Your job contains 1 sequence.
>043594
MPVTSCGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVR
NVVSWTAIIAAFAQEWEVDMCYTFIV
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 043594
(86 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2049736 - symbol:AT2G37320 "AT2G37320" species... 240 1.4e-19 1
TAIR|locus:2121055 - symbol:AT4G38010 "AT4G38010" species... 164 3.1e-11 1
TAIR|locus:2149664 - symbol:MEF1 "mitochondrial RNA editi... 159 1.2e-10 1
TAIR|locus:2058812 - symbol:AT2G02750 species:3702 "Arabi... 158 1.6e-10 1
TAIR|locus:2205425 - symbol:AT1G68930 "AT1G68930" species... 154 5.7e-10 1
TAIR|locus:2151694 - symbol:AT5G37570 "AT5G37570" species... 152 5.9e-10 1
TAIR|locus:2054131 - symbol:SLO2 "AT2G13600" species:3702... 148 2.3e-09 1
TAIR|locus:2011892 - symbol:AT1G50270 "AT1G50270" species... 145 3.8e-09 1
TAIR|locus:2124603 - symbol:AT4G18520 species:3702 "Arabi... 145 4.0e-09 1
TAIR|locus:2040565 - symbol:AT2G36730 species:3702 "Arabi... 142 6.1e-09 1
TAIR|locus:2148101 - symbol:AT5G16860 "AT5G16860" species... 143 1.0e-08 1
TAIR|locus:2057574 - symbol:AT2G33760 species:3702 "Arabi... 139 1.6e-08 1
TAIR|locus:2090857 - symbol:AT3G26630 "AT3G26630" species... 136 2.3e-08 1
TAIR|locus:2078653 - symbol:AT3G02010 species:3702 "Arabi... 139 2.6e-08 1
TAIR|locus:2057986 - symbol:AT2G36980 species:3702 "Arabi... 136 3.8e-08 1
TAIR|locus:2154965 - symbol:AT5G66500 "AT5G66500" species... 134 4.9e-08 1
TAIR|locus:2167593 - symbol:AT5G44230 species:3702 "Arabi... 135 5.2e-08 1
TAIR|locus:4010713895 - symbol:AT4G21065 "AT4G21065" spec... 134 5.8e-08 1
TAIR|locus:2098901 - symbol:AT3G61170 species:3702 "Arabi... 135 6.6e-08 1
TAIR|locus:2062939 - symbol:AT2G46050 species:3702 "Arabi... 133 7.3e-08 1
TAIR|locus:2020703 - symbol:AT1G03540 species:3702 "Arabi... 132 9.8e-08 1
TAIR|locus:2096299 - symbol:AT3G05340 "AT3G05340" species... 132 1.1e-07 1
TAIR|locus:2100392 - symbol:AT3G47840 species:3702 "Arabi... 132 1.2e-07 1
TAIR|locus:2122551 - symbol:AT4G39530 species:3702 "Arabi... 131 1.9e-07 1
TAIR|locus:2013079 - symbol:AT1G19720 "AT1G19720" species... 131 2.1e-07 1
TAIR|locus:2032840 - symbol:AT1G16480 "AT1G16480" species... 130 2.8e-07 1
TAIR|locus:505006130 - symbol:AT1G18485 species:3702 "Ara... 130 2.9e-07 1
TAIR|locus:2131631 - symbol:AT4G35130 "AT4G35130" species... 127 4.9e-07 1
TAIR|locus:2095289 - symbol:AT3G09040 "AT3G09040" species... 127 6.6e-07 1
TAIR|locus:2091546 - symbol:AT3G13770 species:3702 "Arabi... 124 7.4e-07 1
TAIR|locus:2025946 - symbol:CRR28 "CHLORORESPIRATORY REDU... 124 7.5e-07 1
TAIR|locus:2202074 - symbol:CRR22 "CHLORORESPIRATORY REDU... 125 8.0e-07 1
TAIR|locus:2162207 - symbol:CRR21 "chlororespiratory redu... 125 8.3e-07 1
TAIR|locus:4010713776 - symbol:AT3G26782 species:3702 "Ar... 123 1.0e-06 1
TAIR|locus:2064828 - symbol:AT2G40720 species:3702 "Arabi... 124 1.1e-06 1
TAIR|locus:2049726 - symbol:AT2G37310 species:3702 "Arabi... 122 1.3e-06 1
TAIR|locus:2150690 - symbol:EMB175 "AT5G03800" species:37... 123 1.5e-06 1
TAIR|locus:2117084 - symbol:AT4G18840 "AT4G18840" species... 119 2.1e-06 1
TAIR|locus:2130389 - symbol:LOI1 "lovastatin insensitive ... 120 2.2e-06 1
TAIR|locus:2020763 - symbol:AT1G03510 species:3702 "Arabi... 116 3.1e-06 1
TAIR|locus:2083631 - symbol:AT3G15130 "AT3G15130" species... 118 3.7e-06 1
TAIR|locus:2055919 - symbol:AT2G22070 "AT2G22070" species... 118 4.3e-06 1
TAIR|locus:2089333 - symbol:AT3G16610 "AT3G16610" species... 117 4.4e-06 1
TAIR|locus:2086964 - symbol:MEF25 "mitochondrial RNA edit... 116 5.0e-06 1
TAIR|locus:2019160 - symbol:AT1G74630 species:3702 "Arabi... 116 5.5e-06 1
TAIR|locus:2132452 - symbol:AT4G08210 "AT4G08210" species... 116 6.0e-06 1
TAIR|locus:2825319 - symbol:AT1G71460 "AT1G71460" species... 116 6.0e-06 1
TAIR|locus:2080727 - symbol:MEF10 "mitochondrial RNA edit... 115 6.7e-06 1
TAIR|locus:2115130 - symbol:AT4G37170 "AT4G37170" species... 115 7.7e-06 1
TAIR|locus:2012295 - symbol:AT1G09410 species:3702 "Arabi... 115 7.9e-06 1
TAIR|locus:2119440 - symbol:AT4G13650 species:3702 "Arabi... 117 8.0e-06 1
TAIR|locus:2038603 - symbol:AT2G27610 "AT2G27610" species... 116 8.0e-06 1
TAIR|locus:2825364 - symbol:AT1G71420 "AT1G71420" species... 115 8.5e-06 1
TAIR|locus:2063771 - symbol:AT2G03380 species:3702 "Arabi... 114 9.8e-06 1
TAIR|locus:2096414 - symbol:AT3G03580 species:3702 "Arabi... 115 1.0e-05 1
TAIR|locus:2134842 - symbol:AT4G04370 species:3702 "Arabi... 114 1.1e-05 1
TAIR|locus:2176927 - symbol:AT5G52850 species:3702 "Arabi... 115 1.1e-05 1
TAIR|locus:2083961 - symbol:AT3G53360 "AT3G53360" species... 114 1.1e-05 1
TAIR|locus:2118964 - symbol:EMB2758 "embryo defective 275... 114 1.2e-05 1
TAIR|locus:2196583 - symbol:ECB2 "EARLY CHLOROPLAST BIOGE... 114 1.3e-05 1
TAIR|locus:2129361 - symbol:AT4G14050 species:3702 "Arabi... 112 1.4e-05 1
TAIR|locus:2032955 - symbol:AT1G25360 "AT1G25360" species... 113 1.5e-05 1
TAIR|locus:2028850 - symbol:AT1G23450 species:3702 "Arabi... 112 1.5e-05 1
TAIR|locus:2181201 - symbol:AT5G27110 species:3702 "Arabi... 111 2.1e-05 1
TAIR|locus:2103483 - symbol:OTP84 "ORGANELLE TRANSCRIPT P... 112 2.2e-05 1
TAIR|locus:2205200 - symbol:OTP82 "AT1G08070" species:370... 111 2.3e-05 1
TAIR|locus:2018668 - symbol:AT1G28690 species:3702 "Arabi... 109 2.3e-05 1
TAIR|locus:2054966 - symbol:AHG11 "ABA hypersensitive ger... 109 2.5e-05 1
TAIR|locus:2198811 - symbol:MEF3 "AT1G06140" species:3702... 109 2.6e-05 1
TAIR|locus:2007888 - symbol:AT1G17630 species:3702 "Arabi... 110 2.8e-05 1
TAIR|locus:2178188 - symbol:MEF7 "AT5G09950" species:3702... 111 3.2e-05 1
TAIR|locus:2206164 - symbol:AT1G31430 species:3702 "Arabi... 108 3.4e-05 1
TAIR|locus:2082886 - symbol:EMB2261 "embryo defective 226... 110 3.4e-05 1
TAIR|locus:2047017 - symbol:AT2G21090 "AT2G21090" species... 108 3.6e-05 1
TAIR|locus:2034456 - symbol:AT1G31920 species:3702 "Arabi... 108 3.6e-05 1
TAIR|locus:2130644 - symbol:AT4G15720 "AT4G15720" species... 108 3.7e-05 1
TAIR|locus:2198546 - symbol:AT1G20230 "AT1G20230" species... 109 3.8e-05 1
TAIR|locus:2127801 - symbol:AT4G32430 "AT4G32430" species... 109 3.8e-05 1
TAIR|locus:2124137 - symbol:DOT4 "DEFECTIVELY ORGANIZED T... 109 4.5e-05 1
TAIR|locus:2097410 - symbol:AT3G49740 species:3702 "Arabi... 108 4.7e-05 1
TAIR|locus:2057630 - symbol:AT2G33680 "AT2G33680" species... 107 5.9e-05 1
TAIR|locus:2059687 - symbol:AT2G17210 species:3702 "Arabi... 107 6.0e-05 1
TAIR|locus:2150936 - symbol:AT5G15340 species:3702 "Arabi... 106 6.2e-05 1
TAIR|locus:2039817 - symbol:AT2G39620 "AT2G39620" species... 107 7.0e-05 1
TAIR|locus:2130354 - symbol:AT4G14820 "AT4G14820" species... 106 7.5e-05 1
TAIR|locus:2056794 - symbol:REME1 "required for efficienc... 105 8.0e-05 1
TAIR|locus:4515103421 - symbol:AT4G19191 "AT4G19191" spec... 105 8.4e-05 1
TAIR|locus:2177537 - symbol:EMB3141 "AT5G50390" species:3... 105 9.2e-05 1
TAIR|locus:2102514 - symbol:AT3G56550 species:3702 "Arabi... 104 9.3e-05 1
TAIR|locus:2019130 - symbol:OTP87 "organelle transcript p... 106 9.7e-05 1
TAIR|locus:505006163 - symbol:AT1G32415 "AT1G32415" speci... 105 0.00010 1
TAIR|locus:2151501 - symbol:AT5G46460 species:3702 "Arabi... 104 0.00012 1
TAIR|locus:2027554 - symbol:AT1G56690 species:3702 "Arabi... 104 0.00012 1
TAIR|locus:2097365 - symbol:AT3G49710 "AT3G49710" species... 104 0.00012 1
TAIR|locus:2125899 - symbol:AT4G33170 species:3702 "Arabi... 105 0.00014 1
TAIR|locus:2144143 - symbol:AT5G06540 species:3702 "Arabi... 102 0.00017 1
TAIR|locus:2159602 - symbol:AT5G08510 "AT5G08510" species... 100 0.00021 1
TAIR|locus:2102852 - symbol:CRR2 "AT3G46790" species:3702... 101 0.00023 1
TAIR|locus:2154389 - symbol:LPA66 "LOW PSII ACCUMULATION ... 68 0.00024 2
TAIR|locus:2077878 - symbol:AT3G08820 "AT3G08820" species... 101 0.00024 1
WARNING: Descriptions of 23 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2049736 [details] [associations]
symbol:AT2G37320 "AT2G37320" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002685
GenomeReviews:CT485783_GR EMBL:AC005896 Gene3D:1.25.40.10
PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF12854
EMBL:BT010613 EMBL:AK175809 IPI:IPI00524790 PIR:C84791
RefSeq:NP_181269.1 UniGene:At.37440 UniGene:At.73229
ProteinModelPortal:Q9ZUT4 SMR:Q9ZUT4 PRIDE:Q9ZUT4
EnsemblPlants:AT2G37320.1 GeneID:818309 KEGG:ath:AT2G37320
GeneFarm:3674 TAIR:At2g37320 eggNOG:NOG269030 HOGENOM:HOG000070656
InParanoid:Q9ZUT4 OMA:CAATHVQ PhylomeDB:Q9ZUT4
ProtClustDB:CLSN2683975 Genevestigator:Q9ZUT4 Uniprot:Q9ZUT4
Length = 500
Score = 240 (89.5 bits), Expect = 1.4e-19, P = 1.4e-19
Identities = 43/79 (54%), Positives = 59/79 (74%)
Query: 3 VTSCGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNV 62
V SCG R+ R G+ + CLA++ GF+++VY+GSSL+ GE + YK+FE+MP RNV
Sbjct: 127 VRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVFEEMPERNV 186
Query: 63 VSWTAIIAAFAQEWEVDMC 81
VSWTA+I+ FAQEW VD+C
Sbjct: 187 VSWTAMISGFAQEWRVDIC 205
Score = 118 (46.6 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 21/72 (29%), Positives = 43/72 (59%)
Query: 3 VTSCGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNV 62
+++C + + G C + G + +++ +SLIS KCG+ D +++F++ ++V
Sbjct: 228 LSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDV 287
Query: 63 VSWTAIIAAFAQ 74
VSW ++IA +AQ
Sbjct: 288 VSWNSMIAGYAQ 299
>TAIR|locus:2121055 [details] [associations]
symbol:AT4G38010 "AT4G38010" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR002885 EMBL:CP002687
GenomeReviews:CT486007_GR EMBL:AL161592 PROSITE:PS51375
EMBL:AL035538 Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF12854
Pfam:PF13041 HOGENOM:HOG000237569 IPI:IPI00533264 PIR:T05628
RefSeq:NP_195514.1 UniGene:At.65469 ProteinModelPortal:Q9SZK1
SMR:Q9SZK1 PRIDE:Q9SZK1 EnsemblPlants:AT4G38010.1 GeneID:829957
KEGG:ath:AT4G38010 GeneFarm:4024 TAIR:At4g38010 eggNOG:NOG236748
InParanoid:Q9SZK1 OMA:DYGRWVH PhylomeDB:Q9SZK1
ProtClustDB:CLSN2685374 Genevestigator:Q9SZK1 Uniprot:Q9SZK1
Length = 559
Score = 164 (62.8 bits), Expect = 3.1e-11, P = 3.1e-11
Identities = 33/74 (44%), Positives = 46/74 (62%)
Query: 2 PV-TSCGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVR 60
PV +CG IR G Q + + GF ++YV +SL+ F G CGE+ + K+F +MPVR
Sbjct: 111 PVFKACGKFSGIREGKQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVR 170
Query: 61 NVVSWTAIIAAFAQ 74
+VVSWT II F +
Sbjct: 171 DVVSWTGIITGFTR 184
>TAIR|locus:2149664 [details] [associations]
symbol:MEF1 "mitochondrial RNA editing factor 1"
species:3702 "Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM] [GO:0016554 "cytidine to uridine editing"
evidence=IMP] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0016554 Gene3D:1.25.40.10
PROSITE:PS51375 EMBL:AB025606 Pfam:PF01535 TIGRFAMs:TIGR00756
Pfam:PF13041 HOGENOM:HOG000237570 IPI:IPI00534535
RefSeq:NP_200075.1 UniGene:At.55507 ProteinModelPortal:Q9LTF4
SMR:Q9LTF4 STRING:Q9LTF4 EnsemblPlants:AT5G52630.1 GeneID:835340
KEGG:ath:AT5G52630 GeneFarm:3327 TAIR:At5g52630 eggNOG:NOG282491
InParanoid:Q9LTF4 OMA:NLGIWNA ProtClustDB:CLSN2686108
Genevestigator:Q9LTF4 Uniprot:Q9LTF4
Length = 588
Score = 159 (61.0 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 30/73 (41%), Positives = 46/73 (63%)
Query: 5 SCGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNVVS 64
SC G CL++++G+ A+V+VGSSL+ KCGE + KMF++MP RNVV+
Sbjct: 125 SCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVT 184
Query: 65 WTAIIAAFAQEWE 77
W+ ++ +AQ E
Sbjct: 185 WSGMMYGYAQMGE 197
Score = 137 (53.3 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 25/72 (34%), Positives = 46/72 (63%)
Query: 3 VTSCGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNV 62
++ C ++ + G Q L+++S F ++ +VGSSL+S KCG Y++F ++PV+N+
Sbjct: 224 ISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNL 283
Query: 63 VSWTAIIAAFAQ 74
W A++ A+AQ
Sbjct: 284 GIWNAMLKAYAQ 295
>TAIR|locus:2058812 [details] [associations]
symbol:AT2G02750 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:1.25.40.10 PROSITE:PS51375 EMBL:AC002521 Pfam:PF01535
TIGRFAMs:TIGR00756 EMBL:DQ446457 EMBL:DQ652951 EMBL:BX821054
IPI:IPI00516808 PIR:T00853 RefSeq:NP_178378.1 UniGene:At.41460
UniGene:At.66386 ProteinModelPortal:Q1PFA6 SMR:Q1PFA6 PaxDb:Q1PFA6
PRIDE:Q1PFA6 EnsemblPlants:AT2G02750.1 GeneID:814804
KEGG:ath:AT2G02750 GeneFarm:3689 TAIR:At2g02750 eggNOG:NOG237882
HOGENOM:HOG000115618 InParanoid:A0MEI0 OMA:PDSATWN PhylomeDB:Q1PFA6
ProtClustDB:CLSN2683701 Genevestigator:Q1PFA6 Uniprot:Q1PFA6
Length = 613
Score = 158 (60.7 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 30/68 (44%), Positives = 45/68 (66%)
Query: 7 GSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNVVSWT 66
G +I GG Q CLA++SGF VYVG+SL+S +CGE + +MFEK+P ++VV++
Sbjct: 140 GGCGDIEGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYN 199
Query: 67 AIIAAFAQ 74
A I+ +
Sbjct: 200 AFISGLME 207
Score = 98 (39.6 bits), Expect = 0.00044, P = 0.00044
Identities = 21/69 (30%), Positives = 37/69 (53%)
Query: 3 VTSCGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMP-VRN 61
+T+C S N++ G Q L ++ F VG++LI KC Y +F ++ RN
Sbjct: 238 ITACASLLNLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRN 297
Query: 62 VVSWTAIIA 70
++SW ++I+
Sbjct: 298 LISWNSVIS 306
>TAIR|locus:2205425 [details] [associations]
symbol:AT1G68930 "AT1G68930" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002684
GenomeReviews:CT485782_GR Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AC011665 Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041
IPI:IPI00528975 PIR:H96713 RefSeq:NP_177059.1 UniGene:At.52442
ProteinModelPortal:Q9CAA8 SMR:Q9CAA8 EnsemblPlants:AT1G68930.1
GeneID:843226 KEGG:ath:AT1G68930 GeneFarm:3231 TAIR:At1g68930
eggNOG:NOG300864 HOGENOM:HOG000237570 InParanoid:Q9CAA8 OMA:EEGAQFH
PhylomeDB:Q9CAA8 ProtClustDB:CLSN2682344 Genevestigator:Q9CAA8
Uniprot:Q9CAA8
Length = 743
Score = 154 (59.3 bits), Expect = 5.7e-10, P = 5.7e-10
Identities = 27/72 (37%), Positives = 49/72 (68%)
Query: 3 VTSCGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNV 62
+++C + ++ G+Q+ A+ SG + V V +SL++ GKCG+ D ++F +M VR+
Sbjct: 378 ISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDA 437
Query: 63 VSWTAIIAAFAQ 74
VSWTA+++A+AQ
Sbjct: 438 VSWTAMVSAYAQ 449
Score = 122 (48.0 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 26/71 (36%), Positives = 41/71 (57%)
Query: 5 SCGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYK-MFEKMPVRNVV 63
+CG I G Q +R+ F ++YVGS+LI KC + + K +F++M +NVV
Sbjct: 279 ACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKC-KCLHYAKTVFDRMKQKNVV 337
Query: 64 SWTAIIAAFAQ 74
SWTA++ + Q
Sbjct: 338 SWTAMVVGYGQ 348
>TAIR|locus:2151694 [details] [associations]
symbol:AT5G37570 "AT5G37570" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:1.25.40.10 PROSITE:PS51375
Pfam:PF01535 TIGRFAMs:TIGR00756 EMBL:AB018107 Pfam:PF13041
HOGENOM:HOG000237569 IPI:IPI00533371 RefSeq:NP_198573.1
UniGene:At.65593 ProteinModelPortal:Q9FHR3 SMR:Q9FHR3
EnsemblPlants:AT5G37570.1 GeneID:833735 KEGG:ath:AT5G37570
GeneFarm:4038 TAIR:At5g37570 eggNOG:NOG280404 InParanoid:Q9FHR3
OMA:LIDMNAK PhylomeDB:Q9FHR3 ProtClustDB:CLSN2686926
Genevestigator:Q9FHR3 Uniprot:Q9FHR3
Length = 550
Score = 152 (58.6 bits), Expect = 5.9e-10, P = 5.9e-10
Identities = 28/74 (37%), Positives = 44/74 (59%)
Query: 6 CGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNVVSW 65
C + +R G+ L +R GF +V VG+S + F GKC + K+F +MP RN VSW
Sbjct: 120 CSNNGQVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSW 179
Query: 66 TAIIAAFAQEWEVD 79
TA++ A+ + E++
Sbjct: 180 TALVVAYVKSGELE 193
>TAIR|locus:2054131 [details] [associations]
symbol:SLO2 "AT2G13600" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM;IDA] [GO:0010182 "sugar mediated
signaling pathway" evidence=IMP] [GO:0080156 "mitochondrial mRNA
modification" evidence=IMP] InterPro:IPR011990 InterPro:IPR002885
GO:GO:0005739 EMBL:CP002685 GenomeReviews:CT485783_GR EMBL:AC007063
GO:GO:0010182 Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535
TIGRFAMs:TIGR00756 Pfam:PF13041 HOGENOM:HOG000237570 GO:GO:0080156
IPI:IPI00529256 PIR:H84508 RefSeq:NP_178983.1 UniGene:At.52726
ProteinModelPortal:Q9SIT7 SMR:Q9SIT7 EnsemblPlants:AT2G13600.1
GeneID:815845 KEGG:ath:AT2G13600 GeneFarm:3687 TAIR:At2g13600
eggNOG:NOG311224 InParanoid:Q9SIT7 OMA:GFAQHDR PhylomeDB:Q9SIT7
ProtClustDB:CLSN2683340 Genevestigator:Q9SIT7 Uniprot:Q9SIT7
Length = 697
Score = 148 (57.2 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 26/72 (36%), Positives = 44/72 (61%)
Query: 3 VTSCGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNV 62
+++C ++ G Q L +S F+++VY+GS+L+ KCG D ++F++M RNV
Sbjct: 159 LSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNV 218
Query: 63 VSWTAIIAAFAQ 74
VSW ++I F Q
Sbjct: 219 VSWNSLITCFEQ 230
Score = 103 (41.3 bits), Expect = 0.00015, P = 0.00015
Identities = 23/51 (45%), Positives = 32/51 (62%)
Query: 24 RSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNVVSWTAIIAAFAQ 74
+SG +++VG+SLI KCG + Y +F KM R+ VSW A+I FAQ
Sbjct: 420 QSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQ 470
Score = 101 (40.6 bits), Expect = 0.00025, P = 0.00025
Identities = 16/52 (30%), Positives = 31/52 (59%)
Query: 23 VRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNVVSWTAIIAAFAQ 74
++SGF +++ + LI KCG D ++F+KMP RN+ +W +++ +
Sbjct: 47 IKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTK 98
>TAIR|locus:2011892 [details] [associations]
symbol:AT1G50270 "AT1G50270" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0007059 "chromosome segregation" evidence=RCA]
[GO:0007062 "sister chromatid cohesion" evidence=RCA] [GO:0007129
"synapsis" evidence=RCA] [GO:0007131 "reciprocal meiotic
recombination" evidence=RCA] [GO:0009887 "organ morphogenesis"
evidence=RCA] [GO:0009888 "tissue development" evidence=RCA]
[GO:0010638 "positive regulation of organelle organization"
evidence=RCA] [GO:0033044 "regulation of chromosome organization"
evidence=RCA] [GO:0042138 "meiotic DNA double-strand break
formation" evidence=RCA] [GO:0045132 "meiotic chromosome
segregation" evidence=RCA] InterPro:IPR011990 InterPro:IPR002885
EMBL:CP002684 GenomeReviews:CT485782_GR Gene3D:1.25.40.10
PROSITE:PS51375 Pfam:PF01535 Pfam:PF13812 TIGRFAMs:TIGR00756
EMBL:AC007980 Pfam:PF13041 HOGENOM:HOG000237569 EMBL:AK229256
IPI:IPI00525612 PIR:A96539 RefSeq:NP_175445.1 UniGene:At.23103
UniGene:At.68562 ProteinModelPortal:Q9SX45 PRIDE:Q9SX45
EnsemblPlants:AT1G50270.1 GeneID:841449 KEGG:ath:AT1G50270
GeneFarm:3610 TAIR:At1g50270 eggNOG:NOG310185 InParanoid:Q9SX45
OMA:HEFIAFD ProtClustDB:CLSN2682713 Genevestigator:Q9SX45
Uniprot:Q9SX45
Length = 596
Score = 145 (56.1 bits), Expect = 3.8e-09, P = 3.8e-09
Identities = 29/71 (40%), Positives = 44/71 (61%)
Query: 5 SCGSTRNIRGGTQYQCLAVRSGFV-ANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNVV 63
+ G ++R G L + +G V +V++GSSL+ GKC D K+F++MP RNVV
Sbjct: 213 AAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVV 272
Query: 64 SWTAIIAAFAQ 74
+WTA+IA + Q
Sbjct: 273 TWTALIAGYVQ 283
Score = 103 (41.3 bits), Expect = 0.00012, P = 0.00012
Identities = 20/71 (28%), Positives = 37/71 (52%)
Query: 3 VTSCGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNV 62
+++C + G + C +++ N G++LI KCG + +FE++ +NV
Sbjct: 313 LSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNV 372
Query: 63 VSWTAIIAAFA 73
+WTA+I FA
Sbjct: 373 YTWTAMINGFA 383
>TAIR|locus:2124603 [details] [associations]
symbol:AT4G18520 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR002885 EMBL:CP002687
GenomeReviews:CT486007_GR PROSITE:PS51375 EMBL:AL161548
Pfam:PF01535 TIGRFAMs:TIGR00756 EMBL:AL021710 EMBL:AK229394
IPI:IPI00785911 PIR:T04548 RefSeq:NP_193587.4 UniGene:At.32894
ProteinModelPortal:Q0WNP3 SMR:Q0WNP3 EnsemblPlants:AT4G18520.1
GeneID:827584 KEGG:ath:AT4G18520 GeneFarm:4288 TAIR:At4g18520
eggNOG:NOG297314 HOGENOM:HOG000077484 InParanoid:Q0WNP3 OMA:STLVWFY
PhylomeDB:Q0WNP3 ProtClustDB:CLSN2694120 Genevestigator:Q0WNP3
Uniprot:Q0WNP3
Length = 617
Score = 145 (56.1 bits), Expect = 4.0e-09, P = 4.0e-09
Identities = 30/71 (42%), Positives = 43/71 (60%)
Query: 5 SCGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNVVS 64
+C + +R G Q L V+ +V+VG+SL+ KCGE D K+F+ M RN V+
Sbjct: 293 ACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVT 352
Query: 65 WTAIIAAFAQE 75
WT+IIAA A+E
Sbjct: 353 WTSIIAAHARE 363
Score = 135 (52.6 bits), Expect = 4.8e-08, P = 4.8e-08
Identities = 24/66 (36%), Positives = 42/66 (63%)
Query: 5 SCGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNVVS 64
+CGS + G + +++ NVY+GS+L+ KCGE+ D + + +++P R+VVS
Sbjct: 394 ACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVS 453
Query: 65 WTAIIA 70
WTA+I+
Sbjct: 454 WTAMIS 459
Score = 131 (51.2 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 23/70 (32%), Positives = 45/70 (64%)
Query: 5 SCGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNVVS 64
+C ++ ++ G +A ++ ++NV+VGS+LI KCG + +++F+ MP +N+VS
Sbjct: 495 ACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVS 554
Query: 65 WTAIIAAFAQ 74
W A+I +A+
Sbjct: 555 WKAMIMGYAR 564
Score = 107 (42.7 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 24/70 (34%), Positives = 38/70 (54%)
Query: 6 CGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNVVSW 65
C G Q V+ G V N+ V SSL+ F +CGE + F+ M ++V+SW
Sbjct: 194 CSRRAEFELGRQVHGNMVKVG-VGNLIVESSLVYFYAQCGELTSALRAFDMMEEKDVISW 252
Query: 66 TAIIAAFAQE 75
TA+I+A +++
Sbjct: 253 TAVISACSRK 262
Score = 100 (40.3 bits), Expect = 0.00027, P = 0.00027
Identities = 17/42 (40%), Positives = 29/42 (69%)
Query: 31 VYVGSSLISFCGKCGENIDVYKMFEKMPVRNVVSWTAIIAAF 72
