~~~~iL~~~~~al~~~~~~g-~lli 243 (287)
. ++ .|. .....|.-+.+.|+| || .+++
T Consensus 150 nSG~~~vD~~Rs~~aL~~A~~~Lk~---gG~~Fvv 181 (269)
T 2px2_A 150 SSPSAEIEEQRTLRILEMVSDWLSR---GPKEFCI 181 (269)
T ss_dssp CCSCHHHHHHHHHHHHHHHHHHHTT---CCSEEEE
T ss_pred CCCccHHHHHHHHHHHHHHHHHhhc---CCcEEEE
Confidence 1 11 111 122356667788999 78 6666
No 276
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=88.04 E-value=0.61 Score=41.27 Aligned_cols=107 Identities=7% Similarity=0.045 Sum_probs=60.1
Q ss_pred cccCcceEEEecCcc------------------cccc-hhhhhcCCC------CCCceeeeccCcccC------CCCCeE
Q 043585 159 LIERLGSMVDVGGGN------------------VLDL-PHAVANTPQ------TENLKYVADDMFQFI------PPADAY 207 (287)
Q Consensus 159 ~~~~~~~vlDvGgG~------------------v~Dl-p~vi~~a~~------~~Ri~~~~gd~~~~~------p~~D~~ 207 (287)
......+|||+|+|. .+|. +..++.+++ ..+|+++.+|+.+.. ..+|.|
T Consensus 99 ~~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~~fD~V 178 (309)
T 2b9e_A 99 DPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSPSDPRYHEVHYI 178 (309)
T ss_dssp CCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGSCTTCGGGTTEEEE
T ss_pred CCCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCChHhcCccccccCCCCEE
Confidence 345678999999988 3443 344444332 357999999987721 248999
Q ss_pred Eec------cccc---------cCChHHH-------HHHHHHHHHHhcCCCCCcEEEEEeeccCCCCCCCCCCHHHHHHH
Q 043585 208 FFM------LFFH---------AFGGEDS-------LKILKKCREAIAGNGQRGKVLIMDIVINEKEDEDQRTDKEWKTL 265 (287)
Q Consensus 208 ~l~------~vlh---------~~~d~~~-------~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~~~rt~~e~~~l 265 (287)
++- .++. .|+.++. .+||+++.+.+ + ||+|+....-+.. +-+.+....+
T Consensus 179 l~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l-~---gG~lvYsTCs~~~-----~Ene~~v~~~ 249 (309)
T 2b9e_A 179 LLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFP-S---LQRLVYSTCSLCQ-----EENEDVVRDA 249 (309)
T ss_dssp EECCCCCC------------------CCHHHHHHHHHHHHHHHTTCT-T---CCEEEEEESCCCG-----GGTHHHHHHH
T ss_pred EEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhcc-C---CCEEEEECCCCCh-----HHhHHHHHHH
Confidence 871 1221 1222221 34677666555 4 6887776654432 2235566666
Q ss_pred HHhC-C-CcEE
Q 043585 266 FLDA-G-FTCC 274 (287)
Q Consensus 266 l~~a-G-f~~~ 274 (287)
|++. + |+.+
T Consensus 250 l~~~~~~~~~~ 260 (309)
T 2b9e_A 250 LQQNPGAFRLA 260 (309)
T ss_dssp HTTSTTTEEEC
T ss_pred HHhCCCcEEEe
Confidence 7655 4 6554
No 277
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=87.22 E-value=0.23 Score=43.90 Aligned_cols=52 Identities=10% Similarity=0.108 Sum_probs=37.5
Q ss_pred cccCcceEEEecCcc-----------------cccc-hhhhhcCCC-----CCCceeeeccCcc-c--C-----CCCCeE
Q 043585 159 LIERLGSMVDVGGGN-----------------VLDL-PHAVANTPQ-----TENLKYVADDMFQ-F--I-----PPADAY 207 (287)
Q Consensus 159 ~~~~~~~vlDvGgG~-----------------v~Dl-p~vi~~a~~-----~~Ri~~~~gd~~~-~--~-----p~~D~~ 207 (287)
......++||+|||. .+|. |.+++.+++ .+|++++.+|+.+ + + ..+|.|
T Consensus 23 ~~~~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~g~~v~~v~~d~~~l~~~l~~~g~~~~D~V 102 (301)
T 1m6y_A 23 KPEDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREADFLLKTLGIEKVDGI 102 (301)
T ss_dssp CCCTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGGHHHHHHHTTCSCEEEE
T ss_pred CCCCCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCHHHHHHHHHhcCCCCCCEE
Confidence 345668999999998 4665 666766653 3799999999876 2 1 258988
Q ss_pred Eec
Q 043585 208 FFM 210 (287)
Q Consensus 208 ~l~ 210 (287)
++-
T Consensus 103 l~D 105 (301)
T 1m6y_A 103 LMD 105 (301)
T ss_dssp EEE
T ss_pred EEc
Confidence 863
No 278
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=86.94 E-value=0.63 Score=40.62 Aligned_cols=38 Identities=16% Similarity=0.225 Sum_probs=27.0
Q ss_pred CCCeEEeccccc----cCChHHHHHHHHHHHHHhcCCCCC--cEEEE
Q 043585 203 PADAYFFMLFFH----AFGGEDSLKILKKCREAIAGNGQR--GKVLI 243 (287)
Q Consensus 203 ~~D~~~l~~vlh----~~~d~~~~~iL~~~~~al~~~~~~--g~lli 243 (287)
.+|+|+.--..+ ..+......+|+-+.+.|+| | |.+++
T Consensus 156 ~~DvVLSDmApnsG~~~~D~~rs~~LL~~A~~~Lk~---g~~G~Fv~ 199 (282)
T 3gcz_A 156 PGDTLLCDIGESSPSIAVEEQRTLRVLNCAKQWLQE---GNYTEFCI 199 (282)
T ss_dssp CCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHHH---HCCCEEEE
T ss_pred CcCEEEecCccCCCChHHHHHHHHHHHHHHHHHcCC---CCCCcEEE
Confidence 499998866655 22333444678888999999 7 87776
No 279
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=86.55 E-value=3.6 Score=40.32 Aligned_cols=87 Identities=15% Similarity=0.162 Sum_probs=66.4
Q ss_pred CCceeeeccCccc--C-----------CC-CCeEEeccccccCChHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCC
Q 043585 188 ENLKYVADDMFQF--I-----------PP-ADAYFFMLFFHAFGGEDSLKILKKCREAIAGNGQRGKVLIMDIVINEKED 253 (287)
Q Consensus 188 ~Ri~~~~gd~~~~--~-----------p~-~D~~~l~~vlh~~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~ 253 (287)
++..+++.|+.+. + |+ .=+++.=.+|.+++.+++.++|+.+. .+ + ++.+++.|.+.+....
T Consensus 188 ~~y~~v~~Dl~~~~~~~~~l~~~g~~d~~~ptl~i~Egvl~Yl~~~~~~~ll~~~~-~~-~---~~~~~~~e~~~~~~~~ 262 (695)
T 2zwa_A 188 PKYLARPCDLNDSKMFSTLLNECQLYDPNVVKVFVAEVSLAYMKPERSDSIIEATS-KM-E---NSHFIILEQLIPKGPF 262 (695)
T ss_dssp SSEEEEECCTTCHHHHHHHHHHTTTTCTTEEEEEEEESSGGGSCHHHHHHHHHHHH-TS-S---SEEEEEEEECCTTCTT
T ss_pred CCeeEEeCcCCCcHHHHHHHhhccCCCCCCCEEEeeeeEEEEcCHHHHHHHHHHHh-hC-C---CceEEEEEeecCCCCC
Confidence 5889999999872 1 22 23566777999999999999999997 45 5 6889999988764332
Q ss_pred C---------------------CCCCHHHHHHHHHhCCCcEEEEEec
Q 043585 254 E---------------------DQRTDKEWKTLFLDAGFTCCKITTM 279 (287)
Q Consensus 254 ~---------------------~~rt~~e~~~ll~~aGf~~~~~~~~ 279 (287)
. ...+.++..++|.++||+.+.....
