Query 043601
Match_columns 488
No_of_seqs 184 out of 2195
Neff 10.5
Searched_HMMs 46136
Date Fri Mar 29 06:32:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043601.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/043601hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1176 Acyl-CoA synthetase [L 100.0 1.9E-69 4.2E-74 527.4 45.9 445 33-487 22-499 (537)
2 COG0365 Acs Acyl-coenzyme A sy 100.0 9.5E-69 2.1E-73 519.5 41.6 436 27-486 8-488 (528)
3 KOG1177 Long chain fatty acid 100.0 3.5E-68 7.5E-73 483.4 36.1 451 26-487 49-554 (596)
4 COG0318 CaiC Acyl-CoA syntheta 100.0 1.9E-65 4.1E-70 517.3 48.2 448 25-487 9-494 (534)
5 PRK07788 acyl-CoA synthetase; 100.0 3.5E-64 7.6E-69 513.8 46.7 443 27-487 49-518 (549)
6 PLN02574 4-coumarate--CoA liga 100.0 3.4E-63 7.3E-68 506.9 53.0 473 9-488 22-522 (560)
7 PLN02654 acetate-CoA ligase 100.0 1.5E-62 3.2E-67 509.2 48.6 458 26-487 86-607 (666)
8 PRK07529 AMP-binding domain pr 100.0 6.2E-62 1.3E-66 502.9 50.3 457 24-487 22-536 (632)
9 TIGR02316 propion_prpE propion 100.0 4E-62 8.7E-67 504.7 48.0 455 27-487 51-571 (628)
10 PLN02246 4-coumarate--CoA liga 100.0 1.8E-61 3.9E-66 492.5 51.4 463 10-487 8-503 (537)
11 PLN02330 4-coumarate--CoA liga 100.0 1.4E-61 3.1E-66 494.0 50.2 469 7-487 10-508 (546)
12 TIGR02188 Ac_CoA_lig_AcsA acet 100.0 1.9E-61 4.2E-66 500.4 49.1 455 27-487 56-569 (625)
13 PTZ00237 acetyl-CoA synthetase 100.0 1.2E-61 2.6E-66 500.8 46.6 456 27-487 58-590 (647)
14 PRK00174 acetyl-CoA synthetase 100.0 5.8E-61 1.3E-65 497.6 49.5 455 27-487 66-577 (637)
15 PLN02614 long-chain acyl-CoA s 100.0 2.1E-61 4.6E-66 499.5 45.9 433 27-469 45-567 (666)
16 PRK08314 long-chain-fatty-acid 100.0 1.1E-60 2.3E-65 488.4 49.1 453 24-487 7-509 (546)
17 PRK13382 acyl-CoA synthetase; 100.0 1.1E-60 2.3E-65 486.0 48.2 442 26-488 42-508 (537)
18 PLN02860 o-succinylbenzoate-Co 100.0 5.3E-61 1.2E-65 491.0 45.3 448 26-487 6-520 (563)
19 PTZ00342 acyl-CoA synthetase; 100.0 7.4E-61 1.6E-65 494.2 46.4 434 26-469 60-641 (746)
20 PRK13295 cyclohexanecarboxylat 100.0 1.4E-60 3E-65 486.9 46.2 445 27-487 24-511 (547)
21 PLN03052 acetate--CoA ligase; 100.0 3E-60 6.6E-65 493.0 48.3 452 26-485 173-682 (728)
22 PRK06334 long chain fatty acid 100.0 2.2E-60 4.8E-65 483.0 45.7 434 27-485 19-499 (539)
23 PRK06839 acyl-CoA synthetase; 100.0 5E-60 1.1E-64 478.2 46.7 433 28-488 3-463 (496)
24 PRK10524 prpE propionyl-CoA sy 100.0 7.1E-60 1.5E-64 489.0 48.0 455 27-487 52-572 (629)
25 PRK08316 acyl-CoA synthetase; 100.0 1.4E-59 3.1E-64 478.1 48.4 451 25-487 9-486 (523)
26 PLN02736 long-chain acyl-CoA s 100.0 8E-60 1.7E-64 489.2 47.3 433 26-469 43-558 (651)
27 PLN02861 long-chain-fatty-acid 100.0 2.8E-60 6.2E-65 491.6 43.6 431 27-468 43-563 (660)
28 PRK07656 long-chain-fatty-acid 100.0 3.7E-59 8.1E-64 473.9 50.7 450 26-488 4-484 (513)
29 PRK05605 long-chain-fatty-acid 100.0 1.6E-59 3.5E-64 481.9 48.3 455 26-487 31-536 (573)
30 PRK06060 acyl-CoA synthetase; 100.0 9.5E-60 2.1E-64 493.4 46.6 429 27-487 4-459 (705)
31 PRK07638 acyl-CoA synthetase; 100.0 2E-59 4.4E-64 472.1 46.4 425 27-487 1-448 (487)
32 PRK06155 crotonobetaine/carnit 100.0 5.4E-59 1.2E-63 473.7 48.8 442 25-488 19-492 (542)
33 PRK04319 acetyl-CoA synthetase 100.0 3.2E-59 7E-64 478.8 47.5 448 27-487 42-526 (570)
34 PRK05677 long-chain-fatty-acid 100.0 1.4E-58 3.1E-63 473.3 50.9 451 27-487 24-524 (562)
35 PRK06145 acyl-CoA synthetase; 100.0 1.2E-58 2.6E-63 467.9 49.6 440 27-487 2-464 (497)
36 PRK09274 peptide synthase; Pro 100.0 3.9E-59 8.4E-64 477.1 44.6 440 26-486 5-509 (552)
37 PRK06187 long-chain-fatty-acid 100.0 2.3E-58 5E-63 469.2 49.0 450 24-487 3-486 (521)
38 COG1021 EntE Peptide arylation 100.0 1.7E-60 3.8E-65 423.5 28.8 445 19-485 22-502 (542)
39 PRK08315 AMP-binding domain pr 100.0 2.4E-58 5.2E-63 472.4 48.8 453 24-487 13-518 (559)
40 PRK07786 long-chain-fatty-acid 100.0 5.4E-58 1.2E-62 467.2 51.1 444 26-487 16-491 (542)
41 TIGR03208 cyc_hxne_CoA_lg cycl 100.0 3.6E-58 7.7E-63 468.4 49.1 445 27-487 22-509 (538)
42 PRK03584 acetoacetyl-CoA synth 100.0 3.4E-58 7.4E-63 478.1 49.3 453 25-488 84-593 (655)
43 PRK03640 O-succinylbenzoic aci 100.0 4.7E-58 1E-62 462.1 48.0 425 27-487 2-449 (483)
44 PRK13383 acyl-CoA synthetase; 100.0 2.8E-58 6E-63 466.8 46.5 433 26-487 34-487 (516)
45 PRK05852 acyl-CoA synthetase; 100.0 4.1E-58 8.9E-63 467.5 47.8 449 27-487 16-499 (534)
46 TIGR03098 ligase_PEP_1 acyl-Co 100.0 8E-58 1.7E-62 464.3 49.2 445 28-488 1-486 (515)
47 PRK08008 caiC putative crotono 100.0 6.3E-58 1.4E-62 464.9 47.7 447 27-487 7-489 (517)
48 PRK12583 acyl-CoA synthetase; 100.0 1.2E-57 2.6E-62 467.4 50.2 451 26-487 17-519 (558)
49 PRK07514 malonyl-CoA synthase; 100.0 1.1E-57 2.3E-62 462.0 47.7 437 27-487 3-468 (504)
50 TIGR01217 ac_ac_CoA_syn acetoa 100.0 1.1E-57 2.4E-62 472.1 48.0 453 25-488 85-594 (652)
51 TIGR02275 DHB_AMP_lig 2,3-dihy 100.0 2E-57 4.4E-62 461.6 48.8 440 27-487 23-499 (527)
52 COG1022 FAA1 Long-chain acyl-C 100.0 3.2E-58 7E-63 452.0 40.2 417 26-469 15-519 (613)
53 PRK07470 acyl-CoA synthetase; 100.0 2.2E-57 4.7E-62 462.0 47.5 444 26-487 6-485 (528)
54 PRK06087 short chain acyl-CoA 100.0 4.1E-57 8.8E-62 461.8 49.0 442 27-484 23-499 (547)
55 PLN02387 long-chain-fatty-acid 100.0 1E-57 2.2E-62 474.5 44.9 433 27-469 58-606 (696)
56 PRK07008 long-chain-fatty-acid 100.0 2.6E-57 5.6E-62 461.7 46.6 452 27-487 10-500 (539)
57 PRK06178 acyl-CoA synthetase; 100.0 9.4E-57 2E-61 460.9 50.4 473 10-487 16-533 (567)
58 PRK06710 long-chain-fatty-acid 100.0 8.3E-57 1.8E-61 460.9 49.6 471 9-487 4-522 (563)
59 PRK06018 putative acyl-CoA syn 100.0 6.2E-57 1.4E-61 459.4 48.0 458 21-487 4-501 (542)
60 PRK09088 acyl-CoA synthetase; 100.0 7E-57 1.5E-61 453.9 47.3 424 34-487 2-452 (488)
61 PLN03102 acyl-activating enzym 100.0 9.3E-57 2E-61 460.4 48.5 449 25-487 12-521 (579)
62 PRK06188 acyl-CoA synthetase; 100.0 1E-56 2.2E-61 456.6 48.4 441 25-487 10-484 (524)
63 PRK07867 acyl-CoA synthetase; 100.0 2E-56 4.2E-61 453.3 49.2 429 27-485 5-470 (529)
64 PRK07769 long-chain-fatty-acid 100.0 8.9E-58 1.9E-62 473.3 39.7 437 25-487 19-577 (631)
65 PRK08279 long-chain-acyl-CoA s 100.0 4.1E-57 8.8E-62 466.2 44.2 448 21-488 31-532 (600)
66 PRK07059 Long-chain-fatty-acid 100.0 2.9E-56 6.4E-61 456.2 50.2 470 10-487 3-525 (557)
67 KOG1256 Long-chain acyl-CoA sy 100.0 1.1E-57 2.4E-62 441.2 36.9 441 22-470 70-599 (691)
68 PRK12492 long-chain-fatty-acid 100.0 2.7E-56 5.9E-61 456.5 48.7 451 27-487 24-531 (562)
69 PRK13388 acyl-CoA synthetase; 100.0 2.4E-56 5.1E-61 454.2 47.9 427 27-485 3-469 (540)
70 PRK05857 acyl-CoA synthetase; 100.0 4.7E-57 1E-61 459.6 42.7 426 26-470 13-476 (540)
71 PRK08180 feruloyl-CoA synthase 100.0 2.4E-57 5.2E-62 467.9 40.6 438 26-487 38-549 (614)
72 PRK12467 peptide synthase; Pro 100.0 1.8E-57 4E-62 541.1 45.4 431 27-488 3095-3562(3956)
73 TIGR03205 pimA dicarboxylate-- 100.0 1.5E-55 3.2E-60 449.5 50.9 455 26-487 20-513 (541)
74 PRK05620 long-chain-fatty-acid 100.0 5.4E-56 1.2E-60 455.6 47.6 457 24-487 7-524 (576)
75 PRK10252 entF enterobactin syn 100.0 1.4E-56 2.9E-61 501.0 45.9 435 25-488 456-935 (1296)
76 PRK10946 entE enterobactin syn 100.0 1E-55 2.2E-60 449.6 47.6 437 27-487 25-499 (536)
77 PRK05851 long-chain-fatty-acid 100.0 7.5E-57 1.6E-61 456.5 38.2 432 27-486 1-484 (525)
78 PTZ00216 acyl-CoA synthetase; 100.0 2.3E-56 5E-61 465.5 42.5 427 26-468 68-608 (700)
79 PLN02430 long-chain-fatty-acid 100.0 5.1E-56 1.1E-60 459.1 44.6 436 26-469 41-564 (660)
80 PRK08043 bifunctional acyl-[ac 100.0 2.1E-56 4.6E-61 468.3 42.3 434 25-487 202-680 (718)
81 PRK06164 acyl-CoA synthetase; 100.0 1.4E-55 2.9E-60 450.0 47.2 447 26-487 9-496 (540)
82 TIGR01734 D-ala-DACP-lig D-ala 100.0 6E-56 1.3E-60 449.0 44.2 431 28-487 1-469 (502)
83 PRK07868 acyl-CoA synthetase; 100.0 7.5E-56 1.6E-60 474.7 46.7 446 24-487 444-925 (994)
84 TIGR02262 benz_CoA_lig benzoat 100.0 2.4E-55 5.2E-60 444.8 47.7 438 31-487 8-478 (508)
85 PRK12316 peptide synthase; Pro 100.0 2.6E-56 5.6E-61 539.1 47.7 431 26-488 510-974 (5163)
86 PRK12467 peptide synthase; Pro 100.0 5.2E-56 1.1E-60 528.7 47.8 433 27-487 1574-2052(3956)
87 PRK12316 peptide synthase; Pro 100.0 4E-56 8.6E-61 537.5 46.8 433 27-488 2003-2472(5163)
88 PRK12476 putative fatty-acid-- 100.0 2.7E-56 5.8E-61 460.3 38.9 434 26-487 33-569 (612)
89 TIGR03443 alpha_am_amid L-amin 100.0 8.2E-56 1.8E-60 496.3 45.7 450 27-488 236-796 (1389)
90 PRK08751 putative long-chain f 100.0 7.1E-55 1.5E-59 446.5 48.7 467 11-487 6-527 (560)
91 PRK08633 2-acyl-glycerophospho 100.0 2.1E-55 4.6E-60 486.8 47.2 447 26-487 614-1110(1146)
92 PRK13390 acyl-CoA synthetase; 100.0 4.1E-55 8.9E-60 442.3 45.1 433 35-487 5-473 (501)
93 KOG1175 Acyl-CoA synthetase [L 100.0 5.9E-56 1.3E-60 430.7 35.0 442 40-487 78-569 (626)
94 PRK07787 acyl-CoA synthetase; 100.0 9E-55 2E-59 436.0 44.0 405 37-488 10-441 (471)
95 PRK08974 long-chain-fatty-acid 100.0 7.6E-54 1.6E-58 438.7 51.2 454 26-487 22-522 (560)
96 PRK04813 D-alanine--poly(phosp 100.0 1.7E-54 3.8E-59 438.6 45.3 431 27-487 2-470 (503)
97 PRK07798 acyl-CoA synthetase; 100.0 6.1E-54 1.3E-58 437.9 48.4 446 27-487 3-499 (533)
98 PRK12582 acyl-CoA synthetase; 100.0 3.3E-55 7.2E-60 452.8 38.7 438 26-487 48-560 (624)
99 PLN02479 acetate-CoA ligase 100.0 5.2E-54 1.1E-58 439.8 46.7 453 26-487 19-526 (567)
100 PRK05691 peptide synthase; Val 100.0 1.1E-54 2.3E-59 521.8 46.7 432 26-488 1130-1596(4334)
101 PRK08162 acyl-CoA synthetase; 100.0 2.3E-53 5E-58 434.1 49.4 451 26-488 17-508 (545)
102 PRK13391 acyl-CoA synthetase; 100.0 1.8E-53 4E-58 431.2 46.5 437 34-488 4-477 (511)
103 PRK07445 O-succinylbenzoic aci 100.0 2.9E-54 6.4E-59 427.6 38.8 377 54-487 19-414 (452)
104 PRK12406 long-chain-fatty-acid 100.0 2.4E-53 5.2E-58 430.3 46.3 432 45-487 4-470 (509)
105 PRK05691 peptide synthase; Val 100.0 4.3E-54 9.4E-59 516.6 45.8 438 27-488 3720-4196(4334)
106 PF00501 AMP-binding: AMP-bind 100.0 1.9E-54 4.2E-59 427.6 31.1 378 33-428 1-417 (417)
107 PRK09192 acyl-CoA synthetase; 100.0 1.7E-53 3.6E-58 437.2 39.1 437 27-486 21-529 (579)
108 PRK06814 acylglycerophosphoeth 100.0 9.5E-53 2.1E-57 463.8 47.2 435 26-487 630-1099(1140)
109 PRK08276 long-chain-fatty-acid 100.0 1.8E-52 3.8E-57 423.4 44.8 417 52-487 9-463 (502)
110 PRK08308 acyl-CoA synthetase; 100.0 1.5E-52 3.2E-57 412.8 42.6 374 46-487 2-380 (414)
111 PLN03051 acyl-activating enzym 100.0 8.1E-53 1.7E-57 424.1 40.1 393 86-486 1-453 (499)
112 PRK09029 O-succinylbenzoic aci 100.0 1.5E-52 3.2E-57 418.7 41.1 394 28-487 3-420 (458)
113 KOG1179 Very long-chain acyl-C 100.0 4.2E-52 9.1E-57 386.4 39.3 453 25-488 75-581 (649)
114 PRK05850 acyl-CoA synthetase; 100.0 1.7E-52 3.7E-57 430.4 39.7 426 27-474 1-512 (578)
115 KOG1180 Acyl-CoA synthetase [L 100.0 3.2E-53 7E-58 392.1 30.1 438 24-470 38-587 (678)
116 PRK07768 long-chain-fatty-acid 100.0 1.7E-51 3.6E-56 420.2 41.4 433 28-484 3-505 (545)
117 TIGR01923 menE O-succinylbenzo 100.0 2.4E-50 5.2E-55 400.8 41.8 386 56-487 1-409 (436)
118 TIGR01733 AA-adenyl-dom amino 100.0 4.3E-50 9.4E-55 395.6 37.3 369 56-449 1-408 (408)
119 PTZ00297 pantothenate kinase; 100.0 4.8E-44 1E-48 383.4 40.3 416 27-468 427-905 (1452)
120 COG1020 EntF Non-ribosomal pep 100.0 5.7E-37 1.2E-41 319.1 39.0 386 27-442 227-642 (642)
121 PRK07824 O-succinylbenzoic aci 100.0 1E-36 2.3E-41 294.3 30.9 267 187-487 31-324 (358)
122 TIGR02372 4_coum_CoA_lig 4-cou 100.0 1.2E-34 2.7E-39 278.2 26.8 262 191-487 95-363 (386)
123 TIGR02155 PA_CoA_ligase phenyl 100.0 5.8E-34 1.3E-38 280.6 28.2 293 189-487 73-395 (422)
124 TIGR03335 F390_ftsA coenzyme F 100.0 4.1E-29 9E-34 246.2 28.0 284 188-484 83-399 (445)
125 KOG3628 Predicted AMP-binding 100.0 1.6E-27 3.6E-32 236.5 30.9 422 27-469 770-1298(1363)
126 TIGR03089 conserved hypothetic 100.0 6.8E-27 1.5E-31 208.1 22.8 220 33-284 2-227 (227)
127 COG1541 PaaK Coenzyme F390 syn 100.0 2.7E-26 5.9E-31 214.4 26.2 276 186-470 85-385 (438)
128 KOG1178 Non-ribosomal peptide 99.9 1.9E-24 4.2E-29 221.5 24.7 441 28-487 37-546 (1032)
129 TIGR02304 aden_form_hyp probab 99.7 3E-16 6.6E-21 151.3 22.7 245 193-468 101-378 (430)
130 KOG3628 Predicted AMP-binding 99.7 2.5E-15 5.4E-20 150.9 21.2 422 28-471 95-650 (1363)
131 PRK09188 serine/threonine prot 99.3 5.8E-12 1.3E-16 118.9 9.8 83 399-488 209-297 (365)
132 PF04443 LuxE: Acyl-protein sy 99.3 1.1E-10 2.4E-15 110.3 18.3 226 188-423 86-350 (365)
133 PF03321 GH3: GH3 auxin-respon 98.8 1E-08 2.2E-13 102.7 9.0 172 308-486 266-467 (528)
134 PLN02249 indole-3-acetic acid- 98.2 0.00023 5E-09 72.0 21.8 152 308-467 301-490 (597)
135 PF13193 AMP-binding_C: AMP-bi 98.2 1.9E-06 4.1E-11 61.7 4.7 50 433-488 1-50 (73)
136 PLN02620 indole-3-acetic acid- 98.2 0.00087 1.9E-08 67.2 23.5 129 307-439 302-468 (612)
137 PLN02247 indole-3-acetic acid- 98.2 0.0003 6.5E-09 70.6 20.0 130 307-440 291-463 (606)
138 COG1541 PaaK Coenzyme F390 syn 94.5 0.3 6.5E-06 47.3 9.8 88 53-141 108-197 (438)
139 PF14535 AMP-binding_C_2: AMP- 90.5 0.76 1.6E-05 34.5 5.4 42 429-471 1-46 (96)
140 TIGR03335 F390_ftsA coenzyme F 86.4 6.5 0.00014 39.2 10.5 81 53-136 104-186 (445)
141 TIGR02155 PA_CoA_ligase phenyl 86.0 6.3 0.00014 38.9 10.2 87 53-140 93-181 (422)
142 PRK07656 long-chain-fatty-acid 75.0 27 0.00057 35.4 10.6 85 53-141 184-270 (513)
143 PRK06187 long-chain-fatty-acid 74.5 35 0.00076 34.5 11.4 85 53-141 185-270 (521)
144 PRK02261 methylaspartate mutas 71.6 28 0.00061 28.1 7.8 94 244-345 15-120 (137)
145 TIGR03089 conserved hypothetic 70.7 34 0.00074 30.4 8.9 54 72-127 171-226 (227)
146 PRK08315 AMP-binding domain pr 68.2 50 0.0011 33.9 11.0 83 53-138 217-301 (559)
147 KOG1177 Long chain fatty acid 67.1 55 0.0012 32.4 9.7 85 52-141 251-339 (596)
148 COG0399 WecE Predicted pyridox 66.6 36 0.00077 32.8 8.5 65 64-132 59-128 (374)
149 PRK12583 acyl-CoA synthetase; 65.1 77 0.0017 32.4 11.6 83 53-138 219-303 (558)
150 PRK06334 long chain fatty acid 65.1 80 0.0017 32.4 11.6 98 40-140 181-287 (539)
151 TIGR02370 pyl_corrinoid methyl 65.1 66 0.0014 27.9 9.3 89 236-328 86-184 (197)
152 PLN03051 acyl-activating enzym 63.2 66 0.0014 32.5 10.5 85 53-140 137-222 (499)
153 TIGR01733 AA-adenyl-dom amino 62.1 99 0.0021 30.0 11.3 98 41-141 119-226 (408)
154 PF01041 DegT_DnrJ_EryC1: DegT 60.6 26 0.00055 33.8 6.6 89 29-133 26-120 (363)
155 TIGR03098 ligase_PEP_1 acyl-Co 60.2 1E+02 0.0022 31.1 11.4 85 53-141 179-264 (515)
156 PRK04319 acetyl-CoA synthetase 60.1 82 0.0018 32.5 10.7 86 53-141 223-310 (570)
157 PLN02565 cysteine synthase 60.1 78 0.0017 29.9 9.6 91 43-135 31-122 (322)
158 cd01445 TST_Repeats Thiosulfat 58.7 26 0.00057 28.3 5.4 43 65-107 81-126 (138)
159 PF00403 HMA: Heavy-metal-asso 58.1 51 0.0011 21.9 6.0 44 433-484 15-58 (62)
160 PF00501 AMP-binding: AMP-bind 56.9 58 0.0013 31.8 8.7 98 40-141 153-262 (417)
161 PF01037 AsnC_trans_reg: AsnC 56.5 34 0.00074 23.7 5.1 44 433-486 14-57 (74)
162 PLN02736 long-chain acyl-CoA s 55.3 2.2E+02 0.0048 30.0 13.1 101 210-317 78-180 (651)
163 TIGR01923 menE O-succinylbenzo 54.9 78 0.0017 31.1 9.2 83 53-141 129-212 (436)
164 PF09580 Spore_YhcN_YlaJ: Spor 54.7 35 0.00076 28.9 5.8 48 433-486 79-126 (177)
165 COG4009 Uncharacterized protei 54.0 71 0.0015 22.6 5.8 66 53-129 8-76 (88)
166 TIGR03590 PseG pseudaminic aci 53.8 1.5E+02 0.0032 27.4 10.1 76 52-134 9-88 (279)
167 PRK06164 acyl-CoA synthetase; 53.4 1.2E+02 0.0027 30.8 10.7 97 41-141 180-284 (540)
168 PRK03640 O-succinylbenzoic aci 53.1 1.2E+02 0.0027 30.2 10.5 85 53-141 159-244 (483)
169 TIGR02379 ECA_wecE TDP-4-keto- 51.7 78 0.0017 30.7 8.3 59 71-133 63-126 (376)
170 PLN02860 o-succinylbenzoate-Co 51.6 1.7E+02 0.0036 30.2 11.3 98 40-141 170-275 (563)
171 PTZ00342 acyl-CoA synthetase; 50.8 2.1E+02 0.0045 30.9 11.9 119 189-318 74-208 (746)
172 PRK06188 acyl-CoA synthetase; 50.7 1.7E+02 0.0037 29.6 11.2 84 53-140 186-269 (524)
173 PRK08316 acyl-CoA synthetase; 50.1 1.7E+02 0.0037 29.6 11.0 84 53-140 189-274 (523)
174 TIGR01139 cysK cysteine syntha 49.2 1.5E+02 0.0033 27.5 9.6 91 42-135 21-112 (298)
175 PRK11706 TDP-4-oxo-6-deoxy-D-g 48.6 1E+02 0.0022 29.9 8.6 58 72-133 64-126 (375)
176 TIGR01136 cysKM cysteine synth 48.5 2.3E+02 0.005 26.4 10.7 91 42-135 22-113 (299)
177 cd02069 methionine_synthase_B1 47.7 1.8E+02 0.0039 25.5 9.2 95 232-328 87-186 (213)
178 TIGR02262 benz_CoA_lig benzoat 47.3 1.8E+02 0.004 29.3 10.7 97 40-138 159-264 (508)
179 PRK08043 bifunctional acyl-[ac 46.9 1.9E+02 0.0041 30.9 11.1 94 40-136 363-465 (718)
180 COG0031 CysK Cysteine synthase 46.8 1.8E+02 0.0039 27.1 9.2 60 74-134 56-116 (300)
181 COG2236 Predicted phosphoribos 46.7 33 0.00072 29.5 4.2 33 53-85 5-37 (192)
182 PRK11761 cysM cysteine synthas 46.1 2.5E+02 0.0055 26.1 10.7 90 42-134 27-117 (296)
183 PLN02556 cysteine synthase/L-3 45.9 1.4E+02 0.003 28.9 8.9 62 73-134 103-165 (368)
184 PRK08308 acyl-CoA synthetase; 45.6 2.5E+02 0.0054 27.4 11.1 84 53-140 119-204 (414)
185 TIGR02898 spore_YhcN_YlaJ spor 45.4 53 0.0012 27.2 5.1 49 433-486 58-107 (158)
186 PLN03013 cysteine synthase 45.1 2.5E+02 0.0054 27.8 10.4 81 53-135 149-230 (429)
187 PRK11493 sseA 3-mercaptopyruva 45.0 33 0.00071 31.7 4.4 53 53-105 200-257 (281)
188 PRK05850 acyl-CoA synthetase; 44.7 3E+02 0.0066 28.3 12.0 85 209-297 34-124 (578)
189 KOG1176 Acyl-CoA synthetase [L 44.4 1.2E+02 0.0025 31.2 8.4 88 208-299 43-136 (537)
190 PRK08314 long-chain-fatty-acid 44.2 2.3E+02 0.0051 28.8 11.0 97 40-140 188-293 (546)
191 PRK07638 acyl-CoA synthetase; 44.1 2.5E+02 0.0054 28.1 11.1 85 53-141 161-246 (487)
192 PRK13295 cyclohexanecarboxylat 44.1 2.7E+02 0.0059 28.4 11.5 97 40-140 195-300 (547)
193 PRK05620 long-chain-fatty-acid 43.6 2.3E+02 0.0051 29.1 11.0 86 53-139 199-285 (576)
194 cd02070 corrinoid_protein_B12- 43.6 2.2E+02 0.0047 24.7 9.3 98 232-329 81-183 (201)
195 PRK09274 peptide synthase; Pro 43.0 2.4E+02 0.0051 28.9 10.9 99 190-290 20-121 (552)
196 cd01449 TST_Repeat_2 Thiosulfa 42.5 49 0.0011 25.5 4.5 41 65-105 64-104 (118)
197 PLN02387 long-chain-fatty-acid 42.3 2.9E+02 0.0062 29.5 11.5 103 209-318 105-209 (696)
198 PLN00011 cysteine synthase 41.1 2.2E+02 0.0049 26.8 9.4 90 43-135 33-124 (323)
199 PF07210 DUF1416: Protein of u 40.6 72 0.0016 23.0 4.4 42 366-417 17-58 (85)
200 PRK07470 acyl-CoA synthetase; 40.2 2.8E+02 0.0062 28.1 10.9 100 40-140 161-268 (528)
201 PRK07529 AMP-binding domain pr 40.1 2.7E+02 0.0059 29.2 10.8 100 40-142 211-324 (632)
202 PLN02246 4-coumarate--CoA liga 39.6 3.4E+02 0.0073 27.6 11.3 99 189-296 36-136 (537)
203 cd01519 RHOD_HSP67B2 Member of 39.6 65 0.0014 24.2 4.7 52 54-105 37-92 (106)
204 TIGR02372 4_coum_CoA_lig 4-cou 39.2 3.1E+02 0.0068 26.7 10.4 82 53-140 113-198 (386)
205 PLN03052 acetate--CoA ligase; 38.7 3.1E+02 0.0067 29.5 11.1 101 189-292 188-290 (728)
206 cd06448 L-Ser-dehyd Serine deh 38.4 3.1E+02 0.0068 25.8 9.9 91 42-135 16-106 (316)
207 KOG1179 Very long-chain acyl-C 38.2 1.3E+02 0.0028 30.6 7.2 84 53-140 260-345 (649)
208 PLN02550 threonine dehydratase 38.0 4.6E+02 0.01 27.3 11.5 90 42-136 124-213 (591)
209 PRK06839 acyl-CoA synthetase; 37.8 4.3E+02 0.0092 26.4 11.9 86 209-296 26-114 (496)
210 KOG0633 Histidinol phosphate a 37.2 59 0.0013 29.2 4.3 69 69-137 100-171 (375)
211 TIGR02275 DHB_AMP_lig 2,3-dihy 37.2 3.5E+02 0.0075 27.4 10.9 98 39-140 180-287 (527)
212 PRK08279 long-chain-acyl-CoA s 37.1 3.2E+02 0.0068 28.4 10.8 84 53-140 217-302 (600)
213 TIGR03588 PseC UDP-4-keto-6-de 37.0 2E+02 0.0044 27.8 8.8 65 65-132 55-127 (380)
214 PLN02574 4-coumarate--CoA liga 36.9 4.4E+02 0.0095 27.0 11.7 100 189-297 52-154 (560)
215 PLN02723 3-mercaptopyruvate su 36.5 57 0.0012 30.8 4.6 52 54-105 238-295 (320)
216 PRK05852 acyl-CoA synthetase; 36.4 4.7E+02 0.01 26.5 11.9 86 53-141 194-282 (534)
217 TIGR01138 cysM cysteine syntha 36.0 3.2E+02 0.0069 25.3 9.5 90 42-134 23-113 (290)
218 PF00818 Ice_nucleation: Ice n 35.9 18 0.00039 16.9 0.6 9 341-349 1-9 (16)
219 PRK10946 entE enterobactin syn 35.8 3.8E+02 0.0082 27.3 11.0 84 53-140 200-286 (536)
220 PRK11658 UDP-4-amino-4-deoxy-L 35.7 1.8E+02 0.004 28.1 8.2 62 66-131 60-126 (379)
221 PRK07008 long-chain-fatty-acid 35.5 2.6E+02 0.0056 28.6 9.7 86 53-140 194-281 (539)
222 PRK05677 long-chain-fatty-acid 35.2 3.7E+02 0.008 27.6 10.8 83 210-294 49-134 (562)
223 PF09269 DUF1967: Domain of un 34.8 42 0.0009 23.3 2.5 29 56-84 34-62 (69)
224 PF03808 Glyco_tran_WecB: Glyc 34.6 62 0.0013 27.3 4.1 77 259-342 4-81 (172)
225 PLN03102 acyl-activating enzym 34.4 2.7E+02 0.0058 28.8 9.7 84 210-295 39-124 (579)
226 PRK15407 lipopolysaccharide bi 34.0 2.1E+02 0.0045 28.5 8.3 55 75-133 107-166 (438)
227 PRK10717 cysteine synthase A; 34.0 2.9E+02 0.0064 26.1 9.1 91 42-135 28-119 (330)
228 PRK08633 2-acyl-glycerophospho 33.5 3.7E+02 0.008 30.6 11.3 99 39-140 779-886 (1146)
229 PRK07787 acyl-CoA synthetase; 33.2 5E+02 0.011 25.8 11.2 83 53-140 146-230 (471)
230 TIGR03595 Obg_CgtA_exten Obg f 33.1 53 0.0012 22.8 2.9 19 67-85 45-63 (69)
231 cd01561 CBS_like CBS_like: Thi 32.6 3.5E+02 0.0076 25.0 9.2 92 42-136 17-109 (291)
232 PRK09162 hypoxanthine-guanine 32.4 1.3E+02 0.0028 25.6 5.7 47 52-99 14-60 (181)
233 TIGR01734 D-ala-DACP-lig D-ala 32.1 5.2E+02 0.011 25.8 11.2 83 53-138 159-244 (502)
234 PRK08751 putative long-chain f 31.9 3E+02 0.0066 28.1 9.6 97 189-296 38-137 (560)
235 PRK00174 acetyl-CoA synthetase 31.8 4.3E+02 0.0093 27.7 10.8 98 189-291 80-179 (637)
236 COG0365 Acs Acyl-coenzyme A sy 31.7 2.8E+02 0.0061 28.4 8.8 83 209-294 39-124 (528)
237 KOG1138 Predicted cleavage and 31.5 76 0.0016 31.4 4.4 74 68-141 407-481 (653)
238 PRK05857 acyl-CoA synthetase; 31.4 4E+02 0.0088 27.1 10.3 95 189-292 27-123 (540)
239 cd07050 BMC_EutL_repeat2 ethan 31.0 85 0.0018 22.4 3.4 40 68-107 3-43 (87)
240 PRK07476 eutB threonine dehydr 31.0 3E+02 0.0065 26.0 8.5 53 84-136 71-123 (322)
241 KOG1250 Threonine/serine dehyd 30.9 1.8E+02 0.0038 28.2 6.6 53 84-136 118-170 (457)
242 PRK13388 acyl-CoA synthetase; 30.9 5.8E+02 0.012 26.0 11.4 95 40-138 148-251 (540)
243 PF06543 Lac_bphage_repr: Lact 30.3 39 0.00085 21.2 1.5 23 312-334 22-44 (49)
244 PRK07788 acyl-CoA synthetase; 30.2 2.2E+02 0.0048 29.1 8.2 85 53-141 225-310 (549)
245 PRK06381 threonine synthase; V 29.9 1.8E+02 0.0039 27.4 6.9 89 42-136 31-119 (319)
246 cd01448 TST_Repeat_1 Thiosulfa 29.9 1.7E+02 0.0037 22.6 5.8 40 66-105 66-106 (122)
247 PLN02614 long-chain acyl-CoA s 29.9 3.4E+02 0.0073 28.8 9.6 98 41-141 222-330 (666)
248 PRK10252 entF enterobactin syn 29.8 4.6E+02 0.01 30.4 11.4 98 40-140 596-703 (1296)
249 PRK10287 thiosulfate:cyanide s 29.8 1.8E+02 0.004 22.0 5.6 50 53-109 41-90 (104)
250 TIGR02188 Ac_CoA_lig_AcsA acet 29.8 4.2E+02 0.009 27.7 10.3 98 189-291 70-169 (625)
251 PRK10696 tRNA 2-thiocytidine b 29.8 4.3E+02 0.0092 24.0 9.8 78 56-133 4-94 (258)
252 PTZ00237 acetyl-CoA synthetase 29.4 2.7E+02 0.0059 29.3 8.8 80 209-290 91-172 (647)
253 PLN02356 phosphateglycerate ki 29.3 3.3E+02 0.0071 27.0 8.5 88 43-133 69-157 (423)
254 PRK10595 SOS cell division inh 29.2 2.1E+02 0.0046 23.9 6.2 65 68-132 70-140 (164)
255 PRK12476 putative fatty-acid-- 29.2 4.5E+02 0.0099 27.3 10.4 103 190-296 48-156 (612)
256 PRK06702 O-acetylhomoserine am 29.2 3.1E+02 0.0067 27.2 8.5 12 122-133 121-132 (432)
257 PRK13237 tyrosine phenol-lyase 29.0 3.8E+02 0.0082 26.8 8.9 69 53-126 76-174 (460)
258 TIGR01137 cysta_beta cystathio 28.9 3.8E+02 0.0082 26.7 9.3 90 42-134 26-116 (454)
259 KOG0025 Zn2+-binding dehydroge 28.6 1.7E+02 0.0036 27.1 5.8 64 75-138 157-221 (354)
260 PRK06814 acylglycerophosphoeth 28.5 5.4E+02 0.012 29.3 11.6 98 40-140 791-897 (1140)
261 TIGR03208 cyc_hxne_CoA_lg cycl 28.5 6.3E+02 0.014 25.6 11.2 98 39-140 192-298 (538)
262 PLN02430 long-chain-fatty-acid 28.5 6.8E+02 0.015 26.5 11.6 87 210-298 76-164 (660)
263 PF08479 POTRA_2: POTRA domain 27.8 92 0.002 21.9 3.5 25 52-76 28-52 (76)
264 cd00640 Trp-synth-beta_II Tryp 27.7 4.4E+02 0.0095 23.5 9.9 92 41-135 14-105 (244)
265 PLN02654 acetate-CoA ligase 27.6 3.1E+02 0.0067 29.1 8.8 81 209-291 119-201 (666)
266 cd03466 Nitrogenase_NifN_2 Nit 27.5 4.6E+02 0.01 26.0 9.5 56 78-134 299-358 (429)
267 COG0318 CaiC Acyl-CoA syntheta 27.4 6.3E+02 0.014 25.8 10.8 99 40-139 169-277 (534)
268 PLN02330 4-coumarate--CoA liga 27.1 5E+02 0.011 26.5 10.1 98 189-295 41-140 (546)
269 PRK07514 malonyl-CoA synthase; 26.6 4.6E+02 0.0099 26.3 9.7 86 209-296 27-114 (504)
270 PRK03584 acetoacetyl-CoA synth 26.6 3.4E+02 0.0073 28.6 8.9 85 53-140 281-369 (655)
271 COG1171 IlvA Threonine dehydra 26.5 4.9E+02 0.011 24.9 8.8 98 39-140 37-134 (347)
272 PRK02261 methylaspartate mutas 26.4 3.4E+02 0.0075 21.8 7.7 42 93-134 21-62 (137)
273 PRK08008 caiC putative crotono 26.3 6.8E+02 0.015 25.2 11.5 101 189-295 20-122 (517)
274 PRK07769 long-chain-fatty-acid 26.1 7.7E+02 0.017 25.7 12.6 85 210-296 55-143 (631)
275 TIGR02981 phageshock_pspE phag 26.1 2.3E+02 0.0049 21.3 5.5 50 53-109 39-88 (101)
276 TIGR02618 tyr_phenol_ly tyrosi 25.9 5.3E+02 0.011 25.8 9.2 69 53-126 69-167 (450)
277 PRK13383 acyl-CoA synthetase; 25.9 4.7E+02 0.01 26.4 9.7 83 210-296 60-146 (516)
278 PRK08162 acyl-CoA synthetase; 25.8 4E+02 0.0086 27.1 9.2 86 210-297 43-130 (545)
279 PRK09224 threonine dehydratase 25.8 4.2E+02 0.0091 27.0 8.9 91 42-137 35-125 (504)
280 PRK05605 long-chain-fatty-acid 25.7 5E+02 0.011 26.7 9.9 85 210-296 57-143 (573)
281 TIGR02316 propion_prpE propion 25.3 6.5E+02 0.014 26.3 10.8 97 189-290 65-163 (628)
282 PRK06155 crotonobetaine/carnit 25.2 5.9E+02 0.013 26.0 10.3 97 40-140 178-282 (542)
283 PRK06087 short chain acyl-CoA 25.2 7E+02 0.015 25.4 10.8 79 53-135 205-285 (547)
284 COG1167 ARO8 Transcriptional r 25.0 2.6E+02 0.0056 28.1 7.2 58 229-291 174-235 (459)
285 PF02680 DUF211: Uncharacteriz 24.9 2E+02 0.0044 21.4 4.7 59 423-484 10-69 (95)
286 PRK15400 lysine decarboxylase 24.8 5.5E+02 0.012 27.5 9.6 103 18-136 186-308 (714)
287 TIGR01217 ac_ac_CoA_syn acetoa 24.7 3.6E+02 0.0079 28.4 8.7 80 210-291 114-195 (652)
288 COG2885 OmpA Outer membrane pr 24.6 2.1E+02 0.0046 24.4 5.9 58 27-85 99-160 (190)
289 PLN02861 long-chain-fatty-acid 24.6 5.6E+02 0.012 27.0 10.1 86 210-297 77-164 (660)
290 TIGR03443 alpha_am_amid L-amin 24.5 5.3E+02 0.011 30.3 10.7 97 189-289 249-349 (1389)
291 smart00450 RHOD Rhodanese Homo 24.2 2.4E+02 0.0052 20.2 5.5 40 66-105 43-82 (100)
292 TIGR01501 MthylAspMutase methy 24.2 3.8E+02 0.0083 21.5 6.7 93 245-345 14-118 (134)
293 COG1022 FAA1 Long-chain acyl-C 24.0 6E+02 0.013 26.7 9.7 101 37-141 186-294 (613)
294 PF01276 OKR_DC_1: Orn/Lys/Arg 23.9 2.7E+02 0.006 27.4 6.9 104 17-136 56-179 (417)
295 PRK06382 threonine dehydratase 23.9 4.3E+02 0.0093 26.0 8.5 90 42-136 40-129 (406)
296 PRK09177 xanthine-guanine phos 23.8 2.6E+02 0.0056 23.1 5.9 41 53-95 8-48 (156)
297 PLN02238 hypoxanthine phosphor 23.7 2.1E+02 0.0045 24.6 5.5 22 53-74 10-31 (189)
298 PRK07867 acyl-CoA synthetase; 23.5 6.2E+02 0.013 25.7 10.0 85 210-296 28-115 (529)
299 TIGR01127 ilvA_1Cterm threonin 23.3 5.3E+02 0.012 24.9 9.0 89 42-135 15-103 (380)
300 PF00156 Pribosyltran: Phospho 23.1 2.3E+02 0.005 21.8 5.4 27 54-80 4-30 (125)
301 PF09312 SurA_N: SurA N-termin 22.8 1.7E+02 0.0037 22.8 4.4 32 42-75 2-33 (118)
302 COG1064 AdhP Zn-dependent alco 22.7 2.1E+02 0.0045 27.2 5.6 61 70-134 158-218 (339)
303 PF02729 OTCace_N: Aspartate/o 22.6 4.2E+02 0.0091 21.5 8.7 78 58-136 15-104 (142)
304 PF06564 YhjQ: YhjQ protein; 22.6 4.1E+02 0.0089 23.9 7.2 81 34-115 69-153 (243)
305 PRK07798 acyl-CoA synthetase; 22.3 8E+02 0.017 24.6 11.6 86 210-297 28-115 (533)
306 PF07994 NAD_binding_5: Myo-in 22.2 6.5E+02 0.014 23.5 9.3 70 56-127 127-226 (295)
307 KOG1252 Cystathionine beta-syn 22.1 5.5E+02 0.012 24.4 8.0 61 75-135 99-159 (362)
308 cd04618 CBS_pair_5 The CBS dom 22.0 3.3E+02 0.007 19.9 7.2 29 106-134 52-80 (98)
309 cd06404 PB1_aPKC PB1 domain is 21.9 1.1E+02 0.0024 22.1 2.8 36 52-87 17-58 (83)
310 PRK06060 acyl-CoA synthetase; 21.6 6.4E+02 0.014 26.9 9.9 87 53-141 163-251 (705)
311 PRK08276 long-chain-fatty-acid 21.6 6.9E+02 0.015 24.9 9.9 85 210-296 11-97 (502)
312 PF11142 DUF2917: Protein of u 21.4 2.7E+02 0.0059 18.8 4.7 28 392-419 25-58 (63)
313 TIGR01203 HGPRTase hypoxanthin 21.3 2.8E+02 0.006 23.2 5.7 20 55-74 3-22 (166)
314 KOG1794 N-Acetylglucosamine ki 21.3 2.9E+02 0.0063 25.6 5.9 81 308-393 68-150 (336)
315 PF08845 SymE_toxin: Toxin Sym 21.2 1.1E+02 0.0023 20.4 2.5 22 67-88 29-50 (57)
316 PRK12406 long-chain-fatty-acid 20.9 8.5E+02 0.018 24.4 10.8 68 72-140 189-257 (509)
317 TIGR01124 ilvA_2Cterm threonin 20.9 6E+02 0.013 25.9 8.9 90 42-136 32-121 (499)
318 PRK08813 threonine dehydratase 20.8 7.2E+02 0.016 23.8 9.0 81 52-137 58-138 (349)
319 PLN02723 3-mercaptopyruvate su 20.7 2.4E+02 0.0051 26.7 5.7 48 65-112 89-138 (320)
320 PRK06145 acyl-CoA synthetase; 20.5 8.5E+02 0.018 24.2 11.1 84 53-140 167-252 (497)
321 PF01436 NHL: NHL repeat; Int 20.4 1.3E+02 0.0028 16.3 2.4 18 409-426 9-26 (28)
322 PRK06178 acyl-CoA synthetase; 20.4 6.7E+02 0.014 25.7 9.6 86 210-297 58-145 (567)
323 PF01060 DUF290: Transthyretin 20.1 3.2E+02 0.007 19.4 5.1 46 366-426 7-52 (80)
No 1
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=1.9e-69 Score=527.36 Aligned_cols=445 Identities=41% Similarity=0.660 Sum_probs=379.4
Q ss_pred HhhccccCCCc-eEEEeCCC-CcceeHHHHHHHHHHHHHHHHHcC--CCCCCEEEEEcCCCcchHHHHHHHHHcCCeEee
Q 043601 33 LFRNSASYGSK-SALIDADS-GESLTFSQFKSIVIKVSHGFRHLG--VTKHDVVLIFAPNSIQFPICLLGVIAIGGIATT 108 (488)
Q Consensus 33 l~~~a~~~p~~-~a~~~~~~-~~~~Ty~el~~~~~~la~~L~~~g--~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~ 108 (488)
+.+.+..++++ +.+++... |+.+||+|++.++.++|.+|.++| +++||+|++++||++++.+++|||+.+|+++.+
T Consensus 22 l~~~~~~~~~~~~~~i~~~~~g~~~T~~e~~~~~~r~A~~L~~~~~~i~~gDvV~i~~pNs~~~~~~~la~~~~Ga~~~~ 101 (537)
T KOG1176|consen 22 LGRPAFVYLDRNTSLVYQDSDGRELTYSELHDRCRRLASALSELGLGIKKGDVVGILAPNTPEFVELALAVPMAGAVLNP 101 (537)
T ss_pred ccccccccccCcceEEEecCCCcEEcHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEEcCCCHHHHHHHHHHHHcCccccc
Confidence 33444444444 66666532 699999999999999999999875 899999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHhhcCCeEEEEccccHHHHhccC----CCeEEEcccCcccCCCCcCCCCccc-hHHHHhhcCCCCCC
Q 043601 109 ANPVYTVSELSKQVKDSSPKLVVTVPELWERVKDFN----IPAVLLGSNHIVSPRGLRSSSNIVY-FDELIELSGNASNF 183 (488)
Q Consensus 109 l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 183 (488)
++|.+...++...++.++++.+|++.+..+++.... ...+.+...... ........... +..+..... +..
T Consensus 102 ~Np~~~~~ei~~~~~~s~~kiif~d~~~~~~i~~~~~~~~~~i~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~--~~~ 177 (537)
T KOG1176|consen 102 LNPRLTASEIAKQLKDSKPKLIFVDEDFYDKISEATSKLALKIIVLTGDEGV--ISISDLVEDLDAFEDLMPEGL--PDG 177 (537)
T ss_pred cCcccCHHHHHHHHHhcCCeEEEEcCchHHHHHHHHhhcCCceEEEecccCc--cccccccccccchhhccccCC--Ccc
Confidence 999999999999999999999999999888875543 333333322000 00001111111 333333322 111
Q ss_pred CCCCCCCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHhhhhhhcCCCCcEEEEecchhhHHhHHHHHHHHhhCCceE
Q 043601 184 PDVSVKQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTAMDQELAGALDYVTLCVLPMFHVFGLSFVVYAQLQKGNCV 263 (488)
Q Consensus 184 ~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~ 263 (488)
......+|++.++|||||||.||||++||+++..+... ..........++.++.+|++|.+|+...+...+..|+++
T Consensus 178 -~~~~~~dd~~~il~SSGTTg~PKgV~lsHr~~~~~~~~--~~~~~~~~~~~v~l~~lPl~H~~Gl~~~~~~~~~~~~~i 254 (537)
T KOG1176|consen 178 -IRPVSEDDTAAILYSSGTTGLPKGVVLSHRNLIANTLS--IKIGWELTSDDVYLCTLPLFHIYGLITLLLSLLAGGTTI 254 (537)
T ss_pred -cccCCCCCeEEEecCCCCCCCCceEEEecHHHHHHHHH--hhhcccCCCCceEEEechHHHHhHHHHHHHHHHhCCceE
Confidence 45667899999999999999999999999999887332 333344566899999999999999966666688888888
Q ss_pred EEcCCCCHHHHHHHHHhcCccEEEecHHHHHHHHhcCCccCCCCCCCccEEEEccCCCcHHHHHHHHhhCCCCeEEeccC
Q 043601 264 VSMRKFDLETALRAIEKYRVTHWWVVPPIILALAKNVSLVKKFDLSSLKGIGSGAAPLRKELVEECSKNLPTVTVFQGYG 343 (488)
Q Consensus 264 ~~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~i~~~YG 343 (488)
+....+++..+++.++++++|+++++|..+..|++. +.....+++++|.+.+||+++++++.+++.+++|...+.+.||
T Consensus 255 i~~~~f~~~~~~~~i~kykvt~~~~vP~~~~~l~~~-p~~~~~~l~sl~~v~~gga~~~~~~~~~~~~~l~~~~v~q~YG 333 (537)
T KOG1176|consen 255 ICLRKFDAELFLDLIEKYKVTHLFLVPPVLNMLAKS-PIVKKYDLSSLRSVLSGGAPLSPATLEKVKERLPNVTVIQGYG 333 (537)
T ss_pred EECCCCCHHHHHHHHHHhCEEEEEcChHHHHHHhcC-CccCcccCCccEEEEecCCCCCHHHHHHHHHhCCCceEEEeec
Confidence 888889999999999999999999999999999997 5566789999999999999999999999999999899999999
Q ss_pred cccccccccccCCCCCCCCCCceeecCCCceEEEEeCCCCCCCCCCCcceEEEecC---------------------Ccc
Q 043601 344 MTETCGVVTVENPLLGVQNSGSTGTLVAGVEAQIVCVDTLKPLPPNQVGELWVRGP---------------------ILM 402 (488)
Q Consensus 344 ~tE~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~---------------------~~~ 402 (488)
+||+|+.++.+...+. .+.+++|++++++...+.+ ++|+.++.++.||||++|+ |++
T Consensus 334 mTE~~~~~~~~~~~~e-~k~~svG~~~~g~~~~v~~-e~g~~l~~~~~GEI~vrg~~imkGY~~NpeaT~~~~~~~GW~~ 411 (537)
T KOG1176|consen 334 MTEAGGLITSNDWGPE-RKPGSVGRLLPGVRVKVLD-ETGVSLGPNQTGEICVRGPQVMKGYLKNPEATKEAFDDDGWFH 411 (537)
T ss_pred cccccCceeecCCCcc-CcccccCccccceEEEeeC-CCCCCCCCCCceEEEEECcccchhhcCChHHHHhhcccCCccc
Confidence 9999988887776543 6899999999988888877 8999999999999999985 899
Q ss_pred ccceEEEccCCcEEEEcccCcceeeCcEEe---eHhHHHhcCCCeeeeEEEeecCCCCCceEEEEEEeCCCCCCCHHHHH
Q 043601 403 PGDLGYFDEHGQLFIVDRIKELIKCNGFQV---ELEGVLVSHPEILDAVVIPFPDPEAGEVPIAYVVRSPNSSLTKEDVQ 479 (488)
Q Consensus 403 tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v---~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~ 479 (488)
|||+|++|+||+|++.+|++|+||.+|++| |||++|.+||.|.||+||+.+++.+||.++|+|+.+++...++++|+
T Consensus 412 TGDiGy~D~DG~l~IvdR~KdlIk~~G~qv~P~EiE~vL~~hP~V~eaaVvgipDe~~Ge~p~A~VV~k~g~~lte~di~ 491 (537)
T KOG1176|consen 412 TGDLGYFDEDGYLYIVDRSKDLIKYGGEQVSPAEIEAVLLTHPDVLEAAVVGIPDEVWGETPAAFVVLKKGSTLTEKDII 491 (537)
T ss_pred cCceEEEcCCCeEEEecchhhheeeCCEEeCHHHHHHHHHhCCCccEEEEEcccccccCCcceEEEEecCCCcCCHHHHH
Confidence 999999999999999999999999999999 99999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcC
Q 043601 480 KFVANDSQ 487 (488)
Q Consensus 480 ~~~~~~l~ 487 (488)
+|++++|+
T Consensus 492 ~~v~k~l~ 499 (537)
T KOG1176|consen 492 EYVRKKLP 499 (537)
T ss_pred HHHHhhCC
Confidence 99999987
No 2
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=100.00 E-value=9.5e-69 Score=519.54 Aligned_cols=436 Identities=28% Similarity=0.425 Sum_probs=367.7
Q ss_pred CCHHHH-Hhhccc-cCCCceEEEeCCC---CcceeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCCcchHHHHHHHH
Q 043601 27 LSMVHF-LFRNSA-SYGSKSALIDADS---GESLTFSQFKSIVIKVSHGFRH-LGVTKHDVVLIFAPNSIQFPICLLGVI 100 (488)
Q Consensus 27 ~~l~~~-l~~~a~-~~p~~~a~~~~~~---~~~~Ty~el~~~~~~la~~L~~-~g~~~g~~V~i~~~n~~~~~~~~lA~~ 100 (488)
+|+... +.++.. ..++++|++..++ .+.+||+||++.++++|+.|++ .|+ +||+|++++||.++.++++|||+
T Consensus 8 lN~~~n~~dr~~~~~~~~~~aii~~~e~~~~~~~Ty~~L~~~v~r~A~~L~~~~gv-kGDrV~iymp~~pe~~~a~LA~~ 86 (528)
T COG0365 8 LNLALNALDRHLEADRPDDTAIIFDGEDGLFRELTYGDLRREVARLANALKDLGGV-KGDRVAIYMPNSPEAVIALLATA 86 (528)
T ss_pred eechhhhhhhhhhccCCCceEEEEEcCCCCceEEEHHHHHHHHHHHHHHHHHhCCC-CCCEEEEEcCCCHHHHHHHHHHH
Confidence 444333 555554 3478999987632 2789999999999999999987 567 99999999999999999999999
Q ss_pred HcCCeEeecCCCCCHHHHHHHHhhcCCeEEEEccccHHHHhccCCC---------eEEEcccCcccCCCCcCCCCccchH
Q 043601 101 AIGGIATTANPVYTVSELSKQVKDSSPKLVVTVPELWERVKDFNIP---------AVLLGSNHIVSPRGLRSSSNIVYFD 171 (488)
Q Consensus 101 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (488)
++|++.+|+.+.++++.+..++++++++++|+++....+.+....+ .++.... . ..+.
T Consensus 87 riGAI~~~vf~~f~~~al~~Ri~d~~~k~vit~d~~~~~gk~~~~~~~~~~~~~~~iv~~r~------------~-~~~~ 153 (528)
T COG0365 87 RIGAIPAVVSPGLSAEAVADRIADLGPKVLIADDGTFRNGKEIALLEDADAVLSSVVVVPRL------------G-LWYD 153 (528)
T ss_pred HcCCEEeecccCCCHHHHHHHHHccCCCEEEEecccccccccccchhHHHHhhcceEEeccc------------c-ccHH
Confidence 9999999999999999999999999999999998776655433221 1111111 1 5667
Q ss_pred HHHhhcCCCCCCCCCCCCCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHhhhhhhcCCCCcEEEEecchhhHHhHHH
Q 043601 172 ELIELSGNASNFPDVSVKQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTAMDQELAGALDYVTLCVLPMFHVFGLSF 251 (488)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (488)
+...... ........+.+|+++++|||||||.||+|+|+|..++...... ....+...++|++++..++.|+.|.++
T Consensus 154 ~~~~~~~--~~~~~~~~~~~dpl~ilYTSGTTG~PKgv~H~~gg~l~~~~~~-~~~~~~~~~~Dv~w~~ad~GW~~g~~~ 230 (528)
T COG0365 154 EAVEKAS--EKFEFEPLPADDPLFLLYTSGTTGKPKGIVHSHGGYLVEHRLT-AKFHGDLLPGDRFWNSSDPGWIYGLWY 230 (528)
T ss_pred HHhhccC--CCCCccccCCCCeEEEEeCCCCCCCCceEEEeCchHHHHHHHH-HHHhhCCCCCCEEEeCCCchhhhCchH
Confidence 7665544 3444555899999999999999999999999999877664332 334455669999999999999999988
Q ss_pred HHHHHhhCCceEEEcCC--C-CHHHHHHHHHhcCccEEEecHHHHHHHHhcCCccCCCCCCCccEEEEccCCCcHHHHHH
Q 043601 252 VVYAQLQKGNCVVSMRK--F-DLETALRAIEKYRVTHWWVVPPIILALAKNVSLVKKFDLSSLKGIGSGAAPLRKELVEE 328 (488)
Q Consensus 252 ~~~~~l~~G~~~~~~~~--~-~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~ 328 (488)
.++.+|..|++.++.+. + ++..+++.++++++|.+++.|+.++.|.+. ......++++||.+.+.||||+++.+++
T Consensus 231 ~v~~pL~~Gat~~~~eg~p~~~~~~~~~~ie~~~vt~~~tsPT~~R~l~~~-g~~~~~dlssLr~~~SaGEPLnpe~~~w 309 (528)
T COG0365 231 SVFSPLASGATTVLYDGRPFYSPERLWEALEKYKVTIFGTSPTFLRRLMKL-GLGEPYDLSSLRVLGSAGEPLNPEAFEW 309 (528)
T ss_pred HHHHHHhcCCeEEEeCCCCCCCHHHHHHHHHHhCCceEeeCHHHHHHHHhc-CCcccccchhheeeeccCCCCCHHHHHH
Confidence 89999999999998854 2 489999999999999999999999999988 4467789999999999999999999999
Q ss_pred HHhhCCCCeEEeccCcccccccccccCCCCCCCCCCceeecCCCceEEEEeCCCCCCCCCCCcceEEEecC---------
Q 043601 329 CSKNLPTVTVFQGYGMTETCGVVTVENPLLGVQNSGSTGTLVAGVEAQIVCVDTLKPLPPNQVGELWVRGP--------- 399 (488)
Q Consensus 329 ~~~~~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~--------- 399 (488)
+.+.++ +.+.+.||+||+|.......+ ..+.++.|+|+||+++.++|++ |++++.|+ |+|+++.+
T Consensus 310 ~~~~~g-~~i~d~~gqTEtg~~~~~~~~---~~~~g~~g~p~pG~~~~vvdd~-g~~~~~~~-G~Lvi~~~~p~~~~~~w 383 (528)
T COG0365 310 FYSALG-VWILDIYGQTETGMGFIAGRP---PVKNGSSGLPLPGYAVRRVDDE-GNPVPPGV-GELVVRLPWPGMALTYW 383 (528)
T ss_pred HHHHhC-CCEeccccccccCccccCCCC---CcCCCCCCCCCCCceeEEECCC-CCcCCCCc-eEEEEeCCCchhhhhhh
Confidence 999998 999999999999955554433 3455666999999999999955 99999999 99999975
Q ss_pred -------------CccccceEEEccCCcEEEEcccCcceeeCcEEe---eHhHHHhcCCCeeeeEEEeecCCCCCceEEE
Q 043601 400 -------------ILMPGDLGYFDEHGQLFIVDRIKELIKCNGFQV---ELEGVLVSHPEILDAVVIPFPDPEAGEVPIA 463 (488)
Q Consensus 400 -------------~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v---~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~ 463 (488)
+|.|||.+++|+||+++|.||.||+||+.|++| |||++|.+||.|.||+|++.+++..|+.+++
T Consensus 384 ~d~er~~~~y~~~~y~tGD~~~~DedGy~~i~GR~DDvI~vsG~Rig~~EvE~~l~~hP~VaEaAvVg~pd~~kg~~v~a 463 (528)
T COG0365 384 NDPERYKEAYFGRWYRTGDWAERDEDGYFWLHGRSDDVIKVSGKRIGPLEIESVLLAHPAVAEAAVVGVPDPGKGQIVLA 463 (528)
T ss_pred CCHHHHHHHHhhceeecCceeEEccCCCEEEEeeccceEeccCeeccHHHHHHHHHhCcceeeeEEEeccCCCCCcEEEE
Confidence 688999999999999999999999999999999 9999999999999999999999999999999
Q ss_pred EEEeCCCCCCC--HHHHHHHHHhhc
Q 043601 464 YVVRSPNSSLT--KEDVQKFVANDS 486 (488)
Q Consensus 464 ~v~~~~~~~~~--~~~i~~~~~~~l 486 (488)
||+++++...+ .++|++++++++
T Consensus 464 fVvL~~g~~~~~L~~ei~~~vr~~~ 488 (528)
T COG0365 464 FVVLAAGVEPNELAEEIRRHVARNI 488 (528)
T ss_pred EEEecCCCChHHHHHHHHHHHHhcc
Confidence 99999987555 344555554443
No 3
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=100.00 E-value=3.5e-68 Score=483.36 Aligned_cols=451 Identities=27% Similarity=0.373 Sum_probs=392.6
Q ss_pred CCCHHHHHhhccccCCCceEEEeCCCCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHHcCCe
Q 043601 26 NLSMVHFLFRNSASYGSKSALIDADSGESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQFPICLLGVIAIGGI 105 (488)
Q Consensus 26 ~~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~ 105 (488)
+.|+++.++..+++-||+.|++....+.++||+|+...+..+|..|...|+++||+|++..||+.+|+..+|||.++|.+
T Consensus 49 ~~Tigq~l~~~t~~v~dkea~Vf~~eg~R~Tf~~~~~ev~slAaGll~lGL~kGDrVgvwgpN~~~w~l~~lA~A~AG~v 128 (596)
T KOG1177|consen 49 SETIGQLLETTTERVPDKEAAVFDHEGIRLTFSEFVSEVESLAAGLLSLGLKKGDRVGVWGPNSYEWVLCQLACARAGLV 128 (596)
T ss_pred cccHHHHHHHHhhccCcceEEEEeeccchhhHHHHHHHHHHHHhhHHhhcCCCCCEEEEecCChHHHHHHHHHHHHhceE
Confidence 47999999999999999999998777888999999999999999999999999999999999999999999999999999
Q ss_pred EeecCCCCCHHHHHHHHhhcCCeEEEEcccc-----HHHHhcc-------C-----------CCeEEEcccCcccCCCCc
Q 043601 106 ATTANPVYTVSELSKQVKDSSPKLVVTVPEL-----WERVKDF-------N-----------IPAVLLGSNHIVSPRGLR 162 (488)
Q Consensus 106 ~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~-----~~~~~~~-------~-----------~~~~~~~~~~~~~~~~~~ 162 (488)
.+++||.+...+++..+++.+++++|..+.+ .+.+.+. . ...+++..+ ..
T Consensus 129 ~v~~NP~Yq~~elr~~L~k~~~k~l~~p~~~k~~ny~~~l~~icPEv~~~~~G~lkS~~lp~lthvi~~~e-------d~ 201 (596)
T KOG1177|consen 129 LVNLNPAYQSEELRYVLKKVGCKALFAPPQFKTQNYYETLLEICPEVMRGDPGQLKSELLPELTHVILADE-------DH 201 (596)
T ss_pred EeccCcccccHHHHHHHhhcCeEEEEccchhhhchHHHHHHHhhHHhhcCCCccccccccccceEEEecCC-------CC
Confidence 9999999999999999999999999987542 2222221 0 112222221 13
Q ss_pred CCCCccchHHHHhhcCCCCC----CCCCCCCCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHhhhhhhcCCCCcEEE
Q 043601 163 SSSNIVYFDELIELSGNASN----FPDVSVKQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTAMDQELAGALDYVTL 238 (488)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~ 238 (488)
...+...+++++.....+.. .......+++++.|.|||||||.||++.+||-++++++.. .....+..++.+++
T Consensus 202 ~~~Ga~~~sev~~~~s~~~~a~l~~~~k~~~pdd~~niQFTSGTTG~PKgatLsH~~~~Nna~~--vg~r~g~~e~~~i~ 279 (596)
T KOG1177|consen 202 PLPGAFLLSEVLKAASKEERAKLADMSKWLSPDDAVNIQFTSGTTGAPKGATLSHYNFLNNARA--VGARAGYNEKHRIC 279 (596)
T ss_pred cCCCceehHHHHHhcchHHHHHHHhhhhhcCCCCceEEEeccCCCCCCcceeeehhhhhhhHHH--HHHHhCcCcceEEE
Confidence 45566677887766553211 1233456899999999999999999999999999999554 55566677788999
Q ss_pred EecchhhHHhHHHHHHHHhhCCceEEEcC-CCCHHHHHHHHHhcCccEEEecHHHHHHHHhcCCccCCCCCCCccEEEEc
Q 043601 239 CVLPMFHVFGLSFVVYAQLQKGNCVVSMR-KFDLETALRAIEKYRVTHWWVVPPIILALAKNVSLVKKFDLSSLKGIGSG 317 (488)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~v~~~ 317 (488)
+..|++|.+|+....++++..|++++++. .+++.+.+++|+++++|.++++|+++..+++. +.....+++++|..+.|
T Consensus 280 ~~~Pl~H~~G~~~~~ma~l~~gat~Vfp~~~f~~k~alqai~~ekcT~l~gtPtM~~Dlln~-~~~~~~~~s~lr~~vig 358 (596)
T KOG1177|consen 280 IPNPLYHCFGCVLGVMAALMHGATIVFPAPSFDPKDALQAISNEKCTTLYGTPTMFVDLLNI-PQKQQVDLSSLRKGVIG 358 (596)
T ss_pred ecCchHHHHHHHHHHHHHHHhCcEEEeeCCCCChHHHHHHHHhhceEEEecChHHHHHHhcc-hhhccCchhhhhhheeC
Confidence 99999999998899999999999999974 59999999999999999999999999999987 88888999999999999
Q ss_pred cCCCcHHHHHHHHhhCCCCeEEeccCcccccccccccCCC-CCCCCCCceeecCCCceEEEEeCCCCCCCCCCCcceEEE
Q 043601 318 AAPLRKELVEECSKNLPTVTVFQGYGMTETCGVVTVENPL-LGVQNSGSTGTLVAGVEAQIVCVDTLKPLPPNQVGELWV 396 (488)
Q Consensus 318 G~~l~~~~~~~~~~~~~~~~i~~~YG~tE~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~~i~d~~~~~~~~~g~~Gel~v 396 (488)
|+++|+++.+.+.+...-..+...||+||++++.+..... +......++|+.+++.+..++| +.|..++.|..|||++
T Consensus 359 Ga~~s~eLlk~iv~~~~m~~i~v~YG~TEts~v~~~~~~~D~~~~~~ksVG~~m~h~Ea~iv~-~~g~~v~~~~~Gel~i 437 (596)
T KOG1177|consen 359 GAPVSPELLKLIVNQMNMKDIAVAYGLTETSPVLFMSLLGDPPEERIKSVGHLMDHYEAAIVD-KDGSEVPLGTKGELLI 437 (596)
T ss_pred CCCCCHHHHHHHHHhhCceeeEEEeeccccCcceeeecCCCCHHHHHhhhhhccccccccccc-CCCCccccCCCceEEE
Confidence 9999999999999965534567789999999877665433 2345667899999999999999 7999999999999999
Q ss_pred ecC---------------------CccccceEEEccCCcEEEEcccCcceeeCcEEe---eHhHHHhcCCCeeeeEEEee
Q 043601 397 RGP---------------------ILMPGDLGYFDEHGQLFIVDRIKELIKCNGFQV---ELEGVLVSHPEILDAVVIPF 452 (488)
Q Consensus 397 ~g~---------------------~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v---~ie~~l~~~~~v~~~~v~~~ 452 (488)
+|. ||.|||++.+|++|.++++||++|+|+.+|++| +||+.|.+||.|.++.|+++
T Consensus 438 RGY~tMl~Ywg~~~kT~eti~~drW~~TGDi~~m~enG~i~iVGRskdmI~rGGENVyP~ElE~fL~~hp~V~~a~VVGV 517 (596)
T KOG1177|consen 438 RGYSTMLGYWGEEEKTKETIGNDRWYDTGDIAVMDENGTIEIVGRSKDMIIRGGENVYPTELEDFLNKHPLVKEAHVVGV 517 (596)
T ss_pred EechhheeecCCcccchhhcccccceecCceEEEcCCCcEEEEEcccCeEEeCCcccChHHHHHHHhhCCCeeeEEEEcc
Confidence 985 899999999999999999999999999999999 99999999999999999999
Q ss_pred cCCCCCceEEEEEEeCCCCC--CCHHHHHHHHHhhcC
Q 043601 453 PDPEAGEVPIAYVVRSPNSS--LTKEDVQKFVANDSQ 487 (488)
Q Consensus 453 ~~~~~~~~~~~~v~~~~~~~--~~~~~i~~~~~~~l~ 487 (488)
+++..||.++|+|.++++.+ .+.++|+++|+.+|.
T Consensus 518 ~D~R~GE~VCA~vRLqe~~e~~~t~E~lKa~Ck~kla 554 (596)
T KOG1177|consen 518 PDERLGEEVCACVRLQEGAEGKTTAETLKAMCKGKLA 554 (596)
T ss_pred CCCcccceEEEEEEeeccccccccHHHHHHHHhcccc
Confidence 99999999999999998765 599999999999864
No 4
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.9e-65 Score=517.34 Aligned_cols=448 Identities=36% Similarity=0.559 Sum_probs=378.5
Q ss_pred CCCCHHHHHhhccccCCCceEEEeCCCCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHHcCC
Q 043601 25 PNLSMVHFLFRNSASYGSKSALIDADSGESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQFPICLLGVIAIGG 104 (488)
Q Consensus 25 ~~~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~ 104 (488)
...++.+.+.++++.+|+++|+++.+...++||+||+++++++|+.|++.|+++||+|+|+++|++++++++|||+++|+
T Consensus 9 ~~~~~~~~l~~~a~~~~~~~a~~~~~~~~~~Ty~el~~~~~~~A~~L~~~~v~~gdrVail~~N~~e~~~~~~a~~~~Ga 88 (534)
T COG0318 9 AELTLASLLERAARRNPDRPALIFLGRGGRLTYRELDRRANRLAAALQALGVKPGDRVAILLPNSPEFLIAFLAALRAGA 88 (534)
T ss_pred ccccHHHHHHHHHHhCCCceEEEEcCCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhcCE
Confidence 44899999999999999999999873223499999999999999999999999999999999999999999999999999
Q ss_pred eEeecCCCCCHHHHHHHHhhcCCeEEEEccccHHHHhccCC--C---eEEEcccCcccCCCCcCCCCc--cchHHHHhhc
Q 043601 105 IATTANPVYTVSELSKQVKDSSPKLVVTVPELWERVKDFNI--P---AVLLGSNHIVSPRGLRSSSNI--VYFDELIELS 177 (488)
Q Consensus 105 ~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~--~---~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 177 (488)
+++|++|.+...++.++++.++++.++++.+.......... . .+..... .... ..+++.....
T Consensus 89 v~vpln~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~ 158 (534)
T COG0318 89 VAVPLNPRLTPRELAYILNDAGAKVLITSAEFAALLEAVAEALPVVLVVLLVGD----------ADDRLPITLEALAAEG 158 (534)
T ss_pred EEeecCcccCHHHHHHHHHhcCCeEEEEcccchhHHHHHhccCCcceEEEeccc----------ccccccccHHHHhhcc
Confidence 99999999999999999999999999999874333332211 1 1111111 0000 2445553322
Q ss_pred CCCCCCCCCCCCCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHhhhhhhc--CCCCcEEEEecchhhHHhHHHHHHH
Q 043601 178 GNASNFPDVSVKQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTAMDQELA--GALDYVTLCVLPMFHVFGLSFVVYA 255 (488)
Q Consensus 178 ~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (488)
.. ........+++++++++|||||||.||+|++||+++..+ .......+. ..+.+++++.+|++|.+|+...++.
T Consensus 159 ~~-~~~~~~~~~~~d~a~i~yTSGTTG~PKgv~~th~~~~~~--~~~~~~~~~~~~~~~d~~l~~lPl~H~~Gl~~~~~~ 235 (534)
T COG0318 159 PG-PDADARPVDPDDLAFLLYTSGTTGLPKGVVLTHRNLLAN--AAGIAAALGGGLTPDDVVLSWLPLFHIFGLIVGLLA 235 (534)
T ss_pred CC-cccccCCCCCCCEEEEEeCCCCCCCCCEeEEecHhHHHH--HHHHHHHhcccCCCCceEEEecChHHHHHHHHHHHH
Confidence 11 111122267899999999999999999999999999987 333555566 7888999999999999999777888
Q ss_pred HhhCCceEEEcC--CCCHHHHHHHHHhcCccEEEecHHHHHHHHhcCCccCCCCCCC-ccEEEEccCCCcHHHHHHHHhh
Q 043601 256 QLQKGNCVVSMR--KFDLETALRAIEKYRVTHWWVVPPIILALAKNVSLVKKFDLSS-LKGIGSGAAPLRKELVEECSKN 332 (488)
Q Consensus 256 ~l~~G~~~~~~~--~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~-lr~v~~~G~~l~~~~~~~~~~~ 332 (488)
++..|+++++.+ .+++..++..+.+.++|++.++|+++..++.. ......++.+ ||.+++||+++++++.++|.+.
T Consensus 236 ~~~~G~~~v~~~~~~f~~~~~~~~i~~~~~t~~~~vPt~~~~ll~~-~~~~~~~~~~~lr~~~~gg~~~~~~~~~~~~~~ 314 (534)
T COG0318 236 PLLGGGTLVLLSPEPFDPEEVLWLIEKYKVTVLSGVPTFLRELLDN-PEKDDDDLSSSLRLVLSGGAPLPPELLERFEER 314 (534)
T ss_pred HHHcCCEEEeCCCCCcCHHHHHHHHHHhcceEEecchHHHHHHHhC-CccCccccccceEEEEecCCcCCHHHHHHHHHH
Confidence 899999999998 58999999999999999999999999999887 4444555555 9999999999999999999999
Q ss_pred CCCCeEEeccCcccccccccccCCCCCCCCCCceeecCCCceEEEEeCCCCCCCCCCCcceEEEecC-------------
Q 043601 333 LPTVTVFQGYGMTETCGVVTVENPLLGVQNSGSTGTLVAGVEAQIVCVDTLKPLPPNQVGELWVRGP------------- 399 (488)
Q Consensus 333 ~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~------------- 399 (488)
|+...+...||+||+++.++.+.........+++|+|+|+++++|+|++++++++ |++|||+++|+
T Consensus 315 ~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~pg~~v~Ivd~~~~~~~p-g~vGei~irgp~v~~GY~~~pe~t 393 (534)
T COG0318 315 FGPIAILEGYGLTETSPVVTINPPDDLLAKPGSVGRPLPGVEVRIVDPDGGEVLP-GEVGEIWVRGPNVMKGYWNRPEAT 393 (534)
T ss_pred hCCCceEEeecccccCceeecCCCchhhhcCCcccccCCCcEEEEEeCCCCccCC-CCceEEEEECchhhhhhcCChHHH
Confidence 9856899999999999877766554201356778999999999999977776666 99999999975
Q ss_pred --------CccccceEEEccCCcEEEEcccCcceeeCcEEe---eHhHHHhcCCCeeeeEEEeecCCCCCceEEEEEEeC
Q 043601 400 --------ILMPGDLGYFDEHGQLFIVDRIKELIKCNGFQV---ELEGVLVSHPEILDAVVIPFPDPEAGEVPIAYVVRS 468 (488)
Q Consensus 400 --------~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v---~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~ 468 (488)
|++|||+|++|++|+++|.||.+|+|+.+|++| +||.++.+||.|.+++|++.+++.+||.++|+|+.+
T Consensus 394 ~~~f~~~gW~~TGDlg~~d~~G~l~i~gR~kd~I~~gG~ni~p~eiE~~l~~~~~V~~aavvgvpd~~~Ge~~~a~v~~~ 473 (534)
T COG0318 394 AEAFDEDGWLRTGDLGYVDEDGYLYIVGRLKDLIISGGENIYPEEIEAVLAEHPAVAEAAVVGVPDERWGERVVAVVVLK 473 (534)
T ss_pred HHhhccCCeeeecceEEEcCCccEEEEeccceEEEeCCeEECHHHHHHHHHhCCCcceEEEEeCCCCccCceEEEEEEEc
Confidence 689999999999999999999999999999999 999999999999999999999999999999999999
Q ss_pred CC--CCCCHHHHHHHHHhhcC
Q 043601 469 PN--SSLTKEDVQKFVANDSQ 487 (488)
Q Consensus 469 ~~--~~~~~~~i~~~~~~~l~ 487 (488)
++ ...+.++|+++++++++
T Consensus 474 ~~~~~~~~~~~i~~~~~~~l~ 494 (534)
T COG0318 474 PGGDAELTAEELRAFLRKRLA 494 (534)
T ss_pred CCCCCCCCHHHHHHHHHhhhh
Confidence 87 45689999999998775
No 5
>PRK07788 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3.5e-64 Score=513.79 Aligned_cols=443 Identities=26% Similarity=0.345 Sum_probs=377.6
Q ss_pred CCHHHHHhhccccCCCceEEEeCCCCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHHcCCeE
Q 043601 27 LSMVHFLFRNSASYGSKSALIDADSGESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQFPICLLGVIAIGGIA 106 (488)
Q Consensus 27 ~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~ 106 (488)
.++.+++.++++.+|+++|+++. ++.+||+||+++++++|++|.+.|+++|++|+++++|++++++++|||+++|+++
T Consensus 49 ~~~~~~~~~~a~~~pd~~Al~~~--~~~~Ty~el~~~~~~la~~L~~~gi~~gd~V~i~~~n~~~~~~~~la~~~~G~~~ 126 (549)
T PRK07788 49 GPFAGLVAHAARRAPDRAALIDE--RGTLTYAELDEQSNALARGLLALGVRAGDGVAVLARNHRGFVLALYAAGKVGARI 126 (549)
T ss_pred chHHHHHHHHHHHCCCceEEEEC--CCceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcCCEE
Confidence 38999999999999999999987 6899999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCHHHHHHHHhhcCCeEEEEccccHHHHhccCC-----CeEEEcccCcccCCCCcCCCCccchHHHHhhcCCCC
Q 043601 107 TTANPVYTVSELSKQVKDSSPKLVVTVPELWERVKDFNI-----PAVLLGSNHIVSPRGLRSSSNIVYFDELIELSGNAS 181 (488)
Q Consensus 107 v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (488)
+|+++.++.+++..+++.++++++|++++....+..... ..+....... .........++++......
T Consensus 127 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~-- 199 (549)
T PRK07788 127 ILLNTGFSGPQLAEVAAREGVKALVYDDEFTDLLSALPPDLGRLRAWGGNPDDD-----EPSGSTDETLDDLIAGSST-- 199 (549)
T ss_pred EEeCCCCCHHHHHHHHHhcCCcEEEECchhHHHHHhhccccccceEEEEecCcc-----ccCCcCcccHHHHhcCCCC--
Confidence 999999999999999999999999999887766544311 1111111100 0112344566666543221
Q ss_pred CCCCCCCCCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHhhhhhhcCCCCcEEEEecchhhHHhHHHHHHHHhhCCc
Q 043601 182 NFPDVSVKQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTAMDQELAGALDYVTLCVLPMFHVFGLSFVVYAQLQKGN 261 (488)
Q Consensus 182 ~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~ 261 (488)
. ......++.++++|||||||.||+|+++|.++... .......+....+++++...|++|.+++ ..++.++..|+
T Consensus 200 ~--~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~~~~~--~~~~~~~~~~~~~d~~~~~~p~~~~~g~-~~~~~~l~~G~ 274 (549)
T PRK07788 200 A--PLPKPPKPGGIVILTSGTTGTPKGAPRPEPSPLAP--LAGLLSRVPFRAGETTLLPAPMFHATGW-AHLTLAMALGS 274 (549)
T ss_pred C--CCCCCCCCCcEEEECCCCCCCCCEEeccCccHHHH--HHHHHhhCCCCcCCeEEEccchHHHHHH-HHHHHHHHhCC
Confidence 1 11234567899999999999999999999999876 3334445567788999999999999998 56677899999
Q ss_pred eEEEcCCCCHHHHHHHHHhcCccEEEecHHHHHHHHhcCCcc--CCCCCCCccEEEEccCCCcHHHHHHHHhhCCCCeEE
Q 043601 262 CVVSMRKFDLETALRAIEKYRVTHWWVVPPIILALAKNVSLV--KKFDLSSLKGIGSGAAPLRKELVEECSKNLPTVTVF 339 (488)
Q Consensus 262 ~~~~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~--~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~i~ 339 (488)
++++...+++..+++.++++++|+++++|+++..+++. ... ...++++||.+++||+++++++.++|.+.|+ ..++
T Consensus 275 ~~v~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~-~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~-~~l~ 352 (549)
T PRK07788 275 TVVLRRRFDPEATLEDIAKHKATALVVVPVMLSRILDL-GPEVLAKYDTSSLKIIFVSGSALSPELATRALEAFG-PVLY 352 (549)
T ss_pred EEEECCCCCHHHHHHHHHHhCCcEEEEHHHHHHHHHhC-cccccCCCCCCceeEEEEeCCCCCHHHHHHHHHHhC-ccce
Confidence 99999889999999999999999999999999999886 332 4556889999999999999999999999997 7899
Q ss_pred eccCcccccccccccCCCCCCCCCCceeecCCCceEEEEeCCCCCCCCCCCcceEEEecC-----------------Ccc
Q 043601 340 QGYGMTETCGVVTVENPLLGVQNSGSTGTLVAGVEAQIVCVDTLKPLPPNQVGELWVRGP-----------------ILM 402 (488)
Q Consensus 340 ~~YG~tE~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~-----------------~~~ 402 (488)
+.||+||++....... .......+++|+|++++.++++| +++++++.|+.|||+++|+ |++
T Consensus 353 ~~YG~TE~~~~~~~~~-~~~~~~~~~vG~~~~~~~~~i~d-~~~~~~~~g~~Gel~v~g~~~~~gY~~~~~~~~~~g~~~ 430 (549)
T PRK07788 353 NLYGSTEVAFATIATP-EDLAEAPGTVGRPPKGVTVKILD-ENGNEVPRGVVGRIFVGNGFPFEGYTDGRDKQIIDGLLS 430 (549)
T ss_pred eccCcchhchhhccCh-hhhhhcCCCcccCCCCcEEEEEC-CCcCCCCCCCeEEEEEeCCCccccccCCCcccccCCcee
Confidence 9999999985544332 22234567899999999999999 6899999999999999986 678
Q ss_pred ccceEEEccCCcEEEEcccCcceeeCcEEe---eHhHHHhcCCCeeeeEEEeecCCCCCceEEEEEEeCCCCCCCHHHHH
Q 043601 403 PGDLGYFDEHGQLFIVDRIKELIKCNGFQV---ELEGVLVSHPEILDAVVIPFPDPEAGEVPIAYVVRSPNSSLTKEDVQ 479 (488)
Q Consensus 403 tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v---~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~ 479 (488)
|||+|++++||.+++.||+||+||++|++| +||+++.++|.|.+++|++.+++..++.++++|+++++...+.++++
T Consensus 431 TGDl~~~~~~g~l~~~GR~dd~i~~~G~~v~p~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~vv~~~~~~~~~~~l~ 510 (549)
T PRK07788 431 SGDVGYFDEDGLLFVDGRDDDMIVSGGENVFPAEVEDLLAGHPDVVEAAVIGVDDEEFGQRLRAFVVKAPGAALDEDAIK 510 (549)
T ss_pred cCceEEEcCCCCEEEeccCcceEEECCEEECHHHHHHHHHhCCCeeEEEEECCcCcccccEEEEEEEeCCCCCCCHHHHH
Confidence 999999999999999999999999999999 99999999999999999999998889999999999988788999999
Q ss_pred HHHHhhcC
Q 043601 480 KFVANDSQ 487 (488)
Q Consensus 480 ~~~~~~l~ 487 (488)
++++++|+
T Consensus 511 ~~~~~~l~ 518 (549)
T PRK07788 511 DYVRDNLA 518 (549)
T ss_pred HHHHHhhh
Confidence 99999886
No 6
>PLN02574 4-coumarate--CoA ligase-like
Probab=100.00 E-value=3.4e-63 Score=506.91 Aligned_cols=473 Identities=42% Similarity=0.688 Sum_probs=388.4
Q ss_pred ceeeecCCCCCCCCCCCCCCHHHHHhhccccCCCceEEEeCCCCcceeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcC
Q 043601 9 DGIYRSLRPALVLPQDPNLSMVHFLFRNSASYGSKSALIDADSGESLTFSQFKSIVIKVSHGFRH-LGVTKHDVVLIFAP 87 (488)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~-~g~~~g~~V~i~~~ 87 (488)
..++.+..|+...|..|++++.+.+... +.+|+++|+++...+..+||+||+++++++|++|++ .|+++||+|+++++
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~~~G~~~gd~V~i~~~ 100 (560)
T PLN02574 22 TGIYSSKHPPVPLPSDPNLDAVSFIFSH-HNHNGDTALIDSSTGFSISYSELQPLVKSMAAGLYHVMGVRQGDVVLLLLP 100 (560)
T ss_pred CeeecCCCCCCCCCCCCCCCHHHHHhcC-cccCCCCEEEECCCCCcccHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECC
Confidence 3556665566666676777777776665 679999999987555689999999999999999998 99999999999999
Q ss_pred CCcchHHHHHHHHHcCCeEeecCCCCCHHHHHHHHhhcCCeEEEEccccHHHHhccCCCeEEEcccCcccCCCCcCCCCc
Q 043601 88 NSIQFPICLLGVIAIGGIATTANPVYTVSELSKQVKDSSPKLVVTVPELWERVKDFNIPAVLLGSNHIVSPRGLRSSSNI 167 (488)
Q Consensus 88 n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (488)
|++++++++|||+++|++++|++|.++.+++.++++.++++.++++.+....+.......+.+....... ......
T Consensus 101 n~~~~~~~~la~~~~G~v~v~l~p~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 176 (560)
T PLN02574 101 NSVYFPVIFLAVLSLGGIVTTMNPSSSLGEIKKRVVDCSVGLAFTSPENVEKLSPLGVPVIGVPENYDFD----SKRIEF 176 (560)
T ss_pred CcchHHHHHHHHHHhCeEEeCcCcccCHHHHHHHHHhcCCEEEEECHHHHHHHHhcCCcEEecCcccccc----cCccCc
Confidence 9999999999999999999999999999999999999999999999887776655444433322111100 001122
Q ss_pred cchHHHHhhcCCCCCCCCCCCCCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHhhh--hhh-cCCCCcEEEEecchh
Q 043601 168 VYFDELIELSGNASNFPDVSVKQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTAMD--QEL-AGALDYVTLCVLPMF 244 (488)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~ 244 (488)
..+++++.... .........++++++++|||||||.||+|++||.++.......... ... .....++++..+|++
T Consensus 177 ~~~~~~~~~~~--~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~ 254 (560)
T PLN02574 177 PKFYELIKEDF--DFVPKPVIKQDDVAAIMYSSGTTGASKGVVLTHRNLIAMVELFVRFEASQYEYPGSDNVYLAALPMF 254 (560)
T ss_pred ccHHHHhhcCC--cccccCCCCcCCEEEEEcCCCccCCCcEEEEeHHHHHHHHHHHHhccccccccCCCCcEEEEecchH
Confidence 34555443322 1222234567899999999999999999999999988763221110 011 123567889999999
Q ss_pred hHHhHHHHHHHHhhCCceEEEcCCCCHHHHHHHHHhcCccEEEecHHHHHHHHhcCCccCCCCCCCccEEEEccCCCcHH
Q 043601 245 HVFGLSFVVYAQLQKGNCVVSMRKFDLETALRAIEKYRVTHWWVVPPIILALAKNVSLVKKFDLSSLKGIGSGAAPLRKE 324 (488)
Q Consensus 245 ~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~v~~~G~~l~~~ 324 (488)
|.+++...++.++..|+++++.+++++..+++.++++++|.+.++|+++..+++........+++++|.+++||++++++
T Consensus 255 h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~lr~~~~gg~~l~~~ 334 (560)
T PLN02574 255 HIYGLSLFVVGLLSLGSTIVVMRRFDASDMVKVIDRFKVTHFPVVPPILMALTKKAKGVCGEVLKSLKQVSCGAAPLSGK 334 (560)
T ss_pred HHHHHHHHHHHHHhcCCEEEEecCCCHHHHHHHHHHcCCeEEecCCHHHHHHHhCccccccCccccceEEEEecccCCHH
Confidence 99999777788889999999998899999999999999999999999999998862222346788999999999999999
Q ss_pred HHHHHHhhCCCCeEEeccCcccccccccccCCCCCCCCCCceeecCCCceEEEEeCCCCCCCCCCCcceEEEecC-----
Q 043601 325 LVEECSKNLPTVTVFQGYGMTETCGVVTVENPLLGVQNSGSTGTLVAGVEAQIVCVDTLKPLPPNQVGELWVRGP----- 399 (488)
Q Consensus 325 ~~~~~~~~~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~----- 399 (488)
+.+.+.+.++++.+++.||+||++.+.+...........+++|+|.+++.++|+|++++++++.|+.|||+|+|+
T Consensus 335 ~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~vG~~~~~~~v~i~d~~~g~~~~~g~~Gei~v~g~~~~~G 414 (560)
T PLN02574 335 FIQDFVQTLPHVDFIQGYGMTESTAVGTRGFNTEKLSKYSSVGLLAPNMQAKVVDWSTGCLLPPGNCGELWIQGPGVMKG 414 (560)
T ss_pred HHHHHHHHCCCCcEEecccccccCceeecCCCccccCCCCceeeeCCCcEEEEEeCCCCcCCCCCCCeEEEEECcchhhh
Confidence 999999999779999999999998655433222223456789999999999999988899999999999999974
Q ss_pred ----------------CccccceEEEccCCcEEEEcccCcceeeCcEEe---eHhHHHhcCCCeeeeEEEeecCCCCCce
Q 043601 400 ----------------ILMPGDLGYFDEHGQLFIVDRIKELIKCNGFQV---ELEGVLVSHPEILDAVVIPFPDPEAGEV 460 (488)
Q Consensus 400 ----------------~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v---~ie~~l~~~~~v~~~~v~~~~~~~~~~~ 460 (488)
|++|||+|+++++|++++.||++|+||++|++| +||.++.+||.|.+++|++.+++..++.
T Consensus 415 Y~~~~~~t~~~~~~~g~~~TGDlg~~~~~G~l~i~GR~~d~i~~~G~~v~~~eiE~~l~~~~~V~~~~v~~~~~~~~g~~ 494 (560)
T PLN02574 415 YLNNPKATQSTIDKDGWLRTGDIAYFDEDGYLYIVDRLKEIIKYKGFQIAPADLEAVLISHPEIIDAAVTAVPDKECGEI 494 (560)
T ss_pred hcCChhHhhhhccCCCCcccceEEEEECCCeEEEEecchhheEECCEEECHHHHHHHHHhCCCcceEEEEccccCCCCcc
Confidence 689999999999999999999999999999999 9999999999999999999999888899
Q ss_pred EEEEEEeCCCCCCCHHHHHHHHHhhcCC
Q 043601 461 PIAYVVRSPNSSLTKEDVQKFVANDSQL 488 (488)
Q Consensus 461 ~~~~v~~~~~~~~~~~~i~~~~~~~l~~ 488 (488)
++++|+.+++...+.++++++++++|+.
T Consensus 495 ~~a~v~~~~~~~~~~~~l~~~~~~~l~~ 522 (560)
T PLN02574 495 PVAFVVRRQGSTLSQEAVINYVAKQVAP 522 (560)
T ss_pred eEEEEEeCCCCCCCHHHHHHHHHHhccC
Confidence 9999999887778889999999998763
No 7
>PLN02654 acetate-CoA ligase
Probab=100.00 E-value=1.5e-62 Score=509.18 Aligned_cols=458 Identities=22% Similarity=0.329 Sum_probs=365.7
Q ss_pred CCCHHH-HHhhccc-cCCCceEEEeCC----CCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHH
Q 043601 26 NLSMVH-FLFRNSA-SYGSKSALIDAD----SGESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQFPICLLGV 99 (488)
Q Consensus 26 ~~~l~~-~l~~~a~-~~p~~~a~~~~~----~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~ 99 (488)
.+|+.. +|.++++ .+|+++|+++.. .++++||+||.++++++|++|++.|+++||+|++++||++++++++|||
T Consensus 86 ~~N~~~~~l~~~~~~~~~~~~Al~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~pn~~e~v~a~lA~ 165 (666)
T PLN02654 86 KTNICYNCLDRNVEAGNGDKIAIYWEGNEPGFDASLTYSELLDRVCQLANYLKDVGVKKGDAVVIYLPMLMELPIAMLAC 165 (666)
T ss_pred EeeHHHHHHHHhhccCCCCCEEEEEEcCCCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHH
Confidence 466744 5666665 589999998632 1368999999999999999999999999999999999999999999999
Q ss_pred HHcCCeEeecCCCCCHHHHHHHHhhcCCeEEEEccccHHHHhcc------------------CCCeEEE-cccCcccCCC
Q 043601 100 IAIGGIATTANPVYTVSELSKQVKDSSPKLVVTVPELWERVKDF------------------NIPAVLL-GSNHIVSPRG 160 (488)
Q Consensus 100 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~------------------~~~~~~~-~~~~~~~~~~ 160 (488)
+++|++++|+++.++.+++..++++++++++|+++......+.. ....+.. ..........
T Consensus 166 ~~~Gav~vpv~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (666)
T PLN02654 166 ARIGAVHSVVFAGFSAESLAQRIVDCKPKVVITCNAVKRGPKTINLKDIVDAALDESAKNGVSVGICLTYENQLAMKRED 245 (666)
T ss_pred HHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCccccCCcccchHHHHHHHHHhccccCCCccEEEEecccccccccc
Confidence 99999999999999999999999999999999987643221100 0001111 1000000000
Q ss_pred Cc-CCCCccchHHHHhhcCCCCCCCCCCCCCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHhhhhhhcCCCCcEEEE
Q 043601 161 LR-SSSNIVYFDELIELSGNASNFPDVSVKQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTAMDQELAGALDYVTLC 239 (488)
Q Consensus 161 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~ 239 (488)
.. .......++++..... ..........+++++|+|||||||.||||+++|.+++... .......+...++|++++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~d~~~ilyTSGTTG~PKgVv~sh~~~~~~~-~~~~~~~~~~~~~d~~~~ 322 (666)
T PLN02654 246 TKWQEGRDVWWQDVVPNYP--TKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVYT-ATTFKYAFDYKPTDVYWC 322 (666)
T ss_pred cccccCCcccHHHHhhcCC--CCCCceecCCCCceEEEecCCCCCCCceEEecccHHHHHH-HHHHHHhcCCCCCcEEEE
Confidence 00 0001122444432211 1122334578999999999999999999999999876432 122334456788999999
Q ss_pred ecchhhHHhHHHHHHHHhhCCceEEEcCC----CCHHHHHHHHHhcCccEEEecHHHHHHHHhcCC-ccCCCCCCCccEE
Q 043601 240 VLPMFHVFGLSFVVYAQLQKGNCVVSMRK----FDLETALRAIEKYRVTHWWVVPPIILALAKNVS-LVKKFDLSSLKGI 314 (488)
Q Consensus 240 ~~~~~~~~~~~~~~~~~l~~G~~~~~~~~----~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~-~~~~~~l~~lr~v 314 (488)
..|++|+.+..+.++.+|..|+++++.++ .++..+++.|+++++|+++++|+++..|.+... .....++++||.+
T Consensus 323 ~~~~~~~~g~~~~~~~~L~~G~tvvl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~Lr~i 402 (666)
T PLN02654 323 TADCGWITGHSYVTYGPMLNGATVLVFEGAPNYPDSGRCWDIVDKYKVTIFYTAPTLVRSLMRDGDEYVTRHSRKSLRVL 402 (666)
T ss_pred cCCchhhhhhHHHHHHHHHcCceEEEECCCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhhCccccccCChhheeEE
Confidence 99999999987888899999999998864 478999999999999999999999999988622 1234578899999
Q ss_pred EEccCCCcHHHHHHHHhhCCC--CeEEeccCcccccccccccCCCCCCCCCCceeecCCCceEEEEeCCCCCCCCCCCcc
Q 043601 315 GSGAAPLRKELVEECSKNLPT--VTVFQGYGMTETCGVVTVENPLLGVQNSGSTGTLVAGVEAQIVCVDTLKPLPPNQVG 392 (488)
Q Consensus 315 ~~~G~~l~~~~~~~~~~~~~~--~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d~~~~~~~~~g~~G 392 (488)
+++||++++++++++.+.++. +.+.+.||+||+|+......+.....+.+++|+|++|+.++|+| ++|++++.++.|
T Consensus 403 ~~~Ge~l~~~~~~~~~~~~g~~~~~i~~~yg~TE~g~~~~~~~~~~~~~~~gs~G~p~~g~~v~i~d-~~g~~~~~~~~G 481 (666)
T PLN02654 403 GSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVD-EKGKEIEGECSG 481 (666)
T ss_pred EEecCCCCHHHHHHHHHHhCCCCCceeccccccccCCeeeccCCCCCCCCCCccCCCCCCceEEEEC-CCCCCCCCCCce
Confidence 999999999999999999873 68999999999987665443322245678899999999999999 688999988899
Q ss_pred eEEEecC-------------------------CccccceEEEccCCcEEEEcccCcceeeCcEEe---eHhHHHhcCCCe
Q 043601 393 ELWVRGP-------------------------ILMPGDLGYFDEHGQLFIVDRIKELIKCNGFQV---ELEGVLVSHPEI 444 (488)
Q Consensus 393 el~v~g~-------------------------~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v---~ie~~l~~~~~v 444 (488)
||+++++ |++|||+|++|+||++++.||+||+||++|++| +||+++.+||.|
T Consensus 482 el~v~~~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGD~~~~d~dG~l~i~GR~dd~I~~~G~ri~p~EIE~~l~~~p~V 561 (666)
T PLN02654 482 YLCVKKSWPGAFRTLYGDHERYETTYFKPFAGYYFSGDGCSRDKDGYYWLTGRVDDVINVSGHRIGTAEVESALVSHPQC 561 (666)
T ss_pred EEEEcCCCchhhhhhcCChHHHHHhhhhcCCCEEEeCceEEECCCCcEEEeeeccCeEEeCCEEECHHHHHHHHHhCCCe
Confidence 9999873 478899999999999999999999999999999 999999999999
Q ss_pred eeeEEEeecCCCCCceEEEEEEeCCCCCCCH---HHHHHHHHhhcC
Q 043601 445 LDAVVIPFPDPEAGEVPIAYVVRSPNSSLTK---EDVQKFVANDSQ 487 (488)
Q Consensus 445 ~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~---~~i~~~~~~~l~ 487 (488)
.+++|++.+++..++.++++|+++++...+. ++|+++++++|+
T Consensus 562 ~eaaVvg~~d~~~ge~~~a~Vvl~~~~~~~~~l~~~l~~~~~~~L~ 607 (666)
T PLN02654 562 AEAAVVGIEHEVKGQGIYAFVTLVEGVPYSEELRKSLILTVRNQIG 607 (666)
T ss_pred eeEEEEeeEcCCCCeEEEEEEEECCCCCCCHHHHHHHHHHHHHhCC
Confidence 9999999999999999999999998765554 378888888875
No 8
>PRK07529 AMP-binding domain protein; Validated
Probab=100.00 E-value=6.2e-62 Score=502.90 Aligned_cols=457 Identities=28% Similarity=0.402 Sum_probs=373.3
Q ss_pred CCCCCHHHHHhhccccCCCceEEEeC------CCCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHH
Q 043601 24 DPNLSMVHFLFRNSASYGSKSALIDA------DSGESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQFPICLL 97 (488)
Q Consensus 24 ~~~~~l~~~l~~~a~~~p~~~a~~~~------~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~l 97 (488)
..+.|+.++|.++++++|+++|+++. +.++++||+||.++++++|+.|++.|+++||+|+++++|++++++++|
T Consensus 22 ~~~~t~~~~l~~~a~~~p~~~Al~~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gi~~gd~V~i~~~n~~e~~~~~l 101 (632)
T PRK07529 22 DLPASTYELLSRAAARHPDAPALSFLLDADPLDRPETWTYAELLADVTRTANLLHSLGVGPGDVVAFLLPNLPETHFALW 101 (632)
T ss_pred cCCCCHHHHHHHHHHHCCCCceEEeecccCCCCCCceeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHH
Confidence 34468999999999999999999863 124799999999999999999999999999999999999999999999
Q ss_pred HHHHcCCeEeecCCCCCHHHHHHHHhhcCCeEEEEccccH-----HHHhc----c-CCCeE-EEcccCcccCC-C-----
Q 043601 98 GVIAIGGIATTANPVYTVSELSKQVKDSSPKLVVTVPELW-----ERVKD----F-NIPAV-LLGSNHIVSPR-G----- 160 (488)
Q Consensus 98 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~-----~~~~~----~-~~~~~-~~~~~~~~~~~-~----- 160 (488)
||+++| +++|+++.++.+++..+++.++++++|++.... .++.. . ..+.+ .+......... .
T Consensus 102 A~~~~G-i~~pi~~~~~~~~i~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 180 (632)
T PRK07529 102 GGEAAG-IANPINPLLEPEQIAELLRAAGAKVLVTLGPFPGTDIWQKVAEVLAALPELRTVVEVDLARYLPGPKRLAVPL 180 (632)
T ss_pred HHHHhC-EEEeCCCcCCHHHHHHHHHhcCCcEEEEeCCCCCchHHHHHHHHHhcCCcceeEEEecCcccccccccccccc
Confidence 999999 579999999999999999999999999985432 22211 1 11222 22111100000 0
Q ss_pred --CcCCCCccchHHHHhhcCCCCCCCCCCCCCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHhhhhhhcCCCCcEEE
Q 043601 161 --LRSSSNIVYFDELIELSGNASNFPDVSVKQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTAMDQELAGALDYVTL 238 (488)
Q Consensus 161 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~ 238 (488)
......+.++.+.+...............++++++++|||||||.||+|.+||.++..++. .....+...++++++
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~--~~~~~~~~~~~d~~l 258 (632)
T PRK07529 181 IRRKAHARILDFDAELARQPGDRLFSGRPIGPDDVAAYFHTGGTTGMPKLAQHTHGNEVANAW--LGALLLGLGPGDTVF 258 (632)
T ss_pred cccccccccCCHHHHHhcCCCccccccCCCCcCceEEEEECCCccCcCCEEEEcHHHHHHHHH--HHHHhcCCCCCCEEE
Confidence 0012234456655544322111222344679999999999999999999999999987743 244455568899999
Q ss_pred EecchhhHHhHHHHHHHHhhCCceEEEcCCC------CHHHHHHHHHhcCccEEEecHHHHHHHHhcCCccCCCCCCCcc
Q 043601 239 CVLPMFHVFGLSFVVYAQLQKGNCVVSMRKF------DLETALRAIEKYRVTHWWVVPPIILALAKNVSLVKKFDLSSLK 312 (488)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~l~~G~~~~~~~~~------~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr 312 (488)
+.+|++|..++...++.++..|+++++.++. ....+++.++++++|++.++|+++..+++. . ....++++||
T Consensus 259 ~~~pl~h~~~~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~-~-~~~~~~~slr 336 (632)
T PRK07529 259 CGLPLFHVNALLVTGLAPLARGAHVVLATPQGYRGPGVIANFWKIVERYRINFLSGVPTVYAALLQV-P-VDGHDISSLR 336 (632)
T ss_pred EecCchhhhHHHHHHHHHHHCCCEEEecCccccCcchHHHHHHHHHHHhCCeEEEeHHHHHHHHHhC-c-ccCCCccceE
Confidence 9999999999878889999999999998642 136889999999999999999999999876 2 2345789999
Q ss_pred EEEEccCCCcHHHHHHHHhhCCCCeEEeccCcccccccccccCCCCCCCCCCceeecCCCceEEEEeC-CCC---CCCCC
Q 043601 313 GIGSGAAPLRKELVEECSKNLPTVTVFQGYGMTETCGVVTVENPLLGVQNSGSTGTLVAGVEAQIVCV-DTL---KPLPP 388 (488)
Q Consensus 313 ~v~~~G~~l~~~~~~~~~~~~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d~-~~~---~~~~~ 388 (488)
.+++||+++++++.++|.+.++ +++++.||+||++.++..+.. ......+++|+|+|++.+++++. +++ ++++.
T Consensus 337 ~v~~gg~~l~~~l~~~~~~~~g-~~l~~~YG~TE~~~~~~~~~~-~~~~~~~svG~~~p~~~v~i~~~d~~g~~~~~~~~ 414 (632)
T PRK07529 337 YALCGAAPLPVEVFRRFEAATG-VRIVEGYGLTEATCVSSVNPP-DGERRIGSVGLRLPYQRVRVVILDDAGRYLRDCAV 414 (632)
T ss_pred EEEEcCCCCCHHHHHHHHHHhC-CcEeeeecccccCcccccCCc-cccccCCCcccccCCceEEEEEcCCCCcccccCCC
Confidence 9999999999999999999986 999999999999876655432 22346789999999999998642 345 78999
Q ss_pred CCcceEEEecC--------------------CccccceEEEccCCcEEEEcccCcceeeCcEEe---eHhHHHhcCCCee
Q 043601 389 NQVGELWVRGP--------------------ILMPGDLGYFDEHGQLFIVDRIKELIKCNGFQV---ELEGVLVSHPEIL 445 (488)
Q Consensus 389 g~~Gel~v~g~--------------------~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v---~ie~~l~~~~~v~ 445 (488)
|+.|||+|+|+ |++|||+|++++||++++.||+||+||.+|++| +||+++.+||.|.
T Consensus 415 g~~Gel~v~gp~v~~GY~~~~~~~~~~~~~gw~~TGDlg~~d~dG~l~i~GR~~d~i~~~G~~i~p~eIE~~l~~~p~V~ 494 (632)
T PRK07529 415 DEVGVLCIAGPNVFSGYLEAAHNKGLWLEDGWLNTGDLGRIDADGYFWLTGRAKDLIIRGGHNIDPAAIEEALLRHPAVA 494 (632)
T ss_pred CCceEEEEECCCccccccCCccccccccCCCceEcCcEEEEcCCceEEEEecccCEEEeCCEEECHHHHHHHHHhCCCee
Confidence 99999999985 678999999999999999999999999999999 9999999999999
Q ss_pred eeEEEeecCCCCCceEEEEEEeCCCCCCCHHHHHHHHHhhcC
Q 043601 446 DAVVIPFPDPEAGEVPIAYVVRSPNSSLTKEDVQKFVANDSQ 487 (488)
Q Consensus 446 ~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~~~~~~l~ 487 (488)
+++|++.+++..++.++++|+++++...+.++++++++++|+
T Consensus 495 ~a~vvg~~d~~~ge~~~a~v~l~~~~~~~~~~l~~~~~~~l~ 536 (632)
T PRK07529 495 LAAAVGRPDAHAGELPVAYVQLKPGASATEAELLAFARDHIA 536 (632)
T ss_pred EEEEEeccCCCCCceeEEEEEEcCCCCCCHHHHHHHHHHhcc
Confidence 999999999889999999999999888899999999998874
No 9
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=100.00 E-value=4e-62 Score=504.72 Aligned_cols=455 Identities=25% Similarity=0.321 Sum_probs=364.9
Q ss_pred CCHH-HHHhhccccCCCceEEEeCC----CCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHH
Q 043601 27 LSMV-HFLFRNSASYGSKSALIDAD----SGESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQFPICLLGVIA 101 (488)
Q Consensus 27 ~~l~-~~l~~~a~~~p~~~a~~~~~----~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~ 101 (488)
+|+. ++|.+++..+|+++|+++.+ .++++||+||+++++++|++|+++|+++||+|+++++|++++++++|||++
T Consensus 51 ~n~~~~~l~~~~~~~p~~~Al~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~Gd~V~i~~~n~~e~v~~~lA~~~ 130 (628)
T TIGR02316 51 TNLCHNALDRHLDERGEQLALVTVSSETGQERTLTYRQLHREVNVFASALRALGVGRGDRVLIYMPMIAEAVFAMLACAR 130 (628)
T ss_pred eeHHHHHHHHHhCcCCCCeEEEEEcCCCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHH
Confidence 5565 56777888899999998631 237899999999999999999999999999999999999999999999999
Q ss_pred cCCeEeecCCCCCHHHHHHHHhhcCCeEEEEccccH---------HHHh----cc--CCC-eEEEcccCcccCCCCcCCC
Q 043601 102 IGGIATTANPVYTVSELSKQVKDSSPKLVVTVPELW---------ERVK----DF--NIP-AVLLGSNHIVSPRGLRSSS 165 (488)
Q Consensus 102 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~---------~~~~----~~--~~~-~~~~~~~~~~~~~~~~~~~ 165 (488)
+|++++|+++.++.+++..++++++++++|+++... ..+. .. ... .+.+..... ... ....
T Consensus 131 ~Gav~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~--~~~-~~~~ 207 (628)
T TIGR02316 131 IGAIHSVVFGGFASHSLALRIDDATPKLIVSADAGMRGGKVIPYKPLLDAAIAEAQHPPPHVLLVDRGLA--PMR-LIPG 207 (628)
T ss_pred hCCEEEecCCCCCHHHHHHHHHhcCceEEEECCccccCCcccccHHHHHHHHHhcCCCCCEEEEEeCCCC--CcC-cccC
Confidence 999999999999999999999999999999986431 1111 11 112 222221100 000 0000
Q ss_pred CccchHHHHhhcCCCCCCCCCCCCCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHhhhhhhcCCCCcEEEEecchhh
Q 043601 166 NIVYFDELIELSGNASNFPDVSVKQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTAMDQELAGALDYVTLCVLPMFH 245 (488)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (488)
....++++...... ...+.....++++++|+|||||||.||+|+++|.++.... .......+...++|++++..|++|
T Consensus 208 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~ilyTSGTTG~PKgV~~sh~~~~~~~-~~~~~~~~~~~~~d~~~~~~~~~~ 285 (628)
T TIGR02316 208 RDVDYAALRTQHED-AQVPVEWLESNEPSYILYTSGTTGKPKGVQRDVGGYAVAL-ALSMWAIFGIRAGQVMFSASDVGW 285 (628)
T ss_pred ccccHHHHhhcccc-CCCCceecCCCCcEEEEECCCCCCCCceEEECCcHHHHHH-HHHHHHhcCCCCCcEEEEcCCCCe
Confidence 12345554432211 1122233567899999999999999999999999975431 222334456778899999999999
Q ss_pred HHhHHHHHHHHhhCCceEEEcCC----CCHHHHHHHHHhcCccEEEecHHHHHHHHhcCCc-cCCCCCCCccEEEEccCC
Q 043601 246 VFGLSFVVYAQLQKGNCVVSMRK----FDLETALRAIEKYRVTHWWVVPPIILALAKNVSL-VKKFDLSSLKGIGSGAAP 320 (488)
Q Consensus 246 ~~~~~~~~~~~l~~G~~~~~~~~----~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~-~~~~~l~~lr~v~~~G~~ 320 (488)
..++...++.++..|+++++.++ .++..+++.++++++|+++++|+++..|.+.... ....++++||.+++|||+
T Consensus 286 ~~g~~~~~~~~L~~G~~~v~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~~~~gGe~ 365 (628)
T TIGR02316 286 VVGHSYIVYAPLLAGAATVLYEGLPTNPDPGVWWSIVERYGVRTMFSAPTAIRVLKKQDAAWLRKHDLSSLHWLFLAGEP 365 (628)
T ss_pred eehhhHHHHHHHhccceEEEeCCCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhcCCcccccCCccceeEEEEecCC
Confidence 99876788999999999998763 4789999999999999999999999988875211 234578999999999999
Q ss_pred CcHHHHHHHHhhCCCCeEEeccCcccccccccccCCC--CCCCCCCceeecCCCceEEEEeCCCCCCCCCCCcceEEEec
Q 043601 321 LRKELVEECSKNLPTVTVFQGYGMTETCGVVTVENPL--LGVQNSGSTGTLVAGVEAQIVCVDTLKPLPPNQVGELWVRG 398 (488)
Q Consensus 321 l~~~~~~~~~~~~~~~~i~~~YG~tE~~~~~~~~~~~--~~~~~~~~~g~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g 398 (488)
+++++.+++.+.++ ..+++.||+||++..++..... ......+++|+|++++.++|+|.++|++++.|+.|||+++|
T Consensus 366 l~~~~~~~~~~~~~-~~~~~~yG~TE~~~~~~~~~~~~~~~~~~~gs~G~p~~g~~v~i~d~~~g~~~~~g~~Gel~v~g 444 (628)
T TIGR02316 366 LDEPTAHWITDGLG-KPVIDNYWQTETGWPVLAIMPGLDLKPVKLGSPGLPMYGYHLRVLDEATGRPCGPNEKGVLTVVP 444 (628)
T ss_pred CCHHHHHHHHHHhC-CCEEecccccccCceeecCCCCCCcCCCCCCCcccCcCCceEEEEECCCCCCCCCCCcEEEEEec
Confidence 99999999999886 8899999999998544332221 11245678999999999999996689999999999999998
Q ss_pred C---------------------------CccccceEEEccCCcEEEEcccCcceeeCcEEe---eHhHHHhcCCCeeeeE
Q 043601 399 P---------------------------ILMPGDLGYFDEHGQLFIVDRIKELIKCNGFQV---ELEGVLVSHPEILDAV 448 (488)
Q Consensus 399 ~---------------------------~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v---~ie~~l~~~~~v~~~~ 448 (488)
+ ||+|||+|++|+||+++++||+||+||++|++| +||+++.+||+|.|++
T Consensus 445 p~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~g~~d~dG~l~i~GR~dd~ik~~G~rv~~~eIE~~l~~~p~V~ea~ 524 (628)
T TIGR02316 445 PLPPGCLSTVWGDDARFLKTYWSHFKRPLYSSFDWGIRDEDGYTFILGRTDDVINVAGHRLGTREIEESVSSHPSVAEVA 524 (628)
T ss_pred CCCccccccccCChHHHHHhhhhcCCCCEEECCceEEEcCCCcEEEEEcCcceEEeCCEEeCHHHHHHHHHhCCCcceEE
Confidence 6 478999999999999999999999999999999 9999999999999999
Q ss_pred EEeecCCCCCceEEEEEEeCCCCCC--------CHHHHHHHHHhhcC
Q 043601 449 VIPFPDPEAGEVPIAYVVRSPNSSL--------TKEDVQKFVANDSQ 487 (488)
Q Consensus 449 v~~~~~~~~~~~~~~~v~~~~~~~~--------~~~~i~~~~~~~l~ 487 (488)
|++.+++..++.++++|+++++... ..++|+++++++|+
T Consensus 525 Vvg~~d~~~g~~~~~~vv~~~~~~~~~~~~~~~~~~~i~~~~~~~L~ 571 (628)
T TIGR02316 525 VVGVHDELKGQVAVVFAILKESDSAGDAHDPHAVETGMMDCVVRQLG 571 (628)
T ss_pred EEeeecCCCCeEEEEEEEEcCCcccccccchHHHHHHHHHHHHHhcC
Confidence 9999999999999999998876432 24689999998886
No 10
>PLN02246 4-coumarate--CoA ligase
Probab=100.00 E-value=1.8e-61 Score=492.50 Aligned_cols=463 Identities=40% Similarity=0.663 Sum_probs=387.4
Q ss_pred eeeecCCCCCCCCCCCCCCHHHHHhhccccCCCceEEEeCCCCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCC
Q 043601 10 GIYRSLRPALVLPQDPNLSMVHFLFRNSASYGSKSALIDADSGESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNS 89 (488)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~ 89 (488)
-++++..+....+.. +|+.+++.++++++|+++|+++.++++++||+||+++++++|++|.+.|+++||+|+++++|+
T Consensus 8 ~~~~~~~~~~~~~~~--~~~~~~l~~~~~~~~~~~a~~~~~~~~~~ty~el~~~~~~la~~L~~~g~~~gd~V~i~~~~~ 85 (537)
T PLN02246 8 FIFRSKLPDIYIPNH--LPLHDYCFERLSEFSDRPCLIDGATGRVYTYADVELLSRRVAAGLHKLGIRQGDVVMLLLPNC 85 (537)
T ss_pred eEecCCCCCCCCCCC--CcHHHHHHHHHHhCCCCeEEEecCCCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCC
Confidence 345555555544443 799999999999999999999865568999999999999999999999999999999999999
Q ss_pred cchHHHHHHHHHcCCeEeecCCCCCHHHHHHHHhhcCCeEEEEccccHHHHhccC----CCeEEEcccCcccCCCCcCCC
Q 043601 90 IQFPICLLGVIAIGGIATTANPVYTVSELSKQVKDSSPKLVVTVPELWERVKDFN----IPAVLLGSNHIVSPRGLRSSS 165 (488)
Q Consensus 90 ~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 165 (488)
+++++++|||+++|++++|++|.++.+++..+++.++++++|++......+.... ...+.++.. ..
T Consensus 86 ~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~i~~~~~----------~~ 155 (537)
T PLN02246 86 PEFVLAFLGASRRGAVTTTANPFYTPAEIAKQAKASGAKLIITQSCYVDKLKGLAEDDGVTVVTIDDP----------PE 155 (537)
T ss_pred hHHHHHHHHHHHcCEEEecCCCCCCHHHHHHHHHhcCCcEEEEccchHHHHHHHhhcCCceEEEeCCC----------CC
Confidence 9999999999999999999999999999999999999999999987766554321 222222211 11
Q ss_pred CccchHHHHhhcCCCCCCCCCCCCCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHh--hhhhhcCCCCcEEEEecch
Q 043601 166 NIVYFDELIELSGNASNFPDVSVKQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTA--MDQELAGALDYVTLCVLPM 243 (488)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 243 (488)
....+.++..... ...+.....++++++++|||||||.||+|+++|+++........ ....+...++++++...|+
T Consensus 156 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~i~~TSGtTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~pl 233 (537)
T PLN02246 156 GCLHFSELTQADE--NELPEVEISPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYFHSDDVILCVLPM 233 (537)
T ss_pred CceeHHHHhcCCC--CCCCCCCCCccCEEEEEeCCCCCCCCceEEEeHHHHHHHHHHHhhccccccCCCCCcEEEEeech
Confidence 2233444433221 22223345678999999999999999999999999987632211 1123456789999999999
Q ss_pred hhHHhHHHHHHHHhhCCceEEEcCCCCHHHHHHHHHhcCccEEEecHHHHHHHHhcCCccCCCCCCCccEEEEccCCCcH
Q 043601 244 FHVFGLSFVVYAQLQKGNCVVSMRKFDLETALRAIEKYRVTHWWVVPPIILALAKNVSLVKKFDLSSLKGIGSGAAPLRK 323 (488)
Q Consensus 244 ~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~v~~~G~~l~~ 323 (488)
+|.+++...++.++..|+++++.+.+++..+++.++++++|++.++|+++..|++. .......++++|.+++||+++++
T Consensus 234 ~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~-~~~~~~~~~~lr~~~~gg~~l~~ 312 (537)
T PLN02246 234 FHIYSLNSVLLCGLRVGAAILIMPKFEIGALLELIQRHKVTIAPFVPPIVLAIAKS-PVVEKYDLSSIRMVLSGAAPLGK 312 (537)
T ss_pred HHHHHHHHHHHHHHhcCCEEEEeCCCCHHHHHHHHHHhCceEEEcchHHHHHHhcC-ccccccCccceeEEEEecCcCCH
Confidence 99999877788899999999999999999999999999999999999999999876 44445568899999999999999
Q ss_pred HHHHHHHhhCCCCeEEeccCcccccccccccCC---CCCCCCCCceeecCCCceEEEEeCCCCCCCCCCCcceEEEecC-
Q 043601 324 ELVEECSKNLPTVTVFQGYGMTETCGVVTVENP---LLGVQNSGSTGTLVAGVEAQIVCVDTLKPLPPNQVGELWVRGP- 399 (488)
Q Consensus 324 ~~~~~~~~~~~~~~i~~~YG~tE~~~~~~~~~~---~~~~~~~~~~g~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~- 399 (488)
++.+.+.+.|++..+.+.||+||++.+++.... .......+++|+|++++.++++|++++++++.|+.|||+++|+
T Consensus 313 ~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~~ 392 (537)
T PLN02246 313 ELEDAFRAKLPNAVLGQGYGMTEAGPVLAMCLAFAKEPFPVKSGSCGTVVRNAELKIVDPETGASLPRNQPGEICIRGPQ 392 (537)
T ss_pred HHHHHHHHHcCCCeEeccccccccCcccccccccCCCCccccCCccccccCCcEEEEecCCCCCcCCCCCceEEEEECCc
Confidence 999999999987899999999999866543211 1113355789999999999999987899999999999999974
Q ss_pred --------------------CccccceEEEccCCcEEEEcccCcceeeCcEEe---eHhHHHhcCCCeeeeEEEeecCCC
Q 043601 400 --------------------ILMPGDLGYFDEHGQLFIVDRIKELIKCNGFQV---ELEGVLVSHPEILDAVVIPFPDPE 456 (488)
Q Consensus 400 --------------------~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v---~ie~~l~~~~~v~~~~v~~~~~~~ 456 (488)
|++|||+|+++++|.+++.||.+|+||.+|.+| +||..+.++|+|.+++|++.++..
T Consensus 393 ~~~GY~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~GR~dd~i~~~G~~i~~~eIE~~l~~~~~v~~~~v~~~~~~~ 472 (537)
T PLN02246 393 IMKGYLNDPEATANTIDKDGWLHTGDIGYIDDDDELFIVDRLKELIKYKGFQVAPAELEALLISHPSIADAAVVPMKDEV 472 (537)
T ss_pred hhccccCCchhhhhcccCCCCeeecceEEEeCCCeEEEEecccceEEECCEEECcHHHHHHHHhCCCeeEEEEEcccCcc
Confidence 678999999999999999999999999999999 999999999999999999998888
Q ss_pred CCceEEEEEEeCCCCCCCHHHHHHHHHhhcC
Q 043601 457 AGEVPIAYVVRSPNSSLTKEDVQKFVANDSQ 487 (488)
Q Consensus 457 ~~~~~~~~v~~~~~~~~~~~~i~~~~~~~l~ 487 (488)
.++.++++|+.+++...+.++++++++++|+
T Consensus 473 ~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~ 503 (537)
T PLN02246 473 AGEVPVAFVVRSNGSEITEDEIKQFVAKQVV 503 (537)
T ss_pred CCceeEEEEEeCCCCCCCHHHHHHHHHhhCc
Confidence 8889999999988777788999999999876
No 11
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=100.00 E-value=1.4e-61 Score=493.98 Aligned_cols=469 Identities=38% Similarity=0.636 Sum_probs=388.4
Q ss_pred CcceeeecCCCCCCCCCCCCCCHHHHHhhccccCCCceEEEeCCCCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEc
Q 043601 7 GRDGIYRSLRPALVLPQDPNLSMVHFLFRNSASYGSKSALIDADSGESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFA 86 (488)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~ 86 (488)
..+.+.++..++.+.+.. +|+.+++.+.++.+|+++|+++...++.+||+||.++++++|..|.+.|+++|++|++++
T Consensus 10 ~~~~~~~~~~~~~~~~~~--~~~~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~ 87 (546)
T PLN02330 10 DNEHIFRSRYPSVPVPDK--LTLPDFVLQDAELYADKVAFVEAVTGKAVTYGEVVRDTRRFAKALRSLGLRKGQVVVVVL 87 (546)
T ss_pred ccceeeccCCCCCCCCCC--CcHHHHHhhhhhcCCCccEEEecCCCCcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEC
Confidence 455677777777665443 899999999999999999998764468999999999999999999999999999999999
Q ss_pred CCCcchHHHHHHHHHcCCeEeecCCCCCHHHHHHHHhhcCCeEEEEccccHHHHhccCCCeEEEcccCcccCCCCcCCCC
Q 043601 87 PNSIQFPICLLGVIAIGGIATTANPVYTVSELSKQVKDSSPKLVVTVPELWERVKDFNIPAVLLGSNHIVSPRGLRSSSN 166 (488)
Q Consensus 87 ~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (488)
+|++++++++|||+++|++++|+++..+.+++.++++.++++++++++.....+.......+.+... ....
T Consensus 88 ~~~~~~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~i~~~~~---------~~~~ 158 (546)
T PLN02330 88 PNVAEYGIVALGIMAAGGVFSGANPTALESEIKKQAEAAGAKLIVTNDTNYGKVKGLGLPVIVLGEE---------KIEG 158 (546)
T ss_pred CCchHHHHHHHHHHHhCcEeccCCccCCHHHHHHHHHhcCCeEEEEccchhhhHhhcCCcEEEecCC---------CCCC
Confidence 9999999999999999999999999999999999999999999999998887776655544443321 1122
Q ss_pred ccchHHHHhhcCCC-CCCCCCCCCCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHhhhhhhcCCCCcEEEEecchhh
Q 043601 167 IVYFDELIELSGNA-SNFPDVSVKQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTAMDQELAGALDYVTLCVLPMFH 245 (488)
Q Consensus 167 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (488)
...+.+++...... .........++++++++|||||||.||+|+++|.++..................+..+...|++|
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~h 238 (546)
T PLN02330 159 AVNWKELLEAADRAGDTSDNEEILQTDLCALPFSSGTTGISKGVMLTHRNLVANLCSSLFSVGPEMIGQVVTLGLIPFFH 238 (546)
T ss_pred cccHHHHHhhccccCcccccccCCcccEEEEEeCCCCcCCCcEEEEehHHHHHHHHHHhhccCccccCceEEEEecChHH
Confidence 33455555433211 11122345578999999999999999999999999887532111111111123467888999999
Q ss_pred HHhHHHHHHHHhhCCceEEEcCCCCHHHHHHHHHhcCccEEEecHHHHHHHHhcCCccCCCCCC--CccEEEEccCCCcH
Q 043601 246 VFGLSFVVYAQLQKGNCVVSMRKFDLETALRAIEKYRVTHWWVVPPIILALAKNVSLVKKFDLS--SLKGIGSGAAPLRK 323 (488)
Q Consensus 246 ~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~--~lr~v~~~G~~l~~ 323 (488)
.+++...++.++..|+++++.+.+++..+++.++++++|.+.++|+++..++.. ......++. ++|.+++||+++++
T Consensus 239 ~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~-~~~~~~~~~~~~l~~i~~~g~~l~~ 317 (546)
T PLN02330 239 IYGITGICCATLRNKGKVVVMSRFELRTFLNALITQEVSFAPIVPPIILNLVKN-PIVEEFDLSKLKLQAIMTAAAPLAP 317 (546)
T ss_pred HHHHHHHHHHHhhcCCEEEEecccCHHHHHHHHHHcCCeeeecCCHHHHHHHhC-ccccccccchheeeeEEEcCCcCCH
Confidence 999877788899999999999999999999999999999999999999999876 333333444 47899999999999
Q ss_pred HHHHHHHhhCCCCeEEeccCcccccccccccC-CC--CCCCCCCceeecCCCceEEEEeCCCCCCCCCCCcceEEEecC-
Q 043601 324 ELVEECSKNLPTVTVFQGYGMTETCGVVTVEN-PL--LGVQNSGSTGTLVAGVEAQIVCVDTLKPLPPNQVGELWVRGP- 399 (488)
Q Consensus 324 ~~~~~~~~~~~~~~i~~~YG~tE~~~~~~~~~-~~--~~~~~~~~~g~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~- 399 (488)
+++++|.+.|+++++++.||+||++.+..... +. .......++|.|++++.++++|++++++++.|+.|||+++|+
T Consensus 318 ~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~v~i~d~~~~~~~p~g~~Gel~v~g~~ 397 (546)
T PLN02330 318 ELLTAFEAKFPGVQVQEAYGLTEHSCITLTHGDPEKGHGIAKKNSVGFILPNLEVKFIDPDTGRSLPKNTPGELCVRSQC 397 (546)
T ss_pred HHHHHHHHHcCCCeEEecccccccccceecCCCccccccccccCccccccCCcEEEEEeCCCCccCCCCCceEEEEecch
Confidence 99999999997799999999999986544321 11 112344689999999999999988899999999999999874
Q ss_pred --------------------CccccceEEEccCCcEEEEcccCcceeeCcEEe---eHhHHHhcCCCeeeeEEEeecCCC
Q 043601 400 --------------------ILMPGDLGYFDEHGQLFIVDRIKELIKCNGFQV---ELEGVLVSHPEILDAVVIPFPDPE 456 (488)
Q Consensus 400 --------------------~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v---~ie~~l~~~~~v~~~~v~~~~~~~ 456 (488)
||+|||+|++++||.+++.||.+|+|+++|++| +||.++.+++.|.+++|++.+++.
T Consensus 398 ~~~gy~~~~~~~~~~~~~~g~~~TGD~~~~~~dG~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~ 477 (546)
T PLN02330 398 VMQGYYNNKEETDRTIDEDGWLHTGDIGYIDDDGDIFIVDRIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVPLPDEE 477 (546)
T ss_pred hhhhhccCccchhhhccCCCceecccEEEEeCCCcEEEEechHHhhhcCCEEECHHHHHHHHHhCCchheEEEEeccccc
Confidence 688999999999999999999999999999999 999999999999999999999888
Q ss_pred CCceEEEEEEeCCCCCCCHHHHHHHHHhhcC
Q 043601 457 AGEVPIAYVVRSPNSSLTKEDVQKFVANDSQ 487 (488)
Q Consensus 457 ~~~~~~~~v~~~~~~~~~~~~i~~~~~~~l~ 487 (488)
.++.++++|+..++...+.++++++++++|+
T Consensus 478 ~g~~~~a~v~~~~~~~~~~~~l~~~~~~~l~ 508 (546)
T PLN02330 478 AGEIPAACVVINPKAKESEEDILNFVAANVA 508 (546)
T ss_pred cCceeEEEEEECCCCCCCHHHHHHHHHHhcc
Confidence 8899999999988767788999999998876
No 12
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=100.00 E-value=1.9e-61 Score=500.38 Aligned_cols=455 Identities=25% Similarity=0.357 Sum_probs=367.4
Q ss_pred CCHH-HHHhhccccCCCceEEEeCCC----CcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHH
Q 043601 27 LSMV-HFLFRNSASYGSKSALIDADS----GESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQFPICLLGVIA 101 (488)
Q Consensus 27 ~~l~-~~l~~~a~~~p~~~a~~~~~~----~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~ 101 (488)
+|+. +.|.++++.+|+++|+++... .+.+||+||+++++++|+.|+++|+++||+|+++++|++++++++|||++
T Consensus 56 ~n~~~~~l~~~~~~~p~~~Al~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~ 135 (625)
T TIGR02188 56 LNVSYNCVDRHLEARPDKVAIIWEGDEPGEVRKITYRELHREVCRFANVLKSLGVKKGDRVAIYMPMIPEAAIAMLACAR 135 (625)
T ss_pred EEHHHHHHHHhhccCCCCeEEEEEcCCCCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHH
Confidence 3444 456677888999999986422 36899999999999999999999999999999999999999999999999
Q ss_pred cCCeEeecCCCCCHHHHHHHHhhcCCeEEEEccccHH---------HH----hcc--CCCeEEEcccCcccCCCCcCCCC
Q 043601 102 IGGIATTANPVYTVSELSKQVKDSSPKLVVTVPELWE---------RV----KDF--NIPAVLLGSNHIVSPRGLRSSSN 166 (488)
Q Consensus 102 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~---------~~----~~~--~~~~~~~~~~~~~~~~~~~~~~~ 166 (488)
+|++++|+++.++.+++..+++.++++++|+++.... .+ ... ....+++....... ... ....
T Consensus 136 ~Gav~v~i~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~ 213 (625)
T TIGR02188 136 IGAIHSVVFGGFSAEALADRINDAGAKLVITADEGLRGGKVIPLKAIVDEALEKCPVSVEHVLVVRRTGNP-VPW-VEGR 213 (625)
T ss_pred hCCEEeccCCCCCHHHHHHHHHhcCCCEEEEcCccccCCcccchHHHHHHHHHhCCCCccEEEEEcCCCCC-cCc-cccc
Confidence 9999999999999999999999999999999875321 11 111 11212221110000 000 0011
Q ss_pred ccchHHHHhhcCCCCCCCCCCCCCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHhhhhhhcCCCCcEEEEecchhhH
Q 043601 167 IVYFDELIELSGNASNFPDVSVKQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTAMDQELAGALDYVTLCVLPMFHV 246 (488)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (488)
...+++++.... .........++++++|+|||||||.||+|+++|.++...... .....+...+++++++..|++|+
T Consensus 214 ~~~~~~~~~~~~--~~~~~~~~~~~~~a~il~TSGTTG~PKgV~~s~~~~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~ 290 (625)
T TIGR02188 214 DVWWHDLMAKAS--AYCEPEPMDSEDPLFILYTSGSTGKPKGVLHTTGGYLLYAAM-TMKYVFDIKDGDIFWCTADVGWI 290 (625)
T ss_pred cccHHHHHhhcC--CCCCceecCCCCceEEEecCCCCCCCCeEEECccHhHHHHHH-HHHhccCCCCCcEEEECCCchhh
Confidence 223555554322 222334567789999999999999999999999998654221 12333456788999999999999
Q ss_pred HhHHHHHHHHhhCCceEEEcCC----CCHHHHHHHHHhcCccEEEecHHHHHHHHhcCCc-cCCCCCCCccEEEEccCCC
Q 043601 247 FGLSFVVYAQLQKGNCVVSMRK----FDLETALRAIEKYRVTHWWVVPPIILALAKNVSL-VKKFDLSSLKGIGSGAAPL 321 (488)
Q Consensus 247 ~~~~~~~~~~l~~G~~~~~~~~----~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~-~~~~~l~~lr~v~~~G~~l 321 (488)
.+..+.++.++..|+++++.+. .++..+++.++++++|+++++|+++..|.+.... ....++++||.++++|+++
T Consensus 291 ~g~~~~~~~~l~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~i~~~G~~l 370 (625)
T TIGR02188 291 TGHSYIVYGPLANGATTVMFEGTPTYPDPGRFWEIIEKHKVTIFYTAPTAIRALMRLGDEWVKKHDLSSLRLLGSVGEPI 370 (625)
T ss_pred hccHHHHHHHHHcCCeEEEECCCCCCCChhHHHHHHHHhCCeEEEeCHHHHHHHHhcCCcccccCCccceeEEEEecCCC
Confidence 8876778999999999998753 4789999999999999999999999999876211 2235688999999999999
Q ss_pred cHHHHHHHHhhCC--CCeEEeccCcccccccccccCCCCCCCCCCceeecCCCceEEEEeCCCCCCCC-CCCcceEEEec
Q 043601 322 RKELVEECSKNLP--TVTVFQGYGMTETCGVVTVENPLLGVQNSGSTGTLVAGVEAQIVCVDTLKPLP-PNQVGELWVRG 398 (488)
Q Consensus 322 ~~~~~~~~~~~~~--~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d~~~~~~~~-~g~~Gel~v~g 398 (488)
++++.+++.+.++ ++.+++.||+||+++.++...+.....+.+++|+|++++.++|+| ++|++++ .|+.|||+++|
T Consensus 371 ~~~~~~~~~~~~~~~~~~i~~~yG~TE~~~~~~~~~~~~~~~~~~~~G~p~~g~~~~i~d-~~g~~~~~~g~~GeL~v~~ 449 (625)
T TIGR02188 371 NPEAWMWYYKVVGKERCPIVDTWWQTETGGIMITPLPGATPTKPGSATLPFFGIEPAVVD-EEGNPVEGPGEGGYLVIKQ 449 (625)
T ss_pred CHHHHHHHHHHcCCCCCceEecccccccCCceeecCCCCCCcCCCcccCCcCCceEEEEC-CCCCCCCCCCCeEEEEEcc
Confidence 9999999999886 378999999999987665443322245678899999999999999 7899999 89999999998
Q ss_pred C-------------------------CccccceEEEccCCcEEEEcccCcceeeCcEEe---eHhHHHhcCCCeeeeEEE
Q 043601 399 P-------------------------ILMPGDLGYFDEHGQLFIVDRIKELIKCNGFQV---ELEGVLVSHPEILDAVVI 450 (488)
Q Consensus 399 ~-------------------------~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v---~ie~~l~~~~~v~~~~v~ 450 (488)
+ ||+|||+|++|+||++++.||+||+||++|++| +||+++.++|.|.+++|+
T Consensus 450 p~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~d~dG~l~i~GR~dd~i~~~G~ri~p~eIE~~l~~~p~V~e~~vv 529 (625)
T TIGR02188 450 PWPGMLRTIYGDHERFVDTYFSPFPGYYFTGDGARRDKDGYIWITGRVDDVINVSGHRLGTAEIESALVSHPAVAEAAVV 529 (625)
T ss_pred CCCcccccccCChHHHHHHHhccCCCEEECCceEEEcCCCcEEEEecccCEEEeCCEEECHHHHHHHHHhCCCcceEEEE
Confidence 4 478999999999999999999999999999999 999999999999999999
Q ss_pred eecCCCCCceEEEEEEeCCCCCCCH---HHHHHHHHhhcC
Q 043601 451 PFPDPEAGEVPIAYVVRSPNSSLTK---EDVQKFVANDSQ 487 (488)
Q Consensus 451 ~~~~~~~~~~~~~~v~~~~~~~~~~---~~i~~~~~~~l~ 487 (488)
+.+++..++.++++|+++++...+. ++|+++++++|+
T Consensus 530 g~~~~~~g~~~~a~vv~~~~~~~~~~~~~~l~~~~~~~l~ 569 (625)
T TIGR02188 530 GIPDDIKGQAIYAFVTLKDGYEPDDELRKELRKHVRKEIG 569 (625)
T ss_pred eeEcCCCCeEEEEEEEeCCCCCCCHHHHHHHHHHHHhhcC
Confidence 9999989999999999988765543 689999998876
No 13
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.2e-61 Score=500.76 Aligned_cols=456 Identities=25% Similarity=0.310 Sum_probs=354.7
Q ss_pred CCHHH-HHhhcccc--CCCceEEEeCC--C--CcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHH
Q 043601 27 LSMVH-FLFRNSAS--YGSKSALIDAD--S--GESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQFPICLLGV 99 (488)
Q Consensus 27 ~~l~~-~l~~~a~~--~p~~~a~~~~~--~--~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~ 99 (488)
+|... ++.++++. +|+++|+++.. . .+++||+||+++++++|+.|+++|+++||+|+++++|++++++++|||
T Consensus 58 ~n~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GDrV~i~~~n~~e~~~~~lA~ 137 (647)
T PTZ00237 58 LNTCYNVLDIHVKNPLKRDQDALIYECPYLKKTIKLTYYQLYEKVCEFSRVLLNLNISKNDNVLIYMANTLEPLIAMLSC 137 (647)
T ss_pred eeHHHHHHHHhhcccCCCCceEEEEEcCCCCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHH
Confidence 45544 45566543 79999998641 1 368999999999999999999999999999999999999999999999
Q ss_pred HHcCCeEeecCCCCCHHHHHHHHhhcCCeEEEEcccc---------HHHHh---cc---CCCeEE-EcccCcccCC----
Q 043601 100 IAIGGIATTANPVYTVSELSKQVKDSSPKLVVTVPEL---------WERVK---DF---NIPAVL-LGSNHIVSPR---- 159 (488)
Q Consensus 100 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~---------~~~~~---~~---~~~~~~-~~~~~~~~~~---- 159 (488)
+++|++++|+++.++.+++.+++++++++++|+++.. .+.+. .. ....++ +.........
T Consensus 138 ~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~ 217 (647)
T PTZ00237 138 ARIGATHCVLFDGYSVKSLIDRIETITPKLIITTNYGILNDEIITFTPNLKEAIELSTFKPSNVITLFRNDITSESDLKK 217 (647)
T ss_pred HHhCcEEEeeCCCCCHHHHHHHHHhcCCCEEEEcccceeCCceechHHHHHHHHhcccCCCCEEEEEEcCCccccccccc
Confidence 9999999999999999999999999999999997531 11111 10 111222 2111100000
Q ss_pred --CCcCCCCccchHHHHhhcCC---CCCCCCCCCCCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHhhhhhhcCCCC
Q 043601 160 --GLRSSSNIVYFDELIELSGN---ASNFPDVSVKQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTAMDQELAGALD 234 (488)
Q Consensus 160 --~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~ 234 (488)
..........+++++..... ..........++++++|+|||||||.||+|+++|.+.+... ............+
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~IlyTSGTTG~PKgV~~sh~~~l~~~-~~~~~~~~~~~~~ 296 (647)
T PTZ00237 218 IETIPTIPNTLSWYDEIKKIKENNQSPFYEYVPVESSHPLYILYTSGTTGNSKAVVRSNGPHLVGL-KYYWRSIIEKDIP 296 (647)
T ss_pred ccccCCCcccccHHHHHhhhccccCCCCCCceeeCCCCcEEEEEcCCCCCCCCeEEEcCcHHHHHH-HHHHHHhcCCCCC
Confidence 00011122346665542210 01122345678999999999999999999999999843321 2222333445678
Q ss_pred cEEEEecchhhHHhHHHHHHHHhhCCceEEEcCC--CC----HHHHHHHHHhcCccEEEecHHHHHHHHhcCCc----cC
Q 043601 235 YVTLCVLPMFHVFGLSFVVYAQLQKGNCVVSMRK--FD----LETALRAIEKYRVTHWWVVPPIILALAKNVSL----VK 304 (488)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~~~--~~----~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~----~~ 304 (488)
+++++..|++|+.+. ..++.++..|+++++.++ .. +..+++.++++++|+++++|+++..|++.... ..
T Consensus 297 d~~~~~~~~~w~~~~-~~~~~~l~~G~t~v~~~~~~~~p~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~ 375 (647)
T PTZ00237 297 TVVFSHSSIGWVSFH-GFLYGSLSLGNTFVMFEGGIIKNKHIEDDLWNTIEKHKVTHTLTLPKTIRYLIKTDPEATIIRS 375 (647)
T ss_pred cEEEEcCCCceEeeH-HHHHHHHhCCcEEEEeCCCCCCCCCchHHHHHHHHHhCeEEEEeCHHHHHHHHhhCcccccccc
Confidence 899999999998765 568889999999998754 12 68899999999999999999999999875221 13
Q ss_pred CCCCCCccEEEEccCCCcHHHHHHHHhhCCCCeEEeccCcccccccccccCCCCCCCCCCceeecCCCceEEEEeCCCCC
Q 043601 305 KFDLSSLKGIGSGAAPLRKELVEECSKNLPTVTVFQGYGMTETCGVVTVENPLLGVQNSGSTGTLVAGVEAQIVCVDTLK 384 (488)
Q Consensus 305 ~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d~~~~~ 384 (488)
..++++||.++++|+++++++.+++.+.++ +.+++.||+||+++....... ......+++|+|+|+++++|+| ++|+
T Consensus 376 ~~~l~~Lr~i~~~G~~l~~~~~~~~~~~~g-~~i~~~yG~TE~~~~~~~~~~-~~~~~~~s~G~p~~g~~~~i~d-~~g~ 452 (647)
T PTZ00237 376 KYDLSNLKEIWCGGEVIEESIPEYIENKLK-IKSSRGYGQTEIGITYLYCYG-HINIPYNATGVPSIFIKPSILS-EDGK 452 (647)
T ss_pred ccCcchheEEEecCccCCHHHHHHHHHhcC-CCEEeeechHHhChhhhccCC-CCCCCCCCCccCcCCceEEEEC-CCCC
Confidence 457899999999999999999999999987 999999999999865543332 1123457899999999999999 5899
Q ss_pred CCCCCCcceEEEecC-------------------------CccccceEEEccCCcEEEEcccCcceeeCcEEe---eHhH
Q 043601 385 PLPPNQVGELWVRGP-------------------------ILMPGDLGYFDEHGQLFIVDRIKELIKCNGFQV---ELEG 436 (488)
Q Consensus 385 ~~~~g~~Gel~v~g~-------------------------~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v---~ie~ 436 (488)
+++.|+.|||+++++ |++|||+|++|+||++++.||+||+||++|++| +||+
T Consensus 453 ~~~~ge~GEl~v~~p~~p~~~~gy~~~~~~~~~~f~~~~g~~~TGDlg~~d~dG~l~i~GR~dd~i~~~G~rI~p~eIE~ 532 (647)
T PTZ00237 453 ELNVNEIGEVAFKLPMPPSFATTFYKNDEKFKQLFSKFPGYYNSGDLGFKDENGYYTIVSRSDDQIKISGNKVQLNTIET 532 (647)
T ss_pred CCCCCCceEEEEeccCCchhhCceeCCHHHHHHHHhCCCCEEECCcEEEECCCCeEEEEeccCCEEEECCEEeCHHHHHH
Confidence 999999999999864 478999999999999999999999999999999 9999
Q ss_pred HHhcCCCeeeeEEEeecCCCCCceEEEEEEeCCC---CCCCH----HHHHHHHHhhcC
Q 043601 437 VLVSHPEILDAVVIPFPDPEAGEVPIAYVVRSPN---SSLTK----EDVQKFVANDSQ 487 (488)
Q Consensus 437 ~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~---~~~~~----~~i~~~~~~~l~ 487 (488)
++.+||.|.|++|++.+++..++.++++|+++++ ...+. ++|+++++++|+
T Consensus 533 ~l~~~p~V~eaavvg~~~~~~g~~~~a~Vv~~~~~~~~~~~~~~l~~~i~~~~~~~l~ 590 (647)
T PTZ00237 533 SILKHPLVLECCSIGIYDPDCYNVPIGLLVLKQDQSNQSIDLNKLKNEINNIITQDIE 590 (647)
T ss_pred HHHhCCCceeeEEEeeEcCCCCCEEEEEEEeccCccccCCCHHHHHHHHHHHHHhhcC
Confidence 9999999999999999999999999999999853 23343 456777777765
No 14
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=5.8e-61 Score=497.60 Aligned_cols=455 Identities=24% Similarity=0.373 Sum_probs=366.8
Q ss_pred CCHH-HHHhhccccCCCceEEEeCC----CCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHH
Q 043601 27 LSMV-HFLFRNSASYGSKSALIDAD----SGESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQFPICLLGVIA 101 (488)
Q Consensus 27 ~~l~-~~l~~~a~~~p~~~a~~~~~----~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~ 101 (488)
+|+. +.|.++++++|+++|+++.+ ..+.+||+||+++++++|+.|+++|+++||+|+++++|++++++++|||++
T Consensus 66 ~n~~~~~l~~~~~~~p~~~Al~~~~~~~~~~~~lTy~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~ 145 (637)
T PRK00174 66 LNVSYNCLDRHLKTRGDKVAIIWEGDDPGDSRKITYRELHREVCRFANALKSLGVKKGDRVAIYMPMIPEAAVAMLACAR 145 (637)
T ss_pred eEHHHHHHHHhhccCCCCeEEEEECCCCCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHH
Confidence 4544 45777888999999998642 235899999999999999999999999999999999999999999999999
Q ss_pred cCCeEeecCCCCCHHHHHHHHhhcCCeEEEEccccHH---------HHh----cc-CCCeEEEcccCcccCCCCcCCCCc
Q 043601 102 IGGIATTANPVYTVSELSKQVKDSSPKLVVTVPELWE---------RVK----DF-NIPAVLLGSNHIVSPRGLRSSSNI 167 (488)
Q Consensus 102 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~---------~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~ 167 (488)
+|++++|+++.++.+++.++++.++++++|+++.... .+. .. ....+++...... .... .....
T Consensus 146 ~Gav~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~ 223 (637)
T PRK00174 146 IGAVHSVVFGGFSAEALADRIIDAGAKLVITADEGVRGGKPIPLKANVDEALANCPSVEKVIVVRRTGG-DVDW-VEGRD 223 (637)
T ss_pred cCCEEEecCCCCCHHHHHHHHHhcCCcEEEEcCccccCCcccchHHHHHHHHHhCCCccEEEEEcCCCC-CcCc-CCCCc
Confidence 9999999999999999999999999999999865321 111 11 1122222111000 0000 00112
Q ss_pred cchHHHHhhcCCCCCCCCCCCCCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHhhhhhhcCCCCcEEEEecchhhHH
Q 043601 168 VYFDELIELSGNASNFPDVSVKQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTAMDQELAGALDYVTLCVLPMFHVF 247 (488)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (488)
..++++..... ..........+++++|+|||||||.||+|+++|.++...... .....+...+++++++..|++|..
T Consensus 224 ~~~~~~~~~~~--~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~~ 300 (637)
T PRK00174 224 LWWHELVAGAS--DECEPEPMDAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAAM-TMKYVFDYKDGDVYWCTADVGWVT 300 (637)
T ss_pred ccHHHHHhhcC--CCCCccccCCCCcEEEEECCCCCCCCceEEeCcchhHHHHHH-HHHhccCCCCCcEEEEcCCchHhh
Confidence 23555543222 222334456789999999999999999999999998754222 122334567789999999999999
Q ss_pred hHHHHHHHHhhCCceEEEcCC----CCHHHHHHHHHhcCccEEEecHHHHHHHHhcCCc-cCCCCCCCccEEEEccCCCc
Q 043601 248 GLSFVVYAQLQKGNCVVSMRK----FDLETALRAIEKYRVTHWWVVPPIILALAKNVSL-VKKFDLSSLKGIGSGAAPLR 322 (488)
Q Consensus 248 ~~~~~~~~~l~~G~~~~~~~~----~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~-~~~~~l~~lr~v~~~G~~l~ 322 (488)
+..+.++.++..|+++++.+. .++..+++.++++++|++.++|++++.+++.... ....++++||.++++|++++
T Consensus 301 ~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~~Ge~l~ 380 (637)
T PRK00174 301 GHSYIVYGPLANGATTLMFEGVPNYPDPGRFWEVIDKHKVTIFYTAPTAIRALMKEGDEHPKKYDLSSLRLLGSVGEPIN 380 (637)
T ss_pred hhHHHHHHHHHcCCEEEEECCCCCCCChHHHHHHHHhcCCeEEeecHHHHHHHHhcCCcccccCCccceeEEEEeCCCCC
Confidence 887788999999999998753 4789999999999999999999999999876221 22456889999999999999
Q ss_pred HHHHHHHHhhCCC--CeEEeccCcccccccccccCCCCCCCCCCceeecCCCceEEEEeCCCCCCCCCCCcceEEEecC-
Q 043601 323 KELVEECSKNLPT--VTVFQGYGMTETCGVVTVENPLLGVQNSGSTGTLVAGVEAQIVCVDTLKPLPPNQVGELWVRGP- 399 (488)
Q Consensus 323 ~~~~~~~~~~~~~--~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~- 399 (488)
+++.+++.+.++. +.+++.||+||+++.+....+.....+.+++|+|++++.++|+| +++++++.|+.|||+++|+
T Consensus 381 ~~~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~vG~p~~g~~~~i~d-~~g~~~~~g~~Gel~v~g~~ 459 (637)
T PRK00174 381 PEAWEWYYKVVGGERCPIVDTWWQTETGGIMITPLPGATPLKPGSATRPLPGIQPAVVD-EEGNPLEGGEGGNLVIKDPW 459 (637)
T ss_pred HHHHHHHHHHhCCCCCceEecccccccCCceEecCCCCCCcCCCcccCCCCCceEEEEC-CCCCCCCCCCcEEEEEcCCC
Confidence 9999999998863 78999999999987655433322234567899999999999999 6899999999999999983
Q ss_pred ------------------------CccccceEEEccCCcEEEEcccCcceeeCcEEe---eHhHHHhcCCCeeeeEEEee
Q 043601 400 ------------------------ILMPGDLGYFDEHGQLFIVDRIKELIKCNGFQV---ELEGVLVSHPEILDAVVIPF 452 (488)
Q Consensus 400 ------------------------~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v---~ie~~l~~~~~v~~~~v~~~ 452 (488)
||+|||+|++++||++++.||+||+||++|++| +||.+|.++|+|.+++|++.
