BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043596
(96 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SPB3|RL10_VITRI 60S ribosomal protein L10 OS=Vitis riparia GN=RPL10 PE=2 SV=1
Length = 220
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 66/89 (74%), Positives = 75/89 (84%), Gaps = 3/89 (3%)
Query: 6 QVDPTAGCNDGTDSNSHHAQEALRRAKFKFPVRQKIIVSRKWGFTKFSRANYLRCKSENR 65
QV + C DG NSHHAQEALRRAKFKFP RQKIIVSRKWGFTKF+R +Y++ KS+NR
Sbjct: 133 QVLLSVRCKDG---NSHHAQEALRRAKFKFPARQKIIVSRKWGFTKFNRTDYIKWKSQNR 189
Query: 66 IVPDGVNAKLFECHGPLANRQPGRAFLEA 94
I+PDGVNAKL CHGPLANRQPG+AF+ A
Sbjct: 190 ILPDGVNAKLLGCHGPLANRQPGKAFINA 218
>sp|Q40592|RL10_TOBAC 60S ribosomal protein L10 (Fragment) OS=Nicotiana tabacum GN=RPL10
PE=2 SV=1
Length = 150
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 69/90 (76%), Positives = 74/90 (82%), Gaps = 3/90 (3%)
Query: 6 QVDPTAGCNDGTDSNSHHAQEALRRAKFKFPVRQKIIVSRKWGFTKFSRANYLRCKSENR 65
QV + C DG N++HAQEALRRAKFKFP RQKIIVSRKWGFTKFSR +YL+ KSENR
Sbjct: 62 QVLLSVRCKDG---NANHAQEALRRAKFKFPRRQKIIVSRKWGFTKFSRTDYLKYKSENR 118
Query: 66 IVPDGVNAKLFECHGPLANRQPGRAFLEAT 95
IVPDGVNAKL CHG LA RQPGRAFLEA
Sbjct: 119 IVPDGVNAKLLGCHGRLAARQPGRAFLEAV 148
>sp|P93847|RL10_SOLME 60S ribosomal protein L10 OS=Solanum melongena GN=RPL10 PE=2 SV=1
Length = 219
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 68/90 (75%), Positives = 74/90 (82%), Gaps = 3/90 (3%)
Query: 6 QVDPTAGCNDGTDSNSHHAQEALRRAKFKFPVRQKIIVSRKWGFTKFSRANYLRCKSENR 65
QV + C DG NS+HAQEALRRAKFKFP RQKIIVSRKWGFTKFSR +YL+ KSENR
Sbjct: 133 QVLLSVRCKDG---NSNHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRTDYLKYKSENR 189
Query: 66 IVPDGVNAKLFECHGPLANRQPGRAFLEAT 95
IVPDGVNAKL HGPLA RQPGRAFL ++
Sbjct: 190 IVPDGVNAKLLGNHGPLAARQPGRAFLSSS 219
>sp|Q08770|RL102_ARATH 60S ribosomal protein L10-2 OS=Arabidopsis thaliana GN=RPL10B PE=2
SV=2
Length = 221
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 60/77 (77%), Positives = 66/77 (85%)
Query: 18 DSNSHHAQEALRRAKFKFPVRQKIIVSRKWGFTKFSRANYLRCKSENRIVPDGVNAKLFE 77
D++ HHAQEALRRAKFKFP RQKIIVSRKWGFTKF+RA+Y + + E RIVPDGVNAK
Sbjct: 142 DAHGHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFNRADYTKLRQEKRIVPDGVNAKFLS 201
Query: 78 CHGPLANRQPGRAFLEA 94
CHGPLANRQPG AFL A
Sbjct: 202 CHGPLANRQPGSAFLSA 218
>sp|Q9M5M7|RL10_EUPES 60S ribosomal protein L10 OS=Euphorbia esula GN=RPL10 PE=2 SV=1
Length = 220
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 62/78 (79%), Positives = 70/78 (89%)
Query: 18 DSNSHHAQEALRRAKFKFPVRQKIIVSRKWGFTKFSRANYLRCKSENRIVPDGVNAKLFE 77
