Query 043588
Match_columns 397
No_of_seqs 241 out of 1687
Neff 8.8
Searched_HMMs 29240
Date Mon Mar 25 10:47:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043588.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/043588hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3jur_A EXO-poly-alpha-D-galact 100.0 8.6E-64 2.9E-68 494.0 39.2 338 24-382 19-421 (448)
2 1rmg_A Rgase A, rhamnogalactur 100.0 1.4E-59 4.7E-64 462.5 39.3 331 29-386 17-356 (422)
3 1bhe_A PEHA, polygalacturonase 100.0 7.5E-58 2.6E-62 445.6 39.0 327 30-385 12-374 (376)
4 1czf_A Polygalacturonase II; b 100.0 2.6E-57 8.9E-62 437.4 34.2 321 31-385 28-358 (362)
5 2uvf_A Exopolygalacturonase; G 100.0 1.3E-55 4.4E-60 452.7 38.7 353 29-395 153-608 (608)
6 2iq7_A Endopolygalacturonase; 100.0 4.1E-55 1.4E-59 419.8 34.3 319 47-386 6-334 (339)
7 1nhc_A Polygalacturonase I; be 100.0 4.2E-55 1.4E-59 419.2 33.9 318 46-385 5-332 (336)
8 1hg8_A Endopolygalacturonase; 100.0 1.4E-54 4.6E-59 417.2 37.4 320 47-385 6-345 (349)
9 1ia5_A Polygalacturonase; glyc 100.0 2.5E-54 8.6E-59 414.0 35.9 315 48-385 11-335 (339)
10 1k5c_A Endopolygalacturonase; 100.0 8.4E-54 2.9E-58 408.8 23.7 307 49-383 8-327 (335)
11 2x6w_A Tail spike protein; vir 100.0 7.1E-47 2.4E-51 375.3 19.8 292 30-373 49-385 (600)
12 1x0c_A Isopullulanase; glycosi 100.0 2.6E-40 8.9E-45 333.5 20.0 302 34-371 144-520 (549)
13 3gq8_A Preneck appendage prote 100.0 5.9E-38 2E-42 313.1 26.6 269 30-344 20-309 (609)
14 1h80_A IOTA-carrageenase; hydr 100.0 1.5E-37 5.2E-42 306.3 28.1 298 27-371 16-360 (464)
15 1ogo_X Dextranase; hydrolase, 100.0 8.9E-38 3.1E-42 314.6 27.0 266 63-371 229-545 (574)
16 3gqn_A Preneck appendage prote 100.0 1.2E-37 4.1E-42 315.2 24.7 269 30-344 20-309 (772)
17 2pyg_A Poly(beta-D-mannuronate 100.0 4.2E-29 1.4E-33 243.8 27.7 190 32-245 2-217 (377)
18 2vbk_A Tailspike-protein; vira 100.0 6.3E-31 2.1E-35 248.2 14.0 206 31-276 50-286 (514)
19 3jur_A EXO-poly-alpha-D-galact 99.9 2E-24 6.8E-29 213.1 24.4 227 113-371 191-443 (448)
20 3eqn_A Glucan 1,3-beta-glucosi 99.9 1.7E-22 5.7E-27 205.0 25.6 264 31-343 48-329 (758)
21 2uvf_A Exopolygalacturonase; G 99.9 1E-21 3.5E-26 201.4 29.3 223 113-370 332-583 (608)
22 1ia5_A Polygalacturonase; glyc 99.9 3.8E-20 1.3E-24 177.0 29.1 202 153-380 66-306 (339)
23 2iq7_A Endopolygalacturonase; 99.9 7.5E-20 2.6E-24 175.0 29.1 195 153-373 62-295 (339)
24 1czf_A Polygalacturonase II; b 99.9 3.9E-20 1.4E-24 178.1 27.0 194 153-373 89-320 (362)
25 1nhc_A Polygalacturonase I; be 99.9 1.4E-19 4.7E-24 173.0 28.9 201 153-380 62-303 (336)
26 1bhe_A PEHA, polygalacturonase 99.9 1.8E-19 6.2E-24 175.0 29.6 218 90-344 110-364 (376)
27 1hg8_A Endopolygalacturonase; 99.9 4.9E-19 1.7E-23 169.8 28.3 217 90-344 70-334 (349)
28 1k5c_A Endopolygalacturonase; 99.8 1.6E-18 5.3E-23 165.2 23.6 189 153-370 60-286 (335)
29 1rmg_A Rgase A, rhamnogalactur 99.8 8.9E-18 3.1E-22 165.0 27.9 169 175-372 128-310 (422)
30 1x0c_A Isopullulanase; glycosi 99.8 7.4E-18 2.5E-22 170.0 22.0 249 63-344 220-521 (549)
31 1ogo_X Dextranase; hydrolase, 99.8 1.7E-17 5.6E-22 167.3 22.8 234 64-344 263-546 (574)
32 2inu_A Insulin fructotransfera 99.7 1.6E-15 5.6E-20 144.1 17.2 225 28-283 10-283 (410)
33 3gq8_A Preneck appendage prote 99.5 9.5E-12 3.2E-16 124.7 27.4 220 113-371 135-399 (609)
34 3gqn_A Preneck appendage prote 99.5 1.5E-11 5E-16 125.3 26.6 220 113-371 135-399 (772)
35 1ru4_A Pectate lyase, PEL9A; p 99.4 1.1E-11 3.6E-16 120.6 20.8 252 24-312 8-299 (400)
36 1h80_A IOTA-carrageenase; hydr 99.4 7.3E-12 2.5E-16 123.5 18.4 158 157-352 106-278 (464)
37 2x6w_A Tail spike protein; vir 99.4 9.5E-12 3.2E-16 124.1 17.5 226 90-368 151-408 (600)
38 2pyg_A Poly(beta-D-mannuronate 99.4 3.5E-11 1.2E-15 116.9 21.0 211 119-372 132-360 (377)
39 1dbg_A Chondroitinase B; beta 99.4 4.1E-11 1.4E-15 119.2 21.2 274 48-370 30-348 (506)
40 3eqn_A Glucan 1,3-beta-glucosi 99.3 3.2E-11 1.1E-15 122.9 16.3 94 30-131 398-498 (758)
41 3uw0_A Pectinesterase; right-h 98.9 5.2E-08 1.8E-12 92.9 17.8 182 47-275 42-255 (364)
42 1pcl_A Pectate lyase E; lyase 98.8 1.1E-06 3.6E-11 83.8 21.4 76 200-275 132-227 (355)
43 1pxz_A Major pollen allergen J 98.7 4.1E-07 1.4E-11 86.4 16.9 114 154-275 108-226 (346)
44 2qy1_A Pectate lyase II; GAG l 98.7 8E-07 2.7E-11 84.0 18.5 92 182-274 94-203 (330)
45 3zsc_A Pectate trisaccharide-l 98.7 1.3E-06 4.6E-11 82.2 18.8 76 200-275 115-194 (340)
46 1idk_A Pectin lyase A; signal, 98.6 6.8E-07 2.3E-11 85.2 16.2 91 177-275 126-233 (359)
47 1gq8_A Pectinesterase; hydrola 98.6 1.5E-06 5.1E-11 81.6 17.5 202 48-305 18-243 (319)
48 3zsc_A Pectate trisaccharide-l 98.6 2.8E-06 9.6E-11 80.0 19.1 134 153-307 84-251 (340)
49 3vmv_A Pectate lyase; polysacc 98.6 3.1E-06 1.1E-10 79.4 19.1 136 180-339 100-249 (326)
50 1pxz_A Major pollen allergen J 98.6 8.7E-07 3E-11 84.2 15.1 111 173-306 149-272 (346)
51 1qcx_A Pectin lyase B; beta-he 98.6 1.7E-06 5.9E-11 82.5 16.8 64 181-244 131-198 (359)
52 1xg2_A Pectinesterase 1; prote 98.6 1E-06 3.6E-11 82.5 15.0 201 48-305 14-239 (317)
53 1air_A Pectate lyase C, PELC; 98.5 2E-06 6.9E-11 81.8 16.0 71 200-274 129-214 (353)
54 1air_A Pectate lyase C, PELC; 98.5 2.4E-06 8.1E-11 81.3 16.4 213 47-310 24-265 (353)
55 2qy1_A Pectate lyase II; GAG l 98.5 3.3E-06 1.1E-10 79.8 16.5 205 48-310 22-254 (330)
56 2nsp_A Pectinesterase A; micha 98.4 2E-05 6.8E-10 74.7 17.9 148 48-243 17-191 (342)
57 1vbl_A Pectate lyase 47; PL 47 98.3 2.9E-06 9.9E-11 82.3 12.1 101 175-275 148-282 (416)
58 2x3h_A K5 lyase, K5A lyase; ba 98.3 0.00033 1.1E-08 63.4 23.9 229 31-298 63-309 (542)
59 2o04_A Pectate lyase, PL; hexa 98.2 5.7E-06 1.9E-10 79.8 11.6 100 175-275 143-276 (399)
60 1idk_A Pectin lyase A; signal, 98.2 3.7E-05 1.3E-09 73.2 16.9 136 153-310 125-284 (359)
61 2inu_A Insulin fructotransfera 98.2 4E-05 1.4E-09 73.1 16.9 130 160-311 136-281 (410)
62 1qcx_A Pectin lyase B; beta-he 98.2 6.6E-05 2.3E-09 71.5 17.4 134 154-309 126-283 (359)
63 1pe9_A Pectate lyase A; parall 98.2 1.3E-05 4.6E-10 76.2 12.3 96 180-275 111-238 (361)
64 1pe9_A Pectate lyase A; parall 98.0 6.3E-05 2.1E-09 71.6 14.1 111 154-274 105-259 (361)
65 3vmv_A Pectate lyase; polysacc 97.9 0.00076 2.6E-08 63.1 19.2 134 154-305 97-249 (326)
66 1pcl_A Pectate lyase E; lyase 97.9 0.0002 6.9E-09 68.0 15.4 113 153-275 97-249 (355)
67 1vbl_A Pectate lyase 47; PL 47 97.9 0.0001 3.6E-09 71.3 12.2 113 153-275 149-304 (416)
68 3grh_A YBHC, acyl-COA thioeste 97.7 0.0022 7.7E-08 61.6 18.7 47 48-97 88-136 (422)
69 2o04_A Pectate lyase, PL; hexa 97.7 0.0002 7E-09 69.0 11.4 112 153-275 144-298 (399)
70 1ru4_A Pectate lyase, PEL9A; p 97.6 0.00022 7.4E-09 69.1 9.7 140 153-311 109-275 (400)
71 2vbk_A Tailspike-protein; vira 97.2 0.0014 4.6E-08 62.8 9.2 124 90-250 147-290 (514)
72 3t9g_A Pectate lyase; PL3, par 96.6 0.13 4.5E-06 43.4 15.7 128 184-341 53-183 (196)
73 1gq8_A Pectinesterase; hydrola 96.5 0.02 7E-07 53.4 11.8 113 181-306 92-210 (319)
74 1xg2_A Pectinesterase 1; prote 96.4 0.021 7.3E-07 53.2 11.1 113 181-306 88-206 (317)
75 3t9g_A Pectate lyase; PL3, par 96.4 0.29 1E-05 41.3 16.7 133 159-307 51-183 (196)
76 1ee6_A Pectate lyase; parallel 96.2 0.16 5.5E-06 43.0 14.1 106 160-275 48-153 (197)
77 2nsp_A Pectinesterase A; micha 95.9 0.067 2.3E-06 50.4 11.6 112 181-305 94-230 (342)
78 1dbg_A Chondroitinase B; beta 95.8 0.057 2E-06 53.6 11.2 142 158-306 226-392 (506)
79 3uw0_A Pectinesterase; right-h 95.5 0.18 6.3E-06 47.7 13.3 114 180-305 119-255 (364)
80 3b4n_A Endo-pectate lyase; pec 95.5 0.94 3.2E-05 41.7 17.0 16 122-137 124-139 (344)
81 1ee6_A Pectate lyase; parallel 94.9 0.78 2.7E-05 38.9 13.6 109 183-311 48-159 (197)
82 3grh_A YBHC, acyl-COA thioeste 86.6 14 0.00049 35.3 14.1 40 155-194 196-244 (422)
83 3b4n_A Endo-pectate lyase; pec 85.9 9.5 0.00032 35.1 11.8 53 184-244 159-213 (344)
84 3ju4_A Endo-N-acetylneuraminid 84.7 0.4 1.4E-05 45.5 2.3 39 37-79 3-42 (670)
85 3riq_A Tailspike protein; righ 73.7 42 0.0014 31.8 11.9 16 151-166 145-160 (543)
86 2vfm_A Bifunctional tail prote 71.8 41 0.0014 31.1 11.2 81 210-306 270-374 (559)
87 2v5i_A Salmonella typhimurium 71.0 41 0.0014 31.2 11.0 81 210-306 273-377 (559)
88 2xc1_A Bifunctional tail prote 65.4 60 0.002 31.4 11.2 81 210-306 377-481 (666)
89 2vfm_A Bifunctional tail prote 58.0 31 0.0011 32.0 7.6 67 232-301 269-352 (559)
90 2v5i_A Salmonella typhimurium 56.6 29 0.001 32.1 7.2 67 232-301 272-355 (559)
91 2xc1_A Bifunctional tail prote 45.0 52 0.0018 31.8 7.1 67 232-301 376-459 (666)
92 2yuh_A Tubulin-specific chaper 44.2 38 0.0013 28.2 5.7 12 154-165 71-82 (179)
93 2x3h_A K5 lyase, K5A lyase; ba 43.1 1.9E+02 0.0066 26.2 11.4 22 263-284 166-188 (542)
94 2zzv_A ABC transporter, solute 28.7 45 0.0015 30.9 4.0 11 1-11 1-11 (361)
95 3bh7_B Protein XRP2; protein-p 28.2 1.4E+02 0.0047 27.8 7.1 9 154-162 83-91 (352)
96 2w7z_A EFSQNR, pentapeptide re 26.5 1.5E+02 0.0051 24.8 6.8 11 263-273 113-123 (214)
97 3riq_A Tailspike protein; righ 26.2 4E+02 0.014 25.2 9.7 13 182-194 262-274 (543)
No 1
>3jur_A EXO-poly-alpha-D-galacturonosidase; beta-helix, cell WALL biogenesis/degradation, glycosidase; 2.05A {Thermotoga maritima}
Probab=100.00 E-value=8.6e-64 Score=494.03 Aligned_cols=338 Identities=23% Similarity=0.388 Sum_probs=298.5
Q ss_pred hccccCceeEEeeccCccCCCCcchHHHHHHHHHHhhccCCCcEEEEcCceEEeeceeeeccCCCcceEEEEccEEEeec
Q 043588 24 ASSYATTTTYNVLSFGAKGNGVTDSTQAFAKAWDAACTSTESATINVPKGRYLLGSVAFKGDCKSSDITFRIDGTLVAPA 103 (397)
Q Consensus 24 ~~~~~~~~~~~v~d~GA~~dg~tddt~aiq~Ai~~a~~~~~g~~v~ip~G~Y~~~~~~l~~~~~s~~~~l~~~G~l~~~~ 103 (397)
..+...+..++|+||||+|||.+|||+|||+||++ |++.+|++|+||+|+|+++++.|+ | +++|+++|+|+++.
T Consensus 19 ~~p~~~~~~~~v~~~GA~gdg~tddt~Aiq~Ai~~-c~~~ggg~v~vP~G~yl~~~l~l~----s-~v~l~l~gtL~~s~ 92 (448)
T 3jur_A 19 REPQIPDREVNLLDFGARGDGRTDCSESFKRAIEE-LSKQGGGRLIVPEGVFLTGPIHLK----S-NIELHVKGTIKFIP 92 (448)
T ss_dssp CCCCCCSCEEEGGGGTCCCEEEEECHHHHHHHHHH-HHHHTCEEEEECSSEEEESCEECC----T-TEEEEESSEEEECC
T ss_pred cCCCCCCcEEEEEecccCCCCCeecHHHHHHHHHh-hhhcCCeEEEECCCcEEEeeeEeC----C-CcEEEEEEEEEecC
Confidence 34445677999999999999999999999999975 677789999999999999999997 7 99999999999999
Q ss_pred ccccc-CCC------------cceEEEecccceEEEc-eeeeCCC--CcccccccC------------------------
Q 043588 104 DYRVL-GQA------------DNWLSFEGVSGVSIIG-GALDAKG--SSLWACKAS------------------------ 143 (397)
Q Consensus 104 ~~~~~-~~~------------~~~i~~~~~~ni~I~G-G~idg~g--~~~w~~~~~------------------------ 143 (397)
++.+| +.. .+||.+.+++||+|.| |+|||+| +.||.....
T Consensus 93 d~~~y~p~~~~~~~G~~~~~~~~lI~~~~~~ni~ItG~GtIDG~G~~~~ww~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 172 (448)
T 3jur_A 93 DPERYLPVVLTRFEGIELYNYSPLVYALDCENVAITGSGVLDGSADNEHWWPWKGKKDFGWKEGLPNQQEDVKKLKEMAE 172 (448)
T ss_dssp CGGGGCSCEEEEETTEEEEESCCSEEEESCEEEEEESSCEEECCCBTTBBGGGGCCGGGTCCTTSCCSHHHHHHHHHHHH
T ss_pred CHHHhCcccccccccccccCccceEEEeCcEeeEEEEeEEEECCCCchhhhhhcccccccccccccccccchhhhhhhhc
Confidence 99888 421 3589999999999999 9999999 889974321
Q ss_pred ----------CCCCCCCceeEEEEccCCeEEEeeEEecCcceEEEEeceecEEEEeEEEECCCCCCCCCceeeecceeEE
Q 043588 144 ----------GANCPDGATTLRFTNSNNIRINGLLSLNSQMFHIVINGCKDVHIEGVTVIAPGNSPNTDGIHVQLSTNVK 213 (397)
Q Consensus 144 ----------~~~~~~~~~~i~~~~~~nv~i~~v~i~~~~~~~i~~~~~~nv~i~n~~i~~~~~~~~~DGi~~~~s~nv~ 213 (397)
+.....||++|.|.+|+|++|+|++++++|.|++++..|+|++|++++|.++ ++|+|||++.+|+||+
T Consensus 173 ~~~p~~~~~~~~~~~~RP~~i~~~~~~nv~i~giti~nsp~~~i~~~~~~nv~i~~v~I~~~--~~NtDGidi~~s~nV~ 250 (448)
T 3jur_A 173 RGTPVEERVFGKGHYLRPSFVQFYRCRNVLVEGVKIINSPMWCIHPVLSENVIIRNIEISST--GPNNDGIDPESCKYML 250 (448)
T ss_dssp HTCCGGGCBCSTTCCCCCCSEEEESCEEEEEESCEEESCSSCSEEEESCEEEEEESCEEEEC--STTCCSBCCBSCEEEE
T ss_pred ccCcchhhhccccccCCceEEEEEcccceEEEeeEEEeCCCceEeeeccCCEEEEeEEEeec--cCCCccccccCCcCEE
Confidence 0123578999999999999999999999999999999999999999999986 5799999999999999
Q ss_pred EEecEEecCCceEEeCCC-----------CeeEEEEeeEE--ecCc-eeEEeeecccCCcCCEEEEEEEeeEEeCCcceE
Q 043588 214 ITNCTIKTGDDCIPIGPG-----------TKNLWIERVTC--GPGH-GISIGSLAKDLIEEGVQNVTVFKTVFTGTTNGF 279 (397)
Q Consensus 214 I~n~~i~~~dD~i~i~~~-----------s~nv~i~n~~~--~~~~-gi~igs~~~~~~~~~v~nI~i~n~~~~~~~~gi 279 (397)
|+||+|.++||||+++++ ++||+|+||+| ..+| |++|||+ ..+.++||+|+||+|.++.+|+
T Consensus 251 I~n~~i~~gDDcIaiksg~~~dg~~~~~ps~nI~I~n~~~~~~~gh~gisiGS~----~~~~v~nV~v~n~~~~~t~~Gi 326 (448)
T 3jur_A 251 IEKCRFDTGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVISQASHGGLVIGSE----MSGGVRNVVARNNVYMNVERAL 326 (448)
T ss_dssp EESCEEEESSEEEEEBCCCHHHHHHHCCCEEEEEEESCEEECSSCSEEEEECSS----CTTCEEEEEEESCEEESCSEEE
T ss_pred EEeeEEEeCCCcEEeccCccccccccCCCceeEEEEEeEEecCCCcceEEECCc----ccCcEEEEEEEEEEEecccceE
Confidence 999999999999999997 89999999999 5566 7999998 3578999999999999999999
Q ss_pred EEEeecCCCCceEEceEEEEEEEecCcccE-EEeeecCCCCCCCCCCccceEEEeEEEEeEEEeeCCCceEEEeecCCCc
Q 043588 280 RIKSWARPSNGFVQGVSFIDAIMRNVQFPI-VIDQNYCPHNLNCPGQVSGVKINDITYQDIRGTSATPIAIKFDCSTKYP 358 (397)
Q Consensus 280 ~i~~~~~~~~g~i~ni~~~ni~~~~~~~~i-~i~~~~~~~~~~~~~~~~~~~i~nI~f~ni~~~~~~~~~~~i~~~~~~~ 358 (397)
+||++.+ ++|.++||+|+|++|.++.+++ .|++.|+.. + ....+.|+||+|+||+++. ...++.+.|.++.|
T Consensus 327 rIKt~~g-~gG~v~nI~f~ni~m~~v~~~~i~I~~~Y~~~---~--~~~~~~i~nI~~~NI~~t~-~~~~i~i~g~~~~p 399 (448)
T 3jur_A 327 RLKTNSR-RGGYMENIFFIDNVAVNVSEEVIRINLRYDNE---E--GEYLPVVRSVFVKNLKATG-GKYAVRIEGLENDY 399 (448)
T ss_dssp EEECCTT-TCSEEEEEEEESCEEEEESSEEEEEESCGGGC---C--CSCCCEEEEEEEESCEEEE-CSEEEEEECBTTBC
T ss_pred EEEEEcC-CCceEeeEEEEEEEEECCccccEEEEeeccCC---C--CCCCceEEEEEEEeEEEEe-cceEEEEEeCCCCC
Confidence 9999977 7799999999999999999988 999998753 1 1234689999999999988 56789999999999
Q ss_pred eecEEEEeEEEEeCCCccceeeec
Q 043588 359 CQGIKLQNINLRHLKQVAQSSCNN 382 (397)
Q Consensus 359 i~ni~~~ni~i~~~~~~~~~~c~n 382 (397)
|+||+|+||+++.... ...|.+
T Consensus 400 ~~~I~~~nv~i~~~~~--~~~~~~ 421 (448)
T 3jur_A 400 VKDILISDTIIEGAKI--SVLLEF 421 (448)
T ss_dssp EEEEEEEEEEEESCSE--EEEEEE
T ss_pred EeeEEEEEEEEEcccc--ceeEec
Confidence 9999999999995432 355665
No 2
>1rmg_A Rgase A, rhamnogalacturonase A; hydrolase, inverting, parallel beta-helix, glycosidase; HET: NAG BMA MAN GLC; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3
Probab=100.00 E-value=1.4e-59 Score=462.46 Aligned_cols=331 Identities=25% Similarity=0.445 Sum_probs=288.3
Q ss_pred CceeEEeeccCccCCCCcchHHHHHHHHHHhhccCCCcEEEEcCceEEeec-eeeeccCCCcceEEEEccEEEeeccccc
Q 043588 29 TTTTYNVLSFGAKGNGVTDSTQAFAKAWDAACTSTESATINVPKGRYLLGS-VAFKGDCKSSDITFRIDGTLVAPADYRV 107 (397)
Q Consensus 29 ~~~~~~v~d~GA~~dg~tddt~aiq~Ai~~a~~~~~g~~v~ip~G~Y~~~~-~~l~~~~~s~~~~l~~~G~l~~~~~~~~ 107 (397)
+...++|+||||++||.+|||+|||+||+ +|+ +|++|+||+|+|++++ +.|++. + +++|+++|+++...+..
T Consensus 17 ~~~~~~V~~~GA~~dg~tddT~Aiq~Ai~-ac~--~g~~V~vP~G~Yli~~~l~l~g~--s-~v~l~l~G~~l~~~~~~- 89 (422)
T 1rmg_A 17 ATKTCNILSYGAVADNSTDVGPAITSAWA-ACK--SGGLVYIPSGNYALNTWVTLTGG--S-ATAIQLDGIIYRTGTAS- 89 (422)
T ss_dssp HHCEEEGGGGTCCCSSSSBCHHHHHHHHH-HHT--BTCEEEECSSEEEECSCEEEESC--E-EEEEEECSEEEECCCCS-
T ss_pred CCcEEEeeeccccCCCCcccHHHHHHHHH-HCC--CCCEEEECCCeEEeCCceeecCC--C-eEEEEEcCcEEcccCCC-
Confidence 35689999999999999999999999998 565 4899999999999986 999975 6 99999999887754321
Q ss_pred cCCCcceE---EEecccceEEEc-eeeeCCCCcccccccCCCCCCCCceeEEEEccCCeEEEeeEEecCcceEEEEecee
Q 043588 108 LGQADNWL---SFEGVSGVSIIG-GALDAKGSSLWACKASGANCPDGATTLRFTNSNNIRINGLLSLNSQMFHIVINGCK 183 (397)
Q Consensus 108 ~~~~~~~i---~~~~~~ni~I~G-G~idg~g~~~w~~~~~~~~~~~~~~~i~~~~~~nv~i~~v~i~~~~~~~i~~~~~~ 183 (397)
+.|+ ...+++++.|.| |+|||+|+.||... ..||++|++.+|+|++|+|+++++++.|++++..|+
T Consensus 90 ----~~~~~~~~~~~~~~i~i~G~G~IdG~G~~~w~~~------~~rp~~i~~~~~~nv~I~~iti~nsp~~~i~i~~~~ 159 (422)
T 1rmg_A 90 ----GNMIAVTDTTDFELFSSTSKGAVQGFGYVYHAEG------TYGARILRLTDVTHFSVHDIILVDAPAFHFTMDTCS 159 (422)
T ss_dssp ----SEEEEEEEEEEEEEECSSSCCEEECCTHHHHTTT------CCCCEEEEEEEEEEEEEEEEEEECCSSCSEEEEEEE
T ss_pred ----CceEEEEecCceeEEeeccCEEEECCcchhhcCC------CCCceEEEEcccceEEEECeEEECCCceEEEEeCcC
Confidence 2333 445566667789 99999999999531 238999999999999999999999999999999999
Q ss_pred cEEEEeEEEECCCCCCCCCceeeecceeEEEEecEEecCCceEEeCCCCeeEEEEeeEEecCceeEEeeecccCCcCCEE
Q 043588 184 DVHIEGVTVIAPGNSPNTDGIHVQLSTNVKITNCTIKTGDDCIPIGPGTKNLWIERVTCGPGHGISIGSLAKDLIEEGVQ 263 (397)
Q Consensus 184 nv~i~n~~i~~~~~~~~~DGi~~~~s~nv~I~n~~i~~~dD~i~i~~~s~nv~i~n~~~~~~~gi~igs~~~~~~~~~v~ 263 (397)
|++|+|++|.+ .+.+++|||++.+ +||+|+||+|.++||||+++++++||+|+||+|..+||++|||++.+ +.++
T Consensus 160 nv~I~n~~I~~-~d~~ntDGidi~~-~nV~I~n~~i~~gDD~Iai~s~~~nI~I~n~~~~~~~GisIGS~g~~---~~v~ 234 (422)
T 1rmg_A 160 DGEVYNMAIRG-GNEGGLDGIDVWG-SNIWVHDVEVTNKDECVTVKSPANNILVESIYCNWSGGCAMGSLGAD---TDVT 234 (422)
T ss_dssp EEEEEEEEEEC-CSSTTCCSEEEEE-EEEEEEEEEEESSSEEEEEEEEEEEEEEEEEEEESSSEEEEEEECTT---EEEE
T ss_pred CEEEEeEEEEC-CCCCCCccEeecC-CeEEEEeeEEeCCCCeEEeCCCCcCEEEEeEEEcCCcceeecccCCC---CcEE
Confidence 99999999999 4557999999999 99999999999999999999999999999999999999999998643 4799
Q ss_pred EEEEEeeEEeCCcceEEEEeecCCCCceEEceEEEEEEEecCcccEEEeeecCCCCCCCCCCccceEEEeEEEEeEEEee
Q 043588 264 NVTVFKTVFTGTTNGFRIKSWARPSNGFVQGVSFIDAIMRNVQFPIVIDQNYCPHNLNCPGQVSGVKINDITYQDIRGTS 343 (397)
Q Consensus 264 nI~i~n~~~~~~~~gi~i~~~~~~~~g~i~ni~~~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~i~nI~f~ni~~~~ 343 (397)
||+|+||+|.++.+|++||++.+ .|.++||+|+|++|+++++++.|.+.|+... ......+.|+||+|+||+++.
T Consensus 235 nV~v~n~~~~~~~~Gi~Ikt~~g--~G~v~nI~~~NI~~~~v~~~i~i~~~y~~~~---~~~~~~~~i~nI~~~nI~gt~ 309 (422)
T 1rmg_A 235 DIVYRNVYTWSSNQMYMIKSNGG--SGTVSNVLLENFIGHGNAYSLDIDGYWSSMT---AVAGDGVQLNNITVKNWKGTE 309 (422)
T ss_dssp EEEEEEEEEESSSCSEEEEEBBC--CEEEEEEEEEEEEEEEESCSEEEETBCTTSC---CBSSSCCEEEEEEEEEEEEEE
T ss_pred EEEEEeEEEeccceEEEEEecCC--CcEEEEEEEEeEEEECccccEEEEeeccCCC---cccCCCceEEEEEEEeEEEEe
Confidence 99999999999999999999643 5899999999999999999999999886521 123456799999999999997
Q ss_pred CC---CceEEEeecCCCceecEEEEeEEEEeCC-Cccceeeeccccc
Q 043588 344 AT---PIAIKFDCSTKYPCQGIKLQNINLRHLK-QVAQSSCNNVIGK 386 (397)
Q Consensus 344 ~~---~~~~~i~~~~~~~i~ni~~~ni~i~~~~-~~~~~~c~nv~~~ 386 (397)
.. ..++.+.|.++.+|+||+|+||+++..+ +...+.|+|+++.
T Consensus 310 ~~g~~~~~i~i~~~~~~~~~ni~l~nv~i~~~~g~~~~~~C~n~~g~ 356 (422)
T 1rmg_A 310 ANGATRPPIRVVCSDTAPCTDLTLEDIAIWTESGSSELYLCRSAYGS 356 (422)
T ss_dssp SCTTTSCSEEEECBTTBCEEEEEEEEEEEEESSSSCEEEEEESEEEE
T ss_pred cccccceeEEEEeCCCCcEeeEEEEeEEEEcCCCCccceEEECCCcc
Confidence 53 4578999999999999999999999876 4567999999975
No 3
>1bhe_A PEHA, polygalacturonase; family 28 glycosyl hydrolase, hydrolyses polygalacturonic acid, glycosidase; 1.90A {Pectobacterium carotovorum subsp} SCOP: b.80.1.3
Probab=100.00 E-value=7.5e-58 Score=445.60 Aligned_cols=327 Identities=28% Similarity=0.430 Sum_probs=287.7
Q ss_pred ceeEEeeccCccCCCCcchHHHHHHHHHHhhccCCCcEEEEcC---ceEEeeceeeeccCCCcceEEEEcc--EEEeecc
Q 043588 30 TTTYNVLSFGAKGNGVTDSTQAFAKAWDAACTSTESATINVPK---GRYLLGSVAFKGDCKSSDITFRIDG--TLVAPAD 104 (397)
Q Consensus 30 ~~~~~v~d~GA~~dg~tddt~aiq~Ai~~a~~~~~g~~v~ip~---G~Y~~~~~~l~~~~~s~~~~l~~~G--~l~~~~~ 104 (397)
+.+++|++|| .+|||+|||+||+ +|++ |++|+||| |+|+++++.|+ | +++|++++ +|+++.+
T Consensus 12 p~~~~v~~~G-----~~~dT~aiq~Ai~-ac~~--Gg~v~~~~~~~g~yl~g~i~l~----s-~vtL~l~~Ga~L~~s~~ 78 (376)
T 1bhe_A 12 PSSCTTLKAD-----SSTATSTIQKALN-NCDQ--GKAVRLSAGSTSVFLSGPLSLP----S-GVSLLIDKGVTLRAVNN 78 (376)
T ss_dssp CCEEEEEECC-----SSBCHHHHHHHHT-TCCT--TCEEEEECSSSSEEEESCEECC----T-TCEEEECTTCEEEECSC
T ss_pred CCeEEECCCC-----CCccHHHHHHHHH-Hhcc--CCcEEEECCCCceEEEeEEEEC----C-CCEEEECCCeEEEeCCC
Confidence 4479999986 4799999999997 5664 67777765 79999999998 7 99999995 9999988
Q ss_pred ccccCCC--------------cceEEEecccceEEEc-eeeeCCC--------Cccccccc---CCCCCCCCceeEEEEc
Q 043588 105 YRVLGQA--------------DNWLSFEGVSGVSIIG-GALDAKG--------SSLWACKA---SGANCPDGATTLRFTN 158 (397)
Q Consensus 105 ~~~~~~~--------------~~~i~~~~~~ni~I~G-G~idg~g--------~~~w~~~~---~~~~~~~~~~~i~~~~ 158 (397)
+..|+.. .+|+.+.+++||+|.| |+|||+| +.||.... .......||++|.|.+
T Consensus 79 ~~~y~~~~~~~g~~~~~g~~~~~~I~~~~~~ni~I~G~G~IdG~G~~~~~~~~~~ww~~~~~~~~~~~~~~rp~~i~~~~ 158 (376)
T 1bhe_A 79 AKSFENAPSSCGVVDKNGKGCDAFITAVSTTNSGIYGPGTIDGQGGVKLQDKKVSWWELAADAKVKKLKQNTPRLIQINK 158 (376)
T ss_dssp SGGGBSSTTCSSCEESCSCCBCCSEEEESCBSCEEECSSEEECCTTSCCSSSSSCTTHHHHHHHHHTCEECCCCSEEEES
T ss_pred HHHCcCCCccccccccCCCCcccEEEEECCEeEEEEeCEEEECCCCcccCCCccccccccccccccCccCCCCeEEEEEc
Confidence 8888642 3689999999999999 9999998 57886421 0012245899999999
Q ss_pred cCCeEEEeeEEecCcceEEEEeceecEEEEeEEEECCCCCCCCCceeeecceeEEEEecEEecCCceEEeCC-----CCe
Q 043588 159 SNNIRINGLLSLNSQMFHIVINGCKDVHIEGVTVIAPGNSPNTDGIHVQLSTNVKITNCTIKTGDDCIPIGP-----GTK 233 (397)
Q Consensus 159 ~~nv~i~~v~i~~~~~~~i~~~~~~nv~i~n~~i~~~~~~~~~DGi~~~~s~nv~I~n~~i~~~dD~i~i~~-----~s~ 233 (397)
|+|++|++++++++|.|++++..|++++|+|++|.++.+++|+|||++.+|+||+|+||+|.++||||++++ +++
T Consensus 159 ~~nv~I~~iti~nsp~~~i~~~~~~~v~i~~v~I~~~~~~~NtDGid~~~s~nV~I~n~~i~~gDDcIaiks~~~~~~s~ 238 (376)
T 1bhe_A 159 SKNFTLYNVSLINSPNFHVVFSDGDGFTAWKTTIKTPSTARNTDGIDPMSSKNITIAYSNIATGDDNVAIKAYKGRAETR 238 (376)
T ss_dssp CEEEEEEEEEEECCSSCSEEEESCEEEEEEEEEEECCTTCSSCCSEEEESCEEEEEESCEEECSSCSEEEEECTTSCCEE
T ss_pred ceEEEEEeEEEECCCcEEEEEeCCCcEEEEeEEEECCCCCCCCceEeecCCceEEEEeCEEecCCCeEEEcccCCCCCce
Confidence 999999999999999999999999999999999999888889999999999999999999999999999995 699
Q ss_pred eEEEEeeEEecCceeEEeeecccCCcCCEEEEEEEeeEEeCCcceEEEEeecCCCCceEEceEEEEEEEecCcccEEEee
Q 043588 234 NLWIERVTCGPGHGISIGSLAKDLIEEGVQNVTVFKTVFTGTTNGFRIKSWARPSNGFVQGVSFIDAIMRNVQFPIVIDQ 313 (397)
Q Consensus 234 nv~i~n~~~~~~~gi~igs~~~~~~~~~v~nI~i~n~~~~~~~~gi~i~~~~~~~~g~i~ni~~~ni~~~~~~~~i~i~~ 313 (397)
||+|+||+|.++||++|||+. . .++||+|+||+|.++.+|++||+|++ ++|.++||+|+|++|+++.+||.|++
T Consensus 239 nI~I~n~~~~~ghGisiGSe~----~-~v~nV~v~n~~~~~t~~GirIKt~~g-~~G~v~ni~f~ni~~~~v~~~i~i~~ 312 (376)
T 1bhe_A 239 NISILHNDFGTGHGMSIGSET----M-GVYNVTVDDLKMNGTTNGLRIKSDKS-AAGVVNGVRYSNVVMKNVAKPIVIDT 312 (376)
T ss_dssp EEEEEEEEECSSSCEEEEEEE----S-SEEEEEEEEEEEESCSEEEEEECCTT-TCCEEEEEEEEEEEEESCSEEEEEET
T ss_pred EEEEEeeEEEccccEEeccCC----c-cEeeEEEEeeEEeCCCcEEEEEEecC-CCceEeeEEEEeEEEeCCCceEEEEe
Confidence 999999999999999999983 2 89999999999999999999999987 88999999999999999999999999
Q ss_pred ecCCCCCCCCCCccceEEEeEEEEeEEEeeCCCceEEEeecCCCceecEEEEeEEEEeCCCccceeeecccc
Q 043588 314 NYCPHNLNCPGQVSGVKINDITYQDIRGTSATPIAIKFDCSTKYPCQGIKLQNINLRHLKQVAQSSCNNVIG 385 (397)
Q Consensus 314 ~~~~~~~~~~~~~~~~~i~nI~f~ni~~~~~~~~~~~i~~~~~~~i~ni~~~ni~i~~~~~~~~~~c~nv~~ 385 (397)
.|++.. ....+.|+||+|+||+++... ++.+.|.++.||++|+|+||++... .++.|+|+..
T Consensus 313 ~y~~~~-----~~~~~~i~ni~~~ni~gt~~~--~~~l~g~~~~~~~~I~l~nv~l~~~---~~~~~~~~~~ 374 (376)
T 1bhe_A 313 VYEKKE-----GSNVPDWSDITFKDVTSETKG--VVVLNGENAKKPIEVTMKNVKLTSD---STWQIKNVNV 374 (376)
T ss_dssp TSSCCC-----CCCCCEEEEEEEEEEEECSCC--EEEEECTTCSSCEEEEEEEEECCTT---CEEEEESEEE
T ss_pred eccCCC-----CCcCcEEEEEEEEEEEEEecc--eEEEEeCCCCCeeeEEEEeEEEecC---CCceEEEEEe
Confidence 987631 223468999999999999764 6889999999999999999999854 4599999864
No 4
>1czf_A Polygalacturonase II; beta helix, hydrolase; HET: NAG; 1.68A {Aspergillus niger} SCOP: b.80.1.3
Probab=100.00 E-value=2.6e-57 Score=437.43 Aligned_cols=321 Identities=21% Similarity=0.407 Sum_probs=278.3
Q ss_pred eeEEeeccCccCCCCcchHHHHHHHHHHhhccCCCcEEEEcCceEEeece-eeeccCCCcceEEEEccEEEeeccccccC
Q 043588 31 TTYNVLSFGAKGNGVTDSTQAFAKAWDAACTSTESATINVPKGRYLLGSV-AFKGDCKSSDITFRIDGTLVAPADYRVLG 109 (397)
Q Consensus 31 ~~~~v~d~GA~~dg~tddt~aiq~Ai~~a~~~~~g~~v~ip~G~Y~~~~~-~l~~~~~s~~~~l~~~G~l~~~~~~~~~~ 109 (397)
.+++|++ ++|||+|++ +|++.++++|+||+|+|+. + .|+ + +++|+++|.+.+ ++..|.
T Consensus 28 ~~Ctv~~-----------~~aiq~ai~-~c~~~~g~~v~vP~G~~l~--l~~l~----~-~~~l~~~g~~~~--~~~~w~ 86 (362)
T 1czf_A 28 DSCTFTT-----------AAAAKAGKA-KCSTITLNNIEVPAGTTLD--LTGLT----S-GTKVIFEGTTTF--QYEEWA 86 (362)
T ss_dssp CEEEESS-----------HHHHHHHGG-GCSEEEEESCEECTTCCEE--ECSCC----T-TCEEEEESEEEE--CCCCSC
T ss_pred CEEEECC-----------HHHHHHHHH-HhhccCCCEEEECCCEEEE--eeccC----C-CeEEEEeCcEEe--ccccCC
Confidence 5688755 789999996 5787788999999999973 3 444 6 899999998876 345665
Q ss_pred CCcceEEEecccceEEEc---eeeeCCCCcccccccCCCCCCCCceeEEEEccCCeEEEeeEEecCcceEEEEeceecEE
Q 043588 110 QADNWLSFEGVSGVSIIG---GALDAKGSSLWACKASGANCPDGATTLRFTNSNNIRINGLLSLNSQMFHIVINGCKDVH 186 (397)
Q Consensus 110 ~~~~~i~~~~~~ni~I~G---G~idg~g~~~w~~~~~~~~~~~~~~~i~~~~~~nv~i~~v~i~~~~~~~i~~~~~~nv~ 186 (397)
++|+.+. .+||+|.| |+|||+|+.||..... ....||+++++.+|+|++|+|++++++|.|++++. |+|++
T Consensus 87 --g~~i~~~-~~nv~I~G~~~g~IdG~G~~~w~~~~~--~~~~rP~~i~~~~~~nv~i~~iti~nsp~~~i~i~-~~nv~ 160 (362)
T 1czf_A 87 --GPLISMS-GEHITVTGASGHLINCDGARWWDGKGT--SGKKKPKFFYAHGLDSSSITGLNIKNTPLMAFSVQ-ANDIT 160 (362)
T ss_dssp --CCSEEEE-EESCEEEECTTCEEECCGGGTCCSCTT--SSSCCCCCEEEEEEETEEEESCEEECCSSCCEEEE-CSSEE
T ss_pred --CcEEEEe-CccEEEEcCCCcEEECCCchhhcccCC--CCCCCCeEEEEeecccEEEEEEEEecCCccEEEEe-eCCEE
Confidence 4688886 59999999 8999999999985432 35678999999999999999999999999999999 99999
Q ss_pred EEeEEEECCC-C---CCCCCceeeecceeEEEEecEEecCCceEEeCCCCeeEEEEeeEEecCceeEEeeecccCCcCCE
Q 043588 187 IEGVTVIAPG-N---SPNTDGIHVQLSTNVKITNCTIKTGDDCIPIGPGTKNLWIERVTCGPGHGISIGSLAKDLIEEGV 262 (397)
Q Consensus 187 i~n~~i~~~~-~---~~~~DGi~~~~s~nv~I~n~~i~~~dD~i~i~~~s~nv~i~n~~~~~~~gi~igs~~~~~~~~~v 262 (397)
|+|++|.++. + ++|+|||++.+|+||+|+||++.++||||++++ .+||+|+||+|.++||++|||+|.+ +.+.+
T Consensus 161 i~~~~I~~~~~d~~~~~NtDGidi~~s~nV~I~n~~i~~gDDcIaiks-g~nI~i~n~~~~~ghGisiGS~G~~-~~~~v 238 (362)
T 1czf_A 161 FTDVTINNADGDTQGGHNTDAFDVGNSVGVNIIKPWVHNQDDCLAVNS-GENIWFTGGTCIGGHGLSIGSVGDR-SNNVV 238 (362)
T ss_dssp EESCEEECGGGGTTTCCSCCSEEECSCEEEEEESCEEECSSCSEEESS-EEEEEEESCEEESSCCEEEEEECSS-SCCEE
T ss_pred EEEEEEECCccccccCCCCCceeecCcceEEEEeeEEecCCCEEEEeC-CeEEEEEEEEEeCCceeEEeecccc-CCCCE
Confidence 9999999964 3 689999999999999999999999999999999 5999999999999999999998765 45789
Q ss_pred EEEEEEeeEEeCCcceEEEEeecCCCCceEEceEEEEEEEecCc-ccEEEeeecCCCCCCCCCCccceEEEeEEEEeEEE
Q 043588 263 QNVTVFKTVFTGTTNGFRIKSWARPSNGFVQGVSFIDAIMRNVQ-FPIVIDQNYCPHNLNCPGQVSGVKINDITYQDIRG 341 (397)
Q Consensus 263 ~nI~i~n~~~~~~~~gi~i~~~~~~~~g~i~ni~~~ni~~~~~~-~~i~i~~~~~~~~~~~~~~~~~~~i~nI~f~ni~~ 341 (397)
+||+|+||+|.++.+|++||+|++ ++|.++||+|+|++|+++. +||.|++.|++.. .+......++|+||+|+||++
T Consensus 239 ~nV~v~n~~~~~t~~GirIKt~~g-~~G~v~nI~~~ni~~~~v~~~~i~I~~~Y~~~~-~~~~p~~~~~i~nI~~~ni~g 316 (362)
T 1czf_A 239 KNVTIEHSTVSNSENAVRIKTISG-ATGSVSEITYSNIVMSGISDYGVVIQQDYEDGK-PTGKPTNGVTIQDVKLESVTG 316 (362)
T ss_dssp EEEEEEEEEEEEEEEEEEEEEETT-CCEEEEEEEEEEEEEEEEEEEEEEEEEEEETTE-ECSCCCSSEEEEEEEEEEEEE
T ss_pred EEEEEEeeEEECCceEEEEEEeCC-CCceEeeEEEEeEEEECcccccEEEEEecCCCC-CCCCCCCCceEEEEEEEEEEE
Confidence 999999999999999999999987 7899999999999999987 7999999987631 111122457999999999999
Q ss_pred eeCC-CceEEEeecCCCceecEEEEeEEEEeCCCccceeeecccc
Q 043588 342 TSAT-PIAIKFDCSTKYPCQGIKLQNINLRHLKQVAQSSCNNVIG 385 (397)
Q Consensus 342 ~~~~-~~~~~i~~~~~~~i~ni~~~ni~i~~~~~~~~~~c~nv~~ 385 (397)
+... ..++.+.|+ +.||+||+|+||+++. +.....|.|++.
T Consensus 317 t~~~~~~~i~i~c~-~~~c~ni~~~nv~i~~--~~~~~~C~n~~~ 358 (362)
T 1czf_A 317 SVDSGATEIYLLCG-SGSCSDWTWDDVKVTG--GKKSTACKNFPS 358 (362)
T ss_dssp EECTTSEEEEEECC-TTTEEEEEEEEEEEES--SBCCSCCBSCCT
T ss_pred EecCCceEEEEEeC-CCcCcCEEEEeEEEEc--CCCcccCcCCCC
Confidence 9875 568999998 7999999999999984 345678999985
No 5
>2uvf_A Exopolygalacturonase; GH28, pectin, cell WALL, hydrolase, periplasm, beta-helix, glycosidase, EXO-activity; HET: AD0; 2.1A {Yersinia enterocolitica} PDB: 2uve_A*
Probab=100.00 E-value=1.3e-55 Score=452.71 Aligned_cols=353 Identities=23% Similarity=0.323 Sum_probs=283.4
Q ss_pred CceeEEeeccCccCCCCcchHHHHHHHHHHhhccCCCcEEEEcCceEEeeceeeeccCCCcceEEEEc--cEEEeecccc
Q 043588 29 TTTTYNVLSFGAKGNGVTDSTQAFAKAWDAACTSTESATINVPKGRYLLGSVAFKGDCKSSDITFRID--GTLVAPADYR 106 (397)
Q Consensus 29 ~~~~~~v~d~GA~~dg~tddt~aiq~Ai~~a~~~~~g~~v~ip~G~Y~~~~~~l~~~~~s~~~~l~~~--G~l~~~~~~~ 106 (397)
.+..++|++|||+|||.+|||+|||+||+ +|+. |++|+||+|+|+++++.|+ | +++|+++ |+|+++.+..
T Consensus 153 ~~~~~~v~~~Ga~~dg~~ddt~aiq~Ai~-~c~~--g~~v~vP~G~y~~g~i~lk----s-~v~L~l~~gatL~~s~d~~ 224 (608)
T 2uvf_A 153 KPQIVNVRDFGAIDDGKTLNTKAIQQAID-SCKP--GCRVEIPAGTYKSGALWLK----S-DMTLNLQAGAILLGSENPD 224 (608)
T ss_dssp CCCEEEGGGGTCCSSSSCCCHHHHHHHHH-TCCT--TEEEEECSEEEEECCEECC----S-SEEEEECTTEEEEECSCGG
T ss_pred CCCEEecccccccCCCCccCHHHHHHHHH-hcCC--CCEEEECCCceEecceecc----C-ceEEEecCCcEEEecCCHH
Confidence 45589999999999999999999999997 5654 8999999999999999997 7 9999995 6999998888
Q ss_pred ccCCC------------cceEEEec--------ccceEEEc-eeeeCCCCcccccc----cCCC----------------
Q 043588 107 VLGQA------------DNWLSFEG--------VSGVSIIG-GALDAKGSSLWACK----ASGA---------------- 145 (397)
Q Consensus 107 ~~~~~------------~~~i~~~~--------~~ni~I~G-G~idg~g~~~w~~~----~~~~---------------- 145 (397)
+|+.. .++|.+.+ ++||+|.| |+|||+|..||... ..+.
T Consensus 225 ~y~~~~~~~~~~~~~~~~~lI~~~~~~~~~~g~~~ni~I~G~GtIDG~G~~~~~~~~~~~~~g~~~p~~~~~~~~~~~~~ 304 (608)
T 2uvf_A 225 DYPAGYRLYPYSTIERPASLINAIDPNNSKPGTFRNIRITGSGVIDGNGWLRAKTAEITDELGRSLPQYVASKNSKVHED 304 (608)
T ss_dssp GSCEEECSSTTCCSCEECCSEEECCSSCCCTTSEEEEEEESSCEEECCCBCEEEEEEEECTTSCEEEEECCCCTTTHHHH
T ss_pred HCcCcceeeeccccccccceEEeeccccccccceeeEEEEeeEEEcCccccccccccccccccccccccccccccccccc
Confidence 77631 24677776 69999999 99999998887421 0000
Q ss_pred ----------------C-----CCCCceeEEEEccCCeEEEeeEEecCcceEEEEeceecEEEEeEEEECCCCCCCCCce
Q 043588 146 ----------------N-----CPDGATTLRFTNSNNIRINGLLSLNSQMFHIVINGCKDVHIEGVTVIAPGNSPNTDGI 204 (397)
Q Consensus 146 ----------------~-----~~~~~~~i~~~~~~nv~i~~v~i~~~~~~~i~~~~~~nv~i~n~~i~~~~~~~~~DGi 204 (397)
. ...||++|.|.+|+|++|+|+++++++.|++++..|+|++|+|++|.. .+++|+|||
T Consensus 305 ~~~~~~~~~~~~~~g~~~~~~~~~~rP~~i~~~~~~nv~I~giti~ns~~~~i~~~~~~nv~i~~v~i~~-~~~~NtDGi 383 (608)
T 2uvf_A 305 GILAKNQVEKAVSDGMDLKNAYGQRRSSLMTLRGVENVYLAGFTVRNPAFHGIMNLENHNVVANGLIHQT-YDANNGDGI 383 (608)
T ss_dssp BSHHHHHHHHHHHTTCCHHHHHHHSSCCSEEEESEEEEEEESCEEECCSSCSEEEESCEEEEEESCEEEC-TTCTTCCSE
T ss_pred ccccccccccccccccccccccccCCCeEEEEEeeeeEEEeCcEEecCCCCEEEEecCCCEEEeeEEEcC-CCCCCCCeE
Confidence 0 114899999999999999999999999999999999999999999875 456899999
Q ss_pred eeecceeEEEEecEEecCCceEEeCCC----------CeeEEEEeeEEecCce-eEEeeecccCCcCCEEEEEEEeeEEe
Q 043588 205 HVQLSTNVKITNCTIKTGDDCIPIGPG----------TKNLWIERVTCGPGHG-ISIGSLAKDLIEEGVQNVTVFKTVFT 273 (397)
Q Consensus 205 ~~~~s~nv~I~n~~i~~~dD~i~i~~~----------s~nv~i~n~~~~~~~g-i~igs~~~~~~~~~v~nI~i~n~~~~ 273 (397)
++.+|+||+|+||+|.++||||+++++ ++||+|+||+|.++|| +.|||+ ..+.++||+|+||+|.