T Consensus 460 p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~d~dG~l~~~GR~dd~ik~~G~~v~p~eIE~~l~~~~~V~~~~Vvg~ 539 (637)
T PRK00174 460 PGMMRTIYGDHERFVKTYFSTFKGMYFTGDGARRDEDGYYWITGRVDDVLNVSGHRLGTAEIESALVAHPKVAEAAVVGR 539 (637)
T ss_pred CcccccccCCHHHHHHhhhcCCCCEEECCceEEEcCCCcEEEEEecccEEEeCCEEECHHHHHHHHHhCCCcceEEEEee
Confidence 478999999999999999999999999999999 99999999999999999999
Q ss_pred cCCCCCceEEEEEEeCCCCCCC---HHHHHHHHHhhcC
Q 043601 453 PDPEAGEVPIAYVVRSPNSSLT---KEDVQKFVANDSQ 487 (488)
Q Consensus 453 ~~~~~~~~~~~~v~~~~~~~~~---~~~i~~~~~~~l~ 487 (488)
+++..++.++++|+++++...+ .++|+++++++|+
T Consensus 540 ~~~~~g~~~~a~vv~~~~~~~~~~~~~~l~~~l~~~l~ 577 (637)
T PRK00174 540 PDDIKGQGIYAFVTLKGGEEPSDELRKELRNWVRKEIG 577 (637)
T ss_pred EcCCCCeEEEEEEEECCCCCCCHHHHHHHHHHHHhhcC
Confidence 9998999999999998876544 5789999998876
No 15
>PLN02614 long-chain acyl-CoA synthetase
Probab=100.00 E-value=2.1e-61 Score=499.54 Aligned_cols=433 Identities=22% Similarity=0.280 Sum_probs=338.3
Q ss_pred CCHHHHHhhccccCCCceEEEeC---C--CC--cceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHH
Q 043601 27 LSMVHFLFRNSASYGSKSALIDA---D--SG--ESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQFPICLLGV 99 (488)
Q Consensus 27 ~~l~~~l~~~a~~~p~~~a~~~~---~--~~--~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~ 99 (488)
.|+.++|.++++++|+++|+.+. + .+ .++||+||+++++++|++|+++|+++||+|+|+++|+++|++++|||
T Consensus 45 ~t~~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~Gd~Vai~~~n~~e~~~~~lA~ 124 (666)
T PLN02614 45 DSCWDVFRMSVEKYPNNPMLGRREIVDGKPGKYVWQTYQEVYDIVIKLGNSLRSVGVKDEAKCGIYGANSPEWIISMEAC 124 (666)
T ss_pred CcHHHHHHHHHHhCCCCCeEEEecccCCCCCCcEEeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHH
Confidence 49999999999999999999742 1 12 35899999999999999999999999999999999999999999999
Q ss_pred HHcCCeEeecCCCCCHHHHHHHHhhcCCeEEEEccccHHHHhccC------CCeEEEcccCcccCC--CCcCCCCccchH
Q 043601 100 IAIGGIATTANPVYTVSELSKQVKDSSPKLVVTVPELWERVKDFN------IPAVLLGSNHIVSPR--GLRSSSNIVYFD 171 (488)
Q Consensus 100 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~------~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 171 (488)
+++|+++||+++.++.+++.+++++++++++|++.+....+.... ...++.......... .........+++
T Consensus 125 ~~~Gav~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~~~~l~~vi~~~~~~~~~~~~~~~~~~~~~~~~ 204 (666)
T PLN02614 125 NAHGLYCVPLYDTLGAGAVEFIISHSEVSIVFVEEKKISELFKTCPNSTEYMKTVVSFGGVSREQKEEAETFGLVIYAWD 204 (666)
T ss_pred HHcCCEEEEecCCCCHHHHHHHHhccCCCEEEECHHHHHHHHHhcccccccceEEEEeCCCChHHhhhhhhcCcEEEEHH
Confidence 999999999999999999999999999999999877555442211 122222111000000 000011234566
Q ss_pred HHHhhcCCCCCCCCCCCCCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHhhhhh-----hcCCCCcEEEEecchhhH
Q 043601 172 ELIELSGNASNFPDVSVKQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTAMDQE-----LAGALDYVTLCVLPMFHV 246 (488)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 246 (488)
+++..... .........++++++|+|||||||.||||++||.++...+.. .... ....++|++++.+|++|.
T Consensus 205 ~~~~~~~~-~~~~~~~~~~~d~a~I~yTSGTTG~PKGV~lth~nl~~~~~~--~~~~~~~~~~~~~~~d~~l~~lPl~H~ 281 (666)
T PLN02614 205 EFLKLGEG-KQYDLPIKKKSDICTIMYTSGTTGDPKGVMISNESIVTLIAG--VIRLLKSANAALTVKDVYLSYLPLAHI 281 (666)
T ss_pred HHHhhccc-CCCCCCCCCCCceEEEEEcCCCCCCCcEEEEecHHHHHHHHH--HHhhccccccCCCCCcEEEEeccHHHH
Confidence 66543321 111122346789999999999999999999999999876332 2111 235678999999999999
Q ss_pred HhHHHHHHHHhhCCceEEEcCCCCHHHHHHHHHhcCccEEEecHHHHHHHHhcCCc----cC------------------
Q 043601 247 FGLSFVVYAQLQKGNCVVSMRKFDLETALRAIEKYRVTHWWVVPPIILALAKNVSL----VK------------------ 304 (488)
Q Consensus 247 ~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~----~~------------------ 304 (488)
++.. ..+..+..|+++++.+ .++..+++.+++++||+++++|++++.+...... ..
T Consensus 282 ~~~~-~~~~~l~~G~~v~~~~-~~~~~~~~~i~~~~~T~~~~vP~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ 359 (666)
T PLN02614 282 FDRV-IEECFIQHGAAIGFWR-GDVKLLIEDLGELKPTIFCAVPRVLDRVYSGLQKKLSDGGFLKKFVFDSAFSYKFGNM 359 (666)
T ss_pred HHHH-HHHHHHHhCCEEEEeC-CCHHHHHHHHHHhCCeEEEecHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHH
Confidence 9884 4566688999998875 5899999999999999999999999988642100 00
Q ss_pred --------CC-------------CC-CCccEEEEccCCCcHHHHHHHHhhCCCCeEEeccCcccccccccccCCCCCCCC
Q 043601 305 --------KF-------------DL-SSLKGIGSGAAPLRKELVEECSKNLPTVTVFQGYGMTETCGVVTVENPLLGVQN 362 (488)
Q Consensus 305 --------~~-------------~l-~~lr~v~~~G~~l~~~~~~~~~~~~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~ 362 (488)
.. .+ ++||.+++||+++++.+ +.|.+.++++.+++.||+||+++..+...+.+ ...
T Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~~~~Gga~l~~~~-~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~-~~~ 437 (666)
T PLN02614 360 KKGQSHVEASPLCDKLVFNKVKQGLGGNVRIILSGAAPLASHV-ESFLRVVACCHVLQGYGLTESCAGTFVSLPDE-LDM 437 (666)
T ss_pred HcCCCCcccchHHHHHHHHHHHHHhCCcEEEEEEcCCCCCHHH-HHHHHHhcCCCEEeeCchHhhhhheeeecccc-CCc
Confidence 00 11 68999999999999875 56667776689999999999976544433321 235
Q ss_pred CCceeecCCCceEEEEeCCC--CCCCCCCCcceEEEecC--------------------CccccceEEEccCCcEEEEcc
Q 043601 363 SGSTGTLVAGVEAQIVCVDT--LKPLPPNQVGELWVRGP--------------------ILMPGDLGYFDEHGQLFIVDR 420 (488)
Q Consensus 363 ~~~~g~~~~~~~~~i~d~~~--~~~~~~g~~Gel~v~g~--------------------~~~tGD~~~~~~~g~l~~~GR 420 (488)
.+++|+|+|+++++|+|.++ +++++.|+.|||+|+|+ |++|||+|++|+||+|+|.||
T Consensus 438 ~gsvG~p~pg~evki~d~~~~~~~~~~~g~~GEl~vrGp~v~~GY~~~pe~T~~~f~dGw~~TGDlg~~d~dG~l~i~gR 517 (666)
T PLN02614 438 LGTVGPPVPNVDIRLESVPEMEYDALASTPRGEICIRGKTLFSGYYKREDLTKEVLIDGWLHTGDVGEWQPNGSMKIIDR 517 (666)
T ss_pred CCcccCcCCceEEEEeeecccCcccCCCCCCceEEEcCCcccccccCCHHHhhhhhccCCcccceEEEEcCCCCEEEEEc
Confidence 68999999999999998433 47889999999999986 789999999999999999999
Q ss_pred cCcceee-CcEEe---eHhHHHhcCCCeeeeEEEeecCCCCCceEEEEEEeCC
Q 043601 421 IKELIKC-NGFQV---ELEGVLVSHPEILDAVVIPFPDPEAGEVPIAYVVRSP 469 (488)
Q Consensus 421 ~~d~i~~-~G~~v---~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~ 469 (488)
+||+||+ +|++| +||+++.+||.|.+++|++.+... .++|+|++..
T Consensus 518 ~kd~ik~~~G~~V~p~eIE~~l~~~p~V~~~~V~g~~~~~---~l~alvv~~~ 567 (666)
T PLN02614 518 KKNIFKLSQGEYVAVENIENIYGEVQAVDSVWVYGNSFES---FLVAIANPNQ 567 (666)
T ss_pred chhceecCCCeeecHHHHHHHHhcCCCeeEEEEEecCCcc---eEEEEEeCCH
Confidence 9999997 79999 999999999999999999986432 6899998754
No 16
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.1e-60 Score=488.39 Aligned_cols=453 Identities=32% Similarity=0.507 Sum_probs=381.9
Q ss_pred CCCCCHHHHHhhccccCCCceEEEeCCCCcceeHHHHHHHHHHHHHHHHHc-CCCCCCEEEEEcCCCcchHHHHHHHHHc
Q 043601 24 DPNLSMVHFLFRNSASYGSKSALIDADSGESLTFSQFKSIVIKVSHGFRHL-GVTKHDVVLIFAPNSIQFPICLLGVIAI 102 (488)
Q Consensus 24 ~~~~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~-g~~~g~~V~i~~~n~~~~~~~~lA~~~~ 102 (488)
.|+.|+.+.|.++++.+|+++|+.+. ++++||+||.+++.++|..|.+. |+++|++|+++++|++++++++|||+++
T Consensus 7 ~~~~tl~~~l~~~a~~~~~~~a~~~~--~~~~Ty~~l~~~v~~~a~~L~~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~ 84 (546)
T PRK08314 7 LPETSLFHNLEVSARRYPDKTAIVFY--GRAISYRELLEEAERLAGYLQQECGVRKGDRVLLYMQNSPQFVIAYYAILRA 84 (546)
T ss_pred CCCCCHHHHHHHHHHHcCCCcceeec--CceecHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCChHHHHHHHHHHHc
Confidence 35679999999999999999999987 68999999999999999999999 9999999999999999999999999999
Q ss_pred CCeEeecCCCCCHHHHHHHHhhcCCeEEEEccccHHHHhcc----CCCeEEEcc-cCcccC-------C--------CCc
Q 043601 103 GGIATTANPVYTVSELSKQVKDSSPKLVVTVPELWERVKDF----NIPAVLLGS-NHIVSP-------R--------GLR 162 (488)
Q Consensus 103 G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~----~~~~~~~~~-~~~~~~-------~--------~~~ 162 (488)
|++++|++|..+.+++..+++.++++++|++++....+... ....+.+.. ...... . ...
T Consensus 85 G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (546)
T PRK08314 85 NAVVVPVNPMNREEELAHYVTDSGARVAIVGSELAPKVAPAVGNLRLRHVIVAQYSDYLPAEPEIAVPAWLRAEPPLQAL 164 (546)
T ss_pred CcEEeecCcCcCHHHHHHHHHhCCCeEEEEccchhhhHHHHhhccCcceEEEecchhhcccccccCcccccccccccccc
Confidence 99999999999999999999999999999998776655432 122222211 000000 0 000
Q ss_pred CCCCccchHHHHhhcCCCCCCCCCCCCCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHhhhhhhcCCCCcEEEEecc
Q 043601 163 SSSNIVYFDELIELSGNASNFPDVSVKQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTAMDQELAGALDYVTLCVLP 242 (488)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (488)
...+...+++...... ........++++++|+|||||||.||+|.+||.+++... ...........++++++.+|
T Consensus 165 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~--~~~~~~~~~~~~d~~l~~~p 239 (546)
T PRK08314 165 APGGVVAWKEALAAGL---APPPHTAGPDDLAVLPYTSGTTGVPKGCMHTHRTVMANA--VGSVLWSNSTPESVVLAVLP 239 (546)
T ss_pred cccccccHHHHhcccC---CCCCCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHH--HHHHHhhCCCCCceEEEEcC
Confidence 1112334554443221 122334567899999999999999999999999998873 33445566788999999999
Q ss_pred hhhHHhHHHHHHHHhhCCceEEEcCCCCHHHHHHHHHhcCccEEEecHHHHHHHHhcCCccCCCCCCCccEEEEccCCCc
Q 043601 243 MFHVFGLSFVVYAQLQKGNCVVSMRKFDLETALRAIEKYRVTHWWVVPPIILALAKNVSLVKKFDLSSLKGIGSGAAPLR 322 (488)
Q Consensus 243 ~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~v~~~G~~l~ 322 (488)
++|.+|+...++.++..|+++++.+.+++..+++.++++++|++.++|+++..++.. ......+++++|.+++||++++
T Consensus 240 ~~~~~g~~~~~~~~l~~G~~i~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~ll~~-~~~~~~~~~~l~~~~~gG~~~~ 318 (546)
T PRK08314 240 LFHVTGMVHSMNAPIYAGATVVLMPRWDREAAARLIERYRVTHWTNIPTMVVDFLAS-PGLAERDLSSLRYIGGGGAAMP 318 (546)
T ss_pred chHHHHHHHHHHHHHHcCCeEEecCCCCHHHHHHHHHHhcCceecccHHHHHHHHhC-CCccccCchhhheeeeccccCC
Confidence 999999878888999999999999989999999999999999999999999999876 4445567889999999999999
Q ss_pred HHHHHHHHhhCCCCeEEeccCcccccccccccCCCCCCCCCCceeecCCCceEEEEeCCCCCCCCCCCcceEEEecC---
Q 043601 323 KELVEECSKNLPTVTVFQGYGMTETCGVVTVENPLLGVQNSGSTGTLVAGVEAQIVCVDTLKPLPPNQVGELWVRGP--- 399 (488)
Q Consensus 323 ~~~~~~~~~~~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~--- 399 (488)
+++.+++.+.|+ .++++.||+||++......... .....++|.|++++.++++|++++++++.|+.|||+++|+
T Consensus 319 ~~~~~~~~~~~~-~~~~~~YG~tE~~~~~~~~~~~--~~~~~~~G~~~~g~~~~i~d~~~~~~~~~g~~Gel~v~g~~~~ 395 (546)
T PRK08314 319 EAVAERLKELTG-LDYVEGYGLTETMAQTHSNPPD--RPKLQCLGIPTFGVDARVIDPETLEELPPGEVGEIVVHGPQVF 395 (546)
T ss_pred HHHHHHHHHHcC-CcEEecccccccccceecCCCc--CCCCCccCcccCCeEEEEEeCCCCcCCCCCCceEEEEECCchh
Confidence 999999999996 8999999999998765544332 2345789999999999999988899999999999999874
Q ss_pred ---------------------CccccceEEEccCCcEEEEcccCcceeeCcEEe---eHhHHHhcCCCeeeeEEEeecCC
Q 043601 400 ---------------------ILMPGDLGYFDEHGQLFIVDRIKELIKCNGFQV---ELEGVLVSHPEILDAVVIPFPDP 455 (488)
Q Consensus 400 ---------------------~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v---~ie~~l~~~~~v~~~~v~~~~~~ 455 (488)
|++|||+|+++++|.+++.||.||+++++|.+| +||.++.++|+|.+++|++.++.
T Consensus 396 ~gY~~~~~~t~~~f~~~~~~~~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~eIE~~i~~~~~v~~~~v~~~~~~ 475 (546)
T PRK08314 396 KGYWNRPEATAEAFIEIDGKRFFRTGDLGRMDEEGYFFITDRLKRMINASGFKVWPAEVENLLYKHPAIQEACVIATPDP 475 (546)
T ss_pred ccccCChhHhhhhhhhcCCCceEecCCEEEEcCCCcEEEEecchhhEEeCCEEECHHHHHHHHHhCcchheEEEEeCCCc
Confidence 789999999999999999999999999999999 99999999999999999999998
Q ss_pred CCCceEEEEEEeCCCC--CCCHHHHHHHHHhhcC
Q 043601 456 EAGEVPIAYVVRSPNS--SLTKEDVQKFVANDSQ 487 (488)
Q Consensus 456 ~~~~~~~~~v~~~~~~--~~~~~~i~~~~~~~l~ 487 (488)
..++.++++|+++++. ..+.++++++++++|+
T Consensus 476 ~~~~~~~a~v~~~~~~~~~~~~~~l~~~~~~~l~ 509 (546)
T PRK08314 476 RRGETVKAVVVLRPEARGKTTEEEIIAWAREHMA 509 (546)
T ss_pred ccCceeEEEEEECCCCCCCCCHHHHHHHHHHhcc
Confidence 8889999999988763 3556899999999876
No 17
>PRK13382 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.1e-60 Score=486.00 Aligned_cols=442 Identities=23% Similarity=0.322 Sum_probs=370.8
Q ss_pred CCCHHHHHhhccccCCCceEEEeCCCCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHHcCCe
Q 043601 26 NLSMVHFLFRNSASYGSKSALIDADSGESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQFPICLLGVIAIGGI 105 (488)
Q Consensus 26 ~~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~ 105 (488)
++++.+.|.++++++|+++|+++. ++.+||+||+++++++|++|.+.|+++|++|+++++|++++++++|||+++|++
T Consensus 42 ~~~~~~~l~~~a~~~p~~~a~~~~--~~~~Ty~el~~~~~~~A~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~ 119 (537)
T PRK13382 42 GMGPTSGFAIAAQRCPDRPGLIDE--LGTLTWRELDERSDALAAALQALPIGEPRVVGIMCRNHRGFVEALLAANRIGAD 119 (537)
T ss_pred cCCHHHHHHHHHHhCCCCeEEEeC--CCeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEecCcHHHHHHHHHHHHcCcE
Confidence 478999999999999999999986 679999999999999999999999999999999999999999999999999999
Q ss_pred EeecCCCCCHHHHHHHHhhcCCeEEEEccccHHHHhccC--C--CeEEEcccCcccCCCCcCCCCccchHHHHhhcCCCC
Q 043601 106 ATTANPVYTVSELSKQVKDSSPKLVVTVPELWERVKDFN--I--PAVLLGSNHIVSPRGLRSSSNIVYFDELIELSGNAS 181 (488)
Q Consensus 106 ~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (488)
++|+++.++.+++.++++.++++++|++.+....+.... . ....+... .......++.+..... .
T Consensus 120 ~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~--~ 188 (537)
T PRK13382 120 ILLLNTSFAGPALAEVVTREGVDTVIYDEEFSATVDRALADCPQATRIVAWT---------DEDHDLTVEVLIAAHA--G 188 (537)
T ss_pred EEecCcccCHHHHHHHHHhcCCCEEEEchhhHHHHHHHHhhccccceEEEec---------CCcccccHHHHhhccC--c
Confidence 999999999999999999999999999987655443311 0 01111100 0001123333332211 1
Q ss_pred CCCCCCCCCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHhhhhhhcCCCCcEEEEecchhhHHhHHHHHHHHhhCCc
Q 043601 182 NFPDVSVKQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTAMDQELAGALDYVTLCVLPMFHVFGLSFVVYAQLQKGN 261 (488)
Q Consensus 182 ~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~ 261 (488)
. ......++.++++|||||||.||+|+++|.++... ............+++++...|++|.+++ ..++.++..|+
T Consensus 189 ~--~~~~~~~~~~~il~TSGTTG~PKgv~~s~~~~~~~--~~~~~~~~~~~~~~~~l~~~p~~~~~g~-~~~~~~l~~g~ 263 (537)
T PRK13382 189 Q--RPEPTGRKGRVILLTSGTTGTPKGARRSGPGGIGT--LKAILDRTPWRAEEPTVIVAPMFHAWGF-SQLVLAASLAC 263 (537)
T ss_pred C--CCCCCCCCCeEEEECCCCCCCCCEEEeccchHHHH--HHHHHHhhCCCCCCeEEEecChHhhhHH-HHHHHHHhcCc
Confidence 1 11234678899999999999999999999888765 2224444556788899999999999998 67888899999
Q ss_pred eEEEcCCCCHHHHHHHHHhcCccEEEecHHHHHHHHhcCCc-cCCCCCCCccEEEEccCCCcHHHHHHHHhhCCCCeEEe
Q 043601 262 CVVSMRKFDLETALRAIEKYRVTHWWVVPPIILALAKNVSL-VKKFDLSSLKGIGSGAAPLRKELVEECSKNLPTVTVFQ 340 (488)
Q Consensus 262 ~~~~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~-~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~i~~ 340 (488)
++++...+++..+++.|+++++|++.++|+++..+++.... ....+++++|.+++||+++++++++.|.+.++ ..+++
T Consensus 264 ~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~-~~i~~ 342 (537)
T PRK13382 264 TIVTRRRFDPEATLDLIDRHRATGLAVVPVMFDRIMDLPAEVRNRYSGRSLRFAAASGSRMRPDVVIAFMDQFG-DVIYN 342 (537)
T ss_pred EEEECCCcCHHHHHHHHHHhCCEEEEehHHHHHHHHcCCchhcccCCccceeEEEEcCCCCCHHHHHHHHHHcC-CcEEe
Confidence 99998889999999999999999999999999999875211 12345678999999999999999999999997 78999
Q ss_pred ccCcccccccccccCCCCCCCCCCceeecCCCceEEEEeCCCCCCCCCCCcceEEEecC-----------------Cccc
Q 043601 341 GYGMTETCGVVTVENPLLGVQNSGSTGTLVAGVEAQIVCVDTLKPLPPNQVGELWVRGP-----------------ILMP 403 (488)
Q Consensus 341 ~YG~tE~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~-----------------~~~t 403 (488)
.||+||++.+++.... ......+++|+|++++.++++| +++++++.|+.|||+++|+ |+.|
T Consensus 343 ~YG~TE~~~~~~~~~~-~~~~~~~~vG~p~~~~~~~i~d-~~~~~~~~g~~GEl~v~g~~~~~gY~~~~~~~~~~g~~~T 420 (537)
T PRK13382 343 NYNATEAGMIATATPA-DLRAAPDTAGRPAEGTEIRILD-QDFREVPTGEVGTIFVRNDTQFDGYTSGSTKDFHDGFMAS 420 (537)
T ss_pred cccccccCcceecChh-HhccCCCCccccCcCcEEEEEC-CCCCCCCCCCeeEEEEEcCCcccCccccchhhccCCCEee
Confidence 9999999876554332 1234567899999999999999 5789999999999999985 6789
Q ss_pred cceEEEccCCcEEEEcccCcceeeCcEEe---eHhHHHhcCCCeeeeEEEeecCCCCCceEEEEEEeCCCCCCCHHHHHH
Q 043601 404 GDLGYFDEHGQLFIVDRIKELIKCNGFQV---ELEGVLVSHPEILDAVVIPFPDPEAGEVPIAYVVRSPNSSLTKEDVQK 480 (488)
Q Consensus 404 GD~~~~~~~g~l~~~GR~~d~i~~~G~~v---~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~ 480 (488)
||+++++++|++++.||++|+||.+|++| +||.++.++|+|.+++|++.+++..++.++++|++.++...+.+++++
T Consensus 421 GDl~~~~~~g~l~~~GR~dd~ik~~G~~v~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~~~~a~vv~~~~~~~~~~~l~~ 500 (537)
T PRK13382 421 GDVGYLDENGRLFVVGRDDEMIVSGGENVYPIEVEKTLATHPDVAEAAVIGVDDEQYGQRLAAFVVLKPGASATPETLKQ 500 (537)
T ss_pred CceEEEeCCCcEEEeccccceeEECCEEECHHHHHHHHHhCCCEeeEEEEccCccccCCEEEEEEEECCCCCCCHHHHHH
Confidence 99999999999999999999999999999 999999999999999999999888889999999998877778899999
Q ss_pred HHHhhcCC
Q 043601 481 FVANDSQL 488 (488)
Q Consensus 481 ~~~~~l~~ 488 (488)
+++++|+.
T Consensus 501 ~l~~~l~~ 508 (537)
T PRK13382 501 HVRDNLAN 508 (537)
T ss_pred HHHHhccC
Confidence 99998863
No 18
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=100.00 E-value=5.3e-61 Score=491.02 Aligned_cols=448 Identities=26% Similarity=0.346 Sum_probs=359.7
Q ss_pred CCCHHHHHhhccccCCCceEEEeCCCCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHHcCCe
Q 043601 26 NLSMVHFLFRNSASYGSKSALIDADSGESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQFPICLLGVIAIGGI 105 (488)
Q Consensus 26 ~~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~ 105 (488)
+.|+.++|.++++++|+++|+++. ++.+||+||+++++++|++|.++|+++||+|+++++|++++++++|||+++|++
T Consensus 6 ~~~~~~~~~~~~~~~p~~~a~~~~--~~~~Ty~el~~~~~~la~~L~~~Gv~~gd~V~v~~~n~~~~~~~~la~~~~Gav 83 (563)
T PLN02860 6 QAHICQCLTRLATLRGNAVVTISG--NRRRTGHEFVDGVLSLAAGLLRLGLRNGDVVAIAALNSDLYLEWLLAVACAGGI 83 (563)
T ss_pred hhHHHHHHHHHHHhcCCceEEecC--CceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHhhccEE
Confidence 578999999999999999999876 689999999999999999999999999999999999999999999999999999
Q ss_pred EeecCCCCCHHHHHHHHhhcCCeEEEEccccHHHHhcc---CC---CeEEEcccCcccCCCCcCCCCccchHHHHhhcCC
Q 043601 106 ATTANPVYTVSELSKQVKDSSPKLVVTVPELWERVKDF---NI---PAVLLGSNHIVSPRGLRSSSNIVYFDELIELSGN 179 (488)
Q Consensus 106 ~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~---~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (488)
++|+++.++.+++..+++.+++++++++++........ .. ..+++..+... ............+++......
T Consensus 84 ~vpl~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 161 (563)
T PLN02860 84 VAPLNYRWSFEEAKSAMLLVRPVMLVTDETCSSWYEELQNDRLPSLMWQVFLESPSS--SVFIFLNSFLTTEMLKQRALG 161 (563)
T ss_pred EEeCCcccCHHHHHHHHHhcCceEEEEecccchHHHHHhhccCCceeEEEEecCccc--ccccchhhccccchhccCccc
Confidence 99999999999999999999999999987643222111 11 11111111000 000000011111211111000
Q ss_pred CCCCCCCCCCCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHhhhhhhcCCCCcEEEEecchhhHHhHHHHHHHHhhC
Q 043601 180 ASNFPDVSVKQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTAMDQELAGALDYVTLCVLPMFHVFGLSFVVYAQLQK 259 (488)
Q Consensus 180 ~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 259 (488)
.........++++++++|||||||.||+|+++|.++..+... ....+...++++++...|++|..++ ..++.++..
T Consensus 162 -~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~--~~~~~~~~~~d~~l~~~pl~h~~g~-~~~~~~l~~ 237 (563)
T PLN02860 162 -TTELDYAWAPDDAVLICFTSGTTGRPKGVTISHSALIVQSLA--KIAIVGYGEDDVYLHTAPLCHIGGL-SSALAMLMV 237 (563)
T ss_pred -cccccCCCCCCCeEEEEecCCCCCCCceEEeehHHHHHHHHH--HHhhcCCCCCCEEEEecCchhhccH-HHHHHHHHc
Confidence 011112346789999999999999999999999999876322 3344567788999999999999998 677889999
Q ss_pred CceEEEcCCCCHHHHHHHHHhcCccEEEecHHHHHHHHhcCCc-cCCCCCCCccEEEEccCCCcHHHHHHHHhhCCCCeE
Q 043601 260 GNCVVSMRKFDLETALRAIEKYRVTHWWVVPPIILALAKNVSL-VKKFDLSSLKGIGSGAAPLRKELVEECSKNLPTVTV 338 (488)
Q Consensus 260 G~~~~~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~-~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~i 338 (488)
|+++++.+.+++..+++.++++++|++.++|+++..+++.... .....+++||.+++||+++++++.+.|.+.|++..+
T Consensus 238 G~~~v~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~~~~gG~~l~~~~~~~~~~~~~~~~~ 317 (563)
T PLN02860 238 GACHVLLPKFDAKAALQAIKQHNVTSMITVPAMMADLISLTRKSMTWKVFPSVRKILNGGGSLSSRLLPDAKKLFPNAKL 317 (563)
T ss_pred CceEEecCCCCHHHHHHHHHHhCCeeEEeChHHHHHHHHhhhhhhccccccceeEEEeCCCcCCHHHHHHHHHhcCCCce
Confidence 9999999889999999999999999999999999999875211 123567899999999999999999999999977999
Q ss_pred EeccCcccccccccccCCCC---------------------CCCCCCceeecCCCceEEEEeCCCCCCCCCCCcceEEEe
Q 043601 339 FQGYGMTETCGVVTVENPLL---------------------GVQNSGSTGTLVAGVEAQIVCVDTLKPLPPNQVGELWVR 397 (488)
Q Consensus 339 ~~~YG~tE~~~~~~~~~~~~---------------------~~~~~~~~g~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~ 397 (488)
++.||+||+++.++...... ......++|+|++++++++++.+ .|+.|||+++
T Consensus 318 ~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~~~~v~i~~~~------~g~~Gel~v~ 391 (563)
T PLN02860 318 FSAYGMTEACSSLTFMTLHDPTLESPKQTLQTVNQTKSSSVHQPQGVCVGKPAPHVELKIGLDE------SSRVGRILTR 391 (563)
T ss_pred ecCCCccccCcccccccccccccccchhhhhhhcccccccccccCCcccCCccCCcEEEEecCC------CCceeEEEEe
Confidence 99999999976554322110 01122368999999999999853 5888999998
Q ss_pred cC---------------------CccccceEEEccCCcEEEEcccCcceeeCcEEe---eHhHHHhcCCCeeeeEEEeec
Q 043601 398 GP---------------------ILMPGDLGYFDEHGQLFIVDRIKELIKCNGFQV---ELEGVLVSHPEILDAVVIPFP 453 (488)
Q Consensus 398 g~---------------------~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v---~ie~~l~~~~~v~~~~v~~~~ 453 (488)
|+ |++|||+|++++||++++.||++|+||.+|++| +||+++.++|+|.+++|++.+
T Consensus 392 g~~~~~GY~~~~~~t~~~~~~~g~~~TGDl~~~d~dG~l~~~GR~~d~i~~~G~~v~p~eIE~~l~~~p~V~~~~v~~~~ 471 (563)
T PLN02860 392 GPHVMLGYWGQNSETASVLSNDGWLDTGDIGWIDKAGNLWLIGRSNDRIKTGGENVYPEEVEAVLSQHPGVASVVVVGVP 471 (563)
T ss_pred cCcccccccCCccccchhccCCCeEEccceEEEcCCCCEEEeecccceeEECCEEccHHHHHHHHHhCCCcceeEEEEEe
Confidence 85 578999999999999999999999999999999 999999999999999999999
Q ss_pred CCCCCceEEEEEEeCCCC--------------CCCHHHHHHHHHh-hcC
Q 043601 454 DPEAGEVPIAYVVRSPNS--------------SLTKEDVQKFVAN-DSQ 487 (488)
Q Consensus 454 ~~~~~~~~~~~v~~~~~~--------------~~~~~~i~~~~~~-~l~ 487 (488)
+...++.++++|+++++. ..+.+++++++++ +|+
T Consensus 472 ~~~~~~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~ 520 (563)
T PLN02860 472 DSRLTEMVVACVRLRDGWIWSDNEKENAKKNLTLSSETLRHHCREKNLS 520 (563)
T ss_pred cCcCCceEEEEEEECCccccccccchhhcccccccHHHHHHHHhhCccc
Confidence 988899999999988652 3567889999987 365
No 19
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=7.4e-61 Score=494.17 Aligned_cols=434 Identities=21% Similarity=0.306 Sum_probs=340.8
Q ss_pred CCCHHHHHhhccccCCCceEEEeCCCC---cceeHHHHHHHHHHHHHHHHHc---CCCCC-----------CEEEEEcCC
Q 043601 26 NLSMVHFLFRNSASYGSKSALIDADSG---ESLTFSQFKSIVIKVSHGFRHL---GVTKH-----------DVVLIFAPN 88 (488)
Q Consensus 26 ~~~l~~~l~~~a~~~p~~~a~~~~~~~---~~~Ty~el~~~~~~la~~L~~~---g~~~g-----------~~V~i~~~n 88 (488)
-.|+.++|.++++++|+++|+++...+ +++||+||.++++++|++|.+. |+++| |+|+|+++|
T Consensus 60 ~~~l~~~l~~~~~~~p~~~Al~~~~~g~~~~~~Ty~el~~~v~~~A~~L~~~~~~Gv~~g~~~~~~~~g~~d~V~i~~~N 139 (746)
T PTZ00342 60 YKHIMKLLLEKYKLNNNKIAIVEHSCGEPQNYITYGNFFKKVLSFSHSLNTYEGKGIPEKKYNEEQNNGKFKLLGLYGSN 139 (746)
T ss_pred cchHHHHHHHHHhhcCCceeEeccCCCCCceeeeHHHHHHHHHHHHHHHHHHhhcCCCcCccccccccccccEEEEEcCC
Confidence 479999999999999999999874222 6899999999999999999974 99998 999999999
Q ss_pred CcchHHHHHHHHHcCCeEeecCCCCCHHHHHHHHhhcCCeEEEEccccHHHHhccC-----CCeEEEcccCccc-C----
Q 043601 89 SIQFPICLLGVIAIGGIATTANPVYTVSELSKQVKDSSPKLVVTVPELWERVKDFN-----IPAVLLGSNHIVS-P---- 158 (488)
Q Consensus 89 ~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~-----~~~~~~~~~~~~~-~---- 158 (488)
+++|+++++||+++|++.||+++.++.+++.+++++++++++|++.+....+.... .+.+++....... .
T Consensus 140 ~~ew~~~~lA~~~~Gav~Vpl~~~~~~~el~~il~~s~~~~lv~~~~~~~~l~~~~~~~~~l~~ii~~~~~~~~~~~~~~ 219 (746)
T PTZ00342 140 SINWLVADLACMLSGVTTLVMHSKFSIDVIVDILNETKLEWLCLDLDLVEGLLERKNELPHLKKLIILDTLIKSKEININ 219 (746)
T ss_pred CHHHHHHHHHHHHcCCeEEEecCCCCHHHHHHHHhcCCCCEEEEcHHHHHHHHHhhccCCCceEEEEECCCCcccccccc
Confidence 99999999999999999999999999999999999999999999877666554321 2222222111000 0
Q ss_pred ------------CCC------------------------------------------cCCCCccchHHHHhhcCCCCCCC
Q 043601 159 ------------RGL------------------------------------------RSSSNIVYFDELIELSGNASNFP 184 (488)
Q Consensus 159 ------------~~~------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~ 184 (488)
... ........++++..... ....
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~--~~~~ 297 (746)
T PTZ00342 220 KEEKNNGSNVNNNGNKNNKEEQKGNDLSNELEDISLGPLEYDKEKLEKIKDLKEKAKKLGISIILFDDMTKNKT--TNYK 297 (746)
T ss_pred cccccccccccccccccccccccccccccccccccccccccchhhhhhhHHHHHHhhcCCCEEEEHHHHHhhcc--cCCC
Confidence 000 00000111222222111 1122
Q ss_pred CCCCCCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHhhhhhhcCCCCcEEEEecchhhHHhHHHHHHHHhhCCceEE
Q 043601 185 DVSVKQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTAMDQELAGALDYVTLCVLPMFHVFGLSFVVYAQLQKGNCVV 264 (488)
Q Consensus 185 ~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~ 264 (488)
.....++++++|+|||||||.||||++||+++.+.+..............+++++.+|++|.+++ ...+.+++.|++++
T Consensus 298 ~~~~~~dd~a~IiYTSGTTG~PKGVmlTH~nl~~~~~~~~~~~~~~~~~~d~~ls~LPL~Hi~~~-~~~~~~l~~G~~i~ 376 (746)
T PTZ00342 298 IQNEDPDFITSIVYTSGTSGKPKGVMLSNKNLYNTVVPLCKHSIFKKYNPKTHLSYLPISHIYER-VIAYLSFMLGGTIN 376 (746)
T ss_pred CCCCCccceEEEEEcCCCCCCCCEEEEccHHHHHHHHHHhhcccccCCCCCeEEEeCcHHHHHHH-HHHHHHHHcCCEEE
Confidence 23456799999999999999999999999999887432211111112355889999999999998 45677899999999
Q ss_pred EcCCCCHHHHHHHHHhcCccEEEecHHHHHHHHhcC-------CccCC--------------------------------
Q 043601 265 SMRKFDLETALRAIEKYRVTHWWVVPPIILALAKNV-------SLVKK-------------------------------- 305 (488)
Q Consensus 265 ~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~-------~~~~~-------------------------------- 305 (488)
+.+. ++..+++.|++++||+++++|.+++.+.... +....
T Consensus 377 ~~~~-~~~~l~~di~~~~pT~~~~VP~v~~~i~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~v~~ki 455 (746)
T PTZ00342 377 IWSK-DINYFSKDIYNSKGNILAGVPKVFNRIYTNIMTEINNLPPLKRFLVKKILSLRKSNNNGGFSKFLEGITHISSKI 455 (746)
T ss_pred EeCC-CHHHHHHHHHHhCCcEEEchHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhhcCCcchHHHHHHHHHHHH
Confidence 8765 8999999999999999999999999987521 10000
Q ss_pred --CCCCCccEEEEccCCCcHHHHHHHHhhCCCCeEEeccCcccccccccccCCCCCCCCCCceeecC-CCceEEEEeCCC
Q 043601 306 --FDLSSLKGIGSGAAPLRKELVEECSKNLPTVTVFQGYGMTETCGVVTVENPLLGVQNSGSTGTLV-AGVEAQIVCVDT 382 (488)
Q Consensus 306 --~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~i~d~~~ 382 (488)
...++||.+++||+++++++.+.|.+.++ +.+.+.||+||+++.++...+. ....+++|+|+ |+++++|+|.++
T Consensus 456 r~~lg~~lr~~~sGGapl~~~~~~~~~~~~g-~~i~~gYGlTEt~~~~~~~~~~--~~~~gsvG~p~~pg~e~ki~d~~~ 532 (746)
T PTZ00342 456 KDKVNPNLEVILNGGGKLSPKIAEELSVLLN-VNYYQGYGLTETTGPIFVQHAD--DNNTESIGGPISPNTKYKVRTWET 532 (746)
T ss_pred HHhhCCCeEEEEEcCCCCCHHHHHHHHHhcC-CCEEEeeccCcccceeeeccCC--CCCcccccCcCCCcEEEEEecccc
Confidence 01268999999999999999999999886 8999999999998766655443 45778999998 999999998655
Q ss_pred CCCCCCCCcceEEEecC---------------------CccccceEEEccCCcEEEEcccCcceee-CcEEe---eHhHH
Q 043601 383 LKPLPPNQVGELWVRGP---------------------ILMPGDLGYFDEHGQLFIVDRIKELIKC-NGFQV---ELEGV 437 (488)
Q Consensus 383 ~~~~~~g~~Gel~v~g~---------------------~~~tGD~~~~~~~g~l~~~GR~~d~i~~-~G~~v---~ie~~ 437 (488)
+.....+..|||+++|+ |++|||+|++|+||++++.||++|+||. +|++| +||++
T Consensus 533 ~~~~~~~~~GEl~vrGp~v~~GY~~~pe~T~~~f~~dGW~~TGDig~~d~dG~l~i~gR~kdlIkls~Ge~I~p~eIE~~ 612 (746)
T PTZ00342 533 YKATDTLPKGELLIKSDSIFSGYFLEKEQTKNAFTEDGYFKTGDIVQINKNGSLTFLDRSKGLVKLSQGEYIETDMLNNL 612 (746)
T ss_pred cccCCCCCceEEEEecCcccccccCChhhhhhhcCcCCcccCCcEEEECCCCeEEEEccCCCeEEeCCCEEEchHHHHHH
Confidence 55555566799999985 7899999999999999999999999996 79999 99999
Q ss_pred HhcCCCeeeeEEEeecCCCCCceEEEEEEeCC
Q 043601 438 LVSHPEILDAVVIPFPDPEAGEVPIAYVVRSP 469 (488)
Q Consensus 438 l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~ 469 (488)
+.++|.|.+++|++.... ..++|+|++.+
T Consensus 613 l~~~p~V~~~~VvG~~~~---~~~~Alvv~d~ 641 (746)
T PTZ00342 613 YSQISFINFCVVYGDDSM---DGPLAIISVDK 641 (746)
T ss_pred HhcCCCccEEEEEccCCc---cccEEEEECCH
Confidence 999999999999986432 36889998753
No 20
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=100.00 E-value=1.4e-60 Score=486.86 Aligned_cols=445 Identities=26% Similarity=0.368 Sum_probs=372.3
Q ss_pred CCHHHHHhhccccCCCceEEEeCCC----CcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHHc
Q 043601 27 LSMVHFLFRNSASYGSKSALIDADS----GESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQFPICLLGVIAI 102 (488)
Q Consensus 27 ~~l~~~l~~~a~~~p~~~a~~~~~~----~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~ 102 (488)
.++.++|.+.++.+|+++|+++.+. .+.+||+||+++++++|++|.+.|+++|++|+++++|++++++++|||+++
T Consensus 24 ~~l~~~l~~~a~~~p~~~A~~~~~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~Val~~~n~~e~~~~~la~~~~ 103 (547)
T PRK13295 24 RTINDDLDACVASCPDKTAVTAVRLGTGAPRRFTYRELAALVDRVAVGLARLGVGRGDVVSCQLPNWWEFTVLYLACSRI 103 (547)
T ss_pred CCHHHHHHHHHHHCCCceEEEecCCCccccceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHHHHHHHHHHhc
Confidence 6899999999999999999987531 279999999999999999999999999999999999999999999999999
Q ss_pred CCeEeecCCCCCHHHHHHHHhhcCCeEEEEccccH-----HHHhcc-----CCCeEEEcccCcccCCCCcCCCCccchHH
Q 043601 103 GGIATTANPVYTVSELSKQVKDSSPKLVVTVPELW-----ERVKDF-----NIPAVLLGSNHIVSPRGLRSSSNIVYFDE 172 (488)
Q Consensus 103 G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~-----~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (488)
|++++|++|.++.+++..+++.+++++++++++.. ..+... ....+..... ....++.+
T Consensus 104 G~~~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~ 172 (547)
T PRK13295 104 GAVLNPLMPIFRERELSFMLKHAESKVLVVPKTFRGFDHAAMARRLRPELPALRHVVVVGG-----------DGADSFEA 172 (547)
T ss_pred CcEEeccccccCHHHHHHHHHhcCceEEEEeccccCcchHHHHHHHhhhCCCcceEEEecC-----------CCccCHHH
Confidence 99999999999999999999999999999987531 111111 1112221111 01123333
Q ss_pred HHhhcCC------CCCCCCCCCCCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHhhhhhhcCCCCcEEEEecchhhH
Q 043601 173 LIELSGN------ASNFPDVSVKQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTAMDQELAGALDYVTLCVLPMFHV 246 (488)
Q Consensus 173 ~~~~~~~------~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (488)
++..... ...........+++++++|||||||.||+|+++|.++..... .....+...+++++++..|++|.
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~--~~~~~~~~~~~~~~l~~~p~~h~ 250 (547)
T PRK13295 173 LLITPAWEQEPDAPAILARLRPGPDDVTQLIYTSGTTGEPKGVMHTANTLMANIV--PYAERLGLGADDVILMASPMAHQ 250 (547)
T ss_pred HhhCCccccccccccccccCCCCCcceeEEEeCCCCCCCCCEEEeccHHHHHHHH--HHHHHhCCCCCCeEEEecCchhh
Confidence 3321100 011112234678999999999999999999999999987633 34455667889999999999999
Q ss_pred HhHHHHHHHHhhCCceEEEcCCCCHHHHHHHHHhcCccEEEecHHHHHHHHhcCCccCCCCCCCccEEEEccCCCcHHHH
Q 043601 247 FGLSFVVYAQLQKGNCVVSMRKFDLETALRAIEKYRVTHWWVVPPIILALAKNVSLVKKFDLSSLKGIGSGAAPLRKELV 326 (488)
Q Consensus 247 ~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~ 326 (488)
.++...++.++..|+++++.+.+++..+++.++++++|++.++|+++..+... .......+++||.+++||+++++++.
T Consensus 251 ~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~vt~~~~~p~~~~~l~~~-~~~~~~~~~~l~~~~~~G~~l~~~~~ 329 (547)
T PRK13295 251 TGFMYGLMMPVMLGATAVLQDIWDPARAAELIRTEGVTFTMASTPFLTDLTRA-VKESGRPVSSLRTFLCAGAPIPGALV 329 (547)
T ss_pred hhHHHHHHHHHHcCCeEEeCCCCCHHHHHHHHHHcCCcEEEecHHHHHHHHhc-ccccCCCcccceEEEEecCCCCHHHH
Confidence 99878889999999999999888999999999999999999999999999887 44455678899999999999999999
Q ss_pred HHHHhhCCCCeEEeccCcccccccccccCCCCCCCCCCceeecCCCceEEEEeCCCCCCCCCCCcceEEEecC-------
Q 043601 327 EECSKNLPTVTVFQGYGMTETCGVVTVENPLLGVQNSGSTGTLVAGVEAQIVCVDTLKPLPPNQVGELWVRGP------- 399 (488)
Q Consensus 327 ~~~~~~~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~------- 399 (488)
+.+.+.++ +++++.||+||++.+.+............++|+|++++.++|+| +++++++.|+.|||+|+|+
T Consensus 330 ~~~~~~~~-~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~i~d-~~~~~~~~g~~Gel~v~g~~~~~gY~ 407 (547)
T PRK13295 330 ERARAALG-AKIVSAWGMTENGAVTLTKLDDPDERASTTDGCPLPGVEVRVVD-ADGAPLPAGQIGRLQVRGCSNFGGYL 407 (547)
T ss_pred HHHHHHhC-CCeEEeccCCCCCCeeeccCCCcchhccCccccccCCcEEEEEC-CCCCCCCCCCCCeEEEEcCccccccc
Confidence 99999995 99999999999987655443222223456789999999999999 5789999999999999985
Q ss_pred ------------CccccceEEEccCCcEEEEcccCcceeeCcEEe---eHhHHHhcCCCeeeeEEEeecCCCCCceEEEE
Q 043601 400 ------------ILMPGDLGYFDEHGQLFIVDRIKELIKCNGFQV---ELEGVLVSHPEILDAVVIPFPDPEAGEVPIAY 464 (488)
Q Consensus 400 ------------~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v---~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~ 464 (488)
||.|||+|+++++|.+++.||.+|+++.+|.+| +||.++.++++|.+++|++.+++..++.++++
T Consensus 408 ~~~~~t~~~~~g~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~p~~IE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~ 487 (547)
T PRK13295 408 KRPQLNGTDADGWFDTGDLARIDADGYIRISGRSKDVIIRGGENIPVVEIEALLYRHPAIAQVAIVAYPDERLGERACAF 487 (547)
T ss_pred CCccccccCCCCCeecceEEEEcCCceEEEEeccCCeEEECCEEECHHHHHHHHHhCCCeeeEEEEeeecCCCCcEEEEE
Confidence 589999999999999999999999999999999 99999999999999999999988888999999
Q ss_pred EEeCCCCCCCHHHHHHHHHh-hcC
Q 043601 465 VVRSPNSSLTKEDVQKFVAN-DSQ 487 (488)
Q Consensus 465 v~~~~~~~~~~~~i~~~~~~-~l~ 487 (488)
|+++++...+.+++++++++ +|+
T Consensus 488 v~~~~~~~~~~~~l~~~~~~~~l~ 511 (547)
T PRK13295 488 VVPRPGQSLDFEEMVEFLKAQKVA 511 (547)
T ss_pred EEeCCCCCCCHHHHHHHHHhccCc
Confidence 99988777788899999986 454
No 21
>PLN03052 acetate--CoA ligase; Provisional
Probab=100.00 E-value=3e-60 Score=492.98 Aligned_cols=452 Identities=21% Similarity=0.235 Sum_probs=356.6
Q ss_pred CCCHHHH-HhhccccCCCceEEEeCCCC------cceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHH
Q 043601 26 NLSMVHF-LFRNSASYGSKSALIDADSG------ESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQFPICLLG 98 (488)
Q Consensus 26 ~~~l~~~-l~~~a~~~p~~~a~~~~~~~------~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA 98 (488)
.+|+.+. |.+++..+|+++|+++.+.+ +++||+||.++++++|+.|+++|+++||+|+++++|++++++++||
T Consensus 173 ~ln~~~~~l~~~~~~~pd~~Ai~~~~e~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrVai~~pn~~e~via~LA 252 (728)
T PLN03052 173 VLNVAECCLTPKPSKTDDSIAIIWRDEGSDDLPVNRMTLSELRSQVSRVANALDALGFEKGDAIAIDMPMNVHAVIIYLA 252 (728)
T ss_pred EeEHHHHHHHHHhccCCCCeEEEEECCCCCCCceEEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHH
Confidence 4677664 44555678999999875422 4899999999999999999999999999999999999999999999
Q ss_pred HHHcCCeEeecCCCCCHHHHHHHHhhcCCeEEEEccccHH---------HHhcc-CCCeEEEcccCcccCCCCcCCCCcc
Q 043601 99 VIAIGGIATTANPVYTVSELSKQVKDSSPKLVVTVPELWE---------RVKDF-NIPAVLLGSNHIVSPRGLRSSSNIV 168 (488)
Q Consensus 99 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~---------~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (488)
|+++|++++|++|.++.+++..++++++++++|+++.... .+... ....+.+....... .........
T Consensus 253 ~~~~Gav~vpi~p~~~~~~l~~rl~~~~~k~lit~d~~~~~gk~~~~~~~~~~~~~~~~iv~~~~~~~~--~~~~~~~~~ 330 (728)
T PLN03052 253 IILAGCVVVSIADSFAPSEIATRLKISKAKAIFTQDVIVRGGKSIPLYSRVVEAKAPKAIVLPADGKSV--RVKLREGDM 330 (728)
T ss_pred HHHcCCEEEeeCCCCCHHHHHHHHHhcCceEEEEcCccccCCcccchHHHHHHhcCCcEEEEeCCCCcc--ccccccCCc
Confidence 9999999999999999999999999999999999875432 11111 11222222111000 000011233
Q ss_pred chHHHHhhcCC---CCCCCCCCCCCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHhhhhhhcCCCCcEEEEecchhh
Q 043601 169 YFDELIELSGN---ASNFPDVSVKQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTAMDQELAGALDYVTLCVLPMFH 245 (488)
Q Consensus 169 ~~~~~~~~~~~---~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (488)
++++++..... ...........+++++|+|||||||.||+|+++|.+++..... ........++|++++.+++.|
T Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~IlyTSGTTG~PKgVv~sh~~~l~~~~~--~~~~~~l~~~d~~~~~~~l~w 408 (728)
T PLN03052 331 SWDDFLARANGLRRPDEYKAVEQPVEAFTNILFSSGTTGEPKAIPWTQLTPLRAAAD--AWAHLDIRKGDIVCWPTNLGW 408 (728)
T ss_pred cHHHHHhccccccccccccccccCCCCcEEEEecCCCCCCCceEEECchHHHHHHHH--HHHhcCCCCCcEEEECCCcHH
Confidence 56666543210 0111122235689999999999999999999999987665322 222356678899999999999
Q ss_pred HHhHHHHHHHHhhCCceEEEcCC-CCHHHHHHHHHhcCccEEEecHHHHHHHHhcCCccCCCCCCCccEEEEccCCCcHH
Q 043601 246 VFGLSFVVYAQLQKGNCVVSMRK-FDLETALRAIEKYRVTHWWVVPPIILALAKNVSLVKKFDLSSLKGIGSGAAPLRKE 324 (488)
Q Consensus 246 ~~~~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~v~~~G~~l~~~ 324 (488)
+.+. +.++.+|..|+++++.++ .++..+++.++++++|++.++|+++..+.+. ......++++||.++++||+++++
T Consensus 409 ~~g~-~~v~~~L~~Gat~vl~~g~p~~~~~~~~i~~~~vT~l~~~Pt~l~~l~~~-~~~~~~dlssLr~i~s~Ge~l~~~ 486 (728)
T PLN03052 409 MMGP-WLVYASLLNGATLALYNGSPLGRGFAKFVQDAKVTMLGTVPSIVKTWKNT-NCMAGLDWSSIRCFGSTGEASSVD 486 (728)
T ss_pred HhHH-HHHHHHHHhCCEEEEeCCCCCCChHHHHHHHHCCCEEEECHHHHHHHHhc-CCcccCChhheeEEEecCCCCCHH
Confidence 9998 677899999999999865 4567899999999999999999999998876 434567889999999999999999
Q ss_pred HHHHHHhhCCCCeEEeccCcccccccccccCCCCCCCCCCceeecCCCceEEEEeCCCCCCCCCCC--cceEEEecC---
Q 043601 325 LVEECSKNLPTVTVFQGYGMTETCGVVTVENPLLGVQNSGSTGTLVAGVEAQIVCVDTLKPLPPNQ--VGELWVRGP--- 399 (488)
Q Consensus 325 ~~~~~~~~~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d~~~~~~~~~g~--~Gel~v~g~--- 399 (488)
....+.+.++...+.+.||+||+++.+....+. .....+++|.|.+|++++|+| ++|++++.|+ .|||++.++
T Consensus 487 ~~~~~~~~~~~~~i~~~yG~TE~~~~~~~~~~~-~~~~~g~~g~p~~g~~v~v~d-~~g~~v~~g~~~~GEL~v~~~~~~ 564 (728)
T PLN03052 487 DYLWLMSRAGYKPIIEYCGGTELGGGFVTGSLL-QPQAFAAFSTPAMGCKLFILD-DSGNPYPDDAPCTGELALFPLMFG 564 (728)
T ss_pred HHHHHHHhcCCCCeEeeccChhhCcccccCCCC-CCCCCCccccCCCCceEEEEC-CCCCCCCCCCCceEEEEEeCCCCC
Confidence 988888877645789999999997654433322 134567899999999999999 6899999885 599999643
Q ss_pred -------------------------CccccceEEEccCCcEEEEcccCcceeeCcEEe---eHhHHHh-cCCCeeeeEEE
Q 043601 400 -------------------------ILMPGDLGYFDEHGQLFIVDRIKELIKCNGFQV---ELEGVLV-SHPEILDAVVI 450 (488)
Q Consensus 400 -------------------------~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v---~ie~~l~-~~~~v~~~~v~ 450 (488)
+++|||++++++||+++++||+||+||++|++| |||+++. .||.|.|++|+
T Consensus 565 ~~~~~~~~~~~~~yf~~~p~~~g~~~~~tGDl~~~d~dG~l~i~GR~Dd~I~~~G~rI~~~EIE~~l~~~~p~V~eaaVv 644 (728)
T PLN03052 565 ASSTLLNADHYKVYFKGMPVFNGKILRRHGDIFERTSGGYYRAHGRADDTMNLGGIKVSSVEIERVCNAADESVLETAAI 644 (728)
T ss_pred CCccccCchhhhhhhhcCCCCCCCEEEecCceEEECCCCeEEEEecCCCEEeeCCEEeCHHHHHHHHHhcCCCcceEEEE
Confidence 368999999999999999999999999999999 9999995 78999999999
Q ss_pred eecCCCCC-ceEEEEEEeC--CCCCCCHHHHHHHHHhh
Q 043601 451 PFPDPEAG-EVPIAYVVRS--PNSSLTKEDVQKFVAND 485 (488)
Q Consensus 451 ~~~~~~~~-~~~~~~v~~~--~~~~~~~~~i~~~~~~~ 485 (488)
+.+++..+ +.++++|+++ ++...+.++|++++++.
T Consensus 645 g~~d~~~g~e~~~afVvl~~~~g~~~~~~~L~~~i~~~ 682 (728)
T PLN03052 645 GVPPPGGGPEQLVIAAVLKDPPGSNPDLNELKKIFNSA 682 (728)
T ss_pred eeecCCCCcEEEEEEEEEecCCCCCCCHHHHHHHHHHH
Confidence 99987665 8899999998 66666777777765543
No 22
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=100.00 E-value=2.2e-60 Score=482.98 Aligned_cols=434 Identities=22% Similarity=0.294 Sum_probs=353.0
Q ss_pred CCHHHHHhhccccCCCceEEEeCCCCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHHcCCeE
Q 043601 27 LSMVHFLFRNSASYGSKSALIDADSGESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQFPICLLGVIAIGGIA 106 (488)
Q Consensus 27 ~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~ 106 (488)
.++.+.|.+.++++|+++|+.+.. ++++||+||.++++++|+.|.+. +||+|+++++|++++++++|||+++|+++
T Consensus 19 ~~~~~~~~~~~~~~p~~~a~~~~~-~~~~Ty~el~~~~~~lA~~L~~~---~gd~Val~~~n~~e~~~~~lA~~~~G~v~ 94 (539)
T PRK06334 19 KTVLESFLKLCSEMTTATVCWDEQ-LGKLSYNQVRKAVIALATKVSKY---PDQHIGIMMPASAGAYIAYFATLLSGKIP 94 (539)
T ss_pred CcHHHHHHHHHHhCCCceEEEeCC-CCcccHHHHHHHHHHHHHHHhhc---cCCeEEEEcCCchHHHHHHHHHHhcCCee
Confidence 679999999999999999998753 36899999999999999999873 89999999999999999999999999999
Q ss_pred eecCCCCCHHHHHHHHhhcCCeEEEEccccHHHHhccCC-------CeEEEcccCcccCCCCcCCCCccchHHHHhhc--
Q 043601 107 TTANPVYTVSELSKQVKDSSPKLVVTVPELWERVKDFNI-------PAVLLGSNHIVSPRGLRSSSNIVYFDELIELS-- 177 (488)
Q Consensus 107 v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 177 (488)
+|+++.++.+++.++++.+++++++++.+....+..... ..+..... . ....+.+.....
T Consensus 95 vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~---------~~~~~~~~~~~~~~ 163 (539)
T PRK06334 95 VMINWSQGLREVTACANLVGVTHVLTSKQLMQHLAQTHGEDAEYPFSLIYMEEV--R---------KELSFWEKCRIGIY 163 (539)
T ss_pred EecCcccchHHHHHHHHHcCCCEEEehHHHHHHHhhhhhccccccccEEEEehh--h---------hhccHHHhhhhhhh
Confidence 999999999999999999999999999876665543211 11111100 0 000001110000
Q ss_pred --CCC----CCCCCCCCCCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHhhhhhhcCCCCcEEEEecchhhHHhHHH
Q 043601 178 --GNA----SNFPDVSVKQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTAMDQELAGALDYVTLCVLPMFHVFGLSF 251 (488)
Q Consensus 178 --~~~----~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (488)
... .........++++++|+|||||||.||+|++||+++..+. ......+....++++++.+|++|.+++..
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~--~~~~~~~~~~~~d~~l~~~p~~h~~g~~~ 241 (539)
T PRK06334 164 MSIPFEWLMRWFGVSDKDPEDVAVILFTSGTEKLPKGVPLTHANLLANQ--RACLKFFSPKEDDVMMSFLPPFHAYGFNS 241 (539)
T ss_pred hcCCchhhhhcccCCCCCcCCEEEEEECCCCCCCCCEEEEcHHHHHHHH--HHHHHhcCCCCCceEEEecchHhhhhhHH
Confidence 000 0011124567899999999999999999999999998763 33444556778899999999999999876
Q ss_pred HHHHHhhCCceEEEcC-CCCHHHHHHHHHhcCccEEEecHHHHHHHHhcCCccCCCCCCCccEEEEccCCCcHHHHHHHH
Q 043601 252 VVYAQLQKGNCVVSMR-KFDLETALRAIEKYRVTHWWVVPPIILALAKNVSLVKKFDLSSLKGIGSGAAPLRKELVEECS 330 (488)
Q Consensus 252 ~~~~~l~~G~~~~~~~-~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~ 330 (488)
.++.++..|+++++.. .+++..+++.|+++++|+++++|+++..+++. ......++++||.+++||+++++++.+++.
T Consensus 242 ~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~-~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~ 320 (539)
T PRK06334 242 CTLFPLLSGVPVVFAYNPLYPKKIVEMIDEAKVTFLGSTPVFFDYILKT-AKKQESCLPSLRFVVIGGDAFKDSLYQEAL 320 (539)
T ss_pred HHHHHHHcCCeEEEecCCCCHHHHHHHHHHhCCcEEEecHHHHHHHHHh-hhhcccccccccEEEECCccCCHHHHHHHH
Confidence 7888999999998875 57999999999999999999999999999876 444456789999999999999999999999
Q ss_pred hhCCCCeEEeccCcccccccccccCCCCCCCCCCceeecCCCceEEEEeCCCCCCCCCCCcceEEEecC-----------
Q 043601 331 KNLPTVTVFQGYGMTETCGVVTVENPLLGVQNSGSTGTLVAGVEAQIVCVDTLKPLPPNQVGELWVRGP----------- 399 (488)
Q Consensus 331 ~~~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~----------- 399 (488)
+.|+++.+++.||+||++.+++...... .....++|+|+++++++|+|++++++++.|+.|||+|+|+
T Consensus 321 ~~~~~~~i~~~YG~TE~~~~~~~~~~~~-~~~~~~vG~p~~g~~v~i~d~~~~~~~~~g~~Gel~v~g~~~~~GY~~~~~ 399 (539)
T PRK06334 321 KTFPHIQLRQGYGTTECSPVITINTVNS-PKHESCVGMPIRGMDVLIVSEETKVPVSSGETGLVLTRGTSLFSGYLGEDF 399 (539)
T ss_pred HHCCCCeEEecccccccCceEEeccCCC-CCCCCcCceecCCCEEEEEcCCCCccCCCCceEEEEEecCcccccccCCcc
Confidence 9997799999999999987666543321 2345679999999999999977789999999999999875
Q ss_pred -----------CccccceEEEccCCcEEEEcccCcceeeCcEEe---eHhHHHhcCCCeee------eEEEeecCCCCCc
Q 043601 400 -----------ILMPGDLGYFDEHGQLFIVDRIKELIKCNGFQV---ELEGVLVSHPEILD------AVVIPFPDPEAGE 459 (488)
Q Consensus 400 -----------~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v---~ie~~l~~~~~v~~------~~v~~~~~~~~~~ 459 (488)
||+|||+|+++++|++++.||.+|+||++|++| +||.+|.+||+|.+ ++|++.++.. .
T Consensus 400 ~~~~~~~~~~~w~~TGD~g~~d~~G~l~~~GR~~d~ik~~G~~v~p~eIE~~l~~~~~v~~~~~~~~~~v~~~~~~~--~ 477 (539)
T PRK06334 400 GQGFVELGGETWYVTGDLGYVDRHGELFLKGRLSRFVKIGAEMVSLEALESILMEGFGQNAADHAGPLVVCGLPGEK--V 477 (539)
T ss_pred cccceeeCCceeEECCCEEEECCCCeEEEEeccCCeEEECCEEECHHHHHHHHHHccCCccccccCceEEEcCCCCc--e
Confidence 688999999999999999999999999999999 99999999999998 6777766432 3
Q ss_pred eEEEEEEeCCCCCCCHHHHHHHHHhh
Q 043601 460 VPIAYVVRSPNSSLTKEDVQKFVAND 485 (488)
Q Consensus 460 ~~~~~v~~~~~~~~~~~~i~~~~~~~ 485 (488)
.++++++.. .+.++++++++++
T Consensus 478 ~~~~~~~~~----~~~~~~~~~l~~~ 499 (539)
T PRK06334 478 RLCLFTTFP----TSISEVNDILKNS 499 (539)
T ss_pred EEEEEEecc----CChHHHHHHHHhc
Confidence 455555432 3578899999875
No 23
>PRK06839 acyl-CoA synthetase; Validated
Probab=100.00 E-value=5e-60 Score=478.16 Aligned_cols=433 Identities=28% Similarity=0.372 Sum_probs=371.3
Q ss_pred CHHHHHhhccccCCCceEEEeCCCCcceeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCCcchHHHHHHHHHcCCeE
Q 043601 28 SMVHFLFRNSASYGSKSALIDADSGESLTFSQFKSIVIKVSHGFRH-LGVTKHDVVLIFAPNSIQFPICLLGVIAIGGIA 106 (488)
Q Consensus 28 ~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~-~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~ 106 (488)
.+.++|.++|+.+|+++|+++. ++.+||+||+++++++|++|++ .|+++|++|+++++|++++++++|||+++|+++
T Consensus 3 ~~~~~~~~~a~~~p~~~a~~~~--~~~~ty~~l~~~~~~la~~L~~~~g~~~~~~V~i~~~~~~~~~~~~la~~~~G~~~ 80 (496)
T PRK06839 3 GIAYWIEKRAYLHPDRIAIITE--EEEMTYKQLHEYVSKVAAYLIYELNVKKGERIAILSQNSLEYIVLLFAIAKVECIA 80 (496)
T ss_pred cHHHHHHHHHHHCCCCeEEEEC--CceEEHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHhcCcEE
Confidence 5789999999999999999987 7999999999999999999985 799999999999999999999999999999999
Q ss_pred eecCCCCCHHHHHHHHhhcCCeEEEEccccHHHHhccCC----CeEEEcccCcccCCCCcCCCCccchHHHHhhcCCCCC
Q 043601 107 TTANPVYTVSELSKQVKDSSPKLVVTVPELWERVKDFNI----PAVLLGSNHIVSPRGLRSSSNIVYFDELIELSGNASN 182 (488)
Q Consensus 107 v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (488)
+|+++.++.+++..+++.++++.++++++....+..... ..++. +.+++++.....
T Consensus 81 ~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~---- 140 (496)
T PRK06839 81 VPLNIRLTENELIFQLKDSGTTVLFVEKTFQNMALSMQKVSYVQRVIS----------------ITSLKEIEDRKI---- 140 (496)
T ss_pred EecCcccCHHHHHHHHHhcCceEEEEcHHHHHHHHHhhhccCcceEEE----------------ecchHhhhccCC----
Confidence 999999999999999999999999999877655443321 11110 011222221111
Q ss_pred CCCCCCCCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHhhhhhhcCCCCcEEEEecchhhHHhHHHHHHHHhhCCce
Q 043601 183 FPDVSVKQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTAMDQELAGALDYVTLCVLPMFHVFGLSFVVYAQLQKGNC 262 (488)
Q Consensus 183 ~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~ 262 (488)
.......++++++|+|||||||.||+|.++|.++...+.. ....+....++++++.+|++|.+++....+.++..|++
T Consensus 141 ~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~--~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~g~~ 218 (496)
T PRK06839 141 DNFVEKNESASFIICYTSGTTGKPKGAVLTQENMFWNALN--NTFAIDLTMHDRSIVLLPLFHIGGIGLFAFPTLFAGGV 218 (496)
T ss_pred CCCCCCCCCCcEEEEeCCCCCCCCcEEEEEhHHHHHHHHH--HHHHcCCCCCCeEEEeeCCcchhhHHHHHHHHHhcCcE
Confidence 1122345689999999999999999999999998765322 33445567889999999999999987777889999999
Q ss_pred EEEcCCCCHHHHHHHHHhcCccEEEecHHHHHHHHhcCCccCCCCCCCccEEEEccCCCcHHHHHHHHhhCCCCeEEecc
Q 043601 263 VVSMRKFDLETALRAIEKYRVTHWWVVPPIILALAKNVSLVKKFDLSSLKGIGSGAAPLRKELVEECSKNLPTVTVFQGY 342 (488)
Q Consensus 263 ~~~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~i~~~Y 342 (488)
+++.+.+++..+++.++++++|.+.++|++++.+++. ......+++++|.+++||+++++++.+.+.+. ++++.+.|
T Consensus 219 ~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~-~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~--g~~~~~~Y 295 (496)
T PRK06839 219 IIVPRKFEPTKALSMIEKHKVTVVMGVPTIHQALINC-SKFETTNLQSVRWFYNGGAPCPEELMREFIDR--GFLFGQGF 295 (496)
T ss_pred EEEccCCCHHHHHHHHHhhCCeEEEehHHHHHHHHhC-cccccCCCcccceEEECCCCCCHHHHHHHHHh--CCeeEeec
Confidence 9999889999999999999999999999999999987 44445678899999999999999999999987 48999999
Q ss_pred CcccccccccccCCCCCCCCCCceeecCCCceEEEEeCCCCCCCCCCCcceEEEecC--------------------Ccc
Q 043601 343 GMTETCGVVTVENPLLGVQNSGSTGTLVAGVEAQIVCVDTLKPLPPNQVGELWVRGP--------------------ILM 402 (488)
Q Consensus 343 G~tE~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~--------------------~~~ 402 (488)
|+||++..++.........+.+++|+|++++.++|+|+ +++.++.|+.|||+++|+ ||+
T Consensus 296 G~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~-~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~ 374 (496)
T PRK06839 296 GMTETSPTVFMLSEEDARRKVGSIGKPVLFCDYELIDE-NKNKVEVGEVGELLIRGPNVMKEYWNRPDATEETIQDGWLC 374 (496)
T ss_pred cCCCCCcceEecccccccccCCCCcccCCCceEEEECC-CcCCCCCCCceEEEEECCCcchhhcCChHHHHHHHcCCCee
Confidence 99999876554443333456788999999999999994 667799999999999986 478
Q ss_pred ccceEEEccCCcEEEEcccCcceeeCcEEe---eHhHHHhcCCCeeeeEEEeecCCCCCceEEEEEEeCCCCCCCHHHHH
Q 043601 403 PGDLGYFDEHGQLFIVDRIKELIKCNGFQV---ELEGVLVSHPEILDAVVIPFPDPEAGEVPIAYVVRSPNSSLTKEDVQ 479 (488)
Q Consensus 403 tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v---~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~ 479 (488)
|||+++++++|.+++.||.+|+|+.+|.+| +||.++.++|+|.+++|++.+++..++.++++|+++++...+.++++
T Consensus 375 TGDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~l~ 454 (496)
T PRK06839 375 TGDLARVDEDGFVYIVGRKKEMIISGGENIYPLEVEQVINKLSDVYEVAVVGRQHVKWGEIPIAFIVKKSSSVLIEKDVI 454 (496)
T ss_pred ecceEEEcCCCcEEEeccccceEEECCEEECHHHHHHHHHhCCCeeEEEEEeccccccCceEEEEEEECCCCCCCHHHHH
Confidence 999999999999999999999999999999 99999999999999999999999889999999999988778889999
Q ss_pred HHHHhhcCC
Q 043601 480 KFVANDSQL 488 (488)
Q Consensus 480 ~~~~~~l~~ 488 (488)
++++++|+.
T Consensus 455 ~~~~~~l~~ 463 (496)
T PRK06839 455 EHCRLFLAK 463 (496)
T ss_pred HHHHhhCcC
Confidence 999988763
No 24
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=100.00 E-value=7.1e-60 Score=489.04 Aligned_cols=455 Identities=26% Similarity=0.361 Sum_probs=362.2
Q ss_pred CCH-HHHHhhccccCCCceEEEeCC----CCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHH
Q 043601 27 LSM-VHFLFRNSASYGSKSALIDAD----SGESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQFPICLLGVIA 101 (488)
Q Consensus 27 ~~l-~~~l~~~a~~~p~~~a~~~~~----~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~ 101 (488)
+|+ .++|.++++.+|+++|+++.. ..+.+||+||.++++++|+.|++.|+++||+|+++++|++++++++|||++
T Consensus 52 ~n~~~~~l~~~~~~~p~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~ 131 (629)
T PRK10524 52 TNLCHNAVDRHLAKRPEQLALIAVSTETDEERTYTFRQLHDEVNRMAAMLRSLGVQRGDRVLIYMPMIAEAAFAMLACAR 131 (629)
T ss_pred eeHHHHHHHHhhccCCCCeEEEEEcCCCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHH
Confidence 555 456777888899999998631 236899999999999999999999999999999999999999999999999
Q ss_pred cCCeEeecCCCCCHHHHHHHHhhcCCeEEEEccccH---------HHHh---c-c--CC-CeEEEcccCcccCCCCcCCC
Q 043601 102 IGGIATTANPVYTVSELSKQVKDSSPKLVVTVPELW---------ERVK---D-F--NI-PAVLLGSNHIVSPRGLRSSS 165 (488)
Q Consensus 102 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~---------~~~~---~-~--~~-~~~~~~~~~~~~~~~~~~~~ 165 (488)
+|++++|+++.++.+++..++++++++++|+++... +.+. . . .. ..+.+..... ... ....
T Consensus 132 ~Gav~v~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~--~~~-~~~~ 208 (629)
T PRK10524 132 IGAIHSVVFGGFASHSLAARIDDAKPVLIVSADAGSRGGKVVPYKPLLDEAIALAQHKPRHVLLVDRGLA--PMA-RVAG 208 (629)
T ss_pred hCcEEEeeCCCCCHHHHHHHHHhcCCcEEEEccCcccCCcccccHHHHHHHHHhcCCCCCEEEEEeCCCC--CcC-cccC
Confidence 999999999999999999999999999999976421 1111 1 1 11 2222221100 000 0011
Q ss_pred CccchHHHHhhcCCCCCCCCCCCCCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHhhhhhhcCCCCcEEEEecchhh
Q 043601 166 NIVYFDELIELSGNASNFPDVSVKQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTAMDQELAGALDYVTLCVLPMFH 245 (488)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (488)
....+.++...... ...+.....++++++|+|||||||.||+|+++|.++.... .......+...+++++++..|++|
T Consensus 209 ~~~~~~~~~~~~~~-~~~~~~~~~~~d~a~il~TSGTTG~PKgV~~~~~~~~~~~-~~~~~~~~~~~~~d~~~~~~~~~~ 286 (629)
T PRK10524 209 RDVDYATLRAQHLG-ARVPVEWLESNEPSYILYTSGTTGKPKGVQRDTGGYAVAL-ATSMDTIFGGKAGETFFCASDIGW 286 (629)
T ss_pred CcccHHHHHhcCCC-CCCCceeeCCCCceEEEeecCCCCCCceEEECCcHHHHHH-HHHHHHhcCCCCCCEEEEcCCCCe
Confidence 12234444332111 1122223567899999999999999999999999875432 111233445678899999999999
Q ss_pred HHhHHHHHHHHhhCCceEEEcCC----CCHHHHHHHHHhcCccEEEecHHHHHHHHhcCCc-cCCCCCCCccEEEEccCC
Q 043601 246 VFGLSFVVYAQLQKGNCVVSMRK----FDLETALRAIEKYRVTHWWVVPPIILALAKNVSL-VKKFDLSSLKGIGSGAAP 320 (488)
Q Consensus 246 ~~~~~~~~~~~l~~G~~~~~~~~----~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~-~~~~~l~~lr~v~~~G~~ 320 (488)
..+..+.++.++..|+++++.++ .++..+++.++++++|+++++|+++..+.+.... ....++++||.+++|||+
T Consensus 287 ~~~~~~~~~~~l~~G~~~v~~~g~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~i~~~Ge~ 366 (629)
T PRK10524 287 VVGHSYIVYAPLLAGMATIMYEGLPTRPDAGIWWRIVEKYKVNRMFSAPTAIRVLKKQDPALLRKHDLSSLRALFLAGEP 366 (629)
T ss_pred eccchHHHHHHHhCCCEEEEECCCCCCCChHHHHHHHHHcCceEEEeCHHHHHHHHhcCcccccccChhheeEEEEeCCC
Confidence 98876788899999999998753 4789999999999999999999999988775111 234578899999999999
Q ss_pred CcHHHHHHHHhhCCCCeEEeccCcccccccccccCC--CCCCCCCCceeecCCCceEEEEeCCCCCCCCCCCcceEEEec
Q 043601 321 LRKELVEECSKNLPTVTVFQGYGMTETCGVVTVENP--LLGVQNSGSTGTLVAGVEAQIVCVDTLKPLPPNQVGELWVRG 398 (488)
Q Consensus 321 l~~~~~~~~~~~~~~~~i~~~YG~tE~~~~~~~~~~--~~~~~~~~~~g~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g 398 (488)
+++++.+++.+.++ +.+++.||+||++..+..... .....+.+++|+|++++.++|+|+++|++++.|+.|||+++|
T Consensus 367 l~~~~~~~~~~~~~-~~v~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~G~p~~g~~~~i~d~~~g~~~~~g~~Gel~i~g 445 (629)
T PRK10524 367 LDEPTASWISEALG-VPVIDNYWQTETGWPILAIARGVEDRPTRLGSPGVPMYGYNVKLLNEVTGEPCGPNEKGVLVIEG 445 (629)
T ss_pred CCHHHHHHHHHhcC-CCeEeccccccccchhhcCCCCcccCcCCCCCcccCcCCceEEEEeCCCCCCCCCCCcEEEEEcC
Confidence 99999999999987 899999999999843332221 111345678999999999999996589999999999999998
Q ss_pred C---------------------------CccccceEEEccCCcEEEEcccCcceeeCcEEe---eHhHHHhcCCCeeeeE
Q 043601 399 P---------------------------ILMPGDLGYFDEHGQLFIVDRIKELIKCNGFQV---ELEGVLVSHPEILDAV 448 (488)
Q Consensus 399 ~---------------------------~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v---~ie~~l~~~~~v~~~~ 448 (488)
+ ||+|||+|++++||++++.||+||+||++|++| +||++|.+||+|.+++
T Consensus 446 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGDl~~~d~dG~l~i~GR~dd~i~~~G~ri~p~eIE~~l~~~p~V~e~~ 525 (629)
T PRK10524 446 PLPPGCMQTVWGDDDRFVKTYWSLFGRQVYSTFDWGIRDADGYYFILGRTDDVINVAGHRLGTREIEESISSHPAVAEVA 525 (629)
T ss_pred CCChhhcCCccCChHHHHHhhhccCCCcEEEcCCcEEEcCCCcEEEEEEecCeEEeCCEEeCHHHHHHHHHhCCCcceEE
Confidence 5 578999999999999999999999999999999 9999999999999999
Q ss_pred EEeecCCCCCceEEEEEEeCCCCCCC--------HHHHHHHHHhhcC
Q 043601 449 VIPFPDPEAGEVPIAYVVRSPNSSLT--------KEDVQKFVANDSQ 487 (488)
Q Consensus 449 v~~~~~~~~~~~~~~~v~~~~~~~~~--------~~~i~~~~~~~l~ 487 (488)
|++.+++..++.++++|+++++...+ .++|+++++++|+
T Consensus 526 vvg~~d~~~g~~~~~~vv~~~~~~~~~~~~~~~~~~~i~~~~~~~l~ 572 (629)
T PRK10524 526 VVGVKDALKGQVAVAFVVPKDSDSLADREARLALEKEIMALVDSQLG 572 (629)
T ss_pred EEccccCCCCeEEEEEEEECCCCccccccchHHHHHHHHHHHHhhcC
Confidence 99999988899999999998764332 4678899988876
No 25
>PRK08316 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.4e-59 Score=478.08 Aligned_cols=451 Identities=29% Similarity=0.410 Sum_probs=383.8
Q ss_pred CCCCHHHHHhhccccCCCceEEEeCCCCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHHcCC
Q 043601 25 PNLSMVHFLFRNSASYGSKSALIDADSGESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQFPICLLGVIAIGG 104 (488)
Q Consensus 25 ~~~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~ 104 (488)
...++.++|..+++.+|+++|+.+. +..+||+||++.+.++|..|.+.|+++|++|+++++|+++++++++||+++|+
T Consensus 9 ~~~~l~~~l~~~a~~~~~~~a~~~~--~~~~Ty~~l~~~~~~~a~~L~~~gi~~~~~V~l~~~~~~~~~~~~~a~~~~G~ 86 (523)
T PRK08316 9 RRQTIGDILRRSARRYPDKTALVFG--DRSWTYAELDAAVNRVAAALLDLGLKKGDRVAALGHNSDAYALLWLACARAGA 86 (523)
T ss_pred cCCCHHHHHHHHHHHCCCCeEEEEC--CceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhcCc
Confidence 3468999999999999999999987 68999999999999999999999999999999999999999999999999999
Q ss_pred eEeecCCCCCHHHHHHHHhhcCCeEEEEccccHHHHhccC----CCeEEEcccCcccCCCCcCCCCccchHHHHhhcCCC
Q 043601 105 IATTANPVYTVSELSKQVKDSSPKLVVTVPELWERVKDFN----IPAVLLGSNHIVSPRGLRSSSNIVYFDELIELSGNA 180 (488)
Q Consensus 105 ~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (488)
+++|+++.++.+++..+++.+++++++++.+....+.... ......... ............++++.....
T Consensus 87 ~~v~l~~~~~~~~i~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~-- 160 (523)
T PRK08316 87 VHVPVNFMLTGEELAYILDHSGARAFLVDPALAPTAEAALALLPVDTLILSLV----LGGREAPGGWLDFADWAEAGS-- 160 (523)
T ss_pred EEEecccccCHHHHHHHHHhCCCCEEEEccchHHHHHHHhhhcCccceeeeec----ccccccccchhhHHHHHhcCC--
Confidence 9999999999999999999999999999988766654321 111111000 000111123344444443322
Q ss_pred CCCCCCCCCCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHhhhhhhcCCCCcEEEEecchhhHHhHHHHHHHHhhCC
Q 043601 181 SNFPDVSVKQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTAMDQELAGALDYVTLCVLPMFHVFGLSFVVYAQLQKG 260 (488)
Q Consensus 181 ~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G 260 (488)
..........+++++++|||||||.||+|.+||.++... ...........+++++++.+|++|..++...++.++..|
T Consensus 161 ~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~--~~~~~~~~~~~~~~~~~~~~p~~h~~g~~~~~~~~~~~G 238 (523)
T PRK08316 161 VAEPDVELADDDLAQILYTSGTESLPKGAMLTHRALIAE--YVSCIVAGDMSADDIPLHALPLYHCAQLDVFLGPYLYVG 238 (523)
T ss_pred CccCccCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHH--HHHHHHHhCCCCCceEEEccCCchhhhHHHHHHHHHhcC
Confidence 222334567889999999999999999999999999876 333444556788999999999999999866677889999
Q ss_pred ceEEEcCCCCHHHHHHHHHhcCccEEEecHHHHHHHHhcCCccCCCCCCCccEEEEccCCCcHHHHHHHHhhCCCCeEEe
Q 043601 261 NCVVSMRKFDLETALRAIEKYRVTHWWVVPPIILALAKNVSLVKKFDLSSLKGIGSGAAPLRKELVEECSKNLPTVTVFQ 340 (488)
Q Consensus 261 ~~~~~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~i~~ 340 (488)
+++++.+..++..+++.++++++|++.++|+++..+.+. ......+++++|.+++||+.++.++.+.+.+.+++..+++
T Consensus 239 ~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~-~~~~~~~~~~l~~~~~gg~~~~~~~~~~~~~~~~~~~~~~ 317 (523)
T PRK08316 239 ATNVILDAPDPELILRTIEAERITSFFAPPTVWISLLRH-PDFDTRDLSSLRKGYYGASIMPVEVLKELRERLPGLRFYN 317 (523)
T ss_pred ceEEEecCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHcC-cccccCCcccceEEEEcCCcCCHHHHHHHHHHcCCCceee
Confidence 999999888999999999999999999999999999887 4445567889999999999999999999999997799999
Q ss_pred ccCcccccccccccCCCCCCCCCCceeecCCCceEEEEeCCCCCCCCCCCcceEEEecC--------------------C
Q 043601 341 GYGMTETCGVVTVENPLLGVQNSGSTGTLVAGVEAQIVCVDTLKPLPPNQVGELWVRGP--------------------I 400 (488)
Q Consensus 341 ~YG~tE~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~--------------------~ 400 (488)
.||+||++.++............+++|+|++++.++|+| +++++++.|+.|||+++|+ |
T Consensus 318 ~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~-~~~~~~~~g~~Gei~v~~~~~~~~y~~~~~~~~~~~~~~~ 396 (523)
T PRK08316 318 CYGQTEIAPLATVLGPEEHLRRPGSAGRPVLNVETRVVD-DDGNDVAPGEVGEIVHRSPQLMLGYWDDPEKTAEAFRGGW 396 (523)
T ss_pred eecccccCccccccCccccccccCCcccCCCCcEEEEEc-CCCCCCCCCCcceEEEECCchhhhhcCCHHHHHHHhhCCC
Confidence 999999998776654443345567899999999999999 5789999999999999884 6
Q ss_pred ccccceEEEccCCcEEEEcccCcceeeCcEEe---eHhHHHhcCCCeeeeEEEeecCCCCCceEEEEEEeCCCCCCCHHH
Q 043601 401 LMPGDLGYFDEHGQLFIVDRIKELIKCNGFQV---ELEGVLVSHPEILDAVVIPFPDPEAGEVPIAYVVRSPNSSLTKED 477 (488)
Q Consensus 401 ~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v---~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 477 (488)
|+|||+|++++||.+++.||.+|+|+++|.+| +||..+.++++|.+++|++.+++..++.++++++++++...+.++
T Consensus 397 ~~TGDl~~~~~~g~l~i~gR~~~~i~~~G~~i~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 476 (523)
T PRK08316 397 FHSGDLGVMDEEGYITVVDRKKDMIKTGGENVASREVEEALYTHPAVAEVAVIGLPDPKWIEAVTAVVVPKAGATVTEDE 476 (523)
T ss_pred eeccceEEEcCCceEEEecccccEEEeCCeEECHHHHHHHHHhCCChheEeEecccCcccCCeEEEEEEECCCCCCCHHH
Confidence 89999999999999999999999999999999 999999999999999999999998889999999998876678899
Q ss_pred HHHHHHhhcC
Q 043601 478 VQKFVANDSQ 487 (488)
Q Consensus 478 i~~~~~~~l~ 487 (488)
++++++++|+
T Consensus 477 l~~~~~~~l~ 486 (523)
T PRK08316 477 LIAHCRARLA 486 (523)
T ss_pred HHHHHHHhcc
Confidence 9999998875
No 26
>PLN02736 long-chain acyl-CoA synthetase
Probab=100.00 E-value=8e-60 Score=489.21 Aligned_cols=433 Identities=22% Similarity=0.266 Sum_probs=345.6
Q ss_pred CCCHHHHHhhccccCCCceEEEe---CCC----CcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHH
Q 043601 26 NLSMVHFLFRNSASYGSKSALID---ADS----GESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQFPICLLG 98 (488)
Q Consensus 26 ~~~l~~~l~~~a~~~p~~~a~~~---~~~----~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA 98 (488)
..|+.++|+++++++|+++|+.. .++ .+.+||+||.++++++|++|+++|+++||+|+|+++|+++|++++||
T Consensus 43 ~~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~lTy~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~~~~~lA 122 (651)
T PLN02736 43 IGTLHDNFVYAVETFRDYKYLGTRIRVDGTVGEYKWMTYGEAGTARTAIGSGLVQHGIPKGACVGLYFINRPEWLIVDHA 122 (651)
T ss_pred CCCHHHHHHHHHHhCCCCCeEEEEecCCCCCCCcEEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHH
Confidence 36899999999999999999942 111 25699999999999999999999999999999999999999999999
Q ss_pred HHHcCCeEeecCCCCCHHHHHHHHhhcCCeEEEEccccHHHHhcc-----CCCeEEEcccCcccCCC--CcCCCCccchH
Q 043601 99 VIAIGGIATTANPVYTVSELSKQVKDSSPKLVVTVPELWERVKDF-----NIPAVLLGSNHIVSPRG--LRSSSNIVYFD 171 (488)
Q Consensus 99 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 171 (488)
|+++|++++|+++.++.+++.++++.++++++|++.+....+... ..+.+++.......... ........+++
T Consensus 123 ~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~ 202 (651)
T PLN02736 123 CSAYSYVSVPLYDTLGPDAVKFIVNHAEVAAIFCVPQTLNTLLSCLSEIPSVRLIVVVGGADEPLPSLPSGTGVEIVTYS 202 (651)
T ss_pred HHHcCCeEEEeecCCCHHHHHHHHhccCCCEEEECHHHHHHHHHHhhcCCCceEEEEECCCchhhhhhhccCCcEEEEHH
Confidence 999999999999999999999999999999999998766554332 11222222110000000 00112234566
Q ss_pred HHHhhcCCCCCCCCCCCCCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHhhhhhhcCCCCcEEEEecchhhHHhHHH
Q 043601 172 ELIELSGNASNFPDVSVKQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTAMDQELAGALDYVTLCVLPMFHVFGLSF 251 (488)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (488)
++...... .........++++++|+|||||||.||||++||+++.... ......+...+++++++.+|++|.+++ .
T Consensus 203 ~~~~~~~~-~~~~~~~~~~dd~a~IlyTSGTTG~PKGV~lsh~~l~~~~--~~~~~~~~~~~~d~~l~~lPl~h~~~~-~ 278 (651)
T PLN02736 203 KLLAQGRS-SPQPFRPPKPEDVATICYTSGTTGTPKGVVLTHGNLIANV--AGSSLSTKFYPSDVHISYLPLAHIYER-V 278 (651)
T ss_pred HHHHhccc-CCCCCCCCCccceEEEEEcCCCCCCCcEEEEecHHHHHHH--HHHHhccCCCCCCEEEEeCCHHHHHHH-H
Confidence 66654321 1112234568999999999999999999999999998773 334445567789999999999999998 5
Q ss_pred HHHHHhhCCceEEEcCCCCHHHHHHHHHhcCccEEEecHHHHHHHHhcCCc----------------------------c
Q 043601 252 VVYAQLQKGNCVVSMRKFDLETALRAIEKYRVTHWWVVPPIILALAKNVSL----------------------------V 303 (488)
Q Consensus 252 ~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~----------------------------~ 303 (488)
.++.++..|+++++.+. ++..+++.++++++|+++++|.+++.+.+.... .
T Consensus 279 ~~~~~l~~G~~i~~~~~-~~~~~~~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (651)
T PLN02736 279 NQIVMLHYGVAVGFYQG-DNLKLMDDLAALRPTIFCSVPRLYNRIYDGITNAVKESGGLKERLFNAAYNAKKQALENGKN 357 (651)
T ss_pred HHHHHHHcCCEEEEeCC-CHHHHHHHHHHhCCcEEecchHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHcCCC
Confidence 67788999999988765 788999999999999999999999887653100 0
Q ss_pred CC------------CCC-CCccEEEEccCCCcHHHHHHHHhhCCCCeEEeccCcccccccccccCCCCCCCCCCceeecC
Q 043601 304 KK------------FDL-SSLKGIGSGAAPLRKELVEECSKNLPTVTVFQGYGMTETCGVVTVENPLLGVQNSGSTGTLV 370 (488)
Q Consensus 304 ~~------------~~l-~~lr~v~~~G~~l~~~~~~~~~~~~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~g~~~ 370 (488)
.. ..+ +++|.+++||+++++++.+.+.+.++ +.+++.||+||+++.++..... ....+++|+|+
T Consensus 358 ~~~~~~~~~~~~~~~~lg~~lr~~~~gGa~l~~~~~~~~~~~~g-~~~~~~YG~TE~~~~~~~~~~~--~~~~~~vG~p~ 434 (651)
T PLN02736 358 PSPMWDRLVFNKIKAKLGGRVRFMSSGASPLSPDVMEFLRICFG-GRVLEGYGMTETSCVISGMDEG--DNLSGHVGSPN 434 (651)
T ss_pred CCchHHHHHHHHHHHHhcCcEEEEEeCCCCCCHHHHHHHHHHhC-CCeEEEechHHhchheeccCCC--CCCCCccCCcc
Confidence 00 011 48999999999999999999998887 8999999999998766544432 35678899999
Q ss_pred CCceEEEEeCCCCCC---CCCCCcceEEEecC---------------------CccccceEEEccCCcEEEEcccCccee
Q 043601 371 AGVEAQIVCVDTLKP---LPPNQVGELWVRGP---------------------ILMPGDLGYFDEHGQLFIVDRIKELIK 426 (488)
Q Consensus 371 ~~~~~~i~d~~~~~~---~~~g~~Gel~v~g~---------------------~~~tGD~~~~~~~g~l~~~GR~~d~i~ 426 (488)
|+++++|+|.+++.. ...++.|||+++|+ |++|||+|++++||+++|.||+||+||
T Consensus 435 pg~~v~i~d~~~~~~~~~~~~~~~GEl~vrgp~v~~GY~~~~~~t~~~~~~dgw~~TGDlg~~d~dG~l~i~GR~kd~ik 514 (651)
T PLN02736 435 PACEVKLVDVPEMNYTSEDQPYPRGEICVRGPIIFKGYYKDEVQTREVIDEDGWLHTGDIGLWLPGGRLKIIDRKKNIFK 514 (651)
T ss_pred CceEEEEEEccccCcccCCCCCCCceEEecCCccccccccCHHHHHhhhccCCCeeccceEEEcCCCcEEEEEechhheE
Confidence 999999998544332 23345799999985 788999999999999999999999999
Q ss_pred e-CcEEe---eHhHHHhcCCCeeeeEEEeecCCCCCceEEEEEEeCC
Q 043601 427 C-NGFQV---ELEGVLVSHPEILDAVVIPFPDPEAGEVPIAYVVRSP 469 (488)
Q Consensus 427 ~-~G~~v---~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~ 469 (488)
+ +|++| +||+++.+||.|.+++|++. ..++.++|+|++++
T Consensus 515 ~~~G~~V~p~eIE~~l~~~p~V~~a~V~g~---~~~~~~~A~vv~~~ 558 (651)
T PLN02736 515 LAQGEYIAPEKIENVYAKCKFVAQCFVYGD---SLNSSLVAVVVVDP 558 (651)
T ss_pred cCCCcEechHHHHHHHhcCCCeeEEEEEec---CCCceeEEEEEeCH
Confidence 7 79999 99999999999999999983 34678999999875
No 27
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=100.00 E-value=2.8e-60 Score=491.63 Aligned_cols=431 Identities=21% Similarity=0.283 Sum_probs=335.8
Q ss_pred CCHHHHHhhccccCCCceEEEeC-----CCC--cceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHH
Q 043601 27 LSMVHFLFRNSASYGSKSALIDA-----DSG--ESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQFPICLLGV 99 (488)
Q Consensus 27 ~~l~~~l~~~a~~~p~~~a~~~~-----~~~--~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~ 99 (488)
.|+.++|.++++++|+++|+... ..+ +++||+||+++++++|++|.++|+++||+|+|+++|+++|++++|||
T Consensus 43 ~t~~~~l~~~~~~~p~~~al~~~~~~~~~~g~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~~~~~lA~ 122 (660)
T PLN02861 43 DSPWQFFSDAVKKYPNNQMLGRRQVTDSKVGPYVWLTYKEVYDAAIRIGSAIRSRGVNPGDRCGIYGSNCPEWIIAMEAC 122 (660)
T ss_pred CCHHHHHHHHHHhCCCCCeEEEEecCCCCCCCceEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHH
Confidence 58999999999999999999642 112 57999999999999999999999999999999999999999999999
Q ss_pred HHcCCeEeecCCCCCHHHHHHHHhhcCCeEEEEccccHHHHhcc------CCCeEEEcccCcccC--CCCcCCCCccchH
Q 043601 100 IAIGGIATTANPVYTVSELSKQVKDSSPKLVVTVPELWERVKDF------NIPAVLLGSNHIVSP--RGLRSSSNIVYFD 171 (488)
Q Consensus 100 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~------~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 171 (488)
+++|+++||+++.++.+++.+++++++++++|++++....+... ..+.++...+..... ..........+++
T Consensus 123 ~~~G~v~vpl~~~~~~~~l~~il~~s~~~~v~~~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~ 202 (660)
T PLN02861 123 NSQGITYVPLYDTLGANAVEFIINHAEVSIAFVQESKISSILSCLPKCSSNLKTIVSFGDVSSEQKEEAEELGVSCFSWE 202 (660)
T ss_pred HHcCCeEEEecCCCCHHHHHHHHHcCCCCEEEECHHHHHHHHHhhhhCCCCCEEEEEECCCChhhhhhhhcCCcEEEEHH
Confidence 99999999999999999999999999999999987765544321 122232221110000 0000011234566
Q ss_pred HHHhhcCCCCCCCCCCCCCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHhhhhhhc-----CCCCcEEEEecchhhH
Q 043601 172 ELIELSGNASNFPDVSVKQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTAMDQELA-----GALDYVTLCVLPMFHV 246 (488)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 246 (488)
++...... ........++++++|+|||||||.||||++||.++...+.. ....+. ..+++++++.+|++|.
T Consensus 203 ~~~~~~~~--~~~~~~~~~dd~a~i~yTSGTTG~PKGV~lth~~l~~~~~~--~~~~~~~~~~~~~~~d~~l~~lPl~H~ 278 (660)
T PLN02861 203 EFSLMGSL--DCELPPKQKTDICTIMYTSGTTGEPKGVILTNRAIIAEVLS--TDHLLKVTDRVATEEDSYFSYLPLAHV 278 (660)
T ss_pred HHHHhCcc--cCCCCccCCCceEEEEecCCCCCCCCEEEEecHHHHHHHHH--HHhccccccccCCCCCEEEEECcHHHH
Confidence 66543321 11222456899999999999999999999999999876332 222221 3578999999999999
Q ss_pred HhHHHHHHHHhhCCceEEEcCCCCHHHHHHHHHhcCccEEEecHHHHHHHHhcC--------------------------
Q 043601 247 FGLSFVVYAQLQKGNCVVSMRKFDLETALRAIEKYRVTHWWVVPPIILALAKNV-------------------------- 300 (488)
Q Consensus 247 ~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~-------------------------- 300 (488)
+++.. .+.+++.|+++++.. .++..+++.|++++||+++++|.+++.+....
T Consensus 279 ~~~~~-~~~~l~~G~~v~~~~-~~~~~~~~~i~~~~~T~~~~vP~~~~~l~~~~~~~~~~~~~~~~~l~~~a~~~~~~~~ 356 (660)
T PLN02861 279 YDQVI-ETYCISKGASIGFWQ-GDIRYLMEDVQALKPTIFCGVPRVYDRIYTGIMQKISSGGMLRKKLFDFAYNYKLGNL 356 (660)
T ss_pred HHHHH-HHHHHHhCCEEEEeC-CCHHHHHHHHHHhCCcEEeechHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHH
Confidence 99854 555799999998874 58899999999999999999999999886410
Q ss_pred ----------CccCCC-------CC-CCccEEEEccCCCcHHHHHHHHhhCCCCeEEeccCcccccccccccCCCCCCCC
Q 043601 301 ----------SLVKKF-------DL-SSLKGIGSGAAPLRKELVEECSKNLPTVTVFQGYGMTETCGVVTVENPLLGVQN 362 (488)
Q Consensus 301 ----------~~~~~~-------~l-~~lr~v~~~G~~l~~~~~~~~~~~~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~ 362 (488)
...... .+ .++|.+++||+++++++. .|.+.++...+++.||+||+++.++...... ...
T Consensus 357 ~~~~~~~~~~~~~~~~~~~~~r~~lg~~lr~~~~Ggapl~~~~~-~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~-~~~ 434 (660)
T PLN02861 357 RKGLKQEEASPRLDRLVFDKIKEGLGGRVRLLLSGAAPLPRHVE-EFLRVTSCSVLSQGYGLTESCGGCFTSIANV-FSM 434 (660)
T ss_pred hcCCCCcCccHhHHHHHHHHHHHHhCCcEEEEEECCCCCCHHHH-HHHHHHcCCCeeEecchhhhhhceeeccccc-CCC
Confidence 000000 11 579999999999999975 4666666457999999999986555433221 235
Q ss_pred CCceeecCCCceEEEEeC-CCC-CCCCCCCcceEEEecC--------------------CccccceEEEccCCcEEEEcc
Q 043601 363 SGSTGTLVAGVEAQIVCV-DTL-KPLPPNQVGELWVRGP--------------------ILMPGDLGYFDEHGQLFIVDR 420 (488)
Q Consensus 363 ~~~~g~~~~~~~~~i~d~-~~~-~~~~~g~~Gel~v~g~--------------------~~~tGD~~~~~~~g~l~~~GR 420 (488)
.+++|+|+|+++++|+|. +.| ..++.++.|||+++|+ |++|||+|++|+||+|+|.||
T Consensus 435 ~gsvG~p~p~~ev~i~d~~~~g~~~~~~~~~GEi~vrGp~v~~GY~~~pe~T~~~f~dGw~~TGDlg~~d~dG~l~i~GR 514 (660)
T PLN02861 435 VGTVGVPMTTIEARLESVPEMGYDALSDVPRGEICLRGNTLFSGYHKRQDLTEEVLIDGWFHTGDIGEWQPNGAMKIIDR 514 (660)
T ss_pred CCCccCccCceEEEEEEccccCcccCCCCCceeEEEcCCcccccccCCHHHHHhhhhccCcccCceEEECCCCcEEEEec
Confidence 679999999999999983 334 3445667899999986 789999999999999999999
Q ss_pred cCcceee-CcEEe---eHhHHHhcCCCeeeeEEEeecCCCCCceEEEEEEeC
Q 043601 421 IKELIKC-NGFQV---ELEGVLVSHPEILDAVVIPFPDPEAGEVPIAYVVRS 468 (488)
Q Consensus 421 ~~d~i~~-~G~~v---~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~ 468 (488)
+||+||+ +|++| +||+++.+||.|.+++|++.+. ++.++|+|++.
T Consensus 515 ~kd~Ik~~~G~~I~p~eIE~~l~~~p~V~~a~V~G~~~---~~~~~A~vv~~ 563 (660)
T PLN02861 515 KKNIFKLSQGEYVAVENLENTYSRCPLIASIWVYGNSF---ESFLVAVVVPD 563 (660)
T ss_pred cccceEcCCCeEEcHHHHHHHHhcCCCeeEEEEEecCC---cceeEEEEEcC
Confidence 9999997 79999 9999999999999999999763 35789999875
No 28
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=3.7e-59 Score=473.91 Aligned_cols=450 Identities=32% Similarity=0.471 Sum_probs=383.1
Q ss_pred CCCHHHHHhhccccCCCceEEEeCCCCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHHcCCe
Q 043601 26 NLSMVHFLFRNSASYGSKSALIDADSGESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQFPICLLGVIAIGGI 105 (488)
Q Consensus 26 ~~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~ 105 (488)
..++.+.|.++++.+|+++|+.+. ++++||+||++.+.++|+.|.+.|+++|++|+++++|++++++++|||+++|++
T Consensus 4 ~~~i~~~l~~~~~~~~~~~a~~~~--~~~~Ty~~l~~~~~~~a~~L~~~gv~~g~~V~l~~~~~~~~~~~~la~~~~G~~ 81 (513)
T PRK07656 4 WMTLPELLARAARRFGDKEAYVFG--DQRLTYAELNARVRRAAAALAALGIGKGDRVAIWAPNSPHWVIAALGALKAGAV 81 (513)
T ss_pred cccHHHHHHHHHHHCCCCeEEEeC--CCceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHhcCeE
Confidence 368999999999999999999997 789999999999999999999999999999999999999999999999999999
Q ss_pred EeecCCCCCHHHHHHHHhhcCCeEEEEccccHHHHhcc-----CCCeEEEcccCcccCCCCcCCCCccchHHHHhhcCCC
Q 043601 106 ATTANPVYTVSELSKQVKDSSPKLVVTVPELWERVKDF-----NIPAVLLGSNHIVSPRGLRSSSNIVYFDELIELSGNA 180 (488)
Q Consensus 106 ~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (488)
++|+++..+.+.+..+++.++++++++++......... ....+......... .......+++++.....
T Consensus 82 ~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~-- 155 (513)
T PRK07656 82 VVPLNTRYTADEAAYILARGDAKALFVLGLFLGVDYSATTRLPALEHVVICETEEDD----PHTEKMKTFTDFLAAGD-- 155 (513)
T ss_pred EEecCcccCHHHHHHHHhhcCceEEEEchhhHHHHHHHHhccCCccEEEEEcCcccc----cCccccccHHHHHhcCC--
Confidence 99999999999999999999999999998765544322 11222222111100 00112234566654332
Q ss_pred CCCCCCCCCCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHhhhhhhcCCCCcEEEEecchhhHHhHHHHHHHHhhCC
Q 043601 181 SNFPDVSVKQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTAMDQELAGALDYVTLCVLPMFHVFGLSFVVYAQLQKG 260 (488)
Q Consensus 181 ~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G 260 (488)
..........+++++++|||||||.||+|.++|.++... .......+...+++++++.+|++|.+++...++.++..|
T Consensus 156 ~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G 233 (513)
T PRK07656 156 PAERAPEVDPDDVADILFTSGTTGRPKGAMLTHRQLLSN--AADWAEYLGLTEGDRYLAANPFFHVFGYKAGVNAPLMRG 233 (513)
T ss_pred CCCCcCCCCCCceEEEEeCCCCCCCCCEEEEecHHHHHH--HHHHHHhhCCCCCCeEEEccchHHHHHHHHHHHHHHHcC
Confidence 122334467789999999999999999999999999876 333555667788999999999999999877889999999
Q ss_pred ceEEEcCCCCHHHHHHHHHhcCccEEEecHHHHHHHHhcCCccCCCCCCCccEEEEccCCCcHHHHHHHHhhCCCC-eEE
Q 043601 261 NCVVSMRKFDLETALRAIEKYRVTHWWVVPPIILALAKNVSLVKKFDLSSLKGIGSGAAPLRKELVEECSKNLPTV-TVF 339 (488)
Q Consensus 261 ~~~~~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~-~i~ 339 (488)
+++++.+..++..+++.++++++|+++++|+++..+++. .......++++|.+++||+++++++++.|.+.++ . .++
T Consensus 234 ~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~-~~~~~~~~~~l~~v~~~g~~~~~~~~~~~~~~~~-~~~~~ 311 (513)
T PRK07656 234 ATILPLPVFDPDEVFRLIETERITVLPGPPTMYNSLLQH-PDRSAEDLSSLRLAVTGAASMPVALLERFESELG-VDIVL 311 (513)
T ss_pred ceEEecCcCCHHHHHHHHHHhCCeEEechHHHHHHHHcC-CCcCCCCccceeeEEecCCCCCHHHHHHHHHHcC-CCceE
Confidence 999998888999999999999999999999999999987 4445567889999999999999999999999997 6 899
Q ss_pred eccCcccccccccccCCCCC-CCCCCceeecCCCceEEEEeCCCCCCCCCCCcceEEEecC-------------------
Q 043601 340 QGYGMTETCGVVTVENPLLG-VQNSGSTGTLVAGVEAQIVCVDTLKPLPPNQVGELWVRGP------------------- 399 (488)
Q Consensus 340 ~~YG~tE~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~------------------- 399 (488)
+.||+||++++++.+..... .....++|+|++++.++++| +++++++.|+.|||+++|+
T Consensus 312 ~~YG~tE~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~i~d-~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~ 390 (513)
T PRK07656 312 TGYGLSEASGVTTFNRLDDDRKTVAGTIGTAIAGVENKIVN-ELGEEVPVGEVGELLVRGPNVMKGYYDDPEATAAAIDA 390 (513)
T ss_pred eEEccccCCCceeecCccccccccCCCccccCCCcEEEEEC-CCCCCCCCCCceEEEEEcchhhhhhcCCHHHHhhhhcc
Confidence 99999999877766543321 12267899999999999999 5789999999999999864
Q ss_pred --CccccceEEEccCCcEEEEcccCcceeeCcEEe---eHhHHHhcCCCeeeeEEEeecCCCCCceEEEEEEeCCCCCCC
Q 043601 400 --ILMPGDLGYFDEHGQLFIVDRIKELIKCNGFQV---ELEGVLVSHPEILDAVVIPFPDPEAGEVPIAYVVRSPNSSLT 474 (488)
Q Consensus 400 --~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v---~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~ 474 (488)
||.|||+|+++++|.+++.||.+|+++++|.++ +||+++.++++|.+++|++.++...++.++++|+.+++...+
T Consensus 391 ~~~~~tGDl~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~ 470 (513)
T PRK07656 391 DGWLHTGDLGRLDEEGYLYIVDRKKDMFIVGGFNVYPAEVEEVLYEHPAVAEAAVIGVPDERLGEVGKAYVVLKPGAELT 470 (513)
T ss_pred CCceeccceEEEcCCeeEEEEecccceEEeCCEEeCHHHHHHHHHhCCCeeEEEEEecCCcccCceEEEEEEECCCCCCC
Confidence 588999999999999999999999999999999 999999999999999999999888888999999998766788
Q ss_pred HHHHHHHHHhhcCC
Q 043601 475 KEDVQKFVANDSQL 488 (488)
Q Consensus 475 ~~~i~~~~~~~l~~ 488 (488)
.++++++++++|+.
T Consensus 471 ~~~l~~~~~~~l~~ 484 (513)
T PRK07656 471 EEELIAYCREHLAK 484 (513)
T ss_pred HHHHHHHHHhhccc
Confidence 89999999998763
No 29
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.6e-59 Score=481.91 Aligned_cols=455 Identities=29% Similarity=0.422 Sum_probs=376.7
Q ss_pred CCCHHHHHhhccccCCCceEEEeCCCCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHHcCCe
Q 043601 26 NLSMVHFLFRNSASYGSKSALIDADSGESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQFPICLLGVIAIGGI 105 (488)
Q Consensus 26 ~~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~ 105 (488)
.+|+.+++.++++++|+++|+.+. ++.+||+||+++++++|++|.+.|+++||+|+++++|++++++++|||+++|++
T Consensus 31 ~~~l~~~~~~~~~~~p~~~a~~~~--~~~~Ty~ql~~~~~~~A~~L~~~gi~~gd~V~l~~~n~~~~~~~~lA~~~~G~~ 108 (573)
T PRK05605 31 DTTLVDLYDNAVARFGDRPALDFF--GATTTYAELGKQVRRAAAGLRALGVRPGDRVAIVLPNCPQHIVAFYAVLRLGAV 108 (573)
T ss_pred cCCHHHHHHHHHHHCCCCeEEEeC--CCcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHhcCcE
Confidence 468999999999999999999986 789999999999999999999999999999999999999999999999999999
Q ss_pred EeecCCCCCHHHHHHHHhhcCCeEEEEccccHHHHhcc----CCCeE-EEcccCcccC------------------CCCc
Q 043601 106 ATTANPVYTVSELSKQVKDSSPKLVVTVPELWERVKDF----NIPAV-LLGSNHIVSP------------------RGLR 162 (488)
Q Consensus 106 ~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~----~~~~~-~~~~~~~~~~------------------~~~~ 162 (488)
++|++|.++.+++.++++.++++++|+++.....+... ....+ .+........ ....
T Consensus 109 ~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (573)
T PRK05605 109 VVEHNPLYTAHELEHPFEDHGARVAIVWDKVAPTVERLRRTTPLETIVSVNMIAAMPLLQRLALRLPIPALRKARAALTG 188 (573)
T ss_pred EeecCcCCCHHHHHHHHhccCCcEEEechhhHHHHHhhhhccccceeEeeeccccccccccccccccccccccccccccc
Confidence 99999999999999999999999999987765544322 11111 1110000000 0001
Q ss_pred CCCCccchHHHHhhcCCCC--CCCCCCCCCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHhhhhhhc--CCCCcEEE
Q 043601 163 SSSNIVYFDELIELSGNAS--NFPDVSVKQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTAMDQELA--GALDYVTL 238 (488)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~--~~~~~~~~ 238 (488)
...+...++++........ .........+++++++|||||||.||+|.+||.++...+.. ...... ...+++++
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~--~~~~~~~~~~~~~~~~ 266 (573)
T PRK05605 189 PAPGTVPWETLVDAAIGGDGSDVSHPRPTPDDVALILYTSGTTGKPKGAQLTHRNLFANAAQ--GKAWVPGLGDGPERVL 266 (573)
T ss_pred CCCcceeHHHHhhccccccccccCCCCCCCCCEEEEEcCCCCCCCCcEEEEecHHHHHHHHH--HHhhccccCCCCcEEE
Confidence 1123334555543321100 01223356789999999999999999999999999876332 222211 23478999
Q ss_pred EecchhhHHhHHHHHHHHhhCCceEEEcCCCCHHHHHHHHHhcCccEEEecHHHHHHHHhcCCccCCCCCCCccEEEEcc
Q 043601 239 CVLPMFHVFGLSFVVYAQLQKGNCVVSMRKFDLETALRAIEKYRVTHWWVVPPIILALAKNVSLVKKFDLSSLKGIGSGA 318 (488)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~v~~~G 318 (488)
+.+|++|.+|+...++.++..|+++++.+..++..+++.++++++|++.++|+.++.+.+. .......++++|.+++||
T Consensus 267 ~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~-~~~~~~~~~~lr~i~~gg 345 (573)
T PRK05605 267 AALPMFHAYGLTLCLTLAVSIGGELVLLPAPDIDLILDAMKKHPPTWLPGVPPLYEKIAEA-AEERGVDLSGVRNAFSGA 345 (573)
T ss_pred EecChHHHHHHHHHHHHHHHcCCEEEEeCCCCHHHHHHHHHHhCCEEEEchHHHHHHHHhC-ccccCCCchhccEEEECC
Confidence 9999999999877788889999999999888999999999999999999999999999987 444556788999999999
Q ss_pred CCCcHHHHHHHHhhCCCCeEEeccCcccccccccccCCCCCCCCCCceeecCCCceEEEEeCCC-CCCCCCCCcceEEEe
Q 043601 319 APLRKELVEECSKNLPTVTVFQGYGMTETCGVVTVENPLLGVQNSGSTGTLVAGVEAQIVCVDT-LKPLPPNQVGELWVR 397 (488)
Q Consensus 319 ~~l~~~~~~~~~~~~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d~~~-~~~~~~g~~Gel~v~ 397 (488)
+++++++.+.|.+.++ ..+++.||+||+++++...... .....+++|+|++++.++|+|+++ +.+++.|+.|||+++
T Consensus 346 ~~l~~~~~~~~~~~~~-~~i~~~YG~TE~~~~~~~~~~~-~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~~g~~Gel~v~ 423 (573)
T PRK05605 346 MALPVSTVELWEKLTG-GLLVEGYGLTETSPIIVGNPMS-DDRRPGYVGVPFPDTEVRIVDPEDPDETMPDGEEGELLVR 423 (573)
T ss_pred CcCCHHHHHHHHHHhC-CCeecccccchhchhhhcCCcc-cCCcCCccccCCCCCEEEEEcCCCCCccCCCCCeeEEEEe
Confidence 9999999999999886 8999999999998776654332 234567899999999999999766 688999999999998
Q ss_pred cC--------------------CccccceEEEccCCcEEEEcccCcceeeCcEEe---eHhHHHhcCCCeeeeEEEeecC
Q 043601 398 GP--------------------ILMPGDLGYFDEHGQLFIVDRIKELIKCNGFQV---ELEGVLVSHPEILDAVVIPFPD 454 (488)
Q Consensus 398 g~--------------------~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v---~ie~~l~~~~~v~~~~v~~~~~ 454 (488)
|+ ||+|||+|+++++|++++.||.+|+++.+|.+| +||+++.+++.|.+++|++.++
T Consensus 424 ~~~~~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~i~gR~dd~i~~~G~~v~p~eIE~~l~~~~~i~~~~v~~~~~ 503 (573)
T PRK05605 424 GPQVFKGYWNRPEETAKSFLDGWFRTGDVVVMEEDGFIRIVDRIKELIITGGFNVYPAEVEEVLREHPGVEDAAVVGLPR 503 (573)
T ss_pred cCchhhhhcCChhHhhhcccCCCcccCCEEEEcCCCcEEEEeccccceeeCCEEECHHHHHHHHHhCcccceEEEEeeec
Confidence 75 689999999999999999999999999999999 9999999999999999999998
Q ss_pred CCCCceEEEEEEeCCCCCCCHHHHHHHHHhhcC
Q 043601 455 PEAGEVPIAYVVRSPNSSLTKEDVQKFVANDSQ 487 (488)
Q Consensus 455 ~~~~~~~~~~v~~~~~~~~~~~~i~~~~~~~l~ 487 (488)
...++.++++|++.++...+.++++++++++|+
T Consensus 504 ~~~~~~~~~~vv~~~~~~~~~~~l~~~~~~~l~ 536 (573)
T PRK05605 504 EDGSEEVVAAVVLEPGAALDPEGLRAYCREHLT 536 (573)
T ss_pred ccCCeEEEEEEEECCCCCCCHHHHHHHHHHhCc
Confidence 888899999999988877888999999998875
No 30
>PRK06060 acyl-CoA synthetase; Validated
Probab=100.00 E-value=9.5e-60 Score=493.40 Aligned_cols=429 Identities=21% Similarity=0.281 Sum_probs=358.0
Q ss_pred CCHHHHHhhcccc--CCCceEEEeCCCCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHHcCC
Q 043601 27 LSMVHFLFRNSAS--YGSKSALIDADSGESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQFPICLLGVIAIGG 104 (488)
Q Consensus 27 ~~l~~~l~~~a~~--~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~ 104 (488)
.|+.++|.+++++ +|+++|+++. ..+||+||+++++++|++|.+.|+++|++|+++++|++++++++|||+++|+
T Consensus 4 ~~~~~~~~~~a~~~~~pd~~a~~~~---~~~Ty~eL~~~~~~lA~~L~~~g~~~g~~V~i~~~~~~~~~~~~la~~~aG~ 80 (705)
T PRK06060 4 GNLAGLLAEQASEAGWYDRPAFYAA---DVVTHGQIHDGAARLGEVLRNRGLSSGDRVLLCLPDSPDLVQLLLACLARGV 80 (705)
T ss_pred cCHHHHHHHHHhhccCCCceEEEec---CceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhCc
Confidence 3788999998876 7999999864 4799999999999999999999999999999999999999999999999999
Q ss_pred eEeecCCCCCHHHHHHHHhhcCCeEEEEccccHHHHhccCCCeEEEcccCcccCCCCcCCCCccchHHHHhhcCCCCCCC
Q 043601 105 IATTANPVYTVSELSKQVKDSSPKLVVTVPELWERVKDFNIPAVLLGSNHIVSPRGLRSSSNIVYFDELIELSGNASNFP 184 (488)
Q Consensus 105 ~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (488)
+++|++|.++.+++.++++.++++++|++.+....+.... .. ...+++..........
T Consensus 81 ~~vpi~p~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~----~~------------------~~~~~~~~~~~~~~~~ 138 (705)
T PRK06060 81 MAFLANPELHRDDHALAARNTEPALVVTSDALRDRFQPSR----VA------------------EAAELMSEAARVAPGG 138 (705)
T ss_pred EEEecCCCCCHHHHHHHHhcCCCcEEEEchHHhhhhcccc----cc------------------hhhhhhhhccccCCCC
Confidence 9999999999999999999999999999876554432210 00 0111111100001111
Q ss_pred CCCCCCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHhhhhhhcCCCCcEEEEecchhhHHhHHHHHHHHhhCCceEE
Q 043601 185 DVSVKQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTAMDQELAGALDYVTLCVLPMFHVFGLSFVVYAQLQKGNCVV 264 (488)
Q Consensus 185 ~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~ 264 (488)
.....++++++++|||||||.||+|+++|.++....... ....+...+.+++++..|++|..++...++.++..|++++
T Consensus 139 ~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~~~~~~~~~-~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~l~~G~~~v 217 (705)
T PRK06060 139 YEPMGGDALAYATYTSGTTGPPKAAIHRHADPLTFVDAM-CRKALRLTPEDTGLCSARMYFAYGLGNSVWFPLATGGSAV 217 (705)
T ss_pred CCCCCCCCeEEEEECCCCCCCCcEEEEccccHHHHHHHH-HHHhhCCCCcceeEEeccchhhcchhHHHHHHHhcCCEEE
Confidence 123456899999999999999999999999998763221 1234556788999999999999887667888999999999
Q ss_pred EcC-CCCHHHHHHHHHhcCccEEEecHHHHHHHHhcCCccCCCCCCCccEEEEccCCCcHHHHHHHHhhCCCCeEEeccC
Q 043601 265 SMR-KFDLETALRAIEKYRVTHWWVVPPIILALAKNVSLVKKFDLSSLKGIGSGAAPLRKELVEECSKNLPTVTVFQGYG 343 (488)
Q Consensus 265 ~~~-~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~i~~~YG 343 (488)
+.+ ..++..++..++++++|+++++|+++..+++. . ....+++||.+++|||++++++.++|.+.|+++++++.||
T Consensus 218 ~~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~-~--~~~~~~slr~i~~gGe~l~~~~~~~~~~~~~~~~~~~~YG 294 (705)
T PRK06060 218 INSAPVTPEAAAILSARFGPSVLYGVPNFFARVIDS-C--SPDSFRSLRCVVSAGEALELGLAERLMEFFGGIPILDGIG 294 (705)
T ss_pred EeCCCCCHHHHHHHHHhcCCeEEeeHHHHHHHHHHh-c--ccccccceeEEEEecCcCCHHHHHHHHHHcCCCceEeeee
Confidence 886 47888899999999999999999999999875 2 2345789999999999999999999999998789999999
Q ss_pred cccccccccccCCCCCCCCCCceeecCCCceEEEEeCCCCCCCCCCCcceEEEecC------------------Cccccc
Q 043601 344 MTETCGVVTVENPLLGVQNSGSTGTLVAGVEAQIVCVDTLKPLPPNQVGELWVRGP------------------ILMPGD 405 (488)
Q Consensus 344 ~tE~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~------------------~~~tGD 405 (488)
+||++..+...... .....++|+|++++.++|+| +++++++.|+.|||+++|+ ||+|||
T Consensus 295 ~tE~~~~~~~~~~~--~~~~~~iG~p~~~~~v~i~d-~~g~~~~~g~~GEl~i~g~~v~~GY~~~~~~~~~~~~~~~TGD 371 (705)
T PRK06060 295 STEVGQTFVSNRVD--EWRLGTLGRVLPPYEIRVVA-PDGTTAGPGVEGDLWVRGPAIAKGYWNRPDSPVANEGWLDTRD 371 (705)
T ss_pred ccccCceEEeccCC--CCCcCcccccCCCcEEEEEC-CCCCCCCCCCceEEEEccchhhhhhhCCCcccccCCCcEECCe
Confidence 99998655433222 33567899999999999999 5789999999999999983 689999
Q ss_pred eEEEccCCcEEEEcccCcceeeCcEEe---eHhHHHhcCCCeeeeEEEeecCCCCCceEEEEEEeCCCCCCCH---HHHH
Q 043601 406 LGYFDEHGQLFIVDRIKELIKCNGFQV---ELEGVLVSHPEILDAVVIPFPDPEAGEVPIAYVVRSPNSSLTK---EDVQ 479 (488)
Q Consensus 406 ~~~~~~~g~l~~~GR~~d~i~~~G~~v---~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~---~~i~ 479 (488)
+|++++||++++.||+||+||++|++| +||.++.+++.|.+++|++.++..+++.++++|+..++...+. ++++
T Consensus 372 l~~~~~dG~l~~~GR~dd~ik~~G~~v~~~eIE~~l~~~~~V~~a~vv~~~~~~~~~~~~a~vv~~~~~~~~~~~~~~i~ 451 (705)
T PRK06060 372 RVCIDSDGWVTYRCRADDTEVIGGVNVDPREVERLIIEDEAVAEAAVVAVRESTGASTLQAFLVATSGATIDGSVMRDLH 451 (705)
T ss_pred eEEECCCceEEEecccCceEEECCEEECHHHHHHHHHhCCCeeEEEEEeecCccCCeeEEEEEEeccccCcChHHHHHHH
Confidence 999999999999999999999999999 9999999999999999999998888889999999876654443 5788
Q ss_pred HHHHhhcC
Q 043601 480 KFVANDSQ 487 (488)
Q Consensus 480 ~~~~~~l~ 487 (488)
++++++|+
T Consensus 452 ~~l~~~L~ 459 (705)
T PRK06060 452 RGLLNRLS 459 (705)
T ss_pred HHHHHhCC
Confidence 89988886
No 31
>PRK07638 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2e-59 Score=472.07 Aligned_cols=425 Identities=22% Similarity=0.313 Sum_probs=359.3
Q ss_pred CCHHHHHhhccccCCCceEEEeCCCCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHHcCCeE
Q 043601 27 LSMVHFLFRNSASYGSKSALIDADSGESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQFPICLLGVIAIGGIA 106 (488)
Q Consensus 27 ~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~ 106 (488)
|++.++|.++++++|+++|+.+. +.++||.||.++++++|++|.+.|. +|++|+|+++|++++++++|||+++|+++
T Consensus 1 ~~~~~~~~~~a~~~p~~~a~~~~--~~~~Ty~~l~~~~~~~a~~L~~~~~-~~~~v~i~~~~~~~~~~~~la~~~~G~~~ 77 (487)
T PRK07638 1 MGITKEYKKHASLQPNKIAIKEN--DRVLTYKDWFESVCKVANWLNEKES-KNKTIAILLENRIEFLQLFAGAAMAGWTC 77 (487)
T ss_pred CChHHHHHHHHHhCCCCeEEecC--CcEeeHHHHHHHHHHHHHHHHHhCC-CCCEEEEEcCCCHHHHHHHHHHHHcCeEE
Confidence 67899999999999999999987 7899999999999999999999884 89999999999999999999999999999
Q ss_pred eecCCCCCHHHHHHHHhhcCCeEEEEccccHHHHhccCCCeEEEcccCcccCCCCcCCCCccchHHHHhhcCCCCCCCCC
Q 043601 107 TTANPVYTVSELSKQVKDSSPKLVVTVPELWERVKDFNIPAVLLGSNHIVSPRGLRSSSNIVYFDELIELSGNASNFPDV 186 (488)
Q Consensus 107 v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (488)
+|+++.++.+++.++++.++++.++++......+.......+... .+.+...... ......
T Consensus 78 v~l~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~--~~~~~~ 138 (487)
T PRK07638 78 VPLDIKWKQDELKERLAISNADMIVTERYKLNDLPDEEGRVIEID-----------------EWKRMIEKYL--PTYAPI 138 (487)
T ss_pred EecCccCCHHHHHHHHHhCCCCEEEEecccccchhhccceEEEeh-----------------hhhhhhhhcc--cccccc
Confidence 999999999999999999999999999866554432222111111 1111111111 111112
Q ss_pred CCCCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHhhhhhhcCCCCcEEEEecchhhHHhHHHHHHHHhhCCceEEEc
Q 043601 187 SVKQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTAMDQELAGALDYVTLCVLPMFHVFGLSFVVYAQLQKGNCVVSM 266 (488)
Q Consensus 187 ~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~ 266 (488)
....+++++|+|||||||.||+|+++|+++.... ......+...++|+++...|++|..++ ..++.++..|+++++.
T Consensus 139 ~~~~~~~a~i~~TSGtTG~PKgv~~s~~~~~~~~--~~~~~~~~~~~~d~~~~~~~l~~~~~l-~~~~~~l~~g~~~~~~ 215 (487)
T PRK07638 139 ENVQNAPFYMGFTSGSTGKPKAFLRAQQSWLHSF--DCNVHDFHMKREDSVLIAGTLVHSLFL-YGAISTLYVGQTVHLM 215 (487)
T ss_pred ccCCCCcEEEEeCCCCCCCCcEEEEecHHHHHHH--HHHHHhcCcCCCCEEEEeecchHHHHH-HHHHHHHccCcEEEEc
Confidence 2235678999999999999999999999998763 334455667888999999999998877 7788899999999999
Q ss_pred CCCCHHHHHHHHHhcCccEEEecHHHHHHHHhcCCccCCCCCCCccEEEEccCCCcHHHHHHHHhhCCCCeEEeccCccc
Q 043601 267 RKFDLETALRAIEKYRVTHWWVVPPIILALAKNVSLVKKFDLSSLKGIGSGAAPLRKELVEECSKNLPTVTVFQGYGMTE 346 (488)
Q Consensus 267 ~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~i~~~YG~tE 346 (488)
+.+++..+++.++++++|++.++|+++..+.+. . . ...+.+.++++|+++++++.+++.+.|+++++++.||+||
T Consensus 216 ~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~-~---~-~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~~~~~~YG~tE 290 (487)
T PRK07638 216 RKFIPNQVLDKLETENISVMYTVPTMLESLYKE-N---R-VIENKMKIISSGAKWEAEAKEKIKNIFPYAKLYEFYGASE 290 (487)
T ss_pred CCCCHHHHHHHHHHcCCeEEEeCcHHHHHHHhC-c---C-cCCceeEEEEcCCCCCHHHHHHHHHHcCCCeEEEEecCCc
Confidence 989999999999999999999999999999876 2 1 2345566788999999999999999998899999999999
Q ss_pred ccccccccCCCCCCCCCCceeecCCCceEEEEeCCCCCCCCCCCcceEEEecC--------------------Cccccce
Q 043601 347 TCGVVTVENPLLGVQNSGSTGTLVAGVEAQIVCVDTLKPLPPNQVGELWVRGP--------------------ILMPGDL 406 (488)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~--------------------~~~tGD~ 406 (488)
++.++..... .......++|+|++++.++|+| ++|++++.|+.|||+++|+ |+.|||+
T Consensus 291 ~~~~~~~~~~-~~~~~~~~~G~~~~~~~~~i~d-~~g~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGDl 368 (487)
T PRK07638 291 LSFVTALVDE-ESERRPNSVGRPFHNVQVRICN-EAGEEVQKGEIGTVYVKSPQFFMGYIIGGVLARELNADGWMTVRDV 368 (487)
T ss_pred cCceEEeccc-ccCCCCCCCCcccCCcEEEEEC-CCCCCCCCCCCeEEEEecccceeeecCCHHHHhhhccCCcEecCcc
Confidence 9976654432 2245667899999999999999 6899999999999999985 6789999
Q ss_pred EEEccCCcEEEEcccCcceeeCcEEe---eHhHHHhcCCCeeeeEEEeecCCCCCceEEEEEEeCCCCCCCHHHHHHHHH
Q 043601 407 GYFDEHGQLFIVDRIKELIKCNGFQV---ELEGVLVSHPEILDAVVIPFPDPEAGEVPIAYVVRSPNSSLTKEDVQKFVA 483 (488)
Q Consensus 407 ~~~~~~g~l~~~GR~~d~i~~~G~~v---~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~~~~ 483 (488)
++++++|++++.||++|+||.+|.+| +||+++.++|+|.+++|++.+++..++.++++|.. ..+.++++++++
T Consensus 369 ~~~d~~g~l~i~GR~~d~i~~~G~~v~~~eiE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~----~~~~~~l~~~~~ 444 (487)
T PRK07638 369 GYEDEEGFIYIVGREKNMILFGGINIFPEEIESVLHEHPAVDEIVVIGVPDSYWGEKPVAIIKG----SATKQQLKSFCL 444 (487)
T ss_pred EeEcCCCeEEEEecCCCeEEeCCEEECHHHHHHHHHhCCCeeeEEEEecCchhcCCeeEEEEEC----CCCHHHHHHHHH
Confidence 99999999999999999999999999 99999999999999999999998888888888874 357889999999
Q ss_pred hhcC
Q 043601 484 NDSQ 487 (488)
Q Consensus 484 ~~l~ 487 (488)
++|+
T Consensus 445 ~~l~ 448 (487)
T PRK07638 445 QRLS 448 (487)
T ss_pred HHhh
Confidence 8875
No 32
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=100.00 E-value=5.4e-59 Score=473.75 Aligned_cols=442 Identities=25% Similarity=0.343 Sum_probs=370.9
Q ss_pred CCCCHHHHHhhccccCCCceEEEeCCCCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHHcCC
Q 043601 25 PNLSMVHFLFRNSASYGSKSALIDADSGESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQFPICLLGVIAIGG 104 (488)
Q Consensus 25 ~~~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~ 104 (488)
.+.++.++|.++++.+|+++|+++. ++.+||+||++++.++|..|.+.|+++|++|+++++|++++++++|||+++|+
T Consensus 19 ~~~~l~~~l~~~a~~~p~~~a~~~~--~~~~Ty~el~~~v~~la~~L~~~gi~~g~~V~v~~~n~~~~~~~~lA~~~~G~ 96 (542)
T PRK06155 19 SERTLPAMLARQAERYPDRPLLVFG--GTRWTYAEAARAAAAAAHALAAAGVKRGDRVALMCGNRIEFLDVFLGCAWLGA 96 (542)
T ss_pred cccCHHHHHHHHHHHCCCCeEEEeC--CccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHHhCC
Confidence 4578999999999999999999987 78999999999999999999999999999999999999999999999999999
Q ss_pred eEeecCCCCCHHHHHHHHhhcCCeEEEEccccHHHHhccCC-----C-eEEEcccCcccCCCCcCCCCccchHHHHhhcC
Q 043601 105 IATTANPVYTVSELSKQVKDSSPKLVVTVPELWERVKDFNI-----P-AVLLGSNHIVSPRGLRSSSNIVYFDELIELSG 178 (488)
Q Consensus 105 ~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~-----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (488)
+++|+++.++.+++..+++.+++++++++.+....+..... . .+.++.... ......+..... ..
T Consensus 97 ~~vpl~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~-~~ 167 (542)
T PRK06155 97 IAVPINTALRGPQLEHILRNSGARLLVVEAALLAALEAADPGDLPLPAVWLLDAPAS--------VSVPAGWSTAPL-PP 167 (542)
T ss_pred EEEEeccccCHHHHHHHHHhcCceEEEEChhhHHHHHHhcccccCcceEEEecCccc--------cccccccchhhh-cc
Confidence 99999999999999999999999999999877666544321 1 122111100 000001110000 00
Q ss_pred CCCCCCCCCCCCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHhhhhhhcCCCCcEEEEecchhhHHhHHHHHHHHhh
Q 043601 179 NASNFPDVSVKQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTAMDQELAGALDYVTLCVLPMFHVFGLSFVVYAQLQ 258 (488)
Q Consensus 179 ~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 258 (488)
...........++++++|+|||||||.||+|+++|.++.... ......+...+++++++.+|++|..++ ..++.++.
T Consensus 168 ~~~~~~~~~~~~~~~a~il~TSGTTG~PK~V~~t~~~~~~~~--~~~~~~~~~~~~~~~l~~~pl~~~~~~-~~~~~~l~ 244 (542)
T PRK06155 168 LDAPAPAAAVQPGDTAAILYTSGTTGPSKGVCCPHAQFYWWG--RNSAEDLEIGADDVLYTTLPLFHTNAL-NAFFQALL 244 (542)
T ss_pred cCCCCCCCCCCCCCeEEEEECCCCCCCCcEEEEEHHHHHHHH--HHHHHhcCCCCCCEEEEecCHHHHHHH-HHHHHHHH
Confidence 001112234567899999999999999999999999997763 224455667889999999999999998 56789999
Q ss_pred CCceEEEcCCCCHHHHHHHHHhcCccEEEecHHHHHHHHhcCCccCCCCCCCccEEEEccCCCcHHHHHHHHhhCCCCeE
Q 043601 259 KGNCVVSMRKFDLETALRAIEKYRVTHWWVVPPIILALAKNVSLVKKFDLSSLKGIGSGAAPLRKELVEECSKNLPTVTV 338 (488)
Q Consensus 259 ~G~~~~~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~i 338 (488)
.|+++++.+.+++..+++.|+++++|+++++|+++..+.+. ........+++|.++.+| +++.+.+.+.+.++ +.+
T Consensus 245 ~G~~~~~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~-~~~~~~~~~~l~~~~~g~--~~~~~~~~~~~~~~-~~v 320 (542)
T PRK06155 245 AGATYVLEPRFSASGFWPAVRRHGATVTYLLGAMVSILLSQ-PARESDRAHRVRVALGPG--VPAALHAAFRERFG-VDL 320 (542)
T ss_pred cCceEEeeCCCCHHHHHHHHHHhCCcEEEchHHHHHHHHcC-cCccccccCceEEEEEcC--CCHHHHHHHHHHcC-CCE
Confidence 99999999989999999999999999999999999998876 444455677899877665 57899999999986 899
Q ss_pred EeccCcccccccccccCCCCCCCCCCceeecCCCceEEEEeCCCCCCCCCCCcceEEEecC-------------------
Q 043601 339 FQGYGMTETCGVVTVENPLLGVQNSGSTGTLVAGVEAQIVCVDTLKPLPPNQVGELWVRGP------------------- 399 (488)
Q Consensus 339 ~~~YG~tE~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~------------------- 399 (488)
++.||+||++..+..... ....+++|.|.+++.++|+| +++++++.|+.|||+++|+
T Consensus 321 ~~~YG~tE~~~~~~~~~~---~~~~~~vG~~~~~~~~~i~d-~~~~~~~~g~~Gei~v~~~~~~~~~~GY~~~~~~~~~~ 396 (542)
T PRK06155 321 LDGYGSTETNFVIAVTHG---SQRPGSMGRLAPGFEARVVD-EHDQELPDGEPGELLLRADEPFAFATGYFGMPEKTVEA 396 (542)
T ss_pred EeeecccccCccccCCCC---CCCCCCcCccCCCceEEEEC-CCCCCCCCCCceEEEEecCCccccchhhcCCHHHHHHh
Confidence 999999999876654322 34667899999999999999 5789999999999999985
Q ss_pred ----CccccceEEEccCCcEEEEcccCcceeeCcEEe---eHhHHHhcCCCeeeeEEEeecCCCCCceEEEEEEeCCCCC
Q 043601 400 ----ILMPGDLGYFDEHGQLFIVDRIKELIKCNGFQV---ELEGVLVSHPEILDAVVIPFPDPEAGEVPIAYVVRSPNSS 472 (488)
Q Consensus 400 ----~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v---~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~ 472 (488)
||.|||+|++++||++++.||.+|+|+++|.+| +||+++.++|+|.+++|++.+++..++.+.++++++++..
T Consensus 397 ~~~~~~~TGD~~~~~~dG~l~i~GR~~d~i~~~G~~v~p~eIE~~l~~~~~V~~~~v~~v~~~~~~~~~~~~v~~~~~~~ 476 (542)
T PRK06155 397 WRNLWFHTGDRVVRDADGWFRFVDRIKDAIRRRGENISSFEVEQVLLSHPAVAAAAVFPVPSELGEDEVMAAVVLRDGTA 476 (542)
T ss_pred hcCCcEeccceEEEcCCceEEEEecCCCEEEeCCEEECHHHHHHHHHhCCCeeEEEEEeecccccCceEEEEEEECCCCC
Confidence 688999999999999999999999999999999 9999999999999999999998888889999999988888
Q ss_pred CCHHHHHHHHHhhcCC
Q 043601 473 LTKEDVQKFVANDSQL 488 (488)
Q Consensus 473 ~~~~~i~~~~~~~l~~ 488 (488)
.+..+++++++++|+.
T Consensus 477 ~~~~~~~~~~~~~l~~ 492 (542)
T PRK06155 477 LEPVALVRHCEPRLAY 492 (542)
T ss_pred CCHHHHHHHHHhhCcC
Confidence 8899999999998863
No 33
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=3.2e-59 Score=478.85 Aligned_cols=448 Identities=31% Similarity=0.453 Sum_probs=370.3
Q ss_pred CCHH-HHHhhccc-cCCCceEEEeCC--CCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHHc
Q 043601 27 LSMV-HFLFRNSA-SYGSKSALIDAD--SGESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQFPICLLGVIAI 102 (488)
Q Consensus 27 ~~l~-~~l~~~a~-~~p~~~a~~~~~--~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~ 102 (488)
+++. +.+.++++ .+|+++|+.+.+ ..+.+||+||+++++++|.+|.+.|+++|++|+++++|++++++++|||+++
T Consensus 42 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~la~~~~ 121 (570)
T PRK04319 42 VNIAYEAIDRHADGGRKDKVALRYLDASRKEKYTYKELKELSNKFANVLKELGVEKGDRVFIFMPRIPELYFALLGALKN 121 (570)
T ss_pred eeHHHHHHHHhhccCCCCceEEEEECCCCceeecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHHc
Confidence 5666 46777766 579999998642 2378999999999999999999999999999999999999999999999999
Q ss_pred CCeEeecCCCCCHHHHHHHHhhcCCeEEEEccccHHHHhccC---CCeEEEcccCcccCCCCcCCCCccchHHHHhhcCC
Q 043601 103 GGIATTANPVYTVSELSKQVKDSSPKLVVTVPELWERVKDFN---IPAVLLGSNHIVSPRGLRSSSNIVYFDELIELSGN 179 (488)
Q Consensus 103 G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (488)
|++++|+++.++.+++.++++.++++.+++++.......... ...+++..... .......++.+++....
T Consensus 122 G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~- 194 (570)
T PRK04319 122 GAIVGPLFEAFMEEAVRDRLEDSEAKVLITTPALLERKPADDLPSLKHVLLVGEDV------EEGPGTLDFNALMEQAS- 194 (570)
T ss_pred CcEEcccccccCHHHHHHHHHccCCcEEEEChhhhhccchhcCCCceEEEEECCCc------CCCcCccCHHHHHhhcC-
Confidence 999999999999999999999999999999987654432211 11222211100 01123345666554332
Q ss_pred CCCCCCCCCCCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHhhhhhhcCCCCcEEEEecchhhHHhHHHHHHHHhhC
Q 043601 180 ASNFPDVSVKQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTAMDQELAGALDYVTLCVLPMFHVFGLSFVVYAQLQK 259 (488)
Q Consensus 180 ~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 259 (488)
.........++++++++|||||||.||+|+++|.++.... ......+...+++++++..|++|..++...++.++..
T Consensus 195 -~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~--~~~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~ 271 (570)
T PRK04319 195 -DEFDIEWTDREDGAILHYTSGSTGKPKGVLHVHNAMLQHY--QTGKYVLDLHEDDVYWCTADPGWVTGTSYGIFAPWLN 271 (570)
T ss_pred -CcCCccccCCCCCEEEEeCCCCCCCCCEEEEecHHHHHHH--HHHHHhcCCCCCceEEecCChHHhhCchHHHHHHHhc
Confidence 2223334567899999999999999999999999998763 3344555677889999999999999887888999999
Q ss_pred CceEEEcC-CCCHHHHHHHHHhcCccEEEecHHHHHHHHhcCCc-cCCCCCCCccEEEEccCCCcHHHHHHHHhhCCCCe
Q 043601 260 GNCVVSMR-KFDLETALRAIEKYRVTHWWVVPPIILALAKNVSL-VKKFDLSSLKGIGSGAAPLRKELVEECSKNLPTVT 337 (488)
Q Consensus 260 G~~~~~~~-~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~-~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~ 337 (488)
|+++++.. .+++..+++.++++++|+++++|++++.+.+.... ....++++||.+++||+++++++.+.+.+.++ .+
T Consensus 272 G~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~~~~gG~~l~~~~~~~~~~~~g-~~ 350 (570)
T PRK04319 272 GATNVIDGGRFSPERWYRILEDYKVTVWYTAPTAIRMLMGAGDDLVKKYDLSSLRHILSVGEPLNPEVVRWGMKVFG-LP 350 (570)
T ss_pred CceEEEECCCCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhcCCcccccCCcccceEEEEcccCCCHHHHHHHHHHhC-CC
Confidence 99998875 57899999999999999999999999999875211 23456889999999999999999999999887 89
Q ss_pred EEeccCcccccccccccCCCCCCCCCCceeecCCCceEEEEeCCCCCCCCCCCcceEEEec--C----------------
Q 043601 338 VFQGYGMTETCGVVTVENPLLGVQNSGSTGTLVAGVEAQIVCVDTLKPLPPNQVGELWVRG--P---------------- 399 (488)
Q Consensus 338 i~~~YG~tE~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g--~---------------- 399 (488)
+++.||+||++..+...... .....+++|+|+|++.++|+| +++.+++.|+.|||+++| +
T Consensus 351 i~~~YG~tE~~~~~~~~~~~-~~~~~~~~G~p~~g~~~~i~d-~~~~~~~~g~~Gel~i~~~~~~~~~GY~~~~~~~~~~ 428 (570)
T PRK04319 351 IHDNWWMTETGGIMIANYPA-MDIKPGSMGKPLPGIEAAIVD-DQGNELPPNRMGNLAIKKGWPSMMRGIWNNPEKYESY 428 (570)
T ss_pred eEeceeecccCCEEEecCCC-CCCCCCcCcCCCCCCEEEEEC-CCCCCCCCCCceEEEEcCCCChHHhHhcCCHHHhhhh
Confidence 99999999998765544332 234567899999999999999 578889999999999986 2
Q ss_pred ----CccccceEEEccCCcEEEEcccCcceeeCcEEe---eHhHHHhcCCCeeeeEEEeecCCCCCceEEEEEEeCCCCC
Q 043601 400 ----ILMPGDLGYFDEHGQLFIVDRIKELIKCNGFQV---ELEGVLVSHPEILDAVVIPFPDPEAGEVPIAYVVRSPNSS 472 (488)
Q Consensus 400 ----~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v---~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~ 472 (488)
|+.|||+++++++|++++.||++|+|+.+|++| +||+++.++|.|.+++|++.+++..++.++++|++.++..
T Consensus 429 ~~~gw~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~i~p~eIE~~l~~~~~V~~~~v~g~~~~~~g~~~~a~v~~~~~~~ 508 (570)
T PRK04319 429 FAGDWYVSGDSAYMDEDGYFWFQGRVDDVIKTSGERVGPFEVESKLMEHPAVAEAGVIGKPDPVRGEIIKAFVALRPGYE 508 (570)
T ss_pred hcCCceEeCcEEEECCCeeEEEEecCCCEEEECCEEECHHHHHHHHhhCCCeeecceecccCcCCceEEEEEEEECCCCC
Confidence 788999999999999999999999999999999 9999999999999999999999888999999999987654
Q ss_pred CCH---HHHHHHHHhhcC
Q 043601 473 LTK---EDVQKFVANDSQ 487 (488)
Q Consensus 473 ~~~---~~i~~~~~~~l~ 487 (488)
.+. ++|+++++++|+
T Consensus 509 ~~~~~~~~l~~~~~~~l~ 526 (570)
T PRK04319 509 PSEELKEEIRGFVKKGLG 526 (570)
T ss_pred CCHHHHHHHHHHHHHhcc
Confidence 443 578899988876
No 34
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.4e-58 Score=473.31 Aligned_cols=451 Identities=28% Similarity=0.464 Sum_probs=367.6
Q ss_pred CCHHHHHhhccccCCCceEEEeCCCCcceeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCCcchHHHHHHHHHcCCe
Q 043601 27 LSMVHFLFRNSASYGSKSALIDADSGESLTFSQFKSIVIKVSHGFRH-LGVTKHDVVLIFAPNSIQFPICLLGVIAIGGI 105 (488)
Q Consensus 27 ~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~-~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~ 105 (488)
.|+.++|.++++.+|+++|+++. ++.+||+||+++++++|++|.+ .|+++|++|+++++|++++++++|||+++|++
T Consensus 24 ~~~~~~l~~~a~~~p~~~al~~~--~~~~Ty~el~~~~~~la~~L~~~~gi~~gd~Vai~~~n~~~~~~~~la~~~~Ga~ 101 (562)
T PRK05677 24 PNIQAVLKQSCQRFADKPAFSNL--GKTLTYGELYKLSGAFAAWLQQHTDLKPGDRIAVQLPNVLQYPVAVFGAMRAGLI 101 (562)
T ss_pred CcHHHHHHHHHHhCCCCeeEEEC--CceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCeE
Confidence 58999999999999999999986 6899999999999999999997 59999999999999999999999999999999
Q ss_pred EeecCCCCCHHHHHHHHhhcCCeEEEEccccHHHHhcc----CCCeEEEcccCcccC--C---------------CCcCC
Q 043601 106 ATTANPVYTVSELSKQVKDSSPKLVVTVPELWERVKDF----NIPAVLLGSNHIVSP--R---------------GLRSS 164 (488)
Q Consensus 106 ~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~----~~~~~~~~~~~~~~~--~---------------~~~~~ 164 (488)
++|++|.++.+++.++++.++++++|++.+....+... ..+.+++.......+ . .....
T Consensus 102 ~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (562)
T PRK05677 102 VVNTNPLYTAREMEHQFNDSGAKALVCLANMAHLAEKVLPKTGVKHVIVTEVADMLPPLKRLLINAVVKHVKKMVPAYHL 181 (562)
T ss_pred EeecCCCCCHHHHHHHHhccCceEEEEecchhhhHHHhhhccCcceeEEecccccccchhhhhcccchhhccccccccCC
Confidence 99999999999999999999999999987655433221 222222221100000 0 00000
Q ss_pred CCccchHHHHhhcCCCCCCCCCCCCCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHhhhhhhc--CC-CCcEEEEec
Q 043601 165 SNIVYFDELIELSGNASNFPDVSVKQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTAMDQELA--GA-LDYVTLCVL 241 (488)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~--~~-~~~~~~~~~ 241 (488)
.....+.+.+..... .........++++++|+|||||||.||+|+++|.++...... ....+. .. ..+.+++.+
T Consensus 182 ~~~~~~~~~~~~~~~-~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~ 258 (562)
T PRK05677 182 PQAVKFNDALAKGAG-QPVTEANPQADDVAVLQYTGGTTGVAKGAMLTHRNLVANMLQ--CRALMGSNLNEGCEILIAPL 258 (562)
T ss_pred cccccHHHHHhcCCC-CCCCCCCCCccCEEEEEeCCCCCCCCcEEEEehhHHHHHHHH--HHHHhccCCCCCccEEEEcC
Confidence 112233333322211 111223456789999999999999999999999999776322 222221 22 346889999
Q ss_pred chhhHHhHHHHHHHHhhCCceEEEcC-CCCHHHHHHHHHhcCccEEEecHHHHHHHHhcCCccCCCCCCCccEEEEccCC
Q 043601 242 PMFHVFGLSFVVYAQLQKGNCVVSMR-KFDLETALRAIEKYRVTHWWVVPPIILALAKNVSLVKKFDLSSLKGIGSGAAP 320 (488)
Q Consensus 242 ~~~~~~~~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~v~~~G~~ 320 (488)
|++|.+++...++..+..|.+.++.+ +.++..+++.++++++|.++++|+.+..++.. ......+++++|.+++||++
T Consensus 259 pl~h~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~-~~~~~~~~~~lr~v~~gG~~ 337 (562)
T PRK05677 259 PLYHIYAFTFHCMAMMLIGNHNILISNPRDLPAMVKELGKWKFSGFVGLNTLFVALCNN-EAFRKLDFSALKLTLSGGMA 337 (562)
T ss_pred cHHHHHHHHHHHHHHHHcCCeEEEecCcccHHHHHHHHHHcCceEEecHHHHHHHHHhC-cccccCChhhceEEEEcCcc
Confidence 99999998777778888888776654 57899999999999999999999999999876 33344567899999999999
Q ss_pred CcHHHHHHHHhhCCCCeEEeccCcccccccccccCCCCCCCCCCceeecCCCceEEEEeCCCCCCCCCCCcceEEEecC-
Q 043601 321 LRKELVEECSKNLPTVTVFQGYGMTETCGVVTVENPLLGVQNSGSTGTLVAGVEAQIVCVDTLKPLPPNQVGELWVRGP- 399 (488)
Q Consensus 321 l~~~~~~~~~~~~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~- 399 (488)
+++++.+.|.+.++ +++++.||+||++.++...... ..+.+++|+|++++.++++| +++++++.|+.|||+++|+
T Consensus 338 ~~~~~~~~~~~~~~-~~v~~~YG~tE~~~~~~~~~~~--~~~~~~vG~~~~~~~v~i~d-~~~~~~~~g~~Gel~v~g~~ 413 (562)
T PRK05677 338 LQLATAERWKEVTG-CAICEGYGMTETSPVVSVNPSQ--AIQVGTIGIPVPSTLCKVID-DDGNELPLGEVGELCVKGPQ 413 (562)
T ss_pred CCHHHHHHHHHHcC-CCeeccCCccccCcceeecCcc--CCCCCccCccCCCCEEEEEC-CCCCCCCCCCCeEEEEecCc
Confidence 99999999999886 8999999999998766554332 34567899999999999999 5789999999999999974
Q ss_pred --------------------CccccceEEEccCCcEEEEcccCcceeeCcEEe---eHhHHHhcCCCeeeeEEEeecCCC
Q 043601 400 --------------------ILMPGDLGYFDEHGQLFIVDRIKELIKCNGFQV---ELEGVLVSHPEILDAVVIPFPDPE 456 (488)
Q Consensus 400 --------------------~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v---~ie~~l~~~~~v~~~~v~~~~~~~ 456 (488)
||.|||+|+++++|.+++.||++|+|+.+|.+| +||+++.++++|.+++|++.+++.