+Y G++LIS C + G+ + K+F+ MP +N V+WTA+I +
Sbjct: 117 IYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGY 158
>TAIR|locus:2040565 [details] [associations]
symbol:AT2G36730 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] InterPro:IPR002885
EMBL:CP002685 GenomeReviews:CT485783_GR PROSITE:PS51375
EMBL:AC006282 Pfam:PF01535 TIGRFAMs:TIGR00756 HOGENOM:HOG000237569
IPI:IPI00541658 PIR:A84784 RefSeq:NP_181211.1 UniGene:At.66328
ProteinModelPortal:Q9ZQA1 PaxDb:Q9ZQA1 PRIDE:Q9ZQA1
EnsemblPlants:AT2G36730.1 GeneID:818245 KEGG:ath:AT2G36730
GeneFarm:3668 TAIR:At2g36730 eggNOG:NOG273447 InParanoid:Q9ZQA1
OMA:YGAMVDI PhylomeDB:Q9ZQA1 ProtClustDB:CLSN2683944
Genevestigator:Q9ZQA1 Uniprot:Q9ZQA1
Length = 501
Score = 142 (55.0 bits), Expect = 6.1e-09, P = 6.1e-09
Identities = 27/78 (34%), Positives = 46/78 (58%)
Query: 5 SCGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNVVS 64
+C S + G Q Q ++ GF +VYVG++LI G C + D K+F++M RNVVS
Sbjct: 122 ACASFLGLTAGRQIQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVS 181
Query: 65 WTAIIAAFAQEWEVDMCY 82
W +I+ A + ++++ +
Sbjct: 182 WNSIMTALVENGKLNLVF 199
>TAIR|locus:2148101 [details] [associations]
symbol:AT5G16860 "AT5G16860" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:1.25.40.10 PROSITE:PS51375
Pfam:PF01535 Pfam:PF13812 TIGRFAMs:TIGR00756 EMBL:AL391141
Pfam:PF13041 HOGENOM:HOG000237570 IPI:IPI00533068 PIR:T51541
RefSeq:NP_197188.1 UniGene:At.54872 ProteinModelPortal:Q9LFL5
SMR:Q9LFL5 EnsemblPlants:AT5G16860.1 GeneID:831549
KEGG:ath:AT5G16860 GeneFarm:3540 TAIR:At5g16860 eggNOG:NOG251129
InParanoid:Q9LFL5 OMA:FTISCAL PhylomeDB:Q9LFL5
ProtClustDB:CLSN2686178 Genevestigator:Q9LFL5 Uniprot:Q9LFL5
Length = 850
Score = 143 (55.4 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 25/70 (35%), Positives = 47/70 (67%)
Query: 5 SCGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNVVS 64
+CG ++R G L++ +GF++NV+VG++L++ +C D K+F++M V +VVS
Sbjct: 136 ACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVS 195
Query: 65 WTAIIAAFAQ 74
W +II ++A+
Sbjct: 196 WNSIIESYAK 205
Score = 131 (51.2 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 27/73 (36%), Positives = 42/73 (57%)
Query: 2 PVTSCGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRN 61
P S G T ++ G Q C AV S + N++VG+ L+ KCG + +F M V++
Sbjct: 238 PCASLG-THSL--GKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKD 294
Query: 62 VVSWTAIIAAFAQ 74
VVSW A++A ++Q
Sbjct: 295 VVSWNAMVAGYSQ 307
>TAIR|locus:2057574 [details] [associations]
symbol:AT2G33760 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:1.25.40.10 PROSITE:PS51375 EMBL:U78721 Pfam:PF01535
Pfam:PF13812 TIGRFAMs:TIGR00756 Pfam:PF13041 HOGENOM:HOG000237569
IPI:IPI00521080 PIR:C84749 RefSeq:NP_180932.1 UniGene:At.66304
UniGene:At.68773 ProteinModelPortal:P93011 SMR:P93011
EnsemblPlants:AT2G33760.1 GeneID:817942 KEGG:ath:AT2G33760
GeneFarm:3149 TAIR:At2g33760 eggNOG:NOG259057 InParanoid:P93011
OMA:SPSNYTF PhylomeDB:P93011 ProtClustDB:CLSN2683510
Genevestigator:P93011 Uniprot:P93011
Length = 583
Score = 139 (54.0 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 25/77 (32%), Positives = 45/77 (58%)
Query: 3 VTSCGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNV 62
+ SC +R G C AV SGF + YV ++L++F KCG+ ++F++MP +++
Sbjct: 114 IKSCADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSI 173
Query: 63 VSWTAIIAAFAQEWEVD 79
V+W ++++ F Q D
Sbjct: 174 VAWNSLVSGFEQNGLAD 190
Score = 107 (42.7 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 21/70 (30%), Positives = 40/70 (57%)
Query: 3 VTSCGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNV 62
+++C T + G+ + G NV +G++LI+ +CG+ ++F+KM NV
Sbjct: 215 LSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNV 274
Query: 63 VSWTAIIAAF 72
+WTA+I+A+
Sbjct: 275 AAWTAMISAY 284
>TAIR|locus:2090857 [details] [associations]
symbol:AT3G26630 "AT3G26630" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR011990 InterPro:IPR002885 GO:GO:0009507 EMBL:CP002686
GenomeReviews:BA000014_GR Gene3D:1.25.40.10 PROSITE:PS51375
Pfam:PF01535 TIGRFAMs:TIGR00756 EMBL:X98130 EMBL:AB026648
Pfam:PF13041 EMBL:X97487 EMBL:AY099658 EMBL:BT000240
IPI:IPI00546010 RefSeq:NP_189297.1 UniGene:At.84
ProteinModelPortal:Q38959 SMR:Q38959 PaxDb:Q38959 PRIDE:Q38959
EnsemblPlants:AT3G26630.1 GeneID:822275 KEGG:ath:AT3G26630
GeneFarm:592 TAIR:At3g26630 eggNOG:NOG276835 HOGENOM:HOG000115630
InParanoid:Q38959 OMA:SIVSWTT PhylomeDB:Q38959
ProtClustDB:CLSN2684869 Genevestigator:Q38959 Uniprot:Q38959
Length = 455
Score = 136 (52.9 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 26/77 (33%), Positives = 48/77 (62%)
Query: 3 VTSCGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNV 62
+ +C ++ +IR GTQ LA+++GF +V+ ++L+ KCG+ K+F+KMP R++
Sbjct: 126 IKACLASSSIRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSI 185
Query: 63 VSWTAIIAAFAQEWEVD 79
VSWT ++ ++D
Sbjct: 186 VSWTTMLYGLVSNSQLD 202
>TAIR|locus:2078653 [details] [associations]
symbol:AT3G02010 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:1.25.40.10 PROSITE:PS51375 EMBL:AC011664 EMBL:AC010797
Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041 HOGENOM:HOG000237570
IPI:IPI00527957 RefSeq:NP_186850.1 UniGene:At.53156
ProteinModelPortal:Q9S7F4 SMR:Q9S7F4 PRIDE:Q9S7F4
EnsemblPlants:AT3G02010.1 GeneID:821085 KEGG:ath:AT3G02010
GeneFarm:3358 TAIR:At3g02010 eggNOG:NOG280481 InParanoid:Q9S7F4
OMA:PAYSWVE PhylomeDB:Q9S7F4 ProtClustDB:CLSN2685183
Genevestigator:Q9S7F4 Uniprot:Q9S7F4
Length = 825
Score = 139 (54.0 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 27/59 (45%), Positives = 36/59 (61%)
Query: 15 GTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNVVSWTAIIAAFA 73
G Q +RSG + NV+ GS L+ KCG D ++FE+MP RN VSW A+I+A A
Sbjct: 471 GKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHA 529
Score = 101 (40.6 bits), Expect = 0.00030, P = 0.00030
Identities = 20/65 (30%), Positives = 38/65 (58%)
Query: 11 NIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNVVSWTAIIA 70
+++ G Q C A+ + + ++VG+SL+ KC + +F+ +P R VSWTA+I+
Sbjct: 366 SLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALIS 425
Query: 71 AFAQE 75
+ Q+
Sbjct: 426 GYVQK 430
>TAIR|locus:2057986 [details] [associations]
symbol:AT2G36980 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 GO:GO:0005739 EMBL:CP002685
GenomeReviews:CT485783_GR EMBL:AC006922 Gene3D:1.25.40.10
PROSITE:PS51375 Pfam:PF01535 Pfam:PF13812 TIGRFAMs:TIGR00756
Pfam:PF13041 EMBL:AY461626 EMBL:AY461627 IPI:IPI00523229 PIR:A84787
RefSeq:NP_181235.1 UniGene:At.37481 ProteinModelPortal:Q9SJK9
SMR:Q9SJK9 EnsemblPlants:AT2G36980.1 GeneID:818272
KEGG:ath:AT2G36980 GeneFarm:3671 TAIR:At2g36980 eggNOG:NOG289031
HOGENOM:HOG000243248 InParanoid:Q9SJK9 OMA:LTQVSWN PhylomeDB:Q9SJK9
ProtClustDB:CLSN2683956 ArrayExpress:Q9SJK9 Genevestigator:Q9SJK9
Uniprot:Q9SJK9
Length = 625
Score = 136 (52.9 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 28/79 (35%), Positives = 49/79 (62%)
Query: 3 VTSCGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKM--PVR 60
+++C S N++ G + Q L +RSGF A++ V +SLI GKC + + K+F M R
Sbjct: 77 LSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCDSR 136
Query: 61 NVVSWTAIIAAF--AQEWE 77
N V+W +++ A+ A+++E
Sbjct: 137 NEVTWCSLLFAYMNAEQFE 155
>TAIR|locus:2154965 [details] [associations]
symbol:AT5G66500 "AT5G66500" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR002885 GO:GO:0005739 EMBL:CP002688
GenomeReviews:BA000015_GR PROSITE:PS51375 Pfam:PF01535 Pfam:PF13812
TIGRFAMs:TIGR00756 EMBL:AB013389 Pfam:PF13041 HOGENOM:HOG000237569
EMBL:BX832684 IPI:IPI00521956 RefSeq:NP_201451.1 UniGene:At.49810
UniGene:At.75650 ProteinModelPortal:Q9FJY9 SMR:Q9FJY9 PRIDE:Q9FJY9
EnsemblPlants:AT5G66500.1 GeneID:836782 KEGG:ath:AT5G66500
GeneFarm:4202 TAIR:At5g66500 eggNOG:NOG277507 InParanoid:Q9FJY9
OMA:TSMIDAY PhylomeDB:Q9FJY9 ProtClustDB:CLSN2686843
Genevestigator:Q9FJY9 Uniprot:Q9FJY9
Length = 532
Score = 134 (52.2 bits), Expect = 4.9e-08, P = 4.9e-08
Identities = 24/71 (33%), Positives = 44/71 (61%)
Query: 3 VTSCGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNV 62
+ C ++ G Q C+A+R+GFV++ + + L+ GKCG+ + +F +P ++V
Sbjct: 288 LAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSV 347
Query: 63 VSWTAIIAAFA 73
VSWT++I A+A
Sbjct: 348 VSWTSMIDAYA 358
>TAIR|locus:2167593 [details] [associations]
symbol:AT5G44230 species:3702 "Arabidopsis thaliana"
[GO:0009507 "chloroplast" evidence=ISM] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002688 GenomeReviews:BA000015_GR
EMBL:AB005239 Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535
TIGRFAMs:TIGR00756 Pfam:PF13041 HOGENOM:HOG000237569 EMBL:DQ447037
IPI:IPI00540587 RefSeq:NP_199236.1 UniGene:At.55349
ProteinModelPortal:Q9FFG8 SMR:Q9FFG8 EnsemblPlants:AT5G44230.1
GeneID:834446 KEGG:ath:AT5G44230 GeneFarm:3182 TAIR:At5g44230
eggNOG:NOG302114 InParanoid:Q9FFG8 OMA:VISWTEL PhylomeDB:Q9FFG8
ProtClustDB:CLSN2687233 Genevestigator:Q9FFG8 Uniprot:Q9FFG8
Length = 657
Score = 135 (52.6 bits), Expect = 5.2e-08, P = 5.2e-08
Identities = 30/72 (41%), Positives = 48/72 (66%)
Query: 5 SCGSTRNIRGGTQYQCLAVR-SGFVANVYVGSSLISFCGKCGENID-VYKMFEKMPVRNV 62
+CG+ +++ G Q+ R GF VYVG+++I KC E+ID K+F++MP R+V
Sbjct: 158 ACGTMKDLNLGRQFHAQTFRLRGFCF-VYVGNTMIDMYVKC-ESIDCARKVFDEMPERDV 215
Query: 63 VSWTAIIAAFAQ 74
+SWT +IAA+A+
Sbjct: 216 ISWTELIAAYAR 227
>TAIR|locus:4010713895 [details] [associations]
symbol:AT4G21065 "AT4G21065" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002687
GenomeReviews:CT486007_GR EMBL:AL080282 EMBL:AL161554
Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756
Pfam:PF13041 HOGENOM:HOG000237569 EMBL:BX826462 EMBL:BX827021
IPI:IPI00846696 IPI:IPI00921709 PIR:A85240 PIR:T10649
RefSeq:NP_001078414.1 RefSeq:NP_001078415.1 UniGene:At.49734
ProteinModelPortal:A8MQA3 SMR:A8MQA3 PRIDE:A8MQA3
EnsemblPlants:AT4G21065.1 GeneID:5008150 KEGG:ath:AT4G21065
GeneFarm:3325 TAIR:At4g21065 eggNOG:NOG242330 OMA:PDTHTYP
PhylomeDB:A8MQA3 ProtClustDB:CLSN2699103 Genevestigator:A8MQA3
Uniprot:A8MQA3
Length = 595
Score = 134 (52.2 bits), Expect = 5.8e-08, P = 5.8e-08
Identities = 23/64 (35%), Positives = 41/64 (64%)
Query: 11 NIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNVVSWTAIIA 70
++R G + +RSGF + +YV +SL+ CG+ YK+F+KMP +++V+W ++I
Sbjct: 136 DVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVIN 195
Query: 71 AFAQ 74
FA+
Sbjct: 196 GFAE 199
>TAIR|locus:2098901 [details] [associations]
symbol:AT3G61170 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002686 GenomeReviews:BA000014_GR
EMBL:AL137898 Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535
Pfam:PF13812 TIGRFAMs:TIGR00756 Pfam:PF13041 HOGENOM:HOG000237570
UniGene:At.172 IPI:IPI00530191 PIR:T47909 RefSeq:NP_191676.1
UniGene:At.54031 ProteinModelPortal:Q9M2E7 SMR:Q9M2E7 PRIDE:Q9M2E7
EnsemblPlants:AT3G61170.1 GeneID:825289 KEGG:ath:AT3G61170
TAIR:At3g61170 InParanoid:Q9M2E7 OMA:NSMIVGC PhylomeDB:Q9M2E7
ProtClustDB:CLSN2685238 Genevestigator:Q9M2E7 Uniprot:Q9M2E7
Length = 783
Score = 135 (52.6 bits), Expect = 6.6e-08, P = 6.6e-08
Identities = 28/73 (38%), Positives = 39/73 (53%)
Query: 3 VTSCGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNV 62
+T+C S R G Q C V+SGF N+YV S+LI KC E + E M V +V
Sbjct: 234 LTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDV 293
Query: 63 VSWTAIIAAFAQE 75
VSW ++I ++
Sbjct: 294 VSWNSMIVGCVRQ 306
Score = 105 (42.0 bits), Expect = 0.00011, P = 0.00011
Identities = 19/60 (31%), Positives = 36/60 (60%)
Query: 15 GTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNVVSWTAIIAAFAQ 74
G Q ++SGF +++ V +SL++ KCG D +F M +R++++WT +I +A+
Sbjct: 449 GQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLITWTCLIVGYAK 508
>TAIR|locus:2062939 [details] [associations]
symbol:AT2G46050 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 GO:GO:0005739 EMBL:CP002685
GenomeReviews:CT485783_GR Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AC005397 Pfam:PF01535 TIGRFAMs:TIGR00756 IPI:IPI00535852
PIR:B84898 RefSeq:NP_182129.1 UniGene:At.65051
ProteinModelPortal:O82363 SMR:O82363 PRIDE:O82363
EnsemblPlants:AT2G46050.1 GeneID:819213 KEGG:ath:AT2G46050
GeneFarm:3686 TAIR:At2g46050 eggNOG:NOG298418 HOGENOM:HOG000242240
InParanoid:O82363 OMA:QHLACLV PhylomeDB:O82363
ProtClustDB:CLSN2683448 Genevestigator:O82363 Uniprot:O82363
Length = 590
Score = 133 (51.9 bits), Expect = 7.3e-08, P = 7.3e-08
Identities = 22/77 (28%), Positives = 45/77 (58%)
Query: 6 CGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNVVSW 65
C + N++ G Q CL V+ G ++ + +SL+ F GKCG ++ ++FE + R++V W
Sbjct: 152 CTDSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLW 211
Query: 66 TAIIAAFAQEWEVDMCY 82
A+++++ +D +
Sbjct: 212 NALVSSYVLNGMIDEAF 228
Score = 105 (42.0 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 24/70 (34%), Positives = 35/70 (50%)
Query: 8 STRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNVVSWTA 67
S I G Q + + + ++ V ++L++ K D + FE M VRNVVSW A
Sbjct: 253 SACRIEQGKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVRNVVSWNA 312
Query: 68 IIAAFAQEWE 77
+I FAQ E
Sbjct: 313 MIVGFAQNGE 322
>TAIR|locus:2020703 [details] [associations]
symbol:AT1G03540 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002684 GenomeReviews:CT485782_GR
EMBL:AC002560 Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535
TIGRFAMs:TIGR00756 Pfam:PF13041 EMBL:DQ446225 IPI:IPI00544838
PIR:T00904 RefSeq:NP_171853.1 UniGene:At.51470
ProteinModelPortal:Q9LR69 SMR:Q9LR69 PRIDE:Q9LR69
EnsemblPlants:AT1G03540.1 GeneID:839466 KEGG:ath:AT1G03540
GeneFarm:3641 TAIR:At1g03540 eggNOG:NOG295682 HOGENOM:HOG000241954
InParanoid:Q9LR69 OMA:LGGYCQN PhylomeDB:Q9LR69
ProtClustDB:CLSN2679681 Genevestigator:Q9LR69 Uniprot:Q9LR69
Length = 609
Score = 132 (51.5 bits), Expect = 9.8e-08, P = 9.8e-08
Identities = 25/75 (33%), Positives = 43/75 (57%)
Query: 3 VTSCGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNV 62
+T+CG+ R ++ G + + +G +NV V SSL+ GKCG + ++F M +N
Sbjct: 272 LTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNS 331
Query: 63 VSWTAIIAAFAQEWE 77
VSW+A++ + Q E
Sbjct: 332 VSWSALLGGYCQNGE 346
Score = 113 (44.8 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 25/80 (31%), Positives = 41/80 (51%)
Query: 5 SCGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNVVS 64
+C +R G + VR G NV V S+LI GK G +++ KM +RN+++
Sbjct: 371 ACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMIT 430
Query: 65 WTAIIAAFAQEWEVDMCYTF 84
W A+++A AQ + +F
Sbjct: 431 WNAMLSALAQNGRGEEAVSF 450
Score = 112 (44.5 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 21/72 (29%), Positives = 41/72 (56%)
Query: 3 VTSCGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNV 62
V +C +R G + + + GF N ++ S+L G E +D ++F++MP +V
Sbjct: 170 VKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDV 229
Query: 63 VSWTAIIAAFAQ 74
+ WTA+++AF++
Sbjct: 230 ICWTAVLSAFSK 241
>TAIR|locus:2096299 [details] [associations]
symbol:AT3G05340 "AT3G05340" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002686
GenomeReviews:BA000014_GR Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AC009177 Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041
HOGENOM:HOG000237570 IPI:IPI00546900 RefSeq:NP_187185.2
UniGene:At.49589 UniGene:At.65776 ProteinModelPortal:Q9MA85
SMR:Q9MA85 EnsemblPlants:AT3G05340.1 GeneID:819698
KEGG:ath:AT3G05340 GeneFarm:3700 TAIR:At3g05340 eggNOG:NOG237313
InParanoid:Q9MA85 OMA:FARHGHG PhylomeDB:Q9MA85
ProtClustDB:CLSN2680820 Genevestigator:Q9MA85 Uniprot:Q9MA85
Length = 658
Score = 132 (51.5 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 25/60 (41%), Positives = 36/60 (60%)
Query: 15 GTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNVVSWTAIIAAFAQ 74
G Q L ++ F N +V + LI+ KCG+ D +F +MP RN VSW ++IAAFA+
Sbjct: 376 GKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFAR 435
Score = 96 (38.9 bits), Expect = 0.00078, P = 0.00078
Identities = 17/53 (32%), Positives = 32/53 (60%)
Query: 33 VGSSLISFCGKCGENIDVYKMFEKMPVRNVVSWTAIIAAFAQEWEVDMCYTFI 85
V +SL+S KCG+ +D K+F++MP+R+V+S + F + E + + +
Sbjct: 92 VWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLL 144
>TAIR|locus:2100392 [details] [associations]
symbol:AT3G47840 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002686 GenomeReviews:BA000014_GR
EMBL:AL049746 Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535
TIGRFAMs:TIGR00756 Pfam:PF13041 HOGENOM:HOG000237570
IPI:IPI00525955 PIR:T07723 RefSeq:NP_190368.1 UniGene:At.53826
ProteinModelPortal:Q9STS9 SMR:Q9STS9 PaxDb:Q9STS9 PRIDE:Q9STS9
EnsemblPlants:AT3G47840.1 GeneID:823940 KEGG:ath:AT3G47840
GeneFarm:3701 TAIR:At3g47840 eggNOG:NOG249488 InParanoid:Q9STS9
OMA:IKEPGWS PhylomeDB:Q9STS9 ProtClustDB:CLSN2684004
Genevestigator:Q9STS9 Uniprot:Q9STS9
Length = 706
Score = 132 (51.5 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 26/65 (40%), Positives = 40/65 (61%)
Query: 5 SCGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNVVS 64
+CG + NI G AV++ +++VYVGSSL+ + G+ ++F +MP RN V+
Sbjct: 117 ACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVT 176
Query: 65 WTAII 69
WTAII
Sbjct: 177 WTAII 181
Score = 122 (48.0 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 29/82 (35%), Positives = 43/82 (52%)
Query: 5 SCGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNVVS 64
+C R ++ G + GFV + V +SL + +CGE D +FE M R+VVS
Sbjct: 218 ACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVS 277
Query: 65 WTAIIAAFAQ-EWEVDMCYTFI 85
WT++I A+ + EV TFI
Sbjct: 278 WTSLIVAYKRIGQEVKAVETFI 299
Score = 98 (39.6 bits), Expect = 0.00052, P = 0.00052
Identities = 18/71 (25%), Positives = 35/71 (49%)
Query: 4 TSCGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNVV 63
++C S + G Q C + G ++ V +S++ CG + +F+ M R+++
Sbjct: 318 SACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDII 377
Query: 64 SWTAIIAAFAQ 74
SW+ II + Q
Sbjct: 378 SWSTIIGGYCQ 388
>TAIR|locus:2122551 [details] [associations]
symbol:AT4G39530 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:1.25.40.10 PROSITE:PS51375 EMBL:AL161595 EMBL:AL078620
Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041 HOGENOM:HOG000237570
IPI:IPI00521091 PIR:T09369 RefSeq:NP_195663.1 UniGene:At.65474
ProteinModelPortal:Q9SVA5 SMR:Q9SVA5 PRIDE:Q9SVA5
EnsemblPlants:AT4G39530.1 GeneID:830107 KEGG:ath:AT4G39530
GeneFarm:4025 TAIR:At4g39530 eggNOG:NOG291774 InParanoid:Q9SVA5
OMA:VHAYTIK PhylomeDB:Q9SVA5 ProtClustDB:CLSN2685697
Genevestigator:Q9SVA5 Uniprot:Q9SVA5
Length = 834
Score = 131 (51.2 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 22/75 (29%), Positives = 43/75 (57%)
Query: 3 VTSCGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNV 62
VT+ G+ +++ G ++ C ++ G N Y+ ++L+ KCG D +K F+ R+V
Sbjct: 562 VTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDV 621
Query: 63 VSWTAIIAAFAQEWE 77
V W ++I+++A E
Sbjct: 622 VCWNSVISSYANHGE 636
Score = 108 (43.1 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 21/72 (29%), Positives = 38/72 (52%)
Query: 3 VTSCGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNV 62
+++C + GG Q +R G + + + LI KCG I +K+F MP +N+
Sbjct: 256 LSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNI 315
Query: 63 VSWTAIIAAFAQ 74
+SWT +++ + Q
Sbjct: 316 ISWTTLLSGYKQ 327
Score = 105 (42.0 bits), Expect = 0.00011, P = 0.00011
Identities = 24/55 (43%), Positives = 36/55 (65%)
Query: 17 QYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKM-FEKMPVRNVVSWTAIIA 70
Q Q V+SGF +VYVG+ LI F K G NID ++ F+ +P ++ V+WT +I+
Sbjct: 169 QLQSFLVKSGFDRDVYVGTLLIDFYLKDG-NIDYARLVFDALPEKSTVTWTTMIS 222
>TAIR|locus:2013079 [details] [associations]
symbol:AT1G19720 "AT1G19720" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005634 GO:GO:0009507 Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AC007797 EMBL:AC024609 Pfam:PF01535 TIGRFAMs:TIGR00756
Pfam:PF13041 HOGENOM:HOG000237570 EMBL:AK229137 EMBL:AJ006040
IPI:IPI00522498 PIR:C86330 PIR:T52647 RefSeq:NP_173402.2
UniGene:At.16215 ProteinModelPortal:Q9FXH1 SMR:Q9FXH1 PaxDb:Q9FXH1
PRIDE:Q9FXH1 EnsemblPlants:AT1G19720.1 GeneID:838561
KEGG:ath:AT1G19720 GeneFarm:3162 TAIR:At1g19720 eggNOG:NOG325213
InParanoid:Q9FXH1 OMA:TWNIMIS PhylomeDB:Q9FXH1
ProtClustDB:CLSN2680057 Genevestigator:Q9FXH1 Uniprot:Q9FXH1
Length = 894
Score = 131 (51.2 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 23/72 (31%), Positives = 44/72 (61%)
Query: 3 VTSCGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNV 62
V++C + I G++ +AV+ GF+ +V VG+SL+ KCG+ D K+F+ + ++V
Sbjct: 359 VSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDV 418
Query: 63 VSWTAIIAAFAQ 74
+W ++I + Q
Sbjct: 419 YTWNSMITGYCQ 430
Score = 98 (39.6 bits), Expect = 0.00069, P = 0.00069
Identities = 17/69 (24%), Positives = 37/69 (53%)
Query: 6 CGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNVVSW 65
C + ++ G + ++ G + + V +S+++ KCGE K F +M R+V++W
Sbjct: 191 CANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAW 250
Query: 66 TAIIAAFAQ 74
+++ A+ Q
Sbjct: 251 NSVLLAYCQ 259
Score = 98 (39.6 bits), Expect = 0.00069, P = 0.00069
Identities = 25/73 (34%), Positives = 41/73 (56%)
Query: 5 SCGSTRNIRGGTQYQCLAVRSGFVA--NVYVGSSLISFCGKCGENIDVYKMFEKMPVRNV 62
SC + +I G + L R G +V+V + L+S KCG D K+F+ M RN+
Sbjct: 90 SCIDSGSIHLG---RILHARFGLFTEPDVFVETKLLSMYAKCGCIADARKVFDSMRERNL 146
Query: 63 VSWTAIIAAFAQE 75
+W+A+I A+++E
Sbjct: 147 FTWSAMIGAYSRE 159
>TAIR|locus:2032840 [details] [associations]
symbol:AT1G16480 "AT1G16480" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002684
Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756
Pfam:PF13041 IPI:IPI00519279 RefSeq:NP_173097.2 UniGene:At.11325