T Consensus 263 d~f~~~m~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~Gw~~v~~~~~ 309 (695)
T 2zwa_A 263 EPFSKQMLAHFKRNDSPLQSVLKYNTIESQVQRFNKLGFAYVNVGDM 309 (695)
T ss_dssp SHHHHHHHHHHHHTTCCCCGGGTCCSHHHHHHHHHHTTCCEEEEEEH
T ss_pred ChHHHHHHHHHHHcCCCCCccccCCCHHHHHHHHHHCCCCCcceeeH
Confidence 2 3457999999999999987766644
No 280
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=85.45 E-value=0.24 Score=43.33 Aligned_cols=61 Identities=21% Similarity=0.179 Sum_probs=38.0
Q ss_pred cccCcceEEEecCcc----------c---------ccc-hhhhhcCCC--CCCceeeeccCcc-cCCC-C------CeEE
Q 043585 159 LIERLGSMVDVGGGN----------V---------LDL-PHAVANTPQ--TENLKYVADDMFQ-FIPP-A------DAYF 208 (287)
Q Consensus 159 ~~~~~~~vlDvGgG~----------v---------~Dl-p~vi~~a~~--~~Ri~~~~gd~~~-~~p~-~------D~~~ 208 (287)
......+|||||||. . +|+ +.+++.+++ .++++++.+|+.+ +++. + ...+
T Consensus 39 ~~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~~~~v~~i~~D~~~~~~~~~~~~~~~~~~~v 118 (279)
T 3uzu_A 39 RPERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRFGELLELHAGDALTFDFGSIARPGDEPSLRI 118 (279)
T ss_dssp CCCTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHHGGGEEEEESCGGGCCGGGGSCSSSSCCEEE
T ss_pred CCCCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhcCCCcEEEECChhcCChhHhcccccCCceEE
Confidence 445678999999999 1 122 344444433 4689999999998 5543 2 2445
Q ss_pred eccccccCChH
Q 043585 209 FMLFFHAFGGE 219 (287)
Q Consensus 209 l~~vlh~~~d~ 219 (287)
++|.-++.+.+
T Consensus 119 v~NlPY~iss~ 129 (279)
T 3uzu_A 119 IGNLPYNISSP 129 (279)
T ss_dssp EEECCHHHHHH
T ss_pred EEccCccccHH
Confidence 55555544443
No 281
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=82.76 E-value=0.22 Score=45.82 Aligned_cols=74 Identities=14% Similarity=0.114 Sum_probs=49.4
Q ss_pred CcceEEEecCcc------------------cccc-hhhhhcCCC-------CCC-ceeeeccCccc----CC-CCCeEEe
Q 043585 162 RLGSMVDVGGGN------------------VLDL-PHAVANTPQ-------TEN-LKYVADDMFQF----IP-PADAYFF 209 (287)
Q Consensus 162 ~~~~vlDvGgG~------------------v~Dl-p~vi~~a~~-------~~R-i~~~~gd~~~~----~p-~~D~~~l 209 (287)
+..+|||+++|+ .+|. |..++.+++ .++ ++++.+|.++- .+ .||+|++
T Consensus 52 ~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~~~~~fD~V~l 131 (392)
T 3axs_A 52 RPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKEWGFGFDYVDL 131 (392)
T ss_dssp SCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSCCSSCEEEEEE
T ss_pred CCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHhhCCCCcEEEE
Confidence 457899999998 3443 444444442 455 99999998762 13 4899987
Q ss_pred ccccccCChHHHHHHHHHHHHHhcCCCCCcEEEEE
Q 043585 210 MLFFHAFGGEDSLKILKKCREAIAGNGQRGKVLIM 244 (287)
Q Consensus 210 ~~vlh~~~d~~~~~iL~~~~~al~~~~~~g~lli~ 244 (287)
-= +.. ...+++.+.+.|++ ||.|++.
T Consensus 132 DP----~g~--~~~~l~~a~~~Lk~---gGll~~t 157 (392)
T 3axs_A 132 DP----FGT--PVPFIESVALSMKR---GGILSLT 157 (392)
T ss_dssp CC----SSC--CHHHHHHHHHHEEE---EEEEEEE
T ss_pred CC----CcC--HHHHHHHHHHHhCC---CCEEEEE
Confidence 43 111 13588999999999 7865553
No 282
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=81.81 E-value=1.9 Score=42.58 Aligned_cols=57 Identities=11% Similarity=0.135 Sum_probs=36.0
Q ss_pred CCCceeeeccCccc-CC----CCCeEEecccccc-C-ChHHHHHHHHHHHHHh---cCCCCCcEEEEEee
Q 043585 187 TENLKYVADDMFQF-IP----PADAYFFMLFFHA-F-GGEDSLKILKKCREAI---AGNGQRGKVLIMDI 246 (287)
Q Consensus 187 ~~Ri~~~~gd~~~~-~p----~~D~~~l~~vlh~-~-~d~~~~~iL~~~~~al---~~~~~~g~lli~e~ 246 (287)
.++|++..+|+.+. .| .+|+|++.=-... + ++++...+.+.+.+.+ .| ||+++|+..
T Consensus 282 ~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~l~~~lk~~~~---g~~~~ilt~ 348 (703)
T 3v97_A 282 GELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFG---GWNLSLFSA 348 (703)
T ss_dssp GGGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC---CCHHHHHHHHHHHHHHHHHCT---TCEEEEEES
T ss_pred CCceEEEECChhhCccccccCCCCEEEeCCCccccccchhHHHHHHHHHHHHHHhhCC---CCeEEEEeC
Confidence 45699999999882 23 4899887633321 2 2344555555555544 46 899998754
No 283
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=81.07 E-value=3.6 Score=36.11 Aligned_cols=50 Identities=10% Similarity=0.176 Sum_probs=31.2
Q ss_pred eeec-cCcccCC-CCCeEEeccccc----cCChHHHHHHHHHHHHHhcCCCCC-cEEEEE
Q 043585 192 YVAD-DMFQFIP-PADAYFFMLFFH----AFGGEDSLKILKKCREAIAGNGQR-GKVLIM 244 (287)
Q Consensus 192 ~~~g-d~~~~~p-~~D~~~l~~vlh----~~~d~~~~~iL~~~~~al~~~~~~-g~lli~ 244 (287)
+..+ |++.-.+ .+|+|+.--.-+ ..+......+|+-+.+.|+| | |.+++-
T Consensus 134 ~~~~~di~~l~~~~~DlVlsD~APnsG~~~~D~~rs~~LL~~A~~~Lkp---G~G~FV~K 190 (300)
T 3eld_A 134 FKDKSNVFTMPTEPSDTLLCDIGESSSNPLVERDRTMKVLENFERWKHV---NTENFCVK 190 (300)
T ss_dssp EECSCCTTTSCCCCCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCT---TCCEEEEE
T ss_pred eecCceeeecCCCCcCEEeecCcCCCCCHHHHHHHHHHHHHHHHHHhcC---CCCcEEEE
Confidence 3434 5554223 489998755444 22222335678888999999 8 887763
No 284
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=81.02 E-value=0.57 Score=40.17 Aligned_cols=67 Identities=13% Similarity=0.119 Sum_probs=41.5
Q ss_pred cccCcceEEEecCcc---c------------ccc-hhhhhcCCC----CCCceeeeccCcc-cCCC------CCeEEecc
Q 043585 159 LIERLGSMVDVGGGN---V------------LDL-PHAVANTPQ----TENLKYVADDMFQ-FIPP------ADAYFFML 211 (287)
Q Consensus 159 ~~~~~~~vlDvGgG~---v------------~Dl-p~vi~~a~~----~~Ri~~~~gd~~~-~~p~------~D~~~l~~ 211 (287)
......+|||||||. . +|+ |.+++.+++ .++++++.+|+.+ +++. .+.+++++
T Consensus 18 ~~~~~~~VLEIG~G~G~lt~l~~~~~~~v~avEid~~~~~~a~~~~~~~~~v~~i~~D~~~~~~~~~~~~~~~~~~vvsN 97 (252)
T 1qyr_A 18 NPQKGQAMVEIGPGLAALTEPVGERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTFNFGELAEKMGQPLRVFGN 97 (252)
T ss_dssp CCCTTCCEEEECCTTTTTHHHHHTTCSCEEEECCCHHHHHHHHTCTTTGGGEEEECSCGGGCCHHHHHHHHTSCEEEEEE
T ss_pred CCCCcCEEEEECCCCcHHHHhhhCCCCeEEEEECCHHHHHHHHHHhccCCceEEEECchhhCCHHHhhcccCCceEEEEC
Confidence 345667999999998 1 222 233333322 2479999999988 4432 34677777
Q ss_pred ccccCChHHHHHHH
Q 043585 212 FFHAFGGEDSLKIL 225 (287)
Q Consensus 212 vlh~~~d~~~~~iL 225 (287)
.-.+.+.+-..++|
T Consensus 98 lPY~i~~~il~~ll 111 (252)
T 1qyr_A 98 LPYNISTPLMFHLF 111 (252)
T ss_dssp CCTTTHHHHHHHHH
T ss_pred CCCCccHHHHHHHH
Confidence 77666655444444
No 285
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=80.41 E-value=0.96 Score=43.23 Aligned_cols=81 Identities=12% Similarity=0.063 Sum_probs=51.8
Q ss_pred ceeeeccCccc--C--CCCCeEEeccccccC-------------ChHHHHHHHHHHHHHhcCCCCCcEEEEEee--ccCC
Q 043585 190 LKYVADDMFQF--I--PPADAYFFMLFFHAF-------------GGEDSLKILKKCREAIAGNGQRGKVLIMDI--VINE 250 (287)
Q Consensus 190 i~~~~gd~~~~--~--p~~D~~~l~~vlh~~-------------~d~~~~~iL~~~~~al~~~~~~g~lli~e~--~~~~ 250 (287)
+.+..+|.+.. . +.+|+|+..=.+... ++. -..++.++.+.|+| ||++.++-+ ++..