T Consensus 414 ~~~gY~~~~~~t~~~~~~~g~~~TGDlg~~~~~G~l~i~GR~~d~i~~~G~~i~p~eiE~~l~~~~~v~~~~v~g~~~~~ 493 (562)
T PRK05677 414 VMKGYWQRPEATDEILDSDGWLKTGDIALIQEDGYMRIVDRKKDMILVSGFNVYPNELEDVLAALPGVLQCAAIGVPDEK 493 (562)
T ss_pred cchhhcCCchhhhhccCCCCcccccceEEECCCCcEEEEecCcCeEEeCCEEECHHHHHHHHHhCCCccEEEEEeccCcc
Confidence 688999999999999999999999999999999 999999999999999999999888
Q ss_pred CCceEEEEEEeCCCCCCCHHHHHHHHHhhcC
Q 043601 457 AGEVPIAYVVRSPNSSLTKEDVQKFVANDSQ 487 (488)
Q Consensus 457 ~~~~~~~~v~~~~~~~~~~~~i~~~~~~~l~ 487 (488)
.++.++++|+.+++...+.++++++++++|+
T Consensus 494 ~g~~~~~~v~~~~~~~~~~~~l~~~~~~~l~ 524 (562)
T PRK05677 494 SGEAIKVFVVVKPGETLTKEQVMEHMRANLT 524 (562)
T ss_pred CCceEEEEEEeCCCCCCCHHHHHHHHHHhhh
Confidence 8899999999887777888999999998875
No 35
>PRK06145 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.2e-58 Score=467.92 Aligned_cols=440 Identities=26% Similarity=0.370 Sum_probs=371.9
Q ss_pred CCHHHHHhhccccCCCceEEEeCCCCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHHcCCeE
Q 043601 27 LSMVHFLFRNSASYGSKSALIDADSGESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQFPICLLGVIAIGGIA 106 (488)
Q Consensus 27 ~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~ 106 (488)
+++.+.|.++++++|+++|+.+. ++.+||.||+++++++|.+|.+.|++++++|+++++|++++++++|||+++|+++
T Consensus 2 ~~~~~~~~~~~~~~~~~~a~~~~--~~~~ty~el~~~v~~~a~~L~~~g~~~~~~v~i~~~~~~~~~~~~la~~~~G~~~ 79 (497)
T PRK06145 2 FNLSASIAFHARRTPDRAALVYR--DQEISYAEFHQRILQAAGMLHARGIGQGDVVALLMKNSAAFLELAFAASYLGAVF 79 (497)
T ss_pred ccHHHHHHHHHHHCCCceEEEEC--CcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhcCcEE
Confidence 57889999999999999999987 7899999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCHHHHHHHHhhcCCeEEEEccccHHHHhccCCCeEEEcccCcccCCCCcCCCCccchHHHHhhcCCCCCCCCC
Q 043601 107 TTANPVYTVSELSKQVKDSSPKLVVTVPELWERVKDFNIPAVLLGSNHIVSPRGLRSSSNIVYFDELIELSGNASNFPDV 186 (488)
Q Consensus 107 v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (488)
+|+++.++.+.+..+++.++++.++++++....... ....+.+.... . ..+..+..... ......
T Consensus 80 v~l~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~---------~---~~~~~~~~~~~--~~~~~~ 144 (497)
T PRK06145 80 LPINYRLAADEVAYILGDAGAKLLLVDEEFDAIVAL-ETPKIVIDAAA---------Q---ADSRRLAQGGL--EIPPQA 144 (497)
T ss_pred EecccccCHHHHHHHHHhcCCcEEEEccchhhhhhc-ccceEEecCcc---------c---chhHHHhccCC--CCCCCC
Confidence 999999999999999999999999998776543321 11111111100 0 00111111000 111122
Q ss_pred CCCCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHhhhhhhcCCCCcEEEEecchhhHHhHHHHHHHHhhCCceEEEc
Q 043601 187 SVKQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTAMDQELAGALDYVTLCVLPMFHVFGLSFVVYAQLQKGNCVVSM 266 (488)
Q Consensus 187 ~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~ 266 (488)
...++++++++|||||||.||+|++||.++...+. .....+....+++++...|++|.+++....+.++..|+++++.
T Consensus 145 ~~~~~~~a~i~~TSGTTG~PK~v~~s~~~~~~~~~--~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~g~~~~~~ 222 (497)
T PRK06145 145 AVAPTDLVRLMYTSGTTDRPKGVMHSYGNLHWKSI--DHVIALGLTASERLLVVGPLYHVGAFDLPGIAVLWVGGTLRIH 222 (497)
T ss_pred CCCccceEEEEeCCCCCCCCcEEEEecHHHHHHHH--HHHHhhCCCCCcEEEEecCchhHhHHHHHHHHHHhccCEEEEC
Confidence 35678999999999999999999999999876532 2334456788899999999999999876677889999999999
Q ss_pred CCCCHHHHHHHHHhcCccEEEecHHHHHHHHhcCCccCCCCCCCccEEEEccCCCcHHHHHHHHhhCCCCeEEeccCccc
Q 043601 267 RKFDLETALRAIEKYRVTHWWVVPPIILALAKNVSLVKKFDLSSLKGIGSGAAPLRKELVEECSKNLPTVTVFQGYGMTE 346 (488)
Q Consensus 267 ~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~i~~~YG~tE 346 (488)
+.+++..+++.++++++|.+.++|+++..++.. ......+++++|.+++||+++++.+++.+.+.|++..+++.||+||
T Consensus 223 ~~~~~~~~~~~i~~~~~t~~~~~P~~~~~ll~~-~~~~~~~~~~l~~~~~gG~~~~~~~~~~~~~~~~~~~v~~~YG~tE 301 (497)
T PRK06145 223 REFDPEAVLAAIERHRLTCAWMAPVMLSRVLTV-PDRDRFDLDSLAWCIGGGEKTPESRIRDFTRVFTRARYIDAYGLTE 301 (497)
T ss_pred CcCCHHHHHHHHHHhCCeEEEehHHHHHHHHcC-CCccccccccceEEEecCCCCCHHHHHHHHHHcCCCceEEeecCcc
Confidence 889999999999999999999999999999886 4444567789999999999999999999999998789999999999
Q ss_pred ccccccccCCCCCCCCCCceeecCCCceEEEEeCCCCCCCCCCCcceEEEecC--------------------Cccccce
Q 043601 347 TCGVVTVENPLLGVQNSGSTGTLVAGVEAQIVCVDTLKPLPPNQVGELWVRGP--------------------ILMPGDL 406 (488)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~--------------------~~~tGD~ 406 (488)
++...+...........+++|+|++++.++++| ++++.++.|+.|||+++|+ ||+|||+
T Consensus 302 ~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~-~~~~~~~~~~~Gel~v~g~~~~~Gy~~~~~~~~~~~~~~~~~TGDl 380 (497)
T PRK06145 302 TCSGDTLMEAGREIEKIGSTGRALAHVEIRIAD-GAGRWLPPNMKGEICMRGPKVTKGYWKDPEKTAEAFYGDWFRSGDV 380 (497)
T ss_pred cCCcceeccCccccccCCCcccCCCCceEEEEC-CCCCCCCCCCceEEEEECcchhhhhcCChHHHHHHHhCCCeeccce
Confidence 987655433222234567899999999999999 5788999999999999984 7899999
Q ss_pred EEEccCCcEEEEcccCcceeeCcEEe---eHhHHHhcCCCeeeeEEEeecCCCCCceEEEEEEeCCCCCCCHHHHHHHHH
Q 043601 407 GYFDEHGQLFIVDRIKELIKCNGFQV---ELEGVLVSHPEILDAVVIPFPDPEAGEVPIAYVVRSPNSSLTKEDVQKFVA 483 (488)
Q Consensus 407 ~~~~~~g~l~~~GR~~d~i~~~G~~v---~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~~~~ 483 (488)
++++++|++++.||++|+||.+|.++ +||.++.++++|.+++|++.+++..++.++++++++++...+.++++++++
T Consensus 381 ~~~~~~g~l~~~GR~~~~i~~~G~~v~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~ 460 (497)
T PRK06145 381 GYLDEEGFLYLTDRKKDMIISGGENIASSEVERVIYELPEVAEAAVIGVHDDRWGERITAVVVLNPGATLTLEALDRHCR 460 (497)
T ss_pred EEEcCCCcEEEeccccceEEeCCeEECHHHHHHHHHhCCCeeEEEEEecCCCccCceEEEEEEECCCCCCCHHHHHHHHH
Confidence 99999999999999999999999999 999999999999999999999888888999999998777778899999999
Q ss_pred hhcC
Q 043601 484 NDSQ 487 (488)
Q Consensus 484 ~~l~ 487 (488)
++|+
T Consensus 461 ~~l~ 464 (497)
T PRK06145 461 QRLA 464 (497)
T ss_pred Hhhh
Confidence 9875
No 36
>PRK09274 peptide synthase; Provisional
Probab=100.00 E-value=3.9e-59 Score=477.15 Aligned_cols=440 Identities=22% Similarity=0.373 Sum_probs=351.0
Q ss_pred CCCHHHHHhhccccCCCceEEEeCCCC--------cceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHH
Q 043601 26 NLSMVHFLFRNSASYGSKSALIDADSG--------ESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQFPICLL 97 (488)
Q Consensus 26 ~~~l~~~l~~~a~~~p~~~a~~~~~~~--------~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~l 97 (488)
.+|+.++|.+.++++|+++|+++.+.+ +++||+||.++++++|++|.+.|+++||+|+++++|++++++++|
T Consensus 5 ~~~~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~~Ty~~l~~~~~~~A~~L~~~g~~~gd~V~~~~~n~~~~~~~~l 84 (552)
T PRK09274 5 MANIARHLPRAAQERPDQLAVAVPGGRGADGKLAYDELSFAELDARSDAIAHGLNAAGIGRGMRAVLMVTPSLEFFALTF 84 (552)
T ss_pred hhhHHHHHHHHHHhCCCcceEEeccCCCCccccccCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCcHHHHHHHH
Confidence 368899999999999999999875322 289999999999999999999999999999999999999999999
Q ss_pred HHHHcCCeEeecCCCCCHHHHHHHHhhcCCeEEEEccc--cHHHHhccC---CCeEEEcccCcccCCCCcCCCCccchHH
Q 043601 98 GVIAIGGIATTANPVYTVSELSKQVKDSSPKLVVTVPE--LWERVKDFN---IPAVLLGSNHIVSPRGLRSSSNIVYFDE 172 (488)
Q Consensus 98 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~--~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (488)
||+++|++++|++|.++.+++.++++.++++++|++++ ....+.... ...++.... ........+++
T Consensus 85 a~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~--------~~~~~~~~~~~ 156 (552)
T PRK09274 85 ALFKAGAVPVLVDPGMGIKNLKQCLAEAQPDAFIGIPKAHLARRLFGWGKPSVRRLVTVGG--------RLLWGGTTLAT 156 (552)
T ss_pred HHHHcCeEEEEcCCCccHHHHHHHHHhcCCCEEEeccHHHHHHHHhccCccchhheecccc--------ccccCCccHHH
Confidence 99999999999999999999999999999999999752 222222111 111111000 00111123444
Q ss_pred HHhhcCCCCCCCCCCCCCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHhhhhhhcCCCCcEEEEecchhhHHhHHHH
Q 043601 173 LIELSGNASNFPDVSVKQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTAMDQELAGALDYVTLCVLPMFHVFGLSFV 252 (488)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (488)
+...... .........++++++|+|||||||.||+|++||.++... .......+...++++.++..|++|.+++
T Consensus 157 ~~~~~~~-~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~--~~~~~~~~~~~~~~~~~~~~pl~~~~~~--- 230 (552)
T PRK09274 157 LLRDGAA-APFPMADLAPDDMAAILFTSGSTGTPKGVVYTHGMFEAQ--IEALREDYGIEPGEIDLPTFPLFALFGP--- 230 (552)
T ss_pred hcccCcc-ccCCCCCCCCCCeEEEEECCCCCCCCceEEecHHHHHHH--HHHHHHHhCCCCCceeeeccCHHHhhhh---
Confidence 3311111 122233456789999999999999999999999999877 3334455667888999999999876553
Q ss_pred HHHHhhCCceEEEcC-------CCCHHHHHHHHHhcCccEEEecHHHHHHHHhcCCccCCCCCCCccEEEEccCCCcHHH
Q 043601 253 VYAQLQKGNCVVSMR-------KFDLETALRAIEKYRVTHWWVVPPIILALAKNVSLVKKFDLSSLKGIGSGAAPLRKEL 325 (488)
Q Consensus 253 ~~~~l~~G~~~~~~~-------~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~v~~~G~~l~~~~ 325 (488)
..|+++++.+ .+++..+++.|+++++|+++++|+++..+.+. ......++++||.+++||+++++++
T Consensus 231 -----~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~-~~~~~~~~~~lr~~~~gG~~~~~~~ 304 (552)
T PRK09274 231 -----ALGMTSVIPDMDPTRPATVDPAKLFAAIERYGVTNLFGSPALLERLGRY-GEANGIKLPSLRRVISAGAPVPIAV 304 (552)
T ss_pred -----hhCCeEEecCcccccccccCHHHHHHHHHHcCCeEEeccHHHHHHHHHH-hhhcCCCCchhhEEEecCCcCCHHH
Confidence 3477777653 35789999999999999999999999999986 4444568899999999999999999
Q ss_pred HHHHHhhCC-CCeEEeccCcccccccccccCCC------C--CCCCCCceeecCCCceEEEEeCC--------CCCCCCC
Q 043601 326 VEECSKNLP-TVTVFQGYGMTETCGVVTVENPL------L--GVQNSGSTGTLVAGVEAQIVCVD--------TLKPLPP 388 (488)
Q Consensus 326 ~~~~~~~~~-~~~i~~~YG~tE~~~~~~~~~~~------~--~~~~~~~~g~~~~~~~~~i~d~~--------~~~~~~~ 388 (488)
.+++.+.|+ ++++++.||+||++++++..... . ......++|+|++++.++|+|++ ++++++.
T Consensus 305 ~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~ivd~~~~~~~~~~~~~~~~~ 384 (552)
T PRK09274 305 IERFRAMLPPDAEILTPYGATEALPISSIESREILFATRAATDNGAGICVGRPVDGVEVRIIAISDAPIPEWDDALRLAT 384 (552)
T ss_pred HHHHHHHcCCCceEEccccccccceeEeecchhhhccccccccCCCCcccCccCCCceEEEEeccccccccccccccCCC
Confidence 999999997 37999999999998765533211 0 01123378999999999999853 4678999
Q ss_pred CCcceEEEecC-------------------------CccccceEEEccCCcEEEEcccCcceeeCcEEe---eHhHHHhc
Q 043601 389 NQVGELWVRGP-------------------------ILMPGDLGYFDEHGQLFIVDRIKELIKCNGFQV---ELEGVLVS 440 (488)
Q Consensus 389 g~~Gel~v~g~-------------------------~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v---~ie~~l~~ 440 (488)
|+.|||+++|+ |++|||+|++++||++++.||.+|+||++|.+| +||.++.+
T Consensus 385 g~~Gel~v~g~~~~~GY~~~~~~t~~~~~~~~~g~~w~~TGDlg~~d~dG~l~~~GR~~d~i~~~G~~v~p~eIE~~l~~ 464 (552)
T PRK09274 385 GEIGEIVVAGPMVTRSYYNRPEATRLAKIPDGQGDVWHRMGDLGYLDAQGRLWFCGRKAHRVETAGGTLYTIPCERIFNT 464 (552)
T ss_pred CCeeEEEEecCcccccccCChHHhhhhhcccCCCCcEEEcCCEEEEccCCcEEEEeccCCeEEECCEEECcHHHHHHHHh
Confidence 99999999763 788999999999999999999999999999999 99999999
Q ss_pred CCCeeeeEEEeecCCCCCceEEEEEEeCCCCCCCHHHHHHHHHhhc
Q 043601 441 HPEILDAVVIPFPDPEAGEVPIAYVVRSPNSSLTKEDVQKFVANDS 486 (488)
Q Consensus 441 ~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~~~~~~l 486 (488)
||+|.+++|++.+++ +++.++++|++.++...+.+++++.+++.+
T Consensus 465 ~p~V~~~~v~~~~~~-~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l 509 (552)
T PRK09274 465 HPGVKRSALVGVGVP-GAQRPVLCVELEPGVACSKSALYQELRALA 509 (552)
T ss_pred CcccceeEEEEeCCC-CCceEEEEEEccCccccchHHHhhhhHHHH
Confidence 999999999999875 467889999988877666666776666554
No 37
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.3e-58 Score=469.19 Aligned_cols=450 Identities=34% Similarity=0.496 Sum_probs=383.0
Q ss_pred CCCCCHHHHHhhccccCCCceEEEeCCCCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHHcC
Q 043601 24 DPNLSMVHFLFRNSASYGSKSALIDADSGESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQFPICLLGVIAIG 103 (488)
Q Consensus 24 ~~~~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G 103 (488)
..+.++.++|.++++.+|+++|+.+. ++.+||+||+++++++|+.|.+.|+++|++|+++++|++++++++|||+++|
T Consensus 3 ~~~~~l~~~l~~~~~~~p~~~a~~~~--~~~~Ty~~l~~~~~~~a~~L~~~g~~~~~~V~l~~~~~~~~~~~~la~~~~G 80 (521)
T PRK06187 3 DYPLTIGRILRHGARKHPDKEAVYFD--GRRTTYAELDERVNRLANALRALGVKKGDRVAVFDWNSHEYLEAYFAVPKIG 80 (521)
T ss_pred cccCCHHHHHHHHHHHCCCceEEEeC--CceEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcC
Confidence 34589999999999999999999987 6679999999999999999999999999999999999999999999999999
Q ss_pred CeEeecCCCCCHHHHHHHHhhcCCeEEEEccccHHHHhccC-----CCeEEEcccCcccCCCCcCCCCccchHHHHhhcC
Q 043601 104 GIATTANPVYTVSELSKQVKDSSPKLVVTVPELWERVKDFN-----IPAVLLGSNHIVSPRGLRSSSNIVYFDELIELSG 178 (488)
Q Consensus 104 ~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (488)
++++|+++.++.+.+..+++.+++++++++.+....+.... ...+++..+.... ........+.+++....
T Consensus 81 ~~~v~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~ 156 (521)
T PRK06187 81 AVLHPINIRLKPEEIAYILNDAEDRVVLVDSEFVPLLAAILPQLPTVRTVIVEGDGPAA----PLAPEVGEYEELLAAAS 156 (521)
T ss_pred eEEEecccCCCHHHHHHHHHhcCCeEEEEcchHHHHHHHHhhccCCccEEEEecCcccc----ccccccccHHHHhhcCC
Confidence 99999999999999999999999999999988766654432 1222222221100 11233445555554333
Q ss_pred CCCCCCCCCCCCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHhhhhhhcCCCCcEEEEecchhhHHhHHHHHHHHhh
Q 043601 179 NASNFPDVSVKQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTAMDQELAGALDYVTLCVLPMFHVFGLSFVVYAQLQ 258 (488)
Q Consensus 179 ~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 258 (488)
..........+++++++|||||||.||+|.+||.++..... .....+...+++++++.+|++|..++. ..+.++.
T Consensus 157 --~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~t~~~l~~~~~--~~~~~~~~~~~d~~~~~~~~~~~~~~~-~~~~~l~ 231 (521)
T PRK06187 157 --DTFDFPDIDENDAAAMLYTSGTTGHPKGVVLSHRNLFLHSL--AVCAWLKLSRDDVYLVIVPMFHVHAWG-LPYLALM 231 (521)
T ss_pred --ccCCCCCCCccceEEEEECCCCCCCCceEEeehHHHHHHHH--HHHHhhCCCCCCEEEEeCCchHHhhHH-HHHHHHH
Confidence 22334456678999999999999999999999999887633 344566778899999999999999884 4445999
Q ss_pred CCceEEEcCCCCHHHHHHHHHhcCccEEEecHHHHHHHHhcCCccCCCCCCCccEEEEccCCCcHHHHHHHHhhCCCCeE
Q 043601 259 KGNCVVSMRKFDLETALRAIEKYRVTHWWVVPPIILALAKNVSLVKKFDLSSLKGIGSGAAPLRKELVEECSKNLPTVTV 338 (488)
Q Consensus 259 ~G~~~~~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~i 338 (488)
.|+++++++..++..+++.++++++|.++++|+++..+.+. ......+++++|.+++|||++++++.+.|.+.|+ +++
T Consensus 232 ~G~~~v~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~-~~~~~~~~~~l~~v~~~Ge~l~~~~~~~~~~~~~-~~v 309 (521)
T PRK06187 232 AGAKQVIPRRFDPENLLDLIETERVTFFFAVPTIWQMLLKA-PRAYFVDFSSLRLVIYGGAALPPALLREFKEKFG-IDL 309 (521)
T ss_pred hCCEEEecCCCCHHHHHHHHHHhCCeEEEchHHHHHHHHcC-cCCCccCcchhhEEEEcCcCCCHHHHHHHHHHhC-cch
Confidence 99999999888999999999999999999999999999987 4444567899999999999999999999999994 999
Q ss_pred EeccCcccccccccccCCCCC----CCCCCceeecCCCceEEEEeCCCCCCCCC--CCcceEEEecC-------------
Q 043601 339 FQGYGMTETCGVVTVENPLLG----VQNSGSTGTLVAGVEAQIVCVDTLKPLPP--NQVGELWVRGP------------- 399 (488)
Q Consensus 339 ~~~YG~tE~~~~~~~~~~~~~----~~~~~~~g~~~~~~~~~i~d~~~~~~~~~--g~~Gel~v~g~------------- 399 (488)
++.||+||++.++........ .....++|+|++++.++|+| +++++++. |+.|||+++|+
T Consensus 310 ~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~-~~~~~~~~~~g~~Gel~v~~~~~~~~y~~~~~~~ 388 (521)
T PRK06187 310 VQGYGMTETSPVVSVLPPEDQLPGQWTKRRSAGRPLPGVEARIVD-DDGDELPPDGGEVGEIIVRGPWLMQGYWNRPEAT 388 (521)
T ss_pred heeeccCccCcccccCCcccccccccccCCccccccCCeEEEEEC-CCCCCCCCCCCCeeEEEEECcchhhhhcCCHHHH
Confidence 999999999876665543321 12667899999999999999 57888888 99999999986
Q ss_pred -------CccccceEEEccCCcEEEEcccCcceeeCcEEe---eHhHHHhcCCCeeeeEEEeecCCCCCceEEEEEEeCC
Q 043601 400 -------ILMPGDLGYFDEHGQLFIVDRIKELIKCNGFQV---ELEGVLVSHPEILDAVVIPFPDPEAGEVPIAYVVRSP 469 (488)
Q Consensus 400 -------~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v---~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~ 469 (488)
||+|||+++++++|.+++.||.+|+++++|.++ +||+++.++++|.+++|++.+++..++.+++++++++
T Consensus 389 ~~~~~~~~~~tGD~~~~~~~g~~~~~GR~~~~i~~~G~~v~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~ 468 (521)
T PRK06187 389 AETIDGGWLHTGDVGYIDEDGYLYITDRIKDVIISGGENIYPRELEDALYGHPAVAEVAVIGVPDEKWGERPVAVVVLKP 468 (521)
T ss_pred HHHhhCCceeccceEEEcCCCCEEEeecccceEEcCCeEECHHHHHHHHHhCCCceEEEEEeccCCCcCceEEEEEEECC
Confidence 489999999999999999999999999999999 9999999999999999999988888899999999988
Q ss_pred CCCCCHHHHHHHHHhhcC
Q 043601 470 NSSLTKEDVQKFVANDSQ 487 (488)
Q Consensus 470 ~~~~~~~~i~~~~~~~l~ 487 (488)
+...+.++++++++++|+
T Consensus 469 ~~~~~~~~l~~~l~~~l~ 486 (521)
T PRK06187 469 GATLDAKELRAFLRGRLA 486 (521)
T ss_pred CCCCCHHHHHHHHHHhcc
Confidence 877889999999998875
No 38
>COG1021 EntE Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.7e-60 Score=423.54 Aligned_cols=445 Identities=26% Similarity=0.333 Sum_probs=378.8
Q ss_pred CCCCCCCCCCHHHHHhhccccCCCceEEEeCCCCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHH
Q 043601 19 LVLPQDPNLSMVHFLFRNSASYGSKSALIDADSGESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQFPICLLG 98 (488)
Q Consensus 19 ~~~~~~~~~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA 98 (488)
..++++ .|+.+.|.++|.++|+++|++++ ++.+||+||+++++++|..|+++|+++||+|.+..||..+|++++||
T Consensus 22 ~GyW~d--~~l~d~L~~~A~~~pdriAv~d~--~~~~sY~eLdqr~d~LAa~l~~lGi~~Gd~vlvQLpN~~ef~~~~FA 97 (542)
T COG1021 22 KGYWQD--RTLTDILTDHAARYPDRIAVIDG--ERRLSYAELDQRADRLAAGLRRLGIKPGDTVLVQLPNVAEFYITFFA 97 (542)
T ss_pred cCcccC--CcHHHHHHHHHhhcCCceEEecC--cccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCchHHHHHHHHH
Confidence 346777 89999999999999999999998 78899999999999999999999999999999999999999999999
Q ss_pred HHHcCCeEeecCCCCCHHHHHHHHhhcCCeEEEEcccc--------HHHHhcc--CCCeEEEcccCcccCCCCcCCCCcc
Q 043601 99 VIAIGGIATTANPVYTVSELSKQVKDSSPKLVVTVPEL--------WERVKDF--NIPAVLLGSNHIVSPRGLRSSSNIV 168 (488)
Q Consensus 99 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~--------~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (488)
++++|..+|.--|.....+|..+.+.+.++..|.+... ...+... .++.+++..+..- ...
T Consensus 98 LlrlGv~PVlALpsHr~~Ei~~f~~~~e~~~~i~~~~~~gFd~~~~ar~~~a~~~tlr~v~v~ge~~~---------~~~ 168 (542)
T COG1021 98 LLRLGVAPVLALPSHRASELGAFASQIEAALLIVARQHSGFDYRPFARELVAKHPTLRHVIVAGEAEH---------PSV 168 (542)
T ss_pred HHHcCcchhhccchhhHHHHHHHHHhhcchheeechhhcccCcHHHHHHHHhhCCcceEEEEccCCCC---------cch
Confidence 99999999998899999999999999999999987532 1112111 2345555533110 011
Q ss_pred chHHHHhhcCCCCCCCCCCCCCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHhhhhhhcCCCCcEEEEecchhhHHh
Q 043601 169 YFDELIELSGNASNFPDVSVKQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTAMDQELAGALDYVTLCVLPMFHVFG 248 (488)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (488)
.+..+..... ...+..+.+++++++...+.||||.||.|..||.....+ +........+....++++.+|..|-+.
T Consensus 169 ~~~~~~~~a~--~~~~a~~~~~~~vA~fqLSGGTTGtPKLIPRtH~DY~Ys--v~aSaEiC~~~~~tvyL~~LP~AHNfp 244 (542)
T COG1021 169 LEAALCHPAG--LFTPAPPADAGEVAFFQLSGGTTGTPKLIPRTHNDYYYS--VRASAEICGFDQQTVYLCALPAAHNFP 244 (542)
T ss_pred hhhhhhCccc--cCCcCCCCCCCceEEEEecCCCCCCCccccccccceeee--eeehhhhhCcCccceEEEecccccCCC
Confidence 1222222112 233345678889999999999999999999999998877 555667777899999999999999766
Q ss_pred HH-HHHHHHhhCCceEEEcCCCCHHHHHHHHHhcCccEEEecHHHHHHHHhcCCccCCCCCCCccEEEEccCCCcHHHHH
Q 043601 249 LS-FVVYAQLQKGNCVVSMRKFDLETALRAIEKYRVTHWWVVPPIILALAKNVSLVKKFDLSSLKGIGSGAAPLRKELVE 327 (488)
Q Consensus 249 ~~-~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~ 327 (488)
+. -+.+..++.|+++|+.+..+++..+.+|+++++|+...+|.....|++. .+....+++|||.+-.||..+++++.+
T Consensus 245 lssPG~LGv~~agG~VVla~~psp~~~F~lIerh~Vt~tALVPpla~LWlqa-~e~~~~~LsSLrllQVGGarl~~~~Ar 323 (542)
T COG1021 245 LSSPGALGVFLAGGTVVLAPDPSPELCFPLIERHGVTVTALVPPLASLWLQA-AEWERADLSSLRLLQVGGARLSATLAR 323 (542)
T ss_pred CCCcchhheeeeccEEEECCCCCHHHHHHHHHHhccceEEeccHHHHHHHHh-hhcccCCchheeEEeecCcccCHHHHh
Confidence 64 4688999999999999999999999999999999999999999999998 666788999999999999999999999
Q ss_pred HHHhhCCCCeEEeccCcccccccccccCCCCCCCCCCceeecC-CCceEEEEeCCCCCCCCCCCcceEEEecC-------
Q 043601 328 ECSKNLPTVTVFQGYGMTETCGVVTVENPLLGVQNSGSTGTLV-AGVEAQIVCVDTLKPLPPNQVGELWVRGP------- 399 (488)
Q Consensus 328 ~~~~~~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~i~d~~~~~~~~~g~~Gel~v~g~------- 399 (488)
++...++ |.+-+.|||.|.- +.+..-.+....-..+-|+|+ |.-+++|+| ++|+++++||+|+|..+||
T Consensus 324 rv~~~lg-C~LQQVFGMAEGL-vnyTRLDDp~E~i~~TQGrPlsP~DEvrvvD-~dg~pv~pGE~G~LltRGPYTirGYy 400 (542)
T COG1021 324 RVPAVLG-CQLQQVFGMAEGL-VNYTRLDDPPEIIIHTQGRPLSPDDEVRVVD-ADGNPVAPGEVGELLTRGPYTIRGYY 400 (542)
T ss_pred hchhhhC-chHHHHhhhhhhh-hcccccCCchHheeecCCCcCCCcceeEEec-CCCCCCCCCCcceeeecCCeeeeeec
Confidence 9999997 9999999999942 333222222234455779998 678999999 7999999999999999998
Q ss_pred --------------CccccceEEEccCCcEEEEcccCcceeeCcEEe---eHhHHHhcCCCeeeeEEEeecCCCCCceEE
Q 043601 400 --------------ILMPGDLGYFDEHGQLFIVDRIKELIKCNGFQV---ELEGVLVSHPEILDAVVIPFPDPEAGEVPI 462 (488)
Q Consensus 400 --------------~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v---~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~ 462 (488)
.|+|||++++++||++.+.||.||+|+.+|++| |||+.|..||.|.+++++..+++-.||+.|
T Consensus 401 rap~HNa~aF~a~GFYrsGD~V~~~~dGyl~V~GR~KDQINRgGEKIAAeEvEn~LL~HP~V~~AAlVampDelLGEksC 480 (542)
T COG1021 401 RAPEHNARAFDADGFYRSGDLVRRDPDGYLVVEGRVKDQINRGGEKIAAEEVENLLLRHPAVHDAALVAMPDELLGEKSC 480 (542)
T ss_pred cCchhhhhccCcCCceecCceeEecCCceEEEEeeehhhhccccchhhHHHHHHHHhhCchhhhhhhhcCchhhcCccee
Confidence 477899999999999999999999999999999 999999999999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHhh
Q 043601 463 AYVVRSPNSSLTKEDVQKFVAND 485 (488)
Q Consensus 463 ~~v~~~~~~~~~~~~i~~~~~~~ 485 (488)
|+|+.++- .++..++++++++.
T Consensus 481 Afiv~~~~-~~~~~qlr~~L~~~ 502 (542)
T COG1021 481 AFIVVKEP-PLRAAQLRRFLRER 502 (542)
T ss_pred EEEEecCC-CCCHHHHHHHHHHc
Confidence 99999865 38899999999864
No 39
>PRK08315 AMP-binding domain protein; Validated
Probab=100.00 E-value=2.4e-58 Score=472.42 Aligned_cols=453 Identities=29% Similarity=0.428 Sum_probs=377.2
Q ss_pred CCCCCHHHHHhhccccCCCceEEEeCCCCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHHcC
Q 043601 24 DPNLSMVHFLFRNSASYGSKSALIDADSGESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQFPICLLGVIAIG 103 (488)
Q Consensus 24 ~~~~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G 103 (488)
.++.++.++|.+.++.+|+++|+++.+.++.+||+||.++++++|+.|.+.|+++|++|+++++|++++++++|||+++|
T Consensus 13 ~~~~~l~~~l~~~~~~~~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~~~~~la~~~~G 92 (559)
T PRK08315 13 LLEQTIGQLLDRTAARYPDREALVYRDQGLRWTYREFNEEVDALAKGLLALGIEKGDRVGIWAPNVPEWVLTQFATAKIG 92 (559)
T ss_pred hhhccHHHHHHHHHHHCCCCeEEEEcCCCeEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHHhC
Confidence 44578999999999999999999987667899999999999999999999999999999999999999999999999999
Q ss_pred CeEeecCCCCCHHHHHHHHhhcCCeEEEEccccHH-----HHhccCC------------------CeEEEcccCcccCCC
Q 043601 104 GIATTANPVYTVSELSKQVKDSSPKLVVTVPELWE-----RVKDFNI------------------PAVLLGSNHIVSPRG 160 (488)
Q Consensus 104 ~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~-----~~~~~~~------------------~~~~~~~~~~~~~~~ 160 (488)
++++|++|..+.+++..+++.++++.+|++.+... .+..... ..+.....
T Consensus 93 ~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 165 (559)
T PRK08315 93 AILVTINPAYRLSELEYALNQSGCKALIAADGFKDSDYVAMLYELAPELATCEPGQLQSARLPELRRVIFLGD------- 165 (559)
T ss_pred eEEEecCccCCHHHHHHHHHhcCCCEEEEeccccccchHHHHHHhhhhhhcccccccccccCCCceeEEeecc-------
Confidence 99999999999999999999999999999875321 1111000 00110000
Q ss_pred CcCCCCccchHHHHhhcCCCC----CCCCCCCCCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHhhhhhhcCCCCcE
Q 043601 161 LRSSSNIVYFDELIELSGNAS----NFPDVSVKQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTAMDQELAGALDYV 236 (488)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~ 236 (488)
....+...++++........ .........+++++++|||||||.||+|.+||.++..++. .....+...++++
T Consensus 166 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~--~~~~~~~~~~~d~ 242 (559)
T PRK08315 166 -EKHPGMLNFDELLALGRAVDDAELAARQATLDPDDPINIQYTSGTTGFPKGATLTHRNILNNGY--FIGEAMKLTEEDR 242 (559)
T ss_pred -cCCcccccHHHHHhhccccccccccchhccCCCCCcEEEEEcCCCCCCcceEEeeHHHHHHHHH--HHHHhcCCCCCce
Confidence 01122334444433221000 1112235678899999999999999999999999987733 3455566788999
Q ss_pred EEEecchhhHHhHHHHHHHHhhCCceEEE-cCCCCHHHHHHHHHhcCccEEEecHHHHHHHHhcCCccCCCCCCCccEEE
Q 043601 237 TLCVLPMFHVFGLSFVVYAQLQKGNCVVS-MRKFDLETALRAIEKYRVTHWWVVPPIILALAKNVSLVKKFDLSSLKGIG 315 (488)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~l~~G~~~~~-~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~v~ 315 (488)
++..+|++|..++...++.++..|+++++ ...+++..+++.++++++|+++++|+.+..++.. ......++++||.++
T Consensus 243 ~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~~~~~-~~~~~~~~~~lr~~~ 321 (559)
T PRK08315 243 LCIPVPLYHCFGMVLGNLACVTHGATMVYPGEGFDPLATLAAVEEERCTALYGVPTMFIAELDH-PDFARFDLSSLRTGI 321 (559)
T ss_pred EEEecCcHHHHHHHHHHHHHHhccceEEEecCCCCHHHHHHHHHHcCCeEEecchHHHHHHHhC-cccCCCCchhhheeE
Confidence 99999999999988888999999999984 4568999999999999999999999999888876 444456789999999
Q ss_pred EccCCCcHHHHHHHHhhCCCCeEEeccCcccccccccccCCCC-CCCCCCceeecCCCceEEEEeCCCCCCCCCCCcceE
Q 043601 316 SGAAPLRKELVEECSKNLPTVTVFQGYGMTETCGVVTVENPLL-GVQNSGSTGTLVAGVEAQIVCVDTLKPLPPNQVGEL 394 (488)
Q Consensus 316 ~~G~~l~~~~~~~~~~~~~~~~i~~~YG~tE~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~i~d~~~~~~~~~g~~Gel 394 (488)
+||+++++++.+.+.+.++..++++.||+||++.+++...... ...+..++|+|++++.++++|++++++++.|+.|||
T Consensus 322 ~~G~~~~~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~vG~p~~~~~v~i~d~~~~~~~~~g~~GEl 401 (559)
T PRK08315 322 MAGSPCPIEVMKRVIDKMHMSEVTIAYGMTETSPVSTQTRTDDPLEKRVTTVGRALPHLEVKIVDPETGETVPRGEQGEL 401 (559)
T ss_pred ecCCCCCHHHHHHHHHHcCCcceeEEEcccccccceeecCcccchhhccCCCCccCCCcEEEEEcCccCCcCCCCCceEE
Confidence 9999999999999999998566999999999987665443221 123567899999999999999776999999999999
Q ss_pred EEecC---------------------CccccceEEEccCCcEEEEcccCcceeeCcEEe---eHhHHHhcCCCeeeeEEE
Q 043601 395 WVRGP---------------------ILMPGDLGYFDEHGQLFIVDRIKELIKCNGFQV---ELEGVLVSHPEILDAVVI 450 (488)
Q Consensus 395 ~v~g~---------------------~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v---~ie~~l~~~~~v~~~~v~ 450 (488)
+|+|+ ||+|||+|++++||.++++||.+|+++.+|.+| +||+++.++++|.+++|+
T Consensus 402 ~v~g~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~~~~~GR~d~~i~~~G~~v~~~eIE~~l~~~~~v~~~~v~ 481 (559)
T PRK08315 402 CTRGYSVMKGYWNDPEKTAEAIDADGWMHTGDLAVMDEEGYVNIVGRIKDMIIRGGENIYPREIEEFLYTHPKIQDVQVV 481 (559)
T ss_pred EEECchhhhhhcCChhHHhhcCCCCCCEEccceEEEcCCceEEEEeeccceEEECCEEEcHHHHHHHHHhCCCceEEEEE
Confidence 99875 688999999999999999999999999999999 999999999999999999
Q ss_pred eecCCCCCceEEEEEEeCCCCCCCHHHHHHHHHhhcC
Q 043601 451 PFPDPEAGEVPIAYVVRSPNSSLTKEDVQKFVANDSQ 487 (488)
Q Consensus 451 ~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~~~~~~l~ 487 (488)
+.+++..++.++++|+..++...+.++++++++++|+
T Consensus 482 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~ 518 (559)
T PRK08315 482 GVPDEKYGEEVCAWIILRPGATLTEEDVRDFCRGKIA 518 (559)
T ss_pred ecCCCCCCeEEEEEEEeCCCCCCCHHHHHHHHHhhcc
Confidence 9988877888999999887777788999999998875
No 40
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=5.4e-58 Score=467.21 Aligned_cols=444 Identities=27% Similarity=0.405 Sum_probs=372.4
Q ss_pred CCCHHHHHhhccccCCCceEEEeCCCCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHHcCCe
Q 043601 26 NLSMVHFLFRNSASYGSKSALIDADSGESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQFPICLLGVIAIGGI 105 (488)
Q Consensus 26 ~~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~ 105 (488)
.+|+.+.+.++++.+|+++|+.+. ++.+||.||.++++++|.+|.+.|+++|++|+++++|+++++++++||+++|++
T Consensus 16 ~~n~~~~~~~~a~~~~~~~a~~~~--~~~~ty~~l~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~~a~~~~G~~ 93 (542)
T PRK07786 16 RQNWVNQLARHALMQPDAPALRFL--GNTTTWRELDDRVAALAGALSRRGVGFGDRVLILMLNRTEFVESVLAANMLGAI 93 (542)
T ss_pred ccCHHHHHHHHHHHCCCCeEEEeC--CCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCeE
Confidence 478999999999999999999987 689999999999999999999999999999999999999999999999999999
Q ss_pred EeecCCCCCHHHHHHHHhhcCCeEEEEccccHHHHhccC-----CCeEEEcccCcccCCCCcCCCCccchHHHHhhcCCC
Q 043601 106 ATTANPVYTVSELSKQVKDSSPKLVVTVPELWERVKDFN-----IPAVLLGSNHIVSPRGLRSSSNIVYFDELIELSGNA 180 (488)
Q Consensus 106 ~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (488)
++|+++.++.+++..+++.++++.++++......+.... ...++...+ ....+..+++++.....
T Consensus 94 ~vpl~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~-- 163 (542)
T PRK07786 94 AVPVNFRLTPPEIAFLVSDCGAHVVVTEAALAPVATAVRDIVPLLSTVVVAGG--------SSDDSVLGYEDLLAEAG-- 163 (542)
T ss_pred EEEcCccCCHHHHHHHHHhCCCcEEEEccchHHHHHHhhhccCccceEEEecC--------CCcccccCHHHHhhccC--
Confidence 999999999999999999999999999987665543321 122222111 01122345555544332
Q ss_pred CCCCCCCCCCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHhhhhhhcC-CCCcEEEEecchhhHHhHHHHHHHHhhC
Q 043601 181 SNFPDVSVKQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTAMDQELAG-ALDYVTLCVLPMFHVFGLSFVVYAQLQK 259 (488)
Q Consensus 181 ~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 259 (488)
..........+++++++|||||||.||+|.+||.++...... ....... ..+++.++..|++|.+|+ ..++.++..
T Consensus 164 ~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~--~~~~~~~~~~~~~~~~~~p~~~~~g~-~~~~~~l~~ 240 (542)
T PRK07786 164 PAHAPVDIPNDSPALIMYTSGTTGRPKGAVLTHANLTGQAMT--CLRTNGADINSDVGFVGVPLFHIAGI-GSMLPGLLL 240 (542)
T ss_pred CCCCCCCCCCCCeEEEEeCCCCCccchhhhhhHHHHHHHHHH--HHHhcCCCCCCceEEEecchHHHHHH-HHHHHHHHc
Confidence 122223455678999999999999999999999999876322 3333333 567899999999999998 788899999
Q ss_pred CceEEEcC--CCCHHHHHHHHHhcCccEEEecHHHHHHHHhcCCccCCCCCCCccEEEEccCCCcHHHHHHHHhhCCCCe
Q 043601 260 GNCVVSMR--KFDLETALRAIEKYRVTHWWVVPPIILALAKNVSLVKKFDLSSLKGIGSGAAPLRKELVEECSKNLPTVT 337 (488)
Q Consensus 260 G~~~~~~~--~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~ 337 (488)
|+++++.+ .+++..+++.++++++|.++++|+++..++.. ..... ...++|.+++||+++++++++.+.+.|++..
T Consensus 241 G~~~v~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~-~~~~~-~~~~lr~i~~gg~~~~~~~~~~~~~~~~~~~ 318 (542)
T PRK07786 241 GAPTVIYPLGAFDPGQLLDVLEAEKVTGIFLVPAQWQAVCAE-QQARP-RDLALRVLSWGAAPASDTLLRQMAATFPEAQ 318 (542)
T ss_pred cCEEEEccCCCcCHHHHHHHHHHcCCeEEEehHHHHHHHHhC-cccCc-cCcceEEEEECCCCCCHHHHHHHHHHcCCCe
Confidence 99999865 57899999999999999999999999999886 32222 2236999999999999999999999998899
Q ss_pred EEeccCcccccccccccCCCCCCCCCCceeecCCCceEEEEeCCCCCCCCCCCcceEEEecC------------------
Q 043601 338 VFQGYGMTETCGVVTVENPLLGVQNSGSTGTLVAGVEAQIVCVDTLKPLPPNQVGELWVRGP------------------ 399 (488)
Q Consensus 338 i~~~YG~tE~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~------------------ 399 (488)
+++.||+||++.+.+............++|+|++++.++|+| +++++++.|+.|||+++|+
T Consensus 319 l~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d-~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~f~ 397 (542)
T PRK07786 319 ILAAFGQTEMSPVTCMLLGEDAIRKLGSVGKVIPTVAARVVD-ENMNDVPVGEVGEIVYRAPTLMSGYWNNPEATAEAFA 397 (542)
T ss_pred EEeeecccccccceEecCcccccccCCCccccCCCceEEEEC-CCCCCCcCCCceEEEEEChhhhhhhcCCHHHHHHHhh
Confidence 999999999987665444333335567899999999999999 6789999999999999985
Q ss_pred --CccccceEEEccCCcEEEEcccCcceeeCcEEe---eHhHHHhcCCCeeeeEEEeecCCCCCceEEEEEEeCCCC-CC
Q 043601 400 --ILMPGDLGYFDEHGQLFIVDRIKELIKCNGFQV---ELEGVLVSHPEILDAVVIPFPDPEAGEVPIAYVVRSPNS-SL 473 (488)
Q Consensus 400 --~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v---~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~-~~ 473 (488)
|+.|||+++++++|.+++.||.+|+|+++|.+| +||+++.++|.|.+++|++.+....++.++++|++.++. ..
T Consensus 398 ~~~~~TGDl~~~~~~g~~~i~GR~~d~i~~~G~~v~~~eiE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~ 477 (542)
T PRK07786 398 GGWFHSGDLVRQDEEGYVWVVDRKKDMIISGGENIYCAEVENVLASHPDIVEVAVIGRADEKWGEVPVAVAAVRNDDAAL 477 (542)
T ss_pred CCcccccceEEEcCCceEEEEecccceEEeCCEEECHHHHHHHHHhCCCccEEEEEeccCcccCceEEEEEEECCCCCCC
Confidence 688999999999999999999999999999999 999999999999999999998877788899999887653 36
Q ss_pred CHHHHHHHHHhhcC
Q 043601 474 TKEDVQKFVANDSQ 487 (488)
Q Consensus 474 ~~~~i~~~~~~~l~ 487 (488)
..++++++++++++
T Consensus 478 ~~~~l~~~l~~~l~ 491 (542)
T PRK07786 478 TLEDLAEFLTDRLA 491 (542)
T ss_pred CHHHHHHHHHhhcc
Confidence 77899999998876
No 41
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=100.00 E-value=3.6e-58 Score=468.37 Aligned_cols=445 Identities=23% Similarity=0.321 Sum_probs=368.5
Q ss_pred CCHHHHHhhccccCCCceEEEeCC----CCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHHc
Q 043601 27 LSMVHFLFRNSASYGSKSALIDAD----SGESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQFPICLLGVIAI 102 (488)
Q Consensus 27 ~~l~~~l~~~a~~~p~~~a~~~~~----~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~ 102 (488)
.|+.+.+.++++.+|+++|++..+ .++.+||+||+++++++|.+|++.|+++|++|+++++|++++++++|||+++
T Consensus 22 ~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~la~~~~ 101 (538)
T TIGR03208 22 RTINDHFDAAVANCPDKPALTAYRDGHGAVRRFSYRELDCRVDRIAVGLARLGVGRGDVVSFQLPNRWEFTALYLACARI 101 (538)
T ss_pred CcHHHHHHHHHHHCCCceEEEeecccCCCcceecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhc
Confidence 589999999999999999997521 2468999999999999999999999999999999999999999999999999
Q ss_pred CCeEeecCCCCCHHHHHHHHhhcCCeEEEEccccH-----HHHhcc-----CCCeEEEcccCcccCCCCcCCCCccchHH
Q 043601 103 GGIATTANPVYTVSELSKQVKDSSPKLVVTVPELW-----ERVKDF-----NIPAVLLGSNHIVSPRGLRSSSNIVYFDE 172 (488)
Q Consensus 103 G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~-----~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (488)
|++++|++|.++.+++.++++.++++++++++... ...... ....+++... .....++.
T Consensus 102 G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~ 170 (538)
T TIGR03208 102 GAVLNPLMPIFRERELSFMLNHADSKVFVVPSVFRGFDHAAMARELQSKLPALRQVVVIDG-----------DGDDSFDR 170 (538)
T ss_pred CEEEeccCcccCHHHHHHHHHhcCCeEEEEccccccccHHHHHHHHhccCCcceEEEEecC-----------CCCcCHHH
Confidence 99999999999999999999999999999987542 111111 0111222111 01112333
Q ss_pred HHhhcCCC--CC----CCCCCCCCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHhhhhhhcCCCCcEEEEecchhhH
Q 043601 173 LIELSGNA--SN----FPDVSVKQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTAMDQELAGALDYVTLCVLPMFHV 246 (488)
Q Consensus 173 ~~~~~~~~--~~----~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (488)
++...... .. .......++++++++|||||||.||+|+++|+++...+ ......+....++++++.+|++|.
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~--~~~~~~~~~~~~d~~l~~~pl~h~ 248 (538)
T TIGR03208 171 VLMTPERDDTPDAAAILAGPRPSPDDVTQLIYTSGTTGEPKGVMHTANTLFSNI--HPYAERLELGGGDVILMASPMAHQ 248 (538)
T ss_pred HhhccccccccccccccccCCCCCCCeEEEEECCCCCCCCcEEEeehHHHHHHH--HHHHhhcCCCCCCeEEEeCCchhH
Confidence 32211100 00 11123567899999999999999999999999998763 334445556788999999999999
Q ss_pred HhHHHHHHHHhhCCceEEEcCCCCHHHHHHHHHhcCccEEEecHHHHHHHHhcCCccCCCCCCCccEEEEccCCCcHHHH
Q 043601 247 FGLSFVVYAQLQKGNCVVSMRKFDLETALRAIEKYRVTHWWVVPPIILALAKNVSLVKKFDLSSLKGIGSGAAPLRKELV 326 (488)
Q Consensus 247 ~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~ 326 (488)
.++...++.++..|+++++.+.+++..+++.+++++++++.++|+++..+... ......+++++|.+++||+++++++.
T Consensus 249 ~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~l~~~~vt~~~~~p~~~~~l~~~-~~~~~~~~~~l~~~~~gG~~~~~~~~ 327 (538)
T TIGR03208 249 TGFMYGLMMPLILNATAVLQDIWNPARAAELIRETGVTFTMASTPFLTDLCRA-VKESGAPVPSLFTFLCAGAPIPGILV 327 (538)
T ss_pred HHHHHHHHHHHHcCCEEEecCccCHHHHHHHHHHhCCeEEecCHHHHHHHHhc-hhccCCCCCcceEEEEcCCCCCHHHH
Confidence 99878889999999999998888999999999999999999999999998876 33334568899999999999999999
Q ss_pred HHHHhhCCCCeEEeccCcccccccccccCCCCCCCCCCceeecCCCceEEEEeCCCCCCCCCCCcceEEEecC-------
Q 043601 327 EECSKNLPTVTVFQGYGMTETCGVVTVENPLLGVQNSGSTGTLVAGVEAQIVCVDTLKPLPPNQVGELWVRGP------- 399 (488)
Q Consensus 327 ~~~~~~~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~------- 399 (488)
+++.+.++ +.+++.||+||++.+..............++|+|++++.++++| +++++++.|+.|||+++|+
T Consensus 328 ~~~~~~~~-~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~g~~v~i~~-~~~~~~~~g~~Gel~v~g~~~~~gy~ 405 (538)
T TIGR03208 328 ERAWELLG-ALIVSAWGMTENGAVTVTEPDDALEKASTTDGRPLPGVEVKVID-ANGAKLSQGETGRLLVRGCSNFGGYL 405 (538)
T ss_pred HHHHHHcC-CeEEeeeccCcCCCccccCcccchhhccCcccccCCCCEEEEEC-CCCCCCcCCCCcEEEEecCccccccc
Confidence 99999886 89999999999987665443322122345789999999999999 5789999999999999885
Q ss_pred ------------CccccceEEEccCCcEEEEcccCcceeeCcEEe---eHhHHHhcCCCeeeeEEEeecCCCCCceEEEE
Q 043601 400 ------------ILMPGDLGYFDEHGQLFIVDRIKELIKCNGFQV---ELEGVLVSHPEILDAVVIPFPDPEAGEVPIAY 464 (488)
Q Consensus 400 ------------~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v---~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~ 464 (488)
||.|||+|+++++|.+++.||.+|+|+.+|++| +||.++.++++|.+++|++.++...++.++++
T Consensus 406 ~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~p~eIE~~l~~~~~v~~~~v~~~~~~~~g~~~~a~ 485 (538)
T TIGR03208 406 KRPHLNSTDAEGWFDTGDLAFQDAEGYIRINGRSKDVIIRGGENIPVVEIENLLYQHPAVAQVAIVAYPDERLGERACAV 485 (538)
T ss_pred CCcccccccCCCceeccceEEECCCCcEEEEeccCceEEECCEEECHHHHHHHHhcCcceeeEEEEeccCCCCCceEEEE
Confidence 689999999999999999999999999999999 99999999999999999999988888999999
Q ss_pred EEeCCCCCCCHHHHHHHHHh-hcC
Q 043601 465 VVRSPNSSLTKEDVQKFVAN-DSQ 487 (488)
Q Consensus 465 v~~~~~~~~~~~~i~~~~~~-~l~ 487 (488)
|++.++...+.+++++++++ +++
T Consensus 486 v~~~~~~~~~~~~l~~~~~~~~l~ 509 (538)
T TIGR03208 486 VVPKPGCTLDFAAMVAFLKAQKVA 509 (538)
T ss_pred EEECCCCCCCHHHHHHHHHhcchh
Confidence 99988777888999999985 453
No 42
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=100.00 E-value=3.4e-58 Score=478.08 Aligned_cols=453 Identities=19% Similarity=0.240 Sum_probs=358.8
Q ss_pred CCCCHHHHHhhccccCCCceEEEeCCC---CcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHH
Q 043601 25 PNLSMVHFLFRNSASYGSKSALIDADS---GESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQFPICLLGVIA 101 (488)
Q Consensus 25 ~~~~l~~~l~~~a~~~p~~~a~~~~~~---~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~ 101 (488)
..+|+.+.+.++ .+|+++|+++.+. .+++||+||.++++++|+.|+++|+++||+|+++++|++++++++|||++
T Consensus 84 ~~~n~~~~~~~~--~~~~~~Al~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~v~~~lA~~~ 161 (655)
T PRK03584 84 ARLNYAENLLRH--RRDDRPAIIFRGEDGPRRELSWAELRRQVAALAAALRALGVGPGDRVAAYLPNIPETVVAMLATAS 161 (655)
T ss_pred CEeeHHHHhhcc--CCCCCeEEEEECCCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHH
Confidence 346788777654 6899999986421 26899999999999999999999999999999999999999999999999
Q ss_pred cCCeEeecCCCCCHHHHHHHHhhcCCeEEEEccccH---------HHHh----cc-CCC-eEEEcccCcccCCCCcCCCC
Q 043601 102 IGGIATTANPVYTVSELSKQVKDSSPKLVVTVPELW---------ERVK----DF-NIP-AVLLGSNHIVSPRGLRSSSN 166 (488)
Q Consensus 102 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~---------~~~~----~~-~~~-~~~~~~~~~~~~~~~~~~~~ 166 (488)
+|++++|+++.++.+.+.++++.++++++|+++... ..+. .. ... .+.+..... .........
T Consensus 162 ~Gav~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~~~~~~ 239 (655)
T PRK03584 162 LGAIWSSCSPDFGVQGVLDRFGQIEPKVLIAVDGYRYGGKAFDRRAKVAELRAALPSLEHVVVVPYLGP--AAAAAALPG 239 (655)
T ss_pred cCcEEEeeCCCCCHHHHHHHHHHcCCcEEEEccccccCCcccchHHHHHHHHhcCCCccEEEEEecCCC--cccccccCC
Confidence 999999999999999999999999999999987532 1111 11 111 222221110 000011122
Q ss_pred ccchHHHHhhcCCCCCCCCCCCCCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHhhhhhhcCCCCcEEEEecchhhH
Q 043601 167 IVYFDELIELSGNASNFPDVSVKQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTAMDQELAGALDYVTLCVLPMFHV 246 (488)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (488)
...+++++..... ..........+++++|+|||||||.||+|++||.+++... .......+...+++++++..++.|.
T Consensus 240 ~~~~~~~~~~~~~-~~~~~~~~~~~~~a~ilyTSGTTG~PKgV~~sh~~~~~~~-~~~~~~~~~~~~~d~~~~~~~~~~~ 317 (655)
T PRK03584 240 ALLWEDFLAPAEA-AELEFEPVPFDHPLWILYSSGTTGLPKCIVHGHGGILLEH-LKELGLHCDLGPGDRFFWYTTCGWM 317 (655)
T ss_pred cccHHHHhhcccc-CCCCceecCCCCcEEEEecCCCCCCCceEEECccHHHHHH-HHHHHHhcCCCCCCEEEEcCCchHH
Confidence 3456665542111 2222345567899999999999999999999999876431 1223344567788999999898887
Q ss_pred HhHHHHHHHHhhCCceEEEcCC----CCHHHHHHHHHhcCccEEEecHHHHHHHHhcCC-ccCCCCCCCccEEEEccCCC
Q 043601 247 FGLSFVVYAQLQKGNCVVSMRK----FDLETALRAIEKYRVTHWWVVPPIILALAKNVS-LVKKFDLSSLKGIGSGAAPL 321 (488)
Q Consensus 247 ~~~~~~~~~~l~~G~~~~~~~~----~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~-~~~~~~l~~lr~v~~~G~~l 321 (488)
.. ..++.++..|+++++.++ .++..+++.++++++|++.++|+++..+.+... .....++++||.+++||+++
T Consensus 318 ~~--~~~~~~L~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~sLr~i~~~Ge~l 395 (655)
T PRK03584 318 MW--NWLVSGLLVGATLVLYDGSPFYPDPNVLWDLAAEEGVTVFGTSAKYLDACEKAGLVPGETHDLSALRTIGSTGSPL 395 (655)
T ss_pred hH--HHHHHHHHcCCEEEEeCCCCCCCCHHHHHHHHHHHCCEEEEcCHHHHHHHHhcCCCccccCChhheEEEEEecCCC
Confidence 54 346688999999998753 578999999999999999999999999876411 12346789999999999999
Q ss_pred cHHHHHHHHhhCC-CCeEEeccCcccccccccccCCCCCCCCCCceeecCCCceEEEEeCCCCCCCCCCCcceEEEecC-
Q 043601 322 RKELVEECSKNLP-TVTVFQGYGMTETCGVVTVENPLLGVQNSGSTGTLVAGVEAQIVCVDTLKPLPPNQVGELWVRGP- 399 (488)
Q Consensus 322 ~~~~~~~~~~~~~-~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~- 399 (488)
++++.+.+.+.++ ++.+.+.||+||++.......+. .....+++|.|.+|++++|+| ++|+++ .|+.|||+|+|+
T Consensus 396 ~~~~~~~~~~~~~~~~~~~~~yG~TE~~~~~~~~~~~-~~~~~g~~g~p~~g~~~~ivd-~~g~~~-~g~~GeL~v~gp~ 472 (655)
T PRK03584 396 PPEGFDWVYEHVKADVWLASISGGTDICSCFVGGNPL-LPVYRGEIQCRGLGMAVEAWD-EDGRPV-VGEVGELVCTKPF 472 (655)
T ss_pred CHHHHHHHHHHhCCCceEEeccChHhhhcccccCCCC-CCcCCCccCCCcCCceeEEEC-CCCCCC-CCCceEEEEccCC
Confidence 9999999999884 58899999999986543322221 134567899999999999999 578888 799999999984
Q ss_pred --------------------------CccccceEEEccCCcEEEEcccCcceeeCcEEe---eHhHHHhcCCCeeeeEEE
Q 043601 400 --------------------------ILMPGDLGYFDEHGQLFIVDRIKELIKCNGFQV---ELEGVLVSHPEILDAVVI 450 (488)
Q Consensus 400 --------------------------~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v---~ie~~l~~~~~v~~~~v~ 450 (488)
+++|||+|++|+||+++++||+||+||++|++| +||.++.+||.|.+++|+
T Consensus 473 p~~~~gy~~~~~~~~~~~~~~~~~~g~~~TGDl~~~d~dG~l~i~GR~dd~Ik~~G~rI~p~EIE~~l~~~p~V~ea~vv 552 (655)
T PRK03584 473 PSMPLGFWNDPDGSRYRDAYFDTFPGVWRHGDWIEITEHGGVVIYGRSDATLNRGGVRIGTAEIYRQVEALPEVLDSLVI 552 (655)
T ss_pred CCCcceeeCCCccchHHHhhhccCCCEeecCCeEEECCCCeEEEEeeccCeeecCcEEECHHHHHHHHHhCCCcceEEEE
Confidence 256899999999999999999999999999999 999999999999999999
Q ss_pred eecCCCCCceEEEEEEeCCCCCCCH---HHHHHHHHhhcCC
Q 043601 451 PFPDPEAGEVPIAYVVRSPNSSLTK---EDVQKFVANDSQL 488 (488)
Q Consensus 451 ~~~~~~~~~~~~~~v~~~~~~~~~~---~~i~~~~~~~l~~ 488 (488)
+.+++..++.++++|+++++...+. ++|+++++++|+.
T Consensus 553 g~~~~~~g~~~~a~vv~~~~~~~~~~~~~~l~~~~~~~L~~ 593 (655)
T PRK03584 553 GQEWPDGDVRMPLFVVLAEGVTLDDALRARIRTTIRTNLSP 593 (655)
T ss_pred eeEcCCCCEEEEEEEEECCCCCCcHHHHHHHHHHHHhhCCC
Confidence 9999888999999999988765554 5789999988763
No 43
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=4.7e-58 Score=462.12 Aligned_cols=425 Identities=29% Similarity=0.419 Sum_probs=362.4
Q ss_pred CCHHHHHhhccccCCCceEEEeCCCCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHHcCCeE
Q 043601 27 LSMVHFLFRNSASYGSKSALIDADSGESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQFPICLLGVIAIGGIA 106 (488)
Q Consensus 27 ~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~ 106 (488)
+|+.++|.++++.+|+++|+.+. ++.+||+||+++++++|++|.+.|+++|++|+++++|++++++++|||+++|+++
T Consensus 2 ~~~~~~l~~~a~~~p~~~a~~~~--~~~~Ty~el~~~~~~~a~~L~~~g~~~~~~v~i~~~~~~~~~~~~la~~~~G~~~ 79 (483)
T PRK03640 2 ETMPNWLKQRAFLTPDRTAIEFE--EKKVTFMELHEAVVSVAGKLAALGVKKGDRVALLMKNGMEMILVIHALQQLGAVA 79 (483)
T ss_pred CcHHHHHHHHHHhCCCceEEEeC--CeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhCCcEE
Confidence 68999999999999999999987 6899999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCHHHHHHHHhhcCCeEEEEccccHHHHhccCCCeEEEcccCcccCCCCcCCCCccchHHHHhhcCCCCCCCCC
Q 043601 107 TTANPVYTVSELSKQVKDSSPKLVVTVPELWERVKDFNIPAVLLGSNHIVSPRGLRSSSNIVYFDELIELSGNASNFPDV 186 (488)
Q Consensus 107 v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (488)
+|+++.++.+++..+++.++++.+++++.......... ...++++...... ......
T Consensus 80 v~i~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~-~~~~~~ 136 (483)
T PRK03640 80 VLLNTRLSREELLWQLDDAEVKCLITDDDFEAKLIPGI----------------------SVKFAELMNGPKE-EAEIQE 136 (483)
T ss_pred EecCcCCCHHHHHHHHHhCCCCEEEEcchhhHHHhhhc----------------------cccHHHHhhcccc-cCCCCC
Confidence 99999999999999999999999999876554432210 0013333222111 112223
Q ss_pred CCCCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHhhhhhhcCCCCcEEEEecchhhHHhHHHHHHHHhhCCceEEEc
Q 043601 187 SVKQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTAMDQELAGALDYVTLCVLPMFHVFGLSFVVYAQLQKGNCVVSM 266 (488)
Q Consensus 187 ~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~ 266 (488)
....+++++++|||||||.||+|.+||.++...+.. ....+...+++++++.+|++|.+++ ..++.++..|+++++.
T Consensus 137 ~~~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~--~~~~~~~~~~d~~l~~~p~~~~~g~-~~~~~~l~~G~~~~~~ 213 (483)
T PRK03640 137 EFDLDEVATIMYTSGTTGKPKGVIQTYGNHWWSAVG--SALNLGLTEDDCWLAAVPIFHISGL-SILMRSVIYGMRVVLV 213 (483)
T ss_pred CCCCCCeEEEEeCCCcCCCCcEEEEecHHHHHHHHH--HHHhcCCCcCcEEEEecCHHHHHHH-HHHHHHHhcCCEEEec
Confidence 456789999999999999999999999998876332 3344567889999999999999998 5678889999999999
Q ss_pred CCCCHHHHHHHHHhcCccEEEecHHHHHHHHhcCCccCCCCCCCccEEEEccCCCcHHHHHHHHhhCCCCeEEeccCccc
Q 043601 267 RKFDLETALRAIEKYRVTHWWVVPPIILALAKNVSLVKKFDLSSLKGIGSGAAPLRKELVEECSKNLPTVTVFQGYGMTE 346 (488)
Q Consensus 267 ~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~i~~~YG~tE 346 (488)
+..++..+++.++++++|++.++|+++..+.+.... . ....++|.+++||+++++.+.+.+.+. ++++++.||+||
T Consensus 214 ~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~-~-~~~~~lr~~~~~g~~~~~~~~~~~~~~--~~~~~~~YG~tE 289 (483)
T PRK03640 214 EKFDAEKINKLLQTGGVTIISVVSTMLQRLLERLGE-G-TYPSSFRCMLLGGGPAPKPLLEQCKEK--GIPVYQSYGMTE 289 (483)
T ss_pred CCCCHHHHHHHHHHhCCcEEEeHHHHHHHHHhCcCc-c-ccCCcceEEEEcCCCCCHHHHHHHHHh--CCCeeeeeccCc
Confidence 989999999999999999999999999999876222 2 345789999999999999999999875 489999999999
Q ss_pred ccccccccCCCCCCCCCCceeecCCCceEEEEeCCCCCCCCCCCcceEEEecC--------------------Cccccce
Q 043601 347 TCGVVTVENPLLGVQNSGSTGTLVAGVEAQIVCVDTLKPLPPNQVGELWVRGP--------------------ILMPGDL 406 (488)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~--------------------~~~tGD~ 406 (488)
++..++...........+++|+|++++.+++.++ +++++.|+.|||+++|+ ||+|||+
T Consensus 290 ~~~~~~~~~~~~~~~~~~~vG~p~~~~~~~i~~~--~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~tGDl 367 (483)
T PRK03640 290 TASQIVTLSPEDALTKLGSAGKPLFPCELKIEKD--GVVVPPFEEGEIVVKGPNVTKGYLNREDATRETFQDGWFKTGDI 367 (483)
T ss_pred ccccccccCcccccccCCCcccccCCcEEEEecC--CCcCCCCCceEEEEECcchhhhhcCCHHHHHHHHhcCCeeccce
Confidence 9765544443333456788999999999999883 48899999999999986 6889999
Q ss_pred EEEccCCcEEEEcccCcceeeCcEEe---eHhHHHhcCCCeeeeEEEeecCCCCCceEEEEEEeCCCCCCCHHHHHHHHH
Q 043601 407 GYFDEHGQLFIVDRIKELIKCNGFQV---ELEGVLVSHPEILDAVVIPFPDPEAGEVPIAYVVRSPNSSLTKEDVQKFVA 483 (488)
Q Consensus 407 ~~~~~~g~l~~~GR~~d~i~~~G~~v---~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~~~~ 483 (488)
+++++||.+++.||++|++|.+|.+| +||.++.++++|.+++|++.+++..++.++++++.. ...+.++++++++
T Consensus 368 ~~~~~~g~l~~~GR~~~~i~~~G~~v~~~~ie~~i~~~~~v~~~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~~~ 445 (483)
T PRK03640 368 GYLDEEGFLYVLDRRSDLIISGGENIYPAEIEEVLLSHPGVAEAGVVGVPDDKWGQVPVAFVVKS--GEVTEEELRHFCE 445 (483)
T ss_pred EEEcCCCCEEEeecccCeEEeCCEEECHHHHHHHHHhCCCeeEEEEEeCCCcccCCceEEEEEeC--CCCCHHHHHHHHH
Confidence 99999999999999999999999999 999999999999999999998888788888888754 3568899999999
Q ss_pred hhcC
Q 043601 484 NDSQ 487 (488)
Q Consensus 484 ~~l~ 487 (488)
++|+
T Consensus 446 ~~l~ 449 (483)
T PRK03640 446 EKLA 449 (483)
T ss_pred Hhcc
Confidence 8875
No 44
>PRK13383 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.8e-58 Score=466.78 Aligned_cols=433 Identities=22% Similarity=0.315 Sum_probs=362.0
Q ss_pred CCCHHHHHhhccccCCCceEEEeCCCCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHHcCCe
Q 043601 26 NLSMVHFLFRNSASYGSKSALIDADSGESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQFPICLLGVIAIGGI 105 (488)
Q Consensus 26 ~~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~ 105 (488)
+.++.+.|.++++.+|+++|+.+. ++.+||+||.++++++|++|++.|+++|++|+++++|++++++++|||+++|++
T Consensus 34 ~~~~~~~~~~~a~~~p~~~a~~~~--~~~lTy~el~~~~~~la~~L~~~gi~~g~~V~i~~~~~~~~~~~~la~~~~G~v 111 (516)
T PRK13383 34 GTNPYTLLAVTAARWPGRTAIIDD--DGALSYRELQRATESLARRLTRDGVAPGRAVGVMCRNGRGFVTAVFAVGLLGAD 111 (516)
T ss_pred CCcHHHHHHHHHHHCCCCcEEEeC--CCcEeHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHhCeE
Confidence 478999999999999999999986 679999999999999999999999999999999999999999999999999999
Q ss_pred EeecCCCCCHHHHHHHHhhcCCeEEEEccccHHHHhccCCCeEEEcccCcccCCCCcCCCCccchHHHHhhcCCCCCCCC
Q 043601 106 ATTANPVYTVSELSKQVKDSSPKLVVTVPELWERVKDFNIPAVLLGSNHIVSPRGLRSSSNIVYFDELIELSGNASNFPD 185 (488)
Q Consensus 106 ~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (488)
++|+++.++.+++..+++.++++.++++++....+.........+... .. .. ... ..
T Consensus 112 ~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~---------------~~-~~-~~~---~~--- 168 (516)
T PRK13383 112 VVPISTEFRSDALAAALRAHHISTVVADNEFAERIAGADDAVAVIDPA---------------TA-GA-EES---GG--- 168 (516)
T ss_pred EEEcCccCCHHHHHHHHhcCCCCEEEEchhHHHHHHhhhcceEEeccc---------------hh-hh-hcC---CC---
Confidence 999999999999999999999999999987766655432222211100 00 00 000 00
Q ss_pred CCCCCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHhhhhhhcCCCCcEEEEecchhhHHhHHHHHHHHhhCCceEEE
Q 043601 186 VSVKQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTAMDQELAGALDYVTLCVLPMFHVFGLSFVVYAQLQKGNCVVS 265 (488)
Q Consensus 186 ~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~ 265 (488)
.....++.++|+|||||||.||+|+++|...................++++++..+|++|.+++ ..++.++..|++++.
T Consensus 169 ~p~~~~~~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~d~~~~~~pl~h~~g~-~~~~~~l~~G~~~~~ 247 (516)
T PRK13383 169 RPAVAAPGRIVLLTSGTTGKPKGVPRAPQLRSAVGVWVTILDRTRLRTGSRISVAMPMFHGLGL-GMLMLTIALGGTVLT 247 (516)
T ss_pred CCCCCCCCcEEEECCCCCCCCCeeeecchhhhhhhhHHhHHhhhccCCCCeEEEecCCcchhhH-HHHHHHHhcCCEEEE
Confidence 0112345679999999999999999999743222111112234456788999999999999998 567778999999999
Q ss_pred cCCCCHHHHHHHHHhcCccEEEecHHHHHHHHhcCCc-cCCCCCCCccEEEEccCCCcHHHHHHHHhhCCCCeEEeccCc
Q 043601 266 MRKFDLETALRAIEKYRVTHWWVVPPIILALAKNVSL-VKKFDLSSLKGIGSGAAPLRKELVEECSKNLPTVTVFQGYGM 344 (488)
Q Consensus 266 ~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~-~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~i~~~YG~ 344 (488)
...+++..+++.++++++|.+.++|+++..+...... ....+++++|.+++||++++++++++|.+.|+ ..+++.||+
T Consensus 248 ~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~g-~~v~~~YG~ 326 (516)
T PRK13383 248 HRHFDAEAALAQASLHRADAFTAVPVVLARILELPPRVRARNPLPQLRVVMSSGDRLDPTLGQRFMDTYG-DILYNGYGS 326 (516)
T ss_pred CCCCCHHHHHHHHHHhCCcEEEecHHHHHHHHhccccccccCCCCceEEEEECCCCCCHHHHHHHHHHcC-chhhhcccc
Confidence 8889999999999999999999999999999875221 12345789999999999999999999999997 889999999
Q ss_pred ccccccccccCCCCCCCCCCceeecCCCceEEEEeCCCCCCCCCCCcceEEEecC-----------------CccccceE
Q 043601 345 TETCGVVTVENPLLGVQNSGSTGTLVAGVEAQIVCVDTLKPLPPNQVGELWVRGP-----------------ILMPGDLG 407 (488)
Q Consensus 345 tE~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~-----------------~~~tGD~~ 407 (488)
||++..+.... .......+++|+|++++.++|+| +++++++.|+.|||+++|+ |++|||+|
T Consensus 327 tE~~~~~~~~~-~~~~~~~~~~G~~~~~~~~~i~d-~~~~~~~~g~~Gel~v~g~~~~~~Y~~~~~~~~~~g~~~TGDl~ 404 (516)
T PRK13383 327 TEVGIGALATP-ADLRDAPETVGKPVAGCPVRILD-RNNRPVGPRVTGRIFVGGELAGTRYTDGGGKAVVDGMTSTGDMG 404 (516)
T ss_pred cccccceeccc-cccccCCCcccCCCCCcEEEEEC-CCCCCCCCCCceEEEEecCcccccccCCchhheecCceecceeE
Confidence 99986554332 22234567899999999999999 5789999999999999985 56799999
Q ss_pred EEccCCcEEEEcccCcceeeCcEEe---eHhHHHhcCCCeeeeEEEeecCCCCCceEEEEEEeCCCCCCCHHHHHHHHHh
Q 043601 408 YFDEHGQLFIVDRIKELIKCNGFQV---ELEGVLVSHPEILDAVVIPFPDPEAGEVPIAYVVRSPNSSLTKEDVQKFVAN 484 (488)
Q Consensus 408 ~~~~~g~l~~~GR~~d~i~~~G~~v---~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~~~~~ 484 (488)
+++++|++++.||.+|+||++|.+| +||.++.++|.|.++++++.++...++.+.++|+++++...+.+++++++++
T Consensus 405 ~~d~~G~l~i~GR~~~~i~~~G~~v~~~eiE~~l~~~~~v~~~~vv~~~~~~~g~~~~~~v~~~~~~~~~~~~l~~~~~~ 484 (516)
T PRK13383 405 YLDNAGRLFIVGREDDMIISGGENVYPRAVENALAAHPAVADNAVIGVPDERFGHRLAAFVVLHPGSGVDAAQLRDYLKD 484 (516)
T ss_pred EEcCCccEEEeccccceEEECCEEECHHHHHHHHHhCCCeeEEEEEeccccccCceEEEEEEECCCCCCCHHHHHHHHHH
Confidence 9999999999999999999999999 9999999999999999999998888899999999988777788999999998
Q ss_pred hcC
Q 043601 485 DSQ 487 (488)
Q Consensus 485 ~l~ 487 (488)
+++
T Consensus 485 ~l~ 487 (516)
T PRK13383 485 RVS 487 (516)
T ss_pred hcc
Confidence 875
No 45
>PRK05852 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4.1e-58 Score=467.50 Aligned_cols=449 Identities=24% Similarity=0.329 Sum_probs=361.6
Q ss_pred CCHHHHHhhccccCCCceEEEeCCCCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHHcCCeE
Q 043601 27 LSMVHFLFRNSASYGSKSALIDADSGESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQFPICLLGVIAIGGIA 106 (488)
Q Consensus 27 ~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~ 106 (488)
-++.++|.++++++|+++|+++.++.+.+||+||.++++++|++|.+.|+++|++|+++++|++++++++|||+++|+++
T Consensus 16 ~~l~~~l~~~a~~~p~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~ 95 (534)
T PRK05852 16 PRIADLVEVAATRLPEAPALVVTADRIAISYRDLARLVDDLAGQLTRSGLLPGDRVALRMGSNAEFVVALLAASRADLVV 95 (534)
T ss_pred ccHHHHHHHHHHhCCCCcEEEecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcHHHHHHHHHHHHcCcEE
Confidence 67999999999999999999886545789999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCHHHHHHHHhhcCCeEEEEccccHHHHhccCC---Ce-EEEcccCcccCCCCcCCCCccchHHHHhhcCCCCC
Q 043601 107 TTANPVYTVSELSKQVKDSSPKLVVTVPELWERVKDFNI---PA-VLLGSNHIVSPRGLRSSSNIVYFDELIELSGNASN 182 (488)
Q Consensus 107 v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (488)
+|+++.++.+++.++++.++++++|++............ .. +.+..... ......... ..........
T Consensus 96 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~-~~~~~~~~~~ 167 (534)
T PRK05852 96 VPLDPALPIAEQRVRSQAAGARVVLIDADGPHDRAEPTTRWWPLTVNVGGDSG-------PSGGTLSVH-LDAATEPTPA 167 (534)
T ss_pred eecCCCCCcHHHHHHHHhCCCCEEEEcCCCcchhccccccccceeeeeccccc-------ccccccccc-cccccCCCcc
Confidence 999999999999999999999999998653322111100 00 11110000 000000000 0000000001
Q ss_pred CCCCCCCCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHhhhhhhcCCCCcEEEEecchhhHHhHHHHHHHHhhCCce
Q 043601 183 FPDVSVKQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTAMDQELAGALDYVTLCVLPMFHVFGLSFVVYAQLQKGNC 262 (488)
Q Consensus 183 ~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~ 262 (488)
........++.++++|||||||.||+|+++|.++...+. .....+...+++++++..|++|.+++...++.++..|++
T Consensus 168 ~~~~~~~~~~~a~il~TSGTTG~PKgv~~~~~~~~~~~~--~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~ 245 (534)
T PRK05852 168 TSTPEGLRPDDAMIMFTGGTTGLPKMVPWTHANIASSVR--AIITGYRLSPRDATVAVMPLYHGHGLIAALLATLASGGA 245 (534)
T ss_pred ccccCCCCCCceEEEeCCCCCCCCcEEEecHHHHHHHHH--HHHHHhCCCCcceEEEecCcchhHHHHHHHHHHHhcCCe
Confidence 111122356889999999999999999999999987633 344556678899999999999999998888999999999
Q ss_pred EEEcC--CCCHHHHHHHHHhcCccEEEecHHHHHHHHhcCCcc-CCCCCCCccEEEEccCCCcHHHHHHHHhhCCCCeEE
Q 043601 263 VVSMR--KFDLETALRAIEKYRVTHWWVVPPIILALAKNVSLV-KKFDLSSLKGIGSGAAPLRKELVEECSKNLPTVTVF 339 (488)
Q Consensus 263 ~~~~~--~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~-~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~i~ 339 (488)
+++.. .+++..+++.++++++|+++++|+++..+.+..... ...+++++|.++++|+++++++++.|.+.|+ ..++
T Consensus 246 ~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~~G~~~~~~~~~~~~~~~~-~~v~ 324 (534)
T PRK05852 246 VLLPARGRFSAHTFWDDIKAVGATWYTAVPTIHQILLERAATEPSGRKPAALRFIRSCSAPLTAETAQALQTEFA-APVV 324 (534)
T ss_pred EEeCCCcCcCHHHHHHHHHHcCCcEEEcChHHHHHHHhhcccccccccCCCeeEEEECCCCCCHHHHHHHHHHhC-CChh
Confidence 88864 478899999999999999999999999998762211 1345789999999999999999999999996 8999
Q ss_pred eccCcccccccccccCCCC---CCCCCCceeec--CCCceEEEEeCCCCCCCCCCCcceEEEecC---------------
Q 043601 340 QGYGMTETCGVVTVENPLL---GVQNSGSTGTL--VAGVEAQIVCVDTLKPLPPNQVGELWVRGP--------------- 399 (488)
Q Consensus 340 ~~YG~tE~~~~~~~~~~~~---~~~~~~~~g~~--~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~--------------- 399 (488)
+.||+||++..++...... ......++|.+ .+++.++++| +++++++.|+.|||+++|+
T Consensus 325 ~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~g~~~~i~d-~~g~~~~~g~~Gel~v~g~~v~~gY~~~~~~t~~ 403 (534)
T PRK05852 325 CAFGMTEATHQVTTTQIEGIGQTENPVVSTGLVGRSTGAQIRIVG-SDGLPLPAGAVGEVWLRGTTVVRGYLGDPTITAA 403 (534)
T ss_pred hccCccccchhhhcCCccccccccCcccccccCCCCCCCeEEEEC-CCCCCCCCCCceEEEEecCcccchhcCCcccchh
Confidence 9999999987665432210 01111234444 6899999999 5789999999999999885
Q ss_pred -----CccccceEEEccCCcEEEEcccCcceeeCcEEe---eHhHHHhcCCCeeeeEEEeecCCCCCceEEEEEEeCCCC
Q 043601 400 -----ILMPGDLGYFDEHGQLFIVDRIKELIKCNGFQV---ELEGVLVSHPEILDAVVIPFPDPEAGEVPIAYVVRSPNS 471 (488)
Q Consensus 400 -----~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v---~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~ 471 (488)
|++|||+|++++||++++.||.+|+|+.+|.+| +||.++.++|+|.+++|++.++...++.++++|+.+++.
T Consensus 404 ~~~~g~~~TGD~~~~d~dG~l~~~gR~~d~i~~~G~~v~~~~iE~~l~~~~~V~~~~v~g~~~~~~g~~~~~~vv~~~~~ 483 (534)
T PRK05852 404 NFTDGWLRTGDLGSLSAAGDLSIRGRIKELINRGGEKISPERVEGVLASHPNVMEAAVFGVPDQLYGEAVAAVIVPRESA 483 (534)
T ss_pred hhcCCCcccCceEEEeCCCcEEEEecchhhEEECCEEECHHHHHHHHHhCCCeeeEEEEecCCcCcCceEEEEEEECCCC
Confidence 689999999999999999999999999999999 999999999999999999999988889999999987776
Q ss_pred CCCHHHHHHHHHhhcC
Q 043601 472 SLTKEDVQKFVANDSQ 487 (488)
Q Consensus 472 ~~~~~~i~~~~~~~l~ 487 (488)
..+.++++++++++|+
T Consensus 484 ~~~~~~i~~~~~~~l~ 499 (534)
T PRK05852 484 PPTAEELVQFCRERLA 499 (534)
T ss_pred CCCHHHHHHHHHHhcc
Confidence 6788999999999886
No 46
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=100.00 E-value=8e-58 Score=464.30 Aligned_cols=445 Identities=24% Similarity=0.363 Sum_probs=373.0
Q ss_pred CHHHHHhhccccCCCceEEEeCCCCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHHcCCeEe
Q 043601 28 SMVHFLFRNSASYGSKSALIDADSGESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQFPICLLGVIAIGGIAT 107 (488)
Q Consensus 28 ~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v 107 (488)
++.+.|.+.++.+|+++|+.+. ++++||+||++++.++|++|++.|+++|++|+++++|++++++++|||+++|++++
T Consensus 1 ~~~~~~~~~~~~~p~~~a~~~~--~~~~ty~~l~~~v~~~a~~l~~~g~~~~~~V~i~~~n~~~~~~~~lA~~~~G~~~v 78 (515)
T TIGR03098 1 LLHHLLEDAAARLPDATALVHH--DRTLTYAALSERVLALASGLRGLGLARGERVAIYLDKRLETVTAMFGAALAGGVFV 78 (515)
T ss_pred CHHHHHHHHHHHCCCCeEEEEC--CceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcCEEEE
Confidence 4678999999999999999987 67999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHHHHhhcCCeEEEEccccHHHHhccCC-----C-eEEEcccCcccCCCCcCCCCccchHHHHhhcCCCC
Q 043601 108 TANPVYTVSELSKQVKDSSPKLVVTVPELWERVKDFNI-----P-AVLLGSNHIVSPRGLRSSSNIVYFDELIELSGNAS 181 (488)
Q Consensus 108 ~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~-----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (488)
|+++..+.+++..+++.++++++|++.+....+..... . .+.+...... .........++++.....
T Consensus 79 ~l~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~--- 151 (515)
T TIGR03098 79 PINPLLKAEQVAHILADCNVRLLVTSSERLDLLHPALPGCHDLRTLILVGEPAHA----SEGGGESPSWPKLLALGD--- 151 (515)
T ss_pred eCCCCCCHHHHHHHHHcCCCeEEEEccchhhhhHhhhhcccccceEEEecCcccc----cCCccccccHHHhhcccc---
Confidence 99999999999999999999999999876655433211 1 1222211000 001122334555443222
Q ss_pred CCCCCCCCCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHhhhhhhcCCCCcEEEEecchhhHHhHHHHHHHHhhCCc
Q 043601 182 NFPDVSVKQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTAMDQELAGALDYVTLCVLPMFHVFGLSFVVYAQLQKGN 261 (488)
Q Consensus 182 ~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~ 261 (488)
.........+++++++|||||||.||+|.+||.++...+. .....+....++++++.+|++|.+++ ..++.++..|+
T Consensus 152 ~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~l~~~~~--~~~~~~~~~~~d~~l~~~p~~~~~~~-~~~~~~l~~G~ 228 (515)
T TIGR03098 152 ADPPHPVIDSDMAAILYTSGSTGRPKGVVLSHRNLVAGAQ--SVATYLENRPDDRLLAVLPLSFDYGF-NQLTTAFYVGA 228 (515)
T ss_pred ccccCCCCcCCeEEEEECCCCCCCCceEEEecHHHHHHHH--HHHHHhCCCcccEEEEECchhhHhHH-HHHHHHHHcCC
Confidence 1122334567899999999999999999999999987733 34455567788999999999999998 67889999999
Q ss_pred eEEEcCCCCHHHHHHHHHhcCccEEEecHHHHHHHHhcCCccCCCCCCCccEEEEccCCCcHHHHHHHHhhCCCCeEEec
Q 043601 262 CVVSMRKFDLETALRAIEKYRVTHWWVVPPIILALAKNVSLVKKFDLSSLKGIGSGAAPLRKELVEECSKNLPTVTVFQG 341 (488)
Q Consensus 262 ~~~~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~i~~~ 341 (488)
++++.+.+++..+++.++++++|++.++|+++..+.+. . ....+++++|.++++|+++++++.+.+++.+++..+++.
T Consensus 229 ~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~-~-~~~~~~~~l~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~ 306 (515)
T TIGR03098 229 TVVLHDYLLPRDVLKALEKHGITGLAAVPPLWAQLAQL-D-WPESAAPSLRYLTNSGGAMPRATLSRLRSFLPNARLFLM 306 (515)
T ss_pred EEEEcCCCCHHHHHHHHHHcCCceEecChHHHHHHHhc-c-cCCCCccceEEEEecCCcCCHHHHHHHHHHCCCCeEeee
Confidence 99999889999999999999999999999999998864 2 222467899999999999999999999999977899999
Q ss_pred cCcccccccccccCCCCCCCCCCceeecCCCceEEEEeCCCCCCCCCCCcceEEEecC----------------------
Q 043601 342 YGMTETCGVVTVENPLLGVQNSGSTGTLVAGVEAQIVCVDTLKPLPPNQVGELWVRGP---------------------- 399 (488)
Q Consensus 342 YG~tE~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~---------------------- 399 (488)
||+||++...... ......+.+++|+|++++.++++| +++++++.|+.|||+++|+
T Consensus 307 YG~tE~~~~~~~~-~~~~~~~~~~vG~~~~~~~~~i~~-~~~~~~~~~~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~ 384 (515)
T TIGR03098 307 YGLTEAFRSTYLP-PEEVDRRPDSIGKAIPNAEVLVLR-EDGSECAPGEEGELVHRGALVAMGYWNDPEKTAERFRPLPP 384 (515)
T ss_pred eccccccceEecc-cccccCCCCCcceecCCCEEEEEC-CCCCCCCCCCceEEEEcCchhhccccCCchhhhhhhhccCC
Confidence 9999997544332 222245677999999999999999 6789999999999999874
Q ss_pred ----------CccccceEEEccCCcEEEEcccCcceeeCcEEe---eHhHHHhcCCCeeeeEEEeecCCCCCceEEEEEE
Q 043601 400 ----------ILMPGDLGYFDEHGQLFIVDRIKELIKCNGFQV---ELEGVLVSHPEILDAVVIPFPDPEAGEVPIAYVV 466 (488)
Q Consensus 400 ----------~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v---~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~ 466 (488)
|+.|||+|+++++|++++.||.+|+|+.+|.+| +||+++.++|.|.+++|++.+++..++.++++++
T Consensus 385 ~~~~~~~~~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~eiE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~~~ 464 (515)
T TIGR03098 385 RPGELHLPELAVWSGDTVRRDEEGFLYFVGRRDEMIKTSGYRVSPTEVEEVAYATGLVAEAVAFGVPDPTLGQAIVLVVT 464 (515)
T ss_pred ccccccccccceeccceEEEcCCceEEEEeccccceecCCEEeCHHHHHHHHhcCCCeeEEEEEeccCcccCceEEEEEE
Confidence 367899999999999999999999999999999 9999999999999999999999888999999998
Q ss_pred eCCCCCCCHHHHHHHHHhhcCC
Q 043601 467 RSPNSSLTKEDVQKFVANDSQL 488 (488)
Q Consensus 467 ~~~~~~~~~~~i~~~~~~~l~~ 488 (488)
..++...+.++++++++++|+.
T Consensus 465 ~~~~~~~~~~~l~~~l~~~l~~ 486 (515)
T TIGR03098 465 PPGGEELDRAALLAECRARLPN 486 (515)
T ss_pred eCCCCCCCHHHHHHHHHhhCcc
Confidence 8777778889999999998863
No 47
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=100.00 E-value=6.3e-58 Score=464.87 Aligned_cols=447 Identities=26% Similarity=0.347 Sum_probs=370.4
Q ss_pred CCHHHHHhhccccCCCceEEEeCC---CCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHHcC
Q 043601 27 LSMVHFLFRNSASYGSKSALIDAD---SGESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQFPICLLGVIAIG 103 (488)
Q Consensus 27 ~~l~~~l~~~a~~~p~~~a~~~~~---~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G 103 (488)
-|+.+++.++++++|+++|+...+ +.+.+||+||+++++++|+.|.++|+++|++|+++++|+.++++++|||+++|
T Consensus 7 ~~l~~~~~~~a~~~p~~~a~~~~~~~~~~~~~ty~~l~~~v~~la~~L~~~g~~~~~~v~i~~~n~~~~~~~~la~~~~G 86 (517)
T PRK08008 7 QHLRQMWDDLADVYGHKTALIFESSGGVVRRYSYLELNEEINRTANLFYSLGIRKGDKVALHLDNCPEFIFCWFGLAKIG 86 (517)
T ss_pred ccHHHHHHHHHHHCCCceEEEcccCCCccceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcC
Confidence 479999999999999999998653 13789999999999999999999999999999999999999999999999999
Q ss_pred CeEeecCCCCCHHHHHHHHhhcCCeEEEEccccHHHHhcc------CCCeEEEcccCcccCCCCcCCCCccchHHHHhhc
Q 043601 104 GIATTANPVYTVSELSKQVKDSSPKLVVTVPELWERVKDF------NIPAVLLGSNHIVSPRGLRSSSNIVYFDELIELS 177 (488)
Q Consensus 104 ~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (488)
++++++++.++.+++..+++.++++.++++.+..+.+... ..+.+.+..... .......++++.....
T Consensus 87 ~~~v~l~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~ 160 (517)
T PRK08008 87 AIMVPINARLLREESAWILQNSQASLLVTSAQFYPMYRQIQQEDATPLRHICLTRVAL------PADDGVSSFTQLKAQQ 160 (517)
T ss_pred eEEEEcCcccCHHHHHHHHHhcCceEEEEecchhHHHHHHHhhccccCcEEEEecCCC------cccccccCHHHHhccC
Confidence 9999999999999999999999999999998766554432 112222221110 1112233444443322
Q ss_pred CCCCCCCCCCCCCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHhhhhhhcCCCCcEEEEecchhhHHhHHHHHHHHh
Q 043601 178 GNASNFPDVSVKQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTAMDQELAGALDYVTLCVLPMFHVFGLSFVVYAQL 257 (488)
Q Consensus 178 ~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 257 (488)
.. .........++++++++|||||||.||+|++||.++...... .........++++++.+|++|..+....++.++
T Consensus 161 ~~-~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~--~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l 237 (517)
T PRK08008 161 PA-TLCYAPPLSTDDTAEILFTSGTTSRPKGVVITHYNLRFAGYY--SAWQCALRDDDVYLTVMPAFHIDCQCTAAMAAF 237 (517)
T ss_pred Cc-cccccCCCCCCCeEEEEECCCCCCCCcEEEEehHHHHHHHHH--HhhhcCCCCCCeEEEecCcHHHHHHHHHHHHHH
Confidence 21 111223346689999999999999999999999999865221 222334577899999999999887778889999
Q ss_pred hCCceEEEcCCCCHHHHHHHHHhcCccEEEecHHHHHHHHhcCCccCCCCCCCccEEEEccCCCcHHHHHHHHhhCCCCe
Q 043601 258 QKGNCVVSMRKFDLETALRAIEKYRVTHWWVVPPIILALAKNVSLVKKFDLSSLKGIGSGAAPLRKELVEECSKNLPTVT 337 (488)
Q Consensus 258 ~~G~~~~~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~ 337 (488)
..|+++++.+++++..+++.++++++|++.++|+++..++.. .........+++.+.+++ ++++++.+.|.+.++ .+
T Consensus 238 ~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~-~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~-~~ 314 (517)
T PRK08008 238 SAGATFVLLEKYSARAFWGQVCKYRATITECIPMMIRTLMVQ-PPSANDRQHCLREVMFYL-NLSDQEKDAFEERFG-VR 314 (517)
T ss_pred hcCcEEEEccccCHHHHHHHHHHcCCcEEechHHHHHHHHhC-CCccccccccceeeEEec-CCCHHHHHHHHHHhC-Ce
Confidence 999999999999999999999999999999999999998875 333334456788877754 789999999999886 99
Q ss_pred EEeccCcccccccccccCCCCCCCCCCceeecCCCceEEEEeCCCCCCCCCCCcceEEEecC------------------
Q 043601 338 VFQGYGMTETCGVVTVENPLLGVQNSGSTGTLVAGVEAQIVCVDTLKPLPPNQVGELWVRGP------------------ 399 (488)
Q Consensus 338 i~~~YG~tE~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~------------------ 399 (488)
+++.||+||++..+....... .....++|.|++++.++++| +++++++.|+.|||+++|+
T Consensus 315 ~~~~YG~tE~~~~~~~~~~~~-~~~~~~~G~~~~g~~~~i~d-~~~~~~~~g~~Gel~v~g~~~~~~~~gy~~~~~~~~~ 392 (517)
T PRK08008 315 LLTSYGMTETIVGIIGDRPGD-KRRWPSIGRPGFCYEAEIRD-DHNRPLPAGEIGEICIKGVPGKTIFKEYYLDPKATAK 392 (517)
T ss_pred EEeeccccccccccccCCccc-cccCCccccCCCCcEEEEEC-CCCCCCCCCCcceEEEeCCCCcchhhhHhCChHHHhh
Confidence 999999999986555443322 34567899999999999999 6889999999999999972
Q ss_pred ------CccccceEEEccCCcEEEEcccCcceeeCcEEe---eHhHHHhcCCCeeeeEEEeecCCCCCceEEEEEEeCCC
Q 043601 400 ------ILMPGDLGYFDEHGQLFIVDRIKELIKCNGFQV---ELEGVLVSHPEILDAVVIPFPDPEAGEVPIAYVVRSPN 470 (488)
Q Consensus 400 ------~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v---~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~ 470 (488)
|++|||+|+++++|.+++.||.+|+||.+|.+| +||.++.+++.|.+++|++.+++..++.+.++|+++++
T Consensus 393 ~~~~~g~~~TGDl~~~~~~g~~~~~GR~~d~i~~~G~~i~p~~iE~~l~~~~~v~~~~v~g~~~~~~~~~~~~~v~~~~~ 472 (517)
T PRK08008 393 VLEADGWLHTGDTGYVDEEGFFYFVDRRCNMIKRGGENVSCVELENIIATHPKIQDIVVVGIKDSIRDEAIKAFVVLNEG 472 (517)
T ss_pred cccCCCCeeccceEEECCCCcEEEeecccceEEeCCEEECHHHHHHHHHhCCceeeEEEEccCCCCCCceEEEEEEECCC
Confidence 789999999999999999999999999999999 99999999999999999999988888899999999988
Q ss_pred CCCCHHHHHHHHHhhcC
Q 043601 471 SSLTKEDVQKFVANDSQ 487 (488)
Q Consensus 471 ~~~~~~~i~~~~~~~l~ 487 (488)
...+.++++++++++++
T Consensus 473 ~~~~~~~l~~~~~~~l~ 489 (517)
T PRK08008 473 ETLSEEEFFAFCEQNMA 489 (517)
T ss_pred CCCCHHHHHHHHHhhcc
Confidence 77888999999998875
No 48
>PRK12583 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.2e-57 Score=467.38 Aligned_cols=451 Identities=26% Similarity=0.387 Sum_probs=373.3
Q ss_pred CCCHHHHHhhccccCCCceEEEeCCCCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHHcCCe
Q 043601 26 NLSMVHFLFRNSASYGSKSALIDADSGESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQFPICLLGVIAIGGI 105 (488)
Q Consensus 26 ~~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~ 105 (488)
..++.++|.+.++++|+++|+++.+.++.+||+||.++++++|++|.+.|+++|++|+++++|++++++++|||+++|++
T Consensus 17 ~~~l~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~~l~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~~~~~~a~~~~G~~ 96 (558)
T PRK12583 17 TQTIGDAFDATVARFPDREALVVRHQALRYTWRQLADAVDRLARGLLALGVQPGDRVGIWAPNCAEWLLTQFATARIGAI 96 (558)
T ss_pred cCcHHHHHHHHHHHCCCCeEEEecCCCcEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHHHHHHHHHHhhCCE
Confidence 36899999999999999999998765789999999999999999999999999999999999999999999999999999
Q ss_pred EeecCCCCCHHHHHHHHhhcCCeEEEEccccH-----HHHhccC---------------CC--eEEEcccCcccCCCCcC
Q 043601 106 ATTANPVYTVSELSKQVKDSSPKLVVTVPELW-----ERVKDFN---------------IP--AVLLGSNHIVSPRGLRS 163 (488)
Q Consensus 106 ~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~-----~~~~~~~---------------~~--~~~~~~~~~~~~~~~~~ 163 (488)
++++++.++.+++..+++.++++.+|+++... ..+.... .+ ...+.... ..
T Consensus 97 ~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~ 169 (558)
T PRK12583 97 LVNINPAYRASELEYALGQSGVRWVICADAFKTSDYHAMLQELLPGLAEGQPGALACERLPELRGVVSLAP-------AP 169 (558)
T ss_pred EEecCCCCCHHHHHHHHHhcCCcEEEEeccccccchhHHHHHHhhhhccccccccccccCCcceEEEEecC-------CC
Confidence 99999999999999999999999999976432 1111100 00 00000000 01
Q ss_pred CCCccchHHHHhhcCCC----CCCCCCCCCCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHhhhhhhcCCCCcEEEE
Q 043601 164 SSNIVYFDELIELSGNA----SNFPDVSVKQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTAMDQELAGALDYVTLC 239 (488)
Q Consensus 164 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~ 239 (488)
......+++........ .........++++++++|||||||.||+|.+||.++..++. .....+...+++++++
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGsTG~PK~v~~s~~~l~~~~~--~~~~~~~~~~~d~~~~ 247 (558)
T PRK12583 170 PPGFLAWHELQARGETVSREALAERQASLDRDDPINIQYTSGTTGFPKGATLSHHNILNNGY--FVAESLGLTEHDRLCV 247 (558)
T ss_pred CccccchHhhhhcccccccccccccccccCCCCcEEEEECCCCCCCCceEEeeHHHHHHHHH--HHHHHhCCCCCCeEEE
Confidence 11223344333221100 01112234578899999999999999999999999987633 3445566778899999
Q ss_pred ecchhhHHhHHHHHHHHhhCCceEEEc-CCCCHHHHHHHHHhcCccEEEecHHHHHHHHhcCCccCCCCCCCccEEEEcc
Q 043601 240 VLPMFHVFGLSFVVYAQLQKGNCVVSM-RKFDLETALRAIEKYRVTHWWVVPPIILALAKNVSLVKKFDLSSLKGIGSGA 318 (488)
Q Consensus 240 ~~~~~~~~~~~~~~~~~l~~G~~~~~~-~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~v~~~G 318 (488)
..|++|.+|....++.++..|+++++. ..+++..+++.++++++|+++++|+++..++.. ......+++++|.+++||
T Consensus 248 ~~p~~~~~g~~~~~~~~l~~g~~v~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~-~~~~~~~~~~lr~i~~~G 326 (558)
T PRK12583 248 PVPLYHCFGMVLANLGCMTVGACLVYPNEAFDPLATLQAVEEERCTALYGVPTMFIAELDH-PQRGNFDLSSLRTGIMAG 326 (558)
T ss_pred ecCchhhhhHHHHHHHHHhcCceEEeecCCCCHHHHHHHHHHcCCeEEeccHHHHHHHHcc-ccccCCCchhheEEEecC
Confidence 999999999988889999999999865 457899999999999999999999999888876 444456789999999999
Q ss_pred CCCcHHHHHHHHhhCCCCeEEeccCcccccccccccCCC-CCCCCCCceeecCCCceEEEEeCCCCCCCCCCCcceEEEe
Q 043601 319 APLRKELVEECSKNLPTVTVFQGYGMTETCGVVTVENPL-LGVQNSGSTGTLVAGVEAQIVCVDTLKPLPPNQVGELWVR 397 (488)
Q Consensus 319 ~~l~~~~~~~~~~~~~~~~i~~~YG~tE~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~ 397 (488)
+++++++.+.+.+.++...+.+.||+||++.+++..... ....+..++|+|.+++.++++|++ +++++.|+.|||+++
T Consensus 327 ~~~~~~~~~~~~~~~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~vG~p~~~~~~~i~d~~-~~~~~~g~~Gel~v~ 405 (558)
T PRK12583 327 APCPIEVMRRVMDEMHMAEVQIAYGMTETSPVSLQTTAADDLERRVETVGRTQPHLEVKVVDPD-GATVPRGEIGELCTR 405 (558)
T ss_pred CCCCHHHHHHHHHHcCCcceeccccccccccceeccCcccccccccCCCCccCCCCeEEEECCC-CCCCCCCCeeEEEEE
Confidence 999999999999999867899999999999776654322 112356789999999999999965 899999999999998
Q ss_pred cC---------------------CccccceEEEccCCcEEEEcccCcceeeCcEEe---eHhHHHhcCCCeeeeEEEeec
Q 043601 398 GP---------------------ILMPGDLGYFDEHGQLFIVDRIKELIKCNGFQV---ELEGVLVSHPEILDAVVIPFP 453 (488)
Q Consensus 398 g~---------------------~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v---~ie~~l~~~~~v~~~~v~~~~ 453 (488)
|+ |+.|||+|++++||.+++.||++|+++++|.+| +||+++.++++|.+++|++.+
T Consensus 406 g~~~~~gy~~~~~~~~~~~~~~~~~~TGDl~~~~~dg~l~i~GR~~~~i~~~G~~v~~~~IE~~l~~~~~v~~~~v~~~~ 485 (558)
T PRK12583 406 GYSVMKGYWNNPEATAESIDEDGWMHTGDLATMDEQGYVRIVGRSKDMIIRGGENIYPREIEEFLFTHPAVADVQVFGVP 485 (558)
T ss_pred eCccchhhcCChHHHHhhcCCCCCeeccceEEECCCccEEEEecccceeEECCEEeCHHHHHHHHHhCCCeeEEEEEeee
Confidence 74 588999999999999999999999999999999 999999999999999999999
Q ss_pred CCCCCceEEEEEEeCCCCCCCHHHHHHHHHhhcC
Q 043601 454 DPEAGEVPIAYVVRSPNSSLTKEDVQKFVANDSQ 487 (488)
Q Consensus 454 ~~~~~~~~~~~v~~~~~~~~~~~~i~~~~~~~l~ 487 (488)
+...++.++++|+.+++...+.++++++++++|+
T Consensus 486 ~~~~~~~~~~~v~~~~~~~~~~~~i~~~~~~~L~ 519 (558)
T PRK12583 486 DEKYGEEIVAWVRLHPGHAASEEELREFCKARIA 519 (558)
T ss_pred cCCCCcEEEEEEEECCCCCCCHHHHHHHHHhhcc
Confidence 8888889999999988777788999999999876
No 49
>PRK07514 malonyl-CoA synthase; Validated
Probab=100.00 E-value=1.1e-57 Score=461.96 Aligned_cols=437 Identities=27% Similarity=0.396 Sum_probs=371.2
Q ss_pred CCHHHHHhhccccCCCceEEEeCCCCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHHcCCeE
Q 043601 27 LSMVHFLFRNSASYGSKSALIDADSGESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQFPICLLGVIAIGGIA 106 (488)
Q Consensus 27 ~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~ 106 (488)
.++.+++.+++ .+|++.|+.+. +++.+||+||.++++++|++|++.|+++|++|+++++|++++++++|||+++|+++
T Consensus 3 ~~l~~~~~~~~-~~~~~~a~~~~-~~~~~Ty~eL~~~~~~la~~L~~~g~~~gd~v~i~~~~~~e~~v~~la~~~~G~~~ 80 (504)
T PRK07514 3 NNLFDALRAAF-ADRDAPFIETP-DGLRYTYGDLDAASARLANLLVALGVKPGDRVAVQVEKSPEALALYLATLRAGAVF 80 (504)
T ss_pred ccHHHHHHHHh-hCCCCeEEEeC-CCCEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCcEE
Confidence 57899999999 99999999874 26899999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCHHHHHHHHhhcCCeEEEEccccHHHHhccC----CC-eEEEcccCcccCCCCcCCCCccchHHHHhhcCCCC
Q 043601 107 TTANPVYTVSELSKQVKDSSPKLVVTVPELWERVKDFN----IP-AVLLGSNHIVSPRGLRSSSNIVYFDELIELSGNAS 181 (488)
Q Consensus 107 v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (488)
+|+++.++..++..+++.++++++++++.....+.... .. .+.+... ....+.+...... .
T Consensus 81 v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~--~ 146 (504)
T PRK07514 81 LPLNTAYTLAELDYFIGDAEPALVVCDPANFAWLSKIAAAAGAPHVETLDAD------------GTGSLLEAAAAAP--D 146 (504)
T ss_pred EECCCCCCHHHHHHHHHhCCCcEEEEccchhHHHHHhhhccCCceEEEecCC------------CcccHHHhhhhcC--c
Confidence 99999999999999999999999999987766554321 11 1111110 0011222211111 1
Q ss_pred CCCCCCCCCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHhhhhhhcCCCCcEEEEecchhhHHhHHHHHHHHhhCCc
Q 043601 182 NFPDVSVKQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTAMDQELAGALDYVTLCVLPMFHVFGLSFVVYAQLQKGN 261 (488)
Q Consensus 182 ~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~ 261 (488)
.........+++++|+|||||||.||+|.+||.++.... ..........+++++++.+|++|..++....+.++..|+
T Consensus 147 ~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~--~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~ 224 (504)
T PRK07514 147 DFETVPRGADDLAAILYTSGTTGRSKGAMLSHGNLLSNA--LTLVDYWRFTPDDVLIHALPIFHTHGLFVATNVALLAGA 224 (504)
T ss_pred ccCcccCCCCCeEEEEECCCCCCCCcEEEEecHHHHHHH--HHHHHHhCCCCccEEEEecchHHHHHHHHHHHHHHhcCc
Confidence 222344567899999999999999999999999998873 334455667889999999999999998778889999999
Q ss_pred eEEEcCCCCHHHHHHHHHhcCccEEEecHHHHHHHHhcCCccCCCCCCCccEEEEccCCCcHHHHHHHHhhCCCCeEEec
Q 043601 262 CVVSMRKFDLETALRAIEKYRVTHWWVVPPIILALAKNVSLVKKFDLSSLKGIGSGAAPLRKELVEECSKNLPTVTVFQG 341 (488)
Q Consensus 262 ~~~~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~i~~~ 341 (488)
++++.+..++..+++.+. ++|++.++|+++..++.. .......++++|.+++||+++++++.+.|.+.++ .++++.
T Consensus 225 ~~~~~~~~~~~~~~~~i~--~~t~~~~~P~~~~~l~~~-~~~~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~~-~~~~~~ 300 (504)
T PRK07514 225 SMIFLPKFDPDAVLALMP--RATVMMGVPTFYTRLLQE-PRLTREAAAHMRLFISGSAPLLAETHREFQERTG-HAILER 300 (504)
T ss_pred EEEECCCCCHHHHHHHHH--hheeeecHHHHHHHHHcC-CCCCcccccceeeEEecCCCCCHHHHHHHHHHhC-Ccceee
Confidence 999998889999999994 799999999999999876 4445567889999999999999999999999986 899999
Q ss_pred cCcccccccccccCCCCCCCCCCceeecCCCceEEEEeCCCCCCCCCCCcceEEEecC---------------------C
Q 043601 342 YGMTETCGVVTVENPLLGVQNSGSTGTLVAGVEAQIVCVDTLKPLPPNQVGELWVRGP---------------------I 400 (488)
Q Consensus 342 YG~tE~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~---------------------~ 400 (488)
||+||++....... .......++|.|++++.++++|++++++++.|+.|||+++|+ |
T Consensus 301 YG~tE~~~~~~~~~--~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~~g~~Gel~i~~~~~~~gy~~~~~~~~~~~~~~~~ 378 (504)
T PRK07514 301 YGMTETNMNTSNPY--DGERRAGTVGFPLPGVSLRVTDPETGAELPPGEIGMIEVKGPNVFKGYWRMPEKTAEEFRADGF 378 (504)
T ss_pred cccccccccccCCc--cccccCcccccCCCCcEEEEEECCCCCCCCCCCceEEEEecCCccccccCCchhhhhhcccCCC
Confidence 99999986544322 123456789999999999999988999999999999999885 5
Q ss_pred ccccceEEEccCCcEEEEcccCcceeeCcEEe---eHhHHHhcCCCeeeeEEEeecCCCCCceEEEEEEeCCCCCCCHHH
Q 043601 401 LMPGDLGYFDEHGQLFIVDRIKELIKCNGFQV---ELEGVLVSHPEILDAVVIPFPDPEAGEVPIAYVVRSPNSSLTKED 477 (488)
Q Consensus 401 ~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v---~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 477 (488)
|.|||+++++++|.+++.||++|+||.+|.+| +||.++.++++|.+++|++.++...++.++++++..++...+.++
T Consensus 379 ~~TGDl~~~~~~g~~~~~GR~~~~i~~~G~~i~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 458 (504)
T PRK07514 379 FITGDLGKIDERGYVHIVGRGKDLIISGGYNVYPKEVEGEIDELPGVVESAVIGVPHPDFGEGVTAVVVPKPGAALDEAA 458 (504)
T ss_pred eeecceEEEcCCccEEEeccccceEEeCCeEECHHHHHHHHHhCCCeeEEEEEeCCCCCcCceEEEEEEECCCCCCCHHH
Confidence 88999999999999999999999999999999 999999999999999999999888888999999998877778899
Q ss_pred HHHHHHhhcC
Q 043601 478 VQKFVANDSQ 487 (488)
Q Consensus 478 i~~~~~~~l~ 487 (488)
++++++++|+
T Consensus 459 l~~~~~~~l~ 468 (504)
T PRK07514 459 ILAALKGRLA 468 (504)
T ss_pred HHHHHHhhcc
Confidence 9999999875
No 50
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=100.00 E-value=1.1e-57 Score=472.05 Aligned_cols=453 Identities=18% Similarity=0.227 Sum_probs=351.3
Q ss_pred CCCCHHHHHhhccccCCCceEEEeCCC-C--cceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHH
Q 043601 25 PNLSMVHFLFRNSASYGSKSALIDADS-G--ESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQFPICLLGVIA 101 (488)
Q Consensus 25 ~~~~l~~~l~~~a~~~p~~~a~~~~~~-~--~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~ 101 (488)
...|+.+.+.++ .++++|++..+. + +.+||+||.++++++|+.|+++|+++||+|+++++|++++++++|||++
T Consensus 85 ~~~n~~~~~~~~---~~~~~a~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~~n~~e~~~~~lA~~~ 161 (652)
T TIGR01217 85 ARLNYAENLLRA---AGTEPALLYVDETHEPAPVTWAELRRQVASLAAALRALGVRPGDRVSGYLPNIPQAVVAMLATAS 161 (652)
T ss_pred CeeeHHHHHhcc---CCCCeEEEEECCCCCeeEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHH
Confidence 347788777664 468888876422 2 6899999999999999999999999999999999999999999999999
Q ss_pred cCCeEeecCCCCCHHHHHHHHhhcCCeEEEEccccH---------HHHhc----c-CCC-eEEEcccCcccCCCCcCCCC
Q 043601 102 IGGIATTANPVYTVSELSKQVKDSSPKLVVTVPELW---------ERVKD----F-NIP-AVLLGSNHIVSPRGLRSSSN 166 (488)
Q Consensus 102 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~---------~~~~~----~-~~~-~~~~~~~~~~~~~~~~~~~~ 166 (488)
+|++++|+++.++.+++.+++++++++++|+++... ..+.. . ..+ .+.+....... ........
T Consensus 162 ~Gav~vp~~~~~~~~~l~~~l~~~~~k~li~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~ 240 (652)
T TIGR01217 162 VGAIWSSCSPDFGARGVLDRFQQIEPKLLFTVDGYRYNGKEHDRRDKVAEVRKELPTLRAVVHIPYLGPRE-TEAPKIDG 240 (652)
T ss_pred hCeEEEecCCCCCHHHHHHHHHhcCCcEEEEccccccCCcccchHHHHHHHHhcCCCccEEEEEeCCCCcc-cccccccC
Confidence 999999999999999999999999999999987532 22211 1 112 22222110000 00001112
Q ss_pred ccchHHHHhhcCCCCCCCCCCCCCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHhhhhhhcCCCCcEEEEecchhhH
Q 043601 167 IVYFDELIELSGNASNFPDVSVKQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTAMDQELAGALDYVTLCVLPMFHV 246 (488)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (488)
...++++...... ..........+++++|+|||||||.||+|+++|.+++... .......+...++|++++..|+.|+
T Consensus 241 ~~~~~~~~~~~~~-~~~~~~~~~~~d~~~ilyTSGTTG~PKgV~~sh~~~~~~~-~~~~~~~~~~~~~d~~~~~~~~~~~ 318 (652)
T TIGR01217 241 ALDLEDFTAAAQA-AELVFEQLPFDHPLWILFSSGTTGLPKCIVHSAGGTLVQH-LKEHGLHCDLGPGDRLFYYTTTGWM 318 (652)
T ss_pred cccHHHHHhcccC-CCCCceecCCCCCEEEEEcCCCCCCCCeEEecccHHHHHH-HHHHHhccCCCCCcEEEEeCCcchh
Confidence 3346666543211 1222234567899999999999999999999999865431 1223334567788999999999997
Q ss_pred HhHHHHHHHHhhCCceEEEcCC----CCHHHHHHHHHhcCccEEEecHHHHHHHHhcC-CccCCCCCCCccEEEEccCCC
Q 043601 247 FGLSFVVYAQLQKGNCVVSMRK----FDLETALRAIEKYRVTHWWVVPPIILALAKNV-SLVKKFDLSSLKGIGSGAAPL 321 (488)
Q Consensus 247 ~~~~~~~~~~l~~G~~~~~~~~----~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~-~~~~~~~l~~lr~v~~~G~~l 321 (488)
.. ..++.++..|+++++.++ .++..+++.++++++|++..+|.++..+...- ......++++||.+++||+++
T Consensus 319 ~~--~~~~~~l~~G~t~vl~~g~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~l~sLr~i~~gGe~l 396 (652)
T TIGR01217 319 MW--NWLVSGLATGATLVLYDGSPGFPATNVLWDIAERTGATLFGTSAKYVMACRKAGVHPARTHDLSALQCVASTGSPL 396 (652)
T ss_pred hh--HHHHHHHhcCcEEEEECCCCCCCCchHHHHHHHHhCCeEEecCHHHHHHHHhcCCCccccCChhheeEEEeecCCC
Confidence 53 335688999999998853 36889999999999999988887777665431 112346789999999999999
Q ss_pred cHHHHHHHHhhCC-CCeEEeccCcccccccccccCCCCCCCCCCceeecCCCceEEEEeCCCCCCCCCCCcceEEEecCC
Q 043601 322 RKELVEECSKNLP-TVTVFQGYGMTETCGVVTVENPLLGVQNSGSTGTLVAGVEAQIVCVDTLKPLPPNQVGELWVRGPI 400 (488)
Q Consensus 322 ~~~~~~~~~~~~~-~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~~ 400 (488)
++++.+++.+.++ +..+.+.||+||++.......+. .....+++|.|.++++++++| ++|+++ .|+.|||+++|++
T Consensus 397 ~~~~~~~~~~~~~~~~~~~~~yG~TE~~~~~~~~~~~-~~~~~g~~g~p~~g~~v~ivd-~~g~~~-~g~~GEl~v~gp~ 473 (652)
T TIGR01217 397 PPDGFRWVYDEIKADVWLASISGGTDICSCFAGANPT-LPVHIGEIQAPGLGTAVQSWD-PEGKPV-TGEVGELVCTNPM 473 (652)
T ss_pred CHHHHHHHHHHhCCCceEEeccCHHHHhccccCCCCC-CCCcCCccCCCcCCCceEEEC-CCCCCC-CCCccEEEEecCC
Confidence 9999999999875 35677899999975333322221 133457889999999999999 578888 5999999999852
Q ss_pred ---------------------------ccccceEEEccCCcEEEEcccCcceeeCcEEe---eHhHHHhcCCCeeeeEEE
Q 043601 401 ---------------------------LMPGDLGYFDEHGQLFIVDRIKELIKCNGFQV---ELEGVLVSHPEILDAVVI 450 (488)
Q Consensus 401 ---------------------------~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v---~ie~~l~~~~~v~~~~v~ 450 (488)
++|||+|++|+||++++.||+||+||.+|++| |||++|.+||.|.|++|+
T Consensus 474 p~~~~gy~~~~~~t~~~~~~~~~~~g~~~tGDlg~~d~dG~l~i~GR~dd~I~~~G~ri~p~EIE~~l~~~p~V~eaavv 553 (652)
T TIGR01217 474 PSMPIRFWNDPDGSKYRDAYFDTYPGVWRHGDWITLTPRGGIVIHGRSDSTLNPQGVRMGSAEIYNAVERLDEVRESLCI 553 (652)
T ss_pred CccccceeCCCccchhHHhhhcCCCCEEEcCCcEEECCCCcEEEEecccCeEecCCEEcCHHHHHHHHHhCCCcceEEEE
Confidence 56799999999999999999999999999999 999999999999999999
Q ss_pred eecCCCCCceEEEEEEeCCCCCCCH---HHHHHHHHhhcCC
Q 043601 451 PFPDPEAGEVPIAYVVRSPNSSLTK---EDVQKFVANDSQL 488 (488)
Q Consensus 451 ~~~~~~~~~~~~~~v~~~~~~~~~~---~~i~~~~~~~l~~ 488 (488)
+.+++.+++.++++|+++++...+. ++|+++++++|+.
T Consensus 554 g~~~~~~ge~~~afVv~~~~~~~~~~~~~~l~~~~~~~l~~ 594 (652)
T TIGR01217 554 GQEQPDGGYRVVLFVHLAPGATLDDALLDRIKRTIRAGLSP 594 (652)
T ss_pred eeecCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHhhCCC
Confidence 9999999999999999998766554 5899999888763
No 51
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=100.00 E-value=2e-57 Score=461.64 Aligned_cols=440 Identities=22% Similarity=0.298 Sum_probs=364.1
Q ss_pred CCHHHHHhhccccCCCceEEEeCCCCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHHcCCeE
Q 043601 27 LSMVHFLFRNSASYGSKSALIDADSGESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQFPICLLGVIAIGGIA 106 (488)
Q Consensus 27 ~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~ 106 (488)
.|+.+.|.++++.+|+++|+++. ++++||+||.++++++|..|.+.|+++|++|+++++|++++++++|||+++|+++
T Consensus 23 ~~l~~~~~~~a~~~p~~~a~~~~--~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~la~~~~G~~~ 100 (527)
T TIGR02275 23 KPLTDILRDQAARYPDAIAIICG--NRQWSYRELDQRADNLAAGLTKLGIGQGDTAVVQLPNIAEFYIVFFALLKLGIAP 100 (527)
T ss_pred CcHHHHHHHHHHHCCCceEEEeC--CceecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHcCeEE
Confidence 68999999999999999999987 7899999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCHHHHHHHHhhcCCeEEEEccccHH--------HHhcc--CCCeEEEcccCcccCCCCcCCCCccchHHHHhh
Q 043601 107 TTANPVYTVSELSKQVKDSSPKLVVTVPELWE--------RVKDF--NIPAVLLGSNHIVSPRGLRSSSNIVYFDELIEL 176 (488)
Q Consensus 107 v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~--------~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (488)
+++++..+.+++.++++.++++.++++..... .+... ....+.+.... .........+..
T Consensus 101 v~~~~~~~~~~~~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~ 170 (527)
T TIGR02275 101 VLALFSHRKSELTAYAQQIEPALYIIDRAHSLFDYDAFARQLQSKLPTLRNIIVAGQT----------RVEAELFLWLES 170 (527)
T ss_pred eccccccCHHHHHHHHHhcCCcEEEEcCcccccchHHHHHHHHhhCCcceEEEEecCC----------CCcchhhHHhhC
Confidence 99999999999999999999999999865311 11111 11122221110 000011111111
Q ss_pred cCCCCCCCCCCCCCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHhhhhhhcCCCCcEEEEecchhhHHhHHH-HHHH
Q 043601 177 SGNASNFPDVSVKQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTAMDQELAGALDYVTLCVLPMFHVFGLSF-VVYA 255 (488)
Q Consensus 177 ~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 255 (488)
.. .........++++++++|||||||.||+|++||.++... ............+++++..+|++|.+++.. .++.
T Consensus 171 ~~--~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~--~~~~~~~~~~~~~d~~l~~~P~~h~~~~~~~~~~~ 246 (527)
T TIGR02275 171 PA--EPVKFPPTKSDEVAFFQLSGGSTGTPKLIPRTHNDYYYS--VRRSVEICWLTQQTRYLCALPAAHNYPLSSPGALG 246 (527)
T ss_pred cC--ccccCCCCCCCccEEEEeCCCCCCCCceeeeehHHHHHH--HHHHHhhcCCCcCCEEEECCChHhhhhhhHHHHHH
Confidence 11 112223456789999999999999999999999999876 333445566778899999999999998854 4788
Q ss_pred HhhCCceEEEcCCCCHHHHHHHHHhcCccEEEecHHHHHHHHhcCCccCCCCCCCccEEEEccCCCcHHHHHHHHhhCCC
Q 043601 256 QLQKGNCVVSMRKFDLETALRAIEKYRVTHWWVVPPIILALAKNVSLVKKFDLSSLKGIGSGAAPLRKELVEECSKNLPT 335 (488)
Q Consensus 256 ~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~ 335 (488)
++..|+++++.+.+++..+++.+++++++++.++|+++..+++. ......+++++|.+++||+++++++.+++.+.++
T Consensus 247 ~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~-~~~~~~~~~~lr~~~~gG~~l~~~~~~~~~~~~g- 324 (527)
T TIGR02275 247 VFYAGGCVVLAPDPSPTDCFPLIERHKVTVTALVPPAVALWMQA-ASKSRYDLSSLKLLQVGGAKFSEAAARRVPAVFG- 324 (527)
T ss_pred HHhcCCeEEECCCCCHHHHHHHHHHhCCeEEEecHHHHHHHHhC-ccccCCCccceEEEEEcCCCCCHHHHHHHHHHhC-
Confidence 89999999998888999999999999999999999999999887 4445567889999999999999999999999886
Q ss_pred CeEEeccCcccccccccccCCCCCCCCCCceeecC-CCceEEEEeCCCCCCCCCCCcceEEEecC---------------
Q 043601 336 VTVFQGYGMTETCGVVTVENPLLGVQNSGSTGTLV-AGVEAQIVCVDTLKPLPPNQVGELWVRGP--------------- 399 (488)
Q Consensus 336 ~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~i~d~~~~~~~~~g~~Gel~v~g~--------------- 399 (488)
.++++.||+||++..... ..........++|+|+ ++..++++| +++++++.|+.|||+++|+
T Consensus 325 ~~~~~~YG~tE~~~~~~~-~~~~~~~~~~~~G~~~~~~~~v~i~d-~~g~~~~~g~~Gei~v~g~~~~~gY~~~~~~~~~ 402 (527)
T TIGR02275 325 CQLQQVFGMAEGLVNYTR-LDDPAEIIFTTQGRPMSPDDEVRVVD-DHGNPVAPGETGMLLTRGPYTFRGYYKAPEHNAA 402 (527)
T ss_pred CeEEeeeccCccCccccC-CCCccccccccCCCCCCCCceEEEEC-CCCCCCCCCCceEEEecCCccchhhcCChhHhHh
Confidence 899999999996533322 1111233456789999 488999999 6789999999999999874
Q ss_pred ------CccccceEEEccCCcEEEEcccCcceeeCcEEe---eHhHHHhcCCCeeeeEEEeecCCCCCceEEEEEEeCCC
Q 043601 400 ------ILMPGDLGYFDEHGQLFIVDRIKELIKCNGFQV---ELEGVLVSHPEILDAVVIPFPDPEAGEVPIAYVVRSPN 470 (488)
Q Consensus 400 ------~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v---~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~ 470 (488)
|++|||+|+++++|++++.||.+|+|+.+|.+| +||+++.++|+|.+++|++.++...++.++++|+.+++
T Consensus 403 ~~~~dg~~~TGDl~~~~~~g~l~~~gR~~d~i~~~G~~v~~~eiE~~l~~~~~v~~~~v~~~~~~~~~~~~~a~vv~~~~ 482 (527)
T TIGR02275 403 AFDAEGFYYTGDLVRLTPEGYIVVVGRAKDQINRGGEKIAAEEIENLLLAHPAVHDAALVSMPDELLGEKSCAFIVVRDP 482 (527)
T ss_pred hcCcCCCEEcCceEEEcCCccEEEEecccceeecCCEEECHHHHHHHHHhCCCceEEEEEecCCcccccEEEEEEEECCC
Confidence 689999999999999999999999999999999 99999999999999999999998888999999998765
Q ss_pred CCCCHHHHHHHHHhh-cC
Q 043601 471 SSLTKEDVQKFVAND-SQ 487 (488)
Q Consensus 471 ~~~~~~~i~~~~~~~-l~ 487 (488)
..+.++|+++++++ ++
T Consensus 483 -~~~~~~l~~~l~~~~l~ 499 (527)
T TIGR02275 483 -ALKAAQLRRFLRERGLA 499 (527)
T ss_pred -CCCHHHHHHHHHhCCCc
Confidence 46889999999875 54
No 52
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]
Probab=100.00 E-value=3.2e-58 Score=452.03 Aligned_cols=417 Identities=29% Similarity=0.375 Sum_probs=333.4
Q ss_pred CCCHHHHHhhccccCCCceEEEeCCCC--cceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHHcC
Q 043601 26 NLSMVHFLFRNSASYGSKSALIDADSG--ESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQFPICLLGVIAIG 103 (488)
Q Consensus 26 ~~~l~~~l~~~a~~~p~~~a~~~~~~~--~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G 103 (488)
..++...+.++++.+|+.+++.+...+ +.+||+|+.+++.++|++|+..|+..||+|+|++.|+++|+++.+||+.+|
T Consensus 15 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ty~e~~~~v~~~a~gL~~lg~~~gdrvai~a~nr~eW~i~d~a~~~~g 94 (613)
T COG1022 15 IHTLPKRLAERVKDRPDGVALMYKELGGWEAITYRELYERVRALASGLLSLGIPAGDRVAIFAANRPEWAIADLAILALG 94 (613)
T ss_pred cccHHHHHHHHhhcCCcceeEeeecCCcceEeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeCCCHHHHHHHHHHHHcC
Confidence 368999999999999999999865433 789999999999999999999999779999999999999999999999999
Q ss_pred CeEeecCCCCCHHHHHHHHhhcCCeEEEEccccHHHH-hccCCCe-EEEccc-------CcccCCCC--cC--CCCccch
Q 043601 104 GIATTANPVYTVSELSKQVKDSSPKLVVTVPELWERV-KDFNIPA-VLLGSN-------HIVSPRGL--RS--SSNIVYF 170 (488)
Q Consensus 104 ~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~-~~~~~~~-~~~~~~-------~~~~~~~~--~~--~~~~~~~ 170 (488)
++.||+.++.+.+++.+++++++++++|++....... ....... .+.... ........ .. ..+...+
T Consensus 95 ~v~Vp~y~t~~~~~~~~iL~~se~~~i~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (613)
T COG1022 95 AVSVPIYSTSTPEQLAYILNESESKVIFVENQELLDLVLPVLEDCPKVVDLIVIIDLVREAVEAKALVLEVFPDEGISLF 174 (613)
T ss_pred CeEEecCCCCCHHHHHHHHhcCCceEEEecchHHHHHHHhhhccccchhhhhhhhhhhhhccchhhccccccccccchhh
Confidence 9999999999999999999999999999998544433 2221100 000000 00000000 00 0000001
Q ss_pred HHHHhhcCCCCCCCCCCCCCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHhhhhhhc-CCCCcEEEEecchhhHHhH
Q 043601 171 DELIELSGNASNFPDVSVKQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTAMDQELA-GALDYVTLCVLPMFHVFGL 249 (488)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 249 (488)
...... .........++|+|.|+|||||||.||||++||+|++++ ......... ..++|+.++.+|+.|++..
T Consensus 175 --~~~~~~--~~~~~~~~~~dDlatiiYTSGTTG~PKGVmLth~N~~~~--v~~~~~~~~~~~~~d~~LsfLPlaHi~Er 248 (613)
T COG1022 175 --LIDSAG--LEGRIAPPKPDDLATIIYTSGTTGTPKGVMLTHRNLLAQ--VAGIDEVLPPIGPGDRVLSFLPLAHIFER 248 (613)
T ss_pred --hhcccc--cccccCCCCccceEEEEEcCCCCCCCceEEEehHHHHHH--HHHHHhhCCCCCCCcEEEEeCcHHHHHHH
Confidence 011111 111224678999999999999999999999999999998 444666664 7899999999999999999
Q ss_pred HHHHHHHhhCCceEEEcCCCCHHHHHHHHHhcCccEEEecHHHHHHHHhcCCc---------------------------
Q 043601 250 SFVVYAQLQKGNCVVSMRKFDLETALRAIEKYRVTHWWVVPPIILALAKNVSL--------------------------- 302 (488)
Q Consensus 250 ~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~--------------------------- 302 (488)
.+.....+..|++... ..++..+++.+++++||+++++|.+|+.+.+....
T Consensus 249 ~~~~~~~~~~g~~~~~--~~~~~~~~~dl~~~rPt~m~~VPRvwE~i~~~I~~kv~~~~~~~~~if~~a~~~~~~~~~~~ 326 (613)
T COG1022 249 AFEGGLALYGGVTVLF--KEDPRTLLEDLKEVRPTVMIGVPRVWEKVYKGIMEKVAKAPAVRRKLFRWALKVAYKKISRA 326 (613)
T ss_pred HHHHHHHhhcceEEEe--cCCHHHHHHHHHHhCCeEEeechHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhh
Confidence 6555555555555544 45699999999999999999999999977544200
Q ss_pred --c------------------CCCCCCCccEEEEccCCCcHHHHHHHHhhCCCCeEEeccCcccccccccccCCCCCCCC
Q 043601 303 --V------------------KKFDLSSLKGIGSGAAPLRKELVEECSKNLPTVTVFQGYGMTETCGVVTVENPLLGVQN 362 (488)
Q Consensus 303 --~------------------~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~ 362 (488)
. ....-.++|.+++||+++++++...++.. ++++.+.||+||+++.++.+++. ...
T Consensus 327 ~~~~~~~~~~~~~d~LVf~Kir~~lGgri~~~~sGGa~l~~~~~~f~~~l--Gi~i~eGYGlTEts~~~~v~~~~--~~~ 402 (613)
T COG1022 327 LLGGGPLSWLLVADRLVFRKIRDALGGRIRYALSGGAPLSPELLHFFRSL--GIPILEGYGLTETSAVVSVNPPD--RFV 402 (613)
T ss_pred hcccCCcchhhhhhHHHHHHHHHHhCCcEEEEEecCCcCCHHHHHHHHHc--CCCeEEEecccccccceEEcccc--Ccc
Confidence 0 00111489999999999999999999887 69999999999999999988776 678
Q ss_pred CCceeecCCCceEEEEeCCCCCCCCCCCcceEEEecC---------------------CccccceEEEccCCcEEEEccc
Q 043601 363 SGSTGTLVAGVEAQIVCVDTLKPLPPNQVGELWVRGP---------------------ILMPGDLGYFDEHGQLFIVDRI 421 (488)
Q Consensus 363 ~~~~g~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~---------------------~~~tGD~~~~~~~g~l~~~GR~ 421 (488)
.+++|+|+|+++++|+|. |||+|+|+ |++|||+|.++++|+|.+.||+
T Consensus 403 ~gtvG~p~p~~evKI~d~-----------GEilVRG~~Vm~GYyk~pe~Taeaf~~DGWf~TGDlg~~d~~g~L~i~gRk 471 (613)
T COG1022 403 LGTVGKPLPGIEVKIADD-----------GEILVRGPNVMKGYYKNPEATAEAFTEDGWFRTGDLGELDEDGYLVITGRK 471 (613)
T ss_pred cCCcCCcCCCceEEEccC-----------ceEEEecchhcchhcCChHHHhhhccccCCcccCceeEEcCCCcEEEeecc
Confidence 899999999999999984 99999996 8999999999999999999999
Q ss_pred Ccceee-CcEEe---eHhHHHhcCCCeeeeEEEeecCCCCCceEEEEEEeCC
Q 043601 422 KELIKC-NGFQV---ELEGVLVSHPEILDAVVIPFPDPEAGEVPIAYVVRSP 469 (488)
Q Consensus 422 ~d~i~~-~G~~v---~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~ 469 (488)
+|+|+. +|++| .||+.+.++|.|.+++|++..+. .+.|+|++..
T Consensus 472 K~~i~l~~GknIaP~~IE~~l~~~~~I~qi~vvg~~k~----~~~AlIvp~~ 519 (613)
T COG1022 472 KELIKLSNGKNIAPEPIESKLAKSPLIEQICVVGDDKK----FLVALIVPDF 519 (613)
T ss_pred cceEECCCCcccChHHHHHHHhcCCCeeEEEEEecCCc----ceEEEEeCCH
Confidence 999999 89999 99999999999999999984333 7889998754
No 53
>PRK07470 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.2e-57 Score=461.95 Aligned_cols=444 Identities=25% Similarity=0.376 Sum_probs=366.0
Q ss_pred CCCHHHHHhhccccCCCceEEEeCCCCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHHcCCe
Q 043601 26 NLSMVHFLFRNSASYGSKSALIDADSGESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQFPICLLGVIAIGGI 105 (488)
Q Consensus 26 ~~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~ 105 (488)
.+|+.+++.+.++++|+++|+.+. ++.+||+||+++++++|..|++.|+++|++|+++++|+++++++++||+++|++
T Consensus 6 ~~~~~~~~~~~a~~~p~~~a~~~~--~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~v~i~~~~~~~~~~~~lA~~~~G~~ 83 (528)
T PRK07470 6 VMNLAHFLRQAARRFPDRIALVWG--DRSWTWREIDARVDALAAALAARGVRKGDRILVHSRNCNQMFESMFAAFRLGAV 83 (528)
T ss_pred CCCHHHHHHHHHHHCCCceEEEEC--CccccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHhCCeE
Confidence 378999999999999999999986 789999999999999999999999999999999999999999999999999999
Q ss_pred EeecCCCCCHHHHHHHHhhcCCeEEEEccccHHHHhccC-----CCeEEEcccCcccCCCCcCCCCccchHHHHhhcCCC
Q 043601 106 ATTANPVYTVSELSKQVKDSSPKLVVTVPELWERVKDFN-----IPAVLLGSNHIVSPRGLRSSSNIVYFDELIELSGNA 180 (488)
Q Consensus 106 ~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (488)
++|+++.++.+++..+++.++++.++++++....+.... ...++.... .....++++++.....
T Consensus 84 ~v~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~- 152 (528)
T PRK07470 84 WVPTNFRQTPDEVAYLAEASGARAMICHADFPEHAAAVRAASPDLTHVVAIGG----------ARAGLDYEALVARHLG- 152 (528)
T ss_pred EEecCccCCHHHHHHHHHhcCceEEEEcchhHHHHHHHHhhCCcCceEEEeCC----------CcccccHHHHHhcCCC-
Confidence 999999999999999999999999999987655443221 111111110 0112245555433211
Q ss_pred CCCCCCCCCCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHhhhhhhcCCCCcEEEEecchhhHHhHHHHHHHHhhCC
Q 043601 181 SNFPDVSVKQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTAMDQELAGALDYVTLCVLPMFHVFGLSFVVYAQLQKG 260 (488)
Q Consensus 181 ~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G 260 (488)
.........++++++|+|||||||.||+|+++|.++................+.++++...|++|..++ ..++ .+..|
T Consensus 153 ~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~-~~~~-~~~~g 230 (528)
T PRK07470 153 ARVANAAVDHDDPCWFFFTSGTTGRPKAAVLTHGQMAFVITNHLADLMPGTTEQDASLVVAPLSHGAGI-HQLC-QVARG 230 (528)
T ss_pred CCCCcccCCCCCeEEEEeCCCCCCCCcEEEEehhhHHHHHHHHHHHhccCCCcccEEEEeccchhHHHH-HHHH-HHhcC
Confidence 112233456789999999999999999999999998654222111111134678899999999999888 4444 46667
Q ss_pred ceEEEcC--CCCHHHHHHHHHhcCccEEEecHHHHHHHHhcCCccCCCCCCCccEEEEccCCCcHHHHHHHHhhCCCCeE
Q 043601 261 NCVVSMR--KFDLETALRAIEKYRVTHWWVVPPIILALAKNVSLVKKFDLSSLKGIGSGAAPLRKELVEECSKNLPTVTV 338 (488)
Q Consensus 261 ~~~~~~~--~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~i 338 (488)
++.++.+ .+++..+++.++++++|++.++|+++..+.+. ......+++++|.+++||+++++...+++.+.++ ..+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~-~~~~~~~~~~lr~~~~gG~~l~~~~~~~~~~~~g-~~~ 308 (528)
T PRK07470 231 AATVLLPSERFDPAEVWALVERHRVTNLFTVPTILKMLVEH-PAVDRYDHSSLRYVIYAGAPMYRADQKRALAKLG-KVL 308 (528)
T ss_pred ceEEEecccCcCHHHHHHHHHhcCCeEEechHHHHHHHHhC-cCcCCCCCcceEEEEEcCCCCCHHHHHHHHHHhC-cHH
Confidence 7766554 47899999999999999999999999999886 4445567889999999999999999999999887 889
Q ss_pred EeccCcccccccccccCCC------CCCCCCCceeecCCCceEEEEeCCCCCCCCCCCcceEEEecC-------------
Q 043601 339 FQGYGMTETCGVVTVENPL------LGVQNSGSTGTLVAGVEAQIVCVDTLKPLPPNQVGELWVRGP------------- 399 (488)
Q Consensus 339 ~~~YG~tE~~~~~~~~~~~------~~~~~~~~~g~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~------------- 399 (488)
++.||+||+++.++..... ......+++|.|++++.++++| +++++++.|+.|||+++|+
T Consensus 309 ~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~d-~~~~~~~~g~~Gel~i~~~~~~~gy~~~~~~~ 387 (528)
T PRK07470 309 VQYFGLGEVTGNITVLPPALHDAEDGPDARIGTCGFERTGMEVQIQD-DEGRELPPGETGEICVIGPAVFAGYYNNPEAN 387 (528)
T ss_pred HHhCCCcccCCceeecchhhccccccccceeeccCcccCCcEEEEEC-CCCCCCCCCCceEEEEeCCccchhhcCCHHHH
Confidence 9999999998765543221 0123456889999999999999 5889999999999999985
Q ss_pred -------CccccceEEEccCCcEEEEcccCcceeeCcEEe---eHhHHHhcCCCeeeeEEEeecCCCCCceEEEEEEeCC
Q 043601 400 -------ILMPGDLGYFDEHGQLFIVDRIKELIKCNGFQV---ELEGVLVSHPEILDAVVIPFPDPEAGEVPIAYVVRSP 469 (488)
Q Consensus 400 -------~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v---~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~ 469 (488)
||+|||+++++++|++++.||.||++|++|.+| +||.++.+++.|.+++|++.+++..++.++++++.++
T Consensus 388 ~~~~~~~~~~TGDl~~~~~~g~l~~~GR~dd~i~~~G~~v~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~~~~~~ 467 (528)
T PRK07470 388 AKAFRDGWFRTGDLGHLDARGFLYITGRASDMYISGGSNVYPREIEEKLLTHPAVSEVAVLGVPDPVWGEVGVAVCVARD 467 (528)
T ss_pred HhhhcCCcEecceeEEEccCCeEEEeCCccceEEeCCEEECHHHHHHHHHhCCCceEEEEEeccCcccCceeEEEEEECC
Confidence 689999999999999999999999999999999 9999999999999999999999888888999999888
Q ss_pred CCCCCHHHHHHHHHhhcC
Q 043601 470 NSSLTKEDVQKFVANDSQ 487 (488)
Q Consensus 470 ~~~~~~~~i~~~~~~~l~ 487 (488)
+...+.++++++++++|+
T Consensus 468 ~~~~~~~~~~~~l~~~l~ 485 (528)
T PRK07470 468 GAPVDEAELLAWLDGKVA 485 (528)
T ss_pred CCCCCHHHHHHHHHHhhh
Confidence 766888999999998875
No 54
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=100.00 E-value=4.1e-57 Score=461.76 Aligned_cols=442 Identities=26% Similarity=0.367 Sum_probs=366.1
Q ss_pred CCHHHHHhhccccCCCceEEEeCCCCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHHcCCeE
Q 043601 27 LSMVHFLFRNSASYGSKSALIDADSGESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQFPICLLGVIAIGGIA 106 (488)
Q Consensus 27 ~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~ 106 (488)
.|+.++|+++++.+|+++|+++.+ ++.+||+||+++++++|++|++.|+++||+|+++++|++++++++|||+++|+++
T Consensus 23 ~~l~~~~~~~~~~~pd~~a~~~~~-~~~~Ty~~l~~~v~~la~~l~~~G~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~ 101 (547)
T PRK06087 23 ASLADYWQQTARAMPDKIAVVDNH-GASYTYSALDHAASRLANWLLAKGIEPGDRVAFQLPGWCEFTIIYLACLKVGAVS 101 (547)
T ss_pred CCHHHHHHHHHHHCCCceEEEcCC-CCEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCcEE
Confidence 579999999999999999998753 4799999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCHHHHHHHHhhcCCeEEEEcccc-----HHHHhc----c-CCCeEEEcccCcccCCCCcCCCCccchHHHHhh
Q 043601 107 TTANPVYTVSELSKQVKDSSPKLVVTVPEL-----WERVKD----F-NIPAVLLGSNHIVSPRGLRSSSNIVYFDELIEL 176 (488)
Q Consensus 107 v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~-----~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (488)
+|+++.++.+++..+++.+++++++++... .+.+.. . ....+....... .......+.+++..
T Consensus 102 v~l~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~ 174 (547)
T PRK06087 102 VPLLPSWREAELVWVLNKCQAKMFFAPTLFKQTRPVDLILPLQNQLPQLQQIVGVDKLA-------PATSSLSLSQIIAD 174 (547)
T ss_pred eccchhcCHHHHHHHHHhcCCeEEEEecccccccHHHHHHHHHhhCCCCcEEEEeCCcC-------CCcCccCHHHHhcc
Confidence 999999999999999999999999997532 111111 1 111222211100 00111234444433
Q ss_pred cCCCCCCCCCCCCCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHhhhhhhcCCCCcEEEEecchhhHHhHHHHHHHH
Q 043601 177 SGNASNFPDVSVKQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTAMDQELAGALDYVTLCVLPMFHVFGLSFVVYAQ 256 (488)
Q Consensus 177 ~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (488)
.. ..........+++++|+|||||||.||+|++||.++..... .........+++++++..|++|.+++...++.+
T Consensus 175 ~~--~~~~~~~~~~~d~a~i~~TSGTTG~PK~v~~t~~~l~~~~~--~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~~ 250 (547)
T PRK06087 175 YE--PLTTAITTHGDELAAVLFTSGTEGLPKGVMLTHNNILASER--AYCARLNLTWQDVFMMPAPLGHATGFLHGVTAP 250 (547)
T ss_pred CC--cccCCCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHH--HHHHhcCCCCCCeEEEecchHHHHHHHHHHHHH
Confidence 22 11122345678999999999999999999999999987633 344555678899999999999999987888999
Q ss_pred hhCCceEEEcCCCCHHHHHHHHHhcCccEEEecHHHHHHHHhcCCccCCCCCCCccEEEEccCCCcHHHHHHHHhhCCCC
Q 043601 257 LQKGNCVVSMRKFDLETALRAIEKYRVTHWWVVPPIILALAKNVSLVKKFDLSSLKGIGSGAAPLRKELVEECSKNLPTV 336 (488)
Q Consensus 257 l~~G~~~~~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~ 336 (488)
+..|+++++.+.+++..+++.++++++++++++|+++..+++. ......+++++|.+++||+++++++.+.+.+. ++
T Consensus 251 l~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~~~l~~-~~~~~~~~~~lr~i~~gG~~~~~~~~~~~~~~--~~ 327 (547)
T PRK06087 251 FLIGARSVLLDIFTPDACLALLEQQRCTCMLGATPFIYDLLNL-LEKQPADLSALRFFLCGGTTIPKKVARECQQR--GI 327 (547)
T ss_pred HhcCCEEEecCCCCHHHHHHHHHHcCCCEEeccHHHHHHHHhc-cccCCCCCCCeEEEEEcCCCCCHHHHHHHHHc--CC
Confidence 9999999999999999999999999999999998888888776 33445678899999999999999999998875 59
Q ss_pred eEEeccCcccccccccccCCCCCCCCCCceeecCCCceEEEEeCCCCCCCCCCCcceEEEecC-----------------
Q 043601 337 TVFQGYGMTETCGVVTVENPLLGVQNSGSTGTLVAGVEAQIVCVDTLKPLPPNQVGELWVRGP----------------- 399 (488)
Q Consensus 337 ~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~----------------- 399 (488)
++++.||+||++.+..............++|+|++++.++++| +++++++.|+.|||+++|+
T Consensus 328 ~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d-~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~ 406 (547)
T PRK06087 328 KLLSVYGSTESSPHAVVNLDDPLSRFMHTDGYAAAGVEIKVVD-EARKTLPPGCEGEEASRGPNVFMGYLDEPELTARAL 406 (547)
T ss_pred cEEEEecccccCCccccCCCcchhhcCCcCCccCCCceEEEEc-CCCCCCcCCCcceEEEecccccccccCCHHHHHHHh
Confidence 9999999999987665443322223456789999999999999 6889999999999999874
Q ss_pred ----CccccceEEEccCCcEEEEcccCcceeeCcEEe---eHhHHHhcCCCeeeeEEEeecCCCCCceEEEEEEeCC-CC
Q 043601 400 ----ILMPGDLGYFDEHGQLFIVDRIKELIKCNGFQV---ELEGVLVSHPEILDAVVIPFPDPEAGEVPIAYVVRSP-NS 471 (488)
Q Consensus 400 ----~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v---~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~-~~ 471 (488)
||.|||+++++++|++++.||.+|+|+.+|.+| +||+++.++++|.+++|++.+++..++.++++|+..+ +.
T Consensus 407 ~~~g~~~TGDl~~~~~~g~l~i~GR~~d~i~~~G~~v~p~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~ 486 (547)
T PRK06087 407 DEEGWYYSGDLCRMDEAGYIKITGRKKDIIVRGGENISSREVEDILLQHPKIHDACVVAMPDERLGERSCAYVVLKAPHH 486 (547)
T ss_pred CCCCCcCcCceEEECCCCCEEEEecchhhhhcCCEEECHHHHHHHHHhCCCeeEEEEEecCCCCcCceEEEEEEECCCCC
Confidence 688999999999999999999999999999999 9999999999999999999998888899999999876 45
Q ss_pred CCCHHHHHHHHHh
Q 043601 472 SLTKEDVQKFVAN 484 (488)
Q Consensus 472 ~~~~~~i~~~~~~ 484 (488)
..+.+++.+++.+
T Consensus 487 ~~~~~~~~~~~~~ 499 (547)
T PRK06087 487 SLTLEEVVAFFSR 499 (547)
T ss_pred CCCHHHHHHHHHh
Confidence 6678888888753
No 55
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=100.00 E-value=1e-57 Score=474.52 Aligned_cols=433 Identities=23% Similarity=0.283 Sum_probs=335.3
Q ss_pred CCHHHHHhhccccCCCceEEEeC----------CCC-----------cceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEE
Q 043601 27 LSMVHFLFRNSASYGSKSALIDA----------DSG-----------ESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIF 85 (488)
Q Consensus 27 ~~l~~~l~~~a~~~p~~~a~~~~----------~~~-----------~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~ 85 (488)
.|+.++|.++++.+|+++|+.+. .++ +++||+||+++++++|++|.++|+++||+|+|+
T Consensus 58 ~t~~~l~~~~~~~~pd~~al~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~lG~~~gd~Vai~ 137 (696)
T PLN02387 58 TTLAALFEQSCKKYSDKRLLGTRKLISREFETSSDGRKFEKLHLGEYEWITYGQVFERVCNFASGLVALGHNKEERVAIF 137 (696)
T ss_pred CCHHHHHHHHHHHCCCCceEEEecccccccccccCCcccccccCCCcEEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEE
Confidence 68999999999999999999431 012 348999999999999999999999999999999
Q ss_pred cCCCcchHHHHHHHHHcCCeEeecCCCCCHHHHHHHHhhcCCeEEEEccccHHHHhccC-----CCeEEEcccCccc-CC
Q 043601 86 APNSIQFPICLLGVIAIGGIATTANPVYTVSELSKQVKDSSPKLVVTVPELWERVKDFN-----IPAVLLGSNHIVS-PR 159 (488)
Q Consensus 86 ~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~-----~~~~~~~~~~~~~-~~ 159 (488)
++|+++|++++|||+++|+++||+++.++.+++.++++.++++++|++.+....+.... .+.++...+.... ..
T Consensus 138 ~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~li~~~~~~~~l~~~~~~~~~l~~ii~~~~~~~~~~~ 217 (696)
T PLN02387 138 ADTRAEWLIALQGCFRQNITVVTIYASLGEEALCHSLNETEVTTVICDSKQLKKLIDISSQLETVKRVIYMDDEGVDSDS 217 (696)
T ss_pred cCCCHHHHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHccCCCEEEECHHHHHHHHHHhhccCCceEEEEECCCCchhhh
Confidence 99999999999999999999999999999999999999999999999987766654431 2222222111100 00
Q ss_pred --CCcCCCCccchHHHHhhcCCCCCCCCCCCCCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHhhhhh-hcCCCCcE
Q 043601 160 --GLRSSSNIVYFDELIELSGNASNFPDVSVKQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTAMDQE-LAGALDYV 236 (488)
Q Consensus 160 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~-~~~~~~~~ 236 (488)
.......+.+++++...+.. .........++++++|+|||||||.||||++||+++...... .... ....++|+
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~dd~a~I~yTSGTTG~PKGV~lth~~l~~~~~~--~~~~~~~~~~~d~ 294 (696)
T PLN02387 218 SLSGSSNWTVSSFSEVEKLGKE-NPVDPDLPSPNDIAVIMYTSGSTGLPKGVMMTHGNIVATVAG--VMTVVPKLGKNDV 294 (696)
T ss_pred hhhccCCcEEEEHHHHHHhhcc-CCCCCCCCCccceEEEEecCCCCCCCCEEEEEcHHHHHHHHH--HHhhcCCCCCCCE
Confidence 00111233456766654432 111223346899999999999999999999999999876332 2222 24678899
Q ss_pred EEEecchhhHHhHHHHHHHHhhCCceEEEcCCCC--------HHHHHHHHHhcCccEEEecHHHHHHHHhcCCcc-----
Q 043601 237 TLCVLPMFHVFGLSFVVYAQLQKGNCVVSMRKFD--------LETALRAIEKYRVTHWWVVPPIILALAKNVSLV----- 303 (488)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~~~~~--------~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~----- 303 (488)
+++.+|++|.+++. ..+..+..|+++.+..... +..++..+++++||+++++|.+++.+.+.....
