Query 043593
Match_columns 103
No_of_seqs 102 out of 2857
Neff 10.6
Searched_HMMs 46136
Date Fri Mar 29 06:29:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043593.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/043593hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG4412 26S proteasome regulat 99.8 1.5E-20 3.3E-25 109.0 5.9 89 5-97 66-158 (226)
2 KOG4412 26S proteasome regulat 99.8 5.9E-19 1.3E-23 102.5 6.1 91 2-97 97-191 (226)
3 PHA02791 ankyrin-like protein; 99.8 4.1E-18 9E-23 106.8 9.4 91 2-97 85-179 (284)
4 PHA02743 Viral ankyrin protein 99.7 2.5E-17 5.5E-22 96.3 8.1 92 4-100 50-150 (166)
5 PHA02741 hypothetical protein; 99.7 4.7E-17 1E-21 95.4 9.1 93 2-99 51-153 (169)
6 PHA02791 ankyrin-like protein; 99.7 1.4E-16 3.1E-21 100.0 9.1 84 7-97 26-113 (284)
7 PHA02875 ankyrin repeat protei 99.7 2.4E-16 5.3E-21 103.2 9.2 87 7-98 98-188 (413)
8 PHA02874 ankyrin repeat protei 99.7 3.4E-16 7.4E-21 103.2 9.4 91 3-98 116-210 (434)
9 KOG0510 Ankyrin repeat protein 99.7 1.4E-16 3E-21 108.7 7.4 92 4-100 266-363 (929)
10 KOG0512 Fetal globin-inducing 99.7 1.9E-16 4E-21 91.7 6.4 86 3-93 89-178 (228)
11 PHA02741 hypothetical protein; 99.7 7.6E-16 1.7E-20 90.3 9.2 88 5-97 15-117 (169)
12 KOG0509 Ankyrin repeat and DHH 99.7 2.6E-16 5.7E-21 104.8 7.9 94 2-100 102-201 (600)
13 PHA02878 ankyrin repeat protei 99.7 5.6E-16 1.2E-20 103.2 9.1 92 2-98 158-255 (477)
14 PHA02875 ankyrin repeat protei 99.7 9.8E-16 2.1E-20 100.3 9.3 92 2-98 126-222 (413)
15 PF13637 Ank_4: Ankyrin repeat 99.7 7.1E-16 1.5E-20 74.6 6.4 54 11-69 1-54 (54)
16 PHA02736 Viral ankyrin protein 99.7 2.7E-16 5.8E-21 90.9 5.7 90 6-100 50-148 (154)
17 PHA03095 ankyrin-like protein; 99.6 1.4E-15 3E-20 100.8 8.9 91 2-97 213-309 (471)
18 KOG4177 Ankyrin [Cell wall/mem 99.6 7.3E-16 1.6E-20 109.2 7.3 93 2-99 531-627 (1143)
19 PHA02884 ankyrin repeat protei 99.6 3.7E-15 8E-20 94.0 9.3 84 8-96 67-155 (300)
20 PHA02946 ankyin-like protein; 99.6 3.2E-15 6.9E-20 99.0 9.1 90 2-97 63-159 (446)
21 PHA02946 ankyin-like protein; 99.6 3.6E-15 7.7E-20 98.8 8.8 91 2-98 199-317 (446)
22 KOG0502 Integral membrane anky 99.6 5E-16 1.1E-20 92.9 4.3 92 2-98 151-246 (296)
23 PLN03192 Voltage-dependent pot 99.6 3.6E-15 7.8E-20 104.7 9.0 93 2-99 549-676 (823)
24 PF12796 Ank_2: Ankyrin repeat 99.6 1E-14 2.2E-19 77.0 8.2 75 15-98 1-79 (89)
25 PHA02730 ankyrin-like protein; 99.6 5.4E-15 1.2E-19 101.0 8.6 88 6-98 36-136 (672)
26 PHA03100 ankyrin repeat protei 99.6 5.6E-15 1.2E-19 98.3 8.4 93 2-99 97-197 (480)
27 KOG0509 Ankyrin repeat and DHH 99.6 3.4E-15 7.4E-20 99.6 6.8 90 3-97 70-164 (600)
28 PF13857 Ank_5: Ankyrin repeat 99.6 2E-15 4.3E-20 73.5 4.2 50 2-56 7-56 (56)
29 KOG0514 Ankyrin repeat protein 99.6 4.6E-15 1E-19 94.1 6.8 91 7-102 336-433 (452)
30 PHA03095 ankyrin-like protein; 99.6 1.1E-14 2.3E-19 96.7 8.9 91 2-97 38-138 (471)
31 PHA02878 ankyrin repeat protei 99.6 1.1E-14 2.3E-19 97.1 8.8 89 2-97 192-286 (477)
32 KOG0195 Integrin-linked kinase 99.6 6E-15 1.3E-19 91.7 7.0 91 4-99 27-121 (448)
33 PHA02874 ankyrin repeat protei 99.6 1.7E-14 3.6E-19 95.2 9.3 82 2-88 148-233 (434)
34 PHA02743 Viral ankyrin protein 99.6 2.2E-14 4.7E-19 84.0 7.8 92 2-98 11-114 (166)
35 PHA02884 ankyrin repeat protei 99.6 4.9E-14 1.1E-18 89.0 9.1 90 5-99 26-125 (300)
36 PHA03100 ankyrin repeat protei 99.6 3.2E-14 6.9E-19 94.7 8.6 91 2-97 132-236 (480)
37 KOG0508 Ankyrin repeat protein 99.5 8.2E-15 1.8E-19 95.7 4.9 92 3-99 109-204 (615)
38 KOG1710 MYND Zn-finger and ank 99.5 3.6E-14 7.7E-19 88.0 7.4 94 3-101 37-135 (396)
39 PHA02798 ankyrin-like protein; 99.5 4.1E-14 8.9E-19 94.6 8.3 92 2-98 62-168 (489)
40 KOG0510 Ankyrin repeat protein 99.5 2.5E-14 5.3E-19 98.0 7.0 95 2-100 297-399 (929)
41 PHA02859 ankyrin repeat protei 99.5 1E-13 2.2E-18 83.8 9.0 83 10-97 86-178 (209)
42 PHA02876 ankyrin repeat protei 99.5 7.6E-14 1.7E-18 96.5 9.1 92 2-98 366-463 (682)
43 PHA02716 CPXV016; CPX019; EVM0 99.5 7.2E-14 1.6E-18 96.9 8.7 91 2-97 203-338 (764)
44 PHA02859 ankyrin repeat protei 99.5 1.4E-13 3.1E-18 83.2 8.3 83 2-89 114-203 (209)
45 PHA02795 ankyrin-like protein; 99.5 8.8E-14 1.9E-18 91.3 7.8 85 9-98 186-282 (437)
46 KOG0508 Ankyrin repeat protein 99.5 2.4E-14 5.1E-19 93.6 4.8 91 2-97 141-234 (615)
47 KOG0514 Ankyrin repeat protein 99.5 2.1E-14 4.5E-19 91.2 4.3 89 5-97 262-392 (452)
48 PLN03192 Voltage-dependent pot 99.5 1.5E-13 3.3E-18 96.6 8.6 87 7-98 521-611 (823)
49 PF12796 Ank_2: Ankyrin repeat 99.5 1.3E-13 2.9E-18 72.7 6.4 61 11-76 26-86 (89)
50 KOG4214 Myotrophin and similar 99.5 1.7E-13 3.7E-18 72.0 5.9 64 10-78 33-96 (117)
51 PHA02876 ankyrin repeat protei 99.5 3.3E-13 7.3E-18 93.3 9.2 92 2-98 169-294 (682)
52 PHA02989 ankyrin repeat protei 99.5 3.6E-13 7.9E-18 90.2 8.9 54 44-97 251-308 (494)
53 PHA02798 ankyrin-like protein; 99.5 4.5E-13 9.7E-18 89.7 9.2 93 2-99 100-207 (489)
54 PHA02716 CPXV016; CPX019; EVM0 99.5 4.1E-13 8.9E-18 93.2 8.6 91 2-97 167-269 (764)
55 PHA02989 ankyrin repeat protei 99.5 6.8E-13 1.5E-17 88.9 8.7 92 2-98 99-205 (494)
56 cd00204 ANK ankyrin repeats; 99.4 2E-12 4.4E-17 71.1 9.2 88 7-99 3-94 (126)
57 PHA02917 ankyrin-like protein; 99.4 1E-12 2.2E-17 90.6 9.1 90 4-98 389-506 (661)
58 COG0666 Arp FOG: Ankyrin repea 99.4 1.5E-12 3.2E-17 78.1 7.7 94 2-99 97-201 (235)
59 PHA02917 ankyrin-like protein; 99.4 2.2E-12 4.7E-17 89.0 8.8 57 2-63 23-82 (661)
60 KOG0515 p53-interacting protei 99.4 9.4E-13 2E-17 87.2 6.1 90 3-97 575-671 (752)
61 KOG0502 Integral membrane anky 99.4 4.5E-13 9.8E-18 80.5 3.7 94 2-100 184-281 (296)
62 PHA02736 Viral ankyrin protein 99.4 4.1E-12 9E-17 73.4 6.9 68 2-74 82-151 (154)
63 PTZ00322 6-phosphofructo-2-kin 99.3 5.6E-12 1.2E-16 87.2 8.2 81 14-99 85-169 (664)
64 PHA02795 ankyrin-like protein; 99.3 4.9E-12 1.1E-16 83.2 6.8 69 2-75 212-288 (437)
65 PF13857 Ank_5: Ankyrin repeat 99.3 1.8E-12 4E-17 63.0 3.5 52 30-85 1-56 (56)
66 KOG0507 CASK-interacting adapt 99.3 1.3E-12 2.8E-17 89.2 3.4 88 5-97 43-134 (854)
67 KOG0195 Integrin-linked kinase 99.3 4.1E-12 8.8E-17 79.2 5.2 90 3-97 59-152 (448)
68 KOG0507 CASK-interacting adapt 99.3 1.7E-12 3.7E-17 88.6 3.8 89 4-97 75-167 (854)
69 cd00204 ANK ankyrin repeats; 99.3 7.9E-11 1.7E-15 64.7 9.1 88 5-97 34-125 (126)
70 KOG0512 Fetal globin-inducing 99.3 1.7E-11 3.7E-16 71.4 6.5 81 13-97 65-149 (228)
71 TIGR00870 trp transient-recept 99.3 1.9E-11 4E-16 85.5 7.4 77 8-89 125-219 (743)
72 KOG4177 Ankyrin [Cell wall/mem 99.3 1.6E-11 3.6E-16 87.7 6.8 87 9-100 505-595 (1143)
73 PF13637 Ank_4: Ankyrin repeat 99.2 2.8E-11 6E-16 58.3 5.0 49 49-97 1-53 (54)
74 PHA02730 ankyrin-like protein; 99.2 6.3E-11 1.4E-15 81.4 7.9 96 2-100 68-177 (672)
75 PTZ00322 6-phosphofructo-2-kin 99.2 4.8E-11 1E-15 82.6 6.8 65 2-71 106-170 (664)
76 COG0666 Arp FOG: Ankyrin repea 99.2 3.6E-10 7.8E-15 67.7 8.9 89 5-98 67-167 (235)
77 TIGR00870 trp transient-recept 99.2 4.8E-11 1E-15 83.5 5.8 84 9-97 173-276 (743)
78 PHA02792 ankyrin-like protein; 99.1 4.5E-10 9.8E-15 76.8 8.3 81 2-87 363-452 (631)
79 KOG4214 Myotrophin and similar 99.1 3.1E-10 6.7E-15 59.9 5.7 80 13-98 4-87 (117)
80 PF13606 Ank_3: Ankyrin repeat 99.1 1.6E-10 3.5E-15 49.1 3.4 26 10-35 1-26 (30)
81 PF00023 Ank: Ankyrin repeat H 99.1 2.9E-10 6.3E-15 49.3 3.9 32 10-46 1-32 (33)
82 KOG0515 p53-interacting protei 99.1 5.1E-10 1.1E-14 74.6 6.5 80 15-99 554-637 (752)
83 KOG0505 Myosin phosphatase, re 99.0 3E-10 6.4E-15 75.3 4.4 79 4-87 66-148 (527)
84 PHA02792 ankyrin-like protein; 99.0 6E-10 1.3E-14 76.2 5.8 98 2-99 96-238 (631)
85 KOG0506 Glutaminase (contains 99.0 5.3E-10 1.1E-14 73.6 4.3 91 4-99 499-594 (622)
86 KOG0505 Myosin phosphatase, re 99.0 8.2E-10 1.8E-14 73.2 4.9 79 4-87 191-273 (527)
87 KOG1710 MYND Zn-finger and ank 98.9 6.8E-09 1.5E-13 65.0 7.5 83 10-97 11-98 (396)
88 KOG3676 Ca2+-permeable cation 98.9 3E-09 6.6E-14 73.5 6.1 83 10-97 239-327 (782)
89 KOG0705 GTPase-activating prot 98.9 2.8E-09 6E-14 71.7 5.4 67 7-78 657-723 (749)
90 KOG0818 GTPase-activating prot 98.9 1.4E-08 3.1E-13 67.3 7.0 88 5-97 121-219 (669)
91 KOG3676 Ca2+-permeable cation 98.8 2.7E-08 5.9E-13 69.0 6.2 82 10-96 183-291 (782)
92 KOG0506 Glutaminase (contains 98.7 6.3E-09 1.4E-13 68.7 2.3 65 3-71 531-595 (622)
93 KOG0522 Ankyrin repeat protein 98.7 4.2E-08 9.2E-13 65.4 6.1 60 3-67 47-106 (560)
94 KOG0818 GTPase-activating prot 98.6 6.5E-08 1.4E-12 64.4 5.0 54 9-67 165-218 (669)
95 KOG0782 Predicted diacylglycer 98.6 1.1E-07 2.5E-12 64.4 5.9 90 6-98 894-987 (1004)
96 KOG4369 RTK signaling protein 98.6 2.3E-08 4.9E-13 72.1 2.7 89 4-97 783-876 (2131)
97 KOG0783 Uncharacterized conser 98.6 2.9E-08 6.3E-13 69.5 2.4 78 5-87 46-128 (1267)
98 KOG4369 RTK signaling protein 98.5 3.7E-08 8E-13 71.0 2.0 84 10-98 756-844 (2131)
99 PF13606 Ank_3: Ankyrin repeat 98.5 2.1E-07 4.6E-12 39.3 2.9 27 48-74 1-27 (30)
100 KOG0522 Ankyrin repeat protein 98.4 6.5E-07 1.4E-11 59.9 5.6 81 13-97 22-107 (560)
101 KOG2384 Major histocompatibili 98.4 7.8E-07 1.7E-11 52.8 5.0 65 3-71 4-68 (223)
102 PF00023 Ank: Ankyrin repeat H 98.2 1.9E-06 4.2E-11 37.0 3.1 29 48-76 1-29 (33)
103 KOG0521 Putative GTPase activa 98.2 1.9E-06 4.1E-11 61.0 4.3 85 9-98 654-742 (785)
104 KOG0511 Ankyrin repeat protein 98.1 9.4E-06 2E-10 52.9 5.2 58 13-75 38-95 (516)
105 KOG0705 GTPase-activating prot 98.1 1.6E-05 3.4E-10 54.2 6.1 83 14-97 627-713 (749)
106 KOG0783 Uncharacterized conser 97.7 6.8E-05 1.5E-09 53.4 3.9 47 8-59 83-129 (1267)
107 smart00248 ANK ankyrin repeats 97.6 0.00016 3.4E-09 28.8 3.4 26 10-35 1-26 (30)
108 KOG3609 Receptor-activated Ca2 97.4 0.00019 4.2E-09 50.8 3.8 83 4-98 55-151 (822)
109 KOG0520 Uncharacterized conser 97.4 6.5E-05 1.4E-09 54.1 1.3 57 41-97 633-699 (975)
110 KOG2384 Major histocompatibili 97.3 0.0005 1.1E-08 41.2 4.0 58 41-98 4-66 (223)
111 KOG0520 Uncharacterized conser 97.3 0.00024 5.2E-09 51.3 3.1 89 4-98 567-661 (975)
112 KOG2505 Ankyrin repeat protein 97.1 0.00039 8.4E-09 47.0 2.3 42 11-57 430-471 (591)
113 KOG0782 Predicted diacylglycer 96.8 0.0021 4.5E-08 44.5 4.0 61 5-70 928-988 (1004)
114 KOG0511 Ankyrin repeat protein 96.6 0.0046 9.9E-08 40.9 4.0 51 3-59 61-111 (516)
115 smart00248 ANK ankyrin repeats 96.4 0.0078 1.7E-07 23.4 3.0 23 49-71 2-24 (30)
116 KOG0521 Putative GTPase activa 96.1 0.0041 9E-08 44.7 2.0 61 2-67 680-740 (785)
117 KOG2505 Ankyrin repeat protein 95.9 0.015 3.2E-07 39.8 4.0 71 24-97 404-479 (591)
118 KOG3609 Receptor-activated Ca2 95.4 0.031 6.7E-07 40.3 4.1 85 11-99 25-109 (822)
119 PF06128 Shigella_OspC: Shigel 86.1 6.2 0.00013 24.9 6.1 88 12-101 180-277 (284)
120 PF11929 DUF3447: Domain of un 81.0 4.6 9.9E-05 20.4 3.6 47 13-71 8-54 (76)
121 PF03158 DUF249: Multigene fam 74.9 11 0.00024 22.9 4.4 20 16-35 148-167 (192)
122 PF03158 DUF249: Multigene fam 69.4 23 0.0005 21.6 4.9 73 13-94 48-120 (192)
123 PF06128 Shigella_OspC: Shigel 58.6 17 0.00037 23.1 3.1 27 9-35 252-278 (284)
124 PF12645 HTH_16: Helix-turn-he 35.3 61 0.0013 15.9 2.9 21 14-34 2-22 (65)
125 PF00906 Hepatitis_core: Hepat 24.1 65 0.0014 19.3 1.6 23 14-36 101-124 (187)
126 KOG3836 HLH transcription fact 21.8 34 0.00074 24.7 0.3 32 3-34 421-452 (605)
No 1
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=99.83 E-value=1.5e-20 Score=109.00 Aligned_cols=89 Identities=24% Similarity=0.287 Sum_probs=54.5
Q ss_pred ccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCcCchhhhcccccCCChHHHHHHHcCCHHHHhhhhhhhhcccc----CCc
Q 043593 5 AKITNSEDTALHIAVSDGRSDIVLKLVESMGQNASNVLKLQNEKGNTALHLAAALGNAAFVKIGCLDIQSLNI----KIK 80 (103)
Q Consensus 5 ~~~d~~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~~~~~----~~t 80 (103)
+..|..||||||.||..|+.++++.|+.+.+. +++..+..|.|+||+|+..|+.+++++|++.++..+. +.|
T Consensus 66 ddkDdaGWtPlhia~s~g~~evVk~Ll~r~~a----dvna~tn~G~T~LHyAagK~r~eIaqlLle~ga~i~~kD~~~qt 141 (226)
T KOG4412|consen 66 DDKDDAGWTPLHIAASNGNDEVVKELLNRSGA----DVNATTNGGQTCLHYAAGKGRLEIAQLLLEKGALIRIKDKQGQT 141 (226)
T ss_pred CCccccCCchhhhhhhcCcHHHHHHHhcCCCC----CcceecCCCcceehhhhcCChhhHHHHHHhcCCCCcccccccCc
Confidence 34466666666666666666666666666322 5666666666666666666666666666655544432 346
Q ss_pred HHHHHHhcCchhhhHhh
Q 043593 81 LLDIQSLNIKFKILDIQ 97 (103)
Q Consensus 81 pl~~A~~~~~~~~~~~~ 97 (103)
|||-|+.-|+.+++++|
T Consensus 142 plHRAAavGklkvie~L 158 (226)
T KOG4412|consen 142 PLHRAAAVGKLKVIEYL 158 (226)
T ss_pred hhHHHHhccchhhHHHH
Confidence 66666666666666665
No 2
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=99.78 E-value=5.9e-19 Score=102.46 Aligned_cols=91 Identities=23% Similarity=0.282 Sum_probs=82.1
Q ss_pred cccccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCcCchhhhcccccCCChHHHHHHHcCCHHHHhhhhhhhhcc----cc
Q 043593 2 IQAAKITNSEDTALHIAVSDGRSDIVLKLVESMGQNASNVLKLQNEKGNTALHLAAALGNAAFVKIGCLDIQSL----NI 77 (103)
Q Consensus 2 a~~~~~d~~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~~~----~~ 77 (103)
|++.+.+..|.|+||+|+..|+.++.++|++.|. .++.+|..|.||||-|+.-|..+++++|+..++.. .+
T Consensus 97 advna~tn~G~T~LHyAagK~r~eIaqlLle~ga-----~i~~kD~~~qtplHRAAavGklkvie~Li~~~a~~n~qDk~ 171 (226)
T KOG4412|consen 97 ADVNATTNGGQTCLHYAAGKGRLEIAQLLLEKGA-----LIRIKDKQGQTPLHRAAAVGKLKVIEYLISQGAPLNTQDKY 171 (226)
T ss_pred CCcceecCCCcceehhhhcCChhhHHHHHHhcCC-----CCcccccccCchhHHHHhccchhhHHHHHhcCCCCCccccc
Confidence 6788999999999999999999999999999997 79999999999999999999999999998766554 46
Q ss_pred CCcHHHHHHhcCchhhhHhh
Q 043593 78 KIKLLDIQSLNIKFKILDIQ 97 (103)
Q Consensus 78 ~~tpl~~A~~~~~~~~~~~~ 97 (103)
|+||||.|...|+.++.-+|
T Consensus 172 G~TpL~~al~e~~~d~a~lL 191 (226)
T KOG4412|consen 172 GFTPLHHALAEGHPDVAVLL 191 (226)
T ss_pred CccHHHHHHhccCchHHHHH
Confidence 68999999888888877666
No 3
>PHA02791 ankyrin-like protein; Provisional
Probab=99.77 E-value=4.1e-18 Score=106.85 Aligned_cols=91 Identities=21% Similarity=0.212 Sum_probs=70.0
Q ss_pred cccccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCcCchhhhcccccCCC-hHHHHHHHcCCHHHHhhhhhhhhcc---cc
Q 043593 2 IQAAKITNSEDTALHIAVSDGRSDIVLKLVESMGQNASNVLKLQNEKGN-TALHLAAALGNAAFVKIGCLDIQSL---NI 77 (103)
Q Consensus 2 a~~~~~d~~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~g~-tpl~~a~~~~~~~~~~~l~~~~~~~---~~ 77 (103)
|+.+..|..|+||||+|+..|+.+++++|++.+. +++.++..|+ ||||+|+..|+.+++++|+...... ..
T Consensus 85 advn~~d~~G~TpLh~Aa~~g~~eivk~Ll~~ga-----din~~~~~g~~TpL~~Aa~~g~~eivk~LL~~~~~~~d~~~ 159 (284)
T PHA02791 85 MDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNW-----RLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDLAI 159 (284)
T ss_pred CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCC-----CcCccCCCCCcHHHHHHHHcCCHHHHHHHHhcCCccccccc
Confidence 3456678888888888888888888888888887 6777777764 7888888888888888876543221 23
Q ss_pred CCcHHHHHHhcCchhhhHhh
Q 043593 78 KIKLLDIQSLNIKFKILDIQ 97 (103)
Q Consensus 78 ~~tpl~~A~~~~~~~~~~~~ 97 (103)
+.||||+|+..|+.+++++|
T Consensus 160 g~TpLh~Aa~~g~~eiv~lL 179 (284)
T PHA02791 160 LLSCIHITIKNGHVDMMILL 179 (284)
T ss_pred CccHHHHHHHcCCHHHHHHH
Confidence 57888888888888888877
No 4
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.73 E-value=2.5e-17 Score=96.34 Aligned_cols=92 Identities=18% Similarity=0.165 Sum_probs=76.8
Q ss_pred cccCCCCCCcHHHHHHHcCCHHH---HHHHHHhcCcCchhhhcccc-cCCChHHHHHHHcCCHHHHhhhhh-hhhcc---
Q 043593 4 AAKITNSEDTALHIAVSDGRSDI---VLKLVESMGQNASNVLKLQN-EKGNTALHLAAALGNAAFVKIGCL-DIQSL--- 75 (103)
Q Consensus 4 ~~~~d~~g~t~lh~a~~~~~~~~---~~~Ll~~~~~~~~~~~~~~~-~~g~tpl~~a~~~~~~~~~~~l~~-~~~~~--- 75 (103)
....|..|+||||+|+..|+.+. +++|++.|. +++.++ ..|.||||+|+..++.+++++++. .+...
T Consensus 50 ~~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Ga-----din~~d~~~g~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~ 124 (166)
T PHA02743 50 LHRYDHHGRQCTHMVAWYDRANAVMKIELLVNMGA-----DINARELGTGNTLLHIAASTKNYELAEWLCRQLGVNLGAI 124 (166)
T ss_pred hhccCCCCCcHHHHHHHhCccCHHHHHHHHHHcCC-----CCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhccCCCccCc
Confidence 34578999999999999988654 789999997 889888 589999999999999999998874 33332
Q ss_pred -ccCCcHHHHHHhcCchhhhHhhhhh
Q 043593 76 -NIKIKLLDIQSLNIKFKILDIQSLN 100 (103)
Q Consensus 76 -~~~~tpl~~A~~~~~~~~~~~~~~~ 100 (103)
..+.||||+|+..++.+++++|-.+
T Consensus 125 d~~g~tpL~~A~~~~~~~iv~~Ll~~ 150 (166)
T PHA02743 125 NYQHETAYHIAYKMRDRRMMEILRAN 150 (166)
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 4567999999999999999998543
No 5
>PHA02741 hypothetical protein; Provisional
Probab=99.73 E-value=4.7e-17 Score=95.40 Aligned_cols=93 Identities=20% Similarity=0.235 Sum_probs=79.2
Q ss_pred cccccCCCCCCcHHHHHHHcCC----HHHHHHHHHhcCcCchhhhccccc-CCChHHHHHHHcCCHHHHhhhhh-hhhcc
Q 043593 2 IQAAKITNSEDTALHIAVSDGR----SDIVLKLVESMGQNASNVLKLQNE-KGNTALHLAAALGNAAFVKIGCL-DIQSL 75 (103)
Q Consensus 2 a~~~~~d~~g~t~lh~a~~~~~----~~~~~~Ll~~~~~~~~~~~~~~~~-~g~tpl~~a~~~~~~~~~~~l~~-~~~~~ 75 (103)
+.....|..|.||||+|+..|+ .+++++|+..+. +++.++. .|.||||+|+..++.+++++|+. .+...
T Consensus 51 a~in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~ga-----din~~~~~~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~ 125 (169)
T PHA02741 51 AALNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIELGA-----DINAQEMLEGDTALHLAAHRRDHDLAEWLCCQPGIDL 125 (169)
T ss_pred hhhhccCCCCCcHHHHHHHcCChHHHHHHHHHHHHcCC-----CCCCCCcCCCCCHHHHHHHcCCHHHHHHHHhCCCCCC
Confidence 3456789999999999999999 588899999987 7888885 89999999999999999998775 33332
Q ss_pred ----ccCCcHHHHHHhcCchhhhHhhhh
Q 043593 76 ----NIKIKLLDIQSLNIKFKILDIQSL 99 (103)
Q Consensus 76 ----~~~~tpl~~A~~~~~~~~~~~~~~ 99 (103)
..+.|||++|...++.+++++|..