D+NSH+AQEALRRAKFKFP RQKIIVSRKWGFTK +RA+Y R KSENRI+PDGVNAKL
Sbjct: 142 DNNSHNAQEALRRAKFKFPGRQKIIVSRKWGFTKINRADYPRLKSENRILPDGVNAKLLG 201
Query: 78 CHGPLANRQPGRAFLEAT 95
CHG LANR+PGRAF++A
Sbjct: 202 CHGRLANRKPGRAFIDAV 219
>sp|Q93VT9|RL101_ARATH 60S ribosomal protein L10-1 OS=Arabidopsis thaliana GN=RPL10A PE=1
SV=1
Length = 220
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 58/77 (75%), Positives = 66/77 (85%)
Query: 18 DSNSHHAQEALRRAKFKFPVRQKIIVSRKWGFTKFSRANYLRCKSENRIVPDGVNAKLFE 77
D++ HHAQEALRRAKFKFP RQKIIVSRKWGFTKF+RA++ + + E R+VPDGVNAK
Sbjct: 142 DAHGHHAQEALRRAKFKFPGRQKIIVSRKWGFTKFNRADFTKLRQEKRVVPDGVNAKFLS 201
Query: 78 CHGPLANRQPGRAFLEA 94
CHGPLANRQPG AFL A
Sbjct: 202 CHGPLANRQPGSAFLPA 218
>sp|O22431|RL10_PINTA 60S ribosomal protein L10 OS=Pinus taeda GN=RPL10 PE=2 SV=1
Length = 228
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 56/79 (70%), Positives = 71/79 (89%)
Query: 18 DSNSHHAQEALRRAKFKFPVRQKIIVSRKWGFTKFSRANYLRCKSENRIVPDGVNAKLFE 77
D++S+HAQEALRRAKFKFP R+KIIV+RKWGFTK++RA+YL+ K+ENRIVPDGVN KL
Sbjct: 142 DNHSNHAQEALRRAKFKFPGREKIIVNRKWGFTKYTRADYLKWKTENRIVPDGVNPKLLG 201
Query: 78 CHGPLANRQPGRAFLEATI 96
C GPL+NR+PG+AFL+ +
Sbjct: 202 CRGPLSNRKPGQAFLKPAV 220
>sp|Q93W22|RL103_ARATH 60S ribosomal protein L10-3 OS=Arabidopsis thaliana GN=RPL10C PE=2
SV=1
Length = 221
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 57/78 (73%), Positives = 64/78 (82%)
Query: 18 DSNSHHAQEALRRAKFKFPVRQKIIVSRKWGFTKFSRANYLRCKSENRIVPDGVNAKLFE 77
D++ HAQEALRRAKFKFP RQKIIVSRKWGFTKF+RA Y + ++ RIVPDGVNAK
Sbjct: 142 DNHGVHAQEALRRAKFKFPGRQKIIVSRKWGFTKFNRAEYTKLRAMKRIVPDGVNAKFLS 201
Query: 78 CHGPLANRQPGRAFLEAT 95
HGPLANRQPG AF+ AT
Sbjct: 202 NHGPLANRQPGSAFISAT 219
>sp|P45633|RL10_MAIZE 60S ribosomal protein L10 OS=Zea mays GN=RPL10 PE=2 SV=1
Length = 220
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 58/78 (74%), Positives = 64/78 (82%)
Query: 18 DSNSHHAQEALRRAKFKFPVRQKIIVSRKWGFTKFSRANYLRCKSENRIVPDGVNAKLFE 77
D+N+ HA EALRRAKFKFP RQKII SRKWGFTKFSRA+YL+ KSE RIVPDGVNAKL
Sbjct: 142 DNNAAHASEALRRAKFKFPARQKIIESRKWGFTKFSRADYLKYKSEGRIVPDGVNAKLLA 201
Query: 78 CHGPLANRQPGRAFLEAT 95
HG L R PG+AFL+A
Sbjct: 202 NHGRLEKRAPGKAFLDAV 219
>sp|Q0DKF0|RL102_ORYSJ 60S ribosomal protein L10-2 OS=Oryza sativa subsp. japonica GN=SG12
PE=2 SV=1
Length = 219
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 56/77 (72%), Positives = 62/77 (80%)
Query: 19 SNSHHAQEALRRAKFKFPVRQKIIVSRKWGFTKFSRANYLRCKSENRIVPDGVNAKLFEC 78
+N+ HA EALRRAKFKFP RQKII SRKWGFTKFSR Y+R KSE RI+PDGVNAKL C
Sbjct: 143 NNAVHASEALRRAKFKFPGRQKIIESRKWGFTKFSRDEYVRLKSEGRIMPDGVNAKLLGC 202