T Consensus 295 ~l~~lPl~Hi~~~~-~~~~~~~~g~~i~~g~~~~l~~~~~~~~~~~~~~i~~~~pT~~~~vP~~l~~l~~~~~~~~~~~~ 373 (696)
T PLN02387 295 YLAYLPLAHILELA-AESVMAAVGAAIGYGSPLTLTDTSNKIKKGTKGDASALKPTLMTAVPAILDRVRDGVRKKVDAKG 373 (696)
T ss_pred EEEECcHHHHHHHH-HHHHHHHhCCEEEECChhhhcccccccccCchhhHHHhCCcEEEehhHHHHHHHHHHHHHHhccc
Confidence 99999999999984 4444567777776643321 234567899999999999999999887531000
Q ss_pred ------------------C-------C----------------CCCCCccEEEEccCCCcHHHHHHHHhhCCCCeEEecc
Q 043601 304 ------------------K-------K----------------FDLSSLKGIGSGAAPLRKELVEECSKNLPTVTVFQGY 342 (488)
Q Consensus 304 ------------------~-------~----------------~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~i~~~Y 342 (488)
. . ...+++|.+++||+++++++.+.+...++ +.+++.|
T Consensus 374 ~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~i~~GGapl~~~~~~~~~~~~g-~~v~~~Y 452 (696)
T PLN02387 374 GLAKKLFDIAYKRRLAAIEGSWFGAWGLEKLLWDALVFKKIRAVLGGRIRFMLSGGAPLSGDTQRFINICLG-APIGQGY 452 (696)
T ss_pred HHHHHHHHHHHHHHHHHhccCCcccccccchhhHHHHHHHHHHHhCCcEEEEEEcCCCCCHHHHHHHHHHcC-CCeeEee
Confidence 0 0 00158999999999999999988887786 8999999
Q ss_pred CcccccccccccCCCCCCCCCCceeecCCCceEEEEeCCCC-CCC--CCCCcceEEEecC--------------------
Q 043601 343 GMTETCGVVTVENPLLGVQNSGSTGTLVAGVEAQIVCVDTL-KPL--PPNQVGELWVRGP-------------------- 399 (488)
Q Consensus 343 G~tE~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d~~~~-~~~--~~g~~Gel~v~g~-------------------- 399 (488)
|+||+++.++..... ....+++|+|+|+++++|+|.+++ ..+ .++..|||+|+|+
T Consensus 453 G~TEt~~~~~~~~~~--~~~~gsvG~p~p~~evkivd~~~~~~~~~~~~~p~GEi~vrGp~v~~GY~~~pe~T~~~f~~d 530 (696)
T PLN02387 453 GLTETCAGATFSEWD--DTSVGRVGPPLPCCYVKLVSWEEGGYLISDKPMPRGEIVIGGPSVTLGYFKNQEKTDEVYKVD 530 (696)
T ss_pred chhhcccceeecCcc--cCCCCccCCCCCceEEEEeeccccCcccCCCCCCCceEEeccCcccchhcCCHHHHhhhhccc
Confidence 999998766655443 346789999999999999995443 332 2345799999884
Q ss_pred -----CccccceEEEccCCcEEEEcccCcceee-CcEEe---eHhHHHhcCCCeeeeEEEeecCCCCCceEEEEEEeCC
Q 043601 400 -----ILMPGDLGYFDEHGQLFIVDRIKELIKC-NGFQV---ELEGVLVSHPEILDAVVIPFPDPEAGEVPIAYVVRSP 469 (488)
Q Consensus 400 -----~~~tGD~~~~~~~g~l~~~GR~~d~i~~-~G~~v---~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~ 469 (488)
|++|||+|++|+||++++.||+||+||. +|++| +||+++.+||.|.+++|++.+.. ..++|+|++.+
T Consensus 531 ~~G~~W~~TGDig~~d~dG~l~i~gR~kd~ik~~~Ge~I~p~eIE~~l~~~p~V~~~~V~g~~~~---~~~~a~vv~~~ 606 (696)
T PLN02387 531 ERGMRWFYTGDIGQFHPDGCLEIIDRKKDIVKLQHGEYVSLGKVEAALSVSPYVDNIMVHADPFH---SYCVALVVPSQ 606 (696)
T ss_pred cCCCceeecCceEEECCCCcEEEEEcccceEECCCCeEEchHHHHHHHhcCCCeeEEEEEecCCc---ceEEEEEEeCH
Confidence 7889999999999999999999999998 69999 99999999999999999987633 36888888754
No 56
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.6e-57 Score=461.70 Aligned_cols=452 Identities=23% Similarity=0.335 Sum_probs=368.9
Q ss_pred CCHHHHHhhccccCCCceEEEeCCC--CcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHHcCC
Q 043601 27 LSMVHFLFRNSASYGSKSALIDADS--GESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQFPICLLGVIAIGG 104 (488)
Q Consensus 27 ~~l~~~l~~~a~~~p~~~a~~~~~~--~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~ 104 (488)
.++.++|+.+++.+|++.++.+... .+.+||.||+++++++|++|.+.|+++||+|+++++|++++++++|||+++|+
T Consensus 10 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~~d~v~i~~~~~~~~~~~~la~~~~G~ 89 (539)
T PRK07008 10 LLISSLIAHAARHAGDTEIVSRRVEGDIHRYTYRDCERRAKQLAQALAALGVEPGDRVGTLAWNGYRHLEAYYGVSGSGA 89 (539)
T ss_pred CCHHHHHHHHHhhCCCceEEEeeccCcceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCc
Confidence 5789999999999999999876322 26899999999999999999999999999999999999999999999999999
Q ss_pred eEeecCCCCCHHHHHHHHhhcCCeEEEEccccHHHHhccC-----CCeEEEcccCcccCCCCcCCCCccchHHHHhhcCC
Q 043601 105 IATTANPVYTVSELSKQVKDSSPKLVVTVPELWERVKDFN-----IPAVLLGSNHIVSPRGLRSSSNIVYFDELIELSGN 179 (488)
Q Consensus 105 ~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (488)
+++|++|..+.+++..+++.+++++++++.+..+.+.... ...++...+....+ .......+++++.....
T Consensus 90 ~~v~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~~~- 165 (539)
T PRK07008 90 VCHTINPRLFPEQIAYIVNHAEDRYVLFDLTFLPLVDALAPQCPNVKGWVAMTDAAHLP---AGSTPLLCYETLVGAQD- 165 (539)
T ss_pred EEeecccccCHHHHHHHHhccCCcEEEEcchhHHHHHHHHhhCCCceEEEEEccCCccc---cCCcccccHHHHhcccC-
Confidence 9999999999999999999999999999987665544321 11222111111000 01122445666554322
Q ss_pred CCCCCCCCCCCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHhhhhhhcCCCCcEEEEecchhhHHhHHHHHHHHhhC
Q 043601 180 ASNFPDVSVKQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTAMDQELAGALDYVTLCVLPMFHVFGLSFVVYAQLQK 259 (488)
Q Consensus 180 ~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 259 (488)
.........++++++++|||||||.||+|++||.++..+.........+...++++++...|++|.+++ ...+.++..
T Consensus 166 -~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~~~-~~~~~~l~~ 243 (539)
T PRK07008 166 -GDYDWPRFDENQASSLCYTSGTTGNPKGALYSHRSTVLHAYGAALPDAMGLSARDAVLPVVPMFHVNAW-GLPYSAPLT 243 (539)
T ss_pred -CCcCcccCCcccceEEEECCCCCCCCcEEEEecHHHHHHHHHhhcccccCCCCCceEEecCchHHhhhH-HHHHHHHhc
Confidence 122233456788999999999999999999999998754323223334556788999999999998876 555777889
Q ss_pred CceEEEcC-CCCHHHHHHHHHhcCccEEEecHHHHHHHHhcCCccCCCCCCCccEEEEccCCCcHHHHHHHHhhCCCCeE
Q 043601 260 GNCVVSMR-KFDLETALRAIEKYRVTHWWVVPPIILALAKNVSLVKKFDLSSLKGIGSGAAPLRKELVEECSKNLPTVTV 338 (488)
Q Consensus 260 G~~~~~~~-~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~i 338 (488)
|+++++.+ .+++..+++.++++++|++.++|+.+..+++. ......+++++|.++++|+++++++.+.|.+.++ ..+
T Consensus 244 G~~~~~~~~~~~~~~~~~~l~~~~vt~~~~~P~~~~~l~~~-~~~~~~~~~~l~~~~~~G~~l~~~~~~~~~~~~~-~~l 321 (539)
T PRK07008 244 GAKLVLPGPDLDGKSLYELIEAERVTFSAGVPTVWLGLLNH-MREAGLRFSTLRRTVIGGSACPPAMIRTFEDEYG-VEV 321 (539)
T ss_pred CceEEEecCCcCHHHHHHHHHHcCCEEEEechHHHHHHHhc-ccccCCCcccceEEEEcCCCCCHHHHHHHHHHhC-Cce
Confidence 99998874 47899999999999999999999999999887 4445567889999999999999999999999996 899
Q ss_pred EeccCcccccccccccCCCC---------CCCCCCceeecCCCceEEEEeCCCCCCCCCC--CcceEEEecC--------
Q 043601 339 FQGYGMTETCGVVTVENPLL---------GVQNSGSTGTLVAGVEAQIVCVDTLKPLPPN--QVGELWVRGP-------- 399 (488)
Q Consensus 339 ~~~YG~tE~~~~~~~~~~~~---------~~~~~~~~g~~~~~~~~~i~d~~~~~~~~~g--~~Gel~v~g~-------- 399 (488)
++.||+||++..++.+.... ......++|+|+|++.++|+| +++++++.+ +.|||+++|+
T Consensus 322 ~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~pg~~~~i~d-~~~~~~~~~~~~~Gei~v~g~~~~~gy~~ 400 (539)
T PRK07008 322 IHAWGMTEMSPLGTLCKLKWKHSQLPLDEQRKLLEKQGRVIYGVDMKIVG-DDGRELPWDGKAFGDLQVRGPWVIDRYFR 400 (539)
T ss_pred ecccccccccccceecccccccccCCchhhhhhcccCCccccceEEEEEC-CCCCccCCCCCcceEEEEeCCccchhhcC
Confidence 99999999986554332110 011246789999999999999 578877754 5799999984
Q ss_pred ---------CccccceEEEccCCcEEEEcccCcceeeCcEEe---eHhHHHhcCCCeeeeEEEeecCCCCCceEEEEEEe
Q 043601 400 ---------ILMPGDLGYFDEHGQLFIVDRIKELIKCNGFQV---ELEGVLVSHPEILDAVVIPFPDPEAGEVPIAYVVR 467 (488)
Q Consensus 400 ---------~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v---~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~ 467 (488)
|++|||++++++||.+++.||++|+|+.+|.+| +||.++.++|.|.+++|++.++...++.++++|+.
T Consensus 401 ~~~~~~~~g~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~p~eIE~~l~~~p~v~~~~v~~~~~~~~~~~~~~~v~~ 480 (539)
T PRK07008 401 GDASPLVDGWFPTGDVATIDADGFMQITDRSKDVIKSGGEWISSIDIENVAVAHPAVAEAACIACAHPKWDERPLLVVVK 480 (539)
T ss_pred ChhhhhcCCCcccCceEEEcCCCcEEEeecccCEEEeCCeEEcHHHHHHHHHhCCceeEEEEEecCCchhccceEEEEEe
Confidence 689999999999999999999999999999999 99999999999999999999988888899999998
Q ss_pred CCCCCCCHHHHHHHHHhhcC
Q 043601 468 SPNSSLTKEDVQKFVANDSQ 487 (488)
Q Consensus 468 ~~~~~~~~~~i~~~~~~~l~ 487 (488)
+++...+.++++++++++|+
T Consensus 481 ~~~~~~~~~~l~~~~~~~l~ 500 (539)
T PRK07008 481 RPGAEVTREELLAFYEGKVA 500 (539)
T ss_pred CCCCccCHHHHHHHHHhhcc
Confidence 88777788999999999875
No 57
>PRK06178 acyl-CoA synthetase; Validated
Probab=100.00 E-value=9.4e-57 Score=460.87 Aligned_cols=473 Identities=26% Similarity=0.382 Sum_probs=375.9
Q ss_pred eeeecCCCCCCCCCCCCCCHHHHHhhccccCCCceEEEeCCCCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCC
Q 043601 10 GIYRSLRPALVLPQDPNLSMVHFLFRNSASYGSKSALIDADSGESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNS 89 (488)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~ 89 (488)
..|....|....-+.+..++.++|.++++.+|+++|+.+. ++.+||.||++++.++|.+|.+.|+++|++|+++++|+
T Consensus 16 ~~~~~~~~~~~~~~~~~~~l~~~l~~~a~~~p~~~al~~~--~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~ 93 (567)
T PRK06178 16 AAWPAGIPREPEYPHGERPLTEYLRAWARERPQRPAIIFY--GHVITYAELDELSDRFAALLRQRGVGAGDRVAVFLPNC 93 (567)
T ss_pred hhCCcCCCCCCCCCcCcccHHHHHHHHHHHCCCceEEEEC--CceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCC
Confidence 3455455554322333478999999999999999999887 68999999999999999999999999999999999999
Q ss_pred cchHHHHHHHHHcCCeEeecCCCCCHHHHHHHHhhcCCeEEEEccccHHHHhccC----CCeEEEcccCcccCCC--CcC
Q 043601 90 IQFPICLLGVIAIGGIATTANPVYTVSELSKQVKDSSPKLVVTVPELWERVKDFN----IPAVLLGSNHIVSPRG--LRS 163 (488)
Q Consensus 90 ~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~--~~~ 163 (488)
++++++++||+++|++++|++|..+..++.++++.++++++++++...+.+.... ...+.+.......... ...
T Consensus 94 ~~~~~~~lA~~~~G~~~v~l~p~~~~~~~~~~l~~~~~~~ii~~~~~~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 173 (567)
T PRK06178 94 PQFHIVFFGILKLGAVHVPVSPLFREHELSYELNDAGAEVLLALDQLAPVVEQVRAETSLRHVIVTSLADVLPAEPTLPL 173 (567)
T ss_pred cHHHHHHHHHHHhCeEEeecCCCCCHHHHHHHHHhcCCcEEEEccchHHHHHHhhccCCcceEEEecccccccccccccc
Confidence 9999999999999999999999999999999999999999999988776654331 1222221111100000 000
Q ss_pred C-------CCccchHHHHhhcCC-CCCCCCCCCCCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHhhhhhhcCCCCc
Q 043601 164 S-------SNIVYFDELIELSGN-ASNFPDVSVKQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTAMDQELAGALDY 235 (488)
Q Consensus 164 ~-------~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~ 235 (488)
. .....+.++...... ..........++++++|+|||||||.||+|++||.++....... ........+++
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~t~~~~~~~~~~~-~~~~~~~~~~d 252 (567)
T PRK06178 174 PDSLRAPRLAAAGAIDLLPALRACTAPVPLPPPALDALAALNYTGGTTGMPKGCEHTQRDMVYTAAAA-YAVAVVGGEDS 252 (567)
T ss_pred ccccccccccccccccHHHHhhccccccccCCCCCCCeEEEEeCCCCCCCCceEEeccHHHHHHHHHH-HHHhccCCCCc
Confidence 0 000111122211110 01122234567899999999999999999999999988653222 11224567889
Q ss_pred EEEEecchhhHHhHHHHHHHHhhCCceEEEcCCCCHHHHHHHHHhcCccEEEecHHHHHHHHhcCCccCCCCCCCccEEE
Q 043601 236 VTLCVLPMFHVFGLSFVVYAQLQKGNCVVSMRKFDLETALRAIEKYRVTHWWVVPPIILALAKNVSLVKKFDLSSLKGIG 315 (488)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~v~ 315 (488)
+++..+|++|.+|+...++.++..|+++++.+++++..+++.+++++++.+.++|..+..+... ......++++++.+.
T Consensus 253 ~~l~~~p~~~~~g~~~~~~~~l~~G~~~~l~~~~~~~~~~~~i~~~~~t~~~~~~~~~~~l~~~-~~~~~~~l~~l~~~~ 331 (567)
T PRK06178 253 VFLSFLPEFWIAGENFGLLFPLFSGATLVLLARWDAVAFMAAVERYRVTRTVMLVDNAVELMDH-PRFAEYDLSSLRQVR 331 (567)
T ss_pred EEEEecchHHHHHHHHHHHHHHHcCceEEEeCCCCHHHHHHHHHHhCCeEEeccHHHHHHHHhC-CCCCCCCcchheeee
Confidence 9999999999999877788899999999999989999999999999999999999999998876 444455677888765
Q ss_pred E--ccCCCcHHHHHHHHhhCCCCeEE-eccCcccccccccccCCCC-----CCCCCCceeecCCCceEEEEeCCCCCCCC
Q 043601 316 S--GAAPLRKELVEECSKNLPTVTVF-QGYGMTETCGVVTVENPLL-----GVQNSGSTGTLVAGVEAQIVCVDTLKPLP 387 (488)
Q Consensus 316 ~--~G~~l~~~~~~~~~~~~~~~~i~-~~YG~tE~~~~~~~~~~~~-----~~~~~~~~g~~~~~~~~~i~d~~~~~~~~ 387 (488)
. .++.+++++.+.|++.++ ..++ +.||+||++..+....... ......++|+|+|++.++++|++++++++
T Consensus 332 ~~~~~~~~~~~~~~~~~~~~g-~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~g~~v~v~d~~~~~~~~ 410 (567)
T PRK06178 332 VVSFVKKLNPDYRQRWRALTG-SVLAEAAWGMTETHTCDTFTAGFQDDDFDLLSQPVFVGLPVPGTEFKICDFETGELLP 410 (567)
T ss_pred eccccccCCHHHHHHHHHHhC-CcccccccccccccccceeccccccCccccccCCcccccccCCcEEEEEcCCCCCcCC
Confidence 4 459999999999999987 4455 5799999976544332111 12345679999999999999987899999
Q ss_pred CCCcceEEEecC--------------------CccccceEEEccCCcEEEEcccCcceeeCcEEe---eHhHHHhcCCCe
Q 043601 388 PNQVGELWVRGP--------------------ILMPGDLGYFDEHGQLFIVDRIKELIKCNGFQV---ELEGVLVSHPEI 444 (488)
Q Consensus 388 ~g~~Gel~v~g~--------------------~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v---~ie~~l~~~~~v 444 (488)
.|+.|||+++|+ |++|||++++++||++++.||++|+|+.+|.+| +||+++.++++|
T Consensus 411 ~g~~Gel~v~g~~v~~gY~~~~~~~~~~~~dg~~~TGDl~~~~~~g~l~i~GR~~d~i~~~G~~i~~~eiE~~l~~~~~v 490 (567)
T PRK06178 411 LGAEGEIVVRTPSLLKGYWNKPEATAEALRDGWLHTGDIGKIDEQGFLHYLGRRKEMLKVNGMSVFPSEVEALLGQHPAV 490 (567)
T ss_pred CCCceEEEEECCcccccccCChhhhhhcccCCceeecceEEEecCCeEEEEecccccEEECCEEECHHHHHHHHHhCCCe
Confidence 999999999885 578999999999999999999999999999999 999999999999
Q ss_pred eeeEEEeecCCCCCceEEEEEEeCCCCCCCHHHHHHHHHhhcC
Q 043601 445 LDAVVIPFPDPEAGEVPIAYVVRSPNSSLTKEDVQKFVANDSQ 487 (488)
Q Consensus 445 ~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~~~~~~l~ 487 (488)
.+++|++.+++..++.++++|+++++...+.++++++++++++
T Consensus 491 ~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~l~~~~~~~l~ 533 (567)
T PRK06178 491 LGSAVVGRPDPDKGQVPVAFVQLKPGADLTAAALQAWCRENMA 533 (567)
T ss_pred eEEEEEcCcCcccCcceEEEEEeCCCCcCCHHHHHHHHHhcCc
Confidence 9999999988888889999999988777789999999998876
No 58
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=8.3e-57 Score=460.85 Aligned_cols=471 Identities=32% Similarity=0.495 Sum_probs=372.3
Q ss_pred ceeeecCCCCC-CCCC-CCCCCHHHHHhhccccCCCceEEEeCCCCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEc
Q 043601 9 DGIYRSLRPAL-VLPQ-DPNLSMVHFLFRNSASYGSKSALIDADSGESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFA 86 (488)
Q Consensus 9 ~~~~~~~~~~~-~~~~-~~~~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~ 86 (488)
+..|.+..|.. +... .+-+++.+++.+.+..+|++.|+++. ++.+||+||++++.++|++|.+.|+++||+|++++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~p~~~a~~~~--~~~~ty~eL~~~~~~la~~L~~~gv~~gd~V~i~~ 81 (563)
T PRK06710 4 EKPWLKSYPEEIPSTISYDIQPLHKYVEQMASRYPEKKALHFL--GKDITFSVFHDKVKRFANYLQKLGVEKGDRVAIML 81 (563)
T ss_pred CCcccccCCccCCCCCCCCcccHHHHHHHHHHHCCCceEEEec--CeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEC
Confidence 35565554442 2111 12258999999999999999999987 78999999999999999999999999999999999
Q ss_pred CCCcchHHHHHHHHHcCCeEeecCCCCCHHHHHHHHhhcCCeEEEEccccHHHHhccC----CCeEEEcccCccc--CCC
Q 043601 87 PNSIQFPICLLGVIAIGGIATTANPVYTVSELSKQVKDSSPKLVVTVPELWERVKDFN----IPAVLLGSNHIVS--PRG 160 (488)
Q Consensus 87 ~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~----~~~~~~~~~~~~~--~~~ 160 (488)
+|+.++++++|||+++|++++|++|.++.+++..+++.++++.+++++.....+.... ...+.+....... +..
T Consensus 82 ~~~~~~~~~~lA~~~~G~~~vpi~p~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (563)
T PRK06710 82 PNCPQAVIGYYGTLLAGGIVVQTNPLYTERELEYQLHDSGAKVILCLDLVFPRVTNVQSATKIEHVIVTRIADFLPFPKN 161 (563)
T ss_pred CCChHHHHHHHHHHHcCeEEeccCcccCHHHHHHHHhccCCeEEEEeccchhhhhccchhhccceeEEeccccccccccc
Confidence 9999999999999999999999999999999999999999999999986655433221 1111111100000 000
Q ss_pred C------c----------CCCCccchHHHHhhcCCCCCCCCCCCCCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHh
Q 043601 161 L------R----------SSSNIVYFDELIELSGNASNFPDVSVKQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTA 224 (488)
Q Consensus 161 ~------~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~ 224 (488)
. . .......++.+..... ..........+++++++|||||||.||+|.++|.++..+....
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~- 238 (563)
T PRK06710 162 LLYPFVQKKQSNLVVKVSESETIHLWNSVEKEVN--TGVEVPCDPENDLALLQYTGGTTGFPKGVMLTHKNLVSNTLMG- 238 (563)
T ss_pred cccchhhcccccccccccccchhhhhhhhhhccc--cccccccCCCCCEEEEEcCCCCCCCCceEEEehHHHHHHHHHH-
Confidence 0 0 0000001111111000 0111111235789999999999999999999999987542221
Q ss_pred hhhhhc-CCCCcEEEEecchhhHHhHHHHHHHHhhCCceEEEcCCCCHHHHHHHHHhcCccEEEecHHHHHHHHhcCCcc
Q 043601 225 MDQELA-GALDYVTLCVLPMFHVFGLSFVVYAQLQKGNCVVSMRKFDLETALRAIEKYRVTHWWVVPPIILALAKNVSLV 303 (488)
Q Consensus 225 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~ 303 (488)
...... ...++++++..|++|.+++...++.++..|+++++.+++++..+++.++++++|++.++|+.+..++.. ...
T Consensus 239 ~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~-~~~ 317 (563)
T PRK06710 239 VQWLYNCKEGEEVVLGVLPFFHVYGMTAVMNLSIMQGYKMVLIPKFDMKMVFEAIKKHKVTLFPGAPTIYIALLNS-PLL 317 (563)
T ss_pred HhhccCCCCCCceEEEeCchHHHHHHHHHHHHHHHcCCeEEEcCCCCHHHHHHHHHHcCCeEEeccHHHHHHHHcC-Ccc
Confidence 111122 234568889999999999866677889999999998888999999999999999999999999999875 333
Q ss_pred CCCCCCCccEEEEccCCCcHHHHHHHHhhCCCCeEEeccCcccccccccccCCCCCCCCCCceeecCCCceEEEEeCCCC
Q 043601 304 KKFDLSSLKGIGSGAAPLRKELVEECSKNLPTVTVFQGYGMTETCGVVTVENPLLGVQNSGSTGTLVAGVEAQIVCVDTL 383 (488)
Q Consensus 304 ~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d~~~~ 383 (488)
...+++++|.+++||+++++++.+++.+.++ ..+++.||+||++.+....... .....+++|+|.+++.+++++++++
T Consensus 318 ~~~~~~~lr~v~~gg~~~~~~~~~~~~~~~~-~~~~~~YG~tE~~~~~~~~~~~-~~~~~~~~G~~~~~~~~~i~~~~~~ 395 (563)
T PRK06710 318 KEYDISSIRACISGSAPLPVEVQEKFETVTG-GKLVEGYGLTESSPVTHSNFLW-EKRVPGSIGVPWPDTEAMIMSLETG 395 (563)
T ss_pred ccCChhhhhheeeCCCcCCHHHHHHHHHhhC-CCEecccccccCccccccCccc-ccccCCccCCCCCCCeEEEEECCCC
Confidence 4456789999999999999999999999886 8999999999998755433221 1234568999999999999998889
Q ss_pred CCCCCCCcceEEEecC--------------------CccccceEEEccCCcEEEEcccCcceeeCcEEe---eHhHHHhc
Q 043601 384 KPLPPNQVGELWVRGP--------------------ILMPGDLGYFDEHGQLFIVDRIKELIKCNGFQV---ELEGVLVS 440 (488)
Q Consensus 384 ~~~~~g~~Gel~v~g~--------------------~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v---~ie~~l~~ 440 (488)
++++.|+.|||+++|+ ||.|||+++++++|.+++.||.+|+|+++|.+| +||+++.+
T Consensus 396 ~~~~~g~~Gel~v~g~~~~~gY~~~~~~~~~~~~~g~~~TGD~~~~~~~g~~~~~GR~dd~i~~~G~~v~p~eiE~~l~~ 475 (563)
T PRK06710 396 EALPPGEIGEIVVKGPQIMKGYWNKPEETAAVLQDGWLHTGDVGYMDEDGFFYVKDRKKDMIVASGFNVYPREVEEVLYE 475 (563)
T ss_pred ccCCCCCceEEEEecCccchhhhCChHHHhhhcccCcccccceEEEcCCCcEEEeeccccEEEECCEEECHHHHHHHHHh
Confidence 9999999999999986 488999999999999999999999999999999 99999999
Q ss_pred CCCeeeeEEEeecCCCCCceEEEEEEeCCCCCCCHHHHHHHHHhhcC
Q 043601 441 HPEILDAVVIPFPDPEAGEVPIAYVVRSPNSSLTKEDVQKFVANDSQ 487 (488)
Q Consensus 441 ~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~~~~~~l~ 487 (488)
++.|.+++|++.++...++.++++|+.+++...+.++++++++++|+
T Consensus 476 ~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~l~~~~~~~l~ 522 (563)
T PRK06710 476 HEKVQEVVTIGVPDPYRGETVKAFVVLKEGTECSEEELNQFARKYLA 522 (563)
T ss_pred CcceeeEEEEccccCCcCceeEEEEEECCCCCCCHHHHHHHHHHhcc
Confidence 99999999999998888899999999988877888999999998876
No 59
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=100.00 E-value=6.2e-57 Score=459.42 Aligned_cols=458 Identities=24% Similarity=0.341 Sum_probs=371.8
Q ss_pred CCCCCCCCHHHHHhhccccCCCceEEEeC--CCCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHH
Q 043601 21 LPQDPNLSMVHFLFRNSASYGSKSALIDA--DSGESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQFPICLLG 98 (488)
Q Consensus 21 ~~~~~~~~l~~~l~~~a~~~p~~~a~~~~--~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA 98 (488)
.++.+++|+.++|.++++++|+++++... +..+++||+||.++++++|++|.+.|+++||+|+++++|++++++++||
T Consensus 4 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~Ty~el~~~v~~la~~L~~~g~~~gd~v~i~~~~~~~~~~~~la 83 (542)
T PRK06018 4 LMQDWPLLCHRIIDHAARIHGNREVVTRSVEGPIVRTTYAQIHDRALKVSQALDRDGIKLGDRVATIAWNTWRHLEAWYG 83 (542)
T ss_pred hhhcCCCCHHHHHHHHHHhCCCceEEEeeccCCceEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHH
Confidence 45677899999999999999999999853 2237899999999999999999999999999999999999999999999
Q ss_pred HHHcCCeEeecCCCCCHHHHHHHHhhcCCeEEEEccccHHHHhcc-----CCCeEEEcccCcccCCCCcCCCCccchHHH
Q 043601 99 VIAIGGIATTANPVYTVSELSKQVKDSSPKLVVTVPELWERVKDF-----NIPAVLLGSNHIVSPRGLRSSSNIVYFDEL 173 (488)
Q Consensus 99 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (488)
|+++|++++|+++.++.+++..+++.+++++++++.+..+.+... ....+....+..... .....+...++++
T Consensus 84 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 161 (542)
T PRK06018 84 IMGIGAICHTVNPRLFPEQIAWIINHAEDRVVITDLTFVPILEKIADKLPSVERYVVLTDAAHMP--QTTLKNAVAYEEW 161 (542)
T ss_pred HHhcCeEeeccccccCHHHHHHHHhccCCCEEEEccccHHHHHHHHhhCCCccEEEEeccccccc--ccCccccccHHHH
Confidence 999999999999999999999999999999999998766554332 112222211111000 0111233345555
Q ss_pred HhhcCCCCCCCCCCCCCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHhhhhhhcCCCCcEEEEecchhhHHhHHHHH
Q 043601 174 IELSGNASNFPDVSVKQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTAMDQELAGALDYVTLCVLPMFHVFGLSFVV 253 (488)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (488)
..... .........++++++++|||||||.||+|++||.+.............+....+++++...|++|.+++ ...
T Consensus 162 ~~~~~--~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~h~~~~-~~~ 238 (542)
T PRK06018 162 IAEAD--GDFAWKTFDENTAAGMCYTSGTTGDPKGVLYSHRSNVLHALMANNGDALGTSAADTMLPVVPLFHANSW-GIA 238 (542)
T ss_pred hccCC--cccCcccCCccceeeEEecCCCCCCCcEEEEechhHHHHHHHHhhhhhcCCCCCCEEEEecCHHHHhhh-HHH
Confidence 44322 222223456788999999999999999999999975432222223344556788999999999999887 445
Q ss_pred HHHhhCCceEEEcC-CCCHHHHHHHHHhcCccEEEecHHHHHHHHhcCCccCCCCCCCccEEEEccCCCcHHHHHHHHhh
Q 043601 254 YAQLQKGNCVVSMR-KFDLETALRAIEKYRVTHWWVVPPIILALAKNVSLVKKFDLSSLKGIGSGAAPLRKELVEECSKN 332 (488)
Q Consensus 254 ~~~l~~G~~~~~~~-~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~ 332 (488)
+.++..|+++++.. .+++..+++.++++++|++.++|+++..+.++ ......+++++|.++++|+++++++.+.|++
T Consensus 239 ~~~~~~g~~~v~~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~-~~~~~~~~~~lr~~~~~G~~l~~~~~~~~~~- 316 (542)
T PRK06018 239 FSAPSMGTKLVMPGAKLDGASVYELLDTEKVTFTAGVPTVWLMLLQY-MEKEGLKLPHLKMVVCGGSAMPRSMIKAFED- 316 (542)
T ss_pred HhhhhcCceEEccCcCCCHHHHHHHHHhcCCceeecCcHHHHHHHhc-ccccCCCcccceEEEEcCCCCCHHHHHHHHH-
Confidence 67789999998874 57889999999999999999999999999887 4444557889999999999999999999999
Q ss_pred CCCCeEEeccCcccccccccccCCCCC---------CCCCCceeecCCCceEEEEeCCCCCCCCCC--CcceEEEecC--
Q 043601 333 LPTVTVFQGYGMTETCGVVTVENPLLG---------VQNSGSTGTLVAGVEAQIVCVDTLKPLPPN--QVGELWVRGP-- 399 (488)
Q Consensus 333 ~~~~~i~~~YG~tE~~~~~~~~~~~~~---------~~~~~~~g~~~~~~~~~i~d~~~~~~~~~g--~~Gel~v~g~-- 399 (488)
++ ..+++.||+||++.+++....... .....++|+|.+++.++|+| +++++++.+ ..|||+++|+
T Consensus 317 ~~-~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~i~v~d-~~~~~~~~~~~~~Gel~i~g~~~ 394 (542)
T PRK06018 317 MG-VEVRHAWGMTEMSPLGTLAALKPPFSKLPGDARLDVLQKQGYPPFGVEMKITD-DAGKELPWDGKTFGRLKVRGPAV 394 (542)
T ss_pred hC-CCeEeeecccccCcccccccCccccccCCchhhhhccccCCCCCCCcEEEEEC-CCCCCCCCCCCceeEEEEecCCc
Confidence 75 999999999999876554321100 01235789999999999999 578877753 6799999864
Q ss_pred ----------------CccccceEEEccCCcEEEEcccCcceeeCcEEe---eHhHHHhcCCCeeeeEEEeecCCCCCce
Q 043601 400 ----------------ILMPGDLGYFDEHGQLFIVDRIKELIKCNGFQV---ELEGVLVSHPEILDAVVIPFPDPEAGEV 460 (488)
Q Consensus 400 ----------------~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v---~ie~~l~~~~~v~~~~v~~~~~~~~~~~ 460 (488)
||+|||+++++++|++++.||.+|+|+.+|.+| +||.++.++|+|.+++|++.+++..++.
T Consensus 395 ~~gy~~~~~~~~~~~~~~~TGDl~~~~~~g~~~~~GR~~d~i~~~G~~v~~~eIE~~l~~~~~v~~~~v~~~~~~~~~~~ 474 (542)
T PRK06018 395 AAAYYRVDGEILDDDGFFDTGDVATIDAYGYMRITDRSKDVIKSGGEWISSIDLENLAVGHPKVAEAAVIGVYHPKWDER 474 (542)
T ss_pred chhhhcCcccEecCCcEEEcCCEEEEcCCccEEEEecCCCeEEECCEEECHHHHHHHHHhCCcceeEEEEeccCCCcCce
Confidence 589999999999999999999999999999999 9999999999999999999999888899
Q ss_pred EEEEEEeCCCCCCCHHHHHHHHHhhcC
Q 043601 461 PIAYVVRSPNSSLTKEDVQKFVANDSQ 487 (488)
Q Consensus 461 ~~~~v~~~~~~~~~~~~i~~~~~~~l~ 487 (488)
+.++|++.++...+.++++++++++++
T Consensus 475 ~~~~v~~~~~~~~~~~~l~~~~~~~l~ 501 (542)
T PRK06018 475 PLLIVQLKPGETATREEILKYMDGKIA 501 (542)
T ss_pred eEEEEEeCCCCCCCHHHHHHHHHhhCc
Confidence 999999988888888999999999875
No 60
>PRK09088 acyl-CoA synthetase; Validated
Probab=100.00 E-value=7e-57 Score=453.91 Aligned_cols=424 Identities=23% Similarity=0.352 Sum_probs=353.1
Q ss_pred hhccccCCCceEEEeCCCCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHHcCCeEeecCCCC
Q 043601 34 FRNSASYGSKSALIDADSGESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQFPICLLGVIAIGGIATTANPVY 113 (488)
Q Consensus 34 ~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~ 113 (488)
..+++.+|+++|+.+..++..+||+||++.++++|++|.+.|+++|++|+++++|++++++++|||+++|++++|+++.+
T Consensus 2 ~~~a~~~p~~~a~~~~~~~~~~ty~~l~~~v~~~a~~l~~~g~~~~~~v~i~~~~~~~~~~~~la~~~~G~~~v~~~~~~ 81 (488)
T PRK09088 2 AFHARLQPQRLAAVDLALGRRWTYAELDALVGRLAAVLRRRGCVDGERLAVLARNSVWLVALHFACARVGAIYVPLNWRL 81 (488)
T ss_pred chhhhhCCCceEEEecCCCcEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCeEEEeeCccC
Confidence 35678899999998744478999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhhcCCeEEEEccccHHHHhccCCCeEEEcccCcccCCCCcCCCCccchHHHHhhcCCCCCCCCCCCCCCCE
Q 043601 114 TVSELSKQVKDSSPKLVVTVPELWERVKDFNIPAVLLGSNHIVSPRGLRSSSNIVYFDELIELSGNASNFPDVSVKQTDT 193 (488)
Q Consensus 114 ~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (488)
+.+.+..+++.++++++|+++....... ....++++.................+++
T Consensus 82 ~~~~~~~~~~~~~~~~ii~~~~~~~~~~------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (488)
T PRK09088 82 SASELDALLQDAEPRLLLGDDAVAAGRT------------------------DVEDLAAFIASADALEPADTPSIPPERV 137 (488)
T ss_pred CHHHHHHHHHhCCCCEEEEcchhhcccc------------------------cccchhhhhhhccccccccCCCCCCCCc
Confidence 9999999999999999999865432100 0011122211111001111123456789
Q ss_pred EEEEcccCCCCCCchhhhccHHHHHHhhHHhhhhhhcCCCCcEEEEecchhhHHhHHHHHHHHhhCCceEEEcCCCCHHH
Q 043601 194 AALLYSSGTTGVGKGAILTHKNFIASSLMTAMDQELAGALDYVTLCVLPMFHVFGLSFVVYAQLQKGNCVVSMRKFDLET 273 (488)
Q Consensus 194 a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~ 273 (488)
++++|||||||.||+|.+||+++...+. ..........++++++.+|++|.+++...++.++..|+++++.+.+++..
T Consensus 138 ~~i~~TSGTTG~PK~v~~s~~~l~~~~~--~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~ 215 (488)
T PRK09088 138 SLILFTSGTSGQPKGVMLSERNLQQTAH--NFGVLGRVDAHSSFLCDAPMFHIIGLITSVRPVLAVGGSILVSNGFEPKR 215 (488)
T ss_pred eEEEeCCCCCCCCcEEEEehHHHHHHHH--HHHHhhCCCCCcEEEEecchHHHHHHHHHHHHHHhcCCEEEEcCCCCHHH
Confidence 9999999999999999999999987633 23334456788999999999999999778888999999999988888999
Q ss_pred HHHHHH--hcCccEEEecHHHHHHHHhcCCccCCCCCCCccEEEEccCCCcHHHHHHHHhhCCCCeEEeccCcccccccc
Q 043601 274 ALRAIE--KYRVTHWWVVPPIILALAKNVSLVKKFDLSSLKGIGSGAAPLRKELVEECSKNLPTVTVFQGYGMTETCGVV 351 (488)
Q Consensus 274 ~~~~l~--~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~i~~~YG~tE~~~~~ 351 (488)
++..+. ++++|.++++|.++..+.+. .......++++|.+++||++++.+..+.+.+. ++.+++.||+||++.+.
T Consensus 216 ~~~~~~~~~~~~t~~~~~P~~~~~l~~~-~~~~~~~~~~l~~~~~gG~~~~~~~~~~~~~~--g~~v~~~YG~TE~~~~~ 292 (488)
T PRK09088 216 TLGRLGDPALGITHYFCVPQMAQAFRAQ-PGFDAAALRHLTALFTGGAPHAAEDILGWLDD--GIPMVDGFGMSEAGTVF 292 (488)
T ss_pred HHHHHHhhccCCcEEeeHHHHHHHHHhC-cCcCccccccceEEEecCCCCCHHHHHHHHHh--CCceeeeeccccccccc
Confidence 998886 48999999999999998875 33344567899999999999999998888865 48999999999998654
Q ss_pred cccCC-CCCCCCCCceeecCCCceEEEEeCCCCCCCCCCCcceEEEecC---------------------CccccceEEE
Q 043601 352 TVENP-LLGVQNSGSTGTLVAGVEAQIVCVDTLKPLPPNQVGELWVRGP---------------------ILMPGDLGYF 409 (488)
Q Consensus 352 ~~~~~-~~~~~~~~~~g~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~---------------------~~~tGD~~~~ 409 (488)
..... .....+.+++|.|.+++.++|+| +++++++.|+.|||+++|+ |++|||+|++
T Consensus 293 ~~~~~~~~~~~~~~~vG~~~~~~~~~i~d-~~~~~~~~g~~Gel~v~~~~~~~gY~~~~~~~~~~~~~~g~~~TGDl~~~ 371 (488)
T PRK09088 293 GMSVDCDVIRAKAGAAGIPTPTVQTRVVD-DQGNDCPAGVPGELLLRGPNLSPGYWRRPQATARAFTGDGWFRTGDIARR 371 (488)
T ss_pred ccCCCcccccccCCccccCCCCcEEEEEC-CCCCCCcCCCceEEEEECCccchhhcCChhhhhhhhcCCCCeeecceEEE
Confidence 33211 11123567899999999999999 5789999999999999974 6889999999
Q ss_pred ccCCcEEEEcccCcceeeCcEEe---eHhHHHhcCCCeeeeEEEeecCCCCCceEEEEEEeCCCCCCCHHHHHHHHHhhc
Q 043601 410 DEHGQLFIVDRIKELIKCNGFQV---ELEGVLVSHPEILDAVVIPFPDPEAGEVPIAYVVRSPNSSLTKEDVQKFVANDS 486 (488)
Q Consensus 410 ~~~g~l~~~GR~~d~i~~~G~~v---~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~~~~~~l 486 (488)
+++|.+++.||.+|+|+.+|.+| +||+++.++|.|.+++|++.+++..++..+++|+++++...+.+++++++++++
T Consensus 372 ~~~g~l~i~GR~~d~i~~~G~~i~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~~~~~~v~~~~~~~~~~~~l~~~~~~~l 451 (488)
T PRK09088 372 DADGFFWVVDRKKDMFISGGENVYPAEIEAVLADHPGIRECAVVGMADAQWGEVGYLAIVPADGAPLDLERIRSHLSTRL 451 (488)
T ss_pred cCCCcEEEeccccceEEeCCEEECHHHHHHHHHhCCCcceEEEEeCCCccCCceeEEEEEECCCCCCCHHHHHHHHHhhC
Confidence 99999999999999999999999 999999999999999999998877788889999988776677899999999887
Q ss_pred C
Q 043601 487 Q 487 (488)
Q Consensus 487 ~ 487 (488)
+
T Consensus 452 ~ 452 (488)
T PRK09088 452 A 452 (488)
T ss_pred c
Confidence 5
No 61
>PLN03102 acyl-activating enzyme; Provisional
Probab=100.00 E-value=9.3e-57 Score=460.35 Aligned_cols=449 Identities=24% Similarity=0.367 Sum_probs=351.9
Q ss_pred CCCCHHHHHhhccccCCCceEEEeCCCCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHHcCC
Q 043601 25 PNLSMVHFLFRNSASYGSKSALIDADSGESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQFPICLLGVIAIGG 104 (488)
Q Consensus 25 ~~~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~ 104 (488)
++.|+.++|.+.++.+|+++|++.. +.++||+||+++++++|++|.+.|+++||+|+|+++|++++++++|||+++|+
T Consensus 12 ~~~~~~~~l~~~~~~~p~~~Al~~~--~~~~Ty~eL~~~~~~~a~~L~~~Gl~~gd~Vai~~~n~~e~~~~~la~~~~G~ 89 (579)
T PLN03102 12 VPLTPITFLKRASECYPNRTSIIYG--KTRFTWPQTYDRCCRLAASLISLNITKNDVVSVLAPNTPAMYEMHFAVPMAGA 89 (579)
T ss_pred ccccHHHHHHHHHHhCCCCeEEEEC--CcEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCc
Confidence 4468999999999999999999987 68999999999999999999999999999999999999999999999999999
Q ss_pred eEeecCCCCCHHHHHHHHhhcCCeEEEEccccHHHHhcc-----------CCCeEEEcccCcccCCCCcCCCCccchHHH
Q 043601 105 IATTANPVYTVSELSKQVKDSSPKLVVTVPELWERVKDF-----------NIPAVLLGSNHIVSPRGLRSSSNIVYFDEL 173 (488)
Q Consensus 105 ~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (488)
+++|+++.++.+++.++++.++++++|++++....+... ..+.+.+....... .......+++++
T Consensus 90 ~~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 165 (579)
T PLN03102 90 VLNPINTRLDATSIAAILRHAKPKILFVDRSFEPLAREVLHLLSSEDSNLNLPVIFIHEIDFPK----RPSSEELDYECL 165 (579)
T ss_pred EEeeccccCCHHHHHHHHhccCCeEEEEChhhHHHHHHHHhhccccccccCceEEEeccccccc----CCcccccCHHHH
Confidence 999999999999999999999999999988766544332 11222222111000 011122345555
Q ss_pred HhhcCCCCCC---CCCCCCCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHhhhhhhcCCCCcEEEEecchhhHHhHH
Q 043601 174 IELSGNASNF---PDVSVKQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTAMDQELAGALDYVTLCVLPMFHVFGLS 250 (488)
Q Consensus 174 ~~~~~~~~~~---~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (488)
.......... ......++++++|+|||||||.||+|+++|.++...... ..........++.++.+|++|..++
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~d~~~il~TSGTTG~PK~v~~s~~~~~~~~~~--~~~~~~~~~~~~~l~~~pl~h~~g~- 242 (579)
T PLN03102 166 IQRGEPTPSLVARMFRIQDEHDPISLNYTSGTTADPKGVVISHRGAYLSTLS--AIIGWEMGTCPVYLWTLPMFHCNGW- 242 (579)
T ss_pred HhccCCCCcccccccccCCCCCcEEEEeCCcCCCCCCEEEEecHHHHHHHHH--HHhhcCCCCCCeEEecCChhhhcch-
Confidence 4332211110 011245689999999999999999999999997654222 2223345566788999999999988
Q ss_pred HHHHHHhhCCceEEEcCCCCHHHHHHHHHhcCccEEEecHHHHHHHHhcCCccCCCCCCCccEEEEccCCCcHHHHHHHH
Q 043601 251 FVVYAQLQKGNCVVSMRKFDLETALRAIEKYRVTHWWVVPPIILALAKNVSLVKKFDLSSLKGIGSGAAPLRKELVEECS 330 (488)
Q Consensus 251 ~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~ 330 (488)
...+.++..|+++++.+.+++..+++.|+++++|+++++|+++..|.+. ........++++.+++||+++++.+.+.+.
T Consensus 243 ~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~-~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~ 321 (579)
T PLN03102 243 TFTWGTAARGGTSVCMRHVTAPEIYKNIEMHNVTHMCCVPTVFNILLKG-NSLDLSPRSGPVHVLTGGSPPPAALVKKVQ 321 (579)
T ss_pred hHHHHHHHhcCcEEeeccCChHHHHHHHHHcCCeEEEeChHHHHHHHhC-cccccCCcccceEEEECCCCCCHHHHHHHH
Confidence 5566778889999988888899999999999999999999999999876 333334556788899999999999999987
Q ss_pred hhCCCCeEEeccCcccccccccccCCCC------------CCCCCCceeecCCCceEEEEeCCCCCCCCC--CCcceEEE
Q 043601 331 KNLPTVTVFQGYGMTETCGVVTVENPLL------------GVQNSGSTGTLVAGVEAQIVCVDTLKPLPP--NQVGELWV 396 (488)
Q Consensus 331 ~~~~~~~i~~~YG~tE~~~~~~~~~~~~------------~~~~~~~~g~~~~~~~~~i~d~~~~~~~~~--g~~Gel~v 396 (488)
+ ++ +++++.||+||+++.++...... .....+..+.+++ .+++.+.+++++++. ++.|||++
T Consensus 322 ~-~g-~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~--~v~i~~~~~~~~v~~~~~~~GEl~v 397 (579)
T PLN03102 322 R-LG-FQVMHAYGLTEATGPVLFCEWQDEWNRLPENQQMELKARQGVSILGLA--DVDVKNKETQESVPRDGKTMGEIVI 397 (579)
T ss_pred H-cC-CeEEeecCccccCccccccccccccccCCcccccccccCCCccccccc--ceEEeccccccccCCCCCCceEEEE
Confidence 6 54 89999999999986443321110 0011222333343 456667667777765 36799999
Q ss_pred ecC--------------------CccccceEEEccCCcEEEEcccCcceeeCcEEe---eHhHHHhcCCCeeeeEEEeec
Q 043601 397 RGP--------------------ILMPGDLGYFDEHGQLFIVDRIKELIKCNGFQV---ELEGVLVSHPEILDAVVIPFP 453 (488)
Q Consensus 397 ~g~--------------------~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v---~ie~~l~~~~~v~~~~v~~~~ 453 (488)
+|+ ||+|||+|++|+||++++.||.+|+|+.+|.+| +||.++.++|.|.+++|++.+
T Consensus 398 ~g~~~~~GY~~~~~~t~~~f~~gw~~TGDlg~~d~dG~l~i~GR~~d~i~~~G~~v~p~eIE~~l~~~p~V~~a~vv~~~ 477 (579)
T PLN03102 398 KGSSIMKGYLKNPKATSEAFKHGWLNTGDVGVIHPDGHVEIKDRSKDIIISGGENISSVEVENVLYKYPKVLETAVVAMP 477 (579)
T ss_pred ECcchhhhhcCChhhhHhhhccCceecCceEEEcCCCeEEEEeccCcEEEECCEEECHHHHHHHHHhCCCcceeEEEecc
Confidence 984 789999999999999999999999999999999 999999999999999999999
Q ss_pred CCCCCceEEEEEEeCCCCCC----------CHHHHHHHHHhhcC
Q 043601 454 DPEAGEVPIAYVVRSPNSSL----------TKEDVQKFVANDSQ 487 (488)
Q Consensus 454 ~~~~~~~~~~~v~~~~~~~~----------~~~~i~~~~~~~l~ 487 (488)
++..++.++++|+++++... +.++++++++++|+
T Consensus 478 ~~~~~~~~~a~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~L~ 521 (579)
T PLN03102 478 HPTWGETPCAFVVLEKGETTKEDRVDKLVTRERDLIEYCRENLP 521 (579)
T ss_pred CccccceeEEEEEecCcccccccccccccccHHHHHHHHHhhcc
Confidence 99888999999998766432 35789999998876
No 62
>PRK06188 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1e-56 Score=456.57 Aligned_cols=441 Identities=27% Similarity=0.361 Sum_probs=368.3
Q ss_pred CCCCHHHHHhhccccCCCceEEEeCCCCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHHcCC
Q 043601 25 PNLSMVHFLFRNSASYGSKSALIDADSGESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQFPICLLGVIAIGG 104 (488)
Q Consensus 25 ~~~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~ 104 (488)
++.|+.++|.++++++|+++|+++. +..+||+||.+.+++++..|.+.|+++|++|+++++|++++++++|||+++|+
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~a~~~~--~~~~Ty~~l~~~~~~~a~~L~~~gv~~~~~V~i~~~~~~~~~~~~la~~~~G~ 87 (524)
T PRK06188 10 SGATYGHLLVSALKRYPDRPALVLG--DTRLTYGQLADRISRYIQAFEALGLGTGDAVALLSLNRPEVLMAIGAAQLAGL 87 (524)
T ss_pred CCccHHHHHHHHHHHCCCCeEEEEC--CCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhCC
Confidence 3469999999999999999999987 68999999999999999999999999999999999999999999999999999
Q ss_pred eEeecCCCCCHHHHHHHHhhcCCeEEEEccc-cHHHHhccC-----CCeEEEcccCcccCCCCcCCCCccchHHHHhhcC
Q 043601 105 IATTANPVYTVSELSKQVKDSSPKLVVTVPE-LWERVKDFN-----IPAVLLGSNHIVSPRGLRSSSNIVYFDELIELSG 178 (488)
Q Consensus 105 ~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~-~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (488)
+++|++|..+.+++..+++.++++.+++++. ....+.... ...++..... . ...++.....
T Consensus 88 ~~v~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~---~~~~~~~~~~ 154 (524)
T PRK06188 88 RRTALHPLGSLDDHAYVLEDAGISTLIVDPAPFVERALALLARVPSLKHVLTLGPV----------P---DGVDLLAAAA 154 (524)
T ss_pred EEEecccCCCHHHHHHHHHhcCceEEEEecchhhHHHHHHhhhcCCceEEEEeCCc----------c---chhhHHHhhh
Confidence 9999999999999999999999999999876 333222111 1111111110 0 0111111100
Q ss_pred -CCCCCCCCCCCCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHhhhhhhcCCCCcEEEEecchhhHHhHHHHHHHHh
Q 043601 179 -NASNFPDVSVKQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTAMDQELAGALDYVTLCVLPMFHVFGLSFVVYAQL 257 (488)
Q Consensus 179 -~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 257 (488)
...........++++++++|||||||.||+|.+||.++... .......+....++++++.+|++|.+++ .++.++
T Consensus 155 ~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~l~~~--~~~~~~~~~~~~~~~~l~~~pl~~~~g~--~~~~~l 230 (524)
T PRK06188 155 KFGPAPLVAAALPPDIAGLAYTGGTTGKPKGVMGTHRSIATM--AQIQLAEWEWPADPRFLMCTPLSHAGGA--FFLPTL 230 (524)
T ss_pred ccCcccccccCCCCCeEEEEeCCCCCCCCceeeeehHHHHHH--HHHHHhhcCCCcCcEEEEecCchhhhhH--HHHHHH
Confidence 00111112234566999999999999999999999999887 3334555667788999999999998886 357889
Q ss_pred hCCceEEEcCCCCHHHHHHHHHhcCccEEEecHHHHHHHHhcCCccCCCCCCCccEEEEccCCCcHHHHHHHHhhCCCCe
Q 043601 258 QKGNCVVSMRKFDLETALRAIEKYRVTHWWVVPPIILALAKNVSLVKKFDLSSLKGIGSGAAPLRKELVEECSKNLPTVT 337 (488)
Q Consensus 258 ~~G~~~~~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~ 337 (488)
..|+++++.+..++..+++.++++++++++++|+++..+++. ......+++++|.+++||++++++..+.+.+.++ ..
T Consensus 231 ~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~-~~~~~~~l~~lr~~~~gg~~~~~~~~~~~~~~~~-~~ 308 (524)
T PRK06188 231 LRGGTVIVLAKFDPAEVLRAIEEQRITATFLVPTMIYALLDH-PDLRTRDLSSLETVYYGASPMSPVRLAEAIERFG-PI 308 (524)
T ss_pred HcCCEEEEcCCCCHHHHHHHHHHhCCEEEEehHHHHHHHHhC-cCccCCCCcceeEEEEcCCCCCHHHHHHHHHHhC-ch
Confidence 999999999999999999999999999999999999999987 4445567899999999999999999999999887 78
Q ss_pred EEeccCcccccccccccCCCC----CCCCCCceeecCCCceEEEEeCCCCCCCCCCCcceEEEecC--------------
Q 043601 338 VFQGYGMTETCGVVTVENPLL----GVQNSGSTGTLVAGVEAQIVCVDTLKPLPPNQVGELWVRGP-------------- 399 (488)
Q Consensus 338 i~~~YG~tE~~~~~~~~~~~~----~~~~~~~~g~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~-------------- 399 (488)
+++.||+||++..++...... ......++|+|++++.++++| +++++++.|+.|||+++|+
T Consensus 309 ~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~G~p~~g~~v~i~~-~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~ 387 (524)
T PRK06188 309 FAQYYGQTEAPMVITYLRKRDHDPDDPKRLTSCGRPTPGLRVALLD-EDGREVAQGEVGEICVRGPLVMDGYWNRPEETA 387 (524)
T ss_pred hhheeCccccCCceeecCchhccccccccCCccccccCCcEEEEEc-CCCCCCCCCCeeEEEEECcchhhhhcCChHHhh
Confidence 999999999976555443221 123556899999999999999 5699999999999999985
Q ss_pred ------CccccceEEEccCCcEEEEcccCcceeeCcEEe---eHhHHHhcCCCeeeeEEEeecCCCCCceEEEEEEeCCC
Q 043601 400 ------ILMPGDLGYFDEHGQLFIVDRIKELIKCNGFQV---ELEGVLVSHPEILDAVVIPFPDPEAGEVPIAYVVRSPN 470 (488)
Q Consensus 400 ------~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v---~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~ 470 (488)
|++|||+++++++|.+++.||.+|+++++|++| +||.++.++++|.+++|++.+++..++.++++++++++
T Consensus 388 ~~~~~g~~~TGDl~~~~~~g~~~~~GR~~~~i~~~G~~i~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~ 467 (524)
T PRK06188 388 EAFRDGWLHTGDVAREDEDGFYYIVDRKKDMIVTGGFNVFPREVEDVLAEHPAVAQVAVIGVPDEKWGEAVTAVVVLRPG 467 (524)
T ss_pred hhhcCCceeecceEEEcCCccEEEEeccccceecCCEEECHHHHHHHHHhCCCeeEEEEEeccCCCcCceEEEEEEECCC
Confidence 688999999999999999999999999999999 99999999999999999999888888999999999887
Q ss_pred CCCCHHHHHHHHHhhcC
Q 043601 471 SSLTKEDVQKFVANDSQ 487 (488)
Q Consensus 471 ~~~~~~~i~~~~~~~l~ 487 (488)
...+.++++++++++++
T Consensus 468 ~~~~~~~l~~~~~~~l~ 484 (524)
T PRK06188 468 AAVDAAELQAHVKERKG 484 (524)
T ss_pred CCCCHHHHHHHHHHhcc
Confidence 77788999999998875
No 63
>PRK07867 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2e-56 Score=453.34 Aligned_cols=429 Identities=20% Similarity=0.281 Sum_probs=355.9
Q ss_pred CCHHHHHhhccccCCCceEEEeCCCCcceeHHHHHHHHHHHHHHHHHc-CCCCCCEEEEEcCCCcchHHHHHHHHHcCCe
Q 043601 27 LSMVHFLFRNSASYGSKSALIDADSGESLTFSQFKSIVIKVSHGFRHL-GVTKHDVVLIFAPNSIQFPICLLGVIAIGGI 105 (488)
Q Consensus 27 ~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~-g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~ 105 (488)
.++.++|.+.+. ++++|+++. ++++||.||+++++++|++|+++ |++++++|+++++|++++++++|||+++|++
T Consensus 5 ~~~~~~l~~~a~--~~~~a~~~~--~~~~Ty~el~~~v~~lA~~L~~~~~~~~~~~V~i~~~n~~~~~~~~lA~~~~G~~ 80 (529)
T PRK07867 5 PTVAELLLPLAE--DDDRGLYFE--DSFTSWREHIRGSAARAAALRARLDPTRPPHVGVLLDNTPEFSLLLGAAALSGIV 80 (529)
T ss_pred ccHHHHHHHhcc--cCCceEEEC--CcEEeHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCCHHHHHHHHHHHhcCCE
Confidence 578999988875 789999886 78999999999999999999997 8999999999999999999999999999999
Q ss_pred EeecCCCCCHHHHHHHHhhcCCeEEEEccccHHHHhccCCCeEEEcccCcccCCCCcCCCCccchHHHHhhcCCCCCCCC
Q 043601 106 ATTANPVYTVSELSKQVKDSSPKLVVTVPELWERVKDFNIPAVLLGSNHIVSPRGLRSSSNIVYFDELIELSGNASNFPD 185 (488)
Q Consensus 106 ~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (488)
++|+++.++.+++.++++.++++++|++++....+.........+..+ ...+.+++..... .....
T Consensus 81 ~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~l~~~~~-~~~~~ 146 (529)
T PRK07867 81 PVGLNPTRRGAALARDIAHADCQLVLTESAHAELLDGLDPGVRVINVD-------------SPAWADELAAHRD-AEPPF 146 (529)
T ss_pred EEEecCCCChHHHHHHHHhCCCeEEEECHhHHHHHHhhccCceEEEec-------------cccHHHHhcccCC-CCCCc
Confidence 999999999999999999999999999988776554432111111111 0113333322111 11222
Q ss_pred CCCCCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHhhhhhhcCCCCcEEEEecchhhHHhHHHHHHHHhhCCceEEE
Q 043601 186 VSVKQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTAMDQELAGALDYVTLCVLPMFHVFGLSFVVYAQLQKGNCVVS 265 (488)
Q Consensus 186 ~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~ 265 (488)
....++++++++|||||||.||+|++||.++.... ......+....+|++++.+|++|..++...++.++..|+++++
T Consensus 147 ~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~l~~~~--~~~~~~~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~ 224 (529)
T PRK07867 147 RVADPDDLFMLIFTSGTSGDPKAVRCTHRKVASAG--VMLAQRFGLGPDDVCYVSMPLFHSNAVMAGWAVALAAGASIAL 224 (529)
T ss_pred ccCCccceEEEEECCCCCCCCcEEEecHHHHHHHH--HHHHHhhCCCcccEEEEecchhHHHHHHHHHHHHHhcCceEEe
Confidence 34567899999999999999999999999998763 3344555677889999999999999987777788999999999
Q ss_pred cCCCCHHHHHHHHHhcCccEEEecHHHHHHHHhcCCccCCCCCCCccEEEEccCCCcHHHHHHHHhhCCCCeEEeccCcc
Q 043601 266 MRKFDLETALRAIEKYRVTHWWVVPPIILALAKNVSLVKKFDLSSLKGIGSGAAPLRKELVEECSKNLPTVTVFQGYGMT 345 (488)
Q Consensus 266 ~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~i~~~YG~t 345 (488)
.+++++..+++.++++++|++.++|+.+..++.. ........+++|. ++||+.+++.. +.|.+.++ ..+++.||+|
T Consensus 225 ~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~ll~~-~~~~~~~~~~lr~-~~gg~~~~~~~-~~~~~~~g-~~l~~~YG~T 300 (529)
T PRK07867 225 RRKFSASGFLPDVRRYGATYANYVGKPLSYVLAT-PERPDDADNPLRI-VYGNEGAPGDI-ARFARRFG-CVVVDGFGST 300 (529)
T ss_pred cCCCCHHHHHHHHHHhCCeEEeccHHHHHHHHhC-CCcccccccceEE-EecCCCChHHH-HHHHHHhC-CcEEEeeccc
Confidence 8889999999999999999999999999988875 3322233457874 56888887764 67777886 8999999999
Q ss_pred cccccccccCCCCCCCCCCceeecCCCceEEEEeCCCCCCCCCCC------------cceEEE-ecC-------------
Q 043601 346 ETCGVVTVENPLLGVQNSGSTGTLVAGVEAQIVCVDTLKPLPPNQ------------VGELWV-RGP------------- 399 (488)
Q Consensus 346 E~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d~~~~~~~~~g~------------~Gel~v-~g~------------- 399 (488)
|++..+.... ....+++|.|+++ ++++|++++++++.|+ .|||++ +|+
T Consensus 301 E~~~~~~~~~----~~~~~~~g~~~~~--~~i~~~~~~~~~~~g~~~~~~~~~~~~~~Gel~i~~g~~~~~gy~~~~~~~ 374 (529)
T PRK07867 301 EGGVAITRTP----DTPPGALGPLPPG--VAIVDPDTGTECPPAEDADGRLLNADEAIGELVNTAGPGGFEGYYNDPEAD 374 (529)
T ss_pred ccccccccCC----CCCCCCcCCCCCC--EEEEECCCCCCCCCCccccccccccCCcceEEEEecCCcccccccCChHhh
Confidence 9986554322 2345678999998 6788877888899888 899999 663
Q ss_pred -------CccccceEEEccCCcEEEEcccCcceeeCcEEe---eHhHHHhcCCCeeeeEEEeecCCCCCceEEEEEEeCC
Q 043601 400 -------ILMPGDLGYFDEHGQLFIVDRIKELIKCNGFQV---ELEGVLVSHPEILDAVVIPFPDPEAGEVPIAYVVRSP 469 (488)
Q Consensus 400 -------~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v---~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~ 469 (488)
||.|||+++++++|.+++.||++|+|+++|.+| +||.++.++|+|.+++|++.+++..++.++++|+..+
T Consensus 375 ~~~~~~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~p~eIE~~l~~~p~V~~~~V~g~~~~~~g~~~~a~vv~~~ 454 (529)
T PRK07867 375 AERMRGGVYWSGDLAYRDADGYAYFAGRLGDWMRVDGENLGTAPIERILLRYPDATEVAVYAVPDPVVGDQVMAALVLAP 454 (529)
T ss_pred hhhhcCCeEeeccEEEEeCCCcEEEeccccCeEEECCEEeCHHHHHHHHHhCCCeeEEEEEeccCCCCCeeEEEEEEECC
Confidence 789999999999999999999999999999999 9999999999999999999999999999999999998
Q ss_pred CCCCCHHHHHHHHHhh
Q 043601 470 NSSLTKEDVQKFVAND 485 (488)
Q Consensus 470 ~~~~~~~~i~~~~~~~ 485 (488)
+...+.++++++++++
T Consensus 455 ~~~~~~~~l~~~~~~~ 470 (529)
T PRK07867 455 GAKFDPDAFAEFLAAQ 470 (529)
T ss_pred CCCCCHHHHHHHHHhh
Confidence 8788999999999875
No 64
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=8.9e-58 Score=473.26 Aligned_cols=437 Identities=24% Similarity=0.354 Sum_probs=348.4
Q ss_pred CCCCHHHHHhhccccCCCceEEEeCC-------CCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHH
Q 043601 25 PNLSMVHFLFRNSASYGSKSALIDAD-------SGESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQFPICLL 97 (488)
Q Consensus 25 ~~~~l~~~l~~~a~~~p~~~a~~~~~-------~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~l 97 (488)
++.|+.++|.++++.+|+++|+++.+ ..+.+||+||+++++++|++|.+. +++||+|+++++|+++|++++|
T Consensus 19 ~~~~l~~~l~~~a~~~~~~~a~~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~-~~~gd~V~i~~~n~~e~~~~~l 97 (631)
T PRK07769 19 PNTNLVRHVERWAKVRGDKLAYRFLDFSTERDGVARDLTWSQFGARNRAVGARLQQV-TKPGDRVAILAPQNLDYLIAFF 97 (631)
T ss_pred ccCCHHHHHHHHHHhCCCCeEEEEeccCCCCCCceeEeeHHHHHHHHHHHHHHHHHh-cCCCCEEEEEcCCChHHHHHHH
Confidence 44799999999999999999998632 126899999999999999999887 8999999999999999999999
Q ss_pred HHHHcCCeEeec-CCCCC--HHHHHHHHhhcCCeEEEEccccHHHHhccC-------CCeEEEcccCcccCCCCcCCCCc
Q 043601 98 GVIAIGGIATTA-NPVYT--VSELSKQVKDSSPKLVVTVPELWERVKDFN-------IPAVLLGSNHIVSPRGLRSSSNI 167 (488)
Q Consensus 98 A~~~~G~~~v~l-~~~~~--~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~ 167 (488)
||+++|++++|+ ++..+ .+++.++++.++++++|++++....+.... ...++.. +.
T Consensus 98 A~~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~------------- 163 (631)
T PRK07769 98 GALYAGRIAVPLFDPAEPGHVGRLHAVLDDCTPSAILTTTDSAEGVRKFFRARPAKERPRVIAV-DA------------- 163 (631)
T ss_pred HHHHcCCEEEeeCCCCccchHHHHHHHHHhCCCCEEEEChHHHHHHHHHHhhccccccceEEEc-cc-------------
Confidence 999999999999 45554 678999999999999999987655433210 0111110 00
Q ss_pred cchHHHHhhcCCCCCCCCCCCCCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHhhhhhhcCCCCcEEEEecchhhHH
Q 043601 168 VYFDELIELSGNASNFPDVSVKQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTAMDQELAGALDYVTLCVLPMFHVF 247 (488)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (488)
..+.. . .........++++++|+|||||||.||+|++||.++.... ......+...++++++..+|++|..
T Consensus 164 --~~~~~---~--~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~--~~~~~~~~~~~~d~~l~~~Pl~h~~ 234 (631)
T PRK07769 164 --VPDEV---G--ATWVPPEANEDTIAYLQYTSGSTRIPAGVQITHLNLPTNV--LQVIDALEGQEGDRGVSWLPFFHDM 234 (631)
T ss_pred --ccccc---c--cccCCCCCCCCCeEEEEeCCCCCCCCcEEEEcHHHHHHHH--HHHHHHcCCCCcceEEEeCCCcCch
Confidence 00000 0 0111123467899999999999999999999999998763 3344556677889999999999999
Q ss_pred hHHHHHHHHhhCCceEEEcCC--C--CHHHHHHHHHhcCc---cEEEecHHHHHHHHhcC--Cc--cCCCCCCCccEEEE
Q 043601 248 GLSFVVYAQLQKGNCVVSMRK--F--DLETALRAIEKYRV---THWWVVPPIILALAKNV--SL--VKKFDLSSLKGIGS 316 (488)
Q Consensus 248 ~~~~~~~~~l~~G~~~~~~~~--~--~~~~~~~~l~~~~~---t~l~~~p~~~~~l~~~~--~~--~~~~~l~~lr~v~~ 316 (488)
|+. ..+.++..|+++++.++ + ++..+++.++++++ +.+.++|+++..+.... .. ....++++||.+++
T Consensus 235 gl~-~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~lr~~~~ 313 (631)
T PRK07769 235 GLI-TVLLPALLGHYITFMSPAAFVRRPGRWIRELARKPGGTGGTFSAAPNFAFEHAAARGLPKDGEPPLDLSNVKGLLN 313 (631)
T ss_pred hhH-HHHHHHhhCCeEEEEChHHHHhCHHHHHHHHHhhccccCceEeeCCchHHHHHHhhccchhcccCcchhheeeEEe
Confidence 984 45566778999887753 3 88999999999876 78999999887766531 11 12457899999999
Q ss_pred ccCCCcHHHHHHHHhhCC-----CCeEEeccCcccccccccccCCCCC-------------------------CCCCCce
Q 043601 317 GAAPLRKELVEECSKNLP-----TVTVFQGYGMTETCGVVTVENPLLG-------------------------VQNSGST 366 (488)
Q Consensus 317 ~G~~l~~~~~~~~~~~~~-----~~~i~~~YG~tE~~~~~~~~~~~~~-------------------------~~~~~~~ 366 (488)
||+++++++.++|.+.|+ ...+++.||+||++..++....... .....++
T Consensus 314 gg~~l~~~~~~~~~~~~~~~g~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~ 393 (631)
T PRK07769 314 GSEPVSPASMRKFNEAFAPYGLPPTAIKPSYGMAEATLFVSTTPMDEEPTVIYVDRDELNAGRFVEVPADAPNAVAQVSA 393 (631)
T ss_pred ccCCCCHHHHHHHHHHHhhcCCChhhcccccchhhheeEEeccCCCCCceEEEEcHHHHhCCCeEecCCCCCCceeEEeC
Confidence 999999999999999873 2468999999999765554321110 0012478
Q ss_pred eecCCCceEEEEeCCCCCCCCCCCcceEEEecC--------------------------------------CccccceEE
Q 043601 367 GTLVAGVEAQIVCVDTLKPLPPNQVGELWVRGP--------------------------------------ILMPGDLGY 408 (488)
Q Consensus 367 g~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~--------------------------------------~~~tGD~~~ 408 (488)
|+|.++..++|+|.+++++++.|+.|||+++|+ ||+|||+|+
T Consensus 394 G~~~~~~~~~ivd~~~g~~~~~ge~GEl~v~gp~v~~GY~~~~~~t~~~f~~~~~~~~~~~~~~~~~~~~gw~~TGDlg~ 473 (631)
T PRK07769 394 GKVGVSEWAVIVDPETASELPDGQIGEIWLHGNNIGTGYWGKPEETAATFQNILKSRLSESHAEGAPDDALWVRTGDYGV 473 (631)
T ss_pred CCcCCCcEEEEEcCCCCcCCCCCCEEEEEecCCCccccccCChhHHHHHHhhhcccccccccccCcccCCCeeecccccc
Confidence 999999999999987899999999999999872 689999999
Q ss_pred EccCCcEEEEcccCcceeeCcEEe---eHhHHHhc-CCCeee--eEEEeecC-------------------CCCCceEEE
Q 043601 409 FDEHGQLFIVDRIKELIKCNGFQV---ELEGVLVS-HPEILD--AVVIPFPD-------------------PEAGEVPIA 463 (488)
Q Consensus 409 ~~~~g~l~~~GR~~d~i~~~G~~v---~ie~~l~~-~~~v~~--~~v~~~~~-------------------~~~~~~~~~ 463 (488)
+ +||++++.||+||+||++|++| |||.++.+ ||.|.+ ++|++.++ +.+++.+++
T Consensus 474 ~-~dG~l~i~GR~~d~Ik~~G~~V~p~eIE~~l~~~~p~v~~~~~av~~v~d~~~~~~~~~~~~~~~~~~~~~~ge~~~a 552 (631)
T PRK07769 474 Y-FDGELYITGRVKDLVIIDGRNHYPQDLEYTAQEATKALRTGYVAAFSVPANQLPQVVFDDSHAGLKFDPEDTSEQLVI 552 (631)
T ss_pred E-ECCEEEEEcccccEEEECCeeeCHHHHHHHHHhccccccCCcEEEEEecccccccccccccccccccccCCCCccEEE
Confidence 9 4999999999999999999999 99999986 899998 89999887 557889999
Q ss_pred EEEeCCC-CCCCHHHHHHHHHhhcC
Q 043601 464 YVVRSPN-SSLTKEDVQKFVANDSQ 487 (488)
Q Consensus 464 ~v~~~~~-~~~~~~~i~~~~~~~l~ 487 (488)
+|+++++ ...+.++|+++++++|+
T Consensus 553 ~v~~~~~~~~~~~~~l~~~~~~~l~ 577 (631)
T PRK07769 553 VAERAPGAHKLDPQPIADDIRAAIA 577 (631)
T ss_pred EEEecCccccccHHHHHHHHHHHHH
Confidence 9999887 35788999999998764
No 65
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=100.00 E-value=4.1e-57 Score=466.17 Aligned_cols=448 Identities=20% Similarity=0.260 Sum_probs=354.6
Q ss_pred CCCCCCCCHHHHHhhccccCCCceEEEeCCCCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHH
Q 043601 21 LPQDPNLSMVHFLFRNSASYGSKSALIDADSGESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQFPICLLGVI 100 (488)
Q Consensus 21 ~~~~~~~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~ 100 (488)
.++.+..|+.+.|.++++++|+++|+++. ++.+||+||+++++++|++|.+.|+++|++|+++++|++++++++|||+
T Consensus 31 ~~~~~~~tl~~~l~~~a~~~p~~~Ai~~~--~~~~Ty~eL~~~~~~la~~L~~~g~~~gd~V~i~~~n~~~~v~~~lA~~ 108 (600)
T PRK08279 31 ITPDSKRSLGDVFEEAAARHPDRPALLFE--DQSISYAELNARANRYAHWAAARGVGKGDVVALLMENRPEYLAAWLGLA 108 (600)
T ss_pred cCCCCcccHHHHHHHHHHhCCCCcEEEeC--CCcccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHH
Confidence 34456689999999999999999999987 7899999999999999999999999999999999999999999999999
Q ss_pred HcCCeEeecCCCCCHHHHHHHHhhcCCeEEEEccccHHHHhccCC-----CeEEEcccCcccCCCCcCCCCccchHHHHh
Q 043601 101 AIGGIATTANPVYTVSELSKQVKDSSPKLVVTVPELWERVKDFNI-----PAVLLGSNHIVSPRGLRSSSNIVYFDELIE 175 (488)
Q Consensus 101 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (488)
++|++++|+++..+.+++.++++.++++++|++++....+..... ..+....... ......+.++..
T Consensus 109 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~ 180 (600)
T PRK08279 109 KLGAVVALLNTQQRGAVLAHSLNLVDAKHLIVGEELVEAFEEARADLARPPRLWVAGGDT--------LDDPEGYEDLAA 180 (600)
T ss_pred hcCcEEeecCCCCCHHHHHHHHHhcCCCEEEEChHHHHHHHHHhhhhcccceEEEecCcc--------ccccccHHHHhh
Confidence 999999999999999999999999999999999877665543211 1122211100 000112223322
Q ss_pred hcCCCC---CCCCCCCCCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHhhhhhhcCCCCcEEEEecchhhHHhHHHH
Q 043601 176 LSGNAS---NFPDVSVKQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTAMDQELAGALDYVTLCVLPMFHVFGLSFV 252 (488)
Q Consensus 176 ~~~~~~---~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (488)
...... .........+++++|+|||||||.||+|++||.++..++ ......+...++++++..+|++|.+++...
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PKgV~~sh~~l~~~~--~~~~~~~~l~~~d~~l~~~pl~h~~g~~~~ 258 (600)
T PRK08279 181 AAAGAPTTNPASRSGVTAKDTAFYIYTSGTTGLPKAAVMSHMRWLKAM--GGFGGLLRLTPDDVLYCCLPLYHNTGGTVA 258 (600)
T ss_pred hcccCCccCCCcccCCCccccEEEEEcCCCCCCCcEEEEeHHHHHHHH--HHHHHhcCCCCCcEEEEecCchhhhhHHHH
Confidence 111101 112234567899999999999999999999999999873 334455677889999999999999999777
Q ss_pred HHHHhhCCceEEEcCCCCHHHHHHHHHhcCccEEEecHHHHHHHHhcCCccCCCCCCCccEEEEccCCCcHHHHHHHHhh
Q 043601 253 VYAQLQKGNCVVSMRKFDLETALRAIEKYRVTHWWVVPPIILALAKNVSLVKKFDLSSLKGIGSGAAPLRKELVEECSKN 332 (488)
Q Consensus 253 ~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~ 332 (488)
++.++..|+++++.+.+++..+++.++++++|++.++|++++.++.. .........++|. ++|+.+++++++.|.+.
T Consensus 259 ~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~p~l~~~l~~~-~~~~~~~~~~l~~--~~g~~l~~~~~~~~~~~ 335 (600)
T PRK08279 259 WSSVLAAGATLALRRKFSASRFWDDVRRYRATAFQYIGELCRYLLNQ-PPKPTDRDHRLRL--MIGNGLRPDIWDEFQQR 335 (600)
T ss_pred HHHHHhcCcEEEEcCCCCHHHHHHHHHHhcceEEeehHHHHHHHHhC-CCCccccCcceeE--EecCCCCHHHHHHHHHH
Confidence 78889999999999999999999999999999999999999998876 3333334566775 34778999999999999
Q ss_pred CCCCeEEeccCcccccccccccCCCCCCCCCCceeecCC----CceEEEEeCC--------CC--CCCCCCCcceEEE--
Q 043601 333 LPTVTVFQGYGMTETCGVVTVENPLLGVQNSGSTGTLVA----GVEAQIVCVD--------TL--KPLPPNQVGELWV-- 396 (488)
Q Consensus 333 ~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~g~~~~----~~~~~i~d~~--------~~--~~~~~g~~Gel~v-- 396 (488)
|+...+++.||+||++...... ....+++|.+.+ +..+..++.+ ++ .+++.|+.||+++
T Consensus 336 ~~~~~l~~~YG~tE~~~~~~~~-----~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~Gel~~~i 410 (600)
T PRK08279 336 FGIPRILEFYAASEGNVGFINV-----FNFDGTVGRVPLWLAHPYAIVKYDVDTGEPVRDADGRCIKVKPGEVGLLIGRI 410 (600)
T ss_pred hCcceeeeeecccccceeeccc-----CCCCcccccccccccccceeeeeccCcCceeeCCCCccccCCCCCceeEEEEe
Confidence 9855799999999987533221 234456776665 3333222211 22 3578899999984
Q ss_pred ec--------------------------CCccccceEEEccCCcEEEEcccCcceeeCcEEe---eHhHHHhcCCCeeee
Q 043601 397 RG--------------------------PILMPGDLGYFDEHGQLFIVDRIKELIKCNGFQV---ELEGVLVSHPEILDA 447 (488)
Q Consensus 397 ~g--------------------------~~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v---~ie~~l~~~~~v~~~ 447 (488)
.| .||+|||+|++++||.+++.||.||+||++|++| +||+++.++|+|.++
T Consensus 411 ~~~~~~~GY~~~~~t~~~~~~~~~~~~~~~~~TGDlg~~~~dG~l~~~GR~~d~ik~~G~~i~p~eIE~~l~~~p~V~~a 490 (600)
T PRK08279 411 TDRGPFDGYTDPEASEKKILRDVFKKGDAWFNTGDLMRDDGFGHAQFVDRLGDTFRWKGENVATTEVENALSGFPGVEEA 490 (600)
T ss_pred cCcccccccCCchhhHHHHhhcccCCCCceEeecceEEEcCCccEEEecccCCeEEECCcccCHHHHHHHHhcCCCcceE
Confidence 22 3789999999999999999999999999999999 999999999999999
Q ss_pred EEEeecCCC-CCceEEEEEEeCCCCCCCHHHHHHHHHhhcCC
Q 043601 448 VVIPFPDPE-AGEVPIAYVVRSPNSSLTKEDVQKFVANDSQL 488 (488)
Q Consensus 448 ~v~~~~~~~-~~~~~~~~v~~~~~~~~~~~~i~~~~~~~l~~ 488 (488)
+|++.+.+. .+...+++++..++...+.++++++|+++|+.
T Consensus 491 ~v~gv~~~~~~~~~~~~~vv~~~~~~~~~~~l~~~l~~~L~~ 532 (600)
T PRK08279 491 VVYGVEVPGTDGRAGMAAIVLADGAEFDLAALAAHLYERLPA 532 (600)
T ss_pred EEEEeecCCCCCccceeEEEecCCccCCHHHHHHHHHhhCcc
Confidence 999987654 34456666676666677899999999998863
No 66
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.9e-56 Score=456.21 Aligned_cols=470 Identities=28% Similarity=0.447 Sum_probs=373.4
Q ss_pred eeeecCCCC---CCCCCCCCCCHHHHHhhccccCCCceEEEeCCCCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEc
Q 043601 10 GIYRSLRPA---LVLPQDPNLSMVHFLFRNSASYGSKSALIDADSGESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFA 86 (488)
Q Consensus 10 ~~~~~~~~~---~~~~~~~~~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~ 86 (488)
..|....++ ...+..+..++.++|.++++.+|+++|+++. ++.+||+||+++++++|++|.+.|+++|++|++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~a~~~p~~~a~~~~--~~~lTy~~l~~~~~~~a~~L~~~gi~~gd~V~i~~ 80 (557)
T PRK07059 3 KIWLKSYPPGVPAEIDASQYPSLADLLEESFRQYADRPAFICM--GKAITYGELDELSRALAAWLQSRGLAKGARVAIMM 80 (557)
T ss_pred CCccccCCCCCCCccCCCCCCCHHHHHHHHHHHcCCCceEEEc--CceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEC
Confidence 345443333 3344455578999999999999999999987 78999999999999999999999999999999999
Q ss_pred CCCcchHHHHHHHHHcCCeEeecCCCCCHHHHHHHHhhcCCeEEEEccccHHHHhcc----CCCeEEEcccCcc-cC---
Q 043601 87 PNSIQFPICLLGVIAIGGIATTANPVYTVSELSKQVKDSSPKLVVTVPELWERVKDF----NIPAVLLGSNHIV-SP--- 158 (488)
Q Consensus 87 ~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~----~~~~~~~~~~~~~-~~--- 158 (488)
+|++++++++|||+++|++++|++|.++.+++.++++.++++++|+++...+.+... ....+.+...... ..
T Consensus 81 ~n~~~~~~~~la~~~~G~~~v~v~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (557)
T PRK07059 81 PNVLQYPVAIAAVLRAGYVVVNVNPLYTPRELEHQLKDSGAEAIVVLENFATTVQQVLAKTAVKHVVVASMGDLLGFKGH 160 (557)
T ss_pred CCCHHHHHHHHHHHhcCeEEeccCcccCHHHHHHHHHccCceEEEEchhhHHHHHHhhcccCCceeEEeccccccccccc
Confidence 999999999999999999999999999999999999999999999988765544322 1122221110000 00
Q ss_pred ------------CCCcCCCCccchHHHHhhcCCCCCCCCCCCCCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHhhh
Q 043601 159 ------------RGLRSSSNIVYFDELIELSGNASNFPDVSVKQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTAMD 226 (488)
Q Consensus 159 ------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~ 226 (488)
...........+++.+..... .........++++++|+|||||||.||+|+++|.++..+.......
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~il~TSGTTG~PK~v~~s~~~l~~~~~~~~~~ 239 (557)
T PRK07059 161 IVNFVVRRVKKMVPAWSLPGHVRFNDALAEGAR-QTFKPVKLGPDDVAFLQYTGGTTGVSKGATLLHRNIVANVLQMEAW 239 (557)
T ss_pred ccccccccccccccccCCCCcccHHHHhhccCC-CCCCCCCCCcCceEEEEeCCCCCCCCcEEEeecHHHHHHHHHHhhh
Confidence 000011222334444433221 2222344677899999999999999999999999997653221111
Q ss_pred --hhhcC---CCCcEEEEecchhhHHhHHHHHHHHhhCCceEEEcC-CCCHHHHHHHHHhcCccEEEecHHHHHHHHhcC
Q 043601 227 --QELAG---ALDYVTLCVLPMFHVFGLSFVVYAQLQKGNCVVSMR-KFDLETALRAIEKYRVTHWWVVPPIILALAKNV 300 (488)
Q Consensus 227 --~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~ 300 (488)
..... .....+++.+|++|.+++....+.++..|++.++.+ ..++..+++.+++++++.+.++|+++..+...
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~- 318 (557)
T PRK07059 240 LQPAFEKKPRPDQLNFVCALPLYHIFALTVCGLLGMRTGGRNILIPNPRDIPGFIKELKKYQVHIFPAVNTLYNALLNN- 318 (557)
T ss_pred hcccccccCCCCCcEEEEeCCcHHHHHHHHHHHHHHhhcceEEEecCCcCHHHHHHHHHHhCCeeeecCHHHHHHHHcC-
Confidence 11111 124567788999999887677778888888876665 45889999999999999999999999999887
Q ss_pred CccCCCCCCCccEEEEccCCCcHHHHHHHHhhCCCCeEEeccCcccccccccccCCCCCCCCCCceeecCCCceEEEEeC
Q 043601 301 SLVKKFDLSSLKGIGSGAAPLRKELVEECSKNLPTVTVFQGYGMTETCGVVTVENPLLGVQNSGSTGTLVAGVEAQIVCV 380 (488)
Q Consensus 301 ~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d~ 380 (488)
......+++++|.++.||+++++.+.+.|.+.++ +++++.||+||++.+++..... ......++|.|++++.++++|
T Consensus 319 ~~~~~~~~~~l~~~~~gg~~~~~~~~~~~~~~~~-~~~~~~YG~tE~~~~~~~~~~~-~~~~~~~vG~p~~g~~v~i~d- 395 (557)
T PRK07059 319 PDFDKLDFSKLIVANGGGMAVQRPVAERWLEMTG-CPITEGYGLSETSPVATCNPVD-ATEFSGTIGLPLPSTEVSIRD- 395 (557)
T ss_pred cCcCcCCchhheEEEeccccCCHHHHHHHHHHhC-CCeeeccccccccchhhcCCCC-CCCcCCcccCccCCcEEEEEC-
Confidence 4444567889999999999999999999999886 9999999999998776544322 234467899999999999999
Q ss_pred CCCCCCCCCCcceEEEecC---------------------CccccceEEEccCCcEEEEcccCcceeeCcEEe---eHhH
Q 043601 381 DTLKPLPPNQVGELWVRGP---------------------ILMPGDLGYFDEHGQLFIVDRIKELIKCNGFQV---ELEG 436 (488)
Q Consensus 381 ~~~~~~~~g~~Gel~v~g~---------------------~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v---~ie~ 436 (488)
+++++++.|+.|||+++|+ ||.|||+++++++|.+++.||++|+++.+|.+| +||+
T Consensus 396 ~~~~~~~~g~~Gel~v~g~~~~~gY~~~~~~~~~~~~~~g~~~TGDl~~~~~~g~~~~~GR~~~~i~~~G~~i~p~~iE~ 475 (557)
T PRK07059 396 DDGNDLPLGEPGEICIRGPQVMAGYWNRPDETAKVMTADGFFRTGDVGVMDERGYTKIVDRKKDMILVSGFNVYPNEIEE 475 (557)
T ss_pred CCCCCCCCCCceEEEEeCCccchhhhcCHHHHhhhcccCCceecCcEEEEcCCCcEEEecccccceEECCEEEcHHHHHH
Confidence 6789999999999999873 688999999999999999999999999999999 9999
Q ss_pred HHhcCCCeeeeEEEeecCCCCCceEEEEEEeCCCCCCCHHHHHHHHHhhcC
Q 043601 437 VLVSHPEILDAVVIPFPDPEAGEVPIAYVVRSPNSSLTKEDVQKFVANDSQ 487 (488)
Q Consensus 437 ~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~~~~~~l~ 487 (488)
++.++++|.+++|++.++...++.++++|+.++. ..+.++++++++++|+
T Consensus 476 ~l~~~~~V~~~~v~~~~~~~~ge~~~~~v~~~~~-~~~~~~l~~~~~~~l~ 525 (557)
T PRK07059 476 VVASHPGVLEVAAVGVPDEHSGEAVKLFVVKKDP-ALTEEDVKAFCKERLT 525 (557)
T ss_pred HHHhCCceeEEEEEecccCCCCeeEEEEEEeCCC-CCCHHHHHHHHHHhcc
Confidence 9999999999999999888888899999887653 4677899999998875
No 67
>KOG1256 consensus Long-chain acyl-CoA synthetases (AMP-forming) [Lipid transport and metabolism]
Probab=100.00 E-value=1.1e-57 Score=441.20 Aligned_cols=441 Identities=26% Similarity=0.324 Sum_probs=361.4
Q ss_pred CCCCCCCHHHHHhhccccCCCceEEEeCC------CCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHH
Q 043601 22 PQDPNLSMVHFLFRNSASYGSKSALIDAD------SGESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQFPIC 95 (488)
Q Consensus 22 ~~~~~~~l~~~l~~~a~~~p~~~a~~~~~------~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~ 95 (488)
+.+...|+.+.|.+.+..+|+.+++-... ...++||+|.++++.+++..|+++|+++++.|+|++.|++||+++
T Consensus 70 ~~~~~~T~~~~f~~~~~~~~~~p~LG~r~~~~~~~~~~~~tY~q~~e~~~~~~~~l~~lG~~~~~~VGIy~~N~pEWiis 149 (691)
T KOG1256|consen 70 PFDGPLTLYEGFRRSVEKSGNGPMLGTRVIVDGKGPYEWLTYKQVYERAENLGSGLRKLGVKEDSKVGIYAFNRPEWIIS 149 (691)
T ss_pred CCCCcccHHHHhhcchhccCCCCceeEEecccCCCCcEEEEHHHHHHHHHHHHHHHHHhCCCCCceEEEeccCChhhHHh
Confidence 34567999999999999999999985432 238999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCeEeecCCCCCHHHHHHHHhhcCCeEEEEc-cccHHHHhccC-------CCeEEEcccC--cccCCCCcCCC
Q 043601 96 LLGVIAIGGIATTANPVYTVSELSKQVKDSSPKLVVTV-PELWERVKDFN-------IPAVLLGSNH--IVSPRGLRSSS 165 (488)
Q Consensus 96 ~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~-~~~~~~~~~~~-------~~~~~~~~~~--~~~~~~~~~~~ 165 (488)
.+||...|+++||+..+.+++.+.++++++.+.++|+| ++....+.... ++.++..... ...........
T Consensus 150 ~~a~~~~~~v~VplYdTlg~ea~~~Ii~~~e~~iv~vd~~~k~~~ll~~~~~~~~~~LK~iI~~~~~~~~~~~~~~~~gv 229 (691)
T KOG1256|consen 150 EMACYAYSLVNVPLYDTLGAEAVHYIINHAEISIVFVDNAKKAEKLLEIKENDSLPSLKAIIQLDEPSDELKEKAENNGV 229 (691)
T ss_pred HHHHHhcCCEEeecccCCCHHHHHHHHHhcceeEEEEeCHHHHHHHHhhcccccCccceeEEEecCCchhhhhhhhcCCe
Confidence 99999999999999999999999999999999999999 45555544321 2223322221 12223333445
Q ss_pred CccchHHHHhhcCCCCCCCCCCCCCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHH----hhhhhhcCCCCcEEEEec
Q 043601 166 NIVYFDELIELSGNASNFPDVSVKQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMT----AMDQELAGALDYVTLCVL 241 (488)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~----~~~~~~~~~~~~~~~~~~ 241 (488)
.+.+|+++.+.+......+.....+++.|.|+|||||||+||||++||+|+....... ...........|.+++.+
T Consensus 230 ~v~S~~e~~~lG~~~~~~~~~~p~p~d~atI~yTSGTTG~PKGVMLTH~Niv~~v~~~~~~~~~~~~~~~~~~dv~lSyL 309 (691)
T KOG1256|consen 230 EVYSWDEFEELGKKNQRKPRVPPKPDDLATICYTSGTTGNPKGVMLTHRNIVSDVAGIFFLSAAENAKATVGDDVYLSYL 309 (691)
T ss_pred EEEEHHHHHhhcccccCCCCCCCCccceEEEEEcCCCCCCCceEEEeccceeehhhhhhhhhhcccccccccCceEEEeC
Confidence 6889999999886422222257889999999999999999999999999998853211 111111233469999999
Q ss_pred chhhHHhHHHHHHHHhhCCceEEEcCCCCHHHHHHHHHhcCccEEEecHHHHHHHHhcCCc-------------------
Q 043601 242 PMFHVFGLSFVVYAQLQKGNCVVSMRKFDLETALRAIEKYRVTHWWVVPPIILALAKNVSL------------------- 302 (488)
Q Consensus 242 ~~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~------------------- 302 (488)
|+.|++... .-+..++.|+++.+..+ |+..+.+.|++.+||.+.++|..|+++.+....
T Consensus 310 PLAHi~er~-~~~~~~~~G~~IgF~~g-D~~~l~~dlk~lkPT~f~~VPRVl~riye~I~~~~~~sgflkr~l~~~A~~~ 387 (691)
T KOG1256|consen 310 PLAHIFERV-VELYTFYIGAKIGFARG-DILKLTDDLKELKPTVFPGVPRVLERIYEGIQKQVQKSGFLKRKLFNFAMAY 387 (691)
T ss_pred cHHHHHHHH-HHHhHhhcccEEEEecC-ChHHHHHHHHHhCCcEEeccHhHHHHHHHHHHHHHhcchHHHHHHHHHHHHH
Confidence 999999984 44445688999998875 888899999999999999999998877544300
Q ss_pred ------cCCCC-------------------CCCccEEEEccCCCcHHHHHHHHhhCCCCeEEeccCcccccccccccCCC
Q 043601 303 ------VKKFD-------------------LSSLKGIGSGAAPLRKELVEECSKNLPTVTVFQGYGMTETCGVVTVENPL 357 (488)
Q Consensus 303 ------~~~~~-------------------l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~i~~~YG~tE~~~~~~~~~~~ 357 (488)
..+.. ..++|.+++|++|+++++...++..++ +++.+.||+||+++.++...+.
T Consensus 388 k~~~~~~~G~~~~~~~~~D~lVf~KI~~~LGg~vr~~~sGaAPls~ev~~F~r~~~g-~~v~eGYGlTEts~g~~~~~~~ 466 (691)
T KOG1256|consen 388 KLEHRLMKGKSRSRDRFADKLVFHKIKQSLGGNVRLIISGAAPLSPEVLTFFRAALG-CRVLEGYGLTETSAGTTLTLPG 466 (691)
T ss_pred HHHHHhhCCCCcccchHHHHHHHHHHHHHhcCceeEEEecCCCCCHHHHHHHHHhcC-ceeeecccccccCCceEeccCC
Confidence 00000 148999999999999999999999987 9999999999999666665554
Q ss_pred CCCCCCCceeecCCCceEEEEeCCCCCCCCCCCcceEEEecC---------------------CccccceEEEccCCcEE
Q 043601 358 LGVQNSGSTGTLVAGVEAQIVCVDTLKPLPPNQVGELWVRGP---------------------ILMPGDLGYFDEHGQLF 416 (488)
Q Consensus 358 ~~~~~~~~~g~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~---------------------~~~tGD~~~~~~~g~l~ 416 (488)
+...+++|.|+|+++++++|+++.+.-+.|..|||||+|+ |++|||+|+|+++|.|.
T Consensus 467 --d~~lgsvG~p~p~~~vKL~dvpe~ny~a~~~~GEIcirG~~Vf~GYyK~p~~T~e~ideDGWLhTGDiG~~~p~G~l~ 544 (691)
T KOG1256|consen 467 --DNVLGSVGPPVPGNEVKLVDVPEMNYDADGSKGEICVRGPNVFMGYYKDPEKTAEAIDEDGWLHTGDIGEWDPNGTLK 544 (691)
T ss_pred --CCCCCCcCCcccCceEEEechHHhCcCcCCCcceEEEecchhceeccCChHHHhhhhccccccccccceeECCCccEE
Confidence 3478999999999999999988888878888999999997 88999999999999999
Q ss_pred EEcccCcceee-CcEEe---eHhHHHhcCCCeeeeEEEeecCCCCCceEEEEEEeCCC
Q 043601 417 IVDRIKELIKC-NGFQV---ELEGVLVSHPEILDAVVIPFPDPEAGEVPIAYVVRSPN 470 (488)
Q Consensus 417 ~~GR~~d~i~~-~G~~v---~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~ 470 (488)
+.||+++++|. +|++| .||++..+.+.|.+.+|.+..... .++++|++++.
T Consensus 545 IidRkK~ifklaqGEyVaPe~IEniy~~~~~V~qi~V~g~s~~~---~LvaiVvpd~e 599 (691)
T KOG1256|consen 545 IIDRKKNIFKLAQGEYVAPEKIENIYKRSLPVQQIFVLGDSLRS---FLVAIVVPDPE 599 (691)
T ss_pred EEecccceEEcCCCCccChHHHHHHHhcCCceEEEEEECCcchh---cEEEEEecChh
Confidence 99999999999 89999 899999999999999999876543 79999999764
No 68
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=2.7e-56 Score=456.49 Aligned_cols=451 Identities=26% Similarity=0.439 Sum_probs=362.0
Q ss_pred CCHHHHHhhccccCCCceEEEeCCCCcceeHHHHHHHHHHHHHHHHHc-CCCCCCEEEEEcCCCcchHHHHHHHHHcCCe
Q 043601 27 LSMVHFLFRNSASYGSKSALIDADSGESLTFSQFKSIVIKVSHGFRHL-GVTKHDVVLIFAPNSIQFPICLLGVIAIGGI 105 (488)
Q Consensus 27 ~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~-g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~ 105 (488)
.++.+.|.++++++|+++|+.+. ++.+||.||.++++++|++|.+. |+++||+|+++++|++++++++|||+++|++
T Consensus 24 ~~~~~~l~~~~~~~p~~~a~~~~--~~~~Ty~~l~~~~~~~a~~L~~~~gi~~gd~V~i~~~n~~e~~~~~la~~~~G~v 101 (562)
T PRK12492 24 KSVVEVFERSCKKFADRPAFSNL--GVTLSYAELERHSAAFAAYLQQHTDLVPGDRIAVQMPNVLQYPIAVFGALRAGLI 101 (562)
T ss_pred CcHHHHHHHHHHhCCCCeeEecC--CceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCeE
Confidence 58999999999999999999876 68999999999999999999985 9999999999999999999999999999999
Q ss_pred EeecCCCCCHHHHHHHHhhcCCeEEEEccccHHHHhccC----CCeEEEcc--c--Cccc---C-------C---CCcCC
Q 043601 106 ATTANPVYTVSELSKQVKDSSPKLVVTVPELWERVKDFN----IPAVLLGS--N--HIVS---P-------R---GLRSS 164 (488)
Q Consensus 106 ~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~----~~~~~~~~--~--~~~~---~-------~---~~~~~ 164 (488)
++|+++.++.+++.++++.++++.+++++.....+.... ...+.... + .... . . .....
T Consensus 102 ~v~~~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (562)
T PRK12492 102 VVNTNPLYTAREMRHQFKDSGARALVYLNMFGKLVQEVLPDTGIEYLIEAKMGDLLPAAKGWLVNTVVDKVKKMVPAYHL 181 (562)
T ss_pred EeccCccCCHHHHHHHHhccCceEEEeccccchHHHHhhhccCceEEEeechhhccccccchhcccccccccccccccCC
Confidence 999999999999999999999999999876544332211 11111000 0 0000 0 0 00001
Q ss_pred CCccchHHHHhhcCCCCCCCCCCCCCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHhhhhhhc---------CCC-C
Q 043601 165 SNIVYFDELIELSGNASNFPDVSVKQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTAMDQELA---------GAL-D 234 (488)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~---------~~~-~ 234 (488)
.....+++....... ..........+++++|+|||||||.||+|+++|.++..+... ....+. ... .
T Consensus 182 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~ 258 (562)
T PRK12492 182 PQAVPFKQALRQGRG-LSLKPVPVGLDDIAVLQYTGGTTGLAKGAMLTHGNLVANMLQ--VRACLSQLGPDGQPLMKEGQ 258 (562)
T ss_pred cccccHHHHHhccCC-CCCCCCCCCcCCeEEEEeCCCCCCCCceEEEechhHHHHHHH--HHHHHhcccccccccccCCC
Confidence 122334444432221 112223456789999999999999999999999998765322 111111 122 3
Q ss_pred cEEEEecchhhHHhHHHHHHHHhhCCceEEEc-CCCCHHHHHHHHHhcCccEEEecHHHHHHHHhcCCccCCCCCCCccE
Q 043601 235 YVTLCVLPMFHVFGLSFVVYAQLQKGNCVVSM-RKFDLETALRAIEKYRVTHWWVVPPIILALAKNVSLVKKFDLSSLKG 313 (488)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~-~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~ 313 (488)
++++..+|++|.+++....+..+..|.+.++. .+.++..+++.++++++|++.++|+++..++.. ......+++++|.
T Consensus 259 ~~~~~~~pl~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~-~~~~~~~~~~lr~ 337 (562)
T PRK12492 259 EVMIAPLPLYHIYAFTANCMCMMVSGNHNVLITNPRDIPGFIKELGKWRFSALLGLNTLFVALMDH-PGFKDLDFSALKL 337 (562)
T ss_pred eEEEEecchHHHHHHHHHHHHHhhcCceEEEecCCcCHHHHHHHHHHhCCceeeCcHHHHHHHHhC-cCcccccccceeE
Confidence 56788999999999877777778888877665 456899999999999999999999999999887 4445567889999
Q ss_pred EEEccCCCcHHHHHHHHhhCCCCeEEeccCcccccccccccCCCCCCCCCCceeecCCCceEEEEeCCCCCCCCCCCcce
Q 043601 314 IGSGAAPLRKELVEECSKNLPTVTVFQGYGMTETCGVVTVENPLLGVQNSGSTGTLVAGVEAQIVCVDTLKPLPPNQVGE 393 (488)
Q Consensus 314 v~~~G~~l~~~~~~~~~~~~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d~~~~~~~~~g~~Ge 393 (488)
+++||+++++++.+.|.+.++ +++++.||+||++.+++..... .....+++|+|++++.++|+| +++++++.|+.||
T Consensus 338 ~~~gG~~~~~~~~~~~~~~~~-~~~~~~YG~tE~~~~~~~~~~~-~~~~~~~~G~p~~~~~v~ivd-~~~~~~~~g~~Ge 414 (562)
T PRK12492 338 TNSGGTALVKATAERWEQLTG-CTIVEGYGLTETSPVASTNPYG-ELARLGTVGIPVPGTALKVID-DDGNELPLGERGE 414 (562)
T ss_pred EEeccccCCHHHHHHHHHHhC-CceeeccCccccCceeeecCCc-ccccCCccceecCCCEEEEEC-CCCCCCCCCCceE
Confidence 999999999999999999886 9999999999998766544322 133457899999999999999 5789999999999
Q ss_pred EEEecC---------------------CccccceEEEccCCcEEEEcccCcceeeCcEEe---eHhHHHhcCCCeeeeEE
Q 043601 394 LWVRGP---------------------ILMPGDLGYFDEHGQLFIVDRIKELIKCNGFQV---ELEGVLVSHPEILDAVV 449 (488)
Q Consensus 394 l~v~g~---------------------~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v---~ie~~l~~~~~v~~~~v 449 (488)
|+|+|+ ||.|||+|+++++|.+++.||.+|+++.+|.+| +||..+.++|.|.+++|
T Consensus 415 l~v~g~~~~~gY~~~~~~t~~~~~~~g~~~TGD~g~~~~~G~l~i~GR~~~~i~~~G~~i~~~eIE~~l~~~~~v~~~~v 494 (562)
T PRK12492 415 LCIKGPQVMKGYWQQPEATAEALDAEGWFKTGDIAVIDPDGFVRIVDRKKDLIIVSGFNVYPNEIEDVVMAHPKVANCAA 494 (562)
T ss_pred EEEeCCccccccccCchhhhhcccCCCceecCcEEEECCCCeEEEecccCCeEEECCEEECHHHHHHHHHhCCCeeEEEE
Confidence 999974 688999999999999999999999999999999 99999999999999999
Q ss_pred EeecCCCCCceEEEEEEeCCCCCCCHHHHHHHHHhhcC
Q 043601 450 IPFPDPEAGEVPIAYVVRSPNSSLTKEDVQKFVANDSQ 487 (488)
Q Consensus 450 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~~~~~~l~ 487 (488)
++.++...++.++++++..++ ..+.++++++++++|+
T Consensus 495 ~~~~~~~~~~~~~~~v~~~~~-~~~~~~i~~~~~~~l~ 531 (562)
T PRK12492 495 IGVPDERSGEAVKLFVVARDP-GLSVEELKAYCKENFT 531 (562)
T ss_pred EeccCCCCCceEEEEEEeCCC-CCCHHHHHHHHHHhcc
Confidence 999988888899999887654 3577899999998875
No 69
>PRK13388 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.4e-56 Score=454.20 Aligned_cols=427 Identities=19% Similarity=0.250 Sum_probs=348.4
Q ss_pred CCHHHHHhhccccCCCceEEEeCCCCcceeHHHHHHHHHHHHHHHHHcCC-CCCCEEEEEcCCCcchHHHHHHHHHcCCe
Q 043601 27 LSMVHFLFRNSASYGSKSALIDADSGESLTFSQFKSIVIKVSHGFRHLGV-TKHDVVLIFAPNSIQFPICLLGVIAIGGI 105 (488)
Q Consensus 27 ~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~-~~g~~V~i~~~n~~~~~~~~lA~~~~G~~ 105 (488)
.|+.++|.+++ .|+++|+++. +..+||+||.++++++|..|.+.|+ ++|++|+++++|+++++++++||+++|++
T Consensus 3 ~~~~~~l~~~~--~p~~~Al~~~--~~~lTy~el~~~~~~la~~L~~~g~~~~~~~V~i~~~n~~~~v~~~lA~~~~Ga~ 78 (540)
T PRK13388 3 DTIAQLLRDRA--GDDTIAVRYG--DRTWTWREVLAEAAARAAALIALADPDRPLHVGVLLGNTPEMLFWLAAAALGGYV 78 (540)
T ss_pred hhHHHHHHhhc--cCCceEEEEC--CceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCcHHHHHHHHHHhCCCE
Confidence 46888888765 6999999986 7899999999999999999999999 89999999999999999999999999999
Q ss_pred EeecCCCCCHHHHHHHHhhcCCeEEEEccccHHHHhccC---CCeEEEcccCcccCCCCcCCCCccchHHHHhhcCCCCC
Q 043601 106 ATTANPVYTVSELSKQVKDSSPKLVVTVPELWERVKDFN---IPAVLLGSNHIVSPRGLRSSSNIVYFDELIELSGNASN 182 (488)
Q Consensus 106 ~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (488)
++|++|.++.+++..+++.++++++|++++....+.... ...+.+.. ..+.+++.... ..
T Consensus 79 ~v~l~p~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~---------------~~~~~~~~~~~--~~ 141 (540)
T PRK13388 79 LVGLNTTRRGAALAADIRRADCQLLVTDAEHRPLLDGLDLPGVRVLDVDT---------------PAYAELVAAAG--AL 141 (540)
T ss_pred EEEecccCChHHHHHHHHhcCCCEEEEChhhhHHHHhhcccCceEEEccc---------------hhhhhhhcccc--Cc
Confidence 999999999999999999999999999987766554432 11221110 01222222111 11
Q ss_pred CCCCCCCCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHhhhhhhcCCCCcEEEEecchhhHHhHHHHHHHHhhCCce
Q 043601 183 FPDVSVKQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTAMDQELAGALDYVTLCVLPMFHVFGLSFVVYAQLQKGNC 262 (488)
Q Consensus 183 ~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~ 262 (488)
.+.....++++++++|||||||.||+|.++|.++... .......+....+++++..+|++|..++...++.++..|++
T Consensus 142 ~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~--~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~~l~~G~~ 219 (540)
T PRK13388 142 TPHREVDAMDPFMLIFTSGTTGAPKAVRCSHGRLAFA--GRALTERFGLTRDDVCYVSMPLFHSNAVMAGWAPAVASGAA 219 (540)
T ss_pred CCCCCCCCCCeEEEEECCCCCCCCCEEEecHHHHHHH--HHHHHHHhCCCCCCEEEEeeCchhhcchHHHHHHHHHcCcE
Confidence 1222356799999999999999999999999999876 33345566778899999999999999886666678999999
Q ss_pred EEEcCCCCHHHHHHHHHhcCccEEEecHHHHHHHHhcCCccCCCCCCCccEEEEccCCCcHHHHHHHHhhCCCCeEEecc
Q 043601 263 VVSMRKFDLETALRAIEKYRVTHWWVVPPIILALAKNVSLVKKFDLSSLKGIGSGAAPLRKELVEECSKNLPTVTVFQGY 342 (488)
Q Consensus 263 ~~~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~i~~~Y 342 (488)
+++.+.+++..+++.+++++++++..+|..+..++.. .........+++. .+ |++++++..+.|.+.++ .++++.|
T Consensus 220 ~v~~~~~~~~~~~~~i~~~~vt~~~~~p~~l~~l~~~-~~~~~~~~~~l~~-~~-G~~~~~~~~~~~~~~~~-~~l~~~Y 295 (540)
T PRK13388 220 VALPAKFSASGFLDDVRRYGATYFNYVGKPLAYILAT-PERPDDADNPLRV-AF-GNEASPRDIAEFSRRFG-CQVEDGY 295 (540)
T ss_pred EEECCCCCHHHHHHHHHHhCCeEEEehHHHHHHHHhC-CCCccccccceEE-EE-CCCCCHHHHHHHHHHhC-Cceeccc
Confidence 9998888999999999999999999999999998875 3322223345664 33 56678889999999886 8999999
Q ss_pred CcccccccccccCCCCCCCCCCceeecCCCceEE-----------EEeCCCCCCC-CCCCcceEEEe-cC----------
Q 043601 343 GMTETCGVVTVENPLLGVQNSGSTGTLVAGVEAQ-----------IVCVDTLKPL-PPNQVGELWVR-GP---------- 399 (488)
Q Consensus 343 G~tE~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-----------i~d~~~~~~~-~~g~~Gel~v~-g~---------- 399 (488)
|+||++.++.... ....+++|+|++++.+. ++| ++|+.+ +.++.|||+++ |+
T Consensus 296 G~tE~~~~~~~~~----~~~~~~vG~p~~g~~i~~~~~~~~~~~~~~d-~~g~~~~~~~~~GEl~v~~g~~~~~gY~~~~ 370 (540)
T PRK13388 296 GSSEGAVIVVREP----GTPPGSIGRGAPGVAIYNPETLTECAVARFD-AHGALLNADEAIGELVNTAGAGFFEGYYNNP 370 (540)
T ss_pred ccccccceeecCC----CCCCCCCCCCCCCcEEEcCCCCccccceecc-CccccccCCCcceEEEEecCCcccccccCCh
Confidence 9999986654322 24567899999997642 233 344444 34678999998 53
Q ss_pred ----------CccccceEEEccCCcEEEEcccCcceeeCcEEe---eHhHHHhcCCCeeeeEEEeecCCCCCceEEEEEE
Q 043601 400 ----------ILMPGDLGYFDEHGQLFIVDRIKELIKCNGFQV---ELEGVLVSHPEILDAVVIPFPDPEAGEVPIAYVV 466 (488)
Q Consensus 400 ----------~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v---~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~ 466 (488)
||+|||+|++++||.+++.||++|+||++|++| +||+++.++|+|.+++|++.+++..++.++++++
T Consensus 371 ~~t~~~~~~g~~~TGD~~~~~~dg~l~i~GR~~d~i~~~G~~v~p~eIE~~l~~~~~V~~~~v~g~~~~~~g~~~~~~v~ 450 (540)
T PRK13388 371 EATAERMRHGMYWSGDLAYRDADGWIYFAGRTADWMRVDGENLSAAPIERILLRHPAINRVAVYAVPDERVGDQVMAALV 450 (540)
T ss_pred HHHHHHhhcCceeccceEEEcCCCcEEEeccCCceEEECCEEeCHHHHHHHHHhCCCceEEEEEEccCCCCCceeEEEEE
Confidence 789999999999999999999999999999999 9999999999999999999998888888999999
Q ss_pred eCCCCCCCHHHHHHHHHhh
Q 043601 467 RSPNSSLTKEDVQKFVAND 485 (488)
Q Consensus 467 ~~~~~~~~~~~i~~~~~~~ 485 (488)
+.++...+.++++++++.+
T Consensus 451 ~~~~~~~~~~~l~~~l~~~ 469 (540)
T PRK13388 451 LRDGATFDPDAFAAFLAAQ 469 (540)
T ss_pred ECCCCcCCHHHHHHHHHhh
Confidence 9888778889999999764
No 70
>PRK05857 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4.7e-57 Score=459.62 Aligned_cols=426 Identities=21% Similarity=0.295 Sum_probs=338.2
Q ss_pred CCCHHHHHhhccccCCCceEEEeCCCCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHHcCCe
Q 043601 26 NLSMVHFLFRNSASYGSKSALIDADSGESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQFPICLLGVIAIGGI 105 (488)
Q Consensus 26 ~~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~ 105 (488)
+.|+.+.|.++|+.+|+++|+++.++++.+||+||.++++++|+.|.+.|+++|++|+++++|++++++++|||+++|++
T Consensus 13 ~~~~~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~e~~~~~lA~~~~G~v 92 (540)
T PRK05857 13 PSTVLDRVFEQARQQPEAIALRRCDGTSALRYRELVAEVGGLAADLRAQSVSRGSRVLVISDNGPETYLSVLACAKLGAI 92 (540)
T ss_pred CcchHHHHHHHHhhCCCcEEEeecCCCceeeHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcCCCHHHHHHHHHHHHcCeE
Confidence 35899999999999999999987654578999999999999999999999999999999999999999999999999999
Q ss_pred EeecCCCCCHHHHHHHHhhcCCeEEEEccccHHHHhcc-----CCCeEEEcccCcccCCCCcCCCCccchHHHHhhcCCC
Q 043601 106 ATTANPVYTVSELSKQVKDSSPKLVVTVPELWERVKDF-----NIPAVLLGSNHIVSPRGLRSSSNIVYFDELIELSGNA 180 (488)
Q Consensus 106 ~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (488)
++|+++.++.+++.++++.++++.+|+++......... ..+.+.++... . .. .........
T Consensus 93 ~v~l~~~~~~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-------~~--~~~~~~~~~--- 158 (540)
T PRK05857 93 AVMADGNLPIAAIERFCQITDPAAALVAPGSKMASSAVPEALHSIPVIAVDIAA--V-------TR--ESEHSLDAA--- 158 (540)
T ss_pred EEecCccCCHHHHHHHHHhcCCceEEEeccchhccccccccccccceeEeeccc--c-------cc--ccccccccc---
Confidence 99999999999999999999999999997653222111 11111111100 0 00 000000000
Q ss_pred CCCCCCCCCCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHhh--hhhhcCCCCcEEEEecchhhHHhHHHHHHHHhh
Q 043601 181 SNFPDVSVKQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTAM--DQELAGALDYVTLCVLPMFHVFGLSFVVYAQLQ 258 (488)
Q Consensus 181 ~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 258 (488)
.........++++++++|||||||.||+|.+||.++.++...... ........+++.+..+|++|..++ ...+.++.
T Consensus 159 ~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~h~~~l-~~~~~~l~ 237 (540)
T PRK05857 159 SLAGNADQGSEDPLAMIFTSGTTGEPKAVLLANRTFFAVPDILQKEGLNWVTWVVGETTYSPLPATHIGGL-WWILTCLM 237 (540)
T ss_pred ccccccCCCCCCeEEEEeCCCCCCCCCeEEEechhhhhhhHHhhhccccccccccCceeeecCCccccchH-HHHHHHhh
Confidence 011123456789999999999999999999999998765321110 111234467889999999999998 56788899
Q ss_pred CCceEEEcCCCCHHHHHHHHHhcCccEEEecHHHHHHHHhcCCccCCCCCCCccEEEEccCCCcHHHHHHHHhhCCCCeE
Q 043601 259 KGNCVVSMRKFDLETALRAIEKYRVTHWWVVPPIILALAKNVSLVKKFDLSSLKGIGSGAAPLRKELVEECSKNLPTVTV 338 (488)
Q Consensus 259 ~G~~~~~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~i 338 (488)
.|+++++ .+.++..+++.++++++|+++++|+++..+++. ......+++++|.+++||++++....+ +.+.++ +++
T Consensus 238 ~G~~~v~-~~~~~~~~~~~i~~~~it~~~~~P~~~~~l~~~-~~~~~~~~~~lr~~~~gG~~~~~~~~~-~~~~~g-~~i 313 (540)
T PRK05857 238 HGGLCVT-GGENTTSLLEILTTNAVATTCLVPTLLSKLVSE-LKSANATVPSLRLVGYGGSRAIAADVR-FIEATG-VRT 313 (540)
T ss_pred cceeEEe-cCCChhHHHHHHHhcCcceEEeChHHHHHHHhc-cccCCCcCccceEEEEcCccCCchhHH-HHHHhC-Cee
Confidence 9998876 456789999999999999999999999999887 444456789999999999999988875 555675 999
Q ss_pred EeccCcccccccccccCCCC---CCCCCCceeecCCCceEEEEeCCCCCCC-----CCCCcceEEEecC-----------
Q 043601 339 FQGYGMTETCGVVTVENPLL---GVQNSGSTGTLVAGVEAQIVCVDTLKPL-----PPNQVGELWVRGP----------- 399 (488)
Q Consensus 339 ~~~YG~tE~~~~~~~~~~~~---~~~~~~~~g~~~~~~~~~i~d~~~~~~~-----~~g~~Gel~v~g~----------- 399 (488)
.+.||+||++.......... ...+.+++|+|+++++++|+|+++..++ +.|+.|||+|+|+
T Consensus 314 ~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~v~i~d~~~~~~~~~~~~~~~~~Gel~v~g~~~~~GY~~~~~ 393 (540)
T PRK05857 314 AQVYGLSETGCTALCLPTDDGSIVKIEAGAVGRPYPGVDVYLAATDGIGPTAPGAGPSASFGTLWIKSPANMLGYWNNPE 393 (540)
T ss_pred ecccCCCcCCceeeecccccccccccccCCcCcccCCcEEEEECccccCccccccCCCCCcceEEEeCcchhhhhhCCcc
Confidence 99999999985433322111 0224578999999999999995433333 4578999999996
Q ss_pred ---------CccccceEEEccCCcEEEEcccCcceeeCcEEe---eHhHHHhcCCCeeeeEEEeecCCCCCceEEEEEEe
Q 043601 400 ---------ILMPGDLGYFDEHGQLFIVDRIKELIKCNGFQV---ELEGVLVSHPEILDAVVIPFPDPEAGEVPIAYVVR 467 (488)
Q Consensus 400 ---------~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v---~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~ 467 (488)
|++|||+|+++++|++++.||.+|+||.+|.+| +||.++..||+|.+++|++.++...++.++++|+.
T Consensus 394 ~t~~~~~~g~~~TGDlg~~d~~g~l~~~GR~~~~ik~~G~~v~p~eIE~~l~~~~~V~~~~v~~~~~~~~~~~~~~~vv~ 473 (540)
T PRK05857 394 RTAEVLIDGWVNTGDLLERREDGFFYIKGRSSEMIICGGVNIAPDEVDRIAEGVSGVREAACYEIPDEEFGALVGLAVVA 473 (540)
T ss_pred chhhhcCCCceeccceEEEcCCceEEEeccccccEecCCEEECHHHHHHHHHhCCCeeEEEEEecCccccccceEEEEEe
Confidence 688999999999999999999999999999999 99999999999999999999988778888888887
Q ss_pred CCC
Q 043601 468 SPN 470 (488)
Q Consensus 468 ~~~ 470 (488)
.++
T Consensus 474 ~~~ 476 (540)
T PRK05857 474 SAE 476 (540)
T ss_pred CCC
Confidence 654
No 71
>PRK08180 feruloyl-CoA synthase; Reviewed
Probab=100.00 E-value=2.4e-57 Score=467.89 Aligned_cols=438 Identities=21% Similarity=0.240 Sum_probs=341.9
Q ss_pred CCCHHHHHhhccccCCCceEEEeCC---CCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHHc
Q 043601 26 NLSMVHFLFRNSASYGSKSALIDAD---SGESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQFPICLLGVIAI 102 (488)
Q Consensus 26 ~~~l~~~l~~~a~~~p~~~a~~~~~---~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~ 102 (488)
+.|+.+.|.++++++|+++|+++.+ ..+++||+||.++++++|++|.+.|+++||+|+++++|+++|++++|||+++
T Consensus 38 ~~~l~~~l~~~a~~~p~~~a~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~Gv~~gd~Vai~~~n~~e~~~~~lA~~~~ 117 (614)
T PRK08180 38 PRRLTDRLVHWAQEAPDRVFLAERGADGGWRRLTYAEALERVRAIAQALLDRGLSAERPLMILSGNSIEHALLALAAMYA 117 (614)
T ss_pred CccHHHHHHHHHHHCCCCceeeeccCCCceeEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHHHHHHHHHHc
Confidence 4689999999999999999998642 1278999999999999999999999999999999999999999999999999
Q ss_pred CCeEeecCCCCC-----HHHHHHHHhhcCCeEEEEcccc--HHHHhcc---CCCeEEEcccCcccCCCCcCCCCccchHH
Q 043601 103 GGIATTANPVYT-----VSELSKQVKDSSPKLVVTVPEL--WERVKDF---NIPAVLLGSNHIVSPRGLRSSSNIVYFDE 172 (488)
Q Consensus 103 G~~~v~l~~~~~-----~~~l~~~l~~~~~~~vi~~~~~--~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (488)
|++++|++|.++ .+++.++++.++++++|+++.. ...+... ....+..... ........+++
T Consensus 118 Gav~vpl~~~~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~i~~~~~--------~~~~~~~~~~~ 189 (614)
T PRK08180 118 GVPYAPVSPAYSLVSQDFGKLRHVLELLTPGLVFADDGAAFARALAAVVPADVEVVAVRGA--------VPGRAATPFAA 189 (614)
T ss_pred CCeEeeeccccccccCCHHHHHHHHhcCCCcEEEEcCHHHHHHHHhhhccCCceEEEecCC--------CCCcccccHHH
Confidence 999999999998 7899999999999999998642 2222211 1112221110 00111234555
Q ss_pred HHhhcCCCC-CCCCCCCCCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHhhhhhhcC--CCCcEEEEecchhhHHhH
Q 043601 173 LIELSGNAS-NFPDVSVKQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTAMDQELAG--ALDYVTLCVLPMFHVFGL 249 (488)
Q Consensus 173 ~~~~~~~~~-~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 249 (488)
+........ ........++++++|+|||||||.||+|++||.++...... ....+.. ...+++++.+|++|.+++
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~a~ilyTSGTTG~PKgV~~sh~~l~~~~~~--~~~~~~~~~~~~~~~l~~lPl~h~~g~ 267 (614)
T PRK08180 190 LLATPPTAAVDAAHAAVGPDTIAKFLFTSGSTGLPKAVINTHRMLCANQQM--LAQTFPFLAEEPPVLVDWLPWNHTFGG 267 (614)
T ss_pred HhccccccchhhhccCCCcCceEEEEECCCCCCCCCEEEeehHHHHHHHHH--HHhhccccCCCCcEEEEecchHHHhhH
Confidence 554321100 11112346789999999999999999999999999876332 2233332 256899999999999998
Q ss_pred HHHHHHHhhCCceEEEcCC-CC---HHHHHHHHHhcCccEEEecHHHHHHHHhcCCcc---CCCCCCCccEEEEccCCCc
Q 043601 250 SFVVYAQLQKGNCVVSMRK-FD---LETALRAIEKYRVTHWWVVPPIILALAKNVSLV---KKFDLSSLKGIGSGAAPLR 322 (488)
Q Consensus 250 ~~~~~~~l~~G~~~~~~~~-~~---~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~---~~~~l~~lr~v~~~G~~l~ 322 (488)
...++.++..|+++++.+. ++ +..+++.++++++|+++++|.++..|++..... ...++++||.+++||++++
T Consensus 268 ~~~~~~~l~~G~~v~~~~~~~~~~~~~~~l~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~~~~~~lr~v~~gGa~l~ 347 (614)
T PRK08180 268 NHNLGIVLYNGGTLYIDDGKPTPGGFDETLRNLREISPTVYFNVPKGWEMLVPALERDAALRRRFFSRLKLLFYAGAALS 347 (614)
T ss_pred HHHHHHHHhcCCEEEEeCCCccchhHHHHHHHHHHhCCcEEechHHHHHHHHHHHHhchhhhhhhccceeEEEEccCCCC
Confidence 7788899999999998753 33 356788999999999999999999988752211 2245789999999999999
Q ss_pred HHHHHHHHhh----CC-CCeEEeccCcccccccccccCCCCCCCCCCceeecCCCceEEEEeCCCCCCCCCCCcceEEEe
Q 043601 323 KELVEECSKN----LP-TVTVFQGYGMTETCGVVTVENPLLGVQNSGSTGTLVAGVEAQIVCVDTLKPLPPNQVGELWVR 397 (488)
Q Consensus 323 ~~~~~~~~~~----~~-~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~ 397 (488)
+++.+.+.+. ++ ++.+++.||+||++++++..... ....+++|+|+++++++++|. |+.|||+++
T Consensus 348 ~~~~~~~~~~~~~~~g~~~~l~~~YG~TE~~~~~~~~~~~--~~~~~svG~p~pg~~v~i~d~--------~~~GEi~vr 417 (614)
T PRK08180 348 QDVWDRLDRVAEATCGERIRMMTGLGMTETAPSATFTTGP--LSRAGNIGLPAPGCEVKLVPV--------GGKLEVRVK 417 (614)
T ss_pred HHHHHHHHHHHHhhcCCCceeeeeecccccCCceEecccc--cCCCCcccCccCCcEEEEecC--------CCCcEEEEe
Confidence 9999999875 33 37899999999998766544332 346789999999999999873 445899998
Q ss_pred cC---------------------CccccceEEE----ccCCcEEEEcccCcceee-CcEEe-----eHhHHHhcCCCeee
Q 043601 398 GP---------------------ILMPGDLGYF----DEHGQLFIVDRIKELIKC-NGFQV-----ELEGVLVSHPEILD 446 (488)
Q Consensus 398 g~---------------------~~~tGD~~~~----~~~g~l~~~GR~~d~i~~-~G~~v-----~ie~~l~~~~~v~~ 446 (488)
|+ |++|||+|++ +++|++++.||++|+|++ +|++| ++|.++.+||.|++
T Consensus 418 g~~v~~GY~~~p~~t~~~~~~dgw~~TGDlg~~~~~~d~~g~l~i~GR~~d~i~~~~G~~i~~~p~Eie~~l~~~p~V~~ 497 (614)
T PRK08180 418 GPNVTPGYWRAPELTAEAFDEEGYYRSGDAVRFVDPADPERGLMFDGRIAEDFKLSSGTWVSVGPLRARAVSAGAPLVQD 497 (614)
T ss_pred cCccchhhcCChhHhHhhcccCCceeccceEEecCCcCCCCceEEecchhhhEEcCCCcEecchhhhHHHHhhcCchhhe
Confidence 74 7899999999 468999999999999886 79876 77888899999999
Q ss_pred eEEEeecCCCCCceEEEEEEeCCCC---------------CCCHHHHHHHHHhhcC
Q 043601 447 AVVIPFPDPEAGEVPIAYVVRSPNS---------------SLTKEDVQKFVANDSQ 487 (488)
Q Consensus 447 ~~v~~~~~~~~~~~~~~~v~~~~~~---------------~~~~~~i~~~~~~~l~ 487 (488)
++|++.+++ .+.++|+++++. ..+.++|+++++++|+
T Consensus 498 a~V~g~~~~----~~~a~V~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~ 549 (614)
T PRK08180 498 VVITGHDRD----EIGLLVFPNLDACRRLAGLLADASLAEVLAHPAVRAAFRERLA 549 (614)
T ss_pred EEEEcCCCC----ceEEEEEcCHHHHHHHHhhcccCCHHHHhcCHHHHHHHHHHHH
Confidence 999998765 577888887542 1345678888877663
No 72
>PRK12467 peptide synthase; Provisional
Probab=100.00 E-value=1.8e-57 Score=541.06 Aligned_cols=431 Identities=23% Similarity=0.302 Sum_probs=370.3
Q ss_pred CCHHHHHhhccccCCCceEEEeCCCCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHHcCCeE
Q 043601 27 LSMVHFLFRNSASYGSKSALIDADSGESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQFPICLLGVIAIGGIA 106 (488)
Q Consensus 27 ~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~ 106 (488)
.++.++|.++++++|+++|+++. ++++||+||+++++++|+.|.+.|+++|++|+++++|++++++++|||+++|+++
T Consensus 3095 ~~~~~l~~~~a~~~p~~~Av~~~--~~~lTY~eL~~~a~~lA~~L~~~gv~~g~~V~l~~~~s~~~vv~~lavl~aGa~~ 3172 (3956)
T PRK12467 3095 RLVHQLIEAQVARTPEAPALVFG--DQQLSYAELNRRANRLAHRLIAIGVGPDVLVGVAVERSVEMIVALLAVLKAGGAY 3172 (3956)
T ss_pred ccHHHHHHHHHHhCCCcceEeeC--CcccCHHHHHHHHHHHHHHHHHcCCCCCCeEEEEeCCCHHHHHHHHHHHhhCcEe
Confidence 68999999999999999999997 7899999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCHHHHHHHHhhcCCeEEEEccccHHHHhccC-CCeEEEcccCcccCCCCcCCCCccchHHHHhhcCCCCCCCC
Q 043601 107 TTANPVYTVSELSKQVKDSSPKLVVTVPELWERVKDFN-IPAVLLGSNHIVSPRGLRSSSNIVYFDELIELSGNASNFPD 185 (488)
Q Consensus 107 v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (488)
+|++|.++.+++.++++.+++++++++......+.... ...+.++. ...... ....+.
T Consensus 3173 vpld~~~p~~rl~~il~~~~~~~vlt~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~-~~~~~~ 3231 (3956)
T PRK12467 3173 VPLDPEYPRERLAYMIEDSGVKLLLTQAHLLEQLPAPAGDTALTLDR--------------------LDLNGY-SENNPS 3231 (3956)
T ss_pred ecCCCCChHHHHHHHHhCCCCcEEEechhhhhhcccccCCceeeecc--------------------hhhccc-CCCCCc
Confidence 99999999999999999999999999987655543221 11111110 000000 012222
Q ss_pred CCCCCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHhhhhhhcCCCCcEEEEecchhhHHhHHHHHHHHhhCCceEEE
Q 043601 186 VSVKQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTAMDQELAGALDYVTLCVLPMFHVFGLSFVVYAQLQKGNCVVS 265 (488)
Q Consensus 186 ~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~ 265 (488)
....++++++|+|||||||.||||+++|+++.+. .......+...++++++...|++|..+. ..++.+|..|+++++
T Consensus 3232 ~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~--~~~~~~~~~~~~~d~~l~~~~~~fd~~~-~~~~~~L~~G~~l~i 3308 (3956)
T PRK12467 3232 TRVMGENLAYVIYTSGSTGKPKGVGVRHGALANH--LCWIAEAYELDANDRVLLFMSFSFDGAQ-ERFLWTLICGGCLVV 3308 (3956)
T ss_pred ccCCCCceEEEEEccCCCCCcceeeehhHHHHHH--HHHHHHhcCCCcCCEEEEecCccHhHHH-HHHHHHHhCCCEEEE
Confidence 3457889999999999999999999999999887 4445566778899999999999999887 788999999999999
Q ss_pred cCC--CCHHHHHHHHHhcCccEEEecHHHHHHHHhcCCccCCCCCCCccEEEEccCCCcHHHHHHHHhhCCCCeEEeccC
Q 043601 266 MRK--FDLETALRAIEKYRVTHWWVVPPIILALAKNVSLVKKFDLSSLKGIGSGAAPLRKELVEECSKNLPTVTVFQGYG 343 (488)
Q Consensus 266 ~~~--~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~i~~~YG 343 (488)
.+. +++..+++.++++++|++.++|+++..+++. ....++++||.+++|||++++++.++|.+.++++.+++.||
T Consensus 3309 ~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~l~~l~~~---~~~~~~~~lr~~~~gGe~~~~~~~~~~~~~~~~~~l~n~YG 3385 (3956)
T PRK12467 3309 RDNDLWDPEELWQAIHAHRISIACFPPAYLQQFAED---AGGADCASLDIYVFGGEAVPPAAFEQVKRKLKPRGLTNGYG 3385 (3956)
T ss_pred CCcccCCHHHHHHHHHHcCCEEEEcCHHHHHHHHhc---ccccCCCCceEEEEecCCCCHHHHHHHHHhCCCCEEEeCcc
Confidence 875 7899999999999999999999999999864 22346788999999999999999999999888789999999
Q ss_pred cccccccccccCCCC---CCCCCCceeecCCCceEEEEeCCCCCCCCCCCcceEEEecC---------------------
Q 043601 344 MTETCGVVTVENPLL---GVQNSGSTGTLVAGVEAQIVCVDTLKPLPPNQVGELWVRGP--------------------- 399 (488)
Q Consensus 344 ~tE~~~~~~~~~~~~---~~~~~~~~g~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~--------------------- 399 (488)
+||+++.++...... ......++|+|++++.++|+| +++++++.|+.|||+|+|+
T Consensus 3386 ~TE~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d-~~~~~vp~G~~GEL~i~G~~v~~GY~~~~~~T~~~F~~~p 3464 (3956)
T PRK12467 3386 PTEAVVTVTLWKCGGDAVCEAPYAPIGRPVAGRSIYVLD-GQLNPVPVGVAGELYIGGVGLARGYHQRPSLTAERFVADP 3464 (3956)
T ss_pred cchhEeeeEEEecccccccCCCCCCCccccCCCEEEEEC-CCCCCCCCCCCceEEEcchhhhhhccCCcccchhhccCCC
Confidence 999987665433211 122346899999999999999 6899999999999999885
Q ss_pred -------CccccceEEEccCCcEEEEcccCcceeeCcEEe---eHhHHHhcCCCeeeeEEEeecCCCCCceEEEEEEeCC
Q 043601 400 -------ILMPGDLGYFDEHGQLFIVDRIKELIKCNGFQV---ELEGVLVSHPEILDAVVIPFPDPEAGEVPIAYVVRSP 469 (488)
Q Consensus 400 -------~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v---~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~ 469 (488)
||+|||+|++++||.++++||+||+||++|++| |||++|.++|+|.+++|++... ..++.++++|+..+
T Consensus 3465 ~~~~g~r~yrTGDl~~~~~dG~l~~~GR~d~~iki~G~rIe~~EIE~~l~~~p~V~~a~v~~~~~-~~~~~lva~v~~~~ 3543 (3956)
T PRK12467 3465 FSGSGGRLYRTGDLARYRADGVIEYLGRIDHQVKIRGFRIELGEIEARLLQHPSVREAVVLARDG-AGGKQLVAYVVPAD 3543 (3956)
T ss_pred CCCCCceeeccchhheecCCCcEEEeccccceEeeceEeecHHHHHHHHhhCcccceEEEEEecC-CCCcEEEEEEeCCC
Confidence 389999999999999999999999999999999 9999999999999999998754 46789999999887
Q ss_pred CCCCCHHHHHHHHHhhcCC
Q 043601 470 NSSLTKEDVQKFVANDSQL 488 (488)
Q Consensus 470 ~~~~~~~~i~~~~~~~l~~ 488 (488)
......++++++++++||.
T Consensus 3544 ~~~~~~~~l~~~l~~~Lp~ 3562 (3956)
T PRK12467 3544 PQGDWRETLRDHLAASLPD 3562 (3956)
T ss_pred CCcccHHHHHHHHhccCCh
Confidence 6667789999999999873
No 73
>TIGR03205 pimA dicarboxylate--CoA ligase PimA. PimA, a member of a large family of acyl-CoA ligases, is found in a characteristic operon pimFABCDE for the metabolism of pimelate and related compounds. It is found, so far, in Bradyrhizobium japonicum and several strains of Rhodopseudomonas palustris. PimA from R. palustris was shown to be active as a CoA ligase for C(7) to C(14) dicarboxylates and fatty acids.
Probab=100.00 E-value=1.5e-55 Score=449.46 Aligned_cols=455 Identities=29% Similarity=0.505 Sum_probs=366.1
Q ss_pred CCCHHHHHhhccccCCCceEEEeCCCCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHHcCCe
Q 043601 26 NLSMVHFLFRNSASYGSKSALIDADSGESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQFPICLLGVIAIGGI 105 (488)
Q Consensus 26 ~~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~ 105 (488)
+.|+.++|.++++.+|+++|+.+. ++.+||.||.++++++|++|.+.|+++|++|+++++|++++++++|||+++|++
T Consensus 20 ~~~~~~~~~~~~~~~p~~~a~~~~--~~~~ty~el~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~~~~~la~~~~G~~ 97 (541)
T TIGR03205 20 RGTLPDLLSKAAADYGPRPALEFR--DRPITYTELEAMAETAAAALLRAGYGKDASVALYLGNTPDHPINFFGALKAGAR 97 (541)
T ss_pred CCCHHHHHHHHHHHcCCCceEEEC--CcEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHhcCeE
Confidence 348999999999999999999886 689999999999999999999999999999999999999999999999999999
Q ss_pred EeecCCCCCHHHHHHHHhhcCCeEEEEcccc--HHHHhc---cC-CCeEEEcccCcccCC-----CCcCCCCccchHHHH
Q 043601 106 ATTANPVYTVSELSKQVKDSSPKLVVTVPEL--WERVKD---FN-IPAVLLGSNHIVSPR-----GLRSSSNIVYFDELI 174 (488)
Q Consensus 106 ~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~--~~~~~~---~~-~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~ 174 (488)
++|++|.++..++.++++.++++++|+++.. ...+.. .. ...+++......... ..........+++++
T Consensus 98 ~v~l~~~~~~~~l~~~i~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (541)
T TIGR03205 98 VVHLSPLDGERALSHKLSDSGARLLITSDLAALLPMALKFLEKGLLDRLIVCEDDNWGKVGTPQAPIPADPRIVTYADFV 177 (541)
T ss_pred EEecCCCCCHHHHHHHHhhcCceEEEEeCchhhhHHHHHhhhcccceEEEEecccccccccccccccCCCcccccHHHHH
Confidence 9999999999999999999999999998632 111111 11 111211111110000 001112234455555
Q ss_pred hhcCCCCCCCCCCCCCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHhhhh---hhcCCCCcEEEEecchhhHHhHHH
Q 043601 175 ELSGNASNFPDVSVKQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTAMDQ---ELAGALDYVTLCVLPMFHVFGLSF 251 (488)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 251 (488)
.... .........++++++++|||||||.||+|+++|.++........... .......+.+++..|++|.+++..
T Consensus 178 ~~~~--~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~ 255 (541)
T TIGR03205 178 KGAA--APAEWPAVTPDDVALLQYTGGTTGLPKGAMLTHGNLTSAVSIYDVWGKPSRATRGDVERVICVLPLFHIYALTV 255 (541)
T ss_pred hcCC--CCCCCCCCCccCeEEEEECCCCCCCCcEEEEeHHHHHHHHHHHHhhcccccccCCCCceEEEeccHHHHHHHHH
Confidence 4322 12222345678999999999999999999999999875422110000 111233478899999999999877
Q ss_pred HHHHHhhCCceEEEcCCCCHHHHHHHHHhcCccEEEecHHHHHHHHhcCCccCCCCCCCccEEEEccCCCcHHHHHHHHh
Q 043601 252 VVYAQLQKGNCVVSMRKFDLETALRAIEKYRVTHWWVVPPIILALAKNVSLVKKFDLSSLKGIGSGAAPLRKELVEECSK 331 (488)
Q Consensus 252 ~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~ 331 (488)
.++.++..|+++++...+++..+++.|+++++|++.++|+++..+++. ......+++++|.+++||+++++++.+.+.+
T Consensus 256 ~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~-~~~~~~~~~~l~~i~~gg~~~~~~~~~~~~~ 334 (541)
T TIGR03205 256 ILLRSLRRGDLISLHQRFDVAAVFRDIEEKRATVFPGVPTMWIALAND-PSLEKRDLSSLATIGSGGAPLPVEVANFFER 334 (541)
T ss_pred HHHHHHhcCCEEEecCCCCHHHHHHHHHHcCCeEeechHHHHHHHHhC-ccccccCccccceEEEccccCCHHHHHHHHH
Confidence 788899999999988888999999999999999999999999998875 3334456789999999999999999999988
Q ss_pred hCCCCeEEeccCcccccccccccCCCCCCCCCCceeecCCCceEEEEe-CCCCCCCCCCCcceEEEecC-----------
Q 043601 332 NLPTVTVFQGYGMTETCGVVTVENPLLGVQNSGSTGTLVAGVEAQIVC-VDTLKPLPPNQVGELWVRGP----------- 399 (488)
Q Consensus 332 ~~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d-~~~~~~~~~g~~Gel~v~g~----------- 399 (488)
.++ ..+++.||+||++..++..... .....+++|.|++++.+++.+ .+++++++.|+.|||+++|+
T Consensus 335 ~~~-~~~~~~YG~TE~~~~~~~~~~~-~~~~~~~~G~~~~~~~~~v~~~d~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~ 412 (541)
T TIGR03205 335 KTG-LKLKSGWGMTETCSPGTGHPPE-GPDKPGSIGLMLPGIELDVVSLDDPTKVLPPGEVGELRIRGPNVTRGYWNRPE 412 (541)
T ss_pred HhC-CCeecccccccCCcccccCCCC-CCCCCCCcceeccCceeEEEecCCCCccCCCCCeeEEEEecCCccccccCChh
Confidence 886 8999999999998766544322 123456899999999998865 25678899999999999985
Q ss_pred ---------CccccceEEEccCCcEEEEcccCcceeeCcEEe---eHhHHHhcCCCeeeeEEEeecCCCCCceEEEEEEe
Q 043601 400 ---------ILMPGDLGYFDEHGQLFIVDRIKELIKCNGFQV---ELEGVLVSHPEILDAVVIPFPDPEAGEVPIAYVVR 467 (488)
Q Consensus 400 ---------~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v---~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~ 467 (488)
|+.|||+++++++|++++.||.+|+||.+|.+| +||.++.+++.|.+++|++.+++..++.+++++++
T Consensus 413 ~~~~~~~~~~~~TGD~~~~~~~g~l~i~GR~~~~i~~~G~~i~~~eIE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~ 492 (541)
T TIGR03205 413 ESAEAFVGDRFLTGDIGYMDTDGYFFLVDRKKDMIISGGFNVYPQMIEQAIYEHPGVQEVIVIGIPDQYRGEAAKAFVKL 492 (541)
T ss_pred hhHhhhccCCcccCceEEEcCCceEEEEccccCeEEECCEEECHHHHHHHHHhCCCeeeEEEEecCCcccCceEEEEEEE
Confidence 478999999999999999999999999999999 99999999999999999999988888899999998
Q ss_pred CCCC-CCCHHHHHHHHHhhcC
Q 043601 468 SPNS-SLTKEDVQKFVANDSQ 487 (488)
Q Consensus 468 ~~~~-~~~~~~i~~~~~~~l~ 487 (488)
+++. ..+.++++++++++|+
T Consensus 493 ~~~~~~~~~~~l~~~~~~~l~ 513 (541)
T TIGR03205 493 RPGAKPFSLDELRAFLAGKLG 513 (541)
T ss_pred CCCCCcCCHHHHHHHHHhhcc
Confidence 8764 3578899999999886
No 74
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=5.4e-56 Score=455.60 Aligned_cols=457 Identities=25% Similarity=0.340 Sum_probs=368.5
Q ss_pred CCCCCHHHHHhhccccCCCceEEEeCC-CCcceeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCCcchHHHHHHHHH
Q 043601 24 DPNLSMVHFLFRNSASYGSKSALIDAD-SGESLTFSQFKSIVIKVSHGFRH-LGVTKHDVVLIFAPNSIQFPICLLGVIA 101 (488)
Q Consensus 24 ~~~~~l~~~l~~~a~~~p~~~a~~~~~-~~~~~Ty~el~~~~~~la~~L~~-~g~~~g~~V~i~~~n~~~~~~~~lA~~~ 101 (488)
..++|+.++|...++.+|++.|+.+.+ .++.+||+||+++++++|.+|.+ .|+++||+|+++++|+++++++++||++
T Consensus 7 ~~~~~~~~~l~~~a~~~~~~~a~~~~~~~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~~~~~n~~e~~~~~lA~~~ 86 (576)
T PRK05620 7 DVPLSLTRILEYGSTVHGDTTVTTWGGAEQEQTTFAAIGARAAALAHALHDELGITGDQRVGSMMYNCAEHLEVLFAVAC 86 (576)
T ss_pred cCCCcHHHHHHHHHHhCCCceEEEEcCCceEEEeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeCCCHHHHHHHHHHHh
Confidence 345899999999999999999997642 34799999999999999999986 7999999999999999999999999999
Q ss_pred cCCeEeecCCCCCHHHHHHHHhhcCCeEEEEccccHHHHhcc-----CCCeEEEcccCccc--CCCCcCCCCccchHHHH
Q 043601 102 IGGIATTANPVYTVSELSKQVKDSSPKLVVTVPELWERVKDF-----NIPAVLLGSNHIVS--PRGLRSSSNIVYFDELI 174 (488)
Q Consensus 102 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~-----~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 174 (488)
+|++++|++|.++.+++.++++.++++.+|+++.....+... ....+++....... .........+.+++++.
T Consensus 87 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 166 (576)
T PRK05620 87 MGAVFNPLNKQLMNDQIVHIINHAEDEVIVADPRLAEQLGEILKECPCVRAVVFIGPSDADSAAAHMPEGIKVYSYEALL 166 (576)
T ss_pred cCCEEeecccccCHHHHHHHHhccCCcEEEEChhhHHHHHHHHhhCccccEEEEecCcccccchhccccccccccHHHHh
Confidence 999999999999999999999999999999998766554332 11222221111100 00111122344577766
Q ss_pred hhcCCCCCCCCCCCCCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHhhhhhhcCCCCcEEEEecchhhHHhHHHHHH
Q 043601 175 ELSGNASNFPDVSVKQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTAMDQELAGALDYVTLCVLPMFHVFGLSFVVY 254 (488)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (488)
+... .........++++++++|||||||.||+|+++|.++............+....++++++.+|++|.+++ ...+
T Consensus 167 ~~~~--~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~-~~~~ 243 (576)
T PRK05620 167 DGRS--TVYDWPELDETTAAAICYSTGTTGAPKGVVYSHRSLYLQSLSLRTTDSLAVTHGESFLCCVPIYHVLSW-GVPL 243 (576)
T ss_pred hcCC--CcCCCCCCCccceeEEEECCCCCCCCceEEEEcHHHHHHHHHhhhhhhcCCCCCCeEEEeCChHHhhhh-HHHH
Confidence 5322 222233456789999999999999999999999998655322222334556788999999999999998 5678
Q ss_pred HHhhCCceEEEcC-CCCHHHHHHHHHhcCccEEEecHHHHHHHHhcCCccCCCCCCCccEEEEccCCCcHHHHHHHHhhC
Q 043601 255 AQLQKGNCVVSMR-KFDLETALRAIEKYRVTHWWVVPPIILALAKNVSLVKKFDLSSLKGIGSGAAPLRKELVEECSKNL 333 (488)
Q Consensus 255 ~~l~~G~~~~~~~-~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~ 333 (488)
.++..|+++++.. .+++..+++.+++++++.++++|+++..++.. ......+..++|.+++||+++++++.+.|.+.+
T Consensus 244 ~~l~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~-~~~~~~~~~~l~~~~~gG~~~~~~~~~~~~~~~ 322 (576)
T PRK05620 244 AAFMSGTPLVFPGPDLSAPTLAKIIATAMPRVAHGVPTLWIQLMVH-YLKNPPERMSLQEIYVGGSAVPPILIKAWEERY 322 (576)
T ss_pred HHHhcCceEEecCCCCCHHHHHHHHHHhcCceeeecCHHHHHHHHH-hhccCcccCceeEEEEcCCCCCHHHHHHHHHHh
Confidence 8899999998875 47899999999999999999999999988865 222233456899999999999999999999988
Q ss_pred CCCeEEeccCcccccccccccCCCCC------CCCCCceeecCCCceEEEEeCCCCCCCC--CCCcceEEEecC------
Q 043601 334 PTVTVFQGYGMTETCGVVTVENPLLG------VQNSGSTGTLVAGVEAQIVCVDTLKPLP--PNQVGELWVRGP------ 399 (488)
Q Consensus 334 ~~~~i~~~YG~tE~~~~~~~~~~~~~------~~~~~~~g~~~~~~~~~i~d~~~~~~~~--~g~~Gel~v~g~------ 399 (488)
+ +++++.||+||++..+....+... .....++|++.+++.++++| + ++.++ .++.|||+++|+
T Consensus 323 ~-~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~-~-g~~~~~~~~~~Gel~v~g~~~~~gY 399 (576)
T PRK05620 323 G-VDVVHVWGMTETSPVGTVARPPSGVSGEARWAYRVSQGRFPASLEYRIVN-D-GQVMESTDRNEGEIQVRGNWVTASY 399 (576)
T ss_pred C-CceeeeccccccccceeeeccCCccccccccccccccCCcCCceeEEEec-C-CccccCCCCCceEEEEEcCcccccc
Confidence 6 899999999999876554332210 11234789999999999998 3 66654 468899999874
Q ss_pred -------------------------------CccccceEEEccCCcEEEEcccCcceeeCcEEe---eHhHHHhcCCCee
Q 043601 400 -------------------------------ILMPGDLGYFDEHGQLFIVDRIKELIKCNGFQV---ELEGVLVSHPEIL 445 (488)
Q Consensus 400 -------------------------------~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v---~ie~~l~~~~~v~ 445 (488)
||+|||++++++||.+++.||.+|+|+.+|.+| +||.++.++|.|.
T Consensus 400 ~~~~~~t~~~~~~~f~~~~~~~~~~~~~~~g~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~i~~~eIE~~l~~~p~v~ 479 (576)
T PRK05620 400 YHSPTEEGGGAASTFRGEDVEDANDRFTADGWLRTGDVGSVTRDGFLTIHDRARDVIRSGGEWIYSAQLENYIMAAPEVV 479 (576)
T ss_pred cCCccccccccccccccccchhhhcccccCCcEecCceEEEcCCceEEEEechhhhhhcCCEEEcHHHHHHHHhcCCCce
Confidence 678999999999999999999999999999999 9999999999999
Q ss_pred eeEEEeecCCCCCceEEEEEEeCCCCC---CCHHHHHHHHHhhcC
Q 043601 446 DAVVIPFPDPEAGEVPIAYVVRSPNSS---LTKEDVQKFVANDSQ 487 (488)
Q Consensus 446 ~~~v~~~~~~~~~~~~~~~v~~~~~~~---~~~~~i~~~~~~~l~ 487 (488)
+++|++.+++..++.++++++..++.. .+.++++++++++|+
T Consensus 480 ~~~vv~~~~~~~g~~~~a~v~~~~~~~~~~~~~~~l~~~l~~~L~ 524 (576)
T PRK05620 480 ECAVIGYPDDKWGERPLAVTVLAPGIEPTRETAERLRDQLRDRLP 524 (576)
T ss_pred EEEEEeccCCCcCceeEEEEEecCCCCcccccHHHHHHHHHhhCc
Confidence 999999999888899999999887643 357899999999886
No 75
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=100.00 E-value=1.4e-56 Score=501.04 Aligned_cols=435 Identities=19% Similarity=0.280 Sum_probs=363.5
Q ss_pred CCCCHHHHHhhccccCCCceEEEeCCCCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHHcCC
Q 043601 25 PNLSMVHFLFRNSASYGSKSALIDADSGESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQFPICLLGVIAIGG 104 (488)
Q Consensus 25 ~~~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~ 104 (488)
|..++.++|.++++.+|+++|+++. ++.+||+||.++++++|+.|.+.|+++|++|+++++|++++++++|||+++|+
T Consensus 456 ~~~~l~~~~~~~~~~~p~~~Al~~~--~~~~Ty~eL~~~~~~la~~L~~~g~~~g~~V~l~~~~~~~~i~~~la~~~~G~ 533 (1296)
T PRK10252 456 PETTLSALVAQQAAKTPDAPALADA--RYQFSYREMREQVVALANLLRERGVKPGDSVAVALPRSVFLTLALHAIVEAGA 533 (1296)
T ss_pred CcCCHHHHHHHHHHhCCCCeEEEcC--CCcEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhCC
Confidence 3468999999999999999999987 78999999999999999999999999999999999999999999999999999
Q ss_pred eEeecCCCCCHHHHHHHHhhcCCeEEEEccccHHHHhccCCCeEEEcccCcccCCCCcCCCCccchHHHHhhcCCCCCCC
Q 043601 105 IATTANPVYTVSELSKQVKDSSPKLVVTVPELWERVKDFNIPAVLLGSNHIVSPRGLRSSSNIVYFDELIELSGNASNFP 184 (488)
Q Consensus 105 ~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (488)
+++|++|.++.+++..+++.+++++++++.+....+........ . .+....... ....