T Consensus 126 ~~~n~~g~tpL~~A~~~~~~~iv~~L~~ 153 (169)
T PHA02741 126 HFCNADNKSPFELAIDNEDVAMMQILRE 153 (169)
T ss_pred CcCCCCCCCHHHHHHHCCCHHHHHHHHH
Confidence 356799999999999999999854
No 6
>PHA02791 ankyrin-like protein; Provisional
Probab=99.70 E-value=1.4e-16 Score=99.98 Aligned_cols=84 Identities=19% Similarity=0.145 Sum_probs=38.4
Q ss_pred CCCCCCcHHHHHHHcCCHHHHHHHHHhcCcCchhhhcccccCCChHHHHHHHcCCHHHHhhhhhhhhc----cccCCcHH
Q 043593 7 ITNSEDTALHIAVSDGRSDIVLKLVESMGQNASNVLKLQNEKGNTALHLAAALGNAAFVKIGCLDIQS----LNIKIKLL 82 (103)
Q Consensus 7 ~d~~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~~----~~~~~tpl 82 (103)
.|.+|.||||+|+..|+.+++++|++.+. +++..+ +.||||+|+..|+.+++++|...++. ...|.|||
T Consensus 26 ~D~~G~TpLh~Aa~~g~~eiv~~Ll~~ga-----~~n~~d--~~TpLh~Aa~~g~~eiV~lLL~~Gadvn~~d~~G~TpL 98 (284)
T PHA02791 26 ADVHGHSALYYAIADNNVRLVCTLLNAGA-----LKNLLE--NEFPLHQAATLEDTKIVKILLFSGMDDSQFDDKGNTAL 98 (284)
T ss_pred CCCCCCcHHHHHHHcCCHHHHHHHHHCcC-----CCcCCC--CCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHH
Confidence 44455555555555555555555555543 333322 34455555555555554444332222 12233455
Q ss_pred HHHHhcCchhhhHhh
Q 043593 83 DIQSLNIKFKILDIQ 97 (103)
Q Consensus 83 ~~A~~~~~~~~~~~~ 97 (103)
|+|+..|+.+++++|
T Consensus 99 h~Aa~~g~~eivk~L 113 (284)
T PHA02791 99 YYAVDSGNMQTVKLF 113 (284)
T ss_pred HHHHHcCCHHHHHHH
Confidence 555544444444444
No 7
>PHA02875 ankyrin repeat protein; Provisional
Probab=99.69 E-value=2.4e-16 Score=103.16 Aligned_cols=87 Identities=20% Similarity=0.125 Sum_probs=65.2
Q ss_pred CCCCCCcHHHHHHHcCCHHHHHHHHHhcCcCchhhhcccccCCChHHHHHHHcCCHHHHhhhhhhhhcc----ccCCcHH
Q 043593 7 ITNSEDTALHIAVSDGRSDIVLKLVESMGQNASNVLKLQNEKGNTALHLAAALGNAAFVKIGCLDIQSL----NIKIKLL 82 (103)
Q Consensus 7 ~d~~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~~~----~~~~tpl 82 (103)
.+.+|.||||+|+..|+.+++++|++.|+ +++.++..|.||||+|+..|+.++++++...++.. ..|.|||
T Consensus 98 ~~~~g~tpL~~A~~~~~~~iv~~Ll~~ga-----d~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~TpL 172 (413)
T PHA02875 98 FYKDGMTPLHLATILKKLDIMKLLIARGA-----DPDIPNTDKFSPLHLAVMMGDIKGIELLIDHKACLDIEDCCGCTPL 172 (413)
T ss_pred ccCCCCCHHHHHHHhCCHHHHHHHHhCCC-----CCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHH
Confidence 45667888888888888888888888876 67777778888888888888888887776554432 3456888
Q ss_pred HHHHhcCchhhhHhhh
Q 043593 83 DIQSLNIKFKILDIQS 98 (103)
Q Consensus 83 ~~A~~~~~~~~~~~~~ 98 (103)
|+|+..|+.+++++|-
T Consensus 173 ~~A~~~g~~eiv~~Ll 188 (413)
T PHA02875 173 IIAMAKGDIAICKMLL 188 (413)
T ss_pred HHHHHcCCHHHHHHHH
Confidence 8888888888777763
No 8
>PHA02874 ankyrin repeat protein; Provisional
Probab=99.68 E-value=3.4e-16 Score=103.17 Aligned_cols=91 Identities=14% Similarity=0.096 Sum_probs=77.7
Q ss_pred ccccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCcCchhhhcccccCCChHHHHHHHcCCHHHHhhhhhhhhcc----ccC
Q 043593 3 QAAKITNSEDTALHIAVSDGRSDIVLKLVESMGQNASNVLKLQNEKGNTALHLAAALGNAAFVKIGCLDIQSL----NIK 78 (103)
Q Consensus 3 ~~~~~d~~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~~~----~~~ 78 (103)
+....|..|.||||+|+..|+.+++++|++.|. +++.+|..|.||||+|+..++.+++++|...++.. ..+
T Consensus 116 d~n~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~ga-----d~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g~~~n~~~~~g 190 (434)
T PHA02874 116 DVNIKDAELKTFLHYAIKKGDLESIKMLFEYGA-----DVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYANVKDNNG 190 (434)
T ss_pred CCCCCCCCCccHHHHHHHCCCHHHHHHHHhCCC-----CCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCC
Confidence 455678899999999999999999999999987 78889999999999999999999999887655433 455
Q ss_pred CcHHHHHHhcCchhhhHhhh
Q 043593 79 IKLLDIQSLNIKFKILDIQS 98 (103)
Q Consensus 79 ~tpl~~A~~~~~~~~~~~~~ 98 (103)
.||||+|+..|+.+++++|-
T Consensus 191 ~tpL~~A~~~g~~~iv~~Ll 210 (434)
T PHA02874 191 ESPLHNAAEYGDYACIKLLI 210 (434)
T ss_pred CCHHHHHHHcCCHHHHHHHH
Confidence 79999999999999998874
No 9
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.68 E-value=1.4e-16 Score=108.72 Aligned_cols=92 Identities=18% Similarity=0.139 Sum_probs=79.5
Q ss_pred cccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCcCchhhhcccccCCChHHHHHHHcCCHHHHhhhhh-hh-----hcccc
Q 043593 4 AAKITNSEDTALHIAVSDGRSDIVLKLVESMGQNASNVLKLQNEKGNTALHLAAALGNAAFVKIGCL-DI-----QSLNI 77 (103)
Q Consensus 4 ~~~~d~~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~-~~-----~~~~~ 77 (103)
+...|.+|.||||+||+.|+.+.+..|+..|. +++.++..+.+|||.|+..|+.++++.|+. .+ ..+--
T Consensus 266 v~~~d~dg~tpLH~a~r~G~~~svd~Ll~~Ga-----~I~~kn~d~~spLH~AA~yg~~ntv~rLL~~~~~rllne~D~~ 340 (929)
T KOG0510|consen 266 VNDEDNDGCTPLHYAARQGGPESVDNLLGFGA-----SINSKNKDEESPLHFAAIYGRINTVERLLQESDTRLLNESDLH 340 (929)
T ss_pred hhcccccCCchHHHHHHcCChhHHHHHHHcCC-----cccccCCCCCCchHHHHHcccHHHHHHHHhCcCcccccccccc
Confidence 34579999999999999999999999999998 899999999999999999999999988766 22 22233
Q ss_pred CCcHHHHHHhcCchhhhHhhhhh
Q 043593 78 KIKLLDIQSLNIKFKILDIQSLN 100 (103)
Q Consensus 78 ~~tpl~~A~~~~~~~~~~~~~~~ 100 (103)
+.||||+|+..||.+++++|-.+
T Consensus 341 g~tpLHlaa~~gH~~v~qlLl~~ 363 (929)
T KOG0510|consen 341 GMTPLHLAAKSGHDRVVQLLLNK 363 (929)
T ss_pred CCCchhhhhhcCHHHHHHHHHhc
Confidence 46999999999999999998554
No 10
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.67 E-value=1.9e-16 Score=91.72 Aligned_cols=86 Identities=23% Similarity=0.145 Sum_probs=75.1
Q ss_pred ccccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCcCchhhhcccccCCChHHHHHHHcCCHHHHhhhhhhhhccc----cC
Q 043593 3 QAAKITNSEDTALHIAVSDGRSDIVLKLVESMGQNASNVLKLQNEKGNTALHLAAALGNAAFVKIGCLDIQSLN----IK 78 (103)
Q Consensus 3 ~~~~~d~~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~~~~----~~ 78 (103)
+++.+|.+|.||||.|+..||.+++..|+..|+ +++.+...|+||||.||.-++.+|+..|+..++..+ -.
T Consensus 89 ~vNtrD~D~YTpLHRAaYn~h~div~~ll~~gA-----n~~a~T~~GWTPLhSAckWnN~~va~~LLqhgaDVnA~t~g~ 163 (228)
T KOG0512|consen 89 HVNTRDEDEYTPLHRAAYNGHLDIVHELLLSGA-----NKEAKTNEGWTPLHSACKWNNFEVAGRLLQHGADVNAQTKGL 163 (228)
T ss_pred cccccccccccHHHHHHhcCchHHHHHHHHccC-----CcccccccCccchhhhhcccchhHHHHHHhccCccccccccc
Confidence 367899999999999999999999999999998 899999999999999999999999998877665543 23
Q ss_pred CcHHHHHHhcCchhh
Q 043593 79 IKLLDIQSLNIKFKI 93 (103)
Q Consensus 79 ~tpl~~A~~~~~~~~ 93 (103)
.||||+|+...+..+
T Consensus 164 ltpLhlaa~~rn~r~ 178 (228)
T KOG0512|consen 164 LTPLHLAAGNRNSRD 178 (228)
T ss_pred chhhHHhhcccchHH
Confidence 599999998776443
No 11
>PHA02741 hypothetical protein; Provisional
Probab=99.67 E-value=7.6e-16 Score=90.29 Aligned_cols=88 Identities=15% Similarity=0.137 Sum_probs=72.9
Q ss_pred ccCCCCCCcHHHHHHHcCCHHHHHHHHHh------cCcCchhhhcccccCCChHHHHHHHcCCH----HHHhhhhhhhhc
Q 043593 5 AKITNSEDTALHIAVSDGRSDIVLKLVES------MGQNASNVLKLQNEKGNTALHLAAALGNA----AFVKIGCLDIQS 74 (103)
Q Consensus 5 ~~~d~~g~t~lh~a~~~~~~~~~~~Ll~~------~~~~~~~~~~~~~~~g~tpl~~a~~~~~~----~~~~~l~~~~~~ 74 (103)
...|..|.||||+|+..|+.++++.|+.. +. +++.+|..|.||||+|+..|+. ++++++...++.
T Consensus 15 ~~~~~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga-----~in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~gad 89 (169)
T PHA02741 15 AEKNSEGENFFHEAARCGCFDIIARFTPFIRGDCHAA-----ALNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIELGAD 89 (169)
T ss_pred hccccCCCCHHHHHHHcCCHHHHHHHHHHhccchhhh-----hhhccCCCCCcHHHHHHHcCChHHHHHHHHHHHHcCCC
Confidence 35688999999999999999999988653 33 7888999999999999999984 677777654433
Q ss_pred c-----ccCCcHHHHHHhcCchhhhHhh
Q 043593 75 L-----NIKIKLLDIQSLNIKFKILDIQ 97 (103)
Q Consensus 75 ~-----~~~~tpl~~A~~~~~~~~~~~~ 97 (103)
. ..+.||||+|+..++.+++++|
T Consensus 90 in~~~~~~g~TpLh~A~~~~~~~iv~~L 117 (169)
T PHA02741 90 INAQEMLEGDTALHLAAHRRDHDLAEWL 117 (169)
T ss_pred CCCCCcCCCCCHHHHHHHcCCHHHHHHH
Confidence 2 2567999999999999999987
No 12
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=99.67 E-value=2.6e-16 Score=104.82 Aligned_cols=94 Identities=22% Similarity=0.150 Sum_probs=61.6
Q ss_pred cccccCC-CCCCcHHHHHHHcCCHHHHHHHHHhcCcCchhhhcccccCCChHHHHHHHcCCHHHHhhhhhhh----hccc
Q 043593 2 IQAAKIT-NSEDTALHIAVSDGRSDIVLKLVESMGQNASNVLKLQNEKGNTALHLAAALGNAAFVKIGCLDI----QSLN 76 (103)
Q Consensus 2 a~~~~~d-~~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~----~~~~ 76 (103)
|+++..+ .-+.||||+|+++|+..++.+|+++|+ +++..|..|.+|+|+|++.++.-.+-+++... ..++
T Consensus 102 advn~~gG~l~stPLHWAar~G~~~vv~lLlqhGA-----dpt~~D~~G~~~lHla~~~~~~~~vayll~~~~d~d~~D~ 176 (600)
T KOG0509|consen 102 ADVNAIGGVLGSTPLHWAARNGHISVVDLLLQHGA-----DPTLKDKQGLTPLHLAAQFGHTALVAYLLSKGADIDLRDN 176 (600)
T ss_pred CCccccCCCCCCCcchHHHHcCcHHHHHHHHHcCC-----CCceecCCCCcHHHHHHHhCchHHHHHHHHhcccCCCcCC
Confidence 4444455 556777777777777777777777776 67777777777777777777777766654332 3334
Q ss_pred cCCcHHHHHHhcCchh-hhHhhhhh
Q 043593 77 IKIKLLDIQSLNIKFK-ILDIQSLN 100 (103)
Q Consensus 77 ~~~tpl~~A~~~~~~~-~~~~~~~~ 100 (103)
.|+|||++|+..|+.. +..++..+
T Consensus 177 ~grTpLmwAaykg~~~~v~~LL~f~ 201 (600)
T KOG0509|consen 177 NGRTPLMWAAYKGFALFVRRLLKFG 201 (600)
T ss_pred CCCCHHHHHHHhcccHHHHHHHHhc
Confidence 5567777777777766 44444443
No 13
>PHA02878 ankyrin repeat protein; Provisional
Probab=99.67 E-value=5.6e-16 Score=103.20 Aligned_cols=92 Identities=20% Similarity=0.146 Sum_probs=75.1
Q ss_pred cccccCCCC-CCcHHHHHHHcCCHHHHHHHHHhcCcCchhhhcccccCCChHHHHHHHcCCHHHHhhhhhhhhcc----c
Q 043593 2 IQAAKITNS-EDTALHIAVSDGRSDIVLKLVESMGQNASNVLKLQNEKGNTALHLAAALGNAAFVKIGCLDIQSL----N 76 (103)
Q Consensus 2 a~~~~~d~~-g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~~~----~ 76 (103)
|+....|.. |.||||+|+..|+.+++++|++.|. +++.+|..|.||||+|+..++.+++++|...++.. .
T Consensus 158 adin~~~~~~g~tpLh~A~~~~~~~iv~~Ll~~ga-----d~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~ga~in~~d~ 232 (477)
T PHA02878 158 ADINMKDRHKGNTALHYATENKDQRLTELLLSYGA-----NVNIPDKTNNSPLHHAVKHYNKPIVHILLENGASTDARDK 232 (477)
T ss_pred CCCCccCCCCCCCHHHHHHhCCCHHHHHHHHHCCC-----CCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCCCCC
Confidence 345566777 9999999999999999999999987 78888999999999999999999999887655444 3
Q ss_pred cCCcHHHHHHhc-CchhhhHhhh
Q 043593 77 IKIKLLDIQSLN-IKFKILDIQS 98 (103)
Q Consensus 77 ~~~tpl~~A~~~-~~~~~~~~~~ 98 (103)
.|.||||+|+.. ++.+++++|-
T Consensus 233 ~g~TpLh~A~~~~~~~~iv~~Ll 255 (477)
T PHA02878 233 CGNTPLHISVGYCKDYDILKLLL 255 (477)
T ss_pred CCCCHHHHHHHhcCCHHHHHHHH
Confidence 457999999864 6788888773
No 14
>PHA02875 ankyrin repeat protein; Provisional
Probab=99.66 E-value=9.8e-16 Score=100.33 Aligned_cols=92 Identities=21% Similarity=0.183 Sum_probs=81.5
Q ss_pred cccccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCcCchhhhcccccCCChHHHHHHHcCCHHHHhhhhhhhhcccc----
Q 043593 2 IQAAKITNSEDTALHIAVSDGRSDIVLKLVESMGQNASNVLKLQNEKGNTALHLAAALGNAAFVKIGCLDIQSLNI---- 77 (103)
Q Consensus 2 a~~~~~d~~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~~~~~---- 77 (103)
|+....+..|.||||+|+..|+.+++++|++.+. +++.+|..|.||||+|+..|+.+++++|+..++..+.
T Consensus 126 ad~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~g~-----~~~~~d~~g~TpL~~A~~~g~~eiv~~Ll~~ga~~n~~~~~ 200 (413)
T PHA02875 126 ADPDIPNTDKFSPLHLAVMMGDIKGIELLIDHKA-----CLDIEDCCGCTPLIIAMAKGDIAICKMLLDSGANIDYFGKN 200 (413)
T ss_pred CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCC-----CCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCcCCCC
Confidence 4566788999999999999999999999999998 7899999999999999999999999998877665532
Q ss_pred C-CcHHHHHHhcCchhhhHhhh
Q 043593 78 K-IKLLDIQSLNIKFKILDIQS 98 (103)
Q Consensus 78 ~-~tpl~~A~~~~~~~~~~~~~ 98 (103)
+ .||+++|+..++.+++++|-
T Consensus 201 ~~~t~l~~A~~~~~~~iv~~Ll 222 (413)
T PHA02875 201 GCVAALCYAIENNKIDIVRLFI 222 (413)
T ss_pred CCchHHHHHHHcCCHHHHHHHH
Confidence 2 48999999999999999884
No 15
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.66 E-value=7.1e-16 Score=74.57 Aligned_cols=54 Identities=39% Similarity=0.441 Sum_probs=45.0
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHhcCcCchhhhcccccCCChHHHHHHHcCCHHHHhhhh
Q 043593 11 EDTALHIAVSDGRSDIVLKLVESMGQNASNVLKLQNEKGNTALHLAAALGNAAFVKIGC 69 (103)
Q Consensus 11 g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~ 69 (103)
|+||||+|+..|+.+++++|++.+. +++.+|..|.||||+|+..|+.+++++|+
T Consensus 1 g~t~lh~A~~~g~~~~~~~Ll~~~~-----din~~d~~g~t~lh~A~~~g~~~~~~~Ll 54 (54)
T PF13637_consen 1 GRTPLHWAARSGNLEIVKLLLEHGA-----DINAQDEDGRTPLHYAAKNGNIDIVKFLL 54 (54)
T ss_dssp SSBHHHHHHHTT-HHHHHHHHHTTS-----GTT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred CChHHHHHHHhCCHHHHHHHHHCCC-----CCCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence 7899999999999999999999987 89999999999999999999999998763
No 16
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.66 E-value=2.7e-16 Score=90.85 Aligned_cols=90 Identities=17% Similarity=0.121 Sum_probs=73.4
Q ss_pred cCCCCCCcHHHHHHHcCCHH---HHHHHHHhcCcCchhhhcccc-cCCChHHHHHHHcCCHHHHhhhhhh-hhc----cc
Q 043593 6 KITNSEDTALHIAVSDGRSD---IVLKLVESMGQNASNVLKLQN-EKGNTALHLAAALGNAAFVKIGCLD-IQS----LN 76 (103)
Q Consensus 6 ~~d~~g~t~lh~a~~~~~~~---~~~~Ll~~~~~~~~~~~~~~~-~~g~tpl~~a~~~~~~~~~~~l~~~-~~~----~~ 76 (103)
..|.+|.||||+|+..++.+ ++++|++.|. +++.++ ..|.||||+|+..++.+++++++.. +.. ..
T Consensus 50 ~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~ga-----din~~~~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n~~~~ 124 (154)
T PHA02736 50 EYNRHGKQCVHIVSNPDKADPQEKLKLLMEWGA-----DINGKERVFGNTPLHIAVYTQNYELATWLCNQPGVNMEILNY 124 (154)
T ss_pred HhcCCCCEEEEeecccCchhHHHHHHHHHHcCC-----CccccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCccccC
Confidence 35778888888888888763 5788999997 788888 5899999999999999999988752 333 24
Q ss_pred cCCcHHHHHHhcCchhhhHhhhhh
Q 043593 77 IKIKLLDIQSLNIKFKILDIQSLN 100 (103)
Q Consensus 77 ~~~tpl~~A~~~~~~~~~~~~~~~ 100 (103)
.+.|||++|+..|+.+++++|-.+
T Consensus 125 ~g~tpL~~A~~~~~~~i~~~Ll~~ 148 (154)
T PHA02736 125 AFKTPYYVACERHDAKMMNILRAK 148 (154)
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHc
Confidence 567999999999999999988543
No 17
>PHA03095 ankyrin-like protein; Provisional
Probab=99.64 E-value=1.4e-15 Score=100.84 Aligned_cols=91 Identities=19% Similarity=0.120 Sum_probs=78.2
Q ss_pred cccccCCCCCCcHHHHHHHcCCH--HHHHHHHHhcCcCchhhhcccccCCChHHHHHHHcCCHHHHhhhhhhhhcc----
Q 043593 2 IQAAKITNSEDTALHIAVSDGRS--DIVLKLVESMGQNASNVLKLQNEKGNTALHLAAALGNAAFVKIGCLDIQSL---- 75 (103)
Q Consensus 2 a~~~~~d~~g~t~lh~a~~~~~~--~~~~~Ll~~~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~~~---- 75 (103)
++....|..|.||||+|+..++. .+++.|+..+. +++.+|..|.||||+|+..|+.+++++|+..++..
T Consensus 213 ~~~~~~d~~g~tpLh~Aa~~~~~~~~~v~~ll~~g~-----din~~d~~g~TpLh~A~~~~~~~~v~~LL~~gad~n~~~ 287 (471)
T PHA03095 213 CDPAATDMLGNTPLHSMATGSSCKRSLVLPLLIAGI-----SINARNRYGQTPLHYAAVFNNPRACRRLIALGADINAVS 287 (471)
T ss_pred CCCcccCCCCCCHHHHHHhcCCchHHHHHHHHHcCC-----CCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccC
Confidence 45667899999999999998875 57788888887 89999999999999999999999999987665554
Q ss_pred ccCCcHHHHHHhcCchhhhHhh
Q 043593 76 NIKIKLLDIQSLNIKFKILDIQ 97 (103)
Q Consensus 76 ~~~~tpl~~A~~~~~~~~~~~~ 97 (103)
..|.|||++|+..|+.++++++
T Consensus 288 ~~g~tpl~~A~~~~~~~~v~~L 309 (471)
T PHA03095 288 SDGNTPLSLMVRNNNGRAVRAA 309 (471)
T ss_pred CCCCCHHHHHHHhCCHHHHHHH
Confidence 4567999999999999999877
No 18
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=99.64 E-value=7.3e-16 Score=109.16 Aligned_cols=93 Identities=24% Similarity=0.213 Sum_probs=83.9
Q ss_pred cccccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCcCchhhhcccccCCChHHHHHHHcCCHHHHhhhhhhhhccc----c
Q 043593 2 IQAAKITNSEDTALHIAVSDGRSDIVLKLVESMGQNASNVLKLQNEKGNTALHLAAALGNAAFVKIGCLDIQSLN----I 77 (103)
Q Consensus 2 a~~~~~d~~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~~~~----~ 77 (103)
|.....+.+|.||||.||..|+..++++|+++|. +++.++..|+||||.|+..|+.+|+++|+..++..+ .
T Consensus 531 a~v~~~~~r~~TpLh~A~~~g~v~~VkfLLe~gA-----dv~ak~~~G~TPLH~Aa~~G~~~i~~LLlk~GA~vna~d~~ 605 (1143)
T KOG4177|consen 531 ANVDLRTGRGYTPLHVAVHYGNVDLVKFLLEHGA-----DVNAKDKLGYTPLHQAAQQGHNDIAELLLKHGASVNAADLD 605 (1143)
T ss_pred CceehhcccccchHHHHHhcCCchHHHHhhhCCc-----cccccCCCCCChhhHHHHcChHHHHHHHHHcCCCCCccccc
Confidence 3456788899999999999999999999999998 899999999999999999999999999988776664 4
Q ss_pred CCcHHHHHHhcCchhhhHhhhh
Q 043593 78 KIKLLDIQSLNIKFKILDIQSL 99 (103)
Q Consensus 78 ~~tpl~~A~~~~~~~~~~~~~~ 99 (103)
+.|||++|.+.|+.++++.+..
T Consensus 606 g~TpL~iA~~lg~~~~~k~l~~ 627 (1143)
T KOG4177|consen 606 GFTPLHIAVRLGYLSVVKLLKV 627 (1143)
T ss_pred CcchhHHHHHhcccchhhHHHh
Confidence 4699999999999999988754
No 19
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.63 E-value=3.7e-15 Score=94.03 Aligned_cols=84 Identities=14% Similarity=0.051 Sum_probs=63.3
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHhcCcCchhhhccc-ccCCChHHHHHHHcCCHHHHhhhhhhhhcc----ccCCcHH
Q 043593 8 TNSEDTALHIAVSDGRSDIVLKLVESMGQNASNVLKLQ-NEKGNTALHLAAALGNAAFVKIGCLDIQSL----NIKIKLL 82 (103)
Q Consensus 8 d~~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~-~~~g~tpl~~a~~~~~~~~~~~l~~~~~~~----~~~~tpl 82 (103)
|..|.||||+|+..++.+++++|+++|+ +++.+ +..|.||||+|+..++.+++++++..++.. ..|.|||
T Consensus 67 d~~g~TpLh~Aa~~~~~eivklLL~~GA-----DVN~~~~~~g~TpLh~Aa~~~~~eivklLL~~GAdin~kd~~G~TpL 141 (300)
T PHA02884 67 ENSKTNPLIYAIDCDNDDAAKLLIRYGA-----DVNRYAEEAKITPLYISVLHGCLKCLEILLSYGADINIQTNDMVTPI 141 (300)
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCC-----CcCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHH
Confidence 4578888888888888888888888887 77775 457888888888888888888877665544 3456888
Q ss_pred HHHHhcCchhhhHh
Q 043593 83 DIQSLNIKFKILDI 96 (103)
Q Consensus 83 ~~A~~~~~~~~~~~ 96 (103)
++|+..++.++..+
T Consensus 142 ~~A~~~~~~~~~~~ 155 (300)
T PHA02884 142 ELALMICNNFLAFM 155 (300)
T ss_pred HHHHHhCChhHHHH
Confidence 88887666555433
No 20
>PHA02946 ankyin-like protein; Provisional
Probab=99.63 E-value=3.2e-15 Score=99.03 Aligned_cols=90 Identities=11% Similarity=0.034 Sum_probs=72.5
Q ss_pred cccccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCcCchhhhcccccCCChHHHHHHHcCC--HHHHhhhhhhhhcc----
Q 043593 2 IQAAKITNSEDTALHIAVSDGRSDIVLKLVESMGQNASNVLKLQNEKGNTALHLAAALGN--AAFVKIGCLDIQSL---- 75 (103)
Q Consensus 2 a~~~~~d~~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~g~tpl~~a~~~~~--~~~~~~l~~~~~~~---- 75 (103)
++.+..|.+|.||||+|+..|+.+++++|+++|+ +++.+|..|.||||+|+..++ .+++++|...++..
T Consensus 63 advn~~d~~G~TpLh~Aa~~g~~eiv~lLL~~GA-----din~~d~~g~TpLh~A~~~~~~~~e~v~lLl~~Gadin~~~ 137 (446)
T PHA02946 63 YSPNETDDDGNYPLHIASKINNNRIVAMLLTHGA-----DPNACDKQHKTPLYYLSGTDDEVIERINLLVQYGAKINNSV 137 (446)
T ss_pred CCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCcC-----CCCCCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCccccc
Confidence 4567889999999999999999999999999997 899999999999999987654 77888877655443
Q ss_pred -ccCCcHHHHHHhcCchhhhHhh
Q 043593 76 -NIKIKLLDIQSLNIKFKILDIQ 97 (103)
Q Consensus 76 -~~~~tpl~~A~~~~~~~~~~~~ 97 (103)
..+.|||+ |+..++.++++++
T Consensus 138 d~~g~tpL~-aa~~~~~~vv~~L 159 (446)
T PHA02946 138 DEEGCGPLL-ACTDPSERVFKKI 159 (446)
T ss_pred CCCCCcHHH-HHHCCChHHHHHH
Confidence 34468886 5556777777666
No 21
>PHA02946 ankyin-like protein; Provisional
Probab=99.62 E-value=3.6e-15 Score=98.79 Aligned_cols=91 Identities=16% Similarity=0.118 Sum_probs=61.9
Q ss_pred cccccCCCCCCcHHHHHHHcC--CHHHHHHHHHhcCcCchhhhcccccCCChHHHHHHHcCCH-HHHhhhhhhhh-----
Q 043593 2 IQAAKITNSEDTALHIAVSDG--RSDIVLKLVESMGQNASNVLKLQNEKGNTALHLAAALGNA-AFVKIGCLDIQ----- 73 (103)
Q Consensus 2 a~~~~~d~~g~t~lh~a~~~~--~~~~~~~Ll~~~~~~~~~~~~~~~~~g~tpl~~a~~~~~~-~~~~~l~~~~~----- 73 (103)
|+....|.+|.||||+|+..+ +.+++++|+. +. +++.+|..|.||||+|+..++. ++++++...+.
T Consensus 199 adin~~d~~G~TpLH~Aa~~~~~~~~iv~lLl~-ga-----din~~d~~G~TpLh~A~~~~~~~~~~~~Ll~~g~~~~~~ 272 (446)
T PHA02946 199 ISPSKPDHDGNTPLHIVCSKTVKNVDIINLLLP-ST-----DVNKQNKFGDSPLTLLIKTLSPAHLINKLLSTSNVITDQ 272 (446)
T ss_pred CCCcccCCCCCCHHHHHHHcCCCcHHHHHHHHc-CC-----CCCCCCCCCCCHHHHHHHhCChHHHHHHHHhCCCCCCCc
Confidence 345567788888888888765 6677777774 54 6778888888888888877763 55555433211
Q ss_pred -------------------c-cccCCcHHHHHHhcCchhhhHhhh
Q 043593 74 -------------------S-LNIKIKLLDIQSLNIKFKILDIQS 98 (103)
Q Consensus 74 -------------------~-~~~~~tpl~~A~~~~~~~~~~~~~ 98 (103)
. ...+.||||+|+..|+.+++++|-
T Consensus 273 ~~~~a~~~~~~~~~e~l~~~g~~~~~TpLh~Aa~~g~~eivk~Ll 317 (446)
T PHA02946 273 TVNICIFYDRDDVLEIINDKGKQYDSTDFKMAVEVGSIRCVKYLL 317 (446)
T ss_pred HHHHHHHcCchHHHHHHHHcCcccCCCHHHHHHHcCCHHHHHHHH
Confidence 0 123458888888888888887773
No 22
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=99.62 E-value=5e-16 Score=92.94 Aligned_cols=92 Identities=16% Similarity=-0.012 Sum_probs=74.4
Q ss_pred cccccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCcCchhhhcccccCCChHHHHHHHcCCHHHHhhhhhhhhcc----cc
Q 043593 2 IQAAKITNSEDTALHIAVSDGRSDIVLKLVESMGQNASNVLKLQNEKGNTALHLAAALGNAAFVKIGCLDIQSL----NI 77 (103)
Q Consensus 2 a~~~~~d~~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~~~----~~ 77 (103)
+.++..|+.|.|||.+|+.+|++++++||++.|+ +++...++..++|.+|+++|..+++++|+...... ..