T Consensus 384 di~~s~nV~I~n~~i~~gDD~Iaiksg~~~~g~~~~~s~nI~I~n~~~~~ghg~~~iGS~----~~~~v~nI~v~n~~~~ 459 (608)
T 2uvf_A 384 EFGNSQNVMVFNNFFDTGDDCINFAAGTGEKAQEQEPMKGAWLFNNYFRMGHGAIVTGSH----TGAWIEDILAENNVMY 459 (608)
T ss_dssp EEESCEEEEEESCEEECSSCSEEEECCCSGGGGGSCCEEEEEEESCEECSSSCSEEEESC----CTTCEEEEEEESCEEE
T ss_pred EecCCceEEEEeeEEecCCceEEecCCcCccccccccccCEEEEeEEEeCCCCeEEEccc----CCCCEEEEEEEeEEEE
Confidence 999999999999999999999999875 7999999999999998 468986 5678999999999999
Q ss_pred CCcceEEEEeecCCCCceEEceEEEEEEEecC-cccEEEeeecCCCCCCC--CCCccceEEEeEEEEeEEEeeCCC--ce
Q 043588 274 GTTNGFRIKSWARPSNGFVQGVSFIDAIMRNV-QFPIVIDQNYCPHNLNC--PGQVSGVKINDITYQDIRGTSATP--IA 348 (397)
Q Consensus 274 ~~~~gi~i~~~~~~~~g~i~ni~~~ni~~~~~-~~~i~i~~~~~~~~~~~--~~~~~~~~i~nI~f~ni~~~~~~~--~~ 348 (397)
++.+|++||++.+ ++|.++||+|+|++|+++ .+||.|++.|+...... ......+.++||+|+||+...... .+
T Consensus 460 ~t~~GirIKt~~g-~gG~v~nI~~~ni~m~~v~~~~i~I~~~y~~~~~~~~~~~~~~~~~~~~V~i~nI~~~n~~gt~~~ 538 (608)
T 2uvf_A 460 LTDIGLRAKSTST-IGGGARNVTFRNNAMRDLAKQVMVMTLDYADSNANIDYPPAKIPAQFYDFTLKNVTVDNSTGKNPS 538 (608)
T ss_dssp SCSEEEEEEEETT-TCCEEEEEEEEEEEEEEESSEEEEEEEECCCCSCCCSSCCCSSCCEEEEEEEEEEEEEEECSSSCS
T ss_pred CCCceEEEeeecC-CCceEECcEEEeeEEEccccccEEEEeccCCCCcccccCCcCCCCccccEEEEeEEEEeeeceEEe
Confidence 9999999999977 779999999999999999 59999999998643200 000112345666666665544321 23
Q ss_pred EEEe--ecCCCceecEEEEeEEEEeCC---------------------CccceeeecccccccCeecCCC
Q 043588 349 IKFD--CSTKYPCQGIKLQNINLRHLK---------------------QVAQSSCNNVIGKALGLVQPNS 395 (397)
Q Consensus 349 ~~i~--~~~~~~i~ni~~~ni~i~~~~---------------------~~~~~~c~nv~~~~~~~~~~~~ 395 (397)
+.+. |.+..+|+||+|+||+++... +..++.|.+|.+..+.-+.|.|
T Consensus 539 i~i~g~~~~~~p~~ni~~~nv~i~~~~~~~i~~~~~~~~~nv~i~~~~~~~~~~~~~v~~~~~~~v~~~p 608 (608)
T 2uvf_A 539 IEIKGDTANKAWHRLVHVNNVQLNNVTPTAISDLRDSEFNKVTFTELRGDTPWHFSEVKNVKVDGKPVAP 608 (608)
T ss_dssp EEEECBGGGTBCEEEEEEEEEEEESCCCCEEESEESCEEEEEEEESCSSSCSCCEESCBSCCBTTCCC--
T ss_pred EEEEEEcCCCCccccEEEEeEEEEccCceeEEeccCceEEeEEEeCCCCCccEEEEeeeceEEcceEeCC
Confidence 4444 455668888888888776432 1135788888887774466655
No 6
>2iq7_A Endopolygalacturonase; parallel beta helix, hydrolase; HET: NAG MAN PG4; 1.94A {Colletotrichum lupini}
Probab=100.00 E-value=4.1e-55 Score=419.80 Aligned_cols=319 Identities=27% Similarity=0.426 Sum_probs=275.6
Q ss_pred chHHHHHHHHHHhhccCCCcEEEEcCceEEeece-eeeccCCCcceEEEEccEEEeeccccccCCCcceEEEecccceEE
Q 043588 47 DSTQAFAKAWDAACTSTESATINVPKGRYLLGSV-AFKGDCKSSDITFRIDGTLVAPADYRVLGQADNWLSFEGVSGVSI 125 (397)
Q Consensus 47 ddt~aiq~Ai~~a~~~~~g~~v~ip~G~Y~~~~~-~l~~~~~s~~~~l~~~G~l~~~~~~~~~~~~~~~i~~~~~~ni~I 125 (397)
.||+|||+||+ +|++.++++|+||+|+|+. + .|+ + +++|+++|.+.+ ++..|. ++|+.+.+ +||+|
T Consensus 6 ~dt~aiq~ai~-~c~~~~g~~v~vP~G~~~~--l~~l~----~-~~~l~~~g~~~~--~~~~w~--g~~i~~~~-~nv~I 72 (339)
T 2iq7_A 6 TDAAAAIKGKA-SCTSIILNGIVVPAGTTLD--MTGLK----S-GTTVTFQGKTTF--GYKEWE--GPLISFSG-TNINI 72 (339)
T ss_dssp SCHHHHHHHGG-GCSEEEEESCEECTTCCEE--ECSCC----T-TCEEEEESEEEE--CCCCSC--CCSEEEEE-ESCEE
T ss_pred CCHHHHHHHHH-HhhccCCCeEEECCCEEEE--eeccC----C-CeEEEEeCcEEc--cccccc--CcEEEEEc-ccEEE
Confidence 57999999997 5787778999999999974 3 444 6 899999998876 345665 45888875 99999
Q ss_pred Ec---eeeeCCCCcccccccCCCCCCCCceeEEEEccCCeEEEeeEEecCcceEEEEeceecEEEEeEEEECCCC----C
Q 043588 126 IG---GALDAKGSSLWACKASGANCPDGATTLRFTNSNNIRINGLLSLNSQMFHIVINGCKDVHIEGVTVIAPGN----S 198 (397)
Q Consensus 126 ~G---G~idg~g~~~w~~~~~~~~~~~~~~~i~~~~~~nv~i~~v~i~~~~~~~i~~~~~~nv~i~n~~i~~~~~----~ 198 (397)
.| |+|||+|+.||..... .....||++|.+.+|+|++|++++++++|.|++++..|+|++|++++|.++.+ +
T Consensus 73 ~G~~gG~IdG~G~~~w~~~~~-~~~~~rp~~i~~~~~~nv~i~giti~nsp~~~i~i~~~~nv~i~~~~I~~~~~d~~~~ 151 (339)
T 2iq7_A 73 NGASGHSIDCQGSRWWDSKGS-NGGKTKPKFFYAHSLKSSNIKGLNVLNTPVQAFSINSATTLGVYDVIIDNSAGDSAGG 151 (339)
T ss_dssp EECTTCEEECCGGGTCCSCGG-GSSSCCCCCEEEEEEEEEEEECCEEECCSSCCEEEESCEEEEEESCEEECGGGGGTTC
T ss_pred EcCCCCEEECCcccccccccc-cCCCCCCeEEEEeeeCcEEEEEEEEEeCCcceEEEeccCCEEEEEEEEECCccccccC
Confidence 99 6999999999975432 12457899999999999999999999999999999999999999999998743 6
Q ss_pred CCCCceeeecceeEEEEecEEecCCceEEeCCCCeeEEEEeeEEecCceeEEeeecccCCcCCEEEEEEEeeEEeCCcce
Q 043588 199 PNTDGIHVQLSTNVKITNCTIKTGDDCIPIGPGTKNLWIERVTCGPGHGISIGSLAKDLIEEGVQNVTVFKTVFTGTTNG 278 (397)
Q Consensus 199 ~~~DGi~~~~s~nv~I~n~~i~~~dD~i~i~~~s~nv~i~n~~~~~~~gi~igs~~~~~~~~~v~nI~i~n~~~~~~~~g 278 (397)
+|+|||++.+|+||+|+||+|.++||||++++ .+||+|+||+|.++||++|||++.+ ..+.++||+|+||+|.++.+|
T Consensus 152 ~ntDGid~~~s~nV~I~n~~i~~gDDciaiks-g~nI~i~n~~~~~ghGisiGSlg~~-~~~~v~nV~v~n~~~~~~~~g 229 (339)
T 2iq7_A 152 HNTDAFDVGSSTGVYISGANVKNQDDCLAINS-GTNITFTGGTCSGGHGLSIGSVGGR-SDNTVKTVTISNSKIVNSDNG 229 (339)
T ss_dssp CSCCSEEEESCEEEEEESCEEECSSCSEEESS-EEEEEEESCEEESSCCEEEEEESSS-SCCEEEEEEEEEEEEESCSEE
T ss_pred CCCCcEEEcCcceEEEEecEEecCCCEEEEcC-CccEEEEeEEEECCceEEECcCCcc-cCCCEEEEEEEeeEEECCCcE
Confidence 89999999999999999999999999999999 5999999999999999999998765 457899999999999999999
Q ss_pred EEEEeecCCCCceEEceEEEEEEEecCcc-cEEEeeecCCCCCCCCCCccceEEEeEEEEeEEEeeCC-CceEEEeecCC
Q 043588 279 FRIKSWARPSNGFVQGVSFIDAIMRNVQF-PIVIDQNYCPHNLNCPGQVSGVKINDITYQDIRGTSAT-PIAIKFDCSTK 356 (397)
Q Consensus 279 i~i~~~~~~~~g~i~ni~~~ni~~~~~~~-~i~i~~~~~~~~~~~~~~~~~~~i~nI~f~ni~~~~~~-~~~~~i~~~~~ 356 (397)
++||+|.+ ++|.++||+|+|++|+++.. |+.|++.|++.. .+......++|+||+|+||+++... ..++.+.|+ .
T Consensus 230 irIkt~~g-~~G~v~nI~~~ni~~~~v~~~~i~i~~~y~~~~-~~~~p~~~~~i~ni~~~ni~gt~~~~~~~~~i~c~-~ 306 (339)
T 2iq7_A 230 VRIKTVSG-ATGSVSGVTYSGITLSNIAKYGIVIEQDYENGS-PTGTPTNGVPITGLTLSKITGSVASSGTNVYILCA-S 306 (339)
T ss_dssp EEEEEETT-CCCEEEEEEEEEEEEEEESSEEEEEEEEEETTE-ECSCCCSSSCEEEEEEEEEEEEECTTSEEEEEECC-T
T ss_pred EEEEEeCC-CCeEEEEEEEEeEEccCcccccEEEEeecCCCC-CCCCCCCCceEEEEEEEeEEEEeCCCCEEEEEEeC-C
Confidence 99999987 78999999999999999886 999999987631 1111224578999999999999875 568999995 8
Q ss_pred CceecEEEEeEEEEeCCCccceeeeccccc
Q 043588 357 YPCQGIKLQNINLRHLKQVAQSSCNNVIGK 386 (397)
Q Consensus 357 ~~i~ni~~~ni~i~~~~~~~~~~c~nv~~~ 386 (397)
.||+||+|+||+++. +...+.|.|++..
T Consensus 307 ~~c~ni~~~nv~i~~--~~~~~~C~n~~~~ 334 (339)
T 2iq7_A 307 GACSNWKWSGVSVTG--GKKSTKCSNIPSG 334 (339)
T ss_dssp TCEEEEEEEEEEEES--SBCCSCCBCCCTT
T ss_pred CcEecEEEEeEEEEc--CCCcccccCCCCC
Confidence 899999999999984 4456789999854
No 7
>1nhc_A Polygalacturonase I; beta-helix, hydrolase; HET: MAN NAG BMA; 1.70A {Aspergillus niger} SCOP: b.80.1.3
Probab=100.00 E-value=4.2e-55 Score=419.22 Aligned_cols=318 Identities=24% Similarity=0.410 Sum_probs=275.1
Q ss_pred cchHHHHHHHHHHhhccCCCcEEEEcCceEEeece-eeeccCCCcceEEEEccEEEeeccccccCCCcceEEEecccceE
Q 043588 46 TDSTQAFAKAWDAACTSTESATINVPKGRYLLGSV-AFKGDCKSSDITFRIDGTLVAPADYRVLGQADNWLSFEGVSGVS 124 (397)
Q Consensus 46 tddt~aiq~Ai~~a~~~~~g~~v~ip~G~Y~~~~~-~l~~~~~s~~~~l~~~G~l~~~~~~~~~~~~~~~i~~~~~~ni~ 124 (397)
..||+|||+||+ +|++.++++|+||+|+|+. + .|+ + +++|+++|++.+ ++..|. ++|+.+. .+||+
T Consensus 5 ~~~t~aiq~ai~-~c~~~gg~~v~vP~G~~~~--l~~l~----~-~~~l~~~g~~~~--~~~~w~--g~li~~~-~~nv~ 71 (336)
T 1nhc_A 5 FTSASEASESIS-SCSDVVLSSIEVPAGETLD--LSDAA----D-GSTITFEGTTSF--GYKEWK--GPLIRFG-GKDLT 71 (336)
T ss_dssp ESSHHHHHHHGG-GCSEEEEESCEECTTCCEE--CTTCC----T-TCEEEEESEEEE--CCCCSC--CCSEECC-EESCE
T ss_pred ECCHHHHHHHHH-HhhccCCCeEEECCCEEEE--eeccC----C-CeEEEEeceEEc--cccccc--CcEEEEe-cCCEE
Confidence 467999999997 5788788999999999973 3 344 6 899999998876 345565 4578876 59999
Q ss_pred EEc---eeeeCCCCcccccccCCCCCCCCceeEEEEccCCeEEEeeEEecCcceEEEEeceecEEEEeEEEECCCC----
Q 043588 125 IIG---GALDAKGSSLWACKASGANCPDGATTLRFTNSNNIRINGLLSLNSQMFHIVINGCKDVHIEGVTVIAPGN---- 197 (397)
Q Consensus 125 I~G---G~idg~g~~~w~~~~~~~~~~~~~~~i~~~~~~nv~i~~v~i~~~~~~~i~~~~~~nv~i~n~~i~~~~~---- 197 (397)
|.| |+|||+|+.||..... .....||++|.+.+|+|++|++++++++|.|++++. |+|++|++++|.++.+
T Consensus 72 I~G~~gG~IdG~G~~~w~~~~~-~~~~~rp~~i~~~~~~nv~i~~i~i~nsp~~~i~i~-~~nv~i~~~~I~~~~~d~~~ 149 (336)
T 1nhc_A 72 VTMADGAVIDGDGSRWWDSKGT-NGGKTKPKFMYIHDVEDSTFKGINIKNTPVQAISVQ-ATNVHLNDFTIDNSDGDDNG 149 (336)
T ss_dssp EEECTTCEEECCGGGTCCSCTT-TSSSCCCCCEEEEEEEEEEEESCEEECCSSCCEEEE-EEEEEEESCEEECTTHHHHT
T ss_pred EEcCCCeEEECCccccccccCc-CCCCCCceEEEEeeeCcEEEEEEEEEeCCccEEEEE-eCCEEEEEEEEECCCccccc
Confidence 999 6999999999975432 224678999999999999999999999999999999 9999999999999753
Q ss_pred CCCCCceeeecceeEEEEecEEecCCceEEeCCCCeeEEEEeeEEecCceeEEeeecccCCcCCEEEEEEEeeEEeCCcc
Q 043588 198 SPNTDGIHVQLSTNVKITNCTIKTGDDCIPIGPGTKNLWIERVTCGPGHGISIGSLAKDLIEEGVQNVTVFKTVFTGTTN 277 (397)
Q Consensus 198 ~~~~DGi~~~~s~nv~I~n~~i~~~dD~i~i~~~s~nv~i~n~~~~~~~gi~igs~~~~~~~~~v~nI~i~n~~~~~~~~ 277 (397)
++|+|||++.+|+||+|+||+|.++||||++++ .+||+|+||+|.++||++|||++.+ ..+.++||+|+||+|.++.+
T Consensus 150 ~~ntDGidi~~s~nV~I~n~~i~~gDDciaiks-g~nI~i~n~~~~~ghGisiGS~g~~-~~~~v~nV~v~n~~~~~t~~ 227 (336)
T 1nhc_A 150 GHNTDGFDISESTGVYISGATVKNQDDCIAINS-GESISFTGGTCSGGHGLSIGSVGGR-DDNTVKNVTISDSTVSNSAN 227 (336)
T ss_dssp CCSCCSEEECSCEEEEEESCEEESSSEEEEESS-EEEEEEESCEEESSSEEEEEEESSS-SCCEEEEEEEEEEEEESCSE
T ss_pred CCCCCcEEecCCCeEEEEeCEEEcCCCEEEEeC-CeEEEEEeEEEECCcCceEccCccc-cCCCEEEEEEEeeEEECCCc
Confidence 689999999999999999999999999999999 5999999999999999999998765 45789999999999999999
Q ss_pred eEEEEeecCCCCceEEceEEEEEEEecCcc-cEEEeeecCCCCCCCCCCccceEEEeEEEEeEEEeeCC-CceEEEeecC
Q 043588 278 GFRIKSWARPSNGFVQGVSFIDAIMRNVQF-PIVIDQNYCPHNLNCPGQVSGVKINDITYQDIRGTSAT-PIAIKFDCST 355 (397)
Q Consensus 278 gi~i~~~~~~~~g~i~ni~~~ni~~~~~~~-~i~i~~~~~~~~~~~~~~~~~~~i~nI~f~ni~~~~~~-~~~~~i~~~~ 355 (397)
|++||+|.+ ++|.++||+|+|++|+++.. |+.|++.|++.. .+......++|+||+|+||+++... ..++.+.|.
T Consensus 228 girIkt~~g-~~G~v~nI~~~ni~~~~v~~~~i~i~~~y~~~~-~~~~p~~~~~i~~i~~~ni~gt~~~~~~~v~i~c~- 304 (336)
T 1nhc_A 228 GVRIKTIYK-ETGDVSEITYSNIQLSGITDYGIVIEQDYENGS-PTGTPSTGIPITDVTVDGVTGTLEDDATQVYILCG- 304 (336)
T ss_dssp EEEEEEETT-CCCEEEEEEEEEEEEEEESSEEEEEEEEEETTE-ECSCCCSSSCEEEEEEEEEEEEECTTCEEEEEECC-
T ss_pred EEEEEEECC-CCCEEeeeEEeeEEeeccccccEEEEeecCCCC-CCCCCCCCceEEEEEEEeEEEEeCCCCEEEEEEcC-
Confidence 999999977 78999999999999999986 999999987631 1111224578999999999999876 568999995
Q ss_pred CCceecEEEEeEEEEeCCCccceeeecccc
Q 043588 356 KYPCQGIKLQNINLRHLKQVAQSSCNNVIG 385 (397)
Q Consensus 356 ~~~i~ni~~~ni~i~~~~~~~~~~c~nv~~ 385 (397)
..||+||+|+||+++. +...+.|.|++.
T Consensus 305 ~~~c~ni~~~nv~i~~--~~~~~~C~n~~~ 332 (336)
T 1nhc_A 305 DGSCSDWTWSGVDLSG--GKTSDKCENVPS 332 (336)
T ss_dssp TTCEEEEEEEEEEEES--SBCCSCCBSCCT
T ss_pred CCcEecEEEEeEEEEc--CCCCcccCCCCC
Confidence 8999999999999994 345678999986
No 8
>1hg8_A Endopolygalacturonase; hydrolase, pectin degradation; HET: NAG; 1.73A {Fusarium moniliforme} SCOP: b.80.1.3
Probab=100.00 E-value=1.4e-54 Score=417.17 Aligned_cols=320 Identities=24% Similarity=0.415 Sum_probs=274.2
Q ss_pred chHHHHHHHHHHhhccCCCcEEEEcCceEEeece-eeeccCCCcceEEEEccEEEeeccccccCCCcceEEEecccceEE
Q 043588 47 DSTQAFAKAWDAACTSTESATINVPKGRYLLGSV-AFKGDCKSSDITFRIDGTLVAPADYRVLGQADNWLSFEGVSGVSI 125 (397)
Q Consensus 47 ddt~aiq~Ai~~a~~~~~g~~v~ip~G~Y~~~~~-~l~~~~~s~~~~l~~~G~l~~~~~~~~~~~~~~~i~~~~~~ni~I 125 (397)
.||+|||+|+++ |++.++++|+||+|+|+. + .|+ + +++|+++|.+.+ ++..|. .++|+.+.+ +||+|
T Consensus 6 ~~t~aiq~ai~~-c~~~gg~~v~vP~G~~l~--l~~l~----~-~~~l~~~g~~~~--~~~~w~-~g~~i~~~~-~ni~I 73 (349)
T 1hg8_A 6 TEYSGLATAVSS-CKNIVLNGFQVPTGKQLD--LSSLQ----N-DSTVTFKGTTTF--ATTADN-DFNPIVISG-SNITI 73 (349)
T ss_dssp SSGGGHHHHHHH-CSEEEECCCEECTTCCEE--ETTCC----T-TCEEEECSEEEE--CCCCCT-TCCSEEEEE-ESCEE
T ss_pred CCHHHHHHHHHh-ccccCCCEEEECCCEEEE--eeccC----C-CeEEEEcCceec--cccccc-CCceEEEEC-ccEEE
Confidence 378999999974 687778999999999974 3 344 6 899999998876 335562 256888864 99999
Q ss_pred Ec---eeeeCCCCcccccccCCCCCCCCceeEEE-E-ccCCeEEEeeEEecCcceEEEEeceecEEEEeEEEECCC-C--
Q 043588 126 IG---GALDAKGSSLWACKASGANCPDGATTLRF-T-NSNNIRINGLLSLNSQMFHIVINGCKDVHIEGVTVIAPG-N-- 197 (397)
Q Consensus 126 ~G---G~idg~g~~~w~~~~~~~~~~~~~~~i~~-~-~~~nv~i~~v~i~~~~~~~i~~~~~~nv~i~n~~i~~~~-~-- 197 (397)
.| |+|||+|+.||...........||++|.+ . .++|++|++++++++|.|++++..|+|++|++++|.++. +
T Consensus 74 ~G~~~G~IdG~G~~ww~~~~~~~~~~~rP~~i~~~~~~~~nv~I~giti~nsp~~~i~i~~~~nv~i~~~~I~~~~~~~~ 153 (349)
T 1hg8_A 74 TGASGHVIDGNGQAYWDGKGSNSNSNQKPDHFIVVQKTTGNSKITNLNIQNWPVHCFDITGSSQLTISGLILDNRAGDKP 153 (349)
T ss_dssp EECTTCEEECCGGGTCCSCTTCTTSCCCCSEEEEEEEEESSEEEESCEEECCSSEEEEEESCEEEEEEEEEEECGGGSSC
T ss_pred EecCCCEEcCCcchhhhcccccCCCCCCCeEEEEeecCcCcEEEEEEEEEcCCCceEEEeccCCEEEEEEEEECCCCccc
Confidence 99 89999999999864331122268999999 7 788999999999999999999999999999999999853 2
Q ss_pred ---------CCCCCceeeecceeEEEEecEEecCCceEEeCCCCeeEEEEeeEEecCceeEEeeecccCCcCCEEEEEEE
Q 043588 198 ---------SPNTDGIHVQLSTNVKITNCTIKTGDDCIPIGPGTKNLWIERVTCGPGHGISIGSLAKDLIEEGVQNVTVF 268 (397)
Q Consensus 198 ---------~~~~DGi~~~~s~nv~I~n~~i~~~dD~i~i~~~s~nv~i~n~~~~~~~gi~igs~~~~~~~~~v~nI~i~ 268 (397)
++|+|||++.+|+||+|+||++.++||||++++ ++||+|+||+|.++||++|||+|.+ +.+.++||+|+
T Consensus 154 ~~~~~~~~~~~NtDGid~~~s~nV~I~n~~i~~gDDcIaiks-g~nI~i~n~~~~~ghGisiGS~G~~-~~~~v~nV~v~ 231 (349)
T 1hg8_A 154 NAKSGSLPAAHNTDGFDISSSDHVTLDNNHVYNQDDCVAVTS-GTNIVVSNMYCSGGHGLSIGSVGGK-SDNVVDGVQFL 231 (349)
T ss_dssp CTTTTTSCSCCSCCSEEEESCEEEEEEEEEEECSSCSEEESS-EEEEEEEEEEEESSCCEEEEEESSS-SCCEEEEEEEE
T ss_pred cccccccccCCCCCeEEEccccEEEEEeeEEecCCCeEEeeC-CeEEEEEeEEEeCCcceEEcccccc-ccCCEEEEEEE
Confidence 479999999999999999999999999999999 6999999999999999999999766 45789999999
Q ss_pred eeEEeCCcceEEEEeecCCCCceEEceEEEEEEEecCc-ccEEEeeecCCCCCCCCCCccceEEEeEEEEeEEEeeCC-C
Q 043588 269 KTVFTGTTNGFRIKSWARPSNGFVQGVSFIDAIMRNVQ-FPIVIDQNYCPHNLNCPGQVSGVKINDITYQDIRGTSAT-P 346 (397)
Q Consensus 269 n~~~~~~~~gi~i~~~~~~~~g~i~ni~~~ni~~~~~~-~~i~i~~~~~~~~~~~~~~~~~~~i~nI~f~ni~~~~~~-~ 346 (397)
||+|.++.+|++||++++ ++|.++||+|+|++|+++. +||.|++.|++.. .+......++|+||+|+||+++... .
T Consensus 232 n~~~~~~~~GirIKt~~g-~~G~v~nI~~~ni~~~~v~~~~i~i~~~Y~~~~-~~~~p~~~~~i~~I~~~ni~gt~~~~~ 309 (349)
T 1hg8_A 232 SSQVVNSQNGCRIKSNSG-ATGTINNVTYQNIALTNISTYGVDVQQDYLNGG-PTGKPTNGVKISNIKFIKVTGTVASSA 309 (349)
T ss_dssp EEEEEEEEEEEEEEEETT-CCEEEEEEEEEEEEEEEEEEEEEEEEEEECSSS-BCSCCCSSEEEEEEEEEEEEEEECTTS
T ss_pred EEEEECCCcEEEEEecCC-CCccccceEEEEEEEEccccccEEEEeeccCCC-CCCcccCCceEEEEEEEeEEEEeCCCC
Confidence 999999999999999987 7899999999999999997 6999999998632 1122234579999999999999875 5
Q ss_pred ceEEEeecCCCceecEEEEeEEEEeCCCccceeeecccc
Q 043588 347 IAIKFDCSTKYPCQGIKLQNINLRHLKQVAQSSCNNVIG 385 (397)
Q Consensus 347 ~~~~i~~~~~~~i~ni~~~ni~i~~~~~~~~~~c~nv~~ 385 (397)
.++.+.|+ +.||+||+|+||+++. +.....|.|++.
T Consensus 310 ~~v~i~c~-~~~c~ni~~~nv~i~~--~~~~~~C~n~~~ 345 (349)
T 1hg8_A 310 QDWFILCG-DGSCSGFTFSGNAITG--GGKTSSCNYPTN 345 (349)
T ss_dssp EEEEEECC-SSCEEEEEEESCEEEC--CSSCCEECSSSS
T ss_pred EEEEEEeC-CCcCcCEEEEeEEEEc--CCCCeeeeCCCC
Confidence 68999998 6999999999999984 345678999987
No 9
>1ia5_A Polygalacturonase; glycosylhydrolase, hydrolase; HET: MAN NAG; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3 PDB: 1ib4_A*
Probab=100.00 E-value=2.5e-54 Score=414.03 Aligned_cols=315 Identities=23% Similarity=0.427 Sum_probs=273.0
Q ss_pred hHHHHHHHHHHhhccCCCcEEEEcCceEEeece-eeeccCCCcceEEEEccEEEeeccccccCCCcceEEEecccceEEE
Q 043588 48 STQAFAKAWDAACTSTESATINVPKGRYLLGSV-AFKGDCKSSDITFRIDGTLVAPADYRVLGQADNWLSFEGVSGVSII 126 (397)
Q Consensus 48 dt~aiq~Ai~~a~~~~~g~~v~ip~G~Y~~~~~-~l~~~~~s~~~~l~~~G~l~~~~~~~~~~~~~~~i~~~~~~ni~I~ 126 (397)
-++|||+|++ +|+..++++|+||+|+|+. + .|+ + +++|+++|.+.+ ++..|. ++|+.+.+ +||+|.
T Consensus 11 g~~aiq~ai~-~c~~~gg~~v~vP~G~~l~--l~~l~----~-~~~l~~~g~~~~--~~~~w~--g~li~~~~-~nv~I~ 77 (339)
T 1ia5_A 11 GASSASKSKT-SCSTIVLSNVAVPSGTTLD--LTKLN----D-GTHVIFSGETTF--GYKEWS--GPLISVSG-SDLTIT 77 (339)
T ss_dssp HHHHHHHHGG-GCSEEEEESCEECTTCCEE--ECSCC----T-TCEEEEESEEEE--CCCCSC--CCSEEEEE-ESCEEE
T ss_pred chHHHHHHHH-HhhccCCCeEEECCCEEEE--eeccC----C-CeEEEEeCcEEc--cccccc--CcEEEEEc-CcEEEE
Confidence 3679999996 5788788999999999973 3 444 6 999999998876 345665 46888875 999999
Q ss_pred c---eeeeCCCCcccccccCCCCCCCCceeEEEEccCCeEEEeeEEecCcceEEEEeceecEEEEeEEEECCC-C---CC
Q 043588 127 G---GALDAKGSSLWACKASGANCPDGATTLRFTNSNNIRINGLLSLNSQMFHIVINGCKDVHIEGVTVIAPG-N---SP 199 (397)
Q Consensus 127 G---G~idg~g~~~w~~~~~~~~~~~~~~~i~~~~~~nv~i~~v~i~~~~~~~i~~~~~~nv~i~n~~i~~~~-~---~~ 199 (397)
| |+|||+|+.||..... .....||++|.+.+|+|++|++++++++|.|++++..|+|++|++++|.++. + ++
T Consensus 78 G~~gG~IdG~G~~~w~~~~~-~~~~~rp~~i~~~~~~nv~i~~i~i~nsp~~~i~i~~~~nv~i~~~~I~~~~~d~~~~~ 156 (339)
T 1ia5_A 78 GASGHSINGDGSRWWDGEGG-NGGKTKPKFFAAHSLTNSVISGLKIVNSPVQVFSVAGSDYLTLKDITIDNSDGDDNGGH 156 (339)
T ss_dssp ECTTCEEECCGGGTCSSCTT-TSSSCCCCCEEEEEEEEEEEESCEEECCSSCCEEEESCEEEEEESCEEECGGGTTTTCC
T ss_pred cCCCeEEeCCCCcccccccc-CCCCCCCeEEEEeecCcEEEEEEEEEcCCcceEEEecccCeEEeeEEEECCccccccCC
Confidence 9 5999999999975432 2246789999999999999999999999999999999999999999999864 3 68
Q ss_pred CCCceeeecceeEEEEecEEecCCceEEeCCCCeeEEEEeeEEecCceeEEeeecccCCcCCEEEEEEEeeEEeCCcceE
Q 043588 200 NTDGIHVQLSTNVKITNCTIKTGDDCIPIGPGTKNLWIERVTCGPGHGISIGSLAKDLIEEGVQNVTVFKTVFTGTTNGF 279 (397)
Q Consensus 200 ~~DGi~~~~s~nv~I~n~~i~~~dD~i~i~~~s~nv~i~n~~~~~~~gi~igs~~~~~~~~~v~nI~i~n~~~~~~~~gi 279 (397)
|+|||++.+|+||+|+||+|.++||||++++ .+||+|+||+|.++||++|||++.+ ..+.++||+|+||+|.++.+|+
T Consensus 157 ntDGid~~~s~nV~I~n~~i~~gDDcIaiks-g~nI~i~n~~~~~ghGisiGS~g~~-~~~~v~nV~v~n~~~~~t~~gi 234 (339)
T 1ia5_A 157 NTDAFDIGTSTYVTISGATVYNQDDCVAVNS-GENIYFSGGYCSGGHGLSIGSVGGR-SDNTVKNVTFVDSTIINSDNGV 234 (339)
T ss_dssp SCCSEEEESCEEEEEESCEEECSSCSEEESS-EEEEEEESCEEESSSCEEEEEECSS-SCCEEEEEEEEEEEEESCSEEE
T ss_pred CCCcEEecCCceEEEEeeEEEcCCCeEEEeC-CeEEEEEeEEEECCceEEECcCCcc-cCCCEEEEEEEeeEEECCCcEE
Confidence 9999999999999999999999999999999 5999999999999999999998765 4578999999999999999999
Q ss_pred EEEeecCCCCceEEceEEEEEEEecCcc-cEEEeeecCCCCCCCCCCccceEEEeEEEEeEEEeeCC-CceEEEeecCCC
Q 043588 280 RIKSWARPSNGFVQGVSFIDAIMRNVQF-PIVIDQNYCPHNLNCPGQVSGVKINDITYQDIRGTSAT-PIAIKFDCSTKY 357 (397)
Q Consensus 280 ~i~~~~~~~~g~i~ni~~~ni~~~~~~~-~i~i~~~~~~~~~~~~~~~~~~~i~nI~f~ni~~~~~~-~~~~~i~~~~~~ 357 (397)
+||+|.+ ++|.++||+|+|++|+++.. ||.|++.|.. .. ......++|+||+|+||+++... ..++.+.|+ ..
T Consensus 235 rIKt~~g-~~G~v~nI~~~ni~~~~v~~~~i~i~~~y~~-~~--~~p~~~~~i~ni~~~ni~gt~~~~~~~v~i~c~-~~ 309 (339)
T 1ia5_A 235 RIKTNID-TTGSVSDVTYKDITLTSIAKYGIVVQQNYGD-TS--STPTTGVPITDFVLDNVHGSVVSSGTNILISCG-SG 309 (339)
T ss_dssp EEEEETT-CCCEEEEEEEEEEEEEEESSEEEEEEEEETC-TT--SCCCSSSCEEEEEEEEEEEEECTTSEEEEEECC-TT
T ss_pred EEEEeCC-CCcEEEeeEEEEEEEECcccccEEEEccCCC-CC--CCCcCCceEEEEEEEeEEEEeCCCCEEEEEEeC-CC
Confidence 9999987 78999999999999999886 9999999832 22 11224578999999999999875 568999995 88
Q ss_pred ceecEEEEeEEEEeCCCccceeeecccc
Q 043588 358 PCQGIKLQNINLRHLKQVAQSSCNNVIG 385 (397)
Q Consensus 358 ~i~ni~~~ni~i~~~~~~~~~~c~nv~~ 385 (397)
||+||+|+||+++. +...+.|.|++.
T Consensus 310 ~c~ni~~~nv~i~~--~~~~~~C~n~~~ 335 (339)
T 1ia5_A 310 SCSDWTWTDVSVSG--GKTSSKCTNVPS 335 (339)
T ss_dssp CEEEEEEEEEEEES--SBCCSCCBSCCT
T ss_pred CEecEEEEeEEEEC--CCCCeeeECCCC
Confidence 99999999999984 445678999986
No 10
>1k5c_A Endopolygalacturonase; beta helical structure, glycoside hydrolase, silver-LEAF IND substance, hydrolase; HET: NAG; 0.96A {Chondrostereum purpureum} SCOP: b.80.1.3 PDB: 1kcc_A* 1kcd_A*
Probab=100.00 E-value=8.4e-54 Score=408.77 Aligned_cols=307 Identities=22% Similarity=0.388 Sum_probs=263.5
Q ss_pred HHHHHHHHHHhhccCCCcEEEEcCceEEeeceeeeccCCCcceEEEEccEEEeeccccccCCCcceEEEecccceEEEc-
Q 043588 49 TQAFAKAWDAACTSTESATINVPKGRYLLGSVAFKGDCKSSDITFRIDGTLVAPADYRVLGQADNWLSFEGVSGVSIIG- 127 (397)
Q Consensus 49 t~aiq~Ai~~a~~~~~g~~v~ip~G~Y~~~~~~l~~~~~s~~~~l~~~G~l~~~~~~~~~~~~~~~i~~~~~~ni~I~G- 127 (397)
++|||+ ++ +|++.++++|+||+|+|+ .|.|+ + +++|+++|++.+ .+..|. ++|+.+. .+||+|.|
T Consensus 8 ~~aiq~-i~-aC~~~gg~~v~vP~G~~l--~l~l~----~-~~~l~~~g~~~~--~~~~w~--~~~i~~~-~~ni~I~G~ 73 (335)
T 1k5c_A 8 VDDAKD-IA-GCSAVTLNGFTVPAGNTL--VLNPD----K-GATVTMAGDITF--AKTTLD--GPLFTID-GTGINFVGA 73 (335)
T ss_dssp TTGGGG-CT-TCSEEEECCEEECTTCCE--EECCC----T-TCEEEECSCEEE--CCCCSC--SCSEEEE-EEEEEEECT
T ss_pred HHHhHH-HH-hcccCCCCEEEECCCEEE--EEEeC----C-CeEEEEeccEec--cccccc--CcEEEEE-ccCEEEEeC
Confidence 678999 85 688888899999999997 34555 6 999999998876 346675 4688887 59999999
Q ss_pred -eeeeCCCCcccccccCCCCCCCCceeEEEEccCCeEEEeeEEecCcceEEEEeceec-EEEEeEEEECCCC-----CCC
Q 043588 128 -GALDAKGSSLWACKASGANCPDGATTLRFTNSNNIRINGLLSLNSQMFHIVINGCKD-VHIEGVTVIAPGN-----SPN 200 (397)
Q Consensus 128 -G~idg~g~~~w~~~~~~~~~~~~~~~i~~~~~~nv~i~~v~i~~~~~~~i~~~~~~n-v~i~n~~i~~~~~-----~~~ 200 (397)
|+|||+|+.||..... .....||++|.+.+|+ ++|++++++++|.|++++..|+| ++|+|++|.++++ ++|
T Consensus 74 ~G~idG~G~~ww~~~~~-~~~~~rP~~i~~~~~~-v~i~giti~nsp~~~i~i~~~~n~v~i~~v~I~~~~~d~~~~~~N 151 (335)
T 1k5c_A 74 DHIFDGNGALYWDGKGT-NNGTHKPHPFLKIKGS-GTYKKFEVLNSPAQAISVGPTDAHLTLDGITVDDFAGDTKNLGHN 151 (335)
T ss_dssp TCEEECCGGGTCCSCTT-TSSSCCCCCSEEEEEE-EEEESCEEESCSSCCEEEEEEEEEEEEESCEEECGGGGGGGCCCS
T ss_pred ccEEcCChhHhhhcccc-cCCCCCCeEEEEeceE-EEEEEEEEECCCcceEEEEccCCeEEEEEEEEECCCCcccccCCC
Confidence 8999999999975432 2246789999999999 99999999999999999999999 9999999999743 789
Q ss_pred CCceeeecceeEEEEecEEecCCceEEeCCCCeeEEEEeeEEecCceeEEeeecccCCcCCEEEEEEEeeEEeCCcceEE
Q 043588 201 TDGIHVQLSTNVKITNCTIKTGDDCIPIGPGTKNLWIERVTCGPGHGISIGSLAKDLIEEGVQNVTVFKTVFTGTTNGFR 280 (397)
Q Consensus 201 ~DGi~~~~s~nv~I~n~~i~~~dD~i~i~~~s~nv~i~n~~~~~~~gi~igs~~~~~~~~~v~nI~i~n~~~~~~~~gi~ 280 (397)
+|||++ +|+||+|+||++.++||||+++++ +||+|+||+|.++||++|||++. .+.++||+|+||+|.++.+|++
T Consensus 152 tDGidi-~s~nV~I~n~~i~~gDDcIaiksg-~nI~i~n~~~~~ghGisIGS~g~---~~~v~nV~v~n~~~~~t~~gir 226 (335)
T 1k5c_A 152 TDGFDV-SANNVTIQNCIVKNQDDCIAINDG-NNIRFENNQCSGGHGISIGSIAT---GKHVSNVVIKGNTVTRSMYGVR 226 (335)
T ss_dssp CCSEEE-ECSSEEEESCEEESSSCSEEEEEE-EEEEEESCEEESSCCEEEEEECT---TCEEEEEEEESCEEEEEEEEEE
T ss_pred CCeEcc-cCCeEEEEeeEEEcCCCEEEeeCC-eeEEEEEEEEECCccCeEeeccC---CCCEEEEEEEeeEEECCCceEE
Confidence 999999 999999999999999999999994 99999999999999999999853 4689999999999999999999
Q ss_pred EEeecCCCC-ceEEceEEEEEEEecCc-ccEEEeeecCCCCCCCCCCccceEEEeEEEEeEE--EeeCC-CceEEEeecC
Q 043588 281 IKSWARPSN-GFVQGVSFIDAIMRNVQ-FPIVIDQNYCPHNLNCPGQVSGVKINDITYQDIR--GTSAT-PIAIKFDCST 355 (397)
Q Consensus 281 i~~~~~~~~-g~i~ni~~~ni~~~~~~-~~i~i~~~~~~~~~~~~~~~~~~~i~nI~f~ni~--~~~~~-~~~~~i~~~~ 355 (397)
||++++ ++ |.++||+|+|++|+++. +|+.|++.|.. .. ......++|+||+|+||+ ++... ..++.+.|++
T Consensus 227 IKt~~g-~~~G~v~nI~f~ni~~~~v~~~~i~i~~~Y~~-~~--~~p~~~~~i~nI~~~nI~~~Gt~~~~~~~i~i~c~~ 302 (335)
T 1k5c_A 227 IKAQRT-ATSASVSGVTYDANTISGIAKYGVLISQSYPD-DV--GNPGTGAPFSDVNFTGGATTIKVNNAATRVTVECGN 302 (335)
T ss_dssp EEEETT-CCSCEEEEEEEESCEEEEEEEEEEEEEEEETS-SS--SSCCSSSCEEEEEECSSCEEEEECTTCEEEEEECSS
T ss_pred EEEeCC-CCcceEeeeEEEEEEEEccccccEEEEeeCCC-CC--CCCCCCceEEEEEEEEEEEeeEEcCCceEEEEECCC
Confidence 999987 66 99999999999999997 69999998832 21 112245789999999999 77654 5689999986
Q ss_pred CCceecEEEEeEEEEeCCCccceeeecc
Q 043588 356 KYPCQGIKLQNINLRHLKQVAQSSCNNV 383 (397)
Q Consensus 356 ~~~i~ni~~~ni~i~~~~~~~~~~c~nv 383 (397)
||+||+|+||+++..+ .....|.++
T Consensus 303 --~c~ni~~~nv~i~~~~-~~~~~~~~~ 327 (335)
T 1k5c_A 303 --CSGNWNWSQLTVTGGK-AGTIKSDKA 327 (335)
T ss_dssp --EESEEEEEEEEEESSB-CCCEECTTC
T ss_pred --cCCCEEEEeEEEEcCC-CCceEeEEe
Confidence 9999999999999643 333554444
No 11
>2x6w_A Tail spike protein; viral protein, beta-helix, hydrolase; HET: RAM GLC GLA NAG NDG; 1.35A {Enterobacteria phage HK620} PDB: 2vji_A 2vjj_A* 2x85_A* 2x6x_A* 2x6y_A*
Probab=100.00 E-value=7.1e-47 Score=375.35 Aligned_cols=292 Identities=16% Similarity=0.164 Sum_probs=245.0
Q ss_pred ceeEEeeccCccCCCCcchHHHHHHHHHHhhccCCCcEEEEcCc-eEEe------------eceeeeccCCCcceEEEEc
Q 043588 30 TTTYNVLSFGAKGNGVTDSTQAFAKAWDAACTSTESATINVPKG-RYLL------------GSVAFKGDCKSSDITFRID 96 (397)
Q Consensus 30 ~~~~~v~d~GA~~dg~tddt~aiq~Ai~~a~~~~~g~~v~ip~G-~Y~~------------~~~~l~~~~~s~~~~l~~~ 96 (397)
...++|+||||++| ||+|||+||+ +|++.+|++|+||+| +|++ +++.|+ | +++|+++
T Consensus 49 ~~~~nV~dfGA~gD----dT~AIqkAId-aCs~~GGgtV~VPaG~tYLt~sv~~gp~~~~sGpI~Lk----S-nVtL~Ld 118 (600)
T 2x6w_A 49 DPSGNVIQPGPNVD----SRQYLQAAID-YVSSNGGGTITIPAGYTWYLGSYGVGGIAGHSGIIQLR----S-NVNLNIE 118 (600)
T ss_dssp CTTSCBCCCCTTCC----CHHHHHHHHH-HHHHTTCEEEEECTTCEEEECSCCCGGGGGGTEEEECC----T-TEEEEEC
T ss_pred CcEEeeecCCCCcc----CHHHHHHHHH-HhhhcCCCEEEECCCCEEEecccccccccccccceEEc----C-ceEEeee
Confidence 45899999999998 9999999997 578889999999999 9999 888887 7 9999999
Q ss_pred cEEEeeccccccCCC-------cceEEEecccceEEEc-eeeeCCCCcccccccCCCCCCCCceeEEEEccCCeEEEeeE
Q 043588 97 GTLVAPADYRVLGQA-------DNWLSFEGVSGVSIIG-GALDAKGSSLWACKASGANCPDGATTLRFTNSNNIRINGLL 168 (397)
Q Consensus 97 G~l~~~~~~~~~~~~-------~~~i~~~~~~ni~I~G-G~idg~g~~~w~~~~~~~~~~~~~~~i~~~~~~nv~i~~v~ 168 (397)
|+|+++.+...|+.. .+++.+.+++||+|.| |+|||+|+.||.... ....||+ +.+.+|+ |+|++
T Consensus 119 GtL~as~d~~~yp~~~~v~~~w~slI~~~~~~NItItG~GtIDGqG~~wW~~~~---~~~~RP~-l~f~~c~---I~GIT 191 (600)
T 2x6w_A 119 GRIHLSPFFDLKPFQVFVGFDNGDPASSGNLENCHIYGHGVVDFGGYEFGASSQ---LRNGVAF-GRSYNCS---VTGIT 191 (600)
T ss_dssp SEEEECGGGTTSCEEEEECCSSSSGGGCCCEEEEEEESSCEEECTTCCCSSTTC---CEEEEEC-CSEEEEE---EESCE
T ss_pred cEEEEcCChHHCcccccccccccceEEEecceeEEEecceeeeCCccccccccc---cCCCCCE-EEEeeeE---EeCeE
Confidence 999999999888742 2337788899999999 999999999996321 1113677 7888887 99999
Q ss_pred EecC-cceEEEE---eceecEEEEeEE----EECCCCCCCCCceeeecceeEEEEecEEecCCceEEe-CCCCe-eEEEE
Q 043588 169 SLNS-QMFHIVI---NGCKDVHIEGVT----VIAPGNSPNTDGIHVQLSTNVKITNCTIKTGDDCIPI-GPGTK-NLWIE 238 (397)
Q Consensus 169 i~~~-~~~~i~~---~~~~nv~i~n~~----i~~~~~~~~~DGi~~~~s~nv~I~n~~i~~~dD~i~i-~~~s~-nv~i~ 238 (397)
++|+ |.|++++ ..|+|++|+|++ |.+ ++|+||| |+|+||+|.++||||++ ++++. ++.++
T Consensus 192 i~NSDP~w~I~iG~~~~c~NVtI~nvtfi~aI~s---spNTDGI-------V~I~nc~I~tGDDCIAI~KSGs~~ni~~e 261 (600)
T 2x6w_A 192 FQNGDVTWAITLGWNGYGSNCYVRKCRFINLVNS---SVNADHS-------TVYVNCPYSGVESCYFSMSSSFARNIACS 261 (600)
T ss_dssp EESCCCSCSEEECBTTBEEEEEEESCEEECCCCC---SSCCCEE-------EEEECSSSEEEESCEEECCCTTHHHHEEE
T ss_pred EECCCCccEEEeCCCCCcccEEEeCeEEcceEec---CCCCCEE-------EEEEeeEEecCCcEEEEecCCCcCCeEEE
Confidence 9999 9999999 999999999999 776 5899999 99999999999999999 99864 46777
Q ss_pred eeEEecCc-eeEEeeecccCCcCCEEEEEEEeeEEeCCcceEEEEeecCCCCceEEceEEEEEEEecCcccEEEeeecCC
Q 043588 239 RVTCGPGH-GISIGSLAKDLIEEGVQNVTVFKTVFTGTTNGFRIKSWARPSNGFVQGVSFIDAIMRNVQFPIVIDQNYCP 317 (397)
Q Consensus 239 n~~~~~~~-gi~igs~~~~~~~~~v~nI~i~n~~~~~~~~gi~i~~~~~~~~g~i~ni~~~ni~~~~~~~~i~i~~~~~~ 317 (397)
.+.++| |++|||+ ..+.++||+|+| +||++.+ ++|.++||+|+|++|+++..++.+.+..
T Consensus 262 --~~~~GHgGISIGSe----~~ggV~NV~V~N----------rIKt~~G-~GG~V~NItfeNI~m~nV~~~I~i~q~~-- 322 (600)
T 2x6w_A 262 --VQLHQHDTFYRGST----VNGYCRGAYVVM----------HAAEAAG-AGSYAYNMQVENNIAVIYGQFVILGSDV-- 322 (600)
T ss_dssp --EEECSSSEEEESCE----EEEESEEEEEEE----------CGGGCTT-TCSEEEEEEEESCEEEESSEEEEEEECB--
T ss_pred --EEcCCCCcEEeccc----ccCcEEEEEEEE----------EEEeecC-CCceEEEEEEEEEEEEccceEEEeCCCC--
Confidence 667777 8999997 456799999999 4555555 7799999999999999999888887641
Q ss_pred CCCCCCCCccceEEEeEEEEeEEEeeCCC------ceEEEeecC-------CCceecEEEEeEEEEeCC
Q 043588 318 HNLNCPGQVSGVKINDITYQDIRGTSATP------IAIKFDCST-------KYPCQGIKLQNINLRHLK 373 (397)
Q Consensus 318 ~~~~~~~~~~~~~i~nI~f~ni~~~~~~~------~~~~i~~~~-------~~~i~ni~~~ni~i~~~~ 373 (397)
...+.++|+||+|+||+++.... ....+.+.| +.+|++|+|+|+++..++
T Consensus 323 ------~~~s~~~IsnItfkNItgTsas~aav~~~~g~~i~g~p~~~~~~~~~~Ie~V~~~~~~~~~~~ 385 (600)
T 2x6w_A 323 ------TATVSGHLNDVIVSGNIVSIGERAAFSAPFGAFIDIGPDNSGASNVQDIQRVLVTGNSFYAPA 385 (600)
T ss_dssp ------CSSCBCEEEEEEEESCEEEECSCCTTSSSCEEEEEECCCTTCCSSSCCEEEEEEESCEEECCT
T ss_pred ------CCCCCceEEEEEEEeEEEEeccccccccccceEEEecCcccccccccceeEEEEeceEEEcCC
Confidence 12345699999999999987532 235666655 368999999999997655
No 12
>1x0c_A Isopullulanase; glycoside hydrolase family 49, glycoprotein, hydro; HET: NAG; 1.70A {Aspergillus niger} PDB: 1wmr_A* 2z8g_A*
Probab=100.00 E-value=2.6e-40 Score=333.49 Aligned_cols=302 Identities=11% Similarity=0.088 Sum_probs=235.3
Q ss_pred EeeccCccCCCCcchHHHHHHHHHHhhcc-------------------------CCCcEEEEcCceEEe---eceeeecc
Q 043588 34 NVLSFGAKGNGVTDSTQAFAKAWDAACTS-------------------------TESATINVPKGRYLL---GSVAFKGD 85 (397)
Q Consensus 34 ~v~d~GA~~dg~tddt~aiq~Ai~~a~~~-------------------------~~g~~v~ip~G~Y~~---~~~~l~~~ 85 (397)
+...|||++||.+|++.+|. ++..+|.. .+|++|+||+|+|++ +++.|+
T Consensus 144 n~~~~~~~~dg~~~~~~~l~-ifa~p~~~~~~~P~~~~~~~~~~~~g~~~~~~~~ggg~v~vP~G~yl~g~~G~i~l~-- 220 (549)
T 1x0c_A 144 DDDLISLAPSGARQPENALL-IFASPFENSSTKPQPGSPNSIAPAPGRVLGLNTTSASTVVFNPGVYYFTGHDHMVLS-- 220 (549)
T ss_dssp GGGEEEETTTTEEEESEEEE-EEEECCCCTTTSCCTTCSSEECCCSEECCCTTTCCCSEEEECSEEEECCTTCCEEEC--
T ss_pred CCccccccccCcCCCcceEE-EEcCChhhccCCCCcCCCCceeeccccccccccCCCCEEEECCeEEecCCceEEEec--
Confidence 33368999999999998887 44333433 468999999999996 579998
Q ss_pred CCCcceE-EEEc-c-EEEeeccccccCCCcceEEEecccceEEEc-eeeeCCCCcccccccCCC--CCCCCceeEEE---
Q 043588 86 CKSSDIT-FRID-G-TLVAPADYRVLGQADNWLSFEGVSGVSIIG-GALDAKGSSLWACKASGA--NCPDGATTLRF--- 156 (397)
Q Consensus 86 ~~s~~~~-l~~~-G-~l~~~~~~~~~~~~~~~i~~~~~~ni~I~G-G~idg~g~~~w~~~~~~~--~~~~~~~~i~~--- 156 (397)
| +++ |+++ | .|+++ +....+++|++|.| |+|||+|..||....... ....||++|.+
T Consensus 221 --s-~~~~L~l~~GA~L~gs-----------~~~~~~~~nv~ItG~GtIDG~G~~ww~~~~~~~~~~~~~rp~~i~~~~~ 286 (549)
T 1x0c_A 221 --S-SVTWVYFAPGAYVKGA-----------VEFLSTASEVKASGHGVLSGEQYVWYADPDEGYQKASGANNNGLRMWRG 286 (549)
T ss_dssp --T-TCCEEEECTTEEEESC-----------EEECCCSSEEEEESSCEEECTTSCTTEEGGGTTEECGGGCSCCCCSEEE
T ss_pred --C-CCCeEecCCCCEEEEE-----------EEEecCceeEEEEeeEEEECCCceecccCcccccccccCCCceEEEeec
Confidence 7 999 9998 6 44431 22233799999999 999999999995332110 12236777777
Q ss_pred ---EccCCeEEEeeEEecCcceEEEEe-ce-ec--EEEEeEEEECCCCCCCCCceeeecceeEEEEecEEecCCceEEeC
Q 043588 157 ---TNSNNIRINGLLSLNSQMFHIVIN-GC-KD--VHIEGVTVIAPGNSPNTDGIHVQLSTNVKITNCTIKTGDDCIPIG 229 (397)
Q Consensus 157 ---~~~~nv~i~~v~i~~~~~~~i~~~-~~-~n--v~i~n~~i~~~~~~~~~DGi~~~~s~nv~I~n~~i~~~dD~i~i~ 229 (397)
.+|+|++|+|++++|+|.|++++. .| ++ ++|+|+++.++. .+|+|||++. +||+|+||+|.++||||+++
T Consensus 287 ~~~~~c~nV~I~Giti~Nsp~w~i~i~~~~~~ni~V~I~n~~i~~~~-~~NTDGidi~--~nV~I~n~~i~~gDDcIaIk 363 (549)
T 1x0c_A 287 TLGNSSQTFVLNGVTVSAPPFNSMDWSGNSLDLITCRVDDYKQVGAF-YGQTDGLEMY--PGTILQDVFYHTDDDGLKMY 363 (549)
T ss_dssp ECCSSCEEEEEESCEEECCSSCSEEEECSCGGGEEEEEEEEEEECCC-BTTCCCCBCC--TTCEEEEEEEEESSCCEECC
T ss_pred cccCCceEEEEECcEEECCCceeEEeeccCCCCCeEEEEeeEeEcCC-CCCCCccccc--CCEEEEeeEEeCCCCEEEEC
Confidence 999999999999999999999966 55 69 999999999753 3689999998 99999999999999999999
Q ss_pred CCCeeEEEEeeEEecC--ce-eEEeeecccCCcCCEEEEEEEeeEEeCCcc------eEEEEee--c--C------CCCc
Q 043588 230 PGTKNLWIERVTCGPG--HG-ISIGSLAKDLIEEGVQNVTVFKTVFTGTTN------GFRIKSW--A--R------PSNG 290 (397)
Q Consensus 230 ~~s~nv~i~n~~~~~~--~g-i~igs~~~~~~~~~v~nI~i~n~~~~~~~~------gi~i~~~--~--~------~~~g 290 (397)
+ +||+|+||+|+.+ ++ +++|+. .+.++||+|+||+|.++.. |..|++. + + ...|
T Consensus 364 s--~NI~I~n~~~~~~~g~~~IsiGs~-----~~~V~NV~v~n~~i~~s~~~k~~~~g~iI~~~~~~~~g~~~~~~d~~G 436 (549)
T 1x0c_A 364 Y--SNVTARNIVMWKESVAPVVEFGWT-----PRNTENVLFDNVDVIHQAYANAGNNPGIFGAVNNYLYAPDGLSSNHST 436 (549)
T ss_dssp S--SSEEEEEEEEEECSSSCSEECCBS-----CCCEEEEEEEEEEEEECCCCSGGGCCCSEEECCBTTTCTTSCCSCCCC
T ss_pred C--CCEEEEeeEEEcCCCCceEEECCC-----CCcEEEEEEEeeEEECccccccccceEEEecccccccCccccCcCCCc
Confidence 8 9999999999764 56 899883 4789999999999998753 4447751 1 1 1267
Q ss_pred eEEceEEEEEEEecCc-ccEEEeeecCCCCCCCCCCccceEEEeEEEEeEEEeeCC-----CceEEEeecCC------Cc
Q 043588 291 FVQGVSFIDAIMRNVQ-FPIVIDQNYCPHNLNCPGQVSGVKINDITYQDIRGTSAT-----PIAIKFDCSTK------YP 358 (397)
Q Consensus 291 ~i~ni~~~ni~~~~~~-~~i~i~~~~~~~~~~~~~~~~~~~i~nI~f~ni~~~~~~-----~~~~~i~~~~~------~~ 358 (397)
.|+||+|+||+|+++. +++.+...+ ..+..+++||+|+||++.... ..+..+.+.+. .+
T Consensus 437 ~i~nI~f~NI~i~nv~~~g~~~~~~~---------g~pg~~I~nI~i~NI~i~~~~~~~~~~~~~~i~G~~~~~~~~~~~ 507 (549)
T 1x0c_A 437 GNSNMTVRNITWSNFRAEGSSSALFR---------INPIQNLDNISIKNVSIESFEPLSINTTESWMPVWYDLNNGKQIT 507 (549)
T ss_dssp BEEEEEEEEEEEEEEEEEEEECCSEE---------ECCSEEEEEEEEEEEEEEEECCGGGTCSCEEECCCBBTTTCCBCC
T ss_pred eEccEEEEeEEEEeEEEeceEEeeec---------CCCCCcCccEEEEEEEEEccccccccccceEEeCCCcccccccee
Confidence 8999999999999987 666554332 113447999999999987654 33455655433 68
Q ss_pred eecEEEEeEEEEe
Q 043588 359 CQGIKLQNINLRH 371 (397)
Q Consensus 359 i~ni~~~ni~i~~ 371 (397)
|+||+|+||++..
T Consensus 508 v~nI~f~NV~i~G 520 (549)
T 1x0c_A 508 VTDFSIEGFTVGN 520 (549)
T ss_dssp EEEEEEEEEEETT
T ss_pred eeeEEEEeEEEeC
Confidence 9999999999863
No 13
>3gq8_A Preneck appendage protein; beta helix, viral protein; HET: NHE; 2.00A {Bacillus phage PHI29} PDB: 3gq7_A* 3gq9_A* 3gqa_A
Probab=100.00 E-value=5.9e-38 Score=313.11 Aligned_cols=269 Identities=18% Similarity=0.199 Sum_probs=205.8
Q ss_pred ceeEEeeccCccCCCCcchHHHHHHHHHHhhccCCCcEEEEcCceEEe-eceeeeccCCCcceEEEEcc----EEEeecc
Q 043588 30 TTTYNVLSFGAKGNGVTDSTQAFAKAWDAACTSTESATINVPKGRYLL-GSVAFKGDCKSSDITFRIDG----TLVAPAD 104 (397)
Q Consensus 30 ~~~~~v~d~GA~~dg~tddt~aiq~Ai~~a~~~~~g~~v~ip~G~Y~~-~~~~l~~~~~s~~~~l~~~G----~l~~~~~ 104 (397)
+..++|+||||+|||.+|||+|||+||++ |++|+||+|+|++ +++.|+ + +++|.+++ +|+++.+
T Consensus 20 ~~~~nV~dfGA~gDG~tDdT~Aiq~Ai~~------Gg~V~iP~GtYlis~~l~l~----s-nv~L~g~g~~~t~L~~~~~ 88 (609)
T 3gq8_A 20 QFGVSVKTYGAKGDGVTDDIRAFEKAIES------GFPVYVPYGTFMVSRGIKLP----S-NTVLTGAGKRNAVIRFMDS 88 (609)
T ss_dssp SSSEEGGGGTCCCEEEEECHHHHHHHHHT------SSCEEECSEEEEESSCEEEC----S-SEEEEESCTTTEEEEECTT
T ss_pred CcEEEeEecccCCCCCchhHHHHHHHHHc------CCEEEECCccEEEeCceEEC----C-CcEEEEeeCCCCEEEeCCC
Confidence 56899999999999999999999999973 3899999999999 899998 6 99999985 6666544
Q ss_pred ccccCCC-cceEEEecccceEEEceeeeCCCCcccccccCCCCCCCCceeEEEEccCCeEEEeeEEecCcceEEEEecee
Q 043588 105 YRVLGQA-DNWLSFEGVSGVSIIGGALDAKGSSLWACKASGANCPDGATTLRFTNSNNIRINGLLSLNSQMFHIVINGCK 183 (397)
Q Consensus 105 ~~~~~~~-~~~i~~~~~~ni~I~GG~idg~g~~~w~~~~~~~~~~~~~~~i~~~~~~nv~i~~v~i~~~~~~~i~~~~~~ 183 (397)
...|... .+++.+.+.+||+|+|++|||+++.||.... .....||++|.|.+|+|++|++++++++|.+++.+....