T Consensus 534 ~~vpld~~~p~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~-~------------------~~~~~~~~~---~~~~ 591 (1296)
T PRK10252 534 AWLPLDTGYPDDRLKMMLEDARPSLLITTADQLPRFADVPDLTS-L------------------CYNAPLAPQ---GAAP 591 (1296)
T ss_pred EEEecCccCHHHHHHHHHHhCCCCEEEECcchhhhcccCCCcee-e------------------ecccccccc---cCCC
Confidence 99999999999999999999999999999876555433210000 0 000000000 1111
Q ss_pred CCCCCCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHhhhhhhcCCCCcEEEEecchhhHHhHHHHHHHHhhCCceEE
Q 043601 185 DVSVKQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTAMDQELAGALDYVTLCVLPMFHVFGLSFVVYAQLQKGNCVV 264 (488)
Q Consensus 185 ~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~ 264 (488)
.....++++++|+|||||||.||||+++|+++.+. .......+...++++++...|++|..++ +.++.++..|++++
T Consensus 592 ~~~~~~~~~a~i~~TSGSTG~PKgV~~~h~~l~~~--~~~~~~~~~~~~~d~~l~~~~~~fd~~~-~~~~~~l~~G~~l~ 668 (1296)
T PRK10252 592 LQLSQPHHTAYIIFTSGSTGRPKGVMVGQTAIVNR--LLWMQNHYPLTADDVVLQKTPCSFDVSV-WEFFWPFIAGAKLV 668 (1296)
T ss_pred CCCCCCCCeEEEEECCCCCCCCCEEEeccHHHHHH--HHHHHHhcCCCCCCEEEEeCCcchhhhH-HHHHHHHhCCCEEE
Confidence 12235789999999999999999999999999887 4445566778889999999999998887 77889999999999
Q ss_pred EcCC---CCHHHHHHHHHhcCccEEEecHHHHHHHHhcCCccC-CCCCCCccEEEEccCCCcHHHHHHHHhhCCCCeEEe
Q 043601 265 SMRK---FDLETALRAIEKYRVTHWWVVPPIILALAKNVSLVK-KFDLSSLKGIGSGAAPLRKELVEECSKNLPTVTVFQ 340 (488)
Q Consensus 265 ~~~~---~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~-~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~i~~ 340 (488)
+.++ .++..+++.++++++|++.++|+++..+++...... ...++++|.+++|||++++++.+.|.+.++ +++++
T Consensus 669 ~~~~~~~~~~~~~~~~i~~~~vt~~~~~Ps~l~~l~~~~~~~~~~~~~~~lr~i~~gGe~l~~~~~~~~~~~~~-~~l~n 747 (1296)
T PRK10252 669 MAEPEAHRDPLAMQQFFAEYGVTTTHFVPSMLAAFVASLTPEGARQSCASLRQVFCSGEALPADLCREWQQLTG-APLHN 747 (1296)
T ss_pred ECChhccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhhhccccccccCCCccEEEEecCCCCHHHHHHHHhcCC-CEEEe
Confidence 9863 689999999999999999999999999887522221 235689999999999999999999999885 89999
Q ss_pred ccCcccccccccccCCCCC-----CCCCCceeecCCCceEEEEeCCCCCCCCCCCcceEEEecC----------------
Q 043601 341 GYGMTETCGVVTVENPLLG-----VQNSGSTGTLVAGVEAQIVCVDTLKPLPPNQVGELWVRGP---------------- 399 (488)
Q Consensus 341 ~YG~tE~~~~~~~~~~~~~-----~~~~~~~g~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~---------------- 399 (488)
.||+||++..++....... .....++|+|++++.++|+| +.+++++.|..|||+++|+
T Consensus 748 ~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d-~~~~~~~~g~~Gel~i~g~~~~~GY~~~~~~t~~~ 826 (1296)
T PRK10252 748 LYGPTEAAVDVSWYPAFGEELAAVRGSSVPIGYPVWNTGLRILD-ARMRPVPPGVAGDLYLTGIQLAQGYLGRPDLTASR 826 (1296)
T ss_pred CCCcchhhheeeeeecccccccccCCCCCCcccccCCCEEEEEC-CCCCCCCCCCceEEEecccccchhhCCCcccchhh
Confidence 9999999876654432211 23346799999999999999 6899999999999999984
Q ss_pred -----------CccccceEEEccCCcEEEEcccCcceeeCcEEe---eHhHHHhcCCCeeeeEEEeec----C--CCCCc
Q 043601 400 -----------ILMPGDLGYFDEHGQLFIVDRIKELIKCNGFQV---ELEGVLVSHPEILDAVVIPFP----D--PEAGE 459 (488)
Q Consensus 400 -----------~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v---~ie~~l~~~~~v~~~~v~~~~----~--~~~~~ 459 (488)
||+|||+|++++||.++++||+|++||++|++| +||.+|.++|+|.+++|+... . .....
T Consensus 827 f~~~~~~~~~~~y~TGDl~~~~~~G~l~~~GR~d~~ik~~G~ri~~~eIE~~l~~~~~v~~a~v~~~~~~~~~~~~~~~~ 906 (1296)
T PRK10252 827 FIADPFAPGERMYRTGDVARWLDDGAVEYLGRSDDQLKIRGQRIELGEIDRAMQALPDVEQAVTHACVINQAAATGGDAR 906 (1296)
T ss_pred cccCCCCCCCEEEecCceEEEcCCCcEEEecccCCeEEEeeEEecHHHHHHHHHhCccccceEEEEEeccccccCCCCcc
Confidence 588999999999999999999999999999999 999999999999999877542 1 11223
Q ss_pred eEEEEEEeCCCCCCCHHHHHHHHHhhcCC
Q 043601 460 VPIAYVVRSPNSSLTKEDVQKFVANDSQL 488 (488)
Q Consensus 460 ~~~~~v~~~~~~~~~~~~i~~~~~~~l~~ 488 (488)
.++++|+.+++...+.++++++++++|+.
T Consensus 907 ~lva~v~~~~~~~~~~~~l~~~l~~~Lp~ 935 (1296)
T PRK10252 907 QLVGYLVSQSGLPLDTSALQAQLRERLPP 935 (1296)
T ss_pred EEEEEEEcCCCCCCCHHHHHHHHHhhCch
Confidence 79999998877667889999999998863
No 76
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=100.00 E-value=1e-55 Score=449.62 Aligned_cols=437 Identities=23% Similarity=0.298 Sum_probs=361.1
Q ss_pred CCHHHHHhhccccCCCceEEEeCCCCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHHcCCeE
Q 043601 27 LSMVHFLFRNSASYGSKSALIDADSGESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQFPICLLGVIAIGGIA 106 (488)
Q Consensus 27 ~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~ 106 (488)
.++.++|.++++ |+++|+++. ++.+||+||+++++++|++|.+.|+++|++|+++++|++++++++|||+++|+++
T Consensus 25 ~~~~~~~~~~a~--p~~~a~~~~--~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~v~~~n~~~~~~~~la~~~~G~v~ 100 (536)
T PRK10946 25 LPLTDILTRHAA--SDAIAVICG--ERQFSYRELNQASDNLACSLRRQGIKPGDTALVQLGNVAEFYITFFALLKLGVAP 100 (536)
T ss_pred ccHHHHHHHhhC--CCCeEEEeC--CCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCChHHHHHHHHHHHHcCeEE
Confidence 689999999887 999999987 7899999999999999999999999999999999999999999999999999988
Q ss_pred eecCCCCCHHHHHHHHhhcCCeEEEEcccc--------HHHHhcc--CCCeEEEcccCcccCCCCcCCCCccchHHHHhh
Q 043601 107 TTANPVYTVSELSKQVKDSSPKLVVTVPEL--------WERVKDF--NIPAVLLGSNHIVSPRGLRSSSNIVYFDELIEL 176 (488)
Q Consensus 107 v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~--------~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (488)
+++.+.....++..+++.++++.++++... ...+... ....+.+..+ .....+.+.+..
T Consensus 101 v~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~ 169 (536)
T PRK10946 101 VNALFSHQRSELNAYASQIEPALLIADRQHALFSDDDFLNTLVAEHSSLRVVLLLND-----------DGEHSLDDAINH 169 (536)
T ss_pred ecCCccccHHHHHHHHhhcCCCEEEEeccccccchHHHHHHHHhhCCCceEEEEecC-----------CCCccHHHHhhC
Confidence 877777778889999999999999998642 1222111 1112222111 122234444433
Q ss_pred cCCCCCCCCCCCCCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHhhhhhhcCCCCcEEEEecchhhHHhHHH-HHHH
Q 043601 177 SGNASNFPDVSVKQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTAMDQELAGALDYVTLCVLPMFHVFGLSF-VVYA 255 (488)
Q Consensus 177 ~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 255 (488)
.. .........++++++++|||||||.||+|++||.++.... ......+....++++++.+|++|.+++.. .++.
T Consensus 170 ~~--~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~--~~~~~~~~~~~~~~~l~~~p~~h~~~~~~~~~~~ 245 (536)
T PRK10946 170 PA--EDFTATPSPADEVAFFQLSGGSTGTPKLIPRTHNDYYYSV--RRSVEICGFTPQTRYLCALPAAHNYPMSSPGALG 245 (536)
T ss_pred cc--cccccCCCCCCCeEEEEeCCCCCCCCcEEEEehHHHHHHH--HHHHHhcCCCCCceEEEecCccccccchhhhHHH
Confidence 22 1222334567899999999999999999999999998873 33455566788899999999999888753 5788
Q ss_pred HhhCCceEEEcCCCCHHHHHHHHHhcCccEEEecHHHHHHHHhcCCc-cCCCCCCCccEEEEccCCCcHHHHHHHHhhCC
Q 043601 256 QLQKGNCVVSMRKFDLETALRAIEKYRVTHWWVVPPIILALAKNVSL-VKKFDLSSLKGIGSGAAPLRKELVEECSKNLP 334 (488)
Q Consensus 256 ~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~-~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~ 334 (488)
++..|+++++.+.+++..+++.+++++++++.++|+.+..+++.... .....++++|.+++||+++++++.+.|.+.++
T Consensus 246 ~l~~g~~~~~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~v~~gg~~l~~~~~~~~~~~~g 325 (536)
T PRK10946 246 VFLAGGTVVLAPDPSATLCFPLIEKHQVNVTALVPPAVSLWLQAIAEGGSRAQLASLKLLQVGGARLSETLARRIPAELG 325 (536)
T ss_pred HhhcCcEEEECCCCCHHHHHHHHHHhCCcEEEeChHHHHHHHhhhcccCccccccceeEEEECCCCCCHHHHHHHHHhcC
Confidence 89999999998888999999999999999999999999999875212 22345789999999999999999999999886
Q ss_pred CCeEEeccCcccccccccccCCCCCCCCCCceeecC-CCceEEEEeCCCCCCCCCCCcceEEEecC--------------
Q 043601 335 TVTVFQGYGMTETCGVVTVENPLLGVQNSGSTGTLV-AGVEAQIVCVDTLKPLPPNQVGELWVRGP-------------- 399 (488)
Q Consensus 335 ~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~i~d~~~~~~~~~g~~Gel~v~g~-------------- 399 (488)
+++++.||+||++...... .........++|+|+ |++.++++| +++++++.|+.|||+++|+
T Consensus 326 -~~~~~~YG~tE~~~~~~~~-~~~~~~~~~~~G~p~~~~~~v~i~d-~~~~~~~~g~~Gel~v~g~~~~~GY~~~~~~t~ 402 (536)
T PRK10946 326 -CQLQQVFGMAEGLVNYTRL-DDSDERIFTTQGRPMSPDDEVWVAD-ADGNPLPQGEVGRLMTRGPYTFRGYYKSPQHNA 402 (536)
T ss_pred -CeEEEeecccccceeeecC-CCccccccccCCcccCCCceEEEEC-CCCCCCCCCCccEEEEecCccchhhcCCcccch
Confidence 9999999999975433222 222234567899998 799999999 6889999999999999884
Q ss_pred -------CccccceEEEccCCcEEEEcccCcceeeCcEEe---eHhHHHhcCCCeeeeEEEeecCCCCCceEEEEEEeCC
Q 043601 400 -------ILMPGDLGYFDEHGQLFIVDRIKELIKCNGFQV---ELEGVLVSHPEILDAVVIPFPDPEAGEVPIAYVVRSP 469 (488)
Q Consensus 400 -------~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v---~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~ 469 (488)
|+.|||+|+++++|++++.||.+|+++.+|.++ +||.++.++++|.+++|++.++...++.++++|++++
T Consensus 403 ~~~~~d~~~~TGDl~~~d~~G~l~~~gR~~d~i~~~G~~v~~~eiE~~l~~~~~v~~~~v~~~~~~~~g~~~~a~vv~~~ 482 (536)
T PRK10946 403 SAFDANGFYCSGDLVSIDPDGYITVVGREKDQINRGGEKIAAEEIENLLLRHPAVIHAALVSMEDELMGEKSCAFLVVKE 482 (536)
T ss_pred hhcccCCceecCceEEECCCCcEEEeccccceeecCCEEEcHHHHHHHHHhCCCcceEEEEcCCCcccCceEEEEEEeCC
Confidence 789999999999999999999999999999999 9999999999999999999999888889999999876
Q ss_pred CCCCCHHHHHHHHHhh-cC
Q 043601 470 NSSLTKEDVQKFVAND-SQ 487 (488)
Q Consensus 470 ~~~~~~~~i~~~~~~~-l~ 487 (488)
+ .+.++++++++++ |+
T Consensus 483 ~--~~~~~l~~~~~~~~l~ 499 (536)
T PRK10946 483 P--LKAVQLRRFLREQGIA 499 (536)
T ss_pred C--CCHHHHHHHHHhCCcc
Confidence 5 6889999999875 54
No 77
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated
Probab=100.00 E-value=7.5e-57 Score=456.53 Aligned_cols=432 Identities=18% Similarity=0.224 Sum_probs=330.2
Q ss_pred CC-HHHHHhhccccCCCceEEEeCCCC--cceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHHcC
Q 043601 27 LS-MVHFLFRNSASYGSKSALIDADSG--ESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQFPICLLGVIAIG 103 (488)
Q Consensus 27 ~~-l~~~l~~~a~~~p~~~a~~~~~~~--~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G 103 (488)
|| +.+.|.++++++|+++|+++.+++ +++||+||.++++++|+.|.++ ++|++|+++++|++++++++|||+++|
T Consensus 1 ~~~~~~~l~~~~~~~~~~~a~~~~~~~~~~~~ty~el~~~~~~lA~~L~~~--~~g~~V~l~~~~~~e~~~~~la~~~~G 78 (525)
T PRK05851 1 MNELAAALSDAMTASGRDLVVLDRESGLWRRHPWPEVHGRAENVAARLLDR--DRPGAVGLVGEPTVELVAAIQGAWLAG 78 (525)
T ss_pred CchHHHHHHHHhcCCCCceEEeCCCCCcceeecHHHHHHHHHHHHHHHHhc--CCCCeEEEEcCCCHHHHHHHHHHHHcC
Confidence 45 788999999999999999987433 7899999999999999999987 799999999999999999999999999
Q ss_pred CeEeecCCC-------CCHHHHHHHHhhcCCeEEEEccccHHHHhccCCCeEEEcccCcccCCCCcCCCCccchHHHHhh
Q 043601 104 GIATTANPV-------YTVSELSKQVKDSSPKLVVTVPELWERVKDFNIPAVLLGSNHIVSPRGLRSSSNIVYFDELIEL 176 (488)
Q Consensus 104 ~~~v~l~~~-------~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (488)
+++++.+.. ...+.+..+++.++++++|++.+....+...... +.+. ++......
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~-~~~~-----------------~~~~~~~~ 140 (525)
T PRK05851 79 AAVSILPGPVRGADDGRWADATLTRFAGIGVRTVLSHGSHLERLRAVDSS-VTVH-----------------DLATAAHT 140 (525)
T ss_pred CCCcCCCCCCCccchhhHHHHHHHHHHhcCCCEEEeCHHHHHHHHHhhcc-cccc-----------------cccccccc
Confidence 986543211 1234556678999999999987765544322110 0000 00000000
Q ss_pred cCCCCCCCCCCCCCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHhhhhhhcCC-CCcEEEEecchhhHHhHHHHHHH
Q 043601 177 SGNASNFPDVSVKQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTAMDQELAGA-LDYVTLCVLPMFHVFGLSFVVYA 255 (488)
Q Consensus 177 ~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 255 (488)
. .........++++++|+|||||||.||+|++||.++.... ......+... ++++++..+|++|.+++ ..++.
T Consensus 141 -~--~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~~~~~~--~~~~~~~~~~~~~d~~l~~~pl~h~~g~-~~~~~ 214 (525)
T PRK05851 141 -N--RSASLTPPDSGGPAVLQGTAGSTGTPRTAILSPGAVLSNL--RGLNARVGLDAATDVGCSWLPLYHDMGL-AFLLT 214 (525)
T ss_pred -c--ccccCCCCCCCCeEEEEeCCCCCCCCcEEEecHHHHHHHH--HHHHHHhCCCCCCCeEEEcCCCccCccH-HHHHH
Confidence 0 0001112467899999999999999999999999998773 3344555666 88999999999999998 56788
Q ss_pred HhhCCceEEEcCC--C--CHHHHHHHHHhcCccEEEecHHHHHHHHhcCCccCCCCCCCccEEEEccCCCcHHHHHHHHh
Q 043601 256 QLQKGNCVVSMRK--F--DLETALRAIEKYRVTHWWVVPPIILALAKNVSLVKKFDLSSLKGIGSGAAPLRKELVEECSK 331 (488)
Q Consensus 256 ~l~~G~~~~~~~~--~--~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~ 331 (488)
++..|+++++.+. + ++..+++.++++++|++...|..+..+.+........++++||.+++||+++++++.+.|.+
T Consensus 215 ~l~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~p~~~~~~l~~~~~~~~~~~l~~lr~~~~gG~~l~~~~~~~~~~ 294 (525)
T PRK05851 215 AALAGAPLWLAPTTAFSASPFRWLSWLSDSRATLTAAPNFAYNLIGKYARRVSDVDLGALRVALNGGEPVDCDGFERFAT 294 (525)
T ss_pred HHHcCCeEEEcCHHHHHHCHHHHHHHHHHhCCeEEeCCcHHHHHHHHhhccccCCCHHHhheeEeccccCCHHHHHHHHH
Confidence 9999999998763 3 57889999999999987554444444433212223456789999999999999999999987
Q ss_pred h---CC--CCeEEeccCcccccccccccCCCC-------------CCCCCCceeecCCCceEEEEeCCCCCCCCCCCcce
Q 043601 332 N---LP--TVTVFQGYGMTETCGVVTVENPLL-------------GVQNSGSTGTLVAGVEAQIVCVDTLKPLPPNQVGE 393 (488)
Q Consensus 332 ~---~~--~~~i~~~YG~tE~~~~~~~~~~~~-------------~~~~~~~~g~~~~~~~~~i~d~~~~~~~~~g~~Ge 393 (488)
. ++ ...+++.||+||++..++...+.. ......++|+|+++++++|+|++.+.+++.|+.||
T Consensus 295 ~~~~~g~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~g~~v~i~d~~~~~~~~~g~~GE 374 (525)
T PRK05851 295 AMAPFGFDAGAAAPSYGLAESTCAVTVPVPGIGLRVDEVTTDDGSGARRHAVLGNPIPGMEVRISPGDGAAGVAGREIGE 374 (525)
T ss_pred HHhhcCCChhhcccccchhhhceEEEecCCCCCceeeeeccccCcccceeeeecCCCCCcEEEEECCCCCccCCCCCeEE
Confidence 4 33 235999999999986655432210 01234579999999999999965566789999999
Q ss_pred EEEecC----------------CccccceEEEccCCcEEEEcccCcceeeCcEEe---eHhHHHhcCCCeeeeEEEeecC
Q 043601 394 LWVRGP----------------ILMPGDLGYFDEHGQLFIVDRIKELIKCNGFQV---ELEGVLVSHPEILDAVVIPFPD 454 (488)
Q Consensus 394 l~v~g~----------------~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v---~ie~~l~~~~~v~~~~v~~~~~ 454 (488)
|+++|+ ||+|||+|+++ +|.++++||+||+||++|++| +||.++.+||.|.+++|++.++
T Consensus 375 l~v~g~~~~~GY~~~~~~~~~~~~~TGDl~~~~-~G~l~~~GR~dd~i~~~G~~v~p~eIE~~l~~~p~V~~~~vv~~~~ 453 (525)
T PRK05851 375 IEIRGASMMSGYLGQAPIDPDDWFPTGDLGYLV-DGGLVVCGRAKELITVAGRNIFPTEIERVAAQVRGVREGAVVAVGT 453 (525)
T ss_pred EEEecCchhhccccCCccCCCCceeccceEEEE-CCEEEEEeecCCEEEECCEEeCHHHHHHHHHhCCCcccceEEEEEe
Confidence 999985 78999999996 799999999999999999999 9999999999999999999988
Q ss_pred CCCCceEEEEEEeCCCCCCCHHHHHHHHHhhc
Q 043601 455 PEAGEVPIAYVVRSPNSSLTKEDVQKFVANDS 486 (488)
Q Consensus 455 ~~~~~~~~~~v~~~~~~~~~~~~i~~~~~~~l 486 (488)
+..++.+.++|+.... ..+.++++++++++|
T Consensus 454 ~~~~~~~~~~v~~~~~-~~~~~~~~~~~~~~l 484 (525)
T PRK05851 454 GEGSARPGLVIAAEFR-GPDEAGARSEVVQRV 484 (525)
T ss_pred cCCCCceeEEEEEEec-CcchHHHHHHHHHHH
Confidence 8878777777665421 234455555555544
No 78
>PTZ00216 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.3e-56 Score=465.48 Aligned_cols=427 Identities=22% Similarity=0.313 Sum_probs=328.8
Q ss_pred CCCHHHHHhhccccCCCceEEEeCC-------------------------CCcceeHHHHHHHHHHHHHHHHHcCCCCCC
Q 043601 26 NLSMVHFLFRNSASYGSKSALIDAD-------------------------SGESLTFSQFKSIVIKVSHGFRHLGVTKHD 80 (488)
Q Consensus 26 ~~~l~~~l~~~a~~~p~~~a~~~~~-------------------------~~~~~Ty~el~~~~~~la~~L~~~g~~~g~ 80 (488)
..|+.++|.++++.+|+++|+.+.. .++++||+||.++++++|++|.++|+++||
T Consensus 68 ~~t~~~~~~~~~~~~p~~~a~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lTy~el~~~~~~lA~~L~~~Gv~~gd 147 (700)
T PTZ00216 68 GPNFLQRLERICKERGDRRALAYRPVERVEKEVVKDADGKERTMEVTHFNETRYITYAELWERIVNFGRGLAELGLTKGS 147 (700)
T ss_pred CCCHHHHHHHHHHhCCCCCeEEEeccccccccccccCCCccccccccccCCceEeEHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 3689999999999999999998731 247899999999999999999999999999
Q ss_pred EEEEEcCCCcchHHHHHHHHHcCCeEeecCCCCCHHHHHHHHhhcCCeEEEEccccHHHHhcc----C---CCeEEEccc
Q 043601 81 VVLIFAPNSIQFPICLLGVIAIGGIATTANPVYTVSELSKQVKDSSPKLVVTVPELWERVKDF----N---IPAVLLGSN 153 (488)
Q Consensus 81 ~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~----~---~~~~~~~~~ 153 (488)
+|+|+++|+++|++++|||+++|++++|+++.++.+++.+++++++++++|++.+....+... . ...+.++.
T Consensus 148 ~V~i~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~lv~~~~~~~~l~~~~~~~~~~~~~ii~~~~- 226 (700)
T PTZ00216 148 NVAIYEETRWEWLASIYGIWSQSMVAATVYANLGEDALAYALRETECKAIVCNGKNVPNLLRLMKSGGMPNTTIIYLDS- 226 (700)
T ss_pred EEEEEcCCCHHHHHHHHHHHHcCCeEEeeCCCCCHHHHHhhhhccCccEEEECHHHHHHHHHhhhhccCCceEEEEECC-
Confidence 999999999999999999999999999999999999999999999999999987655443221 1 11222211
Q ss_pred CcccCCCCcCCCCccchHHHHhhcC--CCCCCCCCCCCCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHhhhhhh--
Q 043601 154 HIVSPRGLRSSSNIVYFDELIELSG--NASNFPDVSVKQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTAMDQEL-- 229 (488)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~-- 229 (488)
.. ...........++++++..+. ...........++++++|+|||||||.||||++||+++.+.... ....+
T Consensus 227 -~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~iiyTSGTTG~PKGV~lth~nl~~~~~~--~~~~~~~ 302 (700)
T PTZ00216 227 -LP-ASVDTEGCRLVAWTDVVAKGHSAGSHHPLNIPENNDDLALIMYTSGTTGDPKGVMHTHGSLTAGILA--LEDRLND 302 (700)
T ss_pred -Cc-cccccCCceEEEHHHHHHhCCccccccccCCCCCcccEEEEEEeCCCCCcCcEEEEEhHHHHHHHHH--HHhhccc
Confidence 00 000111223456777765541 11111123446889999999999999999999999999876332 22111
Q ss_pred --c-CCCCcEEEEecchhhHHhHHHHHHHHhhCCceEEEcCCCCHHHHHH-------HHHhcCccEEEecHHHHHHHHhc
Q 043601 230 --A-GALDYVTLCVLPMFHVFGLSFVVYAQLQKGNCVVSMRKFDLETALR-------AIEKYRVTHWWVVPPIILALAKN 299 (488)
Q Consensus 230 --~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~-------~l~~~~~t~l~~~p~~~~~l~~~ 299 (488)
. ..+++++++.+|++|.+++. .....+..|+++.+. ++..+.+ .+++++||++.++|.+++.+.+.
T Consensus 303 ~~~~~~~~d~~ls~lPl~H~~~~~-~~~~~l~~G~~v~~~---~~~~l~~~~~~~~~~l~~~~pT~~~~vP~~~~~l~~~ 378 (700)
T PTZ00216 303 LIGPPEEDETYCSYLPLAHIMEFG-VTNIFLARGALIGFG---SPRTLTDTFARPHGDLTEFRPVFLIGVPRIFDTIKKA 378 (700)
T ss_pred ccCCCCCCCEEEEEChHHHHHHHH-HHHHHHHcCCEEEEC---CHHHhhhhhccccchHHHcCCcEEEechHHHHHHHHH
Confidence 1 35788999999999999874 445557788877663 3455544 68899999999999999887643
Q ss_pred CCcc------------------------CCC----------------CCCCccEEEEccCCCcHHHHHHHHhhCCCCeEE
Q 043601 300 VSLV------------------------KKF----------------DLSSLKGIGSGAAPLRKELVEECSKNLPTVTVF 339 (488)
Q Consensus 300 ~~~~------------------------~~~----------------~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~i~ 339 (488)
.... ... ..+++|.+++||+++++++.+.++..++ .++
T Consensus 379 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~~~~g~~lr~i~~GGa~l~~~~~~~~~~~~~--~l~ 456 (700)
T PTZ00216 379 VEAKLPPVGSLKRRVFDHAYQSRLRALKEGKDTPYWNEKVFSAPRAVLGGRVRAMLSGGGPLSAATQEFVNVVFG--MVI 456 (700)
T ss_pred HHHHHhccCHHHHHHHHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHhCCcEEEEEECCCCCCHHHHHHHHHHhh--hHh
Confidence 1000 000 0158999999999999999988877664 899
Q ss_pred eccCcccccccccccCCCCCCCCCCceeecCCCceEEEEeCCCC-CCCCCCCcceEEEecC-------------------
Q 043601 340 QGYGMTETCGVVTVENPLLGVQNSGSTGTLVAGVEAQIVCVDTL-KPLPPNQVGELWVRGP------------------- 399 (488)
Q Consensus 340 ~~YG~tE~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d~~~~-~~~~~g~~Gel~v~g~------------------- 399 (488)
+.||+||+++..+..... ....+++|+|+++++++|+|.++. ...+.+..|||+|+|+
T Consensus 457 ~~YG~TEt~~~~~~~~~~--~~~~~svG~p~~g~evkI~d~~~~~~~~~~~~~GEL~vrG~~v~~GY~~~pe~T~~~f~~ 534 (700)
T PTZ00216 457 QGWGLTETVCCGGIQRTG--DLEPNAVGQLLKGVEMKLLDTEEYKHTDTPEPRGEILLRGPFLFKGYYKQEELTREVLDE 534 (700)
T ss_pred hccCcccccccccccCCC--CCCCCCcCCcCCCeEEEEeechhhccCCCCCCCceEEEcCCcccchhcCChhHhhhhccc
Confidence 999999998765544332 456789999999999999995432 2345567899999985
Q ss_pred --CccccceEEEccCCcEEEEcccCccee-eCcEEe---eHhHHHhcCCCeeee--EEEeecCCCCCceEEEEEEeC
Q 043601 400 --ILMPGDLGYFDEHGQLFIVDRIKELIK-CNGFQV---ELEGVLVSHPEILDA--VVIPFPDPEAGEVPIAYVVRS 468 (488)
Q Consensus 400 --~~~tGD~~~~~~~g~l~~~GR~~d~i~-~~G~~v---~ie~~l~~~~~v~~~--~v~~~~~~~~~~~~~~~v~~~ 468 (488)
|++|||+|++++||++++.||+||+|| .+|++| +||+++.++|.|.++ +|+..+. ...++|+|++.
T Consensus 535 dGw~~TGDig~~d~dG~l~i~GR~kd~ik~~~G~~I~p~eIE~~l~~~p~V~~~~~~v~~~~~---~~~l~a~vv~~ 608 (700)
T PTZ00216 535 DGWFHTGDVGSIAANGTLRIIGRVKALAKNCLGEYIALEALEALYGQNELVVPNGVCVLVHPA---RSYICALVLTD 608 (700)
T ss_pred cCCeeccceEEEcCCCcEEEEEehHhheecCCCceeccHHHHHHHhcCcCcccceEEEEEecC---CceEEEEEecC
Confidence 789999999999999999999999999 799999 999999999999973 4444332 24788888874
No 79
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=100.00 E-value=5.1e-56 Score=459.05 Aligned_cols=436 Identities=22% Similarity=0.230 Sum_probs=335.3
Q ss_pred CCCHHHHHhhccccCCCceEEEeCC---C--C--cceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHH
Q 043601 26 NLSMVHFLFRNSASYGSKSALIDAD---S--G--ESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQFPICLLG 98 (488)
Q Consensus 26 ~~~l~~~l~~~a~~~p~~~a~~~~~---~--~--~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA 98 (488)
..|+.++|.+.++++|+++|+.... + + .++||+||.++++++|++|.+.|+++||+|+|+++|+++|++++||
T Consensus 41 ~~t~~~~~~~~~~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~ew~~~~lA 120 (660)
T PLN02430 41 ITTAWDIFSKSVEKYPDNKMLGWRRIVDGKVGPYMWKTYKEVYEEVLQIGSALRASGAEPGSRVGIYGSNCPQWIVAMEA 120 (660)
T ss_pred CCCHHHHHHHHHHhCCCCceEEEEecCCCCCCCcEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHH
Confidence 3689999999999999999986421 1 1 3579999999999999999999999999999999999999999999
Q ss_pred HHHcCCeEeecCCCCCHHHHHHHHhhcCCeEEEEccccHHH-Hhcc-----CCCeEEEcccCcccCC--CCcCCCCccch
Q 043601 99 VIAIGGIATTANPVYTVSELSKQVKDSSPKLVVTVPELWER-VKDF-----NIPAVLLGSNHIVSPR--GLRSSSNIVYF 170 (488)
Q Consensus 99 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~-~~~~-----~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 170 (488)
|+++|+++||+++.++.+++.++++.++++++|++...... +... ....++.......... .........++
T Consensus 121 ~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~ 200 (660)
T PLN02430 121 CAAHSLICVPLYDTLGPGAVDYIVDHAEIDFVFVQDKKIKELLEPDCKSAKRLKAIVSFTSVTEEESDKASQIGVKTYSW 200 (660)
T ss_pred HHHcCCeEEEeccCCCHHHHHHHHhccCCCEEEECHHHHHHHHhhhcccCCCceEEEEECCCChHHhhhhhcCCcEEEEH
Confidence 99999999999999999999999999999999998754332 2111 1222222211000000 00011123467
Q ss_pred HHHHhhcCCCCCCCCCCCCCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHhhh-hh--hcCCCCcEEEEecchhhHH
Q 043601 171 DELIELSGNASNFPDVSVKQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTAMD-QE--LAGALDYVTLCVLPMFHVF 247 (488)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~ 247 (488)
+++...+.... .......++++++|+|||||||.||||++||+++.......... .. ....+++++++.+|++|.+
T Consensus 201 ~~~~~~~~~~~-~~~~~~~~~d~a~iiyTSGTTG~PKGV~lth~~~~~~~~~~~~~~~~~~~~~~~~d~~ls~lPl~H~~ 279 (660)
T PLN02430 201 IDFLHMGKENP-SETNPPKPLDICTIMYTSGTSGDPKGVVLTHEAVATFVRGVDLFMEQFEDKMTHDDVYLSFLPLAHIL 279 (660)
T ss_pred HHHHHhhccCC-CCCCCcCcCceEEEEECCCCCCCCCEEEeecHHHHHHHHHHHhhccccccCCCCCCEEEEeCcHHHHH
Confidence 77665443211 11223467899999999999999999999999998763321111 11 1356789999999999999
Q ss_pred hHHHHHHHHhhCCceEEEcCCCCHHHHHHHHHhcCccEEEecHHHHHHHHhcCCc----cC-------------------
Q 043601 248 GLSFVVYAQLQKGNCVVSMRKFDLETALRAIEKYRVTHWWVVPPIILALAKNVSL----VK------------------- 304 (488)
Q Consensus 248 ~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~----~~------------------- 304 (488)
+... .+.++..|+++++... ++..+++.+++.+||++.++|.+++.+.+.... ..
T Consensus 280 ~~~~-~~~~l~~G~~i~~~~~-~~~~l~~~l~~~~pt~~~~vP~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (660)
T PLN02430 280 DRMI-EEYFFRKGASVGYYHG-DLNALRDDLMELKPTLLAGVPRVFERIHEGIQKALQELNPRRRLIFNALYKYKLAWMN 357 (660)
T ss_pred HHHH-HHHHHHcCCEEEEeCC-ChhhHHHHHHHhCCcEEEecHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHh
Confidence 9854 4567889999987654 688899999999999999999999887652100 00
Q ss_pred -------CC---C-----------CCCccEEEEccCCCcHHHHHHHHhhCCCCeEEeccCcccccccccccCCCCCCCCC
Q 043601 305 -------KF---D-----------LSSLKGIGSGAAPLRKELVEECSKNLPTVTVFQGYGMTETCGVVTVENPLLGVQNS 363 (488)
Q Consensus 305 -------~~---~-----------l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~ 363 (488)
.. + .+++|.+++||+++++++.+.++ .++.+.+++.||+||+++..+...+.. ....
T Consensus 358 ~~~~~~~~~~~~d~l~~~~i~~~~G~~lr~~~~gga~l~~~~~~~~~-~~~~~~i~~~YG~TE~~~~~~~~~~~~-~~~~ 435 (660)
T PLN02430 358 RGYSHKKASPMADFLAFRKVKAKLGGRLRLLISGGAPLSTEIEEFLR-VTSCAFVVQGYGLTETLGPTTLGFPDE-MCML 435 (660)
T ss_pred cCCCCCCcchhHHHHHHHHHHHHhCCeEEEEEECCCCCCHHHHHHHH-HhcCCCeeeecchhhhhhceEeecccc-CCCC
Confidence 00 0 15899999999999999876655 444478999999999987666554322 2356
Q ss_pred CceeecCCCceEEEEeC-CCC-CCCCCCCcceEEEecC--------------------CccccceEEEccCCcEEEEccc
Q 043601 364 GSTGTLVAGVEAQIVCV-DTL-KPLPPNQVGELWVRGP--------------------ILMPGDLGYFDEHGQLFIVDRI 421 (488)
Q Consensus 364 ~~~g~~~~~~~~~i~d~-~~~-~~~~~g~~Gel~v~g~--------------------~~~tGD~~~~~~~g~l~~~GR~ 421 (488)
+++|+|.+++++++.|. +.+ .+++.+..|||+|+|+ |++|||+|++++||++++.||+
T Consensus 436 gsvG~p~~~~evki~d~~~~g~~~~~~~~~GEi~vrg~~v~~GY~~~~e~t~~~~~dGw~~TGDig~~d~dG~l~i~gR~ 515 (660)
T PLN02430 436 GTVGAPAVYNELRLEEVPEMGYDPLGEPPRGEICVRGKCLFSGYYKNPELTEEVMKDGWFHTGDIGEILPNGVLKIIDRK 515 (660)
T ss_pred CCccCCCCceEEEEEEcCCcCcccCCCCCcceEEecCCCccccccCChHHhhhhhhccceeccceEEECCCCcEEEEEcc
Confidence 89999999999999873 333 4556667899999985 7899999999999999999999
Q ss_pred Ccceee-CcEEe---eHhHHHhcCCCeeeeEEEeecCCCCCceEEEEEEeCC
Q 043601 422 KELIKC-NGFQV---ELEGVLVSHPEILDAVVIPFPDPEAGEVPIAYVVRSP 469 (488)
Q Consensus 422 ~d~i~~-~G~~v---~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~ 469 (488)
+|+||. +|++| +||+++.++|.|.+++|++.. .++.++|+|++++
T Consensus 516 kd~ik~~~G~~V~p~~IE~~l~~~p~V~~~~V~G~~---~~~~~~A~vv~~~ 564 (660)
T PLN02430 516 KNLIKLSQGEYVALEYLENVYGQNPIVEDIWVYGDS---FKSMLVAVVVPNE 564 (660)
T ss_pred cccEEcCCCcEEchHHHHHHHhcCCCeeEEEEEecC---CcceEEEEEEcCH
Confidence 999997 79999 999999999999999999853 2468899998864
No 80
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=100.00 E-value=2.1e-56 Score=468.30 Aligned_cols=434 Identities=21% Similarity=0.318 Sum_probs=348.3
Q ss_pred CCCCHHHHHhhccccCCC-ceEEEeCCCCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHHcC
Q 043601 25 PNLSMVHFLFRNSASYGS-KSALIDADSGESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQFPICLLGVIAIG 103 (488)
Q Consensus 25 ~~~~l~~~l~~~a~~~p~-~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G 103 (488)
+..|+.+.|.++++++|+ +.|+.+. .++.+||+||.++++++|++|++. +++||+|+++++|++++++++|||+++|
T Consensus 202 ~~~t~~~~l~~~~~~~p~~~~a~~~~-~~~~~Ty~el~~~~~~lA~~L~~~-~~~gd~Val~~~n~~e~~~~~lA~~~~G 279 (718)
T PRK08043 202 PRETLYEALLSAQYRYGAGKPCIEDV-NFTPDSYRKLLKKTLFVGRILEKY-SVEGERIGLMLPNATISAAVIFGASLRR 279 (718)
T ss_pred CCCCHHHHHHHHHHHhCCCCcceEcC-CCCcccHHHHHHHHHHHHHHHHHh-cCCCceEEEEcCCcHHHHHHHHHHHHcC
Confidence 457899999999999998 5777653 247899999999999999999887 5999999999999999999999999999
Q ss_pred CeEeecCCCCCHHHHHHHHhhcCCeEEEEccccHHHHhccC-------CCeEEEcccCcccCCCCcCCCCccchHHH--H
Q 043601 104 GIATTANPVYTVSELSKQVKDSSPKLVVTVPELWERVKDFN-------IPAVLLGSNHIVSPRGLRSSSNIVYFDEL--I 174 (488)
Q Consensus 104 ~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 174 (488)
++++|+++.++.+++.+++++++++++|++.+......... ...+.+... . ....+.+. .
T Consensus 280 ~v~vpl~~~~~~~~l~~~l~~s~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--------~---~~~~~~~~~~~ 348 (718)
T PRK08043 280 RIPAMMNYTAGVKGLTSAITAAEIKTIFTSRQFLDKGKLWHLPEQLTQVRWVYLEDL--------K---DDVTTADKLWI 348 (718)
T ss_pred CcccccccCcCHHHHHHHHHHcCCcEEEEcHHHHhhccCCChhhhhccccEEEhhhh--------h---hhcchhHHHHH
Confidence 99999999999999999999999999999877544211100 111111100 0 00011110 0
Q ss_pred hhcCCCCCCCCCCCCCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHhhhhhhcCCCCcEEEEecchhhHHhHHHHHH
Q 043601 175 ELSGNASNFPDVSVKQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTAMDQELAGALDYVTLCVLPMFHVFGLSFVVY 254 (488)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (488)
...............++++++++|||||||.||+|++||.++.... ..........++|++++.+|++|.+++...++
T Consensus 349 ~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~l~~~~--~~~~~~~~~~~~d~~l~~~Pl~h~~g~~~~~~ 426 (718)
T PRK08043 349 FAHLLMPRLAQVKQQPEDAALILFTSGSEGHPKGVVHSHKSLLANV--EQIKTIADFTPNDRFMSALPLFHSFGLTVGLF 426 (718)
T ss_pred HHHHhCCccccCCCCCCCeEEEEECCCCCCCCCEEEEcHHHHHHHH--HHHHHhhCCCccCeEEEcCcchhhhhhHHHHH
Confidence 0000001111123467899999999999999999999999998773 33444556788999999999999999877788
Q ss_pred HHhhCCceEEEcCC-CCHHHHHHHHHhcCccEEEecHHHHHHHHhcCCccCCCCCCCccEEEEccCCCcHHHHHHHHhhC
Q 043601 255 AQLQKGNCVVSMRK-FDLETALRAIEKYRVTHWWVVPPIILALAKNVSLVKKFDLSSLKGIGSGAAPLRKELVEECSKNL 333 (488)
Q Consensus 255 ~~l~~G~~~~~~~~-~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~ 333 (488)
.++..|+++++.+. .++..+++.++++++|.++++|+++..+.+. ....++++||.+++||+++++++.+.|.+.|
T Consensus 427 ~~l~~G~~vv~~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~---~~~~~~~~lr~i~~gg~~l~~~~~~~~~~~~ 503 (718)
T PRK08043 427 TPLLTGAEVFLYPSPLHYRIVPELVYDRNCTVLFGTSTFLGNYARF---ANPYDFARLRYVVAGAEKLQESTKQLWQDKF 503 (718)
T ss_pred HHHHcCCEEEEeCCcccHHHHHHHHHhcCCeEEEchHHHHHHhhhh---cCcccccceEEEEEeCccCCHHHHHHHHHHc
Confidence 99999999998764 5678889999999999999999999887654 1335678999999999999999999999998
Q ss_pred CCCeEEeccCcccccccccccCCCCCCCCCCceeecCCCceEEEEeCCCCCCCCCCCcceEEEecC--------------
Q 043601 334 PTVTVFQGYGMTETCGVVTVENPLLGVQNSGSTGTLVAGVEAQIVCVDTLKPLPPNQVGELWVRGP-------------- 399 (488)
Q Consensus 334 ~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~-------------- 399 (488)
+ +.+++.||+||+++.++...+. ....+++|+|+|+++++++|. ++. ++.|||+++|+
T Consensus 504 g-~~l~~~YG~TE~~~~~~~~~~~--~~~~~svG~p~pg~~~~i~d~-~~~----~~~Gel~v~g~~v~~GY~~~e~~~~ 575 (718)
T PRK08043 504 G-LRILEGYGVTECAPVVSINVPM--AAKPGTVGRILPGMDARLLSV-PGI----EQGGRLQLKGPNIMNGYLRVEKPGV 575 (718)
T ss_pred C-CCeecccCcccccceEEecCCc--ccCCCCCCCcCCCCeeEEecC-CCC----CCceEEEEecCCccccccCCCCccc
Confidence 6 8999999999998766554332 346789999999999999984 332 45588887653
Q ss_pred ----------------CccccceEEEccCCcEEEEcccCcceeeCcEEe---eHhHHHhcCCCeeeeEEEeecCCCCCce
Q 043601 400 ----------------ILMPGDLGYFDEHGQLFIVDRIKELIKCNGFQV---ELEGVLVSHPEILDAVVIPFPDPEAGEV 460 (488)
Q Consensus 400 ----------------~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v---~ie~~l~~~~~v~~~~v~~~~~~~~~~~ 460 (488)
||+|||+|++|+||++++.||++|+||.+|++| +||+++.+++.+.+++|++.+++..++.
T Consensus 576 ~~~~~~~~~~~~~~~gw~~TGDlg~~d~dG~l~i~GR~~d~I~~~G~~V~p~eIE~~l~~~~~~~~~avv~~~~~~~ge~ 655 (718)
T PRK08043 576 LEVPTAENARGEMERGWYDTGDIVRFDEQGFVQIQGRAKRFAKIAGEMVSLEMVEQLALGVSPDKQHATAIKSDASKGEA 655 (718)
T ss_pred ccccccccccccccCCeEecCCEEEEcCCCcEEEEecCCCeeEeCcEEcCHHHHHHHHHhCCccceEEEEEccCCCCCce
Confidence 577899999999999999999999999999999 9999999999888888999888888888
Q ss_pred EEEEEEeCCCCCCCHHHHHHHHHhh-cC
Q 043601 461 PIAYVVRSPNSSLTKEDVQKFVAND-SQ 487 (488)
Q Consensus 461 ~~~~v~~~~~~~~~~~~i~~~~~~~-l~ 487 (488)
+++++. +...+.++++++++++ |+
T Consensus 656 ~v~~~~---~~~~~~~~l~~~~~~~~l~ 680 (718)
T PRK08043 656 LVLFTT---DSELTREKLQQYAREHGVP 680 (718)
T ss_pred EEEEEc---CcccCHHHHHHHHHhcCCC
Confidence 887764 3456788999999886 65
No 81
>PRK06164 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.4e-55 Score=450.02 Aligned_cols=447 Identities=21% Similarity=0.283 Sum_probs=359.3
Q ss_pred CCCHHHHHhhccccCCCceEEEeCCCCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHHcCCe
Q 043601 26 NLSMVHFLFRNSASYGSKSALIDADSGESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQFPICLLGVIAIGGI 105 (488)
Q Consensus 26 ~~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~ 105 (488)
.+++.++|.++++.+|+++|+++. ++.+||+||+++++++|+.|.+.|+++|++|+++++|++++++++|||+++|++
T Consensus 9 ~~~l~~~l~~~a~~~p~~~a~~~~--~~~~Ty~~L~~~~~~~a~~L~~~g~~~g~~V~i~~~n~~~~~~~~la~~~~G~~ 86 (540)
T PRK06164 9 ADTLASLLDAHARARPDAVALIDE--DRPLSRAELRALVDRLAAWLAAQGVRRGDRVAVWLPNCIEWVVLFLACARLGAT 86 (540)
T ss_pred CCCHHHHHHHHHHhCCCCeEEecC--CCcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCcHHHHHHHHHHHHhCcE
Confidence 478999999999999999999965 689999999999999999999999999999999999999999999999999999
Q ss_pred EeecCCCCCHHHHHHHHhhcCCeEEEEccccH-----HHHhcc------CCCeEEEcc-cCcccCCCCcCCCCccchHHH
Q 043601 106 ATTANPVYTVSELSKQVKDSSPKLVVTVPELW-----ERVKDF------NIPAVLLGS-NHIVSPRGLRSSSNIVYFDEL 173 (488)
Q Consensus 106 ~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~-----~~~~~~------~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 173 (488)
++|+++..+.+++.++++.++++++|++++.. ..+... ....+.... .....+. .....+.+.
T Consensus 87 ~v~l~~~~~~~~l~~~i~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~ 161 (540)
T PRK06164 87 VIAVNTRYRSHEVAHILGRGRARWLVVWPGFKGIDFAAILAAVPPDALPPLRAIAVVDDAADATPA-----PAPGARVQL 161 (540)
T ss_pred EEecCCCCCcHHHHHHHHhcCccEEEEccccccccHHHHhhcccccccCCcceEEEeccCcccCCC-----CCccccccc
Confidence 99999999999999999999999999987642 111111 111111111 1000000 000001111
Q ss_pred HhhcCCC--CCCCCCCCCCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHhhhhhhcCCCCcEEEEecchhhHHhHHH
Q 043601 174 IELSGNA--SNFPDVSVKQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTAMDQELAGALDYVTLCVLPMFHVFGLSF 251 (488)
Q Consensus 174 ~~~~~~~--~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (488)
....... ..........+++++++|||||||.||+|++||.++... .......+....++++++.+|++|.+|+ .
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~--~~~~~~~~~~~~~~~~l~~~p~~~~~g~-~ 238 (540)
T PRK06164 162 FALPDPAPPAAAGERAADPDAGALLFTTSGTTSGPKLVLHRQATLLRH--ARAIARAYGYDPGAVLLAALPFCGVFGF-S 238 (540)
T ss_pred ccccccCCcccccccCCCCCceEEEEECCCCCCCCcEEEEehHHHHHH--HHHHHHhcCCCCCCEEEEcCCchhHHHH-H
Confidence 1000000 000112234688999999999999999999999999877 3335555667789999999999999999 6
Q ss_pred HHHHHhhCCceEEEcCCCCHHHHHHHHHhcCccEEEecHHHHHHHHhcCCccCCCCCCCccEEEEcc-CCCcHHHHHHHH
Q 043601 252 VVYAQLQKGNCVVSMRKFDLETALRAIEKYRVTHWWVVPPIILALAKNVSLVKKFDLSSLKGIGSGA-APLRKELVEECS 330 (488)
Q Consensus 252 ~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~v~~~G-~~l~~~~~~~~~ 330 (488)
.++.++..|+++++.+.+++..+++.|+++++|+++++|+++..+.+. .....++++++.+.++| .+...++.+.+.
T Consensus 239 ~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~~~~~p~~l~~l~~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 316 (540)
T PRK06164 239 TLLGALAGGAPLVCEPVFDAARTARALRRHRVTHTFGNDEMLRRILDT--AGERADFPSARLFGFASFAPALGELAALAR 316 (540)
T ss_pred HHHHHHhcCceEEecCCCCHHHHHHHHHHhCCeeecCCHHHHHHHHHh--hcccCCCcceeeeeeccCCcchHHHHHHHh
Confidence 788999999999999889999999999999999999999999999876 23456788999877665 556667777776
Q ss_pred hhCCCCeEEeccCcccccccccccCCCC-CCCCCCceeecC-CCceEEEEeCCCCCCCCCCCcceEEEecC---------
Q 043601 331 KNLPTVTVFQGYGMTETCGVVTVENPLL-GVQNSGSTGTLV-AGVEAQIVCVDTLKPLPPNQVGELWVRGP--------- 399 (488)
Q Consensus 331 ~~~~~~~i~~~YG~tE~~~~~~~~~~~~-~~~~~~~~g~~~-~~~~~~i~d~~~~~~~~~g~~Gel~v~g~--------- 399 (488)
+. ++++++.||+||++.+++...... ......+.|.|. +++.++++|++++++++.|+.|||+++|+
T Consensus 317 ~~--~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~~~~~gY~~~ 394 (540)
T PRK06164 317 AR--GVPLTGLYGSSEVQALVALQPATDPVSVRIEGGGRPASPEARVRARDPQDGALLPDGESGEIEIRAPSLMRGYLDN 394 (540)
T ss_pred hc--CCceecceeeccccceeeccCCCCCCcceeccCccccCCCeEEEEecCCCCcCCCCCCeeEEEEecccccccccCC
Confidence 65 489999999999987665543321 122334567775 79999999988899999999999999984
Q ss_pred ------------CccccceEEEccCCcEEEEcccCcceeeCcEEe---eHhHHHhcCCCeeeeEEEeecCCCCCceEEEE
Q 043601 400 ------------ILMPGDLGYFDEHGQLFIVDRIKELIKCNGFQV---ELEGVLVSHPEILDAVVIPFPDPEAGEVPIAY 464 (488)
Q Consensus 400 ------------~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v---~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~ 464 (488)
||+|||+|+++++|.+++.||.+|+||++|.+| +||.++.++++|.+++|++.+. .+++.++++
T Consensus 395 ~~~t~~~~~~~~~~~TGDl~~~~~~g~l~~~GR~~~~i~~~G~~i~p~eIE~~l~~~~~v~~~~v~~~~~-~~~~~~~~~ 473 (540)
T PRK06164 395 PDATARALTDDGYFRTGDLGYTRGDGQFVYQTRMGDSLRLGGFLVNPAEIEHALEALPGVAAAQVVGATR-DGKTVPVAF 473 (540)
T ss_pred chhhhhcccCCCceecCCeEEEcCCceEEEEeecCCeEEECCEEcCHHHHHHHHHhCCCceeEEEEecCC-CCceeEEEE
Confidence 789999999999999999999999999999999 9999999999999999999884 456789999
Q ss_pred EEeCCCCCCCHHHHHHHHHhhcC
Q 043601 465 VVRSPNSSLTKEDVQKFVANDSQ 487 (488)
Q Consensus 465 v~~~~~~~~~~~~i~~~~~~~l~ 487 (488)
|++.++...+.++++++|+++|+
T Consensus 474 vv~~~~~~~~~~~l~~~~~~~l~ 496 (540)
T PRK06164 474 VIPTDGASPDEAGLMAACREALA 496 (540)
T ss_pred EEeCCCCCCCHHHHHHHHHhhcc
Confidence 99988777889999999999876
No 82
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=100.00 E-value=6e-56 Score=449.00 Aligned_cols=431 Identities=19% Similarity=0.264 Sum_probs=355.8
Q ss_pred CHHHHHhhccccCCCceEEEeCCCCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHHcCCeEe
Q 043601 28 SMVHFLFRNSASYGSKSALIDADSGESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQFPICLLGVIAIGGIAT 107 (488)
Q Consensus 28 ~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v 107 (488)
++.+.|.+.++.+|+++|+.+. ++.+||+||.+++.++|+.|.+.|+++|++|+++++|+.++++++|||+++|++++
T Consensus 1 ~~~~~l~~~a~~~p~~~a~~~~--~~~~ty~el~~~~~~~a~~L~~~g~~~~~~V~i~~~~~~~~~~~~la~~~~G~~~v 78 (502)
T TIGR01734 1 KLIEAIQAFAETYPQTIAYRYQ--GQELTYQQLKEQSDRLAAFIQKRILPKKSPIIVYGHMEPHMLVAFLGSIKSGHAYI 78 (502)
T ss_pred CHHHHHHHHHHHCCCceEEEcC--CcEEeHHHHHHHHHHHHHHHHHhCCCCCCeEEEEeCCCHHHHHHHHHHHHhCCEEe
Confidence 4778999999999999999887 78999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHHHHhhcCCeEEEEccccHHHHhccCCCeEEEcccCcccCCCCcCCCCccchHHHHhhcCCCCCCCCCC
Q 043601 108 TANPVYTVSELSKQVKDSSPKLVVTVPELWERVKDFNIPAVLLGSNHIVSPRGLRSSSNIVYFDELIELSGNASNFPDVS 187 (488)
Q Consensus 108 ~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (488)
|+++.++.+.+..+++..+++.++++.+........ ..+.+. ..+....... +......
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~--~~~~~~-----------------~~~~~~~~~~--~~~~~~~ 137 (502)
T TIGR01734 79 PVDTSIPSERIEMIIEAAGPELVIHTAELSIDAVGT--QIITLS-----------------ALEQAETSGG--PVSFDHA 137 (502)
T ss_pred CCCCcChHHHHHHHHHhcCCCEEEecccccccccCC--ceEEch-----------------HhhhhhhhcC--Ccccccc
Confidence 999999999999999999999999987654332211 111110 1111111111 1111223
Q ss_pred CCCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHhhhhhhcCCCCcEEEEecchhhHHhHHHHHHHHhhCCceEEEcC
Q 043601 188 VKQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTAMDQELAGALDYVTLCVLPMFHVFGLSFVVYAQLQKGNCVVSMR 267 (488)
Q Consensus 188 ~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~~ 267 (488)
..+++.++++|||||||.||+|+++|+++.... ......+....+++++...|++|..++ ..++.++..|+++++.+
T Consensus 138 ~~~~~~~~il~TSGTTG~PK~v~~s~~~~~~~~--~~~~~~~~~~~~~~~l~~~p~~~~~~~-~~~~~~l~~G~~~~~~~ 214 (502)
T TIGR01734 138 VKGDDNYYIIYTSGSTGNPKGVQISHDNLVSFT--NWMLADFPLSEGKQFLNQAPFSFDLSV-MDLYPCLASGGTLHCLD 214 (502)
T ss_pred CCCCCeEEEEECCCCCCCCCEEEEecHHHHHHH--HHHHHhCCCCCCceEEeecCceechhH-HHHHHHHHCCCEEEEcC
Confidence 467899999999999999999999999998763 334444567788999999999999888 67889999999999886
Q ss_pred C---CCHHHHHHHHHhcCccEEEecHHHHHHHHhcCCccCCCCCCCccEEEEccCCCcHHHHHHHHhhCCCCeEEeccCc
Q 043601 268 K---FDLETALRAIEKYRVTHWWVVPPIILALAKNVSLVKKFDLSSLKGIGSGAAPLRKELVEECSKNLPTVTVFQGYGM 344 (488)
Q Consensus 268 ~---~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~i~~~YG~ 344 (488)
+ .++..+++.+++++++.+.++|+++..++.. .......+++++.++++|+++++++.+.+.+.++++.+++.||+
T Consensus 215 ~~~~~~~~~~~~~i~~~~~~~~~~~p~~~~~~l~~-~~~~~~~~~~l~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~yG~ 293 (502)
T TIGR01734 215 KDITNNFKLLFEELPKTGLNVWVSTPSFVDMCLLD-PNFNQENYPHLTHFLFCGEELPVKTAKALLERFPKATIYNTYGP 293 (502)
T ss_pred HHHhcCHHHHHHHHHHcCCeEEEEChhHHHHHHhc-cccccccCCcccEEEEcCCcCCHHHHHHHHHHCCCcEEEeCccC
Confidence 5 5789999999999999999999999887765 33445678899999999999999999999999988999999999
Q ss_pred ccccccccccCC---CCCCCCCCceeecCCCceEEEEeCCCCCCCCCCCcceEEEecC----------------------
Q 043601 345 TETCGVVTVENP---LLGVQNSGSTGTLVAGVEAQIVCVDTLKPLPPNQVGELWVRGP---------------------- 399 (488)
Q Consensus 345 tE~~~~~~~~~~---~~~~~~~~~~g~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~---------------------- 399 (488)
||++..++.... ........++|.|.+++.++|+| +++++++.|+.|||+++|+
T Consensus 294 tE~~~~~~~~~~~~~~~~~~~~~~vg~~~~~~~~~i~~-~~~~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~ 372 (502)
T TIGR01734 294 TEATVAVTSVKITQEILDQYPRLPIGFAKPDMNLFIMD-EEGEPLPEGEKGEIVIVGPSVSKGYLNNPEKTAEAFFSHEG 372 (502)
T ss_pred CcceEEEEEEEccccccccCCccccccccCCCEEEEEC-CCCCCCCCCCeeEEEEccccccccccCCcccchHhheeCCC
Confidence 999754443221 11133445799999999999999 5789999999999999984
Q ss_pred --CccccceEEEccCCcEEEEcccCcceeeCcEEe---eHhHHHhcCCCeeeeEEEeec-CCCCCceEEEEEEeCCCCCC
Q 043601 400 --ILMPGDLGYFDEHGQLFIVDRIKELIKCNGFQV---ELEGVLVSHPEILDAVVIPFP-DPEAGEVPIAYVVRSPNSSL 473 (488)
Q Consensus 400 --~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v---~ie~~l~~~~~v~~~~v~~~~-~~~~~~~~~~~v~~~~~~~~ 473 (488)
|++|||+|+++++ ++++.||.+|+|+.+|++| +||.++.++|.|+++++++.. .....+.++++|++.+....
T Consensus 373 ~~~~~TGDlg~~~~~-~l~i~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~~v~~~~~~~~ 451 (502)
T TIGR01734 373 QPAYRTGDAGTITDG-QLFYQGRLDFQIKLHGYRIELEDIEFNLRQSSYIESAVVVPKYNKDHKVEYLIAAIVPETEDFE 451 (502)
T ss_pred cEEEECCCEEEEECC-EEEEeccccCeEEECcEEeCHHHHHHHHHcCCCccEEEEEEEEcCCCCceEEEEEEEecccccc
Confidence 7899999999876 9999999999999999999 999999999999999999865 44566789999988764322
Q ss_pred C----HHHHHHHHHhhcC
Q 043601 474 T----KEDVQKFVANDSQ 487 (488)
Q Consensus 474 ~----~~~i~~~~~~~l~ 487 (488)
. .++++++++++|+
T Consensus 452 ~~~~~~~~i~~~~~~~l~ 469 (502)
T TIGR01734 452 KEFQLTKAIKKELKKSLP 469 (502)
T ss_pred cchhhHHHHHHHHhhhCh
Confidence 2 2667888888775
No 83
>PRK07868 acyl-CoA synthetase; Validated
Probab=100.00 E-value=7.5e-56 Score=474.70 Aligned_cols=446 Identities=16% Similarity=0.186 Sum_probs=348.7
Q ss_pred CCCCCHHHHHhhccccCCCceEEEeCCCCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHHcC
Q 043601 24 DPNLSMVHFLFRNSASYGSKSALIDADSGESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQFPICLLGVIAIG 103 (488)
Q Consensus 24 ~~~~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G 103 (488)
..++++.++|.++++++|+++|+++. ++.+||+||+++++++|+.|.+.|+++|++|+|+++|++++++++|||+++|
T Consensus 444 ~~~~sl~~ll~~~a~~~pd~~Al~~~--~~~lTY~eL~~ra~rlA~~L~~~Gv~~Gd~VaI~~~n~~e~v~a~lA~~~aG 521 (994)
T PRK07868 444 HTRISLGRIIAEQARDAPKGEFLLFD--GRVHTYEAVNRRINNVVRGLIAVGVRQGDRVGVLMETRPSALVAIAALSRLG 521 (994)
T ss_pred CCCccHHHHHHHHHHHCCCCeEEEeC--CceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcC
Confidence 34589999999999999999999986 6899999999999999999999999999999999999999999999999999
Q ss_pred CeEeecCCCCCHHHHHHHHhhcCCeEEEEccccHHHHhccCCCeEEEcccCcccCCCCcCCCCccchHHHHhhcCCCCC-
Q 043601 104 GIATTANPVYTVSELSKQVKDSSPKLVVTVPELWERVKDFNIPAVLLGSNHIVSPRGLRSSSNIVYFDELIELSGNASN- 182 (488)
Q Consensus 104 ~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 182 (488)
++++|++|. .++.++++.++++++|++.+....+.......+.+........ ..........+++........+.
T Consensus 522 av~vpl~p~---~~l~~il~~s~~~~li~~~~~~~~~~~~~~~iiv~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 597 (994)
T PRK07868 522 AVAVLMPPD---TDLAAAVRLGGVTEIITDPTNLEAARQLPGRVLVLGGGESRDL-DLPDDADVIDMEKIDPDAVELPGW 597 (994)
T ss_pred CEEEEeCCc---hhHHHHHhccCCeEEEEChHHHHHHHhcCceEEEecCCccccc-cCCcchhhhhhhhcCcccccCCcc
Confidence 999999985 5789999999999999998776665443333333221100000 00000011111111100000000
Q ss_pred CCCCCCCCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHhhhhhhcCCCCcEEEEecchhhHHhHHHHHHHHhhCCce
Q 043601 183 FPDVSVKQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTAMDQELAGALDYVTLCVLPMFHVFGLSFVVYAQLQKGNC 262 (488)
Q Consensus 183 ~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~ 262 (488)
.......++++++|+|| ||||.||++.++|.++.... ......+...+++++++.+|++|..++...++..+..|++
T Consensus 598 ~~~~~~~~dd~a~IiyT-gStgtpKpk~vt~~~~~~~~--~~~~~~~~l~~~d~~L~~~Pl~h~~gl~~~l~~~l~gG~~ 674 (994)
T PRK07868 598 YRPNPGLARDLAFIAFS-TAGGELVAKQITNYRWALSA--FGTASAAALDRRDTVYCLTPLHHESGLLVSLGGAVVGGSR 674 (994)
T ss_pred cCCCCCCCCccEEEEEe-CCCCCcCcEEEehHHHHHHH--HhhhhhcCCCCCCeEEEecChHHHhHHHHHHHHHhccceE
Confidence 01112236899999998 57788888878877655432 2233345577899999999999999996666677777888
Q ss_pred EEEcCCCCHHHHHHHHHhcCccEEEecHHHHHHHHhcCCccCCCCCCCccEEEEccCCCcHHHHHHHHhhCCCCeEEecc
Q 043601 263 VVSMRKFDLETALRAIEKYRVTHWWVVPPIILALAKNVSLVKKFDLSSLKGIGSGAAPLRKELVEECSKNLPTVTVFQGY 342 (488)
Q Consensus 263 ~~~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~i~~~Y 342 (488)
+++.++++++.+++.|+++++|+++++|+++..+++. ......++++||.++ |+.+++++.+++.+.|+++.+++.|
T Consensus 675 vvl~~~~~~~~~~~~I~~~~vT~~~~~Ps~l~~L~~~-~~~~~~~~~slr~~~--g~gl~~~l~~~~~~~~~~~~l~~~Y 751 (994)
T PRK07868 675 IALSRGLDPDRFVQEVRQYGVTVVSYTWAMLREVVDD-PAFVLHGNHPVRLFI--GSGMPTGLWERVVEAFAPAHVVEFF 751 (994)
T ss_pred EEecCCCCHHHHHHHHHHhCCcEEEeHHHHHHHHHhC-cCCccCCCCceEEEe--cCCCCHHHHHHHHHHhCchheeeee
Confidence 8887889999999999999999999999999999876 333445677899766 3349999999999999878999999
Q ss_pred CcccccccccccCCCCCCCCCCceeecCCCc-eEEEE--e--------CCCC--CCCCCCCcceEEEecC----------
Q 043601 343 GMTETCGVVTVENPLLGVQNSGSTGTLVAGV-EAQIV--C--------VDTL--KPLPPNQVGELWVRGP---------- 399 (488)
Q Consensus 343 G~tE~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~i~--d--------~~~~--~~~~~g~~Gel~v~g~---------- 399 (488)
|+||++...+ ... ..+.+++|+|+|++ .++|. | .++| ++++.|+.|||+++++
T Consensus 752 G~TE~~~~~~-~~~---~~~~~svG~p~pg~~~v~i~~~d~~~g~li~d~~G~~~~~~~ge~Gel~~~~~~~~~p~~t~~ 827 (994)
T PRK07868 752 ATTDGQAVLA-NVS---GAKIGSKGRPLPGAGRVELAAYDPEHDLILEDDRGFVRRAEVNEVGVLLARARGPIDPTASVK 827 (994)
T ss_pred eccccccccc-ccC---CCCCcccCCccCCCCceeEEEecCcCCceeecCCceEEEcCCCCceEEEEecCCCCChhhhhH
Confidence 9999875433 211 24567899999997 66654 1 1345 5678899999999763
Q ss_pred ---------CccccceEEEccCCcEEEEcccCcceeeCcEEe---eHhHHHhcCCCeeeeEEEeecCCCCCceEEEEEEe
Q 043601 400 ---------ILMPGDLGYFDEHGQLFIVDRIKELIKCNGFQV---ELEGVLVSHPEILDAVVIPFPDPEAGEVPIAYVVR 467 (488)
Q Consensus 400 ---------~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v---~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~ 467 (488)
||+|||+|++|+||+|+|+||+||+||++|.+| +||++|.+||.|.+++|++.+++. ++.++++|++
T Consensus 828 ~~~~~~~dgw~~TGDlg~~d~dG~l~~~GR~dd~Ik~~G~~I~p~EIE~~L~~hp~V~~aaVvg~~d~~-~~~~~a~Vv~ 906 (994)
T PRK07868 828 RGVFAPADTWISTEYLFRRDDDGDYWLVDRRGSVIRTARGPVYTEPVTDALGRIGGVDLAVTYGVEVGG-RQLAVAAVTL 906 (994)
T ss_pred hcccccCCEEEeccceEEEcCCCCEEEeccCCCEEEeCCceEcHHHHHHHHhcCCCeeEEEEEeecCCC-CceEEEEEEe
Confidence 689999999999999999999999999988899 999999999999999999998865 6789999999
Q ss_pred CCCCCCCHHHHHHHHHhhcC
Q 043601 468 SPNSSLTKEDVQKFVANDSQ 487 (488)
Q Consensus 468 ~~~~~~~~~~i~~~~~~~l~ 487 (488)
+++...+.++|++++++ |+
T Consensus 907 ~~~~~~~~~~L~~~l~~-l~ 925 (994)
T PRK07868 907 RPGAAITAADLTEALAS-LP 925 (994)
T ss_pred CCCCcCCHHHHHHHHHh-CC
Confidence 98877889999999985 64
No 84
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=100.00 E-value=2.4e-55 Score=444.79 Aligned_cols=438 Identities=24% Similarity=0.378 Sum_probs=362.4
Q ss_pred HHHhhc-cccCCCceEEEeCCCCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHHcCCeEeec
Q 043601 31 HFLFRN-SASYGSKSALIDADSGESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQFPICLLGVIAIGGIATTA 109 (488)
Q Consensus 31 ~~l~~~-a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l 109 (488)
+++.++ ++.+|+++|+++. +..+||.||.++++++|++|.+.|+++|++|+++++|+++|+++++||+++|++++|+
T Consensus 8 ~~~~~~~~~~~p~~~a~~~~--~~~~ty~~l~~~~~~~a~~L~~~g~~~g~~v~l~~~~~~~~~~~~~a~~~~G~~~v~l 85 (508)
T TIGR02262 8 DLLDRNVVEGRGGKTAFIDD--ISSLSYGELEAQVRRLGAALRRLGVKREERVLLLMLDGVDFPIAFLGAIRAGIVPVAL 85 (508)
T ss_pred HHHHHHHhcccCCceEEEeC--CceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCcEEeec
Confidence 445555 6779999999986 7899999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHhhcCCeEEEEccccHHHHhccC-----CCeEEEcccCcccCCCCcCCCCccchHHHHhhcCCCCCCC
Q 043601 110 NPVYTVSELSKQVKDSSPKLVVTVPELWERVKDFN-----IPAVLLGSNHIVSPRGLRSSSNIVYFDELIELSGNASNFP 184 (488)
Q Consensus 110 ~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (488)
++.++.+.+.++++.++++.++++......+.... ...++.... .......+.++..... ....
T Consensus 86 ~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~--~~~~ 154 (508)
T TIGR02262 86 NTLLTADDYAYMLEDSRARVVFVSGELLPVIKAALGKSPHLEHRVVVGR---------PEAGEVQLAELLATES--EQFK 154 (508)
T ss_pred cCCCCHHHHHHHHHhcCCeEEEEchhhHHHHHHHHhcCCCccEEEEeCC---------CCcccccHHHHhhcCC--CccC
Confidence 99999999999999999999999987666554321 111211111 0011123444433222 2222
Q ss_pred CCCCCCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHhhhhhhcCCCCcEEEEecchhhHHhHHHHHHHHhhCCceEE
Q 043601 185 DVSVKQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTAMDQELAGALDYVTLCVLPMFHVFGLSFVVYAQLQKGNCVV 264 (488)
Q Consensus 185 ~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~ 264 (488)
.....++++++++|||||||.||+|.++|.++....... ........+++.++...|++|..++...++.++..|++++
T Consensus 155 ~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~-~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~~l~~G~~~~ 233 (508)
T TIGR02262 155 PAATQADDPAFWLYSSGSTGMPKGVVHTHSNPYWTAELY-ARNTLGIREDDVVFSAAKLFFAYGLGNALTFPMSVGATTV 233 (508)
T ss_pred CCCCCCCCcEEEEeCCCCCCCCcEEEEechhHHHHHHHH-hHHhcCCCCCCEEEEcCchHHHHHHHHHHHHHHHcCceEE
Confidence 334567899999999999999999999999998763221 2344467888999999999999998777788899999998
Q ss_pred EcCC-CCHHHHHHHHHhcCccEEEecHHHHHHHHhcCCccCCCCCCCccEEEEccCCCcHHHHHHHHhhCCCCeEEeccC
Q 043601 265 SMRK-FDLETALRAIEKYRVTHWWVVPPIILALAKNVSLVKKFDLSSLKGIGSGAAPLRKELVEECSKNLPTVTVFQGYG 343 (488)
Q Consensus 265 ~~~~-~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~i~~~YG 343 (488)
+.++ .++..+++.|++++++++.++|+++..+++. .......+.++|.++++|+++++++.+.|.+.|+ +++++.||
T Consensus 234 ~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~~~~~-~~~~~~~~~~l~~~~~~G~~l~~~~~~~~~~~~~-~~v~~~YG 311 (508)
T TIGR02262 234 LMGERPTPDAVFDRLRRHQPTIFYGVPTLYAAMLAD-PNLPAEDQVRLRLCTSAGEALPAEVGQRWQARFG-VDIVDGIG 311 (508)
T ss_pred EeCCCCCHHHHHHHHHHHCCcEEecchHHHHHHhcC-ccccccccccceeEEEcCCCCCHHHHHHHHHHhC-CchhhCcc
Confidence 8754 6899999999999999999999999888765 3333445678999999999999999999999996 89999999
Q ss_pred cccccccccccCCCCCCCCCCceeecCCCceEEEEeCCCCCCCCCCCcceEEEecC--------------------Cccc
Q 043601 344 MTETCGVVTVENPLLGVQNSGSTGTLVAGVEAQIVCVDTLKPLPPNQVGELWVRGP--------------------ILMP 403 (488)
Q Consensus 344 ~tE~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~--------------------~~~t 403 (488)
+||++.++..+... ....+++|+|++++.++++| +++++++.|+.|||+++|+ |++|
T Consensus 312 ~tE~~~~~~~~~~~--~~~~~~~G~~~~g~~v~i~d-~~~~~~~~g~~Gel~i~~~~~~~gY~~~~~~~~~~~~~~~~~T 388 (508)
T TIGR02262 312 STEMLHIFLSNLPG--DVRYGTSGKPVPGYRLRLVG-DGGQDVAAGEPGELLISGPSSATMYWNNRAKTRDTFQGEWTRS 388 (508)
T ss_pred ccccCceeecCCcc--CCCCCCcCCCCCCcEEEEEC-CCCCCCCCCCeeEEEEecCccccccCCCHHHhHhhhhcCceec
Confidence 99998765544322 34567899999999999999 7899999999999999974 6789
Q ss_pred cceEEEccCCcEEEEcccCcceeeCcEEe---eHhHHHhcCCCeeeeEEEeecCCCCCceEEEEEEeCCCCC---CCHHH
Q 043601 404 GDLGYFDEHGQLFIVDRIKELIKCNGFQV---ELEGVLVSHPEILDAVVIPFPDPEAGEVPIAYVVRSPNSS---LTKED 477 (488)
Q Consensus 404 GD~~~~~~~g~l~~~GR~~d~i~~~G~~v---~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~---~~~~~ 477 (488)
||+++++++|.+++.||.+|+++++|.++ +||+.+.++++|.++++++.++....+.+++++++.++.. ...++
T Consensus 389 GD~~~~~~~g~~~~~gR~~d~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 468 (508)
T TIGR02262 389 GDKYVRNDDGSYTYAGRTDDMLKVSGIYVSPFEIESALIQHPAVLEAAVVGVEDEDGLIKPKAFIVLRPGQDIDTALETE 468 (508)
T ss_pred cceEEEcCCccEEEeccccceeeeCCEEECHHHHHHHHHhCCCeeEEEEEeccccCCCceeEEEEEeCCCCccccccHHH
Confidence 99999999999999999999999999999 9999999999999999999887777788999998876543 34678
Q ss_pred HHHHHHhhcC
Q 043601 478 VQKFVANDSQ 487 (488)
Q Consensus 478 i~~~~~~~l~ 487 (488)
++++++++|+
T Consensus 469 i~~~~~~~l~ 478 (508)
T TIGR02262 469 LKEHVKDRLA 478 (508)
T ss_pred HHHHHHHhcc
Confidence 9999998876
No 85
>PRK12316 peptide synthase; Provisional
Probab=100.00 E-value=2.6e-56 Score=539.12 Aligned_cols=431 Identities=21% Similarity=0.309 Sum_probs=369.3
Q ss_pred CCCHHHHHhhccccCCCceEEEeCCCCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHHcCCe
Q 043601 26 NLSMVHFLFRNSASYGSKSALIDADSGESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQFPICLLGVIAIGGI 105 (488)
Q Consensus 26 ~~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~ 105 (488)
+.++.++|.++++++|+++|+++. ++++||+||.++++++|+.|++.|+++|++|+++++|++++++++|||+++|++
T Consensus 510 ~~~~~~~~~~~a~~~p~~~A~~~~--~~~~TY~eL~~~~~~lA~~L~~~gv~~g~~V~l~~~~s~~~i~~~la~~~aG~~ 587 (5163)
T PRK12316 510 QRGVHRLFEEQVERTPEAPALAFG--EETLDYAELNRRANRLAHALIERGVGPDVLVGVAMERSIEMVVALLAILKAGGA 587 (5163)
T ss_pred CCCHHHHHHHHHHHCCCCeEEEeC--CceEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHcCCE
Confidence 368999999999999999999987 789999999999999999999999999999999999999999999999999999
Q ss_pred EeecCCCCCHHHHHHHHhhcCCeEEEEccccHHHHhcc-CCCeEEEcccCcccCCCCcCCCCccchHHHHhhcCCCCCCC
Q 043601 106 ATTANPVYTVSELSKQVKDSSPKLVVTVPELWERVKDF-NIPAVLLGSNHIVSPRGLRSSSNIVYFDELIELSGNASNFP 184 (488)
Q Consensus 106 ~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (488)
++|++|.++.+++.++++.+++++++++......+... ....+.++.. ........ ...+
T Consensus 588 ~vpld~~~p~~rl~~il~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~--~~~~ 648 (5163)
T PRK12316 588 YVPLDPEYPAERLAYMLEDSGVQLLLSQSHLGRKLPLAAGVQVLDLDRP-----------------AAWLEGYS--EENP 648 (5163)
T ss_pred EeccCccCcHHHHHHHHHhCCCCEEEEChhhhhhCCcccCceEEEecCc-----------------chhhccCC--CCCC
Confidence 99999999999999999999999999997765544322 1122221100 00000001 1122
Q ss_pred CCCCCCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHhhhhhhcCCCCcEEEEecchhhHHhHHHHHHHHhhCCceEE
Q 043601 185 DVSVKQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTAMDQELAGALDYVTLCVLPMFHVFGLSFVVYAQLQKGNCVV 264 (488)
Q Consensus 185 ~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~ 264 (488)
.....++++++|+|||||||.||||+++|.++.+. .......+...++++++...|++|..++ ..++.++..|++++
T Consensus 649 ~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~--~~~~~~~~~~~~~d~~l~~~p~~fd~~~-~~~~~~L~~G~~l~ 725 (5163)
T PRK12316 649 GTELNPENLAYVIYTSGSTGKPKGAGNRHRALSNR--LCWMQQAYGLGVGDTVLQKTPFSFDVSV-WEFFWPLMSGARLV 725 (5163)
T ss_pred CCCCCCCCeEEEEECCCcCCCCCEeeEcCHHHHHH--HHHHHHhcCCCCCCEEEeeCCeehHHHH-HHHHHHHhCCCEEE
Confidence 23456789999999999999999999999999887 4445566777889999999999999998 78899999999999
Q ss_pred EcC---CCCHHHHHHHHHhcCccEEEecHHHHHHHHhcCCccCCCCCCCccEEEEccCCCcHHHHHHHHhhCCCCeEEec
Q 043601 265 SMR---KFDLETALRAIEKYRVTHWWVVPPIILALAKNVSLVKKFDLSSLKGIGSGAAPLRKELVEECSKNLPTVTVFQG 341 (488)
Q Consensus 265 ~~~---~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~i~~~ 341 (488)
+.+ ..++..+++.++++++|++.++|+++..+++. . ...+++++|.+++|||++++++.+.|.+.+++.++++.
T Consensus 726 i~~~~~~~~~~~~~~~i~~~~vt~~~~~Ps~~~~l~~~-~--~~~~~~~l~~~~~gGe~l~~~~~~~~~~~~~~~~l~n~ 802 (5163)
T PRK12316 726 VAAPGDHRDPAKLVELINREGVDTLHFVPSMLQAFLQD-E--DVASCTSLRRIVCSGEALPADAQEQVFAKLPQAGLYNL 802 (5163)
T ss_pred ECCccccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhc-c--ccccCCCccEEEEeeccCCHHHHHHHHHhCCCCeEEeC
Confidence 985 37899999999999999999999999999864 2 23467899999999999999999999988878999999
Q ss_pred cCcccccccccccCCCCCCCCCCceeecCCCceEEEEeCCCCCCCCCCCcceEEEecC----------------------
Q 043601 342 YGMTETCGVVTVENPLLGVQNSGSTGTLVAGVEAQIVCVDTLKPLPPNQVGELWVRGP---------------------- 399 (488)
Q Consensus 342 YG~tE~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~---------------------- 399 (488)
||+||++..++............++|+|++++.++|+| +++++++.|+.|||+|+|+
T Consensus 803 YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d-~~~~~~p~G~~GEl~i~G~~v~~GYl~~~~~t~~~f~~~~~ 881 (5163)
T PRK12316 803 YGPTEAAIDVTHWTCVEEGGDSVPIGRPIANLACYILD-ANLEPVPVGVLGELYLAGRGLARGYHGRPGLTAERFVPSPF 881 (5163)
T ss_pred cCcChheeeeeEEecccccCCCCCCccccCCCEEEEEC-CCCCCCCCCCceEEEecccccChhhCCChhhhhhhCCCCCC
Confidence 99999986544433322234566899999999999999 5789999999999999874
Q ss_pred -----CccccceEEEccCCcEEEEcccCcceeeCcEEe---eHhHHHhcCCCeeeeEEEeecCCCCCceEEEEEEeCCCC
Q 043601 400 -----ILMPGDLGYFDEHGQLFIVDRIKELIKCNGFQV---ELEGVLVSHPEILDAVVIPFPDPEAGEVPIAYVVRSPNS 471 (488)
Q Consensus 400 -----~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v---~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~ 471 (488)
||+|||+|++++||.++++||+||+||++|++| |||.++.++|.|.+++|++.+ ++.++++|+.+++.
T Consensus 882 ~~~~~~y~TGDl~~~~~dG~l~~~GR~d~~ik~~G~rI~~~EIE~~l~~~p~V~~a~V~~~~----~~~lva~vv~~~~~ 957 (5163)
T PRK12316 882 VAGERMYRTGDLARYRADGVIEYAGRIDHQVKLRGLRIELGEIEARLLEHPWVREAAVLAVD----GKQLVGYVVLESEG 957 (5163)
T ss_pred CCCCeeEecCccEEECCCCCEEeecccCCEEEEceEEcChHHHHHHHHhCCCcceEEEEEcC----CCeEEEEEEccCCC
Confidence 688999999999999999999999999999999 999999999999999999886 56899999998876
Q ss_pred CCCHHHHHHHHHhhcCC
Q 043601 472 SLTKEDVQKFVANDSQL 488 (488)
Q Consensus 472 ~~~~~~i~~~~~~~l~~ 488 (488)
....++++++++++|+.
T Consensus 958 ~~~~~~l~~~l~~~Lp~ 974 (5163)
T PRK12316 958 GDWREALKAHLAASLPE 974 (5163)
T ss_pred CCCHHHHHHHHHhhCCC
Confidence 77889999999999873
No 86
>PRK12467 peptide synthase; Provisional
Probab=100.00 E-value=5.2e-56 Score=528.68 Aligned_cols=433 Identities=24% Similarity=0.331 Sum_probs=365.7
Q ss_pred CCHHHHHhhccccCCCceEEEeCCCCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHHcCCeE
Q 043601 27 LSMVHFLFRNSASYGSKSALIDADSGESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQFPICLLGVIAIGGIA 106 (488)
Q Consensus 27 ~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~ 106 (488)
.++.++|.++++.+|+++|+++. ++.+||+||.++++++|+.|.+.|+++|++|+++++|++++++++|||+++|+++
T Consensus 1574 ~~~~~~~~~~a~~~p~~~Av~~~--~~~lTY~eL~~~a~~lA~~L~~~Gv~~~~~V~l~~~~s~~~vv~~lavlkaG~~~ 1651 (3956)
T PRK12467 1574 RLVHQLIEDQAAATPEAVALVFG--EQELTYGELNRRANRLAHRLIALGVGPEVLVGIAVERSLEMVVGLLAILKAGGAY 1651 (3956)
T ss_pred ccHHHHHHHHHHhCCCCeEEEeC--CcEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEccCCHHHHHHHHHhhccCcee
Confidence 68999999999999999999987 7899999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCHHHHHHHHhhcCCeEEEEccccHHHHhccC-CCeEEEcccCcccCCCCcCCCCccchHHHHhhcCCCCCCCC
Q 043601 107 TTANPVYTVSELSKQVKDSSPKLVVTVPELWERVKDFN-IPAVLLGSNHIVSPRGLRSSSNIVYFDELIELSGNASNFPD 185 (488)
Q Consensus 107 v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (488)
+|++|.++.+++.++++++++++++++.+....+.... ...+.++.. ........ ...+.
T Consensus 1652 vpldp~~p~~rl~~il~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~--~~~~~ 1712 (3956)
T PRK12467 1652 VPLDPEYPRERLAYMIEDSGIELLLTQSHLQARLPLPDGLRSLVLDQE-----------------DDWLEGYS--DSNPA 1712 (3956)
T ss_pred eecCCCCCHHHHHHHHHhCCCCEEEeChhhhhhCccccCCcEEEeccc-----------------cchhccCC--CCCCC
Confidence 99999999999999999999999999887655443221 122222111 00111111 11222
Q ss_pred CCCCCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHhhhhhhcCCCCcEEEEecchhhHHhHHHHHHHHhhCCceEEE
Q 043601 186 VSVKQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTAMDQELAGALDYVTLCVLPMFHVFGLSFVVYAQLQKGNCVVS 265 (488)
Q Consensus 186 ~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~ 265 (488)
....++++++|+|||||||.||||+++|.++.+. .......+...++++++...|++|..++ +.++.++..|+++++
T Consensus 1713 ~~~~~~~~ayiiyTSGSTG~PKGV~~th~~l~~~--~~~~~~~~~~~~~d~~l~~~~~~fd~~~-~~~~~~L~~G~~lvi 1789 (3956)
T PRK12467 1713 VNLAPQNLAYVIYTSGSTGRPKGAGNRHGALVNR--LCATQEAYQLSAADVVLQFTSFAFDVSV-WELFWPLINGARLVI 1789 (3956)
T ss_pred CCCCCcCcEEEEECCCcCCCCCEEEEcCHHHHHH--HHHHHHhcCCCcccEEEEecCccHHHHH-HHHHHHHhCCCEEEE
Confidence 3456789999999999999999999999999887 4445566677889999999999999887 788999999999999
Q ss_pred cCC---CCHHHHHHHHHhcCccEEEecHHHHHHHHhcCCccCCCCCCCccEEEEccCCCcHHHHHHHHhhCCCCeEEecc
Q 043601 266 MRK---FDLETALRAIEKYRVTHWWVVPPIILALAKNVSLVKKFDLSSLKGIGSGAAPLRKELVEECSKNLPTVTVFQGY 342 (488)
Q Consensus 266 ~~~---~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~i~~~Y 342 (488)
.++ .++..+++.|+++++|++.++|+++..+... . .....+++||.+++|||++++++.+.|.+.+++..++|.|
T Consensus 1790 ~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~-~-~~~~~~~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~Y 1867 (3956)
T PRK12467 1790 APPGAHRDPEQLIQLIERQQVTTLHFVPSMLQQLLQM-D-EQVEHPLSLRRVVCGGEALEVEALRPWLERLPDTGLFNLY 1867 (3956)
T ss_pred cChhhcCCHHHHHHHHHHcCCeEEECCHHHHHHHHhh-c-cccccCCCceEEEEccccCCHHHHHHHHHhCCCCeEEeCc
Confidence 864 5789999999999999999999999999874 2 2234678999999999999999999999998878999999
Q ss_pred CcccccccccccCCC---CCCCCCCceeecCCCceEEEEeCCCCCCCCCCCcceEEEecC--------------------
Q 043601 343 GMTETCGVVTVENPL---LGVQNSGSTGTLVAGVEAQIVCVDTLKPLPPNQVGELWVRGP-------------------- 399 (488)
Q Consensus 343 G~tE~~~~~~~~~~~---~~~~~~~~~g~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~-------------------- 399 (488)
|+||++..++..... .......++|+|++++.++|+| +++++++.|..|||+++|+
T Consensus 1868 G~TE~t~~~t~~~~~~~~~~~~~~~~iG~p~~~~~~~vld-~~~~~vp~G~~GEl~i~G~~v~~GYl~~p~~t~~~f~~~ 1946 (3956)
T PRK12467 1868 GPTETAVDVTHWTCRRKDLEGRDSVPIGQPIANLSTYILD-ASLNPVPIGVAGELYLGGVGLARGYLNRPALTAERFVAD 1946 (3956)
T ss_pred cCCcCEEeEEEEeccccccccCCCCCcccccCCCEEEEEC-CCCCCCCCCCceEEEeccccccccccCChhhhhhhCcCC
Confidence 999998766543321 1122356899999999999999 6899999999999999873
Q ss_pred --------CccccceEEEccCCcEEEEcccCcceeeCcEEe---eHhHHHhcCCCeeeeEEEeecCCCCCceEEEEEEeC
Q 043601 400 --------ILMPGDLGYFDEHGQLFIVDRIKELIKCNGFQV---ELEGVLVSHPEILDAVVIPFPDPEAGEVPIAYVVRS 468 (488)
Q Consensus 400 --------~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v---~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~ 468 (488)
||+|||+|++++||.++++||+||+||++|++| +||.++.++|+|.+++|++.+ ..+++.++++|+..
T Consensus 1947 p~~~~~~r~yrTGDl~~~~~dG~l~~~GR~D~qVki~G~rIel~eIE~~l~~~p~V~~a~vv~~~-~~~~~~lva~vv~~ 2025 (3956)
T PRK12467 1947 PFGTVGSRLYRTGDLARYRADGVIEYLGRIDHQVKIRGFRIELGEIEARLREQGGVREAVVIAQD-GANGKQLVAYVVPT 2025 (3956)
T ss_pred CCCCCCccceeccceEEECCCCCEEEecccCceEEeCeEEechHHHHHHHHhCCCcceEEEEEec-CCCCcEEEEEEEec
Confidence 588999999999999999999999999999999 999999999999999999986 45667899999986
Q ss_pred CCCCC--------CHHHHHHHHHhhcC
Q 043601 469 PNSSL--------TKEDVQKFVANDSQ 487 (488)
Q Consensus 469 ~~~~~--------~~~~i~~~~~~~l~ 487 (488)
++... ..++++++++++||
T Consensus 2026 ~~~~~~~~~~~~~~~~~l~~~l~~~Lp 2052 (3956)
T PRK12467 2026 DPGLVDDDEAQVALRAILKNHLKASLP 2052 (3956)
T ss_pred CcccccccccccccHHHHHHHHHhhCc
Confidence 54322 35689999998886
No 87
>PRK12316 peptide synthase; Provisional
Probab=100.00 E-value=4e-56 Score=537.47 Aligned_cols=433 Identities=22% Similarity=0.284 Sum_probs=368.0
Q ss_pred CCHHHHHhhccccCCCceEEEeCCCCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHHcCCeE
Q 043601 27 LSMVHFLFRNSASYGSKSALIDADSGESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQFPICLLGVIAIGGIA 106 (488)
Q Consensus 27 ~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~ 106 (488)
.++.++|.++++.+|+++|+++. ++.+||+||+++++++|+.|++.|+++|++|+++++|++++++++|||+++|+++
T Consensus 2003 ~~~~~~~~~~a~~~p~~~A~~~~--~~~lTy~eL~~~a~~lA~~L~~~gv~~g~~V~l~~~~s~~~~~~~lAil~aGa~~ 2080 (5163)
T PRK12316 2003 PGVHQRIAEQAARAPEAIAVVFG--DQHLSYAELDSRANRLAHRLRARGVGPEVRVAIAAERSFELVVALLAVLKAGGAY 2080 (5163)
T ss_pred CCHHHHHHHHHHhCCCCeEEEcC--CCeEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHhhceEE
Confidence 58999999999999999999987 7899999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCHHHHHHHHhhcCCeEEEEccccHHHHhccC-CCeEEEcccCcccCCCCcCCCCccchHHHHhhcCCCCCCCC
Q 043601 107 TTANPVYTVSELSKQVKDSSPKLVVTVPELWERVKDFN-IPAVLLGSNHIVSPRGLRSSSNIVYFDELIELSGNASNFPD 185 (488)
Q Consensus 107 v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (488)
||++|.++.+++.++++++++++++++++....+.... ...+.+.. .... .... ...+.
T Consensus 2081 vpld~~~p~~rl~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~-~~~~--~~~~~ 2140 (5163)
T PRK12316 2081 VPLDPNYPAERLAYMLEDSGAALLLTQRHLLERLPLPAGVARLPLDR-----------------DAEW-ADYP--DTAPA 2140 (5163)
T ss_pred eecCCCCCHHHHHHHHHhcCCCEEEeChhhhhhcccccccceEeccc-----------------hhhh-hccC--ccCCC
Confidence 99999999999999999999999999987655443211 11111110 0000 0001 11222
Q ss_pred CCCCCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHhhhhhhcCCCCcEEEEecchhhHHhHHHHHHHHhhCCceEEE
Q 043601 186 VSVKQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTAMDQELAGALDYVTLCVLPMFHVFGLSFVVYAQLQKGNCVVS 265 (488)
Q Consensus 186 ~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~ 265 (488)
....++++++|+|||||||.||||+++|.++.+. .......+...++++++...|++|..++ ..++.++..|+++++
T Consensus 2141 ~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~--~~~~~~~~~~~~~d~~l~~~~~~fd~~~-~~~~~~L~~G~~~~~ 2217 (5163)
T PRK12316 2141 VQLAGENLAYVIYTSGSTGLPKGVAVSHGALVAH--CQAAGERYELSPADCELQFMSFSFDGAH-EQWFHPLLNGARVLI 2217 (5163)
T ss_pred CCCCCCCeEEEEeCccCCCCCCEeEEccHHHHHH--HHHHHHhcCCCCcceEEEecCchHHHHH-HHHHHHHhCCCEEEe
Confidence 3457899999999999999999999999999887 4445566778889999999999998777 789999999999987
Q ss_pred cCC--CCHHHHHHHHHhcCccEEEecHHHHHHHHhcCCccCCCCCCCccEEEEccCCCcHHHHHHHHhhCCCCeEEeccC
Q 043601 266 MRK--FDLETALRAIEKYRVTHWWVVPPIILALAKNVSLVKKFDLSSLKGIGSGAAPLRKELVEECSKNLPTVTVFQGYG 343 (488)
Q Consensus 266 ~~~--~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~i~~~YG 343 (488)
.+. +++..+++.++++++|+++++|+++..+.+. ... ....++||.+++|||++++++.++|.+.+++.++++.||
T Consensus 2218 ~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~-~~~-~~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG 2295 (5163)
T PRK12316 2218 RDDELWDPEQLYDEMERHGVTILDFPPVYLQQLAEH-AER-DGRPPAVRVYCFGGEAVPAASLRLAWEALRPVYLFNGYG 2295 (5163)
T ss_pred CCcccCCHHHHHHHHHHcCCeEEEcChHHHHHHHhh-hhc-ccCCcceeEEEEecccCCHHHHHHHHHhCCCcEEEECcc
Confidence 753 6899999999999999999999999999875 222 223458999999999999999999999887799999999
Q ss_pred cccccccccccCCCCCC---CCCCceeecCCCceEEEEeCCCCCCCCCCCcceEEEecC---------------------
Q 043601 344 MTETCGVVTVENPLLGV---QNSGSTGTLVAGVEAQIVCVDTLKPLPPNQVGELWVRGP--------------------- 399 (488)
Q Consensus 344 ~tE~~~~~~~~~~~~~~---~~~~~~g~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~--------------------- 399 (488)
+||++..++........ ....++|+|++++.++|+| +++++++.|.+|||+|+|+
T Consensus 2296 ~TE~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d-~~~~~vp~g~~GEl~i~G~~v~~GY~~~p~~T~~~f~~~~ 2374 (5163)
T PRK12316 2296 PTEAVVTPLLWKCRPQDPCGAAYVPIGRALGNRRAYILD-ADLNLLAPGMAGELYLGGEGLARGYLNRPGLTAERFVPDP 2374 (5163)
T ss_pred chhheeeeeeeecccccccCCCcCCcccccCCCEEEEEC-CCCCCCCCCCeeEEEecchhhcccccCChhhhhhhccCCC
Confidence 99998765543322111 1235799999999999999 5789999999999999874
Q ss_pred -------CccccceEEEccCCcEEEEcccCcceeeCcEEe---eHhHHHhcCCCeeeeEEEeecCCCCCceEEEEEEeCC
Q 043601 400 -------ILMPGDLGYFDEHGQLFIVDRIKELIKCNGFQV---ELEGVLVSHPEILDAVVIPFPDPEAGEVPIAYVVRSP 469 (488)
Q Consensus 400 -------~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v---~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~ 469 (488)
||+|||+|++++||.++++||+||+||++|++| |||.++.++|+|.+++|++.++. .++.++++|+.++
T Consensus 2375 ~~~~~~~~yrTGDl~~~~~dG~l~~~GR~d~~iki~G~rie~~eIE~~l~~~~~v~~a~v~~~~~~-~~~~l~a~v~~~~ 2453 (5163)
T PRK12316 2375 FSASGERLYRTGDLARYRADGVVEYLGRIDHQVKIRGFRIELGEIEARLQAHPAVREAVVVAQDGA-SGKQLVAYVVPDD 2453 (5163)
T ss_pred CCCCCCeeEecccEEEEcCCCcEEEecCCCCeEEEcCccCChHHHHHHHhhCcccceEEEEEEecC-CCeEEEEEEEecC
Confidence 588999999999999999999999999999999 99999999999999999998765 7789999999988
Q ss_pred CCCCCHHHHHHHHHhhcCC
Q 043601 470 NSSLTKEDVQKFVANDSQL 488 (488)
Q Consensus 470 ~~~~~~~~i~~~~~~~l~~ 488 (488)
+...+.++++++++++||.
T Consensus 2454 ~~~~~~~~l~~~l~~~Lp~ 2472 (5163)
T PRK12316 2454 AAEDLLAELRAWLAARLPA 2472 (5163)
T ss_pred CCccCHHHHHHHHHhhCch
Confidence 8778899999999998863
No 88
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=2.7e-56 Score=460.25 Aligned_cols=434 Identities=23% Similarity=0.332 Sum_probs=338.5
Q ss_pred CCCHHHHHhhccccCCCceEEEeCC-------CCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHH
Q 043601 26 NLSMVHFLFRNSASYGSKSALIDAD-------SGESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQFPICLLG 98 (488)
Q Consensus 26 ~~~l~~~l~~~a~~~p~~~a~~~~~-------~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA 98 (488)
.+|+.+++.++++++|+++|+++.+ ..+.+||+||.++++++|++|.+. +++||+|+++++|+++|++++||
T Consensus 33 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~g~~~~~Ty~el~~~~~~lA~~L~~~-~~~gd~V~l~~~n~~e~~~~~lA 111 (612)
T PRK12476 33 GTTLISLIERNIANVGDTVAYRYLDHSHSAAGCAVELTWTQLGVRLRAVGARLQQV-AGPGDRVAILAPQGIDYVAGFFA 111 (612)
T ss_pred cCcHHHHHHHHHHhCCCceEEEEEccCCCCCCcceEEeHHHHHHHHHHHHHHHHHh-cCCCCEEEEECCCChhHHHHHHH
Confidence 4799999999999999999998632 124899999999999999999986 99999999999999999999999
Q ss_pred HHHcCCeEeec-CCCCC--HHHHHHHHhhcCCeEEEEccccHHHHhccC-------CCeEEEcccCcccCCCCcCCCCcc
Q 043601 99 VIAIGGIATTA-NPVYT--VSELSKQVKDSSPKLVVTVPELWERVKDFN-------IPAVLLGSNHIVSPRGLRSSSNIV 168 (488)
Q Consensus 99 ~~~~G~~~v~l-~~~~~--~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~ 168 (488)
|+++|++++|+ ++.++ .+++.++++.++++++|++++....+.... ...++.. +.
T Consensus 112 ~~~aG~v~vpl~~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~-------------- 176 (612)
T PRK12476 112 AIKAGTIAVPLFAPELPGHAERLDTALRDAEPTVVLTTTAAAEAVEGFLRNLPRLRRPRVIAI-DA-------------- 176 (612)
T ss_pred HHHcCceeEecCCCCcchhHHHHHHHHHhCCCCEEEEcHHHHHHHHHHHhhcccccCceEEEe-cc--------------
Confidence 99999999999 57766 789999999999999999877655443210 0111111 00
Q ss_pred chHHHHhhcCCCCCCCCCCCCCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHhhhhhhc-CCCCcEEEEecchhhHH
Q 043601 169 YFDELIELSGNASNFPDVSVKQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTAMDQELA-GALDYVTLCVLPMFHVF 247 (488)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 247 (488)
+..... .........++++++|+|||||||.||+|++||+++..+.. .....+. ..++++.++.+|++|..
T Consensus 177 ----~~~~~~--~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~sh~~l~~~~~--~~~~~~~~~~~~~~~l~~~Pl~h~~ 248 (612)
T PRK12476 177 ----IPDSAG--ESFVPVELDTDDVSHLQYTSGSTRPPVGVEITHRAVGTNLV--QMILSIDLLDRNTHGVSWLPLYHDM 248 (612)
T ss_pred ----cccccc--ccccCCCCCCCceEEEEeCCCCCCCCceEEeeHHHHHHHHH--HHHHHhccCCCCceEEEeCCccccc
Confidence 000000 11112234678999999999999999999999999986632 2333444 57788999999999999
Q ss_pred hHHHHHHHHhhCCceEEEcCC----CCHHHHHHHHH--hcCccEEEecHHHHHHHHhcCC---ccCCCCCCCccEEEEcc
Q 043601 248 GLSFVVYAQLQKGNCVVSMRK----FDLETALRAIE--KYRVTHWWVVPPIILALAKNVS---LVKKFDLSSLKGIGSGA 318 (488)
Q Consensus 248 ~~~~~~~~~l~~G~~~~~~~~----~~~~~~~~~l~--~~~~t~l~~~p~~~~~l~~~~~---~~~~~~l~~lr~v~~~G 318 (488)
|+...++..+. |++.++..+ .++..+++.++ +++++.++.+|+++..++.... .....+++++| +++||
T Consensus 249 g~~~~~~~~~~-gg~~~~~~~~~~~~~p~~~~~~i~~~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~l~~lr-~~~gg 326 (612)
T PRK12476 249 GLSMIGFPAVY-GGHSTLMSPTAFVRRPQRWIKALSEGSRTGRVVTAAPNFAYEWAAQRGLPAEGDDIDLSNVV-LIIGS 326 (612)
T ss_pred chHHHHHHHhc-CCeEEEECHHHHHHHHHHHHHHHhhhccCCeEEEeCCcHHHHHHHHhcChhhhcCcchhHhe-EEecc
Confidence 98544444454 445544432 27899999995 5899999999999887776411 11244688999 99999
Q ss_pred CCCcHHHHHHHHhhCC-----CCeEEeccCcccccccccccCCCCC-------------------------CCCCCceee
Q 043601 319 APLRKELVEECSKNLP-----TVTVFQGYGMTETCGVVTVENPLLG-------------------------VQNSGSTGT 368 (488)
Q Consensus 319 ~~l~~~~~~~~~~~~~-----~~~i~~~YG~tE~~~~~~~~~~~~~-------------------------~~~~~~~g~ 368 (488)
+++++++.+.|.+.|+ ...+++.||+||++..++...+... .....++|+
T Consensus 327 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~G~ 406 (612)
T PRK12476 327 EPVSIDAVTTFNKAFAPYGLPRTAFKPSYGIAEATLFVATIAPDAEPSVVYLDREQLGAGRAVRVAADAPNAVAHVSCGQ 406 (612)
T ss_pred cCCCHHHHHHHHHHHHhcCCCccccccccchhhhheeeeccCCCCCceEEEEcHHHhhCCCeeecCCCCCCcceeEeCCC
Confidence 9999999999999873 2358999999998765443322100 012347899
Q ss_pred cCCCceEEEEeCCCCCCCCCCCcceEEEecC---------------------------------------CccccceEEE
Q 043601 369 LVAGVEAQIVCVDTLKPLPPNQVGELWVRGP---------------------------------------ILMPGDLGYF 409 (488)
Q Consensus 369 ~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~---------------------------------------~~~tGD~~~~ 409 (488)
|+++++++|+|++++++++.|+.|||+++|+ |++|||+|++
T Consensus 407 ~~~g~~v~ivd~~~g~~~~~g~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~~~~~~~~g~~~~~~~~~~~w~~TGDlg~~ 486 (612)
T PRK12476 407 VARSQWAVIVDPDTGAELPDGEVGEIWLHGDNIGRGYWGRPEETERTFGAKLQSRLAEGSHADGAADDGTWLRTGDLGVY 486 (612)
T ss_pred cCCCCEEEEEeCCCCcCCCCCCEEEEEEcCCcccccccCChHHHHHHHhhhhccccccccccccccCCCCeeecccccee
Confidence 9999999999965599999999999999872 7899999998
Q ss_pred ccCCcEEEEcccCcceeeCcEEe---eHhHHHhc-CCCeee--eEEEeecCCCCCceEEEEEEeCCCC-CCCHHHHHHHH
Q 043601 410 DEHGQLFIVDRIKELIKCNGFQV---ELEGVLVS-HPEILD--AVVIPFPDPEAGEVPIAYVVRSPNS-SLTKEDVQKFV 482 (488)
Q Consensus 410 ~~~g~l~~~GR~~d~i~~~G~~v---~ie~~l~~-~~~v~~--~~v~~~~~~~~~~~~~~~v~~~~~~-~~~~~~i~~~~ 482 (488)
+||+++|.||+||+||++|++| +||+++.+ ||.|.+ ++|++.+++. ++.++++|+.+++. ..+.++|.+++
T Consensus 487 -~dG~l~i~GR~~d~I~~~G~~I~p~eIE~~l~~~~p~V~~~~v~v~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~ 564 (612)
T PRK12476 487 -LDGELYITGRIADLIVIDGRNHYPQDIEATVAEASPMVRRGYVTAFTVPAED-NERLVIVAERAAGTSRADPAPAIDAI 564 (612)
T ss_pred -ECCEEEEEeccCcEEEECCcccCHHHHHHHHHHhcccccCCcEEEEEecCCC-cceEEEEEEecCCcccccHHHHHHHH
Confidence 5999999999999999999999 99999985 899999 7778887766 78899999988764 35778888887
Q ss_pred HhhcC
Q 043601 483 ANDSQ 487 (488)
Q Consensus 483 ~~~l~ 487 (488)
+++|.
T Consensus 565 ~~~l~ 569 (612)
T PRK12476 565 RAAVS 569 (612)
T ss_pred HHHHH
Confidence 77653
No 89
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=100.00 E-value=8.2e-56 Score=496.32 Aligned_cols=450 Identities=18% Similarity=0.245 Sum_probs=355.7
Q ss_pred CCHHHHHhhccccCCCceEEEeC-------CCCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHH
Q 043601 27 LSMVHFLFRNSASYGSKSALIDA-------DSGESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQFPICLLGV 99 (488)
Q Consensus 27 ~~l~~~l~~~a~~~p~~~a~~~~-------~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~ 99 (488)
.++.++|.++++.+|+++|+++. ..++++||+||+++++++|++|++.|+++|++|+++++|++++++++|||
T Consensus 236 ~~l~~~~~~~a~~~pd~~A~~~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~gv~~g~~V~i~~~~~~~~i~~~lA~ 315 (1389)
T TIGR03443 236 GAIHDIFADNAEKHPDRTCVVETPSFLDPSSKTRSFTYKQINEASNILAHYLLKTGIKRGDVVMIYAYRGVDLVVAVMGV 315 (1389)
T ss_pred CcHHHHHHHHHHhCCCCeEEEeccccccccCCCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEecCCHHHHHHHHHH
Confidence 57999999999999999999863 23578999999999999999999999999999999999999999999999
Q ss_pred HHcCCeEeecCCCCCHHHHHHHHhhcCCeEEEEccccH---HHHhcc---------CCCeEEEcccCcccCCCCcCCCCc
Q 043601 100 IAIGGIATTANPVYTVSELSKQVKDSSPKLVVTVPELW---ERVKDF---------NIPAVLLGSNHIVSPRGLRSSSNI 167 (488)
Q Consensus 100 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~---~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~ 167 (488)
+++|++++|++|.++.+++..+++.+++++++++.+.. ..+... ..+.+.+..+...... ...
T Consensus 316 l~~G~~~vpldp~~p~~~~~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~- 390 (1389)
T TIGR03443 316 LKAGATFSVIDPAYPPARQTIYLSVAKPRALIVIEKAGTLDQLVRDYIDKELELRTEIPALALQDDGSLVGG----SLE- 390 (1389)
T ss_pred HhhCcEEeccCCCCcHHHHHHHHHhcCCCEEEEeccccccchhhhhhhhcccccccccceEEeccccccccc----ccc-
Confidence 99999999999999999999999999999999876421 111110 0111111100000000 000
Q ss_pred cchHHHHhhcC-CCCCCCCCCCCCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHhhhhhhcCCCCcEEEEecchhhH
Q 043601 168 VYFDELIELSG-NASNFPDVSVKQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTAMDQELAGALDYVTLCVLPMFHV 246 (488)
Q Consensus 168 ~~~~~~~~~~~-~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (488)
....+...... ...........++++++|+|||||||.||||+++|+++.+. .......+...++++++...|++|.
T Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~~d~a~ii~TSGSTG~PKgV~~sh~~l~~~--~~~~~~~~~~~~~d~~~~~~~~~~d 468 (1389)
T TIGR03443 391 GGETDVLAPYQALKDTPTGVVVGPDSNPTLSFTSGSEGIPKGVLGRHFSLAYY--FPWMAKRFGLSENDKFTMLSGIAHD 468 (1389)
T ss_pred cccccccccccccccCCCCCcCCCCCceEEEECCCCCCCCCEEEeccHHHHHH--HHHHHHhcCCCCCCEEEEecCceec
Confidence 00000000000 00011112346789999999999999999999999999887 3445556667889999999999998
Q ss_pred HhHHHHHHHHhhCCceEEEcCC---CCHHHHHHHHHhcCccEEEecHHHHHHHHhcCCccCCCCCCCccEEEEccCCCcH
Q 043601 247 FGLSFVVYAQLQKGNCVVSMRK---FDLETALRAIEKYRVTHWWVVPPIILALAKNVSLVKKFDLSSLKGIGSGAAPLRK 323 (488)
Q Consensus 247 ~~~~~~~~~~l~~G~~~~~~~~---~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~v~~~G~~l~~ 323 (488)
.++ ..++.+++.|+++++.+. .++..+++.++++++|+++++|++++.+... ....+++||.+++|||++++
T Consensus 469 ~~~-~~i~~~L~~G~~l~~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~----~~~~~~~lr~~~~gGe~l~~ 543 (1389)
T TIGR03443 469 PIQ-RDMFTPLFLGAQLLVPTADDIGTPGRLAEWMAKYGATVTHLTPAMGQLLSAQ----ATTPIPSLHHAFFVGDILTK 543 (1389)
T ss_pred chH-HHHHHHHhCCCEEEEcChhhccCHHHHHHHHHHhCCeEEEeCHHHHHHHHhc----ccccCCCccEEEEecccCCH
Confidence 877 788999999999999864 3688999999999999999999999988754 23458899999999999999
Q ss_pred HHHHHHHhhCCCCeEEeccCcccccccccccCCCCC---------CCCCCceeecCCCceEEEEeCCC-CCCCCCCCcce
Q 043601 324 ELVEECSKNLPTVTVFQGYGMTETCGVVTVENPLLG---------VQNSGSTGTLVAGVEAQIVCVDT-LKPLPPNQVGE 393 (488)
Q Consensus 324 ~~~~~~~~~~~~~~i~~~YG~tE~~~~~~~~~~~~~---------~~~~~~~g~~~~~~~~~i~d~~~-~~~~~~g~~Ge 393 (488)
...+++.+.++++++++.||+||++..++....... .....++|+|++++.++|+|.++ +++++.|+.||
T Consensus 544 ~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~~G~~GE 623 (1389)
T TIGR03443 544 RDCLRLQTLAENVCIVNMYGTTETQRAVSYFEIPSRSSDSTFLKNLKDVMPAGKGMKNVQLLVVNRNDRTQTCGVGEVGE 623 (1389)
T ss_pred HHHHHHHHhCCCCEEEECccCCccceeEEEEEccccccccchhhcccCcCcCCCccCCCEEEEECCccCCCcCCCCCceE
Confidence 999999988878999999999999876554321110 11345789999999999999643 57899999999
Q ss_pred EEEecC-------------------------------------------------CccccceEEEccCCcEEEEcccCcc
Q 043601 394 LWVRGP-------------------------------------------------ILMPGDLGYFDEHGQLFIVDRIKEL 424 (488)
Q Consensus 394 l~v~g~-------------------------------------------------~~~tGD~~~~~~~g~l~~~GR~~d~ 424 (488)
|+|+|+ ||+|||+|++++||.++|.||.||+
T Consensus 624 L~i~G~~v~~GY~~~p~~t~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~TGDlg~~~~dG~l~~~GR~dd~ 703 (1389)
T TIGR03443 624 IYVRAGGLAEGYLGLPELNAEKFVNNWFVDPSHWIDLDKENNKPEREFWLGPRDRLYRTGDLGRYLPDGNVECCGRADDQ 703 (1389)
T ss_pred EEecccccchhcCCChhHhhhhccCCcccCcccccccccccccccccccCCCccceeecCCceeEcCCCCEEEecccCCE
Confidence 999873 4789999999999999999999999
Q ss_pred eeeCcEEe---eHhHHHhcCCCeeeeEEEeecCCCCCceEEEEEEeCCCC-CC-------------------------CH
Q 043601 425 IKCNGFQV---ELEGVLVSHPEILDAVVIPFPDPEAGEVPIAYVVRSPNS-SL-------------------------TK 475 (488)
Q Consensus 425 i~~~G~~v---~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~-~~-------------------------~~ 475 (488)
||++|++| +||.++.++|.|.+++|++.++...++.++++|++.++. .. ..
T Consensus 704 Iki~G~rI~p~eIE~~l~~~p~V~~a~v~~~~~~~~~~~lva~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 783 (1389)
T TIGR03443 704 VKIRGFRIELGEIDTHLSQHPLVRENVTLVRRDKDEEPTLVSYIVPQDKSDELEEFKSEVDDEESSDPVVKGLIKYRKLI 783 (1389)
T ss_pred EEeCcEEecHHHHHHHHHhCcchheeEEEEeeCCCCCeEEEEEEeccCccccccccccccccccccccchhhhhhhhhhH
Confidence 99999999 999999999999999999888877788999999876321 11 14
Q ss_pred HHHHHHHHhhcCC
Q 043601 476 EDVQKFVANDSQL 488 (488)
Q Consensus 476 ~~i~~~~~~~l~~ 488 (488)
++++++++++|+.
T Consensus 784 ~~l~~~l~~~Lp~ 796 (1389)
T TIGR03443 784 KDIREYLKKKLPS 796 (1389)
T ss_pred HHHHHHHHhhCCc
Confidence 6788999888863
No 90
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=100.00 E-value=7.1e-55 Score=446.49 Aligned_cols=467 Identities=27% Similarity=0.427 Sum_probs=367.2
Q ss_pred eeecCCCCCCC---CCCCCCCHHHHHhhccccCCCceEEEeCCCCcceeHHHHHHHHHHHHHHHH-HcCCCCCCEEEEEc
Q 043601 11 IYRSLRPALVL---PQDPNLSMVHFLFRNSASYGSKSALIDADSGESLTFSQFKSIVIKVSHGFR-HLGVTKHDVVLIFA 86 (488)
Q Consensus 11 ~~~~~~~~~~~---~~~~~~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~-~~g~~~g~~V~i~~ 86 (488)
-|.+-+|+... +.....++.+.|.++++.+|+++|+++. ++.+||+||.++++++|+.|. +.|+++|++|++++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~a~~~~--~~~~Ty~el~~~~~~la~~L~~~~g~~~g~~V~i~~ 83 (560)
T PRK08751 6 PWLQSYPAGVAAEIDLEQFRTVAEVFATSVAKFADRPAYHSF--GKTITYREADQLVEQFAAYLLGELQLKKGDRVALMM 83 (560)
T ss_pred chhhhcCCCCCCccCCcCCCcHHHHHHHHHHhCCCCceEEEC--CceeeHHHHHHHHHHHHHHHHHHhCCCCCCEEEEEC
Confidence 45555555432 2222358999999999999999999986 789999999999999999997 68999999999999
Q ss_pred CCCcchHHHHHHHHHcCCeEeecCCCCCHHHHHHHHhhcCCeEEEEccccHHHHhcc----CCCeEEEcc-cCcccC---
Q 043601 87 PNSIQFPICLLGVIAIGGIATTANPVYTVSELSKQVKDSSPKLVVTVPELWERVKDF----NIPAVLLGS-NHIVSP--- 158 (488)
Q Consensus 87 ~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~----~~~~~~~~~-~~~~~~--- 158 (488)
+|++++++++|||+++|++++|++|.++.+++..+++.++++++++++.....+... ....++... ......
T Consensus 84 ~~~~~~~~~~lA~~~~G~~~v~l~p~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (560)
T PRK08751 84 PNCLQYPIATFGVLRAGLTVVNVNPLYTPRELKHQLIDSGASVLVVIDNFGTTVQQVIADTPVKQVITTGLGDMLGFPKA 163 (560)
T ss_pred CCCHHHHHHHHHHHHhCeEEeccCccCCHHHHHHHHHhcCCeEEEEcchhHHHHHHHhhCCCccEEEEechhhhcccccc
Confidence 999999999999999999999999999999999999999999999998765544332 111121110 000000
Q ss_pred -------------CCCcCCCCccchHHHHhhcCCCCCCCCCCCCCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHhh
Q 043601 159 -------------RGLRSSSNIVYFDELIELSGNASNFPDVSVKQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTAM 225 (488)
Q Consensus 159 -------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~ 225 (488)
...........+.+....... ..........+++++++|||||||.||+|.+||.++...... .
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~--~ 240 (560)
T PRK08751 164 ALVNFVVKYVKKLVPEYRINGAIRFREALALGRK-HSMPTLQIEPDDIAFLQYTGGTTGVAKGAMLTHRNLVANMQQ--A 240 (560)
T ss_pred hhhhhhhhhhhccccccCCCccccHHHHHhccCC-CCCCCCCCCcccEEEEEcCCCCCCCCCEEEEccHHHHHHHHH--H
Confidence 000000111223333322211 112223456789999999999999999999999999876322 2
Q ss_pred hhhhc----CCC-CcEEEEecchhhHHhHHHHHHHHhhCCceEEEc-CCCCHHHHHHHHHhcCccEEEecHHHHHHHHhc
Q 043601 226 DQELA----GAL-DYVTLCVLPMFHVFGLSFVVYAQLQKGNCVVSM-RKFDLETALRAIEKYRVTHWWVVPPIILALAKN 299 (488)
Q Consensus 226 ~~~~~----~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~-~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~ 299 (488)
...+. ... .++++...|++|.+++....+..+..|++.++. .+.++..+++.++++++|++.++|.++..+.+.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~ 320 (560)
T PRK08751 241 HQWLAGTGKLEEGCEVVITALPLYHIFALTANGLVFMKIGGCNHLISNPRDMPGFVKELKKTRFTAFTGVNTLFNGLLNT 320 (560)
T ss_pred HHhhccccccCCCCceEEEecChHHHHHHHHhhhhHhhccceEEEecCcCCHHHHHHHHHhcceeEecChHHHHHHHHcC
Confidence 22221 222 457778899999999865666667777776655 457899999999999999999999999999886
Q ss_pred CCccCCCCCCCccEEEEccCCCcHHHHHHHHhhCCCCeEEeccCcccccccccccCCCCCCCCCCceeecCCCceEEEEe
Q 043601 300 VSLVKKFDLSSLKGIGSGAAPLRKELVEECSKNLPTVTVFQGYGMTETCGVVTVENPLLGVQNSGSTGTLVAGVEAQIVC 379 (488)
Q Consensus 300 ~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d 379 (488)
......+++++|.+++||+++++.+.+.|.+.++ +.+++.||+||++..++.... ......+++|.|++++.++++|
T Consensus 321 -~~~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~~-~~~~~~YG~tE~~~~~~~~~~-~~~~~~~~vG~~~~~~~v~i~d 397 (560)
T PRK08751 321 -PGFDQIDFSSLKMTLGGGMAVQRSVAERWKQVTG-LTLVEAYGLTETSPAACINPL-TLKEYNGSIGLPIPSTDACIKD 397 (560)
T ss_pred -cCcCCcchhhheeeeeCCCCCCHHHHHHHHHHhC-CeEEEeeccccCCCceecccc-cccccCCCcCccCCCceEEEEC
Confidence 4444567889999999999999999999999886 899999999999876654432 2234457899999999999999
Q ss_pred CCCCCCCCCCCcceEEEecC---------------------CccccceEEEccCCcEEEEcccCcceeeCcEEe---eHh
Q 043601 380 VDTLKPLPPNQVGELWVRGP---------------------ILMPGDLGYFDEHGQLFIVDRIKELIKCNGFQV---ELE 435 (488)
Q Consensus 380 ~~~~~~~~~g~~Gel~v~g~---------------------~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v---~ie 435 (488)
+++++++.|+.|||+++|+ ||.|||+|+++++|.+++.||.+|+|+.+|.+| +||
T Consensus 398 -~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~i~GR~~d~i~~~G~~v~p~eiE 476 (560)
T PRK08751 398 -DAGTVLAIGEIGELCIKGPQVMKGYWKRPEETAKVMDADGWLHTGDIARMDEQGFVYIVDRKKDMILVSGFNVYPNEIE 476 (560)
T ss_pred -CCCCCCCCCCceEEEEecCccchhhcCChhhhhhccccCCCccccceEEEcCCceEEEEeechhheeECCEEEcHHHHH
Confidence 6889999999999999885 588999999999999999999999999999999 999
Q ss_pred HHHhcCCCeeeeEEEeecCCCCCceEEEEEEeCCCCCCCHHHHHHHHHhhcC
Q 043601 436 GVLVSHPEILDAVVIPFPDPEAGEVPIAYVVRSPNSSLTKEDVQKFVANDSQ 487 (488)
Q Consensus 436 ~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~~~~~~l~ 487 (488)
+++..+++|.+++|++.++...++.+.++++.+ +...+.++++++++++|+
T Consensus 477 ~~l~~~~~v~~~~v~~~~~~~~ge~~~~~v~~~-~~~~~~~~l~~~~~~~l~ 527 (560)
T PRK08751 477 DVIAMMPGVLEVAAVGVPDEKSGEIVKVVIVKK-DPALTAEDVKAHARANLT 527 (560)
T ss_pred HHHHhCcCeeeeEEEecCCCCCCceEEEEEEcC-CCCCCHHHHHHHHHHhhh
Confidence 999999999999999999888888888877754 445678899999998875
No 91
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=100.00 E-value=2.1e-55 Score=486.77 Aligned_cols=447 Identities=23% Similarity=0.347 Sum_probs=366.4
Q ss_pred CCCHHHHHhhccccCCCceEEEeCCCCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHHcCCe
Q 043601 26 NLSMVHFLFRNSASYGSKSALIDADSGESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQFPICLLGVIAIGGI 105 (488)
Q Consensus 26 ~~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~ 105 (488)
..++.+.+.++++++|+++|+++. .++.+||+||+++++++|+.|.+ ++++||+|+++++|++++++++|||+++|++
T Consensus 614 ~~~l~~~~~~~a~~~p~~~a~~~~-~~~~~Ty~el~~~~~~~a~~L~~-~~~~g~~V~i~~~n~~~~~~~~la~~~~G~v 691 (1146)
T PRK08633 614 LPPLAEAWIDTAKRNWSRLAVADS-TGGELSYGKALTGALALARLLKR-ELKDEENVGILLPPSVAGALANLALLLAGKV 691 (1146)
T ss_pred CCCHHHHHHHHHHhcCCCcEEEcC-CCCcCcHHHHHHHHHHHHHHHHH-hCCCCCeEEEECCCchHHHHHHHHHHHcCCE
Confidence 368999999999999999999874 25799999999999999999987 4899999999999999999999999999999
Q ss_pred EeecCCCCCHHHHHHHHhhcCCeEEEEccccHHHHhccC-------CCeEEEcccCcccCCCCcCCCCccchHHHHhhcC
Q 043601 106 ATTANPVYTVSELSKQVKDSSPKLVVTVPELWERVKDFN-------IPAVLLGSNHIVSPRGLRSSSNIVYFDELIELSG 178 (488)
Q Consensus 106 ~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (488)
++|+++..+.+++.+++++++++.++++++....+.... ...+....+ .. ........+.+......
T Consensus 692 ~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-----~~~~~~~~~~~~~~~~~ 765 (1146)
T PRK08633 692 PVNLNYTASEAALKSAIEQAQIKTVITSRKFLEKLKNKGFDLELPENVKVIYLED-LK-----AKISKVDKLTALLAARL 765 (1146)
T ss_pred EEEeCCCcCHHHHHHHHHHcCCCEEEEcHHHHHHHhccCCchhcccCceEEEeeh-hc-----cccchhHHHHHHHHhcc
Confidence 999999999999999999999999999987766654311 111111111 00 00011111222111110
Q ss_pred CCC----CCCCCCCCCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHhhhhhhcCCCCcEEEEecchhhHHhHHHHHH
Q 043601 179 NAS----NFPDVSVKQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTAMDQELAGALDYVTLCVLPMFHVFGLSFVVY 254 (488)
Q Consensus 179 ~~~----~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (488)
... ........++++++++|||||||.||+|.+||.++.... ......+...++|++++.+|++|..++...++
T Consensus 766 ~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~--~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~ 843 (1146)
T PRK08633 766 LPARLLKRLYGPTFKPDDTATIIFSSGSEGEPKGVMLSHHNILSNI--EQISDVFNLRNDDVILSSLPFFHSFGLTVTLW 843 (1146)
T ss_pred CCHHHHHhhccCCCCCCCEEEEEECCCCCCCCceEEechHHHHHHH--HHHHHhcCCCCCCEEEEcCcHHHHHhHHHHHH
Confidence 000 000134567899999999999999999999999998773 33445566788999999999999999977788
Q ss_pred HHhhCCceEEEcC-CCCHHHHHHHHHhcCccEEEecHHHHHHHHhcCCccCCCCCCCccEEEEccCCCcHHHHHHHHhhC
Q 043601 255 AQLQKGNCVVSMR-KFDLETALRAIEKYRVTHWWVVPPIILALAKNVSLVKKFDLSSLKGIGSGAAPLRKELVEECSKNL 333 (488)
Q Consensus 255 ~~l~~G~~~~~~~-~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~ 333 (488)
.++..|+++++.+ .+++..+++.++++++|++.++|++++.+.+. ......+++++|.+++||+++++++.+.+++.+
T Consensus 844 ~~l~~g~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~-~~~~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~ 922 (1146)
T PRK08633 844 LPLLEGIKVVYHPDPTDALGIAKLVAKHRATILLGTPTFLRLYLRN-KKLHPLMFASLRLVVAGAEKLKPEVADAFEEKF 922 (1146)
T ss_pred HHHHCCCEEEEeCCCCCHHHHHHHHHHcCCeEEEecHHHHHHHHhc-cccCcccCCCeeeEEEcCCcCCHHHHHHHHHHh
Confidence 9999999998875 47899999999999999999999999999876 444556789999999999999999999999999
Q ss_pred CCCeEEeccCcccccccccccCCCC--------CCCCCCceeecCCCceEEEEeCCCCCCCCCCCcceEEEecC------
Q 043601 334 PTVTVFQGYGMTETCGVVTVENPLL--------GVQNSGSTGTLVAGVEAQIVCVDTLKPLPPNQVGELWVRGP------ 399 (488)
Q Consensus 334 ~~~~i~~~YG~tE~~~~~~~~~~~~--------~~~~~~~~g~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~------ 399 (488)
+ .++++.||+||++++++...+.. ...+.+++|+|+|+++++|+|++++++++.|+.|||+++|+
T Consensus 923 g-~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~~~~v~i~d~~~~~~~~~g~~Gel~v~g~~~~~gY 1001 (1146)
T PRK08633 923 G-IRILEGYGATETSPVASVNLPDVLAADFKRQTGSKEGSVGMPLPGVAVRIVDPETFEELPPGEDGLILIGGPQVMKGY 1001 (1146)
T ss_pred C-CCeecccccccCcceEEEecCcccccccccccCCCCCCccccCCCCEEEEEcCCCCccCCCCCceEEEEcCCCccccc
Confidence 6 99999999999987766543221 12356789999999999999988899999999999999873
Q ss_pred ------------------CccccceEEEccCCcEEEEcccCcceeeCcEEe---eHhHHHhcCC--CeeeeEEEeecCCC
Q 043601 400 ------------------ILMPGDLGYFDEHGQLFIVDRIKELIKCNGFQV---ELEGVLVSHP--EILDAVVIPFPDPE 456 (488)
Q Consensus 400 ------------------~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v---~ie~~l~~~~--~v~~~~v~~~~~~~ 456 (488)
|++|||+|++|+||++++.||.||+||++|++| +||+++.+|| .+.+++|++.+++.
T Consensus 1002 ~~~~~~t~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~gR~~d~i~~~G~~v~~~eiE~~l~~~~~~~~~~~~v~~~~~~~ 1081 (1146)
T PRK08633 1002 LGDPEKTAEVIKDIDGIGWYVTGDKGHLDEDGFLTITDRYSRFAKIGGEMVPLGAVEEELAKALGGEEVVFAVTAVPDEK 1081 (1146)
T ss_pred cCCccchHHHhhcCCCCCeEECCCEEEEcCCceEEEEecccchhhhCcEEECHHHHHHHHHhccCCCCceEEEEeccCCC
Confidence 688999999999999999999999999999999 9999999998 56789999999998
Q ss_pred CCceEEEEEEeCCCCCCCHHHHHHHHHh-hcC
Q 043601 457 AGEVPIAYVVRSPNSSLTKEDVQKFVAN-DSQ 487 (488)
Q Consensus 457 ~~~~~~~~v~~~~~~~~~~~~i~~~~~~-~l~ 487 (488)
.++.++++++.. ..+.+++++++++ +++
T Consensus 1082 ~g~~~~~~v~~~---~~~~~~l~~~~~~~~l~ 1110 (1146)
T PRK08633 1082 KGEKLVVLHTCG---AEDVEELKRAIKESGLP 1110 (1146)
T ss_pred CCcEEEEEEecC---ccCHHHHHHHHHhcCCC
Confidence 899999998863 3467889988875 354
No 92
>PRK13390 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=4.1e-55 Score=442.32 Aligned_cols=433 Identities=25% Similarity=0.339 Sum_probs=344.7
Q ss_pred hccccCCCceEEEeCCCCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHHcCCeEeecCCCCC
Q 043601 35 RNSASYGSKSALIDADSGESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQFPICLLGVIAIGGIATTANPVYT 114 (488)
Q Consensus 35 ~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~ 114 (488)
.+|+.+|+++|+.+.++++.+||+||.++++++|+.|.++|+++||+|+++++|++++++++|||+++|++++|+++.++
T Consensus 5 ~~a~~~p~~~a~~~~~~~~~lTy~el~~~~~~la~~L~~~gv~~gd~V~i~~~n~~~~~~~~la~~~~Ga~~~~l~~~~~ 84 (501)
T PRK13390 5 THAQIAPDRPAVIVAETGEQVSYRQLDDDSAALARVLYDAGLRTGDVVALLSDNSPEALVVLWAALRSGLYITAINHHLT 84 (501)
T ss_pred hhhhhCCCCcEEEecCCCeEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEeccccCCC
Confidence 35778999999987655789999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcCCeEEEEccccHHHHhccCC--CeEEEcccCcccCCCCcCCCCccchHHHHhhcCCCCCCCCCCCCCCC
Q 043601 115 VSELSKQVKDSSPKLVVTVPELWERVKDFNI--PAVLLGSNHIVSPRGLRSSSNIVYFDELIELSGNASNFPDVSVKQTD 192 (488)
Q Consensus 115 ~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (488)
.+++.++++.++++++++++........... ........ .......+++...... . .....++
T Consensus 85 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~--~----~~~~~~~ 149 (501)
T PRK13390 85 APEADYIVGDSGARVLVASAALDGLAAKVGADLPLRLSFGG---------EIDGFGSFEAALAGAG--P----RLTEQPC 149 (501)
T ss_pred HHHHHHHHHhcCCcEEEEcchhhhHHHHhhhccceEEEecC---------cccccccHHHHhcccC--C----CCCCCcc
Confidence 9999999999999999998765433222111 11111000 0111222333222111 0 0112235
Q ss_pred EEEEEcccCCCCCCchhhh--ccHHHHHHhh--HHhhhhhhcCCCCcEEEEecchhhHHhHHHHHHHHhhCCceEEEcCC
Q 043601 193 TAALLYSSGTTGVGKGAIL--THKNFIASSL--MTAMDQELAGALDYVTLCVLPMFHVFGLSFVVYAQLQKGNCVVSMRK 268 (488)
Q Consensus 193 ~a~i~~TSGtTG~pK~v~~--t~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~~~ 268 (488)
+++|+|||||||.||+|++ +|.++..... .......+....+++++..+|++|..++.. ....+..|+++++.+.
T Consensus 150 ~a~i~~TSGTTG~PKgV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~h~~~~~~-~~~~~~~g~~~~~~~~ 228 (501)
T PRK13390 150 GAVMLYSSGTTGFPKGIQPDLPGRDVDAPGDPIVAIARAFYDISESDIYYSSAPIYHAAPLRW-CSMVHALGGTVVLAKR 228 (501)
T ss_pred cEEEEeCCCCCCCCCEEEeeccccccccchhhhHhhHHHHhCCCCCCeEEecccchhhhHHHH-HHHHHhcCceEEEcCC
Confidence 7999999999999999996 4544433210 111223455678899999999999988743 3445678999999888
Q ss_pred CCHHHHHHHHHhcCccEEEecHHHHHHHHhcCCc-cCCCCCCCccEEEEccCCCcHHHHHHHHhhCCCCeEEeccCcccc
Q 043601 269 FDLETALRAIEKYRVTHWWVVPPIILALAKNVSL-VKKFDLSSLKGIGSGAAPLRKELVEECSKNLPTVTVFQGYGMTET 347 (488)
Q Consensus 269 ~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~-~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~i~~~YG~tE~ 347 (488)
+++..+++.|+++++|++.++|+++..+.+.... ....+++++|.+++||+++++++.+.+.+.++ ..+++.||+||+
T Consensus 229 ~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~l~~v~~~g~~~~~~~~~~~~~~~~-~~~~~~YG~tE~ 307 (501)
T PRK13390 229 FDAQATLGHVERYRITVTQMVPTMFVRLLKLDADVRTRYDVSSLRAVIHAAAPCPVDVKHAMIDWLG-PIVYEYYSSTEA 307 (501)
T ss_pred cCHHHHHHHHHHcCCeEEEecHHHHHHHHhccchhcccCChhhhheEEEcCCCCCHHHHHHHHHhcC-Cceeeeeccccc
Confidence 8999999999999999999999999998875211 23456789999999999999999999999886 889999999999
Q ss_pred cccccccCCCCCCCCCCceeecCCCceEEEEeCCCCCCCCCCCcceEEEecC-----------------------Ccccc
Q 043601 348 CGVVTVENPLLGVQNSGSTGTLVAGVEAQIVCVDTLKPLPPNQVGELWVRGP-----------------------ILMPG 404 (488)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~-----------------------~~~tG 404 (488)
++++...... .....+++|+|+++ .++++| +++++++.|+.|||+++|+ |++||
T Consensus 308 ~~~~~~~~~~-~~~~~~~~G~~~~g-~~~i~d-~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~t~~~~~~~~~~w~~tG 384 (501)
T PRK13390 308 HGMTFIDSPD-WLAHPGSVGRSVLG-DLHICD-DDGNELPAGRIGTVYFERDRLPFRYLNDPEKTAAAQHPAHPFWTTVG 384 (501)
T ss_pred CceEEecchh-hccCCCCcCCcccc-eEEEEC-CCCCCCCCCCceEEEEecCCccccccCChhhhHHhhccCCCceEEcC
Confidence 8654433221 12456789999999 699999 6889999999999999874 56899
Q ss_pred ceEEEccCCcEEEEcccCcceeeCcEEe---eHhHHHhcCCCeeeeEEEeecCCCCCceEEEEEEeCCCCCCC---HHHH
Q 043601 405 DLGYFDEHGQLFIVDRIKELIKCNGFQV---ELEGVLVSHPEILDAVVIPFPDPEAGEVPIAYVVRSPNSSLT---KEDV 478 (488)
Q Consensus 405 D~~~~~~~g~l~~~GR~~d~i~~~G~~v---~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~---~~~i 478 (488)
|+|++++||.+++.||.||+||.+|.+| +||+++.++|.|.+++|++.+++..++.++++|++.++...+ .+++
T Consensus 385 Dl~~~~~dg~l~~~gR~~~~i~~~G~~v~p~eIE~~l~~~~~v~~~~v~~~~~~~~~e~~~~~v~~~~~~~~~~~~~~~l 464 (501)
T PRK13390 385 DLGSVDEDGYLYLADRKSFMIISGGVNIYPQETENALTMHPAVHDVAVIGVPDPEMGEQVKAVIQLVEGIRGSDELAREL 464 (501)
T ss_pred ceEEECCCCeEEEeeccccceeECCeeeCHHHHHHHHHhCCCeeEEEEEeccCcccCceeEEEEEecCCCCcchhhHHHH
Confidence 9999999999999999999999999999 999999999999999999999988889999999987764433 4688
Q ss_pred HHHHHhhcC
Q 043601 479 QKFVANDSQ 487 (488)
Q Consensus 479 ~~~~~~~l~ 487 (488)
+++++++|+
T Consensus 465 ~~~~~~~l~ 473 (501)
T PRK13390 465 IDYTRSRIA 473 (501)
T ss_pred HHHHHHhcc
Confidence 899988876
No 93
>KOG1175 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=5.9e-56 Score=430.71 Aligned_cols=442 Identities=27% Similarity=0.417 Sum_probs=360.9
Q ss_pred CCCceEEEeCC----CCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHHcCCeEeecCCCCCH
Q 043601 40 YGSKSALIDAD----SGESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQFPICLLGVIAIGGIATTANPVYTV 115 (488)
Q Consensus 40 ~p~~~a~~~~~----~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~ 115 (488)
.+++++++... +...+||+|+.+++.++|+.|.+.|+++||+|++++|+.+++++++|||.++|++.+++-..++.
T Consensus 78 ~~~~~a~~~~~~~~~~~~~~t~~el~~~v~~~a~~l~~~g~~kGD~V~~~mPm~~e~~ia~lA~~r~Gai~~~v~~~fs~ 157 (626)
T KOG1175|consen 78 GGDKVAIIFEGNEGGDTEVWTYKELLDQVVRLANVLRKCGLKKGDTVAIYMPMIPEAVIAMLACARIGAIHSSVFAGFSA 157 (626)
T ss_pred CCCCcEEEEEecCCCceEEEEHHHHHHHHHHHHHHHHhcCCCCCcEEEEeccCChHHHHHHHHHhhcCeEEEEeeccCCH
Confidence 47888887542 12458999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCeEEEEccccHHHHhccCCCeEEEcccCccc--------CCCCcCCCCccchHHHHhhcCCCCCCCCCC
Q 043601 116 SELSKQVKDSSPKLVVTVPELWERVKDFNIPAVLLGSNHIVS--------PRGLRSSSNIVYFDELIELSGNASNFPDVS 187 (488)
Q Consensus 116 ~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (488)
.++...++.++++.+|+.+......+......+......... ..-.....+...++..+.... +..++..
T Consensus 158 ~~l~~Rl~~~~~k~i~t~d~~~~~~k~i~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~a~--~~~~~~~ 235 (626)
T KOG1175|consen 158 KELLDRLQDSKAKVIITQDVVARGGKSINLKCIVLEALLLVSDKSRPVWLDLIVSRRNRDLFWSLELKKAS--PEHPCVP 235 (626)
T ss_pred HHHHHHHHhcCCCEEEEEeeeccCCCccchhhhHHHHhhcccccccccceeeEEecccccccHHHHhhhcC--CCCCcee
Confidence 999999999999999998765543333221111000000000 000001111334555544444 4555778
Q ss_pred CCCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHhhhhhhcCCCCcEEEEecchhhHHhHHHHHHHHhhCCceEEEcC
Q 043601 188 VKQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTAMDQELAGALDYVTLCVLPMFHVFGLSFVVYAQLQKGNCVVSMR 267 (488)
Q Consensus 188 ~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~~ 267 (488)
.+.+++.+|+|||||||.||++.+++....-.+ +......+..+++|+.++.....|+.+.++..+.+|+.|+++++.+
T Consensus 236 ~~~edpl~IlfTSGtTg~PK~v~ht~~g~ll~~-~~~~~~~~d~q~~dv~~~~~d~GWi~g~~~~~~gpl~~Ga~~vl~~ 314 (626)
T KOG1175|consen 236 VKAEDPLFILFTSGTTGKPKGVIHTTGGYLLGA-ALTSRYHFDLQPSDVLWCASDLGWITGHSYVLYGPLLNGATVVLYE 314 (626)
T ss_pred cCccCceEEEecCCCCCCCCceeeccCcchHHH-hhhcceeccCCCcceEEEecccCeeeccchhhhhhhhcCcEEEEEc
Confidence 899999999999999999999999998665442 3335566778999999999999999999888999999999999985
Q ss_pred --CCCHHHHHHHHHhcCccEEEecHHHHHHHHhcCCccC--CCCCCCccEEEEccCCCcHHHHHHHHhhCCCCeEEeccC
Q 043601 268 --KFDLETALRAIEKYRVTHWWVVPPIILALAKNVSLVK--KFDLSSLKGIGSGAAPLRKELVEECSKNLPTVTVFQGYG 343 (488)
Q Consensus 268 --~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~--~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~i~~~YG 343 (488)
++++..+++.+.++++|.+++.|+.++.+.+. .... ..++++||++.++||+++++..+.+.+.++...+.+.||
T Consensus 315 g~p~~~~~~~~~v~k~~it~l~t~pt~~r~l~~~-~~~~~~~~~~~sLk~~~S~Gepi~~~~~ew~~~~~~~~pv~e~~~ 393 (626)
T KOG1175|consen 315 GPPFDPGRIWKILDKYKVTVLYTAPTAYRLLRRL-GQEDVTSYSLKSLRTCGSVGEPINPEAWEWWKRVTGLDPIYETYG 393 (626)
T ss_pred CCCCChhhhhhhHhhcceEEEEeccHHHHHHHHh-ccccccccccceEEEEeecCccCCcchHHHHHHhcCccchhhcee
Confidence 35899999999999999999999999987766 3222 344467999999999999999999999997336999999
Q ss_pred cccccccccccCCCCCCCCCCceeecCCCceEEEEeCCCCCCCCCC-CcceEEEecC-----------------------
Q 043601 344 MTETCGVVTVENPLLGVQNSGSTGTLVAGVEAQIVCVDTLKPLPPN-QVGELWVRGP----------------------- 399 (488)
Q Consensus 344 ~tE~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d~~~~~~~~~g-~~Gel~v~g~----------------------- 399 (488)
+||+|..+..........++++.+.|++++.+.|.| ++|++++.+ +.|+|+++.+
T Consensus 394 qtEtG~~~i~~~~g~~p~~pg~~~~p~~g~~v~i~d-e~g~~~~~~~~~G~l~~~~~~P~~~~r~~~~n~erf~~~yf~k 472 (626)
T KOG1175|consen 394 QTETGGICITPKPGKLPIKPGSAGKPFPGYDVQILD-ENGNELPPSTGNGELRLKPPWPPGMFRTLWGNHERFRAAYFKK 472 (626)
T ss_pred eeccCceeeeccCCCCCcCccccCCCCCCcceEEEC-CCCCCcCCCCceeEEEEeCCCCccccccccCCHHHhhhhhccc
Confidence 999998888766553358899999999999999999 589988876 8899999876
Q ss_pred ---CccccceEEEccCCcEEEEcccCcceeeCcEEe---eHhHHHhcCCCeeeeEEEeecCCCCCceEEEEEEeCCCCCC
Q 043601 400 ---ILMPGDLGYFDEHGQLFIVDRIKELIKCNGFQV---ELEGVLVSHPEILDAVVIPFPDPEAGEVPIAYVVRSPNSSL 473 (488)
Q Consensus 400 ---~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v---~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~ 473 (488)
.|+|||.+++|+||++++.||.||+|+++|+++ |||+++.+||.|.|++|++.+++..+|.+++||+++++. .
T Consensus 473 ~pg~y~tGD~~~rd~dGY~~i~GR~DDviNvsGhRigtaEIE~al~~hp~VaEsAvVg~p~~~~ge~v~aFvvl~~g~-~ 551 (626)
T KOG1175|consen 473 FPGYYFTGDGGRRDEDGYYWILGRVDDVINVSGHRIGTAEIESALVEHPAVAESAVVGSPDPIKGEVVLAFVVLKSGS-H 551 (626)
T ss_pred CCceEEecCceEEcCCceEEEEecccccccccceeecHHHHHHHHhhCcchhheeeecCCCCCCCeEEEEEEEEcCCC-C
Confidence 356799999999999999999999999999999 999999999999999999999999999999999999984 4
Q ss_pred CHHH----HHHHHHhhcC
Q 043601 474 TKED----VQKFVANDSQ 487 (488)
Q Consensus 474 ~~~~----i~~~~~~~l~ 487 (488)
+.++ |++++|+.++
T Consensus 552 ~~~~L~kel~~~VR~~ig 569 (626)
T KOG1175|consen 552 DPEQLTKELVKHVRSVIG 569 (626)
T ss_pred ChHHHHHHHHHHHHhhcC
Confidence 4444 5555555543
No 94
>PRK07787 acyl-CoA synthetase; Validated
Probab=100.00 E-value=9e-55 Score=436.05 Aligned_cols=405 Identities=26% Similarity=0.360 Sum_probs=340.1
Q ss_pred cccCCCceEEEeCCCCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHHcCCeEeecCCCCCHH
Q 043601 37 SASYGSKSALIDADSGESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQFPICLLGVIAIGGIATTANPVYTVS 116 (488)
Q Consensus 37 a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~ 116 (488)
+.+.++++|+++. ++++||+||.++++++|..|+ ++++|+++++|++++++++|||+++|++++|+++.++.+
T Consensus 10 ~~~~~~~~a~~~~--~~~~Ty~el~~~~~~~a~~L~-----~~~~V~l~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~ 82 (471)
T PRK07787 10 AAAADIADAVRIG--GRVLSRSDLAGAATAVAERVA-----GARRVAVLATPTLATVLAVVGALIAGVPVVPVPPDSGVA 82 (471)
T ss_pred hcccCCceEEEeC--CcEEEHHHHHHHHHHHHHHhc-----cCCEEEEECCCCHHHHHHHHHHHhcCcEEeecCCCCChH
Confidence 4567899999987 789999999999999999996 469999999999999999999999999999999999999
Q ss_pred HHHHHHhhcCCeEEEEccccHHHHhccCCCeEEEcccCcccCCCCcCCCCccchHHHHhhcCCCCCCCCCCCCCCCEEEE
Q 043601 117 ELSKQVKDSSPKLVVTVPELWERVKDFNIPAVLLGSNHIVSPRGLRSSSNIVYFDELIELSGNASNFPDVSVKQTDTAAL 196 (488)
Q Consensus 117 ~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i 196 (488)
++..+++.+++++++++.+... ...+....... .. .........+++++++
T Consensus 83 ~l~~~l~~~~~~~il~~~~~~~----~~~~~~~~~~~-------------~~------------~~~~~~~~~~~~~a~i 133 (471)
T PRK07787 83 ERRHILADSGAQAWLGPAPDDP----AGLPHVPVRLH-------------AR------------SWHRYPEPDPDAPALI 133 (471)
T ss_pred HHHHHHHhcCCCEEEecCCccc----ccccceeeecc-------------cc------------ccccCCCCCCCceEEE
Confidence 9999999999999999864210 00110000000 00 0001112456899999
Q ss_pred EcccCCCCCCchhhhccHHHHHHhhHHhhhhhhcCCCCcEEEEecchhhHHhHHHHHHHHhhCCceEEEcCCCCHHHHHH
Q 043601 197 LYSSGTTGVGKGAILTHKNFIASSLMTAMDQELAGALDYVTLCVLPMFHVFGLSFVVYAQLQKGNCVVSMRKFDLETALR 276 (488)
Q Consensus 197 ~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~ 276 (488)
+|||||||.||+|+++|.++... .......+...++++++..+|++|..|+...++.++..|+++++.+..++..+++
T Consensus 134 ~~TSGTTG~PK~v~~t~~~l~~~--~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~ 211 (471)
T PRK07787 134 VYTSGTTGPPKGVVLSRRAIAAD--LDALAEAWQWTADDVLVHGLPLFHVHGLVLGVLGPLRIGNRFVHTGRPTPEAYAQ 211 (471)
T ss_pred EECCCCCCCCCEEEEeHHHHHHH--HHHHHHhcCCCccceeEeccCCeeechhHHHHHHHHhcCCEEEecCCCCHHHHHH
Confidence 99999999999999999999877 3334455567788999999999999999888999999999999998899999999
Q ss_pred HHHhcCccEEEecHHHHHHHHhcCCccCCCCCCCccEEEEccCCCcHHHHHHHHhhCCCCeEEeccCcccccccccccCC
Q 043601 277 AIEKYRVTHWWVVPPIILALAKNVSLVKKFDLSSLKGIGSGAAPLRKELVEECSKNLPTVTVFQGYGMTETCGVVTVENP 356 (488)
Q Consensus 277 ~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~i~~~YG~tE~~~~~~~~~~ 356 (488)
.++ ++++++.++|+.+..+++. .. ....++++|.+++||+++++++.+.|.+.++ ..+++.||+||++...+....
T Consensus 212 ~i~-~~~t~~~~~P~~~~~l~~~-~~-~~~~l~~l~~~~~gg~~~~~~~~~~~~~~~~-~~~~~~YG~tE~~~~~~~~~~ 287 (471)
T PRK07787 212 ALS-EGGTLYFGVPTVWSRIAAD-PE-AARALRGARLLVSGSAALPVPVFDRLAALTG-HRPVERYGMTETLITLSTRAD 287 (471)
T ss_pred HHh-hCceEEEcchHHHHHHHhC-cc-ccccccceeEEEECCCCCCHHHHHHHHHHcC-CCeecccCccccCcceecCCC
Confidence 999 9999999999999999875 22 2346789999999999999999999999886 899999999999865443322
Q ss_pred CCCCCCCCceeecCCCceEEEEeCCCCCCCC-CCC-cceEEEecC---------------------CccccceEEEccCC
Q 043601 357 LLGVQNSGSTGTLVAGVEAQIVCVDTLKPLP-PNQ-VGELWVRGP---------------------ILMPGDLGYFDEHG 413 (488)
Q Consensus 357 ~~~~~~~~~~g~~~~~~~~~i~d~~~~~~~~-~g~-~Gel~v~g~---------------------~~~tGD~~~~~~~g 413 (488)
.....+++|+|++++.++|+|+ ++++++ .|+ .|||+++|+ |++|||+|++++||
T Consensus 288 --~~~~~~~vG~~~~g~~~~i~d~-~~~~~~~~~~~~Gei~v~g~~~~~gy~~~~~~t~~~~~~~~~~~TGDlg~~~~dg 364 (471)
T PRK07787 288 --GERRPGWVGLPLAGVETRLVDE-DGGPVPHDGETVGELQVRGPTLFDGYLNRPDATAAAFTADGWFRTGDVAVVDPDG 364 (471)
T ss_pred --CcccCCcccccCCCcEEEEECC-CCCCCCCCCCCceEEEEECcccchhhcCChhhchhcccCCCceecCceEEEcCCC
Confidence 2345678999999999999994 578876 344 799999974 68999999999999
Q ss_pred cEEEEccc-CcceeeCcEEe---eHhHHHhcCCCeeeeEEEeecCCCCCceEEEEEEeCCCCCCCHHHHHHHHHhhcCC
Q 043601 414 QLFIVDRI-KELIKCNGFQV---ELEGVLVSHPEILDAVVIPFPDPEAGEVPIAYVVRSPNSSLTKEDVQKFVANDSQL 488 (488)
Q Consensus 414 ~l~~~GR~-~d~i~~~G~~v---~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~~~~~~l~~ 488 (488)
.+++.||+ +++++.+|.+| +||+++.+++.|.+++|++.++...++.++++|+..+ ..+.++++++++++|+.