T Consensus 151 n~VN~~De~GfTpLiWAaa~G~i~vV~fLL~~GA-----dp~~lgk~resALsLAt~ggytdiV~lLL~r~vdVNvyDwN 225 (296)
T KOG0502|consen 151 NKVNACDEFGFTPLIWAAAKGHIPVVQFLLNSGA-----DPDALGKYRESALSLATRGGYTDIVELLLTREVDVNVYDWN 225 (296)
T ss_pred ccccCccccCchHhHHHHhcCchHHHHHHHHcCC-----ChhhhhhhhhhhHhHHhcCChHHHHHHHHhcCCCcceeccC
Confidence 4578899999999999999999999999999998 77777778888888888888888888876543332 33
Q ss_pred CCcHHHHHHhcCchhhhHhhh
Q 043593 78 KIKLLDIQSLNIKFKILDIQS 98 (103)
Q Consensus 78 ~~tpl~~A~~~~~~~~~~~~~ 98 (103)
|.|||-+|+..+|.+|++.|-
T Consensus 226 GgTpLlyAvrgnhvkcve~Ll 246 (296)
T KOG0502|consen 226 GGTPLLYAVRGNHVKCVESLL 246 (296)
T ss_pred CCceeeeeecCChHHHHHHHH
Confidence 458888888888888877664
No 23
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.62 E-value=3.6e-15 Score=104.73 Aligned_cols=93 Identities=20% Similarity=0.213 Sum_probs=74.0
Q ss_pred cccccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCcCchhhhcccccCCChHHHHHHHcCCHHHHhhhhh-----------
Q 043593 2 IQAAKITNSEDTALHIAVSDGRSDIVLKLVESMGQNASNVLKLQNEKGNTALHLAAALGNAAFVKIGCL----------- 70 (103)
Q Consensus 2 a~~~~~d~~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~----------- 70 (103)
++.+..|..|.||||+|+..|+.+++++|+++|+ +++.+|..|.||||+|+..|+.+++++|..
T Consensus 549 ~d~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~ga-----din~~d~~G~TpL~~A~~~g~~~iv~~L~~~~~~~~~~~~~ 623 (823)
T PLN03192 549 LDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHAC-----NVHIRDANGNTALWNAISAKHHKIFRILYHFASISDPHAAG 623 (823)
T ss_pred CCCCCCCCCCCCHHHHHHHcChHHHHHHHHhcCC-----CCCCcCCCCCCHHHHHHHhCCHHHHHHHHhcCcccCcccCc
Confidence 4567889999999999999999999999999998 899999999999998888887777665422
Q ss_pred --------------------hhh----ccccCCcHHHHHHhcCchhhhHhhhh
Q 043593 71 --------------------DIQ----SLNIKIKLLDIQSLNIKFKILDIQSL 99 (103)
Q Consensus 71 --------------------~~~----~~~~~~tpl~~A~~~~~~~~~~~~~~ 99 (103)
.++ ....|.||||+|+..|+.+++++|-.
T Consensus 624 ~~L~~Aa~~g~~~~v~~Ll~~Gadin~~d~~G~TpLh~A~~~g~~~iv~~Ll~ 676 (823)
T PLN03192 624 DLLCTAAKRNDLTAMKELLKQGLNVDSEDHQGATALQVAMAEDHVDMVRLLIM 676 (823)
T ss_pred hHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHHHHHHHHH
Confidence 211 22344688888888888888887743
No 24
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.61 E-value=1e-14 Score=77.02 Aligned_cols=75 Identities=33% Similarity=0.371 Sum_probs=64.5
Q ss_pred HHHHHHcCCHHHHHHHHHhcCcCchhhhcccccCCChHHHHHHHcCCHHHHhhhhhhhhccc----cCCcHHHHHHhcCc
Q 043593 15 LHIAVSDGRSDIVLKLVESMGQNASNVLKLQNEKGNTALHLAAALGNAAFVKIGCLDIQSLN----IKIKLLDIQSLNIK 90 (103)
Q Consensus 15 lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~~~~----~~~tpl~~A~~~~~ 90 (103)
||+|+..|+.+++++|++.+. +++. |.+|||+|+..|+.++++++...+...+ .+.||||+|+..|+
T Consensus 1 L~~A~~~~~~~~~~~ll~~~~-----~~~~----~~~~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 71 (89)
T PF12796_consen 1 LHIAAQNGNLEILKFLLEKGA-----DINL----GNTALHYAAENGNLEIVKLLLENGADINSQDKNGNTALHYAAENGN 71 (89)
T ss_dssp HHHHHHTTTHHHHHHHHHTTS-----TTTS----SSBHHHHHHHTTTHHHHHHHHHTTTCTT-BSTTSSBHHHHHHHTTH
T ss_pred CHHHHHcCCHHHHHHHHHCcC-----CCCC----CCCHHHHHHHcCCHHHHHHHHHhcccccccCCCCCCHHHHHHHcCC
Confidence 799999999999999999776 4554 8899999999999999999887655543 45799999999999
Q ss_pred hhhhHhhh
Q 043593 91 FKILDIQS 98 (103)
Q Consensus 91 ~~~~~~~~ 98 (103)
.+++++|-
T Consensus 72 ~~~~~~Ll 79 (89)
T PF12796_consen 72 LEIVKLLL 79 (89)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999884
No 25
>PHA02730 ankyrin-like protein; Provisional
Probab=99.60 E-value=5.4e-15 Score=100.97 Aligned_cols=88 Identities=23% Similarity=0.145 Sum_probs=77.0
Q ss_pred cCCCCCCcHHHHHHHcC---CHHHHHHHHHhcCcCchhhhcccccCCChHHHHHHHcC--CHHHHhhhhhhhh------c
Q 043593 6 KITNSEDTALHIAVSDG---RSDIVLKLVESMGQNASNVLKLQNEKGNTALHLAAALG--NAAFVKIGCLDIQ------S 74 (103)
Q Consensus 6 ~~d~~g~t~lh~a~~~~---~~~~~~~Ll~~~~~~~~~~~~~~~~~g~tpl~~a~~~~--~~~~~~~l~~~~~------~ 74 (103)
..|.+|+||||+|+..+ +.+++++|+++|+ +++.+|..|.||||+|+..+ +.+++++|...++ .
T Consensus 36 ~kd~~G~TaLh~A~~~~~~~~~eivklLLs~GA-----din~kD~~G~TPLh~Aa~~~~~~~eIv~~Ll~~~~~~~~~~~ 110 (672)
T PHA02730 36 HIDRRGNNALHCYVSNKCDTDIKIVRLLLSRGV-----ERLCRNNEGLTPLGVYSKRKYVKSQIVHLLISSYSNASNELT 110 (672)
T ss_pred hcCCCCCcHHHHHHHcCCcCcHHHHHHHHhCCC-----CCcccCCCCCChHHHHHHcCCCcHHHHHHHHhcCCCCCcccc
Confidence 77899999999999987 5899999999998 89999999999999999866 7999999887643 3
Q ss_pred cccCCcHHHHHHh--cCchhhhHhhh
Q 043593 75 LNIKIKLLDIQSL--NIKFKILDIQS 98 (103)
Q Consensus 75 ~~~~~tpl~~A~~--~~~~~~~~~~~ 98 (103)
.+.+.+|++.++. +++.+++++|-
T Consensus 111 ~~~~d~~l~~y~~s~n~~~~~vk~Li 136 (672)
T PHA02730 111 SNINDFDLYSYMSSDNIDLRLLKYLI 136 (672)
T ss_pred cccCCchHHHHHHhcCCcHHHHHHHH
Confidence 4557799999887 99999998885
No 26
>PHA03100 ankyrin repeat protein; Provisional
Probab=99.60 E-value=5.6e-15 Score=98.25 Aligned_cols=93 Identities=16% Similarity=0.130 Sum_probs=77.9
Q ss_pred cccccCCCCCCcHHHHHH--HcCCHHHHHHHHHhcCcCchhhhcccccCCChHHHHHHHcC--CHHHHhhhhhhhhcc--
Q 043593 2 IQAAKITNSEDTALHIAV--SDGRSDIVLKLVESMGQNASNVLKLQNEKGNTALHLAAALG--NAAFVKIGCLDIQSL-- 75 (103)
Q Consensus 2 a~~~~~d~~g~t~lh~a~--~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~g~tpl~~a~~~~--~~~~~~~l~~~~~~~-- 75 (103)
|+....|..|.||||+|+ ..|+.+++++|++.|. +++..+..|.||||+|+..+ +.++++++...++..
T Consensus 97 a~i~~~d~~g~tpL~~A~~~~~~~~~iv~~Ll~~g~-----~~~~~~~~g~t~L~~A~~~~~~~~~iv~~Ll~~g~din~ 171 (480)
T PHA03100 97 ANVNAPDNNGITPLLYAISKKSNSYSIVEYLLDNGA-----NVNIKNSDGENLLHLYLESNKIDLKILKLLIDKGVDINA 171 (480)
T ss_pred CCCCCCCCCCCchhhHHHhcccChHHHHHHHHHcCC-----CCCccCCCCCcHHHHHHHcCCChHHHHHHHHHCCCCccc
Confidence 345677888999999999 8999999999999987 78888999999999999999 899999887655433
Q ss_pred --ccCCcHHHHHHhcCchhhhHhhhh
Q 043593 76 --NIKIKLLDIQSLNIKFKILDIQSL 99 (103)
Q Consensus 76 --~~~~tpl~~A~~~~~~~~~~~~~~ 99 (103)
..+.||||+|+..|+.+++++|-.
T Consensus 172 ~d~~g~tpL~~A~~~~~~~iv~~Ll~ 197 (480)
T PHA03100 172 KNRYGYTPLHIAVEKGNIDVIKFLLD 197 (480)
T ss_pred ccCCCCCHHHHHHHhCCHHHHHHHHH
Confidence 355799999999999999988743
No 27
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=99.60 E-value=3.4e-15 Score=99.61 Aligned_cols=90 Identities=18% Similarity=0.114 Sum_probs=78.7
Q ss_pred ccccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCcCchhhhcccc-cCCChHHHHHHHcCCHHHHhhhhhhhhccc----c
Q 043593 3 QAAKITNSEDTALHIAVSDGRSDIVLKLVESMGQNASNVLKLQN-EKGNTALHLAAALGNAAFVKIGCLDIQSLN----I 77 (103)
Q Consensus 3 ~~~~~d~~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~-~~g~tpl~~a~~~~~~~~~~~l~~~~~~~~----~ 77 (103)
.+...|.+|.|+||+||.+++.+++++|+++|+ ++|..+ .-+.||||+|++.|+..++.+|...++... +
T Consensus 70 ~v~~~D~~g~tlLHWAAiNNrl~v~r~li~~ga-----dvn~~gG~l~stPLHWAar~G~~~vv~lLlqhGAdpt~~D~~ 144 (600)
T KOG0509|consen 70 SVNNPDREGVTLLHWAAINNRLDVARYLISHGA-----DVNAIGGVLGSTPLHWAARNGHISVVDLLLQHGADPTLKDKQ 144 (600)
T ss_pred CCCCCCcCCccceeHHHHcCcHHHHHHHHHcCC-----CccccCCCCCCCcchHHHHcCcHHHHHHHHHcCCCCceecCC
Confidence 467789999999999999999999999999998 899887 778999999999999999999887776653 4
Q ss_pred CCcHHHHHHhcCchhhhHhh
Q 043593 78 KIKLLDIQSLNIKFKILDIQ 97 (103)
Q Consensus 78 ~~tpl~~A~~~~~~~~~~~~ 97 (103)
|-+|+|+|+..++.-.+.-+
T Consensus 145 G~~~lHla~~~~~~~~vayl 164 (600)
T KOG0509|consen 145 GLTPLHLAAQFGHTALVAYL 164 (600)
T ss_pred CCcHHHHHHHhCchHHHHHH
Confidence 45999999999997666544
No 28
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.59 E-value=2e-15 Score=73.50 Aligned_cols=50 Identities=26% Similarity=0.337 Sum_probs=32.1
Q ss_pred cccccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCcCchhhhcccccCCChHHHHH
Q 043593 2 IQAAKITNSEDTALHIAVSDGRSDIVLKLVESMGQNASNVLKLQNEKGNTALHLA 56 (103)
Q Consensus 2 a~~~~~d~~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~g~tpl~~a 56 (103)
+.....|..|.||||+||..|+.+++++|++.+. +++.+|..|.||+++|
T Consensus 7 ~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~-----d~~~~d~~G~Tpl~~A 56 (56)
T PF13857_consen 7 ADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGA-----DPNAKDKDGQTPLHYA 56 (56)
T ss_dssp --TT---TTS--HHHHHHHHT-HHHHHHHHHCT-------TT---TTS--HHHH-
T ss_pred CCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcC-----CCCCCcCCCCCHHHhC
Confidence 4577899999999999999999999999998887 8999999999999986
No 29
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.59 E-value=4.6e-15 Score=94.12 Aligned_cols=91 Identities=30% Similarity=0.252 Sum_probs=78.9
Q ss_pred CCCCCCcHHHHHHHcCCHHHHHHHHHhcCcCchhhhcccccCCChHHHHHHHcCCHHHHhhhh-----hhhhccccCCcH
Q 043593 7 ITNSEDTALHIAVSDGRSDIVLKLVESMGQNASNVLKLQNEKGNTALHLAAALGNAAFVKIGC-----LDIQSLNIKIKL 81 (103)
Q Consensus 7 ~d~~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~-----~~~~~~~~~~tp 81 (103)
....|.|+|++|+.+|+.++++.|+..|+ ++|.+|..|.|+|+.|+.+||.+++++|+ +....+..|.|+
T Consensus 336 AsQ~gQTALMLAVSHGr~d~vk~LLacgA-----dVNiQDdDGSTALMCA~EHGhkEivklLLA~p~cd~sLtD~DgSTA 410 (452)
T KOG0514|consen 336 ASQHGQTALMLAVSHGRVDMVKALLACGA-----DVNIQDDDGSTALMCAAEHGHKEIVKLLLAVPSCDISLTDVDGSTA 410 (452)
T ss_pred hhhhcchhhhhhhhcCcHHHHHHHHHccC-----CCccccCCccHHHhhhhhhChHHHHHHHhccCcccceeecCCCchh
Confidence 34678999999999999999999999998 99999999999999999999999999864 333444677899
Q ss_pred HHHHHhcCchhhhHhh--hhhcc
Q 043593 82 LDIQSLNIKFKILDIQ--SLNIK 102 (103)
Q Consensus 82 l~~A~~~~~~~~~~~~--~~~~~ 102 (103)
|.+|...|+.++..++ -+|||
T Consensus 411 l~IAleagh~eIa~mlYa~~n~~ 433 (452)
T KOG0514|consen 411 LSIALEAGHREIAVMLYAHMNIK 433 (452)
T ss_pred hhhHHhcCchHHHHHHHHHHHhh
Confidence 9999999999998887 55554
No 30
>PHA03095 ankyrin-like protein; Provisional
Probab=99.59 E-value=1.1e-14 Score=96.69 Aligned_cols=91 Identities=20% Similarity=0.161 Sum_probs=64.8
Q ss_pred cccccCCCCCCcHHHHHHHcC---CHHHHHHHHHhcCcCchhhhcccccCCChHHHHHHHcC-CHHHHhhhhhhhhcc--
Q 043593 2 IQAAKITNSEDTALHIAVSDG---RSDIVLKLVESMGQNASNVLKLQNEKGNTALHLAAALG-NAAFVKIGCLDIQSL-- 75 (103)
Q Consensus 2 a~~~~~d~~g~t~lh~a~~~~---~~~~~~~Ll~~~~~~~~~~~~~~~~~g~tpl~~a~~~~-~~~~~~~l~~~~~~~-- 75 (103)
|+....+..|.||||+|+..+ +.+++++|++.|. +++.++..|.||||+|+..+ ..+++++|...++..
T Consensus 38 a~vn~~~~~g~t~Lh~a~~~~~~~~~~iv~~Ll~~Ga-----din~~~~~g~TpLh~A~~~~~~~~iv~lLl~~ga~in~ 112 (471)
T PHA03095 38 ADVNFRGEYGKTPLHLYLHYSSEKVKDIVRLLLEAGA-----DVNAPERCGFTPLHLYLYNATTLDVIKLLIKAGADVNA 112 (471)
T ss_pred CCcccCCCCCCCHHHHHHHhcCCChHHHHHHHHHCCC-----CCCCCCCCCCCHHHHHHHcCCcHHHHHHHHHcCCCCCC
Confidence 345566777888888888777 7778888888876 77777778888888888877 477777766554433
Q ss_pred --ccCCcHHHHHH--hcCchhhhHhh
Q 043593 76 --NIKIKLLDIQS--LNIKFKILDIQ 97 (103)
Q Consensus 76 --~~~~tpl~~A~--~~~~~~~~~~~ 97 (103)
..|.||||+|+ ..++.+++++|
T Consensus 113 ~~~~g~tpLh~a~~~~~~~~~iv~~L 138 (471)
T PHA03095 113 KDKVGRTPLHVYLSGFNINPKVIRLL 138 (471)
T ss_pred CCCCCCCHHHHHhhCCcCCHHHHHHH
Confidence 34568888887 45566777665
No 31
>PHA02878 ankyrin repeat protein; Provisional
Probab=99.59 E-value=1.1e-14 Score=97.13 Aligned_cols=89 Identities=19% Similarity=0.199 Sum_probs=72.6
Q ss_pred cccccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCcCchhhhcccccCCChHHHHHHHc-CCHHHHhhhhhhhhccc----
Q 043593 2 IQAAKITNSEDTALHIAVSDGRSDIVLKLVESMGQNASNVLKLQNEKGNTALHLAAAL-GNAAFVKIGCLDIQSLN---- 76 (103)
Q Consensus 2 a~~~~~d~~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~g~tpl~~a~~~-~~~~~~~~l~~~~~~~~---- 76 (103)
|+....|..|.||||.|+..++.+++++|++.|. +++.+|..|.||||+|+.. ++.+++++|+..++..+
T Consensus 192 ad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~ga-----~in~~d~~g~TpLh~A~~~~~~~~iv~~Ll~~gadvn~~~~ 266 (477)
T PHA02878 192 ANVNIPDKTNNSPLHHAVKHYNKPIVHILLENGA-----STDARDKCGNTPLHISVGYCKDYDILKLLLEHGVDVNAKSY 266 (477)
T ss_pred CCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcCC-----CCCCCCCCCCCHHHHHHHhcCCHHHHHHHHHcCCCCCccCC
Confidence 4566788999999999999999999999999997 8899999999999999965 68899998876654432
Q ss_pred -cCCcHHHHHHhcCchhhhHhh
Q 043593 77 -IKIKLLDIQSLNIKFKILDIQ 97 (103)
Q Consensus 77 -~~~tpl~~A~~~~~~~~~~~~ 97 (103)
.|.||||+| .++.+++++|
T Consensus 267 ~~g~TpLh~A--~~~~~~v~~L 286 (477)
T PHA02878 267 ILGLTALHSS--IKSERKLKLL 286 (477)
T ss_pred CCCCCHHHHH--ccCHHHHHHH
Confidence 456888888 4566676665
No 32
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.59 E-value=6e-15 Score=91.65 Aligned_cols=91 Identities=21% Similarity=0.088 Sum_probs=77.8
Q ss_pred cccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCcCchhhhcccccCCChHHHHHHHcCCHHHHhhhhhhhhcc----ccCC
Q 043593 4 AAKITNSEDTALHIAVSDGRSDIVLKLVESMGQNASNVLKLQNEKGNTALHLAAALGNAAFVKIGCLDIQSL----NIKI 79 (103)
Q Consensus 4 ~~~~d~~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~~~----~~~~ 79 (103)
.+.-|..|.+|||+||..||..+++.|+.+|. -++..+....||||+|+.+|+.++++.|+...+.. .-|.
T Consensus 27 ln~gddhgfsplhwaakegh~aivemll~rga-----rvn~tnmgddtplhlaaahghrdivqkll~~kadvnavnehgn 101 (448)
T KOG0195|consen 27 LNVGDDHGFSPLHWAAKEGHVAIVEMLLSRGA-----RVNSTNMGDDTPLHLAAAHGHRDIVQKLLSRKADVNAVNEHGN 101 (448)
T ss_pred cccccccCcchhhhhhhcccHHHHHHHHhccc-----ccccccCCCCcchhhhhhcccHHHHHHHHHHhcccchhhccCC
Confidence 45568899999999999999999999999998 68888888889999999999999999877554433 4567
Q ss_pred cHHHHHHhcCchhhhHhhhh
Q 043593 80 KLLDIQSLNIKFKILDIQSL 99 (103)
Q Consensus 80 tpl~~A~~~~~~~~~~~~~~ 99 (103)
||||+|++.|...+.+-+-.
T Consensus 102 tplhyacfwgydqiaedli~ 121 (448)
T KOG0195|consen 102 TPLHYACFWGYDQIAEDLIS 121 (448)
T ss_pred CchhhhhhhcHHHHHHHHHh
Confidence 99999999999988876643
No 33
>PHA02874 ankyrin repeat protein; Provisional
Probab=99.58 E-value=1.7e-14 Score=95.23 Aligned_cols=82 Identities=20% Similarity=0.217 Sum_probs=63.1
Q ss_pred cccccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCcCchhhhcccccCCChHHHHHHHcCCHHHHhhhhhhhhcc----cc
Q 043593 2 IQAAKITNSEDTALHIAVSDGRSDIVLKLVESMGQNASNVLKLQNEKGNTALHLAAALGNAAFVKIGCLDIQSL----NI 77 (103)
Q Consensus 2 a~~~~~d~~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~~~----~~ 77 (103)
++....|..|.||||+|+..++.+++++|++.|. +++..+..|.||||+|+..|+.++++++...+... ..
T Consensus 148 ad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g~-----~~n~~~~~g~tpL~~A~~~g~~~iv~~Ll~~g~~i~~~~~~ 222 (434)
T PHA02874 148 ADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGA-----YANVKDNNGESPLHNAAEYGDYACIKLLIDHGNHIMNKCKN 222 (434)
T ss_pred CCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCC-----CCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCcCCCCC
Confidence 4556778899999999999999999999999987 78888899999999999999999998876544322 22
Q ss_pred CCcHHHHHHhc
Q 043593 78 KIKLLDIQSLN 88 (103)
Q Consensus 78 ~~tpl~~A~~~ 88 (103)
|.||||+|+..
T Consensus 223 g~TpL~~A~~~ 233 (434)
T PHA02874 223 GFTPLHNAIIH 233 (434)
T ss_pred CCCHHHHHHHC
Confidence 33455544443
No 34
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.57 E-value=2.2e-14 Score=83.96 Aligned_cols=92 Identities=13% Similarity=0.161 Sum_probs=73.3
Q ss_pred cccccCCCCCCcHHHHHHHcCCH----HHHHHHHHhcCcCchhhhcccccCCChHHHHHHHcCCHHH---Hhhhhhhhhc
Q 043593 2 IQAAKITNSEDTALHIAVSDGRS----DIVLKLVESMGQNASNVLKLQNEKGNTALHLAAALGNAAF---VKIGCLDIQS 74 (103)
Q Consensus 2 a~~~~~d~~g~t~lh~a~~~~~~----~~~~~Ll~~~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~---~~~l~~~~~~ 74 (103)
+++...+.++.+++|.||..|+. +++++|.+.+. .++..|..|.||||+|+..|+.+. +++|...++.
T Consensus 11 ~~~~~~~~~~~~~l~~a~~~g~~~~l~~~~~~l~~~g~-----~~~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gad 85 (166)
T PHA02743 11 LGAVEIDEDEQNTFLRICRTGNIYELMEVAPFISGDGH-----LLHRYDHHGRQCTHMVAWYDRANAVMKIELLVNMGAD 85 (166)
T ss_pred hHHhhhccCCCcHHHHHHHcCCHHHHHHHHHHHhhcch-----hhhccCCCCCcHHHHHHHhCccCHHHHHHHHHHcCCC
Confidence 45556788899999999999998 45556777776 788889999999999999988654 5666654433
Q ss_pred c-----ccCCcHHHHHHhcCchhhhHhhh
Q 043593 75 L-----NIKIKLLDIQSLNIKFKILDIQS 98 (103)
Q Consensus 75 ~-----~~~~tpl~~A~~~~~~~~~~~~~ 98 (103)
. ..+.||||+|+..++.++++++-
T Consensus 86 in~~d~~~g~TpLh~A~~~g~~~iv~~Ll 114 (166)
T PHA02743 86 INARELGTGNTLLHIAASTKNYELAEWLC 114 (166)
T ss_pred CCCCCCCCCCcHHHHHHHhCCHHHHHHHH
Confidence 2 25679999999999999999874
No 35
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.56 E-value=4.9e-14 Score=88.98 Aligned_cols=90 Identities=19% Similarity=0.031 Sum_probs=74.4
Q ss_pred ccCCCCCCcH-HHHHHHcCCHHHHHHHHHhcCcCchhhhcccc----cCCChHHHHHHHcCCHHHHhhhhhhhhccc---
Q 043593 5 AKITNSEDTA-LHIAVSDGRSDIVLKLVESMGQNASNVLKLQN----EKGNTALHLAAALGNAAFVKIGCLDIQSLN--- 76 (103)
Q Consensus 5 ~~~d~~g~t~-lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~----~~g~tpl~~a~~~~~~~~~~~l~~~~~~~~--- 76 (103)
...|..|.|+ ||.|+..|+.++++.|++.|+ +++.++ ..|.||||+|+..++.+++++|...++..+
T Consensus 26 ~~~d~~~~~~lL~~A~~~~~~eivk~LL~~GA-----diN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GADVN~~~ 100 (300)
T PHA02884 26 KKKNKICIANILYSSIKFHYTDIIDAILKLGA-----DPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADVNRYA 100 (300)
T ss_pred hccCcCCCCHHHHHHHHcCCHHHHHHHHHCCC-----CccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcCccc
Confidence 3567777776 555666789999999999998 788764 589999999999999999999887665543
Q ss_pred --cCCcHHHHHHhcCchhhhHhhhh
Q 043593 77 --IKIKLLDIQSLNIKFKILDIQSL 99 (103)
Q Consensus 77 --~~~tpl~~A~~~~~~~~~~~~~~ 99 (103)
.+.||||+|+..++.++++++-.
T Consensus 101 ~~~g~TpLh~Aa~~~~~eivklLL~ 125 (300)
T PHA02884 101 EEAKITPLYISVLHGCLKCLEILLS 125 (300)
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 35799999999999999998843
No 36
>PHA03100 ankyrin repeat protein; Provisional
Probab=99.55 E-value=3.2e-14 Score=94.66 Aligned_cols=91 Identities=18% Similarity=0.214 Sum_probs=77.0
Q ss_pred cccccCCCCCCcHHHHHHHcC--CHHHHHHHHHhcCcCchhhhcccccCCChHHHHHHHcCCHHHHhhhhhhhhcccc--
Q 043593 2 IQAAKITNSEDTALHIAVSDG--RSDIVLKLVESMGQNASNVLKLQNEKGNTALHLAAALGNAAFVKIGCLDIQSLNI-- 77 (103)
Q Consensus 2 a~~~~~d~~g~t~lh~a~~~~--~~~~~~~Ll~~~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~~~~~-- 77 (103)
++....|..|.||||+|+..+ +.+++++|++.|. +++.++..|.||||+|+..|+.++++++...++..+.
T Consensus 132 ~~~~~~~~~g~t~L~~A~~~~~~~~~iv~~Ll~~g~-----din~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~~ 206 (480)
T PHA03100 132 ANVNIKNSDGENLLHLYLESNKIDLKILKLLIDKGV-----DINAKNRYGYTPLHIAVEKGNIDVIKFLLDNGADINAGD 206 (480)
T ss_pred CCCCccCCCCCcHHHHHHHcCCChHHHHHHHHHCCC-----CcccccCCCCCHHHHHHHhCCHHHHHHHHHcCCCccCCC
Confidence 345678899999999999999 9999999999998 8899999999999999999999999998766554432
Q ss_pred --C------CcHHHHHHhcCc--hhhhHhh
Q 043593 78 --K------IKLLDIQSLNIK--FKILDIQ 97 (103)
Q Consensus 78 --~------~tpl~~A~~~~~--~~~~~~~ 97 (103)
+ .||+|.|+..++ .+++++|
T Consensus 207 ~~~~~~~~~~t~l~~a~~~~~~~~~iv~~L 236 (480)
T PHA03100 207 IETLLFTIFETPLHIAACYNEITLEVVNYL 236 (480)
T ss_pred CCCCcHHHHHhHHHHHHHhCcCcHHHHHHH
Confidence 2 678888888877 7777766
No 37
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.54 E-value=8.2e-15 Score=95.67 Aligned_cols=92 Identities=21% Similarity=0.153 Sum_probs=57.4
Q ss_pred ccccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCcCchhhhcccccCCChHHHHHHHcCCHHHHhhhhhhhhcc----ccC
Q 043593 3 QAAKITNSEDTALHIAVSDGRSDIVLKLVESMGQNASNVLKLQNEKGNTALHLAAALGNAAFVKIGCLDIQSL----NIK 78 (103)
Q Consensus 3 ~~~~~d~~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~~~----~~~ 78 (103)
.++..+....|||..||.-||.+++++|++++. +++..+.+|.|-||+|+..|+.+++++|...++.. ..|
T Consensus 109 ~VN~tT~TNStPLraACfDG~leivKyLvE~ga-----d~~IanrhGhTcLmIa~ykGh~~I~qyLle~gADvn~ks~kG 183 (615)
T KOG0508|consen 109 SVNDTTRTNSTPLRAACFDGHLEIVKYLVEHGA-----DPEIANRHGHTCLMIACYKGHVDIAQYLLEQGADVNAKSYKG 183 (615)
T ss_pred ccccccccCCccHHHHHhcchhHHHHHHHHcCC-----CCcccccCCCeeEEeeeccCchHHHHHHHHhCCCcchhcccC
Confidence 344455555666666666666666666666665 66666666666666666666666666665444333 234
Q ss_pred CcHHHHHHhcCchhhhHhhhh
Q 043593 79 IKLLDIQSLNIKFKILDIQSL 99 (103)
Q Consensus 79 ~tpl~~A~~~~~~~~~~~~~~ 99 (103)
+|+||.++..|+.+++++|-.