T Consensus 89 ~p~~~~li~~lI~a~~~~NItItG~TIDGNG~~~g~~~~--~~g~~RP~lI~f~~c~NV~I~gVti~NSp~~gI~I~~~~ 166 (609)
T 3gq8_A 89 VGRGESLMYNENVTTGNENIFLSSFTLDGNNKRLGQGIS--GIGGSRESNLSIRACHNVYIRDIEAVDCTLHGIDITCGG 166 (609)
T ss_dssp CCSSCCSEEESCTTTCCEEEEEEEEEEECCGGGGCSSCC--CSSTTTTCSEEEESCEEEEEEEEEEESCSSCSEEEECSS
T ss_pred CCCCCceeeeeeeecccccEEEEeeEEECCccccCcccc--cCCCCCccEEEEEeeceEEEEeeEEEeCCCCCeEEeCCC
Confidence 3333211 1234566899999999999999984443211 123478999999999999999999999998655544332
Q ss_pred cEEEEeEEEECCCCCCCCCceeeec------ceeEEEEecEEec-CCceEEeCCCCeeEEEEeeEEec------CceeEE
Q 043588 184 DVHIEGVTVIAPGNSPNTDGIHVQL------STNVKITNCTIKT-GDDCIPIGPGTKNLWIERVTCGP------GHGISI 250 (397)
Q Consensus 184 nv~i~n~~i~~~~~~~~~DGi~~~~------s~nv~I~n~~i~~-~dD~i~i~~~s~nv~i~n~~~~~------~~gi~i 250 (397)
+ | ||+++++ |+||+|+||++++ +||||++++ ++||+|+||+|++ ++|++|
T Consensus 167 ~---------------N-DGid~DGi~fd~~S~NV~I~Nc~I~~tGDDcIaIks-seNI~I~Nc~~~gp~G~S~~~GIsI 229 (609)
T 3gq8_A 167 L---------------D-YPYLGDGTTAPNPSENIWIENCEATGFGDDGITTHH-SQYINILNCYSHDPRLTANCNGFEI 229 (609)
T ss_dssp S---------------S-CCCCCTTCCCSSCCEEEEEESCEEESCSSCSEEECS-CEEEEEESCEEECCSSCSSCCSEEE
T ss_pred C---------------C-ccccCCCccccccceeEEEEeeEEEecCCCEEEecC-CeeEEEEeEEEECCCCCCCcccEEc
Confidence 2 2 5555555 9999999999955 999999988 9999999999953 368999
Q ss_pred eeecccCCcCCEEEEEEEeeEEeCCcceEEEEeecCCCCceEEceEEEEE-EEecCc-ccEEEeeecCCCCCCCCCCccc
Q 043588 251 GSLAKDLIEEGVQNVTVFKTVFTGTTNGFRIKSWARPSNGFVQGVSFIDA-IMRNVQ-FPIVIDQNYCPHNLNCPGQVSG 328 (397)
Q Consensus 251 gs~~~~~~~~~v~nI~i~n~~~~~~~~gi~i~~~~~~~~g~i~ni~~~ni-~~~~~~-~~i~i~~~~~~~~~~~~~~~~~ 328 (397)
++. .+||+|+||++.++.+|++||++. +++.++||+|+|. .++++. +.++....+... ++..
T Consensus 230 Gsg--------s~NVtV~Nc~i~nt~~GIrIKt~~--~~~~v~NV~I~n~vs~~nvrsyn~r~iG~~~a~------dp~s 293 (609)
T 3gq8_A 230 DDG--------SRHVVLSNNRSKGCYGGIEIKAHG--DAPAAYNISINGHMSVEDVRSYNFRHIGHHAAT------APQS 293 (609)
T ss_dssp CTT--------CEEEEEESEEEESSSEEEEEEECT--TSCCCEEEEEEEEEEESCSEEEEEEETTSCSTT------SCCC
T ss_pred cCC--------cccEEEEeeEEECCCCEEEEEecC--CCCccccEEEECCEeecCceEecceEEccccCC------CCCc
Confidence 742 399999999999999999999864 4678999999995 555544 455544443211 1122
Q ss_pred eEEEeEEEEeEEEeeC
Q 043588 329 VKINDITYQDIRGTSA 344 (397)
Q Consensus 329 ~~i~nI~f~ni~~~~~ 344 (397)
.+.+||+++|+....+
T Consensus 294 ~~a~nV~l~n~~~~~p 309 (609)
T 3gq8_A 294 VSAKNIVASNLVSIRP 309 (609)
T ss_dssp SSCEEEEEEEEEEESC
T ss_pred ceecceEeecceEEee
Confidence 3568888888876554
No 14
>1h80_A IOTA-carrageenase; hydrolase, IOTA-carrageenan double helix degradation; 1.6A {Alteromonas SP} SCOP: b.80.1.8 PDB: 1ktw_A* 3lmw_A
Probab=100.00 E-value=1.5e-37 Score=306.35 Aligned_cols=298 Identities=15% Similarity=0.173 Sum_probs=222.5
Q ss_pred ccCceeEE-eeccCccCCCCcchHHHHHHHHHHhhccC-CCcEEEEcCceEEeeceeeeccCCCcceEEEEc--cEEEee
Q 043588 27 YATTTTYN-VLSFGAKGNGVTDSTQAFAKAWDAACTST-ESATINVPKGRYLLGSVAFKGDCKSSDITFRID--GTLVAP 102 (397)
Q Consensus 27 ~~~~~~~~-v~d~GA~~dg~tddt~aiq~Ai~~a~~~~-~g~~v~ip~G~Y~~~~~~l~~~~~s~~~~l~~~--G~l~~~ 102 (397)
......++ |+||||+|||.+|||+|||+||++ |++. ++++|+||+|+|+++++.|+ | +++|+++ ++|+++
T Consensus 16 ~~~~~~~~~V~dfGA~gDG~tDdT~Aiq~Aida-c~~~~ggg~V~vP~GtYl~g~I~lk----s-~v~L~l~~GatL~~s 89 (464)
T 1h80_A 16 TQQDVNYDLVDDFGANGNDTSDDSNALQRAINA-ISRKPNGGTLLIPNGTYHFLGIQMK----S-NVHIRVESDVIIKPT 89 (464)
T ss_dssp SCCSEEEEHHHHHCCCTTSSSBCHHHHHHHHHH-HHTSTTCEEEEECSSEEEECSEECC----T-TEEEEECTTCEEEEC
T ss_pred CCCcceeeehhccCcCCCCCchhHHHHHHHHHH-HhhccCCcEEEECCCeEEEeeEecc----C-ceEEEEcCCcEEEec
Confidence 33456788 999999999999999999999975 5665 79999999999999999998 7 9999998 488877
Q ss_pred cc--ccccCCCcceEEE---ecccceEEEc-e---eeeCCCCcccccccCCCCCCCCceeEEEEccCCeEEEeeEEecCc
Q 043588 103 AD--YRVLGQADNWLSF---EGVSGVSIIG-G---ALDAKGSSLWACKASGANCPDGATTLRFTNSNNIRINGLLSLNSQ 173 (397)
Q Consensus 103 ~~--~~~~~~~~~~i~~---~~~~ni~I~G-G---~idg~g~~~w~~~~~~~~~~~~~~~i~~~~~~nv~i~~v~i~~~~ 173 (397)
.+ ...|+ ++.+ .+++|++|.| | +|||+|.. ..+|+++.+.+|+|++|+++++++.
T Consensus 90 ~~td~~~y~----~~~~~~~~~~~nItI~G~Gg~~~iDG~G~~-----------~~rp~~i~~~~~~Nv~I~gIti~n~- 153 (464)
T 1h80_A 90 WNGDGKNHR----LFEVGVNNIVRNFSFQGLGNGFLVDFKDSR-----------DKNLAVFKLGDVRNYKISNFTIDDN- 153 (464)
T ss_dssp CCTTCSCEE----EEEESSSSCEEEEEEEECTTCEEEECTTCS-----------CCBEEEEEECSEEEEEEEEEEEECC-
T ss_pred cCCCcccCC----ceEeecccCccceEEECcCcceEEeCCCCC-----------CCCceEEEEEeeccEEEeeeEEecc-
Confidence 53 44443 3333 6789999999 8 88888752 3478899999999999999999994
Q ss_pred ceEEEEeceecEEEEeEEEECCCCCCCCCceeeecceeEEEEecEEecCCceEE--eCCCCeeEEEEeeEEecCceeEEe
Q 043588 174 MFHIVINGCKDVHIEGVTVIAPGNSPNTDGIHVQLSTNVKITNCTIKTGDDCIP--IGPGTKNLWIERVTCGPGHGISIG 251 (397)
Q Consensus 174 ~~~i~~~~~~nv~i~n~~i~~~~~~~~~DGi~~~~s~nv~I~n~~i~~~dD~i~--i~~~s~nv~i~n~~~~~~~gi~ig 251 (397)
|.++ .+.++.+ .++||+++ .|+||+|+||+|.++||++. ...+++||+|+||+|.+++|++|+
T Consensus 154 -w~ih--~s~~V~i-----------~NtDGi~i-~s~nV~I~n~~I~~gddgiGs~~~~~~~NV~V~n~~~~gg~GIrIk 218 (464)
T 1h80_A 154 -KTIF--ASILVDV-----------TERNGRLH-WSRNGIIERIKQNNALFGYGLIQTYGADNILFRNLHSEGGIALRME 218 (464)
T ss_dssp -SCBS--CSEEECE-----------EEETTEEE-EEEEEEEEEEEEESCCTTCEEEEESEEEEEEEEEEEEESSEEEEEE
T ss_pred -ceEe--eceeeee-----------ecCCCcee-eccCEEEeceEEecCCCeEEecccCCEeEEEEEeeEEECCCEEEEE
Confidence 4432 3333322 25799998 88999999999999998774 233589999999999998889997
Q ss_pred eec----ccCCcCCEEEEEEEeeEEeCCcceEEEEeecCCCCceEEceEEEEEEEecCcccEEEeeecCCCCCCCCCCcc
Q 043588 252 SLA----KDLIEEGVQNVTVFKTVFTGTTNGFRIKSWARPSNGFVQGVSFIDAIMRNVQFPIVIDQNYCPHNLNCPGQVS 327 (397)
Q Consensus 252 s~~----~~~~~~~v~nI~i~n~~~~~~~~gi~i~~~~~~~~g~i~ni~~~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~ 327 (397)
+.+ .. ..+.++||+|+||+|.+...++.|++ ..+.++||+|+|++++++..++.+.+.|++... ..
T Consensus 219 tg~d~IG~~-~~g~v~NI~~~Ni~~~nv~~~I~I~p----~~~~isnItfeNI~~t~~~~aI~i~q~y~~~fd-----~~ 288 (464)
T 1h80_A 219 TDNLLMKNY-KQGGIRNIFADNIRCSKGLAAVMFGP----HFMKNGDVQVTNVSSVSCGSAVRSDSGFVELFS-----PT 288 (464)
T ss_dssp CCCHHHHHH-TCCEEEEEEEEEEEEESSSEEEEEEC----TTCBCCCEEEEEEEEESSSCSEEECCCCCEECC-------
T ss_pred eCCceeccC-CCCcEEEEEEEeEEEECCceeEEEeC----CCceEeEEEEEEEEEEccceeEEEecCcccccC-----cc
Confidence 641 11 24679999999999999999999984 235789999999999999999999998876422 12
Q ss_pred ceEEEeEEEEeEE------Eee---------CCCceEEEeec-------------CCCceecEEEEeEEEEe
Q 043588 328 GVKINDITYQDIR------GTS---------ATPIAIKFDCS-------------TKYPCQGIKLQNINLRH 371 (397)
Q Consensus 328 ~~~i~nI~f~ni~------~~~---------~~~~~~~i~~~-------------~~~~i~ni~~~ni~i~~ 371 (397)
.....+.+|.|.. ++. ....++++.|. +....++++++||++..
T Consensus 289 ~~~~~~~~~~~~~e~~~~~G~~~~~~~~~ng~~~~~~~i~~~~~~~~~~~~~~~~~~g~~~~~~~~nv~~~~ 360 (464)
T 1h80_A 289 DEVHTRQSWKQAVESKLGRGCAQTPYARGNGGTRWAARVTQKDACLDKAKLEYGIEPGSFGTVKVFDVTARF 360 (464)
T ss_dssp -------------------CCBCCC----------CEEBCSCHHHHHHHHHHTCCCCCBCSSEEEEEEEEEC
T ss_pred ccccccceeccccccccccCceeEEEeccCCcccCceEEccccceeccccccccccCCceEEEEEEEEEecc
Confidence 2256677776655 111 11346666664 55678899999999876
No 15
>1ogo_X Dextranase; hydrolase, dextran degradation, glycosidase; HET: BGC GLC; 1.65A {Penicillium minioluteum} SCOP: b.133.1.1 b.80.1.10 PDB: 1ogm_X*
Probab=100.00 E-value=8.9e-38 Score=314.62 Aligned_cols=266 Identities=12% Similarity=0.122 Sum_probs=214.2
Q ss_pred CCCcEEEEcCceEEe-------------eceeeeccCCCcceE-EEEc-c-EEEeeccccccCCCcceEEEecccceEEE
Q 043588 63 TESATINVPKGRYLL-------------GSVAFKGDCKSSDIT-FRID-G-TLVAPADYRVLGQADNWLSFEGVSGVSII 126 (397)
Q Consensus 63 ~~g~~v~ip~G~Y~~-------------~~~~l~~~~~s~~~~-l~~~-G-~l~~~~~~~~~~~~~~~i~~~~~~ni~I~ 126 (397)
.+|++||||||+|++ +++.|+ | +++ |+++ | +|++ ++.+.+++|++|.
T Consensus 229 ~ggg~v~vP~G~yl~~~~~~~gpc~~g~G~i~lk----S-nvt~L~L~~GA~l~g------------~i~~~~~~nv~It 291 (574)
T 1ogo_X 229 GAKSILYFPPGVYWMNQDQSGNSGKLGSNHIRLN----S-NTYWVYLAPGAYVKG------------AIEYFTKQNFYAT 291 (574)
T ss_dssp CSSSEEEECSEEEEECBCTTCCBSCSSSCCEECC----T-TCCEEEECTTEEEES------------CEEECCSSCEEEE
T ss_pred CCCCEEEECCcEEEEeccccCCcccccceEEEec----C-CCceEEecCCcEEEc------------cEEEeCceeEEEE
Confidence 578999999999999 468887 7 998 9998 6 4442 3778889999999
Q ss_pred c-eeeeCCCCcccccccCC-CCCCCCceeEEEE------ccCCeEEEeeEEecCcceEEEEeceecE--EEEeEEEECCC
Q 043588 127 G-GALDAKGSSLWACKASG-ANCPDGATTLRFT------NSNNIRINGLLSLNSQMFHIVINGCKDV--HIEGVTVIAPG 196 (397)
Q Consensus 127 G-G~idg~g~~~w~~~~~~-~~~~~~~~~i~~~------~~~nv~i~~v~i~~~~~~~i~~~~~~nv--~i~n~~i~~~~ 196 (397)
| |+|||+|+.||...... .....||.++.+. +|+|++|+|++++|+|.|++++..|+|+ +|+|+++.++.
T Consensus 292 G~GtIDG~G~~ww~~~~~~~~~~~~rp~~i~~~~~~~~~~c~NV~I~Giti~NSp~w~i~~~~c~nV~~~I~nv~i~~~~ 371 (574)
T 1ogo_X 292 GHGILSGENYVYQANAGDNYIAVKSDSTSLRMWWHNNLGGGQTWYCVGPTINAPPFNTMDFNGNSGISSQISDYKQVGAF 371 (574)
T ss_dssp SSCEEECTTSCTTCBTTTTTBSCCCTTTBCCSEEECSCCSSEEEEEESCEEECCSSCSEEECSSSCEEEEEEEEEEECCC
T ss_pred eCEEEeCCCcccccccccccccccCCcceEEEEeccccCCceeEEEECeEEECCCCcEEeecCCCChhhEEEeeEeeCCC
Confidence 9 99999999999643221 1223477788887 9999999999999999999999999999 99999998743
Q ss_pred CCCCCCceeeecceeEEEEecEEecCCceEEeCCCCeeEEEEeeEEecC--ce-eEEeeecccCCcCCEEEEEEEeeEEe
Q 043588 197 NSPNTDGIHVQLSTNVKITNCTIKTGDDCIPIGPGTKNLWIERVTCGPG--HG-ISIGSLAKDLIEEGVQNVTVFKTVFT 273 (397)
Q Consensus 197 ~~~~~DGi~~~~s~nv~I~n~~i~~~dD~i~i~~~s~nv~i~n~~~~~~--~g-i~igs~~~~~~~~~v~nI~i~n~~~~ 273 (397)
..++|||++. +||+|+||+|.++||||++++ +||+|+||+++.+ ++ ++||+. .+.++||+|+||+|.
T Consensus 372 -~~nTDGIDi~--~NV~I~nc~I~~gDDcIaIks--~NI~I~nc~i~~g~g~g~IsIGS~-----~g~V~NV~v~N~~i~ 441 (574)
T 1ogo_X 372 -FFQTDGPEIY--PNSVVHDVFWHVNDDAIKIYY--SGASVSRATIWKCHNDPIIQMGWT-----SRDISGVTIDTLNVI 441 (574)
T ss_dssp -STTCCCCBCC--TTCEEEEEEEEESSCSEECCS--TTCEEEEEEEEECSSSCSEECCSS-----CCCEEEEEEEEEEEE
T ss_pred -CCCCccCccc--CCEEEEeeEEECCCCEEEECC--ccEEEEeEEEECCCCCceEEEcCC-----CCcEEEEEEEeEEEE
Confidence 2469999998 999999999999999999997 9999999998865 56 899883 578999999999998
Q ss_pred CCcc--------eEEEEeec--------CCCCceEEceEEEEEEEecCcccEEEeeecCCCCCCCCCCccceEEEeEEEE
Q 043588 274 GTTN--------GFRIKSWA--------RPSNGFVQGVSFIDAIMRNVQFPIVIDQNYCPHNLNCPGQVSGVKINDITYQ 337 (397)
Q Consensus 274 ~~~~--------gi~i~~~~--------~~~~g~i~ni~~~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~i~nI~f~ 337 (397)
++.. +..+++.. ....+ | ||+|+|++++++..++ +... +..+|+||+|+
T Consensus 442 ~~~~~~~~~~~~g~iiGs~~~y~~~~~~~~g~g-V-NI~f~NI~~~~v~~~i-i~i~------------p~~~I~nI~~~ 506 (574)
T 1ogo_X 442 HTRYIKSETVVPSAIIGASPFYASGMSPDSRKS-I-SMTVSNVVCEGLCPSL-FRIT------------PLQNYKNFVVK 506 (574)
T ss_dssp ECCCSSCCTTTTCEEEEECCCSSSSCCCEEEEE-E-EEEEEEEEECSSBCEE-EEEC------------CSEEEEEEEEE
T ss_pred CCcccceeccccceeeccccccccccccCCCce-E-EEEEEeEEEEceeEee-EEEC------------CCCCEEEEEEE
Confidence 8643 33322210 00234 8 9999999999998885 4321 23479999999
Q ss_pred eEEEee------CCCceEEEeecCCCceecEEEEeEEEEe
Q 043588 338 DIRGTS------ATPIAIKFDCSTKYPCQGIKLQNINLRH 371 (397)
Q Consensus 338 ni~~~~------~~~~~~~i~~~~~~~i~ni~~~ni~i~~ 371 (397)
||+++. ....+..+.|.+ .+|+||+|+||++..
T Consensus 507 NI~i~g~~~~~~~~~~~~~i~G~~-~~v~nI~~~NV~i~g 545 (574)
T 1ogo_X 507 NVAFPDGLQTNSIGTGESIIPAAS-GLTMGLAISAWTIGG 545 (574)
T ss_dssp EEEETTCBCCSTTCTTCEEECCCT-TCCEEEEEEEEEETT
T ss_pred eEEEeCccccccccccceeEecCC-CccceEEEEeEEEeC
Confidence 999775 223345566777 899999999999963
No 16
>3gqn_A Preneck appendage protein; beta helix, beta barrel, ATP binding, viral protein; HET: ATP; 2.15A {Bacillus phage PHI29} PDB: 3suc_A*
Probab=100.00 E-value=1.2e-37 Score=315.18 Aligned_cols=269 Identities=19% Similarity=0.211 Sum_probs=204.2
Q ss_pred ceeEEeeccCccCCCCcchHHHHHHHHHHhhccCCCcEEEEcCceEEe-eceeeeccCCCcceEEEEcc----EEEeecc
Q 043588 30 TTTYNVLSFGAKGNGVTDSTQAFAKAWDAACTSTESATINVPKGRYLL-GSVAFKGDCKSSDITFRIDG----TLVAPAD 104 (397)
Q Consensus 30 ~~~~~v~d~GA~~dg~tddt~aiq~Ai~~a~~~~~g~~v~ip~G~Y~~-~~~~l~~~~~s~~~~l~~~G----~l~~~~~ 104 (397)
+..++|+||||+|||.+|||+|||+||++ |++|+||+|+|++ ++|.|+ + +++|.+++ +|+++.+
T Consensus 20 ~~~~nV~dfGA~gDG~tDdT~Aiq~Ai~a------Gg~V~IPaGtYlisg~I~L~----s-nv~L~Geg~~~t~Lk~~~d 88 (772)
T 3gqn_A 20 QFGVSVKTYGAKGDGVTDDIRAFEKAIES------GFPVYVPYGTFMVSRGIKLP----S-NTVLTGAGKRNAVIRFMDS 88 (772)
T ss_dssp SSSEESGGGTCCCEEEEECHHHHHHHHHT------TSCEEECSEEEEESSCEEEC----S-SCEEEEEEEEEEEEEECTT
T ss_pred CcEEEeEecccCCCCChhHHHHHHHHHHc------CCEEEECCccEEEEeEEEEC----C-CcEEEEecCCCCEEEeCCC
Confidence 56899999999999999999999999973 3899999999999 899998 6 89999875 5666544
Q ss_pred ccccCCC-cceEEEecccceEEEceeeeCCCCcccccccCCCCCCCCceeEEEEccCCeEEEeeEEecCcceEEEEecee
Q 043588 105 YRVLGQA-DNWLSFEGVSGVSIIGGALDAKGSSLWACKASGANCPDGATTLRFTNSNNIRINGLLSLNSQMFHIVINGCK 183 (397)
Q Consensus 105 ~~~~~~~-~~~i~~~~~~ni~I~GG~idg~g~~~w~~~~~~~~~~~~~~~i~~~~~~nv~i~~v~i~~~~~~~i~~~~~~ 183 (397)
...|... .+++.+.+++||+|+|++|||+|+.+|.... .....||++|.|.+|+|++|++++++++|.+++.+
T Consensus 89 ~p~~~~li~~lI~a~gveNItItG~TIDGNG~~~g~~~~--~~g~~RP~lI~f~~ckNV~I~gVti~NSp~~gI~I---- 162 (772)
T 3gqn_A 89 VGRGESLMYNENVTTGNENIFLSSFTLDGNNKRLGQGIS--GIGGSRESNLSIRACHNVYIRDIEAVDCTLHGIDI---- 162 (772)
T ss_dssp CCSSCCSEEESCTTTCCEEEEEEEEEEECCGGGGCSSCC--CSSTTTTCSEEEESCEEEEEEEEEEESCSSCSEEE----
T ss_pred CCCCCceeeeeeeccCceeEEEEeeEEeCCccccCcccc--cCCCCCccEEEEEeeceEEEEeEEEEeCCCCCEEE----
Confidence 3333211 1234567899999999999999984433111 22347899999999999999999999999865444
Q ss_pred cEEEEeEEEECCCCCCCCCceeeec------ceeEEEEecEEec-CCceEEeCCCCeeEEEEeeEEec------CceeEE
Q 043588 184 DVHIEGVTVIAPGNSPNTDGIHVQL------STNVKITNCTIKT-GDDCIPIGPGTKNLWIERVTCGP------GHGISI 250 (397)
Q Consensus 184 nv~i~n~~i~~~~~~~~~DGi~~~~------s~nv~I~n~~i~~-~dD~i~i~~~s~nv~i~n~~~~~------~~gi~i 250 (397)
.++.+ | ||+++++ |+||+|+||+|++ +||||++++ ++||+|+||+|.+ ++|++|
T Consensus 163 ---------~np~~--N-DGid~DGi~fdi~S~NV~I~Nc~I~ntGDDcIAIks-SeNI~I~Nc~c~gphG~S~~~GIsI 229 (772)
T 3gqn_A 163 ---------TCGGL--D-YPYLGDGTTAPNPSENIWIENCEATGFGDDGITTHH-SQYINILNCYSHDPRLTANCNGFEI 229 (772)
T ss_dssp ---------ECSSS--S-CCCCCTTCCCSSCCEEEEEESCEEESCSSCSEEECS-CEEEEEESCEEECCSSSSSCCSEEE
T ss_pred ---------eCCCc--C-CcCCCcCcccccccceEEEEeeEEEecCcCeEEecC-CceEEEEeEEEECCCCCCCcccEEe
Confidence 33322 2 5555555 9999999999965 999999987 9999999999953 368999
Q ss_pred eeecccCCcCCEEEEEEEeeEEeCCcceEEEEeecCCCCceEEceEEEE-EEEecCc-ccEEEeeecCCCCCCCCCCccc
Q 043588 251 GSLAKDLIEEGVQNVTVFKTVFTGTTNGFRIKSWARPSNGFVQGVSFID-AIMRNVQ-FPIVIDQNYCPHNLNCPGQVSG 328 (397)
Q Consensus 251 gs~~~~~~~~~v~nI~i~n~~~~~~~~gi~i~~~~~~~~g~i~ni~~~n-i~~~~~~-~~i~i~~~~~~~~~~~~~~~~~ 328 (397)
++. .+||+|+||++.++.+|++||++. +++.++||+|.+ +.+++.. +.++....+.. .++..
T Consensus 230 Gsg--------s~NVtV~Nc~~~nT~nGIRIKt~~--~gg~v~NV~I~gnis~~dvrsynir~iG~h~a------~dp~s 293 (772)
T 3gqn_A 230 DDG--------SRHVVLSNNRSKGCYGGIEIKAHG--DAPAAYNISINGHMSVEDVRSYNFRHIGHHAA------TAPQS 293 (772)
T ss_dssp CTT--------CEEEEEEEEEEESSSEEEEECCCT--TSCCCEEEEEEEEEEESCSEEEEECCTTSCSS------SSCCC
T ss_pred cCC--------cccEEEEceEEECCCcEEEEEEeC--CCCccccEEEECCEEeccCeEecceEEccccC------CCCCC
Confidence 742 399999999999999999999763 567899999985 7666654 34443333221 11122
Q ss_pred eEEEeEEEEeEEEeeC
Q 043588 329 VKINDITYQDIRGTSA 344 (397)
Q Consensus 329 ~~i~nI~f~ni~~~~~ 344 (397)
.+..||.++|+.....
T Consensus 294 ~~a~nV~l~n~~~~~P 309 (772)
T 3gqn_A 294 VSAKNIVASNLVSIRP 309 (772)
T ss_dssp SSCEEEEEEEEEEESC
T ss_pred ccCccEEeecceEEcc
Confidence 3568888888876553
No 17
>2pyg_A Poly(beta-D-mannuronate) C5 epimerase 4; beta-helix, isomerase; 2.10A {Azotobacter vinelandii} PDB: 2pyh_A*
Probab=99.97 E-value=4.2e-29 Score=243.83 Aligned_cols=190 Identities=17% Similarity=0.217 Sum_probs=134.7
Q ss_pred eEEeeccCccCCCCcchHHHHHHHHHHhhccCCCcEEEEcCceEEee--------ceeeeccCCCcceEEEEcc----EE
Q 043588 32 TYNVLSFGAKGNGVTDSTQAFAKAWDAACTSTESATINVPKGRYLLG--------SVAFKGDCKSSDITFRIDG----TL 99 (397)
Q Consensus 32 ~~~v~d~GA~~dg~tddt~aiq~Ai~~a~~~~~g~~v~ip~G~Y~~~--------~~~l~~~~~s~~~~l~~~G----~l 99 (397)
.++|+||||+|||.+|||+|||+||++|| +.+|++|+||||+|++. ++.++ | +++|+++| +|
T Consensus 2 ~~~v~~~ga~~dg~~ddt~aiq~Ai~~a~-~~gg~~v~~p~G~y~~~~~~~~~~g~l~~~----~-~v~l~g~g~~~t~l 75 (377)
T 2pyg_A 2 DYNVKDFGALGDGVSDDRASIQAAIDAAY-AAGGGTVYLPAGEYRVSAAGEPGDGCLMLK----D-GVYLAGAGMGETVI 75 (377)
T ss_dssp CEEGGGGTCCCEEEEECHHHHHHHHHHHH-HTTSEEEEECSEEEEECCCSSGGGCSEECC----T-TEEEEESSBTTEEE
T ss_pred EeeeeecCCCCCCCcchHHHHHHHHHHHH-hcCCCEEEECCeEEEEcccccCCcccEEec----C-CeEEEEcCCCCcEE
Confidence 57999999999999999999999999874 45789999999999984 68877 7 99999985 44
Q ss_pred EeeccccccCCC------cceEEEecccceEEEc------eeeeCCCCcccccccCCCCCCCCceeEEEEccCCeEEEee
Q 043588 100 VAPADYRVLGQA------DNWLSFEGVSGVSIIG------GALDAKGSSLWACKASGANCPDGATTLRFTNSNNIRINGL 167 (397)
Q Consensus 100 ~~~~~~~~~~~~------~~~i~~~~~~ni~I~G------G~idg~g~~~w~~~~~~~~~~~~~~~i~~~~~~nv~i~~v 167 (397)
++......++.. +.-....+.++++|.| |+++| ||.....+ .+..|++++|+++
T Consensus 76 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~I~G~~~~~~G~idG----w~~~~~~~----------~~~~~~nv~I~~~ 141 (377)
T 2pyg_A 76 KLIDGSDQKITGMVRSAYGEETSNFGMRDLTLDGNRDNTSGKVDG----WFNGYIPG----------GDGADRDVTIERV 141 (377)
T ss_dssp EECTTCBSCEEEEEECCTTSCCEEEEEEEEEEECCGGGCBSCEEE----EEECSCTT----------SSCCEEEEEEEEE
T ss_pred EecCCCccCccceEeccCCCcceEEEEEEEEEECCCccCCccccc----eecccCcc----------ccccccceEEEeE
Confidence 554333222110 0001233578888888 45655 77643210 1246899999999
Q ss_pred EEecCcceEEEEecee-cEEEEeEEEECCCCCCCCCceeeecceeEEEEecE-EecCCceEEeCCCCeeEEEEeeEEecC
Q 043588 168 LSLNSQMFHIVINGCK-DVHIEGVTVIAPGNSPNTDGIHVQLSTNVKITNCT-IKTGDDCIPIGPGTKNLWIERVTCGPG 245 (397)
Q Consensus 168 ~i~~~~~~~i~~~~~~-nv~i~n~~i~~~~~~~~~DGi~~~~s~nv~I~n~~-i~~~dD~i~i~~~s~nv~i~n~~~~~~ 245 (397)
++++++.|++++..|. +++++|+.+.. ...|||.+..|++++|++|+ +...+|||.+..++++++|+||++...
T Consensus 142 ~i~n~~~~gi~~~~~~~~~~i~n~~~~~----~~~dGI~~~~s~~~~i~~N~~~~~~~~GI~~~~~s~~v~I~nN~i~~~ 217 (377)
T 2pyg_A 142 EVREMSGYGFDPHEQTINLTIRDSVAHD----NGLDGFVADYLVDSVFENNVAYANDRHGFNVVTSTHDFVMTNNVAYGN 217 (377)
T ss_dssp EEECCSSCSEEECSSEEEEEEESCEEES----CSSCSEEEESEEEEEEESCEEESCSSCSEEEETTCEEEEEESCEEESC
T ss_pred EEEecccceEEeecccCCeEEEeEEeec----CCCCceeEeccCCcEEECcEEEccccCcEEEEeccCCeEEECCEEECc
Confidence 9999999999998764 78888888865 34566666666666666663 333566666555566666666666543
No 18
>2vbk_A Tailspike-protein; viral adhesion protein, viral protein, hydrolase, endorhamnosidase, right-handed parallel beta-helix; 1.25A {Enterobacteria phage SF6} PDB: 2vbe_A 2vbm_A*
Probab=99.97 E-value=6.3e-31 Score=248.20 Aligned_cols=206 Identities=17% Similarity=0.263 Sum_probs=160.7
Q ss_pred eeEEeeccCccCCCCcchHHHHHHHHHHhhccCCCcEEEEcCc----eEEee-ceeeeccCCCcceEEEEcc--EEEeec
Q 043588 31 TTYNVLSFGAKGNGVTDSTQAFAKAWDAACTSTESATINVPKG----RYLLG-SVAFKGDCKSSDITFRIDG--TLVAPA 103 (397)
Q Consensus 31 ~~~~v~d~GA~~dg~tddt~aiq~Ai~~a~~~~~g~~v~ip~G----~Y~~~-~~~l~~~~~s~~~~l~~~G--~l~~~~ 103 (397)
..++|+||||+|||.+|||+|||+||++||+..+|++||||+| +|+++ ++.|+ + +++|.+++ ++.+..
T Consensus 50 ~~~NVkDFGAkGDGvTDDTaAIQkAIdaA~a~~GGGtVyVPaG~~~~tYlvt~tI~Lk----S-nV~L~Ge~~AtIl~s~ 124 (514)
T 2vbk_A 50 EAISILDFGVIDDGVTDNYQAIQNAIDAVASLPSGGELFIPASNQAVGYIVGSTLLIP----G-GVNIRGVGKASQLRAK 124 (514)
T ss_dssp TCCBGGGGCCCCSSSSCCHHHHHHHHHHHHTSTTCEEEECCCCSSTTCEEESSCEEEC----T-TEEEECCSTTSEEEEC
T ss_pred cEEEeeccCcCCCCCcccHHHHHHHHHHHhhcCCCeEEEECCCCcceeEEECCeEEec----C-CeEEEEecCceEeecc
Confidence 4789999999999999999999999998877668999999999 99885 68887 7 99999984 444322
Q ss_pred cc-------cccCCCcceEEEecccceEEEc-eeeeCCCCcccccccCCCCCCCCceeEEEEccCCeEEEeeEE--ecCc
Q 043588 104 DY-------RVLGQADNWLSFEGVSGVSIIG-GALDAKGSSLWACKASGANCPDGATTLRFTNSNNIRINGLLS--LNSQ 173 (397)
Q Consensus 104 ~~-------~~~~~~~~~i~~~~~~ni~I~G-G~idg~g~~~w~~~~~~~~~~~~~~~i~~~~~~nv~i~~v~i--~~~~ 173 (397)
.. ..| .+++.+.+++|+.|.| |++||++..|+... ....++..+ .+++|.+++++. ..++
T Consensus 125 ~~I~GtIia~~y---~s~I~~~~VeNIaITG~GTIDG~g~n~t~e~----~~~Rq~~~~---~fdnV~Vn~Vt~~v~~Sg 194 (514)
T 2vbk_A 125 SGLTGSVLRLSY---DSDTIGRYLRNIRVTGNNTCNGIDTNITAED----SVIRQVYGW---VFDNVMVNEVETAYLMQG 194 (514)
T ss_dssp TTCCSEEEEECC---CSCCSCEEEESCEEECCSSSEEEEESCCTTC----SSCCCEESE---EEESCEEEEEEEEEEEES
T ss_pred ccccccEEeccC---CccccccCceEEEEECCCeEeCCCCCccccc----eeeeccceE---EeeeEEEEeEEEeEeccC
Confidence 11 011 2345667789999999 99999876542210 011122223 367999999965 4688
Q ss_pred ceEEEEeceecEEEE-eEEEECCCCCCCCCceeeecceeEEEEecEEecCCceEEeCCC-----------CeeEEEEeeE
Q 043588 174 MFHIVINGCKDVHIE-GVTVIAPGNSPNTDGIHVQLSTNVKITNCTIKTGDDCIPIGPG-----------TKNLWIERVT 241 (397)
Q Consensus 174 ~~~i~~~~~~nv~i~-n~~i~~~~~~~~~DGi~~~~s~nv~I~n~~i~~~dD~i~i~~~-----------s~nv~i~n~~ 241 (397)
.|++++..|++++++ ++++. .+|+||.|.||+|..|||||++++| ++|+.
T Consensus 195 ~WTIhPi~Cqnvt~r~gL~f~-------------eSCrNV~IsnC~FsVGDdciaiksGk~~~~~~~~~~se~~~----- 256 (514)
T 2vbk_A 195 LWHSKFIACQAGTCRVGLHFL-------------GQCVSVSVSSCHFSRGNYSADESFGIRIQPQTYAWSSEAVR----- 256 (514)
T ss_dssp EEEEEEESCEEEEEEEEEEEE-------------SCCEEEEEESCEEECTTSCCTTCEEEEEECBCCTTTSSCBC-----
T ss_pred cEEEeEeccCceecccCcccc-------------CCCCeEEEeccEEecCcceeeeecCceecccccCCcchhcc-----
Confidence 999999999999988 55554 2799999999999999999999985 56666
Q ss_pred EecCce-eEEeeecccCCcCCEEE-EEEEeeEEeCCc
Q 043588 242 CGPGHG-ISIGSLAKDLIEEGVQN-VTVFKTVFTGTT 276 (397)
Q Consensus 242 ~~~~~g-i~igs~~~~~~~~~v~n-I~i~n~~~~~~~ 276 (397)
|| +.+||+. +.++++| +++++|.|.+++
T Consensus 257 ----hgav~igSE~---m~~Gvk~~v~v~~Clf~~td 286 (514)
T 2vbk_A 257 ----SEAIILDSET---MCIGFKNAVYVHDCLDLHME 286 (514)
T ss_dssp ----CEEEEEESSE---EEESCSEEEEESCCEEEEEE
T ss_pred ----cccEEECchh---hcccccccEEEEeeeccCCc
Confidence 66 8899873 3568999 999999999874
No 19
>3jur_A EXO-poly-alpha-D-galacturonosidase; beta-helix, cell WALL biogenesis/degradation, glycosidase; 2.05A {Thermotoga maritima}
Probab=99.93 E-value=2e-24 Score=213.12 Aligned_cols=227 Identities=13% Similarity=0.182 Sum_probs=178.4
Q ss_pred ceEEEecccceEEEc-eeeeCCCCcccccccCCCCCCCCceeEEEEccCCeEEEeeEEecC--cceEEEEeceecEEEEe
Q 043588 113 NWLSFEGVSGVSIIG-GALDAKGSSLWACKASGANCPDGATTLRFTNSNNIRINGLLSLNS--QMFHIVINGCKDVHIEG 189 (397)
Q Consensus 113 ~~i~~~~~~ni~I~G-G~idg~g~~~w~~~~~~~~~~~~~~~i~~~~~~nv~i~~v~i~~~--~~~~i~~~~~~nv~i~n 189 (397)
.++.+.+++|++|+| ...+. +.| .+++.+|+|++|+++++.++ ..++|++..|+||+|+|
T Consensus 191 ~~i~~~~~~nv~i~giti~ns---p~~--------------~i~~~~~~nv~i~~v~I~~~~~NtDGidi~~s~nV~I~n 253 (448)
T 3jur_A 191 SFVQFYRCRNVLVEGVKIINS---PMW--------------CIHPVLSENVIIRNIEISSTGPNNDGIDPESCKYMLIEK 253 (448)
T ss_dssp CSEEEESCEEEEEESCEEESC---SSC--------------SEEEESCEEEEEESCEEEECSTTCCSBCCBSCEEEEEES
T ss_pred eEEEEEcccceEEEeeEEEeC---CCc--------------eEeeeccCCEEEEeEEEeeccCCCccccccCCcCEEEEe
Confidence 478999999999999 44432 233 48999999999999999985 35789999999999999
Q ss_pred EEEECCCC------CCCCCceeeec-ceeEEEEecEEe--cCCceEEeCCC----CeeEEEEeeEEecC-ceeEEeeecc
Q 043588 190 VTVIAPGN------SPNTDGIHVQL-STNVKITNCTIK--TGDDCIPIGPG----TKNLWIERVTCGPG-HGISIGSLAK 255 (397)
Q Consensus 190 ~~i~~~~~------~~~~DGi~~~~-s~nv~I~n~~i~--~~dD~i~i~~~----s~nv~i~n~~~~~~-~gi~igs~~~ 255 (397)
++|.+.+| +.+.||+.+.. |+||+|+||+++ .+++||++++. .+||+|+||++.++ +|++|++...
T Consensus 254 ~~i~~gDDcIaiksg~~~dg~~~~~ps~nI~I~n~~~~~~~gh~gisiGS~~~~~v~nV~v~n~~~~~t~~GirIKt~~g 333 (448)
T 3jur_A 254 CRFDTGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVISQASHGGLVIGSEMSGGVRNVVARNNVYMNVERALRLKTNSR 333 (448)
T ss_dssp CEEEESSEEEEEBCCCHHHHHHHCCCEEEEEEESCEEECSSCSEEEEECSSCTTCEEEEEEESCEEESCSEEEEEECCTT
T ss_pred eEEEeCCCcEEeccCccccccccCCCceeEEEEEeEEecCCCcceEEECCcccCcEEEEEEEEEEEecccceEEEEEEcC
Confidence 99998543 11223333322 799999999994 46679999874 59999999999876 7999998643
Q ss_pred cCCcCCEEEEEEEeeEEeCCcceE-EEEeecC----CCCceEEceEEEEEEEecCcccEEEeeecCCCCCCCCCCccceE
Q 043588 256 DLIEEGVQNVTVFKTVFTGTTNGF-RIKSWAR----PSNGFVQGVSFIDAIMRNVQFPIVIDQNYCPHNLNCPGQVSGVK 330 (397)
Q Consensus 256 ~~~~~~v~nI~i~n~~~~~~~~gi-~i~~~~~----~~~g~i~ni~~~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~ 330 (397)
+ .+.++||+|+|++|.+..+++ .|...+. ...+.++||+|+|++.++...++.+... +..+
T Consensus 334 ~--gG~v~nI~f~ni~m~~v~~~~i~I~~~Y~~~~~~~~~~i~nI~~~NI~~t~~~~~i~i~g~------------~~~p 399 (448)
T 3jur_A 334 R--GGYMENIFFIDNVAVNVSEEVIRINLRYDNEEGEYLPVVRSVFVKNLKATGGKYAVRIEGL------------ENDY 399 (448)
T ss_dssp T--CSEEEEEEEESCEEEEESSEEEEEESCGGGCCCSCCCEEEEEEEESCEEEECSEEEEEECB------------TTBC
T ss_pred C--CceEeeEEEEEEEEECCccccEEEEeeccCCCCCCCceEEEEEEEeEEEEecceEEEEEeC------------CCCC
Confidence 3 367999999999999988887 8876542 1356899999999999987788888532 2348
Q ss_pred EEeEEEEeEEEeeCCCceEEEee----cCCCceecEEEEeEEEEe
Q 043588 331 INDITYQDIRGTSATPIAIKFDC----STKYPCQGIKLQNINLRH 371 (397)
Q Consensus 331 i~nI~f~ni~~~~~~~~~~~i~~----~~~~~i~ni~~~ni~i~~ 371 (397)
++||+|+||+++..+. +..+.. .....++|++|+||+|..
T Consensus 400 ~~~I~~~nv~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~nv~ing 443 (448)
T 3jur_A 400 VKDILISDTIIEGAKI-SVLLEFGQLGMENVIMNGSRFEKLYIEG 443 (448)
T ss_dssp EEEEEEEEEEEESCSE-EEEEEEEEEEEEEEEETTEEEEEEEEEE
T ss_pred EeeEEEEEEEEEcccc-ceeEeccccccccceecccEEEEEEEcC
Confidence 9999999999997653 344432 345579999999999984
No 20
>3eqn_A Glucan 1,3-beta-glucosidase; tandem beta-helix domains, glycosidase, hydrolase; HET: NAG BMA; 1.70A {Phanerochaete chrysosporium} PDB: 3eqo_A*
Probab=99.91 E-value=1.7e-22 Score=205.01 Aligned_cols=264 Identities=17% Similarity=0.202 Sum_probs=190.1
Q ss_pred eeEEeeccCccCCCCcchHHHHHHHHHHhhccCCC---------cEEEEcCceEEee-ceeeeccCCCcceEEEEcc---
Q 043588 31 TTYNVLSFGAKGNGVTDSTQAFAKAWDAACTSTES---------ATINVPKGRYLLG-SVAFKGDCKSSDITFRIDG--- 97 (397)
Q Consensus 31 ~~~~v~d~GA~~dg~tddt~aiq~Ai~~a~~~~~g---------~~v~ip~G~Y~~~-~~~l~~~~~s~~~~l~~~G--- 97 (397)
..++|+||||+|||.+|||+|||+||+++ ++.++ ++||||+|+|++. +|.++ + ++.|.+++
T Consensus 48 v~~nV~dfGA~GDG~tDDT~Aiq~Ai~~a-~~~Gggc~~st~~~~~V~~P~GtYlvs~tI~l~----~-~t~L~G~~~~~ 121 (758)
T 3eqn_A 48 VFRNVKNYGAKGDGNTDDTAAIQAAINAG-GRCGQGCDSTTTQPALVYFPPGTYKVSSPLVVL----Y-QTQLIGDAKNL 121 (758)
T ss_dssp SEEEGGGGTCCCEEEEECHHHHHHHHHTT-SCSCTTCCCCSSSCEEEEECSSEEEESSCEECC----T-TEEEEECSSSC
T ss_pred EEEEHHHcCcCCCCCchhHHHHHHHHHHh-hhcccccccccccceEEEECCceEEEcccEEcc----C-CeEEEecCCCC
Confidence 36799999999999999999999999865 44333 6999999999875 78887 6 99999985
Q ss_pred -EEEeeccccccCCCcceEEEecccceEEEceeeeCCCCcccccccCCCCCCCCceeEEEEccCCeEEEeeEEecCcceE
Q 043588 98 -TLVAPADYRVLGQADNWLSFEGVSGVSIIGGALDAKGSSLWACKASGANCPDGATTLRFTNSNNIRINGLLSLNSQMFH 176 (397)
Q Consensus 98 -~l~~~~~~~~~~~~~~~i~~~~~~ni~I~GG~idg~g~~~w~~~~~~~~~~~~~~~i~~~~~~nv~i~~v~i~~~~~~~ 176 (397)
+|++.+. |... .+ |.+...+++|..||.... ..++..+|+.|+ ++..++...+
T Consensus 122 pvIka~~~---F~G~-~l----------i~~d~y~~~G~~w~~~~~-----------~F~r~irNlviD-~t~~~~~~~g 175 (758)
T 3eqn_A 122 PTLLAAPN---FSGI-AL----------IDADPYLAGGAQYYVNQN-----------NFFRSVRNFVID-LRQVSGSATG 175 (758)
T ss_dssp CEEEECTT---CCSS-CS----------EESSCBCGGGCBSSCGGG-----------CCCEEEEEEEEE-CTTCSSCEEE
T ss_pred CeEecCCC---CCCc-ce----------eeccccCCCCcccccccc-----------ceeeeecceEEe-ccccCCCceE
Confidence 6665432 2210 11 233445567777875432 244566778887 5656666789
Q ss_pred EEEeceecEEEEeEEEECCCCC-CCCCceeeecceeEEEEecEEecCCceEEeCCCCeeEEEEeeEEecCc-eeEEeeec
Q 043588 177 IVINGCKDVHIEGVTVIAPGNS-PNTDGIHVQLSTNVKITNCTIKTGDDCIPIGPGTKNLWIERVTCGPGH-GISIGSLA 254 (397)
Q Consensus 177 i~~~~~~nv~i~n~~i~~~~~~-~~~DGi~~~~s~nv~I~n~~i~~~dD~i~i~~~s~nv~i~n~~~~~~~-gi~igs~~ 254 (397)
|++..+++..|+||.|..+... ...+||++++++...|+|++|..|+-++.++. +..+++|.+|.++. +|.+.-
T Consensus 176 Ihw~vaQatsL~Nv~i~m~~~sg~~~~GI~~e~GSgg~i~Dl~f~GG~~G~~~gn--QQfT~rnltF~~~~taI~~~w-- 251 (758)
T 3eqn_A 176 IHWQVSQATSLINIVFQMSTAAGNQHQGIFMENGSGGFLGDLVFNGGNIGATFGN--QQFTVRNLTFNNANTAINAIW-- 251 (758)
T ss_dssp EECCCCSSEEEEEEEEECCCSTTCCEEEEEECSCCCCEEEEEEEESCSEEEEEEC--SCCEEEEEEEESCSEEEEEEE--
T ss_pred EEEEecCceEEEEEEEEecCCCCCcceeEEecCCCceEEEeeEEeCCceEEEcCC--cceEEeccEEeChHHHHhhhc--
Confidence 9999999999999999997654 34899999998999999999999998988854 78888888888763 555432
Q ss_pred ccCCcCCEEEEEEEeeEEeCCcceEEEEeecCC--CCceEEceEEEEEEEecCcccEEEeeecCCCCCCCCCCccceEEE
Q 043588 255 KDLIEEGVQNVTVFKTVFTGTTNGFRIKSWARP--SNGFVQGVSFIDAIMRNVQFPIVIDQNYCPHNLNCPGQVSGVKIN 332 (397)
Q Consensus 255 ~~~~~~~v~nI~i~n~~~~~~~~gi~i~~~~~~--~~g~i~ni~~~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~i~ 332 (397)
.+ ..++.+++|.+..-||.+...... ..-.+.-|++.|.+++++..++... +.... .......++
T Consensus 252 ~w-------gwt~~~~~i~nc~vGi~~~~g~~~~~~~q~vGsv~l~Ds~~~n~~~~i~t~--~~~~~----~~~~slvle 318 (758)
T 3eqn_A 252 NW-------GWTFQRITINNCQVGFDLTQGGTSNTGAQGVGAEAIIDAVVTNTQTFVRWS--GASSG----HLQGSLVLN 318 (758)
T ss_dssp BS-------CEEEEEEEEESCSEEEEECCCCSSTTSCCCBCEEEEEEEEEESCSEEEEES--SCCCS----SCSSEEEEE
T ss_pred Cc-------eEEEEEeEEECCCccEEEcCCCCCcccCcceeeEEEEEeeEEcccceEEec--cCCCC----CCcceEEEE
Confidence 22 266777777777778888542110 1224667899999999887555443 22111 112457899
Q ss_pred eEEEEeEEEee
Q 043588 333 DITYQDIRGTS 343 (397)
Q Consensus 333 nI~f~ni~~~~ 343 (397)
||.|+|+....
T Consensus 319 Nv~~~nv~~~v 329 (758)
T 3eqn_A 319 NIQLTNVPVAV 329 (758)
T ss_dssp EEEEEEEEEEE
T ss_pred eEEeeCCCeEE
Confidence 99999876433
No 21
>2uvf_A Exopolygalacturonase; GH28, pectin, cell WALL, hydrolase, periplasm, beta-helix, glycosidase, EXO-activity; HET: AD0; 2.1A {Yersinia enterocolitica} PDB: 2uve_A*
Probab=99.90 E-value=1e-21 Score=201.41 Aligned_cols=223 Identities=11% Similarity=0.106 Sum_probs=174.4
Q ss_pred ceEEEecccceEEEceeeeCCCCcccccccCCCCCCCCceeEEEEccCCeEEEeeEEec--Cc-ceEEEEeceecEEEEe
Q 043588 113 NWLSFEGVSGVSIIGGALDAKGSSLWACKASGANCPDGATTLRFTNSNNIRINGLLSLN--SQ-MFHIVINGCKDVHIEG 189 (397)
Q Consensus 113 ~~i~~~~~~ni~I~GG~idg~g~~~w~~~~~~~~~~~~~~~i~~~~~~nv~i~~v~i~~--~~-~~~i~~~~~~nv~i~n 189 (397)
.++.+.+++|++|+|-++... ++| .+++.+|+|++|+++++.. ++ .++|++..|+||+|+|
T Consensus 332 ~~i~~~~~~nv~I~giti~ns--~~~--------------~i~~~~~~nv~i~~v~i~~~~~~NtDGidi~~s~nV~I~n 395 (608)
T 2uvf_A 332 SLMTLRGVENVYLAGFTVRNP--AFH--------------GIMNLENHNVVANGLIHQTYDANNGDGIEFGNSQNVMVFN 395 (608)
T ss_dssp CSEEEESEEEEEEESCEEECC--SSC--------------SEEEESCEEEEEESCEEECTTCTTCCSEEEESCEEEEEES
T ss_pred eEEEEEeeeeEEEeCcEEecC--CCC--------------EEEEecCCCEEEeeEEEcCCCCCCCCeEEecCCceEEEEe
Confidence 468899999999999444321 233 4899999999999999864 22 5689999999999999
Q ss_pred EEEECCCC------CCCCCceeeecceeEEEEecEEecCCceEEeCCC----CeeEEEEeeEEecC-ceeEEeeecccCC
Q 043588 190 VTVIAPGN------SPNTDGIHVQLSTNVKITNCTIKTGDDCIPIGPG----TKNLWIERVTCGPG-HGISIGSLAKDLI 258 (397)
Q Consensus 190 ~~i~~~~~------~~~~DGi~~~~s~nv~I~n~~i~~~dD~i~i~~~----s~nv~i~n~~~~~~-~gi~igs~~~~~~ 258 (397)
++|.+.+| +.+.||++...|+||+|+||++..++++++++++ .+||+|+||+|.++ +|++|++...+
T Consensus 396 ~~i~~gDD~Iaiksg~~~~g~~~~~s~nI~I~n~~~~~ghg~~~iGS~~~~~v~nI~v~n~~~~~t~~GirIKt~~g~-- 473 (608)
T 2uvf_A 396 NFFDTGDDCINFAAGTGEKAQEQEPMKGAWLFNNYFRMGHGAIVTGSHTGAWIEDILAENNVMYLTDIGLRAKSTSTI-- 473 (608)
T ss_dssp CEEECSSCSEEEECCCSGGGGGSCCEEEEEEESCEECSSSCSEEEESCCTTCEEEEEEESCEEESCSEEEEEEEETTT--
T ss_pred eEEecCCceEEecCCcCccccccccccCEEEEeEEEeCCCCeEEEcccCCCCEEEEEEEeEEEECCCceEEEeeecCC--
Confidence 99998665 2345666655689999999999999998888873 59999999999987 69999986433
Q ss_pred cCCEEEEEEEeeEEeCC-cceEEEEeecCC-----------CCceEEceEEEEEEEecCc---ccEEEeeecCCCCCCCC
Q 043588 259 EEGVQNVTVFKTVFTGT-TNGFRIKSWARP-----------SNGFVQGVSFIDAIMRNVQ---FPIVIDQNYCPHNLNCP 323 (397)
Q Consensus 259 ~~~v~nI~i~n~~~~~~-~~gi~i~~~~~~-----------~~g~i~ni~~~ni~~~~~~---~~i~i~~~~~~~~~~~~ 323 (397)
.+.++||+|+|++|.+. .++|.|...+.. ..+.+++|+|+|+++++.. .++.|... ++
T Consensus 474 gG~v~nI~~~ni~m~~v~~~~i~I~~~y~~~~~~~~~~~~~~~~~~~~V~i~nI~~~n~~gt~~~i~i~g~-~~------ 546 (608)
T 2uvf_A 474 GGGARNVTFRNNAMRDLAKQVMVMTLDYADSNANIDYPPAKIPAQFYDFTLKNVTVDNSTGKNPSIEIKGD-TA------ 546 (608)
T ss_dssp CCEEEEEEEEEEEEEEESSEEEEEEEECCCCSCCCSSCCCSSCCEEEEEEEEEEEEEEECSSSCSEEEECB-GG------
T ss_pred CceEECcEEEeeEEEccccccEEEEeccCCCCcccccCCcCCCCccccEEEEeEEEEeeeceEEeEEEEEE-cC------
Confidence 36799999999999998 589999876541 2367999999999999876 36667632 21
Q ss_pred CCccceEEEeEEEEeEEEeeCCCceEEEeecCCCceecEEEEeEEEE
Q 043588 324 GQVSGVKINDITYQDIRGTSATPIAIKFDCSTKYPCQGIKLQNINLR 370 (397)
Q Consensus 324 ~~~~~~~i~nI~f~ni~~~~~~~~~~~i~~~~~~~i~ni~~~ni~i~ 370 (397)
...+++||+|+||+++... +..+. .+++++|+||+++
T Consensus 547 ---~~~p~~ni~~~nv~i~~~~--~~~i~-----~~~~~~~~nv~i~ 583 (608)
T 2uvf_A 547 ---NKAWHRLVHVNNVQLNNVT--PTAIS-----DLRDSEFNKVTFT 583 (608)
T ss_dssp ---GTBCEEEEEEEEEEEESCC--CCEEE-----SEESCEEEEEEEE
T ss_pred ---CCCccccEEEEeEEEEccC--ceeEE-----eccCceEEeEEEe
Confidence 3457999999999998865 34443 3566677666665
No 22
>1ia5_A Polygalacturonase; glycosylhydrolase, hydrolase; HET: MAN NAG; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3 PDB: 1ib4_A*
Probab=99.88 E-value=3.8e-20 Score=177.02 Aligned_cols=202 Identities=20% Similarity=0.270 Sum_probs=163.0
Q ss_pred eEEEEccCCeEEEee---EEecCc--ce-------------EEEEeceecEEEEeEEEECCCCCCCCCceeeecceeEEE
Q 043588 153 TLRFTNSNNIRINGL---LSLNSQ--MF-------------HIVINGCKDVHIEGVTVIAPGNSPNTDGIHVQLSTNVKI 214 (397)
Q Consensus 153 ~i~~~~~~nv~i~~v---~i~~~~--~~-------------~i~~~~~~nv~i~n~~i~~~~~~~~~DGi~~~~s~nv~I 214 (397)
++.+.. +|++|.|. +|.... .| .+.+..|+|++|+++++.+++ .+++++..|++|+|
T Consensus 66 li~~~~-~nv~I~G~~gG~IdG~G~~~w~~~~~~~~~~rp~~i~~~~~~nv~i~~i~i~nsp----~~~i~i~~~~nv~i 140 (339)
T 1ia5_A 66 LISVSG-SDLTITGASGHSINGDGSRWWDGEGGNGGKTKPKFFAAHSLTNSVISGLKIVNSP----VQVFSVAGSDYLTL 140 (339)
T ss_dssp SEEEEE-ESCEEEECTTCEEECCGGGTCSSCTTTSSSCCCCCEEEEEEEEEEEESCEEECCS----SCCEEEESCEEEEE
T ss_pred EEEEEc-CcEEEEcCCCeEEeCCCCccccccccCCCCCCCeEEEEeecCcEEEEEEEEEcCC----cceEEEecccCeEE
Confidence 566654 99999997 664432 22 488999999999999999953 47899999999999
Q ss_pred EecEEecC---------CceEEeCCCCeeEEEEeeEEecCc-eeEEeeecccCCcCCEEEEEEEeeEEeCCcceEEEEee
Q 043588 215 TNCTIKTG---------DDCIPIGPGTKNLWIERVTCGPGH-GISIGSLAKDLIEEGVQNVTVFKTVFTGTTNGFRIKSW 284 (397)
Q Consensus 215 ~n~~i~~~---------dD~i~i~~~s~nv~i~n~~~~~~~-gi~igs~~~~~~~~~v~nI~i~n~~~~~~~~gi~i~~~ 284 (397)
+++++.+. .|+|.+.+ ++||+|+||++..++ ++++++. +||+|+||++.+. +|+.|++.