T Consensus 244 ~~I~~gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~-~~~Fl~~~l~~Lk~---gGr~a~V~p~~~L~~ 319 (541)
T 2ar0_A 244 GAIRLGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNK-QLCFMQHIIETLHP---GGRAAVVVPDNVLFE 319 (541)
T ss_dssp BSEEESCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCH-HHHHHHHHHHHEEE---EEEEEEEEEHHHHHC
T ss_pred CCeEeCCCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCch-HHHHHHHHHHHhCC---CCEEEEEecCcceec
Confidence 78899999872 2 359999986544431 122 24789999999999 999887743 2211
Q ss_pred CCCCCCCCHHHHHHHHHhCCCcEEEEEecC
Q 043585 251 KEDEDQRTDKEWKTLFLDAGFTCCKITTMF 280 (287)
Q Consensus 251 ~~~~~~rt~~e~~~ll~~aGf~~~~~~~~~ 280 (287)
....+.++++|-+.+ .+..++.++
T Consensus 320 -----~~~~~~iR~~L~~~~-~l~~ii~Lp 343 (541)
T 2ar0_A 320 -----GGKGTDIRRDLMDKC-HLHTILRLP 343 (541)
T ss_dssp -----CTHHHHHHHHHHHHE-EEEEEEECC
T ss_pred -----CcHHHHHHHHHhhcC-CEEEEEEcC
Confidence 112456777666653 555666654
No 286
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=80.14 E-value=0.38 Score=44.49 Aligned_cols=48 Identities=15% Similarity=0.314 Sum_probs=35.4
Q ss_pred CcceEEEecCcc---------------cccc-hhhhhcCCC--------CCCceeeeccCccc---CC--CCCeEEe
Q 043585 162 RLGSMVDVGGGN---------------VLDL-PHAVANTPQ--------TENLKYVADDMFQF---IP--PADAYFF 209 (287)
Q Consensus 162 ~~~~vlDvGgG~---------------v~Dl-p~vi~~a~~--------~~Ri~~~~gd~~~~---~p--~~D~~~l 209 (287)
...+|||+|||. .+|. |.+++.++. .++++++.+|+++. .+ .||+|++
T Consensus 93 ~g~~VLDLgcG~G~~al~LA~~g~~V~~VD~s~~~l~~Ar~N~~~~~~gl~~i~~i~~Da~~~L~~~~~~~fDvV~l 169 (410)
T 3ll7_A 93 EGTKVVDLTGGLGIDFIALMSKASQGIYIERNDETAVAARHNIPLLLNEGKDVNILTGDFKEYLPLIKTFHPDYIYV 169 (410)
T ss_dssp TTCEEEESSCSSSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHSCTTCEEEEEESCGGGSHHHHHHHCCSEEEE
T ss_pred CCCEEEEeCCCchHHHHHHHhcCCEEEEEECCHHHHHHHHHhHHHhccCCCcEEEEECcHHHhhhhccCCCceEEEE
Confidence 368999999999 4555 556665542 15799999999873 22 5999998
No 287
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=79.86 E-value=1.2 Score=38.25 Aligned_cols=73 Identities=15% Similarity=0.159 Sum_probs=49.3
Q ss_pred CCceeeeccCccc---CC-----CCCeEEecc-cc--c--cCChHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCCC
Q 043585 188 ENLKYVADDMFQF---IP-----PADAYFFML-FF--H--AFGGEDSLKILKKCREAIAGNGQRGKVLIMDIVINEKEDE 254 (287)
Q Consensus 188 ~Ri~~~~gd~~~~---~p-----~~D~~~l~~-vl--h--~~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~ 254 (287)
.++++..||..+- .+ .+|++++=- .- | .|++ .+|+.+++.|+| ||.|+... .
T Consensus 150 ~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~~~p~lw~~----~~l~~l~~~L~p---GG~l~tys----a---- 214 (257)
T 2qy6_A 150 VTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAPAKNPDMWTQ----NLFNAMARLARP---GGTLATFT----S---- 214 (257)
T ss_dssp EEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTTTCGGGCCH----HHHHHHHHHEEE---EEEEEESC----C----
T ss_pred eEEEEEECcHHHHHhhcccccCCeEEEEEECCCCcccChhhcCH----HHHHHHHHHcCC---CcEEEEEe----C----
Confidence 3567888888762 22 479888731 11 1 2554 589999999999 88877522 1
Q ss_pred CCCCHHHHHHHHHhCCCcEEEEEec
Q 043585 255 DQRTDKEWKTLFLDAGFTCCKITTM 279 (287)
Q Consensus 255 ~~rt~~e~~~ll~~aGf~~~~~~~~ 279 (287)
...+++.|.++||++.++...
T Consensus 215 ----a~~vrr~L~~aGF~v~~~~g~ 235 (257)
T 2qy6_A 215 ----AGFVRRGLQEAGFTMQKRKGF 235 (257)
T ss_dssp ----BHHHHHHHHHHTEEEEEECCS
T ss_pred ----CHHHHHHHHHCCCEEEeCCCC
Confidence 136788899999998765443
No 288
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=78.35 E-value=2.6 Score=37.19 Aligned_cols=75 Identities=9% Similarity=-0.024 Sum_probs=46.9
Q ss_pred eeeeccCccc-C-CCCCeEEec-------cccccC--ChHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCCCCCCCH
Q 043585 191 KYVADDMFQF-I-PPADAYFFM-------LFFHAF--GGEDSLKILKKCREAIAGNGQRGKVLIMDIVINEKEDEDQRTD 259 (287)
Q Consensus 191 ~~~~gd~~~~-~-p~~D~~~l~-------~vlh~~--~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~~~rt~ 259 (287)
.++.||+.+. . ..+|+|+.= ++-++- +..-|...|.=+.+.|+| ||.+++- ..-.+ . .
T Consensus 155 ~~IqGD~~~~~~~~k~DLVISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~Lkp---GGsFvVK-VFQGs------g-~ 223 (344)
T 3r24_A 155 STLIGDCATVHTANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLAL---GGSIAVK-ITEHS------W-N 223 (344)
T ss_dssp EEEESCGGGEEESSCEEEEEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEE---EEEEEEE-ECSSS------C-C
T ss_pred eEEEccccccccCCCCCEEEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcC---CCEEEEE-EecCC------C-H
Confidence 5588997762 2 248888742 222222 344577888888999999 8888874 22221 1 2
Q ss_pred HHHHHHHHhCCCcEEEEEe
Q 043585 260 KEWKTLFLDAGFTCCKITT 278 (287)
Q Consensus 260 ~e~~~ll~~aGf~~~~~~~ 278 (287)
+++.++. + -|+.+++.+
T Consensus 224 ~~L~~lr-k-~F~~VK~fK 240 (344)
T 3r24_A 224 ADLYKLM-G-HFSWWTAFV 240 (344)
T ss_dssp HHHHHHH-T-TEEEEEEEE
T ss_pred HHHHHHH-h-hCCeEEEEC
Confidence 4555555 3 788888775
No 289
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=76.69 E-value=0.75 Score=51.89 Aligned_cols=70 Identities=14% Similarity=0.264 Sum_probs=31.4
Q ss_pred CCCeEEeccccccCChHHHHHHHHHHHHHhcCCCCCcEEEEEeeccC----CCCC---------CCCCCHHHHHHHHHhC
Q 043585 203 PADAYFFMLFFHAFGGEDSLKILKKCREAIAGNGQRGKVLIMDIVIN----EKED---------EDQRTDKEWKTLFLDA 269 (287)
Q Consensus 203 ~~D~~~l~~vlh~~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~----~~~~---------~~~rt~~e~~~ll~~a 269 (287)
.||+|+.+++||.-.+. ...|+++++.|+| ||++++.+.... .... ...-+.++|.++|.++
T Consensus 1311 ~ydlvia~~vl~~t~~~--~~~l~~~~~lL~p---~G~l~~~e~~~~~~~g~~~~~~~~~~r~~~~~~~~~~w~~~l~~~ 1385 (2512)
T 2vz8_A 1311 KADLLVCNCALATLGDP--AVAVGNMAATLKE---GGFLLLHTLLAGHPLGEMVGFLTSPEQGGRHLLSQDQWESLFAGA 1385 (2512)
T ss_dssp -CCEEEEECC-------------------------CCEEEEEEC--------------------------CTTTTSSTTT
T ss_pred ceeEEEEcccccccccH--HHHHHHHHHhcCC---CcEEEEEeccccccccccccccccccccCCcccCHHHHHHHHHhC
Confidence 49999999999976554 4688999999999 999998874320 0000 0223567899999999
Q ss_pred CCcEEEEE
Q 043585 270 GFTCCKIT 277 (287)
Q Consensus 270 Gf~~~~~~ 277 (287)
||..+...
T Consensus 1386 gf~~~~~~ 1393 (2512)
T 2vz8_A 1386 SLHLVALK 1393 (2512)
T ss_dssp TEEEEEEE
T ss_pred CCceeeec
Confidence 99876653
No 290
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=75.98 E-value=5.9 Score=31.17 Aligned_cols=68 Identities=16% Similarity=0.154 Sum_probs=42.5
Q ss_pred cCcceEEEecCcccccchhhhhc-CC--------CCCCceeeeccCcccCC----CCCeEEeccccccCChHHHHHHHHH
Q 043585 161 ERLGSMVDVGGGNVLDLPHAVAN-TP--------QTENLKYVADDMFQFIP----PADAYFFMLFFHAFGGEDSLKILKK 227 (287)
Q Consensus 161 ~~~~~vlDvGgG~v~Dlp~vi~~-a~--------~~~Ri~~~~gd~~~~~p----~~D~~~l~~vlh~~~d~~~~~iL~~ 227 (287)
....++|+||+|..++....++. .. ....+.++..|+|.|.. +||+|...+. +.|...-+.+
T Consensus 34 ~~~~rVlEVG~G~g~~vA~~La~~~g~~V~atDInp~Av~~v~dDiF~P~~~~Y~~~DLIYsirP-----P~El~~~i~~ 108 (153)
T 2k4m_A 34 GPGTRVVEVGAGRFLYVSDYIRKHSKVDLVLTDIKPSHGGIVRDDITSPRMEIYRGAALIYSIRP-----PAEIHSSLMR 108 (153)
T ss_dssp CSSSEEEEETCTTCCHHHHHHHHHSCCEEEEECSSCSSTTEECCCSSSCCHHHHTTEEEEEEESC-----CTTTHHHHHH
T ss_pred CCCCcEEEEccCCChHHHHHHHHhCCCeEEEEECCccccceEEccCCCCcccccCCcCEEEEcCC-----CHHHHHHHHH
Confidence 44579999999996555444432 11 02234499999999754 5888865553 3445555566
Q ss_pred HHHHhc
Q 043585 228 CREAIA 233 (287)
Q Consensus 228 ~~~al~ 233 (287)
+++...