T Consensus 365 ~l~~~GR~~d~~i~~~G~~v~~~eIE~~l~~~~~v~~~~v~~~~~~~~~~~~~a~v~~~~--~~~~~~l~~~l~~~l~~ 441 (471)
T PRK07787 365 MHRIVGRESTDLIKSGGYRIGAGEIETALLGHPGVREAAVVGVPDDDLGQRIVAYVVGAD--DVAADELIDFVAQQLSV 441 (471)
T ss_pred CEEEeCCCCceeEeeCCEEECHHHHHHHHHhCCCcceEEEEcccccccCeEEEEEEEeCC--CCCHHHHHHHHHhhccc
Confidence 99999996 89999999999 9999999999999999999998888899999999843 36788999999988763
No 95
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=7.6e-54 Score=438.69 Aligned_cols=454 Identities=30% Similarity=0.460 Sum_probs=361.1
Q ss_pred CCCHHHHHhhccccCCCceEEEeCCCCcceeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCCcchHHHHHHHHHcCC
Q 043601 26 NLSMVHFLFRNSASYGSKSALIDADSGESLTFSQFKSIVIKVSHGFRH-LGVTKHDVVLIFAPNSIQFPICLLGVIAIGG 104 (488)
Q Consensus 26 ~~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~-~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~ 104 (488)
..++.++|..+++.+|+++|+.+. ++++||.||.++++++|.+|.+ .|+++|++|+++++|++++++++|||+++|+
T Consensus 22 ~~~l~~~l~~~a~~~p~~~a~~~~--~~~lTy~~l~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~ 99 (560)
T PRK08974 22 YQSLVDMFEQAVARYADQPAFINM--GEVMTFRKLEERSRAFAAYLQNGLGLKKGDRVALMMPNLLQYPIALFGILRAGM 99 (560)
T ss_pred cccHHHHHHHHHHhCCCCceEEEC--CccccHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCc
Confidence 357999999999999999999986 7899999999999999999984 8999999999999999999999999999999
Q ss_pred eEeecCCCCCHHHHHHHHhhcCCeEEEEccccHHHHhcc----CCCeEEEcccC-cccCCCC--------------c--C
Q 043601 105 IATTANPVYTVSELSKQVKDSSPKLVVTVPELWERVKDF----NIPAVLLGSNH-IVSPRGL--------------R--S 163 (488)
Q Consensus 105 ~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~----~~~~~~~~~~~-~~~~~~~--------------~--~ 163 (488)
+++|++|.++.+.+.++++.+++++++++++..+.+... ....+...... ....... . .
T Consensus 100 ~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (560)
T PRK08974 100 IVVNVNPLYTPRELEHQLNDSGAKAIVIVSNFAHTLEKVVFKTPVKHVILTRMGDQLSTAKGTLVNFVVKYIKRLVPKYH 179 (560)
T ss_pred EEeccCccCCHHHHHHHHHhcCceEEEEeccccHHHHHHhhhcCcceEEEecccccccccccccccchhhhccccccccc
Confidence 999999999999999999999999999987654444322 11111111100 0000000 0 0
Q ss_pred CCCccchHHHHhhcCCCCCCCCCCCCCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHhh-hhhhcCCCCcEEEEecc
Q 043601 164 SSNIVYFDELIELSGNASNFPDVSVKQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTAM-DQELAGALDYVTLCVLP 242 (488)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~ 242 (488)
......+.+....... ..........+++++++|||||||.||+|.++|.++..+...... .........+.++..+|
T Consensus 180 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p 258 (560)
T PRK08974 180 LPDAISFRSALHKGRR-MQYVKPELVPEDLAFLQYTGGTTGVAKGAMLTHRNMLANLEQAKAAYGPLLHPGKELVVTALP 258 (560)
T ss_pred CCCcccHHHHhhccCC-CCCCCCCCCCCCeEEEEECCCCCCCCcEEEEchHHHHHHHHHHHHhhccccCCCccEEEEeCc
Confidence 0111122222221111 112223356789999999999999999999999999875321111 11112344677888999
Q ss_pred hhhHHhHHHHHHHHhhCCceEEEc-CCCCHHHHHHHHHhcCccEEEecHHHHHHHHhcCCccCCCCCCCccEEEEccCCC
Q 043601 243 MFHVFGLSFVVYAQLQKGNCVVSM-RKFDLETALRAIEKYRVTHWWVVPPIILALAKNVSLVKKFDLSSLKGIGSGAAPL 321 (488)
Q Consensus 243 ~~~~~~~~~~~~~~l~~G~~~~~~-~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~v~~~G~~l 321 (488)
++|.+++....+..+..|++.++. +..++..+++.++++++|.+.++|+++..+... ......+++++|.+++||+++
T Consensus 259 ~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~-~~~~~~~~~~lr~~~~gg~~~ 337 (560)
T PRK08974 259 LYHIFALTVNCLLFIELGGQNLLITNPRDIPGFVKELKKYPFTAITGVNTLFNALLNN-EEFQELDFSSLKLSVGGGMAV 337 (560)
T ss_pred HHHHHHHHHHHHHHhhcCCeEEEecCccCHHHHHHHHHhcCcceEcCcHHHHHHHHhC-cCcccCCccceeEEEecCccC
Confidence 999998867677788889887766 356789999999999999999999999999876 444456678999999999999
Q ss_pred cHHHHHHHHhhCCCCeEEeccCcccccccccccCCCCCCCCCCceeecCCCceEEEEeCCCCCCCCCCCcceEEEecC--
Q 043601 322 RKELVEECSKNLPTVTVFQGYGMTETCGVVTVENPLLGVQNSGSTGTLVAGVEAQIVCVDTLKPLPPNQVGELWVRGP-- 399 (488)
Q Consensus 322 ~~~~~~~~~~~~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~-- 399 (488)
++.+.+.|.+.++ ..+++.||+||++..++.+... .....+++|.|++++.++++| +++++++.|+.|||+++|+
T Consensus 338 ~~~~~~~~~~~~g-~~~~~~YG~tE~~~~~~~~~~~-~~~~~~~~G~~~~~~~~~i~~-~~~~~~~~g~~Gel~v~g~~~ 414 (560)
T PRK08974 338 QQAVAERWVKLTG-QYLLEGYGLTECSPLVSVNPYD-LDYYSGSIGLPVPSTEIKLVD-DDGNEVPPGEPGELWVKGPQV 414 (560)
T ss_pred CHHHHHHHHHHhC-CcEEeeecccccCceeeccCCC-CcccCCccccCcCCCEEEEEC-CCCCCCCCCCceEEEEecCCc
Confidence 9999999999886 8999999999998776654332 234467899999999999999 5789999999999999985
Q ss_pred ------------------CccccceEEEccCCcEEEEcccCcceeeCcEEe---eHhHHHhcCCCeeeeEEEeecCCCCC
Q 043601 400 ------------------ILMPGDLGYFDEHGQLFIVDRIKELIKCNGFQV---ELEGVLVSHPEILDAVVIPFPDPEAG 458 (488)
Q Consensus 400 ------------------~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v---~ie~~l~~~~~v~~~~v~~~~~~~~~ 458 (488)
||+|||+++++++|.+++.||.+|+|+++|.++ +||.++.++++|.+++|++.++...+
T Consensus 415 ~~gy~~~~~~~~~~~~~g~~~TGDl~~~~~~g~l~i~GR~~d~i~~~G~~i~~~~IE~~l~~~~~v~~~~v~~~~~~~~g 494 (560)
T PRK08974 415 MLGYWQRPEATDEVIKDGWLATGDIAVMDEEGFLRIVDRKKDMILVSGFNVYPNEIEDVVMLHPKVLEVAAVGVPSEVSG 494 (560)
T ss_pred chhhcCChhhhhhhhhcCCcccCCEEEEcCCceEEEEecccceEEeCCEEECHHHHHHHHHhCCCeeEEEEEeeecCCcc
Confidence 589999999999999999999999999999999 99999999999999999999988888
Q ss_pred ceEEEEEEeCCCCCCCHHHHHHHHHhhcC
Q 043601 459 EVPIAYVVRSPNSSLTKEDVQKFVANDSQ 487 (488)
Q Consensus 459 ~~~~~~v~~~~~~~~~~~~i~~~~~~~l~ 487 (488)
+.++++|+..+ ...+.++++++++++|+
T Consensus 495 ~~~~~~v~~~~-~~~~~~~l~~~l~~~l~ 522 (560)
T PRK08974 495 EAVKIFVVKKD-PSLTEEELITHCRRHLT 522 (560)
T ss_pred eEEEEEEECCC-CCCCHHHHHHHHHhhcc
Confidence 88888877654 34567889999998875
No 96
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional
Probab=100.00 E-value=1.7e-54 Score=438.62 Aligned_cols=431 Identities=22% Similarity=0.299 Sum_probs=357.4
Q ss_pred CCHHHHHhhccccCCCceEEEeCCCCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHHcCCeE
Q 043601 27 LSMVHFLFRNSASYGSKSALIDADSGESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQFPICLLGVIAIGGIA 106 (488)
Q Consensus 27 ~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~ 106 (488)
|++.+.|.++++.+|+++++.+. ++.+||+||.++++++|..|.+.|+++|++|+++++|+.++++++|||+++|+++
T Consensus 2 ~~~~~~l~~~a~~~p~~~~~~~~--~~~~t~~~l~~~~~~~a~~l~~~g~~~~~~v~~~~~~~~~~~~~~~a~~~~G~~~ 79 (503)
T PRK04813 2 MDIIETIEEFAQTQPDFPAYDYL--GEKLTYGQLKEDSDALAAFIDSLKLPDKSPIIVFGHMSPEMLATFLGAVKAGHAY 79 (503)
T ss_pred chHHHHHHHHHHhCCCceEEEeC--CcEEeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEE
Confidence 57889999999999999999887 7899999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCHHHHHHHHhhcCCeEEEEccccHHHHhccCCCeEEEcccCcccCCCCcCCCCccchHHHHhhcC-CCCCCCC
Q 043601 107 TTANPVYTVSELSKQVKDSSPKLVVTVPELWERVKDFNIPAVLLGSNHIVSPRGLRSSSNIVYFDELIELSG-NASNFPD 185 (488)
Q Consensus 107 v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 185 (488)
+|+++.++.+.+..+++..++++++++++.... ......+ ..+++..... .......
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~--------------------~~~~~~~~~~~~~~~~~~ 137 (503)
T PRK04813 80 IPVDVSSPAERIEMIIEVAKPSLIIATEELPLE--ILGIPVI--------------------TLDELKDIFATGNPYDFD 137 (503)
T ss_pred ecCCCCChHHHHHHHHHhcCCCEEEeccccccc--ccCCcEE--------------------ehHHhhhhhhcccccccc
Confidence 999999999999999999999999998765110 0000111 1111111100 0011112
Q ss_pred CCCCCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHhhhhhhcCCCCcEEEEecchhhHHhHHHHHHHHhhCCceEEE
Q 043601 186 VSVKQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTAMDQELAGALDYVTLCVLPMFHVFGLSFVVYAQLQKGNCVVS 265 (488)
Q Consensus 186 ~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~ 265 (488)
....++++++++|||||||.||+|.++|.++..... .....+....+++++...|++|..+. ..++.++..|+++++
T Consensus 138 ~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~~~~~~--~~~~~~~~~~~~~~~~~~p~~~~~~~-~~~~~~l~~g~~~v~ 214 (503)
T PRK04813 138 HAVKGDDNYYIIFTSGTTGKPKGVQISHDNLVSFTN--WMLEDFALPEGPQFLNQAPYSFDLSV-MDLYPTLASGGTLVA 214 (503)
T ss_pred ccCCCCCcEEEEECCCCCCCCcEEEeehHHHHHHHH--HHHHHcCCCcCceeeecCCcchhHhH-HHHHHHHhcCCEEEE
Confidence 345678899999999999999999999999987633 34444667788999999999999887 677889999999998
Q ss_pred cCC---CCHHHHHHHHHhcCccEEEecHHHHHHHHhcCCccCCCCCCCccEEEEccCCCcHHHHHHHHhhCCCCeEEecc
Q 043601 266 MRK---FDLETALRAIEKYRVTHWWVVPPIILALAKNVSLVKKFDLSSLKGIGSGAAPLRKELVEECSKNLPTVTVFQGY 342 (488)
Q Consensus 266 ~~~---~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~i~~~Y 342 (488)
.++ .++..+++.+++++++.+.++|++++.+... ......+++++|.++++|+++++.+.+++.+.|++..+++.|
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~t~~~~~p~~~~~~~~~-~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~~~~~~y 293 (503)
T PRK04813 215 LPKDMTANFKQLFETLPQLPINVWVSTPSFADMCLLD-PSFNEEHLPNLTHFLFCGEELPHKTAKKLLERFPSATIYNTY 293 (503)
T ss_pred cChhhhcCHHHHHHHHHHcCCeEEEeChHHHHHHHHh-hccCcccCCCceEEEEecCcCCHHHHHHHHHHCCCceEEeCc
Confidence 875 5789999999999999999999999887665 334456788999999999999999999999999778999999
Q ss_pred CcccccccccccCCC---CCCCCCCceeecCCCceEEEEeCCCCCCCCCCCcceEEEecC--------------------
Q 043601 343 GMTETCGVVTVENPL---LGVQNSGSTGTLVAGVEAQIVCVDTLKPLPPNQVGELWVRGP-------------------- 399 (488)
Q Consensus 343 G~tE~~~~~~~~~~~---~~~~~~~~~g~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~-------------------- 399 (488)
|+||++..++..... .......++|+|.+++.++|+| +++.+++.|+.|||+++|+
T Consensus 294 G~tE~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d-~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~ 372 (503)
T PRK04813 294 GPTEATVAVTSIEITDEMLDQYKRLPIGYAKPDSPLLIID-EEGTKLPDGEQGEIVISGPSVSKGYLNNPEKTAEAFFTF 372 (503)
T ss_pred ccchheeEEEEEEecccccccCCCCcccccCCCCEEEEEC-CCCCCCCCCCceEEEEeccccccccCCChhHhHHhhccC
Confidence 999997655432211 1124455799999999999999 6889999999999999884
Q ss_pred ----CccccceEEEccCCcEEEEcccCcceeeCcEEe---eHhHHHhcCCCeeeeEEEeecCCCCCceEEEEEEeCCCCC
Q 043601 400 ----ILMPGDLGYFDEHGQLFIVDRIKELIKCNGFQV---ELEGVLVSHPEILDAVVIPFPDPEAGEVPIAYVVRSPNSS 472 (488)
Q Consensus 400 ----~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v---~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~ 472 (488)
||+|||+|++ ++|++++.||.+|+|+.+|.++ +||.++.++|+|.+++|++.++...++.++++|+++++..
T Consensus 373 ~g~~~~~tGD~~~~-~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~ 451 (503)
T PRK04813 373 DGQPAYHTGDAGYL-EDGLLFYQGRIDFQIKLNGYRIELEEIEQNLRQSSYVESAVVVPYNKDHKVQYLIAYVVPKEEDF 451 (503)
T ss_pred CCceeEECCceEEe-eCCeEEEeccccceEEECcEEeCHHHHHHHHHhCCCcceEEEEEeeCCCCccEEEEEEEeccccc
Confidence 7899999999 9999999999999999999999 9999999999999999999877777788999998876421
Q ss_pred C-C---HHHHHHHHHhhcC
Q 043601 473 L-T---KEDVQKFVANDSQ 487 (488)
Q Consensus 473 ~-~---~~~i~~~~~~~l~ 487 (488)
. . .++++++++++|+
T Consensus 452 ~~~~~~~~~l~~~~~~~l~ 470 (503)
T PRK04813 452 EREFELTKAIKKELKERLM 470 (503)
T ss_pred cccchhHHHHHHHHHhhCc
Confidence 1 1 2458888887765
No 97
>PRK07798 acyl-CoA synthetase; Validated
Probab=100.00 E-value=6.1e-54 Score=437.90 Aligned_cols=446 Identities=22% Similarity=0.293 Sum_probs=358.2
Q ss_pred CCHHHHHhhccccCCCceEEEeCCCCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHHcCCeE
Q 043601 27 LSMVHFLFRNSASYGSKSALIDADSGESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQFPICLLGVIAIGGIA 106 (488)
Q Consensus 27 ~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~ 106 (488)
+|+.++|.++++++|+++|+.+. ++.+||+||.++++++|++|.+.|+++|++|+++++|++++++++|||+++|+++
T Consensus 3 ~~l~~~~~~~a~~~p~~~a~~~~--~~~~ty~el~~~~~~la~~L~~~g~~~~~~v~v~~~n~~~~~~~~~a~~~~G~~~ 80 (533)
T PRK07798 3 WNIADLFEAVADAVPDRVALVCG--DRRLTYAELEERANRLAHYLIAQGLGPGDHVGIYARNRIEYVEAMLGAFKARAVP 80 (533)
T ss_pred ccHHHHHHHHHHhCCCceEEEEC--CceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcCeEE
Confidence 68999999999999999999997 7899999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCHHHHHHHHhhcCCeEEEEccccHHHHhccCC-----CeEEEcccCcccCCCCcCCCCccchHHHHhhcCCCC
Q 043601 107 TTANPVYTVSELSKQVKDSSPKLVVTVPELWERVKDFNI-----PAVLLGSNHIVSPRGLRSSSNIVYFDELIELSGNAS 181 (488)
Q Consensus 107 v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (488)
+|+++.++.+++.++++.++++.++++.+....+..... ..++...+ .... ....+..++++++.... .
T Consensus 81 v~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~--~ 154 (533)
T PRK07798 81 VNVNYRYVEDELRYLLDDSDAVALVYEREFAPRVAEVLPRLPKLRTLVVVED-GSGN---DLLPGAVDYEDALAAGS--P 154 (533)
T ss_pred EecCcCCCHHHHHHHHhhcCCCEEEEchhhHHHHHHHhccCCCccEEEEecC-Cccc---ccCCccccHHHHHhccC--C
Confidence 999999999999999999999999999876666544311 11211111 1000 01112345666654332 1
Q ss_pred CCCCCCCCCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHhh-h------hhhc------CCCCcEEEEecchhhHHh
Q 043601 182 NFPDVSVKQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTAM-D------QELA------GALDYVTLCVLPMFHVFG 248 (488)
Q Consensus 182 ~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~-~------~~~~------~~~~~~~~~~~~~~~~~~ 248 (488)
...... ...+.++|+|||||||.||+|+++|.++......... . .... ...+++++..+|++|..+
T Consensus 155 ~~~~~~-~~~~~~~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~~ 233 (533)
T PRK07798 155 ERDFGE-RSPDDLYLLYTGGTTGMPKGVMWRQEDIFRVLLGGRDFATGEPIEDEEELAKRAAAGPGMRRFPAPPLMHGAG 233 (533)
T ss_pred cCCCCC-CCCCceEEEECCCCCCCCcEEEEecHHHHHHHhhhhhhhcccchhhhhhhcccccCCCCceEEEecchhhhhh
Confidence 111112 2334579999999999999999999998764221100 0 0111 146688999999999999
Q ss_pred HHHHHHHHhhCCceEEEcC--CCCHHHHHHHHHhcCccEEEecHHHHHH-HHhcCCccCCCCCCCccEEEEccCCCcHHH
Q 043601 249 LSFVVYAQLQKGNCVVSMR--KFDLETALRAIEKYRVTHWWVVPPIILA-LAKNVSLVKKFDLSSLKGIGSGAAPLRKEL 325 (488)
Q Consensus 249 ~~~~~~~~l~~G~~~~~~~--~~~~~~~~~~l~~~~~t~l~~~p~~~~~-l~~~~~~~~~~~l~~lr~v~~~G~~l~~~~ 325 (488)
+ ..++.++..|+++++.+ .+++..+++.++++++|.+.++|..+.. +...+......+++++|.+++||+++++++
T Consensus 234 ~-~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~i~~gG~~~~~~~ 312 (533)
T PRK07798 234 Q-WAAFAALFSGQTVVLLPDVRFDADEVWRTIEREKVNVITIVGDAMARPLLDALEARGPYDLSSLFAIASGGALFSPSV 312 (533)
T ss_pred H-HHHHHHHhcCceEEEecCCCcCHHHHHHHHHHhCCeEEEechHHHHHHHHHHhcccccCCCCceEEEEECCCCCCHHH
Confidence 9 57889999999999998 7899999999999999999999876643 433322133457889999999999999999
Q ss_pred HHHHHhhCCCCeEEeccCcccccccccccCCCCCCCCCCcee--ecCCCceEEEEeCCCCCCCCCCCc--ceEEEec---
Q 043601 326 VEECSKNLPTVTVFQGYGMTETCGVVTVENPLLGVQNSGSTG--TLVAGVEAQIVCVDTLKPLPPNQV--GELWVRG--- 398 (488)
Q Consensus 326 ~~~~~~~~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~g--~~~~~~~~~i~d~~~~~~~~~g~~--Gel~v~g--- 398 (488)
.++|.+.+++..+++.||+||++......... .....| .+.++..++++| +++++++.|+. |+++..+
T Consensus 313 ~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~----~~~~~g~~~~~~~~~~~i~~-~~~~~~~~g~~~~g~l~~~~~~~ 387 (533)
T PRK07798 313 KEALLELLPNVVLTDSIGSSETGFGGSGTVAK----GAVHTGGPRFTIGPRTVVLD-EDGNPVEPGSGEIGWIARRGHIP 387 (533)
T ss_pred HHHHHHHcCCCeEEeeecccccccccccCCCC----CCccCCCCccCCCceEEEEC-CCCCCCCCCCCCeeEEEeecCcc
Confidence 99999999778999999999997554433211 112233 788899999999 57778998887 7877654
Q ss_pred --------------------CCccccceEEEccCCcEEEEcccCcceeeCcEEe---eHhHHHhcCCCeeeeEEEeecCC
Q 043601 399 --------------------PILMPGDLGYFDEHGQLFIVDRIKELIKCNGFQV---ELEGVLVSHPEILDAVVIPFPDP 455 (488)
Q Consensus 399 --------------------~~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v---~ie~~l~~~~~v~~~~v~~~~~~ 455 (488)
.|+.|||+++++++|++++.||.+|+++.+|.+| +||.++.+++.|.+++|++.++.
T Consensus 388 ~gy~~~~~~t~~~f~~~~~~~~~~TGD~~~~~~~g~l~~~GR~~~~i~~~G~~v~~~eIE~~l~~~~~v~~~~v~~~~~~ 467 (533)
T PRK07798 388 LGYYKDPEKTAETFPTIDGVRYAIPGDRARVEADGTITLLGRGSVCINTGGEKVFPEEVEEALKAHPDVADALVVGVPDE 467 (533)
T ss_pred ccccCChhhhHHhhccCCCCceEEcCcEEEEcCCCcEEEEccccceEecCCEEeCHHHHHHHHHhCccceeEEEEeccCc
Confidence 2778999999999999999999999999999999 99999999999999999999888
Q ss_pred CCCceEEEEEEeCCCCCCCHHHHHHHHHhhcC
Q 043601 456 EAGEVPIAYVVRSPNSSLTKEDVQKFVANDSQ 487 (488)
Q Consensus 456 ~~~~~~~~~v~~~~~~~~~~~~i~~~~~~~l~ 487 (488)
..++.+.++|+++++...+.++++++++++|+
T Consensus 468 ~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~ 499 (533)
T PRK07798 468 RWGQEVVAVVQLREGARPDLAELRAHCRSSLA 499 (533)
T ss_pred ccCceEEEEEEECCCCCCCHHHHHHHHhhhcc
Confidence 88889999999988777889999999999875
No 98
>PRK12582 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=3.3e-55 Score=452.82 Aligned_cols=438 Identities=22% Similarity=0.273 Sum_probs=331.8
Q ss_pred CCCHHHHHhhccccCCCceEEEeCCC--C--cceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHH
Q 043601 26 NLSMVHFLFRNSASYGSKSALIDADS--G--ESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQFPICLLGVIA 101 (488)
Q Consensus 26 ~~~l~~~l~~~a~~~p~~~a~~~~~~--~--~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~ 101 (488)
+.|+.++|.++++.+|+++|+++.+. + +.+||+||.++++++|++|.+.|+++||+|+++++|+++|++++|||++
T Consensus 48 ~~~l~~~l~~~a~~~pd~~a~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~ 127 (624)
T PRK12582 48 PRSIPHLLAKWAAEAPDRPWLAQREPGHGQWRKVTYGEAKRAVDALAQALLDLGLDPGRPVMILSGNSIEHALMTLAAMQ 127 (624)
T ss_pred ccCHHHHHHHHHHHCCCchheecccCCCCceEEeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHHHHHHHHHH
Confidence 57899999999999999999987431 1 6899999999999999999999999999999999999999999999999
Q ss_pred cCCeEeecCCCCCH-----HHHHHHHhhcCCeEEEEcccc-HHH-Hhc---cCCCeEEEcccCcccCCCCcCCCCccchH
Q 043601 102 IGGIATTANPVYTV-----SELSKQVKDSSPKLVVTVPEL-WER-VKD---FNIPAVLLGSNHIVSPRGLRSSSNIVYFD 171 (488)
Q Consensus 102 ~G~~~v~l~~~~~~-----~~l~~~l~~~~~~~vi~~~~~-~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (488)
+|++++|++|.++. +++.++++.++++++|+++.. ... +.. .....+.+... ........++
T Consensus 128 ~G~v~vpl~p~~~~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~i~~~~~--------~~~~~~~~~~ 199 (624)
T PRK12582 128 AGVPAAPVSPAYSLMSHDHAKLKHLFDLVKPRVVFAQSGAPFARALAALDLLDVTVVHVTGP--------GEGIASIAFA 199 (624)
T ss_pred cCCeEeeccCccccccCCHHHHHHHHHhcCCcEEEecCHHHHHHHHHhhhhcCceEEEEcCC--------CcccccccHH
Confidence 99999999999885 899999999999999998642 111 111 11222222111 0011223455
Q ss_pred HHHhhcCCCC-CCCCCCCCCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHhhhhhhcCC---CCcEEEEecchhhHH
Q 043601 172 ELIELSGNAS-NFPDVSVKQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTAMDQELAGA---LDYVTLCVLPMFHVF 247 (488)
Q Consensus 172 ~~~~~~~~~~-~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~ 247 (488)
++........ ........++++++|+|||||||.||+|++||.++...... ........ ..++.+..+|++|.+
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~th~~l~~~~~~--~~~~~~~~~~~~~~~~l~~lPl~h~~ 277 (624)
T PRK12582 200 DLAATPPTAAVAAAIAAITPDTVAKYLFTSGSTGMPKAVINTQRMMCANIAM--QEQLRPREPDPPPPVSLDWMPWNHTM 277 (624)
T ss_pred HHhhcCCcchhhhhhccCCCCceEEEEEcCCCCCCCceEEeeHHHHHHHHHH--HHHhccccCCCCCceEEEechHHHHH
Confidence 5443221100 01112346789999999999999999999999999876332 22222222 257899999999999
Q ss_pred hHHHHHHHHhhCCceEEEcCC-CC---HHHHHHHHHhcCccEEEecHHHHHHHHhcCCcc---CCCCCCCccEEEEccCC
Q 043601 248 GLSFVVYAQLQKGNCVVSMRK-FD---LETALRAIEKYRVTHWWVVPPIILALAKNVSLV---KKFDLSSLKGIGSGAAP 320 (488)
Q Consensus 248 ~~~~~~~~~l~~G~~~~~~~~-~~---~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~---~~~~l~~lr~v~~~G~~ 320 (488)
++...++.++..|+++++.++ ++ ...+++.++++++|+++++|+.+..+++.+... ....+++||.+++||++
T Consensus 278 g~~~~~~~~l~~G~tvvl~~~~~~~~~~~~~~~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~~~~~slr~i~~gGa~ 357 (624)
T PRK12582 278 GGNANFNGLLWGGGTLYIDDGKPLPGMFEETIRNLREISPTVYGNVPAGYAMLAEAMEKDDALRRSFFKNLRLMAYGGAT 357 (624)
T ss_pred hHHHHHHHHHhCceEEEEcCCCcccchHHHHHHHHHhcCCeEEeccCHHHHHHHHHHhhCHHHHHHHhhheeEEEecCCC
Confidence 987777888999999998753 33 345678889999999999999999887642211 12347899999999999
Q ss_pred CcHHHHHHHHhhC----C-CCeEEeccCcccccccccccCCCCCCCCCCceeecCCCceEEEEeCCCCCCCCCCCcceEE
Q 043601 321 LRKELVEECSKNL----P-TVTVFQGYGMTETCGVVTVENPLLGVQNSGSTGTLVAGVEAQIVCVDTLKPLPPNQVGELW 395 (488)
Q Consensus 321 l~~~~~~~~~~~~----~-~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d~~~~~~~~~g~~Gel~ 395 (488)
+++++.+.|.+.+ + ++.+++.||+||++.++...... ....+++|+|+|++++++++ .|+.|||+
T Consensus 358 l~~~~~~~~~~~~~~~~g~~~~l~~~YG~TE~~~~~~~~~~~--~~~~~svG~p~pg~~v~i~~--------~G~~GEl~ 427 (624)
T PRK12582 358 LSDDLYERMQALAVRTTGHRIPFYTGYGATETAPTTTGTHWD--TERVGLIGLPLPGVELKLAP--------VGDKYEVR 427 (624)
T ss_pred CCHHHHHHHHHHHHhhcCCCceEEeccccccccceeecccCC--CCCCCCCCcCCCCcEEEEcc--------CCCceEEE
Confidence 9999999998863 2 36899999999998765532222 34567899999999999864 47789999
Q ss_pred EecC---------------------CccccceEEE-c---cCCcEEEEcccCcceee-CcEEe---eH--hHHHhcCCCe
Q 043601 396 VRGP---------------------ILMPGDLGYF-D---EHGQLFIVDRIKELIKC-NGFQV---EL--EGVLVSHPEI 444 (488)
Q Consensus 396 v~g~---------------------~~~tGD~~~~-~---~~g~l~~~GR~~d~i~~-~G~~v---~i--e~~l~~~~~v 444 (488)
|+|+ ||+|||+|++ | ++|++++.||+||+|+. +|++| +| |.++.+||.|
T Consensus 428 vrg~~v~~GY~~~p~~t~~~f~~dgw~~TGDlg~~~d~~~~~g~l~i~GR~~d~i~~~~G~~i~p~~iE~e~~l~~~p~V 507 (624)
T PRK12582 428 VKGPNVTPGYHKDPELTAAAFDEEGFYRLGDAARFVDPDDPEKGLIFDGRVAEDFKLSTGTWVSVGTLRPDAVAACSPVI 507 (624)
T ss_pred EECCcccccccCCccchhhhcCccCCccccceEEecCCcCCCCceEEeccchhhEecCCCcEechHHHHHHHHHhcCcch
Confidence 9985 6889999998 4 46899999999999997 79998 55 5788999999
Q ss_pred eeeEEEeecCCCCCceEEEEEEeCC----------CC----CCCHHHHHHHHHhhcC
Q 043601 445 LDAVVIPFPDPEAGEVPIAYVVRSP----------NS----SLTKEDVQKFVANDSQ 487 (488)
Q Consensus 445 ~~~~v~~~~~~~~~~~~~~~v~~~~----------~~----~~~~~~i~~~~~~~l~ 487 (488)
.+++|++.+++. +.++|++.. +. ..+.++++++++++|.
T Consensus 508 ~~a~VvG~~~~~----~g~lv~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~ 560 (624)
T PRK12582 508 HDAVVAGQDRAF----IGLLAWPNPAACRQLAGDPDAAPEDVVKHPAVLAILREGLS 560 (624)
T ss_pred heEEEEcCCCCc----EEEEEecCHHHHHHHHhcCCCCHHHHhcCHHHHHHHHHHHH
Confidence 999999987764 444444321 10 1134567777776653
No 99
>PLN02479 acetate-CoA ligase
Probab=100.00 E-value=5.2e-54 Score=439.85 Aligned_cols=453 Identities=23% Similarity=0.342 Sum_probs=352.7
Q ss_pred CCCHHHHHhhccccCCCceEEEeCCCCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHHcCCe
Q 043601 26 NLSMVHFLFRNSASYGSKSALIDADSGESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQFPICLLGVIAIGGI 105 (488)
Q Consensus 26 ~~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~ 105 (488)
.+|+..++.+.++.+|+++|+.+. +..+||+||.++++++|.+|.+.|+++||+|+++++|++++++++|||+++|++
T Consensus 19 ~~~~~~~~~~~~~~~p~~~a~~~~--~~~~ty~eL~~~~~~lA~~L~~~g~~~gd~V~i~~~n~~~~~~~~la~~~~G~v 96 (567)
T PLN02479 19 ALTPLWFLERAAVVHPTRKSVVHG--SVRYTWAQTYQRCRRLASALAKRSIGPGSTVAVIAPNIPAMYEAHFGVPMAGAV 96 (567)
T ss_pred ccCHHHHHHHHHhhCCCceEEEEC--CceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHhCCcE
Confidence 367889999999999999999886 678999999999999999999999999999999999999999999999999999
Q ss_pred EeecCCCCCHHHHHHHHhhcCCeEEEEccccHHHHhcc------------CCCeEEEcccCcccCCC--CcCCCCccchH
Q 043601 106 ATTANPVYTVSELSKQVKDSSPKLVVTVPELWERVKDF------------NIPAVLLGSNHIVSPRG--LRSSSNIVYFD 171 (488)
Q Consensus 106 ~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 171 (488)
++|+++.++.+++.++++.++++.+|++++..+..... ..+.++...+....... .....+...++
T Consensus 97 ~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (567)
T PLN02479 97 VNCVNIRLNAPTIAFLLEHSKSEVVMVDQEFFTLAEEALKILAEKKKSSFKPPLLIVIGDPTCDPKSLQYALGKGAIEYE 176 (567)
T ss_pred EEEeccccCHHHHHHHHhhcCceEEEEchhhhhHHHHHHHHHhhcccccCCCceEEEecCCcCCccccccccccCcccHH
Confidence 99999999999999999999999999998765443221 11112221111100000 00112333456
Q ss_pred HHHhhcCCCCCCCCCCCCCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHhhhhhhcCCCCcEEEEecchhhHHhHHH
Q 043601 172 ELIELSGNASNFPDVSVKQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTAMDQELAGALDYVTLCVLPMFHVFGLSF 251 (488)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (488)
+++..... ..........++.++++|||||||.||+|++||.++...+.. ....+....++++++.+|++|..++..
T Consensus 177 ~~~~~~~~-~~~~~~~~~~~~~~~i~yTSGTTG~PKgV~~sh~~~~~~~~~--~~~~~~~~~~~~~~~~~p~~h~~~~~~ 253 (567)
T PLN02479 177 KFLETGDP-EFAWKPPADEWQSIALGYTSGTTASPKGVVLHHRGAYLMALS--NALIWGMNEGAVYLWTLPMFHCNGWCF 253 (567)
T ss_pred HHHhcccc-ccccCCCCCcccceEEEECCCCCCCCcEEEeccHHHHHHHHH--HHhhcCCCCCCEEEEecchhhhhhHHH
Confidence 55543221 111111223456788999999999999999999998765322 233445678899999999999998755
Q ss_pred HHHHHhhCCceEEEcCCCCHHHHHHHHHhcCccEEEecHHHHHHHHhcCCccCC-CCCCCccEEEEccCCCcHHHHHHHH
Q 043601 252 VVYAQLQKGNCVVSMRKFDLETALRAIEKYRVTHWWVVPPIILALAKNVSLVKK-FDLSSLKGIGSGAAPLRKELVEECS 330 (488)
Q Consensus 252 ~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~-~~l~~lr~v~~~G~~l~~~~~~~~~ 330 (488)
.+...+..|.+++ ...+++..+++.++++++|+++++|+++..+.+. ..... .++++++.++++|+++++.+.++|.
T Consensus 254 ~~~~~~~~g~~~~-~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~-~~~~~~~~~~~l~~~~~~G~~~~~~~~~~~~ 331 (567)
T PLN02479 254 TWTLAALCGTNIC-LRQVTAKAIYSAIANYGVTHFCAAPVVLNTIVNA-PKSETILPLPRVVHVMTAGAAPPPSVLFAMS 331 (567)
T ss_pred HHHHHhhcCceEe-ccCCCHHHHHHHHHHcCCeEEEecHHHHHHHHhh-hhhcccccccceeEEEEcCCCCCHHHHHHHH
Confidence 4445566666654 4568999999999999999999999999999876 32222 3678999999999999999999998
Q ss_pred hhCCCCeEEeccCcccccccccccCC---------CCCCCCCCceeecCCCce-EEEEeCCCCCCCCCC--CcceEEEec
Q 043601 331 KNLPTVTVFQGYGMTETCGVVTVENP---------LLGVQNSGSTGTLVAGVE-AQIVCVDTLKPLPPN--QVGELWVRG 398 (488)
Q Consensus 331 ~~~~~~~i~~~YG~tE~~~~~~~~~~---------~~~~~~~~~~g~~~~~~~-~~i~d~~~~~~~~~g--~~Gel~v~g 398 (488)
+. +.++++.||+||+++.+..... ........+.|.+.+++. ++++|++++++++.+ +.|||+++|
T Consensus 332 ~~--~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~i~d~~~~~~~~~~g~~~GEl~v~g 409 (567)
T PLN02479 332 EK--GFRVTHTYGLSETYGPSTVCAWKPEWDSLPPEEQARLNARQGVRYIGLEGLDVVDTKTMKPVPADGKTMGEIVMRG 409 (567)
T ss_pred hc--CCceecccccccccccccceeccccccccCcccccccccccCCCcCCcCceeEEcCCCCcccCCCCCCceEEEEec
Confidence 76 4899999999998654332210 000011235677888875 788887678888754 579999998
Q ss_pred C--------------------CccccceEEEccCCcEEEEcccCcceeeCcEEe---eHhHHHhcCCCeeeeEEEeecCC
Q 043601 399 P--------------------ILMPGDLGYFDEHGQLFIVDRIKELIKCNGFQV---ELEGVLVSHPEILDAVVIPFPDP 455 (488)
Q Consensus 399 ~--------------------~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v---~ie~~l~~~~~v~~~~v~~~~~~ 455 (488)
+ |++|||+++++++|.+++.||.+|+|+.+|.+| +||.++.++|.|.+++|++.++.
T Consensus 410 ~~~~~GY~~~~~~t~~~~~~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~eIE~~l~~~~~v~~~~v~~~~~~ 489 (567)
T PLN02479 410 NMVMKGYLKNPKANEEAFANGWFHSGDLGVKHPDGYIEIKDRSKDIIISGGENISSLEVENVVYTHPAVLEASVVARPDE 489 (567)
T ss_pred cchhhhhhcCcccccchhcCCceecceeEEEcCCccEEEeccccceEEeCCEEEcHHHHHHHHHhCcccceeeEEeccch
Confidence 4 689999999999999999999999999999999 99999999999999999999888
Q ss_pred CCCceEEEEEEeCCCCC-----CCHHHHHHHHHhhcC
Q 043601 456 EAGEVPIAYVVRSPNSS-----LTKEDVQKFVANDSQ 487 (488)
Q Consensus 456 ~~~~~~~~~v~~~~~~~-----~~~~~i~~~~~~~l~ 487 (488)
..++.++++|++.++.. ...++++++++++|+
T Consensus 490 ~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~ 526 (567)
T PLN02479 490 RWGESPCAFVTLKPGVDKSDEAALAEDIMKFCRERLP 526 (567)
T ss_pred hcCceeEEEEEecCcccccchhhhHHHHHHHHHhhcc
Confidence 78889999999876542 345788999998876
No 100
>PRK05691 peptide synthase; Validated
Probab=100.00 E-value=1.1e-54 Score=521.76 Aligned_cols=432 Identities=24% Similarity=0.328 Sum_probs=367.9
Q ss_pred CCCHHHHHhhccccCCCceEEEeCCCCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHHcCCe
Q 043601 26 NLSMVHFLFRNSASYGSKSALIDADSGESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQFPICLLGVIAIGGI 105 (488)
Q Consensus 26 ~~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~ 105 (488)
..++.++|.++++.+|+++|+++. +..+||+||.++++++|++|+++|+++|++|+++++|++++++++||++++|++
T Consensus 1130 ~~~l~~~~~~~a~~~p~~~Al~~~--~~~lTY~eL~~~~~~lA~~L~~~gv~~g~~V~i~~~~s~~~iv~~lailkaG~~ 1207 (4334)
T PRK05691 1130 QAWLPELLNEQARQTPERIALVWD--GGSLDYAELHAQANRLAHYLRDKGVGPDVCVAIAAERSPQLLVGLLAILKAGGA 1207 (4334)
T ss_pred cCCHHHHHHHHHHhCCCCeEEEEC--CceEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCE
Confidence 468999999999999999999987 679999999999999999999999999999999999999999999999999999
Q ss_pred EeecCCCCCHHHHHHHHhhcCCeEEEEccccHHHHhccCC-CeEEEcccCcccCCCCcCCCCccchHHHHhhcCCCCCCC
Q 043601 106 ATTANPVYTVSELSKQVKDSSPKLVVTVPELWERVKDFNI-PAVLLGSNHIVSPRGLRSSSNIVYFDELIELSGNASNFP 184 (488)
Q Consensus 106 ~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (488)
++|++|.++.+++.++++.++++++|++.+....+..... ..+..... .... .. ...+
T Consensus 1208 ~vpld~~~p~~rl~~il~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~----~~--~~~~ 1266 (4334)
T PRK05691 1208 YVPLDPDYPAERLAYMLADSGVELLLTQSHLLERLPQAEGVSAIALDSL---------------HLDS----WP--SQAP 1266 (4334)
T ss_pred EEecCcCChHHHHHHHHHhcCCCEEEecchhhhhcccccCceEEeeccc---------------cccc----cC--CCCC
Confidence 9999999999999999999999999999876554433211 11111100 0000 00 1112
Q ss_pred CCCCCCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHhhhhhhcCCCCcEEEEecchhhHHhHHHHHHHHhhCCceEE
Q 043601 185 DVSVKQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTAMDQELAGALDYVTLCVLPMFHVFGLSFVVYAQLQKGNCVV 264 (488)
Q Consensus 185 ~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~ 264 (488)
.....++++++++|||||||.||||+++|+++.+. .......+...++++++...|++|..++ ..++.++..|++++
T Consensus 1267 ~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~--~~~~~~~~~~~~~d~~l~~~~~~fd~s~-~~~~~~L~~G~~l~ 1343 (4334)
T PRK05691 1267 GLHLHGDNLAYVIYTSGSTGQPKGVGNTHAALAER--LQWMQATYALDDSDVLMQKAPISFDVSV-WECFWPLITGCRLV 1343 (4334)
T ss_pred CCCCCCCCeEEEEEcCCCCCCCceeEeecHHHHHH--HHHHHHhcCCCCCCEEEEeCCccHHHHH-HHHHHHHhCCCEEE
Confidence 22346789999999999999999999999999877 3445556678899999999999998887 78889999999999
Q ss_pred EcCC---CCHHHHHHHHHhcCccEEEecHHHHHHHHhcCCccCCCCCCCccEEEEccCCCcHHHHHHHHhhCCCCeEEec
Q 043601 265 SMRK---FDLETALRAIEKYRVTHWWVVPPIILALAKNVSLVKKFDLSSLKGIGSGAAPLRKELVEECSKNLPTVTVFQG 341 (488)
Q Consensus 265 ~~~~---~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~i~~~ 341 (488)
+.+. .++..+++.++++++|++.++|+++..+... . ....+++||.+++|||++++++.+.|.+.++++++++.
T Consensus 1344 i~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~l~~l~~~-~--~~~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~ 1420 (4334)
T PRK05691 1344 LAGPGEHRDPQRIAELVQQYGVTTLHFVPPLLQLFIDE-P--LAAACTSLRRLFSGGEALPAELRNRVLQRLPQVQLHNR 1420 (4334)
T ss_pred EcCccccCCHHHHHHHHHHcCCeEEECcHHHHHHHHhC-c--ccccCCcccEEEEeecCCCHHHHHHHHHhCCCcEEEeC
Confidence 9853 6899999999999999999999999999864 2 23467899999999999999999999999988999999
Q ss_pred cCcccccccccccCCCCCCCCCCceeecCCCceEEEEeCCCCCCCCCCCcceEEEecC----------------------
Q 043601 342 YGMTETCGVVTVENPLLGVQNSGSTGTLVAGVEAQIVCVDTLKPLPPNQVGELWVRGP---------------------- 399 (488)
Q Consensus 342 YG~tE~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~---------------------- 399 (488)
||+||++..++............++|+|++++.++|+| +++++++.|..|||+|+|+
T Consensus 1421 YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d-~~~~~vp~G~~GEL~i~G~~v~~GYl~~p~~t~~~f~~~p~ 1499 (4334)
T PRK05691 1421 YGPTETAINVTHWQCQAEDGERSPIGRPLGNVLCRVLD-AELNLLPPGVAGELCIGGAGLARGYLGRPALTAERFVPDPL 1499 (4334)
T ss_pred CCcChheeeeeeeecccccCCCCcccceeCCCEEEEEC-CCCCCCCCCCceEEEecCcccchhhcCCccccHhhCCCCCC
Confidence 99999987655432222234556899999999999999 6799999999999999874
Q ss_pred ------CccccceEEEccCCcEEEEcccCcceeeCcEEe---eHhHHHhcCCCeeeeEEEeecCCCCCceEEEEEEeCCC
Q 043601 400 ------ILMPGDLGYFDEHGQLFIVDRIKELIKCNGFQV---ELEGVLVSHPEILDAVVIPFPDPEAGEVPIAYVVRSPN 470 (488)
Q Consensus 400 ------~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v---~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~ 470 (488)
||+|||+|++++||.++++||+|++||++|++| +||.++.++|+|.+++|+..... .++.++++++..++
T Consensus 1500 ~~~~~r~yrTGDl~~~~~dG~l~~~GR~d~qiki~G~rie~~eIE~~l~~~~~V~~a~v~~~~~~-~~~~lva~~~~~~~ 1578 (4334)
T PRK05691 1500 GEDGARLYRTGDRARWNADGALEYLGRLDQQVKLRGFRVEPEEIQARLLAQPGVAQAAVLVREGA-AGAQLVGYYTGEAG 1578 (4334)
T ss_pred CCCCceEEEccceEEECCCCCEEEecccCcEEEECCEEcCHHHHHHHHHhCCCcceEEEEEeeCC-CCCEEEEEEEeCCC
Confidence 688999999999999999999999999999999 99999999999999999976554 45789999998877
Q ss_pred CCCCHHHHHHHHHhhcCC
Q 043601 471 SSLTKEDVQKFVANDSQL 488 (488)
Q Consensus 471 ~~~~~~~i~~~~~~~l~~ 488 (488)
...+.++++++++++|+.
T Consensus 1579 ~~~~~~~l~~~l~~~Lp~ 1596 (4334)
T PRK05691 1579 QEAEAERLKAALAAELPE 1596 (4334)
T ss_pred CCCCHHHHHHHHHHhCcc
Confidence 777888999999999873
No 101
>PRK08162 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.3e-53 Score=434.05 Aligned_cols=451 Identities=24% Similarity=0.331 Sum_probs=354.0
Q ss_pred CCCHHHHHhhccccCCCceEEEeCCCCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHHcCCe
Q 043601 26 NLSMVHFLFRNSASYGSKSALIDADSGESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQFPICLLGVIAIGGI 105 (488)
Q Consensus 26 ~~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~ 105 (488)
+++..++|.+.++.+|+++|+.+. +..+||+||.++++++|.+|.+.|+++|++|+++++|++++++++|||+++|++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~a~~~~--~~~~ty~~L~~~~~~~a~~L~~~g~~~g~~v~i~~~~~~~~~~~~lA~~~~G~~ 94 (545)
T PRK08162 17 PLTPLSFLERAAEVYPDRPAVIHG--DRRRTWAETYARCRRLASALARRGIGRGDTVAVLLPNIPAMVEAHFGVPMAGAV 94 (545)
T ss_pred cCCHHHHHHHHHHHCCCCeEEEEC--CeEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHHHHHHHHHHhCcE
Confidence 378889999999999999999887 689999999999999999999999999999999999999999999999999999
Q ss_pred EeecCCCCCHHHHHHHHhhcCCeEEEEccccHHHHhcc----CC-CeEEEcccCcccCCCCcCCCCccchHHHHhhcCCC
Q 043601 106 ATTANPVYTVSELSKQVKDSSPKLVVTVPELWERVKDF----NI-PAVLLGSNHIVSPRGLRSSSNIVYFDELIELSGNA 180 (488)
Q Consensus 106 ~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (488)
++|+++.++.+++..+++.++++.++++.+....+... .. ..+.+......... .......+++++.....
T Consensus 95 ~vpl~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-- 170 (545)
T PRK08162 95 LNTLNTRLDAASIAFMLRHGEAKVLIVDTEFAEVAREALALLPGPKPLVIDVDDPEYPG--GRFIGALDYEAFLASGD-- 170 (545)
T ss_pred EeccccccChHHHHHHHHhCCCeEEEEccchhhHHHHHHhhCCCCceEEEecCcccccc--CCCcccccHHHHhccCC--
Confidence 99999999999999999999999999998876655432 11 12222211110000 01112234555543321
Q ss_pred CCCC-CCCCCCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHhhhhhhcCCCCcEEEEecchhhHHhHHHHHHHHhhC
Q 043601 181 SNFP-DVSVKQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTAMDQELAGALDYVTLCVLPMFHVFGLSFVVYAQLQK 259 (488)
Q Consensus 181 ~~~~-~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 259 (488)
+... ....+.+++++++|||||||.||+|+++|.++...+.. .........+++.++.+|++|..++...++..+ .
T Consensus 171 ~~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~t~~~~~~~~~~--~~~~~~~~~~~~~l~~~pl~h~~~~~~~~~~~~-~ 247 (545)
T PRK08162 171 PDFAWTLPADEWDAIALNYTSGTTGNPKGVVYHHRGAYLNALS--NILAWGMPKHPVYLWTLPMFHCNGWCFPWTVAA-R 247 (545)
T ss_pred ccccccCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHH--HHHhcCCCCCCeeEeccCcHhhhhHHHHHHHHH-H
Confidence 1111 11234568899999999999999999999987665322 233344667789999999999988854444444 4
Q ss_pred CceEEEcCCCCHHHHHHHHHhcCccEEEecHHHHHHHHhcCCccCCCCCCCccEEEEccCCCcHHHHHHHHhhCCCCeEE
Q 043601 260 GNCVVSMRKFDLETALRAIEKYRVTHWWVVPPIILALAKNVSLVKKFDLSSLKGIGSGAAPLRKELVEECSKNLPTVTVF 339 (488)
Q Consensus 260 G~~~~~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~i~ 339 (488)
|++.+....+++..+++.++++++|++.++|+++..|++. .......+.+++.++++|+.+++.+.+.+.+. +++++
T Consensus 248 ~g~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~--~~~~~ 324 (545)
T PRK08162 248 AGTNVCLRKVDPKLIFDLIREHGVTHYCGAPIVLSALINA-PAEWRAGIDHPVHAMVAGAAPPAAVIAKMEEI--GFDLT 324 (545)
T ss_pred ccEEEEeCCCCHHHHHHHHHHcCCeEEEechHHHHHHHhC-ccccccCCccceEEEECCCCCCHHHHHHHHHh--CCcee
Confidence 5555555678999999999999999999999999999876 33333345567778899999999999999875 48999
Q ss_pred eccCcccccccccccCCCC---------CCCCCCceeecCC-CceEEEEeCCCCCCCCC-C-CcceEEEecC--------
Q 043601 340 QGYGMTETCGVVTVENPLL---------GVQNSGSTGTLVA-GVEAQIVCVDTLKPLPP-N-QVGELWVRGP-------- 399 (488)
Q Consensus 340 ~~YG~tE~~~~~~~~~~~~---------~~~~~~~~g~~~~-~~~~~i~d~~~~~~~~~-g-~~Gel~v~g~-------- 399 (488)
+.||+||+++.+..+.... ......+.|.+.+ ...++++|++++++++. | ..|||+++|+
T Consensus 325 ~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~g~~~Gel~v~g~~~~~gY~~ 404 (545)
T PRK08162 325 HVYGLTETYGPATVCAWQPEWDALPLDERAQLKARQGVRYPLQEGVTVLDPDTMQPVPADGETIGEIMFRGNIVMKGYLK 404 (545)
T ss_pred ecccccccCcceeecccccccccCCccchhhccCCCCcccCCcceEEEEcCCCCcccCCCCCceeEEEEecCcchhhhcC
Confidence 9999999865444332110 0111234566655 33578888778888876 3 4699999984
Q ss_pred ------------CccccceEEEccCCcEEEEcccCcceeeCcEEe---eHhHHHhcCCCeeeeEEEeecCCCCCceEEEE
Q 043601 400 ------------ILMPGDLGYFDEHGQLFIVDRIKELIKCNGFQV---ELEGVLVSHPEILDAVVIPFPDPEAGEVPIAY 464 (488)
Q Consensus 400 ------------~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v---~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~ 464 (488)
|++|||+|++++||.+++.||.+|++|++|.+| +||.++.++|+|.+++|++.+++..++.++++
T Consensus 405 ~~~~~~~~~~~g~~~TGDl~~~d~dg~l~~~GR~~~~i~~~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~~~~~~~~~~~ 484 (545)
T PRK08162 405 NPKATEEAFAGGWFHTGDLAVLHPDGYIKIKDRSKDIIISGGENISSIEVEDVLYRHPAVLVAAVVAKPDPKWGEVPCAF 484 (545)
T ss_pred ChhhhHHHhhCCCcccCceEEEcCCccEEEEecccceEEeCCEEECHHHHHHHHHhCCcccEEEEEeeeccccCceEEEE
Confidence 688999999999999999999999999999999 99999999999999999999888888899999
Q ss_pred EEeCCCCCCCHHHHHHHHHhhcCC
Q 043601 465 VVRSPNSSLTKEDVQKFVANDSQL 488 (488)
Q Consensus 465 v~~~~~~~~~~~~i~~~~~~~l~~ 488 (488)
|+++++...+.++++++++++|++
T Consensus 485 v~~~~~~~~~~~~l~~~~~~~l~~ 508 (545)
T PRK08162 485 VELKDGASATEEEIIAHCREHLAG 508 (545)
T ss_pred EEeCCCCCCCHHHHHHHHHHhccc
Confidence 999887777889999999998763
No 102
>PRK13391 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.8e-53 Score=431.18 Aligned_cols=437 Identities=26% Similarity=0.352 Sum_probs=351.8
Q ss_pred hhccccCCCceEEEeCCCCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHHcCCeEeecCCCC
Q 043601 34 FRNSASYGSKSALIDADSGESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQFPICLLGVIAIGGIATTANPVY 113 (488)
Q Consensus 34 ~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~ 113 (488)
..+++.+|+++|+++..+++.+||.||.++++++|++|.+.|+++|++|+++++|++++++++|||+++|++++++++.+
T Consensus 4 ~~~a~~~p~~~a~~~~~~~~~~ty~~l~~~~~~la~~L~~~g~~~~~~V~v~~~~~~~~~~~~~a~~~~G~~~~~l~~~~ 83 (511)
T PRK13391 4 GIHAQTTPDKPAVIMASTGEVVTYRELDERSNRLAHLFRSLGLKRGDHVAIFMENNLRYLEVCWAAERSGLYYTCVNSHL 83 (511)
T ss_pred hhhHhhCCCceEEEecCCCCEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhccEEecccccc
Confidence 46788899999998765578899999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhhcCCeEEEEccccHHHHhccC-----CC-eEEEcccCcccCCCCcCCCCccchHHHHhhcCCCCCCCCCC
Q 043601 114 TVSELSKQVKDSSPKLVVTVPELWERVKDFN-----IP-AVLLGSNHIVSPRGLRSSSNIVYFDELIELSGNASNFPDVS 187 (488)
Q Consensus 114 ~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~-----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (488)
+.+.+.++++.++++.++++.+....+.... .. .+....+ ........+++...... . ...
T Consensus 84 ~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~---~--~~~ 150 (511)
T PRK13391 84 TPAEAAYIVDDSGARALITSAAKLDVARALLKQCPGVRHRLVLDGD--------GELEGFVGYAEAVAGLP---A--TPI 150 (511)
T ss_pred CHHHHHHHHhccCCcEEEEchhhHHHHHHHHhcCCCceEEEEecCC--------CCCcccccHHHHhcCCC---C--CCC
Confidence 9999999999999999999987665443221 11 1111111 01111222333322111 1 111
Q ss_pred CCCCCEEEEEcccCCCCCCchhhh--ccHHHHHHh-hHHhhhhhhcCCCCcEEEEecchhhHHhHHHHHHHHhhCCceEE
Q 043601 188 VKQTDTAALLYSSGTTGVGKGAIL--THKNFIASS-LMTAMDQELAGALDYVTLCVLPMFHVFGLSFVVYAQLQKGNCVV 264 (488)
Q Consensus 188 ~~~~~~a~i~~TSGtTG~pK~v~~--t~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~ 264 (488)
...++.++++|||||||.||+|++ +|.++.... ........+....++++++..|++|..++ ...+.++..|++++
T Consensus 151 ~~~~~~a~il~TSGtTG~PKgv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~h~~~~-~~~~~~~~~g~~~~ 229 (511)
T PRK13391 151 ADESLGTDMLYSSGTTGRPKGIKRPLPEQPPDTPLPLTAFLQRLWGFRSDMVYLSPAPLYHSAPQ-RAVMLVIRLGGTVI 229 (511)
T ss_pred CCcccccEEEECCCCCCCCCEEEEccccchhhhhhHHHHHHHHhcCCCCCCeEEEcCCHHHHHHH-HHHHHHHHcCceEE
Confidence 234567899999999999999995 465543321 11223334456778899999999999888 56677899999999
Q ss_pred EcCCCCHHHHHHHHHhcCccEEEecHHHHHHHHhcCCc-cCCCCCCCccEEEEccCCCcHHHHHHHHhhCCCCeEEeccC
Q 043601 265 SMRKFDLETALRAIEKYRVTHWWVVPPIILALAKNVSL-VKKFDLSSLKGIGSGAAPLRKELVEECSKNLPTVTVFQGYG 343 (488)
Q Consensus 265 ~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~-~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~i~~~YG 343 (488)
+.+.+++..+++.++++++|++.++|+++..+.+.... ....+++++|.+++||+++++++.+.+.+.++ ..+++.||
T Consensus 230 ~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~~~~gg~~~~~~~~~~~~~~~g-~~v~~~YG 308 (511)
T PRK13391 230 VMEHFDAEQYLALIEEYGVTHTQLVPTMFSRMLKLPEEVRDKYDLSSLEVAIHAAAPCPPQVKEQMIDWWG-PIIHEYYA 308 (511)
T ss_pred ECCCCCHHHHHHHHHHhCCeEEEehHHHHHHHHhCchhhcccCCccceeEEEEccCCCCHHHHHHHHHHcC-Cceeeeec
Confidence 99889999999999999999999999999988765211 22346789999999999999999999999887 88999999
Q ss_pred cccccccccccCCCCCCCCCCceeecCCCceEEEEeCCCCCCCCCCCcceEEEec---------------------CCcc
Q 043601 344 MTETCGVVTVENPLLGVQNSGSTGTLVAGVEAQIVCVDTLKPLPPNQVGELWVRG---------------------PILM 402 (488)
Q Consensus 344 ~tE~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g---------------------~~~~ 402 (488)
+||++.+....... .....+++|+|+++ .++++| +++++++.|+.|||+++| .|++
T Consensus 309 ~tE~~~~~~~~~~~-~~~~~~~vG~~~~g-~~~i~d-~~~~~~~~g~~Gel~~~g~~~~gy~~~~~~~~~~~~~~~~w~~ 385 (511)
T PRK13391 309 ATEGLGFTACDSEE-WLAHPGTVGRAMFG-DLHILD-DDGAELPPGEPGTIWFEGGRPFEYLNDPAKTAEARHPDGTWST 385 (511)
T ss_pred cccccceEEecCcc-ccccCCCcCCcccc-eEEEEC-CCCCCCCCCCceEEEEecCcceEEcCChhHhHHhhccCCCEEe
Confidence 99998765433221 23456789999999 689998 688999999999999998 4888
Q ss_pred ccceEEEccCCcEEEEcccCcceeeCcEEe---eHhHHHhcCCCeeeeEEEeecCCCCCceEEEEEEeCCCCCC---CHH
Q 043601 403 PGDLGYFDEHGQLFIVDRIKELIKCNGFQV---ELEGVLVSHPEILDAVVIPFPDPEAGEVPIAYVVRSPNSSL---TKE 476 (488)
Q Consensus 403 tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v---~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~---~~~ 476 (488)
|||+|+++++|.+++.||.+|++|++|.+| +||+++.++|.|.+++|++.++...++.+++++++.++... ..+
T Consensus 386 TGD~g~~~~~g~l~~~gR~~~~i~~~G~~v~~~eie~~l~~~~~v~~~~v~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 465 (511)
T PRK13391 386 VGDIGYVDEDGYLYLTDRAAFMIISGGVNIYPQEAENLLITHPKVADAAVFGVPNEDLGEEVKAVVQPVDGVDPGPALAA 465 (511)
T ss_pred cCCEEEECCCccEEEeccCCCEEEeCCEEECHHHHHHHHHhCCCcceEEEEecCCcccCceeEEEEEECCCCCcccchHH
Confidence 999999999999999999999999999999 99999999999999999999998888999999988765322 347
Q ss_pred HHHHHHHhhcCC
Q 043601 477 DVQKFVANDSQL 488 (488)
Q Consensus 477 ~i~~~~~~~l~~ 488 (488)
+++++++++|++
T Consensus 466 ~l~~~~~~~l~~ 477 (511)
T PRK13391 466 ELIAFCRQRLSR 477 (511)
T ss_pred HHHHHHHhhccc
Confidence 899999988763
No 103
>PRK07445 O-succinylbenzoic acid--CoA ligase; Reviewed
Probab=100.00 E-value=2.9e-54 Score=427.61 Aligned_cols=377 Identities=22% Similarity=0.307 Sum_probs=310.0
Q ss_pred ceeHHHHHHHHHHHHHHHHHcCC-CCCCEEEEEcCCCcchHHHHHHHHHcCCeEeecCCCCCHHHHHHHHhhcCCeEEEE
Q 043601 54 SLTFSQFKSIVIKVSHGFRHLGV-TKHDVVLIFAPNSIQFPICLLGVIAIGGIATTANPVYTVSELSKQVKDSSPKLVVT 132 (488)
Q Consensus 54 ~~Ty~el~~~~~~la~~L~~~g~-~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~ 132 (488)
-+.|+||.++++++|++|++.|+ ++|++|+++++|++++++++|||+++|++++|++|.++..++.++++.++++++++
T Consensus 19 ~~~~~el~~~~~~~a~~L~~~g~~~~~~~V~i~~~n~~e~~~~~~A~~~~G~~~vpl~~~~~~~~~~~~~~~~~~~~~i~ 98 (452)
T PRK07445 19 GYNSQRFYQLAQQLYLQLQQLATPRTPPKILLAESDPLQFLAAFLAAVAAGCPVFLANPHWGQQEWQQVLNLVQPDQIWG 98 (452)
T ss_pred ecChHHHHHHHHHHHHHHHHhcCCCCCCeEEEecCCCHHHHHHHHHHHHhCcEEEeeccCCCHHHHHHHHHhcCCCEEEe
Confidence 46799999999999999999988 57999999999999999999999999999999999999999999999999999998
Q ss_pred ccccHHHHhccCCCeEEEcccCcccCCCCcCCCCccchHHHHhhcCCCCCCCCCCCCCCCEEEEEcccCCCCCCchhhhc
Q 043601 133 VPELWERVKDFNIPAVLLGSNHIVSPRGLRSSSNIVYFDELIELSGNASNFPDVSVKQTDTAALLYSSGTTGVGKGAILT 212 (488)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t 212 (488)
+.+..... . .. . . . ......++++++++|||||||.||+|++|
T Consensus 99 ~~~~~~~~------------~--------~~------~-------~--~--~~~~~~~~~~~~i~~TSGTTG~PKgV~~t 141 (452)
T PRK07445 99 LDQLKLSH------------P--------PP------L-------P--S--QGILPNLETGWIMIPTGGSSGQIRFAIHT 141 (452)
T ss_pred cCcccccc------------C--------CC------C-------C--c--cccCCCCCCcEEEEeCCCCCCCCcEEEec
Confidence 76532100 0 00 0 0 0 00123467999999999999999999999
Q ss_pred cHHHHHHhhHHhhhhhhcCCCCcEEEEecchhhHHhHHHHHHHHhhCCceEEEcCCCCHHHHHHHHHhcCccEEEecHHH
Q 043601 213 HKNFIASSLMTAMDQELAGALDYVTLCVLPMFHVFGLSFVVYAQLQKGNCVVSMRKFDLETALRAIEKYRVTHWWVVPPI 292 (488)
Q Consensus 213 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~l~~~p~~ 292 (488)
|+++..... .....+...+ +..++.+|++|.+|+ ..++.++..|+++++.+............+++++++.++|++
T Consensus 142 ~~~l~~~~~--~~~~~~~~~~-~~~~~~~Pl~h~~g~-~~~~~~l~~G~t~v~~~~~~~~~~~~~~~~~~~t~~~~vP~~ 217 (452)
T PRK07445 142 WETLTASVQ--GFQRYFQLQQ-VNSFCVLPLYHVSGL-MQFMRSFLTGGKLVILPYKRLKSGQELPPNPSDFFLSLVPTQ 217 (452)
T ss_pred hHHHHHHHH--HHHHHhcCCC-CceEeccCchhhhhH-HHHHHHHHcCCeEEEcChHhccchhhhhhhcCceEEEehHHH
Confidence 999877632 2333343433 457888999999998 677889999999998864322222334457889999999999
Q ss_pred HHHHHhcCCccCCCCCCCccEEEEccCCCcHHHHHHHHhhCCCCeEEeccCcccccccccccCCCCCCCCCCceeecCCC
Q 043601 293 ILALAKNVSLVKKFDLSSLKGIGSGAAPLRKELVEECSKNLPTVTVFQGYGMTETCGVVTVENPLLGVQNSGSTGTLVAG 372 (488)
Q Consensus 293 ~~~l~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~g~~~~~ 372 (488)
+..+++. ....+++||.+++||+++++++.+++.+. ++++++.||+||++..++...+........++|+|+|+
T Consensus 218 l~~l~~~----~~~~l~~l~~i~~gG~~l~~~~~~~~~~~--~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~p~ 291 (452)
T PRK07445 218 LQRLLQL----RPQWLAQFRTILLGGAPAWPSLLEQARQL--QLRLAPTYGMTETASQIATLKPDDFLAGNNSSGQVLPH 291 (452)
T ss_pred HHHHHhh----ChhhhhcceEEEECCccCCHHHHHHHHhc--CCeEecCcchhhhcccccccCchhhccCCCcCCccCCC
Confidence 9998863 23357899999999999999999998764 48999999999998655443332222345679999999
Q ss_pred ceEEEEeCCCCCCCCCCCcceEEEecC---------------CccccceEEEccCCcEEEEcccCcceeeCcEEe---eH
Q 043601 373 VEAQIVCVDTLKPLPPNQVGELWVRGP---------------ILMPGDLGYFDEHGQLFIVDRIKELIKCNGFQV---EL 434 (488)
Q Consensus 373 ~~~~i~d~~~~~~~~~g~~Gel~v~g~---------------~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v---~i 434 (488)
++++|+ .|+.|||+++|+ |++|||+|++++||++++.||.||+||.+|++| +|
T Consensus 292 ~~v~i~---------~g~~Gel~v~g~~~~~gY~~~~~~~~g~~~TGDl~~~d~dG~l~~~GR~dd~I~~~G~~V~p~eI 362 (452)
T PRK07445 292 AQITIP---------ANQTGNITIQAQSLALGYYPQILDSQGIFETDDLGYLDAQGYLHILGRNSQKIITGGENVYPAEV 362 (452)
T ss_pred CeEEEc---------CCCcceEEEeCCccchhhcCCccCCCCEEECCCEEEEcCCCCEEEEeecCCEEEECCEEECHHHH
Confidence 999987 367799999875 578999999999999999999999999999999 99
Q ss_pred hHHHhcCCCeeeeEEEeecCCCCCceEEEEEEeCCCCCCCHHHHHHHHHhhcC
Q 043601 435 EGVLVSHPEILDAVVIPFPDPEAGEVPIAYVVRSPNSSLTKEDVQKFVANDSQ 487 (488)
Q Consensus 435 e~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~~~~~~l~ 487 (488)
|.++.++|+|.+++|++.+++..++.++++|+.+++ ..+.++++++++++|+
T Consensus 363 E~~l~~~p~V~~a~V~g~~~~~~g~~~~a~vv~~~~-~~~~~~l~~~~~~~L~ 414 (452)
T PRK07445 363 EAAILATGLVQDVCVLGLPDPHWGEVVTAIYVPKDP-SISLEELKTAIKDQLS 414 (452)
T ss_pred HHHHHhCCCcceEEEEeccCcCCCcEEEEEEEeCCC-CCCHHHHHHHHHHhCC
Confidence 999999999999999999998889999999998765 4678999999999886
No 104
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=2.4e-53 Score=430.29 Aligned_cols=432 Identities=23% Similarity=0.363 Sum_probs=347.1
Q ss_pred EEEeCCCCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHHcCCeEeecCCCCCHHHHHHHHhh
Q 043601 45 ALIDADSGESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQFPICLLGVIAIGGIATTANPVYTVSELSKQVKD 124 (488)
Q Consensus 45 a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~ 124 (488)
|++.. ++.+||.||.++++++|++|.+.|+++|++|+++++|++++++++|||+++|++++++++.++.+++..+++.
T Consensus 4 ~~~~~--~~~~Ty~el~~~~~~la~~l~~~g~~~g~~V~v~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~ 81 (509)
T PRK12406 4 TIISG--DRRRSFDELAQRAARAAGGLAALGVRPGDCVALLMRNDFAFFEAAYAAMRLGAYAVPVNWHFKPEEIAYILED 81 (509)
T ss_pred EEEEC--CeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCeEEEecCcccCHHHHHHHHhc
Confidence 55555 6899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCeEEEEccccHHHHhccC---CCeEEEcccCc------ccCCCCcCCCCccchHHHHhhcCCCCCCCCCCCCCCCEEE
Q 043601 125 SSPKLVVTVPELWERVKDFN---IPAVLLGSNHI------VSPRGLRSSSNIVYFDELIELSGNASNFPDVSVKQTDTAA 195 (488)
Q Consensus 125 ~~~~~vi~~~~~~~~~~~~~---~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 195 (488)
+++++++++.+....+.... ...+....... ..............+++..... ........+++++
T Consensus 82 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~a~ 156 (509)
T PRK12406 82 SGARVLIAHADLLHGLASALPAGVTVLSVPTPPEIAAAYRISPALLTPPAGAIDWEGWLAQQ-----EPYDGPPVPQPQS 156 (509)
T ss_pred cCCcEEEEccchhhhhhhhhhcccceeecccccccccccccccccccCCCCccCHHHHhccc-----CccCCCCCCCceE
Confidence 99999999887665543221 11111110000 0000001112223454443221 1122345689999
Q ss_pred EEcccCCCCCCchhhhccHHHHHHhh-HHhhhhhhcCCCCcEEEEecchhhHHhHHHHHHHHhhCCceEEEcCCCCHHHH
Q 043601 196 LLYSSGTTGVGKGAILTHKNFIASSL-MTAMDQELAGALDYVTLCVLPMFHVFGLSFVVYAQLQKGNCVVSMRKFDLETA 274 (488)
Q Consensus 196 i~~TSGtTG~pK~v~~t~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~ 274 (488)
++|||||||.||+|+++|........ .......+...+++++++..|++|..+. ...+.++..|+++++.+..++..+
T Consensus 157 i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~ 235 (509)
T PRK12406 157 MIYTSGTTGHPKGVRRAAPTPEQAAAAEQMRALIYGLKPGIRALLTGPLYHSAPN-AYGLRAGRLGGVLVLQPRFDPEEL 235 (509)
T ss_pred EEECCCCCCCCceEEEechhHHHHHHHHHhhhhhcCCCCCceEEEEeCCcccchH-HHHHHHHhhheEEEEccCCCHHHH
Confidence 99999999999999987765433211 1123344556788999999999998877 344456888999999888899999
Q ss_pred HHHHHhcCccEEEecHHHHHHHHhcCCc-cCCCCCCCccEEEEccCCCcHHHHHHHHhhCCCCeEEeccCcccccccccc
Q 043601 275 LRAIEKYRVTHWWVVPPIILALAKNVSL-VKKFDLSSLKGIGSGAAPLRKELVEECSKNLPTVTVFQGYGMTETCGVVTV 353 (488)
Q Consensus 275 ~~~l~~~~~t~l~~~p~~~~~l~~~~~~-~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~i~~~YG~tE~~~~~~~ 353 (488)
++.++++++|.+.++|+++..+++.... ....+++++|.+++||+++++++.+.+.+.++ ..+++.||+||++.+++.
T Consensus 236 ~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~l~~v~~gg~~~~~~~~~~~~~~~~-~~~~~~YG~tE~~~~~~~ 314 (509)
T PRK12406 236 LQLIERHRITHMHMVPTMFIRLLKLPEEVRAKYDVSSLRHVIHAAAPCPADVKRAMIEWWG-PVIYEYYGSTESGAVTFA 314 (509)
T ss_pred HHHHHHcCCeEEEccHHHHHHHHhCchhhcccCCCCceeEEEEcCCCCCHHHHHHHHHHcC-CcEEeeccccccCceEec
Confidence 9999999999999999999999875211 23456789999999999999999999999886 889999999999976554
Q ss_pred cCCCCCCCCCCceeecCCCceEEEEeCCCCCCCCCCCcceEEEecC---------------------CccccceEEEccC
Q 043601 354 ENPLLGVQNSGSTGTLVAGVEAQIVCVDTLKPLPPNQVGELWVRGP---------------------ILMPGDLGYFDEH 412 (488)
Q Consensus 354 ~~~~~~~~~~~~~g~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~---------------------~~~tGD~~~~~~~ 412 (488)
... .....++++|+|.+++.++++| +++++++.|+.|||+++|+ |+.|||+++++++
T Consensus 315 ~~~-~~~~~~~~~G~~~~~~~~~i~d-~~~~~~~~g~~Gel~v~~~~~~~~~y~~~~~~~~~~~~~~~~~TGD~~~~~~~ 392 (509)
T PRK12406 315 TSE-DALSHPGTVGKAAPGAELRFVD-EDGRPLPQGEIGEIYSRIAGNPDFTYHNKPEKRAEIDRGGFITSGDVGYLDAD 392 (509)
T ss_pred Ccc-cccccCCCcCccCCCcEEEEEC-CCCCCCCCCCceEEEEECCccccccccCCchhcccccCCCCeEEccEEEEcCC
Confidence 322 2234567899999999999999 5789999999999999874 4679999999999
Q ss_pred CcEEEEcccCcceeeCcEEe---eHhHHHhcCCCeeeeEEEeecCCCCCceEEEEEEeCCCCCCCHHHHHHHHHhhcC
Q 043601 413 GQLFIVDRIKELIKCNGFQV---ELEGVLVSHPEILDAVVIPFPDPEAGEVPIAYVVRSPNSSLTKEDVQKFVANDSQ 487 (488)
Q Consensus 413 g~l~~~GR~~d~i~~~G~~v---~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~~~~~~l~ 487 (488)
|.+++.||.+|++|++|.+| +||..+.++++|.++++++.++...++.++++|++.++...+.++++++++++|+
T Consensus 393 g~~~~~GR~~d~ik~~G~~v~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~l~~~l~ 470 (509)
T PRK12406 393 GYLFLCDRKRDMVISGGVNIYPAEIEAVLHAVPGVHDCAVFGIPDAEFGEALMAVVEPQPGATLDEADIRAQLKARLA 470 (509)
T ss_pred ceEEEeecccceEEECCEEECHHHHHHHHHhCCCeeEEEEEeeeccccCceeEEEEEECCCCCCCHHHHHHHHHHhcc
Confidence 99999999999999999999 9999999999999999999998888889999999887766788999999998875
No 105
>PRK05691 peptide synthase; Validated
Probab=100.00 E-value=4.3e-54 Score=516.59 Aligned_cols=438 Identities=18% Similarity=0.227 Sum_probs=362.5
Q ss_pred CCHHHHHhhccccCCCceEEEeCCCCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHHcCCeE
Q 043601 27 LSMVHFLFRNSASYGSKSALIDADSGESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQFPICLLGVIAIGGIA 106 (488)
Q Consensus 27 ~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~ 106 (488)
.++.++|.++++++|+++|+++. +..+||+||+++++++|+.|++.|+++|++|+|++++++++++++||++++|+++
T Consensus 3720 ~~~~~~~~~~~~~~p~~~Av~~~--~~~~tY~eL~~~~~~la~~L~~~gv~~~~~V~v~~~~s~~~~v~~lavlkaG~a~ 3797 (4334)
T PRK05691 3720 QSYVRLFEAQVAAHPQRIAASCL--DQQWSYAELNRAANRLGHALRAAGVGVDQPVALLAERGLDLLGMIVGSFKAGAGY 3797 (4334)
T ss_pred cCHHHHHHHHHHhCCCceEEEcC--CCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHhhCcEE
Confidence 68999999999999999999998 7889999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCHHHHHHHHhhcCCeEEEEccccHHHHhccCCCeEEEcccCcccCCCCcCCCCccchHHHHhhcCCCCCCCCC
Q 043601 107 TTANPVYTVSELSKQVKDSSPKLVVTVPELWERVKDFNIPAVLLGSNHIVSPRGLRSSSNIVYFDELIELSGNASNFPDV 186 (488)
Q Consensus 107 v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (488)
||++|.++.+.+.++++++++++++++.................. ...+..+++...... ....+..
T Consensus 3798 vpld~~~p~~r~~~il~~~~~~~~l~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~-~~~~~~~ 3864 (4334)
T PRK05691 3798 LPLDPGLPAQRLQRIIELSRTPVLVCSAACREQARALLDELGCAN------------RPRLLVWEEVQAGEV-ASHNPGI 3864 (4334)
T ss_pred eCCCCCChHHHHHHHHHhcCCCEEEecCcccchhhhhhccccccc------------ccceeeecccccccc-cccCCCC
Confidence 999999999999999999999999999875443222110000000 000000111100000 0112223
Q ss_pred CCCCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHhhhhhhcCCCCcEEEEecchhhHHhHHHHHHHHhhCCceEEEc
Q 043601 187 SVKQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTAMDQELAGALDYVTLCVLPMFHVFGLSFVVYAQLQKGNCVVSM 266 (488)
Q Consensus 187 ~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~ 266 (488)
...+++++||+|||||||.||||+++|+++.+. .......+...+.++++...++.+..+. +.++.++..|++++++
T Consensus 3865 ~~~~~~~ayvi~TSGSTG~PKGV~~~h~~~~~~--~~~~~~~~~~~~~~~~~~~~s~~fd~s~-~~~~~~l~~G~~l~i~ 3941 (4334)
T PRK05691 3865 YSGPDNLAYVIYTSGSTGLPKGVMVEQRGMLNN--QLSKVPYLALSEADVIAQTASQSFDISV-WQFLAAPLFGARVEIV 3941 (4334)
T ss_pred CCCCCceEEEEECCCCCCCCCEEEeehHHHHHH--HHHHHHhcCCCccceEEEecCCchhHHH-HHHHHHHhCCCEEEEc
Confidence 456789999999999999999999999999988 4445566778899999999999999888 8889999999999988
Q ss_pred CC---CCHHHHHHHHHhcCccEEEecHHHHHHHHhcCCccCCCCCCCccEEEEccCCCcHHHHHHHHhhCCCCeEEeccC
Q 043601 267 RK---FDLETALRAIEKYRVTHWWVVPPIILALAKNVSLVKKFDLSSLKGIGSGAAPLRKELVEECSKNLPTVTVFQGYG 343 (488)
Q Consensus 267 ~~---~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~i~~~YG 343 (488)
+. .++..+++.++++++|++.++|+++..++.. ....+++||.+++|||++++++.++|.+.++++++++.||
T Consensus 3942 ~~~~~~~~~~l~~~~~~~~vt~~~~~Ps~~~~l~~~----~~~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG 4017 (4334)
T PRK05691 3942 PNAIAHDPQGLLAHVQAQGITVLESVPSLIQGMLAE----DRQALDGLRWMLPTGEAMPPELARQWLQRYPQIGLVNAYG 4017 (4334)
T ss_pred CccccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhh----ccccCCCceEEEecCCcCCHHHHHHHHHhCCCCeEEeCcc
Confidence 64 5789999999999999999999999988764 2335789999999999999999999999888899999999
Q ss_pred cccccccccccCCCC--CCCCCCceeecCCCceEEEEeCCCCCCCCCCCcceEEEecC----------------------
Q 043601 344 MTETCGVVTVENPLL--GVQNSGSTGTLVAGVEAQIVCVDTLKPLPPNQVGELWVRGP---------------------- 399 (488)
Q Consensus 344 ~tE~~~~~~~~~~~~--~~~~~~~~g~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~---------------------- 399 (488)
+||++..++...... ......++|+|++++.++|+| +.++++|.|..|||+|+|+
T Consensus 4018 ~TE~t~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d-~~~~~~p~g~~GEL~i~G~~v~~GY~~~~~~t~~~f~~~p~ 4096 (4334)
T PRK05691 4018 PAECSDDVAFFRVDLASTRGSYLPIGSPTDNNRLYLLD-EALELVPLGAVGELCVAGTGVGRGYVGDPLRTALAFVPHPF 4096 (4334)
T ss_pred CccceeEEEEEEcccccccCCcCCCCCccCCCEEEEEC-CCCCCCCCCCceEEEEecccccccccCCcccchhhcccCCC
Confidence 999987665433221 122345799999999999999 7899999999999999884
Q ss_pred ------CccccceEEEccCCcEEEEcccCcceeeCcEEe---eHhHHHhcCCCeeeeEEEeecCCCCCceEEEEEEeCCC
Q 043601 400 ------ILMPGDLGYFDEHGQLFIVDRIKELIKCNGFQV---ELEGVLVSHPEILDAVVIPFPDPEAGEVPIAYVVRSPN 470 (488)
Q Consensus 400 ------~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v---~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~ 470 (488)
+|+|||+|++++||.++++||+|++||++|.+| |||+++.++|+|.+++|+... ...++.++++|+..++
T Consensus 4097 ~~~~~~~yrTGDl~~~~~dG~l~~~GR~d~qvki~G~riel~eIE~~l~~~~~v~~a~v~~~~-~~~~~~l~a~~~~~~~ 4175 (4334)
T PRK05691 4097 GAPGERLYRTGDLARRRSDGVLEYVGRIDHQVKIRGYRIELGEIEARLHEQAEVREAAVAVQE-GVNGKHLVGYLVPHQT 4175 (4334)
T ss_pred CCCCceeeccCcceeecCCCcEEEecccCCcEEeceEEecHHHHHHHHHhCCCccEEEEEEec-CCCCcEEEEEEeCCcc
Confidence 588999999999999999999999999999999 999999999999999887654 3456789999987655
Q ss_pred CCC---CHHHHHHHHHhhcCC
Q 043601 471 SSL---TKEDVQKFVANDSQL 488 (488)
Q Consensus 471 ~~~---~~~~i~~~~~~~l~~ 488 (488)
... ..++++++|+++||.
T Consensus 4176 ~~~~~~~~~~l~~~l~~~Lp~ 4196 (4334)
T PRK05691 4176 VLAQGALLERIKQRLRAELPD 4196 (4334)
T ss_pred cccchHHHHHHHHHHHhhCCh
Confidence 322 246789999998873
No 106
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=100.00 E-value=1.9e-54 Score=427.63 Aligned_cols=378 Identities=34% Similarity=0.537 Sum_probs=301.8
Q ss_pred HhhccccCCCceEEEeCCCCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHHcCCeEeecCCC
Q 043601 33 LFRNSASYGSKSALIDADSGESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQFPICLLGVIAIGGIATTANPV 112 (488)
Q Consensus 33 l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~ 112 (488)
|+++|+++|+++|+++ +.++++||+||+++++++|..|++.|+++|++|+++++|++++++++|||+++|++++|++|.
T Consensus 1 f~~~a~~~pd~~a~~~-~~~~~~Ty~~l~~~v~~la~~L~~~g~~~~~~V~i~~~n~~~~~~~~~A~~~~G~~~v~l~~~ 79 (417)
T PF00501_consen 1 FERQAQRYPDRIALID-DEGRSLTYKQLYERVRKLAAALRKLGVKKGDRVAILLPNSIEFVVAFLACLRAGAIPVPLDPS 79 (417)
T ss_dssp HHHHHHHSTTSEEEEE-TTTEEEEHHHHHHHHHHHHHHHHHTTSSTTSEEEEEESSSHHHHHHHHHHHHTT-EEEEEETT
T ss_pred ChhHHhhCCCceEEEE-CCCEEEEHHHHHHHHHHHhhHHHHhCCCccccccccCCccceeeeeecccccccccccccccc
Confidence 5789999999999999 338999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHhhcCCeEEEE----ccccHHHHhcc----CCC--eEEEcccCcccCCCCcCCCCccchHHHHhhcCCCCC
Q 043601 113 YTVSELSKQVKDSSPKLVVT----VPELWERVKDF----NIP--AVLLGSNHIVSPRGLRSSSNIVYFDELIELSGNASN 182 (488)
Q Consensus 113 ~~~~~l~~~l~~~~~~~vi~----~~~~~~~~~~~----~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (488)
++.+++.++++.++++++|+ +......+... ... .+.++.. .....+.+...... ..
T Consensus 80 ~~~~~~~~~l~~~~~~~ii~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~-~~ 146 (417)
T PF00501_consen 80 LSEDELRHILRQSGPKVIITSEAVDSEPLKKLKSIFKQEDPSSSIIILDRD------------DLPKKEALKSASLS-DE 146 (417)
T ss_dssp SSHHHHHHHHHHHTESEEEECHHHSCHHHHHHHHHHTTSTTTEEEEEESHS------------SCTTCHHHHHHHHC-HC
T ss_pred cccccccccccccceeEEEEeccccccccccchhhhccccccccccccccc------------cccccccccccccc-cc
Confidence 99999999999999999997 22222222211 111 2222211 11111111111110 00
Q ss_pred CCCCC-CCCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHhhhhhhcCCCCcEEEEecchhhHHhHHHHHHHHhhCCc
Q 043601 183 FPDVS-VKQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTAMDQELAGALDYVTLCVLPMFHVFGLSFVVYAQLQKGN 261 (488)
Q Consensus 183 ~~~~~-~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~ 261 (488)
.. .. ..++++++++|||||||.||+|.++|+++.+.............. +++++.+|++|.+|+...++.++..|+
T Consensus 147 ~~-~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~--d~~l~~~p~~~~~g~~~~~~~~l~~G~ 223 (417)
T PF00501_consen 147 PQ-SPEDSPDDPAFILFTSGTTGKPKGVVLTHRNLLAQARALALPEYFGLG--DRILSFLPLSHIFGLISALLAALFSGA 223 (417)
T ss_dssp SH-STTHTTTSEEEEEEESSSSSSEEEEEEEHHHHHHHHHHHHHHHTTTTT--TEEEESS-TTSHHHHHHHHHHHHHCTS
T ss_pred cc-cCCCCccceeEeeccccccccccccccccccccccccccccccccccC--ceEEeeccccccccccccccccccccc
Confidence 00 00 056899999999999999999999999998874432211121112 599999999999999889999999999
Q ss_pred eEEEcCCCC---HHHHHHHHHhcCccEEEecHHHHHHHHhcCCcc----CCCCCCCccEEEEccCCCcHHHHHHHHhhCC
Q 043601 262 CVVSMRKFD---LETALRAIEKYRVTHWWVVPPIILALAKNVSLV----KKFDLSSLKGIGSGAAPLRKELVEECSKNLP 334 (488)
Q Consensus 262 ~~~~~~~~~---~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~----~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~ 334 (488)
++++.+... ++.+++.++++++|+++++|+++..+++. ... ...++++||.++++|+++++++.+++++.++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~-~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~ 302 (417)
T PF00501_consen 224 TLVLPSPFDLFDPESLLELISRYKPTILFAVPSMLEALLQS-PEEKTKISKKDLSSLRTVISGGEPLPPDLLRRLRKAFG 302 (417)
T ss_dssp EEEEESSHHHHHHHHHHHHHHHHTESEEEEEHHHHHHHHHH-HHTTHHGTTTTGTT-SEEEEESST-CHHHHHHHHHHHT
T ss_pred cccccccccccccccchhccccccccccccccccccccccc-ccccccccccccccccccccccccCChhhccccccccc
Confidence 999998754 46789999999999999999999999974 322 2357889999999999999999999999998
Q ss_pred CCeEEeccCcccccccccccCCCCCCCCCCceeecCCCceEEEEeCCCCCCCCCCCcceEEEecC---------------
Q 043601 335 TVTVFQGYGMTETCGVVTVENPLLGVQNSGSTGTLVAGVEAQIVCVDTLKPLPPNQVGELWVRGP--------------- 399 (488)
Q Consensus 335 ~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~--------------- 399 (488)
...+++.||+||++.+++.........+.+++|.|+|+++++|+|++++++++.|+.|||+++|+
T Consensus 303 ~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~g~~Gei~i~~~~~~~gy~~~~~~~~~ 382 (417)
T PF00501_consen 303 NAPIINLYGSTETGSIATIRPPEDDIEKPGSVGKPLPGVEVKIVDPNTGEPLPPGEPGEIVIRGPNVFSGYYNDPELTAE 382 (417)
T ss_dssp TSEEEEEEEEGGGSSEEEEEETTTHHSSTTSEBEESTTEEEEEECTTTSSBESTTSEEEEEEESTTSBSEETTBHHHHHH
T ss_pred cccceecccccccceeeecccccccccccccccccccccccccccccccccccccccccccccCCccceeeecccccccc
Confidence 45999999999999888755322223567889999999999999987799999999999999974
Q ss_pred ------CccccceEEEccCCcEEEEcccCcceeeC
Q 043601 400 ------ILMPGDLGYFDEHGQLFIVDRIKELIKCN 428 (488)
Q Consensus 400 ------~~~tGD~~~~~~~g~l~~~GR~~d~i~~~ 428 (488)
|++|||+|++|+||.++++||.||+||++
T Consensus 383 ~~~~~~~~~TGD~g~~d~~G~~~~~GR~~~~i~~~ 417 (417)
T PF00501_consen 383 AFIDDGWYRTGDLGRLDEDGYLYILGRSDDMIKVR 417 (417)
T ss_dssp HEETTSEEEEEEEEEEETTSEEEEEEEGSCEEEET
T ss_pred ccccccceecceEEEECCCCeEEEEEeeCCEEEeC
Confidence 78899999999999999999999999974
No 107
>PRK09192 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.7e-53 Score=437.23 Aligned_cols=437 Identities=22% Similarity=0.280 Sum_probs=344.4
Q ss_pred CCHHHHHhhccccCCCceEEEeCCC--CcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHHcCC
Q 043601 27 LSMVHFLFRNSASYGSKSALIDADS--GESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQFPICLLGVIAIGG 104 (488)
Q Consensus 27 ~~l~~~l~~~a~~~p~~~a~~~~~~--~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~ 104 (488)
.++.++|...++.+|+..++ +.+. .+.+||.||+.+++++|++|++.|+++|++|+++++|++++++++|||+++|+
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~gi~~gd~V~l~~~n~~~~~~~~lA~~~~G~ 99 (579)
T PRK09192 21 PTLVEALDYAALGEAGMNFY-DRRGQLEEALPYQTLRARAEAGARRLLALGLKPGDRVALIAETDGDFVEAFFACQYAGL 99 (579)
T ss_pred hhHHHHHHHhhccCCceEEE-ecCCCEEEEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCchhHHHHHHHHHHcCC
Confidence 68999999999998876655 4322 26799999999999999999999999999999999999999999999999999
Q ss_pred eEeecCCCCC-------HHHHHHHHhhcCCeEEEEccccHHHHhccCCCeEEEcccCcccCCCCcCCCCccchHHHHhhc
Q 043601 105 IATTANPVYT-------VSELSKQVKDSSPKLVVTVPELWERVKDFNIPAVLLGSNHIVSPRGLRSSSNIVYFDELIELS 177 (488)
Q Consensus 105 ~~v~l~~~~~-------~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (488)
+++|+++..+ .+++..+++.++++++++++.....+....... ......+++++....
T Consensus 100 ~~v~i~~~~~~~~~~~~~~~l~~~i~~~~~~~il~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~ 164 (579)
T PRK09192 100 VPVPLPLPMGFGGRESYIAQLRGMLASAQPAAIITPDELLPWVNEATHGN---------------PLLHVLSHAWFKALP 164 (579)
T ss_pred eeEeccCCcccccchHHHHHHHHHHHhcCCCEEEeChHHHHHHHHhhccc---------------cccceeehhhhcccC
Confidence 9999987543 588999999999999999987766554321000 000011222222111
Q ss_pred CCCCCCCCCCCCCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHhhhh-hhcCCCCcEEEEecchhhHHhHHHHHHHH
Q 043601 178 GNASNFPDVSVKQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTAMDQ-ELAGALDYVTLCVLPMFHVFGLSFVVYAQ 256 (488)
Q Consensus 178 ~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (488)
. .........++++++++|||||||.||+|.++|.+++.... .... .+...++++++..+|++|.+++...++.+
T Consensus 165 ~--~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~sh~~~~~~~~--~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~ 240 (579)
T PRK09192 165 E--ADVALPRPTPDDIAYLQYSSGSTRFPRGVIITHRALMANLR--AISHDGLKVRPGDRCVSWLPFYHDMGLVGFLLTP 240 (579)
T ss_pred C--CccccCCCCCCCeEEEEecCCCCCCCceEEeeHHHHHHHHH--HHHhhcccCCCCCeEEEeCCCCCcchhHHHHHHH
Confidence 1 11122235678999999999999999999999999987633 2333 56678899999999999999987778888
Q ss_pred hhCCceEEEcCC----CCHHHHHHHHHhcCccEEEecHHHHHHHHhcC--CccCCCCCCCccEEEEccCCCcHHHHHHHH
Q 043601 257 LQKGNCVVSMRK----FDLETALRAIEKYRVTHWWVVPPIILALAKNV--SLVKKFDLSSLKGIGSGAAPLRKELVEECS 330 (488)
Q Consensus 257 l~~G~~~~~~~~----~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~--~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~ 330 (488)
+..|+++++... .++..+++.+.+++++.++..|..+..+.... ......+++++|.+++||+++++++.+.|.
T Consensus 241 l~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~l~~~~~~~~~~~~~~l~~lr~~~~gG~~l~~~~~~~~~ 320 (579)
T PRK09192 241 VATQLSVDYLPTRDFARRPLQWLDLISRNRGTISYSPPFGYELCARRVNSKDLAELDLSCWRVAGIGADMIRPDVLHQFA 320 (579)
T ss_pred HHhCCeeEeeCHHHHHHCHHHHHHHHHhcCcEEEeCCcHHHHHHHHhhccccccccchhhhheeEecCccCCHHHHHHHH
Confidence 999999877652 36889999999999998776555554444321 112235688999999999999999999999
Q ss_pred hhCCC-----CeEEeccCcccccccccccCCCCC--------------------------CCCCCceeecCCCceEEEEe
Q 043601 331 KNLPT-----VTVFQGYGMTETCGVVTVENPLLG--------------------------VQNSGSTGTLVAGVEAQIVC 379 (488)
Q Consensus 331 ~~~~~-----~~i~~~YG~tE~~~~~~~~~~~~~--------------------------~~~~~~~g~~~~~~~~~i~d 379 (488)
+.++. ..+++.||+||++..++....... .....++|+|+|++.++|+|
T Consensus 321 ~~~~~~g~~~~~~~~~yG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~p~~~v~i~d 400 (579)
T PRK09192 321 EAFAPAGFDDKAFMPSYGLAEATLAVSFSPLGSGIVVEEVDRDRLEYQGKAVAPGAETRRVRTFVNCGKALPGHEIEIRN 400 (579)
T ss_pred HHHHhcCCChhhcccccccccceeEEeccCCCCCceEEEEcHHHhcCCceeeccCCCCccceeEeecCCcCCCcEEEEEC
Confidence 88641 358999999999865554322100 01124789999999999999
Q ss_pred CCCCCCCCCCCcceEEEecC--------------------CccccceEEEccCCcEEEEcccCcceeeCcEEe---eHhH
Q 043601 380 VDTLKPLPPNQVGELWVRGP--------------------ILMPGDLGYFDEHGQLFIVDRIKELIKCNGFQV---ELEG 436 (488)
Q Consensus 380 ~~~~~~~~~g~~Gel~v~g~--------------------~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v---~ie~ 436 (488)
++++.++.|+.|||+++|+ |++|||+|++ ++|++++.||++|+||++|++| +||.
T Consensus 401 -~~~~~~~~g~~Gel~i~g~~~~~gY~~~~~~~~~~~~dgw~~TGDlg~~-~~G~l~~~GR~dd~i~~~G~~v~p~eIE~ 478 (579)
T PRK09192 401 -EAGMPLPERVVGHICVRGPSLMSGYFRDEESQDVLAADGWLDTGDLGYL-LDGYLYITGRAKDLIIINGRNIWPQDIEW 478 (579)
T ss_pred -CCCCCCCCCCEEEEEecCCchhhhhcCCccccccccCCceeeccceeeE-ECCEEEEEeccccEEEECCCccCHHHHHH
Confidence 5789999999999999986 7899999999 9999999999999999999999 9999
Q ss_pred HHhcCCCee--eeEEEeecCCCCCceEEEEEEeCCCCCCCHHHHHHHHHhhc
Q 043601 437 VLVSHPEIL--DAVVIPFPDPEAGEVPIAYVVRSPNSSLTKEDVQKFVANDS 486 (488)
Q Consensus 437 ~l~~~~~v~--~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~~~~~~l 486 (488)
++.+||+|. +++|++.+++. ++.++++|+..++...+.+++++++++.+
T Consensus 479 ~l~~~p~V~~~~~~v~~~~~~~-~~~~~~~v~~~~~~~~~~~~l~~~~~~~l 529 (579)
T PRK09192 479 IAEQEPELRSGDAAAFSIAQEN-GEKIVLLVQCRISDEERRGQLIHALAALV 529 (579)
T ss_pred HHHhcCCccCCcEEEEEeccCC-CeeEEEEEEecCCChHHHHHHHHHHHHHH
Confidence 999999998 89999998875 45888888877665566778888887764
No 108
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=100.00 E-value=9.5e-53 Score=463.80 Aligned_cols=435 Identities=20% Similarity=0.300 Sum_probs=349.4
Q ss_pred CCCHHHHHhhccccCC-CceEEEeCCCCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHHcCC
Q 043601 26 NLSMVHFLFRNSASYG-SKSALIDADSGESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQFPICLLGVIAIGG 104 (488)
Q Consensus 26 ~~~l~~~l~~~a~~~p-~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~ 104 (488)
..++.+.+.++++++| ++.++.+. +++++||+||+++++++|+.|++ |+++||+|+++++|+++++++++||+++|+
T Consensus 630 ~~~~~~~l~~~~~~~~~~~~ai~~~-~~~~~Ty~el~~~~~~lA~~L~~-g~~~gd~V~i~~~n~~~~~~~~la~~~~G~ 707 (1140)
T PRK06814 630 DRTLFEALIEAAKIHGFKKLAVEDP-VNGPLTYRKLLTGAFVLGRKLKK-NTPPGENVGVMLPNANGAAVTFFALQSAGR 707 (1140)
T ss_pred cCCHHHHHHHHHHHcCCCCeEeECC-CCCccCHHHHHHHHHHHHHHHHh-cCCCCCeEEEEcCCchHHHHHHHHHHHCCC
Confidence 3678888888888887 55666553 36899999999999999999976 999999999999999999999999999999
Q ss_pred eEeecCCCCCHHHHHHHHhhcCCeEEEEccccHHHHh------cc--CCCeEEEcccCcccCCCCcCCCCccchHHHHhh
Q 043601 105 IATTANPVYTVSELSKQVKDSSPKLVVTVPELWERVK------DF--NIPAVLLGSNHIVSPRGLRSSSNIVYFDELIEL 176 (488)
Q Consensus 105 ~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~------~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (488)
+++|+++..+.+++.+++++++++.++++++...... .. ....+.++... ........+.+....
T Consensus 708 v~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-------~~~~~~~~~~~~~~~ 780 (1140)
T PRK06814 708 VPAMINFSAGIANILSACKAAQVKTVLTSRAFIEKARLGPLIEALEFGIRIIYLEDVR-------AQIGLADKIKGLLAG 780 (1140)
T ss_pred EEEEcCCCCCHHHHHHHHHHcCCCEEEecHHHHhhhcchhHHHHhccCceEEEehHhh-------ccCChHHHHHHHhhc
Confidence 9999999999999999999999999999976543221 11 11122221100 000000011111111
Q ss_pred cCCCCCCCCCCCCCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHhhhhhhcCCCCcEEEEecchhhHHhHHHHHHHH
Q 043601 177 SGNASNFPDVSVKQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTAMDQELAGALDYVTLCVLPMFHVFGLSFVVYAQ 256 (488)
Q Consensus 177 ~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (488)
.. +........++++++++|||||||.||+|++||+++... ...........++|++++.+|++|.+++...++.+
T Consensus 781 ~~--~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~~~~~--~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~~ 856 (1140)
T PRK06814 781 RF--PLVYFCNRDPDDPAVILFTSGSEGTPKGVVLSHRNLLAN--RAQVAARIDFSPEDKVFNALPVFHSFGLTGGLVLP 856 (1140)
T ss_pred cC--CccccCCCCCCCcEEEEECCCccCCCcEEEecHHHHHHH--HHHHHHhhCCCCcCEEEEecchHHHHHHHHHHHHH
Confidence 11 111111356789999999999999999999999999876 33345566678899999999999999987788899
Q ss_pred hhCCceEEEcCC-CCHHHHHHHHHhcCccEEEecHHHHHHHHhcCCccCCCCCCCccEEEEccCCCcHHHHHHHHhhCCC
Q 043601 257 LQKGNCVVSMRK-FDLETALRAIEKYRVTHWWVVPPIILALAKNVSLVKKFDLSSLKGIGSGAAPLRKELVEECSKNLPT 335 (488)
Q Consensus 257 l~~G~~~~~~~~-~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~ 335 (488)
+..|+++++.+. .+...+.+.++++++|++.++|+++..+.+. . ...+++++|.+++||+++++++.+.+.+.++
T Consensus 857 l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~-~--~~~~~~~lr~v~~gg~~l~~~~~~~~~~~~~- 932 (1140)
T PRK06814 857 LLSGVKVFLYPSPLHYRIIPELIYDTNATILFGTDTFLNGYARY-A--HPYDFRSLRYVFAGAEKVKEETRQTWMEKFG- 932 (1140)
T ss_pred HHcCCEEEEecCcccHHHHHHHHHhcCCEEEEecHHHHHHHHhh-c--ccccccceeEEEEcCCcCCHHHHHHHHHHhC-
Confidence 999999998764 5677888999999999999999999998765 2 3456889999999999999999999999986
Q ss_pred CeEEeccCcccccccccccCCCCCCCCCCceeecCCCceEEEEeCCCCCCCCCCCcceEEEecC----------------
Q 043601 336 VTVFQGYGMTETCGVVTVENPLLGVQNSGSTGTLVAGVEAQIVCVDTLKPLPPNQVGELWVRGP---------------- 399 (488)
Q Consensus 336 ~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~---------------- 399 (488)
+++++.||+||++..++.+.+. ..+.+++|+|.|++++++.+.+ + .|+.|||+++|+
T Consensus 933 ~~~~~~YG~TE~~~~~~~~~~~--~~~~~~vG~p~~g~~~~~~~~~-~----~~~~Gel~v~g~~~~~gY~~~~~~~~~~ 1005 (1140)
T PRK06814 933 IRILEGYGVTETAPVIALNTPM--HNKAGTVGRLLPGIEYRLEPVP-G----IDEGGRLFVRGPNVMLGYLRAENPGVLE 1005 (1140)
T ss_pred CcEEeccccccccceEEecCCC--CCCCCcCCccCCCCeEEEeecC-C----CCCceEEEEeCCCcchhhcCCCCCCccc
Confidence 8999999999998776654332 3456789999999999998742 2 367799999874
Q ss_pred -----CccccceEEEccCCcEEEEcccCcceeeCcEEe---eHhHHHhcCCCeeeeEEEeecCCCCCceEEEEEEeCCCC
Q 043601 400 -----ILMPGDLGYFDEHGQLFIVDRIKELIKCNGFQV---ELEGVLVSHPEILDAVVIPFPDPEAGEVPIAYVVRSPNS 471 (488)
Q Consensus 400 -----~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v---~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~ 471 (488)
|++|||+|++|+||++++.||.||+||.+|++| +||+++.+++.+.+++|++.+++..++.+++++. +.
T Consensus 1006 ~~~~g~~~TGDl~~~d~dG~l~~~GR~~d~i~~~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~~~~g~~~~~~~~---~~ 1082 (1140)
T PRK06814 1006 PPADGWYDTGDIVTIDEEGFITIKGRAKRFAKIAGEMISLAAVEELAAELWPDALHAAVSIPDARKGERIILLTT---AS 1082 (1140)
T ss_pred cCCCCeEecCCEEEECCCCeEEEEecccCeeeeCCEEECHHHHHHHHHhcCCcccEEEEEcccCCCCceEEEEEc---CC
Confidence 678999999999999999999999999999999 9999999999999999999999888888877654 23
Q ss_pred CCCHHHHHHHHHhh-cC
Q 043601 472 SLTKEDVQKFVAND-SQ 487 (488)
Q Consensus 472 ~~~~~~i~~~~~~~-l~ 487 (488)
..+.++++++++++ ++
T Consensus 1083 ~~~~~~l~~~~~~~~l~ 1099 (1140)
T PRK06814 1083 DATRAAFLAHAKAAGAS 1099 (1140)
T ss_pred CcCHHHHHHHHHHcCCC
Confidence 45788999998864 53
No 109
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.8e-52 Score=423.40 Aligned_cols=417 Identities=28% Similarity=0.407 Sum_probs=339.6
Q ss_pred CcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHHcCCeEeecCCCCCHHHHHHHHhhcCCeEEE
Q 043601 52 GESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQFPICLLGVIAIGGIATTANPVYTVSELSKQVKDSSPKLVV 131 (488)
Q Consensus 52 ~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi 131 (488)
++.+||.||.+.++++|++|.+.|+++|++|+++++|++++++++|||+++|++++|+++.++.+.+..+++.+++++++
T Consensus 9 ~~~~ty~el~~~v~~~a~~L~~~g~~~~~~V~i~~~~~~~~~~~~la~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~ii 88 (502)
T PRK08276 9 GEVVTYGELEARSNRLAHGLRALGLREGDVVAILLENNPEFFEVYWAARRSGLYYTPINWHLTAAEIAYIVDDSGAKVLI 88 (502)
T ss_pred CcEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEeCCCHHHHHHHHHHHhcCcEEEecccccCHHHHHHHHhcCCCCEEE
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EccccHHHHhcc------CCCeEEEcccCcccCCCCcCCCCccchHHHHhhcCCCCCCCCCCCCCCCEEEEEcccCCCCC
Q 043601 132 TVPELWERVKDF------NIPAVLLGSNHIVSPRGLRSSSNIVYFDELIELSGNASNFPDVSVKQTDTAALLYSSGTTGV 205 (488)
Q Consensus 132 ~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~ 205 (488)
+++.....+... ....+.+... .......+++...... .......++.++++|||||||.
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~-----~~~~~~~~~~a~i~~TSGtTG~ 154 (502)
T PRK08276 89 VSAALADTAAELAAELPAGVPLLLVVAG---------PVPGFRSYEEALAAQP-----DTPIADETAGADMLYSSGTTGR 154 (502)
T ss_pred EccchhhHHHHHhhhccccccEEEEeCC---------CCCccccHHHHHhcCC-----CCCCCCCCcceEEEECCCCCCC
Confidence 998776655332 1222222211 1112223444432211 1112355678999999999999
Q ss_pred CchhhhccHHHHHHhh----HHhhhhhhcCCCCcEEEEecchhhHHhHHHHHHHHhhCCceEEEcCCCCHHHHHHHHHhc
Q 043601 206 GKGAILTHKNFIASSL----MTAMDQELAGALDYVTLCVLPMFHVFGLSFVVYAQLQKGNCVVSMRKFDLETALRAIEKY 281 (488)
Q Consensus 206 pK~v~~t~~~l~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~ 281 (488)
||+|+++|.++..... ............++++++..|++|..++ ...+.++..|+++++.+.+++..+++.++++
T Consensus 155 PK~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~ 233 (502)
T PRK08276 155 PKGIKRPLPGLDPDEAPGMMLALLGFGMYGGPDSVYLSPAPLYHTAPL-RFGMSALALGGTVVVMEKFDAEEALALIERY 233 (502)
T ss_pred CceEEEccCCcchhhhhHHhhhhhhhcccCCCCCEEEEcCcHHHHHHH-HHHHHHHhccceEEEcCCCCHHHHHHHHHHh
Confidence 9999998876553211 1111111212467889999999999988 4555789999999999889999999999999
Q ss_pred CccEEEecHHHHHHHHhcCCc-cCCCCCCCccEEEEccCCCcHHHHHHHHhhCCCCeEEeccCcccccccccccCCCCCC
Q 043601 282 RVTHWWVVPPIILALAKNVSL-VKKFDLSSLKGIGSGAAPLRKELVEECSKNLPTVTVFQGYGMTETCGVVTVENPLLGV 360 (488)
Q Consensus 282 ~~t~l~~~p~~~~~l~~~~~~-~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~i~~~YG~tE~~~~~~~~~~~~~~ 360 (488)
++|++.++|+++..+++.... ....+++++|.++++|++++.++.+.+.+.++ ..+++.||+||++.++...... ..
T Consensus 234 ~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~~g~~~~~~~~~~~~~~~~-~~~~~~yG~tE~~~~~~~~~~~-~~ 311 (502)
T PRK08276 234 RVTHSQLVPTMFVRMLKLPEEVRARYDVSSLRVAIHAAAPCPVEVKRAMIDWWG-PIIHEYYASSEGGGVTVITSED-WL 311 (502)
T ss_pred CCeEEEehHHHHHHHHhCccccCCCCCcccceEEEecCCCCCHHHHHHHHHHhC-cHhhhhcccccccceeEecCcc-cc
Confidence 999999999999999876211 23456889999999999999999999999886 8899999999998755543322 23
Q ss_pred CCCCceeecCCCceEEEEeCCCCCCCCCCCcceEEEec---------------------CCccccceEEEccCCcEEEEc
Q 043601 361 QNSGSTGTLVAGVEAQIVCVDTLKPLPPNQVGELWVRG---------------------PILMPGDLGYFDEHGQLFIVD 419 (488)
Q Consensus 361 ~~~~~~g~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g---------------------~~~~tGD~~~~~~~g~l~~~G 419 (488)
...+++|+|+ ++.++++| +++++++.|+.|||+++| .|+.|||+++++++|.+++.|
T Consensus 312 ~~~~~~G~~~-~~~~~i~d-~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~~~~~G 389 (502)
T PRK08276 312 AHPGSVGKAV-LGEVRILD-EDGNELPPGEIGTVYFEMDGYPFEYHNDPEKTAAARNPHGWVTVGDVGYLDEDGYLYLTD 389 (502)
T ss_pred ccCCCcceec-ccEEEEEC-CCCCCCcCCCceEEEEECCCccchhcCCHHHHHHHhcCCCceeecceEEEcCCcCEEEec
Confidence 4557899999 88999999 578999999999999995 378899999999999999999
Q ss_pred ccCcceeeCcEEe---eHhHHHhcCCCeeeeEEEeecCCCCCceEEEEEEeCCCCCCCH---HHHHHHHHhhcC
Q 043601 420 RIKELIKCNGFQV---ELEGVLVSHPEILDAVVIPFPDPEAGEVPIAYVVRSPNSSLTK---EDVQKFVANDSQ 487 (488)
Q Consensus 420 R~~d~i~~~G~~v---~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~---~~i~~~~~~~l~ 487 (488)
|++|+++.+|.+| +||.++.++|+|.+++|++.+++..++.++++|+++++...+. ++++++++++|+
T Consensus 390 R~~~~i~~~G~~v~~~~iE~~i~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~i~~~~~~~l~ 463 (502)
T PRK08276 390 RKSDMIISGGVNIYPQEIENLLVTHPKVADVAVFGVPDEEMGERVKAVVQPADGADAGDALAAELIAWLRGRLA 463 (502)
T ss_pred cCcceEEeCCEEeCHHHHHHHHHhCCCcceEEEEeCCCcccCceEEEEEEECCCCCCChhhHHHHHHHHHhhcc
Confidence 9999999999999 9999999999999999999999888999999999987644343 478888888875
No 110
>PRK08308 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.5e-52 Score=412.82 Aligned_cols=374 Identities=20% Similarity=0.230 Sum_probs=322.6
Q ss_pred EEeCCCCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHHcCCeEeecCCCCCHHHHHHHHhhc
Q 043601 46 LIDADSGESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQFPICLLGVIAIGGIATTANPVYTVSELSKQVKDS 125 (488)
Q Consensus 46 ~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~ 125 (488)
+++. ++++||+||.++++++|++|. .|+++|++|+++++|++++++++||++++|++++|+++..+.+.+..+++.+
T Consensus 2 ~~~~--~~~~ty~el~~~~~~~a~~l~-~~~~~g~~V~i~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~~~~~~~~~ 78 (414)
T PRK08308 2 LIVN--DEEYSKSDFDLRLQRYEEMEQ-FQEAAGNRFAVCLKDPFDIITLVFFLKEKGASVLPIHPDTPKEAAIRMAKRA 78 (414)
T ss_pred eEec--CceecHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCChHHHHHHHHHHHCCeEEEecCCCCCHHHHHHHHHhC
Confidence 5555 689999999999999999985 6899999999999999999999999999999999999999999999999999
Q ss_pred CCeEEEEccccHHHHhccCCCeEEEcccCcccCCCCcCCCCccchHHHHhhcCCCCCCCCCCCCCCCEEEEEcccCCCCC
Q 043601 126 SPKLVVTVPELWERVKDFNIPAVLLGSNHIVSPRGLRSSSNIVYFDELIELSGNASNFPDVSVKQTDTAALLYSSGTTGV 205 (488)
Q Consensus 126 ~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~ 205 (488)
+++.+++++.... . . . .....++++++++|||||||.
T Consensus 79 ~~~~~i~~~~~~~-----------~-----------~------~---------------~~~~~~~~~~~i~~TSGtTG~ 115 (414)
T PRK08308 79 GCHGLLYGESDFT-----------K-----------L------E---------------AVNYLAEEPSLLQYSSGTTGE 115 (414)
T ss_pred CCCEEEecCcccc-----------c-----------c------c---------------CCCCCCCCceEEEECCCCCCC
Confidence 9999998753100 0 0 0 012346789999999999999
Q ss_pred CchhhhccHHHHHHhhHHhhhhhhcCCCCcEEEEecchhhHHhHHHHHHHHhhCCceEEEcCCCCHHHHHHHHHhcCccE
Q 043601 206 GKGAILTHKNFIASSLMTAMDQELAGALDYVTLCVLPMFHVFGLSFVVYAQLQKGNCVVSMRKFDLETALRAIEKYRVTH 285 (488)
Q Consensus 206 pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~ 285 (488)
||+|++||+++.++ .......+....+++.+...|++|.+++...++.++..|+++++.+..++..+++.+++++++.
T Consensus 116 PKgv~~s~~~l~~~--~~~~~~~~~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~ 193 (414)
T PRK08308 116 PKLIRRSWTEIDRE--IEAYNEALNCEQDETPIVACPVTHSYGLICGVLAALTRGSKPVIITNKNPKFALNILRNTPQHI 193 (414)
T ss_pred CcEEEEehHhHHHH--HHHHHHhhCCCcccEEEEecCcHHHHHHHHHHHHHHHcCCEEEecCCCCHHHHHHHHHHhCCeE
Confidence 99999999999876 3334455666788899999999999998788899999999999998889999999999999999
Q ss_pred EEecHHHHHHHHhcCCccCCCCCCCccEEEEccCCCcHHHHHHHHhhCCCCeEEeccCcccccccccccCCCCCCCCCCc
Q 043601 286 WWVVPPIILALAKNVSLVKKFDLSSLKGIGSGAAPLRKELVEECSKNLPTVTVFQGYGMTETCGVVTVENPLLGVQNSGS 365 (488)
Q Consensus 286 l~~~p~~~~~l~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~ 365 (488)
++++|+.+..+.+.. .. ..+++.++++|+++++++.++|++. ..++++.||+||++.+.... . .....+
T Consensus 194 ~~~~P~~~~~l~~~~-~~----~~~l~~~~~~G~~l~~~~~~~~~~~--~~~~~~~YG~tE~~~~~~~~-~---~~~~~~ 262 (414)
T PRK08308 194 LYAVPLMLHILGRLL-PG----TFQFHAVMTSGTPLPEAWFYKLRER--TTYMMQQYGCSEAGCVSICP-D---MKSHLD 262 (414)
T ss_pred EEcCHHHHHHHHhcC-Cc----cccccEEEEccCCCCHHHHHHHHHh--CChhhhccCccccCCeeecC-C---CCCCCc
Confidence 999999999998762 11 2368889999999999999999987 36899999999998544321 1 234567
Q ss_pred eeecCCCceEEEEeCCCCCCCCCCCcceEEEec--CCccccceEEEccCCcEEEEcccCcceeeCcEEe---eHhHHHhc
Q 043601 366 TGTLVAGVEAQIVCVDTLKPLPPNQVGELWVRG--PILMPGDLGYFDEHGQLFIVDRIKELIKCNGFQV---ELEGVLVS 440 (488)
Q Consensus 366 ~g~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g--~~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v---~ie~~l~~ 440 (488)
+|+|+|++.+++.+. .++.||+++++ .||+|||+|++++||++++.||.+|+||++|++| +||+++.+
T Consensus 263 ~G~p~~~~~~~~~~~-------~~~~gel~v~~~~~~~~TGDl~~~~~dg~l~~~GR~~~~ik~~G~~v~p~eIE~~l~~ 335 (414)
T PRK08308 263 LGNPLPHVSVSAGSD-------ENAPEEIVVKMGDKEIFTKDLGYKSERGTLHFMGRMDDVINVSGLNVYPIEVEDVMLR 335 (414)
T ss_pred cCccCCCeEEEEecC-------CCCCceEEEEcCCceEECCceEEECCCccEEEecccCCeEEECCEEECHHHHHHHHHh
Confidence 999999999998752 36679999986 4899999999999999999999999999999999 99999999
Q ss_pred CCCeeeeEEEeecCCCCCceEEEEEEeCCCCCCCHHHHHHHHHhhcC
Q 043601 441 HPEILDAVVIPFPDPEAGEVPIAYVVRSPNSSLTKEDVQKFVANDSQ 487 (488)
Q Consensus 441 ~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~~~~~~l~ 487 (488)
+|+|.+++|++.+++..++.++++++.++ ..+.++++++++++|+
T Consensus 336 ~~~v~~a~v~~~~~~~~~~~~~~~v~~~~--~~~~~~l~~~l~~~l~ 380 (414)
T PRK08308 336 LPGVQEAVVYRGKDPVAGERVKAKVISHE--EIDPVQLREWCIQHLA 380 (414)
T ss_pred CCCeeEEEEEeccCCCCCceEEEEEEeCC--CCCHHHHHHHHHHhCc
Confidence 99999999999999888899999988764 4678999999999885
No 111
>PLN03051 acyl-activating enzyme; Provisional
Probab=100.00 E-value=8.1e-53 Score=424.12 Aligned_cols=393 Identities=17% Similarity=0.182 Sum_probs=302.6
Q ss_pred cCCCcchHHHHHHHHHcCCeEeecCCCCCHHHHHHHHhhcCCeEEEEccccH------HHHhcc----CCCeEEEcccCc
Q 043601 86 APNSIQFPICLLGVIAIGGIATTANPVYTVSELSKQVKDSSPKLVVTVPELW------ERVKDF----NIPAVLLGSNHI 155 (488)
Q Consensus 86 ~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~------~~~~~~----~~~~~~~~~~~~ 155 (488)
++|++++++++|||+++|++++|+++.++.+++.++++.++++++|+++... ..+... ....+.+.....
T Consensus 1 ~~n~~e~~~~~lA~~~~Gav~vpl~~~~~~~el~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 80 (499)
T PLN03051 1 MPMTVDAVIIYLAIVLAGCVVVSVADSFSAKEIATRLDISGAKGVFTQDVVLRGGRALPLYSKVVEAAPAKAIVLPAAGE 80 (499)
T ss_pred CCCcHHHHHHHHHHHHcCCEEEeeCCCCCHHHHHHHHHhcCceEEEecCceeeCCeeecchhhhhhcccceEEEEeccCc
Confidence 5899999999999999999999999999999999999999999999986421 111111 111222211100
Q ss_pred ccCCCCcCCCCccchHHHHhhcCCC-----CCCCCCCCCCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHhhhhhhc
Q 043601 156 VSPRGLRSSSNIVYFDELIELSGNA-----SNFPDVSVKQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTAMDQELA 230 (488)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~ 230 (488)
.. .........++++++...... .........++++++|+|||||||.||+|++||.++..... .....+.
T Consensus 81 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~sh~~~~~~~~--~~~~~~~ 156 (499)
T PLN03051 81 PV--AVPLREQDLSWCDFLGVAAAQGSVGGNEYSPVYAPVESVTNILFSSGTTGEPKAIPWTHLSPLRCAS--DGWAHMD 156 (499)
T ss_pred cc--CCccccCcccHHHHHhhhccccccccccCCcccCCccceEEEEeCCCCCCCCceEEEccchHHHHHH--HHHHhcC
Confidence 00 000001122455554221100 01111123568999999999999999999999999876532 2333455
Q ss_pred CCCCcEEEEecchhhHHhHHHHHHHHhhCCceEEEcCC-CCHHHHHHHHHhcCccEEEecHHHHHHHHhcCCc--cCCCC
Q 043601 231 GALDYVTLCVLPMFHVFGLSFVVYAQLQKGNCVVSMRK-FDLETALRAIEKYRVTHWWVVPPIILALAKNVSL--VKKFD 307 (488)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~--~~~~~ 307 (488)
..++|++++.+|++|..++ ..++.++..|+++++.+. +++..+++.|+++++|++.++|+++..|++. .. ....+
T Consensus 157 ~~~~d~~l~~~pl~h~~g~-~~~~~~l~~G~t~v~~~~~~~~~~~~~~i~~~~vt~~~~vP~~~~~l~~~-~~~~~~~~~ 234 (499)
T PLN03051 157 IQPGDVVCWPTNLGWMMGP-WLLYSAFLNGATLALYGGAPLGRGFGKFVQDAGVTVLGLVPSIVKAWRHT-GAFAMEGLD 234 (499)
T ss_pred CCCCCEEEEccCcceeeeh-HHHHHHHHcCCEEEecCCCCCcHHHHHHHHHhCCcEEEeCHHHHHHHHhc-CccccccCC
Confidence 6788999999999999987 578889999999998864 6889999999999999999999999998875 22 23457
Q ss_pred CCCccEEEEccCCCcHHHHHHHHhhCC-CCeEEeccCcccccccccccCCCCCCCCCCceeecCCCceEEEEeCCCCCCC
Q 043601 308 LSSLKGIGSGAAPLRKELVEECSKNLP-TVTVFQGYGMTETCGVVTVENPLLGVQNSGSTGTLVAGVEAQIVCVDTLKPL 386 (488)
Q Consensus 308 l~~lr~v~~~G~~l~~~~~~~~~~~~~-~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d~~~~~~~ 386 (488)
+++||.+++||+++++++.+++.+.++ +..+++.||+||++..+...... .....+++|+|.++++++|+| ++++++
T Consensus 235 ~~~Lr~i~~gG~~~~~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~-~~~~~~~~G~p~~~~~~~ivd-~~g~~~ 312 (499)
T PLN03051 235 WSKLRVFASTGEASAVDDVLWLSSVRGYYKPVIEYCGGTELASGYISSTLL-QPQAPGAFSTASLGTRFVLLN-DNGVPY 312 (499)
T ss_pred chhheEEEecCCCCCHHHHHHHHHhccccceeEeeeccccccceeeccccc-CCCCCccccCCCCCceEEEEC-CCCCCC
Confidence 889999999999999999988777332 27899999999987543322221 123457899999999999999 688999
Q ss_pred CCC--CcceEEEecC------------------------------CccccceEEEccCCcEEEEcccCcceeeCcEEe--
Q 043601 387 PPN--QVGELWVRGP------------------------------ILMPGDLGYFDEHGQLFIVDRIKELIKCNGFQV-- 432 (488)
Q Consensus 387 ~~g--~~Gel~v~g~------------------------------~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v-- 432 (488)
+.| +.|||+++|+ |++|||+|++|+||++++.||+||+||.+|++|
T Consensus 313 ~~g~~~~Gel~v~g~~~~~~~gy~~~~~~~~~~~g~~~~~~~~~~~~~TGDlg~~d~dG~l~~~gR~~d~ik~~G~~v~p 392 (499)
T PLN03051 313 PDDQPCVGEVALAPPMLGASDRLLNADHDKVYYKGMPMYGSKGMPLRRHGDIMKRTPGGYFCVQGRADDTMNLGGIKTSS 392 (499)
T ss_pred CCCCCcceEEEEecCcCCCCccccCCcccceeeecCCccccCCcceeecCCeEEECCCCcEEEEeccCCEEeeCCEECCH
Confidence 988 4799999875 269999999999999999999999999999999
Q ss_pred -eHhHHHhc-CCCeeeeEEEeecCCCCC-ceEEEEE---EeCCCC-CCCHHHHHHHHHhhc
Q 043601 433 -ELEGVLVS-HPEILDAVVIPFPDPEAG-EVPIAYV---VRSPNS-SLTKEDVQKFVANDS 486 (488)
Q Consensus 433 -~ie~~l~~-~~~v~~~~v~~~~~~~~~-~~~~~~v---~~~~~~-~~~~~~i~~~~~~~l 486 (488)
|||++|.+ ||.|.+++|++.+++.++ +.++++| +++++. ..+.++++++|+++|
T Consensus 393 ~EIE~~l~~~~p~V~~aavvg~~d~~~g~~~~~a~v~~~v~~~~~~~~~~~~l~~~~~~~l 453 (499)
T PLN03051 393 VEIERACDRAVAGIAETAAVGVAPPDGGPELLVIFLVLGEEKKGFDQARPEALQKKFQEAI 453 (499)
T ss_pred HHHHHHHHhcCCCcceEEEEEecCCCCCceEEEEEEEcceecccccccchHHHHHHHHHHH
Confidence 99999986 999999999999998888 6889998 777764 467788888876543
No 112
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=1.5e-52 Score=418.66 Aligned_cols=394 Identities=23% Similarity=0.331 Sum_probs=327.7
Q ss_pred CHHHHH-hhccccCCCceEEEeCCCCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHHcCCeE
Q 043601 28 SMVHFL-FRNSASYGSKSALIDADSGESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQFPICLLGVIAIGGIA 106 (488)
Q Consensus 28 ~l~~~l-~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~ 106 (488)
++.+.+ .+.++.+|+++|+++. ++.+||+||.++++++|..|.+.|+++|++|+++++|++++++++|||+++|+++
T Consensus 3 ~~~~~~~~~~a~~~~~~~a~~~~--~~~~ty~el~~~~~~~a~~L~~~g~~~~~~v~l~~~~~~~~~~~~la~~~~G~~~ 80 (458)
T PRK09029 3 IFSDWPWRHWAQVRPQAIALRLN--DEVLTWQQLCARIDQLAAGFAQQGVVEGSGVALRGKNSPETLLAYLALLQCGARV 80 (458)
T ss_pred hhhcChHHHHHHhCCCceeeecC--CcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHHHHHHHHHHcCCEE
Confidence 344444 4558899999999876 7899999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCHHHHHHHHhhcCCeEEEEccccHHHHhccCCCeEEEcccCcccCCCCcCCCCccchHHHHhhcCCCCCCCCC
Q 043601 107 TTANPVYTVSELSKQVKDSSPKLVVTVPELWERVKDFNIPAVLLGSNHIVSPRGLRSSSNIVYFDELIELSGNASNFPDV 186 (488)
Q Consensus 107 v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (488)
+|+++..+.+++..+++.+++++++++++... .... ... ... .. ......
T Consensus 81 v~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~--~~~--------------------~~~-----~~--~~~~~~ 130 (458)
T PRK09029 81 LPLNPQLPQPLLEELLPSLTLDFALVLEGENT-FSAL--TSL--------------------HLQ-----LV--EGAHAV 130 (458)
T ss_pred eecCCCCCHHHHHHHHHhcCCCEEEEcCcccc-hhhc--ccc--------------------ccc-----cc--cccCcc
Confidence 99999999999999999999999999876522 1100 000 000 00 011123
Q ss_pred CCCCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHhhhhhhcCCCCcEEEEecchhhHHhHHHHHHHHhhCCceEEEc
Q 043601 187 SVKQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTAMDQELAGALDYVTLCVLPMFHVFGLSFVVYAQLQKGNCVVSM 266 (488)
Q Consensus 187 ~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~ 266 (488)
...++++++++|||||||.||+|.+||+++... .......+...+++.++...|++|.+++ ..++.++..|+++++.
T Consensus 131 ~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~--~~~~~~~~~~~~~~~~l~~~p~~h~~g~-~~~~~~l~~G~~v~~~ 207 (458)
T PRK09029 131 AWQPQRLATMTLTSGSTGLPKAAVHTAQAHLAS--AEGVLSLMPFTAQDSWLLSLPLFHVSGQ-GIVWRWLYAGATLVVR 207 (458)
T ss_pred cCCCCCeEEEEECCCCCCCCCEEEEeHHHHHHH--HHHHhhcCCCCccceEEEecCcHhhhhh-HHHHHHHhCCceEEeC
Confidence 446789999999999999999999999999887 3334455667788999999999999998 5677889999999987
Q ss_pred CCCCHHHHHHHHHhcCccEEEecHHHHHHHHhcCCccCCCCCCCccEEEEccCCCcHHHHHHHHhhCCCCeEEeccCccc
Q 043601 267 RKFDLETALRAIEKYRVTHWWVVPPIILALAKNVSLVKKFDLSSLKGIGSGAAPLRKELVEECSKNLPTVTVFQGYGMTE 346 (488)
Q Consensus 267 ~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~i~~~YG~tE 346 (488)
+. ..+++.+. +++.+..+|+++..++.. ... ..++|.+++||+++++.+.+.+.+. +.++++.||+||
T Consensus 208 ~~---~~~~~~i~--~~t~~~~~P~~~~~l~~~-~~~----~~~l~~i~~gG~~~~~~~~~~~~~~--g~~~~~~YG~tE 275 (458)
T PRK09029 208 DK---QPLEQALA--GCTHASLVPTQLWRLLDN-RSE----PLSLKAVLLGGAAIPVELTEQAEQQ--GIRCWCGYGLTE 275 (458)
T ss_pred Ch---HHHHHHHh--hceeeecChHHHHHHHhc-ccc----CCcceEEEECCCCCCHHHHHHHHHc--CCcEeccccccc
Confidence 65 55666663 789999999999998875 221 4479999999999999999999865 489999999999
Q ss_pred ccccccccCCCCCCCCCCceeecCCCceEEEEeCCCCCCCCCCCcceEEEecC--------------------Cccccce
Q 043601 347 TCGVVTVENPLLGVQNSGSTGTLVAGVEAQIVCVDTLKPLPPNQVGELWVRGP--------------------ILMPGDL 406 (488)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~--------------------~~~tGD~ 406 (488)
++...+.... ....++|+|++++.+++++ |||+++|+ |++|||+
T Consensus 276 ~~~~~~~~~~----~~~~~~G~~~~~~~~~i~~------------gel~v~g~~~~~gY~~~~~~~~~~~~~~~~~TGD~ 339 (458)
T PRK09029 276 MASTVCAKRA----DGLAGVGSPLPGREVKLVD------------GEIWLRGASLALGYWRQGQLVPLVNDEGWFATRDR 339 (458)
T ss_pred cCcceeccCC----CCCCCCCCCCCCCEEEEeC------------CEEEEecCceeeeeecCccccccccCCCccCCCCc
Confidence 9865543322 2235699999999999976 67777663 7899999
Q ss_pred EEEccCCcEEEEcccCcceeeCcEEe---eHhHHHhcCCCeeeeEEEeecCCCCCceEEEEEEeCCCCCCCHHHHHHHHH
Q 043601 407 GYFDEHGQLFIVDRIKELIKCNGFQV---ELEGVLVSHPEILDAVVIPFPDPEAGEVPIAYVVRSPNSSLTKEDVQKFVA 483 (488)
Q Consensus 407 ~~~~~~g~l~~~GR~~d~i~~~G~~v---~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~~~~ 483 (488)
|+++ ||.+++.||++|+||++|.+| +||+++.++|+|.+++|++.+++..++.++++|+.+. ..+.++++++|+
T Consensus 340 ~~~~-~g~l~~~gR~~d~i~~~G~~v~p~eiE~~l~~~~~v~~~~v~~~~~~~~~~~~~a~v~~~~--~~~~~~l~~~~~ 416 (458)
T PRK09029 340 GEWQ-NGELTILGRLDNLFFSGGEGIQPEEIERVINQHPLVQQVFVVPVADAEFGQRPVAVVESDS--EAAVVNLAEWLQ 416 (458)
T ss_pred EEEe-CCEEEEecccccceeeCCEEeCHHHHHHHHhcCCCcceEEEEccCCcccCceEEEEEEcCc--ccCHHHHHHHHH
Confidence 9998 999999999999999999999 9999999999999999999999988999999998763 357889999999
Q ss_pred hhcC
Q 043601 484 NDSQ 487 (488)
Q Consensus 484 ~~l~ 487 (488)
++|+
T Consensus 417 ~~l~ 420 (458)
T PRK09029 417 DKLA 420 (458)
T ss_pred hhch
Confidence 9886
No 113
>KOG1179 consensus Very long-chain acyl-CoA synthetase/fatty acid transporter [Lipid transport and metabolism]
Probab=100.00 E-value=4.2e-52 Score=386.42 Aligned_cols=453 Identities=21% Similarity=0.260 Sum_probs=362.9
Q ss_pred CCCCHHHHHhhccccCCCceEEEeCCCCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHHcCC
Q 043601 25 PNLSMVHFLFRNSASYGSKSALIDADSGESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQFPICLLGVIAIGG 104 (488)
Q Consensus 25 ~~~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~ 104 (488)
++.|+.+++..+++++|+|+|+++.+..+++||+|+++.++++|+.|...|++.||.||++|+|.++|+..+|+++++|+
T Consensus 75 ~~~ti~~~F~~~vrr~p~k~aii~~~~~~~~Tf~e~~~~s~~~A~~~~~~~l~~GD~VAL~men~pefv~lWlGLaKlGv 154 (649)
T KOG1179|consen 75 ERRTIAELFLSQVRRQPDKPAIIYEGPFQSLTFAELDARSNRVANYLHAEGLKAGDVVALLMENRPEFVALWLGLAKLGV 154 (649)
T ss_pred cCCcHHHHHHHHHHhCCCccEEEEeCCCceeeHHHHHHHHHHHHHHHHHhhcccCCEEEEecCCChhHHHHHHhHHhhCc
Confidence 45899999999999999999999986568999999999999999999999999999999999999999999999999999
Q ss_pred eEeecCCCCCHHHHHHHHhhcCCeEEEEccccHHHHhccCCCeEEEcccCcccCCCCcCCCCccchHHHHhhcCCCC-C-
Q 043601 105 IATTANPVYTVSELSKQVKDSSPKLVVTVPELWERVKDFNIPAVLLGSNHIVSPRGLRSSSNIVYFDELIELSGNAS-N- 182 (488)
Q Consensus 105 ~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~- 182 (488)
+...||++...+-+.+.++.++++++|++.+....+.+.. +......-............++.++.+.+......+ +
T Consensus 155 ~tA~iNtNlR~~~LlHsi~~s~aralv~~~el~~~~~e~~-~~l~~~~i~~~~~~~~~~~~g~~~L~~~l~~~~~~~vp~ 233 (649)
T KOG1179|consen 155 ITAFINTNLRGEPLLHSITVSGARALVVGPELLNALEEIL-PLLIKNGIHVFSLGPTSVPDGIESLLAKLSAAPKHPVPV 233 (649)
T ss_pred eeeeeccccccchhhhhhhhcCceEEEECHHHHHHHHhcc-hhhhhccceEEecCCCCCCchHHHHHHhhcccccCCCCc
Confidence 9999999999999999999999999999998877665551 111000000011111122233334444443333211 1
Q ss_pred CCCCCCCCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHhhhhhhcCCCCcEEEEecchhhHHhHHHHHHHHhhCCce
Q 043601 183 FPDVSVKQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTAMDQELAGALDYVTLCVLPMFHVFGLSFVVYAQLQKGNC 262 (488)
Q Consensus 183 ~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~ 262 (488)
.........++++++|||||||.||+.++||......+.. ....+++..+|+++..+|++|+.+.+.++..++..|+|
T Consensus 234 ~~~~~~~~~s~~lyIYTSGTTGLPKaAvith~r~~~~a~g--~~~~~g~~~~DvvY~~lPLYHsaa~ilGi~~~l~~GaT 311 (649)
T KOG1179|consen 234 STRSGLTFRSPLLYIYTSGTTGLPKAAVITHLRYLQGAAG--FYYVFGMTADDVVYTTLPLYHSAAGILGIGGCLLHGAT 311 (649)
T ss_pred ccCCCccccceeEEEEcCCCCCCCHHHHHHHHHHHHHHHH--HHHHhCCCccceEEEcchhHHHHHHHHHHHHHHhcCce
Confidence 2234567788999999999999999999999988776432 55667789999999999999999999999999999999
Q ss_pred EEEcCCCCHHHHHHHHHhcCccEEEecHHHHHHHHhcCCccCCCCCCCccEEEEccCCCcHHHHHHHHhhCCCCeEEecc
Q 043601 263 VVSMRKFDLETALRAIEKYRVTHWWVVPPIILALAKNVSLVKKFDLSSLKGIGSGAAPLRKELVEECSKNLPTVTVFQGY 342 (488)
Q Consensus 263 ~~~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~i~~~Y 342 (488)
+++-.++++.++|+...++++|+..-.-.+.+.|+.. +..+...-.++|.++-.| +.++.++.|.++|+..++.+.|
T Consensus 312 ~VlrkKFSAS~FW~DC~k~~~Tv~QYIGElcRYLl~~-p~~~~er~HkVRla~GNG--LR~diW~~Fv~RFg~~~IgE~Y 388 (649)
T KOG1179|consen 312 VVLRKKFSASNFWDDCRKYNVTVIQYIGELCRYLLNQ-PPSPEERQHKVRLAYGNG--LRPDIWQQFVKRFGIIKIGEFY 388 (649)
T ss_pred EEEecccchhhhHHHHHHhCCeeeehHHHHHHHHHcC-CCChhhcCceEEEEecCC--CCchHHHHHHHHcCCCeEEEEe
Confidence 9999999999999999999999999999999999988 555666667788666444 9999999999999988899999
Q ss_pred CcccccccccccCCCCCCCCCCcee------ecCCCceEEEEeCCCCC----------CCCCCCcceEEEe----cC---
Q 043601 343 GMTETCGVVTVENPLLGVQNSGSTG------TLVAGVEAQIVCVDTLK----------PLPPNQVGELWVR----GP--- 399 (488)
Q Consensus 343 G~tE~~~~~~~~~~~~~~~~~~~~g------~~~~~~~~~i~d~~~~~----------~~~~g~~Gel~v~----g~--- 399 (488)
|+||...-.. +. +...+.+| +.+--+++--+|+++++ +|++||+|.++-+ .|
T Consensus 389 gaTEgn~~~~-N~----d~~vGA~G~~~~~~~~l~p~~LIk~D~~t~E~iRd~~G~Ci~~~~GEpGlLv~~i~~k~P~~~ 463 (649)
T KOG1179|consen 389 GATEGNSNLV-NY----DGRVGACGFMSRLLKLLYPFRLIKVDPETGEPIRDSQGLCIPCPPGEPGLLVGKIVQKNPLRS 463 (649)
T ss_pred ccccCcceee-ee----cCccccccchhhhhhhccceEEEEecCCCCceeecCCceEEECCCCCCceEEEEeccCCchhh
Confidence 9999864332 22 12222222 22223344445656665 4578899966542 11
Q ss_pred -------------------------CccccceEEEccCCcEEEEcccCcceeeCcEEe---eHhHHHhcCCCeeeeEEEe
Q 043601 400 -------------------------ILMPGDLGYFDEHGQLFIVDRIKELIKCNGFQV---ELEGVLVSHPEILDAVVIP 451 (488)
Q Consensus 400 -------------------------~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v---~ie~~l~~~~~v~~~~v~~ 451 (488)
++.|||+-.+|+.|++||.+|..|.+...|++| |+|+++.....++|+.|++
T Consensus 464 F~GY~g~~~~t~kKl~rDVFkkGD~~f~tGDlLv~D~~GylYF~DRtGDTFRWKGENVsTtEVe~~l~~~~~~~dv~VYG 543 (649)
T KOG1179|consen 464 FLGYAGPKKATEKKLLRDVFKKGDVYFNTGDLLVADELGYLYFKDRTGDTFRWKGENVSTTEVEDVLSALDFLQDVNVYG 543 (649)
T ss_pred hccccCchhhhhhhhHHhhhccCcEEEeeCcEEEEecCCcEEEeccCCCceeecCCcccHHHHHHHHhhhccccceeEEE
Confidence 577799999999999999999999999999999 9999999999999999999
Q ss_pred ecCCC-CCceEEEEEEeCCCCCCCHHHHHHHHHhhcCC
Q 043601 452 FPDPE-AGEVPIAYVVRSPNSSLTKEDVQKFVANDSQL 488 (488)
Q Consensus 452 ~~~~~-~~~~~~~~v~~~~~~~~~~~~i~~~~~~~l~~ 488 (488)
+.-+. .|..-.|.|+.+|+.+.+.+.+-.++++.||.
T Consensus 544 V~VP~~EGRaGMAaI~~~p~~~~d~~~l~~~l~~~LP~ 581 (649)
T KOG1179|consen 544 VTVPGYEGRAGMAAIVLDPTTEKDLEKLYQHLRENLPS 581 (649)
T ss_pred EecCCccCccceEEEEecCcccchHHHHHHHHHhhCcc
Confidence 86555 44556788888999999999999999999873
No 114
>PRK05850 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.7e-52 Score=430.39 Aligned_cols=426 Identities=24% Similarity=0.341 Sum_probs=323.7
Q ss_pred CCHHHHHhhccccCCCceEEEeCC-------CCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHH
Q 043601 27 LSMVHFLFRNSASYGSKSALIDAD-------SGESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQFPICLLGV 99 (488)
Q Consensus 27 ~~l~~~l~~~a~~~p~~~a~~~~~-------~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~ 99 (488)
|++.++|.+++..+|+++|+++.+ ..+.+||.||.++++++|++|.+.| ++||+|+++++|++++++++|||
T Consensus 1 ~s~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~lty~eL~~~v~~~A~~L~~~g-~~gd~V~l~~~n~~~~~~~~lA~ 79 (578)
T PRK05850 1 SSVPSLLRERASLQPDDAAFTFIDYEQDPAGVAETLTWSQLYRRTLNVAEELRRHG-STGDRAVILAPQGLEYIVAFLGA 79 (578)
T ss_pred CcHHHHHHHHHhcCCCceEEEEEccCCCCCCceeeecHHHHHHHHHHHHHHHHHhC-CCCCEEEEEcCCcccHHHHHHHH
Confidence 578899999999999999998642 1268999999999999999999999 68999999999999999999999
Q ss_pred HHcCCeEeecCC---CCCHHHHHHHHhhcCCeEEEEccccHHHHhccCCCeEEEcccCcccCCCCcCCCCccchHHHHhh
Q 043601 100 IAIGGIATTANP---VYTVSELSKQVKDSSPKLVVTVPELWERVKDFNIPAVLLGSNHIVSPRGLRSSSNIVYFDELIEL 176 (488)
Q Consensus 100 ~~~G~~~v~l~~---~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (488)
+++|++++|+++ ..+.+++.++++.+++++++++++....+.......... ....+..++.. ..
T Consensus 80 ~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~-~~ 146 (578)
T PRK05850 80 LQAGLIAVPLSVPQGGAHDERVSAVLRDTSPSVVLTTSAVVDDVTEYVAPQPGQ------------SAPPVIEVDLL-DL 146 (578)
T ss_pred HHcCceEEecCCCCccchHHHHHHHHHhcCCCEEEEcHHHHHHHHHHHhhcccc------------cccceEeeccc-cc
Confidence 999999999997 457889999999999999999987766554320000000 00000000000 00
Q ss_pred cCCCCCCCCCCCCCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHhhhh-hhc-----CCCCcEEEEecchhhHHhHH
Q 043601 177 SGNASNFPDVSVKQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTAMDQ-ELA-----GALDYVTLCVLPMFHVFGLS 250 (488)
Q Consensus 177 ~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~-~~~-----~~~~~~~~~~~~~~~~~~~~ 250 (488)
... ..........+++++|+|||||||.||+|.++|.++.+.... ... .+. ...++++++.+|++|..|+.
T Consensus 147 ~~~-~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~ 223 (578)
T PRK05850 147 DSP-RGSDARPRDLPSTAYLQYTSGSTRTPAGVMVSHRNVIANFEQ--LMSDYFGDTGGVPPPDTTVVSWLPFYHDMGLV 223 (578)
T ss_pred ccC-CccccCCCCCCCeEEEEeCCCCCCCCceEEEeHHHHHHHHHH--HHHhhccccccCCCCcceEEEECCCCCCchhH
Confidence 000 011112345689999999999999999999999999876322 211 111 24578899999999999987
Q ss_pred HHHHHHhhCCceEEEcCCC----CHHHHHHHHHhcCccEEEecHHHHH-HHHhcCC--ccCCCCCCCccEEEEccCCCcH
Q 043601 251 FVVYAQLQKGNCVVSMRKF----DLETALRAIEKYRVTHWWVVPPIIL-ALAKNVS--LVKKFDLSSLKGIGSGAAPLRK 323 (488)
Q Consensus 251 ~~~~~~l~~G~~~~~~~~~----~~~~~~~~l~~~~~t~l~~~p~~~~-~l~~~~~--~~~~~~l~~lr~v~~~G~~l~~ 323 (488)
..++.+++.|+++++.++. ++..+++.+.++++++. .+|+++. .+..... .....+++++|.+++||+++++
T Consensus 224 ~~~~~~l~~G~~~~~~~~~~~~~~p~~~~~~i~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~lr~~~~gg~~~~~ 302 (578)
T PRK05850 224 LGVCAPILGGCPAVLTSPVAFLQRPARWMQLLASNPHAFS-AAPNFAFELAVRKTSDDDMAGLDLGGVLGIISGSERVHP 302 (578)
T ss_pred HHHHHHHhcCCcEEEeCHHHHHHCHHHHHHHHHHcCCeEE-eCCcHHHHHHHHhcchhhhcCcchhhheeEEECcCCCCH
Confidence 7889999999999988642 68999999999999865 5665543 3333211 1123467899999999999999
Q ss_pred HHHHHHHhhCC-----CCeEEeccCcccccccccccCCCCC-----------------------CCCCCceeecCCCceE
Q 043601 324 ELVEECSKNLP-----TVTVFQGYGMTETCGVVTVENPLLG-----------------------VQNSGSTGTLVAGVEA 375 (488)
Q Consensus 324 ~~~~~~~~~~~-----~~~i~~~YG~tE~~~~~~~~~~~~~-----------------------~~~~~~~g~~~~~~~~ 375 (488)
++.++|.+.|+ +..+++.||+||++..+........ .......|.|. +..+
T Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~g~p~-~~~~ 381 (578)
T PRK05850 303 ATLKRFADRFAPFNLRETAIRPSYGLAEATVYVATREPGQPPESVRFDYEKLSAGHAKRCETGGGTPLVSYGSPR-SPTV 381 (578)
T ss_pred HHHHHHHHHHHhcCcCcccccCccchhhhhhheeccCCCCCceEEEECHHHHhCCceEecCCCCCceEEeccCCC-CCEE
Confidence 99999998874 2468999999998754443211100 00011234443 5789
Q ss_pred EEEeCCCCCCCCCCCcceEEEecC--------------------------------CccccceEEEccCCcEEEEcccCc
Q 043601 376 QIVCVDTLKPLPPNQVGELWVRGP--------------------------------ILMPGDLGYFDEHGQLFIVDRIKE 423 (488)
Q Consensus 376 ~i~d~~~~~~~~~g~~Gel~v~g~--------------------------------~~~tGD~~~~~~~g~l~~~GR~~d 423 (488)
+++|++++++++.|+.|||+++|+ |++|||+|+++ +|++++.||++|
T Consensus 382 ~ivd~~~~~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~f~~~~~~~~~~~~~~~w~~TGDl~~~~-~G~l~~~GR~~d 460 (578)
T PRK05850 382 RIVDPDTCIECPAGTVGEIWVHGDNVAAGYWQKPEETERTFGATLVDPSPGTPEGPWLRTGDLGFIS-EGELFIVGRIKD 460 (578)
T ss_pred EEEcCCCCcCCCCCCEEEEEEecCcccccccCChhhhHHHhhcccccccccCCCCCeeeccceeeEE-CCEEEEEccccc
Confidence 999977789999999999999884 78999999997 999999999999
Q ss_pred ceeeCcEEe---eHhHHHhcCCCeeeeEEEeecCCCCCceEEEEEEeCCCCCCC
Q 043601 424 LIKCNGFQV---ELEGVLVSHPEILDAVVIPFPDPEAGEVPIAYVVRSPNSSLT 474 (488)
Q Consensus 424 ~i~~~G~~v---~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~ 474 (488)
+||++|++| +||+++.+|+.+ +++|++.++. .++.++++|+++++...+
T Consensus 461 ~i~~~G~~i~p~eIE~~l~~~~~~-~~~v~~v~~~-~~~~~~a~v~~~~~~~~~ 512 (578)
T PRK05850 461 LLIVDGRNHYPDDIEATIQEITGG-RVAAISVPDD-GTEKLVAIIELKKRGDSD 512 (578)
T ss_pred EEEECCeecCHHHHHHHHHHhcCC-cEEEEEecCC-CceEEEEEEEeccccCcc
Confidence 999999999 999999999985 4778888776 678899999988765433
No 115
>KOG1180 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=3.2e-53 Score=392.13 Aligned_cols=438 Identities=23% Similarity=0.334 Sum_probs=356.5
Q ss_pred CCCCCHHHHHhhccccCCCceEEEeC---------------------CCCcceeHHHHHHHHHHHHHHHHHcCCCCCCE-
Q 043601 24 DPNLSMVHFLFRNSASYGSKSALIDA---------------------DSGESLTFSQFKSIVIKVSHGFRHLGVTKHDV- 81 (488)
Q Consensus 24 ~~~~~l~~~l~~~a~~~p~~~a~~~~---------------------~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~- 81 (488)
+.-.|+.++++++.+++.++.++-.. ....++||.|+.+++.++|++|.+.|++++++
T Consensus 38 ~g~~Tl~~~~~~~~~k~g~~~~mGtR~li~~h~ek~~dGK~f~k~~Lg~Y~w~sy~ev~~~~~~~gsGL~~lG~k~~e~k 117 (678)
T KOG1180|consen 38 PGASTLYELFEECVKKFGKKDAMGTRELIKEHEEKQVDGKTFEKYELGDYKWMSYNEVYERVHNFGSGLVKLGLKPKETK 117 (678)
T ss_pred CCcccHHHHHHHHHHhcCCCccccHHHHHHHHhhccCCCeEEEEEeccceeeecHHHHHHHHHHHHHHHHHhCCCCCCCe
Confidence 34579999999999999999887211 11268999999999999999999999997766
Q ss_pred EEEEcCCCcchHHHHHHHHHcCCeEeecCCCCCHHHHHHHHhhcCCeEEEEccccHHHHhccC-----CCeEEEcc----
Q 043601 82 VLIFAPNSIQFPICLLGVIAIGGIATTANPVYTVSELSKQVKDSSPKLVVTVPELWERVKDFN-----IPAVLLGS---- 152 (488)
Q Consensus 82 V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~-----~~~~~~~~---- 152 (488)
++|+++.+.+|+++++||++.+...|.+..++..+.+.+-+..++++.+||+.+.++++.... .+.++...
T Consensus 118 ~~iFa~TraeWm~ta~gC~~q~ipvVT~Y~TLGeeal~hsl~Et~~~~i~T~~~LL~kl~~~l~~~~~vk~II~~d~id~ 197 (678)
T KOG1180|consen 118 IAIFAETRAEWMITAQGCFSQNIPVVTAYATLGEEALIHSLNETESTAIFTDSELLPKLKAPLKQAKTVKHIIYFDPIDY 197 (678)
T ss_pred EEEEecchHHHHHHHHHHHhcCCeEEEEehhcChhhhhhhhccccceEEEeCHHHHHHHHHHHhccCceeEEEEecCCCC
Confidence 999999999999999999999999999999999999999999999999999999888775542 22232222
Q ss_pred cCcccCCC--CcCCCCccchHHHHhhcCCCCCCCCCCCCCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHhhhhhhc
Q 043601 153 NHIVSPRG--LRSSSNIVYFDELIELSGNASNFPDVSVKQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTAMDQELA 230 (488)
Q Consensus 153 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~ 230 (488)
+...+..+ ......+.++++++..+.... .++....++|+|+|+|||||||.||||+++|+|+.+...... .....