Query: 79 HGPLANRQPGRAFLEAT 95
HG L+ R PG+AFL A
Sbjct: 203 HGRLSARAPGKAFLSAA 219
>sp|A2Y0T4|RL102_ORYSI 60S ribosomal protein L10-2 OS=Oryza sativa subsp. indica GN=SG12
PE=2 SV=2
Length = 219
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 56/77 (72%), Positives = 62/77 (80%)
Query: 19 SNSHHAQEALRRAKFKFPVRQKIIVSRKWGFTKFSRANYLRCKSENRIVPDGVNAKLFEC 78
+N+ HA EALRRAKFKFP RQKII SRKWGFTKFSR Y+R KSE RI+PDGVNAKL C
Sbjct: 143 NNAVHASEALRRAKFKFPGRQKIIESRKWGFTKFSRDEYVRLKSEGRIMPDGVNAKLLGC 202
Query: 79 HGPLANRQPGRAFLEAT 95
HG L+ R PG+AFL A
Sbjct: 203 HGRLSARAPGKAFLSAA 219
>sp|Q0ITS8|RL101_ORYSJ 60S ribosomal protein L10-1 OS=Oryza sativa subsp. japonica GN=SC34
PE=2 SV=1
Length = 224
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 53/79 (67%), Positives = 63/79 (79%)
Query: 18 DSNSHHAQEALRRAKFKFPVRQKIIVSRKWGFTKFSRANYLRCKSENRIVPDGVNAKLFE 77
+SN+ HA+EALRRAKFKFP RQKII SRKWGFTKF+R Y++ K+E RI+ DGVNA+L
Sbjct: 142 ESNAKHAEEALRRAKFKFPGRQKIIHSRKWGFTKFTREEYVKLKAEGRIMSDGVNAQLLG 201
Query: 78 CHGPLANRQPGRAFLEATI 96
HG LA R PG+AFL TI
Sbjct: 202 SHGRLAKRAPGKAFLAETI 220
>sp|A2ZCQ7|RL101_ORYSI 60S ribosomal protein L10-1 OS=Oryza sativa subsp. indica GN=SC34
PE=2 SV=2
Length = 224
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 53/79 (67%), Positives = 63/79 (79%)
Query: 18 DSNSHHAQEALRRAKFKFPVRQKIIVSRKWGFTKFSRANYLRCKSENRIVPDGVNAKLFE 77
+SN+ HA+EALRRAKFKFP RQKII SRKWGFTKF+R Y++ K+E RI+ DGVNA+L
Sbjct: 142 ESNAKHAEEALRRAKFKFPGRQKIIHSRKWGFTKFTREEYVKLKAEGRIMSDGVNAQLLG 201
Query: 78 CHGPLANRQPGRAFLEATI 96
HG LA R PG+AFL TI
Sbjct: 202 SHGRLAKRAPGKAFLAETI 220
>sp|O61231|RL10_DROME 60S ribosomal protein L10 OS=Drosophila melanogaster GN=RpL10 PE=2
SV=1
Length = 218
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 47/67 (70%), Gaps = 2/67 (2%)
Query: 19 SNSHHAQ--EALRRAKFKFPVRQKIIVSRKWGFTKFSRANYLRCKSENRIVPDGVNAKLF 76
S+ + AQ EALRRAKFKFP RQKI VS+KWGFTK+ R Y + +NR+ PDG N K
Sbjct: 141 SDRYKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYERERYEELRDDNRLEPDGCNVKYR 200
Query: 77 ECHGPLA 83
HGP+A
Sbjct: 201 PEHGPIA 207
>sp|Q09533|RL10_CAEEL 60S ribosomal protein L10 OS=Caenorhabditis elegans GN=rpl-10 PE=3
SV=1
Length = 214
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 45/66 (68%)
Query: 18 DSNSHHAQEALRRAKFKFPVRQKIIVSRKWGFTKFSRANYLRCKSENRIVPDGVNAKLFE 77
+ N HA EA RRAKFKFP RQ I+ SRKWGFTK+ R +Y R ++E R+ DGV +L
Sbjct: 142 EGNVKHAIEAFRRAKFKFPGRQIIVSSRKWGFTKWDREDYERMRAEGRLRSDGVGVQLQR 201
Query: 78 CHGPLA 83
HGPL
Sbjct: 202 EHGPLT 207
>sp|Q4R4D3|RL10L_MACFA 60S ribosomal protein L10-like OS=Macaca fascicularis GN=RPL10L