T Consensus 141 ~~~~I~~~~~d~~~~~ntDGid~~~-s~nV~I~n~~i~~gDDcIaiksg---------~nI~i~n~~~~~g-hGisiGS~ 209 (339)
T 1ia5_A 141 KDITIDNSDGDDNGGHNTDAFDIGT-STYVTISGATVYNQDDCVAVNSG---------ENIYFSGGYCSGG-HGLSIGSV 209 (339)
T ss_dssp ESCEEECGGGTTTTCCSCCSEEEES-CEEEEEESCEEECSSCSEEESSE---------EEEEEESCEEESS-SCEEEEEE
T ss_pred eeEEEECCccccccCCCCCcEEecC-CceEEEEeeEEEcCCCeEEEeCC---------eEEEEEeEEEECC-ceEEECcC
Confidence 99999862 57888887 999999999998875 5999762 8999999999986 79999986
Q ss_pred cCCCCceEEceEEEEEEEecCcccEEEeeecCCCCCCCCCCccceEEEeEEEEeEEEeeCCCceEEEee-------cC--
Q 043588 285 ARPSNGFVQGVSFIDAIMRNVQFPIVIDQNYCPHNLNCPGQVSGVKINDITYQDIRGTSATPIAIKFDC-------ST-- 355 (397)
Q Consensus 285 ~~~~~g~i~ni~~~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~i~nI~f~ni~~~~~~~~~~~i~~-------~~-- 355 (397)
.....+.++||+|+|+++.+..++++|+.+.. +.+.++||+|+||++.....+++.++. .|
T Consensus 210 g~~~~~~v~nV~v~n~~~~~t~~girIKt~~g----------~~G~v~nI~~~ni~~~~v~~~~i~i~~~y~~~~~~p~~ 279 (339)
T 1ia5_A 210 GGRSDNTVKNVTFVDSTIINSDNGVRIKTNID----------TTGSVSDVTYKDITLTSIAKYGIVVQQNYGDTSSTPTT 279 (339)
T ss_dssp CSSSCCEEEEEEEEEEEEESCSEEEEEEEETT----------CCCEEEEEEEEEEEEEEESSEEEEEEEEETCTTSCCCS
T ss_pred CcccCCCEEEEEEEeeEEECCCcEEEEEEeCC----------CCcEEEeeEEEEEEEECcccccEEEEccCCCCCCCCcC
Confidence 43345789999999999999999999997632 235899999999999976655777763 12
Q ss_pred CCceecEEEEeEEEEeCC--Cccceee
Q 043588 356 KYPCQGIKLQNINLRHLK--QVAQSSC 380 (397)
Q Consensus 356 ~~~i~ni~~~ni~i~~~~--~~~~~~c 380 (397)
..+++||+|+||+.+... .+..+.|
T Consensus 280 ~~~i~ni~~~ni~gt~~~~~~~v~i~c 306 (339)
T 1ia5_A 280 GVPITDFVLDNVHGSVVSSGTNILISC 306 (339)
T ss_dssp SSCEEEEEEEEEEEEECTTSEEEEEEC
T ss_pred CceEEEEEEEeEEEEeCCCCEEEEEEe
Confidence 358999999999999765 2333455
No 23
>2iq7_A Endopolygalacturonase; parallel beta helix, hydrolase; HET: NAG MAN PG4; 1.94A {Colletotrichum lupini}
Probab=99.87 E-value=7.5e-20 Score=175.05 Aligned_cols=195 Identities=18% Similarity=0.275 Sum_probs=159.8
Q ss_pred eEEEEccCCeEEEee---EEecCc--ce-------------EEEEeceecEEEEeEEEECCCCCCCCCceeeecceeEEE
Q 043588 153 TLRFTNSNNIRINGL---LSLNSQ--MF-------------HIVINGCKDVHIEGVTVIAPGNSPNTDGIHVQLSTNVKI 214 (397)
Q Consensus 153 ~i~~~~~~nv~i~~v---~i~~~~--~~-------------~i~~~~~~nv~i~n~~i~~~~~~~~~DGi~~~~s~nv~I 214 (397)
++.+.. +|++|.|. +|.... .| .+.+..|+|++|+++++.+++ .+++++..|++|+|
T Consensus 62 ~i~~~~-~nv~I~G~~gG~IdG~G~~~w~~~~~~~~~~rp~~i~~~~~~nv~i~giti~nsp----~~~i~i~~~~nv~i 136 (339)
T 2iq7_A 62 LISFSG-TNININGASGHSIDCQGSRWWDSKGSNGGKTKPKFFYAHSLKSSNIKGLNVLNTP----VQAFSINSATTLGV 136 (339)
T ss_dssp SEEEEE-ESCEEEECTTCEEECCGGGTCCSCGGGSSSCCCCCEEEEEEEEEEEECCEEECCS----SCCEEEESCEEEEE
T ss_pred EEEEEc-ccEEEEcCCCCEEECCcccccccccccCCCCCCeEEEEeeeCcEEEEEEEEEeCC----cceEEEeccCCEEE
Confidence 566654 99999997 664332 23 488999999999999999953 47899999999999
Q ss_pred EecEEecC---------CceEEeCCCCeeEEEEeeEEecCc-eeEEeeecccCCcCCEEEEEEEeeEEeCCcceEEEEee
Q 043588 215 TNCTIKTG---------DDCIPIGPGTKNLWIERVTCGPGH-GISIGSLAKDLIEEGVQNVTVFKTVFTGTTNGFRIKSW 284 (397)
Q Consensus 215 ~n~~i~~~---------dD~i~i~~~s~nv~i~n~~~~~~~-gi~igs~~~~~~~~~v~nI~i~n~~~~~~~~gi~i~~~ 284 (397)
+++++.+. .|+|.+.+ ++||+|+||++..++ ++++++. +||+|+||++.+. +|+.|++.
T Consensus 137 ~~~~I~~~~~d~~~~~ntDGid~~~-s~nV~I~n~~i~~gDDciaiksg---------~nI~i~n~~~~~g-hGisiGSl 205 (339)
T 2iq7_A 137 YDVIIDNSAGDSAGGHNTDAFDVGS-STGVYISGANVKNQDDCLAINSG---------TNITFTGGTCSGG-HGLSIGSV 205 (339)
T ss_dssp ESCEEECGGGGGTTCCSCCSEEEES-CEEEEEESCEEECSSCSEEESSE---------EEEEEESCEEESS-CCEEEEEE
T ss_pred EEEEEECCccccccCCCCCcEEEcC-cceEEEEecEEecCCCEEEEcCC---------ccEEEEeEEEECC-ceEEECcC
Confidence 99999863 47888887 999999999998875 5999762 8999999999986 69999986
Q ss_pred cCCCCceEEceEEEEEEEecCcccEEEeeecCCCCCCCCCCccceEEEeEEEEeEEEeeCCCceEEEee---------cC
Q 043588 285 ARPSNGFVQGVSFIDAIMRNVQFPIVIDQNYCPHNLNCPGQVSGVKINDITYQDIRGTSATPIAIKFDC---------ST 355 (397)
Q Consensus 285 ~~~~~g~i~ni~~~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~i~nI~f~ni~~~~~~~~~~~i~~---------~~ 355 (397)
.....+.++||+|+|+++.+..++++|+.+.. +.+.++||+|+||++.....+++.++. .|
T Consensus 206 g~~~~~~v~nV~v~n~~~~~~~~girIkt~~g----------~~G~v~nI~~~ni~~~~v~~~~i~i~~~y~~~~~~~~p 275 (339)
T 2iq7_A 206 GGRSDNTVKTVTISNSKIVNSDNGVRIKTVSG----------ATGSVSGVTYSGITLSNIAKYGIVIEQDYENGSPTGTP 275 (339)
T ss_dssp SSSSCCEEEEEEEEEEEEESCSEEEEEEEETT----------CCCEEEEEEEEEEEEEEESSEEEEEEEEEETTEECSCC
T ss_pred CcccCCCEEEEEEEeeEEECCCcEEEEEEeCC----------CCeEEEEEEEEeEEccCcccccEEEEeecCCCCCCCCC
Confidence 43355889999999999999999999997632 235899999999999986555776642 12
Q ss_pred --CCceecEEEEeEEEEeCC
Q 043588 356 --KYPCQGIKLQNINLRHLK 373 (397)
Q Consensus 356 --~~~i~ni~~~ni~i~~~~ 373 (397)
..+++||+|+||+.+...
T Consensus 276 ~~~~~i~ni~~~ni~gt~~~ 295 (339)
T 2iq7_A 276 TNGVPITGLTLSKITGSVAS 295 (339)
T ss_dssp CSSSCEEEEEEEEEEEEECT
T ss_pred CCCceEEEEEEEeEEEEeCC
Confidence 358999999999999865
No 24
>1czf_A Polygalacturonase II; beta helix, hydrolase; HET: NAG; 1.68A {Aspergillus niger} SCOP: b.80.1.3
Probab=99.87 E-value=3.9e-20 Score=178.06 Aligned_cols=194 Identities=17% Similarity=0.229 Sum_probs=157.6
Q ss_pred eEEEEccCCeEEEe---eEEecCc--ce------------EEEEeceecEEEEeEEEECCCCCCCCCceeeecceeEEEE
Q 043588 153 TLRFTNSNNIRING---LLSLNSQ--MF------------HIVINGCKDVHIEGVTVIAPGNSPNTDGIHVQLSTNVKIT 215 (397)
Q Consensus 153 ~i~~~~~~nv~i~~---v~i~~~~--~~------------~i~~~~~~nv~i~n~~i~~~~~~~~~DGi~~~~s~nv~I~ 215 (397)
+|.+ +.+|++|.| -+|.... .| .+.+..|+|++|+++++.+++ ..++++. |+||+|+
T Consensus 89 ~i~~-~~~nv~I~G~~~g~IdG~G~~~w~~~~~~~~~rP~~i~~~~~~nv~i~~iti~nsp----~~~i~i~-~~nv~i~ 162 (362)
T 1czf_A 89 LISM-SGEHITVTGASGHLINCDGARWWDGKGTSGKKKPKFFYAHGLDSSSITGLNIKNTP----LMAFSVQ-ANDITFT 162 (362)
T ss_dssp SEEE-EEESCEEEECTTCEEECCGGGTCCSCTTSSSCCCCCEEEEEEETEEEESCEEECCS----SCCEEEE-CSSEEEE
T ss_pred EEEE-eCccEEEEcCCCcEEECCCchhhcccCCCCCCCCeEEEEeecccEEEEEEEEecCC----ccEEEEe-eCCEEEE
Confidence 5666 459999999 4554332 23 488999999999999999953 3569999 9999999
Q ss_pred ecEEecC---------CceEEeCCCCeeEEEEeeEEecCc-eeEEeeecccCCcCCEEEEEEEeeEEeCCcceEEEEeec
Q 043588 216 NCTIKTG---------DDCIPIGPGTKNLWIERVTCGPGH-GISIGSLAKDLIEEGVQNVTVFKTVFTGTTNGFRIKSWA 285 (397)
Q Consensus 216 n~~i~~~---------dD~i~i~~~s~nv~i~n~~~~~~~-gi~igs~~~~~~~~~v~nI~i~n~~~~~~~~gi~i~~~~ 285 (397)
|++|.+. .|+|.+.+ ++||+|+||++..++ +++|++. +||+|+||++.+. +|+.|++..
T Consensus 163 ~~~I~~~~~d~~~~~NtDGidi~~-s~nV~I~n~~i~~gDDcIaiksg---------~nI~i~n~~~~~g-hGisiGS~G 231 (362)
T 1czf_A 163 DVTINNADGDTQGGHNTDAFDVGN-SVGVNIIKPWVHNQDDCLAVNSG---------ENIWFTGGTCIGG-HGLSIGSVG 231 (362)
T ss_dssp SCEEECGGGGTTTCCSCCSEEECS-CEEEEEESCEEECSSCSEEESSE---------EEEEEESCEEESS-CCEEEEEEC
T ss_pred EEEEECCccccccCCCCCceeecC-cceEEEEeeEEecCCCEEEEeCC---------eEEEEEEEEEeCC-ceeEEeecc
Confidence 9999872 47888887 999999999999885 5999762 8999999999986 799999863
Q ss_pred CCCCceEEceEEEEEEEecCcccEEEeeecCCCCCCCCCCccceEEEeEEEEeEEEeeCCCceEEEee---------cC-
Q 043588 286 RPSNGFVQGVSFIDAIMRNVQFPIVIDQNYCPHNLNCPGQVSGVKINDITYQDIRGTSATPIAIKFDC---------ST- 355 (397)
Q Consensus 286 ~~~~g~i~ni~~~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~i~nI~f~ni~~~~~~~~~~~i~~---------~~- 355 (397)
....+.++||+|+|+++.+..++++|+.+.. +.+.++||+|+||++......++.++. .|
T Consensus 232 ~~~~~~v~nV~v~n~~~~~t~~GirIKt~~g----------~~G~v~nI~~~ni~~~~v~~~~i~I~~~Y~~~~~~~~p~ 301 (362)
T 1czf_A 232 DRSNNVVKNVTIEHSTVSNSENAVRIKTISG----------ATGSVSEITYSNIVMSGISDYGVVIQQDYEDGKPTGKPT 301 (362)
T ss_dssp SSSCCEEEEEEEEEEEEEEEEEEEEEEEETT----------CCEEEEEEEEEEEEEEEEEEEEEEEEEEEETTEECSCCC
T ss_pred ccCCCCEEEEEEEeeEEECCceEEEEEEeCC----------CCceEeeEEEEeEEEECcccccEEEEEecCCCCCCCCCC
Confidence 3256899999999999999999999997632 235899999999998876445676652 12
Q ss_pred -CCceecEEEEeEEEEeCC
Q 043588 356 -KYPCQGIKLQNINLRHLK 373 (397)
Q Consensus 356 -~~~i~ni~~~ni~i~~~~ 373 (397)
..+++||+|+||+.+...
T Consensus 302 ~~~~i~nI~~~ni~gt~~~ 320 (362)
T 1czf_A 302 NGVTIQDVKLESVTGSVDS 320 (362)
T ss_dssp SSEEEEEEEEEEEEEEECT
T ss_pred CCceEEEEEEEEEEEEecC
Confidence 257999999999999765
No 25
>1nhc_A Polygalacturonase I; beta-helix, hydrolase; HET: MAN NAG BMA; 1.70A {Aspergillus niger} SCOP: b.80.1.3
Probab=99.87 E-value=1.4e-19 Score=172.99 Aligned_cols=201 Identities=19% Similarity=0.300 Sum_probs=161.0
Q ss_pred eEEEEccCCeEEEee---EEecCc--ce-------------EEEEeceecEEEEeEEEECCCCCCCCCceeeecceeEEE
Q 043588 153 TLRFTNSNNIRINGL---LSLNSQ--MF-------------HIVINGCKDVHIEGVTVIAPGNSPNTDGIHVQLSTNVKI 214 (397)
Q Consensus 153 ~i~~~~~~nv~i~~v---~i~~~~--~~-------------~i~~~~~~nv~i~n~~i~~~~~~~~~DGi~~~~s~nv~I 214 (397)
++.+ ..+|++|.|. +|.... .| .+.+..|+|++|+++++.+++ ..++++. |++|+|
T Consensus 62 li~~-~~~nv~I~G~~gG~IdG~G~~~w~~~~~~~~~~rp~~i~~~~~~nv~i~~i~i~nsp----~~~i~i~-~~nv~i 135 (336)
T 1nhc_A 62 LIRF-GGKDLTVTMADGAVIDGDGSRWWDSKGTNGGKTKPKFMYIHDVEDSTFKGINIKNTP----VQAISVQ-ATNVHL 135 (336)
T ss_dssp SEEC-CEESCEEEECTTCEEECCGGGTCCSCTTTSSSCCCCCEEEEEEEEEEEESCEEECCS----SCCEEEE-EEEEEE
T ss_pred EEEE-ecCCEEEEcCCCeEEECCccccccccCcCCCCCCceEEEEeeeCcEEEEEEEEEeCC----ccEEEEE-eCCEEE
Confidence 4555 4599999996 564332 23 488999999999999999953 3479999 999999
Q ss_pred EecEEecC---------CceEEeCCCCeeEEEEeeEEecCc-eeEEeeecccCCcCCEEEEEEEeeEEeCCcceEEEEee
Q 043588 215 TNCTIKTG---------DDCIPIGPGTKNLWIERVTCGPGH-GISIGSLAKDLIEEGVQNVTVFKTVFTGTTNGFRIKSW 284 (397)
Q Consensus 215 ~n~~i~~~---------dD~i~i~~~s~nv~i~n~~~~~~~-gi~igs~~~~~~~~~v~nI~i~n~~~~~~~~gi~i~~~ 284 (397)
+|+++.+. .|+|.+.+ ++||+|+||++..++ +++|++. +||+|+||++.+. +|+.|++.
T Consensus 136 ~~~~I~~~~~d~~~~~ntDGidi~~-s~nV~I~n~~i~~gDDciaiksg---------~nI~i~n~~~~~g-hGisiGS~ 204 (336)
T 1nhc_A 136 NDFTIDNSDGDDNGGHNTDGFDISE-STGVYISGATVKNQDDCIAINSG---------ESISFTGGTCSGG-HGLSIGSV 204 (336)
T ss_dssp ESCEEECTTHHHHTCCSCCSEEECS-CEEEEEESCEEESSSEEEEESSE---------EEEEEESCEEESS-SEEEEEEE
T ss_pred EEEEEECCCcccccCCCCCcEEecC-CCeEEEEeCEEEcCCCEEEEeCC---------eEEEEEeEEEECC-cCceEccC
Confidence 99999873 57899987 999999999998875 5999762 8999999999986 79999986
Q ss_pred cCCCCceEEceEEEEEEEecCcccEEEeeecCCCCCCCCCCccceEEEeEEEEeEEEeeCCCceEEEee---------cC
Q 043588 285 ARPSNGFVQGVSFIDAIMRNVQFPIVIDQNYCPHNLNCPGQVSGVKINDITYQDIRGTSATPIAIKFDC---------ST 355 (397)
Q Consensus 285 ~~~~~g~i~ni~~~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~i~nI~f~ni~~~~~~~~~~~i~~---------~~ 355 (397)
.....+.++||+|+|+++.+..++++|+.+.. +.+.++||+|+||++.....+++.++. .|
T Consensus 205 g~~~~~~v~nV~v~n~~~~~t~~girIkt~~g----------~~G~v~nI~~~ni~~~~v~~~~i~i~~~y~~~~~~~~p 274 (336)
T 1nhc_A 205 GGRDDNTVKNVTISDSTVSNSANGVRIKTIYK----------ETGDVSEITYSNIQLSGITDYGIVIEQDYENGSPTGTP 274 (336)
T ss_dssp SSSSCCEEEEEEEEEEEEESCSEEEEEEEETT----------CCCEEEEEEEEEEEEEEESSEEEEEEEEEETTEECSCC
T ss_pred ccccCCCEEEEEEEeeEEECCCcEEEEEEECC----------CCCEEeeeEEeeEEeeccccccEEEEeecCCCCCCCCC
Confidence 43245789999999999999999999997532 234799999999999987655776642 12
Q ss_pred --CCceecEEEEeEEEEeCC-C-ccceee
Q 043588 356 --KYPCQGIKLQNINLRHLK-Q-VAQSSC 380 (397)
Q Consensus 356 --~~~i~ni~~~ni~i~~~~-~-~~~~~c 380 (397)
..+++||+|+||+.+... . +..+.|
T Consensus 275 ~~~~~i~~i~~~ni~gt~~~~~~~v~i~c 303 (336)
T 1nhc_A 275 STGIPITDVTVDGVTGTLEDDATQVYILC 303 (336)
T ss_dssp CSSSCEEEEEEEEEEEEECTTCEEEEEEC
T ss_pred CCCceEEEEEEEeEEEEeCCCCEEEEEEc
Confidence 357999999999999765 2 333455
No 26
>1bhe_A PEHA, polygalacturonase; family 28 glycosyl hydrolase, hydrolyses polygalacturonic acid, glycosidase; 1.90A {Pectobacterium carotovorum subsp} SCOP: b.80.1.3
Probab=99.86 E-value=1.8e-19 Score=175.04 Aligned_cols=218 Identities=14% Similarity=0.152 Sum_probs=169.7
Q ss_pred ceEEEEccEEEeeccc-------cccC------------CCcceEEEecccceEEEceeeeCCCCcccccccCCCCCCCC
Q 043588 90 DITFRIDGTLVAPADY-------RVLG------------QADNWLSFEGVSGVSIIGGALDAKGSSLWACKASGANCPDG 150 (397)
Q Consensus 90 ~~~l~~~G~l~~~~~~-------~~~~------------~~~~~i~~~~~~ni~I~GG~idg~g~~~w~~~~~~~~~~~~ 150 (397)
|++|.+.|+|...... ..|. ....++.+.+++|+.|+|-++.... .|
T Consensus 110 ni~I~G~G~IdG~G~~~~~~~~~~ww~~~~~~~~~~~~~~rp~~i~~~~~~nv~I~~iti~nsp--~~------------ 175 (376)
T 1bhe_A 110 NSGIYGPGTIDGQGGVKLQDKKVSWWELAADAKVKKLKQNTPRLIQINKSKNFTLYNVSLINSP--NF------------ 175 (376)
T ss_dssp SCEEECSSEEECCTTSCCSSSSSCTTHHHHHHHHHTCEECCCCSEEEESCEEEEEEEEEEECCS--SC------------
T ss_pred eEEEEeCEEEECCCCcccCCCccccccccccccccCccCCCCeEEEEEcceEEEEEeEEEECCC--cE------------
Confidence 8999999998765421 1221 0134788999999999995543221 22
Q ss_pred ceeEEEEccCCeEEEeeEEecCc----ceEEEEeceecEEEEeEEEECCCCCCCCCceeee------cceeEEEEecEEe
Q 043588 151 ATTLRFTNSNNIRINGLLSLNSQ----MFHIVINGCKDVHIEGVTVIAPGNSPNTDGIHVQ------LSTNVKITNCTIK 220 (397)
Q Consensus 151 ~~~i~~~~~~nv~i~~v~i~~~~----~~~i~~~~~~nv~i~n~~i~~~~~~~~~DGi~~~------~s~nv~I~n~~i~ 220 (397)
.+.+..|+|++|+++++.++. ..+|++..|+||+|+|++|.+. .|+|.+. .|+||+|+||++.
T Consensus 176 --~i~~~~~~~v~i~~v~I~~~~~~~NtDGid~~~s~nV~I~n~~i~~g-----DDcIaiks~~~~~~s~nI~I~n~~~~ 248 (376)
T 1bhe_A 176 --HVVFSDGDGFTAWKTTIKTPSTARNTDGIDPMSSKNITIAYSNIATG-----DDNVAIKAYKGRAETRNISILHNDFG 248 (376)
T ss_dssp --SEEEESCEEEEEEEEEEECCTTCSSCCSEEEESCEEEEEESCEEECS-----SCSEEEEECTTSCCEEEEEEEEEEEC
T ss_pred --EEEEeCCCcEEEEeEEEECCCCCCCCceEeecCCceEEEEeCEEecC-----CCeEEEcccCCCCCceEEEEEeeEEE
Confidence 388999999999999998752 4689999999999999999974 4789998 5999999999998
Q ss_pred cCCceEEeCC---CCeeEEEEeeEEecC-ceeEEeeecccCCcCCEEEEEEEeeEEeCCcceEEEEeecCC----CCceE
Q 043588 221 TGDDCIPIGP---GTKNLWIERVTCGPG-HGISIGSLAKDLIEEGVQNVTVFKTVFTGTTNGFRIKSWARP----SNGFV 292 (397)
Q Consensus 221 ~~dD~i~i~~---~s~nv~i~n~~~~~~-~gi~igs~~~~~~~~~v~nI~i~n~~~~~~~~gi~i~~~~~~----~~g~i 292 (397)
.++ ++++++ +.+||+|+||++.++ .|++|++... ..+.++||+|+|++|.+...+|.|...+.. ....+
T Consensus 249 ~gh-GisiGSe~~~v~nV~v~n~~~~~t~~GirIKt~~g--~~G~v~ni~f~ni~~~~v~~~i~i~~~y~~~~~~~~~~i 325 (376)
T 1bhe_A 249 TGH-GMSIGSETMGVYNVTVDDLKMNGTTNGLRIKSDKS--AAGVVNGVRYSNVVMKNVAKPIVIDTVYEKKEGSNVPDW 325 (376)
T ss_dssp SSS-CEEEEEEESSEEEEEEEEEEEESCSEEEEEECCTT--TCCEEEEEEEEEEEEESCSEEEEEETTSSCCCCCCCCEE
T ss_pred ccc-cEEeccCCccEeeEEEEeeEEeCCCcEEEEEEecC--CCceEeeEEEEeEEEeCCCceEEEEeeccCCCCCcCcEE
Confidence 765 688875 579999999999986 5899998532 246799999999999999999988754431 23579
Q ss_pred EceEEEEEEEecCcccEEEeeecCCCCCCCCCCccceEEEeEEEEeEEEeeC
Q 043588 293 QGVSFIDAIMRNVQFPIVIDQNYCPHNLNCPGQVSGVKINDITYQDIRGTSA 344 (397)
Q Consensus 293 ~ni~~~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~i~nI~f~ni~~~~~ 344 (397)
+||+|+|++.+... ++.+... +..+++||+|+||+++..
T Consensus 326 ~ni~~~ni~gt~~~-~~~l~g~------------~~~~~~~I~l~nv~l~~~ 364 (376)
T 1bhe_A 326 SDITFKDVTSETKG-VVVLNGE------------NAKKPIEVTMKNVKLTSD 364 (376)
T ss_dssp EEEEEEEEEECSCC-EEEEECT------------TCSSCEEEEEEEEECCTT
T ss_pred EEEEEEEEEEEecc-eEEEEeC------------CCCCeeeEEEEeEEEecC
Confidence 99999999998754 5555421 122568999999998764
No 27
>1hg8_A Endopolygalacturonase; hydrolase, pectin degradation; HET: NAG; 1.73A {Fusarium moniliforme} SCOP: b.80.1.3
Probab=99.85 E-value=4.9e-19 Score=169.83 Aligned_cols=217 Identities=16% Similarity=0.152 Sum_probs=167.4
Q ss_pred ceEEEEc--cEEEeeccccccCC--------Cc-ceEEE-e-cccceEEEceeeeCCCCcccccccCCCCCCCCceeEEE
Q 043588 90 DITFRID--GTLVAPADYRVLGQ--------AD-NWLSF-E-GVSGVSIIGGALDAKGSSLWACKASGANCPDGATTLRF 156 (397)
Q Consensus 90 ~~~l~~~--G~l~~~~~~~~~~~--------~~-~~i~~-~-~~~ni~I~GG~idg~g~~~w~~~~~~~~~~~~~~~i~~ 156 (397)
+++|.++ |+|.... ...|.. .+ .++.+ . .++|++|+|-++... +.| .+++
T Consensus 70 ni~I~G~~~G~IdG~G-~~ww~~~~~~~~~~~rP~~i~~~~~~~~nv~I~giti~ns--p~~--------------~i~i 132 (349)
T 1hg8_A 70 NITITGASGHVIDGNG-QAYWDGKGSNSNSNQKPDHFIVVQKTTGNSKITNLNIQNW--PVH--------------CFDI 132 (349)
T ss_dssp SCEEEECTTCEEECCG-GGTCCSCTTCTTSCCCCSEEEEEEEEESSEEEESCEEECC--SSE--------------EEEE
T ss_pred cEEEEecCCCEEcCCc-chhhhcccccCCCCCCCeEEEEeecCcCcEEEEEEEEEcC--CCc--------------eEEE
Confidence 8999994 7887642 222221 12 26777 6 677999999444322 123 5899
Q ss_pred EccCCeEEEeeEEecCc----------------ceEEEEeceecEEEEeEEEECCCCCCCCCceeeecceeEEEEecEEe
Q 043588 157 TNSNNIRINGLLSLNSQ----------------MFHIVINGCKDVHIEGVTVIAPGNSPNTDGIHVQLSTNVKITNCTIK 220 (397)
Q Consensus 157 ~~~~nv~i~~v~i~~~~----------------~~~i~~~~~~nv~i~n~~i~~~~~~~~~DGi~~~~s~nv~I~n~~i~ 220 (397)
.+|+|++|+++++.+++ .++|++..|+||+|+|++|.+ ..|+|.+.+++||+|+||++.
T Consensus 133 ~~~~nv~i~~~~I~~~~~~~~~~~~~~~~~~~NtDGid~~~s~nV~I~n~~i~~-----gDDcIaiksg~nI~i~n~~~~ 207 (349)
T 1hg8_A 133 TGSSQLTISGLILDNRAGDKPNAKSGSLPAAHNTDGFDISSSDHVTLDNNHVYN-----QDDCVAVTSGTNIVVSNMYCS 207 (349)
T ss_dssp ESCEEEEEEEEEEECGGGSSCCTTTTTSCSCCSCCSEEEESCEEEEEEEEEEEC-----SSCSEEESSEEEEEEEEEEEE
T ss_pred eccCCEEEEEEEEECCCCccccccccccccCCCCCeEEEccccEEEEEeeEEec-----CCCeEEeeCCeEEEEEeEEEe
Confidence 99999999999998752 357999999999999999997 348999999999999999999
Q ss_pred cCCceEEeCC-------CCeeEEEEeeEEecC-ceeEEeeecccCCcCCEEEEEEEeeEEeCCc-ceEEEEeecCC----
Q 043588 221 TGDDCIPIGP-------GTKNLWIERVTCGPG-HGISIGSLAKDLIEEGVQNVTVFKTVFTGTT-NGFRIKSWARP---- 287 (397)
Q Consensus 221 ~~dD~i~i~~-------~s~nv~i~n~~~~~~-~gi~igs~~~~~~~~~v~nI~i~n~~~~~~~-~gi~i~~~~~~---- 287 (397)
.++ +|++++ +.+||+|+||++.+. +|++|++...+ .+.++||+|+|++|.+.. +++.|...+..
T Consensus 208 ~gh-GisiGS~G~~~~~~v~nV~v~n~~~~~~~~GirIKt~~g~--~G~v~nI~~~ni~~~~v~~~~i~i~~~Y~~~~~~ 284 (349)
T 1hg8_A 208 GGH-GLSIGSVGGKSDNVVDGVQFLSSQVVNSQNGCRIKSNSGA--TGTINNVTYQNIALTNISTYGVDVQQDYLNGGPT 284 (349)
T ss_dssp SSC-CEEEEEESSSSCCEEEEEEEEEEEEEEEEEEEEEEEETTC--CEEEEEEEEEEEEEEEEEEEEEEEEEEECSSSBC
T ss_pred CCc-ceEEccccccccCCEEEEEEEEEEEECCCcEEEEEecCCC--CccccceEEEEEEEEccccccEEEEeeccCCCCC
Confidence 876 699965 269999999999876 68999986432 367999999999999975 69988765321
Q ss_pred ----CCceEEceEEEEEEEecCc--ccEEEeeecCCCCCCCCCCccceEEEeEEEEeEEEeeC
Q 043588 288 ----SNGFVQGVSFIDAIMRNVQ--FPIVIDQNYCPHNLNCPGQVSGVKINDITYQDIRGTSA 344 (397)
Q Consensus 288 ----~~g~i~ni~~~ni~~~~~~--~~i~i~~~~~~~~~~~~~~~~~~~i~nI~f~ni~~~~~ 344 (397)
....++||+|+|++.+... .++.+. ++ ..+.+||+|+||+++..
T Consensus 285 ~~p~~~~~i~~I~~~ni~gt~~~~~~~v~i~---c~----------~~~c~ni~~~nv~i~~~ 334 (349)
T 1hg8_A 285 GKPTNGVKISNIKFIKVTGTVASSAQDWFIL---CG----------DGSCSGFTFSGNAITGG 334 (349)
T ss_dssp SCCCSSEEEEEEEEEEEEEEECTTSEEEEEE---CC----------SSCEEEEEEESCEEECC
T ss_pred CcccCCceEEEEEEEeEEEEeCCCCEEEEEE---eC----------CCcCcCEEEEeEEEEcC
Confidence 1247999999999998754 456554 21 13789999999999864
No 28
>1k5c_A Endopolygalacturonase; beta helical structure, glycoside hydrolase, silver-LEAF IND substance, hydrolase; HET: NAG; 0.96A {Chondrostereum purpureum} SCOP: b.80.1.3 PDB: 1kcc_A* 1kcd_A*
Probab=99.82 E-value=1.6e-18 Score=165.20 Aligned_cols=189 Identities=12% Similarity=0.155 Sum_probs=152.4
Q ss_pred eEEEEccCCeEEEee--EEecCc--ce-------------EEEEeceecEEEEeEEEECCCCCCCCCceeeeccee-EEE
Q 043588 153 TLRFTNSNNIRINGL--LSLNSQ--MF-------------HIVINGCKDVHIEGVTVIAPGNSPNTDGIHVQLSTN-VKI 214 (397)
Q Consensus 153 ~i~~~~~~nv~i~~v--~i~~~~--~~-------------~i~~~~~~nv~i~n~~i~~~~~~~~~DGi~~~~s~n-v~I 214 (397)
+|.+. .+|++|.|- +|.... .| .+.+..|+ ++|+++++.+++ .+.+++..|+| |+|
T Consensus 60 ~i~~~-~~ni~I~G~~G~idG~G~~ww~~~~~~~~~~rP~~i~~~~~~-v~i~giti~nsp----~~~i~i~~~~n~v~i 133 (335)
T 1k5c_A 60 LFTID-GTGINFVGADHIFDGNGALYWDGKGTNNGTHKPHPFLKIKGS-GTYKKFEVLNSP----AQAISVGPTDAHLTL 133 (335)
T ss_dssp SEEEE-EEEEEEECTTCEEECCGGGTCCSCTTTSSSCCCCCSEEEEEE-EEEESCEEESCS----SCCEEEEEEEEEEEE
T ss_pred EEEEE-ccCEEEEeCccEEcCChhHhhhcccccCCCCCCeEEEEeceE-EEEEEEEEECCC----cceEEEEccCCeEEE
Confidence 56665 599999983 553221 12 37788999 999999999953 35799999999 999
Q ss_pred EecEEecC----------CceEEeCCCCeeEEEEeeEEecCc-eeEEeeecccCCcCCEEEEEEEeeEEeCCcceEEEEe
Q 043588 215 TNCTIKTG----------DDCIPIGPGTKNLWIERVTCGPGH-GISIGSLAKDLIEEGVQNVTVFKTVFTGTTNGFRIKS 283 (397)
Q Consensus 215 ~n~~i~~~----------dD~i~i~~~s~nv~i~n~~~~~~~-gi~igs~~~~~~~~~v~nI~i~n~~~~~~~~gi~i~~ 283 (397)
+|+++.+. .|++.+ + ++||+|+||++..++ .++|++. +||+|+||++.+. +|+.|++
T Consensus 134 ~~v~I~~~~~d~~~~~~NtDGidi-~-s~nV~I~n~~i~~gDDcIaiksg---------~nI~i~n~~~~~g-hGisIGS 201 (335)
T 1k5c_A 134 DGITVDDFAGDTKNLGHNTDGFDV-S-ANNVTIQNCIVKNQDDCIAINDG---------NNIRFENNQCSGG-HGISIGS 201 (335)
T ss_dssp ESCEEECGGGGGGGCCCSCCSEEE-E-CSSEEEESCEEESSSCSEEEEEE---------EEEEEESCEEESS-CCEEEEE
T ss_pred EEEEEECCCCcccccCCCCCeEcc-c-CCeEEEEeeEEEcCCCEEEeeCC---------eeEEEEEEEEECC-ccCeEee
Confidence 99999872 478999 5 999999999999886 4999872 8999999999986 7999998
Q ss_pred ecCCCCceEEceEEEEEEEecCcccEEEeeecCCCCCCCCCCccceEEEeEEEEeEEEeeCCCceEEEee-------cC-
Q 043588 284 WARPSNGFVQGVSFIDAIMRNVQFPIVIDQNYCPHNLNCPGQVSGVKINDITYQDIRGTSATPIAIKFDC-------ST- 355 (397)
Q Consensus 284 ~~~~~~g~i~ni~~~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~i~nI~f~ni~~~~~~~~~~~i~~-------~~- 355 (397)
... .+.|+||+|+|+++.+..++++|+.+... ..+.++||+|+||++......++.++. .|
T Consensus 202 ~g~--~~~v~nV~v~n~~~~~t~~girIKt~~g~---------~~G~v~nI~f~ni~~~~v~~~~i~i~~~Y~~~~~~p~ 270 (335)
T 1k5c_A 202 IAT--GKHVSNVVIKGNTVTRSMYGVRIKAQRTA---------TSASVSGVTYDANTISGIAKYGVLISQSYPDDVGNPG 270 (335)
T ss_dssp ECT--TCEEEEEEEESCEEEEEEEEEEEEEETTC---------CSCEEEEEEEESCEEEEEEEEEEEEEEEETSSSSSCC
T ss_pred ccC--CCCEEEEEEEeeEEECCCceEEEEEeCCC---------CcceEeeeEEEEEEEEccccccEEEEeeCCCCCCCCC
Confidence 732 58999999999999999999999976431 114799999999999886545777763 22
Q ss_pred -CCceecEEEEeEEEE
Q 043588 356 -KYPCQGIKLQNINLR 370 (397)
Q Consensus 356 -~~~i~ni~~~ni~i~ 370 (397)
..+++||+|+||++.
T Consensus 271 ~~~~i~nI~~~nI~~~ 286 (335)
T 1k5c_A 271 TGAPFSDVNFTGGATT 286 (335)
T ss_dssp SSSCEEEEEECSSCEE
T ss_pred CCceEEEEEEEEEEEe
Confidence 368999999999944
No 29
>1rmg_A Rgase A, rhamnogalacturonase A; hydrolase, inverting, parallel beta-helix, glycosidase; HET: NAG BMA MAN GLC; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3
Probab=99.81 E-value=8.9e-18 Score=164.97 Aligned_cols=169 Identities=12% Similarity=0.190 Sum_probs=143.2
Q ss_pred eEEEEeceecEEEEeEEEECCCCCCCCCceeeecceeEEEEecEEec----CCceEEeCCCCeeEEEEeeEEecCc-eeE
Q 043588 175 FHIVINGCKDVHIEGVTVIAPGNSPNTDGIHVQLSTNVKITNCTIKT----GDDCIPIGPGTKNLWIERVTCGPGH-GIS 249 (397)
Q Consensus 175 ~~i~~~~~~nv~i~n~~i~~~~~~~~~DGi~~~~s~nv~I~n~~i~~----~dD~i~i~~~s~nv~i~n~~~~~~~-gi~ 249 (397)
..+++..|+|++|+++++.++ ..++|++..|+||+|+|++|.+ +.|+|.+.+ +||+|+||++..++ +++
T Consensus 128 ~~i~~~~~~nv~I~~iti~ns----p~~~i~i~~~~nv~I~n~~I~~~d~~ntDGidi~~--~nV~I~n~~i~~gDD~Ia 201 (422)
T 1rmg_A 128 RILRLTDVTHFSVHDIILVDA----PAFHFTMDTCSDGEVYNMAIRGGNEGGLDGIDVWG--SNIWVHDVEVTNKDECVT 201 (422)
T ss_dssp EEEEEEEEEEEEEEEEEEECC----SSCSEEEEEEEEEEEEEEEEECCSSTTCCSEEEEE--EEEEEEEEEEESSSEEEE
T ss_pred eEEEEcccceEEEECeEEECC----CceEEEEeCcCCEEEEeEEEECCCCCCCccEeecC--CeEEEEeeEEeCCCCeEE
Confidence 468899999999999999985 3468999999999999999997 468999987 99999999999886 599
Q ss_pred EeeecccCCcCCEEEEEEEeeEEeCCcceEEEEeecCCCCceEEceEEEEEEEecCcccEEEeeecCCCCCCCCCCccce
Q 043588 250 IGSLAKDLIEEGVQNVTVFKTVFTGTTNGFRIKSWARPSNGFVQGVSFIDAIMRNVQFPIVIDQNYCPHNLNCPGQVSGV 329 (397)
Q Consensus 250 igs~~~~~~~~~v~nI~i~n~~~~~~~~gi~i~~~~~~~~g~i~ni~~~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~~ 329 (397)
|++ ..+||+|+||++... +|+.|++.. ..+.++||+|+|+++.+..++++|+.. . ..+
T Consensus 202 i~s--------~~~nI~I~n~~~~~~-~GisIGS~g--~~~~v~nV~v~n~~~~~~~~Gi~Ikt~-~----------g~G 259 (422)
T 1rmg_A 202 VKS--------PANNILVESIYCNWS-GGCAMGSLG--ADTDVTDIVYRNVYTWSSNQMYMIKSN-G----------GSG 259 (422)
T ss_dssp EEE--------EEEEEEEEEEEEESS-SEEEEEEEC--TTEEEEEEEEEEEEEESSSCSEEEEEB-B----------CCE
T ss_pred eCC--------CCcCEEEEeEEEcCC-cceeecccC--CCCcEEEEEEEeEEEeccceEEEEEec-C----------CCc
Confidence 986 468999999999886 699999863 357899999999999999999999973 1 124
Q ss_pred EEEeEEEEeEEEeeCCCceEEEee---------cCCCceecEEEEeEEEEeC
Q 043588 330 KINDITYQDIRGTSATPIAIKFDC---------STKYPCQGIKLQNINLRHL 372 (397)
Q Consensus 330 ~i~nI~f~ni~~~~~~~~~~~i~~---------~~~~~i~ni~~~ni~i~~~ 372 (397)
.++||+|+||++..... ++.++. .+..+++||+|+||+.+..
T Consensus 260 ~v~nI~~~NI~~~~v~~-~i~i~~~y~~~~~~~~~~~~i~nI~~~nI~gt~~ 310 (422)
T 1rmg_A 260 TVSNVLLENFIGHGNAY-SLDIDGYWSSMTAVAGDGVQLNNITVKNWKGTEA 310 (422)
T ss_dssp EEEEEEEEEEEEEEESC-SEEEETBCTTSCCBSSSCCEEEEEEEEEEEEEES
T ss_pred EEEEEEEEeEEEECccc-cEEEEeeccCCCcccCCCceEEEEEEEeEEEEec
Confidence 89999999999987643 676652 1356899999999999975
No 30
>1x0c_A Isopullulanase; glycoside hydrolase family 49, glycoprotein, hydro; HET: NAG; 1.70A {Aspergillus niger} PDB: 1wmr_A* 2z8g_A*
Probab=99.79 E-value=7.4e-18 Score=169.97 Aligned_cols=249 Identities=14% Similarity=0.174 Sum_probs=170.6
Q ss_pred CCCcE-EEEcCceEEeeceeeeccCCCcceEEEEccEEEeeccc------cccCC----CcceEEE------ecccceEE
Q 043588 63 TESAT-INVPKGRYLLGSVAFKGDCKSSDITFRIDGTLVAPADY------RVLGQ----ADNWLSF------EGVSGVSI 125 (397)
Q Consensus 63 ~~g~~-v~ip~G~Y~~~~~~l~~~~~s~~~~l~~~G~l~~~~~~------~~~~~----~~~~i~~------~~~~ni~I 125 (397)
..+.+ ||+++|.|+.+++.+.+.+ . |++|.+.|+|...... ..|.. ....+.+ .+++||.|
T Consensus 220 ~s~~~~L~l~~GA~L~gs~~~~~~~-~-nv~ItG~GtIDG~G~~ww~~~~~~~~~~~~~rp~~i~~~~~~~~~~c~nV~I 297 (549)
T 1x0c_A 220 SSSVTWVYFAPGAYVKGAVEFLSTA-S-EVKASGHGVLSGEQYVWYADPDEGYQKASGANNNGLRMWRGTLGNSSQTFVL 297 (549)
T ss_dssp CTTCCEEEECTTEEEESCEEECCCS-S-EEEEESSCEEECTTSCTTEEGGGTTEECGGGCSCCCCSEEEECCSSCEEEEE
T ss_pred cCCCCeEecCCCCEEEEEEEEecCc-e-eEEEEeeEEEECCCceecccCcccccccccCCCceEEEeeccccCCceEEEE
Confidence 34566 9999999998888776332 4 8999998998765321 12211 0112333 78999999
Q ss_pred Ec-eeeeCCCCcccccccCCCCCCCCceeEEEE-cc-CC--eEEEeeEEecCc---ceEEEEeceecEEEEeEEEECCCC
Q 043588 126 IG-GALDAKGSSLWACKASGANCPDGATTLRFT-NS-NN--IRINGLLSLNSQ---MFHIVINGCKDVHIEGVTVIAPGN 197 (397)
Q Consensus 126 ~G-G~idg~g~~~w~~~~~~~~~~~~~~~i~~~-~~-~n--v~i~~v~i~~~~---~~~i~~~~~~nv~i~n~~i~~~~~ 197 (397)
+| .+.+. ++| .+++. .| ++ ++|+++++.+++ .+++++. +||+|+||+|.+.
T Consensus 298 ~Giti~Ns---p~w--------------~i~i~~~~~~ni~V~I~n~~i~~~~~~NTDGidi~--~nV~I~n~~i~~g-- 356 (549)
T 1x0c_A 298 NGVTVSAP---PFN--------------SMDWSGNSLDLITCRVDDYKQVGAFYGQTDGLEMY--PGTILQDVFYHTD-- 356 (549)
T ss_dssp ESCEEECC---SSC--------------SEEEECSCGGGEEEEEEEEEEECCCBTTCCCCBCC--TTCEEEEEEEEES--
T ss_pred ECcEEECC---Cce--------------eEEeeccCCCCCeEEEEeeEeEcCCCCCCCccccc--CCEEEEeeEEeCC--
Confidence 99 55542 344 26644 45 69 999999997643 3578888 9999999999984
Q ss_pred CCCCCceeeecceeEEEEecEEecCC-ce-EEeCC---CCeeEEEEeeEEecCc-------eeEEeeeccc--C------
Q 043588 198 SPNTDGIHVQLSTNVKITNCTIKTGD-DC-IPIGP---GTKNLWIERVTCGPGH-------GISIGSLAKD--L------ 257 (397)
Q Consensus 198 ~~~~DGi~~~~s~nv~I~n~~i~~~d-D~-i~i~~---~s~nv~i~n~~~~~~~-------gi~igs~~~~--~------ 257 (397)
.|+|.+.+ +||+|+||++..+. .+ |.+++ ..+||+|+||++.++. |..|++...+ .
T Consensus 357 ---DDcIaIks-~NI~I~n~~~~~~~g~~~IsiGs~~~~V~NV~v~n~~i~~s~~~k~~~~g~iI~~~~~~~~g~~~~~~ 432 (549)
T 1x0c_A 357 ---DDGLKMYY-SNVTARNIVMWKESVAPVVEFGWTPRNTENVLFDNVDVIHQAYANAGNNPGIFGAVNNYLYAPDGLSS 432 (549)
T ss_dssp ---SCCEECCS-SSEEEEEEEEEECSSSCSEECCBSCCCEEEEEEEEEEEEECCCCSGGGCCCSEEECCBTTTCTTSCCS
T ss_pred ---CCEEEECC-CCEEEEeeEEEcCCCCceEEECCCCCcEEEEEEEeeEEECccccccccceEEEecccccccCccccCc
Confidence 46898877 99999999998754 35 88875 4799999999997653 4336552111 1
Q ss_pred C-cCCEEEEEEEeeEEeCCc-ceEEEEeecCCCCceEEceEEEEEEEecCc-----c-cEEEeeecCCCCCCCCCCccce
Q 043588 258 I-EEGVQNVTVFKTVFTGTT-NGFRIKSWARPSNGFVQGVSFIDAIMRNVQ-----F-PIVIDQNYCPHNLNCPGQVSGV 329 (397)
Q Consensus 258 ~-~~~v~nI~i~n~~~~~~~-~gi~i~~~~~~~~g~i~ni~~~ni~~~~~~-----~-~i~i~~~~~~~~~~~~~~~~~~ 329 (397)
+ .+.++||+|+|++|.+.. .|+.+....+..++.++||+|+|+++++.. . +..+.. +..- .|+ ...
T Consensus 433 d~~G~i~nI~f~NI~i~nv~~~g~~~~~~~g~pg~~I~nI~i~NI~i~~~~~~~~~~~~~~i~G-~~~~--~~~---~~~ 506 (549)
T 1x0c_A 433 NHSTGNSNMTVRNITWSNFRAEGSSSALFRINPIQNLDNISIKNVSIESFEPLSINTTESWMPV-WYDL--NNG---KQI 506 (549)
T ss_dssp CCCCBEEEEEEEEEEEEEEEEEEEECCSEEECCSEEEEEEEEEEEEEEEECCGGGTCSCEEECC-CBBT--TTC---CBC
T ss_pred CCCceEccEEEEeEEEEeEEEeceEEeeecCCCCCcCccEEEEEEEEEccccccccccceEEeC-CCcc--ccc---cce
Confidence 2 457999999999998865 554432222224457999999999998765 2 223332 2110 011 124
Q ss_pred EEEeEEEEeEEEeeC
Q 043588 330 KINDITYQDIRGTSA 344 (397)
Q Consensus 330 ~i~nI~f~ni~~~~~ 344 (397)
+++||+|+||++.+.
T Consensus 507 ~v~nI~f~NV~i~G~ 521 (549)
T 1x0c_A 507 TVTDFSIEGFTVGNT 521 (549)
T ss_dssp CEEEEEEEEEEETTE
T ss_pred eeeeEEEEeEEEeCe
Confidence 799999999988654
No 31
>1ogo_X Dextranase; hydrolase, dextran degradation, glycosidase; HET: BGC GLC; 1.65A {Penicillium minioluteum} SCOP: b.133.1.1 b.80.1.10 PDB: 1ogm_X*
Probab=99.78 E-value=1.7e-17 Score=167.33 Aligned_cols=234 Identities=12% Similarity=0.097 Sum_probs=167.6
Q ss_pred CCcE-EEEcCceEEeeceeeeccCCCcceEEEEccEEEeeccc------cccCC---CcceEEEe------cccceEEEc
Q 043588 64 ESAT-INVPKGRYLLGSVAFKGDCKSSDITFRIDGTLVAPADY------RVLGQ---ADNWLSFE------GVSGVSIIG 127 (397)
Q Consensus 64 ~g~~-v~ip~G~Y~~~~~~l~~~~~s~~~~l~~~G~l~~~~~~------~~~~~---~~~~i~~~------~~~ni~I~G 127 (397)
.+-+ |++++|.++.+.+.+++. . |++|.+.|+|...... ..|+. ....+.+. +++||.|+|
T Consensus 263 Snvt~L~L~~GA~l~g~i~~~~~--~-nv~ItG~GtIDG~G~~ww~~~~~~~~~~~~rp~~i~~~~~~~~~~c~NV~I~G 339 (574)
T 1ogo_X 263 SNTYWVYLAPGAYVKGAIEYFTK--Q-NFYATGHGILSGENYVYQANAGDNYIAVKSDSTSLRMWWHNNLGGGQTWYCVG 339 (574)
T ss_dssp TTCCEEEECTTEEEESCEEECCS--S-CEEEESSCEEECTTSCTTCBTTTTTBSCCCTTTBCCSEEECSCCSSEEEEEES
T ss_pred CCCceEEecCCcEEEccEEEeCc--e-eEEEEeCEEEeCCCcccccccccccccccCCcceEEEEeccccCCceeEEEEC
Confidence 3456 999999999998888764 5 9999999998654211 11111 01123333 899999999
Q ss_pred -eeeeCCCCcccccccCCCCCCCCceeEEEEccCCe--EEEeeEEecCc---ceEEEEeceecEEEEeEEEECCCCCCCC
Q 043588 128 -GALDAKGSSLWACKASGANCPDGATTLRFTNSNNI--RINGLLSLNSQ---MFHIVINGCKDVHIEGVTVIAPGNSPNT 201 (397)
Q Consensus 128 -G~idg~g~~~w~~~~~~~~~~~~~~~i~~~~~~nv--~i~~v~i~~~~---~~~i~~~~~~nv~i~n~~i~~~~~~~~~ 201 (397)
.+.+. ++| .+++.+|+|+ +|+++++.+++ .++|++. +||+|+||+|.+. .