T Consensus 184 NTALH~caEsG~vdivq~Ll~ 204 (615)
T KOG0508|consen 184 NTALHDCAESGSVDIVQLLLK 204 (615)
T ss_pred chHHHhhhhcccHHHHHHHHh
Confidence 566666666666666666643
No 38
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=99.54 E-value=3.6e-14 Score=88.00 Aligned_cols=94 Identities=18% Similarity=0.086 Sum_probs=83.5
Q ss_pred ccccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCcCchhhhcc-cccCCChHHHHHHHcCCHHHHhhhhhhhhcc----cc
Q 043593 3 QAAKITNSEDTALHIAVSDGRSDIVLKLVESMGQNASNVLKL-QNEKGNTALHLAAALGNAAFVKIGCLDIQSL----NI 77 (103)
Q Consensus 3 ~~~~~d~~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~-~~~~g~tpl~~a~~~~~~~~~~~l~~~~~~~----~~ 77 (103)
++...|.+|.|+|..|+..|+.+.++.|++.|+ |+|- ++..+.||||+|+..|+.++.+.+++.++.. ..
T Consensus 37 ~vn~~D~sGMs~LahAaykGnl~~v~lll~~ga-----DvN~~qhg~~YTpLmFAALSGn~dvcrllldaGa~~~~vNsv 111 (396)
T KOG1710|consen 37 QVNQRDPSGMSVLAHAAYKGNLTLVELLLELGA-----DVNDKQHGTLYTPLMFAALSGNQDVCRLLLDAGARMYLVNSV 111 (396)
T ss_pred hhhccCCCcccHHHHHHhcCcHHHHHHHHHhCC-----CcCcccccccccHHHHHHHcCCchHHHHHHhccCccccccch
Confidence 467899999999999999999999999999998 6665 6788999999999999999999988877655 35
Q ss_pred CCcHHHHHHhcCchhhhHhhhhhc
Q 043593 78 KIKLLDIQSLNIKFKILDIQSLNI 101 (103)
Q Consensus 78 ~~tpl~~A~~~~~~~~~~~~~~~~ 101 (103)
|+|+-.+|++-|+++++.++.+.+
T Consensus 112 grTAaqmAAFVG~H~CV~iINN~~ 135 (396)
T KOG1710|consen 112 GRTAAQMAAFVGHHECVAIINNHI 135 (396)
T ss_pred hhhHHHHHHHhcchHHHHHHhccc
Confidence 679999999999999999987654
No 39
>PHA02798 ankyrin-like protein; Provisional
Probab=99.54 E-value=4.1e-14 Score=94.64 Aligned_cols=92 Identities=18% Similarity=0.167 Sum_probs=70.8
Q ss_pred cccccCCCCCCcHHHHHHHc-----CCHHHHHHHHHhcCcCchhhhcccccCCChHHHHHHHcC---CHHHHhhhhhhhh
Q 043593 2 IQAAKITNSEDTALHIAVSD-----GRSDIVLKLVESMGQNASNVLKLQNEKGNTALHLAAALG---NAAFVKIGCLDIQ 73 (103)
Q Consensus 2 a~~~~~d~~g~t~lh~a~~~-----~~~~~~~~Ll~~~~~~~~~~~~~~~~~g~tpl~~a~~~~---~~~~~~~l~~~~~ 73 (103)
|+....|..|.||||.++.. ++.+++++|++.|+ +++.+|..|.||||+|+..+ +.++++++...++
T Consensus 62 advn~~d~~g~TpL~~~~~n~~~~~~~~~iv~~Ll~~Ga-----diN~~d~~G~TpLh~a~~~~~~~~~~iv~~Ll~~Ga 136 (489)
T PHA02798 62 ANVNGLDNEYSTPLCTILSNIKDYKHMLDIVKILIENGA-----DINKKNSDGETPLYCLLSNGYINNLEILLFMIENGA 136 (489)
T ss_pred CCCCCCCCCCCChHHHHHHhHHhHHhHHHHHHHHHHCCC-----CCCCCCCCcCcHHHHHHHcCCcChHHHHHHHHHcCC
Confidence 45667888899999887753 56788899998887 78888888999999888765 6778887766554
Q ss_pred cc----ccCCcHHHHHHhcCc---hhhhHhhh
Q 043593 74 SL----NIKIKLLDIQSLNIK---FKILDIQS 98 (103)
Q Consensus 74 ~~----~~~~tpl~~A~~~~~---~~~~~~~~ 98 (103)
.. ..|.||||+|+..++ .+++++|-
T Consensus 137 dvn~~d~~g~tpL~~a~~~~~~~~~~vv~~Ll 168 (489)
T PHA02798 137 DTTLLDKDGFTMLQVYLQSNHHIDIEIIKLLL 168 (489)
T ss_pred CccccCCCCCcHHHHHHHcCCcchHHHHHHHH
Confidence 43 455689999888777 77777763
No 40
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.54 E-value=2.5e-14 Score=98.03 Aligned_cols=95 Identities=21% Similarity=0.163 Sum_probs=80.0
Q ss_pred cccccCCCCCCcHHHHHHHcCCHHHHHHHHH-hcCcCchhhhcccccCCChHHHHHHHcCCHHHHhhhhhhhhc------
Q 043593 2 IQAAKITNSEDTALHIAVSDGRSDIVLKLVE-SMGQNASNVLKLQNEKGNTALHLAAALGNAAFVKIGCLDIQS------ 74 (103)
Q Consensus 2 a~~~~~d~~g~t~lh~a~~~~~~~~~~~Ll~-~~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~~------ 74 (103)
|....++.++.||||.||++|++.+++.|++ .+.. ..+..|..|.||||.|++.||..+++.|+..++.
T Consensus 297 a~I~~kn~d~~spLH~AA~yg~~ntv~rLL~~~~~r----llne~D~~g~tpLHlaa~~gH~~v~qlLl~~GA~~~~~~e 372 (929)
T KOG0510|consen 297 ASINSKNKDEESPLHFAAIYGRINTVERLLQESDTR----LLNESDLHGMTPLHLAAKSGHDRVVQLLLNKGALFLNMSE 372 (929)
T ss_pred CcccccCCCCCCchHHHHHcccHHHHHHHHhCcCcc----ccccccccCCCchhhhhhcCHHHHHHHHHhcChhhhcccc
Confidence 4456678999999999999999999999999 4433 6788899999999999999999999997654432
Q ss_pred -cccCCcHHHHHHhcCchhhhHhhhhh
Q 043593 75 -LNIKIKLLDIQSLNIKFKILDIQSLN 100 (103)
Q Consensus 75 -~~~~~tpl~~A~~~~~~~~~~~~~~~ 100 (103)
+.++.||||+|+..|+..+++.+-.+
T Consensus 373 ~D~dg~TaLH~Aa~~g~~~av~~Li~~ 399 (929)
T KOG0510|consen 373 ADSDGNTALHLAAKYGNTSAVQKLISH 399 (929)
T ss_pred cccCCchhhhHHHHhccHHHHHHHHHc
Confidence 34567999999999999999887443
No 41
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.54 E-value=1e-13 Score=83.83 Aligned_cols=83 Identities=20% Similarity=0.143 Sum_probs=46.2
Q ss_pred CCCcHHHHHHHc---CCHHHHHHHHHhcCcCchhhhcccccCCChHHHHHHH--cCCHHHHhhhhhhhhcc----ccCCc
Q 043593 10 SEDTALHIAVSD---GRSDIVLKLVESMGQNASNVLKLQNEKGNTALHLAAA--LGNAAFVKIGCLDIQSL----NIKIK 80 (103)
Q Consensus 10 ~g~t~lh~a~~~---~~~~~~~~Ll~~~~~~~~~~~~~~~~~g~tpl~~a~~--~~~~~~~~~l~~~~~~~----~~~~t 80 (103)
.|+||||+|+.. ++.+++++|++.|. +++.+|..|.||||+++. .++.+++++|...++.. ..+.|
T Consensus 86 ~g~TpLh~a~~~~~~~~~eiv~~Ll~~ga-----din~~d~~G~TpLh~a~~~~~~~~~iv~~Li~~gadin~~d~~g~t 160 (209)
T PHA02859 86 NNLSALHHYLSFNKNVEPEILKILIDSGS-----SITEEDEDGKNLLHMYMCNFNVRINVIKLLIDSGVSFLNKDFDNNN 160 (209)
T ss_pred CCCCHHHHHHHhCccccHHHHHHHHHCCC-----CCCCcCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCcccccCCCCc
Confidence 566666665543 24566666666665 566666666666666553 24566666554433322 23456
Q ss_pred HHHH-HHhcCchhhhHhh
Q 043593 81 LLDI-QSLNIKFKILDIQ 97 (103)
Q Consensus 81 pl~~-A~~~~~~~~~~~~ 97 (103)
|||. +...++.+++++|
T Consensus 161 ~Lh~~a~~~~~~~iv~~L 178 (209)
T PHA02859 161 ILYSYILFHSDKKIFDFL 178 (209)
T ss_pred HHHHHHHhcCCHHHHHHH
Confidence 6664 3445566666655
No 42
>PHA02876 ankyrin repeat protein; Provisional
Probab=99.53 E-value=7.6e-14 Score=96.45 Aligned_cols=92 Identities=17% Similarity=0.073 Sum_probs=64.3
Q ss_pred cccccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCcCchhhhcccccCCChHHHHHHHcCC-HHHHhhhhhhhhc----cc
Q 043593 2 IQAAKITNSEDTALHIAVSDGRSDIVLKLVESMGQNASNVLKLQNEKGNTALHLAAALGN-AAFVKIGCLDIQS----LN 76 (103)
Q Consensus 2 a~~~~~d~~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~g~tpl~~a~~~~~-~~~~~~l~~~~~~----~~ 76 (103)
|+....|..|.||||+|+..++.+++++|++.|. +++..+..|.||||+|+..++ ..+++++...++. ..
T Consensus 366 adin~~d~~G~TpLh~Aa~~~~~~iv~~Ll~~ga-----d~~~~~~~g~T~Lh~A~~~~~~~~~vk~Ll~~gadin~~d~ 440 (682)
T PHA02876 366 ANVNARDYCDKTPIHYAAVRNNVVIINTLLDYGA-----DIEALSQKIGTALHFALCGTNPYMSVKTLIDRGANVNSKNK 440 (682)
T ss_pred CCCccCCCCCCCHHHHHHHcCCHHHHHHHHHCCC-----CccccCCCCCchHHHHHHcCCHHHHHHHHHhCCCCCCcCCC
Confidence 3456677788888888888888888888888776 677777777777777776555 3445655544333 24
Q ss_pred cCCcHHHHHHhcC-chhhhHhhh
Q 043593 77 IKIKLLDIQSLNI-KFKILDIQS 98 (103)
Q Consensus 77 ~~~tpl~~A~~~~-~~~~~~~~~ 98 (103)
.|.||||+|+..+ +.+++++|-
T Consensus 441 ~G~TpLh~Aa~~~~~~~iv~lLl 463 (682)
T PHA02876 441 DLSTPLHYACKKNCKLDVIEMLL 463 (682)
T ss_pred CCChHHHHHHHhCCcHHHHHHHH
Confidence 5678888888765 577877773
No 43
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=99.53 E-value=7.2e-14 Score=96.87 Aligned_cols=91 Identities=18% Similarity=0.129 Sum_probs=64.3
Q ss_pred cccccCCCCCCcHHHHHHHcCC--HHHHHHHHHhcCcCchhhhcccccCCChHHHHHH----------------------
Q 043593 2 IQAAKITNSEDTALHIAVSDGR--SDIVLKLVESMGQNASNVLKLQNEKGNTALHLAA---------------------- 57 (103)
Q Consensus 2 a~~~~~d~~g~t~lh~a~~~~~--~~~~~~Ll~~~~~~~~~~~~~~~~~g~tpl~~a~---------------------- 57 (103)
|+.+..|..|.||||+|+..|+ .+++++|++.|+ +++.+|..|.||||+|+
T Consensus 203 ADVN~kD~~G~TPLH~Aa~~g~~~~eIVklLLe~GA-----DVN~kD~~G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~ 277 (764)
T PHA02716 203 VNVNLQNNHLITPLHTYLITGNVCASVIKKIIELGG-----DMDMKCVNGMSPIMTYIINIDNINPEITNIYIESLDGNK 277 (764)
T ss_pred CCCCCCCCCCCCHHHHHHHcCCCCHHHHHHHHHcCC-----CCCCCCCCCCCHHHHHHHhhhccCHHHHHHHHHhccccc
Confidence 4566778888888888888875 478888888887 78888888888888653
Q ss_pred ---------------HcCCHHHHhhhhhhhhcc----ccCCcHHHHHHh--cCchhhhHhh
Q 043593 58 ---------------ALGNAAFVKIGCLDIQSL----NIKIKLLDIQSL--NIKFKILDIQ 97 (103)
Q Consensus 58 ---------------~~~~~~~~~~l~~~~~~~----~~~~tpl~~A~~--~~~~~~~~~~ 97 (103)
..|+.+++++|+..++.. ..|+||||+|+. .++.+++++|
T Consensus 278 ~~~~~~~L~~~i~AA~~g~leiVklLLe~GAdIN~kD~~G~TPLH~Aaa~~~~~~eIVklL 338 (764)
T PHA02716 278 VKNIPMILHSYITLARNIDISVVYSFLQPGVKLHYKDSAGRTCLHQYILRHNISTDIIKLL 338 (764)
T ss_pred cccchhhhHHHHHHHHcCCHHHHHHHHhCCCceeccCCCCCCHHHHHHHHhCCCchHHHHH
Confidence 335556666655444332 345688888753 4567787777
No 44
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.51 E-value=1.4e-13 Score=83.21 Aligned_cols=83 Identities=10% Similarity=0.026 Sum_probs=69.5
Q ss_pred cccccCCCCCCcHHHHHHH--cCCHHHHHHHHHhcCcCchhhhcccccCCChHHHH-HHHcCCHHHHhhhhhhhhcc---
Q 043593 2 IQAAKITNSEDTALHIAVS--DGRSDIVLKLVESMGQNASNVLKLQNEKGNTALHL-AAALGNAAFVKIGCLDIQSL--- 75 (103)
Q Consensus 2 a~~~~~d~~g~t~lh~a~~--~~~~~~~~~Ll~~~~~~~~~~~~~~~~~g~tpl~~-a~~~~~~~~~~~l~~~~~~~--- 75 (103)
|+....|.+|.||||+|+. .++.+++++|++.|. +++.+|..|.||||. ++..++.+++++|+..++..
T Consensus 114 adin~~d~~G~TpLh~a~~~~~~~~~iv~~Li~~ga-----din~~d~~g~t~Lh~~a~~~~~~~iv~~Ll~~Gadi~~~ 188 (209)
T PHA02859 114 SSITEEDEDGKNLLHMYMCNFNVRINVIKLLIDSGV-----SFLNKDFDNNNILYSYILFHSDKKIFDFLTSLGIDINET 188 (209)
T ss_pred CCCCCcCCCCCCHHHHHHHhccCCHHHHHHHHHcCC-----CcccccCCCCcHHHHHHHhcCCHHHHHHHHHcCCCCCCC
Confidence 5677899999999999876 468999999999998 899999999999995 56788999999887655443
Q ss_pred -ccCCcHHHHHHhcC
Q 043593 76 -NIKIKLLDIQSLNI 89 (103)
Q Consensus 76 -~~~~tpl~~A~~~~ 89 (103)
..|.|||++|...+
T Consensus 189 d~~g~tpl~la~~~~ 203 (209)
T PHA02859 189 NKSGYNCYDLIKFRN 203 (209)
T ss_pred CCCCCCHHHHHhhhh
Confidence 45679999998654
No 45
>PHA02795 ankyrin-like protein; Provisional
Probab=99.51 E-value=8.8e-14 Score=91.32 Aligned_cols=85 Identities=16% Similarity=0.025 Sum_probs=72.7
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHHhcCcCchhhhcccccCCChHHHHHHHcCCHHHHhhhhhhhhcc----ccCCcHHHH
Q 043593 9 NSEDTALHIAVSDGRSDIVLKLVESMGQNASNVLKLQNEKGNTALHLAAALGNAAFVKIGCLDIQSL----NIKIKLLDI 84 (103)
Q Consensus 9 ~~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~~~----~~~~tpl~~ 84 (103)
..+.|++|.++..++.+++++|+++|+ +++.+|..|.||||+|+..|+.+++++|...++.. ..|.||||+
T Consensus 186 ~~~~t~l~~a~~~~~~eIve~LIs~GA-----DIN~kD~~G~TpLh~Aa~~g~~eiVelLL~~GAdIN~~d~~G~TpLh~ 260 (437)
T PHA02795 186 IIQYTRGFLVDEPTVLEIYKLCIPYIE-----DINQLDAGGRTLLYRAIYAGYIDLVSWLLENGANVNAVMSNGYTCLDV 260 (437)
T ss_pred hhccchhHHHHhcCHHHHHHHHHhCcC-----CcCcCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHH
Confidence 347788899999999999999999997 89999999999999999999999999987766554 456799999
Q ss_pred HHhcCc--------hhhhHhhh
Q 043593 85 QSLNIK--------FKILDIQS 98 (103)
Q Consensus 85 A~~~~~--------~~~~~~~~ 98 (103)
|+..|+ .+++++|-
T Consensus 261 Aa~~g~~~~~~~~~~eIvelLL 282 (437)
T PHA02795 261 AVDRGSVIARRETHLKILEILL 282 (437)
T ss_pred HHHcCCcccccccHHHHHHHHH
Confidence 999884 57888774
No 46
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.51 E-value=2.4e-14 Score=93.55 Aligned_cols=91 Identities=23% Similarity=0.217 Sum_probs=80.9
Q ss_pred cccccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCcCchhhhcccccCCChHHHHHHHcCCHHHHhhhhhhhhcc---ccC
Q 043593 2 IQAAKITNSEDTALHIAVSDGRSDIVLKLVESMGQNASNVLKLQNEKGNTALHLAAALGNAAFVKIGCLDIQSL---NIK 78 (103)
Q Consensus 2 a~~~~~d~~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~~~---~~~ 78 (103)
|+-+..|..|.|.||+||.+||.+++++|++.|. +++.++..|.|+||.++..|+.+++++|+..++.. ..|
T Consensus 141 ad~~IanrhGhTcLmIa~ykGh~~I~qyLle~gA-----Dvn~ks~kGNTALH~caEsG~vdivq~Ll~~ga~i~~d~~G 215 (615)
T KOG0508|consen 141 ADPEIANRHGHTCLMIACYKGHVDIAQYLLEQGA-----DVNAKSYKGNTALHDCAESGSVDIVQLLLKHGAKIDVDGHG 215 (615)
T ss_pred CCCcccccCCCeeEEeeeccCchHHHHHHHHhCC-----CcchhcccCchHHHhhhhcccHHHHHHHHhCCceeeecCCC
Confidence 4567789999999999999999999999999998 89999999999999999999999999987665544 456
Q ss_pred CcHHHHHHhcCchhhhHhh
Q 043593 79 IKLLDIQSLNIKFKILDIQ 97 (103)
Q Consensus 79 ~tpl~~A~~~~~~~~~~~~ 97 (103)
.|||..|+..|+.++++.|
T Consensus 216 mtPL~~Aa~tG~~~iVe~L 234 (615)
T KOG0508|consen 216 MTPLLLAAVTGHTDIVERL 234 (615)
T ss_pred CchHHHHhhhcchHHHHHH
Confidence 7999999999999998876
No 47
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.50 E-value=2.1e-14 Score=91.21 Aligned_cols=89 Identities=27% Similarity=0.168 Sum_probs=64.9
Q ss_pred ccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCcCchhhhcccccCC-----------------------------------
Q 043593 5 AKITNSEDTALHIAVSDGRSDIVLKLVESMGQNASNVLKLQNEKG----------------------------------- 49 (103)
Q Consensus 5 ~~~d~~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~g----------------------------------- 49 (103)
+..|.+|+|+|||++.+.++++++.|++.+.. +++.++.-|
T Consensus 262 NlaDsNGNTALHYsVSHaNF~VV~~LLDSgvC----~VD~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~mgnVNaKAs 337 (452)
T KOG0514|consen 262 NLADSNGNTALHYAVSHANFDVVSILLDSGVC----DVDQQNRAGYTPVMLAALAKLKQPADRTVVERLFKMGDVNAKAS 337 (452)
T ss_pred hhhcCCCCeeeeeeecccchHHHHHHhccCcc----cccccccccccHHHHHHHHhhcchhhHHHHHHHHhccCcchhhh
Confidence 45677788888888888888888877777643 555555544
Q ss_pred ---ChHHHHHHHcCCHHHHhhhhhhhh----ccccCCcHHHHHHhcCchhhhHhh
Q 043593 50 ---NTALHLAAALGNAAFVKIGCLDIQ----SLNIKIKLLDIQSLNIKFKILDIQ 97 (103)
Q Consensus 50 ---~tpl~~a~~~~~~~~~~~l~~~~~----~~~~~~tpl~~A~~~~~~~~~~~~ 97 (103)
.|+|++|+.+|+.++++.|+.-++ .++.|.|+|++|+.+||.+++++|
T Consensus 338 Q~gQTALMLAVSHGr~d~vk~LLacgAdVNiQDdDGSTALMCA~EHGhkEivklL 392 (452)
T KOG0514|consen 338 QHGQTALMLAVSHGRVDMVKALLACGADVNIQDDDGSTALMCAAEHGHKEIVKLL 392 (452)
T ss_pred hhcchhhhhhhhcCcHHHHHHHHHccCCCccccCCccHHHhhhhhhChHHHHHHH
Confidence 556666678888888887654333 334566999999999999999887
No 48
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.50 E-value=1.5e-13 Score=96.65 Aligned_cols=87 Identities=20% Similarity=0.127 Sum_probs=76.5
Q ss_pred CCCCCCcHHHHHHHcCCHHHHHHHHHhcCcCchhhhcccccCCChHHHHHHHcCCHHHHhhhhhhhhcc----ccCCcHH
Q 043593 7 ITNSEDTALHIAVSDGRSDIVLKLVESMGQNASNVLKLQNEKGNTALHLAAALGNAAFVKIGCLDIQSL----NIKIKLL 82 (103)
Q Consensus 7 ~d~~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~~~----~~~~tpl 82 (103)
.+.++.++||.||..|+.++++.|++.|. +++..|..|.||||+|+..|+.+++++|+..++.. ..|.|||
T Consensus 521 ~~~~~~~~L~~Aa~~g~~~~l~~Ll~~G~-----d~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadin~~d~~G~TpL 595 (823)
T PLN03192 521 DDPNMASNLLTVASTGNAALLEELLKAKL-----DPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNVHIRDANGNTAL 595 (823)
T ss_pred CCccchhHHHHHHHcCCHHHHHHHHHCCC-----CCCCCCCCCCCHHHHHHHcChHHHHHHHHhcCCCCCCcCCCCCCHH
Confidence 34467899999999999999999999998 89999999999999999999999999987655443 4567999
Q ss_pred HHHHhcCchhhhHhhh
Q 043593 83 DIQSLNIKFKILDIQS 98 (103)
Q Consensus 83 ~~A~~~~~~~~~~~~~ 98 (103)
|+|+..|+.+++++|-
T Consensus 596 ~~A~~~g~~~iv~~L~ 611 (823)
T PLN03192 596 WNAISAKHHKIFRILY 611 (823)
T ss_pred HHHHHhCCHHHHHHHH
Confidence 9999999999998873
No 49
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.50 E-value=1.3e-13 Score=72.74 Aligned_cols=61 Identities=39% Similarity=0.459 Sum_probs=54.9
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHhcCcCchhhhcccccCCChHHHHHHHcCCHHHHhhhhhhhhccc
Q 043593 11 EDTALHIAVSDGRSDIVLKLVESMGQNASNVLKLQNEKGNTALHLAAALGNAAFVKIGCLDIQSLN 76 (103)
Q Consensus 11 g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~~~~ 76 (103)
|.||||+|+..|+.+++++|++.+. +++.+|..|.||||+|+..|+.++++++.+.+...+
T Consensus 26 ~~~~l~~A~~~~~~~~~~~Ll~~g~-----~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~ 86 (89)
T PF12796_consen 26 GNTALHYAAENGNLEIVKLLLENGA-----DINSQDKNGNTALHYAAENGNLEIVKLLLEHGADVN 86 (89)
T ss_dssp SSBHHHHHHHTTTHHHHHHHHHTTT-----CTT-BSTTSSBHHHHHHHTTHHHHHHHHHHTTT-TT
T ss_pred CCCHHHHHHHcCCHHHHHHHHHhcc-----cccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 8899999999999999999999998 899999999999999999999999999887765544
No 50
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=99.48 E-value=1.7e-13 Score=71.99 Aligned_cols=64 Identities=23% Similarity=0.173 Sum_probs=59.2
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHhcCcCchhhhcccccCCChHHHHHHHcCCHHHHhhhhhhhhccccC
Q 043593 10 SEDTALHIAVSDGRSDIVLKLVESMGQNASNVLKLQNEKGNTALHLAAALGNAAFVKIGCLDIQSLNIK 78 (103)
Q Consensus 10 ~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~~~~~~ 78 (103)
.|++|||+|+-+|..++++||+..|+ +++.+|++|-|||..|+..||..|+++|+..++.....
T Consensus 33 ggR~plhyAAD~GQl~ilefli~iGA-----~i~~kDKygITPLLsAvwEGH~~cVklLL~~GAdrt~~ 96 (117)
T KOG4214|consen 33 GGRTPLHYAADYGQLSILEFLISIGA-----NIQDKDKYGITPLLSAVWEGHRDCVKLLLQNGADRTIH 96 (117)
T ss_pred CCcccchHhhhcchHHHHHHHHHhcc-----ccCCccccCCcHHHHHHHHhhHHHHHHHHHcCccccee
Confidence 68999999999999999999999998 89999999999999999999999999998887776443
No 51
>PHA02876 ankyrin repeat protein; Provisional
Probab=99.48 E-value=3.3e-13 Score=93.31 Aligned_cols=92 Identities=14% Similarity=0.005 Sum_probs=75.2
Q ss_pred cccccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCcCchhhhcccccCCChHHHHHHHcCCHHHHhhhhhhh---------
Q 043593 2 IQAAKITNSEDTALHIAVSDGRSDIVLKLVESMGQNASNVLKLQNEKGNTALHLAAALGNAAFVKIGCLDI--------- 72 (103)
Q Consensus 2 a~~~~~d~~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~--------- 72 (103)
|+.+..|..|+||||+|+..|+.+++++|++.|+ +++..+..|.||||.|+..++.++++++....