T Consensus 109 lA~~v~ 114 (153)
T 2k4m_A 109 VADAVG 114 (153)
T ss_dssp HHHHHT
T ss_pred HHHHcC
Confidence 666554
No 291
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=73.28 E-value=1.2 Score=38.23 Aligned_cols=57 Identities=19% Similarity=0.228 Sum_probs=37.8
Q ss_pred cccCc--ceEEEecCcc---------------cccc-hhh-------hhcCC----C-C---CCceeeeccCccc---CC
Q 043585 159 LIERL--GSMVDVGGGN---------------VLDL-PHA-------VANTP----Q-T---ENLKYVADDMFQF---IP 202 (287)
Q Consensus 159 ~~~~~--~~vlDvGgG~---------------v~Dl-p~v-------i~~a~----~-~---~Ri~~~~gd~~~~---~p 202 (287)
...+. .+|||+|||. .+|. |.+ ++.++ . . +|++++.+|..+- ++
T Consensus 83 ~l~~g~~~~VLDl~~G~G~dal~lA~~g~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~~~L~~~~ 162 (258)
T 2oyr_A 83 GIKGDYLPDVVDATAGLGRDAFVLASVGCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTDIT 162 (258)
T ss_dssp TCBTTBCCCEEETTCTTCHHHHHHHHHTCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHHHSTTCS
T ss_pred cccCCCCCEEEEcCCcCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHHHHHHhCc
Confidence 34455 7999999999 5665 322 22221 1 1 5899999998773 23
Q ss_pred -CCCeEEecccccc
Q 043585 203 -PADAYFFMLFFHA 215 (287)
Q Consensus 203 -~~D~~~l~~vlh~ 215 (287)
.+|+|++--..+.
T Consensus 163 ~~fDvV~lDP~y~~ 176 (258)
T 2oyr_A 163 PRPQVVYLDPMFPH 176 (258)
T ss_dssp SCCSEEEECCCCCC
T ss_pred ccCCEEEEcCCCCC
Confidence 4999998766654
No 292
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=72.99 E-value=1.4 Score=40.04 Aligned_cols=46 Identities=13% Similarity=0.036 Sum_probs=32.3
Q ss_pred ceeeeccCccc---CC-CCCeEEeccccccCChHHHHHHHHHHHHHhcCCCCCcEEEEE
Q 043585 190 LKYVADDMFQF---IP-PADAYFFMLFFHAFGGEDSLKILKKCREAIAGNGQRGKVLIM 244 (287)
Q Consensus 190 i~~~~gd~~~~---~p-~~D~~~l~~vlh~~~d~~~~~iL~~~~~al~~~~~~g~lli~ 244 (287)
++++.+|.... .+ .||+|++- -. .+ ...+|+.+.+.+++ +|.|++.
T Consensus 114 i~v~~~Da~~~~~~~~~~fD~I~lD-P~--~~---~~~~l~~a~~~lk~---gG~l~vt 163 (378)
T 2dul_A 114 IVINHDDANRLMAERHRYFHFIDLD-PF--GS---PMEFLDTALRSAKR---RGILGVT 163 (378)
T ss_dssp EEEEESCHHHHHHHSTTCEEEEEEC-CS--SC---CHHHHHHHHHHEEE---EEEEEEE
T ss_pred eEEEcCcHHHHHHhccCCCCEEEeC-CC--CC---HHHHHHHHHHhcCC---CCEEEEE
Confidence 88999998773 23 48998842 21 11 24788999999999 8866654
No 293
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=71.03 E-value=3.1 Score=36.76 Aligned_cols=72 Identities=19% Similarity=0.148 Sum_probs=47.5
Q ss_pred eeeeccCcccC---C--CCCeEEecc-----ccccCChHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCCCCCCCHH
Q 043585 191 KYVADDMFQFI---P--PADAYFFML-----FFHAFGGEDSLKILKKCREAIAGNGQRGKVLIMDIVINEKEDEDQRTDK 260 (287)
Q Consensus 191 ~~~~gd~~~~~---p--~~D~~~l~~-----vlh~~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~~~rt~~ 260 (287)
++.-||..+.+ + .+|++++=- .=..|++ .+++++++.++| ||++... . ...
T Consensus 169 ~l~~GDa~~~l~~l~~~~~Da~flDgFsP~kNPeLWs~----e~f~~l~~~~~p---gg~laTY----t--------aag 229 (308)
T 3vyw_A 169 KVLLGDARKRIKEVENFKADAVFHDAFSPYKNPELWTL----DFLSLIKERIDE---KGYWVSY----S--------SSL 229 (308)
T ss_dssp EEEESCHHHHGGGCCSCCEEEEEECCSCTTTSGGGGSH----HHHHHHHTTEEE---EEEEEES----C--------CCH
T ss_pred EEEechHHHHHhhhcccceeEEEeCCCCcccCcccCCH----HHHHHHHHHhCC---CcEEEEE----e--------CcH
Confidence 34566766532 2 267766622 2234665 599999999999 8877642 1 135
Q ss_pred HHHHHHHhCCCcEEEEEecCC
Q 043585 261 EWKTLFLDAGFTCCKITTMFG 281 (287)
Q Consensus 261 e~~~ll~~aGf~~~~~~~~~~ 281 (287)
..++-|.+|||++.++...++
T Consensus 230 ~VRR~L~~aGF~V~k~~G~g~ 250 (308)
T 3vyw_A 230 SVRKSLLTLGFKVGSSREIGR 250 (308)
T ss_dssp HHHHHHHHTTCEEEEEECC--
T ss_pred HHHHHHHHCCCEEEecCCCCC
Confidence 788899999999988876544
No 294
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=66.82 E-value=12 Score=37.70 Aligned_cols=51 Identities=10% Similarity=0.104 Sum_probs=31.7
Q ss_pred HHHHHHHHHHhcCCCCCcEEEEEee--ccCCCCCCCCCCHHHHHHHHHhCCCcEEEEEecC
Q 043585 222 LKILKKCREAIAGNGQRGKVLIMDI--VINEKEDEDQRTDKEWKTLFLDAGFTCCKITTMF 280 (287)
Q Consensus 222 ~~iL~~~~~al~~~~~~g~lli~e~--~~~~~~~~~~rt~~e~~~ll~~aGf~~~~~~~~~ 280 (287)
..+++++.+.|++ ||++.++-+ ++.. .....+.++++|-+. +.+..++.++
T Consensus 445 ~aFIe~Al~lLKp---GGrLAfIlP~s~Lf~----sg~~~kkLRk~LLe~-~~I~aIIdLP 497 (878)
T 3s1s_A 445 ALFLELVTELVQD---GTVISAIMPKQYLTA----QGNESKAFREFLVGN-FGLEHIFLYP 497 (878)
T ss_dssp HHHHHHHHHHSCT---TCEEEEEEETHHHHC----CSHHHHHHHHHHTTT-TCEEEEEECC
T ss_pred HHHHHHHHHhcCC---CcEEEEEEChHHhcc----CChHHHHHHHHHHhC-CCeEEEEECC
Confidence 3478889999999 899887643 2211 011256777777655 4455666554
No 295
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=63.32 E-value=3.7 Score=39.22 Aligned_cols=86 Identities=14% Similarity=0.152 Sum_probs=53.8
Q ss_pred CCceeeeccCcc-c-CC--CCCeEEeccccc--cCChHH-------------------------HHHHHHHHHHHhcCCC
Q 043585 188 ENLKYVADDMFQ-F-IP--PADAYFFMLFFH--AFGGED-------------------------SLKILKKCREAIAGNG 236 (287)
Q Consensus 188 ~Ri~~~~gd~~~-~-~p--~~D~~~l~~vlh--~~~d~~-------------------------~~~iL~~~~~al~~~~ 236 (287)
.+|.+..+|.+. + .+ .+|+|+..=-+. .|..+. ....++++.+.|+|
T Consensus 310 ~~i~i~~gDtL~~~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~-- 387 (544)
T 3khk_A 310 FNFGKKNADSFLDDQHPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYHLAP-- 387 (544)
T ss_dssp CBCCSSSCCTTTSCSCTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHTEEE--
T ss_pred cccceeccchhcCcccccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHHhcc--
Confidence 345568899887 3 22 499998853332 232211 13688999999999
Q ss_pred CCcEEEEEee--ccCCCCCCCCCCHHHHHHHHHhCCCcEEEEEecCC
Q 043585 237 QRGKVLIMDI--VINEKEDEDQRTDKEWKTLFLDAGFTCCKITTMFG 281 (287)
Q Consensus 237 ~~g~lli~e~--~~~~~~~~~~rt~~e~~~ll~~aGf~~~~~~~~~~ 281 (287)
||++.++-+ ++.. ..-..+.++++|-+.+. +..++.+++
T Consensus 388 -gGr~aiVlP~g~L~~----~~~~~~~iRk~Lle~~~-l~aII~LP~ 428 (544)
T 3khk_A 388 -TGSMALLLANGSMSS----NTNNEGEIRKTLVEQDL-VECMVALPG 428 (544)
T ss_dssp -EEEEEEEEETHHHHC----CGGGHHHHHHHHHHTTC-EEEEEECCT
T ss_pred -CceEEEEecchhhhc----CcchHHHHHHHHHhCCc-HhEEEECCC
Confidence 999877632 3321 11246788888887754 666666653
No 296
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=63.24 E-value=7.6 Score=37.02 Aligned_cols=110 Identities=14% Similarity=0.118 Sum_probs=66.8
Q ss_pred CcceEEEecCcc--------------------cccc-hhhhhcCCC--------CCCceeeeccCccc-CC-----CCCe
Q 043585 162 RLGSMVDVGGGN--------------------VLDL-PHAVANTPQ--------TENLKYVADDMFQF-IP-----PADA 206 (287)
Q Consensus 162 ~~~~vlDvGgG~--------------------v~Dl-p~vi~~a~~--------~~Ri~~~~gd~~~~-~p-----~~D~ 206 (287)
...+|+|.+||+ .+|+ |.++..|+. .+++.+..+|.+.. .| .+|+
T Consensus 221 ~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~~~~I~~gDtL~~d~p~~~~~~fD~ 300 (542)
T 3lkd_A 221 QGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVPIENQFLHNADTLDEDWPTQEPTNFDG 300 (542)
T ss_dssp TTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCTTTSCSCCSSCCCBSE
T ss_pred CCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCCcCccceEecceecccccccccccccE
Confidence 467999999999 2232 333333321 24678899999874 22 4999
Q ss_pred EEeccccc-cCC---------------------hHHHHHHHHHHHHHhc-CCCCCcEEEEEee--ccCCCCCCCCCCHHH
Q 043585 207 YFFMLFFH-AFG---------------------GEDSLKILKKCREAIA-GNGQRGKVLIMDI--VINEKEDEDQRTDKE 261 (287)
Q Consensus 207 ~~l~~vlh-~~~---------------------d~~~~~iL~~~~~al~-~~~~~g~lli~e~--~~~~~~~~~~rt~~e 261 (287)
|+..=-+. .|. +.+ ...+.++.+.|+ + ||++.++-+ ++.. .-....