T Consensus 340 iti~NS---p~w--------------~i~~~~c~nV~~~I~nv~i~~~~~~nTDGIDi~--~NV~I~nc~I~~g-----D 395 (574)
T 1ogo_X 340 PTINAP---PFN--------------TMDFNGNSGISSQISDYKQVGAFFFQTDGPEIY--PNSVVHDVFWHVN-----D 395 (574)
T ss_dssp CEEECC---SSC--------------SEEECSSSCEEEEEEEEEEECCCSTTCCCCBCC--TTCEEEEEEEEES-----S
T ss_pred eEEECC---CCc--------------EEeecCCCChhhEEEeeEeeCCCCCCCccCccc--CCEEEEeeEEECC-----C
Confidence 66652 334 3889999999 99999988754 4588888 9999999999984 4
Q ss_pred CceeeecceeEEEEecEEecCCc-e-EEeCC---CCeeEEEEeeEEecCc---------eeEEeeecccC-------CcC
Q 043588 202 DGIHVQLSTNVKITNCTIKTGDD-C-IPIGP---GTKNLWIERVTCGPGH---------GISIGSLAKDL-------IEE 260 (397)
Q Consensus 202 DGi~~~~s~nv~I~n~~i~~~dD-~-i~i~~---~s~nv~i~n~~~~~~~---------gi~igs~~~~~-------~~~ 260 (397)
|+|.+.+ +||+|+||++..+.. + |.+++ ..+||+|+||++.... +..+|++..+. ..+
T Consensus 396 DcIaIks-~NI~I~nc~i~~g~g~g~IsIGS~~g~V~NV~v~N~~i~~~~~~~~~~~~~g~iiGs~~~y~~~~~~~~g~g 474 (574)
T 1ogo_X 396 DAIKIYY-SGASVSRATIWKCHNDPIIQMGWTSRDISGVTIDTLNVIHTRYIKSETVVPSAIIGASPFYASGMSPDSRKS 474 (574)
T ss_dssp CSEECCS-TTCEEEEEEEEECSSSCSEECCSSCCCEEEEEEEEEEEEECCCSSCCTTTTCEEEEECCCSSSSCCCEEEEE
T ss_pred CEEEECC-ccEEEEeEEEECCCCCceEEEcCCCCcEEEEEEEeEEEECCcccceeccccceeeccccccccccccCCCce
Confidence 7898876 999999999998653 4 88885 4799999999997643 33344432110 112
Q ss_pred CEEEEEEEeeEEeCCcceEEEEeecCCCCceEEceEEEEEEEec------Ccc-cEEEeeecCCCCCCCCCCccceEEEe
Q 043588 261 GVQNVTVFKTVFTGTTNGFRIKSWARPSNGFVQGVSFIDAIMRN------VQF-PIVIDQNYCPHNLNCPGQVSGVKIND 333 (397)
Q Consensus 261 ~v~nI~i~n~~~~~~~~gi~i~~~~~~~~g~i~ni~~~ni~~~~------~~~-~i~i~~~~~~~~~~~~~~~~~~~i~n 333 (397)
+ ||+|+|++|.+...++ +... ..+.++||+|+|+++.+ ... +..+... . .+++|
T Consensus 475 -V-NI~f~NI~~~~v~~~i-i~i~---p~~~I~nI~~~NI~i~g~~~~~~~~~~~~~i~G~------------~-~~v~n 535 (574)
T 1ogo_X 475 -I-SMTVSNVVCEGLCPSL-FRIT---PLQNYKNFVVKNVAFPDGLQTNSIGTGESIIPAA------------S-GLTMG 535 (574)
T ss_dssp -E-EEEEEEEEECSSBCEE-EEEC---CSEEEEEEEEEEEEETTCBCCSTTCTTCEEECCC------------T-TCCEE
T ss_pred -E-EEEEEeEEEEceeEee-EEEC---CCCCEEEEEEEeEEEeCccccccccccceeEecC------------C-Cccce
Confidence 8 9999999999987775 4432 35689999999999986 221 1122111 1 36799
Q ss_pred EEEEeEEEeeC
Q 043588 334 ITYQDIRGTSA 344 (397)
Q Consensus 334 I~f~ni~~~~~ 344 (397)
|+|+||++...
T Consensus 536 I~~~NV~i~g~ 546 (574)
T 1ogo_X 536 LAISAWTIGGQ 546 (574)
T ss_dssp EEEEEEEETTE
T ss_pred EEEEeEEEeCE
Confidence 99999998553
No 32
>2inu_A Insulin fructotransferase; right-handed parallel beta-helix, lyase; 1.80A {Bacillus SP} PDB: 2inv_A*
Probab=99.66 E-value=1.6e-15 Score=144.11 Aligned_cols=225 Identities=15% Similarity=0.192 Sum_probs=160.2
Q ss_pred cCceeEEeecc----CccCCCCcchHHHHHHHHHHhhc------cCCCcEEEEcCceEEe-eceeeeccCCCcceEEEEc
Q 043588 28 ATTTTYNVLSF----GAKGNGVTDSTQAFAKAWDAACT------STESATINVPKGRYLL-GSVAFKGDCKSSDITFRID 96 (397)
Q Consensus 28 ~~~~~~~v~d~----GA~~dg~tddt~aiq~Ai~~a~~------~~~g~~v~ip~G~Y~~-~~~~l~~~~~s~~~~l~~~ 96 (397)
+....++|++| +|++++.+|++++|+++|.+..+ ..+|++|+||||+|.+ +++.+.. + .++|.++
T Consensus 10 ~~~~~~~vt~~~~~~~~~~~~~~d~~~~i~~~ia~~~~~~~~~~A~pGdvI~L~~G~Y~l~g~ivIdk---p-~LtL~G~ 85 (410)
T 2inu_A 10 NSPNTYDVTTWRIKAHPEVTAQSDIGAVINDIIADIKQRQTSPDARPGAAIIIPPGDYDLHTQVVVDV---S-YLTIAGF 85 (410)
T ss_dssp --CCEEETTTCCBTTBTTCCHHHHHHHHHHHHHHHHHHHCCCTTSCCCEEEECCSEEEEECSCEEECC---T-TEEEECS
T ss_pred ccCceEEEEEecccCCCcCCCchhHHHHHHHHHHHhhcccccccCCCCCEEEECCCeeccCCcEEEec---C-cEEEEec
Confidence 44679999999 89999999999999999977633 3689999999999985 7888862 3 5999986
Q ss_pred c--E----EEeeccccc----cCCCcceEEEecc-----------------cceEEEceeeeCC-----CCcccccccCC
Q 043588 97 G--T----LVAPADYRV----LGQADNWLSFEGV-----------------SGVSIIGGALDAK-----GSSLWACKASG 144 (397)
Q Consensus 97 G--~----l~~~~~~~~----~~~~~~~i~~~~~-----------------~ni~I~GG~idg~-----g~~~w~~~~~~ 144 (397)
+ . |........ |+. +..+.+... ++|++.|-+|+|- |..+
T Consensus 86 ~~g~~s~~Id~~~~~~g~~~~~g~-Gs~I~V~a~~~~g~a~~V~~~g~~r~s~V~~~~v~I~G~~~~~~G~s~------- 157 (410)
T 2inu_A 86 GHGFFSRSILDNSNPTGWQNLQPG-ASHIRVLTSPSAPQAFLVKRAGDPRLSGIVFRDFCLDGVGFTPGKNSY------- 157 (410)
T ss_dssp CCCCCCHHHHHTSCCTTCSCCSCC-SEEEEECCCTTSCEEEEECCCSSSCEECCEEESCEEECCCCSSSTTSC-------
T ss_pred CCCcceeEEecccccCcccccCCC-CcEEEEeccccccceeEEeeccCcccCCcEECCEEEECCEeecCCCCc-------
Confidence 4 3 321100112 221 222333222 6666666555544 4322
Q ss_pred CCCCCCceeEEEEc-cCCeEEEeeEEecCcceEEEEeceecEEEEeEEEECCCCCCCCCceeeec-ceeEEEEecEEecC
Q 043588 145 ANCPDGATTLRFTN-SNNIRINGLLSLNSQMFHIVINGCKDVHIEGVTVIAPGNSPNTDGIHVQL-STNVKITNCTIKTG 222 (397)
Q Consensus 145 ~~~~~~~~~i~~~~-~~nv~i~~v~i~~~~~~~i~~~~~~nv~i~n~~i~~~~~~~~~DGi~~~~-s~nv~I~n~~i~~~ 222 (397)
......|.+.. .++++|+++.+.+. .+++.+..+++.+|++.+|.. ...||++++ ++...|+++.+..+
T Consensus 158 ---~~~dAGI~v~~~~d~~~I~nn~i~~~-~fGI~l~~a~~~~I~~N~I~e-----~GNgI~L~G~~~~~~I~~N~i~~~ 228 (410)
T 2inu_A 158 ---HNGKTGIEVASDNDSFHITGMGFVYL-EHALIVRGADALRVNDNMIAE-----CGNCVELTGAGQATIVSGNHMGAG 228 (410)
T ss_dssp ---CCSCEEEEECSCEESCEEESCEEESC-SEEEEETTEESCEEESCEEES-----SSEEEEECSCEESCEEESCEEECC
T ss_pred ---ccCceeEEEeccCCeEEEECCEEecc-cEEEEEccCCCcEEECCEEEe-----cCCceeeccccccceEecceeeec
Confidence 22344677775 88999999999776 699999999999999999995 346788888 88888889998888
Q ss_pred Cce--EEeCCCCeeEEEEeeEEec-C-ceeEEeeecccCCcCCEEEEEEEeeEEeCCcceEEEEe
Q 043588 223 DDC--IPIGPGTKNLWIERVTCGP-G-HGISIGSLAKDLIEEGVQNVTVFKTVFTGTTNGFRIKS 283 (397)
Q Consensus 223 dD~--i~i~~~s~nv~i~n~~~~~-~-~gi~igs~~~~~~~~~v~nI~i~n~~~~~~~~gi~i~~ 283 (397)
+|| |.++. +++.+|+++.+.. + .|+.+- ...+..|+++++.+...|+.+..
T Consensus 229 ~dG~gIyl~n-s~~~~I~~N~i~~~~R~gIh~m---------~s~~~~i~~N~f~~~~~Gi~~M~ 283 (410)
T 2inu_A 229 PDGVTLLAEN-HEGLLVTGNNLFPRGRSLIEFT---------GCNRCSVTSNRLQGFYPGMLRLL 283 (410)
T ss_dssp TTSEEEEEES-EESCEEESCEECSCSSEEEEEE---------SCBSCEEESCEEEESSSCSEEEE
T ss_pred CCCCEEEEEe-CCCCEEECCCcccCcceEEEEE---------ccCCCEEECCEEecceeEEEEEE
Confidence 777 77766 7888888887633 4 466652 23456788888888777876654
No 33
>3gq8_A Preneck appendage protein; beta helix, viral protein; HET: NHE; 2.00A {Bacillus phage PHI29} PDB: 3gq7_A* 3gq9_A* 3gqa_A
Probab=99.50 E-value=9.5e-12 Score=124.66 Aligned_cols=220 Identities=14% Similarity=0.153 Sum_probs=146.1
Q ss_pred ceEEEecccceEEEceeeeCCCCcccccccCCCCCCCCceeEEEEccCCeEEEeeEEecCcceEEEEec------eecEE
Q 043588 113 NWLSFEGVSGVSIIGGALDAKGSSLWACKASGANCPDGATTLRFTNSNNIRINGLLSLNSQMFHIVING------CKDVH 186 (397)
Q Consensus 113 ~~i~~~~~~ni~I~GG~idg~g~~~w~~~~~~~~~~~~~~~i~~~~~~nv~i~~v~i~~~~~~~i~~~~------~~nv~ 186 (397)
.++.+..++|++|++-++..... ..+.+....+ + ++++++. |+||+
T Consensus 135 ~lI~f~~c~NV~I~gVti~NSp~----------------~gI~I~~~~~---------N---DGid~DGi~fd~~S~NV~ 186 (609)
T 3gq8_A 135 SNLSIRACHNVYIRDIEAVDCTL----------------HGIDITCGGL---------D---YPYLGDGTTAPNPSENIW 186 (609)
T ss_dssp CSEEEESCEEEEEEEEEEESCSS----------------CSEEEECSSS---------S---CCCCCTTCCCSSCCEEEE
T ss_pred cEEEEEeeceEEEEeeEEEeCCC----------------CCeEEeCCCC---------C---ccccCCCccccccceeEE
Confidence 46888899999999944421110 0133332221 1 4455555 99999
Q ss_pred EEeEEEECCCCCCCCCceeeecceeEEEEecEEecC-----CceEEeCCCCeeEEEEeeEEecC-ceeEEeeecccCCcC
Q 043588 187 IEGVTVIAPGNSPNTDGIHVQLSTNVKITNCTIKTG-----DDCIPIGPGTKNLWIERVTCGPG-HGISIGSLAKDLIEE 260 (397)
Q Consensus 187 i~n~~i~~~~~~~~~DGi~~~~s~nv~I~n~~i~~~-----dD~i~i~~~s~nv~i~n~~~~~~-~gi~igs~~~~~~~~ 260 (397)
|+||+|.+. ..|||.+.+|+||+|+||++... ..+|.++++++||+|+||++.++ .|++|++.+ +.+
T Consensus 187 I~Nc~I~~t----GDDcIaIksseNI~I~Nc~~~gp~G~S~~~GIsIGsgs~NVtV~Nc~i~nt~~GIrIKt~~---~~~ 259 (609)
T 3gq8_A 187 IENCEATGF----GDDGITTHHSQYINILNCYSHDPRLTANCNGFEIDDGSRHVVLSNNRSKGCYGGIEIKAHG---DAP 259 (609)
T ss_dssp EESCEEESC----SSCSEEECSCEEEEEESCEEECCSSCSSCCSEEECTTCEEEEEESEEEESSSEEEEEEECT---TSC
T ss_pred EEeeEEEec----CCCEEEecCCeeEEEEeEEEECCCCCCCcccEEccCCcccEEEEeeEEECCCCEEEEEecC---CCC
Confidence 999999863 45899999999999999999543 57999998899999999999987 589999864 245
Q ss_pred CEEEEEEEeeEEeCCcceEEEEeecC-----CCCceEEceEEEEEEEecCc-c----------cEEEeee----------
Q 043588 261 GVQNVTVFKTVFTGTTNGFRIKSWAR-----PSNGFVQGVSFIDAIMRNVQ-F----------PIVIDQN---------- 314 (397)
Q Consensus 261 ~v~nI~i~n~~~~~~~~gi~i~~~~~-----~~~g~i~ni~~~ni~~~~~~-~----------~i~i~~~---------- 314 (397)
.++||+|+|+...+.-..+.+..... +.....+||++.|++..... . ++.+..+
T Consensus 260 ~v~NV~I~n~vs~~nvrsyn~r~iG~~~a~dp~s~~a~nV~l~n~~~~~p~~~~~~y~~~~~r~l~vs~~~~v~i~~~~~ 339 (609)
T 3gq8_A 260 AAYNISINGHMSVEDVRSYNFRHIGHHAATAPQSVSAKNIVASNLVSIRPNNKRGFQDNATPRVLAVSAYYGVVINGLTG 339 (609)
T ss_dssp CCEEEEEEEEEEESCSEEEEEEETTSCSTTSCCCSSCEEEEEEEEEEESCCCTTCHHHHCCCEEEEEESCEEEEEEEEEE
T ss_pred ccccEEEECCEeecCceEecceEEccccCCCCCcceecceEeecceEEeecccCceeeCCCcceEEEEcCCCeEEcCceE
Confidence 79999999987766544333332211 13346789999999886543 1 2333221
Q ss_pred c-CCCCCCCCCCccceE----EEeEEEEeEEEeeCC--CceEEEeecCCCceecEEEEeEEEEe
Q 043588 315 Y-CPHNLNCPGQVSGVK----INDITYQDIRGTSAT--PIAIKFDCSTKYPCQGIKLQNINLRH 371 (397)
Q Consensus 315 ~-~~~~~~~~~~~~~~~----i~nI~f~ni~~~~~~--~~~~~i~~~~~~~i~ni~~~ni~i~~ 371 (397)
+ ++.+. .. .+... -+|++|.+|.+++-. ...+++.|.+ ..+..|++.|+++..
T Consensus 340 ~~d~~y~--~~-~~~~~~q~~~~~~~l~~~~i~gf~~a~~~i~~~gg~-~~~~~v~i~n~~i~~ 399 (609)
T 3gq8_A 340 YTDDPNL--LT-ETVVSVQFRARNCSLNGVVLTGFSNSENGIYVIGGS-RGGDAVNISNVTLNN 399 (609)
T ss_dssp ECSCTTS--CC-SEEEEEETTCEEEEEEEEEEESCTTCSEEEEECCCC-CTTCCEEEEEEEEES
T ss_pred ccCCccc--cC-CceEEEEEecceeEEcceEEecccCCCCCeEEeCCC-CcCCeEEEeccEEee
Confidence 1 11111 11 12222 379999999988743 4567776654 456667777777663
No 34
>3gqn_A Preneck appendage protein; beta helix, beta barrel, ATP binding, viral protein; HET: ATP; 2.15A {Bacillus phage PHI29} PDB: 3suc_A*
Probab=99.47 E-value=1.5e-11 Score=125.31 Aligned_cols=220 Identities=14% Similarity=0.153 Sum_probs=142.6
Q ss_pred ceEEEecccceEEEceeeeCCCCcccccccCCCCCCCCceeEEEEccCCeEEEeeEEecCcceEEEEec------eecEE
Q 043588 113 NWLSFEGVSGVSIIGGALDAKGSSLWACKASGANCPDGATTLRFTNSNNIRINGLLSLNSQMFHIVING------CKDVH 186 (397)
Q Consensus 113 ~~i~~~~~~ni~I~GG~idg~g~~~w~~~~~~~~~~~~~~~i~~~~~~nv~i~~v~i~~~~~~~i~~~~------~~nv~ 186 (397)
.++.+..++|++|++-++..... ..+.+....+ | .+++++. |+||+
T Consensus 135 ~lI~f~~ckNV~I~gVti~NSp~----------------~gI~I~np~~---------N---DGid~DGi~fdi~S~NV~ 186 (772)
T 3gqn_A 135 SNLSIRACHNVYIRDIEAVDCTL----------------HGIDITCGGL---------D---YPYLGDGTTAPNPSENIW 186 (772)
T ss_dssp CSEEEESCEEEEEEEEEEESCSS----------------CSEEEECSSS---------S---CCCCCTTCCCSSCCEEEE
T ss_pred cEEEEEeeceEEEEeEEEEeCCC----------------CCEEEeCCCc---------C---CcCCCcCcccccccceEE
Confidence 46889899999999944421110 0122222221 1 4455555 99999
Q ss_pred EEeEEEECCCCCCCCCceeeecceeEEEEecEEecC-----CceEEeCCCCeeEEEEeeEEecC-ceeEEeeecccCCcC
Q 043588 187 IEGVTVIAPGNSPNTDGIHVQLSTNVKITNCTIKTG-----DDCIPIGPGTKNLWIERVTCGPG-HGISIGSLAKDLIEE 260 (397)
Q Consensus 187 i~n~~i~~~~~~~~~DGi~~~~s~nv~I~n~~i~~~-----dD~i~i~~~s~nv~i~n~~~~~~-~gi~igs~~~~~~~~ 260 (397)
|+||+|.+. ..|+|.+.+|+||+|+||++... ..+|.++++++||+|+||++.++ .|++|++.+ +.+
T Consensus 187 I~Nc~I~nt----GDDcIAIksSeNI~I~Nc~c~gphG~S~~~GIsIGsgs~NVtV~Nc~~~nT~nGIRIKt~~---~gg 259 (772)
T 3gqn_A 187 IENCEATGF----GDDGITTHHSQYINILNCYSHDPRLTANCNGFEIDDGSRHVVLSNNRSKGCYGGIEIKAHG---DAP 259 (772)
T ss_dssp EESCEEESC----SSCSEEECSCEEEEEESCEEECCSSSSSCCSEEECTTCEEEEEEEEEEESSSEEEEECCCT---TSC
T ss_pred EEeeEEEec----CcCeEEecCCceEEEEeEEEECCCCCCCcccEEecCCcccEEEEceEEECCCcEEEEEEeC---CCC
Confidence 999999873 45899999999999999999553 57999999899999999999987 589999764 345
Q ss_pred CEEEEEEEeeEEeCCcceEEEEeecC-----CCCceEEceEEEEEEEecCc-c----------cEEEeee----------
Q 043588 261 GVQNVTVFKTVFTGTTNGFRIKSWAR-----PSNGFVQGVSFIDAIMRNVQ-F----------PIVIDQN---------- 314 (397)
Q Consensus 261 ~v~nI~i~n~~~~~~~~gi~i~~~~~-----~~~g~i~ni~~~ni~~~~~~-~----------~i~i~~~---------- 314 (397)
.++||+|.++...+....+.+..... +..-...||.+.|++..... + ++.+..+
T Consensus 260 ~v~NV~I~gnis~~dvrsynir~iG~h~a~dp~s~~a~nV~l~n~~~~~P~~~~~ly~~~~praL~vsay~~v~i~~~~~ 339 (772)
T 3gqn_A 260 AAYNISINGHMSVEDVRSYNFRHIGHHAATAPQSVSAKNIVASNLVSIRPNNKRGFQDNATPRVLAVSAYYGVVINGLTG 339 (772)
T ss_dssp CCEEEEEEEEEEESCSEEEEECCTTSCSSSSCCCSSCEEEEEEEEEEESCCCSSCHHHHCCCEEEEEESCEEEEEEEEEE
T ss_pred ccccEEEECCEEeccCeEecceEEccccCCCCCCccCccEEeecceEEcccccCceeeCCCcceEEEEcCCCcEecCcee
Confidence 79999999866654433222321111 11225788889988886543 1 2333211
Q ss_pred c-CCCCCCCCCCccceE----EEeEEEEeEEEeeCC--CceEEEeecCCCceecEEEEeEEEEe
Q 043588 315 Y-CPHNLNCPGQVSGVK----INDITYQDIRGTSAT--PIAIKFDCSTKYPCQGIKLQNINLRH 371 (397)
Q Consensus 315 ~-~~~~~~~~~~~~~~~----i~nI~f~ni~~~~~~--~~~~~i~~~~~~~i~ni~~~ni~i~~ 371 (397)
+ .+.+. .. .+... -+|++|++|.+++-. ...+++.|.+ ..+..|++.|++|..
T Consensus 340 igd~~y~--~~-~~~i~~q~~~~~~~ln~i~i~gf~~a~~~i~v~gg~-~~~~~v~i~n~~i~~ 399 (772)
T 3gqn_A 340 YTDDPNL--LT-ETVVSVQFRARNCSLNGVVLTGFSNSENGIYVIGGS-RGGDAVNISNVTLNN 399 (772)
T ss_dssp ECSCTTS--CC-SEEEEEETTCEEEEEEEEEEESCTTCSEEEEECCST-TCCEEEEEEEEEEES
T ss_pred ccCcccc--cC-CceEEEEEecceeEEcceEEecccCCCCCeEEeCCC-CCCCeEEEeccEEee
Confidence 1 11111 01 12222 379999999988743 4467776654 456667777777664
No 35
>1ru4_A Pectate lyase, PEL9A; parallel beta-helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.9
Probab=99.43 E-value=1.1e-11 Score=120.58 Aligned_cols=252 Identities=17% Similarity=0.157 Sum_probs=166.1
Q ss_pred hccccCceeEEeeccCcc-CCCCcchHH-HHHHHHHHhhccCCCcEEEEcCceEE--e-----eceeeeccCCC----cc
Q 043588 24 ASSYATTTTYNVLSFGAK-GNGVTDSTQ-AFAKAWDAACTSTESATINVPKGRYL--L-----GSVAFKGDCKS----SD 90 (397)
Q Consensus 24 ~~~~~~~~~~~v~d~GA~-~dg~tddt~-aiq~Ai~~a~~~~~g~~v~ip~G~Y~--~-----~~~~l~~~~~s----~~ 90 (397)
++..+.+.++.|.--|-. ++|.+.+.+ .||+|++.| .+|.+|+|.+|+|. + ..+.+.. + ..
T Consensus 8 ~s~~~~~~~~yVsp~Gsd~~~G~t~~~P~tiq~Ai~~a---~pGdtI~l~~GtY~~~~~e~~~~~i~~~~---sGt~~~p 81 (400)
T 1ru4_A 8 TSGISTKRIYYVAPNGNSSNNGSSFNAPMSFSAAMAAV---NPGELILLKPGTYTIPYTQGKGNTITFNK---SGKDGAP 81 (400)
T ss_dssp TTTCCCSCEEEECTTCCTTCCSSSTTSCBCHHHHHHHC---CTTCEEEECSEEEECCCBTTBCCCEEECC---CCBTTBC
T ss_pred cccccCccEEEEcCCCCCCCCCccccCCccHHHHHhhC---CCCCEEEECCCeEccccccccceeEEecC---CCCCCCC
Confidence 344556778888755532 333122222 799999876 67899999999999 2 3455531 2 03
Q ss_pred eEEEEcc---EEEeecccc-ccCCCcceEEEecccceEEEceeeeCCCCcccccccCCCCCCCCceeEEEEccCCeEEEe
Q 043588 91 ITFRIDG---TLVAPADYR-VLGQADNWLSFEGVSGVSIIGGALDAKGSSLWACKASGANCPDGATTLRFTNSNNIRING 166 (397)
Q Consensus 91 ~~l~~~G---~l~~~~~~~-~~~~~~~~i~~~~~~ni~I~GG~idg~g~~~w~~~~~~~~~~~~~~~i~~~~~~nv~i~~ 166 (397)
++|+..+ .+....... .+.....-+.+ ..+.++|+|-++...+. ..|.+.. ++.+|++
T Consensus 82 Iti~~~~g~~~vI~~~~~~g~~~~~~~~i~i-~~~~~~i~gl~I~n~g~----------------~GI~v~g-s~~~i~n 143 (400)
T 1ru4_A 82 IYVAAANCGRAVFDFSFPDSQWVQASYGFYV-TGDYWYFKGVEVTRAGY----------------QGAYVIG-SHNTFEN 143 (400)
T ss_dssp EEEEEGGGCCEEEECCCCTTCCCTTCCSEEE-CSSCEEEESEEEESCSS----------------CSEEECS-SSCEEES
T ss_pred EEEEEecCCCCEEeCCccCCccccceeEEEE-ECCeEEEEeEEEEeCCC----------------CcEEEeC-CCcEEEe
Confidence 8888862 322221110 11100022455 46888888866643332 0366665 7889999
Q ss_pred eEEecCcceEEEEecee-cEEEEeEEEECCCC----CCCCCceeeecc--eeEEEEecEEec-CCceEEeCCCCeeEEEE
Q 043588 167 LLSLNSQMFHIVINGCK-DVHIEGVTVIAPGN----SPNTDGIHVQLS--TNVKITNCTIKT-GDDCIPIGPGTKNLWIE 238 (397)
Q Consensus 167 v~i~~~~~~~i~~~~~~-nv~i~n~~i~~~~~----~~~~DGi~~~~s--~nv~I~n~~i~~-~dD~i~i~~~s~nv~i~ 238 (397)
+++.+....+|.+.... +.+|+++++....+ +.+.|||.+..+ ++.+|++|.++. .||++.+......++|+
T Consensus 144 ~~i~~n~~~GI~l~~~~s~n~I~nn~i~~N~d~~~~g~~~dG~~~~~~~g~Gn~~~~~~~~~N~ddGidl~~~~~~v~i~ 223 (400)
T 1ru4_A 144 TAFHHNRNTGLEINNGGSYNTVINSDAYRNYDPKKNGSMADGFGPKQKQGPGNRFVGCRAWENSDDGFDLFDSPQKVVIE 223 (400)
T ss_dssp CEEESCSSCSEEECTTCCSCEEESCEEECCCCTTTTTSSCCSEEECTTCCSCCEEESCEEESCSSCSEECTTCCSCCEEE
T ss_pred EEEECCCceeEEEEcccCCeEEEceEEEcccCccccCcccceEEEEecccCCeEEECCEEeecCCCcEEEEecCCCEEEE
Confidence 99999887789988754 88999999997543 246799988743 788999999986 68999998767789999
Q ss_pred eeEEec--------------CceeEEeeecccCCcCCEEEEEEEeeEEeCC-cceEEEEeecCCCCceEEceEEEEEEEe
Q 043588 239 RVTCGP--------------GHGISIGSLAKDLIEEGVQNVTVFKTVFTGT-TNGFRIKSWARPSNGFVQGVSFIDAIMR 303 (397)
Q Consensus 239 n~~~~~--------------~~gi~igs~~~~~~~~~v~nI~i~n~~~~~~-~~gi~i~~~~~~~~g~i~ni~~~ni~~~ 303 (397)
||..+. +.|+.++.. ....+.+|+||...+. .+|+.....+ .+++++|+++.
T Consensus 224 nn~a~~Ng~~~~~~n~~~gngnGf~lgg~------~~~~~~~v~nn~a~~N~~~G~~~n~~~-------~~~~i~nNt~~ 290 (400)
T 1ru4_A 224 NSWAFRNGINYWNDSAFAGNGNGFKLGGN------QAVGNHRITRSVAFGNVSKGFDQNNNA-------GGVTVINNTSY 290 (400)
T ss_dssp SCEEESTTCCCSCCTTCCCCCCSEECCCT------TCCCCCEEESCEEESCSSEEEECTTCS-------SCCEEESCEEE
T ss_pred eEEEECCccccccccccccCCCCEEEecc------CCcCCEEEEeeEEECCcCcCEeecCCC-------CCEEEECeEEE
Confidence 998753 235666543 2345788999998875 3566553221 23788888887
Q ss_pred cCcccEEEe
Q 043588 304 NVQFPIVID 312 (397)
Q Consensus 304 ~~~~~i~i~ 312 (397)
+....+.+.
T Consensus 291 ~N~~~~~~~ 299 (400)
T 1ru4_A 291 KNGINYGFG 299 (400)
T ss_dssp SSSEEEEEC
T ss_pred CCccceEEe
Confidence 766666664
No 36
>1h80_A IOTA-carrageenase; hydrolase, IOTA-carrageenan double helix degradation; 1.6A {Alteromonas SP} SCOP: b.80.1.8 PDB: 1ktw_A* 3lmw_A
Probab=99.41 E-value=7.3e-12 Score=123.48 Aligned_cols=158 Identities=16% Similarity=0.147 Sum_probs=120.0
Q ss_pred EccCCeEEEee----EEecC-----cceEEEEeceecEEEEeEEEECCCCCCCCCceeeecceeEEEEecEEecCCceEE
Q 043588 157 TNSNNIRINGL----LSLNS-----QMFHIVINGCKDVHIEGVTVIAPGNSPNTDGIHVQLSTNVKITNCTIKTGDDCIP 227 (397)
Q Consensus 157 ~~~~nv~i~~v----~i~~~-----~~~~i~~~~~~nv~i~n~~i~~~~~~~~~DGi~~~~s~nv~I~n~~i~~~dD~i~ 227 (397)
.+.+|++|.|- .+... ....+.+..|+|++|+++++.+.+ .+..+.+|.+. ..|++.
T Consensus 106 ~~~~nItI~G~Gg~~~iDG~G~~~~rp~~i~~~~~~Nv~I~gIti~n~w--------~ih~s~~V~i~------NtDGi~ 171 (464)
T 1h80_A 106 NIVRNFSFQGLGNGFLVDFKDSRDKNLAVFKLGDVRNYKISNFTIDDNK--------TIFASILVDVT------ERNGRL 171 (464)
T ss_dssp SCEEEEEEEECTTCEEEECTTCSCCBEEEEEECSEEEEEEEEEEEECCS--------CBSCSEEECEE------EETTEE
T ss_pred cCccceEEECcCcceEEeCCCCCCCCceEEEEEeeccEEEeeeEEeccc--------eEeeceeeeee------cCCCce
Confidence 46778888876 33322 123578899999999999999842 13344555443 357777
Q ss_pred eCCCCeeEEEEeeEEecCc-eeEEeeecccCCcCCEEEEEEEeeEEeCCcceEEEEee-----cCCCCceEEceEEEEEE
Q 043588 228 IGPGTKNLWIERVTCGPGH-GISIGSLAKDLIEEGVQNVTVFKTVFTGTTNGFRIKSW-----ARPSNGFVQGVSFIDAI 301 (397)
Q Consensus 228 i~~~s~nv~i~n~~~~~~~-gi~igs~~~~~~~~~v~nI~i~n~~~~~~~~gi~i~~~-----~~~~~g~i~ni~~~ni~ 301 (397)
+ .++||+|+||++..++ ++ |+. ....++||+|+||+|.+ .+|++|+++ .. ..+.++||+|+|++
T Consensus 172 i--~s~nV~I~n~~I~~gddgi--Gs~----~~~~~~NV~V~n~~~~g-g~GIrIktg~d~IG~~-~~g~v~NI~~~Ni~ 241 (464)
T 1h80_A 172 H--WSRNGIIERIKQNNALFGY--GLI----QTYGADNILFRNLHSEG-GIALRMETDNLLMKNY-KQGGIRNIFADNIR 241 (464)
T ss_dssp E--EEEEEEEEEEEEESCCTTC--EEE----EESEEEEEEEEEEEEES-SEEEEEECCCHHHHHH-TCCEEEEEEEEEEE
T ss_pred e--eccCEEEeceEEecCCCeE--Eec----ccCCEeEEEEEeeEEEC-CCEEEEEeCCceeccC-CCCcEEEEEEEeEE
Confidence 7 4899999999999875 45 322 34679999999999999 799999987 44 56899999999999
Q ss_pred EecCcccEEEeeecCCCCCCCCCCccceEEEeEEEEeEEEeeCCCceEEEe
Q 043588 302 MRNVQFPIVIDQNYCPHNLNCPGQVSGVKINDITYQDIRGTSATPIAIKFD 352 (397)
Q Consensus 302 ~~~~~~~i~i~~~~~~~~~~~~~~~~~~~i~nI~f~ni~~~~~~~~~~~i~ 352 (397)
|+++..+|.|+.. ...++||+|+||+++... .++.+.
T Consensus 242 ~~nv~~~I~I~p~-------------~~~isnItfeNI~~t~~~-~aI~i~ 278 (464)
T 1h80_A 242 CSKGLAAVMFGPH-------------FMKNGDVQVTNVSSVSCG-SAVRSD 278 (464)
T ss_dssp EESSSEEEEEECT-------------TCBCCCEEEEEEEEESSS-CSEEEC
T ss_pred EECCceeEEEeCC-------------CceEeEEEEEEEEEEccc-eeEEEe
Confidence 9999999999721 126899999999999854 567665
No 37
>2x6w_A Tail spike protein; viral protein, beta-helix, hydrolase; HET: RAM GLC GLA NAG NDG; 1.35A {Enterobacteria phage HK620} PDB: 2vji_A 2vjj_A* 2x85_A* 2x6x_A* 2x6y_A*
Probab=99.38 E-value=9.5e-12 Score=124.08 Aligned_cols=226 Identities=12% Similarity=0.013 Sum_probs=149.9
Q ss_pred ceEEEEccEEEeeccccccCCC-----cceEEEecccceEEEceeeeCCCCcccccccCCCCCCCCceeEEE---EccCC
Q 043588 90 DITFRIDGTLVAPADYRVLGQA-----DNWLSFEGVSGVSIIGGALDAKGSSLWACKASGANCPDGATTLRF---TNSNN 161 (397)
Q Consensus 90 ~~~l~~~G~l~~~~~~~~~~~~-----~~~i~~~~~~ni~I~GG~idg~g~~~w~~~~~~~~~~~~~~~i~~---~~~~n 161 (397)
|++|.+.|+|..... ..|+.. ++++.+.+++ |+|-++.. ..+.| .+++ ..|+|
T Consensus 151 NItItG~GtIDGqG~-~wW~~~~~~~~RP~l~f~~c~---I~GITi~N-SDP~w--------------~I~iG~~~~c~N 211 (600)
T 2x6w_A 151 NCHIYGHGVVDFGGY-EFGASSQLRNGVAFGRSYNCS---VTGITFQN-GDVTW--------------AITLGWNGYGSN 211 (600)
T ss_dssp EEEEESSCEEECTTC-CCSSTTCCEEEEECCSEEEEE---EESCEEES-CCCSC--------------SEEECBTTBEEE
T ss_pred eEEEecceeeeCCcc-ccccccccCCCCCEEEEeeeE---EeCeEEEC-CCCcc--------------EEEeCCCCCccc
Confidence 888988888876322 223211 2223444444 77743332 21233 3888 89999
Q ss_pred eEEEeeE----EecCc-ceEEEEeceecEEEEeEEEECCCCCCCCCceee-ecce--eEEEEecEEecCCceEEeCC---
Q 043588 162 IRINGLL----SLNSQ-MFHIVINGCKDVHIEGVTVIAPGNSPNTDGIHV-QLST--NVKITNCTIKTGDDCIPIGP--- 230 (397)
Q Consensus 162 v~i~~v~----i~~~~-~~~i~~~~~~nv~i~n~~i~~~~~~~~~DGi~~-~~s~--nv~I~n~~i~~~dD~i~i~~--- 230 (397)
|+|++++ +.+++ .+|| |+|+||+|.+. .|+|.+ .+.+ ++.++ .+..++.+|++++
T Consensus 212 VtI~nvtfi~aI~sspNTDGI-------V~I~nc~I~tG-----DDCIAI~KSGs~~ni~~e--~~~~GHgGISIGSe~~ 277 (600)
T 2x6w_A 212 CYVRKCRFINLVNSSVNADHS-------TVYVNCPYSGV-----ESCYFSMSSSFARNIACS--VQLHQHDTFYRGSTVN 277 (600)
T ss_dssp EEEESCEEECCCCCSSCCCEE-------EEEECSSSEEE-----ESCEEECCCTTHHHHEEE--EEECSSSEEEESCEEE
T ss_pred EEEeCeEEcceEecCCCCCEE-------EEEEeeEEecC-----CcEEEEecCCCcCCeEEE--EEcCCCCcEEeccccc
Confidence 9999999 77644 3566 99999999974 478999 6533 46666 5666788999998
Q ss_pred -CCeeEEEEeeEEecCceeEEeeecccCCcCCEEEEEEEeeEEeCCcceEEEEeec-CCCCceEEceEEEEEEEecCcc-
Q 043588 231 -GTKNLWIERVTCGPGHGISIGSLAKDLIEEGVQNVTVFKTVFTGTTNGFRIKSWA-RPSNGFVQGVSFIDAIMRNVQF- 307 (397)
Q Consensus 231 -~s~nv~i~n~~~~~~~gi~igs~~~~~~~~~v~nI~i~n~~~~~~~~gi~i~~~~-~~~~g~i~ni~~~ni~~~~~~~- 307 (397)
+.+||+|+| + |++... ..+.++||+|+|++|.+...++.+...+ +...+.|+||+|+|++.+....
T Consensus 278 ggV~NV~V~N-r--------IKt~~G--~GG~V~NItfeNI~m~nV~~~I~i~q~~~~~s~~~IsnItfkNItgTsas~a 346 (600)
T 2x6w_A 278 GYCRGAYVVM-H--------AAEAAG--AGSYAYNMQVENNIAVIYGQFVILGSDVTATVSGHLNDVIVSGNIVSIGERA 346 (600)
T ss_dssp EESEEEEEEE-C--------GGGCTT--TCSEEEEEEEESCEEEESSEEEEEEECBCSSCBCEEEEEEEESCEEEECSCC
T ss_pred CcEEEEEEEE-E--------EEeecC--CCceEEEEEEEEEEEEccceEEEeCCCCCCCCCceEEEEEEEeEEEEecccc
Confidence 357888888 3 333221 2367999999999999988888886642 2345789999999999986542
Q ss_pred ------cEEEeeecCCCCCCCCCCccceEEEeEEEEeEEEeeCC---Cc-eEEEeecCCCceecEEEEeEE
Q 043588 308 ------PIVIDQNYCPHNLNCPGQVSGVKINDITYQDIRGTSAT---PI-AIKFDCSTKYPCQGIKLQNIN 368 (397)
Q Consensus 308 ------~i~i~~~~~~~~~~~~~~~~~~~i~nI~f~ni~~~~~~---~~-~~~i~~~~~~~i~ni~~~ni~ 368 (397)
+..|.....+ | ......+|++|+|+|+++...+ .. ++.+ ...+++|+|.+-.
T Consensus 347 av~~~~g~~i~g~p~~----~-~~~~~~~Ie~V~~~~~~~~~~~~~~~~~~~~~----~~~~~g~~~~~~~ 408 (600)
T 2x6w_A 347 AFSAPFGAFIDIGPDN----S-GASNVQDIQRVLVTGNSFYAPANITDSAAITL----RANLNGCTFIANN 408 (600)
T ss_dssp TTSSSCEEEEEECCCT----T-CCSSSCCEEEEEEESCEEECCTTCSSEEEEEE----CSCBSCEEEESCE
T ss_pred ccccccceEEEecCcc----c-ccccccceeEEEEeceEEEcCCccCCCcceee----eccccceEEecCc
Confidence 2445443211 1 1234568999999999986532 21 2222 3567888888766
No 38
>2pyg_A Poly(beta-D-mannuronate) C5 epimerase 4; beta-helix, isomerase; 2.10A {Azotobacter vinelandii} PDB: 2pyh_A*
Probab=99.38 E-value=3.5e-11 Score=116.86 Aligned_cols=211 Identities=13% Similarity=0.095 Sum_probs=149.7
Q ss_pred cccceEEEceeeeCCCCcccccccCCCCCCCCceeEEEEccC-CeEEEeeEEecCcceEEEEeceecEEEEeEEEECCCC
Q 043588 119 GVSGVSIIGGALDAKGSSLWACKASGANCPDGATTLRFTNSN-NIRINGLLSLNSQMFHIVINGCKDVHIEGVTVIAPGN 197 (397)
Q Consensus 119 ~~~ni~I~GG~idg~g~~~w~~~~~~~~~~~~~~~i~~~~~~-nv~i~~v~i~~~~~~~i~~~~~~nv~i~n~~i~~~~~ 197 (397)
++++++|+|-++.... ...|++..|. +++++++.+.+...+++.+..|++.+|+++++..
T Consensus 132 ~~~nv~I~~~~i~n~~----------------~~gi~~~~~~~~~~i~n~~~~~~~~dGI~~~~s~~~~i~~N~~~~--- 192 (377)
T 2pyg_A 132 ADRDVTIERVEVREMS----------------GYGFDPHEQTINLTIRDSVAHDNGLDGFVADYLVDSVFENNVAYA--- 192 (377)
T ss_dssp CEEEEEEEEEEEECCS----------------SCSEEECSSEEEEEEESCEEESCSSCSEEEESEEEEEEESCEEES---
T ss_pred cccceEEEeEEEEecc----------------cceEEeecccCCeEEEeEEeecCCCCceeEeccCCcEEECcEEEc---
Confidence 5789999994442111 1146776654 7889999998888899999999999999998776
Q ss_pred CCCCCceeeec-ceeEEEEecEEecCCceEEeC-------CCCeeEEEEeeEEec--CceeEEeeecccCCcCCEEEEEE
Q 043588 198 SPNTDGIHVQL-STNVKITNCTIKTGDDCIPIG-------PGTKNLWIERVTCGP--GHGISIGSLAKDLIEEGVQNVTV 267 (397)
Q Consensus 198 ~~~~DGi~~~~-s~nv~I~n~~i~~~dD~i~i~-------~~s~nv~i~n~~~~~--~~gi~igs~~~~~~~~~v~nI~i 267 (397)
.+.|||++.. |++++|+|+.+...++++.+. ..+++++|+++.++. .+|+.+. .+++++|
T Consensus 193 -~~~~GI~~~~~s~~v~I~nN~i~~~~~g~~~~~~g~~~~~~s~nv~i~~N~~~~n~~~Gi~~~---------~~~~v~i 262 (377)
T 2pyg_A 193 -NDRHGFNVVTSTHDFVMTNNVAYGNGSSGLVVQRGLEDLALPSNILIDGGAYYDNAREGVLLK---------MTSDITL 262 (377)
T ss_dssp -CSSCSEEEETTCEEEEEESCEEESCSSCSEEEECCSSCCCCCEEEEEESCEEESCSSCSEEEE---------EEEEEEE
T ss_pred -cccCcEEEEeccCCeEEECCEEECccCceEEEeccccCCCCCccEEEECCEEEcCccCceEec---------cccCeEE
Confidence 4679999887 999999999999988888872 458999999999986 4677663 3689999
Q ss_pred EeeEEeCC-cceEEEEeecCCCCceEEceEEEEEEEecCcc----cEEEeeecCCCCCCCCCCccceEEEeEEEEeEEEe
Q 043588 268 FKTVFTGT-TNGFRIKSWARPSNGFVQGVSFIDAIMRNVQF----PIVIDQNYCPHNLNCPGQVSGVKINDITYQDIRGT 342 (397)
Q Consensus 268 ~n~~~~~~-~~gi~i~~~~~~~~g~i~ni~~~ni~~~~~~~----~i~i~~~~~~~~~~~~~~~~~~~i~nI~f~ni~~~ 342 (397)
+|+++.++ ..|++++. .++++|+|+++.+... +..+.+.|+.....+. ....-+++++++.++.
T Consensus 263 ~~N~i~~~~~~GI~i~g--------~~~~~i~~N~i~~n~~~~~~~~v~~~~~~~~~~~~~---~~~~~~~~~i~~N~i~ 331 (377)
T 2pyg_A 263 QNADIHGNGSSGVRVYG--------AQDVQILDNQIHDNAQAAAVPEVLLQSFDDTAGASG---TYYTTLNTRIEGNTIS 331 (377)
T ss_dssp ESCEEESCSSCSEEEEE--------EEEEEEESCEEESCCSSSSCCSEEEECEEETTSSSC---EEECCBCCEEESCEEE
T ss_pred ECCEEECCCCceEEEec--------CCCcEEECcEEECCcccccccceEEEEecCCCccce---eeeeccCeEEECCEEE
Confidence 99999998 78999973 6789999999987653 2222223332110000 0001245555555554
Q ss_pred e--CCCceEEEeecCCCceecEEEEeEEEEeC
Q 043588 343 S--ATPIAIKFDCSTKYPCQGIKLQNINLRHL 372 (397)
Q Consensus 343 ~--~~~~~~~i~~~~~~~i~ni~~~ni~i~~~ 372 (397)
. .....+.+.+ ..+++++++|..+...
T Consensus 332 g~~~~~~~i~~~~---~~~~~~~i~~n~i~~~ 360 (377)
T 2pyg_A 332 GSANSTYGIQERN---DGTDYSSLIDNDIAGV 360 (377)
T ss_dssp CCSSCCEEEEECS---SSCBCCEEESCEEESS
T ss_pred CcCCCccceEEcc---CCCccEEEECcEEeCC
Confidence 4 2233555533 4567889998888754
No 39
>1dbg_A Chondroitinase B; beta helix, polysaccharide lyase, dematan sulfate; HET: MAN RAM GCU MXY G4D BGC; 1.70A {Pedobacter heparinus} SCOP: b.80.1.4 PDB: 1dbo_A* 1ofl_A* 1ofm_A*
Probab=99.37 E-value=4.1e-11 Score=119.21 Aligned_cols=274 Identities=9% Similarity=0.024 Sum_probs=156.2
Q ss_pred hHHHHHHHHHHhhccCCCcEEEEcCceEEeeceeeecc--CCCcceEEEEc--c-EEEeeccccccCCCcceEEEecccc
Q 043588 48 STQAFAKAWDAACTSTESATINVPKGRYLLGSVAFKGD--CKSSDITFRID--G-TLVAPADYRVLGQADNWLSFEGVSG 122 (397)
Q Consensus 48 dt~aiq~Ai~~a~~~~~g~~v~ip~G~Y~~~~~~l~~~--~~s~~~~l~~~--G-~l~~~~~~~~~~~~~~~i~~~~~~n 122 (397)
+.+.||+||++| .+|++|+|++|+|.-..+.+.+. -.. .++|..+ + ++.... ..+.+. .++
T Consensus 30 ~~~~Lq~Ai~~A---~pGDtI~L~~GtY~~~~i~i~~sGt~~~-pItl~~~~~~~~vi~G~---------~~l~i~-g~~ 95 (506)
T 1dbg_A 30 SNETLYQVVKEV---KPGGLVQIADGTYKDVQLIVSNSGKSGL-PITIKALNPGKVFFTGD---------AKVELR-GEH 95 (506)
T ss_dssp SHHHHHHHHHHC---CTTCEEEECSEEEETCEEEECCCCBTTB-CEEEEESSTTSEEEEES---------CEEEEC-SSS
T ss_pred CHHHHHHHHHhC---CCCCEEEECCCEEecceEEEecCCcCCC-CEEEECCCCCccEEeCC---------ceEEEE-cCC
Confidence 466799999876 67899999999998545665210 012 6888875 2 222111 124444 478
Q ss_pred eEEEceeeeCCCCcccccccCCCCCCCCceeEEEEccCCeEEEeeEEecCcce-EEEE--------eceecEEEEeEEEE
Q 043588 123 VSIIGGALDAKGSSLWACKASGANCPDGATTLRFTNSNNIRINGLLSLNSQMF-HIVI--------NGCKDVHIEGVTVI 193 (397)
Q Consensus 123 i~I~GG~idg~g~~~w~~~~~~~~~~~~~~~i~~~~~~nv~i~~v~i~~~~~~-~i~~--------~~~~nv~i~n~~i~ 193 (397)
++|+|-++.+.+........ ..+..+.+. .++++|++++|.+...- .+.+ ...++.+|++++|.
T Consensus 96 v~i~GL~i~~~~~~~~~~~~------~~~~~iav~-G~~~~I~nn~I~~~~~gd~i~i~~~~~~~~l~g~~n~I~~N~I~ 168 (506)
T 1dbg_A 96 LILEGIWFKDGNRAIQAWKS------HGPGLVAIY-GSYNRITACVFDCFDEANSAYITTSLTEDGKVPQHCRIDHCSFT 168 (506)
T ss_dssp EEEESCEEEEECCCTTTCCT------TSCCSEEEC-SSSCEEESCEEESCCSSCSCSEEECCCTTCCCCCSCEEESCEEE
T ss_pred EEEECeEEECCCcceeeeec------ccccceEEe-cCCeEEEeeEEEcCCCCceeeEeecccceeeeccccEEECcEEE
Confidence 88888555443321100000 012234444 58999999999876331 0222 24667789999999
Q ss_pred CCCCCCCCC----ceeeec-------ceeEEEEecEEecC------CceEEeCC---CCeeEEEEeeEEecCc-eeEEee
Q 043588 194 APGNSPNTD----GIHVQL-------STNVKITNCTIKTG------DDCIPIGP---GTKNLWIERVTCGPGH-GISIGS 252 (397)
Q Consensus 194 ~~~~~~~~D----Gi~~~~-------s~nv~I~n~~i~~~------dD~i~i~~---~s~nv~i~n~~~~~~~-gi~igs 252 (397)
+..+..... |++++. +.+.+|+++.|... -+.+.++. .+++.+|+++.|...+ |.++-+
T Consensus 169 Gk~~~G~~i~gnngI~l~~~~~~~~~~~~~~I~nN~f~~~~~~~N~~e~iR~G~h~m~s~~~~VenN~f~~~~gg~aim~ 248 (506)
T 1dbg_A 169 DKITFDQVINLNNTARAIKDGSVGGPGMYHRVDHCFFSNPQKPGNAGGGIRIGYYRNDIGRCLVDSNLFMRQDSEAEIIT 248 (506)
T ss_dssp CCCSSSCSEEECSSCCCSCCCSCCCCCCCCEEESCEEEECCCSSSCCCSEEECSSTTCBCCCEEESCEEEEECSSSEEEE
T ss_pred CCcCcceEEecCceeEeccCcccccccCCeEEeCcEEcccccCCCccccEEEEEEecccCCcEEECCEEEeccCcEEEEE
Confidence 854333333 777775 36899999999853 34555552 2579999999998654 333311
Q ss_pred ecccCCcCCEEEEEEEeeEEeCCcceEEEEeecCCCCceEEceEEEEEEEecCc-----ccEEEeeecCCCCCCCCCCcc
Q 043588 253 LAKDLIEEGVQNVTVFKTVFTGTTNGFRIKSWARPSNGFVQGVSFIDAIMRNVQ-----FPIVIDQNYCPHNLNCPGQVS 327 (397)
Q Consensus 253 ~~~~~~~~~v~nI~i~n~~~~~~~~gi~i~~~~~~~~g~i~ni~~~ni~~~~~~-----~~i~i~~~~~~~~~~~~~~~~ 327 (397)
. .-.+.+|+++++.+...++.+... . +.++++..+.+.. .+++|. . .
T Consensus 249 s-------kS~~n~i~~N~~~~~~ggi~l~~~---~-----~s~I~~N~f~gN~~~~~~~Gi~i~---~----------~ 300 (506)
T 1dbg_A 249 S-------KSQENVYYGNTYLNCQGTMNFRHG---D-----HQVAINNFYIGNDQRFGYGGMFVW---G----------S 300 (506)
T ss_dssp E-------ESBSCEEESCEEESCSSEEEEEEC---S-----SCEEESCEEEECSSSSCBCCEEEC---S----------B
T ss_pred E-------ecCCEEEECCEEEcccCcEEEeec---C-----ccEEECCEEECCcCccCceEEEEE---C----------C
Confidence 1 001357899999888777766532 1 1334444444332 345552 1 1
Q ss_pred ceEEEeEEEEeEEEee-CCCceEEEe-ecC---CCceecEEEEeEEEE
Q 043588 328 GVKINDITYQDIRGTS-ATPIAIKFD-CST---KYPCQGIKLQNINLR 370 (397)
Q Consensus 328 ~~~i~nI~f~ni~~~~-~~~~~~~i~-~~~---~~~i~ni~~~ni~i~ 370 (397)
...|+|=.|++..+.. ....++.+. |.+ -..++++++.+=++.
T Consensus 301 ~~~I~nN~f~~~~g~~~~~~~GI~i~~G~~~~~~~~~~~~~I~~Ntfi 348 (506)
T 1dbg_A 301 RHVIACNYFELSETIKSRGNAALYLNPGAMASEHALAFDMLIANNAFI 348 (506)
T ss_dssp SCEEESCEEEESSBCGGGTSEEEEECCBCTTSTTCCCBSEEEESCEEE
T ss_pred CCEEECCEEECCcCccccccccEEEecCCCccccccccCcEEECCEEE
Confidence 1267777777765410 111245554 332 123455666555554
No 40
>3eqn_A Glucan 1,3-beta-glucosidase; tandem beta-helix domains, glycosidase, hydrolase; HET: NAG BMA; 1.70A {Phanerochaete chrysosporium} PDB: 3eqo_A*
Probab=99.31 E-value=3.2e-11 Score=122.85 Aligned_cols=94 Identities=18% Similarity=0.247 Sum_probs=70.5
Q ss_pred ceeEEeeccCccCCCCcchHHHHHHHHHHhhccCCCcEEEEcCceEEee-ceeeeccCCCcceEEEEcc--EEEeecc-c
Q 043588 30 TTTYNVLSFGAKGNGVTDSTQAFAKAWDAACTSTESATINVPKGRYLLG-SVAFKGDCKSSDITFRIDG--TLVAPAD-Y 105 (397)
Q Consensus 30 ~~~~~v~d~GA~~dg~tddt~aiq~Ai~~a~~~~~g~~v~ip~G~Y~~~-~~~l~~~~~s~~~~l~~~G--~l~~~~~-~ 105 (397)
...++|+||||+|||.+|||+|||+||+++ .++++||||+|+|++. +|.++ + +++|.+++ +|..... .
T Consensus 398 ~~~vnVkd~GA~GDG~tDDT~Ai~~al~aa---~~g~~v~~P~G~Y~vt~Ti~ip----~-~~~ivG~~~~~I~~~G~~F 469 (758)
T 3eqn_A 398 SDFVSVRSQGAKGDGHTDDTQAIKNVFAKY---AGCKIIFFDAGTYIVTDTIQIP----A-GTQIVGEVWSVIMGTGSKF 469 (758)
T ss_dssp GGEEETTTTTCCCEEEEECHHHHHHHHHHH---TTTSEEECCSEEEEESSCEEEC----T-TCEEECCSSEEEEECSGGG
T ss_pred cceEEeeeccccCCCCchhHHHHHHHHHHh---cCCCEEEECCCEeEECCeEEcC----C-CCEEEecccceEecCCccc
Confidence 348999999999999999999999999865 5689999999999876 68887 5 99999997 5554321 1
Q ss_pred cccCCCcceEEE---ecccceEEEceeee
Q 043588 106 RVLGQADNWLSF---EGVSGVSIIGGALD 131 (397)
Q Consensus 106 ~~~~~~~~~i~~---~~~~ni~I~GG~id 131 (397)
.+-..+.+++.+ .+...+.|.|-+++
T Consensus 470 ~d~~~P~pvv~VG~~gd~G~veisdl~~~ 498 (758)
T 3eqn_A 470 TDYNNPQPVIQVGAPGSSGVVEITDMIFT 498 (758)
T ss_dssp CCTTSCEEEEEESCTTCBSCEEEESCEEE
T ss_pred cCCCCCeeeEEeCCCCCCCeEEEEeEEEE
Confidence 222223456666 34557888884444
No 41
>3uw0_A Pectinesterase; right-handed beta-helix, carbohydrate esterase, hydrolase; 3.50A {Yersinia enterocolitica subsp}
Probab=98.91 E-value=5.2e-08 Score=92.90 Aligned_cols=182 Identities=15% Similarity=0.219 Sum_probs=103.5
Q ss_pred chHHHHHHHHHHhhccCCCcEEEEcCceEEeeceeeeccCCCcceEEEEcc---EEEeeccccccCCCcceEEEecccce
Q 043588 47 DSTQAFAKAWDAACTSTESATINVPKGRYLLGSVAFKGDCKSSDITFRIDG---TLVAPADYRVLGQADNWLSFEGVSGV 123 (397)
Q Consensus 47 ddt~aiq~Ai~~a~~~~~g~~v~ip~G~Y~~~~~~l~~~~~s~~~~l~~~G---~l~~~~~~~~~~~~~~~i~~~~~~ni 123 (397)
-+-..||+||+++.......+|+|+||+|.- .+.+. |. +++|.++| ++....+..