T Consensus 169 advn~~d~~G~TpLh~Aa~~G~~~iv~~LL~~Ga-----d~n~~~~~g~t~L~~A~~~~~~~ivk~Ll~~~~~~~~~~~~ 243 (682)
T PHA02876 169 ADVNAKDIYCITPIHYAAERGNAKMVNLLLSYGA-----DVNIIALDDLSVLECAVDSKNIDTIKAIIDNRSNINKNDLS 243 (682)
T ss_pred CCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCC-----CcCccCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCcHH
Confidence 4567789999999999999999999999999998 88999999999999999999998887654321
Q ss_pred ------------------------hccccCCcHHHHHHhcCch-hhhHhhh
Q 043593 73 ------------------------QSLNIKIKLLDIQSLNIKF-KILDIQS 98 (103)
Q Consensus 73 ------------------------~~~~~~~tpl~~A~~~~~~-~~~~~~~ 98 (103)
.....|.||||+|+..++. ++++++-
T Consensus 244 L~~ai~~~~~~~~~~Ll~~g~~vn~~d~~g~TpLh~Aa~~~~~~~iv~lLl 294 (682)
T PHA02876 244 LLKAIRNEDLETSLLLYDAGFSVNSIDDCKNTPLHHASQAPSLSRLVPKLL 294 (682)
T ss_pred HHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHhCCCHHHHHHHHH
Confidence 1123467999999998875 5666653
No 52
>PHA02989 ankyrin repeat protein; Provisional
Probab=99.48 E-value=3.6e-13 Score=90.22 Aligned_cols=54 Identities=13% Similarity=0.027 Sum_probs=36.7
Q ss_pred ccccCCChHHHHHHHcCCHHHHhhhhhhhhcc----ccCCcHHHHHHhcCchhhhHhh
Q 043593 44 LQNEKGNTALHLAAALGNAAFVKIGCLDIQSL----NIKIKLLDIQSLNIKFKILDIQ 97 (103)
Q Consensus 44 ~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~~~----~~~~tpl~~A~~~~~~~~~~~~ 97 (103)
.+|..|.||||+|+..++.+++++|+..++.. ..|.|||++|+..++.++++.+
T Consensus 251 ~~d~~G~TpL~~Aa~~~~~~~v~~LL~~Gadin~~d~~G~TpL~~A~~~~~~~iv~~L 308 (494)
T PHA02989 251 KKDKKGFNPLLISAKVDNYEAFNYLLKLGDDIYNVSKDGDTVLTYAIKHGNIDMLNRI 308 (494)
T ss_pred CCCCCCCCHHHHHHHhcCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHH
Confidence 44555777777777777777777766554443 3445778877777777777654
No 53
>PHA02798 ankyrin-like protein; Provisional
Probab=99.47 E-value=4.5e-13 Score=89.70 Aligned_cols=93 Identities=20% Similarity=0.171 Sum_probs=77.5
Q ss_pred cccccCCCCCCcHHHHHHHcC---CHHHHHHHHHhcCcCchhhhcccccCCChHHHHHHHcCC---HHHHhhhhhhhhcc
Q 043593 2 IQAAKITNSEDTALHIAVSDG---RSDIVLKLVESMGQNASNVLKLQNEKGNTALHLAAALGN---AAFVKIGCLDIQSL 75 (103)
Q Consensus 2 a~~~~~d~~g~t~lh~a~~~~---~~~~~~~Ll~~~~~~~~~~~~~~~~~g~tpl~~a~~~~~---~~~~~~l~~~~~~~ 75 (103)
|+.+..|..|.||||+|+..+ +.+++++|++.|+ +++..|..|.||||+++..++ .+++++|+..++..
T Consensus 100 adiN~~d~~G~TpLh~a~~~~~~~~~~iv~~Ll~~Ga-----dvn~~d~~g~tpL~~a~~~~~~~~~~vv~~Ll~~gadi 174 (489)
T PHA02798 100 ADINKKNSDGETPLYCLLSNGYINNLEILLFMIENGA-----DTTLLDKDGFTMLQVYLQSNHHIDIEIIKLLLEKGVDI 174 (489)
T ss_pred CCCCCCCCCcCcHHHHHHHcCCcChHHHHHHHHHcCC-----CccccCCCCCcHHHHHHHcCCcchHHHHHHHHHhCCCc
Confidence 567788999999999999875 6899999999998 899999999999999999887 89999988766554
Q ss_pred c-----cCCcHHHHHHhc----CchhhhHhhhh
Q 043593 76 N-----IKIKLLDIQSLN----IKFKILDIQSL 99 (103)
Q Consensus 76 ~-----~~~tpl~~A~~~----~~~~~~~~~~~ 99 (103)
+ .+.||||.+... ++.++++++-.
T Consensus 175 n~~~~~~~~t~Lh~~~~~~~~~~~~~ivk~Li~ 207 (489)
T PHA02798 175 NTHNNKEKYDTLHCYFKYNIDRIDADILKLFVD 207 (489)
T ss_pred ccccCcCCCcHHHHHHHhccccCCHHHHHHHHH
Confidence 2 346999988754 36777777643
No 54
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=99.46 E-value=4.1e-13 Score=93.18 Aligned_cols=91 Identities=21% Similarity=0.069 Sum_probs=72.0
Q ss_pred cccccC-CCCCCcHHHHHHH--cCCHHHHHHHHHhcCcCchhhhcccccCCChHHHHHHHcCC--HHHHhhhhhhhhcc-
Q 043593 2 IQAAKI-TNSEDTALHIAVS--DGRSDIVLKLVESMGQNASNVLKLQNEKGNTALHLAAALGN--AAFVKIGCLDIQSL- 75 (103)
Q Consensus 2 a~~~~~-d~~g~t~lh~a~~--~~~~~~~~~Ll~~~~~~~~~~~~~~~~~g~tpl~~a~~~~~--~~~~~~l~~~~~~~- 75 (103)
|+.... |..|.||||.|+. .++.+++++|++.|+ +++.+|..|.||||+|+..|+ .+++++|+..++..
T Consensus 167 ADIN~~~d~~G~TpLH~A~~n~~~~~eIVklLLe~GA-----DVN~kD~~G~TPLH~Aa~~g~~~~eIVklLLe~GADVN 241 (764)
T PHA02716 167 VNLNYVCKKTGYGILHAYLGNMYVDIDILEWLCNNGV-----NVNLQNNHLITPLHTYLITGNVCASVIKKIIELGGDMD 241 (764)
T ss_pred CCcccccCCCCCcHHHHHHHhccCCHHHHHHHHHcCC-----CCCCCCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCC
Confidence 445566 8899999999865 467899999999998 899999999999999999985 48999887766554
Q ss_pred ---ccCCcHHHHHH---hcCchhhhHhh
Q 043593 76 ---NIKIKLLDIQS---LNIKFKILDIQ 97 (103)
Q Consensus 76 ---~~~~tpl~~A~---~~~~~~~~~~~ 97 (103)
..|.||||.|+ ..++.++++++
T Consensus 242 ~kD~~G~TPLh~Ai~~a~n~~~EIvkiL 269 (764)
T PHA02716 242 MKCVNGMSPIMTYIINIDNINPEITNIY 269 (764)
T ss_pred CCCCCCCCHHHHHHHhhhccCHHHHHHH
Confidence 34579999874 34555655554
No 55
>PHA02989 ankyrin repeat protein; Provisional
Probab=99.45 E-value=6.8e-13 Score=88.94 Aligned_cols=92 Identities=14% Similarity=0.065 Sum_probs=71.0
Q ss_pred cccccCCCCCCcHHHHHHHc---CCHHHHHHHHHhcCcCchhhh-cccccCCChHHHHHHHc--CCHHHHhhhhhhhhcc
Q 043593 2 IQAAKITNSEDTALHIAVSD---GRSDIVLKLVESMGQNASNVL-KLQNEKGNTALHLAAAL--GNAAFVKIGCLDIQSL 75 (103)
Q Consensus 2 a~~~~~d~~g~t~lh~a~~~---~~~~~~~~Ll~~~~~~~~~~~-~~~~~~g~tpl~~a~~~--~~~~~~~~l~~~~~~~ 75 (103)
|+.+..|.+|+||||.|+.. ++.+++++|++.|+ ++ +.+|..|.||||+++.. ++.+++++|...++..
T Consensus 99 adin~~d~~g~tpL~~a~~~~~~~~~eiv~~Ll~~Ga-----din~~~d~~g~tpLh~a~~~~~~~~~iv~~Ll~~Gadi 173 (494)
T PHA02989 99 ADINLKTFNGVSPIVCFIYNSNINNCDMLRFLLSKGI-----NVNDVKNSRGYNLLHMYLESFSVKKDVIKILLSFGVNL 173 (494)
T ss_pred CCCCCCCCCCCcHHHHHHHhcccCcHHHHHHHHHCCC-----CcccccCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCc
Confidence 45677888999999987655 67889999999987 78 78889999999988653 5788888887665443
Q ss_pred -----ccCCcHHHHHHhcC----chhhhHhhh
Q 043593 76 -----NIKIKLLDIQSLNI----KFKILDIQS 98 (103)
Q Consensus 76 -----~~~~tpl~~A~~~~----~~~~~~~~~ 98 (103)
..+.|||++|...+ +.+++++|-
T Consensus 174 ~~~~~~~g~tpL~~a~~~~~~~~~~~iv~~Ll 205 (494)
T PHA02989 174 FEKTSLYGLTPMNIYLRNDIDVISIKVIKYLI 205 (494)
T ss_pred cccccccCCChHHHHHhcccccccHHHHHHHH
Confidence 34569999887654 777777763
No 56
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.45 E-value=2e-12 Score=71.13 Aligned_cols=88 Identities=24% Similarity=0.263 Sum_probs=74.2
Q ss_pred CCCCCCcHHHHHHHcCCHHHHHHHHHhcCcCchhhhcccccCCChHHHHHHHcCCHHHHhhhhhhhhc----cccCCcHH
Q 043593 7 ITNSEDTALHIAVSDGRSDIVLKLVESMGQNASNVLKLQNEKGNTALHLAAALGNAAFVKIGCLDIQS----LNIKIKLL 82 (103)
Q Consensus 7 ~d~~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~~----~~~~~tpl 82 (103)
.|.+|.||||.|+..++.+++++|++.+. +.+..+..|.+|+++++..+..++++++...... ...+.||+
T Consensus 3 ~~~~g~t~l~~a~~~~~~~~i~~li~~~~-----~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~l 77 (126)
T cd00204 3 RDEDGRTPLHLAASNGHLEVVKLLLENGA-----DVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADVNARDKDGNTPL 77 (126)
T ss_pred cCcCCCCHHHHHHHcCcHHHHHHHHHcCC-----CCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHH
Confidence 46789999999999999999999999987 5678889999999999999999999887654422 23456999
Q ss_pred HHHHhcCchhhhHhhhh
Q 043593 83 DIQSLNIKFKILDIQSL 99 (103)
Q Consensus 83 ~~A~~~~~~~~~~~~~~ 99 (103)
|+|+..++.++++.+..
T Consensus 78 ~~a~~~~~~~~~~~L~~ 94 (126)
T cd00204 78 HLAARNGNLDVVKLLLK 94 (126)
T ss_pred HHHHHcCcHHHHHHHHH
Confidence 99999999999988854
No 57
>PHA02917 ankyrin-like protein; Provisional
Probab=99.44 E-value=1e-12 Score=90.64 Aligned_cols=90 Identities=11% Similarity=0.111 Sum_probs=73.3
Q ss_pred cccCCCCCCcHHHHHHHcC-----------------------CHHHHHHHHHhcCcCchhhhcccccCCChHHHHHHHcC
Q 043593 4 AAKITNSEDTALHIAVSDG-----------------------RSDIVLKLVESMGQNASNVLKLQNEKGNTALHLAAALG 60 (103)
Q Consensus 4 ~~~~d~~g~t~lh~a~~~~-----------------------~~~~~~~Ll~~~~~~~~~~~~~~~~~g~tpl~~a~~~~ 60 (103)
....|.+|+||||.|+..+ ..+++++|+.+|. +++.+|..|.||||+|+..+
T Consensus 389 ~~~~~~~G~TpL~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ll~~GA-----dIN~kd~~G~TpLh~Aa~~~ 463 (661)
T PHA02917 389 AVNHLDDGEIPIGHLCKSNYGCYNFYTYTYKKGLCDMSYACPILSTINICLPYLK-----DINMIDKRGETLLHKAVRYN 463 (661)
T ss_pred ccccCCCCCChhHHHHHhcccchhhhhhhhhhccchhhhhhhhHHHHHHHHHCCC-----CCCCCCCCCcCHHHHHHHcC
Confidence 3445667999999987432 3457799999998 89999999999999999999
Q ss_pred CHHHHhhhhhhhhcc----ccCCcHHHHHHh-cCchhhhHhhh
Q 043593 61 NAAFVKIGCLDIQSL----NIKIKLLDIQSL-NIKFKILDIQS 98 (103)
Q Consensus 61 ~~~~~~~l~~~~~~~----~~~~tpl~~A~~-~~~~~~~~~~~ 98 (103)
+.+++++|...++.. ..+.|||++|.. .++.++++++-
T Consensus 464 ~~~~v~~Ll~~GAdin~~d~~G~T~L~~A~~~~~~~~iv~~LL 506 (661)
T PHA02917 464 KQSLVSLLLESGSDVNIRSNNGYTCIAIAINESRNIELLKMLL 506 (661)
T ss_pred CHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHhCCCHHHHHHHH
Confidence 999999987665544 456799999996 67888888774
No 58
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.42 E-value=1.5e-12 Score=78.13 Aligned_cols=94 Identities=26% Similarity=0.304 Sum_probs=78.8
Q ss_pred cccccCCCCCCcHHHHHHHcCC-----HHHHHHHHHhcC--cCchhhhcccccCCChHHHHHHHcCCHHHHhhhhhhhhc
Q 043593 2 IQAAKITNSEDTALHIAVSDGR-----SDIVLKLVESMG--QNASNVLKLQNEKGNTALHLAAALGNAAFVKIGCLDIQS 74 (103)
Q Consensus 2 a~~~~~d~~g~t~lh~a~~~~~-----~~~~~~Ll~~~~--~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~~ 74 (103)
++....|..|.||||+|+..++ .+++++|++.+. . +.+.+|..|.||||+|+..|+.++++.++..++.
T Consensus 97 ~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~----~~~~~~~~g~tpl~~A~~~~~~~~~~~ll~~~~~ 172 (235)
T COG0666 97 ADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLD----VNNLRDEDGNTPLHWAALNGDADIVELLLEAGAD 172 (235)
T ss_pred CCcccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCC----CccccCCCCCchhHHHHHcCchHHHHHHHhcCCC
Confidence 3457889999999999999999 999999999987 4 5677799999999999999999999887765544
Q ss_pred c----ccCCcHHHHHHhcCchhhhHhhhh
Q 043593 75 L----NIKIKLLDIQSLNIKFKILDIQSL 99 (103)
Q Consensus 75 ~----~~~~tpl~~A~~~~~~~~~~~~~~ 99 (103)
. ..+.|++++|+..++.+++..+..
T Consensus 173 ~~~~~~~g~t~l~~a~~~~~~~~~~~l~~ 201 (235)
T COG0666 173 PNSRNSYGVTALDPAAKNGRIELVKLLLD 201 (235)
T ss_pred CcccccCCCcchhhhcccchHHHHHHHHh
Confidence 3 456799999999999888887754
No 59
>PHA02917 ankyrin-like protein; Provisional
Probab=99.40 E-value=2.2e-12 Score=89.02 Aligned_cols=57 Identities=16% Similarity=0.051 Sum_probs=48.8
Q ss_pred cccccCCCCCCcHHHHHHHc---CCHHHHHHHHHhcCcCchhhhcccccCCChHHHHHHHcCCHH
Q 043593 2 IQAAKITNSEDTALHIAVSD---GRSDIVLKLVESMGQNASNVLKLQNEKGNTALHLAAALGNAA 63 (103)
Q Consensus 2 a~~~~~d~~g~t~lh~a~~~---~~~~~~~~Ll~~~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~ 63 (103)
+.+...|.+|.||||+|++. |+.+++++|++.|. +++..+..|.||||+|+..|+.+
T Consensus 23 ~~~~~~d~~g~t~Lh~a~~~~~~~~~~~v~~Ll~~ga-----~v~~~~~~g~TpL~~Aa~~g~~~ 82 (661)
T PHA02917 23 DPNDTRNQFKNNALHAYLFNEHCNNVEVVKLLLDSGT-----NPLHKNWRQLTPLEEYTNSRHVK 82 (661)
T ss_pred CcccccCCCCCcHHHHHHHhhhcCcHHHHHHHHHCCC-----CccccCCCCCCHHHHHHHcCChh
Confidence 34567799999999998665 78999999999998 78899999999999999877643
No 60
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=99.39 E-value=9.4e-13 Score=87.24 Aligned_cols=90 Identities=20% Similarity=0.087 Sum_probs=74.2
Q ss_pred ccccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCcCchhhhcccccCCChHHHHHHHcCCHHHHhhhhhhhhcc-----cc
Q 043593 3 QAAKITNSEDTALHIAVSDGRSDIVLKLVESMGQNASNVLKLQNEKGNTALHLAAALGNAAFVKIGCLDIQSL-----NI 77 (103)
Q Consensus 3 ~~~~~d~~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~~~-----~~ 77 (103)
+.+..++.|.|+||-|+..||.++++||+.+|. ++|..|..|+||||.|+.-++..+++.|...++.. ..
T Consensus 575 DpSqpNdEGITaLHNAiCaghyeIVkFLi~~ga-----nVNa~DSdGWTPLHCAASCNnv~~ckqLVe~GaavfAsTlSD 649 (752)
T KOG0515|consen 575 DPSQPNDEGITALHNAICAGHYEIVKFLIEFGA-----NVNAADSDGWTPLHCAASCNNVPMCKQLVESGAAVFASTLSD 649 (752)
T ss_pred CCCCCCccchhHHhhhhhcchhHHHHHHHhcCC-----cccCccCCCCchhhhhhhcCchHHHHHHHhccceEEeeeccc
Confidence 456788999999999999999999999999998 89999999999999999999999999887655433 34
Q ss_pred CCcHHHHH--HhcCchhhhHhh
Q 043593 78 KIKLLDIQ--SLNIKFKILDIQ 97 (103)
Q Consensus 78 ~~tpl~~A--~~~~~~~~~~~~ 97 (103)
..|+..-. ...|+.+|.++|
T Consensus 650 meTa~eKCee~eeGY~~CsqyL 671 (752)
T KOG0515|consen 650 METAAEKCEEMEEGYDQCSQYL 671 (752)
T ss_pred ccchhhhcchhhhhHHHHHHHH
Confidence 45775544 346777777766
No 61
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=99.38 E-value=4.5e-13 Score=80.45 Aligned_cols=94 Identities=15% Similarity=0.088 Sum_probs=80.9
Q ss_pred cccccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCcCchhhhcccccCCChHHHHHHHcCCHHHHhhhhhhhhcc----cc
Q 043593 2 IQAAKITNSEDTALHIAVSDGRSDIVLKLVESMGQNASNVLKLQNEKGNTALHLAAALGNAAFVKIGCLDIQSL----NI 77 (103)
Q Consensus 2 a~~~~~d~~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~~~----~~ 77 (103)
|+....-+...|+|.+|++.|.+++++.|+.++. ++|..|..|.|||-+|++.++.+|++.|+..++.. +.
T Consensus 184 Adp~~lgk~resALsLAt~ggytdiV~lLL~r~v-----dVNvyDwNGgTpLlyAvrgnhvkcve~Ll~sGAd~t~e~ds 258 (296)
T KOG0502|consen 184 ADPDALGKYRESALSLATRGGYTDIVELLLTREV-----DVNVYDWNGGTPLLYAVRGNHVKCVESLLNSGADVTQEDDS 258 (296)
T ss_pred CChhhhhhhhhhhHhHHhcCChHHHHHHHHhcCC-----CcceeccCCCceeeeeecCChHHHHHHHHhcCCCccccccc
Confidence 3444555677899999999999999999999998 89999999999999999999999999988766554 45
Q ss_pred CCcHHHHHHhcCchhhhHhhhhh
Q 043593 78 KIKLLDIQSLNIKFKILDIQSLN 100 (103)
Q Consensus 78 ~~tpl~~A~~~~~~~~~~~~~~~ 100 (103)
|.+++.+|+..|+..+.++++..
T Consensus 259 Gy~~mdlAValGyr~Vqqvie~h 281 (296)
T KOG0502|consen 259 GYWIMDLAVALGYRIVQQVIEKH 281 (296)
T ss_pred CCcHHHHHHHhhhHHHHHHHHHH
Confidence 67999999999999777777654
No 62
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.36 E-value=4.1e-12 Score=73.35 Aligned_cols=68 Identities=18% Similarity=0.055 Sum_probs=58.9
Q ss_pred cccccCC-CCCCcHHHHHHHcCCHHHHHHHHHh-cCcCchhhhcccccCCChHHHHHHHcCCHHHHhhhhhhhhc
Q 043593 2 IQAAKIT-NSEDTALHIAVSDGRSDIVLKLVES-MGQNASNVLKLQNEKGNTALHLAAALGNAAFVKIGCLDIQS 74 (103)
Q Consensus 2 a~~~~~d-~~g~t~lh~a~~~~~~~~~~~Ll~~-~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~~ 74 (103)
|+....| ..|+||||+|+..++.+++++|+.. +. +++.++..|.||||+|+..++.+++++|...++.
T Consensus 82 adin~~~~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~-----d~n~~~~~g~tpL~~A~~~~~~~i~~~Ll~~ga~ 151 (154)
T PHA02736 82 ADINGKERVFGNTPLHIAVYTQNYELATWLCNQPGV-----NMEILNYAFKTPYYVACERHDAKMMNILRAKGAQ 151 (154)
T ss_pred CCccccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCC-----CCccccCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 3455666 5899999999999999999999985 65 7899999999999999999999999988766544
No 63
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.35 E-value=5.6e-12 Score=87.15 Aligned_cols=81 Identities=17% Similarity=0.073 Sum_probs=71.8
Q ss_pred HHHHHHHcCCHHHHHHHHHhcCcCchhhhcccccCCChHHHHHHHcCCHHHHhhhhhhhhcc----ccCCcHHHHHHhcC
Q 043593 14 ALHIAVSDGRSDIVLKLVESMGQNASNVLKLQNEKGNTALHLAAALGNAAFVKIGCLDIQSL----NIKIKLLDIQSLNI 89 (103)
Q Consensus 14 ~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~~~----~~~~tpl~~A~~~~ 89 (103)
.|+.|+..|+.+.++.|++.|. +++.+|..|.||||+|+..|+.+++++|+..++.. ..+.||||+|+..+
T Consensus 85 ~L~~aa~~G~~~~vk~LL~~Ga-----din~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadvn~~d~~G~TpLh~A~~~g 159 (664)
T PTZ00322 85 ELCQLAASGDAVGARILLTGGA-----DPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENG 159 (664)
T ss_pred HHHHHHHcCCHHHHHHHHHCCC-----CCCCcCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCC
Confidence 4888999999999999999997 89999999999999999999999999987665443 35579999999999
Q ss_pred chhhhHhhhh
Q 043593 90 KFKILDIQSL 99 (103)
Q Consensus 90 ~~~~~~~~~~ 99 (103)
+.+++++|-.
T Consensus 160 ~~~iv~~Ll~ 169 (664)
T PTZ00322 160 FREVVQLLSR 169 (664)
T ss_pred cHHHHHHHHh
Confidence 9999999843
No 64
>PHA02795 ankyrin-like protein; Provisional
Probab=99.33 E-value=4.9e-12 Score=83.21 Aligned_cols=69 Identities=22% Similarity=0.196 Sum_probs=61.4
Q ss_pred cccccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCcCchhhhcccccCCChHHHHHHHcCC--------HHHHhhhhhhhh
Q 043593 2 IQAAKITNSEDTALHIAVSDGRSDIVLKLVESMGQNASNVLKLQNEKGNTALHLAAALGN--------AAFVKIGCLDIQ 73 (103)
Q Consensus 2 a~~~~~d~~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~g~tpl~~a~~~~~--------~~~~~~l~~~~~ 73 (103)
|+....|..|.||||+|+..|+.+++++|++.|+ +++.+|..|.||||+|+..|+ .+++++|+..++
T Consensus 212 ADIN~kD~~G~TpLh~Aa~~g~~eiVelLL~~GA-----dIN~~d~~G~TpLh~Aa~~g~~~~~~~~~~eIvelLL~~ga 286 (437)
T PHA02795 212 EDINQLDAGGRTLLYRAIYAGYIDLVSWLLENGA-----NVNAVMSNGYTCLDVAVDRGSVIARRETHLKILEILLREPL 286 (437)
T ss_pred CCcCcCCCCCCCHHHHHHHcCCHHHHHHHHHCCC-----CCCCcCCCCCCHHHHHHHcCCcccccccHHHHHHHHHhCCC
Confidence 5678899999999999999999999999999998 899999999999999999884 689998876554
Q ss_pred cc
Q 043593 74 SL 75 (103)
Q Consensus 74 ~~ 75 (103)
..
T Consensus 287 dI 288 (437)
T PHA02795 287 SI 288 (437)
T ss_pred CC
Confidence 43
No 65
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.33 E-value=1.8e-12 Score=62.96 Aligned_cols=52 Identities=25% Similarity=0.223 Sum_probs=28.9
Q ss_pred HHHhcCcCchhhhcccccCCChHHHHHHHcCCHHHHhhhhhhhhcc----ccCCcHHHHH
Q 043593 30 LVESMGQNASNVLKLQNEKGNTALHLAAALGNAAFVKIGCLDIQSL----NIKIKLLDIQ 85 (103)
Q Consensus 30 Ll~~~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~~~----~~~~tpl~~A 85 (103)
|++.+.. +++.+|..|.||||+|+..|+.+++++|+..+... ..|+||+++|
T Consensus 1 LL~~~~~----~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~~~d~~G~Tpl~~A 56 (56)
T PF13857_consen 1 LLEHGPA----DVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGADPNAKDKDGQTPLHYA 56 (56)
T ss_dssp -----T------TT---TTS--HHHHHHHHT-HHHHHHHHHCT--TT---TTS--HHHH-
T ss_pred CCccCcC----CCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCCCCCcCCCCCHHHhC
Confidence 4555522 88999999999999999999999999987544433 5668999987
No 66
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=99.31 E-value=1.3e-12 Score=89.20 Aligned_cols=88 Identities=27% Similarity=0.218 Sum_probs=44.8
Q ss_pred ccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCcCchhhhcccccCCChHHHHHHHcCCHHHHhhhhhhh----hccccCCc
Q 043593 5 AKITNSEDTALHIAVSDGRSDIVLKLVESMGQNASNVLKLQNEKGNTALHLAAALGNAAFVKIGCLDI----QSLNIKIK 80 (103)
Q Consensus 5 ~~~d~~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~----~~~~~~~t 80 (103)
+..|.+|.|.||+|+..|+.++++.|+++-. .....|..|.+|||+|+..|+.+++++++... +....+.|
T Consensus 43 n~qd~~gfTalhha~Lng~~~is~llle~ea-----~ldl~d~kg~~plhlaaw~g~~e~vkmll~q~d~~na~~~e~~t 117 (854)
T KOG0507|consen 43 NLQDYSGFTLLHHAVLNGQNQISKLLLDYEA-----LLDLCDTKGILPLHLAAWNGNLEIVKMLLLQTDILNAVNIENET 117 (854)
T ss_pred cccCccchhHHHHHHhcCchHHHHHHhcchh-----hhhhhhccCcceEEehhhcCcchHHHHHHhcccCCCcccccCcC
Confidence 3445555555555555555555555555554 34445555555555555555555555433211 11123345
Q ss_pred HHHHHHhcCchhhhHhh
Q 043593 81 LLDIQSLNIKFKILDIQ 97 (103)
Q Consensus 81 pl~~A~~~~~~~~~~~~ 97 (103)
|||.|+..|+.+++.+|
T Consensus 118 plhlaaqhgh~dvv~~L 134 (854)
T KOG0507|consen 118 PLHLAAQHGHLEVVFYL 134 (854)
T ss_pred ccchhhhhcchHHHHHH
Confidence 55555555555555554
No 67
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.31 E-value=4.1e-12 Score=79.25 Aligned_cols=90 Identities=28% Similarity=0.324 Sum_probs=71.9
Q ss_pred ccccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCcCchhhhcccccCCChHHHHHHHcCCHHHHhhhhhhhhcc----ccC
Q 043593 3 QAAKITNSEDTALHIAVSDGRSDIVLKLVESMGQNASNVLKLQNEKGNTALHLAAALGNAAFVKIGCLDIQSL----NIK 78 (103)
Q Consensus 3 ~~~~~d~~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~~~----~~~ 78 (103)
-++..+....||||+|+.+||.++++.|+++.. +++..+..|.|||||||.-|.-.+++-|...++.. .+|
T Consensus 59 rvn~tnmgddtplhlaaahghrdivqkll~~ka-----dvnavnehgntplhyacfwgydqiaedli~~ga~v~icnk~g 133 (448)
T KOG0195|consen 59 RVNSTNMGDDTPLHLAAAHGHRDIVQKLLSRKA-----DVNAVNEHGNTPLHYACFWGYDQIAEDLISCGAAVNICNKKG 133 (448)
T ss_pred ccccccCCCCcchhhhhhcccHHHHHHHHHHhc-----ccchhhccCCCchhhhhhhcHHHHHHHHHhccceeeecccCC
Confidence 356677778999999999999999999999998 89999999999999999999988888776655544 345
Q ss_pred CcHHHHHHhcCchhhhHhh
Q 043593 79 IKLLDIQSLNIKFKILDIQ 97 (103)
Q Consensus 79 ~tpl~~A~~~~~~~~~~~~ 97 (103)
.||+..|...-...+.++.
T Consensus 134 ~tpldkakp~l~~~l~e~a 152 (448)
T KOG0195|consen 134 MTPLDKAKPMLKNTLLEIA 152 (448)
T ss_pred CCchhhhchHHHHHHHHHH
Confidence 6898887543333444443
No 68
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=99.31 E-value=1.7e-12 Score=88.64 Aligned_cols=89 Identities=25% Similarity=0.216 Sum_probs=79.9
Q ss_pred cccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCcCchhhhcccccCCChHHHHHHHcCCHHHHhhhhhhhhcc----ccCC
Q 043593 4 AAKITNSEDTALHIAVSDGRSDIVLKLVESMGQNASNVLKLQNEKGNTALHLAAALGNAAFVKIGCLDIQSL----NIKI 79 (103)
Q Consensus 4 ~~~~d~~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~~~----~~~~ 79 (103)
.+..|..|.+|||+|+|.|+.++++.++..+. ..+.+...|.||||.++++|+.+.+.+|+..++.. +.+.