T Consensus 198 ~~~~~~v~~i~~p~i~i~Sf~~v~~lG~~~~-~~~~~P~p~Dia~IMYTSGSTG~PKGVml~H~NiVA~~~G~~-~~v~~ 275 (678)
T KOG1180|consen 198 DAAKDDVNSIVRPDIKIISFDDVEKLGKENE-IPPHPPKPSDIACIMYTSGSTGLPKGVMLTHSNIVAGVTGVG-ENVPE 275 (678)
T ss_pred ccchhhhhhhccCCeEEEEHHHHHhhCCcCC-CCCCCCCCCceEEEEEcCCCCCCCceEEEecccHHhhhhhhc-ccCcc
Confidence 11111111 224467788999998887542 333444789999999999999999999999999998743322 22225
Q ss_pred CCCCcEEEEecchhhHHhHHHHHHHHhhCCceEEEcCCCCHHH--------HHHHHHhcCccEEEecHHHHHHHHhcCCc
Q 043601 231 GALDYVTLCVLPMFHVFGLSFVVYAQLQKGNCVVSMRKFDLET--------ALRAIEKYRVTHWWVVPPIILALAKNVSL 302 (488)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~--------~~~~l~~~~~t~l~~~p~~~~~l~~~~~~ 302 (488)
..+.|+++..+|+.|.+.+ ..-+.+++-|+++-+.++.+..+ ---.+..++||.+.++|..|.++.+....
T Consensus 276 lg~~D~yi~yLPLAHIlEl-~aE~~~ft~G~~iGY~S~~TLtdts~ki~kg~kGD~~~lkPTiM~~VpAV~drVrKgVl~ 354 (678)
T KOG1180|consen 276 LGPKDRYIAYLPLAHILEL-TAELVCFTWGGRIGYSSPLTLTDTSSKIKKGCKGDLTELKPTIMAAVPAVMDRVRKGVLS 354 (678)
T ss_pred cCCCceEEEechHHHHHHH-HHHHHHHhhCCEeecCCcceecccchhhccCCcCccccccchhhhhhHHHHHHHHHHHHH
Confidence 7899999999999999999 55577899999998876533222 22345678999999999999887655300
Q ss_pred -----------------------------------------cCCCCCCCccEEEEccCCCcHHHHHHHHhhCCCCeEEec
Q 043601 303 -----------------------------------------VKKFDLSSLKGIGSGAAPLRKELVEECSKNLPTVTVFQG 341 (488)
Q Consensus 303 -----------------------------------------~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~i~~~ 341 (488)
.....--+||.+++||++++++..+.+.-.+. +++...
T Consensus 355 kV~~~~~~~k~lF~~aY~~K~~~~~~~g~~s~~ld~lVFkKIr~~lGG~lR~~LsGGapLS~dtQrF~nic~C-~Pv~qG 433 (678)
T KOG1180|consen 355 KVNAMPGLQKKLFWTAYERKLSLIERNGPGSPLLDALVFKKIRALLGGNLRYILSGGAPLSPDTQRFMNICFC-CPVLQG 433 (678)
T ss_pred HHhhchHHHHHHHHHHHHHHHHHHhccCCchhhHHHHHHHHHHHHhCCceEEEEeCCCCCCHHHHHHHHHhcc-cccccc
Confidence 00112248999999999999999999988886 899999
Q ss_pred cCcccccccccccCCCCCCCCCCceeecCCCceEEEEeCCCCCCCCCCC--cceEEEecC--------------------
Q 043601 342 YGMTETCGVVTVENPLLGVQNSGSTGTLVAGVEAQIVCVDTLKPLPPNQ--VGELWVRGP-------------------- 399 (488)
Q Consensus 342 YG~tE~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d~~~~~~~~~g~--~Gel~v~g~-------------------- 399 (488)
||.||+++.++...+. +...+.+|.|++.++++++|-+++.--+.+. .||||++|+
T Consensus 434 YGLTEtca~~tv~e~~--d~~~g~vG~pl~c~eiKLvdw~EgGY~~~~~PPrGEI~i~G~~vt~gY~kn~ekT~e~ft~~ 511 (678)
T KOG1180|consen 434 YGLTETCAAATVLEPE--DFSTGRVGAPLPCCEIKLVDWEEGGYFAKNKPPRGEILIGGPNVTMGYYKNEEKTKEDFTVE 511 (678)
T ss_pred ccccchhcccEecChh--hcccccccCCccceEEEEEEhhhcCccCCCCCCCceEEecCCccChhhhCChhhhhhhceec
Confidence 9999999888887766 5677899999999999999987776666555 799999996
Q ss_pred ----CccccceEEEccCCcEEEEcccCcceee-CcEEe---eHhHHHhcCCCeeeeEEEeecCCCCCceEEEEEEeCCC
Q 043601 400 ----ILMPGDLGYFDEHGQLFIVDRIKELIKC-NGFQV---ELEGVLVSHPEILDAVVIPFPDPEAGEVPIAYVVRSPN 470 (488)
Q Consensus 400 ----~~~tGD~~~~~~~g~l~~~GR~~d~i~~-~G~~v---~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~ 470 (488)
|++|||+|++++||.|.+.+|++|.+|. +|+.| -+|.++...|.|...+|++.+... .++++|++..+
T Consensus 512 ~G~~WF~TGDIGe~~pdG~LkIIDRKKdLVKlq~GEYIsL~KvEa~l~s~p~V~NICvyAd~~~s---~~VaiVVPn~~ 587 (678)
T KOG1180|consen 512 DGQRWFRTGDIGEFHPDGCLKIIDRKKDLVKLQNGEYISLGKVEAALRSSPYVDNICVYADSNKS---KPVAIVVPNQK 587 (678)
T ss_pred CCcEEEeccccceecCCCcEEEeechhhhhhhcccceeehHHHHHHHhcCcchhheEEecccccc---eeEEEEcCCch
Confidence 8999999999999999999999999999 99999 889999999999999999876654 89999998754
No 116
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.7e-51 Score=420.20 Aligned_cols=433 Identities=21% Similarity=0.251 Sum_probs=336.2
Q ss_pred CHHHHHhhccccCCCceEEEeCCCCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHHcCCeEe
Q 043601 28 SMVHFLFRNSASYGSKSALIDADSGESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQFPICLLGVIAIGGIAT 107 (488)
Q Consensus 28 ~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v 107 (488)
++.+.|...++.+|+.+++.+.+.++.+||.||+++++++|++|.+.|+++||+|+++++|+++++++++||+++|++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ty~el~~~v~~~a~~L~~~g~~~gd~V~l~~~~~~~~~~~~la~~~~g~v~~ 82 (545)
T PRK07768 3 RFTEKMYANARTSPRGMVTGEPDAPVRHTWGEVHERARRIAGGLAAAGVGPGDAVAVLAGAPVEIAPTAQGLWMRGASLT 82 (545)
T ss_pred hHHHHHHHHhhCCCcceEEecCCCceEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHHHHHHHHHHcCcccc
Confidence 57788889999999999998877678999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCHHH-------HHHHHhhcCCeEEEEccccHHHHhccCCCeEEEcccCcccCCCCcCCCCccchHHHHhhcCCC
Q 043601 108 TANPVYTVSE-------LSKQVKDSSPKLVVTVPELWERVKDFNIPAVLLGSNHIVSPRGLRSSSNIVYFDELIELSGNA 180 (488)
Q Consensus 108 ~l~~~~~~~~-------l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (488)
++++..+.++ +..+++.++++.+++++.....+...... ......++++.....
T Consensus 83 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-----------------~~~~~~~~~l~~~~~-- 143 (545)
T PRK07768 83 MLHQPTPRTDLAVWAEDTLRVIGMIGAKAVVVGEPFLAAAPVLEEK-----------------GIRVLTVADLLAADP-- 143 (545)
T ss_pred ccCCCCCcchhHHHHHHHHHHHHhCCCCEEEecchhhhhhhhhccc-----------------CCceeehhhhcccCC--
Confidence 9998877544 45567888999999987654433221100 011223444433211
Q ss_pred CCCCCCCCCCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHhhhhhhcCCCC-cEEEEecchhhHHhHHHHHHHHhhC
Q 043601 181 SNFPDVSVKQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTAMDQELAGALD-YVTLCVLPMFHVFGLSFVVYAQLQK 259 (488)
Q Consensus 181 ~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~ 259 (488)
.......++++++++|||||||.||+|+++|.++.... ..........++ +++++.+|++|..++...++.++..
T Consensus 144 --~~~~~~~~~~~a~i~~TSGtTG~PKgv~~s~~~~~~~~--~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~ 219 (545)
T PRK07768 144 --IDPVETGEDDLALMQLTSGSTGSPKAVQITHGNLYANA--EAMFVAAEFDVETDVMVSWLPLFHDMGMVGFLTVPMYF 219 (545)
T ss_pred --CCcCCCCCCCEEEEEeCCCCCCCCceEEEcHHHHHHHH--HHHHHhcCCCCCCceeEEeCCCccchHHHHHHHHHHHC
Confidence 12234567899999999999999999999999998763 333444455555 8999999999999987777888999
Q ss_pred CceEEEcCC----CCHHHHHHHHHhcCccEEEecHHHHHHHHhcCCc---cCCCCCCCccEEEEccCCCcHHHHHHHHhh
Q 043601 260 GNCVVSMRK----FDLETALRAIEKYRVTHWWVVPPIILALAKNVSL---VKKFDLSSLKGIGSGAAPLRKELVEECSKN 332 (488)
Q Consensus 260 G~~~~~~~~----~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~---~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~ 332 (488)
|+++++.++ .++..+++.+++++++++.++|..+..+.+.+.. ....+++++|.++++|+++++++.+.+.+.
T Consensus 220 g~~~v~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~ 299 (545)
T PRK07768 220 GAELVKVTPMDFLRDPLLWAELISKYRGTMTAAPNFAYALLARRLRRQAKPGAFDLSSLRFALNGAEPIDPADVEDLLDA 299 (545)
T ss_pred CceEEEeCHHHHHHhHHHHHHHHHHhCCEEEECchHHHHHHHHHHhccccccCCCchheeeEEeccCCCCHHHHHHHHHH
Confidence 999988764 2678889999999999988888777666543211 123678899999999999999999999874
Q ss_pred ---CC--CCeEEeccCcccccccccccCCCC------------------------CCCCCCceeecCCCceEEEEeCCCC
Q 043601 333 ---LP--TVTVFQGYGMTETCGVVTVENPLL------------------------GVQNSGSTGTLVAGVEAQIVCVDTL 383 (488)
Q Consensus 333 ---~~--~~~i~~~YG~tE~~~~~~~~~~~~------------------------~~~~~~~~g~~~~~~~~~i~d~~~~ 383 (488)
++ ...+++.||+||++..+....... ......++|+|++++.++++| +++
T Consensus 300 ~~~~g~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~~-~~~ 378 (545)
T PRK07768 300 GARFGLRPEAILPAYGMAEATLAVSFSPCGAGLVVDEVDADLLAALRRAVPATKGNTRRLATLGPPLPGLEVRVVD-EDG 378 (545)
T ss_pred HHhcCCCcccccccccccccceEEEccCCCCCcceeeechhHhhccCceeccCCCCcceEEeccCCCCCCEEEEEC-CCC
Confidence 43 235999999999986554332110 012345789999999999999 678
Q ss_pred CCCCCCCcceEEEecC--------------------CccccceEEEccCCcEEEEcccCcceeeCcEEe---eHhHHHhc
Q 043601 384 KPLPPNQVGELWVRGP--------------------ILMPGDLGYFDEHGQLFIVDRIKELIKCNGFQV---ELEGVLVS 440 (488)
Q Consensus 384 ~~~~~g~~Gel~v~g~--------------------~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v---~ie~~l~~ 440 (488)
++++.|+.|||+++|+ |++|||+++++++|.+++.||++|+|+++|.+| +||.++.+
T Consensus 379 ~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~eiE~~l~~ 458 (545)
T PRK07768 379 QVLPPRGVGVIELRGESVTPGYLTMDGFIPAQDADGWLDTGDLGYLTEEGEVVVCGRVKDVIIMAGRNIYPTDIERAAAR 458 (545)
T ss_pred CCCCCCCEEEEEEccCcccccccCCCCCcccccCCCeeeccceEEEecCCEEEEEccccceEEECCEecCHHHHHHHHHh
Confidence 9999999999999874 588999999999999999999999999999999 99999999
Q ss_pred CCCeeeeEEEeec--CCCCCceEEEEEEeCCCCC-CCHHHHHHHHHh
Q 043601 441 HPEILDAVVIPFP--DPEAGEVPIAYVVRSPNSS-LTKEDVQKFVAN 484 (488)
Q Consensus 441 ~~~v~~~~v~~~~--~~~~~~~~~~~v~~~~~~~-~~~~~i~~~~~~ 484 (488)
+|+|.+++|++.+ +...++..++++...++.. ....++.+++++
T Consensus 459 ~~~v~~~~vv~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~~ 505 (545)
T PRK07768 459 VEGVRPGNAVAVRLDAGHSREGFAVAVESNAFEDPAEVRRIRHQVAH 505 (545)
T ss_pred CcccccceEEEEEecCCCCceEEEEEEEecccccHHHHHHHHHHHHH
Confidence 9999998777654 3334455555555443321 122345555544
No 117
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=100.00 E-value=2.4e-50 Score=400.78 Aligned_cols=386 Identities=28% Similarity=0.430 Sum_probs=319.9
Q ss_pred eHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHHcCCeEeecCCCCCHHHHHHHHhhcCCeEEEEccc
Q 043601 56 TFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQFPICLLGVIAIGGIATTANPVYTVSELSKQVKDSSPKLVVTVPE 135 (488)
Q Consensus 56 Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~ 135 (488)
||+||.++++++|+.|.+.|+++||+|+++++|++++++++|||+++|++++|+++.++.+.+..+++.++++.+++++.
T Consensus 1 Ty~~l~~~~~~~a~~l~~~g~~~gd~v~i~~~~~~~~~~~~la~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 80 (436)
T TIGR01923 1 TWQDLDCEAAHLAKALKAQGIRSGSRVALVGQNSIEMVLLLHACLLLGAEIAMLNTRLTENERTNQLEDLDVQLLLTDSL 80 (436)
T ss_pred CHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHhcCcEEEecCcCCCHHHHHHHHHhcCCCEEEEcCc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred cHHHHhccCCCeEEEcccCcccCCCCcCCCCccchHHHHhhcCCCCCCCCCCCCCCCEEEEEcccCCCCCCchhhhccHH
Q 043601 136 LWERVKDFNIPAVLLGSNHIVSPRGLRSSSNIVYFDELIELSGNASNFPDVSVKQTDTAALLYSSGTTGVGKGAILTHKN 215 (488)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~ 215 (488)
..... +. ...+.++...... ..........+++++++|||||||.||+|.++|.+
T Consensus 81 ~~~~~-------~~-----------------~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~s~~~ 135 (436)
T TIGR01923 81 LEEKD-------FQ-----------------ADSLDRIEAAGRY-ETSLSASFNMDQIATLMFTSGTTGKPKAVPHTFRN 135 (436)
T ss_pred ccccc-------ee-----------------ecchHhhhhcccc-cccccccCCcCceEEEEeCCCCCCCCcEEEEehHH
Confidence 42110 00 0011111111110 11112344568899999999999999999999999
Q ss_pred HHHHhhHHhhhhhhcCCCCcEEEEecchhhHHhHHHHHHHHhhCCceEEEcCCCCHHHHHHHHHhcCccEEEecHHHHHH
Q 043601 216 FIASSLMTAMDQELAGALDYVTLCVLPMFHVFGLSFVVYAQLQKGNCVVSMRKFDLETALRAIEKYRVTHWWVVPPIILA 295 (488)
Q Consensus 216 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~ 295 (488)
+... .......+...+++++++.+|++|..++ ..++.++..|+++++.+.+ ..+++.++++++|++.++|+++..
T Consensus 136 ~~~~--~~~~~~~~~~~~~d~~~~~~~~~~~~~~-~~~~~~l~~g~~~~~~~~~--~~~~~~l~~~~~t~~~~~P~~l~~ 210 (436)
T TIGR01923 136 HYAS--AVGSKENLGFTEDDNWLLSLPLYHISGL-SILFRWLIEGATLRIVDKF--NQLLEMIANERVTHISLVPTQLNR 210 (436)
T ss_pred HHHH--HHHHHhhcCCCCCceEEEccCcHhHHHH-HHHHHHHhcCceEEecchH--HHHHHHHHHhCCeEEEeHHHHHHH
Confidence 9877 3335556678889999999999999988 6788999999999998764 499999999999999999999999
Q ss_pred HHhcCCccCCCCCCCccEEEEccCCCcHHHHHHHHhhCCCCeEEeccCcccccccccccCCCCCCCCCCceeecCCCceE
Q 043601 296 LAKNVSLVKKFDLSSLKGIGSGAAPLRKELVEECSKNLPTVTVFQGYGMTETCGVVTVENPLLGVQNSGSTGTLVAGVEA 375 (488)
Q Consensus 296 l~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 375 (488)
+++. ... .+++|.++++|+++++++.+.+.+. ++.+++.||+||++...+...... .....++|.|++++++
T Consensus 211 l~~~-~~~----~~~l~~~~~~G~~~~~~~~~~~~~~--~~~~~~~YG~tE~~~~~~~~~~~~-~~~~~~~G~~~~~~~~ 282 (436)
T TIGR01923 211 LLDE-GGH----NENLRKILLGGSAIPAPLIEEAQQY--GLPIYLSYGMTETCSQVTTATPEM-LHARPDVGRPLAGREI 282 (436)
T ss_pred HHhC-cCC----CCceEEEEECCCCCCHHHHHHHHHh--CCceeeEecCCccchhccCcCccc-cccccCCCccCCCcEE
Confidence 9876 221 2789999999999999999998764 599999999999987665443322 1222248999999999
Q ss_pred EEEeCCCCCCCCCCCcceEEEecC--------------------CccccceEEEccCCcEEEEcccCcceeeCcEEe---
Q 043601 376 QIVCVDTLKPLPPNQVGELWVRGP--------------------ILMPGDLGYFDEHGQLFIVDRIKELIKCNGFQV--- 432 (488)
Q Consensus 376 ~i~d~~~~~~~~~g~~Gel~v~g~--------------------~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v--- 432 (488)
++.+.+. ++.|||+++|+ ||.|||++++++||.+++.||.+|++|++|.+|
T Consensus 283 ~i~~~~~------~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~TGD~~~~~~dg~~~~~GR~~d~i~~~G~~v~~~ 356 (436)
T TIGR01923 283 KIKVDNK------EGHGEIMVKGANLMKGYLYQGELTPAFEQQGWFNTGDIGELDGEGFLYVLGRRDDLIISGGENIYPE 356 (436)
T ss_pred EEEeCCC------CCceEEEEECCccchhhCCChhhhhhhhcCCCeeccceEEEcCCCCEEEeccccCeEEeCCEeeCHH
Confidence 9844222 37799999985 478999999999999999999999999999999
Q ss_pred eHhHHHhcCCCeeeeEEEeecCCCCCceEEEEEEeCCCCCCCHHHHHHHHHhhcC
Q 043601 433 ELEGVLVSHPEILDAVVIPFPDPEAGEVPIAYVVRSPNSSLTKEDVQKFVANDSQ 487 (488)
Q Consensus 433 ~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~~~~~~l~ 487 (488)
+||.++.+++.|.+++|++.++...++.+.++|+.+++ .+.+++.+++++.|+
T Consensus 357 ~iE~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~--~~~~~l~~~l~~~l~ 409 (436)
T TIGR01923 357 EIETVLYQHPGIQEAVVVPKPDAEWGQVPVAYIVSESD--ISQAKLIAYLTEKLA 409 (436)
T ss_pred HHHHHHHhCCCeeEEEEeCCcchhcCCeeEEEEEECCC--CCHHHHHHHHHHhhh
Confidence 99999999999999999999887777888999988764 578889999988775
No 118
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=100.00 E-value=4.3e-50 Score=395.55 Aligned_cols=369 Identities=24% Similarity=0.334 Sum_probs=309.7
Q ss_pred eHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCCcchHHHHHHHHHcCCeEeecCCCCCHHHHHHHHhhcCCeEEEEcc
Q 043601 56 TFSQFKSIVIKVSHGFRH-LGVTKHDVVLIFAPNSIQFPICLLGVIAIGGIATTANPVYTVSELSKQVKDSSPKLVVTVP 134 (488)
Q Consensus 56 Ty~el~~~~~~la~~L~~-~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~ 134 (488)
||.||.+.++++|++|.+ .|+++||+|+++++|+++++++++||+++|++++|+++.++.+.+..+++.++++.+++++
T Consensus 1 t~~~l~~~~~~~a~~l~~~~g~~~gd~v~l~~~n~~~~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~l~~~~~~~ii~~~ 80 (408)
T TIGR01733 1 TYRELDERANRLARHLRAAGGVGPGDRVAVLLERSAELVVAILAVLKAGAAYVPLDPAYPAERLAFILEDAGARLLLTDS 80 (408)
T ss_pred CHHHHHHHHHHHHHHHHHhhCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEEEcCCCCCHHHHHHHHHhcCCCEEEEcC
Confidence 799999999999999998 8999999999999999999999999999999999999999999999999999999999998
Q ss_pred ccHHHHhccCCCeEEEcccCcccCCCCcCCCCccchHHHHhhcCCCCCCCCCCCCCCCEEEEEcccCCCCCCchhhhccH
Q 043601 135 ELWERVKDFNIPAVLLGSNHIVSPRGLRSSSNIVYFDELIELSGNASNFPDVSVKQTDTAALLYSSGTTGVGKGAILTHK 214 (488)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~ 214 (488)
+....+............. ......... ...........+++++++|||||||.||+|.+||.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~-~~~~~~~~~~~~~~~~i~~TSGTtG~pK~v~~s~~ 143 (408)
T TIGR01733 81 ALASRLAGLVLPIILVDPL----------------ELAALDDAP-APPPPDAPSGPDDLAYVIYTSGSTGRPKGVVVTHR 143 (408)
T ss_pred chhhhccccCCceEEechh----------------hhhhccccc-ccccccCCCCCCCcEEEEEcCCCCCCCCEEEeccH
Confidence 8776665443222222111 000000000 01111112457899999999999999999999999
Q ss_pred HHHHHhhHHhhhhhhcCCCCcEEEEecchhhHHhHHHHHHHHhhCCceEEEcCCCC---HHHHHHHHHhcCccEEEecHH
Q 043601 215 NFIASSLMTAMDQELAGALDYVTLCVLPMFHVFGLSFVVYAQLQKGNCVVSMRKFD---LETALRAIEKYRVTHWWVVPP 291 (488)
Q Consensus 215 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~~~~~---~~~~~~~l~~~~~t~l~~~p~ 291 (488)
++..... .....+....++.+++..|++|..++ ..++.++..|+++++.++.. +..+.+.+++++++.+.++|.
T Consensus 144 ~~~~~~~--~~~~~~~~~~~~~~~~~~p~~~~~~~-~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~~p~ 220 (408)
T TIGR01733 144 SLVNLLA--WLARRYGLDPDDRVLQFASLSFDASV-EEIFGTLLAGATLVVPPEDEERDAALLAALIAEHPVTVLNLTPS 220 (408)
T ss_pred HHHHHHH--HHHHhcCCCCCceEEEecCCccchhH-HHHHHHHhCCCEEEEcChhhccCHHHHHHHHHHcCceEEEeCHH
Confidence 9987733 34456667788999999999999988 78899999999999987643 688999999999999999999
Q ss_pred HHHHHHhcCCccCCCCCCCccEEEEccCCCcHHHHHHHHhhCCCCeEEeccCcccccccccccCCC-CCCC--CCCceee
Q 043601 292 IILALAKNVSLVKKFDLSSLKGIGSGAAPLRKELVEECSKNLPTVTVFQGYGMTETCGVVTVENPL-LGVQ--NSGSTGT 368 (488)
Q Consensus 292 ~~~~l~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~i~~~YG~tE~~~~~~~~~~~-~~~~--~~~~~g~ 368 (488)
+++.+.+. .. ..+++||.+++||+++++++.+.|.+.++++.+++.||+||++.++...... .... +..++|+
T Consensus 221 ~~~~l~~~-~~---~~~~~l~~v~~~g~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~G~ 296 (408)
T TIGR01733 221 LLALLAAA-LP---PALASLRLVILGGEALTPALVDRWRARGPGARLINLYGPTETTVWSTATLVDADDAPRESPVPIGR 296 (408)
T ss_pred HHHHHHHh-hh---hcccCceEEEEeCccCCHHHHHHHHHhCCCcEEEecccCCceEEEEEEEEcCccccCCccccccCc
Confidence 99999986 22 5688999999999999999999999999878999999999998776532211 1111 2678999
Q ss_pred cCCCceEEEEeCCCCCCCCCCCcceEEEecC-----------------------------CccccceEEEccCCcEEEEc
Q 043601 369 LVAGVEAQIVCVDTLKPLPPNQVGELWVRGP-----------------------------ILMPGDLGYFDEHGQLFIVD 419 (488)
Q Consensus 369 ~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~-----------------------------~~~tGD~~~~~~~g~l~~~G 419 (488)
|++++.++|+|+ ++++++.|+.|||+++|+ |+.|||+++++++|.+++.|
T Consensus 297 ~~~~~~~~i~~~-~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~TGDl~~~d~~g~~~~~g 375 (408)
T TIGR01733 297 PLANTRLYVLDD-DLRPVPVGVVGELYIGGPGVARGYLNRPELTAERFVPDPFAGGDGARLYRTGDLVRYLPDGNLEFLG 375 (408)
T ss_pred ccCCceEEEECC-CCCCCCCCCceEEEecCccccccccCChhhhhcceeeCCCCCCCCceEEECCceEEEcCCCCEEEee
Confidence 999999999996 489999999999999973 79999999999999999999
Q ss_pred ccCcceeeCcEEe---eHhHHHhcCCCeeeeEE
Q 043601 420 RIKELIKCNGFQV---ELEGVLVSHPEILDAVV 449 (488)
Q Consensus 420 R~~d~i~~~G~~v---~ie~~l~~~~~v~~~~v 449 (488)
|.+|+++.+|+++ +||+++.+++.|.+++|
T Consensus 376 R~~~~i~~~G~~v~~~~ie~~l~~~~~v~~~~v 408 (408)
T TIGR01733 376 RIDDQVKIRGYRIELGEIEAALLRHPGVREAVV 408 (408)
T ss_pred ccCCEEEeCeEEechHHHHHHHhcCcchhhhcC
Confidence 9999999999999 99999999999999875
No 119
>PTZ00297 pantothenate kinase; Provisional
Probab=100.00 E-value=4.8e-44 Score=383.45 Aligned_cols=416 Identities=13% Similarity=0.075 Sum_probs=312.4
Q ss_pred CCHHHHHhhccccCCCceEEEeC---CCCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHHcC
Q 043601 27 LSMVHFLFRNSASYGSKSALIDA---DSGESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQFPICLLGVIAIG 103 (488)
Q Consensus 27 ~~l~~~l~~~a~~~p~~~a~~~~---~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G 103 (488)
.|+.++|.+.++++|+++|+... ...+++||+|+.++++++|.+|.+.|+++||+|+|+++|+++|+++.+||+++|
T Consensus 427 ~Tl~dll~~~a~~~pd~~al~~~~~~g~~~~lTY~El~~~V~~lAa~L~~lGV~~GDrVaIls~N~~Ewvia~lA~~~~G 506 (1452)
T PTZ00297 427 RSLGEMWERSVTRHSTFRCLGQTSESGESEWLTYGTVDARARELGSGLLALGVRPGDVIGVDCEASRNIVILEVACALYG 506 (1452)
T ss_pred CCHHHHHHHHHHHCCCCeEEEEeccCCCceEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcC
Confidence 68999999999999999999642 123689999999999999999999999999999999999999999999999999
Q ss_pred CeEeecCCCCCHHHHHHHHhhcCCeEEEEccccHHHHhcc---CCCeEEEcccC-cccCCC--CcCCCCccchHHHHhhc
Q 043601 104 GIATTANPVYTVSELSKQVKDSSPKLVVTVPELWERVKDF---NIPAVLLGSNH-IVSPRG--LRSSSNIVYFDELIELS 177 (488)
Q Consensus 104 ~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~---~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~ 177 (488)
++.||+++ +..++.+++++++++++|++.+....+... .++.+++.... ...... ........++++++..+
T Consensus 507 aV~VPly~--t~~eL~yIL~~S~akvVfv~~~~l~kl~~i~~~~Lr~IIv~d~~~~~~~~~~~~~~~i~~~s~~~ll~~G 584 (1452)
T PTZ00297 507 FTTLPLVG--KGSTMRTLIDEHKIKVVFADRNSVAAILTCRSRKLETVVYTHSFYDEDDHAVARDLNITLIPYEFVEQKG 584 (1452)
T ss_pred CEEEeCCC--CHHHHHHHHHhcCCcEEEEchhHHHHHHhhcccCCcEEEEECCCcccccccccccCCcceeeHHHHHhcC
Confidence 99999975 467899999999999999998777666543 23334333210 000000 00112356788888765
Q ss_pred CCCCCCCCCCCCCCCEEEEEc---ccCCCCCCchhhhccHHHHHHhhHHhhhhh-hcCCCCcEEEEecchhhHHhHHHHH
Q 043601 178 GNASNFPDVSVKQTDTAALLY---SSGTTGVGKGAILTHKNFIASSLMTAMDQE-LAGALDYVTLCVLPMFHVFGLSFVV 253 (488)
Q Consensus 178 ~~~~~~~~~~~~~~~~a~i~~---TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (488)
...........++++++.|+| ||||||.||||++||.|+...+........ ....++++.++.+|++|.++. ...
T Consensus 585 ~~~~~~~~~~~~~dDlatIiYtSyTSGTTG~PKGVmLTH~Nlla~~~~~~~~~~~~~~~~~D~~Ls~LPLaHI~er-~~~ 663 (1452)
T PTZ00297 585 RLCPVPLKEHVTTDTVFTYVVDNTTSASGDGLAVVRVTHADVLRDISTLVMTGVLPSSFKKHLMVHFTPFAMLFNR-VFV 663 (1452)
T ss_pred cccCccccCCCCcccEEEEEecCCCCCCCcCCcEEEEeHHHHHHHHHHHhhhccccCCCCCCEEEEechHHHHHHH-HHH
Confidence 321111223447789999985 999999999999999999988443211111 124568999999999999996 566
Q ss_pred HHHhhCCceEEEcCCCCHHHHHHHHHhcCccEEEecHHHHHHHHhcCCcc-------------------------CCC--
Q 043601 254 YAQLQKGNCVVSMRKFDLETALRAIEKYRVTHWWVVPPIILALAKNVSLV-------------------------KKF-- 306 (488)
Q Consensus 254 ~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~-------------------------~~~-- 306 (488)
+.++..|+++.. +++..+++.|++++||+++++|.+++++....... ...
T Consensus 664 ~~~l~~G~~I~~---~d~~~lledL~~~rPTv~~~VPrv~ekI~~~i~~~~~~~~~~~~~lf~~A~~~k~~~~~~g~~~~ 740 (1452)
T PTZ00297 664 LGLFAHGSAVAT---VDAAHLQRAFVKFQPTILVAAPSLFSTSRLQLSRANERYSAVYSWLFERAFQLRSRLINIHRRDS 740 (1452)
T ss_pred HHHHHcCCEEEe---CCHHHHHHHHHHHCCEEEEecHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence 778999999874 36899999999999999999999999876542110 000
Q ss_pred --------------CCCCccEEEEccC--CCcHHHHHHHHhhCCCCeEEeccCcccccccccccCCCCCCCCCCceeecC
Q 043601 307 --------------DLSSLKGIGSGAA--PLRKELVEECSKNLPTVTVFQGYGMTETCGVVTVENPLLGVQNSGSTGTLV 370 (488)
Q Consensus 307 --------------~l~~lr~v~~~G~--~l~~~~~~~~~~~~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~g~~~ 370 (488)
--.++|.+++||. +++..+ .. ++.+...||.||.. +.+.+. ... ..|.|+
T Consensus 741 ~l~d~LVf~kir~~lGGrlr~~isGga~~~l~~~l-----~~--~i~i~~g~glTE~~---~~~~~~--~~~--~~G~Pl 806 (1452)
T PTZ00297 741 SLLRFIFFRATQELLGGCVEKIVLCVSEESTSFSL-----LE--HISVCYVPCLREVF---FLPSEG--VFC--VDGTPA 806 (1452)
T ss_pred HHHHHHHHHHHHHHhcCCeEEEEECCCccccChHH-----hC--CceEEEecceEEee---eecCCC--Ccc--cCCeec
Confidence 0147888888873 554333 22 36788899999953 223322 222 349999
Q ss_pred CCceEEEEeCCCCCCCCCCCcceEEEecC--Cccccce-EEEccCCcEEEEcccCcceee-CcEEe---eHhHHHhcCCC
Q 043601 371 AGVEAQIVCVDTLKPLPPNQVGELWVRGP--ILMPGDL-GYFDEHGQLFIVDRIKELIKC-NGFQV---ELEGVLVSHPE 443 (488)
Q Consensus 371 ~~~~~~i~d~~~~~~~~~g~~Gel~v~g~--~~~tGD~-~~~~~~g~l~~~GR~~d~i~~-~G~~v---~ie~~l~~~~~ 443 (488)
|+++++|.+.++... .+..|||++++. .-.|++. +.|++||+|.|.||++|+||. +|++| .||+.+.++|.
T Consensus 807 pgvEvKI~~~~E~~~--~~~~GEIlvr~~kdpe~T~e~~~gW~~dG~L~IidRkKdlikls~GEyVaP~~IE~~l~~sp~ 884 (1452)
T PTZ00297 807 PSLQVDLEPFDEPSD--GAGIGQLVLAKKGEPRRTLPIAAQWKRDRTLRLLGPPLGILLPVAYEYVIAAELERIFSQSRY 884 (1452)
T ss_pred CceEEEEcccccccC--CCCCCeEEEEECCChHHHHHhhCcCccCCeEEEEeccccceECCCCcEEcHHHHHHHHhcCCC
Confidence 999999987422111 234699999864 2345665 578899999999999999999 89999 99999999999
Q ss_pred eeeeEEEeecCCCCCceEEEEEEeC
Q 043601 444 ILDAVVIPFPDPEAGEVPIAYVVRS 468 (488)
Q Consensus 444 v~~~~v~~~~~~~~~~~~~~~v~~~ 468 (488)
|.+++|++.+.. .++|+|+++
T Consensus 885 I~qi~V~Gd~~k----~lvALVvpd 905 (1452)
T PTZ00297 885 VNDIFLYADPSR----PIIAIVSPN 905 (1452)
T ss_pred ccEEEEEecCCC----ceEEEEEeC
Confidence 999999987664 488999885
No 120
>COG1020 EntF Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=5.7e-37 Score=319.11 Aligned_cols=386 Identities=23% Similarity=0.318 Sum_probs=315.5
Q ss_pred CCHHHHHhhccccCCCceEEEeCCCCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHHcCCeE
Q 043601 27 LSMVHFLFRNSASYGSKSALIDADSGESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQFPICLLGVIAIGGIA 106 (488)
Q Consensus 27 ~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~ 106 (488)
.++.+.+.+++...|++.|+... +..+||+|+..+++++|+.|.+.|+.+++.|+++.+.+.++++.++|++++|..+
T Consensus 227 ~~i~~~f~~~a~~~p~~~a~~~~--~~~lty~el~~~a~~la~~l~~~g~~~~~~V~i~~~rs~~~i~~~l~ilkaG~~y 304 (642)
T COG1020 227 LTIHLLFEEQAATTPDAVALVRG--GQQLTYAELDARANRLARLLISLGVGPGETVAILADRSLELVVALLAVLKAGAAY 304 (642)
T ss_pred chHHHHHHHHHHhCCCceeEecC--CCcccHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCCHHHHHHHHHHHhcCCeE
Confidence 68999999999999999999887 7899999999999999999999999999999999989999999999999999999
Q ss_pred eecCCCCCHHHHHHHHhhcCCeEEEEccccHHHHhccCCCeEEEcccCcccCCCCcCCCCccchHHHHhhcCCCCCCCCC
Q 043601 107 TTANPVYTVSELSKQVKDSSPKLVVTVPELWERVKDFNIPAVLLGSNHIVSPRGLRSSSNIVYFDELIELSGNASNFPDV 186 (488)
Q Consensus 107 v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (488)
+|++|.++.+.+..+++...++.+++..+.......... +. .+........ ......
T Consensus 305 vP~d~~~P~~r~~~~l~~~~~~~~~~~~~~~~~~~~~~~----~~------------------~~~~~~~~~~-~~~~~~ 361 (642)
T COG1020 305 VPLDPLYPAERLAYILEDSRPTLLLTQAHLRVDDVGLPG----LA------------------LDDALSEIPD-TDPIPQ 361 (642)
T ss_pred ecCCCCChHHHHHHHHhhcCccEEEeccccccccccCCc----cc------------------cccccccCCc-cCcccc
Confidence 999999999999999999999999998333221111110 00 0000000000 011122
Q ss_pred CCCCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHhhhhhhcCCCCcEEEEecchhhHHhHHHHHHHHhhCCceEEEc
Q 043601 187 SVKQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTAMDQELAGALDYVTLCVLPMFHVFGLSFVVYAQLQKGNCVVSM 266 (488)
Q Consensus 187 ~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~ 266 (488)
...+++.++++|||||||.||||..+|.++.+. .......+.....+.++...++.+.... ..++.++..|++++..
T Consensus 362 ~~~~~~~ayiiytsgstg~Pkgv~~~h~~~~~~--~~~~~~~~~~~~~d~~l~~~s~~fD~~~-~~~f~~l~~G~~l~~~ 438 (642)
T COG1020 362 ALLGDALAYIIYTSGSTGQPKGVRIEHRALANL--LNDAGARFGLDADDRVLALASLSFDASV-FEIFGALLEGARLVLA 438 (642)
T ss_pred cCCCCCeEEEEEccCCCCCCCCceecCHHHHHH--HHHHHHhcCCCcccEEeecCCcccchhH-HHHHHHHhCCCEEEec
Confidence 345689999999999999999999999999884 4445555777888888888888666666 8889999999999998
Q ss_pred CC---CCHHHHHHHHHhcCccEEEecHHHHHHHHhcCCccC--CCCCCCccEEEEccCCCcHHHHHHHHhhCC-CCeEEe
Q 043601 267 RK---FDLETALRAIEKYRVTHWWVVPPIILALAKNVSLVK--KFDLSSLKGIGSGAAPLRKELVEECSKNLP-TVTVFQ 340 (488)
Q Consensus 267 ~~---~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~--~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~-~~~i~~ 340 (488)
+. .++..+.+.+.+++++.+..+|..+..+... .... ......+|.+++||+.++..+.+.+....+ ...+.+
T Consensus 439 ~~~~~~~~~~l~~~~~~~~vt~~~~~p~~~~~~~~~-~~~~~~~~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~~l~~ 517 (642)
T COG1020 439 PALLQVDPAALLELLEAQGITVLLLVPLLLRLLLLA-ALAPDLISPCERLRQLLSGGEALPLALVQRLLQLAALARRLLN 517 (642)
T ss_pred CccccCCHHHHHHHHHHcCCEEEEecHHHHHHHHhc-hhhccccCCcccccEEEEcCCCCCHHHHHHHHHhccccceEee
Confidence 65 6789999999999999999999999998875 2222 223335999999999999999999988764 478999
Q ss_pred ccCcccccccccccCCCCCCCCCCceeecCCCceEEEEeCCCCCCCCCCCcceEEEecC---------------------
Q 043601 341 GYGMTETCGVVTVENPLLGVQNSGSTGTLVAGVEAQIVCVDTLKPLPPNQVGELWVRGP--------------------- 399 (488)
Q Consensus 341 ~YG~tE~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~--------------------- 399 (488)
.||.||+.................++|+|.++..+.++| +.+++++.|..||+++.|.
T Consensus 518 ~ygpTe~~~~~~~~~~~~~~~~~~piG~p~~n~~~~ild-~~~~~~p~gv~gel~i~g~~~a~gy~~~p~lt~~~f~~~~ 596 (642)
T COG1020 518 LYGPTEATLDAPSFPISAELESRVPIGRPVANTQLYILD-QGLRPLPLGVPGELYIAGLGLALGYLNRPDLTAERFIALR 596 (642)
T ss_pred ccCccHHhhheeeEEcccccCCCCCcceeeCCCeEEEEC-CCCCcCCCCCCeeeEECCcchhhhhcCChhhhHHHhhhcc
Confidence 999999665444333222112256899999999999999 7899999999999999883
Q ss_pred CccccceEEEccCCcEEEEcccCcceeeCcEEe---eHhHHHhcCC
Q 043601 400 ILMPGDLGYFDEHGQLFIVDRIKELIKCNGFQV---ELEGVLVSHP 442 (488)
Q Consensus 400 ~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v---~ie~~l~~~~ 442 (488)
.|+|||++++..||.+.++||.|+++|++|.+| +||..+.++|
T Consensus 597 ~y~tgD~~r~~~dg~~e~lgr~D~qvki~g~Riel~eie~~l~~~~ 642 (642)
T COG1020 597 LYRTGDLARPLADGALEYLGRKDSQVKIRGFRIELGEIEAALAEQP 642 (642)
T ss_pred CccCCCeeeECCCCeEEEeccccceeEeceEecCcHHHHHHHhcCC
Confidence 478999999999999999999999999999999 9999888764
No 121
>PRK07824 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=1e-36 Score=294.33 Aligned_cols=267 Identities=27% Similarity=0.377 Sum_probs=223.9
Q ss_pred CCCCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHhhhhhhcCCCCcEEEEecchhhHHhHHHHHHHHhhCCceEEEc
Q 043601 187 SVKQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTAMDQELAGALDYVTLCVLPMFHVFGLSFVVYAQLQKGNCVVSM 266 (488)
Q Consensus 187 ~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~ 266 (488)
...++++++++|||||||.||+|+++|.++...... .... ....+.++...|++|..++ ..++.++..|++.++.
T Consensus 31 ~~~~~d~a~il~TSGTTG~PKgv~~s~~~l~~~~~~--~~~~--~~~~~~~~~~~p~~~~~g~-~~~~~~l~~g~~~v~~ 105 (358)
T PRK07824 31 EPIDDDVALVVATSGTTGTPKGAMLTAAALTASADA--THDR--LGGPGQWLLALPAHHIAGL-QVLVRSVIAGSEPVEL 105 (358)
T ss_pred CCCCCCeEEEEeCCCCCCCCCEEEecHHHHHHHHHH--HHhc--cCCCCeEEEECChHHHHHH-HHHHHHHHcCCeEEec
Confidence 445689999999999999999999999999876332 2222 2345678889999999998 5677888889988873
Q ss_pred ---CCCCHHHHHHHHHhcC--ccEEEecHHHHHHHHhcCCccCCCCCCCccEEEEccCCCcHHHHHHHHhhCCCCeEEec
Q 043601 267 ---RKFDLETALRAIEKYR--VTHWWVVPPIILALAKNVSLVKKFDLSSLKGIGSGAAPLRKELVEECSKNLPTVTVFQG 341 (488)
Q Consensus 267 ---~~~~~~~~~~~l~~~~--~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~i~~~ 341 (488)
..+++..+++.+++++ .++...+|..+..++.. . ....+++++|.+++||+++++++.+.+.+. ++++++.
T Consensus 106 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~p~~l~~~~~~-~-~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~--~~~v~~~ 181 (358)
T PRK07824 106 DVSAGFDPTALPRAVAELGGGRRYTSLVPMQLAKALDD-P-AATAALAELDAVLVGGGPAPAPVLDAAAAA--GINVVRT 181 (358)
T ss_pred CcCCCcCHHHHHHHHHHhCCCceEEEecHHHHHHHHhC-c-cccCCcccceEEEECCCCCCHHHHHHHHhc--CCcEEec
Confidence 4578999999999998 56667788888777654 2 223468899999999999999999999864 4999999
Q ss_pred cCcccccccccccCCCCCCCCCCceeecCCCceEEEEeCCCCCCCCCCCcceEEEecC-------------------Ccc
Q 043601 342 YGMTETCGVVTVENPLLGVQNSGSTGTLVAGVEAQIVCVDTLKPLPPNQVGELWVRGP-------------------ILM 402 (488)
Q Consensus 342 YG~tE~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~-------------------~~~ 402 (488)
||+||++..+. ..|.|++++++++.+ |||+++|+ ||+
T Consensus 182 YG~TE~~~~~~------------~~G~~~~g~~v~i~~------------Gei~v~g~~~~~gY~~~~~~~~~~~~g~~~ 237 (358)
T PRK07824 182 YGMSETSGGCV------------YDGVPLDGVRVRVED------------GRIALGGPTLAKGYRNPVDPDPFAEPGWFR 237 (358)
T ss_pred ccCCccCCCcC------------cCceeCCCCEEEecC------------CEEEEecCccccccCCCcccccccCCCcee
Confidence 99999875322 258899999999843 66666654 789
Q ss_pred ccceEEEccCCcEEEEcccCcceeeCcEEe---eHhHHHhcCCCeeeeEEEeecCCCCCceEEEEEEeCCCCCCCHHHHH
Q 043601 403 PGDLGYFDEHGQLFIVDRIKELIKCNGFQV---ELEGVLVSHPEILDAVVIPFPDPEAGEVPIAYVVRSPNSSLTKEDVQ 479 (488)
Q Consensus 403 tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v---~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~ 479 (488)
|||+|++ ++|.+++.||.||+||.+|++| +||.++.++|+|.+++|++.+++..++.++++|+.+++...+.++|+
T Consensus 238 TGDl~~~-~~g~l~i~GR~~d~i~~~G~~v~p~eIE~~l~~~~~V~~~~vv~~~~~~~g~~~~a~v~~~~~~~~~~~~i~ 316 (358)
T PRK07824 238 TDDLGAL-DDGVLTVLGRADDAISTGGLTVLPQVVEAALATHPAVADCAVFGLPDDRLGQRVVAAVVGDGGPAPTLEALR 316 (358)
T ss_pred cccEEEE-eCCEEEEEeccCCeEEECCEEECHHHHHHHHHhCCCcceEEEEecCCCCCceEEEEEEEeCCCCCcCHHHHH
Confidence 9999999 8999999999999999999999 99999999999999999999998888999999988877778899999
Q ss_pred HHHHhhcC
Q 043601 480 KFVANDSQ 487 (488)
Q Consensus 480 ~~~~~~l~ 487 (488)
++++++|+
T Consensus 317 ~~~~~~l~ 324 (358)
T PRK07824 317 AHVARTLD 324 (358)
T ss_pred HHHHhhCc
Confidence 99999886
No 122
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family. Ectothiorhodospira halophila. This enzyme is designated 6.2.1.12 and therefore joins a number of plant enzymes linked to lignin biosynthesis and given similar names.
Probab=100.00 E-value=1.2e-34 Score=278.21 Aligned_cols=262 Identities=19% Similarity=0.224 Sum_probs=207.0
Q ss_pred CCEEEEEcccCCCCCCchhhhccHHHHHHhhHHhhhhhhcC--CCCcEEEEecchhhHHhHHHHHHHHhhCCceEEEcCC
Q 043601 191 TDTAALLYSSGTTGVGKGAILTHKNFIASSLMTAMDQELAG--ALDYVTLCVLPMFHVFGLSFVVYAQLQKGNCVVSMRK 268 (488)
Q Consensus 191 ~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~~~ 268 (488)
+..++++|||||||.||+|++||.++.+.+.. ....+.. .+.+++++.+|++|.+++.+.++.++..|+++++..+
T Consensus 95 ~~~~~i~~TSGTTG~PKgV~~sh~~l~~~~~~--~~~~~~~~~~~~dr~l~~~Pl~h~~g~~~~~l~~l~~G~~vv~~~~ 172 (386)
T TIGR02372 95 PTARFTFATSGSTGTPKPVTHSWAALLSEAQA--IAKILGERPPPVRRVISCVPAHHLYGFLFSCLLPSRRGLEAKQLAA 172 (386)
T ss_pred CCceEEEECCCCCCCCceeEeeHHHHHHHHHH--HHHHhCcCCCCCCeEEEeCCcHHHHHHHHHHHHHHHCCCeEEecCC
Confidence 45789999999999999999999999876432 3333443 3346899999999999987778888999999999888
Q ss_pred CCHHHHHHHHHhcCccEEEecHHHHHHHHhcCCccCCCCCCCccEEEEccCCCcHHHHHHHHhhCCCCeEEeccCccccc
Q 043601 269 FDLETALRAIEKYRVTHWWVVPPIILALAKNVSLVKKFDLSSLKGIGSGAAPLRKELVEECSKNLPTVTVFQGYGMTETC 348 (488)
Q Consensus 269 ~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~i~~~YG~tE~~ 348 (488)
+++..+++.++.. ++++++|++++.+.+. . .++++++. ++||+++++++.+.+.+. +...+++.||+||++
T Consensus 173 ~~~~~~l~~i~~~--t~~~~~P~~l~~l~~~-~----~~l~slr~-i~gGa~l~~~l~~~~~~~-g~~~v~~~YG~TEt~ 243 (386)
T TIGR02372 173 APASGIMRHARPG--DLIVGTPFIWEQLADL-D----YRLPGVVG-VSSGAPSTAATWRCLLAA-GLARLLEVYGATETG 243 (386)
T ss_pred CChHHHHHhhccC--CEEEECcHHHHHHHhh-C----cCCCccee-EecCCCCCHHHHHHHHHh-cccchhheecccccc
Confidence 8888888887653 8999999999999864 1 34677875 688999999999999886 324789999999998
Q ss_pred ccccccCCCCCCCCCCceeecCCCceEEEEeCCCCCCCCCCCcceEEEecCCccccceEEEccCCcEEEEcccCcceeeC
Q 043601 349 GVVTVENPLLGVQNSGSTGTLVAGVEAQIVCVDTLKPLPPNQVGELWVRGPILMPGDLGYFDEHGQLFIVDRIKELIKCN 428 (488)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~~~~tGD~~~~~~~g~l~~~GR~~d~i~~~ 428 (488)
++++... ....|+++|++.+.+ +++... |. +.++.|||+++++++|++++.||+||+||++
T Consensus 244 ~i~~~~~-------~~~~~~~~p~~~~~~---~~~~~~-----g~----~~~~~tgD~g~~d~~G~l~i~GR~dd~Ik~~ 304 (386)
T TIGR02372 244 GIGLREA-------PDDPFRLLPDLACFA---DTLSSA-----GL----ARRLDLQDRLAWDKDGGFTILGRKDEILQVG 304 (386)
T ss_pred ccccccC-------CCCCcccCCCccccC---CCccCC-----Cc----cceeecCceEEEcCCCcEEEecccCCEEEEC
Confidence 7654321 223567888876654 222211 11 1256789999999999999999999999999
Q ss_pred cEEe---eHhHHHhcCCCeeeeEEEeecCCCCCceEEEEEEeCCCCCCC--HHHHHHHHHhhcC
Q 043601 429 GFQV---ELEGVLVSHPEILDAVVIPFPDPEAGEVPIAYVVRSPNSSLT--KEDVQKFVANDSQ 487 (488)
Q Consensus 429 G~~v---~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~--~~~i~~~~~~~l~ 487 (488)
|++| +||+++.++|+|.+++|+. .++.++++|+++++...+ .++++++++++|+
T Consensus 305 G~~V~p~eIE~~l~~~p~V~~~~v~~-----~g~~~~a~vv~~~~~~~~~~~~~l~~~~~~~L~ 363 (386)
T TIGR02372 305 GVNVSPGHVRDILERNPRVRAAAVRL-----DGRRLKAFIVVAEDADEAELEIELRATAARHLP 363 (386)
T ss_pred CEEEcHHHHHHHHHcCCCceEEEEEc-----CCceEEEEEEECCCCChHHHHHHHHHHHHHhCC
Confidence 9999 9999999999999999863 346889999988654333 5688999998876
No 123
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=100.00 E-value=5.8e-34 Score=280.63 Aligned_cols=293 Identities=19% Similarity=0.143 Sum_probs=220.4
Q ss_pred CCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHH-hhhhhhcCCCCcEEEEecchhhHHhHHHHHHHHhhCCceEEEcC
Q 043601 189 KQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMT-AMDQELAGALDYVTLCVLPMFHVFGLSFVVYAQLQKGNCVVSMR 267 (488)
Q Consensus 189 ~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~~ 267 (488)
..++++.+++||||||.||++.+||.++..+.... ......+..++|++++..+..+..+.....+..+..|++++..+
T Consensus 73 ~~~~~~~~~~TSGTTG~Pk~v~~t~~~~~~~~~~~~~~~~~~g~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 152 (422)
T TIGR02155 73 PREQVVRIHASSGTTGKPTVVGYTQNDIDTWSSVVARSIRAAGGRPGDLIHNAYGYGLFTGGLGAHYGAEKLGCTVVPIS 152 (422)
T ss_pred ChHHcEEEEECCCCCCCCeEeccCHHHHHHHHHHHHHHHHHcCCCCCcEEEEccCccccchhHHHHHHHHHcCcEEEecC
Confidence 45678899999999999999999999987553221 12233456788888877665443333344566788899999887
Q ss_pred CCCHHHHHHHHHhcCccEEEecHHHHHHHHhcCCccCCC--CCCCccEEEEccCCCcHHHHHHHHhhCCCCeEEeccCcc
Q 043601 268 KFDLETALRAIEKYRVTHWWVVPPIILALAKNVSLVKKF--DLSSLKGIGSGAAPLRKELVEECSKNLPTVTVFQGYGMT 345 (488)
Q Consensus 268 ~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~--~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~i~~~YG~t 345 (488)
..++..+++.|++++|++++++|+++..|++. ...... ...++|.++++||++++++.+.+.+.|+ +++++.||+|
T Consensus 153 ~~~~~~~~~~i~~~~~t~l~~~Ps~l~~L~~~-~~~~~~~~~~~~lr~i~~~ge~l~~~~~~~i~~~~g-~~v~~~YG~t 230 (422)
T TIGR02155 153 GGQTEKQVQLIQDFKPDIIMVTPSYMLNLLEE-LKRMGIDPAQTSLQVGIFGAEPWTNAMRKEIEARLG-MKATDIYGLS 230 (422)
T ss_pred CCCHHHHHHHHHHHCCCEEEEcHHHHHHHHHH-HHHcCCCcccCceEEEEEeCCcCCHHHHHHHHHHhC-CceEecccch
Confidence 77889999999999999999999999998876 222222 2358999999999999999999999997 8999999999
Q ss_pred cccc-cccccCCCCCCCCCCceeecCCCceEEEEeCCCCCCCCCCCcceEEEecC--------CccccceEEEccC-C--
Q 043601 346 ETCG-VVTVENPLLGVQNSGSTGTLVAGVEAQIVCVDTLKPLPPNQVGELWVRGP--------ILMPGDLGYFDEH-G-- 413 (488)
Q Consensus 346 E~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~--------~~~tGD~~~~~~~-g-- 413 (488)
|+++ .+...... ...+ ...+.+.+.++|+|++++++++.|+.|||++++. ||+|||+++++++ |
T Consensus 231 E~~~~~~~~~~~~---~~~g-~~~~~~~~~~eivd~~~g~~v~~Ge~Gelvvt~~~~~~~p~~ry~TGDl~~~~~~~Gr~ 306 (422)
T TIGR02155 231 EVIGPGVAMECVE---TQDG-LHIWEDHFYPEIIDPHTGEVLPDGEEGELVFTTLTKEALPVIRYRTRDLTRLLPGTART 306 (422)
T ss_pred hhcCCceeecccc---cCCC-ceEecCeeEEEEECCCCCCCCCCCCeeEEEEecCCccccceeeEEcCcEEEEECCCCCc
Confidence 9853 22211110 1111 1122346778899977899999999999999974 7999999999876 4
Q ss_pred ---cEEEEcccCcceeeCcEEe---eHhHHHhcCCCeeeeEEEeecCCCCCceEEEEEEeCCCCCC-C--------HHHH
Q 043601 414 ---QLFIVDRIKELIKCNGFQV---ELEGVLVSHPEILDAVVIPFPDPEAGEVPIAYVVRSPNSSL-T--------KEDV 478 (488)
Q Consensus 414 ---~l~~~GR~~d~i~~~G~~v---~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~-~--------~~~i 478 (488)
.+++.||.+|+|+++|.+| +||.++.++|.|.....+........+.+.+.|+..++... . .++|
T Consensus 307 ~~~~~~i~GR~~d~i~~~G~~v~p~eie~~l~~~~~v~~~~q~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~i 386 (422)
T TIGR02155 307 MRRMDRITGRSDDMLIIRGVNVFPTQLEEVILKMDELSPHYQLELTRNGHMDELTLKVELKPESYTLRLHEQASLLAGEI 386 (422)
T ss_pred ccccccccCccCCeEEECCEEECHHHHHHHHHhCcCcCCCEEEEEEcCCCccEEEEEEEEecCcccccchHHHHHHHHHH
Confidence 4689999999999999999 99999999999984444444444455677777777654211 1 4667
Q ss_pred HHHHHhhcC
Q 043601 479 QKFVANDSQ 487 (488)
Q Consensus 479 ~~~~~~~l~ 487 (488)
+++++++++
T Consensus 387 ~~~~~~~~~ 395 (422)
T TIGR02155 387 QHTIKQEVG 395 (422)
T ss_pred HHHHHhccC
Confidence 788877764
No 124
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=99.97 E-value=4.1e-29 Score=246.15 Aligned_cols=284 Identities=17% Similarity=0.138 Sum_probs=206.5
Q ss_pred CCCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHh-hhhhhcCCCCcEEEEecchhhHHhHHHHHHHHhhCCceEEEc
Q 043601 188 VKQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTA-MDQELAGALDYVTLCVLPMFHVFGLSFVVYAQLQKGNCVVSM 266 (488)
Q Consensus 188 ~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~ 266 (488)
...++++.+++||||||.||+|.+||.++........ .....+..++|+++...++.+..+.....+.++..|++++..
T Consensus 83 ~~~~~i~~i~~TSGTTG~Pk~v~~T~~dl~~~~~~~~r~~~~~G~~~gD~vl~~~~~~~~~g~~~~~~~~~~~Ga~vi~~ 162 (445)
T TIGR03335 83 ADWKDIYTIHETSGTSGTPKSFFLTWDDWKRYAEKYARSFVSQGFTAGDRMVICASYGMNVGANTMTLAAREVGMSIIPE 162 (445)
T ss_pred CCHHHeEEEEeCCCCCCCcceeeecHHHHHHHHHHHHHHHHHcCCCCCCeEEEEecCCcchhHHHHHHHHHHcCCEEEcC
Confidence 4567889999999999999999999999876532211 112235678899998888877655534456678889887654
Q ss_pred CCCCHHHHHHHHHhcCccEEEecHHHHHHHHhcCCccCCC--CCCCccEEEEccCCCcHHHHHHHHhhCCCCeEEeccCc
Q 043601 267 RKFDLETALRAIEKYRVTHWWVVPPIILALAKNVSLVKKF--DLSSLKGIGSGAAPLRKELVEECSKNLPTVTVFQGYGM 344 (488)
Q Consensus 267 ~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~--~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~i~~~YG~ 344 (488)
.. ....++.+++++++.+.++|+.+..+++.+ ..... ...++|.+++|||++++++++.+.+.|+ +.+++.||+
T Consensus 163 ~~--~~~~~~~i~~~~~t~l~~~ps~ll~La~~~-~~~g~~~~~~~lr~ii~gGE~l~~~~r~~ie~~~g-~~v~~~YG~ 238 (445)
T TIGR03335 163 GK--CTFPIRIIESYRPTGIVASVFKLLRLARRM-KAEGIDPAESSIRRLVVGGESFADESRNYVEELWG-CEVYNTYGS 238 (445)
T ss_pred Cc--hhHHHHHHHHhCCCEEEECHHHHHHHHHHH-HHcCCCcccCcceEEEEcCCCCCHHHHHHHHHHhC-CcEEecCCh
Confidence 43 356789999999999999999988887652 22222 2468999999999999999999999997 999999999
Q ss_pred ccccccccccCCCCCCCCCCceeecC--CCceEEEEeCCCCCCCCCCCcceEEEecC------------CccccceEEEc
Q 043601 345 TETCGVVTVENPLLGVQNSGSTGTLV--AGVEAQIVCVDTLKPLPPNQVGELWVRGP------------ILMPGDLGYFD 410 (488)
Q Consensus 345 tE~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~i~d~~~~~~~~~g~~Gel~v~g~------------~~~tGD~~~~~ 410 (488)
||++ ++..+.. ..|..+ +.+.++|+|++++.++++|+.|||++++. .|+|||++++.
T Consensus 239 TE~~-~~~~c~~--------~~g~h~~~d~~~vEIvDp~~~~~vp~Ge~GELvvT~L~~~~~r~~~PliRYrtgD~~~~~ 309 (445)
T TIGR03335 239 TEGT-MCGECQA--------VAGLHVPEDLVHLDVYDPRHQRFLPDGECGRIVLTTLLKPGERCGSLLINYDTEDTTVVI 309 (445)
T ss_pred hhhh-heEEecC--------CCCccccCCceEEEEEcCCCCCCCcCCCceEEEEEecCCCCccCCceEEEeecCceEEEe
Confidence 9986 2222211 113333 45789999988888999999999999864 46789999873
Q ss_pred c-C----C----cEEEEcccCcceeeCcEEe---eHhHHHhcC---CCee-eeEEEeecCCCCCceEEEEEEeCCCCCCC
Q 043601 411 E-H----G----QLFIVDRIKELIKCNGFQV---ELEGVLVSH---PEIL-DAVVIPFPDPEAGEVPIAYVVRSPNSSLT 474 (488)
Q Consensus 411 ~-~----g----~l~~~GR~~d~i~~~G~~v---~ie~~l~~~---~~v~-~~~v~~~~~~~~~~~~~~~v~~~~~~~~~ 474 (488)
. + | .+...||.||+++++|.+| +||+++.++ +++. +..++........+.+.+.|...+....+
T Consensus 310 ~~~~C~CGr~~~r~~~~gR~dd~~~~~g~~~~p~~ie~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~e~~~~~~~~ 389 (445)
T TIGR03335 310 SRDRCPCGRTHMRILNPEREAETIWISGVPFNRVDVERAVFQRENMDSLTGEYEAFLYGEEEGEITLRVSLECEDKDNCS 389 (445)
T ss_pred cCCCCCCCCCcceeCCCcccCceEEECCEEeCHHHHHHHHhccCCCCCCCccEEEEEecCCCCCceEEEEEEecCcccch
Confidence 2 2 2 2445699999999999999 999999995 5543 45555544333334666667776554334
Q ss_pred HHHHHHHHHh
Q 043601 475 KEDVQKFVAN 484 (488)
Q Consensus 475 ~~~i~~~~~~ 484 (488)
.+++.+.+.+
T Consensus 390 ~~~~~~~~~~ 399 (445)
T TIGR03335 390 IHDIQENFTG 399 (445)
T ss_pred HHHHHHHHHH
Confidence 4454444443
No 125
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only]
Probab=99.96 E-value=1.6e-27 Score=236.52 Aligned_cols=422 Identities=17% Similarity=0.245 Sum_probs=307.5
Q ss_pred CCHHHHHhhccccCCCceEEEeCC----CCcceeHHHHHHHHHHHHHHHHHc-CCCCCCEEEEEcCCCcchHHHHHHHHH
Q 043601 27 LSMVHFLFRNSASYGSKSALIDAD----SGESLTFSQFKSIVIKVSHGFRHL-GVTKHDVVLIFAPNSIQFPICLLGVIA 101 (488)
Q Consensus 27 ~~l~~~l~~~a~~~p~~~a~~~~~----~~~~~Ty~el~~~~~~la~~L~~~-g~~~g~~V~i~~~n~~~~~~~~lA~~~ 101 (488)
.++.|+|...++++|+.+|+..-. ...++||.+|..++.+++.+|... -+++||.|+++++++.|++++++||+.
T Consensus 770 ~~ile~Lq~R~a~tp~~~a~~~~n~~~~~~~~~Tw~~f~krva~i~~~l~~k~~lk~Gd~V~Lmy~~sie~vaa~~~Cly 849 (1363)
T KOG3628|consen 770 LTILEILQWRAAKTPDHIAFTTLNARGATKKTLTWAQFHKRVARIAEYLQDKGHLKAGDHVVLMYPPSIEFVAAIYACLY 849 (1363)
T ss_pred HHHHHHHHHHhhcCCCceEEEEeccCCcccceeEHHHHHHHHHHHHHHHHhcccCCCCCeEEEEcCChHHHHHHHHHHHh
Confidence 789999999999999999996431 237899999999999999999875 589999999999999999999999999
Q ss_pred cCCeEeecCCCCC------HHHHHHHHhhcCCeEEEEccccHHHHhccCC---------CeEEEcccCcccCCCCcCCCC
Q 043601 102 IGGIATTANPVYT------VSELSKQVKDSSPKLVVTVPELWERVKDFNI---------PAVLLGSNHIVSPRGLRSSSN 166 (488)
Q Consensus 102 ~G~~~v~l~~~~~------~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~ 166 (488)
+|++++|++|... ...+..+++.+++++|+++......++.... +.+....+ ...
T Consensus 850 ~GliPIpv~p~~~s~l~~~l~~~~~ii~~~kv~ailv~~~v~~lLrsr~~s~~~~~s~~p~i~~~~~----------~~~ 919 (1363)
T KOG3628|consen 850 LGLIPIPVPPPHASNLIEDLPTFRMIIKVYKVAAILVDQKVLKLLRSREASAHVDQSAIPLILVLPK----------LPE 919 (1363)
T ss_pred cCeeeeccCCccHHhhhhhhHHHHHHHHHhhhheEEecHHHHHHHhhhhHHHHhhhhcchhhhcccc----------cch
Confidence 9999999998553 4678899999999999999887766654421 11111100 000
Q ss_pred ccchHHHHhh-cCCCCCCCCCCCCCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHhhhhhhcCCCCcEEEEecchhh
Q 043601 167 IVYFDELIEL-SGNASNFPDVSVKQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTAMDQELAGALDYVTLCVLPMFH 245 (488)
Q Consensus 167 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (488)
++...... .......++.-.+...+|++-+.--++|.--++.+||+++++.+.. ........+..-++...+.+.
T Consensus 920 --t~~k~~~~~~k~~~~~~~g~~~k~~~a~v~~~~~~dg~l~~~~msHsslla~Ck~--iKe~~~l~~~rpl~~~~~~~s 995 (1363)
T KOG3628|consen 920 --TIRKRKKNIKKLNTPTPPGLNNKETPALVWFNVSTDGMLIGVKMSHSSLLAFCKI--IKETCQLYKSRPLLGCSSPYS 995 (1363)
T ss_pred --hhhhhhhhhhccCCCCCccccCCCceEEEEEEecCCcceeeeeccHHHHHHHHHH--HHHHHccccCCceEEEecCcc
Confidence 01111110 0111222333456678999988888999999999999999988444 556666777777888888888
Q ss_pred HHhHHHHHHHHhhCCceEEEcCC----CCHHHHHHHHHhcCccEEEecHHHHHHHHhcCCccC------CCCCCCccEEE
Q 043601 246 VFGLSFVVYAQLQKGNCVVSMRK----FDLETALRAIEKYRVTHWWVVPPIILALAKNVSLVK------KFDLSSLKGIG 315 (488)
Q Consensus 246 ~~~~~~~~~~~l~~G~~~~~~~~----~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~------~~~l~~lr~v~ 315 (488)
..|+..+.+..++.|.+.+++++ -++..+++.++++++.-++.+-..++.+.+..+... ..+.++ ..++
T Consensus 996 Glgf~~wcLlgVysGh~T~Li~p~~l~nnpsLll~~i~~~kvkDt~~~~~tln~c~~~l~t~~enl~~~gnn~s~-s~vv 1074 (1363)
T KOG3628|consen 996 GLGFNHWCLLGVYSGHPTLLISPMDLENNPSLLLQIISQYKVKDTYPTYSTLNLCQKGLETSVENLSKRGNNTSS-SIVV 1074 (1363)
T ss_pred chhHHHHHHHHHHcCCceeecCHHHhhcCHHHHHHHHhcccccccchhHHHHHHHHhccccccchhhhhhccccc-ceee
Confidence 88888888999999999887765 478999999999999999999999988877632221 122222 4555
Q ss_pred EccCCCcHHHHHHHHhhCCCC-----eEEeccCcccccccccccC-----CCC----------C------CCC-----CC
Q 043601 316 SGAAPLRKELVEECSKNLPTV-----TVFQGYGMTETCGVVTVEN-----PLL----------G------VQN-----SG 364 (488)
Q Consensus 316 ~~G~~l~~~~~~~~~~~~~~~-----~i~~~YG~tE~~~~~~~~~-----~~~----------~------~~~-----~~ 364 (488)
..-+.....+.+-|.+.|... .+.-.|++-== ..++... +.. + ... ..
T Consensus 1075 ~~~~RPr~ali~sf~klfa~igLsp~avStsys~r~N-p~Ic~r~~sg~~Pt~~y~D~raLR~grV~~ve~~ap~~l~L~ 1153 (1363)
T KOG3628|consen 1075 PAEERPRIALIASFKKLFAAIGLSPRAVSTSYSSRVN-PFICLRSYSGPEPTTVYLDARALREGRVRLVEVGAPHSLLLY 1153 (1363)
T ss_pred ecCCccHHHHHHHHHHHHHHcCCChhhhcccccccCC-hHhhhccccCCCCcceeechhhhhccceeeeecCCCCccccc
Confidence 566777777777777766321 12222332211 1111110 000 0 000 01
Q ss_pred ceeecCCCceEEEEeCCCCCCCCCCCcceEEEecC-------------------------------CccccceEEEc---
Q 043601 365 STGTLVAGVEAQIVCVDTLKPLPPNQVGELWVRGP-------------------------------ILMPGDLGYFD--- 410 (488)
Q Consensus 365 ~~g~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~-------------------------------~~~tGD~~~~~--- 410 (488)
-.|...+++++.|++||+..+|.+|+.||||+.+. |.+|||+|++.
T Consensus 1154 dSG~~~~~~~i~IvnPEtk~pc~dge~GEIW~~S~hnA~~~~~~~d~~~~~~fn~rl~~g~~~~~sy~RTG~LGFl~~t~ 1233 (1363)
T KOG3628|consen 1154 DSGKLPVYTDIAIVNPETKGPCRDGELGEIWVNSAHNASCSFTIGDELRSNHFNARLSSGDLLGKSYARTGDLGFLRRTS 1233 (1363)
T ss_pred cCCcccccceeEEeCCccccccccCCcceEEeccccccccccccCchhhhhhhhhhccccccccccceeeeeeeeeeeee
Confidence 23778899999999999999999999999999874 67789999874
Q ss_pred ---cC----CcEEEEcccCcceeeCcEEe---eHhHHHh-cCCCeeeeEEEeecCCCCCceEEEEEEeCC
Q 043601 411 ---EH----GQLFIVDRIKELIKCNGFQV---ELEGVLV-SHPEILDAVVIPFPDPEAGEVPIAYVVRSP 469 (488)
Q Consensus 411 ---~~----g~l~~~GR~~d~i~~~G~~v---~ie~~l~-~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~ 469 (488)
.+ ..||++|-.++.+-++|.+. |||..+. .||.|-+|+|+-... .+++.+....
T Consensus 1234 ~t~~~~e~~~~LyVlG~i~EtlEl~GL~h~p~DIE~TV~~vH~~I~~cavF~~~g-----lvVvviE~~g 1298 (1363)
T KOG3628|consen 1234 LTDANVERHDLLYVLGAIDETLELNGLRHFPSDIETTVERVHPSIGGCAVFQATG-----LVVVVIECHG 1298 (1363)
T ss_pred cccccceeeeeEEEeecccceeeecCcccCcchHHHHHHHhcccccceeeEeeCC-----eEEEEEEecC
Confidence 12 26899999999999999888 9999666 689999999995543 6666666654
No 126
>TIGR03089 conserved hypothetical protein TIGR03089. This protein family is found, so far, only in the Actinobacteria (Streptomyces, Mycobacterium, Corynebacterium, Nocardia, Propionibacterium, etc.) and never more than one to a genome. Members show twilight-level sequence similarity to family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=99.96 E-value=6.8e-27 Score=208.06 Aligned_cols=220 Identities=19% Similarity=0.132 Sum_probs=165.8
Q ss_pred HhhccccCCCceEEEeC-C---CCcceeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCCcchHHHHHHHHHcCCeEe
Q 043601 33 LFRNSASYGSKSALIDA-D---SGESLTFSQFKSIVIKVSHGFRH-LGVTKHDVVLIFAPNSIQFPICLLGVIAIGGIAT 107 (488)
Q Consensus 33 l~~~a~~~p~~~a~~~~-~---~~~~~Ty~el~~~~~~la~~L~~-~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v 107 (488)
|...++++|+++|++.. + ++.++||+||.++++++|+.|++ .|+++||+|+++++|++++++++||++++|++++
T Consensus 2 ~~~~~~~~p~~~al~~~~~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~Gv~~GdrV~i~~~n~~~~~~~~~a~~~~G~v~v 81 (227)
T TIGR03089 2 LSPLLAADPASPRLTFYDDATGERVELSAATLANWVAKTANLLQDELDAEPGSRVALDLPAHWQTAVWLLAAWSTGVEVV 81 (227)
T ss_pred hhhhhhhCCCCcEEEEEcCCCCeeEEEEHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEE
Confidence 45678889999999742 2 23479999999999999999998 7999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHHHHhhcCCeEEEEccccHHHHhccCCCeEEEcccCcccCCCCcCCCCccchHHHHhhcCCCCCCCCC-
Q 043601 108 TANPVYTVSELSKQVKDSSPKLVVTVPELWERVKDFNIPAVLLGSNHIVSPRGLRSSSNIVYFDELIELSGNASNFPDV- 186 (488)
Q Consensus 108 ~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 186 (488)
|++ .+++++++++++....+... ...+.+...............+..++.+.+.... ....+.
T Consensus 82 p~n-------------~s~a~~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 145 (227)
T TIGR03089 82 LAG-------------DPDADVVVTGPDRLAAAAGS-GEVVALSLDPLGRRVAGELPPGVIDFAPEVRVHG--DQFAPYE 145 (227)
T ss_pred eCC-------------CCCCCEEEeCcchhhhcccC-CceEEEeccccccCCCCCCCCcccchhhhhhccC--CCCCCCC
Confidence 995 68999999998877765422 2222221100000000001122235555554322 111112
Q ss_pred CCCCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHhhhhhhcCCCCcEEEEecchhhHHhHHHHHHHHhhCCceEEEc
Q 043601 187 SVKQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTAMDQELAGALDYVTLCVLPMFHVFGLSFVVYAQLQKGNCVVSM 266 (488)
Q Consensus 187 ~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~ 266 (488)
...++|++.++||||+ +|.++.... ...+..++|+++ ..|++|..|+...++.++..|+++++.
T Consensus 146 ~~~~~D~a~l~yTsg~---------~~~~~~~~~------~~~~l~~~D~~l-~~Pl~H~~gl~~~~~~~l~~G~t~v~~ 209 (227)
T TIGR03089 146 PPDATAPALVAGGGEW---------TGAELVAAA------RAAGLPPGDRVL-VLAWTDLEDFLATLLAPLAAGGSLVLV 209 (227)
T ss_pred CCCCCcceeeeccccc---------cHHHHHHHH------hhcCCCCCCeEE-ecCCCchHHHHHHHHHHhccCceEEEe
Confidence 4466899999999985 566655542 345568899999 999999999988899999999999999
Q ss_pred CCCCHHHHHHHHHhcCcc
Q 043601 267 RKFDLETALRAIEKYRVT 284 (488)
Q Consensus 267 ~~~~~~~~~~~l~~~~~t 284 (488)
+++++..+++.|+++++|
T Consensus 210 ~rFd~~~~l~~i~~~~vT 227 (227)
T TIGR03089 210 THPDPARLDQIAETERVT 227 (227)
T ss_pred cCCCHHHHHHHHHhhcCC
Confidence 999999999999999986
No 127
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=99.95 E-value=2.7e-26 Score=214.36 Aligned_cols=276 Identities=21% Similarity=0.151 Sum_probs=215.7
Q ss_pred CCCCCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHh-hhhhhcCCCCcEEEEecchh-hHHhHHHHHHHHhhCCceE
Q 043601 186 VSVKQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTA-MDQELAGALDYVTLCVLPMF-HVFGLSFVVYAQLQKGNCV 263 (488)
Q Consensus 186 ~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~G~~~ 263 (488)
.....++...|-.||||||.|+.+.+|+..+..++.... .....+...+|++.++..+. +..|+ ...+.+--.|+++
T Consensus 85 ~~~~~~~i~~ihaSSGTTGkPt~~~~t~~D~~~wa~~~aR~~~~~g~~~gd~v~~~~~yGl~tgg~-~~~~ga~rig~~v 163 (438)
T COG1541 85 FAVPKEEIVRIHASSGTTGKPTVFGYTAKDIERWAELLARSLYSAGVRKGDKVQNAYGYGLFTGGL-GLHYGAERIGATV 163 (438)
T ss_pred ccccccceEEEEccCCCCCCceeeecCHHHHHHHHHHHHHHHHHccCCCCCEEEEEeeeccccCCc-hhHHHHHhhCEEE
Confidence 345566777799999999999999999998887643322 22223356777777766532 22232 3344445589999
Q ss_pred EEcCCCCHHHHHHHHHhcCccEEEecHHHHHHHHhcCCccC-CCCCCCccEEEEccCCCcHHHHHHHHhhCCCCeEEecc
Q 043601 264 VSMRKFDLETALRAIEKYRVTHWWVVPPIILALAKNVSLVK-KFDLSSLKGIGSGAAPLRKELVEECSKNLPTVTVFQGY 342 (488)
Q Consensus 264 ~~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~-~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~i~~~Y 342 (488)
+...+-+.+..+++++.+++|++.++|+++..|++.+.... ...-.+||.+++|+|++++++++.+.+.|+ +..++.|
T Consensus 164 ip~~~g~~~~~~~l~~df~~tvI~~tps~~l~lae~~~~~G~~~~~~~lk~~i~gaE~~see~R~~ie~~~g-~~~~diY 242 (438)
T COG1541 164 IPISGGNTERQLELMKDFKPTVIAATPSYLLYLAEEAEEEGIDPDKLSLKKGIFGAEPWSEEMRKVIENRFG-CKAFDIY 242 (438)
T ss_pred EccCCccHHHHHHHHHhcCCcEEEEChHHHHHHHHHHHHcCCChhhcceeEEEEecccCCHHHHHHHHHHhC-Cceeecc
Confidence 88877788999999999999999999999999999844332 244568999999999999999999999997 9999999
Q ss_pred Ccccccccc-cccCCCCCCCCCCceeecCCCceEEEEeCCCCCCCCCCCcceEEEecC--------CccccceEEEccC-
Q 043601 343 GMTETCGVV-TVENPLLGVQNSGSTGTLVAGVEAQIVCVDTLKPLPPNQVGELWVRGP--------ILMPGDLGYFDEH- 412 (488)
Q Consensus 343 G~tE~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~--------~~~tGD~~~~~~~- 412 (488)
|+||..+.+ ..+... .-..-.-+...++++||++++.+++|+.|||+++.. .|+|||+.++.++
T Consensus 243 GltE~~g~g~~eC~~~------~glhi~eD~~~~Ei~dP~t~e~l~dge~GelV~T~L~~~~~PlIRYrtgDit~i~~~~ 316 (438)
T COG1541 243 GLTEGFGPGAGECTER------NGLHIWEDHFIFEIVDPETGEQLPDGERGELVITTLTKEGMPLIRYRTGDITVILSDP 316 (438)
T ss_pred ccccccCCcccccccc------cCCCcchhhceeeeecCCcCccCCCCCeeEEEEEeccccCcceEEEEcCCeeEecccC
Confidence 999996654 211111 112223357889999999999999999999999974 6899999998653
Q ss_pred ---C-----cEEEEcccCcceeeCcEEe---eHhHHHhcCCCee-eeEEEeecCCCCCceEEEEEEeCCC
Q 043601 413 ---G-----QLFIVDRIKELIKCNGFQV---ELEGVLVSHPEIL-DAVVIPFPDPEAGEVPIAYVVRSPN 470 (488)
Q Consensus 413 ---g-----~l~~~GR~~d~i~~~G~~v---~ie~~l~~~~~v~-~~~v~~~~~~~~~~~~~~~v~~~~~ 470 (488)
| ...+.||.||++++.|.+| .||.++.+.+.+. +.+++... ....+.+.+.|+.+++
T Consensus 317 C~cGr~~~ri~~I~GR~dD~l~~~G~~vfp~~ie~~l~~~~~~~~~yqi~~~~-~~~~d~L~V~vE~~~~ 385 (438)
T COG1541 317 CGCGRTHRRIERIEGRSDDMLIVRGVNVFPSQIERVLLQIPEVTPHYQIILTR-NGGLDELTVRVELENE 385 (438)
T ss_pred CCCCCccccccccCcccccEEEECCEEeCHHHHHHHHhcccCCCceEEEEEec-CCCCceEEEEEEecCc
Confidence 2 3568899999999999999 9999999999999 77777776 5666789999998765
No 128
>KOG1178 consensus Non-ribosomal peptide synthetase/alpha-aminoadipate reductase and related enzymes [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.93 E-value=1.9e-24 Score=221.48 Aligned_cols=441 Identities=17% Similarity=0.167 Sum_probs=284.6
Q ss_pred CHHHHHhhccccCCCceEEEeC----CCC--cceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHH
Q 043601 28 SMVHFLFRNSASYGSKSALIDA----DSG--ESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQFPICLLGVIA 101 (488)
Q Consensus 28 ~l~~~l~~~a~~~p~~~a~~~~----~~~--~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~ 101 (488)
++...+.+.+...|..++..+- ..+ ..+||++....++.+++.|...|..+|+.|++++..+.++++..++.++
T Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~i~~~t~r~~~~~~n~~~q~l~~~~~~~~~~v~i~~~~~~d~~v~v~~~~~ 116 (1032)
T KOG1178|consen 37 TLEDSFRRELAEAPENTGHVIIPTASESGIIDSFTYRLIRLLSNIIAQFLVSLGSLRGTTVAIYMLPSVDLVVSVFAVLA 116 (1032)
T ss_pred chhhHHHHHHhhcccCCCceEeecccccccccchhhhhhhcccchhHHHhhhcccccCceEEEeccCcCCeeeeeeehhh
Confidence 4555677778888877776532 112 6899999999999999999999999999999999999999999999999
Q ss_pred cCCeEeecCCCCC----HHHHHHHHhhcCCe-EEEEccccHHHHhccCCCeEEEcccCcccCCCCcCCCCccchHHHHhh
Q 043601 102 IGGIATTANPVYT----VSELSKQVKDSSPK-LVVTVPELWERVKDFNIPAVLLGSNHIVSPRGLRSSSNIVYFDELIEL 176 (488)
Q Consensus 102 ~G~~~v~l~~~~~----~~~l~~~l~~~~~~-~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (488)
+|..+++++|.++ .+.+..+.....-. .-+......-.+...+ ......+....+.+..
T Consensus 117 ~g~~~~~idp~~~~~e~~~~~~~ia~~~~s~~~~i~~~l~i~~~~~~~----------------~~~~~sv~~~~~~f~~ 180 (1032)
T KOG1178|consen 117 AGLTFLPIDPSWPNSELAGYLMRIAHFLTSVELEIVRRLNIIDILLNS----------------LFPKLSVETIADSFQM 180 (1032)
T ss_pred cceEEEEecCCCcccccchHHHhhhhhheeccceehhhhhhHHHHhhc----------------cccccchhhccchhhh
Confidence 9999999999999 33222222111110 1111111000000000 0000011111111111
Q ss_pred -cCCCCCCCCCCCCCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHhhhhhhcCCCCcEEEEecchhhHHhHHHHHHH
Q 043601 177 -SGNASNFPDVSVKQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTAMDQELAGALDYVTLCVLPMFHVFGLSFVVYA 255 (488)
Q Consensus 177 -~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (488)
....+...-...-++..+.+.||||+||.||+|..+|..+++. ..+....+.....+........+.........-.
T Consensus 181 ~~~~~~~r~~~~~~~ds~~~l~~tSgs~G~pk~v~~~~~sl~~~--fdw~~~~f~~t~s~~~~~~~~~~~~d~i~~~~~~ 258 (1032)
T KOG1178|consen 181 VLHNEDTREIRVGGNDSTALLSFTSGSTGVPKGVAGTHFSLANA--FDWMFTTFPPTGSDRFTFKTSVYFDDTIQKFIGA 258 (1032)
T ss_pred hhccCCCcceeeecccccceEeecccccccccccchhHHHHHhh--hhhccccCCcCccchhhhhheeecccchHHHHhh
Confidence 1110111122345677899999999999999999999999877 4444444445555554222222222222123334
Q ss_pred HhhCCceEEEcCC---CCHHHHHHHHHhcCccEEEecHHHHHHHHhcCCc----cC--------CCCCCCccEEEEccCC
Q 043601 256 QLQKGNCVVSMRK---FDLETALRAIEKYRVTHWWVVPPIILALAKNVSL----VK--------KFDLSSLKGIGSGAAP 320 (488)
Q Consensus 256 ~l~~G~~~~~~~~---~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~----~~--------~~~l~~lr~v~~~G~~ 320 (488)
.+..|+.+..+.. -++.++.+.+++++++..+.+|+..+.++..... .. ....+.|+....+||+
T Consensus 259 ~L~~~~~l~~p~~~~~~~~~~l~~~le~y~i~~~~~~~a~~~~l~~~~~~~~~~l~~~~~~~dl~~~~~~Lkl~~~~~ep 338 (1032)
T KOG1178|consen 259 LLFNGNNLLVPTATIKDTPGQLASTLERYGITVSHLLPAMCQLLLAILTTSLPLLEHAFSLSDLLTKRSCLKLVVLGGEP 338 (1032)
T ss_pred HhhcCceeecccccCccchhhHHHHHHhhhheeeeechhhhhhhhhhcCcchhhhhhhhhcccccccchhheeeeecCCc
Confidence 4555665665533 3479999999999999999999998887766221 00 1123479999999999
Q ss_pred CcHHHHHHHHhhCCCCeEEeccCcccccccccccCCCCC--CCCCCceeecCCC-------ceEEEEeCCCCCCCCCCCc
Q 043601 321 LRKELVEECSKNLPTVTVFQGYGMTETCGVVTVENPLLG--VQNSGSTGTLVAG-------VEAQIVCVDTLKPLPPNQV 391 (488)
Q Consensus 321 l~~~~~~~~~~~~~~~~i~~~YG~tE~~~~~~~~~~~~~--~~~~~~~g~~~~~-------~~~~i~d~~~~~~~~~g~~ 391 (488)
...++...+.+.+...-...-|++++............. ......++.+... ..+++.. ..+.+++.+..
T Consensus 339 ~~v~l~~s~~~~~~~~~~~~~y~s~~~~~~~s~~~~~~s~~ll~~~~v~~~p~~~~~~~~~~~~~~~~-~~~~~~~~~v~ 417 (1032)
T KOG1178|consen 339 LLVSLYTSTFDLLAEIFFGLPYLSTDPTGLVSYDDFSPSKVLLTNENVYSVPKFDSIIGSLTVLESLY-RAGGEGEGGVG 417 (1032)
T ss_pred cchhhhhhhhhcccceeeeecccCCCCccceeHHhhCcccceecceeEEeccchhhccCCCcceeeee-ccCcccCCccc
Confidence 999998866666543334445888887766554332111 1111111111111 1122222 23333333222
Q ss_pred ceEEE----------ec-------------------CCccccceEEEccCCcEEEEcccCcceeeCcEEe---eHhHHHh
Q 043601 392 GELWV----------RG-------------------PILMPGDLGYFDEHGQLFIVDRIKELIKCNGFQV---ELEGVLV 439 (488)
Q Consensus 392 Gel~v----------~g-------------------~~~~tGD~~~~~~~g~l~~~GR~~d~i~~~G~~v---~ie~~l~ 439 (488)
+.... .| ..|+|||.|+...+|.+.+.||.|++||.+|.++ +|+.++.
T Consensus 418 ~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~~r~y~tgD~gr~l~ng~l~~~GR~d~qIK~rG~Ri~L~ei~t~v~ 497 (1032)
T KOG1178|consen 418 KGCLGAEQNLSSWVVDGYSTPENFLPNFLTVDGVKARIYRTGDNGRSLKNGGLEISGRADRQIKDRGVRIELGELNTVVE 497 (1032)
T ss_pred ceeecccccccceeeccccchhhcCCcccccccchhhcccccccceeecCCCEEEEEeccceEEEccEEEehhhhchhhc
Confidence 21111 12 1478899999989999999999999999999999 9999999
Q ss_pred cCCCeeeeEEEeecCCCCCceEEEEEEeCCCCC-CCHHHHHHHHHhhcC
Q 043601 440 SHPEILDAVVIPFPDPEAGEVPIAYVVRSPNSS-LTKEDVQKFVANDSQ 487 (488)
Q Consensus 440 ~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~-~~~~~i~~~~~~~l~ 487 (488)
.+|.|.++.+....+...++.+.+||+.+.+.. ....+|+.++..+|+
T Consensus 498 ~~p~v~~~itl~~~~~~~~~~l~aFvv~~~~~~~~~~~~i~~~l~~~La 546 (1032)
T KOG1178|consen 498 VHPDVKEAITLARENSTVGQTLLAFVVERGGSKSVLIRDIRNYLKKELA 546 (1032)
T ss_pred cCcchhhhheeeeeccccCceEEEEEeccCCCCchhHHHHHHhhccccc
Confidence 999999999999988888999999999887643 335789999998886
No 129
>TIGR02304 aden_form_hyp probable adenylate-forming enzyme. Members of this family form a distinct clade within a larger family of proteins that also includes coenzyme F390 synthetase, an enzyme known in Methanobacterium thermoautotrophicum and a few other methanogenic archaea. That enzyme adenylates coenzyme F420 to F390, a reversible process, during oxygen stress. Other informative homologies include domains of the non-ribosomal peptide synthetases involved in activation by adenylation. The family defined by this model is likely to be of an adenylate-forming enzyme related to but distinct from coenzyme F390 synthetase.
Probab=99.75 E-value=3e-16 Score=151.30 Aligned_cols=245 Identities=13% Similarity=0.012 Sum_probs=157.9
Q ss_pred EEEEEcccCCCCCCchhhhccHHHHHHhhHHhhhhh-hcCCCCcEEEEe--cchhhHHhHHHHHHHHhhCCce-EEEcC-
Q 043601 193 TAALLYSSGTTGVGKGAILTHKNFIASSLMTAMDQE-LAGALDYVTLCV--LPMFHVFGLSFVVYAQLQKGNC-VVSMR- 267 (488)
Q Consensus 193 ~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~G~~-~~~~~- 267 (488)
-..+..||||||.|-.+..+................ .+...++.+... .+. +.+ ..+..... +...+
T Consensus 101 ~~~v~~TSGSSG~p~~f~~~~~~~~~~~a~~~~~~~~~g~~~g~r~a~~~~~~~-~ly-------~~~~~~~~~~~~~~l 172 (430)
T TIGR02304 101 NISVGLSSGTSGRRGLFVVSPEEQQMWAGGILAKVLPDGLFAKHRIAFFLRADN-NLY-------QSVNNRWISLDFFDL 172 (430)
T ss_pred cEEEEECCCCCCCceEEEECHHHHHHHHHHHHhhhCccccccCCcEEEEEccCh-hHH-------HHHHhccceeeecCC
Confidence 455778999999999999998876544222111111 122233333222 111 111 11111111 12221
Q ss_pred CCCHHHHHHHHHhcCccEEEecHHHHHHHHhcCCccCCCCCCCccEEEEccCCCcHHHHHHHHhhCCCCeEEeccCcccc
Q 043601 268 KFDLETALRAIEKYRVTHWWVVPPIILALAKNVSLVKKFDLSSLKGIGSGAAPLRKELVEECSKNLPTVTVFQGYGMTET 347 (488)
Q Consensus 268 ~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~i~~~YG~tE~ 347 (488)
..+.+.+++.|++++|+++.++|+.+..|++. ......+ .+++.++++||.++++.++.+.+.|+ +++++.||+||
T Consensus 173 ~~~~~~~l~~L~~~~P~~L~g~pS~l~~LA~~-~~~~~l~-~~~k~ii~~~E~l~~~~r~~Ie~~fg-~~V~~~YG~tE- 248 (430)
T TIGR02304 173 LAPFQAHIKRLNQRKPSIIVAPPSVLRALALE-VMEGELT-IKPKKVISVAEVLEPQDRELIRNVFK-NTVHQIYQATE- 248 (430)
T ss_pred CcCHHHHHHHHHHhCCCEEEEcHHHHHHHHHH-HHhcCCC-CCceEEEEccCCCCHHHHHHHHHHhC-CCeeEccCCch-
Confidence 14689999999999999999999999999987 3333333 47899999999999999999999997 99999999999
Q ss_pred cccccccCCCCCCCCCCceeecCCCceEE--EEeCCCCCCCCCCCcceEEEecC--------CccccceEEEccC----C
Q 043601 348 CGVVTVENPLLGVQNSGSTGTLVAGVEAQ--IVCVDTLKPLPPNQVGELWVRGP--------ILMPGDLGYFDEH----G 413 (488)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~--i~d~~~~~~~~~g~~Gel~v~g~--------~~~tGD~~~~~~~----g 413 (488)
|.+++.+. .+...---..+.++ ++|+ .++ +..+|++- .|.|||++.+.++ |
T Consensus 249 g~la~eC~-------~g~lHl~ed~~~vE~~ivD~-~~~-------~~~ViT~L~n~~~PlIRYrtGD~~~~~~~~C~CG 313 (430)
T TIGR02304 249 GFLASTCR-------CGTLHLNEDLVHIEKQYLDE-HKR-------FVPIITDFTRTTQPIVRYRLNDILVESEQPCSCG 313 (430)
T ss_pred hheEEecC-------CCCEEEccccEEEEeeEECC-CCc-------eEEEEecCCCccceEEeeeCCCEEEeCCCCCCCC
Confidence 55443321 22222222345555 7774 332 34577774 5889999888543 2
Q ss_pred ----cE-EEEcccCcceee---CcEEe-----eHhHH-HhcCCCeeeeEEEeecCCCCCceEEEEEEeC
Q 043601 414 ----QL-FIVDRIKELIKC---NGFQV-----ELEGV-LVSHPEILDAVVIPFPDPEAGEVPIAYVVRS 468 (488)
Q Consensus 414 ----~l-~~~GR~~d~i~~---~G~~v-----~ie~~-l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~ 468 (488)
.+ .+.||.+|++++ +|..+ .++.+ +...+.|.+..++-.. .+.+.+.++..
T Consensus 314 r~~~~i~~I~GR~dD~l~~~~~~G~~v~v~p~~~~~~i~~~~~~i~~yQi~Q~~----~~~l~v~~~~~ 378 (430)
T TIGR02304 314 SATMAIERIEGRQDDIFQLITRSGDEQTVFPDFIRRVILFTLPLIVEYRVLQTG----SAQLELIADCE 378 (430)
T ss_pred CcccccCCccCccCCEEEEecCCCCeEEeCHHHHHHHHHhcCCCCceEEEEEcc----CCeEEEEEEeC
Confidence 23 378999999985 45544 56776 4467899999887432 23566666653
No 130
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only]
Probab=99.69 E-value=2.5e-15 Score=150.85 Aligned_cols=422 Identities=19% Similarity=0.233 Sum_probs=279.6
Q ss_pred CHHHHHhhccccCCCceEEEeCCC-C--cceeHHHHHHHHHHHHH-HHHHcCCCCCCEEEEEcCCC--cchHHHHHHHHH
Q 043601 28 SMVHFLFRNSASYGSKSALIDADS-G--ESLTFSQFKSIVIKVSH-GFRHLGVTKHDVVLIFAPNS--IQFPICLLGVIA 101 (488)
Q Consensus 28 ~l~~~l~~~a~~~p~~~a~~~~~~-~--~~~Ty~el~~~~~~la~-~L~~~g~~~g~~V~i~~~n~--~~~~~~~lA~~~ 101 (488)
.+...++..-.+++..+|.++-++ | ..+||..+..++.+.|+ .|.+.|+.++|+|.++...+ .++++..++|..
T Consensus 95 d~~avl~~~~nhs~~~ta~i~id~kgk~~~~twdkl~~rA~k~a~~~l~ksgl~~~~~vvL~Y~~~e~ie~~isl~gc~l 174 (1363)
T KOG3628|consen 95 DIIAVLRYRRNHSATSTAHICIDKKGKATSITWDKLLNRAEKVAHVELNKSGLKPGDRVVLYYRKCEAIEFLISLFGCFL 174 (1363)
T ss_pred chHHHHHhhccCCCCCceEEEEcCCCceeeeeHHHHHHHHHhhccHHhhccCCCCCcEEEEEEEhhhhhHHhhhhccccc
Confidence 466777777788888899875432 3 68999999999999999 66777999999999988766 799999999999
Q ss_pred cCCeEeecCCCCCHHHHHHHHhhcCCeEEEEccccHHHHhccCCCeEEEcccCcccCCCCcCCCCccchHHHHhhcCCCC
Q 043601 102 IGGIATTANPVYTVSELSKQVKDSSPKLVVTVPELWERVKDFNIPAVLLGSNHIVSPRGLRSSSNIVYFDELIELSGNAS 181 (488)
Q Consensus 102 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (488)
.|.+.+|+.+..+.+++...++..+.+++++.............+.-.... -..++..++...... +
T Consensus 175 ~g~~~vp~~e~~s~~el~~i~~~~~~~~~l~t~a~~r~~~~~~~~~s~~k~---------v~~w~t~~~k~~~~~----~ 241 (1363)
T KOG3628|consen 175 LGIVAVPLSELSSSEELKDIVNPTPERVALTTEAGERAFINDNSPVSLAKA---------VAWWKTNDFKGNYTK----D 241 (1363)
T ss_pred cceeeccchhhhhhhhhhcccCCCccceEeehhhhHHHhhhccCcccHHHH---------HHhhhcccccceeeh----h
Confidence 999999999999999999999999999999987765544432211000000 001111111111111 1
Q ss_pred CCCCCCCCCCCEEEEEcccCCCCCCchhhhccHHHHHHhhH---------Hhhh---------hhhcCCCCcEEEEecch
Q 043601 182 NFPDVSVKQTDTAALLYSSGTTGVGKGAILTHKNFIASSLM---------TAMD---------QELAGALDYVTLCVLPM 243 (488)
Q Consensus 182 ~~~~~~~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~---------~~~~---------~~~~~~~~~~~~~~~~~ 243 (488)
....+..... ..+|-||.+++|.--+++.+|. +..+-.. .+.. ..+.....+.++....+
T Consensus 242 k~~~P~~~~~-~~~i~~t~s~l~~~~g~V~~~~-~~~q~r~~~~~~nt~Pa~~~~~~~~~~~~~v~~~~~~~~~l~~~~~ 319 (1363)
T KOG3628|consen 242 KIKKPRMQLP-YGYIEFTRSPLGNLIGVVYKHK-FLPQMRVLTSIPNTNPARFAAAFYGCLHAHVFPVPSEDVLLTNLDP 319 (1363)
T ss_pred hccCCceeee-eEEEEEeccchhceeeeEeecc-cccchhhhhhccCcChHHHHHhhhcchhhhccccCcccceeeccCc
Confidence 1112223333 8999999999999989988887 3332000 0000 01112355666777778
Q ss_pred hhHHhHHHHHHHHhhCCceEEEcCC---CCHHHHHHHHHhcCccEEEecHHHHHHHHhcCCcc----------CCCCCCC
Q 043601 244 FHVFGLSFVVYAQLQKGNCVVSMRK---FDLETALRAIEKYRVTHWWVVPPIILALAKNVSLV----------KKFDLSS 310 (488)
Q Consensus 244 ~~~~~~~~~~~~~l~~G~~~~~~~~---~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~----------~~~~l~~ 310 (488)
....|++.+++.++++|.|.+.++. ..|..+.+++-+++.+++..--..+......+.+. ...++++
T Consensus 320 s~~lGlilGV~~alfsg~c~i~~p~~~l~~pG~~~~l~~k~R~~~~ltd~~~Lkq~~~ny~~~p~a~~s~~k~~t~d~ss 399 (1363)
T KOG3628|consen 320 SQQLGLILGVLVALFSGYCTIGCPKEVLKPPGLIANLITKYRATWSLTDYAGLKQPVYNYQEDPKATLSFKKYKTPDLSS 399 (1363)
T ss_pred ccccchhhhhhhhhhcCceeecCchhhcCCCcchhhhhccceeEEEeecccccCcccccccCCcccccchhhccCCCccc
Confidence 8888999999999999999999987 67889999999999999876544444443333221 2256789
Q ss_pred ccEEEEccCCCcHHHHHHHHhhC----CCCe-----------------EEeccCcccccccccccCCCCC----------
Q 043601 311 LKGIGSGAAPLRKELVEECSKNL----PTVT-----------------VFQGYGMTETCGVVTVENPLLG---------- 359 (488)
Q Consensus 311 lr~v~~~G~~l~~~~~~~~~~~~----~~~~-----------------i~~~YG~tE~~~~~~~~~~~~~---------- 359 (488)
+|...+....+..+..+...++| +... ...+=+.+|.+......+....
T Consensus 400 lk~C~Vtc~~vd~~~~~ivs~~wlk~lg~~~~~~~~~p~l~ll~hGgi~is~k~~~~~~~~~~r~p~~~~~~~~~e~ll~ 479 (1363)
T KOG3628|consen 400 LKGCMVTCTAVDTEFQEIVSDRWLKPLGETNVKVVDFPILCLLWHGGIPISFKDWMEIGTVSIRRPEQMADTLPGEGLLS 479 (1363)
T ss_pred eeeeEEeeeecchHHHHHHHHhhcccccCcCcceeechhhhhhhcCceEEEeccchhhhcccccCcccccccCccceeee
Confidence 99999998888888765554443 2111 1122223444332222111000
Q ss_pred ------------------CCCCCceeecCC-CceEEEEeCCCCCCCCCCCcceEEEecC---------------------
Q 043601 360 ------------------VQNSGSTGTLVA-GVEAQIVCVDTLKPLPPNQVGELWVRGP--------------------- 399 (488)
Q Consensus 360 ------------------~~~~~~~g~~~~-~~~~~i~d~~~~~~~~~g~~Gel~v~g~--------------------- 399 (488)
......+|...| ++.+.++++++.+.|..+++|||||.++
T Consensus 480 ~~~L~~~~V~v~~e~~is~~s~kd~~~i~~g~~t~~vv~~~t~~LC~~~eVGEIwVsS~~~~~~~~al~~~t~~~F~~~~ 559 (1363)
T KOG3628|consen 480 KEALKLNEVEVDTEDDISSLSVKDVLCIMPGDATLAVVNPDTNQLCKTDEVGEIWVSSNSLGKLFYALDKQTENTFKATP 559 (1363)
T ss_pred ccccccceEEEcchhhhhhcCccccceecccceEEEEeCCCcccccccCcceeEEEecCCcccceeeccccccceEEeee
Confidence 001111244443 5677788888899999999999999875
Q ss_pred ------------CccccceEEEccCCcEEEEcccCccee-eCcEEe-------------eHhHHHhcCCCeeeeEEEeec
Q 043601 400 ------------ILMPGDLGYFDEHGQLFIVDRIKELIK-CNGFQV-------------ELEGVLVSHPEILDAVVIPFP 453 (488)
Q Consensus 400 ------------~~~tGD~~~~~~~g~l~~~GR~~d~i~-~~G~~v-------------~ie~~l~~~~~v~~~~v~~~~ 453 (488)
..+||=+|++++ |.++++|-++|.+. ..|.+. .++-+++..+.|-++.++-
T Consensus 560 ~~s~~~~~~n~~FmRtGLlGFv~~-gki~vl~~k~d~llq~~~~~h~~d~iv~thya~~~iktV~R~v~~VF~~saf~-- 636 (1363)
T KOG3628|consen 560 VESSGKPPSNVPFMRTGLLGFVHN-GKIYVLGLKEDGLLQVSGWRHNADDIVATHYAVELIKTVMRGVIAVFDVSAFE-- 636 (1363)
T ss_pred ccccCCCCccchhhhhcceeeeeC-CeEEEEEechhhhhhhhhhhhhhhhhHhhHHHHHHHHHHHhccceEEEEeeee--
Confidence 345699999965 45666665555544 466554 3456677778899999984
Q ss_pred CCCCCceEEEEEEeCCCC
Q 043601 454 DPEAGEVPIAYVVRSPNS 471 (488)
Q Consensus 454 ~~~~~~~~~~~v~~~~~~ 471 (488)
.|++.+.++-+|..
T Consensus 637 ----~E~~~Vv~~esP~a 650 (1363)
T KOG3628|consen 637 ----DEHIVVVVLESPDA 650 (1363)
T ss_pred ----cceEEEEEEeCcch
Confidence 34666666656653
No 131
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.32 E-value=5.8e-12 Score=118.93 Aligned_cols=83 Identities=19% Similarity=0.192 Sum_probs=75.8
Q ss_pred CCccccceEEE-ccCCcEEEEcccCcceeeCc---EEe--eHhHHHhcCCCeeeeEEEeecCCCCCceEEEEEEeCCCCC
Q 043601 399 PILMPGDLGYF-DEHGQLFIVDRIKELIKCNG---FQV--ELEGVLVSHPEILDAVVIPFPDPEAGEVPIAYVVRSPNSS 472 (488)
Q Consensus 399 ~~~~tGD~~~~-~~~g~l~~~GR~~d~i~~~G---~~v--~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~ 472 (488)
.|++|||+|++ |+||+++|.||.+ +| ++| +||+++.+||+|.+|+|++.+++.+++.++|+|++.+ .
T Consensus 209 gW~~TGDlg~~~d~dG~l~~~gR~~-----~G~~i~nV~p~IE~~L~~hp~V~eaaVvgvpd~~~ge~v~A~Vv~~~--~ 281 (365)
T PRK09188 209 IWLATGKKVYNFITRGLFSWSDGEG-----TGDRIDNEAPAIQAALKSDPAVSDVAIALFSLPAKGVGLYAFVEAEL--P 281 (365)
T ss_pred cEEeCCCEEEEEcCCCeEEEEecCc-----CCcCceeeCHHHHHHHHhCCCccEEEEEEEEcCCCCeEEEEEEEECC--C
Confidence 48999999998 7999999999998 78 688 9999999999999999999999999999999999874 4
Q ss_pred CCHHHHHHHHHhhcCC
Q 043601 473 LTKEDVQKFVANDSQL 488 (488)
Q Consensus 473 ~~~~~i~~~~~~~l~~ 488 (488)
.+.++|+++|+++|+.
T Consensus 282 ~~~~el~~~l~~~L~~ 297 (365)
T PRK09188 282 ADEKSLRARLAGAKPP 297 (365)
T ss_pred CCHHHHHHHHHhhchh
Confidence 6789999999999863
No 132
>PF04443 LuxE: Acyl-protein synthetase, LuxE; InterPro: IPR007534 LuxE is an acyl-protein synthetase found in bioluminescent bacteria. LuxE catalyses the formation of an acyl-protein thiolester from a fatty acid and a protein. This is the second step in the bioluminescent fatty acid reduction system, which converts tetradecanoic acid to the aldehyde substrate of the luciferase-catalysed bioluminescence reaction []. A conserved cysteine found at position 364 in Photobacterium phosphoreum LuxE (Q52100 from SWISSPROT) is thought to be acylated during the transfer of the acyl group from the synthetase subunit to the reductase. The C-terminal of the synthetase is though to act as a flexible arm to transfer acyl groups between the sites of activation and reduction []. A LuxE domain is also found in the Vibrio cholerae RBFN protein (Q06961 from SWISSPROT), which is involved in the biosynthesis of the O-antigen component 3-deoxy-L-glycero-tetronic acid. This entry represents the LuxE domain, which is found in archaeal and bacterial proteins.; GO: 0047474 long-chain fatty acid luciferin component ligase activity, 0008218 bioluminescence
Probab=99.32 E-value=1.1e-10 Score=110.26 Aligned_cols=226 Identities=18% Similarity=0.162 Sum_probs=137.2
Q ss_pred CCCCCEEEEEcccCCCCCCchhhhccHHHHHHhhH-H-hhhhhhcCCCCc-EEEEecchhh----HHhHHHHHHHHhhCC
Q 043601 188 VKQTDTAALLYSSGTTGVGKGAILTHKNFIASSLM-T-AMDQELAGALDY-VTLCVLPMFH----VFGLSFVVYAQLQKG 260 (488)
Q Consensus 188 ~~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~-~-~~~~~~~~~~~~-~~~~~~~~~~----~~~~~~~~~~~l~~G 260 (488)
...+++..++.||||||.|--+.+.+..+...... . ............ .++...|-.. ++......+..+..+
T Consensus 86 ~~~e~~~~~~tSSGTtG~~S~i~~D~~t~~~~~~~~~~~~~~~~~~~~~~~~il~l~p~~~~~~~~~~~~~~~~~~~~~~ 165 (365)
T PF04443_consen 86 VPEEEVEKVFTSSGTTGQPSRIFRDRETAERQQKSLNKIFQHFLGPSRLPMLILDLSPSPENRNSFSARYAGILGELFFG 165 (365)
T ss_pred cChhhheeEEECCCCCCCCcEEEECHHHHHHHHHHHHHHHHhhcccccCCeEEEEecCCcccccchHHHHHHHHhhcccC
Confidence 34567788999999999987777777666554222 1 112122222222 2233333221 111112233334455
Q ss_pred ceEEEc-CCCCHHHHHHHHH----hcCccEEEecHHHHHHHHhcCCcc-CCCCCC-CccEEEEcc------CCCc-HHHH
Q 043601 261 NCVVSM-RKFDLETALRAIE----KYRVTHWWVVPPIILALAKNVSLV-KKFDLS-SLKGIGSGA------APLR-KELV 326 (488)
Q Consensus 261 ~~~~~~-~~~~~~~~~~~l~----~~~~t~l~~~p~~~~~l~~~~~~~-~~~~l~-~lr~v~~~G------~~l~-~~~~ 326 (488)
+...+- ..++.+.+++.+. +.++..++++|.++..++..+... ....++ ..+.+-.|| +.++ +++.
T Consensus 166 ~~~~l~~~~ld~~~~~~~L~~~~~~~~pv~l~Gftf~~~~~~~~l~~~~~~~~L~~~s~vi~~GGwK~~~~e~v~r~ef~ 245 (365)
T PF04443_consen 166 SRFALDNDELDLEGLIEALFRAEHSGEPVLLFGFTFFIWFLLDELEERGIRFRLPKGSIVIHGGGWKGRRKEAVSREEFY 245 (365)
T ss_pred ceeeecCCccCHHHHHHHHHHHHhCCCCEEEECchHHHHHHHHHHHhcCCcccCCCCCEEEeCCCCCccccCccCHHHHH
Confidence 554442 2356766666554 567899999999777666542222 123444 355555555 5564 6777
Q ss_pred HHHHhhCCC---CeEEeccCcccccccccccCCCCCCCCCCceeecCCCceEEEEeCCCCCCCCCCCcceEEEecC----
Q 043601 327 EECSKNLPT---VTVFQGYGMTETCGVVTVENPLLGVQNSGSTGTLVAGVEAQIVCVDTLKPLPPNQVGELWVRGP---- 399 (488)
Q Consensus 327 ~~~~~~~~~---~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~---- 399 (488)
+.+.+.|+- -++++.||+||.....+.+... ... ..++ +.+.|+++.++++.|+.|-|.+-.+
T Consensus 246 ~~l~~~~Gv~~~~~i~~~ygmtEl~s~~~~~~~~-------~~~-~p~w--V~iRDp~tl~~~~~Ge~Gli~vidl~~~s 315 (365)
T PF04443_consen 246 ARLQEVFGVIPIENIYDMYGMTELNSQAYECGHG-------HFH-VPPW--VIIRDPETLEPLPPGETGLIQVIDLANTS 315 (365)
T ss_pred HHHHHHHCCCCHHHeeeeeeccccchhheeCCCC-------ccc-CCCe--EEEECCCCCcCCCCCCeeEEEEEcccccC
Confidence 888888872 3899999999987554433211 111 1234 6677999999999999999988654
Q ss_pred ---CccccceEEEccC--------CcEEEEcccCc
Q 043601 400 ---ILMPGDLGYFDEH--------GQLFIVDRIKE 423 (488)
Q Consensus 400 ---~~~tGD~~~~~~~--------g~l~~~GR~~d 423 (488)
.+.|.|+|.++.+ .++.++||.+.
T Consensus 316 ~p~~IlTeDlGvl~~~~~c~cr~g~~f~vlGR~~~ 350 (365)
T PF04443_consen 316 YPGFILTEDLGVLHGDDDCGCRKGKYFEVLGRADG 350 (365)
T ss_pred CCcEEEEcceeeecCCCCCCCccCCEEEEEeCCCC
Confidence 3678999988654 27899999774
No 133
>PF03321 GH3: GH3 auxin-responsive promoter; InterPro: IPR004993 Transcription of the gene family, GH3, has been shown to be specifically induced by the plant hormone auxin. The auxin-responsive GH3 gene promoter is composed of multiple auxin response elements (AuxREs), and each AuxRE contributes incrementally to the strong auxin inducibility to the promoter.; PDB: 4EPL_A 4EQ4_B 4EWV_B 4EQL_B 4EPM_A.
Probab=98.83 E-value=1e-08 Score=102.74 Aligned_cols=172 Identities=15% Similarity=0.140 Sum_probs=99.8
Q ss_pred CCCccEEEEccCCCcHHHHHHHHhhCCCCeEE-eccCcccccccccccCCCCCCCCCCceeecCCCceEEEEeCCCC---
Q 043601 308 LSSLKGIGSGAAPLRKELVEECSKNLPTVTVF-QGYGMTETCGVVTVENPLLGVQNSGSTGTLVAGVEAQIVCVDTL--- 383 (488)
Q Consensus 308 l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~i~-~~YG~tE~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d~~~~--- 383 (488)
+++|+.+.+.+..-...-.+++++.+|++.+. ..|++||. ++..+.. .......-.|-.+ .++.++.++.
T Consensus 266 WP~L~~v~~~~~g~~~~y~~~l~~~~g~~~~~~~~y~ASEg--~i~i~~~---~~~~~~~l~~~~~-ffEFip~~~~~~~ 339 (528)
T PF03321_consen 266 WPNLKLVSCWGGGSMAPYAPKLREYFGGVPIQSKGYGASEG--FIGIPLD---PEDPGYVLAPDSG-FFEFIPVDEDEQN 339 (528)
T ss_dssp STT--EEEEE-SGGGGGGHHHHHHHHTTS-EEE-EEEETTE--EEEEES----CCC--EEE-TTSS-EEEEEE-STT---
T ss_pred CCCCcEEEEEcCCChHHHHHHHHHHcCCCceeeccccccce--EEEEecC---CCCCceEeecCCe-EEEEEeccCCccc
Confidence 68999777666555556677888888765444 68999995 3333321 1111122222223 5666664432
Q ss_pred ----------CCCCCCCcceEEEecC----CccccceEEEcc--CC--cEEEEcccCcceeeCcEEe---eHhHHHhcC-
Q 043601 384 ----------KPLPPNQVGELWVRGP----ILMPGDLGYFDE--HG--QLFIVDRIKELIKCNGFQV---ELEGVLVSH- 441 (488)
Q Consensus 384 ----------~~~~~g~~Gel~v~g~----~~~tGD~~~~~~--~g--~l~~~GR~~d~i~~~G~~v---~ie~~l~~~- 441 (488)
.++..|+.-||+++.. .|+.||++++.. ++ .+.|+||.+.++++.|+++ +++.++.+.
T Consensus 340 ~~~~~~~l~~~ele~G~~YelviTt~~GLyRY~iGDvVrv~gf~~~~P~i~F~~R~~~~l~l~gEkl~e~~v~~av~~~~ 419 (528)
T PF03321_consen 340 PSEQPKTLLLHELEVGEEYELVITTNSGLYRYRIGDVVRVTGFYNQTPRIEFVGRRGQVLSLFGEKLSEEQVQEAVARAL 419 (528)
T ss_dssp ----SSSEEGGG--TT-EEEEEEESTTS-SSEEECEEEEEEEEETTEEEEEEEEETTEEE-SSS--EEHHHHHHHHHHHH
T ss_pred ccCCCceecHHHhcCCCeEEEEEecccceeeeecCCEEEEeeccCCCcEEEEeccCCceeecceeecCHHHHHHHHHHHH
Confidence 2346788889999975 588899998842 34 7999999999999999999 666666543
Q ss_pred ----CCeeeeEEEeecCCCCCceEEEEEEeCCCCCCCHHHHHHHHHhhc
Q 043601 442 ----PEILDAVVIPFPDPEAGEVPIAYVVRSPNSSLTKEDVQKFVANDS 486 (488)
Q Consensus 442 ----~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~~~~~~l 486 (488)
-.+.+..+............+.++.++.. ..+.+++.+.+.+.|
T Consensus 420 ~~~~~~~~~f~~~~~~~~~~~~~Y~~~~e~~~~-~~~~~~~~~~lD~~L 467 (528)
T PF03321_consen 420 QETGLELRDFTVAPDPSSGNPPHYVLFWELEGE-PDDLEELAKALDESL 467 (528)
T ss_dssp HCTT-EEEEEEEEEE--SSSSBEEEEEEEECS--HHHHHHHHHHHHHCS
T ss_pred HhcCCceeeEEEEeecccCCCCceEEEEEeCCC-chHHHHHHHHHHHHh
Confidence 33677777766433334467777777654 224456666666655
No 134
>PLN02249 indole-3-acetic acid-amido synthetase
Probab=98.25 E-value=0.00023 Score=71.97 Aligned_cols=152 Identities=10% Similarity=0.020 Sum_probs=90.1
Q ss_pred CCC---ccEEEEccCCCcHHHHHHHHhhCCCC-eEEeccCcccccccccccCCCCCCCCCCceeec--CCCceEEEEeCC
Q 043601 308 LSS---LKGIGSGAAPLRKELVEECSKNLPTV-TVFQGYGMTETCGVVTVENPLLGVQNSGSTGTL--VAGVEAQIVCVD 381 (488)
Q Consensus 308 l~~---lr~v~~~G~~l~~~~~~~~~~~~~~~-~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~g~~--~~~~~~~i~d~~ 381 (488)
+++ +..++.||.. .-+..++..+|+. .+...|++||+- +..+... ...+..++.. ..+..++.++.+
T Consensus 301 WPnl~~i~~~~~G~~~---~Y~~~l~~~~g~~~~~~~~Y~ASEg~--~gi~~~~--~~~p~~~~~~l~~~~~ffEFiP~~ 373 (597)
T PLN02249 301 WPNTKYLDVIVTGAMA---QYIPMLEYYSGGLPMASTIYASSESY--FGINLNP--MCKPSEVSYTIMPNMAYFEFLPHN 373 (597)
T ss_pred CCCCCeEEEEecCChH---HHHHHHHHHcCCCccccccccccceE--EEeecCC--CCCCCCcceEecCCcEEEEeeecc
Confidence 567 5566666633 5567777777654 455789999953 3332210 0111111111 235666666422
Q ss_pred C-C------------CCCCCCCcceEEEecC----CccccceEEEcc----CCcEEEEcccCcceeeCcEEe---eHhHH
Q 043601 382 T-L------------KPLPPNQVGELWVRGP----ILMPGDLGYFDE----HGQLFIVDRIKELIKCNGFQV---ELEGV 437 (488)
Q Consensus 382 ~-~------------~~~~~g~~Gel~v~g~----~~~tGD~~~~~~----~g~l~~~GR~~d~i~~~G~~v---~ie~~ 437 (488)
+ + ..+..|+.=+|+|+.. .|+.||+.++.. --.+.|+||.+.++++.|+++ +++.+
T Consensus 374 ~~~~~~~~~~~~v~l~eVe~G~~Y~lVvTT~~GLyRY~iGDvVrvtgf~~~~P~i~F~gR~~~~ls~~GEKl~e~~v~~A 453 (597)
T PLN02249 374 HDGDGALDETSLVELADVEVGKEYELVITTYAGLYRYRVGDILRVTGFHNSAPQFKFIRRKNVLLSIESDKTDEADLQKA 453 (597)
T ss_pred cCCcccCCCCcEecHHHcCCCCeEEEEEEcccceeEeecCCEEEEeeccCCCcEEEEEccCCcceecccccCCHHHHHHH
Confidence 1 1 2345677779999864 588899998842 347899999999999999999 66665
Q ss_pred Hhc-------C-CCeeeeEEEeecCCCCCceEEEEEEe
Q 043601 438 LVS-------H-PEILDAVVIPFPDPEAGEVPIAYVVR 467 (488)
Q Consensus 438 l~~-------~-~~v~~~~v~~~~~~~~~~~~~~~v~~ 467 (488)
+.+ + -.|.|..++.... ......++++..
T Consensus 454 v~~a~~~~~~~~~~v~eft~~~~~~-~~p~Hyvl~wei 490 (597)
T PLN02249 454 VENASRLLAEQGTRVIEYTSYAETK-TIPGHYVIYWEL 490 (597)
T ss_pred HHHHHHHhhhcCceEEEeEEecCCC-CCCCceEEEEEE
Confidence 554 1 2356667744322 212344555555
No 135
>PF13193 AMP-binding_C: AMP-binding enzyme C-terminal domain; PDB: 3L8C_B 2VSQ_A 3R44_A 3RG2_B 3A9U_A 3A9V_A 3NI2_A 1V26_B 1ULT_B 1V25_B ....
Probab=98.23 E-value=1.9e-06 Score=61.69 Aligned_cols=50 Identities=32% Similarity=0.565 Sum_probs=45.3
Q ss_pred eHhHHHhcCCCeeeeEEEeecCCCCCceEEEEEEeCCCCCCCHHHHHHHHHhhcCC
Q 043601 433 ELEGVLVSHPEILDAVVIPFPDPEAGEVPIAYVVRSPNSSLTKEDVQKFVANDSQL 488 (488)
Q Consensus 433 ~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~~~~~~l~~ 488 (488)
|||+++.+||+|.+++|++.+++.+|+.++++|++ +.++|+++++++|+.
T Consensus 1 EIE~~l~~~~~V~~~~V~~~~d~~~g~~l~a~vv~------~~~~i~~~~~~~l~~ 50 (73)
T PF13193_consen 1 EIESVLRQHPGVAEAAVVGVPDEDWGERLVAFVVL------DEEEIRDHLRDKLPP 50 (73)
T ss_dssp HHHHHHHTSTTEEEEEEEEEEETTTEEEEEEEEEE------HHHHHHHHHHHHS-G
T ss_pred CHHHHHhcCCCccEEEEEEEEcccccccceeEEEe------eecccccchhhhCCC
Confidence 68999999999999999999998899999999998 559999999999863
No 136
>PLN02620 indole-3-acetic acid-amido synthetase
Probab=98.17 E-value=0.00087 Score=67.24 Aligned_cols=129 Identities=14% Similarity=0.032 Sum_probs=80.9
Q ss_pred CCCCccEEEEccCCCcHHHHHHHHhhCCCCeEEe-ccCcccccccccccCCCCCCCCCCce-eecCCC-ceEEEEeCCC-
Q 043601 307 DLSSLKGIGSGAAPLRKELVEECSKNLPTVTVFQ-GYGMTETCGVVTVENPLLGVQNSGST-GTLVAG-VEAQIVCVDT- 382 (488)
Q Consensus 307 ~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~i~~-~YG~tE~~~~~~~~~~~~~~~~~~~~-g~~~~~-~~~~i~d~~~- 382 (488)
-+++++.+.+....-...-...++..++++.+.. .|++||+-..+-..+ . .++..+ +...|+ ..++.++.+.
T Consensus 302 LWP~lk~I~~~~tGsm~~Y~p~L~~y~gglpl~~~~Y~ASE~~~ginl~P-~---~~p~~~sy~L~p~~~yFEFip~~~~ 377 (612)
T PLN02620 302 LWPNTKYVDVIVTGTMSQYIPTLDYYSNGLPLVCTMYASSECYFGVNLNP-L---CKPSEVSYTLIPTMAYFEFLPVHRN 377 (612)
T ss_pred hCCCCcEEEEECCCCHHHHHHHHHHHcCCCccccccccccceEEEeccCC-C---CCcccceeeecCCcEEEEEeeccCc
Confidence 3578887776555556666677777777776665 799999643222222 1 112212 222232 2334443221
Q ss_pred ------------------C-----CCCCCCCcceEEEecC----CccccceEEEc----cCCcEEEEcccCcceeeCcEE
Q 043601 383 ------------------L-----KPLPPNQVGELWVRGP----ILMPGDLGYFD----EHGQLFIVDRIKELIKCNGFQ 431 (488)
Q Consensus 383 ------------------~-----~~~~~g~~Gel~v~g~----~~~tGD~~~~~----~~g~l~~~GR~~d~i~~~G~~ 431 (488)
+ ..+..|+.=||+|+.. .|+.||+.++. ..-.+.|++|.+-+..+.|++
T Consensus 378 ~~~~~~~~~~~~~~~~~~~~~v~l~ev~~G~~YelvvTt~~GLyRYrlGDvv~V~Gf~n~~P~~~Fv~R~~~~lsi~gEK 457 (612)
T PLN02620 378 NGVTNSISLPKSLNEKEQQELVDLVDVKLGQEYELVVTTYAGLYRYRVGDVLRVAGFKNKAPQFSFICRKNVVLSIDSDK 457 (612)
T ss_pred ccccccccccccccccccCccccHHHccCCCeEEEEEEecCceEEEecCCEEEEeeecCCCceEEEEeecCceeeccccc
Confidence 1 1246778889999865 58889998773 345799999999999999999
Q ss_pred e---eHhHHHh
Q 043601 432 V---ELEGVLV 439 (488)
Q Consensus 432 v---~ie~~l~ 439 (488)
+ ++..++.
T Consensus 458 ~tE~~l~~Av~ 468 (612)
T PLN02620 458 TDEVELQNAVK 468 (612)
T ss_pred CCHHHHHHHHH
Confidence 9 5544444
No 137
>PLN02247 indole-3-acetic acid-amido synthetase
Probab=98.15 E-value=0.0003 Score=70.60 Aligned_cols=130 Identities=15% Similarity=0.072 Sum_probs=83.2
Q ss_pred CCCCccEEEEccCCCcHHHHHHHHhhCCCCeEEe-ccCcccccccccccCCCCCCCCCC-ceeecCCC-ceEEEEeCCCC
Q 043601 307 DLSSLKGIGSGAAPLRKELVEECSKNLPTVTVFQ-GYGMTETCGVVTVENPLLGVQNSG-STGTLVAG-VEAQIVCVDTL 383 (488)
Q Consensus 307 ~l~~lr~v~~~G~~l~~~~~~~~~~~~~~~~i~~-~YG~tE~~~~~~~~~~~~~~~~~~-~~g~~~~~-~~~~i~d~~~~ 383 (488)
-+++++.|.+....-...-...++..++++.++. .|++||+-..+-.. +. ..+. ..+...|+ ..++.++.+++
T Consensus 291 LWP~lk~I~~~~tGsm~~Y~~~L~~y~gglpl~s~~Y~sSE~~~ginl~-p~---~~p~~~sy~L~p~~~yFEFip~~~~ 366 (606)
T PLN02247 291 LWPRTKYIEVIVTGSMAQYIPTLEFYSGGLPLVSTMYASSECYFGINLK-PL---SDPSDVSYTLLPNMAYFEFLPVDKN 366 (606)
T ss_pred hCCCCcEEEEECCCCHHHHHHHHHHHcCCCceecccccccceEEEeccC-cC---CCccCCceeecCCcEEEEEeecCCC
Confidence 3578887777555556667778877777777665 89999964322222 11 1111 12222332 23445532222
Q ss_pred C-----------------------------CCCCCCcceEEEecC----CccccceEEEc----cCCcEEEEcccCccee
Q 043601 384 K-----------------------------PLPPNQVGELWVRGP----ILMPGDLGYFD----EHGQLFIVDRIKELIK 426 (488)
Q Consensus 384 ~-----------------------------~~~~g~~Gel~v~g~----~~~tGD~~~~~----~~g~l~~~GR~~d~i~ 426 (488)
. .+..|+.=||+|+.. .|+.||+.++. ..-.+.|++|.+.+..
T Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~evk~G~~YelVvTt~~GLYRYrlGDvv~V~GF~n~~P~~~Fv~R~~~vls 446 (606)
T PLN02247 367 NGEVIHFVQCNGTDDDDDALKEDLEIVDLVDVKVGHYYELVVTTFTGLYRYRVGDILMVTGFYNNAPQFRFVQRRNVVLS 446 (606)
T ss_pred cccccccccccccccccccccccCceecHHHccCCCeEEEEEEecCceEEEecCCEEEEeeecCCCceEEEEecCCceee
Confidence 1 346777789999865 58889998773 4457999999999999
Q ss_pred eCcEEe---eHhHHHhc
Q 043601 427 CNGFQV---ELEGVLVS 440 (488)
Q Consensus 427 ~~G~~v---~ie~~l~~ 440 (488)
+.|+++ ++..++.+
T Consensus 447 i~gEK~tE~~l~~Av~~ 463 (606)
T PLN02247 447 IDTDKTNEEDLLKAVTQ 463 (606)
T ss_pred cccccCCHHHHHHHHHH
Confidence 999999 55554443
No 138
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=94.50 E-value=0.3 Score=47.31 Aligned_cols=88 Identities=15% Similarity=0.060 Sum_probs=72.3
Q ss_pred cceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCC--cchHHHHHHHHHcCCeEeecCCCCCHHHHHHHHhhcCCeEE
Q 043601 53 ESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNS--IQFPICLLGVIAIGGIATTANPVYTVSELSKQVKDSSPKLV 130 (488)
Q Consensus 53 ~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~--~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~v 130 (488)
.-+|+.+...-+..+|+.|...|..+||+|.....-+ ..-+-..+|+.++|+.++|+.+. ..+....++++.++.+|
T Consensus 108 ~~~t~~D~~~wa~~~aR~~~~~g~~~gd~v~~~~~yGl~tgg~~~~~ga~rig~~vip~~~g-~~~~~~~l~~df~~tvI 186 (438)
T COG1541 108 FGYTAKDIERWAELLARSLYSAGVRKGDKVQNAYGYGLFTGGLGLHYGAERIGATVIPISGG-NTERQLELMKDFKPTVI 186 (438)
T ss_pred eecCHHHHHHHHHHHHHHHHHccCCCCCEEEEEeeeccccCCchhHHHHHhhCEEEEccCCc-cHHHHHHHHHhcCCcEE
Confidence 3589999999999999999999999999998866511 11267888999999999999873 34556789999999999
Q ss_pred EEccccHHHHh
Q 043601 131 VTVPELWERVK 141 (488)
Q Consensus 131 i~~~~~~~~~~ 141 (488)
.+.+.+.-.+.
T Consensus 187 ~~tps~~l~la 197 (438)
T COG1541 187 AATPSYLLYLA 197 (438)
T ss_pred EEChHHHHHHH
Confidence 99988766554
No 139
>PF14535 AMP-binding_C_2: AMP-binding enzyme C-terminal domain; PDB: 2Y27_A 2Y4N_A 3QOV_B 3S89_D 3LAX_A 2Y4O_B.
Probab=90.49 E-value=0.76 Score=34.55 Aligned_cols=42 Identities=21% Similarity=0.276 Sum_probs=33.3
Q ss_pred cEEe---eHhHHHhcCCCee-eeEEEeecCCCCCceEEEEEEeCCCC
Q 043601 429 GFQV---ELEGVLVSHPEIL-DAVVIPFPDPEAGEVPIAYVVRSPNS 471 (488)
Q Consensus 429 G~~v---~ie~~l~~~~~v~-~~~v~~~~~~~~~~~~~~~v~~~~~~ 471 (488)
|.+| .||+++.++|++. +..++.... ...+.+.+.|..+++.
T Consensus 1 GvnvfP~~Ie~vl~~~~~~~~~y~i~v~~~-~~~D~l~v~vE~~~~~ 46 (96)
T PF14535_consen 1 GVNVFPSQIEEVLREFPEVSPEYQIVVTRE-GGLDELTVRVELRPGF 46 (96)
T ss_dssp TEEE-HHHHHHHHCTSTTEEEEEEEEEEEE-TTEEEEEEEEEESTTC
T ss_pred CcEECHHHHHHHHHhCcCCCCcEEEEEEcC-CCCcEEEEEEEECCcc
Confidence 6778 9999999999999 666665544 4677888999998864
No 140
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=86.40 E-value=6.5 Score=39.18 Aligned_cols=81 Identities=17% Similarity=0.146 Sum_probs=61.3
Q ss_pred cceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcc--hHHHHHHHHHcCCeEeecCCCCCHHHHHHHHhhcCCeEE
Q 043601 53 ESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQ--FPICLLGVIAIGGIATTANPVYTVSELSKQVKDSSPKLV 130 (488)
Q Consensus 53 ~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~--~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~v 130 (488)
..+|.+++...+...+..+...|+++||++.+..+.+.. .....+++...|+..+|... ......+++..++..+
T Consensus 104 v~~T~~dl~~~~~~~~r~~~~~G~~~gD~vl~~~~~~~~~g~~~~~~~~~~~Ga~vi~~~~---~~~~~~~i~~~~~t~l 180 (445)
T TIGR03335 104 FFLTWDDWKRYAEKYARSFVSQGFTAGDRMVICASYGMNVGANTMTLAAREVGMSIIPEGK---CTFPIRIIESYRPTGI 180 (445)
T ss_pred eeecHHHHHHHHHHHHHHHHHcCCCCCCeEEEEecCCcchhHHHHHHHHHHcCCEEEcCCc---hhHHHHHHHHhCCCEE
Confidence 457999999888888888888899999999998776543 23445778899998877643 2345678888999988
Q ss_pred EEcccc
Q 043601 131 VTVPEL 136 (488)
Q Consensus 131 i~~~~~ 136 (488)
+.....
T Consensus 181 ~~~ps~ 186 (445)
T TIGR03335 181 VASVFK 186 (445)
T ss_pred EECHHH
Confidence 765444
No 141
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=86.02 E-value=6.3 Score=38.94 Aligned_cols=87 Identities=11% Similarity=0.096 Sum_probs=65.5
Q ss_pred cceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCc--chHHHHHHHHHcCCeEeecCCCCCHHHHHHHHhhcCCeEE
Q 043601 53 ESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSI--QFPICLLGVIAIGGIATTANPVYTVSELSKQVKDSSPKLV 130 (488)
Q Consensus 53 ~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~v 130 (488)
-.+|..++......++..+...|+++||++....+... ......++....|+..+++++.. .+.+...++..++.++
T Consensus 93 v~~t~~~~~~~~~~~~~~~~~~g~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~i~~~~~t~l 171 (422)
T TIGR02155 93 VGYTQNDIDTWSSVVARSIRAAGGRPGDLIHNAYGYGLFTGGLGAHYGAEKLGCTVVPISGGQ-TEKQVQLIQDFKPDII 171 (422)
T ss_pred eccCHHHHHHHHHHHHHHHHHcCCCCCcEEEEccCccccchhHHHHHHHHHcCcEEEecCCCC-HHHHHHHHHHHCCCEE
Confidence 34688888777777777788889999999887665443 22234567888999999887654 5778889999999999
Q ss_pred EEccccHHHH
Q 043601 131 VTVPELWERV 140 (488)
Q Consensus 131 i~~~~~~~~~ 140 (488)
+..+.....+
T Consensus 172 ~~~Ps~l~~L 181 (422)
T TIGR02155 172 MVTPSYMLNL 181 (422)
T ss_pred EEcHHHHHHH
Confidence 9887765544
No 142
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=75.04 E-value=27 Score=35.35 Aligned_cols=85 Identities=18% Similarity=0.210 Sum_probs=64.1
Q ss_pred cceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCc--chHHHHHHHHHcCCeEeecCCCCCHHHHHHHHhhcCCeEE
Q 043601 53 ESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSI--QFPICLLGVIAIGGIATTANPVYTVSELSKQVKDSSPKLV 130 (488)
Q Consensus 53 ~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~v 130 (488)
..+|++.+...+..+... .++++++++....|-.. .+...+++++..|+.+++. +..+.+.+...+++.++.++
T Consensus 184 v~~s~~~l~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~-~~~~~~~~~~~i~~~~~t~~ 259 (513)
T PRK07656 184 AMLTHRQLLSNAADWAEY---LGLTEGDRYLAANPFFHVFGYKAGVNAPLMRGATILPL-PVFDPDEVFRLIETERITVL 259 (513)
T ss_pred EEEecHHHHHHHHHHHHh---hCCCCCCeEEEccchHHHHHHHHHHHHHHHcCceEEec-CcCCHHHHHHHHHHhCCeEE
Confidence 468999887666554433 37889999988777543 3345678899999988775 56788899999999999999
Q ss_pred EEccccHHHHh
Q 043601 131 VTVPELWERVK 141 (488)
Q Consensus 131 i~~~~~~~~~~ 141 (488)
+..+.....+.
T Consensus 260 ~~~p~~~~~l~ 270 (513)
T PRK07656 260 PGPPTMYNSLL 270 (513)
T ss_pred echHHHHHHHH
Confidence 88777666554
No 143
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=74.49 E-value=35 Score=34.49 Aligned_cols=85 Identities=14% Similarity=0.178 Sum_probs=64.0
Q ss_pred cceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcch-HHHHHHHHHcCCeEeecCCCCCHHHHHHHHhhcCCeEEE
Q 043601 53 ESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQF-PICLLGVIAIGGIATTANPVYTVSELSKQVKDSSPKLVV 131 (488)
Q Consensus 53 ~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~-~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi 131 (488)
..+|++.+...+..... ..++++++++....|-...+ +...++++..|+..+..+.. +...+...+++.++..++
T Consensus 185 v~~t~~~l~~~~~~~~~---~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~G~~~v~~~~~-~~~~~~~~l~~~~~t~l~ 260 (521)
T PRK06187 185 VVLSHRNLFLHSLAVCA---WLKLSRDDVYLVIVPMFHVHAWGLPYLALMAGAKQVIPRRF-DPENLLDLIETERVTFFF 260 (521)
T ss_pred EEeehHHHHHHHHHHHH---hhCCCCCCEEEEeCCchHHhhHHHHHHHHHhCCEEEecCCC-CHHHHHHHHHHhCCeEEE
Confidence 46899988876665544 45788999998887755322 33445588889988877664 888999999999999999
Q ss_pred EccccHHHHh
Q 043601 132 TVPELWERVK 141 (488)
Q Consensus 132 ~~~~~~~~~~ 141 (488)
+.+.....+.
T Consensus 261 ~~p~~~~~l~ 270 (521)
T PRK06187 261 AVPTIWQMLL 270 (521)
T ss_pred chHHHHHHHH
Confidence 9877766554
No 144
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=71.61 E-value=28 Score=28.08 Aligned_cols=94 Identities=13% Similarity=0.043 Sum_probs=56.3
Q ss_pred hhHHhHHHHHHHHhhCCceEEEcCC-CCHHHHHHHHHhcCccEEEecH------HHHHHHHhcCCccCCCCCCCccEEEE
Q 043601 244 FHVFGLSFVVYAQLQKGNCVVSMRK-FDLETALRAIEKYRVTHWWVVP------PIILALAKNVSLVKKFDLSSLKGIGS 316 (488)
Q Consensus 244 ~~~~~~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~l~~~~~t~l~~~p------~~~~~l~~~~~~~~~~~l~~lr~v~~ 316 (488)
.|..|........-..|-.++.... ..++++.+.+.+.+++++..+- ..+..+.+. .....++.+ .++.
T Consensus 15 ~H~lG~~iv~~~lr~~G~eVi~LG~~vp~e~i~~~a~~~~~d~V~lS~~~~~~~~~~~~~~~~---L~~~~~~~~-~i~v 90 (137)
T PRK02261 15 CHAVGNKILDRALTEAGFEVINLGVMTSQEEFIDAAIETDADAILVSSLYGHGEIDCRGLREK---CIEAGLGDI-LLYV 90 (137)
T ss_pred hhHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcCccccCHHHHHHHHHH---HHhcCCCCC-eEEE
Confidence 5666765555555678888888864 6789999999999999987653 223333332 112234445 3666
Q ss_pred ccCCC-c----HHHHHHHHhhCCCCeEEeccCcc
Q 043601 317 GAAPL-R----KELVEECSKNLPTVTVFQGYGMT 345 (488)
Q Consensus 317 ~G~~l-~----~~~~~~~~~~~~~~~i~~~YG~t 345 (488)
||... + .+..+++++. + +-..|+..
T Consensus 91 GG~~~~~~~~~~~~~~~l~~~--G--~~~vf~~~ 120 (137)
T PRK02261 91 GGNLVVGKHDFEEVEKKFKEM--G--FDRVFPPG 120 (137)
T ss_pred ECCCCCCccChHHHHHHHHHc--C--CCEEECcC
Confidence 66543 3 3444555553 2 33456533
No 145
>TIGR03089 conserved hypothetical protein TIGR03089. This protein family is found, so far, only in the Actinobacteria (Streptomyces, Mycobacterium, Corynebacterium, Nocardia, Propionibacterium, etc.) and never more than one to a genome. Members show twilight-level sequence similarity to family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=70.70 E-value=34 Score=30.41 Aligned_cols=54 Identities=22% Similarity=0.220 Sum_probs=43.6
Q ss_pred HHcCCCCCCEEEEEcCCCc--chHHHHHHHHHcCCeEeecCCCCCHHHHHHHHhhcCC
Q 043601 72 RHLGVTKHDVVLIFAPNSI--QFPICLLGVIAIGGIATTANPVYTVSELSKQVKDSSP 127 (488)
Q Consensus 72 ~~~g~~~g~~V~i~~~n~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~ 127 (488)
...|++++|++. ..|-.. -....+++++..|+..+.+ ++++++.+-..+++.++
T Consensus 171 ~~~~l~~~D~~l-~~Pl~H~~gl~~~~~~~l~~G~t~v~~-~rFd~~~~l~~i~~~~v 226 (227)
T TIGR03089 171 RAAGLPPGDRVL-VLAWTDLEDFLATLLAPLAAGGSLVLV-THPDPARLDQIAETERV 226 (227)
T ss_pred hhcCCCCCCeEE-ecCCCchHHHHHHHHHHhccCceEEEe-cCCCHHHHHHHHHhhcC
Confidence 556889999999 888665 3345689999999998887 68999998888888765
No 146
>PRK08315 AMP-binding domain protein; Validated
Probab=68.23 E-value=50 Score=33.85 Aligned_cols=83 Identities=13% Similarity=0.151 Sum_probs=61.2
Q ss_pred cceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCC--CcchHHHHHHHHHcCCeEeecCCCCCHHHHHHHHhhcCCeEE
Q 043601 53 ESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPN--SIQFPICLLGVIAIGGIATTANPVYTVSELSKQVKDSSPKLV 130 (488)
Q Consensus 53 ~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n--~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~v 130 (488)
..+|++.+...+..+... .+++++|++....|- ...++..+++.+..|+..+......++..+...+++.++.++
T Consensus 217 v~~s~~~l~~~~~~~~~~---~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~l~~~~~t~~ 293 (559)
T PRK08315 217 ATLTHRNILNNGYFIGEA---MKLTEEDRLCIPVPLYHCFGMVLGNLACVTHGATMVYPGEGFDPLATLAAVEEERCTAL 293 (559)
T ss_pred EEeeHHHHHHHHHHHHHh---cCCCCCceEEEecCcHHHHHHHHHHHHHHhccceEEEecCCCCHHHHHHHHHHcCCeEE
Confidence 468888886655544433 478999998877765 234455678888999888866666778888899999999998
Q ss_pred EEccccHH
Q 043601 131 VTVPELWE 138 (488)
Q Consensus 131 i~~~~~~~ 138 (488)
+..+....
T Consensus 294 ~~~P~~~~ 301 (559)
T PRK08315 294 YGVPTMFI 301 (559)
T ss_pred ecchHHHH
Confidence 87766543
No 147
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=67.07 E-value=55 Score=32.38 Aligned_cols=85 Identities=12% Similarity=0.241 Sum_probs=66.3
Q ss_pred CcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCC----cchHHHHHHHHHcCCeEeecCCCCCHHHHHHHHhhcCC
Q 043601 52 GESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNS----IQFPICLLGVIAIGGIATTANPVYTVSELSKQVKDSSP 127 (488)
Q Consensus 52 ~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~----~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~ 127 (488)
+.++|.-++.+.+..++..+ |+...++++ +||. .-.++..+|++..|+..|.-.|.+++...-+.+++.+|
T Consensus 251 gatLsH~~~~Nna~~vg~r~---g~~e~~~i~--~~~Pl~H~~G~~~~~ma~l~~gat~Vfp~~~f~~k~alqai~~ekc 325 (596)
T KOG1177|consen 251 GATLSHYNFLNNARAVGARA---GYNEKHRIC--IPNPLYHCFGCVLGVMAALMHGATIVFPAPSFDPKDALQAISNEKC 325 (596)
T ss_pred ceeeehhhhhhhHHHHHHHh---CcCcceEEE--ecCchHHHHHHHHHHHHHHHhCcEEEeeCCCCChHHHHHHHHhhce
Confidence 37899999999888777654 665544444 4444 34466788888999999999999999999999999999
Q ss_pred eEEEEccccHHHHh
Q 043601 128 KLVVTVPELWERVK 141 (488)
Q Consensus 128 ~~vi~~~~~~~~~~ 141 (488)
..++..+..+-.+.
T Consensus 326 T~l~gtPtM~~Dll 339 (596)
T KOG1177|consen 326 TTLYGTPTMFVDLL 339 (596)
T ss_pred EEEecChHHHHHHh
Confidence 99998887665554
No 148
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=66.65 E-value=36 Score=32.84 Aligned_cols=65 Identities=12% Similarity=0.173 Sum_probs=49.7
Q ss_pred HHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHHcCCeEeecCCC-----CCHHHHHHHHhhcCCeEEEE
Q 043601 64 VIKVSHGFRHLGVTKHDVVLIFAPNSIQFPICLLGVIAIGGIATTANPV-----YTVSELSKQVKDSSPKLVVT 132 (488)
Q Consensus 64 ~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~vi~ 132 (488)
+..+.-.|+.+++++||-|.+ .+..|+...=++...|+.+|.+|-+ ++++.++..+... .|+|+.
T Consensus 59 T~AL~laL~al~ig~GDeVI~---ps~TfvATan~i~~~Ga~PVFvDid~~T~nid~~~ie~aIt~~-tKAIip 128 (374)
T COG0399 59 TAALHLALLALAIGPGDEVIV---PSFTFVATANAVLLVGAKPVFVDIDPDTLNIDPDLIEAAITPR-TKAIIP 128 (374)
T ss_pred HHHHHHHHHhcCCCCCCEEEe---cCCchHHHHHHHHHcCCeEEEEecCCcccCCCHHHHHHHcccC-CeEEEE
Confidence 345556667778999996655 3678999999999999999998754 4678888888775 666664
No 149
>PRK12583 acyl-CoA synthetase; Provisional
Probab=65.13 E-value=77 Score=32.45 Aligned_cols=83 Identities=18% Similarity=0.289 Sum_probs=60.3
Q ss_pred cceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCC--CcchHHHHHHHHHcCCeEeecCCCCCHHHHHHHHhhcCCeEE
Q 043601 53 ESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPN--SIQFPICLLGVIAIGGIATTANPVYTVSELSKQVKDSSPKLV 130 (488)
Q Consensus 53 ~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n--~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~v 130 (488)
..+|++.+...+..+... .+++++|++....|- ..-.+..+++++..|+.++......+...+...+++.++..+
T Consensus 219 v~~s~~~l~~~~~~~~~~---~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~v~~~~~~~~~~~~~~~i~~~~~t~l 295 (558)
T PRK12583 219 ATLSHHNILNNGYFVAES---LGLTEHDRLCVPVPLYHCFGMVLANLGCMTVGACLVYPNEAFDPLATLQAVEEERCTAL 295 (558)
T ss_pred EEeeHHHHHHHHHHHHHH---hCCCCCCeEEEecCchhhhhHHHHHHHHHhcCceEEeecCCCCHHHHHHHHHHcCCeEE
Confidence 468898886665554444 378899998776653 244566678888889887754556678888899999999998
Q ss_pred EEccccHH
Q 043601 131 VTVPELWE 138 (488)
Q Consensus 131 i~~~~~~~ 138 (488)
+..+..+.
T Consensus 296 ~~~P~~~~ 303 (558)
T PRK12583 296 YGVPTMFI 303 (558)
T ss_pred eccHHHHH
Confidence 87665543
No 150
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=65.12 E-value=80 Score=32.35 Aligned_cols=98 Identities=16% Similarity=0.197 Sum_probs=67.5
Q ss_pred CCCceEEEeCCCC-------cceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCc--chHHHHHHHHHcCCeEeecC
Q 043601 40 YGSKSALIDADSG-------ESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSI--QFPICLLGVIAIGGIATTAN 110 (488)
Q Consensus 40 ~p~~~a~~~~~~~-------~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~--~~~~~~lA~~~~G~~~v~l~ 110 (488)
.|+.+|++-..+| ..+|++.+...+.... ...+++++|++....|-.. -+...++..+..|+..+...
T Consensus 181 ~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~---~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~vv~~~ 257 (539)
T PRK06334 181 DPEDVAVILFTSGTEKLPKGVPLTHANLLANQRACL---KFFSPKEDDVMMSFLPPFHAYGFNSCTLFPLLSGVPVVFAY 257 (539)
T ss_pred CcCCEEEEEECCCCCCCCCEEEEcHHHHHHHHHHHH---HhcCCCCCceEEEecchHhhhhhHHHHHHHHHcCCeEEEec
Confidence 4677776532222 4689988876544433 3457788998888776432 23334567778888877665
Q ss_pred CCCCHHHHHHHHhhcCCeEEEEccccHHHH
Q 043601 111 PVYTVSELSKQVKDSSPKLVVTVPELWERV 140 (488)
Q Consensus 111 ~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 140 (488)
...+.+.+...+++.++.++...+.....+
T Consensus 258 ~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l 287 (539)
T PRK06334 258 NPLYPKKIVEMIDEAKVTFLGSTPVFFDYI 287 (539)
T ss_pred CCCCHHHHHHHHHHhCCcEEEecHHHHHHH
Confidence 557788899999999999999887766554
No 151
>TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family. This model describes a subfamily of the B12 binding domain (pfam02607, pfam02310) proteins. Members of the seed alignment include corrinoid proteins specific to four different, mutally non-homologous enzymes of the genus Methanosarcina. Three of the four cognate enzymes (trimethylamine, dimethylamine, and monomethylamine methyltransferases) all have the unusual, ribosomally incorporated amino acid pyrrolysine at the active site. All act in systems in which a methyl group is transferred to the corrinoid protein to create methylcobalamin, from which the methyl group is later transferred elsewhere.
Probab=65.11 E-value=66 Score=27.85 Aligned_cols=89 Identities=17% Similarity=0.224 Sum_probs=55.4
Q ss_pred EEEEecch--hhHHhHHHHHHHHhhCCceEEEcC-CCCHHHHHHHHHhcCccEEEecHH------HHHHHHhcCCccCCC
Q 043601 236 VTLCVLPM--FHVFGLSFVVYAQLQKGNCVVSMR-KFDLETALRAIEKYRVTHWWVVPP------IILALAKNVSLVKKF 306 (488)
Q Consensus 236 ~~~~~~~~--~~~~~~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~l~~~~~t~l~~~p~------~~~~l~~~~~~~~~~ 306 (488)
.++..++. .|..|........-..|-.++... ...++++.+.+++.+|+++..+-+ .+..+++. ....
T Consensus 86 ~vv~~t~~gd~H~lG~~~v~~~l~~~G~~vi~LG~~vp~e~~v~~~~~~~pd~v~lS~~~~~~~~~~~~~i~~---l~~~ 162 (197)
T TIGR02370 86 KVVCGVAEGDVHDIGKNIVVTMLRANGFDVIDLGRDVPIDTVVEKVKKEKPLMLTGSALMTTTMYGQKDINDK---LKEE 162 (197)
T ss_pred eEEEEeCCCchhHHHHHHHHHHHHhCCcEEEECCCCCCHHHHHHHHHHcCCCEEEEccccccCHHHHHHHHHH---HHHc
Confidence 44444444 677777555555566788888774 467899999999999999876532 22333332 1112
Q ss_pred CC-CCccEEEEccCCCcHHHHHH
Q 043601 307 DL-SSLKGIGSGAAPLRKELVEE 328 (488)
Q Consensus 307 ~l-~~lr~v~~~G~~l~~~~~~~ 328 (488)
.+ ++++ ++.||.+++++..+.
T Consensus 163 ~~~~~v~-i~vGG~~~~~~~~~~ 184 (197)
T TIGR02370 163 GYRDSVK-FMVGGAPVTQDWADK 184 (197)
T ss_pred CCCCCCE-EEEEChhcCHHHHHH
Confidence 12 2333 788998888765443
No 152
>PLN03051 acyl-activating enzyme; Provisional
Probab=63.22 E-value=66 Score=32.54 Aligned_cols=85 Identities=15% Similarity=0.047 Sum_probs=59.6
Q ss_pred cceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcc-hHHHHHHHHHcCCeEeecCCCCCHHHHHHHHhhcCCeEEE
Q 043601 53 ESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQ-FPICLLGVIAIGGIATTANPVYTVSELSKQVKDSSPKLVV 131 (488)
Q Consensus 53 ~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi 131 (488)
..+|++.+...+... ....+++++|++....|-+.. .+..+++++..|+..+..+...+...+...+++.++.++.