PE=2 SV=1
Length = 214
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 42/63 (66%)
Query: 20 NSHHAQEALRRAKFKFPVRQKIIVSRKWGFTKFSRANYLRCKSENRIVPDGVNAKLFECH 79
N H EALRRAKFKFP RQKI +S+KWGFTKF+ + ++ R++PDG K H
Sbjct: 144 NKEHVIEALRRAKFKFPGRQKIHISKKWGFTKFNADEFEDMVAKKRLIPDGCGVKYVPSH 203
Query: 80 GPL 82
GPL
Sbjct: 204 GPL 206
>sp|Q54J69|RL10_DICDI 60S ribosomal protein L10 OS=Dictyostelium discoideum GN=rpl10 PE=1
SV=2
Length = 217
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 43/58 (74%)
Query: 26 EALRRAKFKFPVRQKIIVSRKWGFTKFSRANYLRCKSENRIVPDGVNAKLFECHGPLA 83
EALRR+ +KFP RQKI+VS+KWGFT ++R Y + K++ R++ DG N K+ HG LA
Sbjct: 150 EALRRSSYKFPGRQKIVVSKKWGFTAYNREAYQKLKADGRLMNDGANVKVITNHGTLA 207
>sp|A8D8X1|RL10_SHEEP 60S ribosomal protein L10 OS=Ovis aries GN=RPL10 PE=2 SV=1
Length = 214
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 41/63 (65%)
Query: 20 NSHHAQEALRRAKFKFPVRQKIIVSRKWGFTKFSRANYLRCKSENRIVPDGVNAKLFECH 79
N H EALRRAKFKFP RQKI +S+KWGFTKF+ + +E R++PDG K
Sbjct: 144 NKEHVIEALRRAKFKFPGRQKIHISKKWGFTKFNADEFENMVAEKRLIPDGCGVKYIPNR 203
Query: 80 GPL 82
GPL
Sbjct: 204 GPL 206
>sp|Q29195|RL10_PIG 60S ribosomal protein L10 OS=Sus scrofa GN=RPL10 PE=2 SV=3
Length = 214
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 41/63 (65%)
Query: 20 NSHHAQEALRRAKFKFPVRQKIIVSRKWGFTKFSRANYLRCKSENRIVPDGVNAKLFECH 79
N H EALRRAKFKFP RQKI +S+KWGFTKF+ + +E R++PDG K
Sbjct: 144 NKEHVIEALRRAKFKFPGRQKIHISKKWGFTKFNADEFENMVAEKRLIPDGCGVKYIPNR 203
Query: 80 GPL 82
GPL
Sbjct: 204 GPL 206
>sp|Q9XSI3|RL10_BOVIN 60S ribosomal protein L10 OS=Bos taurus GN=RPL10 PE=2 SV=4
Length = 214
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 41/63 (65%)
Query: 20 NSHHAQEALRRAKFKFPVRQKIIVSRKWGFTKFSRANYLRCKSENRIVPDGVNAKLFECH 79
N H EALRRAKFKFP RQKI +S+KWGFTKF+ + +E R++PDG K
Sbjct: 144 NKEHVIEALRRAKFKFPGRQKIHISKKWGFTKFNADEFENMVAEKRLIPDGCGVKYIPNR 203
Query: 80 GPL 82
GPL
Sbjct: 204 GPL 206
>sp|Q6PDV7|RL10_RAT 60S ribosomal protein L10 OS=Rattus norvegicus GN=Rpl10 PE=1 SV=3
Length = 214
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 41/63 (65%)
Query: 20 NSHHAQEALRRAKFKFPVRQKIIVSRKWGFTKFSRANYLRCKSENRIVPDGVNAKLFECH 79
N H EALRRAKFKFP RQKI +S+KWGFTKF+ + +E R++PDG K
Sbjct: 144 NKEHVIEALRRAKFKFPGRQKIHISKKWGFTKFNADEFEDMVAEKRLIPDGCGVKYIPNR 203
Query: 80 GPL 82
GPL
Sbjct: 204 GPL 206
>sp|A9CB60|RL10_PAPAN 60S ribosomal protein L10 OS=Papio anubis GN=RPL10 PE=3 SV=1
Length = 214
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 41/63 (65%)
Query: 20 NSHHAQEALRRAKFKFPVRQKIIVSRKWGFTKFSRANYLRCKSENRIVPDGVNAKLFECH 79