T Consensus 75 ldl~d~kg~~plhlaaw~g~~e~vkmll~q~d-----~~na~~~e~~tplhlaaqhgh~dvv~~Ll~~~adp~i~nns~~ 149 (854)
T KOG0507|consen 75 LDLCDTKGILPLHLAAWNGNLEIVKMLLLQTD-----ILNAVNIENETPLHLAAQHGHLEVVFYLLKKNADPFIRNNSKE 149 (854)
T ss_pred hhhhhccCcceEEehhhcCcchHHHHHHhccc-----CCCcccccCcCccchhhhhcchHHHHHHHhcCCCccccCcccc
Confidence 45567899999999999999999999999985 78999999999999999999999999998776655 3446
Q ss_pred cHHHHHHhcCchhhhHhh
Q 043593 80 KLLDIQSLNIKFKILDIQ 97 (103)
Q Consensus 80 tpl~~A~~~~~~~~~~~~ 97 (103)
|++.+|+.-|..++++++
T Consensus 150 t~ldlA~qfgr~~Vvq~l 167 (854)
T KOG0507|consen 150 TVLDLASRFGRAEVVQML 167 (854)
T ss_pred cHHHHHHHhhhhHHHHHH
Confidence 999999999999999987
No 69
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.29 E-value=7.9e-11 Score=64.72 Aligned_cols=88 Identities=27% Similarity=0.303 Sum_probs=75.3
Q ss_pred ccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCcCchhhhcccccCCChHHHHHHHcCCHHHHhhhhhhh----hccccCCc
Q 043593 5 AKITNSEDTALHIAVSDGRSDIVLKLVESMGQNASNVLKLQNEKGNTALHLAAALGNAAFVKIGCLDI----QSLNIKIK 80 (103)
Q Consensus 5 ~~~d~~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~----~~~~~~~t 80 (103)
...|..|.||+|.|+..+..+++++|++.+. .++..+..+.+|+|+|+..++.++++++.... .....+.|
T Consensus 34 ~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~-----~~~~~~~~~~~~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~ 108 (126)
T cd00204 34 NAKDNDGRTPLHLAAKNGHLEIVKLLLEKGA-----DVNARDKDGNTPLHLAARNGNLDVVKLLLKHGADVNARDKDGRT 108 (126)
T ss_pred CccCCCCCcHHHHHHHcCCHHHHHHHHHcCC-----CccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCC
Confidence 4568899999999999999999999999986 67778889999999999999999999987643 23345579
Q ss_pred HHHHHHhcCchhhhHhh
Q 043593 81 LLDIQSLNIKFKILDIQ 97 (103)
Q Consensus 81 pl~~A~~~~~~~~~~~~ 97 (103)
|+++|...++.++++++
T Consensus 109 ~l~~~~~~~~~~~~~~L 125 (126)
T cd00204 109 PLHLAAKNGHLEVVKLL 125 (126)
T ss_pred HHHHHHhcCCHHHHHHh
Confidence 99999999888888765
No 70
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.29 E-value=1.7e-11 Score=71.39 Aligned_cols=81 Identities=21% Similarity=0.110 Sum_probs=69.8
Q ss_pred cHHHHHHHcCCHHHHHHHHHhcCcCchhhhcccccCCChHHHHHHHcCCHHHHhhhhhhh----hccccCCcHHHHHHhc
Q 043593 13 TALHIAVSDGRSDIVLKLVESMGQNASNVLKLQNEKGNTALHLAAALGNAAFVKIGCLDI----QSLNIKIKLLDIQSLN 88 (103)
Q Consensus 13 t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~----~~~~~~~tpl~~A~~~ 88 (103)
.-+.+|+..++...++.|++..+. .++.+|..|.||||-|+..|+.+++..++..+ +..+.|+||||.|+..
T Consensus 65 rl~lwaae~nrl~eV~~lL~e~an----~vNtrD~D~YTpLHRAaYn~h~div~~ll~~gAn~~a~T~~GWTPLhSAckW 140 (228)
T KOG0512|consen 65 RLLLWAAEKNRLTEVQRLLSEKAN----HVNTRDEDEYTPLHRAAYNGHLDIVHELLLSGANKEAKTNEGWTPLHSACKW 140 (228)
T ss_pred HHHHHHHhhccHHHHHHHHHhccc----cccccccccccHHHHHHhcCchHHHHHHHHccCCcccccccCccchhhhhcc
Confidence 346788999999999999988764 79999999999999999999999998766443 4446789999999999
Q ss_pred CchhhhHhh
Q 043593 89 IKFKILDIQ 97 (103)
Q Consensus 89 ~~~~~~~~~ 97 (103)
.+.+|..+|
T Consensus 141 nN~~va~~L 149 (228)
T KOG0512|consen 141 NNFEVAGRL 149 (228)
T ss_pred cchhHHHHH
Confidence 999998876
No 71
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.27 E-value=1.9e-11 Score=85.49 Aligned_cols=77 Identities=25% Similarity=0.263 Sum_probs=64.4
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHhcCcCchhhhcccc--------------cCCChHHHHHHHcCCHHHHhhhhhhhh
Q 043593 8 TNSEDTALHIAVSDGRSDIVLKLVESMGQNASNVLKLQN--------------EKGNTALHLAAALGNAAFVKIGCLDIQ 73 (103)
Q Consensus 8 d~~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~--------------~~g~tpl~~a~~~~~~~~~~~l~~~~~ 73 (103)
+..|.||||+|+..|+.++++.|++.|+ +++.++ ..|.+|||+|+..++.++++++...++
T Consensus 125 ~~~G~TpLhlAa~~~~~eiVklLL~~GA-----dv~~~~~~~~~~~~~~~~~~~~g~tpL~~Aa~~~~~~iv~lLl~~ga 199 (743)
T TIGR00870 125 FTPGITALHLAAHRQNYEIVKLLLERGA-----SVPARACGDFFVKSQGVDSFYHGESPLNAAACLGSPSIVALLSEDPA 199 (743)
T ss_pred cCCCCcHHHHHHHhCCHHHHHHHHhCCC-----CCCcCcCCchhhcCCCCCcccccccHHHHHHHhCCHHHHHHHhcCCc
Confidence 3569999999999999999999999997 565432 358999999999999999999876553
Q ss_pred c----cccCCcHHHHHHhcC
Q 043593 74 S----LNIKIKLLDIQSLNI 89 (103)
Q Consensus 74 ~----~~~~~tpl~~A~~~~ 89 (103)
. ...++||||+|+..+
T Consensus 200 din~~d~~g~T~Lh~A~~~~ 219 (743)
T TIGR00870 200 DILTADSLGNTLLHLLVMEN 219 (743)
T ss_pred chhhHhhhhhHHHHHHHhhh
Confidence 3 345689999999876
No 72
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=99.26 E-value=1.6e-11 Score=87.66 Aligned_cols=87 Identities=21% Similarity=0.231 Sum_probs=67.5
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHHhcCcCchhhhcccccCCChHHHHHHHcCCHHHHhhhhhhhhcc----ccCCcHHHH
Q 043593 9 NSEDTALHIAVSDGRSDIVLKLVESMGQNASNVLKLQNEKGNTALHLAAALGNAAFVKIGCLDIQSL----NIKIKLLDI 84 (103)
Q Consensus 9 ~~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~~~----~~~~tpl~~ 84 (103)
..|.+++|.+...++..+++.++++|. +++.++..|.||||+|+..|+..+|++|+..++.. +.|.||||.
T Consensus 505 ~~~l~~lhla~~~~~v~~~~~l~~~ga-----~v~~~~~r~~TpLh~A~~~g~v~~VkfLLe~gAdv~ak~~~G~TPLH~ 579 (1143)
T KOG4177|consen 505 KKGLTPLHLAADEDTVKVAKILLEHGA-----NVDLRTGRGYTPLHVAVHYGNVDLVKFLLEHGADVNAKDKLGYTPLHQ 579 (1143)
T ss_pred hhccchhhhhhhhhhHHHHHHHhhcCC-----ceehhcccccchHHHHHhcCCchHHHHhhhCCccccccCCCCCChhhH
Confidence 344555555555555555666666665 67778888999999999999999999988765443 566799999
Q ss_pred HHhcCchhhhHhhhhh
Q 043593 85 QSLNIKFKILDIQSLN 100 (103)
Q Consensus 85 A~~~~~~~~~~~~~~~ 100 (103)
|+..|+.+|+.+|-.+
T Consensus 580 Aa~~G~~~i~~LLlk~ 595 (1143)
T KOG4177|consen 580 AAQQGHNDIAELLLKH 595 (1143)
T ss_pred HHHcChHHHHHHHHHc
Confidence 9999999999998554
No 73
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.24 E-value=2.8e-11 Score=58.31 Aligned_cols=49 Identities=27% Similarity=0.175 Sum_probs=37.5
Q ss_pred CChHHHHHHHcCCHHHHhhhhhhhhc----cccCCcHHHHHHhcCchhhhHhh
Q 043593 49 GNTALHLAAALGNAAFVKIGCLDIQS----LNIKIKLLDIQSLNIKFKILDIQ 97 (103)
Q Consensus 49 g~tpl~~a~~~~~~~~~~~l~~~~~~----~~~~~tpl~~A~~~~~~~~~~~~ 97 (103)
|.||+|+|+..|+.++++++...+.. ...|.||||+|+..|+.+++++|
T Consensus 1 g~t~lh~A~~~g~~~~~~~Ll~~~~din~~d~~g~t~lh~A~~~g~~~~~~~L 53 (54)
T PF13637_consen 1 GRTPLHWAARSGNLEIVKLLLEHGADINAQDEDGRTPLHYAAKNGNIDIVKFL 53 (54)
T ss_dssp SSBHHHHHHHTT-HHHHHHHHHTTSGTT-B-TTS--HHHHHHHTT-HHHHHHH
T ss_pred CChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHccCHHHHHHH
Confidence 67999999999999999997654333 35567999999999999999886
No 74
>PHA02730 ankyrin-like protein; Provisional
Probab=99.23 E-value=6.3e-11 Score=81.44 Aligned_cols=96 Identities=15% Similarity=0.030 Sum_probs=76.8
Q ss_pred cccccCCCCCCcHHHHHHHcC--CHHHHHHHHHhcCcCchhhhcccccCCChHHHHHHH--cCCHHHHhhhhh-hhhc--
Q 043593 2 IQAAKITNSEDTALHIAVSDG--RSDIVLKLVESMGQNASNVLKLQNEKGNTALHLAAA--LGNAAFVKIGCL-DIQS-- 74 (103)
Q Consensus 2 a~~~~~d~~g~t~lh~a~~~~--~~~~~~~Ll~~~~~~~~~~~~~~~~~g~tpl~~a~~--~~~~~~~~~l~~-~~~~-- 74 (103)
|+....|.+|+||||.|+..+ +.+++++|++.|.. + +++..+..+.+|++.++. .++.+++++|.. .+..
T Consensus 68 Adin~kD~~G~TPLh~Aa~~~~~~~eIv~~Ll~~~~~-~--~~~~~~~~~d~~l~~y~~s~n~~~~~vk~Li~~~~~~~~ 144 (672)
T PHA02730 68 VERLCRNNEGLTPLGVYSKRKYVKSQIVHLLISSYSN-A--SNELTSNINDFDLYSYMSSDNIDLRLLKYLIVDKRIRPS 144 (672)
T ss_pred CCCcccCCCCCChHHHHHHcCCCcHHHHHHHHhcCCC-C--CcccccccCCchHHHHHHhcCCcHHHHHHHHHhcCCChh
Confidence 667889999999999999976 79999999999751 0 346677778899988887 899999999874 2211
Q ss_pred -c------ccCCcHHHHHHhcCchhhhHhhhhh
Q 043593 75 -L------NIKIKLLDIQSLNIKFKILDIQSLN 100 (103)
Q Consensus 75 -~------~~~~tpl~~A~~~~~~~~~~~~~~~ 100 (103)
. ..+-+|+.++...++.+++++|-.+
T Consensus 145 ~~~~~~~~~~~~~~~yl~~~~~~~eIvklLi~~ 177 (672)
T PHA02730 145 KNTNYYIHCLGLVDIYVTTPNPRPEVLLWLLKS 177 (672)
T ss_pred hhhhhhccccchhhhhHhcCCCchHHHHHHHHc
Confidence 1 1345999999999999999999654
No 75
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.21 E-value=4.8e-11 Score=82.60 Aligned_cols=65 Identities=26% Similarity=0.271 Sum_probs=60.1
Q ss_pred cccccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCcCchhhhcccccCCChHHHHHHHcCCHHHHhhhhhh
Q 043593 2 IQAAKITNSEDTALHIAVSDGRSDIVLKLVESMGQNASNVLKLQNEKGNTALHLAAALGNAAFVKIGCLD 71 (103)
Q Consensus 2 a~~~~~d~~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~ 71 (103)
|+.+..|..|+||||+|+..|+.+++++|++.|. +++.+|..|.||||+|+..++.+++++|+..
T Consensus 106 adin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Ga-----dvn~~d~~G~TpLh~A~~~g~~~iv~~Ll~~ 170 (664)
T PTZ00322 106 ADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGA-----DPTLLDKDGKTPLELAEENGFREVVQLLSRH 170 (664)
T ss_pred CCCCCcCCCCCcHHHHHHHCCCHHHHHHHHHCCC-----CCCCCCCCCCCHHHHHHHCCcHHHHHHHHhC
Confidence 4567789999999999999999999999999998 8999999999999999999999999988654
No 76
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.18 E-value=3.6e-10 Score=67.73 Aligned_cols=89 Identities=27% Similarity=0.204 Sum_probs=76.8
Q ss_pred ccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCcCchhhhcccccCCChHHHHHHHcCC-----HHHHhhhhhhhh---c--
Q 043593 5 AKITNSEDTALHIAVSDGRSDIVLKLVESMGQNASNVLKLQNEKGNTALHLAAALGN-----AAFVKIGCLDIQ---S-- 74 (103)
Q Consensus 5 ~~~d~~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~g~tpl~~a~~~~~-----~~~~~~l~~~~~---~-- 74 (103)
...+..+.++++.++..+...++.+++..+. +++.++..|.||+|+++..++ .++++.++..+. .
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-----~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~ 141 (235)
T COG0666 67 AARDLDGRLPLHSAASKGDDKIVKLLLASGA-----DVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNN 141 (235)
T ss_pred ccCCccccCHHHHHHHcCcHHHHHHHHHcCC-----CcccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCcc
Confidence 4456678999999999999999999999998 789999999999999999999 999998876666 2
Q ss_pred --cccCCcHHHHHHhcCchhhhHhhh
Q 043593 75 --LNIKIKLLDIQSLNIKFKILDIQS 98 (103)
Q Consensus 75 --~~~~~tpl~~A~~~~~~~~~~~~~ 98 (103)
...+.||||+|+..|+.++++++-
T Consensus 142 ~~~~~g~tpl~~A~~~~~~~~~~~ll 167 (235)
T COG0666 142 LRDEDGNTPLHWAALNGDADIVELLL 167 (235)
T ss_pred ccCCCCCchhHHHHHcCchHHHHHHH
Confidence 234579999999999998888773
No 77
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.18 E-value=4.8e-11 Score=83.45 Aligned_cols=84 Identities=17% Similarity=0.188 Sum_probs=67.9
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHHhcCcCchhhhcccccCCChHHHHHHHcC---------CHHHHhhhhhhhh------
Q 043593 9 NSEDTALHIAVSDGRSDIVLKLVESMGQNASNVLKLQNEKGNTALHLAAALG---------NAAFVKIGCLDIQ------ 73 (103)
Q Consensus 9 ~~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~g~tpl~~a~~~~---------~~~~~~~l~~~~~------ 73 (103)
..|.||||.|+..++.+++++|++.++ +++.+|..|+||||+|+..+ ...+.+++.....
T Consensus 173 ~~g~tpL~~Aa~~~~~~iv~lLl~~ga-----din~~d~~g~T~Lh~A~~~~~~~~~~~~l~~~~~~~l~~ll~~~~~~~ 247 (743)
T TIGR00870 173 YHGESPLNAAACLGSPSIVALLSEDPA-----DILTADSLGNTLLHLLVMENEFKAEYEELSCQMYNFALSLLDKLRDSK 247 (743)
T ss_pred cccccHHHHHHHhCCHHHHHHHhcCCc-----chhhHhhhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCChH
Confidence 368999999999999999999999998 89999999999999999876 2233444332211
Q ss_pred -----ccccCCcHHHHHHhcCchhhhHhh
Q 043593 74 -----SLNIKIKLLDIQSLNIKFKILDIQ 97 (103)
Q Consensus 74 -----~~~~~~tpl~~A~~~~~~~~~~~~ 97 (103)
....|.|||++|+..|+.++++++
T Consensus 248 el~~i~N~~g~TPL~~A~~~g~~~l~~lL 276 (743)
T TIGR00870 248 ELEVILNHQGLTPLKLAAKEGRIVLFRLK 276 (743)
T ss_pred hhhhhcCCCCCCchhhhhhcCCccHHHHH
Confidence 234567999999999999999877
No 78
>PHA02792 ankyrin-like protein; Provisional
Probab=99.13 E-value=4.5e-10 Score=76.78 Aligned_cols=81 Identities=11% Similarity=0.014 Sum_probs=61.8
Q ss_pred cccccCCCCC--CcHHHHHHHcCCHH---HHHHHHHhcCcCchhhhcccccCCChHHHHHHHcCCHHHHhhhhhhhhcc-
Q 043593 2 IQAAKITNSE--DTALHIAVSDGRSD---IVLKLVESMGQNASNVLKLQNEKGNTALHLAAALGNAAFVKIGCLDIQSL- 75 (103)
Q Consensus 2 a~~~~~d~~g--~t~lh~a~~~~~~~---~~~~Ll~~~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~~~- 75 (103)
|+....|.+| .||||.|+.....+ ++++|+++|+ +++.+|..|.||||+|+..++.+++++|...++..
T Consensus 363 ADIN~kD~~g~~~TpLh~A~~n~~~~v~~IlklLIs~GA-----DIN~kD~~G~TPLh~Aa~~~n~eivelLLs~GADIN 437 (631)
T PHA02792 363 NVVVEDDDNIINIMPLFPTLSIHESDVLSILKLCKPYID-----DINKIDKHGRSILYYCIESHSVSLVEWLIDNGADIN 437 (631)
T ss_pred CchhhhcCCCCChhHHHHHHHhccHhHHHHHHHHHhcCC-----ccccccccCcchHHHHHHcCCHHHHHHHHHCCCCCC
Confidence 3455566664 58898877665543 5778888887 88899999999999999999999999887665544
Q ss_pred ---ccCCcHHHHHHh
Q 043593 76 ---NIKIKLLDIQSL 87 (103)
Q Consensus 76 ---~~~~tpl~~A~~ 87 (103)
..|.|||++|..
T Consensus 438 ~kD~~G~TpL~~A~~ 452 (631)
T PHA02792 438 ITTKYGSTCIGICVI 452 (631)
T ss_pred CcCCCCCCHHHHHHH
Confidence 345799999865
No 79
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=99.12 E-value=3.1e-10 Score=59.85 Aligned_cols=80 Identities=18% Similarity=0.079 Sum_probs=67.1
Q ss_pred cHHHHHHHcCCHHHHHHHHHhcCcCchhhhcccccCCChHHHHHHHcCCHHHHhhhhhhhhccc----cCCcHHHHHHhc
Q 043593 13 TALHIAVSDGRSDIVLKLVESMGQNASNVLKLQNEKGNTALHLAAALGNAAFVKIGCLDIQSLN----IKIKLLDIQSLN 88 (103)
Q Consensus 13 t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~~~~----~~~tpl~~A~~~ 88 (103)
-.+.++...|.++.++.....+. +++... .|.+|||+|+-.|+.++++++...++..+ ++-|||-.|++.
T Consensus 4 ~~~~W~vkNG~~DeVk~~v~~g~-----nVn~~~-ggR~plhyAAD~GQl~ilefli~iGA~i~~kDKygITPLLsAvwE 77 (117)
T KOG4214|consen 4 MSVAWNVKNGEIDEVKQSVNEGL-----NVNEIY-GGRTPLHYAADYGQLSILEFLISIGANIQDKDKYGITPLLSAVWE 77 (117)
T ss_pred hhHhhhhccCcHHHHHHHHHccc-----cHHHHh-CCcccchHhhhcchHHHHHHHHHhccccCCccccCCcHHHHHHHH
Confidence 34678888999999999888885 666554 88999999999999999999877665553 445999999999
Q ss_pred CchhhhHhhh
Q 043593 89 IKFKILDIQS 98 (103)
Q Consensus 89 ~~~~~~~~~~ 98 (103)
||.+++++|=
T Consensus 78 GH~~cVklLL 87 (117)
T KOG4214|consen 78 GHRDCVKLLL 87 (117)
T ss_pred hhHHHHHHHH
Confidence 9999999983
No 80
>PF13606 Ank_3: Ankyrin repeat
Probab=99.10 E-value=1.6e-10 Score=49.07 Aligned_cols=26 Identities=38% Similarity=0.539 Sum_probs=24.6
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHhcC
Q 043593 10 SEDTALHIAVSDGRSDIVLKLVESMG 35 (103)
Q Consensus 10 ~g~t~lh~a~~~~~~~~~~~Ll~~~~ 35 (103)
+|+||||+||..|+.+++++|++.|+
T Consensus 1 ~G~T~Lh~A~~~g~~e~v~~Ll~~ga 26 (30)
T PF13606_consen 1 NGNTPLHLAASNGNIEIVKYLLEHGA 26 (30)
T ss_pred CCCCHHHHHHHhCCHHHHHHHHHcCC
Confidence 58999999999999999999999987
No 81
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=99.08 E-value=2.9e-10 Score=49.31 Aligned_cols=32 Identities=28% Similarity=0.406 Sum_probs=29.0
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHhcCcCchhhhcccc
Q 043593 10 SEDTALHIAVSDGRSDIVLKLVESMGQNASNVLKLQN 46 (103)
Q Consensus 10 ~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~ 46 (103)
+|.||||+|+..|+.+++++|++.|+ +++.+|
T Consensus 1 dG~TpLh~A~~~~~~~~v~~Ll~~ga-----~~~~~d 32 (33)
T PF00023_consen 1 DGNTPLHYAAQRGHPDIVKLLLKHGA-----DINARD 32 (33)
T ss_dssp TSBBHHHHHHHTTCHHHHHHHHHTTS-----CTTCBC
T ss_pred CcccHHHHHHHHHHHHHHHHHHHCcC-----CCCCCC
Confidence 58999999999999999999999998 777765
No 82
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=99.07 E-value=5.1e-10 Score=74.60 Aligned_cols=80 Identities=20% Similarity=0.074 Sum_probs=69.2
Q ss_pred HHHHHHcCCHHHHHHHHHhcCcCchhhhcccccCCChHHHHHHHcCCHHHHhhhhhhhhc----cccCCcHHHHHHhcCc
Q 043593 15 LHIAVSDGRSDIVLKLVESMGQNASNVLKLQNEKGNTALHLAAALGNAAFVKIGCLDIQS----LNIKIKLLDIQSLNIK 90 (103)
Q Consensus 15 lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~~----~~~~~tpl~~A~~~~~ 90 (103)
|.-|+..|..++++..+.... |+...+..|.|+||-|++.||.++|++|...++. +..|+||||+|+..++
T Consensus 554 LLDaaLeGEldlVq~~i~ev~-----DpSqpNdEGITaLHNAiCaghyeIVkFLi~~ganVNa~DSdGWTPLHCAASCNn 628 (752)
T KOG0515|consen 554 LLDAALEGELDLVQRIIYEVT-----DPSQPNDEGITALHNAICAGHYEIVKFLIEFGANVNAADSDGWTPLHCAASCNN 628 (752)
T ss_pred HHhhhhcchHHHHHHHHHhhc-----CCCCCCccchhHHhhhhhcchhHHHHHHHhcCCcccCccCCCCchhhhhhhcCc
Confidence 455888999999999998887 8999999999999999999999999998866544 4567899999999999
Q ss_pred hhhhHhhhh
Q 043593 91 FKILDIQSL 99 (103)
Q Consensus 91 ~~~~~~~~~ 99 (103)
.-+...|..
T Consensus 629 v~~ckqLVe 637 (752)
T KOG0515|consen 629 VPMCKQLVE 637 (752)
T ss_pred hHHHHHHHh
Confidence 888887754
No 83
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=99.04 E-value=3e-10 Score=75.26 Aligned_cols=79 Identities=27% Similarity=0.170 Sum_probs=66.0
Q ss_pred cccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCcCchhhhcccccCCChHHHHHHHcCCHHHHhhhhhhhhcc----ccCC
Q 043593 4 AAKITNSEDTALHIAVSDGRSDIVLKLVESMGQNASNVLKLQNEKGNTALHLAAALGNAAFVKIGCLDIQSL----NIKI 79 (103)
Q Consensus 4 ~~~~d~~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~~~----~~~~ 79 (103)
.+..+.+|.|+||.+|...+.+++.+|++++. +++.+|..|+||+|.|+.-|+..++++++..++.. ..+.
T Consensus 66 ~~~~n~DglTalhq~~id~~~e~v~~l~e~ga-----~Vn~~d~e~wtPlhaaascg~~~i~~~li~~gA~~~avNsdg~ 140 (527)
T KOG0505|consen 66 PNLCNVDGLTALHQACIDDNLEMVKFLVENGA-----NVNAQDNEGWTPLHAAASCGYLNIVEYLIQHGANLLAVNSDGN 140 (527)
T ss_pred ccccCCccchhHHHHHhcccHHHHHHHHHhcC-----CccccccccCCcchhhcccccHHHHHHHHHhhhhhhhccCCCC
Confidence 35678899999999999999999999999998 89999999999999999999999999977554433 3445
Q ss_pred cHHHHHHh
Q 043593 80 KLLDIQSL 87 (103)
Q Consensus 80 tpl~~A~~ 87 (103)
.|+.++.-
T Consensus 141 ~P~dl~e~ 148 (527)
T KOG0505|consen 141 MPYDLAED 148 (527)
T ss_pred CccccccC
Confidence 55555543
No 84
>PHA02792 ankyrin-like protein; Provisional
Probab=99.03 E-value=6e-10 Score=76.20 Aligned_cols=98 Identities=13% Similarity=0.051 Sum_probs=69.0
Q ss_pred cccccCCCCCCcHHHHHHH-cCCHHHHHHHHHhcCcCch--h-----------------------------hhcccccCC
Q 043593 2 IQAAKITNSEDTALHIAVS-DGRSDIVLKLVESMGQNAS--N-----------------------------VLKLQNEKG 49 (103)
Q Consensus 2 a~~~~~d~~g~t~lh~a~~-~~~~~~~~~Ll~~~~~~~~--~-----------------------------~~~~~~~~g 49 (103)
|+++..+..|.+|+|+|+. .++.+++++|++.|+.... . .++..|..|
T Consensus 96 AdvN~~~n~~~~~l~ya~~~~~~~eivk~Ll~~Gad~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g 175 (631)
T PHA02792 96 LEINSIKNGINIVEKYATTSNPNVDVFKLLLDKGIPTCSNIQYGYKIIIEQITRAEYYNWDDELDDYDYDYTTDYDDRMG 175 (631)
T ss_pred CCcccccCCCCcceeEeecCCCChHHHHHHHHCCCCcccccccCcchhhhhcccccccchhhhccccccccccccCCCCC
Confidence 6677778888888888865 5888888888888852000 0 012334558
Q ss_pred ChHHHHHHHcC-------CHHHHhhhhhhhhcc----ccCCcHHHHHHhcC--chhhhHhhhh
Q 043593 50 NTALHLAAALG-------NAAFVKIGCLDIQSL----NIKIKLLDIQSLNI--KFKILDIQSL 99 (103)
Q Consensus 50 ~tpl~~a~~~~-------~~~~~~~l~~~~~~~----~~~~tpl~~A~~~~--~~~~~~~~~~ 99 (103)
.||||+++..+ +.+++++|...++.. ..|.||||+|+... +.+++++|-.
T Consensus 176 ~t~L~~~i~~~s~~~~~~~~~v~k~Li~~g~~~~~~d~~g~t~l~~~~~~~~i~~ei~~~L~~ 238 (631)
T PHA02792 176 KTVLYYYIITRSQDGYATSLDVINYLISHEKEMRYYTYREHTTLYYYVDKCDIKREIFDALFD 238 (631)
T ss_pred CchHHHHHhhCCcccccCCHHHHHHHHhCCCCcCccCCCCChHHHHHHHcccchHHHHHHHHh
Confidence 88888888887 788888887766544 23468888888877 7777777743
No 85
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=99.00 E-value=5.3e-10 Score=73.61 Aligned_cols=91 Identities=18% Similarity=0.064 Sum_probs=75.4
Q ss_pred cccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCcCchhhhcccccCCChHHHHHHHcCCHHHHhhhhh-----hhhccccC
Q 043593 4 AAKITNSEDTALHIAVSDGRSDIVLKLVESMGQNASNVLKLQNEKGNTALHLAAALGNAAFVKIGCL-----DIQSLNIK 78 (103)
Q Consensus 4 ~~~~d~~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~-----~~~~~~~~ 78 (103)
.+..+.++.-++.+|+..|....++.+.-.+. +++..|+...|+||+|+..|+.+++++++. ......|+
T Consensus 499 ~~~~~~~~~i~~~~aa~~GD~~alrRf~l~g~-----D~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kDRw~ 573 (622)
T KOG0506|consen 499 GGPRENDTVINVMYAAKNGDLSALRRFALQGM-----DLETKDYDDRTALHVAAAEGHVEVVKFLLNACKVDPDPKDRWG 573 (622)
T ss_pred cCcccccchhhhhhhhhcCCHHHHHHHHHhcc-----cccccccccchhheeecccCceeHHHHHHHHHcCCCChhhccC
Confidence 34456667778899999999998887777776 899999999999999999999999998754 33445688
Q ss_pred CcHHHHHHhcCchhhhHhhhh
Q 043593 79 IKLLDIQSLNIKFKILDIQSL 99 (103)
Q Consensus 79 ~tpl~~A~~~~~~~~~~~~~~ 99 (103)
+|||+-|..-+|.+++++|+.