T Consensus 301 IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~-~~Fl~~~l~~Lk~~---gGr~a~VlP~g~Lf~-----~~~~~~ 371 (542)
T 3lkd_A 301 VLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKAD-FAFLLHGYYHLKQD---NGVMAIVLPHGVLFR-----GNAEGT 371 (542)
T ss_dssp EEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCH-HHHHHHHHHTBCTT---TCEEEEEEETHHHHC-----CTHHHH
T ss_pred EEecCCcCCccccchhhhhhhhhhhhhhcCCCchhh-HHHHHHHHHHhCCC---ceeEEEEecchHhhC-----CchhHH
Confidence 98652111 121 111 358899999999 8 899876533 2221 112577
Q ss_pred HHHHHHhCCCcEEEEEecCC
Q 043585 262 WKTLFLDAGFTCCKITTMFG 281 (287)
Q Consensus 262 ~~~ll~~aGf~~~~~~~~~~ 281 (287)
++++|-+.+ .+..++.+++
T Consensus 372 iRk~Lle~~-~l~~II~LP~ 390 (542)
T 3lkd_A 372 IRKALLEEG-AIDTVIGLPA 390 (542)
T ss_dssp HHHHHHHTT-CEEEEEECCS
T ss_pred HHHHHHhCC-ceeEEEEccc
Confidence 888887774 4556666653
No 297
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=62.64 E-value=22 Score=29.18 Aligned_cols=78 Identities=12% Similarity=0.036 Sum_probs=46.0
Q ss_pred ccCcceEEEecCcc--------------cccc-hhhhhcCC-------C--CCCceeeeccCccc---------------
Q 043585 160 IERLGSMVDVGGGN--------------VLDL-PHAVANTP-------Q--TENLKYVADDMFQF--------------- 200 (287)
Q Consensus 160 ~~~~~~vlDvGgG~--------------v~Dl-p~vi~~a~-------~--~~Ri~~~~gd~~~~--------------- 200 (287)
..+.++||+||+|. -+|. ++-.+.++ - .+||+++.||..+-
T Consensus 28 l~~a~~VLEiGtGySTl~lA~~~~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~~~wg~p~~~~~~~~l 107 (202)
T 3cvo_A 28 YEEAEVILEYGSGGSTVVAAELPGKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGPTGDWGHPVSDAKWRSY 107 (202)
T ss_dssp HHHCSEEEEESCSHHHHHHHTSTTCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSSBCGGGCBSSSTTGGGT
T ss_pred hhCCCEEEEECchHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchhhhcccccccchhhhhH
Confidence 35678899999988 1221 22222222 2 46899999985321
Q ss_pred ---------C---CCCCeEEeccccccCChHHHHHHHHHHHHHhcCCCCCcEEEEEeecc
Q 043585 201 ---------I---PPADAYFFMLFFHAFGGEDSLKILKKCREAIAGNGQRGKVLIMDIVI 248 (287)
Q Consensus 201 ---------~---p~~D~~~l~~vlh~~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~ 248 (287)
. ..||+|++=--- . ...+..+.+.|+| ||.| |+|.+.
T Consensus 108 ~~~~~~i~~~~~~~~fDlIfIDg~k---~----~~~~~~~l~~l~~---GG~I-v~DNv~ 156 (202)
T 3cvo_A 108 PDYPLAVWRTEGFRHPDVVLVDGRF---R----VGCALATAFSITR---PVTL-LFDDYS 156 (202)
T ss_dssp THHHHGGGGCTTCCCCSEEEECSSS---H----HHHHHHHHHHCSS---CEEE-EETTGG
T ss_pred HHHhhhhhccccCCCCCEEEEeCCC---c----hhHHHHHHHhcCC---CeEE-EEeCCc
Confidence 2 248999886521 1 1334445578898 6655 667654
No 298
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=62.45 E-value=15 Score=31.79 Aligned_cols=87 Identities=7% Similarity=0.066 Sum_probs=50.8
Q ss_pred CCCceeeeccCccc---CC--CCCeEEecccccc---CCh---------------HHHHHHHHHHHHHhcCCCCCcEEEE
Q 043585 187 TENLKYVADDMFQF---IP--PADAYFFMLFFHA---FGG---------------EDSLKILKKCREAIAGNGQRGKVLI 243 (287)
Q Consensus 187 ~~Ri~~~~gd~~~~---~p--~~D~~~l~~vlh~---~~d---------------~~~~~iL~~~~~al~~~~~~g~lli 243 (287)
..+++++.||.++. +| .+|+|+..=-.+. +.+ +....+++.+++.|+| +|.+++
T Consensus 19 ~~~~~i~~gD~~~~l~~l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~---~G~l~i 95 (297)
T 2zig_A 19 FGVHRLHVGDAREVLASFPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVP---GGRLVI 95 (297)
T ss_dssp --CEEEEESCHHHHHTTSCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEE
T ss_pred ccCCEEEECcHHHHHhhCCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCC---CcEEEE
Confidence 35678888988872 34 3888877643321 111 1124688999999999 898877
Q ss_pred Eee--ccCCCCCC--CCCC-HHHHHHHHHhCCCcEEEE
Q 043585 244 MDI--VINEKEDE--DQRT-DKEWKTLFLDAGFTCCKI 276 (287)
Q Consensus 244 ~e~--~~~~~~~~--~~rt-~~e~~~ll~~aGf~~~~~ 276 (287)
.-. ..+..... .... ..++..+++++||.....
T Consensus 96 ~~~d~~~~~~~~g~~~~~~~~~~l~~~~~~~Gf~~~~~ 133 (297)
T 2zig_A 96 VVGDVAVARRRFGRHLVFPLHADIQVRCRKLGFDNLNP 133 (297)
T ss_dssp EECCEEEECC----EEEECHHHHHHHHHHHTTCEEEEE
T ss_pred EECCCccccccCCcccccccHHHHHHHHHHcCCeeecc
Confidence 522 11110000 0111 356888999999987653
No 299
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=53.41 E-value=34 Score=30.74 Aligned_cols=79 Identities=9% Similarity=0.070 Sum_probs=49.4
Q ss_pred CCceeeeccCccc----C-------CCCCeEEeccccccCC--------hHHHHHHHH---HHHHHhcCCCCCcEEEEEe
Q 043585 188 ENLKYVADDMFQF----I-------PPADAYFFMLFFHAFG--------GEDSLKILK---KCREAIAGNGQRGKVLIMD 245 (287)
Q Consensus 188 ~Ri~~~~gd~~~~----~-------p~~D~~~l~~vlh~~~--------d~~~~~iL~---~~~~al~~~~~~g~lli~e 245 (287)
+...++.+|+.+- + +.+|+++..--...|| |+.. .++. ++.+.++| +++|+|
T Consensus 45 ~~~~~~~~DI~~~~~~~~~~~~~~~~~~D~i~ggpPCQ~fS~ag~~~~~d~r~-~L~~~~~~~v~~~~P-----~~~v~E 118 (376)
T 3g7u_A 45 PRSLHVQEDVSLLNAEIIKGFFKNDMPIDGIIGGPPCQGFSSIGKGNPDDSRN-QLYMHFYRLVSELQP-----LFFLAE 118 (376)
T ss_dssp TTSEEECCCGGGCCHHHHHHHHCSCCCCCEEEECCCCCTTC-------CHHHH-HHHHHHHHHHHHHCC-----SEEEEE
T ss_pred CCCceEecChhhcCHHHHHhhcccCCCeeEEEecCCCCCcccccCCCCCCchH-HHHHHHHHHHHHhCC-----CEEEEe
Confidence 4456667776652 1 2488888877766665 3332 2332 34456677 789999
Q ss_pred eccCCCCCCCCCCHHHHHHHHHhCCCcE
Q 043585 246 IVINEKEDEDQRTDKEWKTLFLDAGFTC 273 (287)
Q Consensus 246 ~~~~~~~~~~~rt~~e~~~ll~~aGf~~ 273 (287)
.|..=.........+++. .|++.|+.+
T Consensus 119 NV~gl~s~~~~~~~~~i~-~l~~~GY~v 145 (376)
T 3g7u_A 119 NVPGIMQEKYSGIRNKAF-NLVSGDYDI 145 (376)
T ss_dssp ECTTTTCGGGHHHHHHHH-HHHHTTEEE
T ss_pred cchHhhccCcHHHHHHHH-HHHcCCCcc
Confidence 987543221233567777 889999987
No 300
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=50.92 E-value=18 Score=31.63 Aligned_cols=85 Identities=13% Similarity=0.086 Sum_probs=52.0
Q ss_pred CCCceeeeccCcc---cCC--CCCeEEeccccc-----cCCh-------HHHHHHHHHHHHHhcCCCCCcEEEEEee-cc
Q 043585 187 TENLKYVADDMFQ---FIP--PADAYFFMLFFH-----AFGG-------EDSLKILKKCREAIAGNGQRGKVLIMDI-VI 248 (287)
Q Consensus 187 ~~Ri~~~~gd~~~---~~p--~~D~~~l~~vlh-----~~~d-------~~~~~iL~~~~~al~~~~~~g~lli~e~-~~ 248 (287)
.++..++.||..+ .+| .+|+|++.=-.. +|++ +....+|+.+++.|+| +|.++|.-. ..