N H EALRRAKFKFP RQKI +S+KWGFTKF+ + +E R++PDG K
Sbjct: 144 NKEHVIEALRRAKFKFPGRQKIHISKKWGFTKFNADEFEDMVAEKRLIPDGCGVKYIPNR 203
Query: 80 GPL 82
GPL
Sbjct: 204 GPL 206
>sp|Q6ZWV3|RL10_MOUSE 60S ribosomal protein L10 OS=Mus musculus GN=Rpl10 PE=2 SV=3
Length = 214
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 41/63 (65%)
Query: 20 NSHHAQEALRRAKFKFPVRQKIIVSRKWGFTKFSRANYLRCKSENRIVPDGVNAKLFECH 79
N H EALRRAKFKFP RQKI +S+KWGFTKF+ + +E R++PDG K
Sbjct: 144 NKEHVIEALRRAKFKFPGRQKIHISKKWGFTKFNADEFEDMVAEKRLIPDGCGVKYIPNR 203
Query: 80 GPL 82
GPL
Sbjct: 204 GPL 206
>sp|P27635|RL10_HUMAN 60S ribosomal protein L10 OS=Homo sapiens GN=RPL10 PE=1 SV=4
Length = 214
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 41/63 (65%)
Query: 20 NSHHAQEALRRAKFKFPVRQKIIVSRKWGFTKFSRANYLRCKSENRIVPDGVNAKLFECH 79
N H EALRRAKFKFP RQKI +S+KWGFTKF+ + +E R++PDG K
Sbjct: 144 NKEHVIEALRRAKFKFPGRQKIHISKKWGFTKFNADEFEDMVAEKRLIPDGCGVKYIPNR 203
Query: 80 GPL 82
GPL
Sbjct: 204 GPL 206
>sp|Q4R7Y2|RL10_MACFA 60S ribosomal protein L10 OS=Macaca fascicularis GN=RPL10 PE=2 SV=1
Length = 214
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 41/63 (65%)
Query: 20 NSHHAQEALRRAKFKFPVRQKIIVSRKWGFTKFSRANYLRCKSENRIVPDGVNAKLFECH 79
N H EALRRAKFKFP RQKI +S+KWGFTKF+ + +E R++PDG K
Sbjct: 144 NKEHVIEALRRAKFKFPGRQKIHISKKWGFTKFNADEFEDMVAEKRLIPDGCGVKYIPNR 203
Query: 80 GPL 82
GPL
Sbjct: 204 GPL 206
>sp|Q5R931|RL10_PONAB 60S ribosomal protein L10 OS=Pongo abelii GN=RPL10 PE=2 SV=3
Length = 214
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 41/63 (65%)
Query: 20 NSHHAQEALRRAKFKFPVRQKIIVSRKWGFTKFSRANYLRCKSENRIVPDGVNAKLFECH 79
N H EALRRAKFKFP RQKI +S+KWGFTKF+ + +E R++PDG K
Sbjct: 144 NKEHVIEALRRAKFKFPGRQKIHISKKWGFTKFNADEFEDMVAEKRLIPDGCGVKYTPNR 203
Query: 80 GPL 82
GPL
Sbjct: 204 GPL 206
>sp|Q08200|RL10_CHICK 60S ribosomal protein L10 (Fragment) OS=Gallus gallus GN=RPL10 PE=2
SV=1
Length = 210
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 41/63 (65%)
Query: 20 NSHHAQEALRRAKFKFPVRQKIIVSRKWGFTKFSRANYLRCKSENRIVPDGVNAKLFECH 79
N H EALRRAKFKFP RQKI +S+KWGFTKF+ + ++ R++PDG K
Sbjct: 139 NKEHVVEALRRAKFKFPGRQKIHISKKWGFTKFNADAFEEMVAQKRLIPDGCGVKYVPGR 198
Query: 80 GPL 82
GPL
Sbjct: 199 GPL 201
>sp|Q96L21|RL10L_HUMAN 60S ribosomal protein L10-like OS=Homo sapiens GN=RPL10L PE=1 SV=3
Length = 214
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 41/63 (65%)
Query: 20 NSHHAQEALRRAKFKFPVRQKIIVSRKWGFTKFSRANYLRCKSENRIVPDGVNAKLFECH 79
N H EALRRAKFKFP RQKI +S+KWGFTKF+ + ++ ++PDG K H