T Consensus 574 rtPlDdA~~F~h~~v~k~L~~ 594 (622)
T KOG0506|consen 574 RTPLDDAKHFKHKEVVKLLEE 594 (622)
T ss_pred CCcchHhHhcCcHHHHHHHHH
Confidence 899999999999999999864
No 86
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=98.99 E-value=8.2e-10 Score=73.22 Aligned_cols=79 Identities=20% Similarity=0.254 Sum_probs=68.9
Q ss_pred cccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCcCchhhhcccccCCChHHHHHHHcCCHHHHhhhhhhhhccc----cCC
Q 043593 4 AAKITNSEDTALHIAVSDGRSDIVLKLVESMGQNASNVLKLQNEKGNTALHLAAALGNAAFVKIGCLDIQSLN----IKI 79 (103)
Q Consensus 4 ~~~~d~~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~~~~----~~~ 79 (103)
.+..+..|.|.||.|+..|..++.++|+..|. .++.+|..|++|||.|+.-|+.+.+++|+...+..+ .+.
T Consensus 191 ~d~~~~rG~T~lHvAaa~Gy~e~~~lLl~ag~-----~~~~~D~dgWtPlHAAA~Wg~~~~~elL~~~ga~~d~~t~~g~ 265 (527)
T KOG0505|consen 191 LDARHARGATALHVAAANGYTEVAALLLQAGY-----SVNIKDYDGWTPLHAAAHWGQEDACELLVEHGADMDAKTKMGE 265 (527)
T ss_pred ccccccccchHHHHHHhhhHHHHHHHHHHhcc-----CcccccccCCCcccHHHHhhhHhHHHHHHHhhcccchhhhcCC
Confidence 45667779999999999999999999999998 899999999999999999999999998877666553 456
Q ss_pred cHHHHHHh
Q 043593 80 KLLDIQSL 87 (103)
Q Consensus 80 tpl~~A~~ 87 (103)
||+.++..
T Consensus 266 ~p~dv~de 273 (527)
T KOG0505|consen 266 TPLDVADE 273 (527)
T ss_pred CCccchhh
Confidence 99888864
No 87
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=98.94 E-value=6.8e-09 Score=64.95 Aligned_cols=83 Identities=18% Similarity=0.172 Sum_probs=74.0
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHhcCcCchhhhcccccCCChHHHHHHHcCCHHHHhhhhhhhhccccCC-----cHHHH
Q 043593 10 SEDTALHIAVSDGRSDIVLKLVESMGQNASNVLKLQNEKGNTALHLAAALGNAAFVKIGCLDIQSLNIKI-----KLLDI 84 (103)
Q Consensus 10 ~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~~~~~~~-----tpl~~ 84 (103)
+-..||..+.-.+..+....|++... .++..|..|+++|..|+..|+.++++.+++.++..+..+ |||++
T Consensus 11 ~~~~~Lle~i~Kndt~~a~~LLs~vr-----~vn~~D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~qhg~~YTpLmF 85 (396)
T KOG1710|consen 11 APKSPLLEAIDKNDTEAALALLSTVR-----QVNQRDPSGMSVLAHAAYKGNLTLVELLLELGADVNDKQHGTLYTPLMF 85 (396)
T ss_pred chhhHHHHHHccCcHHHHHHHHHHhh-----hhhccCCCcccHHHHHHhcCcHHHHHHHHHhCCCcCcccccccccHHHH
Confidence 34678999999999999999998876 799999999999999999999999999998888876553 99999
Q ss_pred HHhcCchhhhHhh
Q 043593 85 QSLNIKFKILDIQ 97 (103)
Q Consensus 85 A~~~~~~~~~~~~ 97 (103)
|+..|+.++-.+|
T Consensus 86 AALSGn~dvcrll 98 (396)
T KOG1710|consen 86 AALSGNQDVCRLL 98 (396)
T ss_pred HHHcCCchHHHHH
Confidence 9999999998876
No 88
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=98.93 E-value=3e-09 Score=73.48 Aligned_cols=83 Identities=17% Similarity=0.092 Sum_probs=69.3
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHhcCcCchhhhcccccCCChHHHHHHHcCCHHHHhhhhhhhhc--c----ccCCcHHH
Q 043593 10 SEDTALHIAVSDGRSDIVLKLVESMGQNASNVLKLQNEKGNTALHLAAALGNAAFVKIGCLDIQS--L----NIKIKLLD 83 (103)
Q Consensus 10 ~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~~--~----~~~~tpl~ 83 (103)
.|..||..||-.+..+++++|+++++ |++.+|..|+|.||..+..-..++-.+++..++. . ..+-|||.
T Consensus 239 fGEyPLSfAAC~nq~eivrlLl~~gA-----d~~aqDS~GNTVLH~lVi~~~~~My~~~L~~ga~~l~~v~N~qgLTPLt 313 (782)
T KOG3676|consen 239 FGEYPLSFAACTNQPEIVRLLLAHGA-----DPNAQDSNGNTVLHMLVIHFVTEMYDLALELGANALEHVRNNQGLTPLT 313 (782)
T ss_pred eccCchHHHHHcCCHHHHHHHHhcCC-----CCCccccCCChHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCChHH
Confidence 47899999999999999999999998 9999999999999999988666676666554444 2 33459999
Q ss_pred HHHhcCchhhhHhh
Q 043593 84 IQSLNIKFKILDIQ 97 (103)
Q Consensus 84 ~A~~~~~~~~~~~~ 97 (103)
+|+..|+.++.+-+
T Consensus 314 LAaklGk~emf~~i 327 (782)
T KOG3676|consen 314 LAAKLGKKEMFQHI 327 (782)
T ss_pred HHHHhhhHHHHHHH
Confidence 99999999977643
No 89
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=98.92 E-value=2.8e-09 Score=71.68 Aligned_cols=67 Identities=19% Similarity=0.101 Sum_probs=61.0
Q ss_pred CCCCCCcHHHHHHHcCCHHHHHHHHHhcCcCchhhhcccccCCChHHHHHHHcCCHHHHhhhhhhhhccccC
Q 043593 7 ITNSEDTALHIAVSDGRSDIVLKLVESMGQNASNVLKLQNEKGNTALHLAAALGNAAFVKIGCLDIQSLNIK 78 (103)
Q Consensus 7 ~d~~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~~~~~~ 78 (103)
-+.+|+|+||+||+.|+..+.++|+.++. ++...|..|.|+|.||.+.|..+|+..|+..++....+
T Consensus 657 ~~~~grt~LHLa~~~gnVvl~QLLiWyg~-----dv~~rda~g~t~l~yar~a~sqec~d~llq~gcp~e~~ 723 (749)
T KOG0705|consen 657 GEGDGRTALHLAARKGNVVLAQLLIWYGV-----DVMARDAHGRTALFYARQAGSQECIDVLLQYGCPDECG 723 (749)
T ss_pred cCCCCcchhhhhhhhcchhHHHHHHHhCc-----cceecccCCchhhhhHhhcccHHHHHHHHHcCCCcccc
Confidence 46678999999999999999999999998 89999999999999999999999999988887776655
No 90
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=98.85 E-value=1.4e-08 Score=67.34 Aligned_cols=88 Identities=22% Similarity=0.207 Sum_probs=70.7
Q ss_pred ccCCCCCCcH------HHHHHHcCCHHHHHHHHHhcCcCchhhhcccc-cCCChHHHHHHHcCCHHHHhhhhhh----hh
Q 043593 5 AKITNSEDTA------LHIAVSDGRSDIVLKLVESMGQNASNVLKLQN-EKGNTALHLAAALGNAAFVKIGCLD----IQ 73 (103)
Q Consensus 5 ~~~d~~g~t~------lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~-~~g~tpl~~a~~~~~~~~~~~l~~~----~~ 73 (103)
..+|++|.+. ||.+++.|+.++...|+..|+ ++|..+ ..|.||||+|++.|+...+++|... ++
T Consensus 121 ~~rDdD~~~~~~LsrQLhasvRt~nlet~LRll~lGA-----~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD~~a 195 (669)
T KOG0818|consen 121 PCRDDDSVTAKDLSKQLHSSVRTGNLETCLRLLSLGA-----QANFFHPEKGNTPLHVAAKAGQILQAELLAVYGADPGA 195 (669)
T ss_pred CCCCcchhhHHHHHHHHHHHhhcccHHHHHHHHHccc-----ccCCCCcccCCchhHHHHhccchhhhhHHhhccCCCCC
Confidence 3456666554 789999999999999999998 677655 6699999999999999888876544 44
Q ss_pred ccccCCcHHHHHHhcCchhhhHhh
Q 043593 74 SLNIKIKLLDIQSLNIKFKILDIQ 97 (103)
Q Consensus 74 ~~~~~~tpl~~A~~~~~~~~~~~~ 97 (103)
....|.||+.+|...||.++.+-+
T Consensus 196 ~d~~GmtP~~~AR~~gH~~laeRl 219 (669)
T KOG0818|consen 196 QDSSGMTPVDYARQGGHHELAERL 219 (669)
T ss_pred CCCCCCcHHHHHHhcCchHHHHHH
Confidence 446678999999999998877644
No 91
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=98.76 E-value=2.7e-08 Score=68.95 Aligned_cols=82 Identities=17% Similarity=0.197 Sum_probs=66.0
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHhcCcCchhhhccc-----------------------ccCCChHHHHHHHcCCHHHHh
Q 043593 10 SEDTALHIAVSDGRSDIVLKLVESMGQNASNVLKLQ-----------------------NEKGNTALHLAAALGNAAFVK 66 (103)
Q Consensus 10 ~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~-----------------------~~~g~tpl~~a~~~~~~~~~~ 66 (103)
.|.|+||+|..+.+.+.++.|++.|+ |++++ -+.|+.||.+|+..++.++++
T Consensus 183 ~GqSaLHiAIv~~~~~~V~lLl~~gA-----DV~aRa~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivr 257 (782)
T KOG3676|consen 183 YGQSALHIAIVNRDAELVRLLLAAGA-----DVHARACGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVR 257 (782)
T ss_pred cCcchHHHHHHhccHHHHHHHHHcCC-----chhhHhhccccCcccccccccccCCcceeeeccCchHHHHHcCCHHHHH
Confidence 68999999999999999999999997 55543 235788999999999999999
Q ss_pred hhhhh----hhccccCCcHHHHHHhcCchhhhHh
Q 043593 67 IGCLD----IQSLNIKIKLLDIQSLNIKFKILDI 96 (103)
Q Consensus 67 ~l~~~----~~~~~~~~tpl~~A~~~~~~~~~~~ 96 (103)
+|.+. .+.+..|+|.||..+.+-..+|.+.
T Consensus 258 lLl~~gAd~~aqDS~GNTVLH~lVi~~~~~My~~ 291 (782)
T KOG3676|consen 258 LLLAHGADPNAQDSNGNTVLHMLVIHFVTEMYDL 291 (782)
T ss_pred HHHhcCCCCCccccCCChHHHHHHHHHHHHHHHH
Confidence 98654 4455677899999887744555443
No 92
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=98.73 E-value=6.3e-09 Score=68.70 Aligned_cols=65 Identities=22% Similarity=0.224 Sum_probs=58.4
Q ss_pred ccccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCcCchhhhcccccCCChHHHHHHHcCCHHHHhhhhhh
Q 043593 3 QAAKITNSEDTALHIAVSDGRSDIVLKLVESMGQNASNVLKLQNEKGNTALHLAAALGNAAFVKIGCLD 71 (103)
Q Consensus 3 ~~~~~d~~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~ 71 (103)
+....|-+.+|+||.||..|+.+++++|++.... +++.+|.||+|||.-|..++|.+++++|...
T Consensus 531 D~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv----~~~~kDRw~rtPlDdA~~F~h~~v~k~L~~~ 595 (622)
T KOG0506|consen 531 DLETKDYDDRTALHVAAAEGHVEVVKFLLNACKV----DPDPKDRWGRTPLDDAKHFKHKEVVKLLEEA 595 (622)
T ss_pred cccccccccchhheeecccCceeHHHHHHHHHcC----CCChhhccCCCcchHhHhcCcHHHHHHHHHH
Confidence 3566788999999999999999999999998755 8899999999999999999999999987544
No 93
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.73 E-value=4.2e-08 Score=65.39 Aligned_cols=60 Identities=23% Similarity=0.315 Sum_probs=49.1
Q ss_pred ccccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCcCchhhhcccccCCChHHHHHHHcCCHHHHhh
Q 043593 3 QAAKITNSEDTALHIAVSDGRSDIVLKLVESMGQNASNVLKLQNEKGNTALHLAAALGNAAFVKI 67 (103)
Q Consensus 3 ~~~~~d~~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~ 67 (103)
.+++.|..|.||||+|+..||...++.|+..++ ++..++..|++|||-|+..|+.+++..
T Consensus 47 ~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~A-----dv~~kN~~gWs~L~EAv~~g~~q~i~~ 106 (560)
T KOG0522|consen 47 VIDRRDPPGRTPLHLAVRLGHVEAARILLSAGA-----DVSIKNNEGWSPLHEAVSTGNEQIITE 106 (560)
T ss_pred eeccccCCCCccHHHHHHhcCHHHHHHHHhcCC-----CccccccccccHHHHHHHcCCHHHHHH
Confidence 467788888888888888888888888888887 788888888888888888888776654
No 94
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=98.64 E-value=6.5e-08 Score=64.36 Aligned_cols=54 Identities=20% Similarity=0.161 Sum_probs=50.7
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHHhcCcCchhhhcccccCCChHHHHHHHcCCHHHHhh
Q 043593 9 NSEDTALHIAVSDGRSDIVLKLVESMGQNASNVLKLQNEKGNTALHLAAALGNAAFVKI 67 (103)
Q Consensus 9 ~~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~ 67 (103)
+-|.||||.|+..|...-++.|.-+|+ ++..+|..|.||+.+|...||.++.+.
T Consensus 165 ekg~TpLHvAAk~Gq~~Q~ElL~vYGA-----D~~a~d~~GmtP~~~AR~~gH~~laeR 218 (669)
T KOG0818|consen 165 EKGNTPLHVAAKAGQILQAELLAVYGA-----DPGAQDSSGMTPVDYARQGGHHELAER 218 (669)
T ss_pred ccCCchhHHHHhccchhhhhHHhhccC-----CCCCCCCCCCcHHHHHHhcCchHHHHH
Confidence 568999999999999999999999998 899999999999999999999988764
No 95
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=98.62 E-value=1.1e-07 Score=64.41 Aligned_cols=90 Identities=20% Similarity=0.131 Sum_probs=75.9
Q ss_pred cCCCCCCcHHHHHHHcCCHHHHHHHHHhcCcCchhhhcccccCCChHHHHHHHcCCHHHHhhhhhhhhc----cccCCcH
Q 043593 6 KITNSEDTALHIAVSDGRSDIVLKLVESMGQNASNVLKLQNEKGNTALHLAAALGNAAFVKIGCLDIQS----LNIKIKL 81 (103)
Q Consensus 6 ~~d~~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~~----~~~~~tp 81 (103)
..+.+-++.||+|+..|+.++++++++++..+ ..++.|..|.|.||-|+..++..++.++.+.++. ...|.||
T Consensus 894 ~~~~~~~sllh~a~~tg~~eivkyildh~p~e---lld~~de~get~lhkaa~~~~r~vc~~lvdagasl~ktd~kg~tp 970 (1004)
T KOG0782|consen 894 IQGPDHCSLLHYAAKTGNGEIVKYILDHGPSE---LLDMADETGETALHKAACQRNRAVCQLLVDAGASLRKTDSKGKTP 970 (1004)
T ss_pred eeCcchhhHHHHHHhcCChHHHHHHHhcCCHH---HHHHHhhhhhHHHHHHHHhcchHHHHHHHhcchhheecccCCCCh
Confidence 35667789999999999999999999999753 5778889999999999999999999987765544 3567899
Q ss_pred HHHHHhcCchhhhHhhh
Q 043593 82 LDIQSLNIKFKILDIQS 98 (103)
Q Consensus 82 l~~A~~~~~~~~~~~~~ 98 (103)
-.-|-..|+.++...|+
T Consensus 971 ~eraqqa~d~dlaayle 987 (1004)
T KOG0782|consen 971 QERAQQAGDPDLAAYLE 987 (1004)
T ss_pred HHHHHhcCCchHHHHHh
Confidence 99999999988877764
No 96
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=98.62 E-value=2.3e-08 Score=72.05 Aligned_cols=89 Identities=16% Similarity=0.128 Sum_probs=43.6
Q ss_pred cccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCcCchhhhcc-cccCCChHHHHHHHcCCHHHHhhhhhhhhccccC----
Q 043593 4 AAKITNSEDTALHIAVSDGRSDIVLKLVESMGQNASNVLKL-QNEKGNTALHLAAALGNAAFVKIGCLDIQSLNIK---- 78 (103)
Q Consensus 4 ~~~~d~~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~-~~~~g~tpl~~a~~~~~~~~~~~l~~~~~~~~~~---- 78 (103)
.+.+|..|.+||.+|+-.||..+++.|++... ++.. .|..+.|+|.++|.+|..+++++|+..++...-+
T Consensus 783 iehrdkkgf~plImaatagh~tvV~~llk~ha-----~veaQsdrtkdt~lSlacsggr~~vvelLl~~gankehrnvsD 857 (2131)
T KOG4369|consen 783 IEHRDKKGFVPLIMAATAGHITVVQDLLKAHA-----DVEAQSDRTKDTMLSLACSGGRTRVVELLLNAGANKEHRNVSD 857 (2131)
T ss_pred ccccccccchhhhhhcccCchHHHHHHHhhhh-----hhhhhcccccCceEEEecCCCcchHHHHHHHhhccccccchhh
Confidence 34455555555555555555555555555554 3332 3444555555555555555555544433332211
Q ss_pred CcHHHHHHhcCchhhhHhh
Q 043593 79 IKLLDIQSLNIKFKILDIQ 97 (103)
Q Consensus 79 ~tpl~~A~~~~~~~~~~~~ 97 (103)
-|||.+|...|+.+++.++
T Consensus 858 ytPlsla~Sggy~~iI~~l 876 (2131)
T KOG4369|consen 858 YTPLSLARSGGYTKIIHAL 876 (2131)
T ss_pred cCchhhhcCcchHHHHHHH
Confidence 1555555555555554443
No 97
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=98.58 E-value=2.9e-08 Score=69.52 Aligned_cols=78 Identities=29% Similarity=0.240 Sum_probs=66.2
Q ss_pred ccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCcCchhhhcccc-cCCChHHHHHHHcCCHHHHhhhhhhhhcc----ccCC
Q 043593 5 AKITNSEDTALHIAVSDGRSDIVLKLVESMGQNASNVLKLQN-EKGNTALHLAAALGNAAFVKIGCLDIQSL----NIKI 79 (103)
Q Consensus 5 ~~~d~~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~-~~g~tpl~~a~~~~~~~~~~~l~~~~~~~----~~~~ 79 (103)
...|..|+|+||+++..+...+++.|+.+|. ++..+| ..|+||||-|...|+.+|+..|+..+... ..+.
T Consensus 46 nikD~~GR~alH~~~S~~k~~~l~wLlqhGi-----dv~vqD~ESG~taLHRaiyyG~idca~lLL~~g~SL~i~Dkegl 120 (1267)
T KOG0783|consen 46 NIKDRYGRTALHIAVSENKNSFLRWLLQHGI-----DVFVQDEESGYTALHRAIYYGNIDCASLLLSKGRSLRIKDKEGL 120 (1267)
T ss_pred hHHHhhccceeeeeeccchhHHHHHHHhcCc-----eeeeccccccchHhhHhhhhchHHHHHHHHhcCCceEEecccCC
Confidence 4578999999999999999999999999987 899988 56999999999999999999877665544 3345
Q ss_pred cHHHHHHh
Q 043593 80 KLLDIQSL 87 (103)
Q Consensus 80 tpl~~A~~ 87 (103)
.||+.-++
T Consensus 121 splq~~~r 128 (1267)
T KOG0783|consen 121 SPLQFLSR 128 (1267)
T ss_pred CHHHHHhh
Confidence 88887665
No 98
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=98.54 E-value=3.7e-08 Score=71.03 Aligned_cols=84 Identities=21% Similarity=0.194 Sum_probs=73.1
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHhcCcCchhhhcccccCCChHHHHHHHcCCHHHHhhhhhh-----hhccccCCcHHHH
Q 043593 10 SEDTALHIAVSDGRSDIVLKLVESMGQNASNVLKLQNEKGNTALHLAAALGNAAFVKIGCLD-----IQSLNIKIKLLDI 84 (103)
Q Consensus 10 ~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~-----~~~~~~~~tpl~~ 84 (103)
+-.|+|-.||..||.+.+++|+.+|. ++..+|+.|.+||.+++..||..+|+.|+-. ......+.|+|.+
T Consensus 756 n~~t~LT~acaggh~e~vellv~rga-----niehrdkkgf~plImaatagh~tvV~~llk~ha~veaQsdrtkdt~lSl 830 (2131)
T KOG4369|consen 756 NIKTNLTSACAGGHREEVELLVVRGA-----NIEHRDKKGFVPLIMAATAGHITVVQDLLKAHADVEAQSDRTKDTMLSL 830 (2131)
T ss_pred cccccccccccCccHHHHHHHHHhcc-----cccccccccchhhhhhcccCchHHHHHHHhhhhhhhhhcccccCceEEE
Confidence 44688999999999999999999998 8999999999999999999999999986532 2333456799999
Q ss_pred HHhcCchhhhHhhh
Q 043593 85 QSLNIKFKILDIQS 98 (103)
Q Consensus 85 A~~~~~~~~~~~~~ 98 (103)
|+..|.++++++|-
T Consensus 831 acsggr~~vvelLl 844 (2131)
T KOG4369|consen 831 ACSGGRTRVVELLL 844 (2131)
T ss_pred ecCCCcchHHHHHH
Confidence 99999999999884
No 99
>PF13606 Ank_3: Ankyrin repeat
Probab=98.48 E-value=2.1e-07 Score=39.32 Aligned_cols=27 Identities=44% Similarity=0.432 Sum_probs=22.0
Q ss_pred CCChHHHHHHHcCCHHHHhhhhhhhhc
Q 043593 48 KGNTALHLAAALGNAAFVKIGCLDIQS 74 (103)
Q Consensus 48 ~g~tpl~~a~~~~~~~~~~~l~~~~~~ 74 (103)
.|+||||+|+..|+.+++++|++.++.
T Consensus 1 ~G~T~Lh~A~~~g~~e~v~~Ll~~gad 27 (30)
T PF13606_consen 1 NGNTPLHLAASNGNIEIVKYLLEHGAD 27 (30)
T ss_pred CCCCHHHHHHHhCCHHHHHHHHHcCCC
Confidence 478899999999999999988776544
No 100
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.43 E-value=6.5e-07 Score=59.92 Aligned_cols=81 Identities=23% Similarity=0.183 Sum_probs=62.1
Q ss_pred cHHHHHHHcCCHHHHHHHHH-hcCcCchhhhcccccCCChHHHHHHHcCCHHHHhhhhhhhhcc----ccCCcHHHHHHh
Q 043593 13 TALHIAVSDGRSDIVLKLVE-SMGQNASNVLKLQNEKGNTALHLAAALGNAAFVKIGCLDIQSL----NIKIKLLDIQSL 87 (103)
Q Consensus 13 t~lh~a~~~~~~~~~~~Ll~-~~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~~~----~~~~tpl~~A~~ 87 (103)
.|+|++......+-+..++. .... .++..|..|.||||+|+..|+..+++.|...++.. +.|++|||.|+.
T Consensus 22 ~~lh~~~~~~~~~sl~~el~~~~~~----~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv~~kN~~gWs~L~EAv~ 97 (560)
T KOG0522|consen 22 KPLHWAVVTTDSDSLEQELLAKVSL----VIDRRDPPGRTPLHLAVRLGHVEAARILLSAGADVSIKNNEGWSPLHEAVS 97 (560)
T ss_pred cccchhhhccchhhHHHHHhhhhhc----eeccccCCCCccHHHHHHhcCHHHHHHHHhcCCCccccccccccHHHHHHH
Confidence 34899998877765544332 2222 67889999999999999999999999887665533 566899999999
Q ss_pred cCchhhhHhh
Q 043593 88 NIKFKILDIQ 97 (103)
Q Consensus 88 ~~~~~~~~~~ 97 (103)
.|+.+++..+
T Consensus 98 ~g~~q~i~~v 107 (560)
T KOG0522|consen 98 TGNEQIITEV 107 (560)
T ss_pred cCCHHHHHHH
Confidence 9998776544
No 101
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=98.41 E-value=7.8e-07 Score=52.77 Aligned_cols=65 Identities=23% Similarity=0.135 Sum_probs=58.8
Q ss_pred ccccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCcCchhhhcccccCCChHHHHHHHcCCHHHHhhhhhh
Q 043593 3 QAAKITNSEDTALHIAVSDGRSDIVLKLVESMGQNASNVLKLQNEKGNTALHLAAALGNAAFVKIGCLD 71 (103)
Q Consensus 3 ~~~~~d~~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~ 71 (103)
..+..|..|||+++.|+..|..+.+.+|+.+|.. .+...|..+.+...+|-..|..+++..|.+.
T Consensus 4 ~in~rD~fgWTalmcaa~eg~~eavsyllgrg~a----~vgv~d~ssldaaqlaek~g~~~fvh~lfe~ 68 (223)
T KOG2384|consen 4 NINARDAFGWTALMCAAMEGSNEAVSYLLGRGVA----FVGVTDESSLDAAQLAEKGGAQAFVHSLFEN 68 (223)
T ss_pred CccchhhhcchHHHHHhhhcchhHHHHHhccCcc----cccccccccchHHHHHHhcChHHHHHHHHHH
Confidence 4678999999999999999999999999999954 7889999999999999999999999876543
No 102
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.24 E-value=1.9e-06 Score=37.03 Aligned_cols=29 Identities=38% Similarity=0.450 Sum_probs=23.2
Q ss_pred CCChHHHHHHHcCCHHHHhhhhhhhhccc
Q 043593 48 KGNTALHLAAALGNAAFVKIGCLDIQSLN 76 (103)
Q Consensus 48 ~g~tpl~~a~~~~~~~~~~~l~~~~~~~~ 76 (103)
.|.||||+|+..++.+++++|...++..+
T Consensus 1 dG~TpLh~A~~~~~~~~v~~Ll~~ga~~~ 29 (33)
T PF00023_consen 1 DGNTPLHYAAQRGHPDIVKLLLKHGADIN 29 (33)
T ss_dssp TSBBHHHHHHHTTCHHHHHHHHHTTSCTT
T ss_pred CcccHHHHHHHHHHHHHHHHHHHCcCCCC
Confidence 47899999999999999998877655543
No 103
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=98.22 E-value=1.9e-06 Score=60.99 Aligned_cols=85 Identities=24% Similarity=0.145 Sum_probs=69.9
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHHhcCcCchhhhcccccCCChHHHHHHHcCCHHHHhhhhhh----hhccccCCcHHHH
Q 043593 9 NSEDTALHIAVSDGRSDIVLKLVESMGQNASNVLKLQNEKGNTALHLAAALGNAAFVKIGCLD----IQSLNIKIKLLDI 84 (103)
Q Consensus 9 ~~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~----~~~~~~~~tpl~~ 84 (103)
..|.|+||.|+..+..-.+++|+..+. +++..|..|.+|+|.+...|+...+..+... .+....+.+|+++
T Consensus 654 ~~~~s~lh~a~~~~~~~~~e~ll~~ga-----~vn~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~~~a~~~~~~~~l~~ 728 (785)
T KOG0521|consen 654 CIGCSLLHVAVGTGDSGAVELLLQNGA-----DVNALDSKGRTPLHHATASGHTSIACLLLKRGADPNAFDPDGKLPLDI 728 (785)
T ss_pred hcccchhhhhhccchHHHHHHHHhcCC-----cchhhhccCCCcchhhhhhcccchhhhhccccccccccCccCcchhhH
Confidence 457999999999999999999999998 8999999999999999999998887765543 3444566799999
Q ss_pred HHhcCchhhhHhhh
Q 043593 85 QSLNIKFKILDIQS 98 (103)
Q Consensus 85 A~~~~~~~~~~~~~ 98 (103)
|....+.+..-++.