ProteinModelPortal:F4I4G1 SMR:F4I4G1 EnsemblPlants:AT1G16480.1
GeneID:838218 KEGG:ath:AT1G16480 OMA:DEEQKEH ArrayExpress:F4I4G1
Uniprot:F4I4G1
Length = 937
Score = 130 (50.8 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 27/76 (35%), Positives = 47/76 (61%)
Query: 3 VTSCGSTRNI-RGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRN 61
VT+CG + ++ R G Q +SG +++VYV ++++ G G K+FE+MP RN
Sbjct: 65 VTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRN 124
Query: 62 VVSWTAIIAAFAQEWE 77
VVSWT+++ ++ + E
Sbjct: 125 VVSWTSLMVGYSDKGE 140
Score = 116 (45.9 bits), Expect = 8.8e-06, P = 8.8e-06
Identities = 27/78 (34%), Positives = 45/78 (57%)
Query: 3 VTSCGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYK-MFEKMPVRN 61
++SCG ++ G Q V+SG + + V +SLIS G G N+D +F++M R+
Sbjct: 167 ISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMG-NVDYANYIFDQMSERD 225
Query: 62 VVSWTAIIAAFAQEWEVD 79
+SW +I AA+AQ ++
Sbjct: 226 TISWNSIAAAYAQNGHIE 243
Score = 110 (43.8 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 22/59 (37%), Positives = 37/59 (62%)
Query: 21 LAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNVVSWTAIIAAFAQEWEVD 79
L V SG N +G++L+S GK GE + ++ +MP R+VV+W A+I +A++ + D
Sbjct: 387 LVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPD 445
>TAIR|locus:505006130 [details] [associations]
symbol:AT1G18485 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0016556 "mRNA modification"
evidence=RCA] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002684
GenomeReviews:CT485782_GR Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AC013354 Pfam:PF01535 Pfam:PF13812 TIGRFAMs:TIGR00756
Pfam:PF13041 HOGENOM:HOG000237570 EMBL:AK229592 IPI:IPI00532648
PIR:E86318 RefSeq:NP_564054.1 UniGene:At.28671
ProteinModelPortal:Q0WN60 SMR:Q0WN60 PaxDb:Q0WN60 PRIDE:Q0WN60
EnsemblPlants:AT1G18485.1 GeneID:838429 KEGG:ath:AT1G18485
GeneFarm:3163 TAIR:At1g18485 eggNOG:NOG308609 OMA:CVIKACA
PhylomeDB:Q0WN60 ProtClustDB:CLSN2687856 ArrayExpress:Q0WN60
Genevestigator:Q0WN60 Uniprot:Q0WN60
Length = 970
Score = 130 (50.8 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 25/71 (35%), Positives = 43/71 (60%)
Query: 3 VTSCGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNV 62
+ +C ++ G L V++G V +V+VG++L+SF G G D ++F+ MP RN+
Sbjct: 194 IKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNL 253
Query: 63 VSWTAIIAAFA 73
VSW ++I F+
Sbjct: 254 VSWNSMIRVFS 264
>TAIR|locus:2131631 [details] [associations]
symbol:AT4G35130 "AT4G35130" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0009507
"chloroplast" evidence=ISM] InterPro:IPR011990 InterPro:IPR002885
GO:GO:0009507 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:1.25.40.10 EMBL:AL022023 EMBL:AL161586 PROSITE:PS51375
Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041 HOGENOM:HOG000237570
IPI:IPI00533040 PIR:T05783 RefSeq:NP_195239.1 UniGene:At.65456
ProteinModelPortal:O49619 SMR:O49619 PRIDE:O49619
EnsemblPlants:AT4G35130.1 GeneID:829665 KEGG:ath:AT4G35130
GeneFarm:3322 TAIR:At4g35130 eggNOG:NOG324832 InParanoid:O49619
OMA:HDNTGCY PhylomeDB:O49619 ProtClustDB:CLSN2685935
Genevestigator:O49619 Uniprot:O49619
Length = 804
Score = 127 (49.8 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 25/70 (35%), Positives = 43/70 (61%)
Query: 3 VTSCGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNV 62
+ S ++ G + + ++ GFV++VYV +SLIS K G D K+FE+MP R++
Sbjct: 137 IKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDI 196
Query: 63 VSWTAIIAAF 72
VSW ++I+ +
Sbjct: 197 VSWNSMISGY 206
Score = 111 (44.1 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 20/53 (37%), Positives = 36/53 (67%)
Query: 22 AVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNVVSWTAIIAAFAQ 74
A+R GF+ ++ + ++LI G+CG+ +F++M +NV+SW +IIAA+ Q
Sbjct: 356 AMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQ 408
>TAIR|locus:2095289 [details] [associations]
symbol:AT3G09040 "AT3G09040" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 GO:GO:0005739
EMBL:CP002686 GenomeReviews:BA000014_GR Gene3D:1.25.40.10
PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756 EMBL:AC009326
Pfam:PF13041 HOGENOM:HOG000237570 IPI:IPI00542229
RefSeq:NP_187516.1 UniGene:At.40178 ProteinModelPortal:Q9SS83
SMR:Q9SS83 PRIDE:Q9SS83 EnsemblPlants:AT3G09040.1 GeneID:820057
KEGG:ath:AT3G09040 GeneFarm:3706 TAIR:At3g09040 eggNOG:NOG256475
InParanoid:Q9SS83 OMA:CRIHGDD PhylomeDB:Q9SS83
ProtClustDB:CLSN2684968 Genevestigator:Q9SS83 Uniprot:Q9SS83
Length = 1028
Score = 127 (49.8 bits), Expect = 6.6e-07, P = 6.6e-07
Identities = 20/73 (27%), Positives = 45/73 (61%)
Query: 3 VTSCGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNV 62
+++C ++ ++ G+Q+ + ++ N++VG++L+ KCG D ++FE+M R+
Sbjct: 435 LSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDN 494
Query: 63 VSWTAIIAAFAQE 75
V+W II ++ Q+
Sbjct: 495 VTWNTIIGSYVQD 507
Score = 125 (49.1 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 26/70 (37%), Positives = 39/70 (55%)
Query: 5 SCGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNVVS 64
+C + G Q CL+V+ G +++ GSSLI KCG D K+F +P +VVS
Sbjct: 538 ACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVS 597
Query: 65 WTAIIAAFAQ 74
A+IA ++Q
Sbjct: 598 MNALIAGYSQ 607
Score = 118 (46.6 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 25/75 (33%), Positives = 40/75 (53%)
Query: 3 VTSCGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNV 62
+++ G N+ G A++ G +N+YVGSSL+S KC + K+FE + +N
Sbjct: 334 LSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKND 393
Query: 63 VSWTAIIAAFAQEWE 77
V W A+I +A E
Sbjct: 394 VFWNAMIRGYAHNGE 408
Score = 108 (43.1 bits), Expect = 7.0e-05, P = 7.0e-05
Identities = 19/72 (26%), Positives = 34/72 (47%)
Query: 3 VTSCGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNV 62
+++C N+ G Q C ++ G N Y G +L+ KC D ++FE + N
Sbjct: 167 LSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNT 226
Query: 63 VSWTAIIAAFAQ 74
V WT + + + +
Sbjct: 227 VCWTCLFSGYVK 238
>TAIR|locus:2091546 [details] [associations]
symbol:AT3G13770 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 GO:GO:0005739 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AP001307 Gene3D:1.25.40.10
PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041
HOGENOM:HOG000237570 IPI:IPI00518949 RefSeq:NP_187990.1
UniGene:At.43032 UniGene:At.53299 ProteinModelPortal:Q9LIC3
SMR:Q9LIC3 EnsemblPlants:AT3G13770.1 GeneID:820586
KEGG:ath:AT3G13770 GeneFarm:3533 TAIR:At3g13770 eggNOG:NOG263023
InParanoid:Q9LIC3 OMA:NEFTFAT PhylomeDB:Q9LIC3
ProtClustDB:CLSN2684809 Genevestigator:Q9LIC3 Uniprot:Q9LIC3
Length = 628
Score = 124 (48.7 bits), Expect = 7.4e-07, P = 7.4e-07
Identities = 28/72 (38%), Positives = 44/72 (61%)
Query: 3 VTSCGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNV 62
+TSC + G Q L V+ + ++++VGSSL+ K G+ + ++FE +P R+V
Sbjct: 160 LTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDV 219
Query: 63 VSWTAIIAAFAQ 74
VS TAIIA +AQ
Sbjct: 220 VSCTAIIAGYAQ 231
Score = 121 (47.7 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 23/72 (31%), Positives = 43/72 (59%)
Query: 3 VTSCGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNV 62
+ +C R +R G + +++ ++ Y+ + L+ F GKC D K+ ++MP +NV
Sbjct: 59 LNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNV 118
Query: 63 VSWTAIIAAFAQ 74
VSWTA+I+ ++Q
Sbjct: 119 VSWTAMISRYSQ 130
>TAIR|locus:2025946 [details] [associations]
symbol:CRR28 "CHLORORESPIRATORY REDUCTION28" species:3702
"Arabidopsis thaliana" [GO:0005739 "mitochondrion" evidence=ISM]
[GO:0004519 "endonuclease activity" evidence=IDA] [GO:0009507
"chloroplast" evidence=IDA] [GO:0016556 "mRNA modification"
evidence=RCA;IMP] InterPro:IPR011990 InterPro:IPR002885
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005739 GO:GO:0009507
GO:GO:0016556 EMBL:AC007258 Gene3D:1.25.40.10 PROSITE:PS51375
GO:GO:0004519 EMBL:AC009317 Pfam:PF01535 TIGRFAMs:TIGR00756
Pfam:PF13041 HOGENOM:HOG000237569 EMBL:AK228565 IPI:IPI00526140
PIR:H96620 RefSeq:NP_176180.1 UniGene:At.11368 UniGene:At.66916
ProteinModelPortal:Q0WQW5 SMR:Q0WQW5 STRING:Q0WQW5 PaxDb:Q0WQW5
PRIDE:Q0WQW5 EnsemblPlants:AT1G59720.1 GeneID:842263
KEGG:ath:AT1G59720 GeneFarm:3437 TAIR:At1g59720 eggNOG:NOG287891
InParanoid:Q0WQW5 OMA:LLDACCK PhylomeDB:Q0WQW5
ProtClustDB:CLSN2679697 ArrayExpress:Q0WQW5 Genevestigator:Q0WQW5
Uniprot:Q0WQW5
Length = 638
Score = 124 (48.7 bits), Expect = 7.5e-07, P = 7.5e-07
Identities = 28/76 (36%), Positives = 42/76 (55%)
Query: 5 SCGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVY-KMFEKMPVRNVV 63
+C G Q C V+ GF +VYV + LI G CG +D+ K+F++MP R++V
Sbjct: 160 ACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCG-CLDLARKVFDEMPERSLV 218
Query: 64 SWTAIIAAFAQEWEVD 79
SW ++I A + E D
Sbjct: 219 SWNSMIDALVRFGEYD 234
>TAIR|locus:2202074 [details] [associations]
symbol:CRR22 "CHLORORESPIRATORY REDUCTION22" species:3702
"Arabidopsis thaliana" [GO:0005739 "mitochondrion" evidence=ISM]
[GO:0004519 "endonuclease activity" evidence=IDA] [GO:0009507
"chloroplast" evidence=IDA] [GO:0016556 "mRNA modification"
evidence=RCA;IMP] InterPro:IPR011990 InterPro:IPR002885
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009507 GO:GO:0016556
Gene3D:1.25.40.10 PROSITE:PS51375 GO:GO:0004519 Pfam:PF01535
TIGRFAMs:TIGR00756 EMBL:AC007259 Pfam:PF13041 HOGENOM:HOG000237570
IPI:IPI00534837 RefSeq:NP_172596.1 UniGene:At.65900
ProteinModelPortal:Q3E6Q1 SMR:Q3E6Q1 STRING:Q3E6Q1 PaxDb:Q3E6Q1
PRIDE:Q3E6Q1 EnsemblPlants:AT1G11290.1 GeneID:837671
KEGG:ath:AT1G11290 GeneFarm:3466 TAIR:At1g11290 eggNOG:NOG272527
InParanoid:Q3E6Q1 OMA:HVITWNA PhylomeDB:Q3E6Q1
ProtClustDB:CLSN2681952 Genevestigator:Q3E6Q1 Uniprot:Q3E6Q1
Length = 809
Score = 125 (49.1 bits), Expect = 8.0e-07, P = 8.0e-07
Identities = 23/69 (33%), Positives = 41/69 (59%)
Query: 6 CGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNVVSW 65
CG +R G + L V+SGF +++ + L + KC + + K+F++MP R++VSW
Sbjct: 145 CGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSW 204
Query: 66 TAIIAAFAQ 74
I+A ++Q
Sbjct: 205 NTIVAGYSQ 213
Score = 109 (43.4 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 26/74 (35%), Positives = 41/74 (55%)
Query: 1 MPVTSCGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVR 60
+P S + R I G + A+RSGF + V + ++L+ KCG ++F+ M R
Sbjct: 243 LPAVS--ALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLER 300
Query: 61 NVVSWTAIIAAFAQ 74
NVVSW ++I A+ Q
Sbjct: 301 NVVSWNSMIDAYVQ 314
Score = 105 (42.0 bits), Expect = 0.00011, P = 0.00011
Identities = 27/70 (38%), Positives = 35/70 (50%)
Query: 5 SCGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNVVS 64
+C ++ G L+V G NV V +SLIS KC E MF K+ R +VS
Sbjct: 346 ACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVS 405
Query: 65 WTAIIAAFAQ 74
W A+I FAQ
Sbjct: 406 WNAMILGFAQ 415
>TAIR|locus:2162207 [details] [associations]
symbol:CRR21 "chlororespiratory reduction 21"
species:3702 "Arabidopsis thaliana" [GO:0009507 "chloroplast"
evidence=ISM] [GO:0016556 "mRNA modification" evidence=RCA;IMP]
[GO:0009965 "leaf morphogenesis" evidence=RCA] [GO:0030154 "cell
differentiation" evidence=RCA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=RCA] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0009507 GO:GO:0016556 Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AB009050 Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041
IPI:IPI00527368 RefSeq:NP_200385.1 UniGene:At.65685
ProteinModelPortal:Q9FM64 SMR:Q9FM64 STRING:Q9FM64 PRIDE:Q9FM64
EnsemblPlants:AT5G55740.1 GeneID:835668 KEGG:ath:AT5G55740
GeneFarm:4044 TAIR:At5g55740 eggNOG:NOG265492 HOGENOM:HOG000238049
InParanoid:Q9FM64 OMA:FYCKVGL PhylomeDB:Q9FM64
ProtClustDB:CLSN2687002 Genevestigator:Q9FM64 Uniprot:Q9FM64
Length = 830
Score = 125 (49.1 bits), Expect = 8.3e-07, P = 8.3e-07
Identities = 26/70 (37%), Positives = 39/70 (55%)
Query: 5 SCGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNVVS 64
+CG+ + R G V+SG V+V SSL GKCG D K+F+++P RN V+
Sbjct: 182 ACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVA 241
Query: 65 WTAIIAAFAQ 74
W A++ + Q
Sbjct: 242 WNALMVGYVQ 251
Score = 123 (48.4 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 18/72 (25%), Positives = 43/72 (59%)
Query: 3 VTSCGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNV 62
+++ T N++ G + QC +R F +++ + S+++ KCG +D K+F+ +++
Sbjct: 382 MSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDL 441
Query: 63 VSWTAIIAAFAQ 74
+ W ++AA+A+
Sbjct: 442 ILWNTLLAAYAE 453
Score = 97 (39.2 bits), Expect = 0.00081, P = 0.00081
Identities = 24/67 (35%), Positives = 39/67 (58%)
Query: 6 CGSTRNIRGGTQYQCLAVRSG-FVA-NVYVGSSLISFCGKCGENIDVYK-MFEKMPVRNV 62
C R++ G Q +++G F A N Y+ + L+ F KC + +++ + +F K+ VRNV
Sbjct: 80 CVYERDLSTGKQIHARILKNGDFYARNEYIETKLVIFYAKC-DALEIAEVLFSKLRVRNV 138
Query: 63 VSWTAII 69
SW AII
Sbjct: 139 FSWAAII 145
>TAIR|locus:4010713776 [details] [associations]
symbol:AT3G26782 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM;IDA] InterPro:IPR011990
InterPro:IPR002885 GO:GO:0005739 EMBL:CP002686
GenomeReviews:BA000014_GR Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AB016889 Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF12854
Pfam:PF13041 HOGENOM:HOG000237570 EMBL:AK228506 IPI:IPI00852362
RefSeq:NP_001078212.1 UniGene:At.71198 ProteinModelPortal:Q9LW32
SMR:Q9LW32 EnsemblPlants:AT3G26782.1 GeneID:5008030
KEGG:ath:AT3G26782 GeneFarm:3356 TAIR:At3g26782 eggNOG:NOG324646
OMA:TSIIDMY PhylomeDB:Q9LW32 ProtClustDB:CLSN2696675
Genevestigator:Q9LW32 Uniprot:Q9LW32
Length = 659
Score = 123 (48.4 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 24/70 (34%), Positives = 42/70 (60%)
Query: 3 VTSCGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNV 62
+ +C S +I G Q A G+ ++++V S+LI CG+ D K+F+++P RN+
Sbjct: 83 IKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNI 142
Query: 63 VSWTAIIAAF 72
VSWT++I +
Sbjct: 143 VSWTSMIRGY 152
Score = 100 (40.3 bits), Expect = 0.00029, P = 0.00029
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 23 VRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNVVSWTAIIAAF 72
+R G +V VG+S+I KCG K F++M +NV SWTA+IA +
Sbjct: 314 IRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGY 363
>TAIR|locus:2064828 [details] [associations]
symbol:AT2G40720 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756
Pfam:PF13041 IPI:IPI00544227 PIR:A84833 RefSeq:NP_181604.1
UniGene:At.42919 UniGene:At.42920 ProteinModelPortal:Q7XJN6
SMR:Q7XJN6 EnsemblPlants:AT2G40720.1 GeneID:818667
KEGG:ath:AT2G40720 GeneFarm:3676 TAIR:At2g40720 eggNOG:NOG275300
InParanoid:Q7XJN6 OMA:MYVKCGF PhylomeDB:Q7XJN6
ProtClustDB:CLSN2683637 Genevestigator:Q7XJN6 Uniprot:Q7XJN6
Length = 860
Score = 124 (48.7 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 24/70 (34%), Positives = 39/70 (55%)
Query: 5 SCGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNVVS 64
+C +R G Q +++G V NV+VGSSLI KCG K+F M N+V+
Sbjct: 485 ACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVA 544
Query: 65 WTAIIAAFAQ 74
W ++I+ +++
Sbjct: 545 WNSMISCYSR 554
>TAIR|locus:2049726 [details] [associations]
symbol:AT2G37310 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002685 GenomeReviews:CT485783_GR
EMBL:AC005896 Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535
Pfam:PF13812 TIGRFAMs:TIGR00756 Pfam:PF13041 EMBL:AK230376
IPI:IPI00523165 PIR:B84791 RefSeq:NP_181268.1 UniGene:At.51341
ProteinModelPortal:Q9ZUT5 SMR:Q9ZUT5 PRIDE:Q9ZUT5
EnsemblPlants:AT2G37310.1 GeneID:818308 KEGG:ath:AT2G37310
GeneFarm:3673 TAIR:At2g37310 eggNOG:NOG272931 HOGENOM:HOG000090695
InParanoid:Q9ZUT5 OMA:AYGHLIQ PhylomeDB:Q9ZUT5
ProtClustDB:CLSN2683974 Genevestigator:Q9ZUT5 Uniprot:Q9ZUT5
Length = 657
Score = 122 (48.0 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 25/75 (33%), Positives = 43/75 (57%)
Query: 11 NIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNVVSWTAIIA 70
N++GG + A+R+G N+YV +S+I K G + ++F+ R++++WTAII
Sbjct: 381 NLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIIT 440
Query: 71 AFAQEWEVDM-CYTF 84
A+A + D C F
Sbjct: 441 AYAVHGDSDSACSLF 455
Score = 119 (46.9 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 23/66 (34%), Positives = 43/66 (65%)
Query: 17 QYQCLAVRSGFVANVYVGSSLISFCGKCGENID-VYKMFEKMPVRNVVSWTAIIAAFAQE 75
Q +R GF ++V+VG+ +I++ KC +NI+ K+F++M R+VVSW ++I+ ++Q
Sbjct: 153 QVHGFVIRGGFDSDVFVGNGMITYYTKC-DNIESARKVFDEMSERDVVSWNSMISGYSQS 211
Query: 76 WEVDMC 81
+ C
Sbjct: 212 GSFEDC 217
>TAIR|locus:2150690 [details] [associations]
symbol:EMB175 "AT5G03800" species:3702 "Arabidopsis
thaliana" [GO:0003824 "catalytic activity" evidence=ISS]
[GO:0009507 "chloroplast" evidence=ISM] [GO:0009793 "embryo
development ending in seed dormancy" evidence=IMP;NAS] [GO:0016020
"membrane" evidence=ISS] InterPro:IPR002885 EMBL:CP002688
GenomeReviews:BA000015_GR EMBL:AL162873 EMBL:AB005235 GO:GO:0009793
PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041
EMBL:AY864345 EMBL:AY864346 EMBL:AK117204 IPI:IPI00535493
PIR:T48407 RefSeq:NP_196000.2 UniGene:At.63783
ProteinModelPortal:Q9FFN1 SMR:Q9FFN1 EnsemblPlants:AT5G03800.1
GeneID:831717 KEGG:ath:AT5G03800 GeneFarm:3198 TAIR:At5g03800
eggNOG:NOG285897 HOGENOM:HOG000242153 InParanoid:Q9FFN1 OMA:TEMITAY
PhylomeDB:Q9FFN1 ProtClustDB:CLSN2681629 Genevestigator:Q9FFN1
Uniprot:Q9FFN1
Length = 896
Score = 123 (48.4 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 22/67 (32%), Positives = 41/67 (61%)
Query: 6 CGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNVVSW 65
CG+ G Q C A+++G+ +++ +G+SLIS KC ++ D K+F M +V+SW
Sbjct: 531 CGTLGFREMGYQIHCYALKAGYFSDISLGNSLISMYAKCCDSDDAIKIFNTMREHDVISW 590
Query: 66 TAIIAAF 72
++I+ +
Sbjct: 591 NSLISCY 597
Score = 121 (47.7 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 26/75 (34%), Positives = 45/75 (60%)
Query: 3 VTSCGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGK-CGENID-VYKMFEKMPVR 60
+T+C G Q L V+SGF+ +V+V +SL+S K G + D V K+F+++P R
Sbjct: 188 LTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVLKLFDEIPQR 247
Query: 61 NVVSWTAIIAAFAQE 75
+V SW ++++ +E
Sbjct: 248 DVASWNTVVSSLVKE 262
>TAIR|locus:2117084 [details] [associations]
symbol:AT4G18840 "AT4G18840" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002687
GenomeReviews:CT486007_GR EMBL:AL021711 EMBL:AL161549
Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756
Pfam:PF13041 HOGENOM:HOG000237569 IPI:IPI00520324 PIR:E85212
PIR:T05021 RefSeq:NP_193619.1 UniGene:At.65398
ProteinModelPortal:O49399 SMR:O49399 PRIDE:O49399
EnsemblPlants:AT4G18840.1 GeneID:827618 KEGG:ath:AT4G18840
GeneFarm:4035 TAIR:At4g18840 eggNOG:NOG265885 InParanoid:O49399
OMA:SQGEWVH PhylomeDB:O49399 ProtClustDB:CLSN2685461
Genevestigator:O49399 Uniprot:O49399
Length = 545
Score = 119 (46.9 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 23/75 (30%), Positives = 45/75 (60%)
Query: 5 SCGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNVVS 64
+C + G Q L ++SG V +V+V ++L++ G+ G K+ ++MPVR+ VS
Sbjct: 149 ACAAFCGFEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVS 208
Query: 65 WTAIIAAFAQEWEVD 79
W ++++A+ ++ VD
Sbjct: 209 WNSLLSAYLEKGLVD 223
>TAIR|locus:2130389 [details] [associations]
symbol:LOI1 "lovastatin insensitive 1" species:3702
"Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0016125 "sterol metabolic process"
evidence=IMP] [GO:0019287 "isopentenyl diphosphate biosynthetic
process, mevalonate pathway" evidence=IMP] [GO:0019288 "isopentenyl
diphosphate biosynthetic process, mevalonate-independent pathway"
evidence=IMP] [GO:0034046 "poly(G) RNA binding" evidence=IDA]
[GO:0048364 "root development" evidence=IMP] [GO:0050790
"regulation of catalytic activity" evidence=IMP] InterPro:IPR011990
InterPro:IPR002885 GO:GO:0005739 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0000166 GO:GO:0050790 GO:GO:0048364
Gene3D:1.25.40.10 PROSITE:PS51375 GO:GO:0016125 GO:GO:0034046
EMBL:AL161540 EMBL:Z97337 Pfam:PF01535 TIGRFAMs:TIGR00756
GO:GO:0019288 GO:GO:0019287 Pfam:PF13041 HOGENOM:HOG000237570
EMBL:AK227954 EMBL:BT010464 IPI:IPI00542565 PIR:F71411
RefSeq:NP_193221.3 UniGene:At.33233 ProteinModelPortal:Q0WSH6
SMR:Q0WSH6 STRING:Q0WSH6 PRIDE:Q0WSH6 EnsemblPlants:AT4G14850.1
GeneID:827142 KEGG:ath:AT4G14850 GeneFarm:3145 TAIR:At4g14850
eggNOG:NOG292234 InParanoid:Q0WSH6 OMA:CSAFDMY PhylomeDB:Q0WSH6
ProtClustDB:CLSN2681604 Genevestigator:Q0WSH6 Uniprot:Q0WSH6
Length = 684
Score = 120 (47.3 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 26/75 (34%), Positives = 41/75 (54%)
Query: 3 VTSCGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNV 62
+ +C ++ G Q L +RSGF +V V + LI F GKC + +F +M +N
Sbjct: 216 LNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNA 275
Query: 63 VSWTAIIAAFAQEWE 77
VSW +++AA+ Q E
Sbjct: 276 VSWCSLVAAYVQNHE 290
Score = 118 (46.6 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 23/78 (29%), Positives = 44/78 (56%)
Query: 3 VTSCGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNV 62
+++C + G AV++ ++VGS+L+ GKCG D + F++MP +N+
Sbjct: 317 LSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNL 376
Query: 63 VSWTAIIAAFAQEWEVDM 80
V+ ++I +A + +VDM
Sbjct: 377 VTRNSLIGGYAHQGQVDM 394
>TAIR|locus:2020763 [details] [associations]
symbol:AT1G03510 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002684 GenomeReviews:CT485782_GR
EMBL:AC002560 Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535
TIGRFAMs:TIGR00756 Pfam:PF13041 HOGENOM:HOG000237569
IPI:IPI00544465 PIR:T00907 RefSeq:NP_171850.1 UniGene:At.65881
ProteinModelPortal:Q9LR72 SMR:Q9LR72 EnsemblPlants:AT1G03510.1
GeneID:839478 KEGG:ath:AT1G03510 GeneFarm:3640 TAIR:At1g03510
eggNOG:NOG247446 InParanoid:Q9LR72 OMA:EAYGRCG PhylomeDB:Q9LR72