T Consensus 12 ~~~~~ii~gD~~~~l~~l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~---~G~i~i~~~d~~ 88 (323)
T 1boo_A 12 TSNGSMYIGDSLELLESFPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKP---DGSFVVDFGGAY 88 (323)
T ss_dssp CSSEEEEESCHHHHGGGSCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEE---EEEEEEEECCCE
T ss_pred cCCceEEeCcHHHHHhhCCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcC---CcEEEEEECCEe
Confidence 4567788888765 244 388888764332 1221 2456788999999999 888887522 11
Q ss_pred CCCCCC--CCCCHHHHHHHHHhCCCcEEE
Q 043585 249 NEKEDE--DQRTDKEWKTLFLDAGFTCCK 275 (287)
Q Consensus 249 ~~~~~~--~~rt~~e~~~ll~~aGf~~~~ 275 (287)
.+ +.+ .......+.++++.+||....
T Consensus 89 ~~-g~~~~~~~~~~~i~~~~~~~Gf~~~~ 116 (323)
T 1boo_A 89 MK-GVPARSIYNFRVLIRMIDEVGFFLAE 116 (323)
T ss_dssp ET-TEEEECCHHHHHHHHHHHTTCCEEEE
T ss_pred cC-CCcccccchHHHHHHHHHhCCCEEEE
Confidence 11 100 112345566778899998764
No 301
>4e5v_A Putative THUA-like protein; THUA-like proteins, trehalose utilisation, structural genomi center for structural genomics, JCSG; 1.75A {Parabacteroides merdae}
Probab=50.79 E-value=46 Score=28.64 Aligned_cols=59 Identities=15% Similarity=0.152 Sum_probs=38.0
Q ss_pred CCCCCeEEeccccccCChHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCCCCCCCHHHHHHHHHhCCC
Q 043585 201 IPPADAYFFMLFFHAFGGEDSLKILKKCREAIAGNGQRGKVLIMDIVINEKEDEDQRTDKEWKTLFLDAGF 271 (287)
Q Consensus 201 ~p~~D~~~l~~vlh~~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~~~rt~~e~~~ll~~aGf 271 (287)
+.+||+|++...-..|++++ .+.+.+.++. ||.++.+-..... .+...+|.+++--..|
T Consensus 56 L~~~D~vV~~~~~~~l~~~~----~~~l~~yV~~---Ggglv~~H~a~~~-----~~~w~~y~~liG~g~f 114 (281)
T 4e5v_A 56 FSPYQLVVLDYNGDSWPEET----NRRFLEYVQN---GGGVVIYHAADNA-----FSKWPEFNRICALGGW 114 (281)
T ss_dssp CTTCSEEEECCCSSCCCHHH----HHHHHHHHHT---TCEEEEEGGGGGS-----CTTCHHHHHHHSCBCC
T ss_pred hhcCCEEEEeCCCCcCCHHH----HHHHHHHHHc---CCCEEEEeccccc-----CCCCHHHHHheecccc
Confidence 44699999766545677654 4555566777 7777776654432 2445788888874445
No 302
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=48.95 E-value=21 Score=30.41 Aligned_cols=81 Identities=15% Similarity=0.213 Sum_probs=43.7
Q ss_pred cccCcceEEEecCcc-----------------cccchhhhhc---C-CC--CCCceeeec-cCcccCC-CCCeEEecccc
Q 043585 159 LIERLGSMVDVGGGN-----------------VLDLPHAVAN---T-PQ--TENLKYVAD-DMFQFIP-PADAYFFMLFF 213 (287)
Q Consensus 159 ~~~~~~~vlDvGgG~-----------------v~Dlp~vi~~---a-~~--~~Ri~~~~g-d~~~~~p-~~D~~~l~~vl 213 (287)
.+....+|||+|++. .+|+-..-.. . +. -.-|+|..+ |++.--| .+|++++---=
T Consensus 75 ~l~~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ghe~P~~~~s~gwn~v~fk~gvDv~~~~~~~~DtllcDIge 154 (267)
T 3p8z_A 75 MVIPEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGHEEPVPMSTYGWNIVKLMSGKDVFYLPPEKCDTLLCDIGE 154 (267)
T ss_dssp SSCCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTSCCCCCCCCTTTTSEEEECSCCGGGCCCCCCSEEEECCCC
T ss_pred CCCCCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCccCcchhhhcCcCceEEEeccceeecCCccccEEEEecCC
Confidence 455667999999988 2333111000 0 01 366899999 9876333 38887763322
Q ss_pred ccCC-hHHH---HHHHHHHHHHhcCCCCCcEEEE
Q 043585 214 HAFG-GEDS---LKILKKCREAIAGNGQRGKVLI 243 (287)
Q Consensus 214 h~~~-d~~~---~~iL~~~~~al~~~~~~g~lli 243 (287)
-.=+ .-|. .++|.-+.+-|++ |.++|
T Consensus 155 Ss~~~~vE~~RtlrvLela~~wL~~----~~fc~ 184 (267)
T 3p8z_A 155 SSPSPTVEESRTIRVLKMVEPWLKN----NQFCI 184 (267)
T ss_dssp CCSCHHHHHHHHHHHHHHHGGGCSS----CEEEE
T ss_pred CCCChhhhhhHHHHHHHHHHHhccc----CCEEE
Confidence 1111 1122 3355555566666 45555
No 303
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=37.55 E-value=62 Score=28.41 Aligned_cols=50 Identities=10% Similarity=0.142 Sum_probs=28.9
Q ss_pred ceeeec-cCcccCC-CCCeEEeccccccCC----hH-HHHHHHHHHHHHhcCCCCC-cEEEE
Q 043585 190 LKYVAD-DMFQFIP-PADAYFFMLFFHAFG----GE-DSLKILKKCREAIAGNGQR-GKVLI 243 (287)
Q Consensus 190 i~~~~g-d~~~~~p-~~D~~~l~~vlh~~~----d~-~~~~iL~~~~~al~~~~~~-g~lli 243 (287)
|.+..+ |++.-.| .+|++++- +=---+ |+ ...++|.-+.+-|++ + |.++|
T Consensus 145 V~~~~~~Dv~~l~~~~~D~ivcD-igeSs~~~~ve~~Rtl~vLel~~~wL~~---~~~~f~~ 202 (321)
T 3lkz_A 145 VTMKSGVDVFYRPSECCDTLLCD-IGESSSSAEVEEHRTIRVLEMVEDWLHR---GPREFCV 202 (321)
T ss_dssp EEEECSCCTTSSCCCCCSEEEEC-CCCCCSCHHHHHHHHHHHHHHHHHHHTT---CCCEEEE
T ss_pred eEEEeccCHhhCCCCCCCEEEEE-CccCCCChhhhhhHHHHHHHHHHHHhcc---CCCcEEE
Confidence 788888 8766323 48877653 222111 11 224466666788888 4 66666
No 304
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=31.40 E-value=17 Score=31.65 Aligned_cols=45 Identities=27% Similarity=0.260 Sum_probs=0.0
Q ss_pred hhhcccccccCcceEEEecCcc---------------cccc-hhhhhcCCC--CCCceeeeccCcc
Q 043585 152 VKDCCRTLIERLGSMVDVGGGN---------------VLDL-PHAVANTPQ--TENLKYVADDMFQ 199 (287)
Q Consensus 152 ~~~~~~~~~~~~~~vlDvGgG~---------------v~Dl-p~vi~~a~~--~~Ri~~~~gd~~~ 199 (287)
++.+ .......+||+++|. .+|. |..++.+++ .+|++++.+||.+
T Consensus 15 le~L---~~~~gg~~VD~T~G~GGHS~~il~~~g~VigiD~Dp~Ai~~A~~L~~~rv~lv~~~f~~ 77 (285)
T 1wg8_A 15 LDLL---AVRPGGVYVDATLGGAGHARGILERGGRVIGLDQDPEAVARAKGLHLPGLTVVQGNFRH 77 (285)
T ss_dssp HHHH---TCCTTCEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCTTEEEEESCGGG
T ss_pred HHhh---CCCCCCEEEEeCCCCcHHHHHHHHCCCEEEEEeCCHHHHHHHHhhccCCEEEEECCcch
No 305
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=30.22 E-value=27 Score=30.15 Aligned_cols=74 Identities=8% Similarity=0.007 Sum_probs=48.3
Q ss_pred CCCceeeeccCcccCC-----CCCeEEeccccccCChHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCCCCCCCHHH
Q 043585 187 TENLKYVADDMFQFIP-----PADAYFFMLFFHAFGGEDSLKILKKCREAIAGNGQRGKVLIMDIVINEKEDEDQRTDKE 261 (287)
Q Consensus 187 ~~Ri~~~~gd~~~~~p-----~~D~~~l~~vlh~~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~~~rt~~e 261 (287)
.++|+++.||+.+.+| .+|++++=. ++ -+.....|..+...|+| | .++|+|.+..- + .+ .+-
T Consensus 188 ~~~I~li~Gda~etL~~~~~~~~d~vfIDa---D~-y~~~~~~Le~~~p~L~p---G-GiIv~DD~~~~-~--G~--~~A 254 (282)
T 2wk1_A 188 DEQVRFLPGWFKDTLPTAPIDTLAVLRMDG---DL-YESTWDTLTNLYPKVSV---G-GYVIVDDYMMC-P--PC--KDA 254 (282)
T ss_dssp STTEEEEESCHHHHSTTCCCCCEEEEEECC---CS-HHHHHHHHHHHGGGEEE---E-EEEEESSCTTC-H--HH--HHH
T ss_pred cCceEEEEeCHHHHHhhCCCCCEEEEEEcC---Cc-cccHHHHHHHHHhhcCC---C-EEEEEcCCCCC-H--HH--HHH
Confidence 3899999999988544 256655532 22 13356789999999999 4 56666665210 1 11 356
Q ss_pred HHHHHHhCCCcE
Q 043585 262 WKTLFLDAGFTC 273 (287)
Q Consensus 262 ~~~ll~~aGf~~ 273 (287)
|.+.+++.|++.