T Consensus 729 a~~~~~~d~~~l~~ 742 (785)
T KOG0521|consen 729 AMEAANADIVLLLR 742 (785)
T ss_pred HhhhccccHHHHHh
Confidence 97666666655543
No 104
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.09 E-value=9.4e-06 Score=52.92 Aligned_cols=58 Identities=24% Similarity=0.129 Sum_probs=52.8
Q ss_pred cHHHHHHHcCCHHHHHHHHHhcCcCchhhhcccccCCChHHHHHHHcCCHHHHhhhhhhhhcc
Q 043593 13 TALHIAVSDGRSDIVLKLVESMGQNASNVLKLQNEKGNTALHLAAALGNAAFVKIGCLDIQSL 75 (103)
Q Consensus 13 t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~~~ 75 (103)
--|-.||+.|..+.++.|++.|. ++|+.|.+...||.+|+.-||.+.+++|+.+++-.
T Consensus 38 ~elceacR~GD~d~v~~LVetgv-----nVN~vD~fD~spL~lAsLcGHe~vvklLLenGAiC 95 (516)
T KOG0511|consen 38 GELCEACRAGDVDRVRYLVETGV-----NVNAVDRFDSSPLYLASLCGHEDVVKLLLENGAIC 95 (516)
T ss_pred HHHHHHhhcccHHHHHHHHHhCC-----CcchhhcccccHHHHHHHcCcHHHHHHHHHcCCcc
Confidence 35788999999999999999987 89999999999999999999999999988877554
No 105
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=98.07 E-value=1.6e-05 Score=54.24 Aligned_cols=83 Identities=19% Similarity=0.075 Sum_probs=61.7
Q ss_pred HHHHHHHcCCHHHHHHHHHhcCcCchhhhcccccCCChHHHHHHHcCCHHHHhhhhhhhhc----cccCCcHHHHHHhcC
Q 043593 14 ALHIAVSDGRSDIVLKLVESMGQNASNVLKLQNEKGNTALHLAAALGNAAFVKIGCLDIQS----LNIKIKLLDIQSLNI 89 (103)
Q Consensus 14 ~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~~----~~~~~tpl~~A~~~~ 89 (103)
-|..|........+-.|+.+|..+ +.+-.-.+..|.|+||+|+..|++.+.++|...+.. +..|+|+|.+|.+.|
T Consensus 627 qLl~A~~~~Dl~t~~lLLAhg~~~-e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~dv~~rda~g~t~l~yar~a~ 705 (749)
T KOG0705|consen 627 QLLRAVAAEDLQTAILLLAHGSRE-EVNETCGEGDGRTALHLAARKGNVVLAQLLIWYGVDVMARDAHGRTALFYARQAG 705 (749)
T ss_pred HHHHHHHHHHHHHHHHHHhccCch-hhhccccCCCCcchhhhhhhhcchhHHHHHHHhCccceecccCCchhhhhHhhcc
Confidence 355566666677777888887432 112223456789999999999999999988765433 345679999999999
Q ss_pred chhhhHhh
Q 043593 90 KFKILDIQ 97 (103)
Q Consensus 90 ~~~~~~~~ 97 (103)
.-+|+++|
T Consensus 706 sqec~d~l 713 (749)
T KOG0705|consen 706 SQECIDVL 713 (749)
T ss_pred cHHHHHHH
Confidence 99999987
No 106
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=97.65 E-value=6.8e-05 Score=53.42 Aligned_cols=47 Identities=26% Similarity=0.336 Sum_probs=43.3
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHhcCcCchhhhcccccCCChHHHHHHHc
Q 043593 8 TNSEDTALHIAVSDGRSDIVLKLVESMGQNASNVLKLQNEKGNTALHLAAAL 59 (103)
Q Consensus 8 d~~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~g~tpl~~a~~~ 59 (103)
-++|+||||.|..+|+++++..|+++|. ....+|..|..||...++-
T Consensus 83 ~ESG~taLHRaiyyG~idca~lLL~~g~-----SL~i~Dkeglsplq~~~r~ 129 (1267)
T KOG0783|consen 83 EESGYTALHRAIYYGNIDCASLLLSKGR-----SLRIKDKEGLSPLQFLSRV 129 (1267)
T ss_pred ccccchHhhHhhhhchHHHHHHHHhcCC-----ceEEecccCCCHHHHHhhc
Confidence 4689999999999999999999999998 7899999999999987763
No 107
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=97.60 E-value=0.00016 Score=28.78 Aligned_cols=26 Identities=27% Similarity=0.454 Sum_probs=22.4
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHHhcC
Q 043593 10 SEDTALHIAVSDGRSDIVLKLVESMG 35 (103)
Q Consensus 10 ~g~t~lh~a~~~~~~~~~~~Ll~~~~ 35 (103)
.|.||+|+++..++.++++.|+..+.
T Consensus 1 ~~~~~l~~~~~~~~~~~~~~ll~~~~ 26 (30)
T smart00248 1 DGRTPLHLAAENGNLEVVKLLLDKGA 26 (30)
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 47889999999999999999998775
No 108
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=97.43 E-value=0.00019 Score=50.82 Aligned_cols=83 Identities=22% Similarity=0.220 Sum_probs=58.2
Q ss_pred cccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCcCchhhhcccccCCChHHHHHHHcCCHHHHhhhhhhhhc---------
Q 043593 4 AAKITNSEDTALHIAVSDGRSDIVLKLVESMGQNASNVLKLQNEKGNTALHLAAALGNAAFVKIGCLDIQS--------- 74 (103)
Q Consensus 4 ~~~~d~~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~~--------- 74 (103)
.+.+|--|.++|+.|....+.++++.|+++.. .. .-+|.+|...|..++++.+......
T Consensus 55 inc~d~lGr~al~iai~nenle~~eLLl~~~~-----~~-------gdALL~aI~~~~v~~VE~ll~~~~~~~~~~~~~d 122 (822)
T KOG3609|consen 55 INCRDPLGRLALHIAIDNENLELQELLLDTSS-----EE-------GDALLLAIAVGSVPLVELLLVHFVDAPYLERSGD 122 (822)
T ss_pred hhccChHhhhceecccccccHHHHHHHhcCcc-----cc-------chHHHHHHHHHHHHHHHHHHhcccccchhccccc
Confidence 34567777888888888888888888877753 11 2367777888888887765432111
Q ss_pred -----cccCCcHHHHHHhcCchhhhHhhh
Q 043593 75 -----LNIKIKLLDIQSLNIKFKILDIQS 98 (103)
Q Consensus 75 -----~~~~~tpl~~A~~~~~~~~~~~~~ 98 (103)
-...-||+.+|+..+|+|++++|-
T Consensus 123 ~~~~~ft~ditPliLAAh~NnyEil~~Ll 151 (822)
T KOG3609|consen 123 ANSPHFTPDITPLMLAAHLNNFEILQCLL 151 (822)
T ss_pred cCcccCCCCccHHHHHHHhcchHHHHHHH
Confidence 112249999999999999999983
No 109
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=97.41 E-value=6.5e-05 Score=54.05 Aligned_cols=57 Identities=19% Similarity=0.058 Sum_probs=29.0
Q ss_pred hhcccccCCChHHHHHHHcCCHHHHhhhhhhhhc----------cccCCcHHHHHHhcCchhhhHhh
Q 043593 41 VLKLQNEKGNTALHLAAALGNAAFVKIGCLDIQS----------LNIKIKLLDIQSLNIKFKILDIQ 97 (103)
Q Consensus 41 ~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~~----------~~~~~tpl~~A~~~~~~~~~~~~ 97 (103)
.++.+|..|+||||+|+..|+..++..+....+. ...|.|+-.+|..+|+..+...+
T Consensus 633 ai~i~D~~G~tpL~wAa~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~la~s~g~~gia~~l 699 (975)
T KOG0520|consen 633 AIDIRDRNGWTPLHWAAFRGREKLVASLIELGADPGAVTDPSPETPGGKTAADLARANGHKGIAGYL 699 (975)
T ss_pred ccccccCCCCcccchHhhcCHHHHHHHHHHhccccccccCCCCCCCCCCchhhhhhcccccchHHHH
Confidence 3455566666666666666666655543321111 11233555666666665555444
No 110
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=97.31 E-value=0.0005 Score=41.18 Aligned_cols=58 Identities=14% Similarity=-0.050 Sum_probs=49.1
Q ss_pred hhcccccCCChHHHHHHHcCCHHHHhhhhhhh-----hccccCCcHHHHHHhcCchhhhHhhh
Q 043593 41 VLKLQNEKGNTALHLAAALGNAAFVKIGCLDI-----QSLNIKIKLLDIQSLNIKFKILDIQS 98 (103)
Q Consensus 41 ~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~-----~~~~~~~tpl~~A~~~~~~~~~~~~~ 98 (103)
+++..|..|+|+++.|+..|+.+.+++|...+ .....+.+++.+|-..|..+++..+.
T Consensus 4 ~in~rD~fgWTalmcaa~eg~~eavsyllgrg~a~vgv~d~ssldaaqlaek~g~~~fvh~lf 66 (223)
T KOG2384|consen 4 NINARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGVTDESSLDAAQLAEKGGAQAFVHSLF 66 (223)
T ss_pred CccchhhhcchHHHHHhhhcchhHHHHHhccCcccccccccccchHHHHHHhcChHHHHHHHH
Confidence 78999999999999999999999999986554 22234569999999999999998874
No 111
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=97.30 E-value=0.00024 Score=51.31 Aligned_cols=89 Identities=12% Similarity=0.003 Sum_probs=61.9
Q ss_pred cccCCCCCCcHHHHHHHcCCHHHHHHHHHh-cCcCchhhhcccccCCChHHHHHHHcCCHHHHhhhh-hh----hhcccc
Q 043593 4 AAKITNSEDTALHIAVSDGRSDIVLKLVES-MGQNASNVLKLQNEKGNTALHLAAALGNAAFVKIGC-LD----IQSLNI 77 (103)
Q Consensus 4 ~~~~d~~g~t~lh~a~~~~~~~~~~~Ll~~-~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~-~~----~~~~~~ 77 (103)
+......|++-+|.++..++.-+++.+++- +. ....-|..|.-.+|+++. ++.+++-++. .. ......
T Consensus 567 ~~~~~~r~~lllhL~a~~lyawLie~~~e~~~~-----~~~eld~d~qgV~hfca~-lg~ewA~ll~~~~~~ai~i~D~~ 640 (975)
T KOG0520|consen 567 SSSVNFRDMLLLHLLAELLYAWLIEKVIEWAGS-----GDLELDRDGQGVIHFCAA-LGYEWAFLPISADGVAIDIRDRN 640 (975)
T ss_pred cccCCCcchHHHHHHHHHhHHHHHHHHhccccc-----CchhhcccCCChhhHhhh-cCCceeEEEEeecccccccccCC
Confidence 455667889999999999999999999885 43 333445555555666444 4555544332 22 233356
Q ss_pred CCcHHHHHHhcCchhhhHhhh
Q 043593 78 KIKLLDIQSLNIKFKILDIQS 98 (103)
Q Consensus 78 ~~tpl~~A~~~~~~~~~~~~~ 98 (103)
|+||||||.+.|+..++..+.
T Consensus 641 G~tpL~wAa~~G~e~l~a~l~ 661 (975)
T KOG0520|consen 641 GWTPLHWAAFRGREKLVASLI 661 (975)
T ss_pred CCcccchHhhcCHHHHHHHHH
Confidence 789999999999999998875
No 112
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=97.09 E-value=0.00039 Score=46.96 Aligned_cols=42 Identities=26% Similarity=0.271 Sum_probs=34.6
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHhcCcCchhhhcccccCCChHHHHHH
Q 043593 11 EDTALHIAVSDGRSDIVLKLVESMGQNASNVLKLQNEKGNTALHLAA 57 (103)
Q Consensus 11 g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~g~tpl~~a~ 57 (103)
-.|+||+|+..|...++.+|++.++ |+...|..|.||..++.
T Consensus 430 tsT~LH~aa~qg~~k~v~~~Leeg~-----Dp~~kd~~Grtpy~ls~ 471 (591)
T KOG2505|consen 430 TSTFLHYAAAQGARKCVKYFLEEGC-----DPSTKDGAGRTPYSLSA 471 (591)
T ss_pred cchHHHHHHhcchHHHHHHHHHhcC-----CchhcccCCCCcccccc
Confidence 4678888888888888888888887 78888888888888765
No 113
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=96.83 E-value=0.0021 Score=44.52 Aligned_cols=61 Identities=21% Similarity=0.229 Sum_probs=54.8
Q ss_pred ccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCcCchhhhcccccCCChHHHHHHHcCCHHHHhhhhh
Q 043593 5 AKITNSEDTALHIAVSDGRSDIVLKLVESMGQNASNVLKLQNEKGNTALHLAAALGNAAFVKIGCL 70 (103)
Q Consensus 5 ~~~d~~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~ 70 (103)
+..|+.|.|+||.|+..++..+..+|++.|+ .....|..|.||-.-|.+.|..++..||-.
T Consensus 928 d~~de~get~lhkaa~~~~r~vc~~lvdaga-----sl~ktd~kg~tp~eraqqa~d~dlaayle~ 988 (1004)
T KOG0782|consen 928 DMADETGETALHKAACQRNRAVCQLLVDAGA-----SLRKTDSKGKTPQERAQQAGDPDLAAYLES 988 (1004)
T ss_pred HHHhhhhhHHHHHHHHhcchHHHHHHHhcch-----hheecccCCCChHHHHHhcCCchHHHHHhh
Confidence 4567899999999999999999999999998 688889999999999999999999888754
No 114
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=96.56 E-value=0.0046 Score=40.89 Aligned_cols=51 Identities=20% Similarity=0.244 Sum_probs=37.9
Q ss_pred ccccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCcCchhhhcccccCCChHHHHHHHc
Q 043593 3 QAAKITNSEDTALHIAVSDGRSDIVLKLVESMGQNASNVLKLQNEKGNTALHLAAAL 59 (103)
Q Consensus 3 ~~~~~d~~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~g~tpl~~a~~~ 59 (103)
.++++|....+||.+|+..||.+++++|++.|+ ....-...|. -.|+++.+
T Consensus 61 nVN~vD~fD~spL~lAsLcGHe~vvklLLenGA-----iC~rdtf~G~-RC~YgaLn 111 (516)
T KOG0511|consen 61 NVNAVDRFDSSPLYLASLCGHEDVVKLLLENGA-----ICSRDTFDGD-RCHYGALN 111 (516)
T ss_pred CcchhhcccccHHHHHHHcCcHHHHHHHHHcCC-----cccccccCcc-hhhhhhhh
Confidence 367889999999999999999999999999997 3433334444 33455443
No 115
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=96.37 E-value=0.0078 Score=23.36 Aligned_cols=23 Identities=48% Similarity=0.505 Sum_probs=16.6
Q ss_pred CChHHHHHHHcCCHHHHhhhhhh
Q 043593 49 GNTALHLAAALGNAAFVKIGCLD 71 (103)
Q Consensus 49 g~tpl~~a~~~~~~~~~~~l~~~ 71 (103)
|.+|+++++..++.++++.+...
T Consensus 2 ~~~~l~~~~~~~~~~~~~~ll~~ 24 (30)
T smart00248 2 GRTPLHLAAENGNLEVVKLLLDK 24 (30)
T ss_pred CCCHHHHHHHcCCHHHHHHHHHc
Confidence 56777888777777777766544
No 116
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=96.06 E-value=0.0041 Score=44.73 Aligned_cols=61 Identities=21% Similarity=0.274 Sum_probs=53.6
Q ss_pred cccccCCCCCCcHHHHHHHcCCHHHHHHHHHhcCcCchhhhcccccCCChHHHHHHHcCCHHHHhh
Q 043593 2 IQAAKITNSEDTALHIAVSDGRSDIVLKLVESMGQNASNVLKLQNEKGNTALHLAAALGNAAFVKI 67 (103)
Q Consensus 2 a~~~~~d~~g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~ 67 (103)
|+++..|.-|.+|+|.+...|+......|+++++ +.+..+..|..|+.++....+.+.+-+
T Consensus 680 a~vn~~d~~g~~plh~~~~~g~~~~~~~ll~~~a-----~~~a~~~~~~~~l~~a~~~~~~d~~~l 740 (785)
T KOG0521|consen 680 ADVNALDSKGRTPLHHATASGHTSIACLLLKRGA-----DPNAFDPDGKLPLDIAMEAANADIVLL 740 (785)
T ss_pred CcchhhhccCCCcchhhhhhcccchhhhhccccc-----cccccCccCcchhhHHhhhccccHHHH
Confidence 5688899999999999999999999999999988 899999999999999987766555544
No 117
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=95.93 E-value=0.015 Score=39.75 Aligned_cols=71 Identities=18% Similarity=0.068 Sum_probs=46.1
Q ss_pred HHHHHHHHHhcCcCchh-hhcccccCCChHHHHHHHcCCHHHHhhhhhhh----hccccCCcHHHHHHhcCchhhhHhh
Q 043593 24 SDIVLKLVESMGQNASN-VLKLQNEKGNTALHLAAALGNAAFVKIGCLDI----QSLNIKIKLLDIQSLNIKFKILDIQ 97 (103)
Q Consensus 24 ~~~~~~Ll~~~~~~~~~-~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~----~~~~~~~tpl~~A~~~~~~~~~~~~ 97 (103)
...+++|.+.+....+. -+...++...|+||+|+..|..+|+.+++..+ .....|.||+.++. +.+|-..+
T Consensus 404 p~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp~~kd~~Grtpy~ls~---nkdVk~~F 479 (591)
T KOG2505|consen 404 PDSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEGCDPSTKDGAGRTPYSLSA---NKDVKSIF 479 (591)
T ss_pred hhHHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHHHHhcCCchhcccCCCCcccccc---cHHHHHHH
Confidence 34577788776421000 11223566789999999999999998865544 44456679998876 55554443
No 118
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=95.36 E-value=0.031 Score=40.27 Aligned_cols=85 Identities=14% Similarity=0.108 Sum_probs=67.7
Q ss_pred CCcHHHHHHHcCCHHHHHHHHHhcCcCchhhhcccccCCChHHHHHHHcCCHHHHhhhhhhhhccccCCcHHHHHHhcCc
Q 043593 11 EDTALHIAVSDGRSDIVLKLVESMGQNASNVLKLQNEKGNTALHLAAALGNAAFVKIGCLDIQSLNIKIKLLDIQSLNIK 90 (103)
Q Consensus 11 g~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~~~~~~~tpl~~A~~~~~ 90 (103)
+.--...|+..|+...++..++.... ..-+++-.|.-|.++++.|..+.+.++.++|++..... +.+|-+|...|.
T Consensus 25 ~e~~fL~a~E~gd~~~V~k~l~~~~~-~~lninc~d~lGr~al~iai~nenle~~eLLl~~~~~~---gdALL~aI~~~~ 100 (822)
T KOG3609|consen 25 GEKGFLLAHENGDVPLVAKALEYKAV-SKLNINCRDPLGRLALHIAIDNENLELQELLLDTSSEE---GDALLLAIAVGS 100 (822)
T ss_pred hhHHHHHHHHcCChHHHHHHHHhccc-cccchhccChHhhhceecccccccHHHHHHHhcCcccc---chHHHHHHHHHH
Confidence 34446778999999999888876542 22267778999999999999999999999987765443 678889999999
Q ss_pred hhhhHhhhh
Q 043593 91 FKILDIQSL 99 (103)
Q Consensus 91 ~~~~~~~~~ 99 (103)
.+.++++-.
T Consensus 101 v~~VE~ll~ 109 (822)
T KOG3609|consen 101 VPLVELLLV 109 (822)
T ss_pred HHHHHHHHh
Confidence 999988744
No 119
>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=86.11 E-value=6.2 Score=24.95 Aligned_cols=88 Identities=10% Similarity=0.081 Sum_probs=50.4
Q ss_pred CcHHHHHHHcCCHHHHHHHHHhcCcCchhhhcccccCCChHHHHHHH--cCCHHHHhhhhhhh--------hccccCCcH
Q 043593 12 DTALHIAVSDGRSDIVLKLVESMGQNASNVLKLQNEKGNTALHLAAA--LGNAAFVKIGCLDI--------QSLNIKIKL 81 (103)
Q Consensus 12 ~t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~g~tpl~~a~~--~~~~~~~~~l~~~~--------~~~~~~~tp 81 (103)
.+++.++...+..+++.+|++.-...+++...... +.--+.++-+ .-+..++++.+..+ ...+.|.|-
T Consensus 180 ~~Am~~si~~~K~dva~~lls~f~ft~~dv~~~~~--~~ydieY~LS~h~a~~kvL~~Fi~~Glv~vN~~F~~~NSGdtM 257 (284)
T PF06128_consen 180 HQAMWLSIGNAKEDVALYLLSKFNFTKQDVASMEK--ELYDIEYLLSEHSASYKVLEYFINRGLVDVNKKFQKVNSGDTM 257 (284)
T ss_pred HHHHHHHhcccHHHHHHHHHhhcceecchhhhcCc--chhhHHHHHhhcCCcHHHHHHHHhccccccchhhhccCCcchH
Confidence 45666777677777888888765322222222221 1112223322 23345555533221 223667799
Q ss_pred HHHHHhcCchhhhHhhhhhc
Q 043593 82 LDIQSLNIKFKILDIQSLNI 101 (103)
Q Consensus 82 l~~A~~~~~~~~~~~~~~~~ 101 (103)
|.-|...++.+++.+|-.++
T Consensus 258 LDNA~Ky~~~emi~~Llk~G 277 (284)
T PF06128_consen 258 LDNAMKYKNSEMIAFLLKYG 277 (284)
T ss_pred HHhHHhcCcHHHHHHHHHcC
Confidence 99999999999999986553
No 120
>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=80.98 E-value=4.6 Score=20.40 Aligned_cols=47 Identities=17% Similarity=0.123 Sum_probs=36.4
Q ss_pred cHHHHHHHcCCHHHHHHHHHhcCcCchhhhcccccCCChHHHHHHHcCCHHHHhhhhhh
Q 043593 13 TALHIAVSDGRSDIVLKLVESMGQNASNVLKLQNEKGNTALHLAAALGNAAFVKIGCLD 71 (103)
Q Consensus 13 t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~ 71 (103)
..+..|...|+.++++.+++.+. ++ ...+..|....+-++++++.+.
T Consensus 8 ~tl~~Ai~GGN~eII~~c~~~~~------~~------~~~l~~AI~~H~n~i~~~l~~~ 54 (76)
T PF11929_consen 8 KTLEYAIIGGNFEIINICLKKNK------PD------NDCLEYAIKSHNNEIADWLIEN 54 (76)
T ss_pred HHHHHHHhCCCHHHHHHHHHHhc------cH------HHHHHHHHHHhhHHHHHHHHHh
Confidence 45788999999999998887653 11 2458889998999999988665
No 121
>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=74.93 E-value=11 Score=22.92 Aligned_cols=20 Identities=25% Similarity=0.277 Sum_probs=9.9
Q ss_pred HHHHHcCCHHHHHHHHHhcC
Q 043593 16 HIAVSDGRSDIVLKLVESMG 35 (103)
Q Consensus 16 h~a~~~~~~~~~~~Ll~~~~ 35 (103)
..|+..|....+...+++|+
T Consensus 148 ~~a~~kgll~F~letlkygg 167 (192)
T PF03158_consen 148 EKAAAKGLLPFVLETLKYGG 167 (192)
T ss_pred HHHHHCCCHHHHHHHHHcCC
Confidence 34455555555555555554
No 122
>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=69.36 E-value=23 Score=21.61 Aligned_cols=73 Identities=18% Similarity=0.130 Sum_probs=42.3
Q ss_pred cHHHHHHHcCCHHHHHHHHHhcCcCchhhhcccccCCChHHHHHHHcCCHHHHhhhhhhhhccccCCcHHHHHHhcCchh
Q 043593 13 TALHIAVSDGRSDIVLKLVESMGQNASNVLKLQNEKGNTALHLAAALGNAAFVKIGCLDIQSLNIKIKLLDIQSLNIKFK 92 (103)
Q Consensus 13 t~lh~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~g~tpl~~a~~~~~~~~~~~l~~~~~~~~~~~tpl~~A~~~~~~~ 92 (103)
.-+..|+.++-.++++..-+.... .-....+-+-.||+..+.+++.+........+ -.+-+.+|...++.+
T Consensus 48 CLl~HAVk~nmL~ILqkyke~L~~--------~~~~~q~LFElAC~~qkydiV~WI~qnL~i~~-~~~iFdIA~~~kDls 118 (192)
T PF03158_consen 48 CLLYHAVKYNMLSILQKYKEDLEN--------ERYLNQELFELACEEQKYDIVKWIGQNLHIYN-PEDIFDIAFAKKDLS 118 (192)
T ss_pred HHHHHHHHcCcHHHHHHHHHHhhc--------chhHHHHHHHHHHHHccccHHHHHhhccCCCC-chhhhhhhhhccchh
Confidence 345667777777777666655431 12345567778888888888887533222211 123455555555554
Q ss_pred hh
Q 043593 93 IL 94 (103)
Q Consensus 93 ~~ 94 (103)
+.
T Consensus 119 Ly 120 (192)
T PF03158_consen 119 LY 120 (192)
T ss_pred HH
Confidence 43
No 123
>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=58.58 E-value=17 Score=23.11 Aligned_cols=27 Identities=30% Similarity=0.272 Sum_probs=14.5
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHHhcC
Q 043593 9 NSEDTALHIAVSDGRSDIVLKLVESMG 35 (103)
Q Consensus 9 ~~g~t~lh~a~~~~~~~~~~~Ll~~~~ 35 (103)
++|.|-|--|...+..+.+.+|+++|+
T Consensus 252 NSGdtMLDNA~Ky~~~emi~~Llk~GA 278 (284)
T PF06128_consen 252 NSGDTMLDNAMKYKNSEMIAFLLKYGA 278 (284)
T ss_pred CCcchHHHhHHhcCcHHHHHHHHHcCc
Confidence 345555555555555555555555554
No 124
>PF12645 HTH_16: Helix-turn-helix domain; InterPro: IPR024760 This domain appears to be a helix-turn-helix domain, suggesting a transcriptional regulatory protein. Some proteins with this domain are annotated as conjugative transposon proteins.
Probab=35.33 E-value=61 Score=15.94 Aligned_cols=21 Identities=10% Similarity=0.240 Sum_probs=16.5
Q ss_pred HHHHHHHcCCHHHHHHHHHhc
Q 043593 14 ALHIAVSDGRSDIVLKLVESM 34 (103)
Q Consensus 14 ~lh~a~~~~~~~~~~~Ll~~~ 34 (103)
++..+|..|..+.++.++++-
T Consensus 2 ~vI~~A~~GD~~A~~~IL~~y 22 (65)
T PF12645_consen 2 EVIKAAKQGDPEAMEEILKHY 22 (65)
T ss_pred HHHHHHHcCCHHHHHHHHHHH
Confidence 567788899998888777765
No 125
>PF00906 Hepatitis_core: Hepatitis core antigen; InterPro: IPR002006 This entry represent the core domain of the viral capsid (HBcAg) from various Hepatitis B virus (HBV), which is a major human pathogen. The virus is composed of an outer envelope of host-derived lipid containing the surface proteins, and an inner protein capsid that contains genomic DNA. The capsid is composed of a single polypeptide, HBcAg, also known as the core antigen. The capsid has a 5-helical fold, where two long helices form a hairpin that dimerises into a 4-helical bundle []; this fold is unusual for icosahedral viruses. The monomer fold is stabilised by a hydrophobic core that is highly conserved among human viral variants. The capsid is assembled from dimers via interactions involving a highly conserved arginine-rich region near the C terminus. This viral capsid acts as a core antigen, the major immunodominant region lying at the tips of the alpha-helical hairpins that form spikes on the capsid surface.; GO: 0005198 structural molecule activity, 0009405 pathogenesis; PDB: 1HHH_C 2QIJ_C 3KXS_F 2G34_B 2G33_C 3OX8_F 3OXS_C 3OXR_C 1QGT_B.
Probab=24.14 E-value=65 Score=19.34 Aligned_cols=23 Identities=17% Similarity=-0.013 Sum_probs=16.7
Q ss_pred HHHHHHH-cCCHHHHHHHHHhcCc
Q 043593 14 ALHIAVS-DGRSDIVLKLVESMGQ 36 (103)
Q Consensus 14 ~lh~a~~-~~~~~~~~~Ll~~~~~ 36 (103)
.+|+.|. .|...++++|...|.+
T Consensus 101 WfH~sCLtfG~~tV~eYlvsfg~W 124 (187)
T PF00906_consen 101 WFHYSCLTFGEETVTEYLVSFGVW 124 (187)
T ss_dssp HHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred hhheeeeeecchhHHHHHHHhccc
Confidence 3566666 5777888888888864
No 126
>KOG3836 consensus HLH transcription factor EBF/Olf-1 and related DNA binding proteins [Transcription]
Probab=21.80 E-value=34 Score=24.74 Aligned_cols=32 Identities=22% Similarity=0.211 Sum_probs=22.0
Q ss_pred ccccCCCCCCcHHHHHHHcCCHHHHHHHHHhc
Q 043593 3 QAAKITNSEDTALHIAVSDGRSDIVLKLVESM 34 (103)
Q Consensus 3 ~~~~~d~~g~t~lh~a~~~~~~~~~~~Ll~~~ 34 (103)
+....|..|.+|+|+++.-|..++++.++...
T Consensus 421 ~~~~~d~f~~~p~~~~~~sgdp~~~~~~~~~~ 452 (605)
T KOG3836|consen 421 HPNDDDKFGFTPLHIPQISGDPRIIQLLLNCK 452 (605)
T ss_pred ccchhcccccccccccCCCCCHHHhhhhhhhh
Confidence 44566777777888877777777766655443
Done!