ProtClustDB:CLSN2679669 Genevestigator:Q9LR72 Uniprot:Q9LR72
Length = 429
Score = 116 (45.9 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 24/73 (32%), Positives = 44/73 (60%)
Query: 1 MPVTSCGST-RNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPV 59
+ + SC + R + GG+ + +V+S F++N +VG +L+ GKC K+F+++P
Sbjct: 53 LALKSCAAAFRPVLGGSVH-AHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQ 111
Query: 60 RNVVSWTAIIAAF 72
RN V W A+I+ +
Sbjct: 112 RNAVVWNAMISHY 124
>TAIR|locus:2083631 [details] [associations]
symbol:AT3G15130 "AT3G15130" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002686
GenomeReviews:BA000014_GR Gene3D:1.25.40.10 PROSITE:PS51375
Pfam:PF01535 Pfam:PF13812 TIGRFAMs:TIGR00756 EMBL:AP001299
Pfam:PF13041 HOGENOM:HOG000237570 IPI:IPI00524662
RefSeq:NP_188131.1 UniGene:At.65091 ProteinModelPortal:P0C898
SMR:P0C898 EnsemblPlants:AT3G15130.1 GeneID:820744
KEGG:ath:AT3G15130 GeneFarm:3534 TAIR:At3g15130 eggNOG:NOG277199
OMA:KEVHFFY PhylomeDB:P0C898 ProtClustDB:CLSN2685096
Genevestigator:P0C898 Uniprot:P0C898
Length = 689
Score = 118 (46.6 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 23/56 (41%), Positives = 34/56 (60%)
Query: 15 GTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNVVSWTAIIA 70
G Q C ++SG N+ + LI KC E + YK+F+ MP RNVVSW+A+++
Sbjct: 25 GGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMS 80
Score = 115 (45.5 bits), Expect = 7.7e-06, P = 7.7e-06
Identities = 23/68 (33%), Positives = 37/68 (54%)
Query: 5 SCGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNVVS 64
+CG + G Q ++ GF V VG+SL+ KCG + K+F ++ R+++S
Sbjct: 116 ACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLIS 175
Query: 65 WTAIIAAF 72
W A+IA F
Sbjct: 176 WNAMIAGF 183
Score = 113 (44.8 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 25/75 (33%), Positives = 40/75 (53%)
Query: 5 SCGSTRNIRGGTQYQCLAVRSGF--VANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNV 62
+C ST I G Q VRSGF ++ + SL+ KCG K F+++ + +
Sbjct: 219 ACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTM 278
Query: 63 VSWTAIIAAFAQEWE 77
+SW+++I +AQE E
Sbjct: 279 ISWSSLILGYAQEGE 293
>TAIR|locus:2055919 [details] [associations]
symbol:AT2G22070 "AT2G22070" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR019734 Pfam:PF13176
InterPro:IPR002885 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756
EMBL:AC007232 Pfam:PF13041 HOGENOM:HOG000237570 IPI:IPI00546911
PIR:F84608 RefSeq:NP_179798.1 UniGene:At.39486
ProteinModelPortal:Q9SHZ8 SMR:Q9SHZ8 EnsemblPlants:AT2G22070.1
GeneID:816742 KEGG:ath:AT2G22070 GeneFarm:3362 TAIR:At2g22070
eggNOG:NOG294209 InParanoid:Q9SHZ8 OMA:SHYACMV PhylomeDB:Q9SHZ8
ProtClustDB:CLSN2683727 Genevestigator:Q9SHZ8 Uniprot:Q9SHZ8
Length = 786
Score = 118 (46.6 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 25/78 (32%), Positives = 44/78 (56%)
Query: 3 VTSCGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNV 62
+ S +TR + G + V+ G NV V +SL++ KCG+ + +F++M VR++
Sbjct: 153 LASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDI 212
Query: 63 VSWTAIIAAFAQEWEVDM 80
SW A+IA Q ++D+
Sbjct: 213 SSWNAMIALHMQVGQMDL 230
Score = 112 (44.5 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 18/65 (27%), Positives = 40/65 (61%)
Query: 20 CLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNVVSWTAIIAAFAQEWEVD 79
C ++SG + +VY+ ++L++ K G + K+F++MP+R SW +++A+++ ++D
Sbjct: 38 CRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMD 97
Query: 80 MCYTF 84
F
Sbjct: 98 STCEF 102
>TAIR|locus:2089333 [details] [associations]
symbol:AT3G16610 "AT3G16610" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0006302 "double-strand break repair" evidence=RCA]
[GO:0006312 "mitotic recombination" evidence=RCA] [GO:0007062
"sister chromatid cohesion" evidence=RCA] [GO:0007129 "synapsis"
evidence=RCA] [GO:0007131 "reciprocal meiotic recombination"
evidence=RCA] [GO:0042138 "meiotic DNA double-strand break
formation" evidence=RCA] [GO:0045132 "meiotic chromosome
segregation" evidence=RCA] InterPro:IPR002885 EMBL:CP002686
GenomeReviews:BA000014_GR PROSITE:PS51375 EMBL:AB022217
Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041 HOGENOM:HOG000237570
IPI:IPI00549054 RefSeq:NP_188283.1 UniGene:At.38870
UniGene:At.66463 ProteinModelPortal:Q9LUS3 SMR:Q9LUS3 PaxDb:Q9LUS3
PRIDE:Q9LUS3 EnsemblPlants:AT3G16610.1 GeneID:820912
KEGG:ath:AT3G16610 GeneFarm:4237 TAIR:At3g16610 eggNOG:NOG326174
InParanoid:Q9LUS3 OMA:KNEVTWS PhylomeDB:Q9LUS3
ProtClustDB:CLSN2913360 Genevestigator:Q9LUS3 Uniprot:Q9LUS3
Length = 654
Score = 117 (46.2 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 24/69 (34%), Positives = 39/69 (56%)
Query: 5 SCGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNVVS 64
+C R I G S F ++YV ++L+ F KCGE K+F++MP R++V+
Sbjct: 112 ACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVA 171
Query: 65 WTAIIAAFA 73
W A+I+ F+
Sbjct: 172 WNAMISGFS 180
Score = 110 (43.8 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 19/64 (29%), Positives = 40/64 (62%)
Query: 6 CGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNVVSW 65
C ++ GG C AV++GF+ ++ V +++ISF K G D ++ F ++ +++V+S+
Sbjct: 318 CARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISY 377
Query: 66 TAII 69
++I
Sbjct: 378 NSLI 381
>TAIR|locus:2086964 [details] [associations]
symbol:MEF25 "mitochondrial RNA editing factor 25"
species:3702 "Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR011990 InterPro:IPR002885 GO:GO:0005739 EMBL:CP002686
GenomeReviews:BA000014_GR Gene3D:1.25.40.10 PROSITE:PS51375
Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041 HOGENOM:HOG000237570
EMBL:AP000412 IPI:IPI00521244 RefSeq:NP_189142.1 UniGene:At.53485
ProteinModelPortal:Q9LJR6 SMR:Q9LJR6 PRIDE:Q9LJR6
EnsemblPlants:AT3G25060.1 GeneID:822097 KEGG:ath:AT3G25060
GeneFarm:3870 TAIR:At3g25060 eggNOG:NOG267249 InParanoid:Q9LJR6
OMA:DHATFAS PhylomeDB:Q9LJR6 ProtClustDB:CLSN2915355
Genevestigator:Q9LJR6 Uniprot:Q9LJR6
Length = 601
Score = 116 (45.9 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 25/74 (33%), Positives = 41/74 (55%)
Query: 1 MPVTSCGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVR 60
M + +C S + G C AV G+ +V+V SS+++ KCG+ + +F KM R
Sbjct: 121 MTIKACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKR 180
Query: 61 NVVSWTAIIAAFAQ 74
+V+ WT ++ FAQ
Sbjct: 181 DVICWTTMVTGFAQ 194
>TAIR|locus:2019160 [details] [associations]
symbol:AT1G74630 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:1.25.40.10 PROSITE:PS51375 EMBL:AC011765 Pfam:PF01535
Pfam:PF13812 TIGRFAMs:TIGR00756 Pfam:PF13041 EMBL:AK220733
EMBL:AK220737 IPI:IPI00540769 PIR:D96775 RefSeq:NP_177601.1
UniGene:At.34855 UniGene:At.70345 ProteinModelPortal:Q9CA54
SMR:Q9CA54 PRIDE:Q9CA54 EnsemblPlants:AT1G74630.1 GeneID:843802
KEGG:ath:AT1G74630 GeneFarm:3465 TAIR:At1g74630 eggNOG:NOG304289
HOGENOM:HOG000237569 InParanoid:Q9CA54 OMA:KVFDEMH PhylomeDB:Q9CA54
ProtClustDB:CLSN2682262 Genevestigator:Q9CA54 Uniprot:Q9CA54
Length = 643
Score = 116 (45.9 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 23/62 (37%), Positives = 39/62 (62%)
Query: 10 RNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNVVSWTAII 69
R++R G Q C A++ G ++++VG++LI G CG K+F++M N+V+W A+I
Sbjct: 120 RSLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVI 179
Query: 70 AA 71
A
Sbjct: 180 TA 181
>TAIR|locus:2132452 [details] [associations]
symbol:AT4G08210 "AT4G08210" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002687
GenomeReviews:CT486007_GR Gene3D:1.25.40.10 PROSITE:PS51375
Pfam:PF01535 TIGRFAMs:TIGR00756 EMBL:AL080252 EMBL:AL161510
Pfam:PF12854 Pfam:PF13041 HOGENOM:HOG000237569 IPI:IPI00547188
PIR:T10548 RefSeq:NP_192561.1 UniGene:At.65338
ProteinModelPortal:Q9SUF9 SMR:Q9SUF9 PRIDE:Q9SUF9
EnsemblPlants:AT4G08210.1 GeneID:826371 KEGG:ath:AT4G08210
GeneFarm:4031 TAIR:At4g08210 eggNOG:NOG237305 InParanoid:Q9SUF9
OMA:LGACGTH PhylomeDB:Q9SUF9 ProtClustDB:CLSN2685961
Genevestigator:Q9SUF9 Uniprot:Q9SUF9
Length = 686
Score = 116 (45.9 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 24/79 (30%), Positives = 40/79 (50%)
Query: 6 CGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNVVSW 65
C S ++ G Q L ++ G+ + ++L+ KCGE + +F+ M R+VVSW
Sbjct: 453 CSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGMLERDVVSW 512
Query: 66 TAIIAAFAQEWEVDMCYTF 84
T II F Q V+ + +
Sbjct: 513 TGIIVGFGQNGRVEEAFRY 531
Score = 107 (42.7 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 18/70 (25%), Positives = 38/70 (54%)
Query: 6 CGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNVVSW 65
CG + + G Q ++ G NV++ +++IS D +K+F++M RN+V+W
Sbjct: 15 CGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTW 74
Query: 66 TAIIAAFAQE 75
T +++ + +
Sbjct: 75 TTMVSGYTSD 84
>TAIR|locus:2825319 [details] [associations]
symbol:AT1G71460 "AT1G71460" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009507 Gene3D:1.25.40.10
PROSITE:PS51375 EMBL:AC016163 Pfam:PF01535 TIGRFAMs:TIGR00756
UniGene:At.43565 Pfam:PF13041 IPI:IPI00530903 RefSeq:NP_177302.1
ProteinModelPortal:Q9C9I3 SMR:Q9C9I3 PaxDb:Q9C9I3 PRIDE:Q9C9I3
EnsemblPlants:AT1G71460.1 GeneID:843487 KEGG:ath:AT1G71460
GeneFarm:4285 TAIR:At1g71460 eggNOG:NOG247100 HOGENOM:HOG000071048
InParanoid:Q9C9I3 OMA:YFKCGKV PhylomeDB:Q9C9I3
ProtClustDB:CLSN2679252 Genevestigator:Q9C9I3 Uniprot:Q9C9I3
Length = 689
Score = 116 (45.9 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 24/78 (30%), Positives = 45/78 (57%)
Query: 1 MPVTSCGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVR 60
+PV C R I+ G + C A+++ F+ NV + +SL+ KCG ++F+++ R
Sbjct: 425 LPV--CAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQR 482
Query: 61 NVVSWTAIIAAFAQEWEV 78
NV +WTA+I + + ++
Sbjct: 483 NVKAWTAMIDCYVENCDL 500
Score = 100 (40.3 bits), Expect = 0.00031, P = 0.00031
Identities = 21/69 (30%), Positives = 42/69 (60%)
Query: 12 IRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNVVSWTAIIAA 71
+R G + LA+++G +V++ +SL+ KCG+ ++F+++ R++V W A+IA
Sbjct: 230 LRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAG 289
Query: 72 FA---QEWE 77
A ++WE
Sbjct: 290 LAHNKRQWE 298
>TAIR|locus:2080727 [details] [associations]
symbol:MEF10 "mitochondrial RNA editing factor 10"
species:3702 "Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM] [GO:0016554 "cytidine to uridine editing"
evidence=IMP] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002686
GenomeReviews:BA000014_GR Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AC008153 Pfam:PF01535 Pfam:PF13812 TIGRFAMs:TIGR00756
Pfam:PF13041 HOGENOM:HOG000237570 IPI:IPI00530970
RefSeq:NP_187753.1 UniGene:At.53270 ProteinModelPortal:Q9CAY1
SMR:Q9CAY1 PaxDb:Q9CAY1 PRIDE:Q9CAY1 EnsemblPlants:AT3G11460.1
GeneID:820319 KEGG:ath:AT3G11460 GeneFarm:3438 TAIR:At3g11460
eggNOG:NOG330951 InParanoid:Q9CAY1 OMA:GLITWNA PhylomeDB:Q9CAY1
ProtClustDB:CLSN2684416 Genevestigator:Q9CAY1 Uniprot:Q9CAY1
Length = 623
Score = 115 (45.5 bits), Expect = 6.7e-06, P = 6.7e-06
Identities = 24/70 (34%), Positives = 40/70 (57%)
Query: 3 VTSCGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNV 62
++SC + G + L +GFV NV+V ++ IS +CG +F+ MPV+++
Sbjct: 264 LSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSL 323
Query: 63 VSWTAIIAAF 72
VSWTA+I +
Sbjct: 324 VSWTAMIGCY 333
Score = 95 (38.5 bits), Expect = 0.00094, P = 0.00094
Identities = 19/56 (33%), Positives = 35/56 (62%)
Query: 19 QCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNVVSWTAIIAAFAQ 74
QC V+ G + V V +S I+ KCG ++F++MPV+ +++W A+I+ ++Q
Sbjct: 181 QC--VKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQ 234
>TAIR|locus:2115130 [details] [associations]
symbol:AT4G37170 "AT4G37170" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002687
GenomeReviews:CT486007_GR Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:Z99707 EMBL:AL161590 Pfam:PF01535 Pfam:PF13812
TIGRFAMs:TIGR00756 HOGENOM:HOG000237570 IPI:IPI00546419 PIR:B85439
RefSeq:NP_195434.1 UniGene:At.65464 ProteinModelPortal:O23169
SMR:O23169 PRIDE:O23169 EnsemblPlants:AT4G37170.1 GeneID:829871
KEGG:ath:AT4G37170 GeneFarm:3146 TAIR:At4g37170 eggNOG:NOG313360
InParanoid:O23169 OMA:QNGQPDE PhylomeDB:O23169
ProtClustDB:CLSN2685770 Genevestigator:O23169 Uniprot:O23169
Length = 691
Score = 115 (45.5 bits), Expect = 7.7e-06, P = 7.7e-06
Identities = 21/69 (30%), Positives = 37/69 (53%)
Query: 6 CGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNVVSW 65
C TR + G + SGFV + + + L+ KCG +D K+F++MP R++ SW
Sbjct: 95 CSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSW 154
Query: 66 TAIIAAFAQ 74
++ +A+
Sbjct: 155 NVMVNGYAE 163
Score = 98 (39.6 bits), Expect = 0.00051, P = 0.00051
Identities = 23/76 (30%), Positives = 42/76 (55%)
Query: 3 VTSCGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNV 62
V + + + IR G + VR+G ++ + SSL+ GKCG + +F+K+ ++V
Sbjct: 225 VAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDV 284
Query: 63 VSWTAIIAAF--AQEW 76
VSWT++I + + W
Sbjct: 285 VSWTSMIDRYFKSSRW 300
>TAIR|locus:2012295 [details] [associations]
symbol:AT1G09410 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:1.25.40.10 EMBL:AC003970 PROSITE:PS51375 Pfam:PF01535
TIGRFAMs:TIGR00756 UniGene:At.70699 Pfam:PF12854
HOGENOM:HOG000237570 EMBL:DQ446238 EMBL:AK221693 IPI:IPI00525858
IPI:IPI00570432 PIR:D86227 RefSeq:NP_172412.1 UniGene:At.63945
ProteinModelPortal:Q56XI1 SMR:Q56XI1 PRIDE:Q56XI1
EnsemblPlants:AT1G09410.1 GeneID:837463 KEGG:ath:AT1G09410
GeneFarm:3184 TAIR:At1g09410 eggNOG:NOG252899 InParanoid:O80524
OMA:NEAMEMI PhylomeDB:Q56XI1 Genevestigator:Q56XI1 Uniprot:Q56XI1
Length = 705
Score = 115 (45.5 bits), Expect = 7.9e-06, P = 7.9e-06
Identities = 22/68 (32%), Positives = 38/68 (55%)
Query: 6 CGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNVVSW 65
C S ++ G Q VR F +VYV S L++ KCGE + +F++ P ++++ W
Sbjct: 341 CASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMW 400
Query: 66 TAIIAAFA 73
+II+ +A
Sbjct: 401 NSIISGYA 408
Score = 97 (39.2 bits), Expect = 0.00067, P = 0.00067
Identities = 20/51 (39%), Positives = 31/51 (60%)
Query: 30 NVYVGSSLISFCGKCGENIDVYKMFEKMPVRNVVSWTAIIAAFAQEWEVDM 80
N+ + L+S K GE + K+F+ MP RNVVSWTA++ + +VD+
Sbjct: 78 NIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDV 128
>TAIR|locus:2119440 [details] [associations]
symbol:AT4G13650 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:1.25.40.10 PROSITE:PS51375 EMBL:AL035528 EMBL:AL161537
Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041 HOGENOM:HOG000237570
EMBL:BX827423 IPI:IPI00545859 PIR:T05234 RefSeq:NP_193101.2
UniGene:At.50335 ProteinModelPortal:Q9SVP7 SMR:Q9SVP7 PaxDb:Q9SVP7
PRIDE:Q9SVP7 EnsemblPlants:AT4G13650.1 GeneID:826999
KEGG:ath:AT4G13650 GeneFarm:3429 TAIR:At4g13650 eggNOG:NOG244096
InParanoid:Q9SVP7 OMA:YVCNALV PhylomeDB:Q9SVP7
ProtClustDB:CLSN2680966 Genevestigator:Q9SVP7 Uniprot:Q9SVP7
Length = 1064
Score = 117 (46.2 bits), Expect = 8.0e-06, P = 8.0e-06
Identities = 24/72 (33%), Positives = 40/72 (55%)
Query: 3 VTSCGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNV 62
V + T N++ G Q + ++G+ + V ++LIS KCG D K F ++ +N
Sbjct: 699 VKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNE 758
Query: 63 VSWTAIIAAFAQ 74
VSW AII A+++
Sbjct: 759 VSWNAIINAYSK 770
Score = 98 (39.6 bits), Expect = 0.00085, P = 0.00085
Identities = 18/72 (25%), Positives = 40/72 (55%)
Query: 3 VTSCGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNV 62
V++C + ++ G Q A SGF +++ ++L++ +CG+ + Y FE+ +
Sbjct: 598 VSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDN 657
Query: 63 VSWTAIIAAFAQ 74
++W A+++ F Q
Sbjct: 658 IAWNALVSGFQQ 669
>TAIR|locus:2038603 [details] [associations]
symbol:AT2G27610 "AT2G27610" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002685
GenomeReviews:CT485783_GR Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AC006232 EMBL:AC005824 Pfam:PF01535 TIGRFAMs:TIGR00756
Pfam:PF13041 HOGENOM:HOG000237570 IPI:IPI00547006 PIR:G84674
RefSeq:NP_180329.1 UniGene:At.13265 UniGene:At.66363
ProteinModelPortal:Q9ZUW3 SMR:Q9ZUW3 PRIDE:Q9ZUW3
EnsemblPlants:AT2G27610.1 GeneID:817307 KEGG:ath:AT2G27610
GeneFarm:3453 TAIR:At2g27610 eggNOG:NOG320969 InParanoid:Q9ZUW3
OMA:IVAWSAM PhylomeDB:Q9ZUW3 ProtClustDB:CLSN2683516
Genevestigator:Q9ZUW3 Uniprot:Q9ZUW3
Length = 868
Score = 116 (45.9 bits), Expect = 8.0e-06, P = 8.0e-06
Identities = 25/61 (40%), Positives = 39/61 (63%)
Query: 15 GTQYQCLAVRSGFVANVYVGSSLISFCGKCGENI-DVYKMFEKMPVRNVVSWTAIIAAFA 73
G Q C ++ GF+ +V VG+SL+ K G N D K+F++M RNVV+WT +I+ +A
Sbjct: 112 GRQLHCQCIKFGFLDDVSVGTSLVDTYMK-GSNFKDGRKVFDEMKERNVVTWTTLISGYA 170
Query: 74 Q 74
+
Sbjct: 171 R 171
Score = 111 (44.1 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 23/70 (32%), Positives = 41/70 (58%)
Query: 6 CGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMP-VRNVVS 64
C + + +R Q C V+ GF+ + + ++L+ KC +D ++F+++ V NVVS
Sbjct: 305 CANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVS 364
Query: 65 WTAIIAAFAQ 74
WTA+I+ F Q
Sbjct: 365 WTAMISGFLQ 374
>TAIR|locus:2825364 [details] [associations]
symbol:AT1G71420 "AT1G71420" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002684
GenomeReviews:CT485782_GR Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AC016163 Pfam:PF01535 Pfam:PF13812 TIGRFAMs:TIGR00756
Pfam:PF13041 HOGENOM:HOG000237570 EMBL:AK230400 IPI:IPI00539447
RefSeq:NP_177298.1 UniGene:At.51303 ProteinModelPortal:Q9C9H9
SMR:Q9C9H9 EnsemblPlants:AT1G71420.1 GeneID:843483
KEGG:ath:AT1G71420 GeneFarm:3464 TAIR:At1g71420 eggNOG:NOG242517
InParanoid:Q9C9H9 OMA:GSCRKHG PhylomeDB:Q9C9H9
ProtClustDB:CLSN2679244 Genevestigator:Q9C9H9 Uniprot:Q9C9H9
Length = 745
Score = 115 (45.5 bits), Expect = 8.5e-06, P = 8.5e-06
Identities = 25/72 (34%), Positives = 39/72 (54%)
Query: 5 SCGSTRNIRGGTQ--YQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNV 62
+C RN+ G + L+ + NV + + LI+ KCG + ++F+ MP RNV
Sbjct: 68 ACAEQRNLLDGINLHHHMLSHPYCYSQNVILANFLINMYAKCGNILYARQVFDTMPERNV 127
Query: 63 VSWTAIIAAFAQ 74
VSWTA+I + Q
Sbjct: 128 VSWTALITGYVQ 139
Score = 107 (42.7 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 24/73 (32%), Positives = 42/73 (57%)
Query: 3 VTSCGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYK---MFEKMPV 59
+TSC G Q LA++ G ++YV +++IS G+C + Y+ +FE +
Sbjct: 168 LTSC----RYEPGKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKF 223
Query: 60 RNVVSWTAIIAAF 72
+N+V+W ++IAAF
Sbjct: 224 KNLVTWNSMIAAF 236
Score = 106 (42.4 bits), Expect = 7.8e-05, P = 7.8e-05
Identities = 22/76 (28%), Positives = 42/76 (55%)
Query: 5 SCGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDV-YKMFEKMPVRNVV 63
+C R ++ GF+A+ + +SLI KCG ++D+ ++F+ M R+VV
Sbjct: 378 ACAGLVTARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCG-SLDLCMRVFDDMDSRDVV 436
Query: 64 SWTAIIAAFAQEWEVD 79
SW +++ A++ +VD
Sbjct: 437 SWNSMLKAYSLHGQVD 452
>TAIR|locus:2063771 [details] [associations]
symbol:AT2G03380 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 GO:GO:0005739 EMBL:CP002685
GenomeReviews:CT485783_GR Gene3D:1.25.40.10 PROSITE:PS51375
Pfam:PF01535 Pfam:PF13812 TIGRFAMs:TIGR00756 EMBL:AC006284
HOGENOM:HOG000237570 IPI:IPI00538767 PIR:G84447 RefSeq:NP_178437.1
UniGene:At.52621 ProteinModelPortal:Q9ZQ74 SMR:Q9ZQ74 PaxDb:Q9ZQ74
PRIDE:Q9ZQ74 EnsemblPlants:AT2G03380.1 GeneID:814867
KEGG:ath:AT2G03380 GeneFarm:3664 TAIR:At2g03380 eggNOG:NOG251025
InParanoid:Q9ZQ74 OMA:GAFLHGC PhylomeDB:Q9ZQ74
ProtClustDB:CLSN2683830 Genevestigator:Q9ZQ74 Uniprot:Q9ZQ74
Length = 689
Score = 114 (45.2 bits), Expect = 9.8e-06, P = 9.8e-06
Identities = 20/74 (27%), Positives = 45/74 (60%)
Query: 4 TSCGSTRNIRGGTQYQCLAVRSGFVAN--VYVGSSLISFCGKCGENIDVYKMFEKMPVRN 61
++C S ++ G+ +V+ GF+A+ V+VG++L+ F KCG+ +F+ + +N
Sbjct: 451 SACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKN 510
Query: 62 VVSWTAIIAAFAQE 75
++W+A+I + ++
Sbjct: 511 TITWSAMIGGYGKQ 524
Score = 108 (43.1 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 23/77 (29%), Positives = 41/77 (53%)
Query: 5 SCGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNVVS 64
+C +++ G + C V+ NV + + L+ KCGE +K+F + +RNVV
Sbjct: 151 ACTELQDLDNGKKIHCQLVKVPSFDNVVL-TGLLDMYAKCGEIKSAHKVFNDITLRNVVC 209
Query: 65 WTAIIAAFAQEWEVDMC 81
WT++IA + + D+C
Sbjct: 210 WTSMIAGYVKN---DLC 223
Score = 102 (41.0 bits), Expect = 0.00019, P = 0.00019
Identities = 20/76 (26%), Positives = 41/76 (53%)
Query: 3 VTSCGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNV 62
++ CG N+ G L+++ G + + V ++L+ KC +N D +FE +++
Sbjct: 350 LSGCGLIENLELGRSVHGLSIKVG-IWDTNVANALVHMYAKCYQNRDAKYVFEMESEKDI 408
Query: 63 VSWTAIIAAFAQEWEV 78
V+W +II+ F+Q +
Sbjct: 409 VAWNSIISGFSQNGSI 424
>TAIR|locus:2096414 [details] [associations]
symbol:AT3G03580 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:1.25.40.10 PROSITE:PS51375 EMBL:AC009327 Pfam:PF01535
Pfam:PF13812 TIGRFAMs:TIGR00756 Pfam:PF13041 HOGENOM:HOG000237570
EMBL:BT004278 EMBL:BT006153 IPI:IPI00535817 RefSeq:NP_187008.1
UniGene:At.40958 ProteinModelPortal:Q9SS60 SMR:Q9SS60 PaxDb:Q9SS60
PRIDE:Q9SS60 EnsemblPlants:AT3G03580.1 GeneID:821229
KEGG:ath:AT3G03580 GeneFarm:3232 TAIR:At3g03580 eggNOG:NOG261100
InParanoid:Q9SS60 OMA:YTFPSVI PhylomeDB:Q9SS60
ProtClustDB:CLSN2684094 Genevestigator:Q9SS60 Uniprot:Q9SS60
Length = 882
Score = 115 (45.5 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 24/72 (33%), Positives = 40/72 (55%)
Query: 6 CGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNVVSW 65
C S R G + C +R G+ + + +G++LI KCG + ++FE+M R+VV+W
Sbjct: 519 CASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTW 578
Query: 66 TAIIAAFAQEWE 77
T +I A+ E
Sbjct: 579 TGMIYAYGMYGE 590
Score = 99 (39.9 bits), Expect = 0.00053, P = 0.00053