Sbjct: 144 NEEHVIEALRRAKFKFPGRQKIHISKKWGFTKFNADEFEDMVAKKCLIPDGCGVKYVPSH 203
Query: 80 GPL 82
GPL
Sbjct: 204 GPL 206
>sp|Q235M8|RL10_TETTS 60S ribosomal protein L10 OS=Tetrahymena thermophila (strain SB210)
GN=RPL10 PE=1 SV=1
Length = 215
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 44/61 (72%)
Query: 23 HAQEALRRAKFKFPVRQKIIVSRKWGFTKFSRANYLRCKSENRIVPDGVNAKLFECHGPL 82
+A +AL RAK KFP RQK++ S+KWGFTK +RA Y R +++ ++V DG N K+ GPL
Sbjct: 147 YAIDALTRAKAKFPGRQKVVTSQKWGFTKLTRAQYSRLRNQKKLVTDGSNVKVIGERGPL 206
Query: 83 A 83
+
Sbjct: 207 S 207
>sp|Q9P769|RL10B_SCHPO 60S ribosomal protein L10-B OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=rpl10b PE=3 SV=1
Length = 221
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 45/68 (66%)
Query: 18 DSNSHHAQEALRRAKFKFPVRQKIIVSRKWGFTKFSRANYLRCKSENRIVPDGVNAKLFE 77
DS+ A EALRR ++KFP +Q+IIVS+KWGF++++R Y+ +S I+PDG AK
Sbjct: 142 DSSRATAIEALRRCQYKFPGQQRIIVSKKWGFSQYARDEYIEKRSRGEIIPDGCYAKFLN 201
Query: 78 CHGPLANR 85
G L +
Sbjct: 202 KRGSLQEK 209
>sp|Q2TBW8|RL10L_BOVIN 60S ribosomal protein L10-like OS=Bos taurus GN=RPL10L PE=2 SV=1
Length = 214
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 41/63 (65%)
Query: 20 NSHHAQEALRRAKFKFPVRQKIIVSRKWGFTKFSRANYLRCKSENRIVPDGVNAKLFECH 79
N H EALRRAKFKFP RQKI +S+KWGFTKF+ + ++ R++PDG K
Sbjct: 144 NKEHVIEALRRAKFKFPGRQKIHISKKWGFTKFNADEFEDKVAKKRLIPDGCGVKYVPNR 203
Query: 80 GPL 82
GPL
Sbjct: 204 GPL 206
>sp|Q09127|RL10A_SCHPO 60S ribosomal protein L10-A OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=rpl10a PE=2 SV=2
Length = 221
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 45/68 (66%)
Query: 18 DSNSHHAQEALRRAKFKFPVRQKIIVSRKWGFTKFSRANYLRCKSENRIVPDGVNAKLFE 77
DS+ A EALRR ++KFP +Q+IIVS+KWGF++++R Y+ +S I+PDG AK
Sbjct: 142 DSSRATAIEALRRCQYKFPGQQRIIVSKKWGFSQYARDEYIEKRSRGEIIPDGCYAKFLN 201
Query: 78 CHGPLANR 85
G L +
Sbjct: 202 KRGSLQEK 209
>sp|P86048|RL10L_MOUSE 60S ribosomal protein L10-like OS=Mus musculus GN=Rpl10l PE=2 SV=1
Length = 214
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 40/63 (63%)
Query: 20 NSHHAQEALRRAKFKFPVRQKIIVSRKWGFTKFSRANYLRCKSENRIVPDGVNAKLFECH 79
N H EALRRAKFKFP RQKI +S+KWGFTKF+ + + R++PDG K
Sbjct: 144 NKEHVIEALRRAKFKFPGRQKIHISKKWGFTKFNADEFEDKVAAKRLIPDGCGVKYIPER 203
Query: 80 GPL 82
GPL
Sbjct: 204 GPL 206
>sp|O96647|RL10_BOMMA 60S ribosomal protein L10 OS=Bombyx mandarina GN=RpL10 PE=2 SV=1
Length = 219
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 41/66 (62%)
Query: 17 TDSNSHHAQEALRRAKFKFPVRQKIIVSRKWGFTKFSRANYLRCKSENRIVPDGVNAKLF 76
+D EALRRAKFKFP RQKI VS+KWGFTK+ R + + + E R+ DG +