T Consensus 255 v~Ef~~~~~i~~ 266 (282)
T 2wk1_A 255 VDEYRAKFDIAD 266 (282)
T ss_dssp HHHHHHHTTCCS
T ss_pred HHHHHHhcCCce
Confidence 777788888765
No 306
>3fpn_A Geobacillus stearothermophilus UVRA interaction domain; UVRA, nucleotide excision repair, DNA repair, DNA binding protein; 1.80A {Geobacillus stearothermophilus}
Probab=28.30 E-value=96 Score=22.99 Aligned_cols=46 Identities=13% Similarity=0.237 Sum_probs=33.6
Q ss_pred HHHHHHHHHhcCCCCCcEEEEEeeccCCCCCCCCCCHHHHHHHHHhCCCcEEEE
Q 043585 223 KILKKCREAIAGNGQRGKVLIMDIVINEKEDEDQRTDKEWKTLFLDAGFTCCKI 276 (287)
Q Consensus 223 ~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~~~rt~~e~~~ll~~aGf~~~~~ 276 (287)
.|+.++. +++. |.++.|.-+++.. +-.+..+.-+++.+.||..+.+
T Consensus 8 qivd~il-~~~e---gtri~iLAPvv~~----rKg~~~~ll~~l~~~Gf~Rvrv 53 (119)
T 3fpn_A 8 QMVDRLL-SYPE---RTKMQILAPIVSG----KKGTHAKTLEDIRKQGYVRVRI 53 (119)
T ss_dssp HHHHHHH-TSCT---TCEEEEEEEEEEE----ECSCCHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHH-hCCC---CCEEEEEEEEeeC----CCCcHHHHHHHHHhCCCeEEEE
Confidence 4666664 4677 8999999888755 2335677788888999987654
No 307
>2cz4_A Hypothetical protein TTHA0516; conserved hypothetical protein, PII-like signaling protein, structural genomics, NPPSFA; 1.93A {Thermus thermophilus} SCOP: d.58.5.1
Probab=27.39 E-value=72 Score=23.62 Aligned_cols=29 Identities=17% Similarity=0.194 Sum_probs=22.8
Q ss_pred ChHHHHHHHHHHHHHhcCCCCCcEEEEEee
Q 043585 217 GGEDSLKILKKCREAIAGNGQRGKVLIMDI 246 (287)
Q Consensus 217 ~d~~~~~iL~~~~~al~~~~~~g~lli~e~ 246 (287)
+|+++.+++..+.+++.. +..|+++|.+-
T Consensus 82 ~de~ve~vv~~I~~~~~t-g~~GkIFV~~V 110 (119)
T 2cz4_A 82 SEEVALRILQRLQEEYFP-HYAVIAYVENV 110 (119)
T ss_dssp CHHHHHHHHHHHHHHTTT-TSCCEEEEEEE
T ss_pred CHHHHHHHHHHHHHHhcC-CCCEEEEEEEe
Confidence 788999999999977777 11299998764
No 308
>1lfp_A Hypothetical protein AQ_1575; NEW fold, thermostability, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 1.72A {Aquifex aeolicus} SCOP: e.39.1.1
Probab=27.12 E-value=27 Score=29.71 Aligned_cols=18 Identities=11% Similarity=0.119 Sum_probs=11.2
Q ss_pred CCHHHHHHHHHhCCCcEE
Q 043585 257 RTDKEWKTLFLDAGFTCC 274 (287)
Q Consensus 257 rt~~e~~~ll~~aGf~~~ 274 (287)
-+.++..+..-+||-..+
T Consensus 147 ~~ed~~le~aleaGAeDv 164 (249)
T 1lfp_A 147 VSEEELLEKAIEVGAEDV 164 (249)
T ss_dssp SCHHHHHHHHHHHTCSEE
T ss_pred CCHHHHHHHHHhcCCcee
Confidence 356666666666777644
No 309
>4f3q_A Transcriptional regulatory protein CBU_1566; YEBC family; 2.15A {Coxiella burnetii}
Probab=26.86 E-value=23 Score=30.15 Aligned_cols=64 Identities=8% Similarity=0.129 Sum_probs=34.3
Q ss_pred eEEeccccccCChHHHHHHHHHHHHHhcCCCCCcEEEE---EeeccCCCCC---CCCCCHHHHHHHHHhCCCcEEE
Q 043585 206 AYFFMLFFHAFGGEDSLKILKKCREAIAGNGQRGKVLI---MDIVINEKED---EDQRTDKEWKTLFLDAGFTCCK 275 (287)
Q Consensus 206 ~~~l~~vlh~~~d~~~~~iL~~~~~al~~~~~~g~lli---~e~~~~~~~~---~~~rt~~e~~~ll~~aGf~~~~ 275 (287)
+.++..+| +|.. -+-...++.+++.+ ||.|-- +-+..+..+- ....+.+++...+-++|-..+.
T Consensus 98 vaviVe~l---TDN~-nRT~~~vR~~f~K~--gG~lg~~GsV~~~F~~kG~i~~~~~~~~d~~~e~aieaGAeDv~ 167 (247)
T 4f3q_A 98 VAVMVDCL---TDNK-NRTVAEVRHAFSKC--DGNLGTEGSVAYLFKQRGLITFPPNSDEEKIMEIALEVGAEDVT 167 (247)
T ss_dssp CEEEEEEE---ESCH-HHHHHHHHHHHHHT--TCEECCTTSSGGGEEEEEEEEECTTCCHHHHHHHHHHHTCSEEE
T ss_pred eEEEEEEe---CCCH-hHHHHHHHHHHHhc--CceECCCCceeEEEeeeEEEEECCCCCHHHHHHHHHhCCCceee
Confidence 44444444 4433 35567888888874 665532 1122221110 0224778877777788887655
No 310
>1kon_A Protein YEBC, YEBC; alpha/beta, two-domains, montreal-kingston bacterial structural genomics initiative, BSGI, structural genomics; 2.20A {Escherichia coli} SCOP: e.39.1.1
Probab=26.55 E-value=27 Score=29.72 Aligned_cols=64 Identities=11% Similarity=0.111 Sum_probs=32.0
Q ss_pred eEEeccccccCChHHHHHHHHHHHHHhcCCCCCcEEEE---EeeccCCCCCC-CCC-CHHHHHHHHHhCCCcEEE
Q 043585 206 AYFFMLFFHAFGGEDSLKILKKCREAIAGNGQRGKVLI---MDIVINEKEDE-DQR-TDKEWKTLFLDAGFTCCK 275 (287)
Q Consensus 206 ~~~l~~vlh~~~d~~~~~iL~~~~~al~~~~~~g~lli---~e~~~~~~~~~-~~r-t~~e~~~ll~~aGf~~~~ 275 (287)
+.++..+|- |.. -+-...++.+++.+ ||.+-- +-+..+..+-- ... +.++..+..-+||-..+.