Identities = 21/74 (28%), Positives = 37/74 (50%)
Query: 5 SCGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNVVS 64
+CG R++ +++GFV V + LI KCG+ I +F M ++ VS
Sbjct: 316 ACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVS 375
Query: 65 WTAIIAAFAQEWEV 78
W +II+ + Q ++
Sbjct: 376 WNSIISGYIQSGDL 389
>TAIR|locus:2134842 [details] [associations]
symbol:AT4G04370 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:1.25.40.10 PROSITE:PS51375 EMBL:AL161500 Pfam:PF01535
Pfam:PF13812 TIGRFAMs:TIGR00756 Pfam:PF13041 EMBL:AF069441
IPI:IPI00531168 PIR:C85055 RefSeq:NP_192346.1 UniGene:At.66630
UniGene:At.70894 UniGene:At.74904 ProteinModelPortal:Q9XE98
SMR:Q9XE98 EnsemblPlants:AT4G04370.1 GeneID:825757
KEGG:ath:AT4G04370 GeneFarm:4029 TAIR:At4g04370 eggNOG:NOG258182
HOGENOM:HOG000115634 InParanoid:Q9XE98 OMA:PDQQTFG PhylomeDB:Q9XE98
ProtClustDB:CLSN2685339 Genevestigator:Q9XE98 Uniprot:Q9XE98
Length = 729
Score = 114 (45.2 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 27/84 (32%), Positives = 42/84 (50%)
Query: 3 VTSCGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNV 62
V SC + G +R G+ + +SLI+ KCG +FE+M R++
Sbjct: 353 VASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDL 412
Query: 63 VSWTAIIAAFAQEWEVDMCYTFIV 86
VSW AII+ +AQ VD+C ++
Sbjct: 413 VSWNAIISGYAQN--VDLCKALLL 434
Score = 106 (42.4 bits), Expect = 7.6e-05, P = 7.6e-05
Identities = 22/70 (31%), Positives = 39/70 (55%)
Query: 5 SCGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNVVS 64
+C S + + G + +GF ++ Y+ SSL++ K G K+FE+M R+VV
Sbjct: 55 ACASLQRLSFGLSIHQQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVH 114
Query: 65 WTAIIAAFAQ 74
WTA+I +++
Sbjct: 115 WTAMIGCYSR 124
Score = 102 (41.0 bits), Expect = 0.00020, P = 0.00020
Identities = 19/64 (29%), Positives = 39/64 (60%)
Query: 7 GSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNVVSWT 66
G+ ++ G C V++GF ++++ ++LI+ KCG+ Y++ E +P ++VV WT
Sbjct: 256 GTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWT 315
Query: 67 AIIA 70
+I+
Sbjct: 316 VMIS 319
Score = 98 (39.6 bits), Expect = 0.00054, P = 0.00054
Identities = 25/75 (33%), Positives = 40/75 (53%)
Query: 2 PVTSCGSTRNIRGGTQYQCL---AVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMP 58
PVT + TQ QCL AV GF ++ V +S+++ KC D +F++M
Sbjct: 147 PVTLLEMLSGVLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQME 206
Query: 59 VRNVVSWTAIIAAFA 73
R++VSW +I+ +A
Sbjct: 207 QRDMVSWNTMISGYA 221
>TAIR|locus:2176927 [details] [associations]
symbol:AT5G52850 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0009507 EMBL:AB009055 Gene3D:1.25.40.10 PROSITE:PS51375
Pfam:PF01535 TIGRFAMs:TIGR00756 UniGene:At.29591 UniGene:At.66774
Pfam:PF13041 HOGENOM:HOG000237570 IPI:IPI00540501
RefSeq:NP_200097.1 ProteinModelPortal:Q9FLX6 SMR:Q9FLX6
EnsemblPlants:AT5G52850.1 GeneID:835362 KEGG:ath:AT5G52850
GeneFarm:3328 TAIR:At5g52850 eggNOG:NOG265214 InParanoid:Q9FLX6
OMA:NEFTFVK PhylomeDB:Q9FLX6 ProtClustDB:CLSN2686138
Genevestigator:Q9FLX6 Uniprot:Q9FLX6
Length = 893
Score = 115 (45.5 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 24/76 (31%), Positives = 41/76 (53%)
Query: 3 VTSCGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNV 62
V SC R+I G + +++GF N VGSSL KCG+ + ++F + +
Sbjct: 131 VRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADT 190
Query: 63 VSWTAIIAAF--AQEW 76
+SWT +I++ A++W
Sbjct: 191 ISWTMMISSLVGARKW 206
Score = 107 (42.7 bits), Expect = 7.6e-05, P = 7.6e-05
Identities = 21/59 (35%), Positives = 32/59 (54%)
Query: 15 GTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNVVSWTAIIAAFA 73
G C +V+SGF V +SL+ KCG D K+FE++ +VVSW +++ A
Sbjct: 547 GKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLA 605
Score = 103 (41.3 bits), Expect = 0.00020, P = 0.00020
Identities = 22/82 (26%), Positives = 40/82 (48%)
Query: 6 CGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGEN-IDVYKMFEKMPVRNVVS 64
C + R++ G Q ++ GF + VG++L+ KC + ++ ++F M NVVS
Sbjct: 335 CSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVS 394
Query: 65 WTAIIAAFAQEWEVDMCYTFIV 86
WT +I V C+ ++
Sbjct: 395 WTTLILGLVDHGFVQDCFGLLM 416
>TAIR|locus:2083961 [details] [associations]
symbol:AT3G53360 "AT3G53360" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 GO:GO:0005739
EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AL132966
Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756
Pfam:PF13041 HOGENOM:HOG000237569 IPI:IPI00530217 PIR:T45876
RefSeq:NP_190904.1 UniGene:At.53917 ProteinModelPortal:Q9LFI1
SMR:Q9LFI1 PRIDE:Q9LFI1 EnsemblPlants:AT3G53360.1 GeneID:824504
KEGG:ath:AT3G53360 GeneFarm:3704 TAIR:At3g53360 eggNOG:NOG266845
InParanoid:Q9LFI1 OMA:WNSILTA PhylomeDB:Q9LFI1
ProtClustDB:CLSN2684918 Genevestigator:Q9LFI1 Uniprot:Q9LFI1
Length = 768
Score = 114 (45.2 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 20/69 (28%), Positives = 38/69 (55%)
Query: 6 CGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNVVSW 65
C +++ G+Q C ++++G ++ + LI KCG ++F+ M R+VVSW
Sbjct: 483 CVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSW 542
Query: 66 TAIIAAFAQ 74
+ +I +AQ
Sbjct: 543 STLIVGYAQ 551
Score = 111 (44.1 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 21/72 (29%), Positives = 42/72 (58%)
Query: 3 VTSCGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNV 62
+ +C S+R++ G + + S + + + ++S GKCG D ++F+ MP RN+
Sbjct: 74 ICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNL 133
Query: 63 VSWTAIIAAFAQ 74
VS+T++I ++Q
Sbjct: 134 VSYTSVITGYSQ 145
>TAIR|locus:2118964 [details] [associations]
symbol:EMB2758 "embryo defective 2758" species:3702
"Arabidopsis thaliana" [GO:0005739 "mitochondrion" evidence=ISM]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=NAS] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002687
GenomeReviews:CT486007_GR Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AL031032 EMBL:AL161584 Pfam:PF01535 TIGRFAMs:TIGR00756
HOGENOM:HOG000237570 IPI:IPI00530295 PIR:T05227 RefSeq:NP_567948.1
UniGene:At.65452 ProteinModelPortal:O81767 SMR:O81767 PaxDb:O81767
PRIDE:O81767 EnsemblPlants:AT4G33990.1 GeneID:829546
KEGG:ath:AT4G33990 GeneFarm:3205 TAIR:At4g33990 eggNOG:NOG269748
InParanoid:O81767 OMA:GWSSMEV PhylomeDB:O81767
ProtClustDB:CLSN2917663 Genevestigator:O81767 Uniprot:O81767
Length = 823
Score = 114 (45.2 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 23/65 (35%), Positives = 40/65 (61%)
Query: 10 RNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNVVSWTAII 69
R + G + CLA++ GF+ +VYV +SLI + + +F++MPVR++ SW A+I
Sbjct: 164 RTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMI 223
Query: 70 AAFAQ 74
+ + Q
Sbjct: 224 SGYCQ 228
Score = 99 (39.9 bits), Expect = 0.00049, P = 0.00049
Identities = 18/70 (25%), Positives = 38/70 (54%)
Query: 3 VTSCGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNV 62
+++C + G +++ G + ++V + LI + G D K+F++M VR++
Sbjct: 254 LSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDL 313
Query: 63 VSWTAIIAAF 72
+SW +II A+
Sbjct: 314 ISWNSIIKAY 323
>TAIR|locus:2196583 [details] [associations]
symbol:ECB2 "EARLY CHLOROPLAST BIOGENESIS2" species:3702
"Arabidopsis thaliana" [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0009451 "RNA modification" evidence=IMP] [GO:0009658
"chloroplast organization" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0009416 "response to light stimulus"
evidence=IEP] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0040007 GO:GO:0009507 GO:GO:0009658
EMBL:AC013453 GO:GO:0009416 Gene3D:1.25.40.10 PROSITE:PS51375
Pfam:PF01535 Pfam:PF13812 TIGRFAMs:TIGR00756 GO:GO:0009451
Pfam:PF13041 HOGENOM:HOG000237570 IPI:IPI00522462 PIR:H86288
RefSeq:NP_173004.1 UniGene:At.41931 ProteinModelPortal:Q9M9E2
SMR:Q9M9E2 PRIDE:Q9M9E2 EnsemblPlants:AT1G15510.1 GeneID:838121
KEGG:ath:AT1G15510 GeneFarm:3519 TAIR:At1g15510 eggNOG:NOG295763
InParanoid:Q9M9E2 OMA:FCGHSER PhylomeDB:Q9M9E2 ProtClustDB:PLN03077
ArrayExpress:Q9M9E2 Genevestigator:Q9M9E2 Uniprot:Q9M9E2
Length = 866
Score = 114 (45.2 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 23/78 (29%), Positives = 45/78 (57%)
Query: 5 SCGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNVVS 64
+CG ++ G + VR G+ ++ V ++LI+ KCG+ +F++MP R+++S
Sbjct: 205 TCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIIS 264
Query: 65 WTAIIAAFAQEWEVDMCY 82
W A+I+ + +E MC+
Sbjct: 265 WNAMISGY---FENGMCH 279
Score = 105 (42.0 bits), Expect = 0.00012, P = 0.00012
Identities = 22/69 (31%), Positives = 43/69 (62%)
Query: 3 VTSCGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENID-VYKMFEKMPVRN 61
+++C + ++ G + LA+++ ++ V V ++LI+ KC + ID +F +P +N
Sbjct: 405 LSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKC-KCIDKALDIFHNIPRKN 463
Query: 62 VVSWTAIIA 70
V+SWT+IIA
Sbjct: 464 VISWTSIIA 472
>TAIR|locus:2129361 [details] [associations]
symbol:AT4G14050 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0016020 "membrane"
evidence=IDA] InterPro:IPR002885 GO:GO:0005739 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0016020 EMBL:Z97335 PROSITE:PS51375
EMBL:AL161537 Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041
HOGENOM:HOG000237570 EMBL:BX840233 IPI:IPI00528310 PIR:B85153
PIR:F71401 RefSeq:NP_193141.2 UniGene:At.49691
ProteinModelPortal:O23266 SMR:O23266 PRIDE:O23266
EnsemblPlants:AT4G14050.1 GeneID:827041 KEGG:ath:AT4G14050
GeneFarm:3176 TAIR:At4g14050 eggNOG:NOG258429 OMA:YSKCSDI
PhylomeDB:O23266 ProtClustDB:CLSN2690293 Genevestigator:O23266
Uniprot:O23266
Length = 612
Score = 112 (44.5 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 24/77 (31%), Positives = 40/77 (51%)
Query: 3 VTSCGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNV 62
V +C + G Q L + GF + V++ ++LI KC + I +F +M R+V
Sbjct: 245 VGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDV 304
Query: 63 VSWTAIIAAFAQEWEVD 79
VSWT++I AQ + +
Sbjct: 305 VSWTSLIVGMAQHGQAE 321
Score = 109 (43.4 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 22/72 (30%), Positives = 39/72 (54%)
Query: 3 VTSCGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNV 62
V +C + +I G Q C + S + + V SSL+ KCG +F+ + V+N
Sbjct: 112 VKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNT 171
Query: 63 VSWTAIIAAFAQ 74
+SWTA+++ +A+
Sbjct: 172 ISWTAMVSGYAK 183
>TAIR|locus:2032955 [details] [associations]
symbol:AT1G25360 "AT1G25360" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002684
GenomeReviews:CT485782_GR Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AC079374 Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041
HOGENOM:HOG000237570 IPI:IPI00533539 PIR:E86383 RefSeq:NP_173907.1
UniGene:At.41352 ProteinModelPortal:Q9FRI5 SMR:Q9FRI5
EnsemblPlants:AT1G25360.1 GeneID:839121 KEGG:ath:AT1G25360
GeneFarm:3520 TAIR:At1g25360 eggNOG:NOG253193 InParanoid:Q9FRI5
OMA:EPCDYAF PhylomeDB:Q9FRI5 ProtClustDB:CLSN2682612
Genevestigator:Q9FRI5 Uniprot:Q9FRI5
Length = 790
Score = 113 (44.8 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 24/72 (33%), Positives = 38/72 (52%)
Query: 3 VTSCGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNV 62
+ SC G QY ++ GF +++ G++LI+ KCG + ++F MP +
Sbjct: 424 IKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDS 483
Query: 63 VSWTAIIAAFAQ 74
VSW A+IAA Q
Sbjct: 484 VSWNALIAALGQ 495
Score = 96 (38.9 bits), Expect = 0.00098, P = 0.00098
Identities = 20/77 (25%), Positives = 41/77 (53%)
Query: 3 VTSCGSTRNIRGGTQYQCLAVR-SGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRN 61
+ +C + ++ G Q +R F + + +SL+S KCG+ + +FEKMP ++
Sbjct: 293 IRACATAGLLQLGKQVHAYVLRREDF--SFHFDNSLVSLYYKCGKFDEARAIFEKMPAKD 350
Query: 62 VVSWTAIIAAFAQEWEV 78
+VSW A+++ + +
Sbjct: 351 LVSWNALLSGYVSSGHI 367
>TAIR|locus:2028850 [details] [associations]
symbol:AT1G23450 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0009688 "abscisic
acid biosynthetic process" evidence=RCA] InterPro:IPR002885
EMBL:CP002684 PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756
IPI:IPI00526344 RefSeq:NP_173759.2 UniGene:At.74534
ProteinModelPortal:F4I671 PRIDE:F4I671 EnsemblPlants:AT1G23450.1
GeneID:838953 KEGG:ath:AT1G23450 OMA:SEDVISW ArrayExpress:F4I671
Uniprot:F4I671
Length = 666
Score = 112 (44.5 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 20/72 (27%), Positives = 40/72 (55%)
Query: 3 VTSCGSTRNIRGGTQYQCLAVRSGF-VANVYVGSSLISFCGKCGENIDVYKMFEKMPVRN 61
+ C R + G Q L V+SG+ ++N++V + L+ + CG+ + F +P ++
Sbjct: 220 IRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKD 279
Query: 62 VVSWTAIIAAFA 73
V+SW +I++ A
Sbjct: 280 VISWNSIVSVCA 291
>TAIR|locus:2181201 [details] [associations]
symbol:AT5G27110 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002688 GenomeReviews:BA000015_GR
Gene3D:1.25.40.10 EMBL:AF007271 PROSITE:PS51375 Pfam:PF01535
TIGRFAMs:TIGR00756 HOGENOM:HOG000237570 IPI:IPI00518722 PIR:T01808
RefSeq:NP_198063.1 UniGene:At.65555 UniGene:At.74336
ProteinModelPortal:O04659 SMR:O04659 STRING:O04659 PaxDb:O04659
PRIDE:O04659 EnsemblPlants:AT5G27110.1 GeneID:832769
KEGG:ath:AT5G27110 GeneFarm:4221 TAIR:At5g27110 eggNOG:NOG251542
OMA:SILMACS PhylomeDB:O04659 ProtClustDB:CLSN2686965
Genevestigator:O04659 Uniprot:O04659
Length = 691
Score = 111 (44.1 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 23/65 (35%), Positives = 36/65 (55%)
Query: 15 GTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNVVSWTAIIAAFAQ 74
G L V+SG+V +V V SSL+ K + ++F++MP R+V SW +I+ F Q
Sbjct: 126 GRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQ 185
Query: 75 EWEVD 79
E +
Sbjct: 186 SGEAE 190
Score = 107 (42.7 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 21/80 (26%), Positives = 45/80 (56%)
Query: 3 VTSCGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYK-MFEKMPVRN 61
+++C + G + V+ GF + YV S+L+ GKC + ++V + +F+KMP ++
Sbjct: 215 ISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKC-DCLEVAREVFQKMPRKS 273
Query: 62 VVSWTAIIAAFAQEWEVDMC 81
+V+W ++I + + + C
Sbjct: 274 LVAWNSMIKGYVAKGDSKSC 293
>TAIR|locus:2103483 [details] [associations]
symbol:OTP84 "ORGANELLE TRANSCRIPT PROCESSING 84"
species:3702 "Arabidopsis thaliana" [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0031425 "chloroplast RNA processing"
evidence=IMP] InterPro:IPR011990 InterPro:IPR002885 GO:GO:0009507
EMBL:CP002686 GenomeReviews:BA000014_GR Gene3D:1.25.40.10
EMBL:AL133248 PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756
GO:GO:0031425 Pfam:PF13041 HOGENOM:HOG000237570 EMBL:BT008634
IPI:IPI00527739 PIR:T46179 RefSeq:NP_191302.2 UniGene:At.34834
ProteinModelPortal:Q7Y211 SMR:Q7Y211 EnsemblPlants:AT3G57430.1
GeneID:824910 KEGG:ath:AT3G57430 GeneFarm:3528 TAIR:At3g57430
eggNOG:NOG252051 InParanoid:Q7Y211 OMA:VAKNLRV PhylomeDB:Q7Y211
ProtClustDB:CLSN2680439 Genevestigator:Q7Y211 Uniprot:Q7Y211
Length = 890
Score = 112 (44.5 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 21/68 (30%), Positives = 38/68 (55%)
Query: 5 SCGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNVVS 64
SC + + G + A+++ +V VGS+L+ KCG K+F+++P +NV++
Sbjct: 526 SCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVIT 585
Query: 65 WTAIIAAF 72
W II A+
Sbjct: 586 WNVIIMAY 593
Score = 104 (41.7 bits), Expect = 0.00016, P = 0.00016
Identities = 22/67 (32%), Positives = 41/67 (61%)
Query: 15 GTQYQCLAVRSGF-VANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNVVSWTAIIAAFA 73
G Q + G+ V +V V ++L++ KCG+ VYK+F+++ RN VSW ++I++
Sbjct: 116 GKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLC 175
Query: 74 --QEWEV 78
++WE+
Sbjct: 176 SFEKWEM 182
>TAIR|locus:2205200 [details] [associations]
symbol:OTP82 "AT1G08070" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0009507
"chloroplast" evidence=ISM] [GO:0031425 "chloroplast RNA
processing" evidence=IMP] InterPro:IPR011990 InterPro:IPR002885
EMBL:CP002684 GenomeReviews:CT485782_GR Gene3D:1.25.40.10
PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756 EMBL:AC026875
GO:GO:0031425 Pfam:PF12854 Pfam:PF13041 eggNOG:KOG4197
HOGENOM:HOG000237569 IPI:IPI00516672 RefSeq:NP_172286.1
UniGene:At.43030 ProteinModelPortal:Q9LN01 SMR:Q9LN01
EnsemblPlants:AT1G08070.1 GeneID:837325 KEGG:ath:AT1G08070
GeneFarm:3172 TAIR:At1g08070 InParanoid:Q9LN01 OMA:EEWKEGA
PhylomeDB:Q9LN01 ProtClustDB:CLSN2682772 Genevestigator:Q9LN01
Uniprot:Q9LN01
Length = 741
Score = 111 (44.1 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 25/75 (33%), Positives = 43/75 (57%)
Query: 5 SCGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNVVS 64
SC ++ + G Q ++ G ++YV +SLIS + G D +K+F+K P R+VVS
Sbjct: 143 SCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVS 202
Query: 65 WTAIIAAFAQEWEVD 79
+TA+I +A ++
Sbjct: 203 YTALIKGYASRGYIE 217
Score = 108 (43.1 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 21/70 (30%), Positives = 38/70 (54%)
Query: 3 VTSCGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNV 62
V++C + +I G Q GF +N+ + ++LI KCGE +FE++P ++V
Sbjct: 273 VSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDV 332
Query: 63 VSWTAIIAAF 72
+SW +I +
Sbjct: 333 ISWNTLIGGY 342
>TAIR|locus:2018668 [details] [associations]
symbol:AT1G28690 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005739 Gene3D:1.25.40.10 PROSITE:PS51375 CAZy:GT77
Pfam:PF01535 Pfam:PF13812 TIGRFAMs:TIGR00756 EMBL:AC007508
Pfam:PF13041 EMBL:DQ446304 EMBL:DQ652867 IPI:IPI00536155
RefSeq:NP_174190.2 UniGene:At.64385 ProteinModelPortal:Q1PFQ9
SMR:Q1PFQ9 PRIDE:Q1PFQ9 EnsemblPlants:AT1G28690.1 GeneID:839769
KEGG:ath:AT1G28690 GeneFarm:3600 TAIR:At1g28690 eggNOG:NOG291516
HOGENOM:HOG000240077 OMA:SMISGYM PhylomeDB:Q1PFQ9
ProtClustDB:CLSN2680730 Genevestigator:Q1PFQ9 Uniprot:Q1PFQ9
Length = 520
Score = 109 (43.4 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 21/72 (29%), Positives = 39/72 (54%)
Query: 3 VTSCGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNV 62
+ +C + G Q ++SG ++ +GSSL+ KCG D ++F++M +NV
Sbjct: 280 IGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNV 339
Query: 63 VSWTAIIAAFAQ 74
SWT++I + +
Sbjct: 340 FSWTSMIDGYGK 351
>TAIR|locus:2054966 [details] [associations]
symbol:AHG11 "ABA hypersensitive germination 11"
species:3702 "Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002685
GenomeReviews:CT485783_GR Gene3D:1.25.40.10 EMBL:AC002388
PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF12854
Pfam:PF13041 HOGENOM:HOG000237569 EMBL:DQ446623 IPI:IPI00525033
PIR:T00405 RefSeq:NP_182015.1 UniGene:At.65047
ProteinModelPortal:Q1PEU4 SMR:Q1PEU4 EnsemblPlants:AT2G44880.1
GeneID:819097 KEGG:ath:AT2G44880 GeneFarm:3679 TAIR:At2g44880
eggNOG:NOG250946 InParanoid:O22163 OMA:LCNSMIK PhylomeDB:Q1PEU4
ProtClustDB:CLSN2683321 Genevestigator:Q1PEU4 Uniprot:Q1PEU4
Length = 555
Score = 109 (43.4 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 24/76 (31%), Positives = 41/76 (53%)
Query: 5 SCGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNVVS 64
SC + + G Q R GF A++YV + ++ K G+ F++MP R+ VS
Sbjct: 87 SCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEVS 146
Query: 65 WTAIIAAFAQEWEVDM 80
WTA+I+ + + E+D+
Sbjct: 147 WTALISGYIRCGELDL 162
>TAIR|locus:2198811 [details] [associations]
symbol:MEF3 "AT1G06140" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0080156 "mitochondrial mRNA
modification" evidence=IMP] InterPro:IPR011990 InterPro:IPR002885
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005739
Gene3D:1.25.40.10 EMBL:AC024174 PROSITE:PS51375 Pfam:PF01535
TIGRFAMs:TIGR00756 Pfam:PF13041 GO:GO:0080156 HOGENOM:HOG000237569
IPI:IPI00535707 PIR:G86196 RefSeq:NP_172104.1 UniGene:At.51500
ProteinModelPortal:Q9LND4 SMR:Q9LND4 PaxDb:Q9LND4 PRIDE:Q9LND4
EnsemblPlants:AT1G06140.1 GeneID:837123 KEGG:ath:AT1G06140
GeneFarm:3612 TAIR:At1g06140 eggNOG:NOG307299 InParanoid:Q9LND4
OMA:VHGYMIR PhylomeDB:Q9LND4 ProtClustDB:CLSN2682285
Genevestigator:Q9LND4 Uniprot:Q9LND4
Length = 558
Score = 109 (43.4 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 24/71 (33%), Positives = 40/71 (56%)
Query: 3 VTSCGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYK-MFEKMPVRN 61
+ SC S ++R G +R+G + +S I +CG NI + + +F+ MP RN
Sbjct: 319 LVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCG-NIQMARTVFDMMPERN 377
Query: 62 VVSWTAIIAAF 72
V+SW+++I AF
Sbjct: 378 VISWSSMINAF 388
>TAIR|locus:2007888 [details] [associations]
symbol:AT1G17630 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:1.25.40.10 PROSITE:PS51375 EMBL:AC022492 Pfam:PF01535
TIGRFAMs:TIGR00756 Pfam:PF13041 HOGENOM:HOG000237569
IPI:IPI00541865 RefSeq:NP_173207.1 UniGene:At.51653
ProteinModelPortal:Q9LNP2 SMR:Q9LNP2 PaxDb:Q9LNP2 PRIDE:Q9LNP2
EnsemblPlants:AT1G17630.1 GeneID:838340 KEGG:ath:AT1G17630
GeneFarm:3636 TAIR:At1g17630 eggNOG:NOG260559 InParanoid:Q9LNP2
OMA:REIHGHV PhylomeDB:Q9LNP2 ProtClustDB:CLSN2682102
Genevestigator:Q9LNP2 Uniprot:Q9LNP2
Length = 731
Score = 110 (43.8 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 20/57 (35%), Positives = 35/57 (61%)
Query: 23 VRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNVVSWTAIIAAFAQEWEVD 79
++ G N++V + L++ K G D Y +F +MPVRN +SW +I F+QE++ +
Sbjct: 185 IQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCE 241
>TAIR|locus:2178188 [details] [associations]
symbol:MEF7 "AT5G09950" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0009451 "RNA modification"
evidence=IMP] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002688
GenomeReviews:BA000015_GR EMBL:AB016893 Gene3D:1.25.40.10
PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756 GO:GO:0009451
Pfam:PF13041 HOGENOM:HOG000237570 IPI:IPI00524906
RefSeq:NP_196557.1 UniGene:At.65502 ProteinModelPortal:Q9FIB2
SMR:Q9FIB2 PaxDb:Q9FIB2 PRIDE:Q9FIB2 EnsemblPlants:AT5G09950.1
GeneID:830856 KEGG:ath:AT5G09950 GeneFarm:3357 TAIR:At5g09950