Sbjct: 141 SDRWKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYERDEFEKLREEGRLANDGCIVQYR 200
Query: 77 ECHGPL 82
HGPL
Sbjct: 201 PEHGPL 206
>sp|P41805|RL10_YEAST 60S ribosomal protein L10 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=RPL10 PE=1 SV=1
Length = 221
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 38/67 (56%)
Query: 18 DSNSHHAQEALRRAKFKFPVRQKIIVSRKWGFTKFSRANYLRCKSENRIVPDGVNAKLFE 77
DSN E LRRA++KFP +QKII+S+KWGFT R YL+ + + DG K
Sbjct: 142 DSNKDVVVEGLRRARYKFPGQQKIILSKKWGFTNLDRPEYLKKREAGEVKDDGAFVKFLS 201
Query: 78 CHGPLAN 84
G L N
Sbjct: 202 KKGSLEN 208
>sp|Q39724|RL10_EUGGR 60S ribosomal protein L10 OS=Euglena gracilis GN=RPL10 PE=2 SV=1
Length = 215
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 32/56 (57%)
Query: 27 ALRRAKFKFPVRQKIIVSRKWGFTKFSRANYLRCKSENRIVPDGVNAKLFECHGPL 82
AL+RA +KF RQ I S WGFT+ NY++ K E + DGV+ K+ G L
Sbjct: 151 ALKRASYKFAGRQVIAKSTMWGFTEIRSENYVKWKEEGKFRVDGVSTKILRNRGRL 206
>sp|Q8SR96|RL10_ENCCU 60S ribosomal protein L10 OS=Encephalitozoon cuniculi (strain
GB-M1) GN=RPL10 PE=1 SV=1
Length = 219
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 27/47 (57%)
Query: 24 AQEALRRAKFKFPVRQKIIVSRKWGFTKFSRANYLRCKSENRIVPDG 70
A EALRRAK KFP QKI VS K+GFT + + RI+ G
Sbjct: 148 AVEALRRAKNKFPGHQKIQVSSKFGFTNMFSDEFNKLNESGRIILRG 194
>sp|A6USY4|RL10_META3 50S ribosomal protein L10e OS=Methanococcus aeolicus (strain
Nankai-3 / ATCC BAA-1280) GN=rpl10e PE=3 SV=1
Length = 173
Score = 32.7 bits (73), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 20/35 (57%)
Query: 17 TDSNSHHAQEALRRAKFKFPVRQKIIVSRKWGFTK 51
T N HA+EALRR K PV+ KI++ + K
Sbjct: 138 TPENVIHAKEALRRCNMKMPVKCKIVIGKGAELVK 172
>sp|A8MDE4|RL10_CALMQ 50S ribosomal protein L10e OS=Caldivirga maquilingensis (strain
ATCC 700844 / DSMZ 13496 / JCM 10307 / IC-167) GN=rpl10e
PE=3 SV=1
Length = 175
Score = 30.0 bits (66), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Query: 4 SMQVDP--TAGCNDGTDSNSHHAQEALRRAKFKFPVRQKIIVSRK 46
++Q++P + D N HA+EAL RA+ K P+ +I ++RK
Sbjct: 126 AIQIEPGEVLMIVEVEDRNITHAKEALNRARAKLPLPCRIELTRK 170
>sp|Q318J1|RL16_PROM9 50S ribosomal protein L16 OS=Prochlorococcus marinus (strain MIT
9312) GN=rplP PE=3 SV=1
Length = 160
Score = 30.0 bits (66), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 19/31 (61%)
Query: 16 GTDSNSHHAQEALRRAKFKFPVRQKIIVSRK 46
G D A+EA+R A++K PV+ K I S K
Sbjct: 108 GDDITEEIAKEAMRLAQYKLPVKTKFISSDK 138
>sp|A1RXM2|RL10_THEPD 50S ribosomal protein L10e OS=Thermofilum pendens (strain Hrk 5)
GN=rpl10e PE=3 SV=1
Length = 168