T Consensus 98 vaiiVe~lT---DN~-nRt~~~vR~~f~K~--GG~lg~~GsV~~~F~~kG~i~~~~~~ed~~le~aleaGAeDv~ 166 (249)
T 1kon_A 98 TAIMIECLS---DNR-NRTVAEVRHAFSKC--GGNLGTDGSVAYLFSKKGVISFEKGDEDTIMEAALEAGAEDVV 166 (249)
T ss_dssp EEEEEEEEE---SCH-HHHHHHHHHHHHTT--TCEECCTTSSGGGEEEEEEEEESSSCHHHHHHHHHHHTCSEEE
T ss_pred eEEEEEEec---CCH-HHHHHHHHHHHhhc--CceecCCCchhhhhheeeEEEECCCCHHHHHHHHHhCCCceee
Confidence 445555553 332 35667888888874 665531 11111110000 111 666776666677887543
No 311
>1mw7_A Hypothetical protein HP0162; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Helicobacter pylori} SCOP: e.39.1.1
Probab=24.11 E-value=26 Score=29.58 Aligned_cols=29 Identities=24% Similarity=0.365 Sum_probs=22.2
Q ss_pred CcEEEEEeeccCCCCCCCCCCHHHHHHHHHhCC
Q 043585 238 RGKVLIMDIVINEKEDEDQRTDKEWKTLFLDAG 270 (287)
Q Consensus 238 ~g~lli~e~~~~~~~~~~~rt~~e~~~ll~~aG 270 (287)
||.-+|+|...+. +.||..+.+.+|.+.|
T Consensus 89 gGvaiiVe~lTDN----~nRt~~~vR~~f~K~g 117 (240)
T 1mw7_A 89 FGVLIIMECMTDN----PTRTIANLKSYFNKTQ 117 (240)
T ss_dssp TTEEEEEEEEESC----HHHHHHHHHHHHTTST
T ss_pred CceEEEEEEecCC----HHHHHHHHHHHHhhcC
Confidence 7777777777776 6777788888887776
No 312
>1ssz_A Pulmonary surfactant-associated protein B; LUNG surfactant protein, saposin, surface active protein; NMR {Synthetic}
Probab=23.26 E-value=37 Score=18.71 Aligned_cols=19 Identities=21% Similarity=0.454 Sum_probs=14.1
Q ss_pred HHHHHHHHHHHhcCCCCCcEEE
Q 043585 221 SLKILKKCREAIAGNGQRGKVL 242 (287)
Q Consensus 221 ~~~iL~~~~~al~~~~~~g~ll 242 (287)
|..+++++-..++. +|+.+
T Consensus 4 cr~likriqa~ipk---~grml 22 (34)
T 1ssz_A 4 CRALIKRIQAMIPK---GGRML 22 (34)
T ss_dssp HHHHHHHHHHHCSS---SCCCC
T ss_pred HHHHHHHHHHHccc---cchhh
Confidence 67888998666666 78754
No 313
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=22.02 E-value=1.5e+02 Score=21.19 Aligned_cols=63 Identities=22% Similarity=0.278 Sum_probs=32.8
Q ss_pred CceeeeccCccc-------CCCCCeEEeccccccCChHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCCCCCCCHHH
Q 043585 189 NLKYVADDMFQF-------IPPADAYFFMLFFHAFGGEDSLKILKKCREAIAGNGQRGKVLIMDIVINEKEDEDQRTDKE 261 (287)
Q Consensus 189 Ri~~~~gd~~~~-------~p~~D~~~l~~vlh~~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~~~rt~~e 261 (287)
.+.++.+|..++ ..++|+++..- ++++....+..+.+.+.+ +++++. ... . +
T Consensus 48 ~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~-----~~~~~~~~~~~~~~~~~~----~~ii~~---~~~-~--------~ 106 (140)
T 1lss_A 48 DALVINGDCTKIKTLEDAGIEDADMYIAVT-----GKEEVNLMSSLLAKSYGI----NKTIAR---ISE-I--------E 106 (140)
T ss_dssp SSEEEESCTTSHHHHHHTTTTTCSEEEECC-----SCHHHHHHHHHHHHHTTC----CCEEEE---CSS-T--------T
T ss_pred CcEEEEcCCCCHHHHHHcCcccCCEEEEee-----CCchHHHHHHHHHHHcCC----CEEEEE---ecC-H--------h
Confidence 455666776432 23588887763 222223344445556776 465542 111 0 2
Q ss_pred HHHHHHhCCCc
Q 043585 262 WKTLFLDAGFT 272 (287)
Q Consensus 262 ~~~ll~~aGf~ 272 (287)
+.+.++++|..
T Consensus 107 ~~~~l~~~g~~ 117 (140)
T 1lss_A 107 YKDVFERLGVD 117 (140)
T ss_dssp HHHHHHHTTCS
T ss_pred HHHHHHHcCCC
Confidence 34567788875
No 314
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=21.47 E-value=1.1e+02 Score=26.77 Aligned_cols=83 Identities=10% Similarity=0.067 Sum_probs=45.9
Q ss_pred CCceeeeccCccc----CC--CCCeEEeccccccCChH--------HHHHHHHHHHHHhcCCCCC--cEEEEEeeccCCC
Q 043585 188 ENLKYVADDMFQF----IP--PADAYFFMLFFHAFGGE--------DSLKILKKCREAIAGNGQR--GKVLIMDIVINEK 251 (287)
Q Consensus 188 ~Ri~~~~gd~~~~----~p--~~D~~~l~~vlh~~~d~--------~~~~iL~~~~~al~~~~~~--g~lli~e~~~~~~ 251 (287)
+...++.+|+.+- ++ .+|+++..--...||-. ..-.++..+.+.++.. . =+++++|.|..=.
T Consensus 47 ~~~~~~~~Di~~~~~~~~~~~~~D~l~~gpPCq~fS~ag~~~g~~d~r~~l~~~~~~~i~~~--~~~P~~~~~ENV~~l~ 124 (343)
T 1g55_A 47 PHTQLLAKTIEGITLEEFDRLSFDMILMSPPCQPFTRIGRQGDMTDSRTNSFLHILDILPRL--QKLPKYILLENVKGFE 124 (343)
T ss_dssp TTSCEECSCGGGCCHHHHHHHCCSEEEECCC------------------CHHHHHHHHGGGC--SSCCSEEEEEEETTGG
T ss_pred cccccccCCHHHccHhHcCcCCcCEEEEcCCCcchhhcCCcCCccCccchHHHHHHHHHHHh--cCCCCEEEEeCCcccc
Confidence 3445677887762 23 58999888776555432 1112444333333321 1 2688889887521
Q ss_pred CCCCCCCHHHHHHHHHhCCCcEEE
Q 043585 252 EDEDQRTDKEWKTLFLDAGFTCCK 275 (287)
Q Consensus 252 ~~~~~rt~~e~~~ll~~aGf~~~~ 275 (287)
...+.+.+.+.|++.|+.+..
T Consensus 125 ---~~~~~~~i~~~l~~~GY~v~~ 145 (343)
T 1g55_A 125 ---VSSTRDLLIQTIENCGFQYQE 145 (343)
T ss_dssp ---GSHHHHHHHHHHHHTTEEEEE
T ss_pred ---CHHHHHHHHHHHHHCCCeeEE
Confidence 124678899999999998754
No 315
>2c71_A Glycoside hydrolase, family 11\:clostridium cellulosome enzyme, dockerin type I\:polysaccharide...; acetyl-xylan, esterases, metal-ION; 1.05A {Clostridium thermocellum} SCOP: c.6.2.3 PDB: 2c79_A
Probab=21.31 E-value=1e+02 Score=24.97 Aligned_cols=55 Identities=11% Similarity=0.101 Sum_probs=33.4
Q ss_pred cCC-hHHHHHHHHHHHHHhcCCCCCcEEEEEeeccCCCCCCCCCC---HHHHHHHHHhCCCcEEEEE
Q 043585 215 AFG-GEDSLKILKKCREAIAGNGQRGKVLIMDIVINEKEDEDQRT---DKEWKTLFLDAGFTCCKIT 277 (287)
Q Consensus 215 ~~~-d~~~~~iL~~~~~al~~~~~~g~lli~e~~~~~~~~~~~rt---~~e~~~ll~~aGf~~~~~~ 277 (287)
||. ......|.+++.+.+++ |.-|+++|.. +. ...| ..++.+.|++.||+.+.+-
T Consensus 128 Dw~~~~~~~~i~~~v~~~~~~---g~IiL~Hd~~-~~----~~~t~~al~~ii~~l~~~Gy~fvtl~ 186 (216)
T 2c71_A 128 DWIPSTTAEQRAAAVINGVRD---GTIILLHDVQ-PE----PHPTPEALDIIIPTLKSRGYEFVTLT 186 (216)
T ss_dssp TTCTTSCHHHHHHHHHHHCCT---TBEEEEESCC-SS----SCCHHHHHHHHHHHHHHTTCEECCHH
T ss_pred cccCCCCHHHHHHHHHhcCCC---CcEEEEECCC-CC----hHHHHHHHHHHHHHHHHCCCEEEEhH
Confidence 454 33455788888888888 6665555431 11 2233 4556666778899876543
No 316
>4gbu_A NADPH dehydrogenase 1; alpha/beta barrel, enenone reductase, alkene reductase, NADP oxidoreductase, carvone, enenatioselectivity; HET: 0WV 1PE FMN; 1.18A {Saccharomyces pastorianus} PDB: 4ge8_A* 1oya_A* 1oyb_A* 1oyc_A* 3tx9_A* 3rnd_A* 1k02_A* 1k03_A* 1bwk_A* 1bwl_A*
Probab=21.16 E-value=1.8e+02 Score=26.10 Aligned_cols=67 Identities=18% Similarity=0.206 Sum_probs=43.0
Q ss_pred ccccCChHHHHHHHHHHHHHhcCCCCCcEEEEEeecc-C------------------CCCC----------------CCC
Q 043585 212 FFHAFGGEDSLKILKKCREAIAGNGQRGKVLIMDIVI-N------------------EKED----------------EDQ 256 (287)
Q Consensus 212 vlh~~~d~~~~~iL~~~~~al~~~~~~g~lli~e~~~-~------------------~~~~----------------~~~ 256 (287)
.+.-|+|++ +.-++++.+++..+ |+++++ .-.- . .... +++
T Consensus 86 ~~gi~~d~~-i~~~k~l~davH~~--G~~i~~-QL~H~Gr~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~pr~ 161 (400)
T 4gbu_A 86 APGVWSEEQ-MVEWTKIFNAIHEK--KSFVWV-QLAVLGWAAFPDNLARDGLRYDSASDNVFMDAEQEAKAKKANNPQHS 161 (400)
T ss_dssp SCBSSSHHH-HHHHHHHHHHHHHT--TCEEEE-EEECCGGGSCHHHHHHTTCCCEESCSSCCSCHHHHHHHHHTTCCCEE
T ss_pred CCccCCHHH-HHHHHHHHHHHHhc--CCceEE-eeeecCcccCccccccCCCcccCccccccCCCCcccccccCCCCCcc
Confidence 344577765 66789999999983 555554 3210 0 0000 044
Q ss_pred CCHHHHHHHH----------HhCCCcEEEEEecCCc
Q 043585 257 RTDKEWKTLF----------LDAGFTCCKITTMFGL 282 (287)
Q Consensus 257 rt~~e~~~ll----------~~aGf~~~~~~~~~~~ 282 (287)
-|.+|++++. .+|||..++++..+|+
T Consensus 162 mt~~eI~~ii~~F~~AA~rA~~AGFDgVEIH~AhGY 197 (400)
T 4gbu_A 162 LTKDEIKQYIKEYVQAAKNSIAAGADGVEIHSANGY 197 (400)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCTTS
T ss_pred CCHHHHHHHHHHHHHHHHHHHhcCcCeeeecccccc
Confidence 5777777665 4789999999988876
Done!