eggNOG:NOG278872 InParanoid:Q9FIB2 OMA:SGYIHNE PhylomeDB:Q9FIB2
ProtClustDB:CLSN2687521 Genevestigator:Q9FIB2 Uniprot:Q9FIB2
Length = 995
Score = 111 (44.1 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 22/72 (30%), Positives = 39/72 (54%)
Query: 3 VTSCGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNV 62
+++ S + G + +VR+ ++V VGS+L+ KCG + F MPVRN
Sbjct: 626 LSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNS 685
Query: 63 VSWTAIIAAFAQ 74
SW ++I+ +A+
Sbjct: 686 YSWNSMISGYAR 697
Score = 99 (39.9 bits), Expect = 0.00061, P = 0.00061
Identities = 23/75 (30%), Positives = 38/75 (50%)
Query: 4 TSCGSTR-NIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNV 62
T+C T ++R Q C +SG + +++VGS L+S K G K+F +M RN
Sbjct: 215 TACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNA 274
Query: 63 VSWTAIIAAFA-QEW 76
V+ ++ Q+W
Sbjct: 275 VTLNGLMVGLVRQKW 289
>TAIR|locus:2206164 [details] [associations]
symbol:AT1G31430 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535 Pfam:PF13812
TIGRFAMs:TIGR00756 EMBL:AC027135 Pfam:PF12854 Pfam:PF13041
HOGENOM:HOG000237569 IPI:IPI00518213 PIR:C86440 RefSeq:NP_174428.1
UniGene:At.40342 UniGene:At.5353 ProteinModelPortal:Q9C866
SMR:Q9C866 PaxDb:Q9C866 EnsemblPlants:AT1G31430.1 GeneID:840033
KEGG:ath:AT1G31430 GeneFarm:3605 TAIR:At1g31430 eggNOG:NOG280522
InParanoid:Q9C866 OMA:NGYVQFN PhylomeDB:Q9C866
ProtClustDB:CLSN2682384 Genevestigator:Q9C866 Uniprot:Q9C866
Length = 570
Score = 108 (43.1 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 24/74 (32%), Positives = 42/74 (56%)
Query: 1 MPVT--SCGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMP 58
+PV S G R + G + AV++G + YV +SL+ G+ +K+F++MP
Sbjct: 49 LPVVLKSIGRLRKVIEGEKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMP 108
Query: 59 VRNVVSWTAIIAAF 72
R+VVSW +I+++
Sbjct: 109 QRDVVSWNGLISSY 122
>TAIR|locus:2082886 [details] [associations]
symbol:EMB2261 "embryo defective 2261" species:3702
"Arabidopsis thaliana" [GO:0009507 "chloroplast" evidence=ISM]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=IMP;NAS] InterPro:IPR011990 InterPro:IPR002885
GO:GO:0009507 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AL132956
GO:GO:0009793 Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535
TIGRFAMs:TIGR00756 Pfam:PF13041 HOGENOM:HOG000237570 EMBL:AY864347
EMBL:AY864348 IPI:IPI00540837 PIR:T45822 RefSeq:NP_190486.2
UniGene:At.35640 ProteinModelPortal:Q5G1T1 SMR:Q5G1T1 PRIDE:Q5G1T1
EnsemblPlants:AT3G49170.1 GeneID:824078 KEGG:ath:AT3G49170
GeneFarm:3524 TAIR:At3g49170 eggNOG:NOG255947 InParanoid:Q5G1T1
OMA:CALIDMF PhylomeDB:Q5G1T1 ProtClustDB:CLSN2918315
Genevestigator:Q5G1T1 Uniprot:Q5G1T1
Length = 850
Score = 110 (43.8 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 27/75 (36%), Positives = 40/75 (53%)
Query: 11 NIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNVVSWTAIIA 70
+IR G Q V+ G N V ++LIS KCG ++F M RNV+SWT++I
Sbjct: 489 SIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMIT 548
Query: 71 AFAQE-WEVDMCYTF 84
FA+ + + + TF
Sbjct: 549 GFAKHGFAIRVLETF 563
Score = 103 (41.3 bits), Expect = 0.00019, P = 0.00019
Identities = 25/72 (34%), Positives = 38/72 (52%)
Query: 4 TSCGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKC---GENIDVYKMFEKMPVR 60
++C N+ G Q A+RSG V +V SL+ KC G D K+F++M
Sbjct: 277 SACAELENLSLGKQLHSWAIRSGLVDDVEC--SLVDMYAKCSADGSVDDCRKVFDRMEDH 334
Query: 61 NVVSWTAIIAAF 72
+V+SWTA+I +
Sbjct: 335 SVMSWTALITGY 346
>TAIR|locus:2047017 [details] [associations]
symbol:AT2G21090 "AT2G21090" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002685
GenomeReviews:CT485783_GR Gene3D:1.25.40.10 PROSITE:PS51375
Pfam:PF01535 Pfam:PF13812 TIGRFAMs:TIGR00756 EMBL:AC006264
Pfam:PF12854 Pfam:PF13041 HOGENOM:HOG000237569 EMBL:BX820424
IPI:IPI00532746 PIR:A84597 RefSeq:NP_179705.1 UniGene:At.49547
ProteinModelPortal:Q9SKQ4 SMR:Q9SKQ4 STRING:Q9SKQ4
EnsemblPlants:AT2G21090.1 GeneID:816644 KEGG:ath:AT2G21090
GeneFarm:3691 TAIR:At2g21090 eggNOG:NOG309199 InParanoid:Q9SKQ4
OMA:FSSCLCA PhylomeDB:Q9SKQ4 ProtClustDB:CLSN2683569
Genevestigator:Q9SKQ4 Uniprot:Q9SKQ4
Length = 597
Score = 108 (43.1 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 20/72 (27%), Positives = 42/72 (58%)
Query: 3 VTSCGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNV 62
+T+C +R ++ Q + +GF++NV + S+I KCG+ + F++M V+++
Sbjct: 186 LTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDI 245
Query: 63 VSWTAIIAAFAQ 74
WT +I+ +A+
Sbjct: 246 HIWTTLISGYAK 257
Score = 105 (42.0 bits), Expect = 7.5e-05, P = 7.5e-05
Identities = 22/71 (30%), Positives = 43/71 (60%)
Query: 6 CGSTRNIRGGTQ-YQCLAVRSGFVA-NVYVGSSLISFCGKCGENIDVYKMFEKMPVRNVV 63
CG T++++ G ++ L + +GF N + + LI KCG+ ID K+F++M +RN+
Sbjct: 56 CGDTKSLKQGKWIHRHLKI-TGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLY 114
Query: 64 SWTAIIAAFAQ 74
SW +++ + +
Sbjct: 115 SWNNMVSGYVK 125
>TAIR|locus:2034456 [details] [associations]
symbol:AT1G31920 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0010075 "regulation of
meristem growth" evidence=RCA] [GO:0016556 "mRNA modification"
evidence=RCA] InterPro:IPR002885 EMBL:CP002684
GenomeReviews:CT485782_GR EMBL:AC079041 PROSITE:PS51375
Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041 HOGENOM:HOG000237569
EMBL:AK226634 IPI:IPI00541310 PIR:D86443 RefSeq:NP_174474.1
UniGene:At.17278 ProteinModelPortal:Q9C6T2 SMR:Q9C6T2
EnsemblPlants:AT1G31920.1 GeneID:840082 KEGG:ath:AT1G31920
GeneFarm:3171 TAIR:At1g31920 eggNOG:NOG324786 InParanoid:Q9C6T2
OMA:MEWQLKF PhylomeDB:Q9C6T2 ProtClustDB:CLSN2682592
Genevestigator:Q9C6T2 Uniprot:Q9C6T2
Length = 606
Score = 108 (43.1 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 23/69 (33%), Positives = 40/69 (57%)
Query: 5 SCGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNVVS 64
+C ++IR G Q + G A+V+V +SLI+ G+CGE +FEK+ + S
Sbjct: 141 ACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAAS 200
Query: 65 WTAIIAAFA 73
W+++++A A
Sbjct: 201 WSSMVSARA 209
>TAIR|locus:2130644 [details] [associations]
symbol:AT4G15720 "AT4G15720" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002687
GenomeReviews:CT486007_GR Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:Z97339 Pfam:PF01535 TIGRFAMs:TIGR00756 EMBL:AL161542
HOGENOM:HOG000237570 EMBL:AY072074 EMBL:AY096603 IPI:IPI00537442
PIR:D71422 RefSeq:NP_193307.2 UniGene:At.33147 UniGene:At.48860
ProteinModelPortal:Q8VYH0 SMR:Q8VYH0 PRIDE:Q8VYH0
EnsemblPlants:AT4G15720.1 GeneID:827250 KEGG:ath:AT4G15720
GeneFarm:3138 TAIR:At4g15720 eggNOG:NOG266566 InParanoid:Q8VYH0
OMA:DCHEAFK PhylomeDB:Q8VYH0 ProtClustDB:CLSN2690297
Genevestigator:Q8VYH0 Uniprot:Q8VYH0
Length = 616
Score = 108 (43.1 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 26/72 (36%), Positives = 37/72 (51%)
Query: 5 SCGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPV--RNV 62
+C + R G SG N+ V SSL+ GKC + ++F+ M RNV
Sbjct: 140 ACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDVETARRVFDSMIGYGRNV 199
Query: 63 VSWTAIIAAFAQ 74
VSWT++I A+AQ
Sbjct: 200 VSWTSMITAYAQ 211
Score = 98 (39.6 bits), Expect = 0.00044, P = 0.00044
Identities = 21/72 (29%), Positives = 39/72 (54%)
Query: 3 VTSCGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNV 62
+++C S ++ G L R G+ +N V +SL+ KCG K+F ++ +V
Sbjct: 243 ISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSV 302
Query: 63 VSWTAIIAAFAQ 74
+S+T++I A A+
Sbjct: 303 ISYTSMIMAKAK 314
>TAIR|locus:2198546 [details] [associations]
symbol:AT1G20230 "AT1G20230" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:1.25.40.10 PROSITE:PS51375 EMBL:AC022472 Pfam:PF01535
TIGRFAMs:TIGR00756 Pfam:PF13041 HOGENOM:HOG000237570
IPI:IPI00518181 PIR:A86336 RefSeq:NP_173449.1 UniGene:At.41719
ProteinModelPortal:Q9LNU6 SMR:Q9LNU6 PRIDE:Q9LNU6
EnsemblPlants:AT1G20230.1 GeneID:838612 KEGG:ath:AT1G20230
GeneFarm:3206 TAIR:At1g20230 eggNOG:NOG298463 InParanoid:Q9LNU6
OMA:CHAVIKF PhylomeDB:Q9LNU6 ProtClustDB:CLSN2682959
Genevestigator:Q9LNU6 Uniprot:Q9LNU6
Length = 760
Score = 109 (43.4 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 24/70 (34%), Positives = 40/70 (57%)
Query: 5 SCGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKM-FEKMPVRNVV 63
+CG+ + G AVR + NV+VGS+LI KCG I++ ++ F MP +N+V
Sbjct: 397 ACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGR-INLSQIVFNMMPTKNLV 455
Query: 64 SWTAIIAAFA 73
W +++ F+
Sbjct: 456 CWNSLMNGFS 465
Score = 96 (38.9 bits), Expect = 0.00093, P = 0.00093
Identities = 19/70 (27%), Positives = 38/70 (54%)
Query: 6 CGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNVVSW 65
C + G Q C++ SG + +V S+ +CG D K+F++M ++VV+
Sbjct: 126 CAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTC 185
Query: 66 TAIIAAFAQE 75
+A++ A+A++
Sbjct: 186 SALLCAYARK 195
>TAIR|locus:2127801 [details] [associations]
symbol:AT4G32430 "AT4G32430" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 GO:GO:0005739
EMBL:CP002687 GenomeReviews:CT486007_GR Gene3D:1.25.40.10
PROSITE:PS51375 EMBL:AL161581 EMBL:AL034567 Pfam:PF01535
TIGRFAMs:TIGR00756 Pfam:PF13041 EMBL:BT006447 EMBL:AK227348
IPI:IPI00528564 PIR:T05353 RefSeq:NP_194969.2 UniGene:At.31663
ProteinModelPortal:Q84MA3 SMR:Q84MA3 PRIDE:Q84MA3
EnsemblPlants:AT4G32430.1 GeneID:829378 KEGG:ath:AT4G32430
GeneFarm:4023 TAIR:At4g32430 eggNOG:NOG280004 HOGENOM:HOG000242511
InParanoid:Q84MA3 OMA:ITMYAKF PhylomeDB:Q84MA3
ProtClustDB:CLSN2680228 Genevestigator:Q84MA3 Uniprot:Q84MA3
Length = 763
Score = 109 (43.4 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 23/63 (36%), Positives = 36/63 (57%)
Query: 12 IRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNVVSWTAIIAA 71
I+ G + L +++GFV+ VG+S I+ K D K FE + R ++SW A+I+
Sbjct: 388 IKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISG 447
Query: 72 FAQ 74
FAQ
Sbjct: 448 FAQ 450
Score = 106 (42.4 bits), Expect = 8.0e-05, P = 8.0e-05
Identities = 23/69 (33%), Positives = 40/69 (57%)
Query: 3 VTSCGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNV 62
+T+C +++ Q L ++ G+ + + VG+ L+S KCG V +F +M RNV
Sbjct: 283 ITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNV 342
Query: 63 VSWTAIIAA 71
VSWT +I++
Sbjct: 343 VSWTTMISS 351
Score = 96 (38.9 bits), Expect = 0.00094, P = 0.00094
Identities = 17/70 (24%), Positives = 39/70 (55%)
Query: 6 CGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNVVSW 65
C + G Q Q V++G +++ VG+S I+ + G ++F++M ++++SW
Sbjct: 184 CVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISW 243
Query: 66 TAIIAAFAQE 75
++++ +QE
Sbjct: 244 NSLLSGLSQE 253
>TAIR|locus:2124137 [details] [associations]
symbol:DOT4 "DEFECTIVELY ORGANIZED TRIBUTARIES 4"
species:3702 "Arabidopsis thaliana" [GO:0009507 "chloroplast"
evidence=ISM] [GO:0010087 "phloem or xylem histogenesis"
evidence=IMP] [GO:0010305 "leaf vascular tissue pattern formation"
evidence=IMP] [GO:0010588 "cotyledon vascular tissue pattern
formation" evidence=IMP] [GO:0048366 "leaf development"
evidence=IMP] InterPro:IPR011990 InterPro:IPR002885 GO:GO:0009507
EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL161549
Gene3D:1.25.40.10 PROSITE:PS51375 GO:GO:0010087 GO:GO:0048366
GO:GO:0010305 Pfam:PF01535 TIGRFAMs:TIGR00756 EMBL:AL035526
GO:GO:0010588 Pfam:PF13041 HOGENOM:HOG000237570 EMBL:AK221529
IPI:IPI00547122 PIR:T04867 RefSeq:NP_193610.1 UniGene:At.54400
ProteinModelPortal:Q9SN39 SMR:Q9SN39 PaxDb:Q9SN39 PRIDE:Q9SN39
EnsemblPlants:AT4G18750.1 GeneID:827609 KEGG:ath:AT4G18750
GeneFarm:3432 TAIR:At4g18750 eggNOG:NOG288811 InParanoid:Q9SN39
OMA:EGWRFFN PhylomeDB:Q9SN39 ProtClustDB:CLSN2685451
Genevestigator:Q9SN39 Uniprot:Q9SN39
Length = 871
Score = 109 (43.4 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 25/69 (36%), Positives = 41/69 (59%)
Query: 5 SCGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENID-VYKMFEKMPVRNVV 63
S S R++ GG Q ++SGF VG+SL++F K + +D K+F++M R+V+
Sbjct: 204 SFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLK-NQRVDSARKVFDEMTERDVI 262
Query: 64 SWTAIIAAF 72
SW +II +
Sbjct: 263 SWNSIINGY 271
Score = 99 (39.9 bits), Expect = 0.00053, P = 0.00053
Identities = 18/68 (26%), Positives = 38/68 (55%)
Query: 5 SCGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNVVS 64
+C S G + +R+G+ ++ +V +SL+ KCG + + +F+ + +++VS
Sbjct: 508 ACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVS 567
Query: 65 WTAIIAAF 72
WT +IA +
Sbjct: 568 WTVMIAGY 575
>TAIR|locus:2097410 [details] [associations]
symbol:AT3G49740 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002686 GenomeReviews:BA000014_GR
EMBL:AL132965 Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535
TIGRFAMs:TIGR00756 Pfam:PF12854 Pfam:PF13041 IPI:IPI00544594
PIR:T46040 RefSeq:NP_190543.1 UniGene:At.35573
ProteinModelPortal:Q9M2Y4 SMR:Q9M2Y4 PRIDE:Q9M2Y4
EnsemblPlants:AT3G49740.1 GeneID:824136 KEGG:ath:AT3G49740
GeneFarm:3703 TAIR:At3g49740 eggNOG:NOG307462 HOGENOM:HOG000115631
InParanoid:Q9M2Y4 OMA:EFTFGSL PhylomeDB:Q9M2Y4
ProtClustDB:CLSN2684366 Genevestigator:Q9M2Y4 Uniprot:Q9M2Y4
Length = 737
Score = 108 (43.1 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 21/72 (29%), Positives = 42/72 (58%)
Query: 6 CGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNVVSW 65
C ST ++ G+Q +R G +G++LI+ +CG + ++F +M ++VVSW
Sbjct: 499 CVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSEKDVVSW 558
Query: 66 TAIIAAFAQEWE 77
++I+A+++ E
Sbjct: 559 NSLISAYSRHGE 570
Score = 103 (41.3 bits), Expect = 0.00016, P = 0.00016
Identities = 23/86 (26%), Positives = 47/86 (54%)
Query: 1 MPVTSCGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVR 60
+ +T+ R+ G Q C A+RSG + + +V ++L+S + G + K F+++
Sbjct: 62 LAITTARHLRDTIFGGQVHCYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEP 121
Query: 61 NVVSWTAIIAAFAQEWEVDMCYTFIV 86
+V SWT +++A + +++ Y F V
Sbjct: 122 DVYSWTTLLSASFKLGDIE--YAFEV 145
>TAIR|locus:2057630 [details] [associations]
symbol:AT2G33680 "AT2G33680" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:1.25.40.10 PROSITE:PS51375 EMBL:U78721 Pfam:PF01535
Pfam:PF13812 TIGRFAMs:TIGR00756 HOGENOM:HOG000237570
IPI:IPI00531746 PIR:C84748 RefSeq:NP_180924.1 UniGene:At.66302
ProteinModelPortal:P93005 SMR:P93005 EnsemblPlants:AT2G33680.1
GeneID:817933 KEGG:ath:AT2G33680 GeneFarm:3665 TAIR:At2g33680
eggNOG:NOG291314 InParanoid:P93005 OMA:NSITWSA PhylomeDB:P93005
ProtClustDB:CLSN2683505 Genevestigator:P93005 Uniprot:P93005
Length = 727
Score = 107 (42.7 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 19/75 (25%), Positives = 42/75 (56%)
Query: 3 VTSCGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNV 62
++S +T + G Q C+ +++G + V + ++L++ KC + KMF+ RN
Sbjct: 228 LSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNS 287
Query: 63 VSWTAIIAAFAQEWE 77
++W+A++ ++Q E
Sbjct: 288 ITWSAMVTGYSQNGE 302
Score = 106 (42.4 bits), Expect = 7.6e-05, P = 7.5e-05
Identities = 23/75 (30%), Positives = 38/75 (50%)
Query: 5 SCGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNVVS 64
+C S + G Q ++ GF V +GS+L + KCG D +F + P ++VVS
Sbjct: 432 ACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVS 491
Query: 65 WTAIIAAFAQEWEVD 79
W A+I+ + + D
Sbjct: 492 WNAMISGLSHNGQGD 506
Score = 98 (39.6 bits), Expect = 0.00054, P = 0.00054
Identities = 20/81 (24%), Positives = 39/81 (48%)
Query: 3 VTSCGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNV 62
+T RN+ G +R+G + + L++F KCG+ + +F + ++V
Sbjct: 21 LTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDV 80
Query: 63 VSWTAIIAAFAQEWEVDMCYT 83
VSW ++I ++Q + YT
Sbjct: 81 VSWNSLITGYSQNGGISSSYT 101
Score = 96 (38.9 bits), Expect = 0.00089, P = 0.00089
Identities = 20/65 (30%), Positives = 33/65 (50%)
Query: 15 GTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNVVSWTAIIAAFAQ 74
G Q L V+ ++YV +SL+ K G D K+F MP RN +W+ +++ +A
Sbjct: 137 GRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYAT 196
Query: 75 EWEVD 79
V+
Sbjct: 197 RGRVE 201
>TAIR|locus:2059687 [details] [associations]
symbol:AT2G17210 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] InterPro:IPR002885
EMBL:CP002685 GenomeReviews:CT485783_GR PROSITE:PS51375
Pfam:PF01535 TIGRFAMs:TIGR00756 EMBL:AC007127 Pfam:PF13041
IPI:IPI00518475 IPI:IPI01019973 PIR:D84549 RefSeq:NP_179312.1
UniGene:At.66215 ProteinModelPortal:Q9SII7 SMR:Q9SII7 GeneID:816226
KEGG:ath:AT2G17210 GeneFarm:3688 TAIR:At2g17210 eggNOG:NOG312556
HOGENOM:HOG000093021 InParanoid:Q9SII7 PhylomeDB:Q9SII7
ProtClustDB:CLSN2683785 ArrayExpress:Q9SII7 Genevestigator:Q9SII7
Uniprot:Q9SII7
Length = 736
Score = 107 (42.7 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 25/77 (32%), Positives = 43/77 (55%)
Query: 5 SCGSTRNIRGGTQYQCLAVRSGF-VANVYVGSSLISFCGKCGENID-VYKMFEKMPVRNV 62
+C +I G ++R GF +A+V+V +SLI K G ++D +++F++ RN+
Sbjct: 256 ACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSK-GFDVDSAFRVFDETTCRNI 314
Query: 63 VSWTAIIAAFAQEWEVD 79
VSW +I+A F D
Sbjct: 315 VSWNSILAGFVHNQRYD 331
Score = 103 (41.3 bits), Expect = 0.00016, P = 0.00016
Identities = 20/72 (27%), Positives = 40/72 (55%)
Query: 3 VTSCGSTRNIRGGTQYQCLAVRSGFVAN-VYVGSSLISFCGKCGENIDVYKMFEKMPVRN 61
+ +C + ++R +A+R N + VG+S++ KCG + F+++ +N
Sbjct: 454 LNACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKN 513
Query: 62 VVSWTAIIAAFA 73
++SWT II+A+A
Sbjct: 514 IISWTVIISAYA 525
>TAIR|locus:2150936 [details] [associations]
symbol:AT5G15340 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR002885 GO:GO:0005739
EMBL:CP002688 GenomeReviews:BA000015_GR PROSITE:PS51375
EMBL:AL353993 Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041
HOGENOM:HOG000237569 IPI:IPI00531606 PIR:T49969 RefSeq:NP_197038.1
UniGene:At.66725 ProteinModelPortal:Q9LXE8 SMR:Q9LXE8 PRIDE:Q9LXE8
EnsemblPlants:AT5G15340.1 GeneID:831386 KEGG:ath:AT5G15340
GeneFarm:3539 TAIR:At5g15340 eggNOG:NOG317118 InParanoid:Q9LXE8
OMA:SEKLAVC PhylomeDB:Q9LXE8 ProtClustDB:CLSN2687457
Genevestigator:Q9LXE8 Uniprot:Q9LXE8
Length = 623
Score = 106 (42.4 bits), Expect = 6.2e-05, P = 6.2e-05
Identities = 22/72 (30%), Positives = 41/72 (56%)
Query: 6 CGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNVVSW 65
C ++ Q +AV+ G + +V V ++L+ GKCG +V ++FE++ ++VVSW
Sbjct: 121 CAKLEDLGFAQQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSW 180
Query: 66 TAIIAAFAQEWE 77
T ++ + WE
Sbjct: 181 TVVLDTVVK-WE 191
>TAIR|locus:2039817 [details] [associations]
symbol:AT2G39620 "AT2G39620" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002685
GenomeReviews:CT485783_GR EMBL:AC004218 Gene3D:1.25.40.10
PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041
IPI:IPI00546453 PIR:T00570 RefSeq:NP_181492.1 UniGene:At.66334
ProteinModelPortal:O80647 SMR:O80647 EnsemblPlants:AT2G39620.1
GeneID:818545 KEGG:ath:AT2G39620 GeneFarm:3675 TAIR:At2g39620
eggNOG:NOG285557 HOGENOM:HOG000115625 InParanoid:O80647 OMA:ATAVISM
PhylomeDB:O80647 ProtClustDB:CLSN2683357 Genevestigator:O80647
Uniprot:O80647
Length = 836
Score = 107 (42.7 bits), Expect = 7.0e-05, P = 7.0e-05
Identities = 23/58 (39%), Positives = 37/58 (63%)
Query: 22 AVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNVVSWTAIIAAFAQEWEVD 79
AV+ G + +V V +SL+S KCGE ++F + R+VVSW+A+IA++ Q + D
Sbjct: 326 AVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHD 383
Score = 107 (42.7 bits), Expect = 7.0e-05, P = 7.0e-05
Identities = 18/70 (25%), Positives = 40/70 (57%)
Query: 5 SCGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNVVS 64
+C + + + G + L G ++VY+G++L+ K + + ++F+KM V++VV+
Sbjct: 109 ACAGSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVT 168
Query: 65 WTAIIAAFAQ 74
W +++ AQ
Sbjct: 169 WNTMVSGLAQ 178
>TAIR|locus:2130354 [details] [associations]
symbol:AT4G14820 "AT4G14820" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0009507 "chloroplast"
evidence=ISM] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002687
GenomeReviews:CT486007_GR Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AL161540 EMBL:Z97337 Pfam:PF01535 TIGRFAMs:TIGR00756
Pfam:PF12854 HOGENOM:HOG000237569 IPI:IPI00529570 PIR:C71411
RefSeq:NP_193218.1 UniGene:At.65379 ProteinModelPortal:O23337
SMR:O23337 EnsemblPlants:AT4G14820.1 GeneID:827139
KEGG:ath:AT4G14820 GeneFarm:3141 TAIR:At4g14820 eggNOG:NOG309125
InParanoid:O23337 OMA:VLWHSEK PhylomeDB:O23337
ProtClustDB:CLSN2685361 Genevestigator:O23337 Uniprot:O23337
Length = 722
Score = 106 (42.4 bits), Expect = 7.5e-05, P = 7.5e-05
Identities = 23/61 (37%), Positives = 39/61 (63%)
Query: 18 YQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYK-MFEKMPVRNVVSWTAIIAAFAQEW 76
+ C+ V +G + + + ++LI+ KCG +D + +FEKMP RNVVSW+++I A +
Sbjct: 367 HSCIHV-NGLESELSINNALINMYAKCG-GLDATRDVFEKMPRRNVVSWSSMINALSMHG 424
Query: 77 E 77
E
Sbjct: 425 E 425
>TAIR|locus:2056794 [details] [associations]
symbol:REME1 "required for efficiency of mitochondrial
editing 1" species:3702 "Arabidopsis thaliana" [GO:0005739
"mitochondrion" evidence=ISM;IDA] [GO:0009451 "RNA modification"
evidence=IMP] InterPro:IPR011990 InterPro:IPR002885 GO:GO:0005739
EMBL:CP002685 GenomeReviews:CT485783_GR Gene3D:1.25.40.10
PROSITE:PS51375 Pfam:PF01535 Pfam:PF13812 TIGRFAMs:TIGR00756
GO:GO:0009451 Pfam:PF12854 Pfam:PF13041 HOGENOM:HOG000237570
EMBL:AC007196 EMBL:BT003840 IPI:IPI00519155 PIR:C84453
RefSeq:NP_178481.1 UniGene:At.41363 ProteinModelPortal:Q9SI53
SMR:Q9SI53 PRIDE:Q9SI53 EnsemblPlants:AT2G03880.1 GeneID:814914
KEGG:ath:AT2G03880 GeneFarm:3431 TAIR:At2g03880 eggNOG:NOG254665
InParanoid:Q9SI53 OMA:FRSMKKL PhylomeDB:Q9SI53
ProtClustDB:CLSN2683857 Genevestigator:Q9SI53 Uniprot:Q9SI53
Length = 630
Score = 105 (42.0 bits), Expect = 8.0e-05, P = 8.0e-05
Identities = 23/76 (30%), Positives = 38/76 (50%)
Query: 5 SCGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNVVS 64
SC ++R C ++ G ++V+V S+LI K GE D +F++M + +