Score = 29.6 bits (65), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 14/26 (53%), Positives = 18/26 (69%)
Query: 20 NSHHAQEALRRAKFKFPVRQKIIVSR 45
N HA+EALRRA K P+ +IIV +
Sbjct: 141 NIDHAKEALRRAASKIPLPSRIIVEQ 166
>sp|O27191|RL10_METTH 50S ribosomal protein L10e OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=rpl10e PE=3 SV=1
Length = 160
Score = 29.6 bits (65), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 19/32 (59%)
Query: 20 NSHHAQEALRRAKFKFPVRQKIIVSRKWGFTK 51
N A+EALRRA KFPV +I++ R K
Sbjct: 129 NFKDAKEALRRAAMKFPVPCRIVIDRGEELVK 160
>sp|Q8TYP2|RL10_METKA 50S ribosomal protein L10e OS=Methanopyrus kandleri (strain AV19 /
DSM 6324 / JCM 9639 / NBRC 100938) GN=rpl10e PE=3 SV=1
Length = 173
Score = 29.6 bits (65), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 17/27 (62%)
Query: 19 SNSHHAQEALRRAKFKFPVRQKIIVSR 45
N HA+EALRRA KFP I+V +
Sbjct: 140 ENFEHAKEALRRAGMKFPFPFTIVVDK 166
>sp|Q1GK27|RL16_RUEST 50S ribosomal protein L16 OS=Ruegeria sp. (strain TM1040) GN=rplP
PE=3 SV=1
Length = 137
Score = 29.6 bits (65), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 17/28 (60%)
Query: 20 NSHHAQEALRRAKFKFPVRQKIIVSRKW 47
N A+EALR A K PV+ +I+V W
Sbjct: 110 NEDIAREALRLAAMKLPVQTRIVVREDW 137
>sp|Q5LW55|RL16_RUEPO 50S ribosomal protein L16 OS=Ruegeria pomeroyi (strain ATCC 700808
/ DSM 15171 / DSS-3) GN=rplP PE=3 SV=1
Length = 137
Score = 29.3 bits (64), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 17/28 (60%)
Query: 20 NSHHAQEALRRAKFKFPVRQKIIVSRKW 47
N A+EALR A K P++ +++V W
Sbjct: 110 NDEIAREALRLAAMKLPIKTRVVVREDW 137
>sp|Q16AE4|RL16_ROSDO 50S ribosomal protein L16 OS=Roseobacter denitrificans (strain ATCC
33942 / OCh 114) GN=rplP PE=3 SV=1
Length = 137
Score = 28.9 bits (63), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 17/28 (60%)
Query: 20 NSHHAQEALRRAKFKFPVRQKIIVSRKW 47
N A+EALR A K P++ +++V W
Sbjct: 110 NDDVAREALRLAAMKLPIKTRVVVREDW 137
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.134 0.419
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,869,183
Number of Sequences: 539616
Number of extensions: 1108918
Number of successful extensions: 2212
Number of sequences better than 100.0: 46
Number of HSP's better than 100.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 2166
Number of HSP's gapped (non-prelim): 46
length of query: 96
length of database: 191,569,459
effective HSP length: 66
effective length of query: 30
effective length of database: 155,954,803
effective search space: 4678644090
effective search space used: 4678644090
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)