T Consensus 42 g~f~TIq~Ai~aa~~~~~~~~I~I~~G~Y~E-~v~I~---k~-~itl~G~g~~~TiIt~~~~~----------------- 99 (364)
T 3uw0_A 42 DEFSSINAALKSAPKDDTPFIIFLKNGVYTE-RLEVA---RS-HVTLKGENRDGTVIGANTAA----------------- 99 (364)
T ss_dssp --CCCHHHHHHHSCSSSSCEEEEECSEEECC-CEEEC---ST-TEEEEESCTTTEEEEECCCT-----------------
T ss_pred CCcccHHHHHhhcccCCCcEEEEEeCCEEEE-EEEEc---CC-eEEEEecCCCCeEEEccccc-----------------
Confidence 3446699999876211112399999999975 35554 24 78888875 332211110
Q ss_pred EEEceeeeCCCCcccccccCCCCCCCCceeEEEEccCCeEEEeeEEecCcc------------------e--EEEEe-ce
Q 043588 124 SIIGGALDAKGSSLWACKASGANCPDGATTLRFTNSNNIRINGLLSLNSQM------------------F--HIVIN-GC 182 (397)
Q Consensus 124 ~I~GG~idg~g~~~w~~~~~~~~~~~~~~~i~~~~~~nv~i~~v~i~~~~~------------------~--~i~~~-~~ 182 (397)
+....++..+ . ..+...+. ..+++++++|++|.|... . ++.+. .+
T Consensus 100 ----~~~~~~g~~~-g--------t~~saTv~-V~a~~f~a~nitf~Nt~~~~~~~~~~~~~p~~~~~~QAvAl~v~~~~ 165 (364)
T 3uw0_A 100 ----GMLNPQGEKW-G--------TSGSSTVL-VNAPNFTAENLTIRNDFDFPANKKKADTDPTKLKDTQAVALLLAENS 165 (364)
T ss_dssp ----TSBCTTCSBC-C--------TTTCCSEE-ECSTTCEEEEEEEEECCCHHHHHHSCTTCTTCCSCCCCCSEEECTTC
T ss_pred ----cccccccccc-c--------ccCeeEEE-EECCCEEEEeeeeEcCCcccccccccccccccccCCccEEEEEecCC
Confidence 0010011100 0 00111233 357899999999988741 1 34444 57
Q ss_pred ecEEEEeEEEECCCCCCCCCceeeecceeEEEEecEEecCCceEEeCCCCeeEEEEeeEEecC--------ceeEEeeec
Q 043588 183 KDVHIEGVTVIAPGNSPNTDGIHVQLSTNVKITNCTIKTGDDCIPIGPGTKNLWIERVTCGPG--------HGISIGSLA 254 (397)
Q Consensus 183 ~nv~i~n~~i~~~~~~~~~DGi~~~~s~nv~I~n~~i~~~dD~i~i~~~s~nv~i~n~~~~~~--------~gi~igs~~ 254 (397)
+...+++|+|.. ..|.+......+..+++|.|...-|-|. + .....++||++..- .| .|-..+
T Consensus 166 D~~~f~~C~f~G-----~QDTLy~~~~gr~yf~~c~I~GtvDFIF-G--~a~a~f~~c~i~~~~~~~~~~~~g-~ITA~~ 236 (364)
T 3uw0_A 166 DKARFKAVKLEG-----YQDTLYSKTGSRSYFSDCEISGHVDFIF-G--SGITVFDNCNIVARDRSDIEPPYG-YITAPS 236 (364)
T ss_dssp EEEEEEEEEEEC-----SBSCEEECTTCEEEEESCEEEESEEEEE-E--SSEEEEESCEEEECCCSSCSSCCE-EEEEEC
T ss_pred CeEEEEeeEEEe-----cccceEeCCCCCEEEEcCEEEcCCCEEC-C--cceEEEEeeEEEEeccCcccCCcc-EEEeCC
Confidence 888888888886 4467777645678888888887656553 2 34688888887531 12 121111
Q ss_pred ccCCcCCEEEEEEEeeEEeCC
Q 043588 255 KDLIEEGVQNVTVFKTVFTGT 275 (397)
Q Consensus 255 ~~~~~~~v~nI~i~n~~~~~~ 275 (397)
. +...-..+.|.||++...
T Consensus 237 ~--~~~~~~G~vf~~c~i~~~ 255 (364)
T 3uw0_A 237 T--LTTSPYGLIFINSRLTKE 255 (364)
T ss_dssp C--CTTCSCCEEEESCEEEEC
T ss_pred c--CCCCCcEEEEEeeEEecC
Confidence 1 112234578888888754
No 42
>1pcl_A Pectate lyase E; lyase (acting on polysaccharides); 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1
Probab=98.76 E-value=1.1e-06 Score=83.75 Aligned_cols=76 Identities=26% Similarity=0.292 Sum_probs=53.6
Q ss_pred CCCceeeecceeEEEEecEEecC------------------CceEEeCCCCeeEEEEeeEEecCc-eeEEeeecccC-Cc
Q 043588 200 NTDGIHVQLSTNVKITNCTIKTG------------------DDCIPIGPGTKNLWIERVTCGPGH-GISIGSLAKDL-IE 259 (397)
Q Consensus 200 ~~DGi~~~~s~nv~I~n~~i~~~------------------dD~i~i~~~s~nv~i~n~~~~~~~-gi~igs~~~~~-~~ 259 (397)
..|+|.+.++++|+|++|.|..+ |..+.++.++.+|+|+||+|...+ ++-+|+..... ..
T Consensus 132 ~~DaI~i~~s~nVWIDH~s~s~~~~~d~~~~~~~G~~~~~~Dgl~Di~~~s~~VTiS~n~f~~h~k~~LiG~sd~~~~~d 211 (355)
T 1pcl_A 132 EWDAAVIDNSTNVWVDHVTISDGSFTDDKYTTKDGEKYVQHDGALDIKKGSDYVTISYSRFELHDKTILIGHSDSNGSQD 211 (355)
T ss_pred cCceEEecCCCcEEEEeeEEeccccCccccccccCccccccccceeeecCCCcEEEEeeEEcCCCceEEeCCCCCCcccc
Confidence 46888888889999999999853 555667767899999999998653 45566531110 01
Q ss_pred CCEEEEEEEeeEEeCC
Q 043588 260 EGVQNVTVFKTVFTGT 275 (397)
Q Consensus 260 ~~v~nI~i~n~~~~~~ 275 (397)
....+|++.++.+.+.
T Consensus 212 ~g~~~vT~hhN~f~~~ 227 (355)
T 1pcl_A 212 SGKLRVTFHNNVFDRV 227 (355)
T ss_pred cCcceEEEECcEEeCC
Confidence 1234799999999775
No 43
>1pxz_A Major pollen allergen JUN A 1; parallel beta-helix, cedar pollen; 1.70A {Juniperus ashei} SCOP: b.80.1.1
Probab=98.71 E-value=4.1e-07 Score=86.44 Aligned_cols=114 Identities=16% Similarity=0.138 Sum_probs=69.7
Q ss_pred EEEEccCCeEEEeeEEecCcc-eEEEE-eceecEEEEeEEEECCCCCCCCCceeeecceeEEEEecEEecCCceE-EeCC
Q 043588 154 LRFTNSNNIRINGLLSLNSQM-FHIVI-NGCKDVHIEGVTVIAPGNSPNTDGIHVQLSTNVKITNCTIKTGDDCI-PIGP 230 (397)
Q Consensus 154 i~~~~~~nv~i~~v~i~~~~~-~~i~~-~~~~nv~i~n~~i~~~~~~~~~DGi~~~~s~nv~I~n~~i~~~dD~i-~i~~ 230 (397)
|.+..++||.|++++|.+... +.-.+ ..... +.-.+ .....|||.+.++++|+|++|+|..+.|++ .+..
T Consensus 108 i~i~~a~NVIIrnl~i~~~~~~~~~~I~~~~~~----~~g~~---~~~~~DaI~i~~s~nVwIDHcs~s~~~Dg~id~~~ 180 (346)
T 1pxz_A 108 LFMRKVSHVILHSLHIHGCNTSVLGDVLVSESI----GVEPV---HAQDGDAITMRNVTNAWIDHNSLSDCSDGLIDVTL 180 (346)
T ss_dssp EEEESCEEEEEESCEEECCCCCCSEEEEEETTT----EEEEE---CCCCCCSEEEESCEEEEEESCEEECCSSEEEEEES
T ss_pred EEEEccCCEEEEeeEEEeeccCCCceEEeccCc----ccccc---cCCCCCEEEEecCceEEEEeeEEecCCCCcEeecc
Confidence 566678888888888876521 10000 00000 00000 124678999999999999999998876665 5655
Q ss_pred CCeeEEEEeeEEecCc-eeEEeeecccCCcCCEEEEEEEeeEE-eCC
Q 043588 231 GTKNLWIERVTCGPGH-GISIGSLAKDLIEEGVQNVTVFKTVF-TGT 275 (397)
Q Consensus 231 ~s~nv~i~n~~~~~~~-gi~igs~~~~~~~~~v~nI~i~n~~~-~~~ 275 (397)
++.+|+|+||.|...+ ++-+|+..... .....+|+++++.+ .+.
T Consensus 181 ~s~~vTISnn~f~~H~k~~l~G~sd~~~-~d~~~~vT~~~N~f~~~~ 226 (346)
T 1pxz_A 181 GSTGITISNNHFFNHHKVMLLGHDDTYD-DDKSMKVTVAFNQFGPNA 226 (346)
T ss_dssp SCEEEEEESCEEESEEEEEEESCCSSCG-GGGGCEEEEESCEECSSE
T ss_pred CcceEEEEeeEEecCCceeEECCCCccc-cCCceEEEEEeeEEeCCc
Confidence 6899999999988643 46666542111 11234788888888 553
No 44
>2qy1_A Pectate lyase II; GAG lyase; 1.90A {Xanthomonas campestris PV} PDB: 2qxz_A 2qx3_A
Probab=98.71 E-value=8e-07 Score=83.97 Aligned_cols=92 Identities=14% Similarity=0.147 Sum_probs=44.1
Q ss_pred eecEEEEeEEEECCCCCCCCCceeee-----cceeEEEEecEEecC------------CceEEeCCCCeeEEEEeeEEec
Q 043588 182 CKDVHIEGVTVIAPGNSPNTDGIHVQ-----LSTNVKITNCTIKTG------------DDCIPIGPGTKNLWIERVTCGP 244 (397)
Q Consensus 182 ~~nv~i~n~~i~~~~~~~~~DGi~~~-----~s~nv~I~n~~i~~~------------dD~i~i~~~s~nv~i~n~~~~~ 244 (397)
++||.|+|++|+........|+|.+. .++||+|++|.|..+ |..+.++.++.+|+|+||+|..
T Consensus 94 ~~NVIIrnl~i~~~~~~~~~DaI~i~g~~~~~s~nVWIDH~s~s~~~~~~~~~~~~~~Dg~idi~~~s~~VTISnn~f~~ 173 (330)
T 2qy1_A 94 AHNVIIQNMTIGLLQGGEDADSISLEGNSSGEPSKIWVDHNTVFASLTKCSGAGDASFDGGIDMKKGVHHVTVSYNYVYN 173 (330)
T ss_dssp CEEEEEESCEEESCSSGGGCCSEEEECBTTBCCEEEEEESCEEECCCCCCTTCTTCSSCCSEEEESSCEEEEEESCEEEE
T ss_pred CCeEEEeCeEEeCCCCCCCCcceeeccccCcccccEEEEeEEEEccccccccCCcceeecccccccCcceEEEEcceecc
Confidence 44444444444432211234666666 366666666666421 3344555556666666666654
Q ss_pred Cc-eeEEeeecccCCcCCEEEEEEEeeEEeC
Q 043588 245 GH-GISIGSLAKDLIEEGVQNVTVFKTVFTG 274 (397)
Q Consensus 245 ~~-gi~igs~~~~~~~~~v~nI~i~n~~~~~ 274 (397)
.+ ++-+|+.-... .....+|+|.++.+.+
T Consensus 174 h~k~~L~G~sd~~~-~~~~~~vT~h~N~f~~ 203 (330)
T 2qy1_A 174 YQKVALNGYSDSDT-KNSAARTTYHHNRFEN 203 (330)
T ss_dssp EEECCEESSSTTCG-GGGGCEEEEESCEEEE
T ss_pred CCeEEEECCCCccc-cCCCceEEEECcEEcC
Confidence 32 23344321100 0011356666666654
No 45
>3zsc_A Pectate trisaccharide-lyase; hydrolase; HET: ADA AQA; 1.94A {Thermotoga maritima}
Probab=98.67 E-value=1.3e-06 Score=82.19 Aligned_cols=76 Identities=20% Similarity=0.153 Sum_probs=48.1
Q ss_pred CCCceeeecceeEEEEecEEecC-CceEEeCCCCeeEEEEeeEEecCc-eeEEeeecccC--CcCCEEEEEEEeeEEeCC
Q 043588 200 NTDGIHVQLSTNVKITNCTIKTG-DDCIPIGPGTKNLWIERVTCGPGH-GISIGSLAKDL--IEEGVQNVTVFKTVFTGT 275 (397)
Q Consensus 200 ~~DGi~~~~s~nv~I~n~~i~~~-dD~i~i~~~s~nv~i~n~~~~~~~-gi~igs~~~~~--~~~~v~nI~i~n~~~~~~ 275 (397)
..|+|.+..++||+|++|.|..+ |..+.+..++.+|+|+||.|...+ ++-+|+.-... ....-.+|++.++.+.+.
T Consensus 115 ~~DaI~i~~s~nVWIDHcs~s~~~Dg~idi~~~s~~vTISnn~f~~h~k~~LiG~sd~~~~~~d~g~~~vT~hhN~f~~~ 194 (340)
T 3zsc_A 115 DFDYINVENSHHIWIDHITFVNGNDGAVDIKKYSNYITVSWNKFVDHDKVSLVGSSDKEDPEQAGQAYKVTYHHNYFKNL 194 (340)
T ss_dssp CCCSEEEESCEEEEEESCEEESCSSCSEEEETTCEEEEEESCEEESCSBCCEECCCTTSCHHHHHHSCEEEEESCEEESC
T ss_pred CCCeEEEecCCcEEEEeeeeccCCccceEEecCCceEEEECcEeccCceeeEeCcCCCCccccccCCcEEEEECeEecCC
Confidence 56788888888888888888774 555777666788888888887643 35555431000 000123677777777664
No 46
>1idk_A Pectin lyase A; signal, glycoprotein, multigene family; 1.93A {Aspergillus niger} SCOP: b.80.1.2 PDB: 1idj_A
Probab=98.64 E-value=6.8e-07 Score=85.18 Aligned_cols=91 Identities=15% Similarity=0.116 Sum_probs=59.3
Q ss_pred EEEe-ceecEEEEeEEEECCC--CCCCCCceeeecceeEEEEecEEec-CCceEEe-CCCCeeEEEEeeEEecCc-----
Q 043588 177 IVIN-GCKDVHIEGVTVIAPG--NSPNTDGIHVQLSTNVKITNCTIKT-GDDCIPI-GPGTKNLWIERVTCGPGH----- 246 (397)
Q Consensus 177 i~~~-~~~nv~i~n~~i~~~~--~~~~~DGi~~~~s~nv~I~n~~i~~-~dD~i~i-~~~s~nv~i~n~~~~~~~----- 246 (397)
+.+. .++||.|+|++|+... .....|+|.+..+++|+|++|.+.. +|..+.. ..++.+|+|+||.|....
T Consensus 126 l~i~~~a~NVIIrnL~i~~~~~~~~~g~DaI~i~~s~nVwIDHcs~s~~~d~~~~~g~~~s~~VTISnn~f~~~~~~s~~ 205 (359)
T 1idk_A 126 LRIVSGAENIIIQNIAVTDINPKYVWGGDAITLDDCDLVWIDHVTTARIGRQHYVLGTSADNRVSLTNNYIDGVSDYSAT 205 (359)
T ss_dssp EEECTTCEEEEEESCEEEEECTTEETSCCSEEECSCEEEEEESCEEEEESSCSEEECCCTTCEEEEESCEEECBCSCBTT
T ss_pred EEEecCCCcEEEeCeEEEcccccccccCCceeecCCCcEEEEeeEeecCCCCcEEecccCcceEEEECcEecCCcccccc
Confidence 4444 4566666666666521 1135688999889999999999986 5666654 445889999999986321
Q ss_pred -------eeEEeeecccCCcCCEEEEEEEeeEEeCC
Q 043588 247 -------GISIGSLAKDLIEEGVQNVTVFKTVFTGT 275 (397)
Q Consensus 247 -------gi~igs~~~~~~~~~v~nI~i~n~~~~~~ 275 (397)
+..+. +.-.+++|.++.+.+.
T Consensus 206 ~~G~h~~~~~L~--------G~sd~vT~hhN~f~~~ 233 (359)
T 1idk_A 206 CDGYHYWAIYLD--------GDADLVTMKGNYIYHT 233 (359)
T ss_dssp SSSBBSCCEEEC--------CSSCEEEEESCEEESB
T ss_pred cCccccceEEEE--------ecCCCeEEEceEeecC
Confidence 22221 1113788888888764
No 47
>1gq8_A Pectinesterase; hydrolase, carboxylic ester hydrolase; 1.75A {Daucus carota} SCOP: b.80.1.5
Probab=98.62 E-value=1.5e-06 Score=81.57 Aligned_cols=202 Identities=16% Similarity=0.157 Sum_probs=120.8
Q ss_pred hHHHHHHHHHHhhccCCCc----EEEEcCceEEeeceeeeccCCCcceEEEEccEEEeeccccccCCCcceEEEecccce
Q 043588 48 STQAFAKAWDAACTSTESA----TINVPKGRYLLGSVAFKGDCKSSDITFRIDGTLVAPADYRVLGQADNWLSFEGVSGV 123 (397)
Q Consensus 48 dt~aiq~Ai~~a~~~~~g~----~v~ip~G~Y~~~~~~l~~~~~s~~~~l~~~G~l~~~~~~~~~~~~~~~i~~~~~~ni 123 (397)
+-..||+||+++ +.+. +|+|+||+|.- .+.+... |. +++|.++|. +..
T Consensus 18 ~f~TIq~AI~aa---p~~~~~~~~I~I~~G~Y~E-~V~I~~~-k~-~Itl~G~g~----------------------~~t 69 (319)
T 1gq8_A 18 DYKTVSEAVAAA---PEDSKTRYVIRIKAGVYRE-NVDVPKK-KK-NIMFLGDGR----------------------TST 69 (319)
T ss_dssp SBSSHHHHHHHS---CSSCSSCEEEEECSEEEEC-CEEECTT-CC-SEEEEESCT----------------------TTE
T ss_pred CccCHHHHHHhc---cccCCceEEEEEcCCeEee-eeeccCC-Cc-cEEEEEcCC----------------------Ccc
Confidence 344599999876 3344 99999999974 4555311 23 688877640 111
Q ss_pred EEEc-eeeeCCCCcccccccCCCCCCCCceeEEEEccCCeEEEeeEEecCcc------eEEEEeceecEEEEeEEEECCC
Q 043588 124 SIIG-GALDAKGSSLWACKASGANCPDGATTLRFTNSNNIRINGLLSLNSQM------FHIVINGCKDVHIEGVTVIAPG 196 (397)
Q Consensus 124 ~I~G-G~idg~g~~~w~~~~~~~~~~~~~~~i~~~~~~nv~i~~v~i~~~~~------~~i~~~~~~nv~i~n~~i~~~~ 196 (397)
.|.+ +.. ..+. . ..+...+.+ ..++++++|++|.|... -++.+ .++.+.++||+|..
T Consensus 70 iI~~~~~~-~~g~---~--------t~~satv~v-~a~~f~~~nlt~~Nt~g~~~~qAvAl~v-~~d~~~f~~c~f~g-- 133 (319)
T 1gq8_A 70 IITASKNV-QDGS---T--------TFNSATVAA-VGAGFLARDITFQNTAGAAKHQAVALRV-GSDLSAFYRCDILA-- 133 (319)
T ss_dssp EEEECCCT-TTTC---C--------TGGGCSEEE-CSTTCEEEEEEEEECCCGGGCCCCSEEE-CCTTEEEEEEEEEC--
T ss_pred EEEecccc-cCCC---C--------ccceEEEEE-ECCCEEEEEeEeEccCCCcCCceEEEEe-cCCcEEEEEeEECc--
Confidence 1221 000 0000 0 001123444 48899999999998632 23444 58889999999997
Q ss_pred CCCCCCceeeecceeEEEEecEEecCCceEEeCCCCeeEEEEeeEEecC-----ceeEEeeecccCCcCCEEEEEEEeeE
Q 043588 197 NSPNTDGIHVQLSTNVKITNCTIKTGDDCIPIGPGTKNLWIERVTCGPG-----HGISIGSLAKDLIEEGVQNVTVFKTV 271 (397)
Q Consensus 197 ~~~~~DGi~~~~s~nv~I~n~~i~~~dD~i~i~~~s~nv~i~n~~~~~~-----~gi~igs~~~~~~~~~v~nI~i~n~~ 271 (397)
..|++.....+ ..+++|.|...-|-|. + .....++||++..- ..-.|-..+ +.+...-....|.||+
T Consensus 134 ---~QDTLy~~~~r-~~~~~c~I~G~vDFIf-G--~~~a~f~~c~i~~~~~~~~~~~~itA~~-r~~~~~~~G~vf~~c~ 205 (319)
T 1gq8_A 134 ---YQDSLYVHSNR-QFFINCFIAGTVDFIF-G--NAAVVLQDCDIHARRPGSGQKNMVTAQG-RTDPNQNTGIVIQKSR 205 (319)
T ss_dssp ---STTCEEECSSE-EEEESCEEEESSSCEE-E--SCEEEEESCEEEECCCSTTCCEEEEEEC-CCSTTCCCEEEEESCE
T ss_pred ---cceeeeecCcc-EEEEecEEEeeeeEEe-c--CCcEEEEeeEEEEecCCCCCceEEEeCC-CCCCCCCceEEEECCE
Confidence 45778877655 4899999988766664 2 34689999988641 111221221 1123345678999999
Q ss_pred EeCCcc--------eEEEEeecCCCCceEEceEEEEEEEecC
Q 043588 272 FTGTTN--------GFRIKSWARPSNGFVQGVSFIDAIMRNV 305 (397)
Q Consensus 272 ~~~~~~--------gi~i~~~~~~~~g~i~ni~~~ni~~~~~ 305 (397)
+..... ...++= ....-..++|.+..|.+.
T Consensus 206 i~~~~~~~~~~~~~~~yLGR----pW~~~sr~v~~~t~~~~~ 243 (319)
T 1gq8_A 206 IGATSDLQPVQSSFPTYLGR----PWKEYSRTVVMQSSITNV 243 (319)
T ss_dssp EEECTTTGGGGGGSCEEEEC----CSSTTCEEEEESCEECTT
T ss_pred EecCCCccccccceeEEecc----cCCCcceEEEEeccCCCc
Confidence 986532 233321 122234588888888764
No 48
>3zsc_A Pectate trisaccharide-lyase; hydrolase; HET: ADA AQA; 1.94A {Thermotoga maritima}
Probab=98.61 E-value=2.8e-06 Score=80.02 Aligned_cols=134 Identities=12% Similarity=0.096 Sum_probs=96.8
Q ss_pred eEEEEccCCeEEEeeEEecC-----------cceEEEEeceecEEEEeEEEECCCCCCCCCc-eeee-cceeEEEEecEE
Q 043588 153 TLRFTNSNNIRINGLLSLNS-----------QMFHIVINGCKDVHIEGVTVIAPGNSPNTDG-IHVQ-LSTNVKITNCTI 219 (397)
Q Consensus 153 ~i~~~~~~nv~i~~v~i~~~-----------~~~~i~~~~~~nv~i~n~~i~~~~~~~~~DG-i~~~-~s~nv~I~n~~i 219 (397)
.|.+.+++||.|++++|++. ...+|.+..++||.|++|.+... .|| +++. .+.+|+|++|.|
T Consensus 84 Gi~I~~a~NVIIrnl~i~~~~~~~~~~~~~~~~DaI~i~~s~nVWIDHcs~s~~-----~Dg~idi~~~s~~vTISnn~f 158 (340)
T 3zsc_A 84 GLVIKDAQNVIIRNIHFEGFYMEDDPRGKKYDFDYINVENSHHIWIDHITFVNG-----NDGAVDIKKYSNYITVSWNKF 158 (340)
T ss_dssp EEEEESCEEEEEESCEEECCCCTTCTTSCSSCCCSEEEESCEEEEEESCEEESC-----SSCSEEEETTCEEEEEESCEE
T ss_pred ceEEEcCceEEEeCeEEECCccccCccCCcCCCCeEEEecCCcEEEEeeeeccC-----CccceEEecCCceEEEECcEe
Confidence 58889999999999999875 34679999999999999999973 455 6776 589999999999
Q ss_pred ecCCceEEeCCCC----------eeEEEEeeEEecCc--eeEEeeecccCCcCCEEEEEEEeeEEeCC---------cce
Q 043588 220 KTGDDCIPIGPGT----------KNLWIERVTCGPGH--GISIGSLAKDLIEEGVQNVTVFKTVFTGT---------TNG 278 (397)
Q Consensus 220 ~~~dD~i~i~~~s----------~nv~i~n~~~~~~~--gi~igs~~~~~~~~~v~nI~i~n~~~~~~---------~~g 278 (397)
...+-+.-+++.. .+|++.+|.|.+.. .-++.. + .+.+.|+.+.+. ..+
T Consensus 159 ~~h~k~~LiG~sd~~~~~~d~g~~~vT~hhN~f~~~~~R~Pr~r~-------G---~~Hv~NN~~~n~~~~~~~~~~~~~ 228 (340)
T 3zsc_A 159 VDHDKVSLVGSSDKEDPEQAGQAYKVTYHHNYFKNLIQRMPRIRF-------G---MAHVFNNFYSMGLRTGVSGNVFPI 228 (340)
T ss_dssp ESCSBCCEECCCTTSCHHHHHHSCEEEEESCEEESCCBCTTEEES-------S---EEEEESCEEECCCCCSCSSCCSCC
T ss_pred ccCceeeEeCcCCCCccccccCCcEEEEECeEecCCCCCCCcccC-------C---eEEEEccEEECCccccccccceee
Confidence 9876665555421 38999999997532 222211 1 478999999981 112
Q ss_pred EEEEeecCCCCceEEceEEEEEEEecCcc
Q 043588 279 FRIKSWARPSNGFVQGVSFIDAIMRNVQF 307 (397)
Q Consensus 279 i~i~~~~~~~~g~i~ni~~~ni~~~~~~~ 307 (397)
-.+....+ ..|.+|+..+++...
T Consensus 229 yai~~~~~------a~i~~E~N~F~~~~~ 251 (340)
T 3zsc_A 229 YGVASAMG------AKVHVEGNYFMGYGA 251 (340)
T ss_dssp EEEEEETT------CEEEEESCEEECSCH
T ss_pred eeEecCCC------CEEEEECcEEECCCc
Confidence 23332222 347788888887766
No 49
>3vmv_A Pectate lyase; polysaccharide lyase family 1, beta-helix, pectolytic, polygalacturonate; 1.54A {Bacillus} PDB: 3vmw_A*
Probab=98.60 E-value=3.1e-06 Score=79.38 Aligned_cols=136 Identities=12% Similarity=0.145 Sum_probs=86.6
Q ss_pred eceecEEEEeEEEECCCCCCCCCceeeec-ceeEEEEecEEec----------CCceEEeCCCCeeEEEEeeEEecCc-e
Q 043588 180 NGCKDVHIEGVTVIAPGNSPNTDGIHVQL-STNVKITNCTIKT----------GDDCIPIGPGTKNLWIERVTCGPGH-G 247 (397)
Q Consensus 180 ~~~~nv~i~n~~i~~~~~~~~~DGi~~~~-s~nv~I~n~~i~~----------~dD~i~i~~~s~nv~i~n~~~~~~~-g 247 (397)
..++||.|+|++|+... ....|+|.+.. ++||+|++|.|.. .|..+.++.++.+|+|+||.|...+ +
T Consensus 100 ~~a~NVIIrNl~i~~~~-~~~~DaI~i~~~s~nVWIDH~s~s~~~~g~~~~~~~Dgl~di~~~s~~VTISnn~f~~h~k~ 178 (326)
T 3vmv_A 100 SNAHNIIIQNVSIHHVR-EGEGTAIEVTDDSKNVWIDHNEFYSEFPGNGDSDYYDGLVDMKRNAEYITVSWNKFENHWKT 178 (326)
T ss_dssp ESEEEEEEESCEEECCC-STTSCSEEEETTCEEEEEESCEEECCSSTTSCTTSSCCSEEECTTCEEEEEESCEEEEEEEC
T ss_pred EecceEEEECeEEEcCC-CCCCCeEEEecCCCcEEEEeeEEeccccCCcCccccCcceEecCCCceEEEEceEEecCceE
Confidence 34556666666666532 24678999996 8999999999962 3667888888999999999998643 4
Q ss_pred eEEeeecccCCcCCEEEEEEEeeEEeCCc-ceEEEEeecCCCCceEEceEEEEEEEecCc-ccEEEeeecCCCCCCCCCC
Q 043588 248 ISIGSLAKDLIEEGVQNVTVFKTVFTGTT-NGFRIKSWARPSNGFVQGVSFIDAIMRNVQ-FPIVIDQNYCPHNLNCPGQ 325 (397)
Q Consensus 248 i~igs~~~~~~~~~v~nI~i~n~~~~~~~-~gi~i~~~~~~~~g~i~ni~~~ni~~~~~~-~~i~i~~~~~~~~~~~~~~ 325 (397)
+-+|+..... ..-.+|++.++.+.+.. +.-++. .| .+++-|..+.+.. +++....
T Consensus 179 ~LiG~sd~~~--~~~~~vT~~~N~f~~~~~R~Pr~r------~G---~~Hv~NN~~~n~~~~~~~~~~------------ 235 (326)
T 3vmv_A 179 MLVGHTDNAS--LAPDKITYHHNYFNNLNSRVPLIR------YA---DVHMFNNYFKDINDTAINSRV------------ 235 (326)
T ss_dssp EEECSSSCGG--GCCEEEEEESCEEEEEEECTTEEE------SC---EEEEESCEEEEESSCSEEEET------------
T ss_pred EEECCCCCCc--ccCccEEEEeeEecCCcCcCCccc------CC---cEEEEccEEECCCceEEeecC------------
Confidence 6666531110 11257999999887631 111232 11 3556666665543 4554431
Q ss_pred ccceEEEeEEEEeE
Q 043588 326 VSGVKINDITYQDI 339 (397)
Q Consensus 326 ~~~~~i~nI~f~ni 339 (397)
.....+++-.|++.
T Consensus 236 ~a~v~~e~N~F~~~ 249 (326)
T 3vmv_A 236 GARVFVENNYFDNV 249 (326)
T ss_dssp TCEEEEESCEEEEE
T ss_pred CcEEEEEceEEECC
Confidence 13457888888887
No 50
>1pxz_A Major pollen allergen JUN A 1; parallel beta-helix, cedar pollen; 1.70A {Juniperus ashei} SCOP: b.80.1.1
Probab=98.59 E-value=8.7e-07 Score=84.17 Aligned_cols=111 Identities=12% Similarity=0.027 Sum_probs=69.1
Q ss_pred cceEEEEeceecEEEEeEEEECCCCCCCCCce-ee-ecceeEEEEecEEecCCceEEeCCC-------CeeEEEEeeEE-
Q 043588 173 QMFHIVINGCKDVHIEGVTVIAPGNSPNTDGI-HV-QLSTNVKITNCTIKTGDDCIPIGPG-------TKNLWIERVTC- 242 (397)
Q Consensus 173 ~~~~i~~~~~~nv~i~n~~i~~~~~~~~~DGi-~~-~~s~nv~I~n~~i~~~dD~i~i~~~-------s~nv~i~n~~~- 242 (397)
...+|.+..+++|.|++|++.. ..||+ ++ ..+++|+|++|.|...+.++-+++. ..+|++.+|.|
T Consensus 149 ~~DaI~i~~s~nVwIDHcs~s~-----~~Dg~id~~~~s~~vTISnn~f~~H~k~~l~G~sd~~~~d~~~~vT~~~N~f~ 223 (346)
T 1pxz_A 149 DGDAITMRNVTNAWIDHNSLSD-----CSDGLIDVTLGSTGITISNNHFFNHHKVMLLGHDDTYDDDKSMKVTVAFNQFG 223 (346)
T ss_dssp CCCSEEEESCEEEEEESCEEEC-----CSSEEEEEESSCEEEEEESCEEESEEEEEEESCCSSCGGGGGCEEEEESCEEC
T ss_pred CCCEEEEecCceEEEEeeEEec-----CCCCcEeeccCcceEEEEeeEEecCCceeEECCCCccccCCceEEEEEeeEEe
Confidence 3456888888888888888886 34666 55 4678888888888876666666542 13788888887
Q ss_pred ecC--ceeEEeeecccCCcCCEEEEEEEeeEEeCCc-ceEEEEeecCCCCceEEceEEEEEEEecCc
Q 043588 243 GPG--HGISIGSLAKDLIEEGVQNVTVFKTVFTGTT-NGFRIKSWARPSNGFVQGVSFIDAIMRNVQ 306 (397)
Q Consensus 243 ~~~--~gi~igs~~~~~~~~~v~nI~i~n~~~~~~~-~gi~i~~~~~~~~g~i~ni~~~ni~~~~~~ 306 (397)
.+. ..-++.. ..+.+.|+.+.+.. +++..... ..+.+|+..+....
T Consensus 224 ~~~~~R~Pr~r~----------g~~hv~NN~~~~~~~~~i~~~~~--------~~i~~egN~F~~~~ 272 (346)
T 1pxz_A 224 PNAGQRMPRARY----------GLVHVANNNYDPWNIYAIGGSSN--------PTILSEGNSFTAPS 272 (346)
T ss_dssp SSEEECTTEEES----------SEEEEESCEECCCSSCSEEEESC--------CEEEEESCEEECCS
T ss_pred CCccccCccEec----------ceEEEEeeEEEcccceEEeccCC--------ceEEEECCEEECCC
Confidence 432 1122211 25778888887632 44433211 23667777776654
No 51
>1qcx_A Pectin lyase B; beta-helix protein, plant cell WALL; 1.70A {Aspergillus niger} SCOP: b.80.1.2
Probab=98.57 E-value=1.7e-06 Score=82.47 Aligned_cols=64 Identities=23% Similarity=0.165 Sum_probs=39.4
Q ss_pred ceecEEEEeEEEECCCC--CCCCCceeeecceeEEEEecEEec-CCceEE-eCCCCeeEEEEeeEEec
Q 043588 181 GCKDVHIEGVTVIAPGN--SPNTDGIHVQLSTNVKITNCTIKT-GDDCIP-IGPGTKNLWIERVTCGP 244 (397)
Q Consensus 181 ~~~nv~i~n~~i~~~~~--~~~~DGi~~~~s~nv~I~n~~i~~-~dD~i~-i~~~s~nv~i~n~~~~~ 244 (397)
.++||.|+|++|+.... ....|+|.+..+++|+|++|.+.. +|..+. ...++.+|+|+||.|..
T Consensus 131 ~a~NVIIrnl~i~~~~~~~~~~~DaI~i~~s~nvwIDHcs~s~~~d~~~~~~~~~s~~vTISnn~f~~ 198 (359)
T 1qcx_A 131 GAKNVIIQNIAVTDINPKYVWGGDAITVDDSDLVWIDHVTTARIGRQHIVLGTSADNRVTISYSLIDG 198 (359)
T ss_dssp TCCCEEEESCEEEEECTTEETSCCSEEEESCCCEEEESCEEEEESSCSEEECSSCCEEEEEESCEEEC
T ss_pred CCCCEEEeCcEEEecCCcccccCceeEecCCceEEEEeeEeeccCcCceeecccccccEEEECcEecC
Confidence 34455555555553211 134578888888888888888876 444442 23357888888888863
No 52
>1xg2_A Pectinesterase 1; protein-protein complex, beta helix,four helix bundle, hydrolase/hydrolase inhibitor complex; 1.90A {Solanum lycopersicum}
Probab=98.57 E-value=1e-06 Score=82.54 Aligned_cols=201 Identities=13% Similarity=0.114 Sum_probs=119.0
Q ss_pred hHHHHHHHHHHhhccCCCc----EEEEcCceEEeeceeeeccCCCcceEEEEccEEEeeccccccCCCcceEEEecccce
Q 043588 48 STQAFAKAWDAACTSTESA----TINVPKGRYLLGSVAFKGDCKSSDITFRIDGTLVAPADYRVLGQADNWLSFEGVSGV 123 (397)
Q Consensus 48 dt~aiq~Ai~~a~~~~~g~----~v~ip~G~Y~~~~~~l~~~~~s~~~~l~~~G~l~~~~~~~~~~~~~~~i~~~~~~ni 123 (397)
|-..||+||+++ +.+. +|+|+||+|.. .+.+... |. +++|.++|. +..
T Consensus 14 ~f~TIq~AI~aa---p~~~~~~~~I~I~~G~Y~E-~V~I~~~-k~-~Itl~G~g~----------------------~~t 65 (317)
T 1xg2_A 14 DYQTLAEAVAAA---PDKSKTRYVIYVKRGTYKE-NVEVASN-KM-NLMIVGDGM----------------------YAT 65 (317)
T ss_dssp SBSSHHHHHHHS---CSSCSSCEEEEECSEEEEC-CEEECTT-SC-SEEEEESCT----------------------TTE
T ss_pred CcccHHHHHhhc---ccCCCceEEEEEcCCEEee-eeecCCC-CC-cEEEEEcCC----------------------CCc
Confidence 334599999876 3344 99999999974 4555311 24 688877640 111
Q ss_pred EEEc-ee-eeCCCCcccccccCCCCCCCCceeEEEEccCCeEEEeeEEecCcc------eEEEEeceecEEEEeEEEECC
Q 043588 124 SIIG-GA-LDAKGSSLWACKASGANCPDGATTLRFTNSNNIRINGLLSLNSQM------FHIVINGCKDVHIEGVTVIAP 195 (397)
Q Consensus 124 ~I~G-G~-idg~g~~~w~~~~~~~~~~~~~~~i~~~~~~nv~i~~v~i~~~~~------~~i~~~~~~nv~i~n~~i~~~ 195 (397)
.|.+ +. .++.+ ..+...+.+ .+++++++|++|.|... -++.+ .++.+.++||+|..
T Consensus 66 iI~~~~~~~~g~~-------------t~~satv~v-~a~~f~~~~lt~~Nt~g~~~~qAvAl~v-~~d~~~f~~c~f~g- 129 (317)
T 1xg2_A 66 TITGSLNVVDGST-------------TFRSATLAA-VGQGFILQDICIQNTAGPAKDQAVALRV-GADMSVINRCRIDA- 129 (317)
T ss_dssp EEEECCCTTTTCC-------------SGGGCSEEE-CSTTCEEESCEEEECCCGGGCCCCSEEE-CCTTEEEESCEEEC-
T ss_pred EEEecccccCCCc-------------ccceeEEEE-ECCCEEEEEeEEecccCCccCceEEEEE-eCCcEEEEEeEeCc-
Confidence 1211 00 00000 001123444 68899999999988632 23444 57888999999997
Q ss_pred CCCCCCCceeeecceeEEEEecEEecCCceEEeCCCCeeEEEEeeEEecC-----ceeEEeeecccCCcCCEEEEEEEee
Q 043588 196 GNSPNTDGIHVQLSTNVKITNCTIKTGDDCIPIGPGTKNLWIERVTCGPG-----HGISIGSLAKDLIEEGVQNVTVFKT 270 (397)
Q Consensus 196 ~~~~~~DGi~~~~s~nv~I~n~~i~~~dD~i~i~~~s~nv~i~n~~~~~~-----~gi~igs~~~~~~~~~v~nI~i~n~ 270 (397)
..|++.....+ -.+++|.|...-|-|. + .....++||++..- ..-.|-..+ +.+...-....|.||
T Consensus 130 ----~QDTLy~~~~r-~~~~~c~I~G~vDFIf-G--~~~avf~~c~i~~~~~~~~~~~~itA~~-r~~~~~~~G~vf~~c 200 (317)
T 1xg2_A 130 ----YQDTLYAHSQR-QFYRDSYVTGTVDFIF-G--NAAVVFQKCQLVARKPGKYQQNMVTAQG-RTDPNQATGTSIQFC 200 (317)
T ss_dssp ----STTCEEECSSE-EEEESCEEEESSSCEE-E--CCEEEEESCEEEECCCSTTCCEEEEEEC-CCCTTSCCEEEEESC
T ss_pred ----cccceeecCcc-EEEEeeEEEeceeEEc-C--CceEEEeeeEEEEeccCCCCccEEEecC-cCCCCCCcEEEEECC
Confidence 45677777655 4889999987666653 2 34688999988641 111221221 112334567889999
Q ss_pred EEeCCcc--------eEEEEeecCCCCceEEceEEEEEEEecC
Q 043588 271 VFTGTTN--------GFRIKSWARPSNGFVQGVSFIDAIMRNV 305 (397)
Q Consensus 271 ~~~~~~~--------gi~i~~~~~~~~g~i~ni~~~ni~~~~~ 305 (397)
++..... ...++= .......++|.+..|.+.
T Consensus 201 ~i~~~~~~~~~~~~~~~yLGR----pW~~~sr~v~~~t~~~~~ 239 (317)
T 1xg2_A 201 NIIASSDLEPVLKEFPTYLGR----PWKEYSRTVVMESYLGGL 239 (317)
T ss_dssp EEEECTTTGGGTTTSCEEEEC----CSSTTCEEEEESCEECTT
T ss_pred EEecCCCccccccceeEEeec----ccCCCceEEEEecccCCc
Confidence 9986531 233321 112234578888888764
No 53
>1air_A Pectate lyase C, PELC; pectate cleavage, pectinolyitc activity, trans-elimination; 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1o88_A 1o8d_A 1o8e_A 1o8f_A 1o8g_A 1o8h_A 1o8i_A 1o8j_A 1o8k_A 1o8l_A 1o8m_A 1plu_A 2pec_A 2ewe_A*
Probab=98.54 E-value=2e-06 Score=81.77 Aligned_cols=71 Identities=17% Similarity=0.165 Sum_probs=36.6
Q ss_pred CCCceeeecceeEEEEecEEecC--------------CceEEeCCCCeeEEEEeeEEecCc-eeEEeeecccCCcCCEEE
Q 043588 200 NTDGIHVQLSTNVKITNCTIKTG--------------DDCIPIGPGTKNLWIERVTCGPGH-GISIGSLAKDLIEEGVQN 264 (397)
Q Consensus 200 ~~DGi~~~~s~nv~I~n~~i~~~--------------dD~i~i~~~s~nv~i~n~~~~~~~-gi~igs~~~~~~~~~v~n 264 (397)
..|+|.+..++||+|++|.|..+ |..+.++.++.+|+|+||.|...+ +.-+|+... ... .+
T Consensus 129 ~~DaI~i~~s~nVWIDH~s~s~~~~~~~g~~~~~~~~DGl~di~~~s~~VTISnn~f~~h~k~~LiG~sd~---~~g-~~ 204 (353)
T 1air_A 129 DGDMIRVDDSPNVWVDHNELFAANHECDGTPDNDTTFESAVDIKGASNTVTVSYNYIHGVKKVGLDGSSSS---DTG-RN 204 (353)
T ss_dssp TCCSEEEESCCSEEEESCEEECCSCCCTTCGGGCCSSCCSEEEESSCCEEEEESCEEEEEEECCEESSSTT---CCC-CE
T ss_pred CCCeEEeeCCCcEEEEeeEEecCCcccccccccccccccceeeecccCcEEEEeeEEcCCCceeEECCCcC---CCC-ce
Confidence 44666666666666666666532 334455445666666666665432 233333211 011 45
Q ss_pred EEEEeeEEeC
Q 043588 265 VTVFKTVFTG 274 (397)
Q Consensus 265 I~i~n~~~~~ 274 (397)
|+|.++.+.+
T Consensus 205 vT~hhN~f~~ 214 (353)
T 1air_A 205 ITYHHNYYND 214 (353)
T ss_dssp EEEESCEEEE
T ss_pred EEEEceEEcC
Confidence 6666666654
No 54
>1air_A Pectate lyase C, PELC; pectate cleavage, pectinolyitc activity, trans-elimination; 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1o88_A 1o8d_A 1o8e_A 1o8f_A 1o8g_A 1o8h_A 1o8i_A 1o8j_A 1o8k_A 1o8l_A 1o8m_A 1plu_A 2pec_A 2ewe_A*
Probab=98.53 E-value=2.4e-06 Score=81.26 Aligned_cols=213 Identities=14% Similarity=0.174 Sum_probs=128.3
Q ss_pred chHHHHHHHHHHhhccCCCcEEEEcCceEEeeceeeeccCCCcceEEEEccEEEee------ccccccCCCcceEEEec-
Q 043588 47 DSTQAFAKAWDAACTSTESATINVPKGRYLLGSVAFKGDCKSSDITFRIDGTLVAP------ADYRVLGQADNWLSFEG- 119 (397)
Q Consensus 47 ddt~aiq~Ai~~a~~~~~g~~v~ip~G~Y~~~~~~l~~~~~s~~~~l~~~G~l~~~------~~~~~~~~~~~~i~~~~- 119 (397)
..-++|++||+++ . .+.. |.|+-. + ++.+.+.+.|+|... .....|......+.+..
T Consensus 24 tt~~~L~~al~~~-~-~~~~------g~~~~~-----~---~~p~vi~v~GtId~~~~~~~~~~~~~~~~~~~~~~i~~~ 87 (353)
T 1air_A 24 TSMQDIVNIIDAA-R-LDAN------GKKVKG-----G---AYPLVITYTGNEDSLINAAAANICGQWSKDPRGVEIKEF 87 (353)
T ss_dssp SSHHHHHHHHHHT-T-BCTT------SCBCTB-----C---SSCEEEEECCCCHHHHHHHHTSGGGSTTSCCCEEEEESB
T ss_pred CCHHHHHHHHHhh-c-cccc------cccccC-----C---CceEEEEEccEEeccccccccccccccccCCCceEEEec
Confidence 4457899999764 1 1111 444321 1 114555666655431 01234443334455554
Q ss_pred ccceEEEceeeeCCCCcccccccCCCCCCCCceeEEEEccCCeEEEeeEEecCc-----ceEEEEeceecEEEEeEEEEC
Q 043588 120 VSGVSIIGGALDAKGSSLWACKASGANCPDGATTLRFTNSNNIRINGLLSLNSQ-----MFHIVINGCKDVHIEGVTVIA 194 (397)
Q Consensus 120 ~~ni~I~GG~idg~g~~~w~~~~~~~~~~~~~~~i~~~~~~nv~i~~v~i~~~~-----~~~i~~~~~~nv~i~n~~i~~ 194 (397)
..|++|.| ...+ .....|.+..++||.|++++|...+ .++|.+..++||.|++|.+..
T Consensus 88 ~sn~TI~G-----~~~~------------~~g~gl~i~~~~NVIIrnl~i~~~~~~~~~~DaI~i~~s~nVWIDH~s~s~ 150 (353)
T 1air_A 88 TKGITIIG-----ANGS------------SANFGIWIKKSSDVVVQNMRIGYLPGGAKDGDMIRVDDSPNVWVDHNELFA 150 (353)
T ss_dssp CSCEEEEE-----CTTC------------CBSSEEEEESCCSEEEESCEEESCSCGGGTCCSEEEESCCSEEEESCEEEC
T ss_pred CCCEEEEe-----ccCC------------CCCceEEEeccCcEEEeccEEEeCCCCCCCCCeEEeeCCCcEEEEeeEEec
Confidence 36777765 2110 1123688889999999999998654 367999999999999999986
Q ss_pred CCCC--------CCCCce-eee-cceeEEEEecEEecCCceEEeCCC----CeeEEEEeeEEecC--ceeEEeeecccCC
Q 043588 195 PGNS--------PNTDGI-HVQ-LSTNVKITNCTIKTGDDCIPIGPG----TKNLWIERVTCGPG--HGISIGSLAKDLI 258 (397)
Q Consensus 195 ~~~~--------~~~DGi-~~~-~s~nv~I~n~~i~~~dD~i~i~~~----s~nv~i~n~~~~~~--~gi~igs~~~~~~ 258 (397)
..+. ...||. ++. .+.+|+|++|.|...+-+.-+++. ..+|++.+|.|.+. +.-++..
T Consensus 151 ~~~~~~g~~~~~~~~DGl~di~~~s~~VTISnn~f~~h~k~~LiG~sd~~~g~~vT~hhN~f~~~~~R~Pr~r~------ 224 (353)
T 1air_A 151 ANHECDGTPDNDTTFESAVDIKGASNTVTVSYNYIHGVKKVGLDGSSSSDTGRNITYHHNYYNDVNARLPLQRG------ 224 (353)
T ss_dssp CSCCCTTCGGGCCSSCCSEEEESSCCEEEEESCEEEEEEECCEESSSTTCCCCEEEEESCEEEEEEECSCEEES------
T ss_pred CCcccccccccccccccceeeecccCcEEEEeeEEcCCCceeEECCCcCCCCceEEEEceEEcCCcCCCCCCcC------
Confidence 4221 112554 554 689999999999865444434431 15799999998642 2222211
Q ss_pred cCCEEEEEEEeeEEeCC-cceEEEEeecCCCCceEEceEEEEEEEecCcccEE
Q 043588 259 EEGVQNVTVFKTVFTGT-TNGFRIKSWARPSNGFVQGVSFIDAIMRNVQFPIV 310 (397)
Q Consensus 259 ~~~v~nI~i~n~~~~~~-~~gi~i~~~~~~~~g~i~ni~~~ni~~~~~~~~i~ 310 (397)
-.+.+.|+.+.+. .+++.... ++ .|.+|++.+++...|+.
T Consensus 225 ----G~~Hv~NN~~~n~~~~~~~~~~-----~~---~i~~e~N~F~~~~~p~~ 265 (353)
T 1air_A 225 ----GLVHAYNNLYTNITGSGLNVRQ-----NG---QALIENNWFEKAINPVT 265 (353)
T ss_dssp ----SEEEEESCEEEEESSCSEEEET-----TC---EEEEESCEEEEEESSEE
T ss_pred ----ceEEEEccEEECCCCceeccCC-----Cc---EEEEEceEEECCCCceE
Confidence 1477888888873 34554421 11 36777777777666653
No 55
>2qy1_A Pectate lyase II; GAG lyase; 1.90A {Xanthomonas campestris PV} PDB: 2qxz_A 2qx3_A
Probab=98.50 E-value=3.3e-06 Score=79.78 Aligned_cols=205 Identities=15% Similarity=0.156 Sum_probs=127.0
Q ss_pred hHHHHHHHHHHhhccCCCcEEEEcCceEEeeceeeeccCCCcceEEEEccEEEeeccccccCCCcceEEEecccceEEEc
Q 043588 48 STQAFAKAWDAACTSTESATINVPKGRYLLGSVAFKGDCKSSDITFRIDGTLVAPADYRVLGQADNWLSFEGVSGVSIIG 127 (397)
Q Consensus 48 dt~aiq~Ai~~a~~~~~g~~v~ip~G~Y~~~~~~l~~~~~s~~~~l~~~G~l~~~~~~~~~~~~~~~i~~~~~~ni~I~G 127 (397)
+.+.|++||+.. +..+..+|+| .|++.+... + .....|......+.+.-.+|++|.|
T Consensus 22 t~~~L~~al~~~-~~~~p~iI~~-~G~i~~~~~--~-------------------~~c~~~~~~~~~~~l~v~sn~TI~G 78 (330)
T 2qy1_A 22 TFEAMQSAIDSY-SGSGGLVLNY-TGKFDFGTI--K-------------------DVCAQWKLPAKTVQIKNKSDVTIKG 78 (330)
T ss_dssp SHHHHHHHHHHS-CSSSCEEEEE-CCBCCGGGC--C-------------------CGGGSTTSCCCEEEEESCCSEEEEE
T ss_pred CHHHHHHHHhcc-CCCCCEEEEE-ccEEecccc--c-------------------ccccccccccceeEEEcCCCeEEEC
Confidence 345789999742 2233445554 666544320 0 0122344333445665566777754
Q ss_pred eeeeCCCCcccccccCCCCCCCCceeEEEE-ccCCeEEEeeEEecCc----ceEEEEe-----ceecEEEEeEEEECCCC
Q 043588 128 GALDAKGSSLWACKASGANCPDGATTLRFT-NSNNIRINGLLSLNSQ----MFHIVIN-----GCKDVHIEGVTVIAPGN 197 (397)
Q Consensus 128 G~idg~g~~~w~~~~~~~~~~~~~~~i~~~-~~~nv~i~~v~i~~~~----~~~i~~~-----~~~nv~i~n~~i~~~~~ 197 (397)
+.... ....|.+. .++||.|++++|.+.. .++|.+. .++||.|++|++....+
T Consensus 79 -----~~a~i------------~g~gl~i~~~~~NVIIrnl~i~~~~~~~~~DaI~i~g~~~~~s~nVWIDH~s~s~~~~ 141 (330)
T 2qy1_A 79 -----ANGSA------------ANFGIRVVGNAHNVIIQNMTIGLLQGGEDADSISLEGNSSGEPSKIWVDHNTVFASLT 141 (330)
T ss_dssp -----CTTCB------------BSSEEEEESSCEEEEEESCEEESCSSGGGCCSEEEECBTTBCCEEEEEESCEEECCCC
T ss_pred -----CCcEE------------eeeeEEEeCCCCeEEEeCeEEeCCCCCCCCcceeeccccCcccccEEEEeEEEEcccc
Confidence 22211 13358888 8999999999999764 5689998 59999999999974321
Q ss_pred ------CCCCCc-eeee-cceeEEEEecEEecCCceEEeCCC-------CeeEEEEeeEEecCc--eeEEeeecccCCcC
Q 043588 198 ------SPNTDG-IHVQ-LSTNVKITNCTIKTGDDCIPIGPG-------TKNLWIERVTCGPGH--GISIGSLAKDLIEE 260 (397)
Q Consensus 198 ------~~~~DG-i~~~-~s~nv~I~n~~i~~~dD~i~i~~~-------s~nv~i~n~~~~~~~--gi~igs~~~~~~~~ 260 (397)
....|| +++. .+.+|+|++|.|...+-+.-+++. ..+|++.+|.|.+.. .-++.. +
T Consensus 142 ~~~~~~~~~~Dg~idi~~~s~~VTISnn~f~~h~k~~L~G~sd~~~~~~~~~vT~h~N~f~~~~~R~Pr~r~-------G 214 (330)
T 2qy1_A 142 KCSGAGDASFDGGIDMKKGVHHVTVSYNYVYNYQKVALNGYSDSDTKNSAARTTYHHNRFENVESRVPLQRF-------G 214 (330)
T ss_dssp CCTTCTTCSSCCSEEEESSCEEEEEESCEEEEEEECCEESSSTTCGGGGGCEEEEESCEEEEEEECTTEEES-------S
T ss_pred ccccCCcceeecccccccCcceEEEEcceeccCCeEEEECCCCccccCCCceEEEECcEEcCCCCCCCceec-------c
Confidence 011244 4655 489999999999876555555552 158999999986532 122210 1
Q ss_pred CEEEEEEEeeEEeCC-cceEEEEeecCCCCceEEceEEEEEEEecCcccEE
Q 043588 261 GVQNVTVFKTVFTGT-TNGFRIKSWARPSNGFVQGVSFIDAIMRNVQFPIV 310 (397)
Q Consensus 261 ~v~nI~i~n~~~~~~-~~gi~i~~~~~~~~g~i~ni~~~ni~~~~~~~~i~ 310 (397)
.+.+.|+.+.+. .+++..... ..|.+|++.+++...|+.
T Consensus 215 ---~~hv~NN~~~n~~~~~i~~~~~--------~~i~~e~N~F~~~~~p~~ 254 (330)
T 2qy1_A 215 ---LSHIYNNYFNNVTTSGINVRMG--------GIAKIESNYFENIKNPVT 254 (330)
T ss_dssp ---EEEEESCEEEEECSCSEEEETT--------CEEEEESCEEEEEESSEE
T ss_pred ---eEEEEeeEEEcccceEeccCCC--------cEEEEEccEEECCCCcee
Confidence 477888888874 356554321 136777777776666654
No 56
>2nsp_A Pectinesterase A; michaelis complex, hydrolase; HET: M8C ADA; 1.70A {Erwinia chrysanthemi} PDB: 2nst_A* 2nt6_A* 2nt9_A* 2ntp_A* 2ntb_A* 2ntq_A* 1qjv_A
Probab=98.36 E-value=2e-05 Score=74.65 Aligned_cols=148 Identities=16% Similarity=0.245 Sum_probs=82.6
Q ss_pred hHHHHHHHHHHhhccCCCc---EEEEcCceEEeeceeeeccCCCcceEEEEcc---EEEeeccccccCCCcceEEEeccc
Q 043588 48 STQAFAKAWDAACTSTESA---TINVPKGRYLLGSVAFKGDCKSSDITFRIDG---TLVAPADYRVLGQADNWLSFEGVS 121 (397)
Q Consensus 48 dt~aiq~Ai~~a~~~~~g~---~v~ip~G~Y~~~~~~l~~~~~s~~~~l~~~G---~l~~~~~~~~~~~~~~~i~~~~~~ 121 (397)
+-..||+||+++ +.+. +|+|++|+|.. .|.+. |. +++|.++| ++....+..