Sbjct: 171 SCNGMSDVR---MLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIV 227
Query: 65 WTAIIAAFAQEWEVDM 80
W +II FAQ D+
Sbjct: 228 WNSIIGGFAQNSRSDV 243
>TAIR|locus:4515103421 [details] [associations]
symbol:AT4G19191 "AT4G19191" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 GO:GO:0005739
EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL021687 EMBL:AL161550
Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756
eggNOG:NOG310150 Pfam:PF13041 IPI:IPI00529517 PIR:T04440
RefSeq:NP_001119013.1 UniGene:At.74330 ProteinModelPortal:P0C8Q2
SMR:P0C8Q2 PRIDE:P0C8Q2 EnsemblPlants:AT4G19191.1 GeneID:6240220
KEGG:ath:AT4G19191 TAIR:At4g19191 HOGENOM:HOG000115637 OMA:KRDVASW
PhylomeDB:P0C8Q2 ProtClustDB:CLSN2708526 Genevestigator:P0C8Q2
Uniprot:P0C8Q2
Length = 654
Score = 105 (42.0 bits), Expect = 8.4e-05, P = 8.4e-05
Identities = 19/62 (30%), Positives = 38/62 (61%)
Query: 23 VRSGFVANVYVGSSLISFCGKCGENID-VYKMFEKMPVRNVVSWTAIIAAFAQEWEVDMC 81
++S F ++V+VG++ + KC ++D K+FE+MP R+ +W A+++ F Q D
Sbjct: 79 IKSPFWSDVFVGTATVDMFVKCN-SVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKA 137
Query: 82 YT 83
++
Sbjct: 138 FS 139
>TAIR|locus:2177537 [details] [associations]
symbol:EMB3141 "AT5G50390" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0009507
"chloroplast" evidence=ISM] InterPro:IPR011990 InterPro:IPR002885
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009507
Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756
EMBL:AB012248 Pfam:PF13041 HOGENOM:HOG000237570 IPI:IPI00532811
RefSeq:NP_199850.1 UniGene:At.65663 ProteinModelPortal:Q9FK33
SMR:Q9FK33 EnsemblPlants:AT5G50390.1 GeneID:835107
KEGG:ath:AT5G50390 GeneFarm:3443 TAIR:At5g50390 eggNOG:NOG255376
InParanoid:Q9FK33 OMA:PRAMHYA PhylomeDB:Q9FK33 ProtClustDB:PLN03081
Genevestigator:Q9FK33 Uniprot:Q9FK33
Length = 701
Score = 105 (42.0 bits), Expect = 9.2e-05, P = 9.2e-05
Identities = 22/59 (37%), Positives = 30/59 (50%)
Query: 15 GTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNVVSWTAIIAAFA 73
G Q A++ G V N +V LI KCG+ D FE MP + V+W +IA +A
Sbjct: 243 GKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYA 301
Score = 98 (39.6 bits), Expect = 0.00052, P = 0.00052
Identities = 16/52 (30%), Positives = 34/52 (65%)
Query: 23 VRSGFVANVYVGSSLISFCGKCGENIDVYK-MFEKMPVRNVVSWTAIIAAFA 73
+R+GF + + ++L+ F K G +D + +F+K+P +N++SW A++ +A
Sbjct: 352 IRNGFESEIVANTALVDFYSKWGR-VDTARYVFDKLPRKNIISWNALMGGYA 402
>TAIR|locus:2102514 [details] [associations]
symbol:AT3G56550 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR002885 EMBL:CP002686
GenomeReviews:BA000014_GR PROSITE:PS51375 EMBL:AL163972
Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041 HOGENOM:HOG000237569
EMBL:DQ446769 IPI:IPI00541669 PIR:T49056 RefSeq:NP_191214.1
UniGene:At.65282 ProteinModelPortal:Q9LXY5 SMR:Q9LXY5
EnsemblPlants:AT3G56550.1 GeneID:824822 KEGG:ath:AT3G56550
GeneFarm:3526 TAIR:At3g56550 eggNOG:NOG269480 InParanoid:Q9LXY5
OMA:CSHQGLV PhylomeDB:Q9LXY5 ProtClustDB:CLSN2684194
Genevestigator:Q9LXY5 Uniprot:Q9LXY5
Length = 581
Score = 104 (41.7 bits), Expect = 9.3e-05, P = 9.3e-05
Identities = 22/70 (31%), Positives = 41/70 (58%)
Query: 5 SCGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVY-KMFEKMPVRNVV 63
SC ++I + +RSGF+ + V +SL+ C ++++ K+F++MPVR++V
Sbjct: 116 SCERIKSIPKCLEIHGSVIRSGFLDDAIVATSLVR-CYSANGSVEIASKVFDEMPVRDLV 174
Query: 64 SWTAIIAAFA 73
SW +I F+
Sbjct: 175 SWNVMICCFS 184
>TAIR|locus:2019130 [details] [associations]
symbol:OTP87 "organelle transcript processing 87"
species:3702 "Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0009507 "chloroplast" evidence=IDA]
[GO:0080156 "mitochondrial mRNA modification" evidence=IMP]
InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005739 GO:GO:0009507
Gene3D:1.25.40.10 PROSITE:PS51375 EMBL:AC011765 Pfam:PF01535
TIGRFAMs:TIGR00756 Pfam:PF13041 IPI:IPI00548519 PIR:B96775
RefSeq:NP_177599.1 UniGene:At.34861 ProteinModelPortal:Q9CA56
SMR:Q9CA56 PRIDE:Q9CA56 EnsemblPlants:AT1G74600.1 GeneID:843800
KEGG:ath:AT1G74600 GeneFarm:3629 TAIR:At1g74600 eggNOG:NOG278390
HOGENOM:HOG000243138 InParanoid:Q9CA56 OMA:SYAQHGK PhylomeDB:Q9CA56
ProtClustDB:CLSN2682261 ArrayExpress:Q9CA56 Genevestigator:Q9CA56
GO:GO:0080156 Uniprot:Q9CA56
Length = 895
Score = 106 (42.4 bits), Expect = 9.7e-05, P = 9.7e-05
Identities = 20/58 (34%), Positives = 34/58 (58%)
Query: 15 GTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNVVSWTAIIAAF 72
G Q ++SG V ++ VGSSL + KCG + YK+F+ +P ++ W ++I+ F
Sbjct: 469 GKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGF 526
Score = 105 (42.0 bits), Expect = 0.00012, P = 0.00012
Identities = 18/72 (25%), Positives = 40/72 (55%)
Query: 3 VTSCGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNV 62
+ +C S +R G Q ++ G +V+V ++++ KCG + ++F ++P +V
Sbjct: 258 LAACASLEKLRFGKVVQARVIKCG-AEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSV 316
Query: 63 VSWTAIIAAFAQ 74
VSWT +++ + +
Sbjct: 317 VSWTVMLSGYTK 328
>TAIR|locus:505006163 [details] [associations]
symbol:AT1G32415 "AT1G32415" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005739 EMBL:AC007767
Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535 Pfam:PF13812
TIGRFAMs:TIGR00756 Pfam:PF12854 Pfam:PF13041 HOGENOM:HOG000237570
IPI:IPI00540324 PIR:B86449 RefSeq:NP_564401.1 UniGene:At.51879
ProteinModelPortal:P0C7R0 SMR:P0C7R0 PaxDb:P0C7R0 PRIDE:P0C7R0
EnsemblPlants:AT1G32415.1 GeneID:840135 KEGG:ath:AT1G32415
GeneFarm:3603 TAIR:At1g32415 eggNOG:NOG260565 OMA:ISLAYAC
PhylomeDB:P0C7R0 ProtClustDB:CLSN2688200 Genevestigator:P0C7R0
Uniprot:P0C7R0
Length = 761
Score = 105 (42.0 bits), Expect = 0.00010, P = 0.00010
Identities = 22/79 (27%), Positives = 42/79 (53%)
Query: 3 VTSCGSTRNIRGGTQYQCLAVRSG--FVANVYVGSSLISFCGKCGENIDVYKMFEKMPVR 60
++S G+T N+ G C+ ++ + ++ + +SL+S KCG D Y++F KM +
Sbjct: 473 LSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQK 532
Query: 61 NVVSWTAIIAAFAQEWEVD 79
+ VSW ++I + D
Sbjct: 533 DTVSWNSMIMGLSHHGLAD 551
Score = 97 (39.2 bits), Expect = 0.00073, P = 0.00073
Identities = 19/45 (42%), Positives = 32/45 (71%)
Query: 30 NVYVGSSLI-SFCGKCGENIDVYKMFEKMPVRNVVSWTAIIAAFA 73
NV +S++ +C + G+ + Y++F +MP RN+VSWTA+I+ FA
Sbjct: 230 NVVTWTSMVYGYC-RYGDVREAYRLFCEMPERNIVSWTAMISGFA 273
>TAIR|locus:2151501 [details] [associations]
symbol:AT5G46460 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 GO:GO:0005739 EMBL:CP002688
GenomeReviews:BA000015_GR EMBL:AB019223 Gene3D:1.25.40.10
PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041
HOGENOM:HOG000237570 IPI:IPI00533243 RefSeq:NP_199458.1
UniGene:At.29955 ProteinModelPortal:Q9FHF9 SMR:Q9FHF9
EnsemblPlants:AT5G46460.1 GeneID:834689 KEGG:ath:AT5G46460
GeneFarm:3435 TAIR:At5g46460 eggNOG:NOG266955 InParanoid:Q9FHF9
OMA:DEQKEEM PhylomeDB:Q9FHF9 ProtClustDB:CLSN2686182
Genevestigator:Q9FHF9 Uniprot:Q9FHF9
Length = 697
Score = 104 (41.7 bits), Expect = 0.00012, P = 0.00012
Identities = 21/52 (40%), Positives = 34/52 (65%)
Query: 28 VANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNVVSWTAIIAAFAQEWEVD 79
V +V +S+IS C +CG+ K+F++MP R+VVSWTA++ + +VD
Sbjct: 94 VRDVVSWNSMISGCVECGDMNTAVKLFDEMPERSVVSWTAMVNGCFRSGKVD 145
Score = 104 (41.7 bits), Expect = 0.00012, P = 0.00012
Identities = 21/71 (29%), Positives = 37/71 (52%)
Query: 3 VTSCGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNV 62
+T+C + G Q L ++ GF+ YV +SLI+F C D K+F++ V
Sbjct: 232 ITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQV 291
Query: 63 VSWTAIIAAFA 73
WTA+++ ++
Sbjct: 292 AVWTALLSGYS 302
Score = 96 (38.9 bits), Expect = 0.00084, P = 0.00084
Identities = 21/72 (29%), Positives = 37/72 (51%)
Query: 3 VTSCGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNV 62
+ SC + + G + +AV+ G + +VG+SL+ G D +F K+ +++
Sbjct: 333 LNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSI 392
Query: 63 VSWTAIIAAFAQ 74
VSW +II AQ
Sbjct: 393 VSWNSIIVGCAQ 404
>TAIR|locus:2027554 [details] [associations]
symbol:AT1G56690 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR004154
InterPro:IPR002885 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005739 PROSITE:PS51375 SUPFAM:SSF52954 Pfam:PF01535
TIGRFAMs:TIGR00756 EMBL:AC009323 Pfam:PF13041 HOGENOM:HOG000237570
IPI:IPI00523592 PIR:G96608 RefSeq:NP_176062.1 UniGene:At.66043
ProteinModelPortal:Q9FXB9 PaxDb:Q9FXB9 PRIDE:Q9FXB9
EnsemblPlants:AT1G56690.1 GeneID:842125 KEGG:ath:AT1G56690
GeneFarm:3461 TAIR:At1g56690 eggNOG:NOG302853 InParanoid:Q9FXB9
OMA:TNMIGGL PhylomeDB:Q9FXB9 ProtClustDB:CLSN2912806
Genevestigator:Q9FXB9 Uniprot:Q9FXB9
Length = 704
Score = 104 (41.7 bits), Expect = 0.00012, P = 0.00012
Identities = 20/68 (29%), Positives = 38/68 (55%)
Query: 6 CGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNVVSW 65
C + +++ G Q VR F +VYV S L++ KCGE + +F++ ++++ W
Sbjct: 341 CATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMW 400
Query: 66 TAIIAAFA 73
+II+ +A
Sbjct: 401 NSIISGYA 408
>TAIR|locus:2097365 [details] [associations]
symbol:AT3G49710 "AT3G49710" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 Gene3D:1.25.40.10
PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041
HOGENOM:HOG000237570 IPI:IPI00533707 PIR:T46037 RefSeq:NP_190540.1
UniGene:At.22445 UniGene:At.53859 ProteinModelPortal:Q9M2Y7
SMR:Q9M2Y7 EnsemblPlants:AT3G49710.1 GeneID:824133
KEGG:ath:AT3G49710 GeneFarm:3525 TAIR:At3g49710 eggNOG:NOG274207
InParanoid:Q9M2Y7 OMA:DDCSFVC PhylomeDB:Q9M2Y7
ProtClustDB:CLSN2684258 Genevestigator:Q9M2Y7 Uniprot:Q9M2Y7
Length = 721
Score = 104 (41.7 bits), Expect = 0.00012, P = 0.00012
Identities = 23/74 (31%), Positives = 41/74 (55%)
Query: 8 STRNIRGGTQYQCLAVRSGFVANVYVGSSLISF---CGKCGENIDVYKMFEKMPVRNVVS 64
S ++ GG Q+ +++GF N +VGS LI F CG C D K+F+++ ++V
Sbjct: 252 SLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVV 311
Query: 65 WTAIIAAFAQEWEV 78
W +I+ ++ E+
Sbjct: 312 WNTMISGYSMNEEL 325
>TAIR|locus:2125899 [details] [associations]
symbol:AT4G33170 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002687 GenomeReviews:CT486007_GR
EMBL:AL161583 Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535
TIGRFAMs:TIGR00756 EMBL:AL035525 Pfam:PF13041 HOGENOM:HOG000237570
IPI:IPI00529412 PIR:T05197 RefSeq:NP_195043.1 UniGene:At.65446
ProteinModelPortal:Q9SMZ2 SMR:Q9SMZ2 PRIDE:Q9SMZ2
EnsemblPlants:AT4G33170.1 GeneID:829454 KEGG:ath:AT4G33170
GeneFarm:3439 TAIR:At4g33170 eggNOG:NOG285302 InParanoid:Q9SMZ2
OMA:SGILDMY PhylomeDB:Q9SMZ2 ProtClustDB:CLSN2685477
Genevestigator:Q9SMZ2 Uniprot:Q9SMZ2
Length = 990
Score = 105 (42.0 bits), Expect = 0.00014, P = 0.00014
Identities = 21/78 (26%), Positives = 40/78 (51%)
Query: 5 SCGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNVVS 64
+CG I G Q A++SG+ +++V S ++ KCG+ F+ +PV + V+
Sbjct: 526 TCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVA 585
Query: 65 WTAIIAAFAQEWEVDMCY 82
WT +I+ + E + +
Sbjct: 586 WTTMISGCIENGEEERAF 603
Score = 104 (41.7 bits), Expect = 0.00018, P = 0.00018
Identities = 19/63 (30%), Positives = 34/63 (53%)
Query: 15 GTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNVVSWTAIIAAFAQ 74
G Q A++ + +VG+SL+ KCG D Y +F+++ + N+ +W A++ AQ
Sbjct: 637 GRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQ 696
Query: 75 EWE 77
E
Sbjct: 697 HGE 699
Score = 103 (41.3 bits), Expect = 0.00023, P = 0.00023
Identities = 20/43 (46%), Positives = 30/43 (69%)
Query: 35 SSLISFCGKCGENIDVYKMFEKMPVRNVVSWTAIIAAFAQEWE 77
++LIS KCG ++F+KMP R++VSW +I+AA+AQ E
Sbjct: 78 NNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSE 120
>TAIR|locus:2144143 [details] [associations]
symbol:AT5G06540 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR002885 EMBL:CP002688
GenomeReviews:BA000015_GR EMBL:AP002543 PROSITE:PS51375
Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF12854 HOGENOM:HOG000237569
IPI:IPI00525372 RefSeq:NP_196272.1 UniGene:At.65494
ProteinModelPortal:Q9FG16 SMR:Q9FG16 PRIDE:Q9FG16
EnsemblPlants:AT5G06540.1 GeneID:830542 KEGG:ath:AT5G06540
GeneFarm:3536 TAIR:At5g06540 eggNOG:NOG262142 InParanoid:Q9FG16
OMA:SIMINGY PhylomeDB:Q9FG16 ProtClustDB:CLSN2686880
ArrayExpress:Q9FG16 Genevestigator:Q9FG16 Uniprot:Q9FG16
Length = 622
Score = 102 (41.0 bits), Expect = 0.00017, P = 0.00017
Identities = 22/60 (36%), Positives = 34/60 (56%)
Query: 15 GTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNVVSWTAIIAAFAQ 74
G Q VR GF +VYV +SL+ CG ++F +M R+VVSWT+++A + +
Sbjct: 136 GEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCK 195
>TAIR|locus:2159602 [details] [associations]
symbol:AT5G08510 "AT5G08510" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:1.25.40.10 PROSITE:PS51375
Pfam:PF01535 TIGRFAMs:TIGR00756 EMBL:AB006697 Pfam:PF13041
HOGENOM:HOG000237569 EMBL:BT015162 EMBL:AK226649 IPI:IPI00536311
RefSeq:NP_196468.1 UniGene:At.24658 ProteinModelPortal:Q9FNN7
SMR:Q9FNN7 PRIDE:Q9FNN7 EnsemblPlants:AT5G08510.1 GeneID:830750
KEGG:ath:AT5G08510 GeneFarm:4218 TAIR:At5g08510 eggNOG:NOG254377
InParanoid:Q9FNN7 OMA:NLCSWNS PhylomeDB:Q9FNN7
ProtClustDB:CLSN2687299 Genevestigator:Q9FNN7 Uniprot:Q9FNN7
Length = 511
Score = 100 (40.3 bits), Expect = 0.00021, P = 0.00021
Identities = 26/81 (32%), Positives = 43/81 (53%)
Query: 5 SCGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYK-MFEKMP-VRNV 62
+C + + G + + A +GF N+YV ++ I KCG IDV K +FE++ RN+
Sbjct: 224 ACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGM-IDVAKRLFEELGNQRNL 282
Query: 63 VSWTAIIAAFAQEWEVDMCYT 83
SW ++I + A + D T
Sbjct: 283 CSWNSMIGSLATHGKHDEALT 303
>TAIR|locus:2102852 [details] [associations]
symbol:CRR2 "AT3G46790" species:3702 "Arabidopsis
thaliana" [GO:0009507 "chloroplast" evidence=ISS] [GO:0031425
"chloroplast RNA processing" evidence=IMP] [GO:0031426
"polycistronic mRNA processing" evidence=IMP] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=RCA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=RCA] [GO:0030422 "production
of siRNA involved in RNA interference" evidence=RCA] [GO:0035196
"production of miRNAs involved in gene silencing by miRNA"
evidence=RCA] [GO:0043687 "post-translational protein modification"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] InterPro:IPR011990 InterPro:IPR002885
GO:GO:0009507 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535 Pfam:PF13812
TIGRFAMs:TIGR00756 EMBL:AL096859 GO:GO:0031425 Pfam:PF13041
HOGENOM:HOG000237570 EMBL:AK226825 IPI:IPI00546099 PIR:T12969
RefSeq:NP_190263.1 UniGene:At.3629 ProteinModelPortal:Q9STF3
SMR:Q9STF3 STRING:Q9STF3 PRIDE:Q9STF3 EnsemblPlants:AT3G46790.1
GeneID:823832 KEGG:ath:AT3G46790 GeneFarm:3440 TAIR:At3g46790
eggNOG:NOG277232 InParanoid:Q9STF3 OMA:WSAMIAC PhylomeDB:Q9STF3
ProtClustDB:CLSN2685130 Genevestigator:Q9STF3 GO:GO:0031426
Uniprot:Q9STF3
Length = 657
Score = 101 (40.6 bits), Expect = 0.00023, P = 0.00023
Identities = 23/72 (31%), Positives = 42/72 (58%)
Query: 4 TSCGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYK-MFEKMPVRNV 62
+ C + ++ G + R G+ ++VY+ ++L+ + G +D +F MPVRNV
Sbjct: 191 SEC-TVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFG-CVDYASYVFGGMPVRNV 248
Query: 63 VSWTAIIAAFAQ 74
VSW+A+IA +A+
Sbjct: 249 VSWSAMIACYAK 260
>TAIR|locus:2154389 [details] [associations]
symbol:LPA66 "LOW PSII ACCUMULATION 66" species:3702
"Arabidopsis thaliana" [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0009451 "RNA modification" evidence=IMP] [GO:0007020
"microtubule nucleation" evidence=RCA] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0009507 Gene3D:1.25.40.10 PROSITE:PS51375 EMBL:AB017061
Pfam:PF01535 Pfam:PF13812 TIGRFAMs:TIGR00756 GO:GO:0009451
Pfam:PF13041 HOGENOM:HOG000237569 EMBL:AY056318 IPI:IPI00541515
RefSeq:NP_199702.1 UniGene:At.26336 ProteinModelPortal:Q9FI80
SMR:Q9FI80 PaxDb:Q9FI80 PRIDE:Q9FI80 EnsemblPlants:AT5G48910.1
GeneID:834949 KEGG:ath:AT5G48910 GeneFarm:3360 TAIR:At5g48910
eggNOG:NOG255755 InParanoid:Q9FI80 OMA:LELWREM PhylomeDB:Q9FI80
ProtClustDB:CLSN2686787 Genevestigator:Q9FI80 Uniprot:Q9FI80
Length = 646
Score = 68 (29.0 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 17/52 (32%), Positives = 26/52 (50%)
Query: 5 SCGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEK 56
+C T I+ G Q LA++ GF + +V S+L+ CG D +F K
Sbjct: 137 ACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYK 188
Score = 55 (24.4 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 9/21 (42%), Positives = 16/21 (76%)
Query: 53 MFEKMPVRNVVSWTAIIAAFA 73
+F+KM R+VVSW +I+ ++
Sbjct: 230 LFDKMRQRSVVSWNTMISGYS 250
>TAIR|locus:2077878 [details] [associations]
symbol:AT3G08820 "AT3G08820" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002686
GenomeReviews:BA000014_GR Gene3D:1.25.40.10 EMBL:AC012562
PROSITE:PS51375 EMBL:AC010871 Pfam:PF01535 TIGRFAMs:TIGR00756
Pfam:PF13041 HOGENOM:HOG000237569 IPI:IPI00518512
RefSeq:NP_187494.1 UniGene:At.65071 ProteinModelPortal:Q9SR82
SMR:Q9SR82 PaxDb:Q9SR82 PRIDE:Q9SR82 EnsemblPlants:AT3G08820.1
GeneID:820029 KEGG:ath:AT3G08820 GeneFarm:3532 TAIR:At3g08820
eggNOG:NOG303126 InParanoid:Q9SR82 OMA:LIALEPW PhylomeDB:Q9SR82
ProtClustDB:CLSN2684962 Genevestigator:Q9SR82 Uniprot:Q9SR82
Length = 685
Score = 101 (40.6 bits), Expect = 0.00024, P = 0.00024
Identities = 21/68 (30%), Positives = 38/68 (55%)
Query: 5 SCGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNVVS 64
+C + + G L V+ GF +V +SL+S G D +K+F+++P R+VV+
Sbjct: 120 ACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVT 179
Query: 65 WTAIIAAF 72
WTA+ + +
Sbjct: 180 WTALFSGY 187
>TAIR|locus:2012517 [details] [associations]
symbol:AT1G14470 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:1.25.40.10 PROSITE:PS51375 EMBL:AC012188 Pfam:PF01535
TIGRFAMs:TIGR00756 Pfam:PF12854 Pfam:PF13041 HOGENOM:HOG000237570
IPI:IPI00529823 PIR:E86279 RefSeq:NP_172899.1 UniGene:At.51608
ProteinModelPortal:Q9M9R6 SMR:Q9M9R6 EnsemblPlants:AT1G14470.1
GeneID:838009 KEGG:ath:AT1G14470 GeneFarm:4286 TAIR:At1g14470
eggNOG:NOG297619 InParanoid:Q9M9R6 OMA:KHESVES PhylomeDB:Q9M9R6
ProtClustDB:CLSN2682948 Genevestigator:Q9M9R6 Uniprot:Q9M9R6
Length = 540
Score = 70 (29.7 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 11/23 (47%), Positives = 19/23 (82%)
Query: 52 KMFEKMPVRNVVSWTAIIAAFAQ 74
K F++MP ++VVSW A+++ +AQ
Sbjct: 219 KYFDRMPEKSVVSWNAMLSGYAQ 241
Score = 51 (23.0 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 16/54 (29%), Positives = 27/54 (50%)
Query: 3 VTSCGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEK 56
+ SC TR +R + Y L S NV+V +S+ + K DV +++E+
Sbjct: 45 IISC-CTR-LRAPSYYTRLIFDSVTFPNVFVVNSMFKYFSKMDMANDVLRLYEQ 96
>TAIR|locus:2076456 [details] [associations]
symbol:AT3G58590 "AT3G58590" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002686
GenomeReviews:BA000014_GR Gene3D:1.25.40.10 PROSITE:PS51375
Pfam:PF01535 TIGRFAMs:TIGR00756 EMBL:AL137082 Pfam:PF13041
EMBL:AK229655 IPI:IPI00544751 PIR:T45679 RefSeq:NP_191418.2
UniGene:At.43654 UniGene:At.48781 ProteinModelPortal:Q0WN01
SMR:Q0WN01 PRIDE:Q0WN01 EnsemblPlants:AT3G58590.1 GeneID:825028
KEGG:ath:AT3G58590 TAIR:At3g58590 eggNOG:NOG289005
HOGENOM:HOG000238280 InParanoid:Q9M2F7 OMA:LITWTAL PhylomeDB:Q0WN01
ProtClustDB:CLSN2680448 Genevestigator:Q0WN01 Uniprot:Q0WN01
Length = 741
Score = 101 (40.6 bits), Expect = 0.00026, P = 0.00026
Identities = 23/58 (39%), Positives = 31/58 (53%)
Query: 17 QYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNVVSWTAIIAAFAQ 74
Q C A + G + V +SLIS GKCG +MF+ ++VSW AII A A+
Sbjct: 236 QLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAK 293
Score = 97 (39.2 bits), Expect = 0.00071, P = 0.00071
Identities = 21/66 (31%), Positives = 37/66 (56%)
Query: 6 CGSTRNIRGGTQYQCLAVRSGF-VANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNVVS 64
C ++ G+ L ++ F A+ +V + LI GKCG V K+FE+ +N+++
Sbjct: 555 CSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEETREKNLIT 614
Query: 65 WTAIIA 70
WTA+I+
Sbjct: 615 WTALIS 620
>TAIR|locus:2122634 [details] [associations]
symbol:OTP70 "AT4G25270" species:3702 "Arabidopsis
thaliana" [GO:0008380 "RNA splicing" evidence=IMP] [GO:0009451 "RNA
modification" evidence=IMP] InterPro:IPR011990 InterPro:IPR002885
GO:GO:0009507 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0008380
EMBL:AL161563 Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535
TIGRFAMs:TIGR00756 EMBL:AL035396 Pfam:PF13041 IPI:IPI00521833
PIR:T05548 RefSeq:NP_194257.1 UniGene:At.32276
ProteinModelPortal:Q9SB36 SMR:Q9SB36 EnsemblPlants:AT4G25270.1
GeneID:828630 KEGG:ath:AT4G25270 GeneFarm:4021 TAIR:At4g25270
eggNOG:NOG269307 HOGENOM:HOG000006216 InParanoid:Q9SB36 OMA:EHNFELL
PhylomeDB:Q9SB36 ProtClustDB:CLSN2685667 Genevestigator:Q9SB36
Uniprot:Q9SB36
Length = 527
Score = 99 (39.9 bits), Expect = 0.00028, P = 0.00028
Identities = 18/68 (26%), Positives = 38/68 (55%)
Query: 5 SCGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNVVS 64
+CG +++ G V+ GF +VYV ++L+ KCG+ + +F+ +P ++ VS
Sbjct: 204 ACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVS 263
Query: 65 WTAIIAAF 72
W +++ +
Sbjct: 264 WNSMLTGY 271
>TAIR|locus:2195980 [details] [associations]
symbol:AT1G77170 "AT1G77170" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002684
GenomeReviews:CT485782_GR EMBL:AC004260 Gene3D:1.25.40.10
PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041
HOGENOM:HOG000237569 IPI:IPI00518933 RefSeq:NP_177842.1
UniGene:At.21362 ProteinModelPortal:Q3ECB8 PaxDb:Q3ECB8
EnsemblPlants:AT1G77170.1 GeneID:844054 KEGG:ath:AT1G77170
GeneFarm:3631 TAIR:At1g77170 eggNOG:NOG311468 InParanoid:Q3ECB8
OMA:LEPWNDG PhylomeDB:Q3ECB8 ProtClustDB:CLSN2682973
Genevestigator:Q3ECB8 Uniprot:Q3ECB8
Length = 467
Score = 98 (39.6 bits), Expect = 0.00030, P = 0.00030