T Consensus 17 ~f~TIq~Ai~aa---p~~~~~~~I~I~~G~Y~E-~V~I~---k~-~Itl~G~g~~~tiI~~~~~~--------------- 73 (342)
T 2nsp_A 17 TFKTIADAIASA---PAGSTPFVILIKNGVYNE-RLTIT---RN-NLHLKGESRNGAVIAAATAA--------------- 73 (342)
T ss_dssp CBSSHHHHHHTS---CSSSSCEEEEECSEEEEC-CEEEC---ST-TEEEEESCTTTEEEEECCCT---------------
T ss_pred CcchHHHHHHhc---ccCCCcEEEEEeCCEEEE-EEEEe---cC-eEEEEecCCCCeEEEecccc---------------
Confidence 344599999876 3343 99999999985 45554 24 78888875 322211110
Q ss_pred ceEEEceeeeCCCCcccccccCCCCCCCCceeEEEEccCCeEEEeeEEecCcc------------------e--EEEE-e
Q 043588 122 GVSIIGGALDAKGSSLWACKASGANCPDGATTLRFTNSNNIRINGLLSLNSQM------------------F--HIVI-N 180 (397)
Q Consensus 122 ni~I~GG~idg~g~~~w~~~~~~~~~~~~~~~i~~~~~~nv~i~~v~i~~~~~------------------~--~i~~-~ 180 (397)
++...++..+ .. .+...+.+ .+++++++|++|.|... . ++.+ .
T Consensus 74 ------~~~~~~g~~~-gT--------~~satv~v-~a~~f~a~nlt~~Nt~~~~~~~~~~~~~~~~~~~~QAvAl~v~v 137 (342)
T 2nsp_A 74 ------GTLKSDGSKW-GT--------AGSSTITI-SAKDFSAQSLTIRNDFDFPANQAKSDSDSSKIKDTQAVALYVTK 137 (342)
T ss_dssp ------TCBCTTSCBC-HH--------HHTCSEEE-CSBSCEEEEEEEEECCCHHHHHHSCTTCTTCCSCCCCCSEEECT
T ss_pred ------cccccccCcc-cc--------cceeEEEE-ECCCEEEEeeEEEccccccccccccccCCccccCCceEEEEEee
Confidence 0010011000 00 00112333 47888888888887641 1 2321 3
Q ss_pred ceecEEEEeEEEECCCCCCCCCceeeecceeEEEEecEEecCCceEEeCCCCeeEEEEeeEEe
Q 043588 181 GCKDVHIEGVTVIAPGNSPNTDGIHVQLSTNVKITNCTIKTGDDCIPIGPGTKNLWIERVTCG 243 (397)
Q Consensus 181 ~~~nv~i~n~~i~~~~~~~~~DGi~~~~s~nv~I~n~~i~~~dD~i~i~~~s~nv~i~n~~~~ 243 (397)
.++.+.+++|+|.. ..|.+.... .+..+++|.|...=|-|. + .....+++|++.
T Consensus 138 ~~d~~~f~~c~f~G-----~QDTLy~~~-gr~~~~~c~I~G~vDFIF-G--~a~a~f~~c~i~ 191 (342)
T 2nsp_A 138 SGDRAYFKDVSLVG-----YQATLYVSG-GRSFFSDCRISGTVDFIF-G--DGTALFNNCDLV 191 (342)
T ss_dssp TCBSEEEEEEEEEC-----STTCEEECS-SEEEEESCEEEESEEEEE-E--SSEEEEESCEEE
T ss_pred ccCcEEEEeeEEec-----ccceEEECC-CCEEEEcCEEEeceEEEe-C--CceEEEecCEEE
Confidence 56777777777775 345566554 356777777776545442 2 235777777764
No 57
>1vbl_A Pectate lyase 47; PL 47, thermostable, bacillus subtilis, pectin, calcium ION; 1.91A {Bacillus SP}
Probab=98.35 E-value=2.9e-06 Score=82.25 Aligned_cols=101 Identities=19% Similarity=0.249 Sum_probs=70.8
Q ss_pred eEEEEeceecEEEEeEEEECCCC---------------CCCCCceeeecceeEEEEecEEecC-----------------
Q 043588 175 FHIVINGCKDVHIEGVTVIAPGN---------------SPNTDGIHVQLSTNVKITNCTIKTG----------------- 222 (397)
Q Consensus 175 ~~i~~~~~~nv~i~n~~i~~~~~---------------~~~~DGi~~~~s~nv~I~n~~i~~~----------------- 222 (397)
.++.+..++||.|+|++|+...+ ....|+|.+..++||+|++|.|..+
T Consensus 148 ~gl~i~~~~NVIIrNl~i~~~~~~~p~~~p~~~~~~~~~~~~DaI~i~~s~nVWIDHcs~s~~~~~d~~~~~~~Gr~~~~ 227 (416)
T 1vbl_A 148 GGFLIKNVDNVIIRNIEFEAPLDYFPEWDPTDGTLGEWNSEYDSISIEGSSHIWIDHNTFTDGDHPDRSLGTYFGRPFQQ 227 (416)
T ss_dssp CEEEEESCEEEEEESCEEECCCCSSCEEETTSTTTCEEECCCCSEEEESCEEEEEESCEEECTTCCGGGSCEETTEECCC
T ss_pred CEEEeecCceEEEeCeEEEcCccccccccccccccccccCCCceEEecCCceEEEEccEEecCCCcccccccccCcceee
Confidence 35566667777788887775421 1246899999999999999999864
Q ss_pred -CceEEeCCCCeeEEEEeeEEecCc-eeEEeeecccCCcCCEEEEEEEeeEEeCC
Q 043588 223 -DDCIPIGPGTKNLWIERVTCGPGH-GISIGSLAKDLIEEGVQNVTVFKTVFTGT 275 (397)
Q Consensus 223 -dD~i~i~~~s~nv~i~n~~~~~~~-gi~igs~~~~~~~~~v~nI~i~n~~~~~~ 275 (397)
|..+.++.++.+|+|+||+|...+ ++-+|+.-..........|+|.++.|.+.
T Consensus 228 ~DGl~Di~~~s~~VTISnn~f~~h~k~~LiG~sd~~~~d~g~~~VT~hhN~f~~~ 282 (416)
T 1vbl_A 228 HDGALDIKNSSDFITISYNVFTNHDKVTLIGASDSRMADSGHLRVTLHHNYYKNV 282 (416)
T ss_dssp CCCSEEEESSCEEEEEESCEEEEEEECCEECSCTTCGGGTTCCCEEEESCEEEEE
T ss_pred cccceeeecCCCcEEEEeeEEcCCCceeEeCCCCCCcccCCceEEEEECcEecCC
Confidence 666777777999999999998643 45666542111111234699999999764
No 58
>2x3h_A K5 lyase, K5A lyase; bacteriophage, glycosaminoglycan; 1.60A {Enterobacteria phage k1-5}
Probab=98.33 E-value=0.00033 Score=63.37 Aligned_cols=229 Identities=14% Similarity=0.165 Sum_probs=137.8
Q ss_pred eeEEeeccCccCCCCcchHHHHHHHHHHhhccCCCcEEEEcCceEEeeceeeeccCCCcceEEEEc--cEEEeecccccc
Q 043588 31 TTYNVLSFGAKGNGVTDSTQAFAKAWDAACTSTESATINVPKGRYLLGSVAFKGDCKSSDITFRID--GTLVAPADYRVL 108 (397)
Q Consensus 31 ~~~~v~d~GA~~dg~tddt~aiq~Ai~~a~~~~~g~~v~ip~G~Y~~~~~~l~~~~~s~~~~l~~~--G~l~~~~~~~~~ 108 (397)
+...+++|||.+|-.+||+++|.+.|+.- ..|.+|.|+|....+.+. ..-|++. |+|+--...
T Consensus 63 rvls~k~fga~~~~~~d~~~~~~~sl~s~------~~v~i~~gvf~ss~i~~~------~c~l~g~g~g~~~~~~~~--- 127 (542)
T 2x3h_A 63 RVLTSKPFGAAGDATTDDTEVIAASLNSQ------KAVTISDGVFSSSGINSN------YCNLDGRGSGVLSHRSST--- 127 (542)
T ss_dssp HBCBSSCTTCCCBSSSCCHHHHHHHHTSS------SCEECCSEEEEECCEEES------CCEEECTTTEEEEECSSS---
T ss_pred eeeecccccccCCcccCcHHHHHhhhccc------ccEecccccccccccccc------cccccccCCceeeeecCC---
Confidence 46788999999999999999999999642 469999999988777763 7888887 477643222
Q ss_pred CCCcceEEEe-----cccceEEEceeeeCCCCcccccccCCCCCCCCceeEEEEccCCeEEEeeEEecCcceEEEEec--
Q 043588 109 GQADNWLSFE-----GVSGVSIIGGALDAKGSSLWACKASGANCPDGATTLRFTNSNNIRINGLLSLNSQMFHIVING-- 181 (397)
Q Consensus 109 ~~~~~~i~~~-----~~~ni~I~GG~idg~g~~~w~~~~~~~~~~~~~~~i~~~~~~nv~i~~v~i~~~~~~~i~~~~-- 181 (397)
+..+.|. ..++++|.| +... -....+-+.+....+|+++++++.|....++.+..
T Consensus 128 ---gn~lvfn~p~~g~ls~~ti~~-----nk~~----------ds~qg~qvs~~gg~dvsv~~i~fsn~~g~gfsliayp 189 (542)
T 2x3h_A 128 ---GNYLVFNNPRTGRLSNITVES-----NKAT----------DTTQGQQVSLAGGSDVTVSDVNFSNVKGTGFSLIAYP 189 (542)
T ss_dssp ---SCCEEEESCEEEEEEEEEEEC-----CCSS----------TTCBCCSEEEESCEEEEEEEEEEEEECSBEEEEEEEC
T ss_pred ---CCEEEEeCCCCcceeeEEEec-----ccCC----------ccccceEEEecCCCcceEeeeeeeecCCCceeEEEcC
Confidence 2223332 245666665 2110 01112347888899999999999887666654432
Q ss_pred ----eecEEEEeEEEECCCCCCCCC-c-eeeecceeEEEEecEEec--CCceEEeCCCCeeEEEEeeEEecCc-eeEEee
Q 043588 182 ----CKDVHIEGVTVIAPGNSPNTD-G-IHVQLSTNVKITNCTIKT--GDDCIPIGPGTKNLWIERVTCGPGH-GISIGS 252 (397)
Q Consensus 182 ----~~nv~i~n~~i~~~~~~~~~D-G-i~~~~s~nv~I~n~~i~~--~dD~i~i~~~s~nv~i~n~~~~~~~-gi~igs 252 (397)
-+...|++++=.-...+.|.. | +-++++.|-.|++..-++ .-.++.++...+.-.++|..=..++ =..-|+
T Consensus 190 ~~~~p~g~~i~~irg~y~g~a~nk~agcvl~dss~nslid~via~nypqfgavelk~~a~ynivsnvig~~cqhv~yngt 269 (542)
T 2x3h_A 190 NDAPPDGLMIKGIRGSYSGYATNKAAGCVLADSSVNSLIDNVIAKNYPQFGAVELKGTASYNIVSNVIGADCQHVTYNGT 269 (542)
T ss_dssp SSSCCBSCEEEEEEEEECSCCTTCSEEEEEEESCBSCEEEEEEEESCCTTEEEEEETTCBSCEEEEEEEESCSEEEEEEC
T ss_pred CCCCCCceEEeccccceeccccccccceEEeccchhhhhhhhhhhcCCccceEEeecceeeehhhhhhhccceeEEECCc
Confidence 245677777765444433332 3 344678899999998888 4567778775444445555433332 233444
Q ss_pred ecccCCcCCEEEEEEEeeEEeCCcceEEEEeecCCCCceEEceEEE
Q 043588 253 LAKDLIEEGVQNVTVFKTVFTGTTNGFRIKSWARPSNGFVQGVSFI 298 (397)
Q Consensus 253 ~~~~~~~~~v~nI~i~n~~~~~~~~gi~i~~~~~~~~g~i~ni~~~ 298 (397)
++.-. ..|-.|...--.+..++..+.. .+ .+..|++|.+.
T Consensus 270 e~~~a----psnn~i~~vmannpkyaavv~g-kg-s~nlisdvlvd 309 (542)
T 2x3h_A 270 EGPIA----PSNNLIKGVMANNPKYAAVVAG-KG-STNLISDVLVD 309 (542)
T ss_dssp SSSCC----CCSCEEEEEEEESCSSEEEECC-SC-BSCEEEEEEEE
T ss_pred cCCcC----CccchhhHhhcCCCceEEEEEe-cC-ccceehheeee
Confidence 43221 1222344444444444433321 11 33455555543
No 59
>2o04_A Pectate lyase, PL; hexasaccharide compound II, calciums; HET: ADA; 1.70A {Bacillus subtilis} PDB: 2nzm_A* 2o0v_A* 2o0w_A 2o17_A* 2o1d_A* 2bsp_A 1bn8_A 3krg_A*
Probab=98.25 E-value=5.7e-06 Score=79.81 Aligned_cols=100 Identities=16% Similarity=0.235 Sum_probs=70.9
Q ss_pred eEEEEeceecEEEEeEEEECCCC---------------CCCCCceeeecceeEEEEecEEecC-----------------
Q 043588 175 FHIVINGCKDVHIEGVTVIAPGN---------------SPNTDGIHVQLSTNVKITNCTIKTG----------------- 222 (397)
Q Consensus 175 ~~i~~~~~~nv~i~n~~i~~~~~---------------~~~~DGi~~~~s~nv~I~n~~i~~~----------------- 222 (397)
.++.+.. +||.|+|++|+...+ ....|+|.+..++||+|++|.|..+
T Consensus 143 ~gl~i~~-~NVIIrnl~i~~~~~~~p~~~p~~~~~~~~~~~~DaI~i~~s~nVWIDHcs~s~~~~~d~~~~~~~G~~~~~ 221 (399)
T 2o04_A 143 GNFQIKS-DNVIIRNIEFQDAYDYFPQWDPTDGSSGNWNSQYDNITINGGTHIWIDHCTFNDGSRPDSTSPKYYGRKYQH 221 (399)
T ss_dssp CEEEECS-EEEEEESCEEECCCCSSCEEETTSSTTCEEECCCCSEEEESCEEEEEESCEEECTTCCGGGSCEETTEECCC
T ss_pred CEEEeeC-CCEEEeCeEEecCccccccccccccccccccCCCCeEEecCCCcEEEEeeeeecCCCccccccccccceeec
Confidence 3566666 788888888876422 1256899999999999999999864
Q ss_pred -CceEEeCCCCeeEEEEeeEEecCc-eeEEeeecccCCcCCEEEEEEEeeEEeCC
Q 043588 223 -DDCIPIGPGTKNLWIERVTCGPGH-GISIGSLAKDLIEEGVQNVTVFKTVFTGT 275 (397)
Q Consensus 223 -dD~i~i~~~s~nv~i~n~~~~~~~-gi~igs~~~~~~~~~v~nI~i~n~~~~~~ 275 (397)
|..+.++.++.+|+|+||.|...+ ++-+|+.-.........+|+|.++.+.+.
T Consensus 222 ~Dgl~Di~~~s~~VTISnn~f~~h~k~~LiG~sd~~~~d~g~~~vT~h~N~f~~~ 276 (399)
T 2o04_A 222 HDGQTDASNGANYITMSYNYYHDHDKSSIFGSSDSKTSDDGKLKITLHHNRYKNI 276 (399)
T ss_dssp CCCSEEEETTCEEEEEESCEEEEEEECCEESCCTTCGGGTTCCCEEEESCEEEEE
T ss_pred cccceeeeccCCcEEEEeeEEcCCCceeEeCCCCCCccccCceeEEEECcEecCC
Confidence 666778878999999999998643 45666541111111234799999999764
No 60
>1idk_A Pectin lyase A; signal, glycoprotein, multigene family; 1.93A {Aspergillus niger} SCOP: b.80.1.2 PDB: 1idj_A
Probab=98.24 E-value=3.7e-05 Score=73.22 Aligned_cols=136 Identities=17% Similarity=0.144 Sum_probs=92.1
Q ss_pred eEEEE-ccCCeEEEeeEEecC------cceEEEEeceecEEEEeEEEECCCCCCCCCcee---eecceeEEEEecEEecC
Q 043588 153 TLRFT-NSNNIRINGLLSLNS------QMFHIVINGCKDVHIEGVTVIAPGNSPNTDGIH---VQLSTNVKITNCTIKTG 222 (397)
Q Consensus 153 ~i~~~-~~~nv~i~~v~i~~~------~~~~i~~~~~~nv~i~n~~i~~~~~~~~~DGi~---~~~s~nv~I~n~~i~~~ 222 (397)
.|.+. .++||.|++++|++. ..++|.+..+++|.|++|++.... |+.. ...+++|+|++|.|...
T Consensus 125 gl~i~~~a~NVIIrnL~i~~~~~~~~~g~DaI~i~~s~nVwIDHcs~s~~~-----d~~~~~g~~~s~~VTISnn~f~~~ 199 (359)
T 1idk_A 125 GLRIVSGAENIIIQNIAVTDINPKYVWGGDAITLDDCDLVWIDHVTTARIG-----RQHYVLGTSADNRVSLTNNYIDGV 199 (359)
T ss_dssp CEEECTTCEEEEEESCEEEEECTTEETSCCSEEECSCEEEEEESCEEEEES-----SCSEEECCCTTCEEEEESCEEECB
T ss_pred eEEEecCCCcEEEeCeEEEcccccccccCCceeecCCCcEEEEeeEeecCC-----CCcEEecccCcceEEEECcEecCC
Confidence 37887 899999999999873 235799999999999999999632 3333 34689999999999743
Q ss_pred C---------c--eEEeCCCCeeEEEEeeEEecCce--eEEeeecccCCcCCEEEEEEEeeEEeCC-cceEEEEeecCCC
Q 043588 223 D---------D--CIPIGPGTKNLWIERVTCGPGHG--ISIGSLAKDLIEEGVQNVTVFKTVFTGT-TNGFRIKSWARPS 288 (397)
Q Consensus 223 d---------D--~i~i~~~s~nv~i~n~~~~~~~g--i~igs~~~~~~~~~v~nI~i~n~~~~~~-~~gi~i~~~~~~~ 288 (397)
+ + ...+...+.++++.++.|....+ -++. .-..+.+.|+.+.+. .+++.+..
T Consensus 200 ~~~s~~~~G~h~~~~~L~G~sd~vT~hhN~f~~~~~R~Pr~r---------~g~~~hv~NN~~~n~~~~~i~~~~----- 265 (359)
T 1idk_A 200 SDYSATCDGYHYWAIYLDGDADLVTMKGNYIYHTSGRSPKVQ---------DNTLLHAVNNYWYDISGHAFEIGE----- 265 (359)
T ss_dssp CSCBTTSSSBBSCCEEECCSSCEEEEESCEEESBCSCTTEEC---------TTCEEEEESCEEEEEEEEEEEECT-----
T ss_pred cccccccCccccceEEEEecCCCeEEEceEeecCcccCcccc---------CCceEEEECCEEecccceEEeccC-----
Confidence 2 1 23343336799999999975321 1221 112588888888873 34444321
Q ss_pred CceEEceEEEEEEEecCcccEE
Q 043588 289 NGFVQGVSFIDAIMRNVQFPIV 310 (397)
Q Consensus 289 ~g~i~ni~~~ni~~~~~~~~i~ 310 (397)
. ..+.+|++.+++...|+.
T Consensus 266 ~---~~i~~e~N~F~~~~~p~~ 284 (359)
T 1idk_A 266 G---GYVLAEGNVFQNVDTVLE 284 (359)
T ss_dssp T---CEEEEESCEEEEEEEEEE
T ss_pred C---cEEEEEccEEECCCCcee
Confidence 1 246777777776665543
No 61
>2inu_A Insulin fructotransferase; right-handed parallel beta-helix, lyase; 1.80A {Bacillus SP} PDB: 2inv_A*
Probab=98.24 E-value=4e-05 Score=73.10 Aligned_cols=130 Identities=11% Similarity=0.153 Sum_probs=98.0
Q ss_pred CCeEEEeeEEecC-----c------ceEEEEec-eecEEEEeEEEECCCCCCCCCceeeecceeEEEEecEEecCCceEE
Q 043588 160 NNIRINGLLSLNS-----Q------MFHIVING-CKDVHIEGVTVIAPGNSPNTDGIHVQLSTNVKITNCTIKTGDDCIP 227 (397)
Q Consensus 160 ~nv~i~~v~i~~~-----~------~~~i~~~~-~~nv~i~n~~i~~~~~~~~~DGi~~~~s~nv~I~n~~i~~~dD~i~ 227 (397)
++|++++++|.+. . .-+|.+.. .+++.|++++|.. +.-||.+..+++.+|++++|.....||.
T Consensus 136 s~V~~~~v~I~G~~~~~~G~s~~~~dAGI~v~~~~d~~~I~nn~i~~-----~~fGI~l~~a~~~~I~~N~I~e~GNgI~ 210 (410)
T 2inu_A 136 SGIVFRDFCLDGVGFTPGKNSYHNGKTGIEVASDNDSFHITGMGFVY-----LEHALIVRGADALRVNDNMIAECGNCVE 210 (410)
T ss_dssp ECCEEESCEEECCCCSSSTTSCCCSCEEEEECSCEESCEEESCEEES-----CSEEEEETTEESCEEESCEEESSSEEEE
T ss_pred CCcEECCEEEECCEeecCCCCcccCceeEEEeccCCeEEEECCEEec-----ccEEEEEccCCCcEEECCEEEecCCcee
Confidence 5666666666554 3 34788886 8899999999997 5579999999999999999998788999
Q ss_pred eCCCCeeEEEEeeEEecC-ce--eEEeeecccCCcCCEEEEEEEeeEE-eCCcceEEEEeecCCCCceEEceEEEEEEEe
Q 043588 228 IGPGTKNLWIERVTCGPG-HG--ISIGSLAKDLIEEGVQNVTVFKTVF-TGTTNGFRIKSWARPSNGFVQGVSFIDAIMR 303 (397)
Q Consensus 228 i~~~s~nv~i~n~~~~~~-~g--i~igs~~~~~~~~~v~nI~i~n~~~-~~~~~gi~i~~~~~~~~g~i~ni~~~ni~~~ 303 (397)
++..++...|+|+.+..+ +| +.+ ....+.+|+++.+ .+..+|+.+.... +..|++.++.
T Consensus 211 L~G~~~~~~I~~N~i~~~~dG~gIyl---------~ns~~~~I~~N~i~~~~R~gIh~m~s~--------~~~i~~N~f~ 273 (410)
T 2inu_A 211 LTGAGQATIVSGNHMGAGPDGVTLLA---------ENHEGLLVTGNNLFPRGRSLIEFTGCN--------RCSVTSNRLQ 273 (410)
T ss_dssp ECSCEESCEEESCEEECCTTSEEEEE---------ESEESCEEESCEECSCSSEEEEEESCB--------SCEEESCEEE
T ss_pred eccccccceEecceeeecCCCCEEEE---------EeCCCCEEECCCcccCcceEEEEEccC--------CCEEECCEEe
Confidence 998789999999999864 34 655 2456788999977 5588999886432 2455555555
Q ss_pred cCcccEEE
Q 043588 304 NVQFPIVI 311 (397)
Q Consensus 304 ~~~~~i~i 311 (397)
+...++.+
T Consensus 274 ~~~~Gi~~ 281 (410)
T 2inu_A 274 GFYPGMLR 281 (410)
T ss_dssp ESSSCSEE
T ss_pred cceeEEEE
Confidence 55554443
No 62
>1qcx_A Pectin lyase B; beta-helix protein, plant cell WALL; 1.70A {Aspergillus niger} SCOP: b.80.1.2
Probab=98.19 E-value=6.6e-05 Score=71.51 Aligned_cols=134 Identities=15% Similarity=0.127 Sum_probs=87.2
Q ss_pred EEEE-ccCCeEEEeeEEecCc------ceEEEEeceecEEEEeEEEECCCCCCCCCcee---eecceeEEEEecEEecCC
Q 043588 154 LRFT-NSNNIRINGLLSLNSQ------MFHIVINGCKDVHIEGVTVIAPGNSPNTDGIH---VQLSTNVKITNCTIKTGD 223 (397)
Q Consensus 154 i~~~-~~~nv~i~~v~i~~~~------~~~i~~~~~~nv~i~n~~i~~~~~~~~~DGi~---~~~s~nv~I~n~~i~~~d 223 (397)
|.+. .++||.|++++|++.. ..+|.+..+++|.|++|++.... |+.. ...+++|+|++|.|....
T Consensus 126 l~i~~~a~NVIIrnl~i~~~~~~~~~~~DaI~i~~s~nvwIDHcs~s~~~-----d~~~~~~~~~s~~vTISnn~f~~~~ 200 (359)
T 1qcx_A 126 LRVVSGAKNVIIQNIAVTDINPKYVWGGDAITVDDSDLVWIDHVTTARIG-----RQHIVLGTSADNRVTISYSLIDGRS 200 (359)
T ss_dssp EEEETTCCCEEEESCEEEEECTTEETSCCSEEEESCCCEEEESCEEEEES-----SCSEEECSSCCEEEEEESCEEECBC
T ss_pred EEEecCCCCEEEeCcEEEecCCcccccCceeEecCCceEEEEeeEeeccC-----cCceeecccccccEEEECcEecCCc
Confidence 7887 8999999999998742 25789999999999999999633 3332 336899999999997421
Q ss_pred -----------ceEEeCCCCeeEEEEeeEEecCce--eEEeeecccCCcCCEEEEEEEeeEEeCC-cceEEEEeecCCCC
Q 043588 224 -----------DCIPIGPGTKNLWIERVTCGPGHG--ISIGSLAKDLIEEGVQNVTVFKTVFTGT-TNGFRIKSWARPSN 289 (397)
Q Consensus 224 -----------D~i~i~~~s~nv~i~n~~~~~~~g--i~igs~~~~~~~~~v~nI~i~n~~~~~~-~~gi~i~~~~~~~~ 289 (397)
...-+...+.++++.++.|....+ -++. .-..+.+.|+.+.+. .+++... .
T Consensus 201 ~~s~~~~G~H~~~~~l~G~sd~vT~~~N~f~~~~~R~Pr~r---------~~~~~hv~NN~~~n~~~~a~~~~-----~- 265 (359)
T 1qcx_A 201 DYSATCNGHHYWGVYLDGSNDMVTLKGNYFYNLSGRMPKVQ---------GNTLLHAVNNLFHNFDGHAFEIG-----T- 265 (359)
T ss_dssp SSBTTSSSBBSCCEEECCSSEEEEEESCEEESBCSCTTEEC---------SSEEEEEESCEEEEEEEEEEEEC-----T-
T ss_pred cccccCcccccceeEEecCCCCeehcccEeccCcccCceec---------CCceEEEEccEEECccCeEEecC-----C-
Confidence 122232235688888888764321 1111 012577788877763 2333321 1
Q ss_pred ceEEceEEEEEEEecCcccE
Q 043588 290 GFVQGVSFIDAIMRNVQFPI 309 (397)
Q Consensus 290 g~i~ni~~~ni~~~~~~~~i 309 (397)
-..|.+|++.+++...|+
T Consensus 266 --~~~i~~e~N~F~~~~~~~ 283 (359)
T 1qcx_A 266 --GGYVLAEGNVFQDVNVVV 283 (359)
T ss_dssp --TEEEEEESCEEEEEEEEE
T ss_pred --CceEEEEeeEEECCCccc
Confidence 124667777776655554
No 63
>1pe9_A Pectate lyase A; parallel beta helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1ooc_A 1jta_A 1jrg_A
Probab=98.17 E-value=1.3e-05 Score=76.19 Aligned_cols=96 Identities=24% Similarity=0.364 Sum_probs=66.3
Q ss_pred eceecEEEEeEEEECCCCC-----------CCCCceeeec-ceeEEEEecEEecC------------------CceEEeC
Q 043588 180 NGCKDVHIEGVTVIAPGNS-----------PNTDGIHVQL-STNVKITNCTIKTG------------------DDCIPIG 229 (397)
Q Consensus 180 ~~~~nv~i~n~~i~~~~~~-----------~~~DGi~~~~-s~nv~I~n~~i~~~------------------dD~i~i~ 229 (397)
..++||.|+|++|+...+. ...|+|.+.. ++||+|++|.|..+ |..+.++
T Consensus 111 ~~~~NVIIrNl~i~~~~d~~p~~~~~~g~~~~~DaI~i~~~s~nVWIDHcs~s~~~~~~~~~~~~~G~~~~~~DgllDi~ 190 (361)
T 1pe9_A 111 DGTNNVIIRNVYIQTPIDVEPHYEKGDGWNAEWDAMNITNGAHHVWIDHVTISDGNFTDDMYTTKDGETYVQHDGALDIK 190 (361)
T ss_dssp GTCEEEEEESCEEECCCCSSCEEETTTEEECCCCSEEEETTCEEEEEESCEEECTTSCGGGCCEETTEECCCCCCSEEEC
T ss_pred CCCceEEEeCeEEEcCcccccccccccCcccCCceEEeecCCceEEEEccEeecccccccccccccCcceeeccceeeee
Confidence 4556666666666643210 2478999999 99999999999863 6678888
Q ss_pred CCCeeEEEEeeEEecCc-eeEEeeecccC-CcCCEEEEEEEeeEEeCC
Q 043588 230 PGTKNLWIERVTCGPGH-GISIGSLAKDL-IEEGVQNVTVFKTVFTGT 275 (397)
Q Consensus 230 ~~s~nv~i~n~~~~~~~-gi~igs~~~~~-~~~~v~nI~i~n~~~~~~ 275 (397)
.++.+|+|++|+|..-. ++-+|+..... ....-..|++.++.+.+.
T Consensus 191 ~~s~~VTiS~n~f~~h~k~~LiG~sd~~~~~d~g~~~vT~hhN~f~~~ 238 (361)
T 1pe9_A 191 RGSDYVTISNSLIDQHDKTMLIGHSDSNGSQDKGKLHVTLFNNVFNRV 238 (361)
T ss_dssp TTCEEEEEESCEEEEEEECEEESCCTTCHHHHTTCCEEEEESCEEEEE
T ss_pred cCCCcEEEEeeEEcCCCceeEecCCCCCcccccCcceEEEECeEEcCc
Confidence 88999999999997643 45565531100 001234799999999764
No 64
>1pe9_A Pectate lyase A; parallel beta helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1ooc_A 1jta_A 1jrg_A
Probab=98.05 E-value=6.3e-05 Score=71.58 Aligned_cols=111 Identities=21% Similarity=0.272 Sum_probs=73.0
Q ss_pred EEE---EccCCeEEEeeEEecC---------------cceEEEEec-eecEEEEeEEEECCCCC------------CCCC
Q 043588 154 LRF---TNSNNIRINGLLSLNS---------------QMFHIVING-CKDVHIEGVTVIAPGNS------------PNTD 202 (397)
Q Consensus 154 i~~---~~~~nv~i~~v~i~~~---------------~~~~i~~~~-~~nv~i~n~~i~~~~~~------------~~~D 202 (397)
|.+ .+++||.|++++|.+. ..++|.+.. ++||.|++|++....+. ...|
T Consensus 105 l~i~~~~~~~NVIIrNl~i~~~~d~~p~~~~~~g~~~~~DaI~i~~~s~nVWIDHcs~s~~~~~~~~~~~~~G~~~~~~D 184 (361)
T 1pe9_A 105 LIIDGTDGTNNVIIRNVYIQTPIDVEPHYEKGDGWNAEWDAMNITNGAHHVWIDHVTISDGNFTDDMYTTKDGETYVQHD 184 (361)
T ss_dssp EEEEGGGTCEEEEEESCEEECCCCSSCEEETTTEEECCCCSEEEETTCEEEEEESCEEECTTSCGGGCCEETTEECCCCC
T ss_pred EEEecCCCCceEEEeCeEEEcCcccccccccccCcccCCceEEeecCCceEEEEccEeecccccccccccccCcceeecc
Confidence 555 4677777777777642 134688888 99999999999864210 0135
Q ss_pred c-eeee-cceeEEEEecEEecCCceEEeCCC---------CeeEEEEeeEEecCc--eeEEeeecccCCcCCEEEEEEEe
Q 043588 203 G-IHVQ-LSTNVKITNCTIKTGDDCIPIGPG---------TKNLWIERVTCGPGH--GISIGSLAKDLIEEGVQNVTVFK 269 (397)
Q Consensus 203 G-i~~~-~s~nv~I~n~~i~~~dD~i~i~~~---------s~nv~i~n~~~~~~~--gi~igs~~~~~~~~~v~nI~i~n 269 (397)
| +++. .+.+|+|++|.|...+-+.-+++. ..+|++.+|.|.+.. .-++. .-.+.+.|
T Consensus 185 gllDi~~~s~~VTiS~n~f~~h~k~~LiG~sd~~~~~d~g~~~vT~hhN~f~~~~~R~Pr~R----------~G~~Hv~N 254 (361)
T 1pe9_A 185 GALDIKRGSDYVTISNSLIDQHDKTMLIGHSDSNGSQDKGKLHVTLFNNVFNRVTERAPRVR----------YGSIHSFN 254 (361)
T ss_dssp CSEEECTTCEEEEEESCEEEEEEECEEESCCTTCHHHHTTCCEEEEESCEEEEEEECSSEES----------SCEEEEES
T ss_pred ceeeeecCCCcEEEEeeEEcCCCceeEecCCCCCcccccCcceEEEECeEEcCccccCcccc----------cceEEEEc
Confidence 5 4565 589999999999875555555542 126999999986421 22221 11378889
Q ss_pred eEEeC
Q 043588 270 TVFTG 274 (397)
Q Consensus 270 ~~~~~ 274 (397)
+.+.+
T Consensus 255 N~~~~ 259 (361)
T 1pe9_A 255 NVFKG 259 (361)
T ss_dssp CEEEE
T ss_pred ceEec
Confidence 98864
No 65
>3vmv_A Pectate lyase; polysaccharide lyase family 1, beta-helix, pectolytic, polygalacturonate; 1.54A {Bacillus} PDB: 3vmw_A*
Probab=97.94 E-value=0.00076 Score=63.14 Aligned_cols=134 Identities=15% Similarity=0.164 Sum_probs=92.1
Q ss_pred EEEEccCCeEEEeeEEecCc---ceEEEEec-eecEEEEeEEEECCC----CCCCCCce-eee-cceeEEEEecEEecCC
Q 043588 154 LRFTNSNNIRINGLLSLNSQ---MFHIVING-CKDVHIEGVTVIAPG----NSPNTDGI-HVQ-LSTNVKITNCTIKTGD 223 (397)
Q Consensus 154 i~~~~~~nv~i~~v~i~~~~---~~~i~~~~-~~nv~i~n~~i~~~~----~~~~~DGi-~~~-~s~nv~I~n~~i~~~d 223 (397)
|.+..++||.|++++|.+.. ..+|.+.. ++||.|++|++.... +....||. ++. .+.+|+|++|.|...+
T Consensus 97 l~i~~a~NVIIrNl~i~~~~~~~~DaI~i~~~s~nVWIDH~s~s~~~~g~~~~~~~Dgl~di~~~s~~VTISnn~f~~h~ 176 (326)
T 3vmv_A 97 IRLSNAHNIIIQNVSIHHVREGEGTAIEVTDDSKNVWIDHNEFYSEFPGNGDSDYYDGLVDMKRNAEYITVSWNKFENHW 176 (326)
T ss_dssp EEEESEEEEEEESCEEECCCSTTSCSEEEETTCEEEEEESCEEECCSSTTSCTTSSCCSEEECTTCEEEEEESCEEEEEE
T ss_pred EEEEecceEEEECeEEEcCCCCCCCeEEEecCCCcEEEEeeEEeccccCCcCccccCcceEecCCCceEEEEceEEecCc
Confidence 67788999999999999764 56799997 999999999997421 11223554 664 4899999999999766
Q ss_pred ceEEeCCC------CeeEEEEeeEEecCc--eeEEeeecccCCcCCEEEEEEEeeEEeCC-cceEEEEeecCCCCceEEc
Q 043588 224 DCIPIGPG------TKNLWIERVTCGPGH--GISIGSLAKDLIEEGVQNVTVFKTVFTGT-TNGFRIKSWARPSNGFVQG 294 (397)
Q Consensus 224 D~i~i~~~------s~nv~i~n~~~~~~~--gi~igs~~~~~~~~~v~nI~i~n~~~~~~-~~gi~i~~~~~~~~g~i~n 294 (397)
-+.-+++. -.+|++.+|+|.+.. .-++.. -.+.+.|+.+.+. .+++.... + ..
T Consensus 177 k~~LiG~sd~~~~~~~~vT~~~N~f~~~~~R~Pr~r~----------G~~Hv~NN~~~n~~~~~~~~~~--~------a~ 238 (326)
T 3vmv_A 177 KTMLVGHTDNASLAPDKITYHHNYFNNLNSRVPLIRY----------ADVHMFNNYFKDINDTAINSRV--G------AR 238 (326)
T ss_dssp ECEEECSSSCGGGCCEEEEEESCEEEEEEECTTEEES----------CEEEEESCEEEEESSCSEEEET--T------CE
T ss_pred eEEEECCCCCCcccCccEEEEeeEecCCcCcCCcccC----------CcEEEEccEEECCCceEEeecC--C------cE
Confidence 56666652 147999999986432 122211 1578889998874 35655432 1 23
Q ss_pred eEEEEEEEecC
Q 043588 295 VSFIDAIMRNV 305 (397)
Q Consensus 295 i~~~ni~~~~~ 305 (397)
|.+|+..+++.
T Consensus 239 v~~e~N~F~~~ 249 (326)
T 3vmv_A 239 VFVENNYFDNV 249 (326)
T ss_dssp EEEESCEEEEE
T ss_pred EEEEceEEECC
Confidence 56666666654
No 66
>1pcl_A Pectate lyase E; lyase (acting on polysaccharides); 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1
Probab=97.94 E-value=0.0002 Score=68.00 Aligned_cols=113 Identities=17% Similarity=0.229 Sum_probs=79.1
Q ss_pred eEEEEccCCeEEEeeEEecCc---------------ceEEEEeceecEEEEeEEEECCCCC---------C---CCCce-
Q 043588 153 TLRFTNSNNIRINGLLSLNSQ---------------MFHIVINGCKDVHIEGVTVIAPGNS---------P---NTDGI- 204 (397)
Q Consensus 153 ~i~~~~~~nv~i~~v~i~~~~---------------~~~i~~~~~~nv~i~n~~i~~~~~~---------~---~~DGi- 204 (397)
.|.+..++||.|++++|.+.. ..+|.+..++||.|++|++....+. . ..||.
T Consensus 97 gl~i~~~~NVIIrnl~i~~~~~~~p~~~~~~g~~~~~DaI~i~~s~nVWIDH~s~s~~~~~d~~~~~~~G~~~~~~Dgl~ 176 (355)
T 1pcl_A 97 SLVIKGVKNVILRNLYIETPVDVAPHYESGDGWNAEWDAAVIDNSTNVWVDHVTISDGSFTDDKYTTKDGEKYVQHDGAL 176 (355)
T ss_pred EEEEecCCeEEEeeeEEEcCcccccccccccCccccCceEEecCCCcEEEEeeEEeccccCccccccccCccccccccce
Confidence 367778999999999998531 3578999999999999999864210 0 13653
Q ss_pred eee-cceeEEEEecEEecCCceEEeCCC---------CeeEEEEeeEEecCc--eeEEeeecccCCcCCEEEEEEEeeEE
Q 043588 205 HVQ-LSTNVKITNCTIKTGDDCIPIGPG---------TKNLWIERVTCGPGH--GISIGSLAKDLIEEGVQNVTVFKTVF 272 (397)
Q Consensus 205 ~~~-~s~nv~I~n~~i~~~dD~i~i~~~---------s~nv~i~n~~~~~~~--gi~igs~~~~~~~~~v~nI~i~n~~~ 272 (397)
++. .+++|+|++|.|...+-+.-+++. ..+|++.+|.|.+.. .-++. .-.+.+.|+.+
T Consensus 177 Di~~~s~~VTiS~n~f~~h~k~~LiG~sd~~~~~d~g~~~vT~hhN~f~~~~~R~PrvR----------~G~~Hv~NN~~ 246 (355)
T 1pcl_A 177 DIKKGSDYVTISYSRFELHDKTILIGHSDSNGSQDSGKLRVTFHNNVFDRVTERAPRVR----------FGSIHAYNNVY 246 (355)
T ss_pred eeecCCCcEEEEeeEEcCCCceEEeCCCCCCcccccCcceEEEECcEEeCCcccCCcee----------cceEEEEcceE
Confidence 555 589999999999876656555542 127999999996532 22221 01377888888
Q ss_pred eCC
Q 043588 273 TGT 275 (397)
Q Consensus 273 ~~~ 275 (397)
.+.
T Consensus 247 ~~~ 249 (355)
T 1pcl_A 247 LGD 249 (355)
T ss_pred Ecc
Confidence 753
No 67
>1vbl_A Pectate lyase 47; PL 47, thermostable, bacillus subtilis, pectin, calcium ION; 1.91A {Bacillus SP}
Probab=97.87 E-value=0.0001 Score=71.33 Aligned_cols=113 Identities=14% Similarity=0.161 Sum_probs=79.9
Q ss_pred eEEEEccCCeEEEeeEEecC-------------------cceEEEEeceecEEEEeEEEECCCCC------------CCC
Q 043588 153 TLRFTNSNNIRINGLLSLNS-------------------QMFHIVINGCKDVHIEGVTVIAPGNS------------PNT 201 (397)
Q Consensus 153 ~i~~~~~~nv~i~~v~i~~~-------------------~~~~i~~~~~~nv~i~n~~i~~~~~~------------~~~ 201 (397)
.|.+..++||.|++++|.+. ...+|.+..++||.|++|++....+. ...
T Consensus 149 gl~i~~~~NVIIrNl~i~~~~~~~p~~~p~~~~~~~~~~~~DaI~i~~s~nVWIDHcs~s~~~~~d~~~~~~~Gr~~~~~ 228 (416)
T 1vbl_A 149 GFLIKNVDNVIIRNIEFEAPLDYFPEWDPTDGTLGEWNSEYDSISIEGSSHIWIDHNTFTDGDHPDRSLGTYFGRPFQQH 228 (416)
T ss_dssp EEEEESCEEEEEESCEEECCCCSSCEEETTSTTTCEEECCCCSEEEESCEEEEEESCEEECTTCCGGGSCEETTEECCCC
T ss_pred EEEeecCceEEEeCeEEEcCccccccccccccccccccCCCceEEecCCceEEEEccEEecCCCcccccccccCcceeec
Confidence 47888899999999999753 13468999999999999999964210 114
Q ss_pred Cce-eee-cceeEEEEecEEecCCceEEeCCC--------CeeEEEEeeEEecC--ceeEEeeecccCCcCCEEEEEEEe
Q 043588 202 DGI-HVQ-LSTNVKITNCTIKTGDDCIPIGPG--------TKNLWIERVTCGPG--HGISIGSLAKDLIEEGVQNVTVFK 269 (397)
Q Consensus 202 DGi-~~~-~s~nv~I~n~~i~~~dD~i~i~~~--------s~nv~i~n~~~~~~--~gi~igs~~~~~~~~~v~nI~i~n 269 (397)
||. ++. .+.+|+|++|.|...+-+.-+++. -.+|++.+|+|.+. +.-++. .+ .+.+.|
T Consensus 229 DGl~Di~~~s~~VTISnn~f~~h~k~~LiG~sd~~~~d~g~~~VT~hhN~f~~~~~R~Pr~R-------~G---~~Hv~N 298 (416)
T 1vbl_A 229 DGALDIKNSSDFITISYNVFTNHDKVTLIGASDSRMADSGHLRVTLHHNYYKNVTQRLPRVR-------FG---QVHIYN 298 (416)
T ss_dssp CCSEEEESSCEEEEEESCEEEEEEECCEECSCTTCGGGTTCCCEEEESCEEEEEEECSSEES-------SC---EEEEES
T ss_pred ccceeeecCCCcEEEEeeEEcCCCceeEeCCCCCCcccCCceEEEEECcEecCCccCCcccc-------cc---eEEEEc
Confidence 553 555 589999999999976555555542 13699999998653 222221 11 488899
Q ss_pred eEEeCC
Q 043588 270 TVFTGT 275 (397)
Q Consensus 270 ~~~~~~ 275 (397)
+.+.+.
T Consensus 299 N~~~n~ 304 (416)
T 1vbl_A 299 NYYEFS 304 (416)
T ss_dssp CEEEEC
T ss_pred ceEECC
Confidence 999753
No 68
>3grh_A YBHC, acyl-COA thioester hydrolase YBGC; beta-helix, periplasmic, lipoprotein, outer membrane, carbohydrate esterase family 8; 1.70A {Escherichia coli k-12}
Probab=97.73 E-value=0.0022 Score=61.56 Aligned_cols=47 Identities=26% Similarity=0.220 Sum_probs=32.6
Q ss_pred hHHHHHHHHHHhhcc--CCCcEEEEcCceEEeeceeeeccCCCcceEEEEcc
Q 043588 48 STQAFAKAWDAACTS--TESATINVPKGRYLLGSVAFKGDCKSSDITFRIDG 97 (397)
Q Consensus 48 dt~aiq~Ai~~a~~~--~~g~~v~ip~G~Y~~~~~~l~~~~~s~~~~l~~~G 97 (397)
+-..||+||+++... ....+|+|.+|+|... |.+... |. +++|.++|
T Consensus 88 ~f~TIqeAVdaap~~~~~~r~vI~Ik~GvY~E~-V~Ip~~-K~-~ItL~G~G 136 (422)
T 3grh_A 88 THTTIQAAVDAAIIKRTNKRQYIAVMPGEYQGT-VYVPAA-PG-GITLYGTG 136 (422)
T ss_dssp CBSSHHHHHHHHHTTCCSSCEEEEECSEEEESC-EEECCC-SS-CEEEEECS
T ss_pred CcCCHHHHHHhchhcCCCccEEEEEeCCeEeee-EEecCC-CC-cEEEEecc
Confidence 445699999876321 2346899999999864 555321 25 89998876
No 69
>2o04_A Pectate lyase, PL; hexasaccharide compound II, calciums; HET: ADA; 1.70A {Bacillus subtilis} PDB: 2nzm_A* 2o0v_A* 2o0w_A 2o17_A* 2o1d_A* 2bsp_A 1bn8_A 3krg_A*
Probab=97.71 E-value=0.0002 Score=68.98 Aligned_cols=112 Identities=14% Similarity=0.203 Sum_probs=78.8
Q ss_pred eEEEEccCCeEEEeeEEecC-------------------cceEEEEeceecEEEEeEEEECCCCC------------CCC
Q 043588 153 TLRFTNSNNIRINGLLSLNS-------------------QMFHIVINGCKDVHIEGVTVIAPGNS------------PNT 201 (397)
Q Consensus 153 ~i~~~~~~nv~i~~v~i~~~-------------------~~~~i~~~~~~nv~i~n~~i~~~~~~------------~~~ 201 (397)
.|.+.. +||.|++++|++. ...+|.+..++||.|++|++....+. ...
T Consensus 144 gl~i~~-~NVIIrnl~i~~~~~~~p~~~p~~~~~~~~~~~~DaI~i~~s~nVWIDHcs~s~~~~~d~~~~~~~G~~~~~~ 222 (399)
T 2o04_A 144 NFQIKS-DNVIIRNIEFQDAYDYFPQWDPTDGSSGNWNSQYDNITINGGTHIWIDHCTFNDGSRPDSTSPKYYGRKYQHH 222 (399)
T ss_dssp EEEECS-EEEEEESCEEECCCCSSCEEETTSSTTCEEECCCCSEEEESCEEEEEESCEEECTTCCGGGSCEETTEECCCC
T ss_pred EEEeeC-CCEEEeCeEEecCccccccccccccccccccCCCCeEEecCCCcEEEEeeeeecCCCccccccccccceeecc
Confidence 467777 9999999999753 12468899999999999999964210 013
Q ss_pred Cce-eee-cceeEEEEecEEecCCceEEeCCC--------CeeEEEEeeEEecC--ceeEEeeecccCCcCCEEEEEEEe
Q 043588 202 DGI-HVQ-LSTNVKITNCTIKTGDDCIPIGPG--------TKNLWIERVTCGPG--HGISIGSLAKDLIEEGVQNVTVFK 269 (397)
Q Consensus 202 DGi-~~~-~s~nv~I~n~~i~~~dD~i~i~~~--------s~nv~i~n~~~~~~--~gi~igs~~~~~~~~~v~nI~i~n 269 (397)
||. ++. .+.+|+|++|.|...+-+.-+++. -.+|++.+|.|.+. +.-++. . -.+.+.|
T Consensus 223 Dgl~Di~~~s~~VTISnn~f~~h~k~~LiG~sd~~~~d~g~~~vT~h~N~f~~~~~R~Pr~R-------~---G~~Hv~N 292 (399)
T 2o04_A 223 DGQTDASNGANYITMSYNYYHDHDKSSIFGSSDSKTSDDGKLKITLHHNRYKNIVQAAPRVR-------F---GQVHVYN 292 (399)
T ss_dssp CCSEEEETTCEEEEEESCEEEEEEECCEESCCTTCGGGTTCCCEEEESCEEEEEEECTTEES-------S---CEEEEES
T ss_pred ccceeeeccCCcEEEEeeEEcCCCceeEeCCCCCCccccCceeEEEECcEecCCcccCCCcc-------c---ceEEEEc
Confidence 554 555 589999999999976555555542 13899999998643 222221 0 1488999
Q ss_pred eEEeCC
Q 043588 270 TVFTGT 275 (397)
Q Consensus 270 ~~~~~~ 275 (397)
+.+.+.
T Consensus 293 N~~~n~ 298 (399)
T 2o04_A 293 NYYEGS 298 (399)
T ss_dssp CEEECC
T ss_pred ceEECC
Confidence 999764
No 70
>1ru4_A Pectate lyase, PEL9A; parallel beta-helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.9
Probab=97.60 E-value=0.00022 Score=69.13 Aligned_cols=140 Identities=10% Similarity=0.046 Sum_probs=97.1
Q ss_pred eEEEEccCCeEEEeeEEecCcceEEEEeceecEEEEeEEEECCCCCCCCCceeeecc-eeEEEEecEEecCC--------
Q 043588 153 TLRFTNSNNIRINGLLSLNSQMFHIVINGCKDVHIEGVTVIAPGNSPNTDGIHVQLS-TNVKITNCTIKTGD-------- 223 (397)
Q Consensus 153 ~i~~~~~~nv~i~~v~i~~~~~~~i~~~~~~nv~i~n~~i~~~~~~~~~DGi~~~~s-~nv~I~n~~i~~~d-------- 223 (397)
.|.+ ..++++|++++|.+....+|.+.. .+.+|++|+|... ...||.+... .+.+|++|.+....
T Consensus 109 ~i~i-~~~~~~i~gl~I~n~g~~GI~v~g-s~~~i~n~~i~~n----~~~GI~l~~~~s~n~I~nn~i~~N~d~~~~g~~ 182 (400)
T 1ru4_A 109 GFYV-TGDYWYFKGVEVTRAGYQGAYVIG-SHNTFENTAFHHN----RNTGLEINNGGSYNTVINSDAYRNYDPKKNGSM 182 (400)
T ss_dssp SEEE-CSSCEEEESEEEESCSSCSEEECS-SSCEEESCEEESC----SSCSEEECTTCCSCEEESCEEECCCCTTTTTSS
T ss_pred EEEE-ECCeEEEEeEEEEeCCCCcEEEeC-CCcEEEeEEEECC----CceeEEEEcccCCeEEEceEEEcccCccccCcc
Confidence 4555 789999999999888777888876 7889999999973 3349999874 48899999998632
Q ss_pred -ceEEeCCC-CeeEEEEeeEEecC--ceeEEeeecccCCcCCEEEEEEEeeEEeCCc-------------ceEEEEeecC
Q 043588 224 -DCIPIGPG-TKNLWIERVTCGPG--HGISIGSLAKDLIEEGVQNVTVFKTVFTGTT-------------NGFRIKSWAR 286 (397)
Q Consensus 224 -D~i~i~~~-s~nv~i~n~~~~~~--~gi~igs~~~~~~~~~v~nI~i~n~~~~~~~-------------~gi~i~~~~~ 286 (397)
|+++++.. .+..+|++|+++.. .|+.+- .....++|+||...+.. .|+.+..
T Consensus 183 ~dG~~~~~~~g~Gn~~~~~~~~~N~ddGidl~--------~~~~~v~i~nn~a~~Ng~~~~~~n~~~gngnGf~lgg--- 251 (400)
T 1ru4_A 183 ADGFGPKQKQGPGNRFVGCRAWENSDDGFDLF--------DSPQKVVIENSWAFRNGINYWNDSAFAGNGNGFKLGG--- 251 (400)
T ss_dssp CCSEEECTTCCSCCEEESCEEESCSSCSEECT--------TCCSCCEEESCEEESTTCCCSCCTTCCCCCCSEECCC---
T ss_pred cceEEEEecccCCeEEECCEEeecCCCcEEEE--------ecCCCEEEEeEEEECCccccccccccccCCCCEEEec---
Confidence 67887642 47889999998753 566652 12234789999987653 2333321
Q ss_pred CCCceEEceEEEEEEEecCc-ccEEE
Q 043588 287 PSNGFVQGVSFIDAIMRNVQ-FPIVI 311 (397)
Q Consensus 287 ~~~g~i~ni~~~ni~~~~~~-~~i~i 311 (397)
.....+.+++|+...+.. .++..
T Consensus 252 --~~~~~~~~v~nn~a~~N~~~G~~~ 275 (400)
T 1ru4_A 252 --NQAVGNHRITRSVAFGNVSKGFDQ 275 (400)
T ss_dssp --TTCCCCCEEESCEEESCSSEEEEC
T ss_pred --cCCcCCEEEEeeEEECCcCcCEee
Confidence 123345677777776543 45533
No 71
>2vbk_A Tailspike-protein; viral adhesion protein, viral protein, hydrolase, endorhamnosidase, right-handed parallel beta-helix; 1.25A {Enterobacteria phage SF6} PDB: 2vbe_A 2vbm_A*
Probab=97.16 E-value=0.0014 Score=62.84 Aligned_cols=124 Identities=15% Similarity=0.142 Sum_probs=75.6
Q ss_pred ceEEEEccEEEeeccccccCC----CcceEEEecccceEEEc-ee-eeCCCCcccccccCCCCCCCCceeEEEEccCCeE
Q 043588 90 DITFRIDGTLVAPADYRVLGQ----ADNWLSFEGVSGVSIIG-GA-LDAKGSSLWACKASGANCPDGATTLRFTNSNNIR 163 (397)
Q Consensus 90 ~~~l~~~G~l~~~~~~~~~~~----~~~~i~~~~~~ni~I~G-G~-idg~g~~~w~~~~~~~~~~~~~~~i~~~~~~nv~ 163 (397)
|++|.+.|++.... ..|.. .+.. ....+++|.+.+ .. +.- +..| .+++..|++++
T Consensus 147 NIaITG~GTIDG~g--~n~t~e~~~~Rq~-~~~~fdnV~Vn~Vt~~v~~--Sg~W--------------TIhPi~Cqnvt 207 (514)
T 2vbk_A 147 NIRVTGNNTCNGID--TNITAEDSVIRQV-YGWVFDNVMVNEVETAYLM--QGLW--------------HSKFIACQAGT 207 (514)
T ss_dssp SCEEECCSSSEEEE--ESCCTTCSSCCCE-ESEEEESCEEEEEEEEEEE--ESEE--------------EEEEESCEEEE
T ss_pred EEEEECCCeEeCCC--CCccccceeeecc-ceEEeeeEEEEeEEEeEec--cCcE--------------EEeEeccCcee
Confidence 78888877665421 11211 0111 111257888888 32 211 2245 48999999999
Q ss_pred EE-eeEEecCcceEEEEeceecEEEEeEEEECCCCCC-CCCceee------ecceeEEEEecEEecCCceEEeCCC----
Q 043588 164 IN-GLLSLNSQMFHIVINGCKDVHIEGVTVIAPGNSP-NTDGIHV------QLSTNVKITNCTIKTGDDCIPIGPG---- 231 (397)
Q Consensus 164 i~-~v~i~~~~~~~i~~~~~~nv~i~n~~i~~~~~~~-~~DGi~~------~~s~nv~I~n~~i~~~dD~i~i~~~---- 231 (397)
+. ++.+. .+|+||.|.||+|...+|.- -.-|.-. ..|+++. +.+|.++|.
T Consensus 208 ~r~gL~f~---------eSCrNV~IsnC~FsVGDdciaiksGk~~~~~~~~~~se~~~---------hgav~igSE~m~~ 269 (514)
T 2vbk_A 208 CRVGLHFL---------GQCVSVSVSSCHFSRGNYSADESFGIRIQPQTYAWSSEAVR---------SEAIILDSETMCI 269 (514)
T ss_dssp EEEEEEEE---------SCCEEEEEESCEEECTTSCCTTCEEEEEECBCCTTTSSCBC---------CEEEEEESSEEEE
T ss_pred cccCcccc---------CCCCeEEEeccEEecCcceeeeecCceecccccCCcchhcc---------cccEEECchhhcc
Confidence 88 66664 38999999999999876521 1112211 1355555 567777774
Q ss_pred -Cee-EEEEeeEEecCceeEE
Q 043588 232 -TKN-LWIERVTCGPGHGISI 250 (397)
Q Consensus 232 -s~n-v~i~n~~~~~~~gi~i 250 (397)
.+| ++|++|.|...+-+.+
T Consensus 270 Gvk~~v~v~~Clf~~td~~~~ 290 (514)
T 2vbk_A 270 GFKNAVYVHDCLDLHMEQLDL 290 (514)
T ss_dssp SCSEEEEESCCEEEEEESEEE
T ss_pred cccccEEEEeeeccCCccccc
Confidence 588 9999999876554433
No 72
>3t9g_A Pectate lyase; PL3, parallel beta-helix; HET: GOL; 1.50A {Caldicellulosiruptor bescii}
Probab=96.59 E-value=0.13 Score=43.42 Aligned_cols=128 Identities=15% Similarity=0.197 Sum_probs=60.9
Q ss_pred cEEEEeEEEECCCCCCCCCceeeecceeEEEEecEEec-CCceEEeCCCCeeEEEEeeEEecCce--eEEeeecccCCcC
Q 043588 184 DVHIEGVTVIAPGNSPNTDGIHVQLSTNVKITNCTIKT-GDDCIPIGPGTKNLWIERVTCGPGHG--ISIGSLAKDLIEE 260 (397)
Q Consensus 184 nv~i~n~~i~~~~~~~~~DGi~~~~s~nv~I~n~~i~~-~dD~i~i~~~s~nv~i~n~~~~~~~g--i~igs~~~~~~~~ 260 (397)
..+++|+.|-. ...||||..+ +-+++|+.+.. +.|++.+++ +..++|.+.-...+.. +..-
T Consensus 53 GaTLkNvIIG~----~~~dGIHC~G--~ctl~NVwwedVcEDA~T~kg-~g~~~I~GGgA~~A~DKV~Q~N--------- 116 (196)
T 3t9g_A 53 GANLKNVIIGA----PGCDGIHCYG--DNVVENVVWEDVGEDALTVKS-EGVVEVIGGSAKEAADKVFQLN--------- 116 (196)
T ss_dssp TCEEEEEEECS----CCTTCEEECS--SEEEEEEEESSCCSCSEEECS-SEEEEEESCEEEEEEEEEEEEC---------
T ss_pred CCEEEEEEECC----CCcCcEEEcC--CEeEEEEEeeeeeceeeEEcC-CCeEEEECCCccCCCceEEEEC---------
Confidence 34455555543 2456666653 44566666655 666666664 4455555555444332 2221
Q ss_pred CEEEEEEEeeEEeCCcceEEEEeecCCCCceEEceEEEEEEEecCcccEEEeeecCCCCCCCCCCccceEEEeEEEEeEE
Q 043588 261 GVQNVTVFKTVFTGTTNGFRIKSWARPSNGFVQGVSFIDAIMRNVQFPIVIDQNYCPHNLNCPGQVSGVKINDITYQDIR 340 (397)
Q Consensus 261 ~v~nI~i~n~~~~~~~~gi~i~~~~~~~~g~i~ni~~~ni~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~i~nI~f~ni~ 340 (397)
.--.+.|+|....+ .|-...+... -..=++|.++|+++.+....+.= .. + ......++|+.+.|+.
T Consensus 117 g~Gtv~I~nF~~~~--~GKl~RSCGn--c~~~r~v~i~~v~~~n~k~~l~r-td--S-------~~~~~~~~n~~~~~~~ 182 (196)
T 3t9g_A 117 APCTFKVKNFTATN--IGKLVRQNGN--TTFKVVIYLEDVTLNNVKSCVAK-SD--S-------PVSELWYHNLNVNNCK 182 (196)
T ss_dssp SSEEEEEEEEEEEE--EEEEEEECTT--CCSCEEEEEEEEEEEEEEEEEEE-CC--C-------TTCEEEEEEEEEEEEE
T ss_pred CCceEEEeeEEEcc--CCEEEEcCCC--CCceeEEEEeCeEEeCCEEEEEE-cC--C-------CCCEEEEecceecCCC
Confidence 11234455555543 2333333211 11225666666666665543321 11 0 1134567777777765
Q ss_pred E
Q 043588 341 G 341 (397)
Q Consensus 341 ~ 341 (397)
-
T Consensus 183 ~ 183 (196)
T 3t9g_A 183 T 183 (196)
T ss_dssp E
T ss_pred c
Confidence 3
No 73
>1gq8_A Pectinesterase; hydrolase, carboxylic ester hydrolase; 1.75A {Daucus carota} SCOP: b.80.1.5
Probab=96.54 E-value=0.02 Score=53.39 Aligned_cols=113 Identities=9% Similarity=0.060 Sum_probs=79.1
Q ss_pred ceecEEEEeEEEECCCCC--CCCCceeeecceeEEEEecEEecCCceEEeCCCCeeEEEEeeEEecCceeEEeeecccCC
Q 043588 181 GCKDVHIEGVTVIAPGNS--PNTDGIHVQLSTNVKITNCTIKTGDDCIPIGPGTKNLWIERVTCGPGHGISIGSLAKDLI 258 (397)
Q Consensus 181 ~~~nv~i~n~~i~~~~~~--~~~DGi~~~~s~nv~I~n~~i~~~dD~i~i~~~s~nv~i~n~~~~~~~gi~igs~~~~~~ 258 (397)
.+++++++|++|.+.... ...-++.+ .+.++.++||.|....|.+.... .+ ..++||++.+.-++-+|..
T Consensus 92 ~a~~f~~~nlt~~Nt~g~~~~qAvAl~v-~~d~~~f~~c~f~g~QDTLy~~~-~r-~~~~~c~I~G~vDFIfG~~----- 163 (319)
T 1gq8_A 92 VGAGFLARDITFQNTAGAAKHQAVALRV-GSDLSAFYRCDILAYQDSLYVHS-NR-QFFINCFIAGTVDFIFGNA----- 163 (319)
T ss_dssp CSTTCEEEEEEEEECCCGGGCCCCSEEE-CCTTEEEEEEEEECSTTCEEECS-SE-EEEESCEEEESSSCEEESC-----
T ss_pred ECCCEEEEEeEeEccCCCcCCceEEEEe-cCCcEEEEEeEECccceeeeecC-cc-EEEEecEEEeeeeEEecCC-----
Confidence 478999999999986431 23445666 46889999999999888888876 34 4999999998777767642
Q ss_pred cCCEEEEEEEeeEEeCCcc----eEEEEeecCCCCceEEceEEEEEEEecCc
Q 043588 259 EEGVQNVTVFKTVFTGTTN----GFRIKSWARPSNGFVQGVSFIDAIMRNVQ 306 (397)
Q Consensus 259 ~~~v~nI~i~n~~~~~~~~----gi~i~~~~~~~~g~i~ni~~~ni~~~~~~ 306 (397)
...|+||++..... .-.|..........-....|.|+++....
T Consensus 164 -----~a~f~~c~i~~~~~~~~~~~~itA~~r~~~~~~~G~vf~~c~i~~~~ 210 (319)
T 1gq8_A 164 -----AVVLQDCDIHARRPGSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATS 210 (319)
T ss_dssp -----EEEEESCEEEECCCSTTCCEEEEEECCCSTTCCCEEEEESCEEEECT
T ss_pred -----cEEEEeeEEEEecCCCCCceEEEeCCCCCCCCCceEEEECCEEecCC
Confidence 47899999976421 12343332112233445789999998644
No 74
>1xg2_A Pectinesterase 1; protein-protein complex, beta helix,four helix bundle, hydrolase/hydrolase inhibitor complex; 1.90A {Solanum lycopersicum}
Probab=96.42 E-value=0.021 Score=53.22 Aligned_cols=113 Identities=10% Similarity=0.075 Sum_probs=79.2
Q ss_pred ceecEEEEeEEEECCCCC--CCCCceeeecceeEEEEecEEecCCceEEeCCCCeeEEEEeeEEecCceeEEeeecccCC
Q 043588 181 GCKDVHIEGVTVIAPGNS--PNTDGIHVQLSTNVKITNCTIKTGDDCIPIGPGTKNLWIERVTCGPGHGISIGSLAKDLI 258 (397)
Q Consensus 181 ~~~nv~i~n~~i~~~~~~--~~~DGi~~~~s~nv~I~n~~i~~~dD~i~i~~~s~nv~i~n~~~~~~~gi~igs~~~~~~ 258 (397)
.+++++++|++|.+.... ...-++.+ .+.++.++||.|....|.+.... .+ -.++||++.+.-++-+|..
T Consensus 88 ~a~~f~~~~lt~~Nt~g~~~~qAvAl~v-~~d~~~f~~c~f~g~QDTLy~~~-~r-~~~~~c~I~G~vDFIfG~~----- 159 (317)
T 1xg2_A 88 VGQGFILQDICIQNTAGPAKDQAVALRV-GADMSVINRCRIDAYQDTLYAHS-QR-QFYRDSYVTGTVDFIFGNA----- 159 (317)
T ss_dssp CSTTCEEESCEEEECCCGGGCCCCSEEE-CCTTEEEESCEEECSTTCEEECS-SE-EEEESCEEEESSSCEEECC-----
T ss_pred ECCCEEEEEeEEecccCCccCceEEEEE-eCCcEEEEEeEeCccccceeecC-cc-EEEEeeEEEeceeEEcCCc-----
Confidence 678999999999986431 23445666 46889999999999888888876 34 4999999998777777652
Q ss_pred cCCEEEEEEEeeEEeCCcc----eEEEEeecCCCCceEEceEEEEEEEecCc
Q 043588 259 EEGVQNVTVFKTVFTGTTN----GFRIKSWARPSNGFVQGVSFIDAIMRNVQ 306 (397)
Q Consensus 259 ~~~v~nI~i~n~~~~~~~~----gi~i~~~~~~~~g~i~ni~~~ni~~~~~~ 306 (397)
...|+||++..... .-.|..........-....|.|+++....
T Consensus 160 -----~avf~~c~i~~~~~~~~~~~~itA~~r~~~~~~~G~vf~~c~i~~~~ 206 (317)
T 1xg2_A 160 -----AVVFQKCQLVARKPGKYQQNMVTAQGRTDPNQATGTSIQFCNIIASS 206 (317)
T ss_dssp -----EEEEESCEEEECCCSTTCCEEEEEECCCCTTSCCEEEEESCEEEECT
T ss_pred -----eEEEeeeEEEEeccCCCCccEEEecCcCCCCCCcEEEEECCEEecCC
Confidence 38899999976421 12333332112233445789999998644
No 75
>3t9g_A Pectate lyase; PL3, parallel beta-helix; HET: GOL; 1.50A {Caldicellulosiruptor bescii}
Probab=96.40 E-value=0.29 Score=41.32 Aligned_cols=133 Identities=11% Similarity=0.020 Sum_probs=93.9
Q ss_pred cCCeEEEeeEEecCcceEEEEeceecEEEEeEEEECCCCCCCCCceeeecceeEEEEecEEecCCceEEeCCCCeeEEEE
Q 043588 159 SNNIRINGLLSLNSQMFHIVINGCKDVHIEGVTVIAPGNSPNTDGIHVQLSTNVKITNCTIKTGDDCIPIGPGTKNLWIE 238 (397)
Q Consensus 159 ~~nv~i~~v~i~~~~~~~i~~~~~~nv~i~n~~i~~~~~~~~~DGi~~~~s~nv~I~n~~i~~~dD~i~i~~~s~nv~i~ 238 (397)
-+..+++|+.|-.....+||.. -+.+|+|+....- ..|.+.+.++..++|.+.-.++.+|-+--..+...+.|+
T Consensus 51 e~GaTLkNvIIG~~~~dGIHC~--G~ctl~NVwwedV----cEDA~T~kg~g~~~I~GGgA~~A~DKV~Q~Ng~Gtv~I~ 124 (196)
T 3t9g_A 51 EKGANLKNVIIGAPGCDGIHCY--GDNVVENVVWEDV----GEDALTVKSEGVVEVIGGSAKEAADKVFQLNAPCTFKVK 124 (196)
T ss_dssp CTTCEEEEEEECSCCTTCEEEC--SSEEEEEEEESSC----CSCSEEECSSEEEEEESCEEEEEEEEEEEECSSEEEEEE
T ss_pred cCCCEEEEEEECCCCcCcEEEc--CCEeEEEEEeeee----eceeeEEcCCCeEEEECCCccCCCceEEEECCCceEEEe
Confidence 4678999999977777888886 4688999999873 568899988888999999999877766555557788899
Q ss_pred eeEEecCceeEEeeecccCCcCCEEEEEEEeeEEeCCcceEEEEeecCCCCceEEceEEEEEEEecCcc
Q 043588 239 RVTCGPGHGISIGSLAKDLIEEGVQNVTVFKTVFTGTTNGFRIKSWARPSNGFVQGVSFIDAIMRNVQF 307 (397)
Q Consensus 239 n~~~~~~~gi~igs~~~~~~~~~v~nI~i~n~~~~~~~~gi~i~~~~~~~~g~i~ni~~~ni~~~~~~~ 307 (397)
|.+..+ .|--+-|.|. ...-+++.++|+++.+....+ +++.. .-..+++.|+++.++..
T Consensus 125 nF~~~~-~GKl~RSCGn---c~~~r~v~i~~v~~~n~k~~l-~rtdS-----~~~~~~~~n~~~~~~~~ 183 (196)
T 3t9g_A 125 NFTATN-IGKLVRQNGN---TTFKVVIYLEDVTLNNVKSCV-AKSDS-----PVSELWYHNLNVNNCKT 183 (196)
T ss_dssp EEEEEE-EEEEEEECTT---CCSCEEEEEEEEEEEEEEEEE-EECCC-----TTCEEEEEEEEEEEEEE
T ss_pred eEEEcc-CCEEEEcCCC---CCceeEEEEeCeEEeCCEEEE-EEcCC-----CCCEEEEecceecCCCc
Confidence 887753 4433444442 234489999999999864333 33321 12346777777776553
No 76
>1ee6_A Pectate lyase; parallel beta-helix, high-alkaline, low-molecular-weight; 2.30A {Bacillus SP} SCOP: b.80.1.1
Probab=96.20 E-value=0.16 Score=43.03 Aligned_cols=106 Identities=11% Similarity=0.024 Sum_probs=55.7
Q ss_pred CCeEEEeeEEecCcceEEEEeceecEEEEeEEEECCCCCCCCCceeeecceeEEEEecEEecCCceEEeCCCCeeEEEEe
Q 043588 160 NNIRINGLLSLNSQMFHIVINGCKDVHIEGVTVIAPGNSPNTDGIHVQLSTNVKITNCTIKTGDDCIPIGPGTKNLWIER 239 (397)
Q Consensus 160 ~nv~i~~v~i~~~~~~~i~~~~~~nv~i~n~~i~~~~~~~~~DGi~~~~s~nv~I~n~~i~~~dD~i~i~~~s~nv~i~n 239 (397)
+..+++++.|-.+...+||... +.+|+|+....- ..|.+.+.++..++|.+.-.++.+|-+--..+...+.|+|
T Consensus 48 ~GaTLkNvIIG~~~~dGIHC~G--~CtleNVwwedV----cEDA~T~k~~g~~~I~GGgA~~A~DKV~Q~Ng~Gtv~I~n 121 (197)
T 1ee6_A 48 AGASLKNVVIGAPAADGVHCYG--DCTITNVIWEDV----GEDALTLKSSGTVNISGGAAYKAYDKVFQINAAGTINIRN 121 (197)
T ss_dssp TTEEEEEEEECSSCTTCEEEES--CEEEEEEEESSC----CSCSEEEEESEEEEEESCEEEEEEEEEEEECSSEEEEEES
T ss_pred CCCEEEEEEEcCCCcccEEEcC--ceeEEEEEeeec----cccccEEcCCCeEEEECCCccCCCccEEEecCCceEEEee
Confidence 4667777776555556666653 366666666652 3456666655556666666665545443333445566666
Q ss_pred eEEecCceeEEeeecccCCcCCEEEEEEEeeEEeCC
Q 043588 240 VTCGPGHGISIGSLAKDLIEEGVQNVTVFKTVFTGT 275 (397)
Q Consensus 240 ~~~~~~~gi~igs~~~~~~~~~v~nI~i~n~~~~~~ 275 (397)
.+.. ..|=-+-|.|. ...-++|.++|+++.+.
T Consensus 122 F~~~-~~GKl~RScGn---c~~~r~v~i~~v~~~~~ 153 (197)
T 1ee6_A 122 FRAD-DIGKLVRQNGG---TTYKVVMNVENCNISRV 153 (197)
T ss_dssp CEEE-EEEEEEEECTT---CCSCEEEEEESCEEEEE
T ss_pred EEEc-cCCEEEEcCCC---CccceEEEEeceEEECc
Confidence 5443 12211222221 11225666666666654
No 77
>2nsp_A Pectinesterase A; michaelis complex, hydrolase; HET: M8C ADA; 1.70A {Erwinia chrysanthemi} PDB: 2nst_A* 2nt6_A* 2nt9_A* 2ntp_A* 2ntb_A* 2ntq_A* 1qjv_A
Probab=95.87 E-value=0.067 Score=50.38 Aligned_cols=112 Identities=5% Similarity=0.009 Sum_probs=77.3
Q ss_pred ceecEEEEeEEEECCCC--------------CCCCCceee---ecceeEEEEecEEecCCceEEeCCCCeeEEEEeeEEe
Q 043588 181 GCKDVHIEGVTVIAPGN--------------SPNTDGIHV---QLSTNVKITNCTIKTGDDCIPIGPGTKNLWIERVTCG 243 (397)
Q Consensus 181 ~~~nv~i~n~~i~~~~~--------------~~~~DGi~~---~~s~nv~I~n~~i~~~dD~i~i~~~s~nv~i~n~~~~ 243 (397)
.+++++++|++|.+..+ ......+.+ ..+.++.++||.|....|.+-... ....++||++.
T Consensus 94 ~a~~f~a~nlt~~Nt~~~~~~~~~~~~~~~~~~~~QAvAl~v~v~~d~~~f~~c~f~G~QDTLy~~~--gr~~~~~c~I~ 171 (342)
T 2nsp_A 94 SAKDFSAQSLTIRNDFDFPANQAKSDSDSSKIKDTQAVALYVTKSGDRAYFKDVSLVGYQATLYVSG--GRSFFSDCRIS 171 (342)
T ss_dssp CSBSCEEEEEEEEECCCHHHHHHSCTTCTTCCSCCCCCSEEECTTCBSEEEEEEEEECSTTCEEECS--SEEEEESCEEE
T ss_pred ECCCEEEEeeEEEccccccccccccccCCccccCCceEEEEEeeccCcEEEEeeEEecccceEEECC--CCEEEEcCEEE
Confidence 57899999999998651 112233344 247899999999999888887775 47999999999
Q ss_pred cCceeEEeeecccCCcCCEEEEEEEeeEEeCCcc---e-----EEEEeecCCCCceEEceEEEEEEEecC
Q 043588 244 PGHGISIGSLAKDLIEEGVQNVTVFKTVFTGTTN---G-----FRIKSWARPSNGFVQGVSFIDAIMRNV 305 (397)
Q Consensus 244 ~~~gi~igs~~~~~~~~~v~nI~i~n~~~~~~~~---g-----i~i~~~~~~~~g~i~ni~~~ni~~~~~ 305 (397)
+.-++-+|.. ...|+||++..... + -.|... ......-..+.|.|+++...
T Consensus 172 G~vDFIFG~a----------~a~f~~c~i~~~~~~~~~~~~~~g~ItA~-~~~~~~~~G~vf~~c~i~~~ 230 (342)
T 2nsp_A 172 GTVDFIFGDG----------TALFNNCDLVSRYRADVKSGNVSGYLTAP-STNINQKYGLVITNSRVIRE 230 (342)
T ss_dssp ESEEEEEESS----------EEEEESCEEEECCCTTSCTTSCCEEEEEE-CCBTTCSCCEEEESCEEEES
T ss_pred eceEEEeCCc----------eEEEecCEEEEecCcccccccCceEEEcc-CCCCCCCCEEEEEcCEEecC
Confidence 8878777653 47899999975321 0 234322 11112223478999999865
No 78
>1dbg_A Chondroitinase B; beta helix, polysaccharide lyase, dematan sulfate; HET: MAN RAM GCU MXY G4D BGC; 1.70A {Pedobacter heparinus} SCOP: b.80.1.4 PDB: 1dbo_A* 1ofl_A* 1ofm_A*
Probab=95.78 E-value=0.057 Score=53.57 Aligned_cols=142 Identities=7% Similarity=-0.009 Sum_probs=96.1
Q ss_pred ccCCeEEEeeEEecC-cceEEEEeceecEEEEeEEEECCCCCCCCCceeeecceeEEEEecEEecCC-----ceEEeCCC
Q 043588 158 NSNNIRINGLLSLNS-QMFHIVINGCKDVHIEGVTVIAPGNSPNTDGIHVQLSTNVKITNCTIKTGD-----DCIPIGPG 231 (397)
Q Consensus 158 ~~~nv~i~~v~i~~~-~~~~i~~~~~~nv~i~n~~i~~~~~~~~~DGi~~~~s~nv~I~n~~i~~~d-----D~i~i~~~ 231 (397)
...+.+|++-.+.+. ....+....+.+.+|++.++... ..|+.+..+.+.+|+++.|.... .||.+..
T Consensus 226 ~s~~~~VenN~f~~~~gg~aim~skS~~n~i~~N~~~~~-----~ggi~l~~~~~s~I~~N~f~gN~~~~~~~Gi~i~~- 299 (506)
T 1dbg_A 226 DIGRCLVDSNLFMRQDSEAEIITSKSQENVYYGNTYLNC-----QGTMNFRHGDHQVAINNFYIGNDQRFGYGGMFVWG- 299 (506)
T ss_dssp CBCCCEEESCEEEEECSSSEEEEEESBSCEEESCEEESC-----SSEEEEEECSSCEEESCEEEECSSSSCBCCEEECS-
T ss_pred ccCCcEEECCEEEeccCcEEEEEEecCCEEEECCEEEcc-----cCcEEEeecCccEEECCEEECCcCccCceEEEEEC-
Confidence 457888888777654 23455556666789999999973 34788888888899999998743 6787765
Q ss_pred CeeEEEEeeEEecCc--------eeEEeeecccCCcCCEEEEEEEeeEEeCCcc-eEEEE----------eecCCCCceE
Q 043588 232 TKNLWIERVTCGPGH--------GISIGSLAKDLIEEGVQNVTVFKTVFTGTTN-GFRIK----------SWARPSNGFV 292 (397)
Q Consensus 232 s~nv~i~n~~~~~~~--------gi~igs~~~~~~~~~v~nI~i~n~~~~~~~~-gi~i~----------~~~~~~~g~i 292 (397)
. +.+|+|++|.... |+.+...........+++++|++++|.+... ||.+. .........=
T Consensus 300 ~-~~~I~nN~f~~~~g~~~~~~~GI~i~~G~~~~~~~~~~~~~I~~Ntfi~n~~~gI~~~~~~~~~~~~~~g~~~~~~~p 378 (506)
T 1dbg_A 300 S-RHVIACNYFELSETIKSRGNAALYLNPGAMASEHALAFDMLIANNAFINVNGYAIHFNPLDERRKEYCAANRLKFETP 378 (506)
T ss_dssp B-SCEEESCEEEESSBCGGGTSEEEEECCBCTTSTTCCCBSEEEESCEEESCSSEEEESSTTHHHHHHHHHHTTCCCBCC
T ss_pred C-CCEEECCEEECCcCccccccccEEEecCCCccccccccCcEEECCEEECCccccEEEcccccccccccccccccccCC
Confidence 3 4499999997643 5555321100112347899999999999876 99887 1111011334
Q ss_pred EceEEEEEEEecCc
Q 043588 293 QGVSFIDAIMRNVQ 306 (397)
Q Consensus 293 ~ni~~~ni~~~~~~ 306 (397)
.|++|.|.-+.+..
T Consensus 379 ~~~~~~nN~i~~~~ 392 (506)
T 1dbg_A 379 HQLMLKGNLFFKDK 392 (506)
T ss_dssp CSEEEESCEEECCS
T ss_pred CcEEEEccEEEcCC
Confidence 57888888887655
No 79
>3uw0_A Pectinesterase; right-handed beta-helix, carbohydrate esterase, hydrolase; 3.50A {Yersinia enterocolitica subsp}
Probab=95.55 E-value=0.18 Score=47.75 Aligned_cols=114 Identities=9% Similarity=0.012 Sum_probs=79.7
Q ss_pred eceecEEEEeEEEECCCC----------------CCCCCceeee-cceeEEEEecEEecCCceEEeCCCCeeEEEEeeEE
Q 043588 180 NGCKDVHIEGVTVIAPGN----------------SPNTDGIHVQ-LSTNVKITNCTIKTGDDCIPIGPGTKNLWIERVTC 242 (397)
Q Consensus 180 ~~~~nv~i~n~~i~~~~~----------------~~~~DGi~~~-~s~nv~I~n~~i~~~dD~i~i~~~s~nv~i~n~~~ 242 (397)
..+++++++|++|+|... ...+-++.+. .+.+..++||.|....|.+-... .....+++|++
T Consensus 119 V~a~~f~a~nitf~Nt~~~~~~~~~~~~~p~~~~~~QAvAl~v~~~~D~~~f~~C~f~G~QDTLy~~~-~gr~yf~~c~I 197 (364)
T 3uw0_A 119 VNAPNFTAENLTIRNDFDFPANKKKADTDPTKLKDTQAVALLLAENSDKARFKAVKLEGYQDTLYSKT-GSRSYFSDCEI 197 (364)
T ss_dssp ECSTTCEEEEEEEEECCCHHHHHHSCTTCTTCCSCCCCCSEEECTTCEEEEEEEEEEECSBSCEEECT-TCEEEEESCEE
T ss_pred EECCCEEEEeeeeEcCCcccccccccccccccccCCccEEEEEecCCCeEEEEeeEEEecccceEeCC-CCCEEEEcCEE
Confidence 467899999999998642 1122344454 47899999999999888887763 46899999999
Q ss_pred ecCceeEEeeecccCCcCCEEEEEEEeeEEeCCc------ceEEEEeecCCCCceEEceEEEEEEEecC
Q 043588 243 GPGHGISIGSLAKDLIEEGVQNVTVFKTVFTGTT------NGFRIKSWARPSNGFVQGVSFIDAIMRNV 305 (397)
Q Consensus 243 ~~~~gi~igs~~~~~~~~~v~nI~i~n~~~~~~~------~gi~i~~~~~~~~g~i~ni~~~ni~~~~~ 305 (397)
.+.-++-+|.. ...|+||++.... .+-.|... ......-..+.|.|+++...
T Consensus 198 ~GtvDFIFG~a----------~a~f~~c~i~~~~~~~~~~~~g~ITA~-~~~~~~~~G~vf~~c~i~~~ 255 (364)
T 3uw0_A 198 SGHVDFIFGSG----------ITVFDNCNIVARDRSDIEPPYGYITAP-STLTTSPYGLIFINSRLTKE 255 (364)
T ss_dssp EESEEEEEESS----------EEEEESCEEEECCCSSCSSCCEEEEEE-CCCTTCSCCEEEESCEEEEC
T ss_pred EcCCCEECCcc----------eEEEEeeEEEEeccCcccCCccEEEeC-CcCCCCCcEEEEEeeEEecC
Confidence 98888878753 5789999997531 12234332 21222223478999999864
No 80
>3b4n_A Endo-pectate lyase; pectin, galacturonic acid, right-handed parallel beta helix fold; 1.45A {Erwinia chrysanthemi} PDB: 3b8y_A* 3b90_A
Probab=95.47 E-value=0.94 Score=41.68 Aligned_cols=16 Identities=19% Similarity=0.466 Sum_probs=12.0
Q ss_pred ceEEEceeeeCCCCcc
Q 043588 122 GVSIIGGALDAKGSSL 137 (397)
Q Consensus 122 ni~I~GG~idg~g~~~ 137 (397)
.-+|.|+++||.+..|
T Consensus 124 ~~~i~g~t~Dgg~k~~ 139 (344)
T 3b4n_A 124 GATFENRTVDCGGVTI 139 (344)
T ss_dssp TEEEESSEEECTTCEE
T ss_pred ceeEecceEcCCCcEE
Confidence 4567788889888765
No 81
>1ee6_A Pectate lyase; parallel beta-helix, high-alkaline, low-molecular-weight; 2.30A {Bacillus SP} SCOP: b.80.1.1
Probab=94.91 E-value=0.78 Score=38.86 Aligned_cols=109 Identities=15% Similarity=0.200 Sum_probs=69.3
Q ss_pred ecEEEEeEEEECCCCCCCCCceeeecceeEEEEecEEec-CCceEEeCCCCeeEEEEeeEEecCce--eEEeeecccCCc
Q 043588 183 KDVHIEGVTVIAPGNSPNTDGIHVQLSTNVKITNCTIKT-GDDCIPIGPGTKNLWIERVTCGPGHG--ISIGSLAKDLIE 259 (397)
Q Consensus 183 ~nv~i~n~~i~~~~~~~~~DGi~~~~s~nv~I~n~~i~~-~dD~i~i~~~s~nv~i~n~~~~~~~g--i~igs~~~~~~~ 259 (397)
...+++|+.|-. +..||||..+ +-+++|+.+.. +.|++.+++ +..++|.+.-...+.+ +..-
T Consensus 48 ~GaTLkNvIIG~----~~~dGIHC~G--~CtleNVwwedVcEDA~T~k~-~g~~~I~GGgA~~A~DKV~Q~N-------- 112 (197)
T 1ee6_A 48 AGASLKNVVIGA----PAADGVHCYG--DCTITNVIWEDVGEDALTLKS-SGTVNISGGAAYKAYDKVFQIN-------- 112 (197)
T ss_dssp TTEEEEEEEECS----SCTTCEEEES--CEEEEEEEESSCCSCSEEEEE-SEEEEEESCEEEEEEEEEEEEC--------
T ss_pred CCCEEEEEEEcC----CCcccEEEcC--ceeEEEEEeeeccccccEEcC-CCeEEEECCCccCCCccEEEec--------
Confidence 468899999975 4779999976 57899988887 899999996 5667777766555443 2221
Q ss_pred CCEEEEEEEeeEEeCCcceEEEEeecCCCCceEEceEEEEEEEecCcccEEE
Q 043588 260 EGVQNVTVFKTVFTGTTNGFRIKSWARPSNGFVQGVSFIDAIMRNVQFPIVI 311 (397)
Q Consensus 260 ~~v~nI~i~n~~~~~~~~gi~i~~~~~~~~g~i~ni~~~ni~~~~~~~~i~i 311 (397)
.--.+.|+|....+ .|=...+... - ..-++|.++|+++.+....+..
T Consensus 113 -g~Gtv~I~nF~~~~--~GKl~RScGn-c-~~~r~v~i~~v~~~~~k~~i~~ 159 (197)
T 1ee6_A 113 -AAGTINIRNFRADD--IGKLVRQNGG-T-TYKVVMNVENCNISRVKDAILR 159 (197)
T ss_dssp -SSEEEEEESCEEEE--EEEEEEECTT-C-CSCEEEEEESCEEEEEEEEEEE
T ss_pred -CCceEEEeeEEEcc--CCEEEEcCCC-C-ccceEEEEeceEEECceEEEEE
Confidence 11246666655543 3433333321 1 1226777777777766654443
No 82
>3grh_A YBHC, acyl-COA thioester hydrolase YBGC; beta-helix, periplasmic, lipoprotein, outer membrane, carbohydrate esterase family 8; 1.70A {Escherichia coli k-12}
Probab=86.57 E-value=14 Score=35.31 Aligned_cols=40 Identities=15% Similarity=0.251 Sum_probs=22.6
Q ss_pred EEEccCCeEEEeeEEecCcce--------EEE-EeceecEEEEeEEEEC
Q 043588 155 RFTNSNNIRINGLLSLNSQMF--------HIV-INGCKDVHIEGVTVIA 194 (397)
Q Consensus 155 ~~~~~~nv~i~~v~i~~~~~~--------~i~-~~~~~nv~i~n~~i~~ 194 (397)
.....+++..++|+|.|.... .+. ...++...+.+|+|..
T Consensus 196 ~~V~g~~F~a~niTf~Ntag~~~~~~~~QAVAL~v~gDr~~fy~C~f~G 244 (422)
T 3grh_A 196 FWSQNNGLQLQNLTIENTLGDSVDAGNHPAVALRTDGDQVQINNVNILG 244 (422)
T ss_dssp EEECCTTCEEEEEEEEETTGGGSCSSCCCCCSEEECCSSEEEEEEEEEC
T ss_pred EEEECCCEEEEeeEEEeCCCCCCCCCCCceEEEEecCCcEEEEeeEEEe
Confidence 344577888888888775321 111 1234555666666664
No 83
>3b4n_A Endo-pectate lyase; pectin, galacturonic acid, right-handed parallel beta helix fold; 1.45A {Erwinia chrysanthemi} PDB: 3b8y_A* 3b90_A
Probab=85.85 E-value=9.5 Score=35.10 Aligned_cols=53 Identities=19% Similarity=0.103 Sum_probs=35.6
Q ss_pred cEEEEeEEEECCCCCCCCCceeee-cceeEEEEecEEec-CCceEEeCCCCeeEEEEeeEEec
Q 043588 184 DVHIEGVTVIAPGNSPNTDGIHVQ-LSTNVKITNCTIKT-GDDCIPIGPGTKNLWIERVTCGP 244 (397)
Q Consensus 184 nv~i~n~~i~~~~~~~~~DGi~~~-~s~nv~I~n~~i~~-~dD~i~i~~~s~nv~i~n~~~~~ 244 (397)
..+++|+.|-. ...||||.. + +-+|+|+.+.. +.|++.+++ ..++|.+.-...
T Consensus 159 GatlkNvIiG~----~~~dGIHC~~G--~CtleNVwwedVcEDA~T~kg--~~~~I~GGgA~~ 213 (344)
T 3b4n_A 159 ATVKNLRISAS----GGADGIHCDSG--NCTIENVIWEDICEDAATNNG--KTMTIVGGIAHN 213 (344)
T ss_dssp CEEEEEEECTT----CCTTCEEEEES--EEEEEEEEESSCSSCSEEECS--SEEEEESCEEEE
T ss_pred CcEEEEEEecC----CCccceEEccC--CeeEEEEeehhcccccceecC--ceEEEECchhcc
Confidence 35677776644 467888887 4 57788888776 788888884 356666554443
No 84
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A*
Probab=84.71 E-value=0.4 Score=45.52 Aligned_cols=39 Identities=33% Similarity=0.384 Sum_probs=28.1
Q ss_pred ccCccCCCCcchHHHHHHHHHHhhccCCCcEEEEcCc-eEEeec
Q 043588 37 SFGAKGNGVTDSTQAFAKAWDAACTSTESATINVPKG-RYLLGS 79 (397)
Q Consensus 37 d~GA~~dg~tddt~aiq~Ai~~a~~~~~g~~v~ip~G-~Y~~~~ 79 (397)
.=||+|||++|||+|+.+||.++ +++.++=-.| ||.+.+
T Consensus 3 ~~~a~gdgvtddt~a~~~~l~~~----~~~~~IDG~G~T~kVs~ 42 (670)
T 3ju4_A 3 RGSAKGDGVTDDTAALTSALNDT----PVGQKINGNGKTYKVTS 42 (670)
T ss_dssp CCCCCCEEEEECHHHHHHHHHHS----CTTSCEECTTCEEECSS
T ss_pred CCcccCCCccCcHHHHHHHhccC----CCCeEEeCCCceEEeee
Confidence 34899999999999999999654 3344444445 676654
No 85
>3riq_A Tailspike protein; right handed beta-helix, endorhamnosidase, lipopolysaccharide, viral protein; 1.50A {Siphovirus 9na}
Probab=73.66 E-value=42 Score=31.76 Aligned_cols=16 Identities=38% Similarity=0.505 Sum_probs=9.3
Q ss_pred ceeEEEEccCCeEEEe
Q 043588 151 ATTLRFTNSNNIRING 166 (397)
Q Consensus 151 ~~~i~~~~~~nv~i~~ 166 (397)
...+.+..|.+|.+++
T Consensus 145 ~stL~I~~~~gv~v~~ 160 (543)
T 3riq_A 145 GATLRVNSANNIIFTH 160 (543)
T ss_dssp CEEEEEESCEEEEEES
T ss_pred eeEEEEeccCceEEec
Confidence 3456666666665553
No 86
>2vfm_A Bifunctional tail protein; P22 tailspike protein, salmonella bacteriophage P22, protein folding, protein stability; 1.50A {Enterobacteria phage P22} PDB: 2vfp_A 2vfo_A 2vfq_A 2vfn_A 1tsp_A 1qrb_A 1qq1_A 1qrc_A 1tyu_A* 1tyv_A 1tyw_A* 1tyx_A* 1qa2_A 1clw_A 1qa3_A 1qa1_A
Probab=71.82 E-value=41 Score=31.14 Aligned_cols=81 Identities=17% Similarity=0.196 Sum_probs=50.6
Q ss_pred eeEEEEecEEec-CCceEEeCCC-----------------------CeeEEEEeeEEecCceeEEeeecccCCcCCEEEE
Q 043588 210 TNVKITNCTIKT-GDDCIPIGPG-----------------------TKNLWIERVTCGPGHGISIGSLAKDLIEEGVQNV 265 (397)
Q Consensus 210 ~nv~I~n~~i~~-~dD~i~i~~~-----------------------s~nv~i~n~~~~~~~gi~igs~~~~~~~~~v~nI 265 (397)
-|...++..... -.|++.++++ -.|-+|.|..+.++-|+.+|..|+ ..+++||
T Consensus 270 YNLQFRdS~~l~pVWDGFDLGaD~~m~pE~dRPGD~P~sqYP~HqLP~NHliDnllv~gsLGVG~GMDG~---G~YVSNi 346 (559)
T 2vfm_A 270 YNLQFRDSVVIYPVWDGFDLGADTDMNPELDRPGDYPITQYPLHQLPLNHLIDNLLVRGALGVGFGMDGK---GMYVSNI 346 (559)
T ss_dssp BSCEEEEEEEESCSSCSEEECCSCSSSCCSCCTTSCCTTTSCTTCCCCCCEEEEEEEECCSSEEEEEEEE---SCEEEEE
T ss_pred cceEeecceEEeeccccccccCCCCCCCCCCCCCCcccccCchhhCcchhhhhhheeecccceeeeecCC---CceEeee
Confidence 456666665544 4677777763 247778888777777766665543 3568888
Q ss_pred EEEeeEEeCCcceEEEEeecCCCCceEEceEEEEEEEecCc
Q 043588 266 TVFKTVFTGTTNGFRIKSWARPSNGFVQGVSFIDAIMRNVQ 306 (397)
Q Consensus 266 ~i~n~~~~~~~~gi~i~~~~~~~~g~i~ni~~~ni~~~~~~ 306 (397)
++++|- ..|..+.++ +-+|.|+++.++.
T Consensus 347 tv~DCA----GsG~~~~t~---------~~~FtNi~vID~N 374 (559)
T 2vfm_A 347 TVEDCA----GSGAYLLTH---------ESVFTNIAIIDTN 374 (559)
T ss_dssp EEESCS----SEEEEEEEE---------SCEEEEEEEESCC
T ss_pred Eehhcc----CcceEEeec---------cceeeeeEEEecc
Confidence 887773 234444443 3467777776654
No 87
>2v5i_A Salmonella typhimurium DB7155 bacteriophage DET7 tailspike; O-antigen binding and hydrolysis, beta-helix, viral protein; 1.60A {Bacteriophage}
Probab=70.98 E-value=41 Score=31.17 Aligned_cols=81 Identities=16% Similarity=0.225 Sum_probs=51.9
Q ss_pred eeEEEEecEEec-CCceEEeCCC-----------------------CeeEEEEeeEEecCceeEEeeecccCCcCCEEEE
Q 043588 210 TNVKITNCTIKT-GDDCIPIGPG-----------------------TKNLWIERVTCGPGHGISIGSLAKDLIEEGVQNV 265 (397)
Q Consensus 210 ~nv~I~n~~i~~-~dD~i~i~~~-----------------------s~nv~i~n~~~~~~~gi~igs~~~~~~~~~v~nI 265 (397)
-|...++..... -.|++.++++ -.|-+|.|..+.++-|+.+|..|+ ..+++||
T Consensus 273 YNLQFRdS~~l~pVWDGFDLGaD~~m~pE~dRPGD~P~sqYP~HqLP~NHliDnllv~gsLGVG~GMDG~---G~YVSNi 349 (559)
T 2v5i_A 273 YNLQFRDSVALSPVWDGFDLGSDPGMAPEPDRPGDLPVSEYPFHQLPNNHLVDNILVMNSLGVGLGMDGS---GGYVSNV 349 (559)
T ss_dssp BSCEEEEEEEESCSSCSEECCSSCTTCCSSSCTTSCCTTTSCTTCCCCCCEEEEEEEESCSSEEEEEEEE---SCEEEEE
T ss_pred cceEeecceEEeeccccccccCCCCCCCCCCCCCCcccccCchhhCcchhhhhhheeecccceeeeecCC---CceEeee
Confidence 456666665544 4677777763 257788888877777777766543 3578888
Q ss_pred EEEeeEEeCCcceEEEEeecCCCCceEEceEEEEEEEecCc
Q 043588 266 TVFKTVFTGTTNGFRIKSWARPSNGFVQGVSFIDAIMRNVQ 306 (397)
Q Consensus 266 ~i~n~~~~~~~~gi~i~~~~~~~~g~i~ni~~~ni~~~~~~ 306 (397)
++++|- ..|..+.++ +-+|.|+++.++.
T Consensus 350 tv~DCA----GsG~~~~t~---------~~~FtNi~vID~N 377 (559)
T 2v5i_A 350 TVQDCA----GAGMLAHTY---------NRVFSNITVIDCN 377 (559)
T ss_dssp EEESCS----SEEEEEEEE---------SCEEEEEEEESCC
T ss_pred Eehhcc----CcceEEeec---------cceeeeeEEEecc
Confidence 888773 334444443 3467788777664
No 88
>2xc1_A Bifunctional tail protein; hydrolase, endoglycosidase, salmonella phage P22; HET: PE4; 1.65A {Enterobacteria phage P22} PDB: 1lkt_A
Probab=65.45 E-value=60 Score=31.39 Aligned_cols=81 Identities=17% Similarity=0.196 Sum_probs=51.7
Q ss_pred eeEEEEecEEec-CCceEEeCCC-----------------------CeeEEEEeeEEecCceeEEeeecccCCcCCEEEE
Q 043588 210 TNVKITNCTIKT-GDDCIPIGPG-----------------------TKNLWIERVTCGPGHGISIGSLAKDLIEEGVQNV 265 (397)
Q Consensus 210 ~nv~I~n~~i~~-~dD~i~i~~~-----------------------s~nv~i~n~~~~~~~gi~igs~~~~~~~~~v~nI 265 (397)
-|...++..... -.|++.++++ -.|-+|.|..+.++-|+.+|..|+ .++++||
T Consensus 377 ynlqfrds~~~~pvwdgfdlg~d~~m~pe~drpgd~p~~~yp~h~lp~nhlidn~~v~~slgvg~gmdg~---g~yvsni 453 (666)
T 2xc1_A 377 YNLQFRDSVVIYPVWDGFDLGADTDMNPELDRPGDYPITQYPLHQLPLNHLIDNLLVRGALGVGFGMDGK---GMYVSNI 453 (666)
T ss_dssp BSCEEEEEEEECCSSCSEEECCSCSSCTTCCCTTSCCTTTSCTTCCCCCCEEEEEEEESCSSEEEEEEEE---SCEEEEE
T ss_pred cceeeecceEEeeccccccccCCCCCCCCCCCCCCcccccCchhhCcchhhhhhheeecccceeeeecCC---CceEeee
Confidence 456666665544 4678887763 257778888877777776666543 3578888
Q ss_pred EEEeeEEeCCcceEEEEeecCCCCceEEceEEEEEEEecCc
Q 043588 266 TVFKTVFTGTTNGFRIKSWARPSNGFVQGVSFIDAIMRNVQ 306 (397)
Q Consensus 266 ~i~n~~~~~~~~gi~i~~~~~~~~g~i~ni~~~ni~~~~~~ 306 (397)
++++|- ..|..+.++ +-+|.|+++.++.
T Consensus 454 tv~dca----g~g~~~~~~---------~~~ftni~vid~n 481 (666)
T 2xc1_A 454 TVEDCA----GSGAYLLTH---------ESVFTNIAIIDTN 481 (666)
T ss_dssp EEESCS----SEEEEEEEE---------SCEEEEEEEESCC
T ss_pred Eehhcc----CcceEEeec---------cceeeeeEEEecc
Confidence 888773 234444443 3467777776654
No 89
>2vfm_A Bifunctional tail protein; P22 tailspike protein, salmonella bacteriophage P22, protein folding, protein stability; 1.50A {Enterobacteria phage P22} PDB: 2vfp_A 2vfo_A 2vfq_A 2vfn_A 1tsp_A 1qrb_A 1qq1_A 1qrc_A 1tyu_A* 1tyv_A 1tyw_A* 1tyx_A* 1qa2_A 1clw_A 1qa3_A 1qa1_A
Probab=57.96 E-value=31 Score=31.96 Aligned_cols=67 Identities=13% Similarity=0.093 Sum_probs=38.9
Q ss_pred CeeEEEEeeEEec-C-ceeEEeeec------ccC---------CcCCEEEEEEEeeEEeCCcceEEEEeecCCCCceEEc
Q 043588 232 TKNLWIERVTCGP-G-HGISIGSLA------KDL---------IEEGVQNVTVFKTVFTGTTNGFRIKSWARPSNGFVQG 294 (397)
Q Consensus 232 s~nv~i~n~~~~~-~-~gi~igs~~------~~~---------~~~~v~nI~i~n~~~~~~~~gi~i~~~~~~~~g~i~n 294 (397)
..|..+++...-. - +|+.+|+.. .+. ...--.|=.|.|+.+.++ -|+.+.-. + .+++|+|
T Consensus 269 nYNLQFRdS~~l~pVWDGFDLGaD~~m~pE~dRPGD~P~sqYP~HqLP~NHliDnllv~gs-LGVG~GMD-G-~G~YVSN 345 (559)
T 2vfm_A 269 NYNLQFRDSVVIYPVWDGFDLGADTDMNPELDRPGDYPITQYPLHQLPLNHLIDNLLVRGA-LGVGFGMD-G-KGMYVSN 345 (559)
T ss_dssp CBSCEEEEEEEESCSSCSEEECCSCSSSCCSCCTTSCCTTTSCTTCCCCCCEEEEEEEECC-SSEEEEEE-E-ESCEEEE
T ss_pred ccceEeecceEEeeccccccccCCCCCCCCCCCCCCcccccCchhhCcchhhhhhheeecc-cceeeeec-C-CCceEee
Confidence 4789999987543 3 467777651 110 001123556777777775 44444432 2 5678877
Q ss_pred eEEEEEE
Q 043588 295 VSFIDAI 301 (397)
Q Consensus 295 i~~~ni~ 301 (397)
|+++++.
T Consensus 346 itv~DCA 352 (559)
T 2vfm_A 346 ITVEDCA 352 (559)
T ss_dssp EEEESCS
T ss_pred eEehhcc
Confidence 7777663
No 90
>2v5i_A Salmonella typhimurium DB7155 bacteriophage DET7 tailspike; O-antigen binding and hydrolysis, beta-helix, viral protein; 1.60A {Bacteriophage}
Probab=56.64 E-value=29 Score=32.11 Aligned_cols=67 Identities=19% Similarity=0.172 Sum_probs=38.6
Q ss_pred CeeEEEEeeEEec-C-ceeEEeeec------ccC---------CcCCEEEEEEEeeEEeCCcceEEEEeecCCCCceEEc
Q 043588 232 TKNLWIERVTCGP-G-HGISIGSLA------KDL---------IEEGVQNVTVFKTVFTGTTNGFRIKSWARPSNGFVQG 294 (397)
Q Consensus 232 s~nv~i~n~~~~~-~-~gi~igs~~------~~~---------~~~~v~nI~i~n~~~~~~~~gi~i~~~~~~~~g~i~n 294 (397)
..|..+++...-. - +|+.+|+.. .+. ...--.|=.|.|+.+.++ -|+.+.-. + .+++|+|
T Consensus 272 nYNLQFRdS~~l~pVWDGFDLGaD~~m~pE~dRPGD~P~sqYP~HqLP~NHliDnllv~gs-LGVG~GMD-G-~G~YVSN 348 (559)
T 2v5i_A 272 NYNLQFRDSVALSPVWDGFDLGSDPGMAPEPDRPGDLPVSEYPFHQLPNNHLVDNILVMNS-LGVGLGMD-G-SGGYVSN 348 (559)
T ss_dssp CBSCEEEEEEEESCSSCSEECCSSCTTCCSSSCTTSCCTTTSCTTCCCCCCEEEEEEEESC-SSEEEEEE-E-ESCEEEE
T ss_pred ccceEeecceEEeeccccccccCCCCCCCCCCCCCCcccccCchhhCcchhhhhhheeecc-cceeeeec-C-CCceEee
Confidence 4789999987543 3 367776651 110 011123556778777775 44444432 2 5678877
Q ss_pred eEEEEEE
Q 043588 295 VSFIDAI 301 (397)
Q Consensus 295 i~~~ni~ 301 (397)
|+++++.
T Consensus 349 itv~DCA 355 (559)
T 2v5i_A 349 VTVQDCA 355 (559)
T ss_dssp EEEESCS
T ss_pred eEehhcc
Confidence 7777653
No 91
>2xc1_A Bifunctional tail protein; hydrolase, endoglycosidase, salmonella phage P22; HET: PE4; 1.65A {Enterobacteria phage P22} PDB: 1lkt_A
Probab=45.00 E-value=52 Score=31.78 Aligned_cols=67 Identities=13% Similarity=0.093 Sum_probs=39.0
Q ss_pred CeeEEEEeeEEec-C-ceeEEeeec------ccC---------CcCCEEEEEEEeeEEeCCcceEEEEeecCCCCceEEc
Q 043588 232 TKNLWIERVTCGP-G-HGISIGSLA------KDL---------IEEGVQNVTVFKTVFTGTTNGFRIKSWARPSNGFVQG 294 (397)
Q Consensus 232 s~nv~i~n~~~~~-~-~gi~igs~~------~~~---------~~~~v~nI~i~n~~~~~~~~gi~i~~~~~~~~g~i~n 294 (397)
..|..+++...-. - +|+.+|+.. .+. ...--.|=.|.|+.+.++ -|+.++-. + .+++|+|
T Consensus 376 nynlqfrds~~~~pvwdgfdlg~d~~m~pe~drpgd~p~~~yp~h~lp~nhlidn~~v~~s-lgvg~gmd-g-~g~yvsn 452 (666)
T 2xc1_A 376 NYNLQFRDSVVIYPVWDGFDLGADTDMNPELDRPGDYPITQYPLHQLPLNHLIDNLLVRGA-LGVGFGMD-G-KGMYVSN 452 (666)
T ss_dssp CBSCEEEEEEEECCSSCSEEECCSCSSCTTCCCTTSCCTTTSCTTCCCCCCEEEEEEEESC-SSEEEEEE-E-ESCEEEE
T ss_pred ccceeeecceEEeeccccccccCCCCCCCCCCCCCCcccccCchhhCcchhhhhhheeecc-cceeeeec-C-CCceEee
Confidence 4789999987543 3 468777651 110 001123556777777775 44444432 2 5678877
Q ss_pred eEEEEEE
Q 043588 295 VSFIDAI 301 (397)
Q Consensus 295 i~~~ni~ 301 (397)
|+++++.
T Consensus 453 itv~dca 459 (666)
T 2xc1_A 453 ITVEDCA 459 (666)
T ss_dssp EEEESCS
T ss_pred eEehhcc
Confidence 7777663
No 92
>2yuh_A Tubulin-specific chaperone C; microtubule, beta-tubulin folding, beta-roll, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=44.17 E-value=38 Score=28.23 Aligned_cols=12 Identities=0% Similarity=0.149 Sum_probs=7.5
Q ss_pred EEEEccCCeEEE
Q 043588 154 LRFTNSNNIRIN 165 (397)
Q Consensus 154 i~~~~~~nv~i~ 165 (397)
+.+.+|++++|.
T Consensus 71 v~i~~C~~~~i~ 82 (179)
T 2yuh_A 71 VFLEDCSDCVLA 82 (179)
T ss_dssp EEEESCBSCEEE
T ss_pred EEEEeCCceEEE
Confidence 666666666654
No 93
>2x3h_A K5 lyase, K5A lyase; bacteriophage, glycosaminoglycan; 1.60A {Enterobacteria phage k1-5}
Probab=43.14 E-value=1.9e+02 Score=26.20 Aligned_cols=22 Identities=27% Similarity=0.546 Sum_probs=10.7
Q ss_pred EEEEEEeeEEeCCc-ceEEEEee
Q 043588 263 QNVTVFKTVFTGTT-NGFRIKSW 284 (397)
Q Consensus 263 ~nI~i~n~~~~~~~-~gi~i~~~ 284 (397)
+++++.|+.|.++. .|+.+-.+
T Consensus 166 ~dvsv~~i~fsn~~g~gfsliay 188 (542)
T 2x3h_A 166 SDVTVSDVNFSNVKGTGFSLIAY 188 (542)
T ss_dssp EEEEEEEEEEEEECSBEEEEEEE
T ss_pred CcceEeeeeeeecCCCceeEEEc
Confidence 35555555555532 34544443
No 94
>2zzv_A ABC transporter, solute-binding protein; periplasmic substrate binding protein, calcium, lactate, trap transporter, transport protein; 1.40A {Thermus thermophilus} PDB: 2zzw_A 2zzx_A
Probab=28.70 E-value=45 Score=30.93 Aligned_cols=11 Identities=27% Similarity=0.374 Sum_probs=0.0
Q ss_pred CchhhhhHHHH
Q 043588 1 MERLFSSLFSS 11 (397)
Q Consensus 1 m~~~~~~~~~~ 11 (397)
|+|+|++.+..
T Consensus 1 ~~~~~~~~~~~ 11 (361)
T 2zzv_A 1 MKRVSRRAFLR 11 (361)
T ss_dssp -----------
T ss_pred CchhHHHHHHh
Confidence 78877776533
No 95
>3bh7_B Protein XRP2; protein-protein complex, GTPase activating protein and GTPase, retinitis pigmentosa, GTP-binding, lipoprotein, myristate; HET: GDP; 1.90A {Homo sapiens} PDB: 3bh6_B* 2bx6_A
Probab=28.22 E-value=1.4e+02 Score=27.80 Aligned_cols=9 Identities=11% Similarity=0.302 Sum_probs=3.7
Q ss_pred EEEEccCCe
Q 043588 154 LRFTNSNNI 162 (397)
Q Consensus 154 i~~~~~~nv 162 (397)
+++.+|+|.
T Consensus 83 l~I~~c~nC 91 (352)
T 3bh7_B 83 VTIDDCTNC 91 (352)
T ss_dssp EEEESCBSC
T ss_pred EEEecCCCC
Confidence 344444443
No 96
>2w7z_A EFSQNR, pentapeptide repeat family protein; glutaraldehyde, gyrase inhibitor, cyclic pentylation, chemic modification; HET: LP6; 1.60A {Enterococcus faecalis}
Probab=26.53 E-value=1.5e+02 Score=24.80 Aligned_cols=11 Identities=0% Similarity=-0.148 Sum_probs=4.3
Q ss_pred EEEEEEeeEEe
Q 043588 263 QNVTVFKTVFT 273 (397)
Q Consensus 263 ~nI~i~n~~~~ 273 (397)
+++.++++.+.
T Consensus 113 ~~~~f~~~~l~ 123 (214)
T 2w7z_A 113 XDCLFEDCXAD 123 (214)
T ss_dssp EEEEEESCBCT
T ss_pred eeeEEeCCCCC
Confidence 33344444333
No 97
>3riq_A Tailspike protein; right handed beta-helix, endorhamnosidase, lipopolysaccharide, viral protein; 1.50A {Siphovirus 9na}
Probab=26.20 E-value=4e+02 Score=25.23 Aligned_cols=13 Identities=15% Similarity=0.235 Sum_probs=6.4
Q ss_pred eecEEEEeEEEEC
Q 043588 182 CKDVHIEGVTVIA 194 (397)
Q Consensus 182 ~~nv~i~n~~i~~ 194 (397)
|-|+.+++.....
T Consensus 262 nYnLqF~d~~~i~ 274 (543)
T 3riq_A 262 NYRLVFDNITTIQ 274 (543)
T ss_dssp CBSCEEEEEEEES
T ss_pred eeeEEEeccceEE
Confidence 4445555554444
Done!