Identities = 24/71 (33%), Positives = 41/71 (57%)
Query: 5 SCGSTRNIRGGTQ-YQC-LAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNV 62
SCG ++ Q ++C L ++ +++ + +SLI GKCG +FE+M RNV
Sbjct: 227 SCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNV 286
Query: 63 VSWTAIIAAFA 73
VSW+++I +A
Sbjct: 287 VSWSSMIVGYA 297
>TAIR|locus:2159582 [details] [associations]
symbol:SLG1 "AT5G08490" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM;IDA] [GO:0009414 "response to water
deprivation" evidence=IMP] [GO:0009737 "response to abscisic acid
stimulus" evidence=IMP] [GO:0080156 "mitochondrial mRNA
modification" evidence=IMP] InterPro:IPR011990 InterPro:IPR002885
GO:GO:0005739 GO:GO:0009737 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0009414 Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535
TIGRFAMs:TIGR00756 EMBL:AB006697 Pfam:PF13041 GO:GO:0080156
IPI:IPI00536602 RefSeq:NP_196466.1 UniGene:At.65496
ProteinModelPortal:Q9FNN9 SMR:Q9FNN9 EnsemblPlants:AT5G08490.1
GeneID:830748 KEGG:ath:AT5G08490 GeneFarm:4217 TAIR:At5g08490
eggNOG:NOG273377 HOGENOM:HOG000083164 InParanoid:Q9FNN9 OMA:PAGCSWI
PhylomeDB:Q9FNN9 ProtClustDB:CLSN2687297 Genevestigator:Q9FNN9
Uniprot:Q9FNN9
Length = 849
Score = 101 (40.6 bits), Expect = 0.00031, P = 0.00031
Identities = 22/74 (29%), Positives = 39/74 (52%)
Query: 1 MPVTSCGSTRNIRGGTQYQCLAVRSGFVA-NVYVGSSLISFCGKCGENIDVYKMFEKMPV 59
+PV C ++ G + +R ++ + VG++LISF + G+ Y F M
Sbjct: 337 LPV--CAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMST 394
Query: 60 RNVVSWTAIIAAFA 73
++++SW AI+ AFA
Sbjct: 395 KDIISWNAILDAFA 408
Score = 100 (40.3 bits), Expect = 0.00040, P = 0.00040
Identities = 29/82 (35%), Positives = 44/82 (53%)
Query: 1 MPVTSCGST-RNI--RGGTQYQCLAV-RSGFVANVYVGSSLISFCGKCGENIDVYKMFEK 56
+PV C S +NI R G Q V RS +V+V +SL+SF + G + +F +
Sbjct: 231 LPV--CASMDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTR 288
Query: 57 MPVRNVVSWTAIIAAFAQ--EW 76
M +++VSW +IA +A EW
Sbjct: 289 MGSKDLVSWNVVIAGYASNCEW 310
>TAIR|locus:2095487 [details] [associations]
symbol:AT3G28660 "AT3G28660" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR002885 EMBL:CP002686
GenomeReviews:BA000014_GR PROSITE:PS51375 Pfam:PF01535
TIGRFAMs:TIGR00756 Pfam:PF12854 Pfam:PF13041 HOGENOM:HOG000237569
EMBL:AP000420 EMBL:AY091065 EMBL:BT000982 IPI:IPI00548848
RefSeq:NP_189507.2 UniGene:At.42756 ProteinModelPortal:Q9LJI9
SMR:Q9LJI9 EnsemblPlants:AT3G28660.1 GeneID:822496
KEGG:ath:AT3G28660 GeneFarm:3695 TAIR:At3g28660 eggNOG:NOG252175
InParanoid:Q9LJI9 PhylomeDB:Q9LJI9 ProtClustDB:CLSN2685236
Genevestigator:Q9LJI9 Uniprot:Q9LJI9
Length = 504
Score = 98 (39.6 bits), Expect = 0.00034, P = 0.00034
Identities = 21/72 (29%), Positives = 38/72 (52%)
Query: 3 VTSCGSTRNIRGGTQYQCLAVRSGFV-ANVYVGSSLISFCGKCGENIDVYKMFEKMPVRN 61
+T+C + G + ++ ++V+VG++L+ KCG ++FEK+ RN
Sbjct: 225 LTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRN 284
Query: 62 VVSWTAIIAAFA 73
V SW A+I +A
Sbjct: 285 VFSWAALIGGYA 296
>TAIR|locus:2012858 [details] [associations]
symbol:AT1G10330 "AT1G10330" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002684
GenomeReviews:CT485782_GR Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AC005489 Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041
HOGENOM:HOG000237569 IPI:IPI00522935 PIR:D86237 RefSeq:NP_172504.1
UniGene:At.51552 ProteinModelPortal:Q9SY75 SMR:Q9SY75 PRIDE:Q9SY75
EnsemblPlants:AT1G10330.1 GeneID:837572 KEGG:ath:AT1G10330
GeneFarm:3635 TAIR:At1g10330 eggNOG:NOG261194 InParanoid:Q9SY75
OMA:CTWNALL PhylomeDB:Q9SY75 ProtClustDB:CLSN2679569
Genevestigator:Q9SY75 Uniprot:Q9SY75
Length = 467
Score = 97 (39.2 bits), Expect = 0.00039, P = 0.00039
Identities = 17/41 (41%), Positives = 29/41 (70%)
Query: 35 SSLISFCGKCGENIDVYKMFEKMPVRNVVSWTAIIAAFAQE 75
+SL+ CG+ GE ++ F++MPV +VVSWT +I F+++
Sbjct: 156 NSLLDACGRNGEMDYAFEYFQRMPVTDVVSWTTVINGFSKK 196
>TAIR|locus:2168963 [details] [associations]
symbol:AT5G47460 "AT5G47460" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR002885 EMBL:CP002688
GenomeReviews:BA000015_GR EMBL:AB025628 PROSITE:PS51375
Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041 IPI:IPI00516266
RefSeq:NP_199557.1 UniGene:At.29890 UniGene:At.66689
ProteinModelPortal:Q9FGL1 SMR:Q9FGL1 PaxDb:Q9FGL1 PRIDE:Q9FGL1
EnsemblPlants:AT5G47460.1 GeneID:834796 KEGG:ath:AT5G47460
GeneFarm:4043 TAIR:At5g47460 eggNOG:NOG299819 HOGENOM:HOG000115646
InParanoid:Q9FGL1 OMA:PNSSSWN PhylomeDB:Q9FGL1
ProtClustDB:CLSN2686376 Genevestigator:Q9FGL1 Uniprot:Q9FGL1
Length = 576
Score = 98 (39.6 bits), Expect = 0.00040, P = 0.00040
Identities = 19/51 (37%), Positives = 32/51 (62%)
Query: 30 NVYVGSSLISFCGKCGENIDVYKMFEKMPVRNVVSWTAIIAAFAQEWEVDM 80
NV VG+ LI GKCG D +F+ M ++ VSW AI+A+ ++ ++++
Sbjct: 191 NVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLEL 241
Score = 95 (38.5 bits), Expect = 0.00085, P = 0.00085
Identities = 17/52 (32%), Positives = 36/52 (69%)
Query: 24 RSGFVANVYVGSSLISFCGKCGENI-DVYKMFEKMPVRNVVSWTAIIAAFAQ 74
+ GFV+N + +SL+ F K +++ D +K+F++MP +V+SW ++++ + Q
Sbjct: 83 KHGFVSNTRLSNSLMRFY-KTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQ 133
>TAIR|locus:2155740 [details] [associations]
symbol:AT5G65570 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002688 GenomeReviews:BA000015_GR
Gene3D:1.25.40.10 PROSITE:PS51375 EMBL:AB026639 Pfam:PF01535
TIGRFAMs:TIGR00756 Pfam:PF13041 HOGENOM:HOG000237570
IPI:IPI00535497 RefSeq:NP_201360.1 UniGene:At.55704
ProteinModelPortal:Q9LSL8 SMR:Q9LSL8 PRIDE:Q9LSL8
EnsemblPlants:AT5G65570.1 GeneID:836683 KEGG:ath:AT5G65570
GeneFarm:3433 TAIR:At5g65570 eggNOG:NOG284207 InParanoid:Q9LSL8
OMA:KKNPAMS PhylomeDB:Q9LSL8 ProtClustDB:CLSN2686627
Genevestigator:Q9LSL8 Uniprot:Q9LSL8
Length = 738
Score = 99 (39.9 bits), Expect = 0.00043, P = 0.00043
Identities = 23/76 (30%), Positives = 41/76 (53%)
Query: 5 SCGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNVVS 64
SCG+ ++I G L V+SGF + + +SL++ +C D ++F+ + N VS
Sbjct: 276 SCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVS 335
Query: 65 WTAIIAAFAQEWEVDM 80
WT++I+ Q +M
Sbjct: 336 WTSLISGLVQNGREEM 351
>TAIR|locus:2027589 [details] [associations]
symbol:PGN "AT1G56570" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM;IDA] [GO:0009651 "response to salt
stress" evidence=IMP] [GO:0009737 "response to abscisic acid
stimulus" evidence=IMP] [GO:0009749 "response to glucose stimulus"
evidence=IMP] [GO:0050832 "defense response to fungus"
evidence=IMP] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005739 GO:GO:0009737 GO:GO:0050832
GO:GO:0009651 GO:GO:0009749 Gene3D:1.25.40.10 PROSITE:PS51375
Pfam:PF01535 TIGRFAMs:TIGR00756 EMBL:AC009323 Pfam:PF13041
HOGENOM:HOG000237570 IPI:IPI00545852 PIR:D96607 RefSeq:NP_176050.1
UniGene:At.52235 ProteinModelPortal:Q9FXA9 SMR:Q9FXA9
EnsemblPlants:AT1G56570.1 GeneID:842111 KEGG:ath:AT1G56570
GeneFarm:3622 TAIR:At1g56570 eggNOG:NOG305919 InParanoid:Q9FXA9
OMA:LMDMYAT PhylomeDB:Q9FXA9 ProtClustDB:CLSN2682898
Genevestigator:Q9FXA9 Uniprot:Q9FXA9
Length = 611
Score = 98 (39.6 bits), Expect = 0.00044, P = 0.00044
Identities = 23/71 (32%), Positives = 37/71 (52%)
Query: 3 VTSCGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMF-EKMPVRN 61
V +C + + G Q R GF NV + ++LI KCG D ++F E + RN
Sbjct: 320 VAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRN 379
Query: 62 VVSWTAIIAAF 72
+VSWT+++ +
Sbjct: 380 LVSWTSMMIGY 390
>TAIR|locus:2161018 [details] [associations]
symbol:AT5G56310 "AT5G56310" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:1.25.40.10 EMBL:AB009049
PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041
HOGENOM:HOG000237569 EMBL:AK229016 IPI:IPI00527231
RefSeq:NP_200442.1 UniGene:At.70454 ProteinModelPortal:Q9FMA1
SMR:Q9FMA1 PRIDE:Q9FMA1 EnsemblPlants:AT5G56310.1 GeneID:835730
KEGG:ath:AT5G56310 GeneFarm:4045 TAIR:At5g56310 eggNOG:NOG310822
InParanoid:Q9FMA1 OMA:KANAAIW PhylomeDB:Q9FMA1
ProtClustDB:CLSN2687172 Genevestigator:Q9FMA1 Uniprot:Q9FMA1
Length = 530
Score = 97 (39.2 bits), Expect = 0.00046, P = 0.00046
Identities = 23/65 (35%), Positives = 36/65 (55%)
Query: 15 GTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNVVSWTAIIAAFAQ 74
G Q V GF ++V+V + LI CG D KMF++M V++V W A++A + +
Sbjct: 135 GRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGK 194
Query: 75 EWEVD 79
E+D
Sbjct: 195 VGEMD 199
>TAIR|locus:2098670 [details] [associations]
symbol:AT3G50420 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535 TIGRFAMs:TIGR00756
UniGene:At.20758 EMBL:AL133363 Pfam:PF13041 IPI:IPI00521058
PIR:T46073 RefSeq:NP_190611.1 UniGene:At.53874
ProteinModelPortal:Q9SCT2 SMR:Q9SCT2 PRIDE:Q9SCT2
EnsemblPlants:AT3G50420.1 GeneID:824206 KEGG:ath:AT3G50420
GeneFarm:4236 TAIR:At3g50420 eggNOG:NOG286613 HOGENOM:HOG000241114
InParanoid:Q9SCT2 OMA:PDLKCWN PhylomeDB:Q9SCT2
ProtClustDB:CLSN2684412 Genevestigator:Q9SCT2 Uniprot:Q9SCT2
Length = 794
Score = 99 (39.9 bits), Expect = 0.00047, P = 0.00047
Identities = 24/72 (33%), Positives = 40/72 (55%)
Query: 6 CGSTRNIRGGTQYQCLAVRSGFVA---NVYVGSSLISFCGKCGENIDVYKMFEKMPVRNV 62
C S ++ Q L + +G A + Y ++LIS +CG K+F+KMP RNV
Sbjct: 104 CVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMYVRCGSLEQARKVFDKMPHRNV 163
Query: 63 VSWTAIIAAFAQ 74
VS+ A+ +A+++
Sbjct: 164 VSYNALYSAYSR 175
>TAIR|locus:2079187 [details] [associations]
symbol:AT3G47530 "AT3G47530" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR002885 EMBL:CP002686
GenomeReviews:BA000014_GR PROSITE:PS51375 EMBL:AL132955
Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041 HOGENOM:HOG000237569
EMBL:AK221462 IPI:IPI00528158 PIR:T45713 RefSeq:NP_190337.1
UniGene:At.49647 ProteinModelPortal:Q9SN85 SMR:Q9SN85 PaxDb:Q9SN85
PRIDE:Q9SN85 EnsemblPlants:AT3G47530.1 GeneID:823907
KEGG:ath:AT3G47530 GeneFarm:3522 TAIR:At3g47530 eggNOG:NOG247657
InParanoid:Q9SN85 OMA:DSTIWRT PhylomeDB:Q9SN85
ProtClustDB:CLSN2685176 Genevestigator:Q9SN85 Uniprot:Q9SN85
Length = 591
Score = 97 (39.2 bits), Expect = 0.00053, P = 0.00053
Identities = 21/73 (28%), Positives = 37/73 (50%)
Query: 1 MPVTSCGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVR 60
+ + +C + + G Q +G + + ++L+S +CG Y++F M R
Sbjct: 222 LALQACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRER 281
Query: 61 NVVSWTAIIAAFA 73
NVVSWTA+I+ A
Sbjct: 282 NVVSWTALISGLA 294
>TAIR|locus:2056740 [details] [associations]
symbol:OTP85 "ORGANELLE TRANSCRIPT PROCESSING 85"
species:3702 "Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM] [GO:0009507 "chloroplast" evidence=IDA] [GO:0031425
"chloroplast RNA processing" evidence=IMP] [GO:0016556 "mRNA
modification" evidence=RCA] InterPro:IPR011990 EMBL:AC004138
InterPro:IPR002885 GO:GO:0009507 EMBL:CP002685
GenomeReviews:CT485783_GR Gene3D:1.25.40.10 PROSITE:PS51375
Pfam:PF01535 TIGRFAMs:TIGR00756 GO:GO:0031425 HOGENOM:HOG000237569
EMBL:AF517844 IPI:IPI00532421 PIR:H84442 RefSeq:NP_178398.1
UniGene:At.41442 ProteinModelPortal:Q8LK93 SMR:Q8LK93 PaxDb:Q8LK93
PRIDE:Q8LK93 EnsemblPlants:AT2G02980.1 GeneID:814827
KEGG:ath:AT2G02980 GeneFarm:3321 TAIR:At2g02980 eggNOG:NOG294028
InParanoid:O80613 OMA:PTLINMY PhylomeDB:Q8LK93
ProtClustDB:CLSN2683708 Genevestigator:Q8LK93 Uniprot:Q8LK93
Length = 603
Score = 97 (39.2 bits), Expect = 0.00055, P = 0.00055
Identities = 22/77 (28%), Positives = 38/77 (49%)
Query: 3 VTSCGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNV 62
++SC ++ G A + F V V ++LI KCG D +FEKM ++
Sbjct: 237 LSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDT 296
Query: 63 VSWTAIIAAFAQEWEVD 79
+W+A+I A+A + +
Sbjct: 297 QAWSAMIVAYANHGKAE 313
>TAIR|locus:1009023396 [details] [associations]
symbol:AT5G40405 "AT5G40405" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:1.25.40.10 PROSITE:PS51375
Pfam:PF01535 TIGRFAMs:TIGR00756 EMBL:AB006702 Pfam:PF13041
HOGENOM:HOG000237569 IPI:IPI00656840 RefSeq:NP_001031987.1
UniGene:At.63338 ProteinModelPortal:Q9FND7 PaxDb:Q9FND7
EnsemblPlants:AT5G40405.1 GeneID:3771385 KEGG:ath:AT5G40405
GeneFarm:3177 TAIR:At5g40405 eggNOG:NOG250628 OMA:LETANHG
PhylomeDB:Q9FND7 ProtClustDB:CLSN2918762 Genevestigator:Q9FND7
Uniprot:Q9FND7
Length = 612
Score = 97 (39.2 bits), Expect = 0.00056, P = 0.00056
Identities = 15/43 (34%), Positives = 30/43 (69%)
Query: 35 SSLISFCGKCGENIDVYKMFEKMPVRNVVSWTAIIAAFAQEWE 77
+++++ C +CG+ + K+FE MP R+ ++W A+I+ +AQ E
Sbjct: 178 TAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGE 220
>TAIR|locus:2183886 [details] [associations]
symbol:RARE1 "REQUIRED FOR ACCD RNA EDITING 1"
species:3702 "Arabidopsis thaliana" [GO:0009507 "chloroplast"
evidence=ISM] [GO:0009451 "RNA modification" evidence=IMP]
[GO:0016556 "mRNA modification" evidence=RCA] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0009507 Gene3D:1.25.40.10 PROSITE:PS51375 EMBL:AL163491
Pfam:PF01535 TIGRFAMs:TIGR00756 GO:GO:0009451 Pfam:PF13041
HOGENOM:HOG000237570 IPI:IPI00546730 PIR:T48574 RefSeq:NP_196831.1
UniGene:At.65509 ProteinModelPortal:Q9LYU9 SMR:Q9LYU9 PaxDb:Q9LYU9
PRIDE:Q9LYU9 EnsemblPlants:AT5G13270.1 GeneID:831168
KEGG:ath:AT5G13270 GeneFarm:3538 TAIR:At5g13270 eggNOG:NOG273627
InParanoid:Q9LYU9 OMA:PDAMSWK PhylomeDB:Q9LYU9
ProtClustDB:CLSN2687008 Genevestigator:Q9LYU9 Uniprot:Q9LYU9
Length = 752
Score = 98 (39.6 bits), Expect = 0.00056, P = 0.00056
Identities = 21/70 (30%), Positives = 34/70 (48%)
Query: 5 SCGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNVVS 64
+C S + G Q + G + V VG+ L+ F KC + F+++ N VS
Sbjct: 294 ACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVS 353
Query: 65 WTAIIAAFAQ 74
W+AII+ + Q
Sbjct: 354 WSAIISGYCQ 363
>TAIR|locus:2183931 [details] [associations]
symbol:AT5G13230 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 GO:GO:0005739 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:1.25.40.10 PROSITE:PS51375
EMBL:AL163491 Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041
HOGENOM:HOG000237570 IPI:IPI00546460 PIR:T48570 RefSeq:NP_196827.1
UniGene:At.54832 ProteinModelPortal:Q9LYV3 SMR:Q9LYV3 PaxDb:Q9LYV3
PRIDE:Q9LYV3 EnsemblPlants:AT5G13230.1 GeneID:831163
KEGG:ath:AT5G13230 GeneFarm:3537 TAIR:At5g13230 eggNOG:NOG313696
InParanoid:Q9LYV3 OMA:INGMLEW PhylomeDB:Q9LYV3
ProtClustDB:CLSN2687006 Genevestigator:Q9LYV3 Uniprot:Q9LYV3
Length = 822
Score = 98 (39.6 bits), Expect = 0.00063, P = 0.00063
Identities = 21/59 (35%), Positives = 33/59 (55%)
Query: 15 GTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDV-YKMFEKMPVRNVVSWTAIIAAF 72
G Q L V+ GF ++YV ++LI KC E +D K+F ++ +N VSW +I +
Sbjct: 367 GEQLHGLVVKVGFDLDIYVSNALIDVYAKC-EKMDTAVKLFAELSSKNEVSWNTVIVGY 424
Score = 98 (39.6 bits), Expect = 0.00063, P = 0.00063
Identities = 21/69 (30%), Positives = 36/69 (52%)
Query: 5 SCGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNVVS 64
+C S ++ G Q LA+++ V V +SLI KCG+ +F +M +V S
Sbjct: 458 ACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVAS 517
Query: 65 WTAIIAAFA 73
W A+I+ ++
Sbjct: 518 WNALISGYS 526
>TAIR|locus:2088827 [details] [associations]
symbol:AT3G26540 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR002885 EMBL:CP002686
GenomeReviews:BA000014_GR PROSITE:PS51375 Pfam:PF01535
TIGRFAMs:TIGR00756 EMBL:AB028611 Pfam:PF13041 IPI:IPI00519926
RefSeq:NP_189286.1 UniGene:At.65162 ProteinModelPortal:Q9LRV2
SMR:Q9LRV2 PRIDE:Q9LRV2 EnsemblPlants:AT3G26540.1 GeneID:822262
KEGG:ath:AT3G26540 GeneFarm:4287 TAIR:At3g26540 eggNOG:NOG262114
HOGENOM:HOG000083802 InParanoid:Q9LRV2 OMA:ECMIELL PhylomeDB:Q9LRV2
ProtClustDB:CLSN2684861 Genevestigator:Q9LRV2 Uniprot:Q9LRV2
Length = 700
Score = 97 (39.2 bits), Expect = 0.00066, P = 0.00066
Identities = 20/70 (28%), Positives = 37/70 (52%)
Query: 5 SCGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNVVS 64
SCG ++R Q C V+ G+ NV + +S++ GKC D ++F+++ + VS
Sbjct: 171 SCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVS 230
Query: 65 WTAIIAAFAQ 74
W I+ + +
Sbjct: 231 WNVIVRRYLE 240
>TAIR|locus:2140235 [details] [associations]
symbol:AT4G02750 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002687 GenomeReviews:CT486007_GR
EMBL:AL161495 Gene3D:1.25.40.10 PROSITE:PS51375 Pfam:PF01535
Pfam:PF13812 TIGRFAMs:TIGR00756 EMBL:AC004044 Pfam:PF12854
Pfam:PF13041 HOGENOM:HOG000237570 IPI:IPI00548792 PIR:A85035
RefSeq:NP_192184.1 UniGene:At.50610 ProteinModelPortal:Q9SY02
SMR:Q9SY02 PRIDE:Q9SY02 EnsemblPlants:AT4G02750.1 GeneID:828187
KEGG:ath:AT4G02750 GeneFarm:3233 TAIR:At4g02750 eggNOG:NOG280862
InParanoid:Q9SY02 OMA:MYVLLSN PhylomeDB:Q9SY02
ProtClustDB:CLSN2685776 Genevestigator:Q9SY02 Uniprot:Q9SY02
Length = 781
Score = 97 (39.2 bits), Expect = 0.00076, P = 0.00076
Identities = 18/72 (25%), Positives = 39/72 (54%)
Query: 3 VTSCGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNV 62
+++C + G Q V+ G+ +VG++L+ KCG + +F++M +++
Sbjct: 416 LSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDI 475
Query: 63 VSWTAIIAAFAQ 74
VSW +IA +++
Sbjct: 476 VSWNTMIAGYSR 487
>TAIR|locus:2080898 [details] [associations]
symbol:AT3G51320 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR002885 EMBL:CP002686
GenomeReviews:BA000014_GR PROSITE:PS51375 EMBL:AL132980
Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041 EMBL:AK226647
IPI:IPI00519672 PIR:T45763 RefSeq:NP_190700.2 UniGene:At.53887
ProteinModelPortal:Q0WVU0 SMR:Q0WVU0 EnsemblPlants:AT3G51320.1
GeneID:824295 KEGG:ath:AT3G51320 TAIR:At3g51320 eggNOG:NOG292346
HOGENOM:HOG000115632 InParanoid:Q0WVU0 OMA:WCMANLY PhylomeDB:Q0WVU0
ProtClustDB:CLSN2699179 Genevestigator:Q0WVU0 Uniprot:Q0WVU0
Length = 530
Score = 95 (38.5 bits), Expect = 0.00076, P = 0.00076
Identities = 18/69 (26%), Positives = 37/69 (53%)
Query: 3 VTSCGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNV 62
+ +CG + ++ G +R+ ++V + ++LI GKC E ++F+ + +RN
Sbjct: 257 LNACGRSARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNK 316
Query: 63 VSWTAIIAA 71
V+W +I A
Sbjct: 317 VTWNVMILA 325
>TAIR|locus:2007116 [details] [associations]
symbol:AT1G69350 "AT1G69350" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR002885 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005739 Gene3D:1.25.40.10
PROSITE:PS51375 EMBL:AC018364 EMBL:AC073178 Pfam:PF01535
Pfam:PF13812 TIGRFAMs:TIGR00756 Pfam:PF13041 IPI:IPI00543418
RefSeq:NP_564961.1 UniGene:At.52447 ProteinModelPortal:Q9C507
SMR:Q9C507 PaxDb:Q9C507 PRIDE:Q9C507 EnsemblPlants:AT1G69350.1
GeneID:843267 KEGG:ath:AT1G69350 GeneFarm:3625 TAIR:At1g69350
eggNOG:NOG266087 HOGENOM:HOG000115616 InParanoid:Q9C507 OMA:SSEHFAC
PhylomeDB:Q9C507 Genevestigator:Q9C507 Uniprot:Q9C507
Length = 787
Score = 97 (39.2 bits), Expect = 0.00076, P = 0.00076
Identities = 20/75 (26%), Positives = 42/75 (56%)
Query: 5 SC-GSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNVV 63
+C GS ++ G + ++ G + + +SL+ G+ G D K+F+ MPVR++V
Sbjct: 109 ACAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLV 168
Query: 64 SWTAIIAAFAQEWEV 78
+W+ ++++ + EV
Sbjct: 169 AWSTLVSSCLENGEV 183
>TAIR|locus:2170548 [details] [associations]
symbol:AT5G40410 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 GO:GO:0005739 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:1.25.40.10 PROSITE:PS51375
Pfam:PF01535 TIGRFAMs:TIGR00756 EMBL:AB006702 Pfam:PF13041
HOGENOM:HOG000237570 EMBL:AY062639 EMBL:BT008372 IPI:IPI00522697
RefSeq:NP_198857.2 UniGene:At.27281 ProteinModelPortal:Q9FND6
SMR:Q9FND6 PaxDb:Q9FND6 PRIDE:Q9FND6 EnsemblPlants:AT5G40410.1
GeneID:834039 KEGG:ath:AT5G40410 GeneFarm:3374 TAIR:At5g40410
eggNOG:NOG272143 InParanoid:Q9FND6 OMA:GCSYIEH PhylomeDB:Q9FND6
ProtClustDB:CLSN2681656 Genevestigator:Q9FND6 Uniprot:Q9FND6
Length = 608
Score = 95 (38.5 bits), Expect = 0.00091, P = 0.00091
Identities = 21/80 (26%), Positives = 41/80 (51%)
Query: 3 VTSCGSTRNIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPVRNV 62
V SC S R C V+S + ++G L+ + G ++ K+F++MP R++
Sbjct: 41 VKSCVSIELCR---LLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEMPERDL 97
Query: 63 VSWTAIIAAFAQEWEVDMCY 82
VSW ++I+ ++ + C+
Sbjct: 98 VSWNSLISGYSGRGYLGKCF 117
>TAIR|locus:2018092 [details] [associations]
symbol:MEF9 "AT1G62260" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0016554 "cytidine to uridine
editing" evidence=IMP] InterPro:IPR011990 InterPro:IPR002885
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005739 GO:GO:0016554
Gene3D:1.25.40.10 PROSITE:PS51375 EMBL:AC000375 Pfam:PF01535
Pfam:PF13812 TIGRFAMs:TIGR00756 Pfam:PF12854 Pfam:PF13041
HOGENOM:HOG000237570 IPI:IPI00546235 PIR:B96649 RefSeq:NP_176416.1
UniGene:At.66076 ProteinModelPortal:O04590 SMR:O04590 PaxDb:O04590
PRIDE:O04590 EnsemblPlants:AT1G62260.1 GeneID:842523
KEGG:ath:AT1G62260 GeneFarm:3623 TAIR:At1g62260 eggNOG:NOG295783
InParanoid:O04590 OMA:MPTHITF PhylomeDB:O04590
ProtClustDB:CLSN2682086 Genevestigator:O04590 Uniprot:O04590
Length = 656
Score = 95 (38.5 bits), Expect = 0.0010, P = 0.0010
Identities = 20/64 (31%), Positives = 41/64 (64%)
Query: 11 NIRGGTQYQCLAVRSGFVANVYVGSSLISFCGKCGENIDVYKMFEKMPV-RNVVSWTAII 69
N+R G Q + V++ + +V V ++LI+ +CGE ++ ++F++M + R V++W A+I
Sbjct: 424 NLRLGMQMHQIVVKT-VIPDVPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMI 482
Query: 70 AAFA 73
+A
Sbjct: 483 GGYA 486
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.326 0.136 0.441 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 86 86 0.00091 102 3 11 22 0.38 29
29 0.47 30
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 123
No. of states in DFA: 585 (62 KB)
Total size of DFA: 125 KB (2079 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 8.56u 0.18s 8.74t Elapsed: 00:00:00
Total cpu time: 8.57u 0.18s 8.75t Elapsed: 00:00:00
Start: Fri May 10 09:08:31 2013 End: Fri May 10 09:08:31 2013
WARNINGS ISSUED: 1