T Consensus 137 V~~sh~~~~~~~~~~---~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~t~v~~~~~~~~~~~~~~i~~~~vt~~~ 213 (499)
T PLN03051 137 IPWTHLSPLRCASDG---WAHMDIQPGDVVCWPTNLGWMMGPWLLYSAFLNGATLALYGGAPLGRGFGKFVQDAGVTVLG 213 (499)
T ss_pred EEEccchHHHHHHHH---HHhcCCCCCCEEEEccCcceeeehHHHHHHHHcCCEEEecCCCCCcHHHHHHHHHhCCcEEE
Confidence 467887765543322 234578889988766664432 2345678889999988776555677889999999999999
Q ss_pred EccccHHHH
Q 043601 132 TVPELWERV 140 (488)
Q Consensus 132 ~~~~~~~~~ 140 (488)
..+.....+
T Consensus 214 ~vP~~~~~l 222 (499)
T PLN03051 214 LVPSIVKAW 222 (499)
T ss_pred eCHHHHHHH
Confidence 877766554
No 153
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=62.06 E-value=99 Score=29.96 Aligned_cols=98 Identities=16% Similarity=0.192 Sum_probs=70.1
Q ss_pred CCceEEEeCCCC-------cceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcc-hHHHHHHHHHcCCeEeecCCC
Q 043601 41 GSKSALIDADSG-------ESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQ-FPICLLGVIAIGGIATTANPV 112 (488)
Q Consensus 41 p~~~a~~~~~~~-------~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~-~~~~~lA~~~~G~~~v~l~~~ 112 (488)
++.++++...+| ..+|++.+...+..+.. ..++++++++....|.... .+..++..+..|+..+..+..
T Consensus 119 ~~~~~~i~~TSGTtG~pK~v~~s~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~g~~~~~~~~~ 195 (408)
T TIGR01733 119 PDDLAYVIYTSGSTGRPKGVVVTHRSLVNLLAWLAR---RYGLDPDDRVLQFASLSFDASVEEIFGTLLAGATLVVPPED 195 (408)
T ss_pred CCCcEEEEEcCCCCCCCCEEEeccHHHHHHHHHHHH---hcCCCCCceEEEecCCccchhHHHHHHHHhCCCEEEEcChh
Confidence 566666532212 46788888776666554 4467789988887776644 455677888889888877665
Q ss_pred CC--HHHHHHHHhhcCCeEEEEccccHHHHh
Q 043601 113 YT--VSELSKQVKDSSPKLVVTVPELWERVK 141 (488)
Q Consensus 113 ~~--~~~l~~~l~~~~~~~vi~~~~~~~~~~ 141 (488)
.. ...+..+++..++..++..+.....+.
T Consensus 196 ~~~~~~~~~~~~~~~~~t~l~~~p~~~~~l~ 226 (408)
T TIGR01733 196 EERDAALLAALIAEHPVTVLNLTPSLLALLA 226 (408)
T ss_pred hccCHHHHHHHHHHcCceEEEeCHHHHHHHH
Confidence 55 688899999999999998887766554
No 154
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=60.55 E-value=26 Score=33.84 Aligned_cols=89 Identities=19% Similarity=0.278 Sum_probs=56.1
Q ss_pred HHHHHhhc-cccCCCceEEEeCCCCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHHcCCeEe
Q 043601 29 MVHFLFRN-SASYGSKSALIDADSGESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQFPICLLGVIAIGGIAT 107 (488)
Q Consensus 29 l~~~l~~~-a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v 107 (488)
..+.|++. ++....+-++.... | ...+-..|...|+++||.|++- ...+....-|+..+|+.+|
T Consensus 26 ~~~~fE~~~a~~~g~~~~~~~~s-g-----------t~Al~~al~~l~~~~gdeVi~p---~~t~~~~~~ai~~~G~~pv 90 (363)
T PF01041_consen 26 YVEEFEKEFAEYFGVKYAVAVSS-G-----------TSALHLALRALGLGPGDEVIVP---AYTFPATASAILWAGAEPV 90 (363)
T ss_dssp HHHHHHHHHHHHHTSSEEEEESS-H-----------HHHHHHHHHHTTGGTTSEEEEE---SSS-THHHHHHHHTT-EEE
T ss_pred HHHHHHHHHHHHhCCCeEEEeCC-h-----------hHHHHHHHHhcCCCcCceEecC---CCcchHHHHHHHHhccEEE
Confidence 34444443 44555566665541 1 2345556677899999998885 4566888899999999999
Q ss_pred ecCCC-----CCHHHHHHHHhhcCCeEEEEc
Q 043601 108 TANPV-----YTVSELSKQVKDSSPKLVVTV 133 (488)
Q Consensus 108 ~l~~~-----~~~~~l~~~l~~~~~~~vi~~ 133 (488)
.+|-+ ++++.+...+..-. ++|+..
T Consensus 91 ~~Di~~~~~~id~~~~~~~i~~~t-~ai~~~ 120 (363)
T PF01041_consen 91 FVDIDPETLNIDPEALEKAITPKT-KAILVV 120 (363)
T ss_dssp EE-BETTTSSB-HHHHHHHHHTTE-EEEEEE
T ss_pred EEeccCCcCCcCHHHHHHHhccCc-cEEEEe
Confidence 88754 35777887765443 666654
No 155
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=60.23 E-value=1e+02 Score=31.07 Aligned_cols=85 Identities=15% Similarity=0.160 Sum_probs=64.4
Q ss_pred cceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcc-hHHHHHHHHHcCCeEeecCCCCCHHHHHHHHhhcCCeEEE
Q 043601 53 ESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQ-FPICLLGVIAIGGIATTANPVYTVSELSKQVKDSSPKLVV 131 (488)
Q Consensus 53 ~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi 131 (488)
..+|++.+...+..+...+ +++++|++...+|-... .+..+++++..|+..+..+ ..+.+.+...+++.++.++.
T Consensus 179 v~~t~~~l~~~~~~~~~~~---~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~ 254 (515)
T TIGR03098 179 VVLSHRNLVAGAQSVATYL---ENRPDDRLLAVLPLSFDYGFNQLTTAFYVGATVVLHD-YLLPRDVLKALEKHGITGLA 254 (515)
T ss_pred EEEecHHHHHHHHHHHHHh---CCCcccEEEEECchhhHhHHHHHHHHHHcCCEEEEcC-CCCHHHHHHHHHHcCCceEe
Confidence 5689998877666655443 67889999888876543 3456778889999888664 56788899999999999999
Q ss_pred EccccHHHHh
Q 043601 132 TVPELWERVK 141 (488)
Q Consensus 132 ~~~~~~~~~~ 141 (488)
..+.....+.
T Consensus 255 ~~P~~~~~l~ 264 (515)
T TIGR03098 255 AVPPLWAQLA 264 (515)
T ss_pred cChHHHHHHH
Confidence 8877765553
No 156
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=60.13 E-value=82 Score=32.47 Aligned_cols=86 Identities=10% Similarity=0.019 Sum_probs=61.9
Q ss_pred cceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcc--hHHHHHHHHHcCCeEeecCCCCCHHHHHHHHhhcCCeEE
Q 043601 53 ESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQ--FPICLLGVIAIGGIATTANPVYTVSELSKQVKDSSPKLV 130 (488)
Q Consensus 53 ~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~--~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~v 130 (488)
-.+|++.+...+.. .....+++++|++....+-... ....+++.+..|+..+......+...+...+++.++.++
T Consensus 223 V~~s~~~l~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~i~~~~~t~~ 299 (570)
T PRK04319 223 VLHVHNAMLQHYQT---GKYVLDLHEDDVYWCTADPGWVTGTSYGIFAPWLNGATNVIDGGRFSPERWYRILEDYKVTVW 299 (570)
T ss_pred EEEecHHHHHHHHH---HHHhcCCCCCceEEecCChHHhhCchHHHHHHHhcCceEEEECCCCCHHHHHHHHHHcCCeEE
Confidence 46788887654433 2334578888987665544322 244577888999988877777889999999999999999
Q ss_pred EEccccHHHHh
Q 043601 131 VTVPELWERVK 141 (488)
Q Consensus 131 i~~~~~~~~~~ 141 (488)
+..+.....+.
T Consensus 300 ~~~P~~~~~l~ 310 (570)
T PRK04319 300 YTAPTAIRMLM 310 (570)
T ss_pred EeCHHHHHHHH
Confidence 98877766554
No 157
>PLN02565 cysteine synthase
Probab=60.06 E-value=78 Score=29.93 Aligned_cols=91 Identities=15% Similarity=-0.026 Sum_probs=62.1
Q ss_pred ceEEEeCCCCcceeHHHHHHHHHHHHHHHHHcCC-CCCCEEEEEcCCCcchHHHHHHHHHcCCeEeecCCCCCHHHHHHH
Q 043601 43 KSALIDADSGESLTFSQFKSIVIKVSHGFRHLGV-TKHDVVLIFAPNSIQFPICLLGVIAIGGIATTANPVYTVSELSKQ 121 (488)
Q Consensus 43 ~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~-~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~ 121 (488)
++.+-....+-+-||++= -+..+-..+.+.|. .+|....+....+-.-....+++..+|..++.+-|...+......
T Consensus 31 ~i~~K~E~~nPtGSfKdR--~A~~~l~~~~~~g~~~~g~~~vv~aSsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~ 108 (322)
T PLN02565 31 RIAAKLEMMEPCSSVKDR--IGYSMITDAEEKGLIKPGESVLIEPTSGNTGIGLAFMAAAKGYKLIITMPASMSLERRII 108 (322)
T ss_pred eEEEEecccCCccchHHH--HHHHHHHHHHHcCCCCCCCcEEEEECCChHHHHHHHHHHHcCCeEEEEeCCCCcHHHHHH
Confidence 566654433345556542 33333344444554 778665566666777777788888999988777777777788899
Q ss_pred HhhcCCeEEEEccc
Q 043601 122 VKDSSPKLVVTVPE 135 (488)
Q Consensus 122 l~~~~~~~vi~~~~ 135 (488)
++..++++++++..
T Consensus 109 i~~~GA~V~~~~~~ 122 (322)
T PLN02565 109 LLAFGAELVLTDPA 122 (322)
T ss_pred HHHcCCEEEEeCCC
Confidence 99999999998753
No 158
>cd01445 TST_Repeats Thiosulfate sulfurtransferases (TST) contain 2 copies of the Rhodanese Homology Domain. Only the second repeat contains the catalytically active Cys residue. The role of the 1st repeat is uncertain, but believed to be involved in protein interaction. This CD aligns the 1st and 2nd repeats.
Probab=58.74 E-value=26 Score=28.27 Aligned_cols=43 Identities=9% Similarity=0.033 Sum_probs=34.6
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCC---CcchHHHHHHHHHcCCeEe
Q 043601 65 IKVSHGFRHLGVTKHDVVLIFAPN---SIQFPICLLGVIAIGGIAT 107 (488)
Q Consensus 65 ~~la~~L~~~g~~~g~~V~i~~~n---~~~~~~~~lA~~~~G~~~v 107 (488)
..++..|.+.|+.+++.|.+++.. +.....+++++-.+|..-|
T Consensus 81 ~~~~~~~~~~GI~~~~~vVvY~~~~~~g~~A~r~~~~l~~~G~~~v 126 (138)
T cd01445 81 AEFAAMFEAKGIDLDKHLIATDGDDLGGFTACHIALAARLCGHPDV 126 (138)
T ss_pred HHHHHHHHHcCCCCCCeEEEECCCCCcchHHHHHHHHHHHcCCCCe
Confidence 467888999999999999999975 5666777788888886533
No 159
>PF00403 HMA: Heavy-metal-associated domain; InterPro: IPR006121 Proteins that transport heavy metals in micro-organisms and mammals share similarities in their sequences and structures. These proteins provide an important focus for research, some being involved in bacterial resistance to toxic metals, such as lead and cadmium, while others are involved in inherited human syndromes, such as Wilson's and Menke's diseases []. A conserved domain has been found in a number of these heavy metal transport or detoxification proteins []. The domain, which has been termed Heavy-Metal-Associated (HMA), contains two conserved cysteines that are probably involved in metal binding. Structure solution of the fourth HMA domain of the Menke's copper transporting ATPase shows a well-defined structure comprising a four-stranded antiparallel beta-sheet and two alpha helices packed in an alpha-beta sandwich fold []. This fold is common to other domains and is classified as "ferredoxin-like".; GO: 0046872 metal ion binding, 0030001 metal ion transport; PDB: 2VOY_A 1P6T_A 1KQK_A 2RML_A 1JWW_A 3K7R_F 1FES_A 1CC8_A 1FD8_A 2GGP_A ....
Probab=58.07 E-value=51 Score=21.89 Aligned_cols=44 Identities=16% Similarity=0.178 Sum_probs=32.2
Q ss_pred eHhHHHhcCCCeeeeEEEeecCCCCCceEEEEEEeCCCCCCCHHHHHHHHHh
Q 043601 433 ELEGVLVSHPEILDAVVIPFPDPEAGEVPIAYVVRSPNSSLTKEDVQKFVAN 484 (488)
Q Consensus 433 ~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~~~~~ 484 (488)
.|+..|.++|+|..+.+-...+ .+.|...+.. .+.++|.+.+++
T Consensus 15 ~v~~~l~~~~GV~~v~vd~~~~-------~v~v~~~~~~-~~~~~i~~~i~~ 58 (62)
T PF00403_consen 15 KVEKALSKLPGVKSVKVDLETK-------TVTVTYDPDK-TSIEKIIEAIEK 58 (62)
T ss_dssp HHHHHHHTSTTEEEEEEETTTT-------EEEEEESTTT-SCHHHHHHHHHH
T ss_pred HHHHHHhcCCCCcEEEEECCCC-------EEEEEEecCC-CCHHHHHHHHHH
Confidence 7899999999999888854332 3555555554 677889888765
No 160
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=56.90 E-value=58 Score=31.76 Aligned_cols=98 Identities=22% Similarity=0.307 Sum_probs=69.6
Q ss_pred CCCceEEEeCCCC-------cceeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCCcchH--HHHHHHHHcCCeEeec
Q 043601 40 YGSKSALIDADSG-------ESLTFSQFKSIVIKVSHGFRH-LGVTKHDVVLIFAPNSIQFP--ICLLGVIAIGGIATTA 109 (488)
Q Consensus 40 ~p~~~a~~~~~~~-------~~~Ty~el~~~~~~la~~L~~-~g~~~g~~V~i~~~n~~~~~--~~~lA~~~~G~~~v~l 109 (488)
.|++++++...+| ..+|++.+...+..+. +.. .+++ |++...+|-+..+- ..+++++..|+..+..
T Consensus 153 ~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~--~~~~~~~~--d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~ 228 (417)
T PF00501_consen 153 SPDDPAFILFTSGTTGKPKGVVLTHRNLLAQARALA--LPEYFGLG--DRILSFLPLSHIFGLISALLAALFSGATLVLP 228 (417)
T ss_dssp TTTSEEEEEEESSSSSSEEEEEEEHHHHHHHHHHHH--HHHTTTTT--TEEEESS-TTSHHHHHHHHHHHHHCTSEEEEE
T ss_pred CccceeEeeccccccccccccccccccccccccccc--cccccccC--ceEEeecccccccccccccccccccccccccc
Confidence 5688887642222 5689999999888877 433 2333 67766666654333 6789999999999988
Q ss_pred CCCCC--HHHHHHHHhhcCCeEEEEccccHHHHh
Q 043601 110 NPVYT--VSELSKQVKDSSPKLVVTVPELWERVK 141 (488)
Q Consensus 110 ~~~~~--~~~l~~~l~~~~~~~vi~~~~~~~~~~ 141 (488)
++... .+.+...+++.++..+++.+.....+.
T Consensus 229 ~~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~ 262 (417)
T PF00501_consen 229 SPFDLFDPESLLELISRYKPTILFAVPSMLEALL 262 (417)
T ss_dssp SSHHHHHHHHHHHHHHHHTESEEEEEHHHHHHHH
T ss_pred ccccccccccchhccccccccccccccccccccc
Confidence 76544 566788999999999999887776553
No 161
>PF01037 AsnC_trans_reg: AsnC family; InterPro: IPR019887 The many bacterial transcription regulation proteins which bind DNA through a 'helix-turn-helix' motif can be classified into subfamilies on the basis of sequence similarities. One such family is the AsnC/Lrp subfamily []. The Lrp family of transcriptional regulators appears to be widely distributed among bacteria and archaea, as an important regulatory system of the amino acid metabolism and related processes []. Members of the Lrp family are small DNA-binding proteins with molecular masses of around 15 kDa. Target promoters often contain a number of binding sites that typically lack obvious inverted repeat elements, and to which binding is usually co-operative. LrpA from Pyrococcus furiosus is the first Lrp-like protein to date of which a three-dimensional structure has been solved. In the crystal structure LrpA forms an octamer consisting of four dimers. The structure revealed that the N-terminal part of the protein consists of a helix-turn-helix (HTH) domain, a fold generally involved in DNA binding. The C terminus of Lrp-like proteins has a beta-fold, where the two alpha-helices are located at one side of the four-stranded antiparallel beta-sheet. LrpA forms a homodimer mainly through interactions between the beta-strands of this C-terminal domain, and an octamer through further interactions between the second alpha-helix and fourth beta-strand of the motif. Hence, the C-terminal domain of Lrp-like proteins appears to be involved in ligand-response and activation [].; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0043565 sequence-specific DNA binding, 0006355 regulation of transcription, DNA-dependent, 0005622 intracellular; PDB: 2DJW_F 2GQQ_A 2ZNY_E 2ZNZ_G 1RI7_A 2CYY_A 2E1C_A 2CG4_B 2DBB_B 1I1G_A ....
Probab=56.47 E-value=34 Score=23.66 Aligned_cols=44 Identities=18% Similarity=0.255 Sum_probs=32.8
Q ss_pred eHhHHHhcCCCeeeeEEEeecCCCCCceEEEEEEeCCCCCCCHHHHHHHHHhhc
Q 043601 433 ELEGVLVSHPEILDAVVIPFPDPEAGEVPIAYVVRSPNSSLTKEDVQKFVANDS 486 (488)
Q Consensus 433 ~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~~~~~~l 486 (488)
++...+.++|+|.++..+.-. ..+.+.+..+ +.+++.+++.+++
T Consensus 14 ~~~~~l~~~p~V~~~~~vtG~-----~d~~~~v~~~-----d~~~l~~~i~~~l 57 (74)
T PF01037_consen 14 EFAEALAEIPEVVECYSVTGE-----YDLILKVRAR-----DMEELEEFIREKL 57 (74)
T ss_dssp HHHHHHHTSTTEEEEEEESSS-----SSEEEEEEES-----SHHHHHHHHHHTH
T ss_pred HHHHHHHcCCCEEEEEEEeCC-----CCEEEEEEEC-----CHHHHHHHHHHHh
Confidence 788889999999999988432 2456666654 6788888877654
No 162
>PLN02736 long-chain acyl-CoA synthetase
Probab=55.32 E-value=2.2e+02 Score=29.99 Aligned_cols=101 Identities=11% Similarity=-0.044 Sum_probs=68.6
Q ss_pred hhccHHHHHHhhHH-hhhhhhcCCCCcEEEEecchhhHHhHHHHHHHHhhCCceEEEcC-CCCHHHHHHHHHhcCccEEE
Q 043601 210 ILTHKNFIASSLMT-AMDQELAGALDYVTLCVLPMFHVFGLSFVVYAQLQKGNCVVSMR-KFDLETALRAIEKYRVTHWW 287 (488)
Q Consensus 210 ~~t~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~l~~~~~t~l~ 287 (488)
.+|.+.+...+... ......+..+++++...++-..-+ ...+++++..|+..+.+. ..+++++...+++.++..++
T Consensus 78 ~lTy~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~--~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~l~ 155 (651)
T PLN02736 78 WMTYGEAGTARTAIGSGLVQHGIPKGACVGLYFINRPEW--LIVDHACSAYSYVSVPLYDTLGPDAVKFIVNHAEVAAIF 155 (651)
T ss_pred EEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHH--HHHHHHHHHcCCeEEEeecCCCHHHHHHHHhccCCCEEE
Confidence 46888777653221 122234577888887776654432 255678888999999774 47889999999999999999
Q ss_pred ecHHHHHHHHhcCCccCCCCCCCccEEEEc
Q 043601 288 VVPPIILALAKNVSLVKKFDLSSLKGIGSG 317 (488)
Q Consensus 288 ~~p~~~~~l~~~~~~~~~~~l~~lr~v~~~ 317 (488)
+.+..+..+..... .++.++.++..
T Consensus 156 ~~~~~~~~~~~~~~-----~~~~l~~ii~~ 180 (651)
T PLN02736 156 CVPQTLNTLLSCLS-----EIPSVRLIVVV 180 (651)
T ss_pred ECHHHHHHHHHHhh-----cCCCceEEEEE
Confidence 99888776654311 23456655543
No 163
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=54.89 E-value=78 Score=31.11 Aligned_cols=83 Identities=16% Similarity=0.155 Sum_probs=60.4
Q ss_pred cceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcc-hHHHHHHHHHcCCeEeecCCCCCHHHHHHHHhhcCCeEEE
Q 043601 53 ESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQ-FPICLLGVIAIGGIATTANPVYTVSELSKQVKDSSPKLVV 131 (488)
Q Consensus 53 ~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi 131 (488)
..+|++.+...+..+...+ +++++|++....|-..- .+..+++++..|+..+..++. ..+...+++.++..+.
T Consensus 129 v~~s~~~~~~~~~~~~~~~---~~~~~d~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~---~~~~~~l~~~~~t~~~ 202 (436)
T TIGR01923 129 VPHTFRNHYASAVGSKENL---GFTEDDNWLLSLPLYHISGLSILFRWLIEGATLRIVDKF---NQLLEMIANERVTHIS 202 (436)
T ss_pred EEEehHHHHHHHHHHHhhc---CCCCCceEEEccCcHhHHHHHHHHHHHhcCceEEecchH---HHHHHHHHHhCCeEEE
Confidence 4789999888776666544 78899998887765322 233467888899988877543 3778889999999998
Q ss_pred EccccHHHHh
Q 043601 132 TVPELWERVK 141 (488)
Q Consensus 132 ~~~~~~~~~~ 141 (488)
..+.....+.
T Consensus 203 ~~P~~l~~l~ 212 (436)
T TIGR01923 203 LVPTQLNRLL 212 (436)
T ss_pred eHHHHHHHHH
Confidence 8776655443
No 164
>PF09580 Spore_YhcN_YlaJ: Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ); InterPro: IPR019076 This entry contains YhcN and YlaJ, which are predicted lipoproteins that have been detected as spore proteins but not vegetative proteins in Bacillus subtilis. Both appear to be expressed under control of the RNA polymerase sigma-G factor. The YlaJ-like members of this family have a low-complexity, strongly acidic, 40-residue C-terminal domain.
Probab=54.72 E-value=35 Score=28.88 Aligned_cols=48 Identities=19% Similarity=0.183 Sum_probs=32.6
Q ss_pred eHhHHHhcCCCeeeeEEEeecCCCCCceEEEEEEeCCCCCCCHHHHHHHHHhhc
Q 043601 433 ELEGVLVSHPEILDAVVIPFPDPEAGEVPIAYVVRSPNSSLTKEDVQKFVANDS 486 (488)
Q Consensus 433 ~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~~~~~~l 486 (488)
.|+..+.+.++|.++.|+...+ .+++-|.++.. ....+++++.+++.+
T Consensus 79 ~i~~~v~~~~~V~~A~vvv~~~-----~a~Vav~~~~~-~~~~~~i~~~V~~~v 126 (177)
T PF09580_consen 79 RIANRVKKVPGVEDATVVVTDD-----NAYVAVDLDFN-RFNTKKIKKKVEKAV 126 (177)
T ss_pred HHHHHHhcCCCceEEEEEEECC-----EEEEEEEeccc-ccchhHHHHHHHHHH
Confidence 8899999999999999997755 34444444422 445566666655543
No 165
>COG4009 Uncharacterized protein conserved in archaea [Function unknown]
Probab=53.99 E-value=71 Score=22.63 Aligned_cols=66 Identities=11% Similarity=0.170 Sum_probs=51.7
Q ss_pred cceeHHHHHHHHHHHH---HHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHHcCCeEeecCCCCCHHHHHHHHhhcCCeE
Q 043601 53 ESLTFSQFKSIVIKVS---HGFRHLGVTKHDVVLIFAPNSIQFPICLLGVIAIGGIATTANPVYTVSELSKQVKDSSPKL 129 (488)
Q Consensus 53 ~~~Ty~el~~~~~~la---~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ 129 (488)
...||+||.+.-+.++ +.|....++..|-++|+-=++... .-++.++...+.+++...+++.+++.
T Consensus 8 gi~t~keL~eE~~~Fv~~kA~l~k~~L~dDde~aIfnI~gT~S-----------y~V~Fl~~~~s~eev~~ele~mga~i 76 (88)
T COG4009 8 GIATYKELDEELKDFVRLKAHLAKVDLNDDDELAIFNIEGTSS-----------YYVVFLEEVESEEEVERELEDMGAEI 76 (88)
T ss_pred hheeHHhhhHHHHHHHHHHHHhcccccCCCCcEEEEEecCcee-----------EEEEEEeccCCHHHHHHHHHHhCchh
Confidence 3679999998876555 456667889999999988776433 45677888889999999999988764
No 166
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=53.83 E-value=1.5e+02 Score=27.37 Aligned_cols=76 Identities=7% Similarity=-0.022 Sum_probs=51.3
Q ss_pred CcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHHcCCeEeecCCCC----CHHHHHHHHhhcCC
Q 043601 52 GESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQFPICLLGVIAIGGIATTANPVY----TVSELSKQVKDSSP 127 (488)
Q Consensus 52 ~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~----~~~~l~~~l~~~~~ 127 (488)
+..+=++-+. |.-.||..|++. |..|.+++.+....+.. .+...|..+..++-.. ...++...++..++
T Consensus 9 ~~~iG~GHv~-Rcl~LA~~l~~~----g~~v~f~~~~~~~~~~~--~i~~~g~~v~~~~~~~~~~~d~~~~~~~l~~~~~ 81 (279)
T TIGR03590 9 SSEIGLGHVM-RCLTLARALHAQ----GAEVAFACKPLPGDLID--LLLSAGFPVYELPDESSRYDDALELINLLEEEKF 81 (279)
T ss_pred CccccccHHH-HHHHHHHHHHHC----CCEEEEEeCCCCHHHHH--HHHHcCCeEEEecCCCchhhhHHHHHHHHHhcCC
Confidence 3444455443 577888999775 44677777766555443 3357788777665432 34568888999999
Q ss_pred eEEEEcc
Q 043601 128 KLVVTVP 134 (488)
Q Consensus 128 ~~vi~~~ 134 (488)
+++|+|.
T Consensus 82 d~vV~D~ 88 (279)
T TIGR03590 82 DILIVDH 88 (279)
T ss_pred CEEEEcC
Confidence 9999996
No 167
>PRK06164 acyl-CoA synthetase; Validated
Probab=53.37 E-value=1.2e+02 Score=30.79 Aligned_cols=97 Identities=18% Similarity=0.178 Sum_probs=68.0
Q ss_pred CCceEEEeCCCC-------cceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCc-chHHHHHHHHHcCCeEeecCCC
Q 043601 41 GSKSALIDADSG-------ESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSI-QFPICLLGVIAIGGIATTANPV 112 (488)
Q Consensus 41 p~~~a~~~~~~~-------~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~-~~~~~~lA~~~~G~~~v~l~~~ 112 (488)
++.++++...+| ..+|.+.+...+..++..+ ++.+++++...+|-+. -.+..+++++..|+..+.. +.
T Consensus 180 ~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~---~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~-~~ 255 (540)
T PRK06164 180 PDAGALLFTTSGTTSGPKLVLHRQATLLRHARAIARAY---GYDPGAVLLAALPFCGVFGFSTLLGALAGGAPLVCE-PV 255 (540)
T ss_pred CCceEEEEECCCCCCCCcEEEEehHHHHHHHHHHHHhc---CCCCCCEEEEcCCchhHHHHHHHHHHHhcCceEEec-CC
Confidence 456666542222 4688888876666555544 6789999888877642 2234577888888887765 46
Q ss_pred CCHHHHHHHHhhcCCeEEEEccccHHHHh
Q 043601 113 YTVSELSKQVKDSSPKLVVTVPELWERVK 141 (488)
Q Consensus 113 ~~~~~l~~~l~~~~~~~vi~~~~~~~~~~ 141 (488)
.....+...+++.++.+++..+.....+.
T Consensus 256 ~~~~~~~~~l~~~~~t~~~~~p~~l~~l~ 284 (540)
T PRK06164 256 FDAARTARALRRHRVTHTFGNDEMLRRIL 284 (540)
T ss_pred CCHHHHHHHHHHhCCeeecCCHHHHHHHH
Confidence 77888899999999999988776665543
No 168
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=53.12 E-value=1.2e+02 Score=30.17 Aligned_cols=85 Identities=14% Similarity=0.143 Sum_probs=61.0
Q ss_pred cceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcc-hHHHHHHHHHcCCeEeecCCCCCHHHHHHHHhhcCCeEEE
Q 043601 53 ESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQ-FPICLLGVIAIGGIATTANPVYTVSELSKQVKDSSPKLVV 131 (488)
Q Consensus 53 ~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi 131 (488)
..+|++.+...+... ....+++++|++....|-... .+..+++.+..|+..+..+ ..+...+...++..++.++.
T Consensus 159 v~~s~~~~~~~~~~~---~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~ 234 (483)
T PRK03640 159 VIQTYGNHWWSAVGS---ALNLGLTEDDCWLAAVPIFHISGLSILMRSVIYGMRVVLVE-KFDAEKINKLLQTGGVTIIS 234 (483)
T ss_pred EEEecHHHHHHHHHH---HHhcCCCcCcEEEEecCHHHHHHHHHHHHHHhcCCEEEecC-CCCHHHHHHHHHHhCCcEEE
Confidence 468888876544332 233588999999888874322 2334577778898887665 57788999999999999999
Q ss_pred EccccHHHHh
Q 043601 132 TVPELWERVK 141 (488)
Q Consensus 132 ~~~~~~~~~~ 141 (488)
..+.....+.
T Consensus 235 ~~P~~~~~l~ 244 (483)
T PRK03640 235 VVSTMLQRLL 244 (483)
T ss_pred eHHHHHHHHH
Confidence 8887766553
No 169
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=51.70 E-value=78 Score=30.72 Aligned_cols=59 Identities=14% Similarity=0.115 Sum_probs=38.4
Q ss_pred HHHcCCCCCCEEEEEcCCCcchHHHHHHHHHcCCeEeecCCC-----CCHHHHHHHHhhcCCeEEEEc
Q 043601 71 FRHLGVTKHDVVLIFAPNSIQFPICLLGVIAIGGIATTANPV-----YTVSELSKQVKDSSPKLVVTV 133 (488)
Q Consensus 71 L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~vi~~ 133 (488)
+...++++||.|.+-. +.+.....++...|+.+++++.+ .+.+.+...+.. +.++|+..
T Consensus 63 l~al~~~pGd~Viv~~---~t~~~~~~~~~~~G~~~v~vd~d~~~~~~d~~~le~~i~~-~tk~Iip~ 126 (376)
T TIGR02379 63 ALLLDIQPGDEVIMPS---YTFVSTANAFVLRGAKIVFVDIRPDTMNIDETLIESAITH-RTKAIVPV 126 (376)
T ss_pred HHHcCCCCcCEEEECC---CCcHHHHHHHHHcCCEEEEEecCCCcCCCCHHHHHHhcCc-CceEEEEe
Confidence 3445788999888743 34556666777889877776643 355667766643 56666643
No 170
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=51.59 E-value=1.7e+02 Score=30.19 Aligned_cols=98 Identities=17% Similarity=0.208 Sum_probs=66.8
Q ss_pred CCCceEEEeC---CCC----cceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcc-hHHHHHHHHHcCCeEeecCC
Q 043601 40 YGSKSALIDA---DSG----ESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQ-FPICLLGVIAIGGIATTANP 111 (488)
Q Consensus 40 ~p~~~a~~~~---~~~----~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~-~~~~~lA~~~~G~~~v~l~~ 111 (488)
.++.++++-. ..| ..+|++.+...+.... ...++.++|++....|-... .+...++.+..|+..+.. +
T Consensus 170 ~~~~~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~---~~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~~v~~-~ 245 (563)
T PLN02860 170 APDDAVLICFTSGTTGRPKGVTISHSALIVQSLAKI---AIVGYGEDDVYLHTAPLCHIGGLSSALAMLMVGACHVLL-P 245 (563)
T ss_pred CCCCeEEEEecCCCCCCCceEEeehHHHHHHHHHHH---hhcCCCCCCEEEEecCchhhccHHHHHHHHHcCceEEec-C
Confidence 4566776422 222 4678888765444332 33578899988877774432 234567778888887765 5
Q ss_pred CCCHHHHHHHHhhcCCeEEEEccccHHHHh
Q 043601 112 VYTVSELSKQVKDSSPKLVVTVPELWERVK 141 (488)
Q Consensus 112 ~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~ 141 (488)
.++...+...+++.++.++...+.....+.
T Consensus 246 ~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~ 275 (563)
T PLN02860 246 KFDAKAALQAIKQHNVTSMITVPAMMADLI 275 (563)
T ss_pred CCCHHHHHHHHHHhCCeeEEeChHHHHHHH
Confidence 678888999999999999998877665553
No 171
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=50.75 E-value=2.1e+02 Score=30.85 Aligned_cols=119 Identities=13% Similarity=0.076 Sum_probs=75.5
Q ss_pred CCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHh--hhhh--hcCCCC-----------cEEEEecchhhHHhHHHHH
Q 043601 189 KQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTA--MDQE--LAGALD-----------YVTLCVLPMFHVFGLSFVV 253 (488)
Q Consensus 189 ~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~--~~~~--~~~~~~-----------~~~~~~~~~~~~~~~~~~~ 253 (488)
.++.++++....|. + ...+|.+.+...+.... +... .+..++ +++....+-.. .+....
T Consensus 74 ~p~~~Al~~~~~g~---~-~~~~Ty~el~~~v~~~A~~L~~~~~~Gv~~g~~~~~~~~g~~d~V~i~~~N~~--ew~~~~ 147 (746)
T PTZ00342 74 NNNKIAIVEHSCGE---P-QNYITYGNFFKKVLSFSHSLNTYEGKGIPEKKYNEEQNNGKFKLLGLYGSNSI--NWLVAD 147 (746)
T ss_pred cCCceeEeccCCCC---C-ceeeeHHHHHHHHHHHHHHHHHHhhcCCCcCccccccccccccEEEEEcCCCH--HHHHHH
Confidence 35666765432221 1 13577877776533222 2211 245555 66666665432 223567
Q ss_pred HHHhhCCceEEEcC-CCCHHHHHHHHHhcCccEEEecHHHHHHHHhcCCccCCCCCCCccEEEEcc
Q 043601 254 YAQLQKGNCVVSMR-KFDLETALRAIEKYRVTHWWVVPPIILALAKNVSLVKKFDLSSLKGIGSGA 318 (488)
Q Consensus 254 ~~~l~~G~~~~~~~-~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~v~~~G 318 (488)
++++..|+..+.+. .+.++.+...+++.++..+++.+..+..+... . ..++.++.++.-+
T Consensus 148 lA~~~~Gav~Vpl~~~~~~~el~~il~~s~~~~lv~~~~~~~~l~~~-~----~~~~~l~~ii~~~ 208 (746)
T PTZ00342 148 LACMLSGVTTLVMHSKFSIDVIVDILNETKLEWLCLDLDLVEGLLER-K----NELPHLKKLIILD 208 (746)
T ss_pred HHHHHcCCeEEEecCCCCHHHHHHHHhcCCCCEEEEcHHHHHHHHHh-h----ccCCCceEEEEEC
Confidence 88899999999884 57899999999999999999988888777653 1 2355677666543
No 172
>PRK06188 acyl-CoA synthetase; Validated
Probab=50.72 E-value=1.7e+02 Score=29.61 Aligned_cols=84 Identities=12% Similarity=0.110 Sum_probs=63.0
Q ss_pred cceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHHcCCeEeecCCCCCHHHHHHHHhhcCCeEEEE
Q 043601 53 ESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQFPICLLGVIAIGGIATTANPVYTVSELSKQVKDSSPKLVVT 132 (488)
Q Consensus 53 ~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~ 132 (488)
..+|++.+...+.. .....+++.++++....|-...+...+++.+..|+..+..+ ..++..+...++..++.+++.
T Consensus 186 v~~s~~~l~~~~~~---~~~~~~~~~~~~~l~~~pl~~~~g~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~ 261 (524)
T PRK06188 186 VMGTHRSIATMAQI---QLAEWEWPADPRFLMCTPLSHAGGAFFLPTLLRGGTVIVLA-KFDPAEVLRAIEEQRITATFL 261 (524)
T ss_pred eeeehHHHHHHHHH---HHhhcCCCcCcEEEEecCchhhhhHHHHHHHHcCCEEEEcC-CCCHHHHHHHHHHhCCEEEEe
Confidence 45788887765543 33445788899998888877666666778888898888775 466788899999999999988
Q ss_pred ccccHHHH
Q 043601 133 VPELWERV 140 (488)
Q Consensus 133 ~~~~~~~~ 140 (488)
.+.....+
T Consensus 262 ~P~~l~~l 269 (524)
T PRK06188 262 VPTMIYAL 269 (524)
T ss_pred hHHHHHHH
Confidence 76665544
No 173
>PRK08316 acyl-CoA synthetase; Validated
Probab=50.10 E-value=1.7e+02 Score=29.55 Aligned_cols=84 Identities=11% Similarity=0.104 Sum_probs=60.6
Q ss_pred cceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcc--hHHHHHHHHHcCCeEeecCCCCCHHHHHHHHhhcCCeEE
Q 043601 53 ESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQ--FPICLLGVIAIGGIATTANPVYTVSELSKQVKDSSPKLV 130 (488)
Q Consensus 53 ~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~--~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~v 130 (488)
..+|++.+... ++......++++++++....|-... +...+++++..|+..++.+ ..+.+.+...+++.++.++
T Consensus 189 v~~s~~~l~~~---~~~~~~~~~~~~~~~~~~~~p~~h~~g~~~~~~~~~~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~ 264 (523)
T PRK08316 189 AMLTHRALIAE---YVSCIVAGDMSADDIPLHALPLYHCAQLDVFLGPYLYVGATNVILD-APDPELILRTIEAERITSF 264 (523)
T ss_pred EEEecHHHHHH---HHHHHHHhCCCCCceEEEccCCchhhhHHHHHHHHHhcCceEEEec-CCCHHHHHHHHHHhCCeEE
Confidence 46888887654 3334455678999998887765432 2344667788899988874 4578889999999999998
Q ss_pred EEccccHHHH
Q 043601 131 VTVPELWERV 140 (488)
Q Consensus 131 i~~~~~~~~~ 140 (488)
++.+.....+
T Consensus 265 ~~~P~~~~~l 274 (523)
T PRK08316 265 FAPPTVWISL 274 (523)
T ss_pred EeCHHHHHHH
Confidence 8877665444
No 174
>TIGR01139 cysK cysteine synthase A. This model distinguishes cysteine synthase A (CysK) from cysteine synthase B (CysM). CysM differs in having a broader specificity that also allows the use of thiosulfate to produce cysteine thiosulfonate.
Probab=49.16 E-value=1.5e+02 Score=27.54 Aligned_cols=91 Identities=13% Similarity=0.022 Sum_probs=56.4
Q ss_pred CceEEEeCCCCcceeHHHHHHHHHHHHHHHHHcC-CCCCCEEEEEcCCCcchHHHHHHHHHcCCeEeecCCCCCHHHHHH
Q 043601 42 SKSALIDADSGESLTFSQFKSIVIKVSHGFRHLG-VTKHDVVLIFAPNSIQFPICLLGVIAIGGIATTANPVYTVSELSK 120 (488)
Q Consensus 42 ~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g-~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~ 120 (488)
.++.+-....+.+-|++. +.+..+.....+.| +.+|++| +....+-.-....+++.+.|..+..+-|....+....
T Consensus 21 ~~i~~K~E~~nptGS~K~--R~a~~~l~~a~~~g~~~~g~~v-v~aSsGN~g~alA~~a~~~Gl~~~i~vp~~~~~~k~~ 97 (298)
T TIGR01139 21 ANVFVKLEGRNPSGSVKD--RIALNMIWDAEKRGLLKPGKTI-VEPTSGNTGIALAMVAAARGYKLILTMPETMSIERRK 97 (298)
T ss_pred ceEEEEEcccCCCCcchH--HHHHHHHHHHHHcCCCCCCCEE-EEeCCChhHHHHHHHHHHcCCeEEEEeCCccCHHHHH
Confidence 355555543333444443 22222233344445 4677776 5555566667777788889987666666555455678
Q ss_pred HHhhcCCeEEEEccc
Q 043601 121 QVKDSSPKLVVTVPE 135 (488)
Q Consensus 121 ~l~~~~~~~vi~~~~ 135 (488)
.++..++++++++..
T Consensus 98 ~~~~~GA~v~~~~~~ 112 (298)
T TIGR01139 98 LLKAYGAELVLTPGA 112 (298)
T ss_pred HHHHcCCEEEEECCC
Confidence 899999999999864
No 175
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=48.58 E-value=1e+02 Score=29.89 Aligned_cols=58 Identities=12% Similarity=0.106 Sum_probs=38.5
Q ss_pred HHcCCCCCCEEEEEcCCCcchHHHHHHHHHcCCeEeecCCC-----CCHHHHHHHHhhcCCeEEEEc
Q 043601 72 RHLGVTKHDVVLIFAPNSIQFPICLLGVIAIGGIATTANPV-----YTVSELSKQVKDSSPKLVVTV 133 (488)
Q Consensus 72 ~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~vi~~ 133 (488)
...++++||.|.+-.+ .+.....++...|+.++.++.+ .+.+.+...+.. +.++|+..
T Consensus 64 ~~~~~~~Gd~Viv~~~---t~~~~~~~~~~~G~~~v~~d~d~~~~~~d~~~le~~i~~-~tk~i~~~ 126 (375)
T PRK11706 64 LLLDIQPGDEVIMPSY---TFVSTANAFVLRGAKIVFVDIRPDTMNIDETLIEAAITP-KTRAIVPV 126 (375)
T ss_pred HHhCCCCCCEEEECCC---CcHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhcCC-CCeEEEEe
Confidence 3446789998877544 3455566777889887777532 457777777654 56766643
No 176
>TIGR01136 cysKM cysteine synthases. This model discriminates cysteine synthases (EC 2.5.1.47) (both CysK and CysM) from cystathionine beta-synthase, a protein found primarily in eukaryotes and carrying a C-terminal CBS domain lacking from this protein. Bacterial proteins lacking the CBS domain but otherwise showing resemblamnce to cystathionine beta-synthases and considerable phylogenetic distance from known cysteine synthases were excluded from the seed and score below the trusted cutoff.
Probab=48.46 E-value=2.3e+02 Score=26.37 Aligned_cols=91 Identities=14% Similarity=0.049 Sum_probs=57.6
Q ss_pred CceEEEeCCCCcceeHHHHHHHHHHHHHHHHHcC-CCCCCEEEEEcCCCcchHHHHHHHHHcCCeEeecCCCCCHHHHHH
Q 043601 42 SKSALIDADSGESLTFSQFKSIVIKVSHGFRHLG-VTKHDVVLIFAPNSIQFPICLLGVIAIGGIATTANPVYTVSELSK 120 (488)
Q Consensus 42 ~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g-~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~ 120 (488)
.++.+-....+.+-||+. +.....+. .+.+.| +.+|+.| +....+-.-....++|...|..+..+-|...+.....
T Consensus 22 ~~i~~K~E~~~ptGS~K~-R~a~~~~~-~a~~~g~~~~g~~v-v~aSsGN~g~alA~~a~~~G~~~~i~vp~~~~~~k~~ 98 (299)
T TIGR01136 22 ARVLAKLEGRNPSGSVKD-RIALSMIE-DAEKRGLLKPGDTI-IEATSGNTGIALAMVAAAKGYKLILTMPETMSLERRK 98 (299)
T ss_pred ceEEEEEcccCCCCCccH-HHHHHHHH-HHHHcCCCCCCCEE-EEeCCChHHHHHHHHHHHcCCcEEEEECCCCCHHHHH
Confidence 355555443334456664 22233333 344445 3677766 4566666777777888889987666666655556677
Q ss_pred HHhhcCCeEEEEccc
Q 043601 121 QVKDSSPKLVVTVPE 135 (488)
Q Consensus 121 ~l~~~~~~~vi~~~~ 135 (488)
.++..++++++++..
T Consensus 99 ~~~~~GA~v~~~~~~ 113 (299)
T TIGR01136 99 LLRAYGAELILTPAE 113 (299)
T ss_pred HHHHcCCEEEEeCCC
Confidence 899999999998754
No 177
>cd02069 methionine_synthase_B12_BD B12 binding domain of methionine synthase. This domain binds methylcobalamin, which it uses as an intermediate methyl carrier from methyltetrahydrofolate (CH3H4folate) to homocysteine (Hcy).
Probab=47.72 E-value=1.8e+02 Score=25.54 Aligned_cols=95 Identities=13% Similarity=0.141 Sum_probs=0.0
Q ss_pred CCCcEEEEecch-hhHHhHHHHHHHHhhCCceEEEc-CCCCHHHHHHHHHhcCccEEEec---HHHHHHHHhcCCccCCC
Q 043601 232 ALDYVTLCVLPM-FHVFGLSFVVYAQLQKGNCVVSM-RKFDLETALRAIEKYRVTHWWVV---PPIILALAKNVSLVKKF 306 (488)
Q Consensus 232 ~~~~~~~~~~~~-~~~~~~~~~~~~~l~~G~~~~~~-~~~~~~~~~~~l~~~~~t~l~~~---p~~~~~l~~~~~~~~~~ 306 (488)
..+.+++.+.+- .|..|....-..--..|-.++.. ....++++.+.+++.+++++..+ ++.+..+.+........
T Consensus 87 ~~~~vvl~t~~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~vp~e~~v~~~~~~~~~~V~lS~~~~~~~~~~~~~i~~L~~~ 166 (213)
T cd02069 87 SKGKIVLATVKGDVHDIGKNLVGVILSNNGYEVIDLGVMVPIEKILEAAKEHKADIIGLSGLLVPSLDEMVEVAEEMNRR 166 (213)
T ss_pred CCCeEEEEeCCCchhHHHHHHHHHHHHhCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEccchhccHHHHHHHHHHHHhc
Q ss_pred CCCCccEEEEccCCCcHHHHHH
Q 043601 307 DLSSLKGIGSGAAPLRKELVEE 328 (488)
Q Consensus 307 ~l~~lr~v~~~G~~l~~~~~~~ 328 (488)
.+ .++ ++.||.+++++..+.
T Consensus 167 ~~-~~~-i~vGG~~~~~~~~~~ 186 (213)
T cd02069 167 GI-KIP-LLIGGAATSRKHTAV 186 (213)
T ss_pred CC-CCe-EEEEChhcCHHHHhh
No 178
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=47.25 E-value=1.8e+02 Score=29.28 Aligned_cols=97 Identities=19% Similarity=0.154 Sum_probs=66.3
Q ss_pred CCCceEEEeCCCC-------cceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcc--hHHHHHHHHHcCCeEeecC
Q 043601 40 YGSKSALIDADSG-------ESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQ--FPICLLGVIAIGGIATTAN 110 (488)
Q Consensus 40 ~p~~~a~~~~~~~-------~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~--~~~~~lA~~~~G~~~v~l~ 110 (488)
.++.++++...+| ..+|++.+...+.... ....+++++|++....|-... +...+++.+..|+..+..+
T Consensus 159 ~~~~~a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~--~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~~l~~G~~~~~~~ 236 (508)
T TIGR02262 159 QADDPAFWLYSSGSTGMPKGVVHTHSNPYWTAELYA--RNTLGIREDDVVFSAAKLFFAYGLGNALTFPMSVGATTVLMG 236 (508)
T ss_pred CCCCcEEEEeCCCCCCCCcEEEEechhHHHHHHHHh--HHhcCCCCCCEEEEcCchHHHHHHHHHHHHHHHcCceEEEeC
Confidence 3566776532222 5678888876543321 233488999988777765433 3344566788898888777
Q ss_pred CCCCHHHHHHHHhhcCCeEEEEccccHH
Q 043601 111 PVYTVSELSKQVKDSSPKLVVTVPELWE 138 (488)
Q Consensus 111 ~~~~~~~l~~~l~~~~~~~vi~~~~~~~ 138 (488)
+..+...+...++..++.+++..+....
T Consensus 237 ~~~~~~~~~~~i~~~~~t~~~~~P~~~~ 264 (508)
T TIGR02262 237 ERPTPDAVFDRLRRHQPTIFYGVPTLYA 264 (508)
T ss_pred CCCCHHHHHHHHHHHCCcEEecchHHHH
Confidence 7678888999999999999998776544
No 179
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=46.94 E-value=1.9e+02 Score=30.94 Aligned_cols=94 Identities=13% Similarity=0.078 Sum_probs=62.5
Q ss_pred CCCceEEEeCC---C----CcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCC--cchHHHHHHHHHcCCeEeecC
Q 043601 40 YGSKSALIDAD---S----GESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNS--IQFPICLLGVIAIGGIATTAN 110 (488)
Q Consensus 40 ~p~~~a~~~~~---~----~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~--~~~~~~~lA~~~~G~~~v~l~ 110 (488)
.++..|++-.. . +..+|++.+...+..+.. ..++.++|++...+|-. ..+...+++.+..|+..+..+
T Consensus 363 ~~~d~a~i~~TSGTTG~PKgv~~sh~~l~~~~~~~~~---~~~~~~~d~~l~~~Pl~h~~g~~~~~~~~l~~G~~vv~~~ 439 (718)
T PRK08043 363 QPEDAALILFTSGSEGHPKGVVHSHKSLLANVEQIKT---IADFTPNDRFMSALPLFHSFGLTVGLFTPLLTGAEVFLYP 439 (718)
T ss_pred CCCCeEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHH---hhCCCccCeEEEcCcchhhhhhHHHHHHHHHcCCEEEEeC
Confidence 45666664221 1 256899888776655443 34788999988877753 334456788888999888766
Q ss_pred CCCCHHHHHHHHhhcCCeEEEEcccc
Q 043601 111 PVYTVSELSKQVKDSSPKLVVTVPEL 136 (488)
Q Consensus 111 ~~~~~~~l~~~l~~~~~~~vi~~~~~ 136 (488)
.......+...+++.++..++..+..
T Consensus 440 ~~~~~~~~~~~i~~~~vt~~~~~p~~ 465 (718)
T PRK08043 440 SPLHYRIVPELVYDRNCTVLFGTSTF 465 (718)
T ss_pred CcccHHHHHHHHHhcCCeEEEchHHH
Confidence 44455666777888888877755443
No 180
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=46.83 E-value=1.8e+02 Score=27.12 Aligned_cols=60 Identities=13% Similarity=0.035 Sum_probs=45.3
Q ss_pred cC-CCCCCEEEEEcCCCcchHHHHHHHHHcCCeEeecCCCCCHHHHHHHHhhcCCeEEEEcc
Q 043601 74 LG-VTKHDVVLIFAPNSIQFPICLLGVIAIGGIATTANPVYTVSELSKQVKDSSPKLVVTVP 134 (488)
Q Consensus 74 ~g-~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~ 134 (488)
.| +++|+ ..|-...+-.-+...+.|...|..++.+-|..-..+...+++.+++++++++.
T Consensus 56 ~G~l~pG~-tIVE~TSGNTGI~LA~vaa~~Gy~~iivmP~~~S~er~~~l~a~GAevi~t~~ 116 (300)
T COG0031 56 RGLLKPGG-TIVEATSGNTGIALAMVAAAKGYRLIIVMPETMSQERRKLLRALGAEVILTPG 116 (300)
T ss_pred cCCCCCCC-EEEEcCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEcCC
Confidence 45 88888 44545555566777777788898777766666566778899999999999997
No 181
>COG2236 Predicted phosphoribosyltransferases [General function prediction only]
Probab=46.68 E-value=33 Score=29.46 Aligned_cols=33 Identities=12% Similarity=0.216 Sum_probs=29.3
Q ss_pred cceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEE
Q 043601 53 ESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIF 85 (488)
Q Consensus 53 ~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~ 85 (488)
.-+||.++++.+.++|..+.+.|.+|.-.||+.
T Consensus 5 ~~vSw~~I~~~~~~lA~kI~~s~~~PDvIiaia 37 (192)
T COG2236 5 LYVSWEEIHRLCRALAEKIRASGFKPDVIVAIA 37 (192)
T ss_pred EEecHHHHHHHHHHHHHHHHHcCCCCCEEEEEc
Confidence 468999999999999999999999988777763
No 182
>PRK11761 cysM cysteine synthase B; Provisional
Probab=46.06 E-value=2.5e+02 Score=26.12 Aligned_cols=90 Identities=8% Similarity=-0.025 Sum_probs=59.6
Q ss_pred CceEEEeCCCCcceeHHHHHHHHHHHHHHHHHcC-CCCCCEEEEEcCCCcchHHHHHHHHHcCCeEeecCCCCCHHHHHH
Q 043601 42 SKSALIDADSGESLTFSQFKSIVIKVSHGFRHLG-VTKHDVVLIFAPNSIQFPICLLGVIAIGGIATTANPVYTVSELSK 120 (488)
Q Consensus 42 ~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g-~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~ 120 (488)
.++.+-....+.+=||+. +-+..+...+.+.| +++|+.|.. ...+-.-....++|...|..+..+-|...+.....
T Consensus 27 ~~i~~K~E~~nptGS~K~--R~a~~~~~~a~~~g~~~~g~~vv~-aSsGN~g~alA~~a~~~G~~~~i~~p~~~~~~k~~ 103 (296)
T PRK11761 27 NTILAKLEGNNPAGSVKD--RPALSMIVQAEKRGEIKPGDTLIE-ATSGNTGIALAMIAAIKGYRMKLIMPENMSQERRA 103 (296)
T ss_pred CEEEEEEcccCCCCCchh--HHHHHHHHHHHHcCCCCCCCEEEE-eCCChHHHHHHHHHHHcCCCEEEEECCCCCHHHHH
Confidence 356665554345556665 33333333444455 467776654 55566677777888889986666666655567788
Q ss_pred HHhhcCCeEEEEcc
Q 043601 121 QVKDSSPKLVVTVP 134 (488)
Q Consensus 121 ~l~~~~~~~vi~~~ 134 (488)
.++..++++++++.
T Consensus 104 ~~~~~GA~v~~~~~ 117 (296)
T PRK11761 104 AMRAYGAELILVPK 117 (296)
T ss_pred HHHHcCCEEEEeCC
Confidence 99999999999985
No 183
>PLN02556 cysteine synthase/L-3-cyanoalanine synthase
Probab=45.94 E-value=1.4e+02 Score=28.90 Aligned_cols=62 Identities=19% Similarity=0.093 Sum_probs=47.2
Q ss_pred HcC-CCCCCEEEEEcCCCcchHHHHHHHHHcCCeEeecCCCCCHHHHHHHHhhcCCeEEEEcc
Q 043601 73 HLG-VTKHDVVLIFAPNSIQFPICLLGVIAIGGIATTANPVYTVSELSKQVKDSSPKLVVTVP 134 (488)
Q Consensus 73 ~~g-~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~ 134 (488)
+.| +++|....+....+-.-....++|...|..+..+-|..........++..++++++++.
T Consensus 103 ~~G~i~pG~~~vV~aSsGN~G~alA~~a~~~G~~~~ivvp~~~~~~k~~~lr~~GA~Vi~~~~ 165 (368)
T PLN02556 103 KKNLITPGKTTLIEPTSGNMGISLAFMAAMKGYKMILTMPSYTSLERRVTMRAFGAELVLTDP 165 (368)
T ss_pred HcCCcCCCCCEEEEeCCchHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECC
Confidence 344 66775445556677777888888899998777776766666778899999999999874
No 184
>PRK08308 acyl-CoA synthetase; Validated
Probab=45.56 E-value=2.5e+02 Score=27.41 Aligned_cols=84 Identities=7% Similarity=0.140 Sum_probs=60.3
Q ss_pred cceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCc--chHHHHHHHHHcCCeEeecCCCCCHHHHHHHHhhcCCeEE
Q 043601 53 ESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSI--QFPICLLGVIAIGGIATTANPVYTVSELSKQVKDSSPKLV 130 (488)
Q Consensus 53 ~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~v 130 (488)
..+|++.+...+..+... .++..++++....|-.. .++..+++.+..|+..+..+ ..++..+...++..++.++
T Consensus 119 v~~s~~~l~~~~~~~~~~---~~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~l~~~~~t~~ 194 (414)
T PRK08308 119 IRRSWTEIDREIEAYNEA---LNCEQDETPIVACPVTHSYGLICGVLAALTRGSKPVIIT-NKNPKFALNILRNTPQHIL 194 (414)
T ss_pred EEEehHhHHHHHHHHHHh---hCCCcccEEEEecCcHHHHHHHHHHHHHHHcCCEEEecC-CCCHHHHHHHHHHhCCeEE
Confidence 468999887666555443 45678888877776553 33456788889999887664 4567778888999999988
Q ss_pred EEccccHHHH
Q 043601 131 VTVPELWERV 140 (488)
Q Consensus 131 i~~~~~~~~~ 140 (488)
+..+.....+
T Consensus 195 ~~~P~~~~~l 204 (414)
T PRK08308 195 YAVPLMLHIL 204 (414)
T ss_pred EcCHHHHHHH
Confidence 8776665544
No 185
>TIGR02898 spore_YhcN_YlaJ sporulation lipoprotein, YhcN/YlaJ family. YhcN and YlaJ are predicted lipoproteins that have been detected as spore proteins but not vegetative proteins in Bacillus subtilis. Both appear to be expressed under control of the RNA polymerase sigma-G factor. The YlaJ-like members of this family have a low-complexity, strongly acidic 40-residue C-terminal domain that is not included in the seed alignment for this model. A portion of the low-complexity region between the lipoprotein signal sequence and the main conserved region of the protein family was also excised from the seed alignment.
Probab=45.38 E-value=53 Score=27.22 Aligned_cols=49 Identities=12% Similarity=0.083 Sum_probs=31.7
Q ss_pred eHhHHHhcCCCeeeeEEEeecCCCCCceEEEEEEeCCCC-CCCHHHHHHHHHhhc
Q 043601 433 ELEGVLVSHPEILDAVVIPFPDPEAGEVPIAYVVRSPNS-SLTKEDVQKFVANDS 486 (488)
Q Consensus 433 ~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~-~~~~~~i~~~~~~~l 486 (488)
.|.+.+.++|+|.+|.++...+. .++++ .++.+. ....+++++.+.+.+
T Consensus 58 ~Ia~~v~~v~~V~dA~vvVtg~~----A~Vgv-~~~~~~~~~~~~~iK~~Va~~V 107 (158)
T TIGR02898 58 EIASEAAKVKGVKDATVVITGNY----AYVGV-DLTNGLEGSVTDELKEKVAETV 107 (158)
T ss_pred HHHHHHhcCCCCceEEEEEECCE----EEEEE-EcCCCcchhhHHHHHHHHHHHH
Confidence 77888889999999999977653 33333 333332 233566776666543
No 186
>PLN03013 cysteine synthase
Probab=45.05 E-value=2.5e+02 Score=27.82 Aligned_cols=81 Identities=15% Similarity=0.029 Sum_probs=55.1
Q ss_pred cceeHHHHHHHHHHHHHHHHHcC-CCCCCEEEEEcCCCcchHHHHHHHHHcCCeEeecCCCCCHHHHHHHHhhcCCeEEE
Q 043601 53 ESLTFSQFKSIVIKVSHGFRHLG-VTKHDVVLIFAPNSIQFPICLLGVIAIGGIATTANPVYTVSELSKQVKDSSPKLVV 131 (488)
Q Consensus 53 ~~~Ty~el~~~~~~la~~L~~~g-~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi 131 (488)
-+-|+++ .-....+.. ..+.| +++|....+....+-.-+...++|...|..++.+-|..........++..++++++
T Consensus 149 PtGSfKd-R~A~~~l~~-a~~~G~l~pG~~~VVeaSSGN~G~ALA~~a~~~G~~~~VvvP~~~s~~K~~~ira~GAeVi~ 226 (429)
T PLN03013 149 PCCSVKD-RIGYSMVTD-AEQKGFISPGKSVLVEPTSGNTGIGLAFIAASRGYRLILTMPASMSMERRVLLKAFGAELVL 226 (429)
T ss_pred CccccHH-HHHHHHHHH-HHHcCCcCCCCcEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCCcHHHHHHHHHcCCEEEE
Confidence 4455665 222233333 34445 57885555666777777778888888998666665666666778899999999999
Q ss_pred Eccc
Q 043601 132 TVPE 135 (488)
Q Consensus 132 ~~~~ 135 (488)
++..
T Consensus 227 v~~~ 230 (429)
T PLN03013 227 TDPA 230 (429)
T ss_pred ECCC
Confidence 9754
No 187
>PRK11493 sseA 3-mercaptopyruvate sulfurtransferase; Provisional
Probab=44.97 E-value=33 Score=31.69 Aligned_cols=53 Identities=8% Similarity=0.108 Sum_probs=43.9
Q ss_pred cceeHHHHHHH-----HHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHHcCCe
Q 043601 53 ESLTFSQFKSI-----VIKVSHGFRHLGVTKHDVVLIFAPNSIQFPICLLGVIAIGGI 105 (488)
Q Consensus 53 ~~~Ty~el~~~-----~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~ 105 (488)
..+.|.++.+. ...+...|.+.|+.+++.|.++|.++.....+++++..+|..
T Consensus 200 ~~i~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~ii~yC~~G~~A~~~~~~l~~~G~~ 257 (281)
T PRK11493 200 LNVPWTELVREGELKTTDELDAIFFGRGVSFDRPIIASCGSGVTAAVVVLALATLDVP 257 (281)
T ss_pred CCCCHHHhcCCCCcCCHHHHHHHHHhcCCCCCCCEEEECCcHHHHHHHHHHHHHcCCC
Confidence 35778887642 466777788889999999999999999999999999989975
No 188
>PRK05850 acyl-CoA synthetase; Validated
Probab=44.66 E-value=3e+02 Score=28.30 Aligned_cols=85 Identities=14% Similarity=0.121 Sum_probs=59.5
Q ss_pred hhhccHHHHHHhhHHhhhhhhc--CCCCcEEEEecchhhHHhHHHHHHHHhhCCceEEEcCC----CCHHHHHHHHHhcC
Q 043601 209 AILTHKNFIASSLMTAMDQELA--GALDYVTLCVLPMFHVFGLSFVVYAQLQKGNCVVSMRK----FDLETALRAIEKYR 282 (488)
Q Consensus 209 v~~t~~~l~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~~~----~~~~~~~~~l~~~~ 282 (488)
..+|+..+...+.. ....+. ..+++++...++... .+...+++++..|+..+..+. .....+...++..+
T Consensus 34 ~~lty~eL~~~v~~--~A~~L~~~g~~gd~V~l~~~n~~--~~~~~~lA~~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~ 109 (578)
T PRK05850 34 ETLTWSQLYRRTLN--VAEELRRHGSTGDRAVILAPQGL--EYIVAFLGALQAGLIAVPLSVPQGGAHDERVSAVLRDTS 109 (578)
T ss_pred eeecHHHHHHHHHH--HHHHHHHhCCCCCEEEEEcCCcc--cHHHHHHHHHHcCceEEecCCCCccchHHHHHHHHHhcC
Confidence 35788877765322 222221 246788877777553 333668899999999998864 35678899999999
Q ss_pred ccEEEecHHHHHHHH
Q 043601 283 VTHWWVVPPIILALA 297 (488)
Q Consensus 283 ~t~l~~~p~~~~~l~ 297 (488)
+..++..+.....+.
T Consensus 110 ~~~il~~~~~~~~~~ 124 (578)
T PRK05850 110 PSVVLTTSAVVDDVT 124 (578)
T ss_pred CCEEEEcHHHHHHHH
Confidence 999999887766553
No 189
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=44.41 E-value=1.2e+02 Score=31.16 Aligned_cols=88 Identities=11% Similarity=0.053 Sum_probs=67.4
Q ss_pred hhhhccHHHHHHhhHHhhhhhhc-----CCCCcEEEEecchhhHHhHHHHHHHHhhCCceEEEcCC-CCHHHHHHHHHhc
Q 043601 208 GAILTHKNFIASSLMTAMDQELA-----GALDYVTLCVLPMFHVFGLSFVVYAQLQKGNCVVSMRK-FDLETALRAIEKY 281 (488)
Q Consensus 208 ~v~~t~~~l~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~l~~~ 281 (488)
+..+|+..+...+.. ....+. ..++|++....|-...+. ...++++..|+.+....+ ++..++...++..
T Consensus 43 g~~~T~~e~~~~~~r--~A~~L~~~~~~i~~gDvV~i~~pNs~~~~--~~~la~~~~Ga~~~~~Np~~~~~ei~~~~~~s 118 (537)
T KOG1176|consen 43 GRELTYSELHDRCRR--LASALSELGLGIKKGDVVGILAPNTPEFV--ELALAVPMAGAVLNPLNPRLTASEIAKQLKDS 118 (537)
T ss_pred CcEEcHHHHHHHHHH--HHHHHHhcCCCCCCCCEEEEEcCCCHHHH--HHHHHHHHcCccccccCcccCHHHHHHHHHhc
Confidence 678888888776332 323332 577999999988766443 456788888999887754 7899999999999
Q ss_pred CccEEEecHHHHHHHHhc
Q 043601 282 RVTHWWVVPPIILALAKN 299 (488)
Q Consensus 282 ~~t~l~~~p~~~~~l~~~ 299 (488)
++.++++....+..+...
T Consensus 119 ~~kiif~d~~~~~~i~~~ 136 (537)
T KOG1176|consen 119 KPKLIFVDEDFYDKISEA 136 (537)
T ss_pred CCeEEEEcCchHHHHHHH
Confidence 999999998888877554
No 190
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=44.16 E-value=2.3e+02 Score=28.81 Aligned_cols=97 Identities=12% Similarity=0.039 Sum_probs=66.4
Q ss_pred CCCceEEEeCCCC-------cceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcc--hHHHHHHHHHcCCeEeecC
Q 043601 40 YGSKSALIDADSG-------ESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQ--FPICLLGVIAIGGIATTAN 110 (488)
Q Consensus 40 ~p~~~a~~~~~~~-------~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~--~~~~~lA~~~~G~~~v~l~ 110 (488)
.++.+|++-..+| ..+|++.+...+..... ..++.++|++....|-... ++..+++.+..|+..+..+
T Consensus 188 ~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~---~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~i~~~~ 264 (546)
T PRK08314 188 GPDDLAVLPYTSGTTGVPKGCMHTHRTVMANAVGSVL---WSNSTPESVVLAVLPLFHVTGMVHSMNAPIYAGATVVLMP 264 (546)
T ss_pred CCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHH---hhCCCCCceEEEEcCchHHHHHHHHHHHHHHcCCeEEecC
Confidence 4567776532212 46889888776554433 3467888988777664322 3455678889999888775
Q ss_pred CCCCHHHHHHHHhhcCCeEEEEccccHHHH
Q 043601 111 PVYTVSELSKQVKDSSPKLVVTVPELWERV 140 (488)
Q Consensus 111 ~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 140 (488)
..+...+...+++.++.++...+.....+
T Consensus 265 -~~~~~~~~~~i~~~~~t~~~~~p~~~~~l 293 (546)
T PRK08314 265 -RWDREAAARLIERYRVTHWTNIPTMVVDF 293 (546)
T ss_pred -CCCHHHHHHHHHHhcCceecccHHHHHHH
Confidence 46788888999999999888776655443
No 191
>PRK07638 acyl-CoA synthetase; Validated
Probab=44.12 E-value=2.5e+02 Score=28.09 Aligned_cols=85 Identities=12% Similarity=0.124 Sum_probs=61.1
Q ss_pred cceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcc-hHHHHHHHHHcCCeEeecCCCCCHHHHHHHHhhcCCeEEE
Q 043601 53 ESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQ-FPICLLGVIAIGGIATTANPVYTVSELSKQVKDSSPKLVV 131 (488)
Q Consensus 53 ~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi 131 (488)
..+|.+.+...+...+ ...+++++|++....+-... ++...+..+..|+..+.. +..++..+...++..++.++.
T Consensus 161 v~~s~~~~~~~~~~~~---~~~~~~~~d~~~~~~~l~~~~~l~~~~~~l~~g~~~~~~-~~~~~~~~~~~i~~~~~t~~~ 236 (487)
T PRK07638 161 FLRAQQSWLHSFDCNV---HDFHMKREDSVLIAGTLVHSLFLYGAISTLYVGQTVHLM-RKFIPNQVLDKLETENISVMY 236 (487)
T ss_pred EEEecHHHHHHHHHHH---HhcCcCCCCEEEEeecchHHHHHHHHHHHHccCcEEEEc-CCCCHHHHHHHHHHcCCeEEE
Confidence 4678887766554433 34478899998876654433 345566677889888765 567888899999999999999
Q ss_pred EccccHHHHh
Q 043601 132 TVPELWERVK 141 (488)
Q Consensus 132 ~~~~~~~~~~ 141 (488)
..+.....+.
T Consensus 237 ~~P~~~~~l~ 246 (487)
T PRK07638 237 TVPTMLESLY 246 (487)
T ss_pred eCcHHHHHHH
Confidence 8877765554
No 192
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=44.07 E-value=2.7e+02 Score=28.41 Aligned_cols=97 Identities=14% Similarity=0.231 Sum_probs=66.0
Q ss_pred CCCceEEEeCCCC-------cceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcc--hHHHHHHHHHcCCeEeecC
Q 043601 40 YGSKSALIDADSG-------ESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQ--FPICLLGVIAIGGIATTAN 110 (488)
Q Consensus 40 ~p~~~a~~~~~~~-------~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~--~~~~~lA~~~~G~~~v~l~ 110 (488)
.++.+|++-..+| ..+|+..+...+... ....++++++++....|-+.. ++..+++.+..|+..+..+
T Consensus 195 ~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~---~~~~~~~~~~~~l~~~p~~h~~g~~~~~~~~l~~G~~~~~~~ 271 (547)
T PRK13295 195 GPDDVTQLIYTSGTTGEPKGVMHTANTLMANIVPY---AERLGLGADDVILMASPMAHQTGFMYGLMMPVMLGATAVLQD 271 (547)
T ss_pred CCcceeEEEeCCCCCCCCCEEEeccHHHHHHHHHH---HHHhCCCCCCeEEEecCchhhhhHHHHHHHHHHcCCeEEeCC
Confidence 3466666532212 467888876554443 344578899998887776532 3455778888999887654
Q ss_pred CCCCHHHHHHHHhhcCCeEEEEccccHHHH
Q 043601 111 PVYTVSELSKQVKDSSPKLVVTVPELWERV 140 (488)
Q Consensus 111 ~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 140 (488)
..+...+...+++.++..++........+
T Consensus 272 -~~~~~~~~~~l~~~~vt~~~~~p~~~~~l 300 (547)
T PRK13295 272 -IWDPARAAELIRTEGVTFTMASTPFLTDL 300 (547)
T ss_pred -CCCHHHHHHHHHHcCCcEEEecHHHHHHH
Confidence 56788889999999999888766655444
No 193
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=43.61 E-value=2.3e+02 Score=29.15 Aligned_cols=86 Identities=17% Similarity=0.206 Sum_probs=59.3
Q ss_pred cceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcch-HHHHHHHHHcCCeEeecCCCCCHHHHHHHHhhcCCeEEE
Q 043601 53 ESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQF-PICLLGVIAIGGIATTANPVYTVSELSKQVKDSSPKLVV 131 (488)
Q Consensus 53 ~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~-~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi 131 (488)
..+|++.+...+..+. .....++.+++++...+|-...+ +...++.+..|...+...+..+...+...++..++.+++
T Consensus 199 v~~s~~~l~~~~~~~~-~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~l~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~ 277 (576)
T PRK05620 199 VVYSHRSLYLQSLSLR-TTDSLAVTHGESFLCCVPIYHVLSWGVPLAAFMSGTPLVFPGPDLSAPTLAKIIATAMPRVAH 277 (576)
T ss_pred EEEEcHHHHHHHHHhh-hhhhcCCCCCCeEEEeCChHHhhhhHHHHHHHhcCceEEecCCCCCHHHHHHHHHHhcCceee
Confidence 4678887754433322 12235788899988877755332 234567777888877766677889999999999999988
Q ss_pred EccccHHH
Q 043601 132 TVPELWER 139 (488)
Q Consensus 132 ~~~~~~~~ 139 (488)
..+.....
T Consensus 278 ~~P~~~~~ 285 (576)
T PRK05620 278 GVPTLWIQ 285 (576)
T ss_pred ecCHHHHH
Confidence 76655443
No 194
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=43.59 E-value=2.2e+02 Score=24.69 Aligned_cols=98 Identities=16% Similarity=0.204 Sum_probs=0.0
Q ss_pred CCCcEEEEecc-hhhHHhHHHHHHHHhhCCceEEEc-CCCCHHHHHHHHHhcCccEEEec---HHHHHHHHhcCCccCCC
Q 043601 232 ALDYVTLCVLP-MFHVFGLSFVVYAQLQKGNCVVSM-RKFDLETALRAIEKYRVTHWWVV---PPIILALAKNVSLVKKF 306 (488)
Q Consensus 232 ~~~~~~~~~~~-~~~~~~~~~~~~~~l~~G~~~~~~-~~~~~~~~~~~l~~~~~t~l~~~---p~~~~~l~~~~~~~~~~ 306 (488)
....+++.+.+ =.|..|.......--..|-.++.. ....++++.+.+.+.+++++..+ +..+..+.+.....+..
T Consensus 81 ~~~~vl~~~~~gd~H~lG~~~v~~~l~~~G~~vi~lG~~~p~~~l~~~~~~~~~d~v~lS~~~~~~~~~~~~~i~~lr~~ 160 (201)
T cd02070 81 KKGKVVIGTVEGDIHDIGKNLVATMLEANGFEVIDLGRDVPPEEFVEAVKEHKPDILGLSALMTTTMGGMKEVIEALKEA 160 (201)
T ss_pred CCCeEEEEecCCccchHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEeccccccHHHHHHHHHHHHHC
Q ss_pred CCCCccEEEEccCCCcHHHHHHH
Q 043601 307 DLSSLKGIGSGAAPLRKELVEEC 329 (488)
Q Consensus 307 ~l~~lr~v~~~G~~l~~~~~~~~ 329 (488)
....--.++.||..++.+..+.+
T Consensus 161 ~~~~~~~i~vGG~~~~~~~~~~~ 183 (201)
T cd02070 161 GLRDKVKVMVGGAPVNQEFADEI 183 (201)
T ss_pred CCCcCCeEEEECCcCCHHHHHHc
No 195
>PRK09274 peptide synthase; Provisional
Probab=42.98 E-value=2.4e+02 Score=28.86 Aligned_cols=99 Identities=10% Similarity=0.023 Sum_probs=63.7
Q ss_pred CCCEEEEEcccCCC-CCCchhhhccHHHHHHhhHHh-hhhhhcCCCCcEEEEecchhhHHhHHHHHHHHhhCCceEEEcC
Q 043601 190 QTDTAALLYSSGTT-GVGKGAILTHKNFIASSLMTA-MDQELAGALDYVTLCVLPMFHVFGLSFVVYAQLQKGNCVVSMR 267 (488)
Q Consensus 190 ~~~~a~i~~TSGtT-G~pK~v~~t~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~~ 267 (488)
++.++++....+++ ...+...+|...+...+.... .....+..+++++...++-... +...+++++..|+..+.++
T Consensus 20 p~~~a~~~~~~~~~~~~~~~~~~Ty~~l~~~~~~~A~~L~~~g~~~gd~V~~~~~n~~~--~~~~~la~~~~G~~~v~l~ 97 (552)
T PRK09274 20 PDQLAVAVPGGRGADGKLAYDELSFAELDARSDAIAHGLNAAGIGRGMRAVLMVTPSLE--FFALTFALFKAGAVPVLVD 97 (552)
T ss_pred CCcceEEeccCCCCccccccCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCcHH--HHHHHHHHHHcCeEEEEcC
Confidence 44566554332221 122333678888876522211 1122346788888887765433 3366788899999999886
Q ss_pred C-CCHHHHHHHHHhcCccEEEecH
Q 043601 268 K-FDLETALRAIEKYRVTHWWVVP 290 (488)
Q Consensus 268 ~-~~~~~~~~~l~~~~~t~l~~~p 290 (488)
+ ...+++...+++.++..++..+
T Consensus 98 ~~~~~~~l~~~l~~~~~~~~i~~~ 121 (552)
T PRK09274 98 PGMGIKNLKQCLAEAQPDAFIGIP 121 (552)
T ss_pred CCccHHHHHHHHHhcCCCEEEecc
Confidence 4 6778889999999999988754
No 196
>cd01449 TST_Repeat_2 Thiosulfate sulfurtransferase (TST), C-terminal, catalytic domain. TST contains 2 copies of the Rhodanese Homology Domain; this is the second repeat. Only the second repeat contains the catalytically active Cys residue.
Probab=42.48 E-value=49 Score=25.48 Aligned_cols=41 Identities=20% Similarity=0.317 Sum_probs=32.8
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHHcCCe
Q 043601 65 IKVSHGFRHLGVTKHDVVLIFAPNSIQFPICLLGVIAIGGI 105 (488)
Q Consensus 65 ~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~ 105 (488)
..+...+...|+.+++.|.++|.++.....+.+.+..+|..
T Consensus 64 ~~~~~~~~~~~~~~~~~iv~yc~~g~~s~~~~~~l~~~G~~ 104 (118)
T cd01449 64 EELRALFAALGITPDKPVIVYCGSGVTACVLLLALELLGYK 104 (118)
T ss_pred HHHHHHHHHcCCCCCCCEEEECCcHHHHHHHHHHHHHcCCC
Confidence 35566677888989999999999887777777777888863
No 197
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=42.30 E-value=2.9e+02 Score=29.48 Aligned_cols=103 Identities=12% Similarity=-0.029 Sum_probs=70.2
Q ss_pred hhhccHHHHHHhhHHh-hhhhhcCCCCcEEEEecchhhHHhHHHHHHHHhhCCceEEEcC-CCCHHHHHHHHHhcCccEE
Q 043601 209 AILTHKNFIASSLMTA-MDQELAGALDYVTLCVLPMFHVFGLSFVVYAQLQKGNCVVSMR-KFDLETALRAIEKYRVTHW 286 (488)
Q Consensus 209 v~~t~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~l~~~~~t~l 286 (488)
..+|.+.+...+.... .....+..+++++....+-..- +....++++..|+..+.+. ...++++...+++.++..+
T Consensus 105 ~~~Ty~el~~~v~~lA~~L~~lG~~~gd~Vai~~~n~~e--~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~l 182 (696)
T PLN02387 105 EWITYGQVFERVCNFASGLVALGHNKEERVAIFADTRAE--WLIALQGCFRQNITVVTIYASLGEEALCHSLNETEVTTV 182 (696)
T ss_pred EEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHH--HHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHccCCCEE
Confidence 3468887776532211 1223456788888777665432 2356678889999999775 4788999999999999999
Q ss_pred EecHHHHHHHHhcCCccCCCCCCCccEEEEcc
Q 043601 287 WVVPPIILALAKNVSLVKKFDLSSLKGIGSGA 318 (488)
Q Consensus 287 ~~~p~~~~~l~~~~~~~~~~~l~~lr~v~~~G 318 (488)
++....+..+... . ..++.++.++.-+
T Consensus 183 i~~~~~~~~l~~~-~----~~~~~l~~ii~~~ 209 (696)
T PLN02387 183 ICDSKQLKKLIDI-S----SQLETVKRVIYMD 209 (696)
T ss_pred EECHHHHHHHHHH-h----hccCCceEEEEEC
Confidence 9998888777654 1 1244566665544
No 198
>PLN00011 cysteine synthase
Probab=41.13 E-value=2.2e+02 Score=26.85 Aligned_cols=90 Identities=11% Similarity=-0.082 Sum_probs=56.5
Q ss_pred ceEEEeCCCCcceeHHHHHHHHHHHHHHHHHcC-CCCC-CEEEEEcCCCcchHHHHHHHHHcCCeEeecCCCCCHHHHHH
Q 043601 43 KSALIDADSGESLTFSQFKSIVIKVSHGFRHLG-VTKH-DVVLIFAPNSIQFPICLLGVIAIGGIATTANPVYTVSELSK 120 (488)
Q Consensus 43 ~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g-~~~g-~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~ 120 (488)
++.+-....+-+=|++. +.+..+-....+.| +.+| +.|. ....+-.-....++|..+|..+..+-|.........
T Consensus 33 ~i~~K~E~~nPtGS~K~--R~a~~~l~~a~~~g~~~~g~~~vv-~aSsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~ 109 (323)
T PLN00011 33 RIAAKLEMMEPCSSVKD--RIAYSMIKDAEDKGLITPGKSTLI-EATAGNTGIGLACIGAARGYKVILVMPSTMSLERRI 109 (323)
T ss_pred eEEEEecccCCccccch--HHHHHHHHHHHHcCCCCCCCcEEE-EeCCChHHHHHHHHHHHcCCeEEEEeCCCCCHHHHH
Confidence 55655442223333332 22333333344444 6677 5554 466677777888888999986666656555567788
Q ss_pred HHhhcCCeEEEEccc
Q 043601 121 QVKDSSPKLVVTVPE 135 (488)
Q Consensus 121 ~l~~~~~~~vi~~~~ 135 (488)
.++..++++++++..
T Consensus 110 ~i~~~GA~V~~~~~~ 124 (323)
T PLN00011 110 ILRALGAEVHLTDQS 124 (323)
T ss_pred HHHHcCCEEEEECCC
Confidence 999999999998853
No 199
>PF07210 DUF1416: Protein of unknown function (DUF1416); InterPro: IPR010814 This family consists of several hypothetical bacterial proteins of around 100 residues in length. Members of this family appear to be Actinomycete specific. The function of this family is unknown.
Probab=40.62 E-value=72 Score=23.00 Aligned_cols=42 Identities=19% Similarity=0.328 Sum_probs=28.3
Q ss_pred eeecCCCceEEEEeCCCCCCCCCCCcceEEEecCCccccceEEEccCCcEEE
Q 043601 366 TGTLVAGVEAQIVCVDTLKPLPPNQVGELWVRGPILMPGDLGYFDEHGQLFI 417 (488)
Q Consensus 366 ~g~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~~~~tGD~~~~~~~g~l~~ 417 (488)
.|.|+++..++++|. +|+- .+|+.-+ .+||.-+.-.+|.+.+
T Consensus 17 ~G~Pv~gAyVRLLD~-sgEF-----taEvvts----~~G~FRFfaapG~Wtv 58 (85)
T PF07210_consen 17 DGEPVGGAYVRLLDS-SGEF-----TAEVVTS----ATGDFRFFAAPGSWTV 58 (85)
T ss_pred CCcCCCCeEEEEEcC-CCCe-----EEEEEec----CCccEEEEeCCCceEE
Confidence 478999999999994 3322 2444332 4588877777787665
No 200
>PRK07470 acyl-CoA synthetase; Validated
Probab=40.21 E-value=2.8e+02 Score=28.05 Aligned_cols=100 Identities=21% Similarity=0.199 Sum_probs=62.7
Q ss_pred CCCceEEEeCCCC-------cceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHHcCCeEeecC-C
Q 043601 40 YGSKSALIDADSG-------ESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQFPICLLGVIAIGGIATTAN-P 111 (488)
Q Consensus 40 ~p~~~a~~~~~~~-------~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~-~ 111 (488)
.++.++++-..+| ..+|++.+...+......+. .++.++|++..+.|-+..+-...+..+..|+..+.++ .
T Consensus 161 ~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~-~~~~~~d~~l~~~p~~~~~~~~~~~~~~~g~~~~~~~~~ 239 (528)
T PRK07470 161 DHDDPCWFFFTSGTTGRPKAAVLTHGQMAFVITNHLADLM-PGTTEQDASLVVAPLSHGAGIHQLCQVARGAATVLLPSE 239 (528)
T ss_pred CCCCeEEEEeCCCCCCCCcEEEEehhhHHHHHHHHHHHhc-cCCCcccEEEEeccchhHHHHHHHHHHhcCceEEEeccc
Confidence 3456666532222 46888888543332111111 2567888888888866554444444455566554443 4
Q ss_pred CCCHHHHHHHHhhcCCeEEEEccccHHHH
Q 043601 112 VYTVSELSKQVKDSSPKLVVTVPELWERV 140 (488)
Q Consensus 112 ~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 140 (488)
..+.+.+...++..++.+++..+.....+
T Consensus 240 ~~~~~~~~~~i~~~~~t~~~~~P~~~~~l 268 (528)
T PRK07470 240 RFDPAEVWALVERHRVTNLFTVPTILKML 268 (528)
T ss_pred CcCHHHHHHHHHhcCCeEEechHHHHHHH
Confidence 56788899999999999999887776555
No 201
>PRK07529 AMP-binding domain protein; Validated
Probab=40.12 E-value=2.7e+02 Score=29.21 Aligned_cols=100 Identities=18% Similarity=0.136 Sum_probs=66.0
Q ss_pred CCCceEEEeCCCC-------cceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCc--chHHHHHHHHHcCCeEeecC
Q 043601 40 YGSKSALIDADSG-------ESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSI--QFPICLLGVIAIGGIATTAN 110 (488)
Q Consensus 40 ~p~~~a~~~~~~~-------~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~--~~~~~~lA~~~~G~~~v~l~ 110 (488)
.++.+|.+...+| -.+|++.+...+..++. ..++++++++....|-.. -.+..+++.+..|+..+..+
T Consensus 211 ~~d~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~---~~~~~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~vv~~~ 287 (632)
T PRK07529 211 GPDDVAAYFHTGGTTGMPKLAQHTHGNEVANAWLGAL---LLGLGPGDTVFCGLPLFHVNALLVTGLAPLARGAHVVLAT 287 (632)
T ss_pred CcCceEEEEECCCccCcCCEEEEcHHHHHHHHHHHHH---hcCCCCCCEEEEecCchhhhHHHHHHHHHHHCCCEEEecC
Confidence 4567776533222 46888888765544443 336788998887776432 33456788888998887765
Q ss_pred CC-CC----HHHHHHHHhhcCCeEEEEccccHHHHhc
Q 043601 111 PV-YT----VSELSKQVKDSSPKLVVTVPELWERVKD 142 (488)
Q Consensus 111 ~~-~~----~~~l~~~l~~~~~~~vi~~~~~~~~~~~ 142 (488)
+. +. ...+..++++.++.++++.+.....+..
T Consensus 288 ~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~ 324 (632)
T PRK07529 288 PQGYRGPGVIANFWKIVERYRINFLSGVPTVYAALLQ 324 (632)
T ss_pred ccccCcchHHHHHHHHHHHhCCeEEEeHHHHHHHHHh
Confidence 42 11 2466788999999999988776665543
No 202
>PLN02246 4-coumarate--CoA ligase
Probab=39.64 E-value=3.4e+02 Score=27.61 Aligned_cols=99 Identities=11% Similarity=0.032 Sum_probs=65.2
Q ss_pred CCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHh-hhhhhcCCCCcEEEEecchhhHHhHHHHHHHHhhCCceEEEcC
Q 043601 189 KQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTA-MDQELAGALDYVTLCVLPMFHVFGLSFVVYAQLQKGNCVVSMR 267 (488)
Q Consensus 189 ~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~~ 267 (488)
.++.++++... + +-.+|+..+...+.... .....+..+++++....+-.. .+...+++++..|++.+..+
T Consensus 36 ~~~~~a~~~~~---~----~~~~ty~el~~~~~~la~~L~~~g~~~gd~V~i~~~~~~--~~~~~~la~~~~G~~~v~l~ 106 (537)
T PLN02246 36 FSDRPCLIDGA---T----GRVYTYADVELLSRRVAAGLHKLGIRQGDVVMLLLPNCP--EFVLAFLGASRRGAVTTTAN 106 (537)
T ss_pred CCCCeEEEecC---C----CceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCh--HHHHHHHHHHHcCEEEecCC
Confidence 35566665321 1 23578887776532211 112345678888877765543 33356788889999999885
Q ss_pred C-CCHHHHHHHHHhcCccEEEecHHHHHHH
Q 043601 268 K-FDLETALRAIEKYRVTHWWVVPPIILAL 296 (488)
Q Consensus 268 ~-~~~~~~~~~l~~~~~t~l~~~p~~~~~l 296 (488)
+ ....++...++..++..++........+
T Consensus 107 ~~~~~~~l~~~l~~~~~~~li~~~~~~~~~ 136 (537)
T PLN02246 107 PFYTPAEIAKQAKASGAKLIITQSCYVDKL 136 (537)
T ss_pred CCCCHHHHHHHHHhcCCcEEEEccchHHHH
Confidence 4 6788999999999999998876655543
No 203
>cd01519 RHOD_HSP67B2 Member of the Rhodanese Homology Domain superfamily. This CD includes the heat shock protein 67B2 of Drosophila melanogaster and other similar proteins, many of which are uncharacterized.
Probab=39.62 E-value=65 Score=24.16 Aligned_cols=52 Identities=6% Similarity=0.085 Sum_probs=37.8
Q ss_pred ceeHHHHHHH----HHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHHcCCe
Q 043601 54 SLTFSQFKSI----VIKVSHGFRHLGVTKHDVVLIFAPNSIQFPICLLGVIAIGGI 105 (488)
Q Consensus 54 ~~Ty~el~~~----~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~ 105 (488)
.+.+.++.+. ...+...+...++.+++.|.++|.++.....+...+...|..
T Consensus 37 ~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivv~c~~g~~s~~~~~~l~~~G~~ 92 (106)
T cd01519 37 NIPLSSLPDALALSEEEFEKKYGFPKPSKDKELIFYCKAGVRSKAAAELARSLGYE 92 (106)
T ss_pred EechHHhhhhhCCCHHHHHHHhcccCCCCCCeEEEECCCcHHHHHHHHHHHHcCCc
Confidence 4556665433 235666676677888899999999988877777888888864
No 204
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family. Ectothiorhodospira halophila. This enzyme is designated 6.2.1.12 and therefore joins a number of plant enzymes linked to lignin biosynthesis and given similar names.
Probab=39.18 E-value=3.1e+02 Score=26.66 Aligned_cols=82 Identities=17% Similarity=0.217 Sum_probs=48.5
Q ss_pred cceeHHHHHHHHHHHHHHHHHcCCCC--CCEEEEEcCCCc--chHHHHHHHHHcCCeEeecCCCCCHHHHHHHHhhcCCe
Q 043601 53 ESLTFSQFKSIVIKVSHGFRHLGVTK--HDVVLIFAPNSI--QFPICLLGVIAIGGIATTANPVYTVSELSKQVKDSSPK 128 (488)
Q Consensus 53 ~~~Ty~el~~~~~~la~~L~~~g~~~--g~~V~i~~~n~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~ 128 (488)
..+|++.+...+..++..+ ++.. .+++..+.|-.. -+...++..+..|+..+... .++...+...++.. .
T Consensus 113 V~~sh~~l~~~~~~~~~~~---~~~~~~~dr~l~~~Pl~h~~g~~~~~l~~l~~G~~vv~~~-~~~~~~~l~~i~~~--t 186 (386)
T TIGR02372 113 VTHSWAALLSEAQAIAKIL---GERPPPVRRVISCVPAHHLYGFLFSCLLPSRRGLEAKQLA-AAPASGIMRHARPG--D 186 (386)
T ss_pred eEeeHHHHHHHHHHHHHHh---CcCCCCCCeEEEeCCcHHHHHHHHHHHHHHHCCCeEEecC-CCChHHHHHhhccC--C
Confidence 5789999988887777655 4433 356766666543 23344566677898877665 45554444444322 4
Q ss_pred EEEEccccHHHH
Q 043601 129 LVVTVPELWERV 140 (488)
Q Consensus 129 ~vi~~~~~~~~~ 140 (488)
+++..+.....+
T Consensus 187 ~~~~~P~~l~~l 198 (386)
T TIGR02372 187 LIVGTPFIWEQL 198 (386)
T ss_pred EEEECcHHHHHH
Confidence 555555544433
No 205
>PLN03052 acetate--CoA ligase; Provisional
Probab=38.68 E-value=3.1e+02 Score=29.46 Aligned_cols=101 Identities=13% Similarity=0.072 Sum_probs=67.9
Q ss_pred CCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHH-hhhhhhcCCCCcEEEEecchhhHHhHHHHHHHHhhCCceEEEcC
Q 043601 189 KQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMT-AMDQELAGALDYVTLCVLPMFHVFGLSFVVYAQLQKGNCVVSMR 267 (488)
Q Consensus 189 ~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~~ 267 (488)
.++.+|++....+..+.+ ...+|...|...+... ......+..++|++...+|..--. ...+++++..|+..+.+.
T Consensus 188 ~pd~~Ai~~~~e~~~~~~-~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrVai~~pn~~e~--via~LA~~~~Gav~vpi~ 264 (728)
T PLN03052 188 TDDSIAIIWRDEGSDDLP-VNRMTLSELRSQVSRVANALDALGFEKGDAIAIDMPMNVHA--VIIYLAIILAGCVVVSIA 264 (728)
T ss_pred CCCCeEEEEECCCCCCCc-eEEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHH--HHHHHHHHHcCCEEEeeC
Confidence 356777665332221222 2347888887653221 122334578899999888865433 256788889999998885
Q ss_pred -CCCHHHHHHHHHhcCccEEEecHHH
Q 043601 268 -KFDLETALRAIEKYRVTHWWVVPPI 292 (488)
Q Consensus 268 -~~~~~~~~~~l~~~~~t~l~~~p~~ 292 (488)
.+.++.+...+++.++..+++...+
T Consensus 265 p~~~~~~l~~rl~~~~~k~lit~d~~ 290 (728)
T PLN03052 265 DSFAPSEIATRLKISKAKAIFTQDVI 290 (728)
T ss_pred CCCCHHHHHHHHHhcCceEEEEcCcc
Confidence 5789999999999999999987643
No 206
>cd06448 L-Ser-dehyd Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of L- , D-serine, or L-threonine to pyruvate/ketobutyrate and ammonia.
Probab=38.40 E-value=3.1e+02 Score=25.78 Aligned_cols=91 Identities=14% Similarity=0.033 Sum_probs=57.9
Q ss_pred CceEEEeCCCCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHHcCCeEeecCCCCCHHHHHHH
Q 043601 42 SKSALIDADSGESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQFPICLLGVIAIGGIATTANPVYTVSELSKQ 121 (488)
Q Consensus 42 ~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~ 121 (488)
.++.+-....+-+-|++.- -....+.... +.|..+++.|.... .+-.-....++|...|..++.+-|..........
T Consensus 16 ~~i~~K~E~~nptGS~K~R-~a~~~l~~a~-~~g~~~~~~vv~aS-sGN~g~alA~~a~~~G~~~~iv~p~~~~~~k~~~ 92 (316)
T cd06448 16 CNVFLKLENLQPSGSFKIR-GIGHLCQKSA-KQGLNECVHVVCSS-GGNAGLAAAYAARKLGVPCTIVVPESTKPRVVEK 92 (316)
T ss_pred CeEEEEeccCCCcCChHHH-HHHHHHHHHH-HhhcccCCeEEEeC-CcHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHH
Confidence 3566655433445556642 2233333333 33434456655544 4666677778888999877777676666777889
Q ss_pred HhhcCCeEEEEccc
Q 043601 122 VKDSSPKLVVTVPE 135 (488)
Q Consensus 122 l~~~~~~~vi~~~~ 135 (488)
++..++++++++..
T Consensus 93 l~~~GA~v~~~~~~ 106 (316)
T cd06448 93 LRDEGATVVVHGKV 106 (316)
T ss_pred HHHcCCEEEEECCc
Confidence 99999999998765
No 207
>KOG1179 consensus Very long-chain acyl-CoA synthetase/fatty acid transporter [Lipid transport and metabolism]
Probab=38.19 E-value=1.3e+02 Score=30.63 Aligned_cols=84 Identities=15% Similarity=0.186 Sum_probs=62.6
Q ss_pred cceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcC--CCcchHHHHHHHHHcCCeEeecCCCCCHHHHHHHHhhcCCeEE
Q 043601 53 ESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAP--NSIQFPICLLGVIAIGGIATTANPVYTVSELSKQVKDSSPKLV 130 (488)
Q Consensus 53 ~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~--n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~v 130 (488)
..+|+......+.-+. .-.|+++.|+|-+.+| .+.-.++-+-+|+..|+++| +...+|....-.-..++++.++
T Consensus 260 Avith~r~~~~a~g~~---~~~g~~~~DvvY~~lPLYHsaa~ilGi~~~l~~GaT~V-lrkKFSAS~FW~DC~k~~~Tv~ 335 (649)
T KOG1179|consen 260 AVITHLRYLQGAAGFY---YVFGMTADDVVYTTLPLYHSAAGILGIGGCLLHGATVV-LRKKFSASNFWDDCRKYNVTVI 335 (649)
T ss_pred HHHHHHHHHHHHHHHH---HHhCCCccceEEEcchhHHHHHHHHHHHHHHhcCceEE-EecccchhhhHHHHHHhCCeee
Confidence 3577766655443333 3458999999999887 45677788888999999977 7789999999999999999877
Q ss_pred EEccccHHHH
Q 043601 131 VTVPELWERV 140 (488)
Q Consensus 131 i~~~~~~~~~ 140 (488)
-.-.+...-+
T Consensus 336 QYIGElcRYL 345 (649)
T KOG1179|consen 336 QYIGELCRYL 345 (649)
T ss_pred ehHHHHHHHH
Confidence 6554444433
No 208
>PLN02550 threonine dehydratase
Probab=37.97 E-value=4.6e+02 Score=27.28 Aligned_cols=90 Identities=18% Similarity=0.092 Sum_probs=56.6
Q ss_pred CceEEEeCCCCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHHcCCeEeecCCCCCHHHHHHH
Q 043601 42 SKSALIDADSGESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQFPICLLGVIAIGGIATTANPVYTVSELSKQ 121 (488)
Q Consensus 42 ~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~ 121 (488)
.++.+-..+.+.+-||+. .-..+++.+.-.+ ...+| . +.+..+-.-....++|.++|+.+..+-|...+......
T Consensus 124 ~~IylK~E~lqptGSFK~-RGA~n~I~~L~~e-~~~~G-V--V~aSaGNhAqgvA~aA~~lGika~IvmP~~tp~~Kv~~ 198 (591)
T PLN02550 124 VKVLLKREDLQPVFSFKL-RGAYNMMAKLPKE-QLDKG-V--ICSSAGNHAQGVALSAQRLGCDAVIAMPVTTPEIKWQS 198 (591)
T ss_pred CEEEEEEcCCCCCCcHHH-HHHHHHHHHHHHh-cCCCC-E--EEECCCHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHH
Confidence 345554443334446665 3333444433233 34555 3 33566666777788999999877666666666666778
Q ss_pred HhhcCCeEEEEcccc
Q 043601 122 VKDSSPKLVVTVPEL 136 (488)
Q Consensus 122 l~~~~~~~vi~~~~~ 136 (488)
++..+++++++....
T Consensus 199 ~r~~GAeVvl~g~~~ 213 (591)
T PLN02550 199 VERLGATVVLVGDSY 213 (591)
T ss_pred HHHcCCEEEEeCCCH
Confidence 899999999998643
No 209
>PRK06839 acyl-CoA synthetase; Validated
Probab=37.82 E-value=4.3e+02 Score=26.39 Aligned_cols=86 Identities=10% Similarity=-0.054 Sum_probs=60.7
Q ss_pred hhhccHHHHHHhhHHhhh--hhhcCCCCcEEEEecchhhHHhHHHHHHHHhhCCceEEEcCC-CCHHHHHHHHHhcCccE
Q 043601 209 AILTHKNFIASSLMTAMD--QELAGALDYVTLCVLPMFHVFGLSFVVYAQLQKGNCVVSMRK-FDLETALRAIEKYRVTH 285 (488)
Q Consensus 209 v~~t~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~l~~~~~t~ 285 (488)
..+|+..+...+...... ...+..+++.+...++-... +...+++++..|+..+.++. .++..+...+++.+++.
T Consensus 26 ~~~ty~~l~~~~~~la~~L~~~~g~~~~~~V~i~~~~~~~--~~~~~la~~~~G~~~~~~~~~~~~~~~~~~l~~~~~~~ 103 (496)
T PRK06839 26 EEMTYKQLHEYVSKVAAYLIYELNVKKGERIAILSQNSLE--YIVLLFAIAKVECIAVPLNIRLTENELIFQLKDSGTTV 103 (496)
T ss_pred ceEEHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHH--HHHHHHHHHhcCcEEEecCcccCHHHHHHHHHhcCceE
Confidence 467888887653222111 12345677877777665533 33667888999999998864 67889999999999999
Q ss_pred EEecHHHHHHH
Q 043601 286 WWVVPPIILAL 296 (488)
Q Consensus 286 l~~~p~~~~~l 296 (488)
++..+.+...+
T Consensus 104 i~~~~~~~~~~ 114 (496)
T PRK06839 104 LFVEKTFQNMA 114 (496)
T ss_pred EEEcHHHHHHH
Confidence 99988776544
No 210
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=37.18 E-value=59 Score=29.24 Aligned_cols=69 Identities=10% Similarity=0.068 Sum_probs=51.6
Q ss_pred HHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHHcCCeEeecCCCCC--HHHHHHHHh-hcCCeEEEEccccH
Q 043601 69 HGFRHLGVTKHDVVLIFAPNSIQFPICLLGVIAIGGIATTANPVYT--VSELSKQVK-DSSPKLVVTVPELW 137 (488)
Q Consensus 69 ~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~--~~~l~~~l~-~~~~~~vi~~~~~~ 137 (488)
..+.+.-..||.-=.+.||.+...++.--++.-++.+-||++|+++ .+.+..+++ ++.++.+|..+...
T Consensus 100 D~iiR~~c~PGkeKIl~cPPtysMY~v~A~iNd~eVvkvpl~pdF~lnvdai~evl~~ds~iK~~F~tSPgN 171 (375)
T KOG0633|consen 100 DLIIRCVCDPGKEKILDCPPTYSMYVVDAAINDAEVVKVPLNPDFSLNVDAIAEVLELDSKIKCIFLTSPGN 171 (375)
T ss_pred HHHHhheecCCccceeecCCcceeEEEEeecCCceEEEecCCCCccccHHHHHHHHhccccceEEEEcCCCC
Confidence 3444444567844556789999999999999999999999999886 566777775 45888888876553
No 211
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=37.17 E-value=3.5e+02 Score=27.44 Aligned_cols=98 Identities=16% Similarity=0.166 Sum_probs=65.8
Q ss_pred cCCCceEEEeC---CC----CcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcchHH---HHHHHHHcCCeEee
Q 043601 39 SYGSKSALIDA---DS----GESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQFPI---CLLGVIAIGGIATT 108 (488)
Q Consensus 39 ~~p~~~a~~~~---~~----~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~---~~lA~~~~G~~~v~ 108 (488)
..++.+|++-. .. +..+|.+.+...+.... ...++.++|++....|-...+-. ..++++..|+..+.
T Consensus 180 ~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~---~~~~~~~~d~~l~~~P~~h~~~~~~~~~~~~l~~G~~~v~ 256 (527)
T TIGR02275 180 TKSDEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSV---EICWLTQQTRYLCALPAAHNYPLSSPGALGVFYAGGCVVL 256 (527)
T ss_pred CCCCccEEEEeCCCCCCCCceeeeehHHHHHHHHHHH---hhcCCCcCCEEEECCChHhhhhhhHHHHHHHHhcCCeEEE
Confidence 34566776522 11 25688888776555433 34578889988887775543322 36778888988776
Q ss_pred cCCCCCHHHHHHHHhhcCCeEEEEccccHHHH
Q 043601 109 ANPVYTVSELSKQVKDSSPKLVVTVPELWERV 140 (488)
Q Consensus 109 l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 140 (488)
. +......+...+++.++.++...+.....+
T Consensus 257 ~-~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l 287 (527)
T TIGR02275 257 A-PDPSPTDCFPLIERHKVTVTALVPPAVALW 287 (527)
T ss_pred C-CCCCHHHHHHHHHHhCCeEEEecHHHHHHH
Confidence 4 445677788889999999999887765544
No 212
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=37.14 E-value=3.2e+02 Score=28.38 Aligned_cols=84 Identities=14% Similarity=0.135 Sum_probs=59.8
Q ss_pred cceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcc--hHHHHHHHHHcCCeEeecCCCCCHHHHHHHHhhcCCeEE
Q 043601 53 ESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQ--FPICLLGVIAIGGIATTANPVYTVSELSKQVKDSSPKLV 130 (488)
Q Consensus 53 ~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~--~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~v 130 (488)
..+|.+.+...+..+... .+++++|++....|-... +...+++.+..|+..+. .+.++...+...++..++.++
T Consensus 217 V~~sh~~l~~~~~~~~~~---~~l~~~d~~l~~~pl~h~~g~~~~~~~~l~~G~~~v~-~~~~~~~~~~~~i~~~~~t~~ 292 (600)
T PRK08279 217 AVMSHMRWLKAMGGFGGL---LRLTPDDVLYCCLPLYHNTGGTVAWSSVLAAGATLAL-RRKFSASRFWDDVRRYRATAF 292 (600)
T ss_pred EEEeHHHHHHHHHHHHHh---cCCCCCcEEEEecCchhhhhHHHHHHHHHhcCcEEEE-cCCCCHHHHHHHHHHhcceEE
Confidence 568999888776665544 578899999888776543 33345566677777665 456777888888999999988
Q ss_pred EEccccHHHH
Q 043601 131 VTVPELWERV 140 (488)
Q Consensus 131 i~~~~~~~~~ 140 (488)
.........+
T Consensus 293 ~~~p~l~~~l 302 (600)
T PRK08279 293 QYIGELCRYL 302 (600)
T ss_pred eehHHHHHHH
Confidence 8766655444
No 213
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=37.03 E-value=2e+02 Score=27.78 Aligned_cols=65 Identities=18% Similarity=0.132 Sum_probs=41.6
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHHcCCeEeecCC-----CCCHHHHHHHHhh---cCCeEEEE
Q 043601 65 IKVSHGFRHLGVTKHDVVLIFAPNSIQFPICLLGVIAIGGIATTANP-----VYTVSELSKQVKD---SSPKLVVT 132 (488)
Q Consensus 65 ~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~-----~~~~~~l~~~l~~---~~~~~vi~ 132 (488)
..+...+...++++||.|.+-.+. +....-++...|+.++.++. ..+.+.+...+.. -+.++|+.
T Consensus 55 ~al~~~l~al~~~~Gd~Viv~~~~---~~~~~~~~~~~G~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~t~~v~~ 127 (380)
T TIGR03588 55 SALHIACLALGVGPGDRVWTTPIT---FVATANCALYCGAKVDFVDIDPDTGNIDEDALEKKLAAAKGKLPKAIVP 127 (380)
T ss_pred HHHHHHHHHcCCCCCCEEEeCCcc---hHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHHhhcccCCCceEEEE
Confidence 344445555678899987775543 44555667788987766543 2467788877763 35666664
No 214
>PLN02574 4-coumarate--CoA ligase-like
Probab=36.89 E-value=4.4e+02 Score=27.01 Aligned_cols=100 Identities=20% Similarity=0.150 Sum_probs=65.9
Q ss_pred CCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHhh-hhh-hcCCCCcEEEEecchhhHHhHHHHHHHHhhCCceEEEc
Q 043601 189 KQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTAM-DQE-LAGALDYVTLCVLPMFHVFGLSFVVYAQLQKGNCVVSM 266 (488)
Q Consensus 189 ~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~ 266 (488)
.++.++++... ++. .+|...+...+..... ... .+..++|++....+-.. .+...+++++..|+..+..
T Consensus 52 ~~~~~a~~~~~---~~~----~~Ty~el~~~~~~lA~~L~~~~G~~~gd~V~i~~~n~~--~~~~~~la~~~~G~v~v~l 122 (560)
T PLN02574 52 HNGDTALIDSS---TGF----SISYSELQPLVKSMAAGLYHVMGVRQGDVVLLLLPNSV--YFPVIFLAVLSLGGIVTTM 122 (560)
T ss_pred cCCCCEEEECC---CCC----cccHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcc--hHHHHHHHHHHhCeEEeCc
Confidence 34566666422 221 3577776655222111 112 45678888888876553 2235678889999999988
Q ss_pred CC-CCHHHHHHHHHhcCccEEEecHHHHHHHH
Q 043601 267 RK-FDLETALRAIEKYRVTHWWVVPPIILALA 297 (488)
Q Consensus 267 ~~-~~~~~~~~~l~~~~~t~l~~~p~~~~~l~ 297 (488)
++ ....++...+++.++..++..+.....+.
T Consensus 123 ~p~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~ 154 (560)
T PLN02574 123 NPSSSLGEIKKRVVDCSVGLAFTSPENVEKLS 154 (560)
T ss_pred CcccCHHHHHHHHHhcCCEEEEECHHHHHHHH
Confidence 65 67889999999999999998887665543
No 215
>PLN02723 3-mercaptopyruvate sulfurtransferase
Probab=36.49 E-value=57 Score=30.85 Aligned_cols=52 Identities=15% Similarity=0.270 Sum_probs=42.5
Q ss_pred ceeHHHHHHH------HHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHHcCCe
Q 043601 54 SLTFSQFKSI------VIKVSHGFRHLGVTKHDVVLIFAPNSIQFPICLLGVIAIGGI 105 (488)
Q Consensus 54 ~~Ty~el~~~------~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~ 105 (488)
.+.|.++.+. ...+...+.++|+.+++.|.++|.++......++++..+|..
T Consensus 238 nip~~~~~~~~~~~~~~~el~~~~~~~gi~~~~~iv~yC~sG~~A~~~~~~L~~~G~~ 295 (320)
T PLN02723 238 CVPFPQMLDSSQTLLPAEELKKRFEQEGISLDSPIVASCGTGVTACILALGLHRLGKT 295 (320)
T ss_pred ccCHHHhcCCCCCCCCHHHHHHHHHhcCCCCCCCEEEECCcHHHHHHHHHHHHHcCCC
Confidence 4667766542 466777788889999999999999999999999999999975
No 216
>PRK05852 acyl-CoA synthetase; Validated
Probab=36.36 E-value=4.7e+02 Score=26.51 Aligned_cols=86 Identities=17% Similarity=0.259 Sum_probs=60.2
Q ss_pred cceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCc--chHHHHHHHHHcCCeEee-cCCCCCHHHHHHHHhhcCCeE
Q 043601 53 ESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSI--QFPICLLGVIAIGGIATT-ANPVYTVSELSKQVKDSSPKL 129 (488)
Q Consensus 53 ~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~--~~~~~~lA~~~~G~~~v~-l~~~~~~~~l~~~l~~~~~~~ 129 (488)
..+|+..+...+..+...+ +++++|++....|-.. .++..+++.+..|...+. -...++...+...+++.++..
T Consensus 194 v~~~~~~~~~~~~~~~~~~---~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~i~~~~~t~ 270 (534)
T PRK05852 194 VPWTHANIASSVRAIITGY---RLSPRDATVAVMPLYHGHGLIAALLATLASGGAVLLPARGRFSAHTFWDDIKAVGATW 270 (534)
T ss_pred EEecHHHHHHHHHHHHHHh---CCCCcceEEEecCcchhHHHHHHHHHHHhcCCeEEeCCCcCcCHHHHHHHHHHcCCcE
Confidence 4578888876666555433 6788998887776554 344567777777776553 234567778888999999998
Q ss_pred EEEccccHHHHh
Q 043601 130 VVTVPELWERVK 141 (488)
Q Consensus 130 vi~~~~~~~~~~ 141 (488)
++..+.....+.
T Consensus 271 ~~~~P~~~~~l~ 282 (534)
T PRK05852 271 YTAVPTIHQILL 282 (534)
T ss_pred EEcChHHHHHHH
Confidence 888777665543
No 217
>TIGR01138 cysM cysteine synthase B. Alternate name: O-acetylserine (thiol)-lyase
Probab=35.95 E-value=3.2e+02 Score=25.32 Aligned_cols=90 Identities=11% Similarity=0.011 Sum_probs=55.9
Q ss_pred CceEEEeCCCCcceeHHHHHHHHHHHHHHHHHcC-CCCCCEEEEEcCCCcchHHHHHHHHHcCCeEeecCCCCCHHHHHH
Q 043601 42 SKSALIDADSGESLTFSQFKSIVIKVSHGFRHLG-VTKHDVVLIFAPNSIQFPICLLGVIAIGGIATTANPVYTVSELSK 120 (488)
Q Consensus 42 ~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g-~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~ 120 (488)
.++.+-....+.+=|++. +.+..+-....+.| +.+|+.|+. +..+-.-....++|.+.|..+..+-|.........
T Consensus 23 ~~i~~K~E~~nptGS~K~--R~a~~~v~~a~~~g~~~~g~~vv~-aSsGN~g~alA~~a~~~G~~~~i~~p~~~~~~k~~ 99 (290)
T TIGR01138 23 SEVWLKLEGNNPAGSVKD--RPALSMIVEAEKRGEIKPGDVLIE-ATSGNTGIALAMIAALKGYRMKLLMPDNMSQERKA 99 (290)
T ss_pred CeEEEEEccCCCCccHHH--HHHHHHHHHHHHcCCCCCCCEEEE-ECCChHHHHHHHHHHHcCCeEEEEECCCCCHHHHH
Confidence 356665543233334443 22222223333344 467776654 56666777777888889987666666665566677
Q ss_pred HHhhcCCeEEEEcc
Q 043601 121 QVKDSSPKLVVTVP 134 (488)
Q Consensus 121 ~l~~~~~~~vi~~~ 134 (488)
.++..++++++++.
T Consensus 100 ~~~~~GA~v~~v~~ 113 (290)
T TIGR01138 100 AMRAYGAELILVTK 113 (290)
T ss_pred HHHHcCCEEEEeCC
Confidence 89999999999875
No 218
>PF00818 Ice_nucleation: Ice nucleation protein repeat; InterPro: IPR000258 Certain Gram-negative bacteria express proteins that enable them to promote nucleation of ice at relatively high temperatures (above -5C) [, ]. These proteins are localised at the outer membrane surface and can cause frost damage to many plants. The primary structure of the proteins contains a highly repetitive domain that dominates the sequence. The domain comprises a number of 48-residue repeats, which themselves contain 3 blocks of 16 residues, the first 8 of which are identical. It is thought that the repetitive domain may be responsible for aligning water molecules in the seed crystal. [.........48.residues.repeated.domain..........] / / | | \ \ AGYGSTxTagxxssli AGYGSTxTagxxsxlt AGYGSTxTaqxxsxlt [16.residues...] [16.residues...] [16.residues...] ; GO: 0009279 cell outer membrane
Probab=35.91 E-value=18 Score=16.85 Aligned_cols=9 Identities=67% Similarity=1.236 Sum_probs=6.7
Q ss_pred ccCcccccc
Q 043601 341 GYGMTETCG 349 (488)
Q Consensus 341 ~YG~tE~~~ 349 (488)
.||+|++..
T Consensus 1 GYGSTqTA~ 9 (16)
T PF00818_consen 1 GYGSTQTAG 9 (16)
T ss_pred CCCcccccC
Confidence 489998764
No 219
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=35.82 E-value=3.8e+02 Score=27.31 Aligned_cols=84 Identities=19% Similarity=0.184 Sum_probs=60.4
Q ss_pred cceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcchH---HHHHHHHHcCCeEeecCCCCCHHHHHHHHhhcCCeE
Q 043601 53 ESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQFP---ICLLGVIAIGGIATTANPVYTVSELSKQVKDSSPKL 129 (488)
Q Consensus 53 ~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~---~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ 129 (488)
..+|.+.+...+..... ..++++++++...+|-...+- ...++++..|+..+.. +..+......++++.++.+
T Consensus 200 V~~s~~~l~~~~~~~~~---~~~~~~~~~~l~~~p~~h~~~~~~~~~~~~l~~g~~~~~~-~~~~~~~~~~~l~~~~~t~ 275 (536)
T PRK10946 200 IPRTHNDYYYSVRRSVE---ICGFTPQTRYLCALPAAHNYPMSSPGALGVFLAGGTVVLA-PDPSATLCFPLIEKHQVNV 275 (536)
T ss_pred EEEehHHHHHHHHHHHH---hcCCCCCceEEEecCccccccchhhhHHHHhhcCcEEEEC-CCCCHHHHHHHHHHhCCcE
Confidence 56899988886665433 347889999888877654332 2467888899988765 4456677788899999988
Q ss_pred EEEccccHHHH
Q 043601 130 VVTVPELWERV 140 (488)
Q Consensus 130 vi~~~~~~~~~ 140 (488)
+...+.....+
T Consensus 276 ~~~~p~~~~~l 286 (536)
T PRK10946 276 TALVPPAVSLW 286 (536)
T ss_pred EEeChHHHHHH
Confidence 88776665544
No 220
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=35.72 E-value=1.8e+02 Score=28.13 Aligned_cols=62 Identities=13% Similarity=0.173 Sum_probs=38.6
Q ss_pred HHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHHcCCeEeecCCC-----CCHHHHHHHHhhcCCeEEE
Q 043601 66 KVSHGFRHLGVTKHDVVLIFAPNSIQFPICLLGVIAIGGIATTANPV-----YTVSELSKQVKDSSPKLVV 131 (488)
Q Consensus 66 ~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~vi 131 (488)
.+...|...++++||.|.+-.+ .|.....++...|+.++.++.+ .+.+.+...+.. +.++|+
T Consensus 60 al~lal~al~~~~Gd~Viv~~~---~~~~~~~~~~~~G~~~v~vd~~~~~~~~d~~~l~~~i~~-~tkav~ 126 (379)
T PRK11658 60 GMHITLMALGIGPGDEVITPSL---TWVSTLNMIVLLGATPVMVDVDRDTLMVTPEAIEAAITP-RTKAII 126 (379)
T ss_pred HHHHHHHHcCCCCCCEEEECCC---cHHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhccc-CCeEEE
Confidence 3444555567889998776433 3455556667788877766532 356777776643 456665
No 221
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=35.54 E-value=2.6e+02 Score=28.55 Aligned_cols=86 Identities=13% Similarity=0.104 Sum_probs=57.8
Q ss_pred cceeHHHHHHHHHHHHHHH-HHcCCCCCCEEEEEcCCCcch-HHHHHHHHHcCCeEeecCCCCCHHHHHHHHhhcCCeEE
Q 043601 53 ESLTFSQFKSIVIKVSHGF-RHLGVTKHDVVLIFAPNSIQF-PICLLGVIAIGGIATTANPVYTVSELSKQVKDSSPKLV 130 (488)
Q Consensus 53 ~~~Ty~el~~~~~~la~~L-~~~g~~~g~~V~i~~~n~~~~-~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~v 130 (488)
..+|...+.... .+..+ ...++.++|++..+.|-...+ ....++.+..|+..+...+..+.+.+..+++..++..+
T Consensus 194 v~~s~~~~~~~~--~~~~~~~~~~~~~~d~~l~~~p~~h~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~vt~~ 271 (539)
T PRK07008 194 ALYSHRSTVLHA--YGAALPDAMGLSARDAVLPVVPMFHVNAWGLPYSAPLTGAKLVLPGPDLDGKSLYELIEAERVTFS 271 (539)
T ss_pred EEEecHHHHHHH--HHhhcccccCCCCCceEEecCchHHhhhHHHHHHHHhcCceEEEecCCcCHHHHHHHHHHcCCEEE
Confidence 457776664322 22222 235778899888776643222 23346778899888877777888999999999999998
Q ss_pred EEccccHHHH
Q 043601 131 VTVPELWERV 140 (488)
Q Consensus 131 i~~~~~~~~~ 140 (488)
...+.....+
T Consensus 272 ~~~P~~~~~l 281 (539)
T PRK07008 272 AGVPTVWLGL 281 (539)
T ss_pred EechHHHHHH
Confidence 8776665544
No 222
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=35.18 E-value=3.7e+02 Score=27.57 Aligned_cols=83 Identities=12% Similarity=0.032 Sum_probs=58.8
Q ss_pred hhccHHHHHHhhHHhhhh--hhcCCCCcEEEEecchhhHHhHHHHHHHHhhCCceEEEcCC-CCHHHHHHHHHhcCccEE
Q 043601 210 ILTHKNFIASSLMTAMDQ--ELAGALDYVTLCVLPMFHVFGLSFVVYAQLQKGNCVVSMRK-FDLETALRAIEKYRVTHW 286 (488)
Q Consensus 210 ~~t~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~l~~~~~t~l 286 (488)
.+|...+...+....... ..+..+++++...++...-+ ...+++++..|+..+..++ ...+++...+++.++..+
T Consensus 49 ~~Ty~el~~~~~~la~~L~~~~gi~~gd~Vai~~~n~~~~--~~~~la~~~~Ga~~v~l~~~~~~~~l~~~l~~~~~~~i 126 (562)
T PRK05677 49 TLTYGELYKLSGAFAAWLQQHTDLKPGDRIAVQLPNVLQY--PVAVFGAMRAGLIVVNTNPLYTAREMEHQFNDSGAKAL 126 (562)
T ss_pred eeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHH--HHHHHHHHHcCeEEeecCCCCCHHHHHHHHhccCceEE
Confidence 578888876633222111 13567888888887665433 2567888999999998864 678899999999999999
Q ss_pred EecHHHHH
Q 043601 287 WVVPPIIL 294 (488)
Q Consensus 287 ~~~p~~~~ 294 (488)
+.......
T Consensus 127 i~~~~~~~ 134 (562)
T PRK05677 127 VCLANMAH 134 (562)
T ss_pred EEecchhh
Confidence 88665443
No 223
>PF09269 DUF1967: Domain of unknown function (DUF1967); InterPro: IPR015349 The Obg family comprises a group of ancient P-loop small G proteins (GTPases) belonging to the TRAFAC (for translation factors) class and can be subdivided into several distinct protein subfamilies []. OBG GTPases have been found in both prokaryotes and eukaryotes []. The structure of the OBG GTPase from Thermus thermophilus has been determined []. This entry represents a C-terminal domain found in certain OBG GTPases. This domain contains a four-stranded beta sheet and three alpha helices flanked by an additional beta strand. It is predominantly found in the bacterial GTP-binding protein Obg, and is functionally uncharacterised. ; GO: 0000166 nucleotide binding; PDB: 1UDX_A.
Probab=34.81 E-value=42 Score=23.32 Aligned_cols=29 Identities=28% Similarity=0.224 Sum_probs=16.7
Q ss_pred eHHHHHHHHHHHHHHHHHcCCCCCCEEEE
Q 043601 56 TFSQFKSIVIKVSHGFRHLGVTKHDVVLI 84 (488)
Q Consensus 56 Ty~el~~~~~~la~~L~~~g~~~g~~V~i 84 (488)
.|=+-.-+...+-..|+++|+++||.|-|
T Consensus 34 ~rf~~~L~~~Gv~~~L~~~G~~~GD~V~I 62 (69)
T PF09269_consen 34 RRFQRKLKKMGVEKALRKAGAKEGDTVRI 62 (69)
T ss_dssp HHHHHHHHHTTHHHHHHTTT--TT-EEEE
T ss_pred HHHHHHHHHCCHHHHHHHcCCCCCCEEEE
Confidence 33333334455566778889999999977
No 224
>PF03808 Glyco_tran_WecB: Glycosyl transferase WecB/TagA/CpsF family; InterPro: IPR004629 The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in Enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.; GO: 0009058 biosynthetic process
Probab=34.65 E-value=62 Score=27.28 Aligned_cols=77 Identities=8% Similarity=0.015 Sum_probs=44.7
Q ss_pred CCceEEEcCCCCHHHHHHHHHhcCccEEEecHHHHHHHHhcCCccCCCCCCCccEEEEccCC-CcHHHHHHHHhhCCCCe
Q 043601 259 KGNCVVSMRKFDLETALRAIEKYRVTHWWVVPPIILALAKNVSLVKKFDLSSLKGIGSGAAP-LRKELVEECSKNLPTVT 337 (488)
Q Consensus 259 ~G~~~~~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~~l~~lr~v~~~G~~-l~~~~~~~~~~~~~~~~ 337 (488)
..+.++++++.....+.+.+ ..++..-+.-+.++..+++. .. ....+..+.||.+ .-..+.+.+.+.+|++.
T Consensus 4 ~~adlv~~DG~~i~~~~~~~-g~~~~~rv~g~dl~~~l~~~-~~-----~~~~~ifllG~~~~~~~~~~~~l~~~yP~l~ 76 (172)
T PF03808_consen 4 NSADLVLPDGMPIVWAARLL-GRPLPERVTGSDLFPDLLRR-AE-----QRGKRIFLLGGSEEVLEKAAANLRRRYPGLR 76 (172)
T ss_pred HhCCEEecCCHHHHHHHHHc-CCCCCcccCHHHHHHHHHHH-HH-----HcCCeEEEEeCCHHHHHHHHHHHHHHCCCeE
Confidence 35566666664455555555 44443445556667777665 22 2235777777744 23345567888888777
Q ss_pred EEecc
Q 043601 338 VFQGY 342 (488)
Q Consensus 338 i~~~Y 342 (488)
+.-.|
T Consensus 77 ivg~~ 81 (172)
T PF03808_consen 77 IVGYH 81 (172)
T ss_pred EEEec
Confidence 76443
No 225
>PLN03102 acyl-activating enzyme; Provisional
Probab=34.44 E-value=2.7e+02 Score=28.81 Aligned_cols=84 Identities=11% Similarity=0.003 Sum_probs=59.4
Q ss_pred hhccHHHHHHhhHHh-hhhhhcCCCCcEEEEecchhhHHhHHHHHHHHhhCCceEEEcCC-CCHHHHHHHHHhcCccEEE
Q 043601 210 ILTHKNFIASSLMTA-MDQELAGALDYVTLCVLPMFHVFGLSFVVYAQLQKGNCVVSMRK-FDLETALRAIEKYRVTHWW 287 (488)
Q Consensus 210 ~~t~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~l~~~~~t~l~ 287 (488)
.+|...+...+.... .....+..+++++...+|-.- .+...+++++..|+.++.+++ .+.+.+...++..+++.++
T Consensus 39 ~~Ty~eL~~~~~~~a~~L~~~Gl~~gd~Vai~~~n~~--e~~~~~la~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~ii 116 (579)
T PLN03102 39 RFTWPQTYDRCCRLAASLISLNITKNDVVSVLAPNTP--AMYEMHFAVPMAGAVLNPINTRLDATSIAAILRHAKPKILF 116 (579)
T ss_pred EEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcH--HHHHHHHHHHhcCcEEeeccccCCHHHHHHHHhccCCeEEE
Confidence 477787776522211 112235678888888877543 333567888999999988854 6889999999999999999
Q ss_pred ecHHHHHH
Q 043601 288 VVPPIILA 295 (488)
Q Consensus 288 ~~p~~~~~ 295 (488)
+.+.+...
T Consensus 117 ~~~~~~~~ 124 (579)
T PLN03102 117 VDRSFEPL 124 (579)
T ss_pred EChhhHHH
Confidence 87765543
No 226
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=34.00 E-value=2.1e+02 Score=28.48 Aligned_cols=55 Identities=20% Similarity=0.238 Sum_probs=36.1
Q ss_pred CCCCCCEEEEEcCCCcchHHHHHHHHHcCCeEeecCCC-----CCHHHHHHHHhhcCCeEEEEc
Q 043601 75 GVTKHDVVLIFAPNSIQFPICLLGVIAIGGIATTANPV-----YTVSELSKQVKDSSPKLVVTV 133 (488)
Q Consensus 75 g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~vi~~ 133 (488)
++++||.|.+-.+ .|.....++...|+.+++++.+ .+.+.+...+.. +.++|++.
T Consensus 107 ~~~pGd~VIv~~~---t~~a~~~~v~~~G~~pv~vdvd~~~~~id~~~le~~i~~-~tkaVi~~ 166 (438)
T PRK15407 107 ALKPGDEVITVAA---GFPTTVNPIIQNGLVPVFVDVELPTYNIDASLLEAAVSP-KTKAIMIA 166 (438)
T ss_pred CCCCCCEEEECCC---CcHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHHcCc-CCeEEEEe
Confidence 7889998876543 3455566777789887776543 356667766643 56666654
No 227
>PRK10717 cysteine synthase A; Provisional
Probab=33.99 E-value=2.9e+02 Score=26.13 Aligned_cols=91 Identities=9% Similarity=-0.041 Sum_probs=55.9
Q ss_pred CceEEEeCCCCcceeHHHHHHHHHHHHHHHHHcC-CCCCCEEEEEcCCCcchHHHHHHHHHcCCeEeecCCCCCHHHHHH
Q 043601 42 SKSALIDADSGESLTFSQFKSIVIKVSHGFRHLG-VTKHDVVLIFAPNSIQFPICLLGVIAIGGIATTANPVYTVSELSK 120 (488)
Q Consensus 42 ~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g-~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~ 120 (488)
-++.+-....+.+-|++. +-....+... .+.| +++|+.|.. +..+-.-....++|...|..+..+-|....+....
T Consensus 28 ~~i~~K~E~~nptGS~K~-Rga~~~v~~a-~~~g~~~~g~~vv~-aSsGN~g~alA~~a~~~G~~~~vv~p~~~~~~k~~ 104 (330)
T PRK10717 28 CEILGKAEFLNPGGSVKD-RAALNIIWDA-EKRGLLKPGGTIVE-GTAGNTGIGLALVAAARGYKTVIVMPETQSQEKKD 104 (330)
T ss_pred CeEEEEeeccCCCCCchH-HHHHHHHHHH-HHcCCCCCCCEEEE-eCCcHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHH
Confidence 356665443233444443 1122233333 3344 466766544 66666777777888889986666556555666788
Q ss_pred HHhhcCCeEEEEccc
Q 043601 121 QVKDSSPKLVVTVPE 135 (488)
Q Consensus 121 ~l~~~~~~~vi~~~~ 135 (488)
.++..++++++++..
T Consensus 105 ~~~~~GA~V~~~~~~ 119 (330)
T PRK10717 105 LLRALGAELVLVPAA 119 (330)
T ss_pred HHHHcCCEEEEeCCc
Confidence 999999999998753
No 228
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=33.50 E-value=3.7e+02 Score=30.61 Aligned_cols=99 Identities=16% Similarity=0.128 Sum_probs=68.3
Q ss_pred cCCCceEEEeCCC-------CcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCC--cchHHHHHHHHHcCCeEeec
Q 043601 39 SYGSKSALIDADS-------GESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNS--IQFPICLLGVIAIGGIATTA 109 (488)
Q Consensus 39 ~~p~~~a~~~~~~-------~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~--~~~~~~~lA~~~~G~~~v~l 109 (488)
..++.++.+-..+ +..+|.+.+...+..... ..++.++|++...+|-. ..+....++.+..|+..+..
T Consensus 779 ~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~---~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~g~~~v~~ 855 (1146)
T PRK08633 779 FKPDDTATIIFSSGSEGEPKGVMLSHHNILSNIEQISD---VFNLRNDDVILSSLPFFHSFGLTVTLWLPLLEGIKVVYH 855 (1146)
T ss_pred CCCCCEEEEEECCCCCCCCceEEechHHHHHHHHHHHH---hcCCCCCCEEEEcCcHHHHHhHHHHHHHHHHCCCEEEEe
Confidence 3457777653221 256888888776655443 34678889887766642 22334467778889888877
Q ss_pred CCCCCHHHHHHHHhhcCCeEEEEccccHHHH
Q 043601 110 NPVYTVSELSKQVKDSSPKLVVTVPELWERV 140 (488)
Q Consensus 110 ~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 140 (488)
+...+.+.+.+.+++.++.++...+.....+
T Consensus 856 ~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l 886 (1146)
T PRK08633 856 PDPTDALGIAKLVAKHRATILLGTPTFLRLY 886 (1146)
T ss_pred CCCCCHHHHHHHHHHcCCeEEEecHHHHHHH
Confidence 6667888999999999999999887766544
No 229
>PRK07787 acyl-CoA synthetase; Validated
Probab=33.15 E-value=5e+02 Score=25.80 Aligned_cols=83 Identities=18% Similarity=0.223 Sum_probs=58.2
Q ss_pred cceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCC--cchHHHHHHHHHcCCeEeecCCCCCHHHHHHHHhhcCCeEE
Q 043601 53 ESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNS--IQFPICLLGVIAIGGIATTANPVYTVSELSKQVKDSSPKLV 130 (488)
Q Consensus 53 ~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~--~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~v 130 (488)
..+|++.+...+..+... .++.+++++....|-. .-+...+++.+..|+..+..+ ..+...+...++ .++..+
T Consensus 146 v~~t~~~l~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~-~~~t~~ 220 (471)
T PRK07787 146 VVLSRRAIAADLDALAEA---WQWTADDVLVHGLPLFHVHGLVLGVLGPLRIGNRFVHTG-RPTPEAYAQALS-EGGTLY 220 (471)
T ss_pred EEEeHHHHHHHHHHHHHh---cCCCccceeEeccCCeeechhHHHHHHHHhcCCEEEecC-CCCHHHHHHHHh-hCceEE
Confidence 467888887766555543 4677888776655532 234566888899999888765 467788888888 888888
Q ss_pred EEccccHHHH
Q 043601 131 VTVPELWERV 140 (488)
Q Consensus 131 i~~~~~~~~~ 140 (488)
...+.....+
T Consensus 221 ~~~P~~~~~l 230 (471)
T PRK07787 221 FGVPTVWSRI 230 (471)
T ss_pred EcchHHHHHH
Confidence 7766655444
No 230
>TIGR03595 Obg_CgtA_exten Obg family GTPase CgtA, C-terminal extension. CgtA (see model TIGR02729) is a broadly conserved member of the obg family of GTPases associated with ribosome maturation. This model represents a unique C-terminal domain found in some but not all sequences of CgtA. This region is preceded, and may be followed, by a region of low-complexity sequence.
Probab=33.08 E-value=53 Score=22.79 Aligned_cols=19 Identities=32% Similarity=0.373 Sum_probs=14.7
Q ss_pred HHHHHHHcCCCCCCEEEEE
Q 043601 67 VSHGFRHLGVTKHDVVLIF 85 (488)
Q Consensus 67 la~~L~~~g~~~g~~V~i~ 85 (488)
+-..|+++|+++||.|-|.
T Consensus 45 v~~~L~~~G~~~GD~V~Ig 63 (69)
T TIGR03595 45 VEDALRKAGAKDGDTVRIG 63 (69)
T ss_pred HHHHHHHcCCCCCCEEEEc
Confidence 4455677899999999874
No 231
>cd01561 CBS_like CBS_like: This subgroup includes Cystathionine beta-synthase (CBS) and Cysteine synthase. CBS is a unique heme-containing enzyme that catalyzes a pyridoxal 5'-phosphate (PLP)-dependent condensation of serine and homocysteine to give cystathionine. Deficiency of CBS leads to homocystinuria, an inherited disease of sulfur metabolism characterized by increased levels of the toxic metabolite homocysteine. Cysteine synthase on the other hand catalyzes the last step of cysteine biosynthesis. This subgroup also includes an O-Phosphoserine sulfhydrylase found in hyperthermophilic archaea which produces L-cysteine from sulfide and the more thermostable O-phospho-L-serine.
Probab=32.62 E-value=3.5e+02 Score=24.99 Aligned_cols=92 Identities=8% Similarity=-0.083 Sum_probs=56.5
Q ss_pred CceEEEeCCCCcceeHHHHHHHHHHHHHHHHHcCC-CCCCEEEEEcCCCcchHHHHHHHHHcCCeEeecCCCCCHHHHHH
Q 043601 42 SKSALIDADSGESLTFSQFKSIVIKVSHGFRHLGV-TKHDVVLIFAPNSIQFPICLLGVIAIGGIATTANPVYTVSELSK 120 (488)
Q Consensus 42 ~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~-~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~ 120 (488)
.++.+-....+.+-+++.-- ....+. .+.+.|. ++|+.|+. ...+-.-....++|.+.|..++.+-|.........
T Consensus 17 ~~i~~K~E~~~ptgS~K~R~-a~~~l~-~a~~~g~~~~~~~vv~-~SsGN~g~alA~~a~~~G~~~~i~vp~~~~~~k~~ 93 (291)
T cd01561 17 AEIYAKLEFFNPGGSVKDRI-ALYMIE-DAEKRGLLKPGTTIIE-PTSGNTGIGLAMVAAAKGYRFIIVMPETMSEEKRK 93 (291)
T ss_pred CeEEEEecccCCCCcchHHH-HHHHHH-HHHHcCCCCCCCEEEE-eCCChHHHHHHHHHHHcCCeEEEEECCCCCHHHHH
Confidence 35666554323334444322 122233 3344453 35666544 66677778888889999986666666555566678
Q ss_pred HHhhcCCeEEEEcccc
Q 043601 121 QVKDSSPKLVVTVPEL 136 (488)
Q Consensus 121 ~l~~~~~~~vi~~~~~ 136 (488)
.++..++++++++...
T Consensus 94 ~~~~~Ga~v~~~~~~~ 109 (291)
T cd01561 94 LLRALGAEVILTPEAE 109 (291)
T ss_pred HHHHcCCEEEEeCCCC
Confidence 8899999999988654
No 232
>PRK09162 hypoxanthine-guanine phosphoribosyltransferase; Provisional
Probab=32.39 E-value=1.3e+02 Score=25.63 Aligned_cols=47 Identities=2% Similarity=-0.052 Sum_probs=33.3
Q ss_pred CcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHH
Q 043601 52 GESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQFPICLLGV 99 (488)
Q Consensus 52 ~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~ 99 (488)
...+||+|+.+.+.++|..+.+. +.....+.+...++-..++..+|-
T Consensus 14 ~~~~s~~~i~~~i~~la~~i~~~-~~~~~~viV~i~~gg~~~A~~La~ 60 (181)
T PRK09162 14 DCLVSAAEVEAAIDRMADEITAD-LADENPLVLCVMGGGLVFTGQLLP 60 (181)
T ss_pred cEeecHHHHHHHHHHHHHHHHHH-cCCCCeEEEEECCCcHHHHHHHHH
Confidence 46789999999999999999875 222233555556666666666653
No 233
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=32.07 E-value=5.2e+02 Score=25.82 Aligned_cols=83 Identities=14% Similarity=0.153 Sum_probs=59.2
Q ss_pred cceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcc-hHHHHHHHHHcCCeEeecCCC--CCHHHHHHHHhhcCCeE
Q 043601 53 ESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQ-FPICLLGVIAIGGIATTANPV--YTVSELSKQVKDSSPKL 129 (488)
Q Consensus 53 ~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~-~~~~~lA~~~~G~~~v~l~~~--~~~~~l~~~l~~~~~~~ 129 (488)
..+|++.+...+..+.. ..++..++++....|.... .+..+++++..|+..+..++. .+...+...+...++..
T Consensus 159 v~~s~~~~~~~~~~~~~---~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 235 (502)
T TIGR01734 159 VQISHDNLVSFTNWMLA---DFPLSEGKQFLNQAPFSFDLSVMDLYPCLASGGTLHCLDKDITNNFKLLFEELPKTGLNV 235 (502)
T ss_pred EEEecHHHHHHHHHHHH---hCCCCCCceEEeecCceechhHHHHHHHHHCCCEEEEcCHHHhcCHHHHHHHHHHcCCeE
Confidence 57889888766554433 3577888887776665532 345677889999998887654 35677888888999988
Q ss_pred EEEccccHH
Q 043601 130 VVTVPELWE 138 (488)
Q Consensus 130 vi~~~~~~~ 138 (488)
+...+....
T Consensus 236 ~~~~p~~~~ 244 (502)
T TIGR01734 236 WVSTPSFVD 244 (502)
T ss_pred EEEChhHHH
Confidence 887766544
No 234
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=31.91 E-value=3e+02 Score=28.13 Aligned_cols=97 Identities=12% Similarity=0.039 Sum_probs=65.3
Q ss_pred CCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHhhh--hhhcCCCCcEEEEecchhhHHhHHHHHHHHhhCCceEEEc
Q 043601 189 KQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTAMD--QELAGALDYVTLCVLPMFHVFGLSFVVYAQLQKGNCVVSM 266 (488)
Q Consensus 189 ~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~ 266 (488)
.++.++++.. | -.+|+..+...+...... ...+..+++++...++-..- +...+++++..|+..+..
T Consensus 38 ~~~~~a~~~~--~-------~~~Ty~el~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~--~~~~~lA~~~~G~~~v~l 106 (560)
T PRK08751 38 FADRPAYHSF--G-------KTITYREADQLVEQFAAYLLGELQLKKGDRVALMMPNCLQ--YPIATFGVLRAGLTVVNV 106 (560)
T ss_pred CCCCceEEEC--C-------ceeeHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHH--HHHHHHHHHHhCeEEecc
Confidence 3556676542 2 247888777653332221 23456778888777665533 235678889999999987
Q ss_pred CC-CCHHHHHHHHHhcCccEEEecHHHHHHH
Q 043601 267 RK-FDLETALRAIEKYRVTHWWVVPPIILAL 296 (488)
Q Consensus 267 ~~-~~~~~~~~~l~~~~~t~l~~~p~~~~~l 296 (488)
++ +...++...+++.+++.++....+...+
T Consensus 107 ~p~~~~~~~~~~l~~~~~~~vi~~~~~~~~~ 137 (560)
T PRK08751 107 NPLYTPRELKHQLIDSGASVLVVIDNFGTTV 137 (560)
T ss_pred CccCCHHHHHHHHHhcCCeEEEEcchhHHHH
Confidence 54 6789999999999999999877665443
No 235
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=31.78 E-value=4.3e+02 Score=27.67 Aligned_cols=98 Identities=12% Similarity=0.031 Sum_probs=65.5
Q ss_pred CCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHh-hhhhhcCCCCcEEEEecchhhHHhHHHHHHHHhhCCceEEEcC
Q 043601 189 KQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTA-MDQELAGALDYVTLCVLPMFHVFGLSFVVYAQLQKGNCVVSMR 267 (488)
Q Consensus 189 ~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~~ 267 (488)
.++.+|++.... .. .....+|.+.+...+.... .....+..+++++...++-.--+ ...+++++..|+..+.+.
T Consensus 80 ~p~~~Al~~~~~-~~--~~~~~lTy~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~--~~~~lA~~~~Gav~v~l~ 154 (637)
T PRK00174 80 RGDKVAIIWEGD-DP--GDSRKITYRELHREVCRFANALKSLGVKKGDRVAIYMPMIPEA--AVAMLACARIGAVHSVVF 154 (637)
T ss_pred CCCCeEEEEECC-CC--CceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH--HHHHHHHHHcCCEEEecC
Confidence 366777764221 10 1234578888877632211 12223567888888887665433 256788899999998885
Q ss_pred -CCCHHHHHHHHHhcCccEEEecHH
Q 043601 268 -KFDLETALRAIEKYRVTHWWVVPP 291 (488)
Q Consensus 268 -~~~~~~~~~~l~~~~~t~l~~~p~ 291 (488)
.+.++.+...+++.++..+++...
T Consensus 155 ~~~~~~~l~~~l~~~~~~~li~~~~ 179 (637)
T PRK00174 155 GGFSAEALADRIIDAGAKLVITADE 179 (637)
T ss_pred CCCCHHHHHHHHHhcCCcEEEEcCc
Confidence 478899999999999999987653
No 236
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=31.72 E-value=2.8e+02 Score=28.39 Aligned_cols=83 Identities=10% Similarity=-0.082 Sum_probs=60.0
Q ss_pred hhhccHHHHHHhhHHh--hhhhhcCCCCcEEEEecchhhHHhHHHHHHHHhhCCceEEEc-CCCCHHHHHHHHHhcCccE
Q 043601 209 AILTHKNFIASSLMTA--MDQELAGALDYVTLCVLPMFHVFGLSFVVYAQLQKGNCVVSM-RKFDLETALRAIEKYRVTH 285 (488)
Q Consensus 209 v~~t~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~-~~~~~~~~~~~l~~~~~t~ 285 (488)
-.+|.+.|...+.... +...... ++|++...+|+.--.. ..++++...|+....+ +.+.++.+...+.+.++..
T Consensus 39 ~~~Ty~~L~~~v~r~A~~L~~~~gv-kGDrV~iymp~~pe~~--~a~LA~~riGAI~~~vf~~f~~~al~~Ri~d~~~k~ 115 (528)
T COG0365 39 RELTYGDLRREVARLANALKDLGGV-KGDRVAIYMPNSPEAV--IALLATARIGAIPAVVSPGLSAEAVADRIADLGPKV 115 (528)
T ss_pred eEEEHHHHHHHHHHHHHHHHHhCCC-CCCEEEEEcCCCHHHH--HHHHHHHHcCCEEeecccCCCHHHHHHHHHccCCCE
Confidence 4677777776632221 1122334 8999999999876543 5677888888877766 5689999999999999999
Q ss_pred EEecHHHHH
Q 043601 286 WWVVPPIIL 294 (488)
Q Consensus 286 l~~~p~~~~ 294 (488)
+++....+.
T Consensus 116 vit~d~~~~ 124 (528)
T COG0365 116 LIADDGTFR 124 (528)
T ss_pred EEEeccccc
Confidence 997765544
No 237
>KOG1138 consensus Predicted cleavage and polyadenylation specificity factor (CPSF subunit) [RNA processing and modification]
Probab=31.54 E-value=76 Score=31.45 Aligned_cols=74 Identities=18% Similarity=0.244 Sum_probs=50.6
Q ss_pred HHHHHHcCCCCCCEEEEEcC-CCcchHHHHHHHHHcCCeEeecCCCCCHHHHHHHHhhcCCeEEEEccccHHHHh
Q 043601 68 SHGFRHLGVTKHDVVLIFAP-NSIQFPICLLGVIAIGGIATTANPVYTVSELSKQVKDSSPKLVVTVPELWERVK 141 (488)
Q Consensus 68 a~~L~~~g~~~g~~V~i~~~-n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~ 141 (488)
++.+.-.|..+.-.|...-| -+...+.+=|-=+..-++++|++..+..+.+..+++..+|+++++.+++.+...
T Consensus 407 ~h~~e~~g~sp~NsvI~tdpD~~~~~vl~PfrpLamK~i~cpidtrlnfqql~kLlkelqPk~vlcpeaytqp~~ 481 (653)
T KOG1138|consen 407 VHFLECWGLSPKNSVIFTDPDFSYLLVLAPFRPLAMKIIYCPIDTRLNFQQLPKLLKELQPKIVLCPEAYTQPIP 481 (653)
T ss_pred HHHHHHhcCCCCCceEEeCCCCchhhhhcCCccccceeEeccccccccHHHHHHHHHHhCCCEEEChhhhcCCCC
Confidence 34444445554444444333 344444444455566788999999999999999999999999999887765443
No 238
>PRK05857 acyl-CoA synthetase; Validated
Probab=31.41 E-value=4e+02 Score=27.13 Aligned_cols=95 Identities=14% Similarity=-0.015 Sum_probs=63.6
Q ss_pred CCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHhh-hhhhcCCCCcEEEEecchhhHHhHHHHHHHHhhCCceEEEcC
Q 043601 189 KQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTAM-DQELAGALDYVTLCVLPMFHVFGLSFVVYAQLQKGNCVVSMR 267 (488)
Q Consensus 189 ~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~~ 267 (488)
.++.++++... | ...+|...+...+..... -...+..+++++....+....+ ...+++++..|+..+.++
T Consensus 27 ~p~~~a~~~~~-~------~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~e~--~~~~lA~~~~G~v~v~l~ 97 (540)
T PRK05857 27 QPEAIALRRCD-G------TSALRYRELVAEVGGLAADLRAQSVSRGSRVLVISDNGPET--YLSVLACAKLGAIAVMAD 97 (540)
T ss_pred CCCcEEEeecC-C------CceeeHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcCCCHHH--HHHHHHHHHcCeEEEecC
Confidence 45666665432 2 134788888765322111 1123466788887777655433 356788899999999886
Q ss_pred C-CCHHHHHHHHHhcCccEEEecHHH
Q 043601 268 K-FDLETALRAIEKYRVTHWWVVPPI 292 (488)
Q Consensus 268 ~-~~~~~~~~~l~~~~~t~l~~~p~~ 292 (488)
. ...+.+...++..++..++..+..
T Consensus 98 ~~~~~~~l~~~~~~~~~~~ii~~~~~ 123 (540)
T PRK05857 98 GNLPIAAIERFCQITDPAAALVAPGS 123 (540)
T ss_pred ccCCHHHHHHHHHhcCCceEEEeccc
Confidence 4 678889999999999998887654
No 239
>cd07050 BMC_EutL_repeat2 ethanolamine utilization protein S (EutS), Bacterial Micro-Compartment (BMC) domain repeat 2. EutL proteins are homologs of the carboxysome shell protein. They are encoded within the eut operon and might be required for the formation of the outer shell of the bacterial eut polyhedral organelles which are involved in the cobalamin-dependent degradation of ethanolamine. Although it has been suggested that EutL might form hexamers and further assemble into the flat facets of the polyhedral outer shell of eut organelles at present no experimental evidence directly supports this view. EutL proteins contain two tandem BMC domains. This CD includes domain 2 (the second BMC domain of EutL).
Probab=30.99 E-value=85 Score=22.39 Aligned_cols=40 Identities=5% Similarity=0.110 Sum_probs=33.4
Q ss_pred HHHHHH-cCCCCCCEEEEEcCCCcchHHHHHHHHHcCCeEe
Q 043601 68 SHGFRH-LGVTKHDVVLIFAPNSIQFPICLLGVIAIGGIAT 107 (488)
Q Consensus 68 a~~L~~-~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v 107 (488)
..+|.+ .|+++|+.++.+.....|.+..+=|++++.-+-+
T Consensus 3 GsYls~~agi~eGe~lAYLIapPlEa~y~lDaALKAAdV~~ 43 (87)
T cd07050 3 GSYLSKTAGIAEGEALAYLIAPPLEAMYGLDAALKAADVEL 43 (87)
T ss_pred chhhHHhcCCCCCCeeeeeecCcHHHHHHHHHHHHhhceee
Confidence 456765 5999999999999999999999999999875433
No 240
>PRK07476 eutB threonine dehydratase; Provisional
Probab=30.96 E-value=3e+02 Score=25.98 Aligned_cols=53 Identities=9% Similarity=-0.013 Sum_probs=39.4
Q ss_pred EEcCCCcchHHHHHHHHHcCCeEeecCCCCCHHHHHHHHhhcCCeEEEEcccc
Q 043601 84 IFAPNSIQFPICLLGVIAIGGIATTANPVYTVSELSKQVKDSSPKLVVTVPEL 136 (488)
Q Consensus 84 i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~ 136 (488)
+....+-.-....++|...|..++.+-|...+......++..++++++++...
T Consensus 71 v~aSsGN~g~alA~~a~~~G~~~~i~vp~~~~~~k~~~~~~~GA~V~~~~~~~ 123 (322)
T PRK07476 71 VTASTGNHGRALAYAARALGIRATICMSRLVPANKVDAIRALGAEVRIVGRSQ 123 (322)
T ss_pred EEECCChHHHHHHHHHHHhCCCEEEEeCCCCCHHHHHHHHHcCCEEEEECCCH
Confidence 33455666777788888999876666566655667788899999999998643
No 241
>KOG1250 consensus Threonine/serine dehydratases [Amino acid transport and metabolism]
Probab=30.90 E-value=1.8e+02 Score=28.21 Aligned_cols=53 Identities=13% Similarity=0.093 Sum_probs=44.6
Q ss_pred EEcCCCcchHHHHHHHHHcCCeEeecCCCCCHHHHHHHHhhcCCeEEEEcccc
Q 043601 84 IFAPNSIQFPICLLGVIAIGGIATTANPVYTVSELSKQVKDSSPKLVVTVPEL 136 (488)
Q Consensus 84 i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~ 136 (488)
+++.-+-....+.+|+.++|+.+..+-|...+....+.++..++.+++.....
T Consensus 118 iasSaGNha~a~Ayaa~~LgipaTIVmP~~tp~~kiq~~~nlGA~Vil~G~~~ 170 (457)
T KOG1250|consen 118 IASSAGNHAQAAAYAARKLGIPATIVMPVATPLMKIQRCRNLGATVILSGEDW 170 (457)
T ss_pred EEecCccHHHHHHHHHHhcCCceEEEecCCChHHHHHHHhccCCEEEEecccH
Confidence 34455566788899999999998888899999999999999999999987654
No 242
>PRK13388 acyl-CoA synthetase; Provisional
Probab=30.87 E-value=5.8e+02 Score=26.02 Aligned_cols=95 Identities=11% Similarity=0.088 Sum_probs=61.4
Q ss_pred CCCceEEEeCC---C----CcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcc--hHHHHHHHHHcCCeEeecC
Q 043601 40 YGSKSALIDAD---S----GESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQ--FPICLLGVIAIGGIATTAN 110 (488)
Q Consensus 40 ~p~~~a~~~~~---~----~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~--~~~~~lA~~~~G~~~v~l~ 110 (488)
.++.++++-.. . +..+|++.+...+..+.. ..+++++|++....|-... ++..+++.+..|+..+. .
T Consensus 148 ~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~---~~~~~~~d~~l~~~p~~~~~~~~~~~~~~l~~G~~~v~-~ 223 (540)
T PRK13388 148 DAMDPFMLIFTSGTTGAPKAVRCSHGRLAFAGRALTE---RFGLTRDDVCYVSMPLFHSNAVMAGWAPAVASGAAVAL-P 223 (540)
T ss_pred CCCCeEEEEECCCCCCCCCEEEecHHHHHHHHHHHHH---HhCCCCCCEEEEeeCchhhcchHHHHHHHHHcCcEEEE-C
Confidence 35677765321 1 246888888765554433 3478899998877765422 22334556777877664 4
Q ss_pred CCCCHHHHHHHHhhcCCeEEEEccccHH
Q 043601 111 PVYTVSELSKQVKDSSPKLVVTVPELWE 138 (488)
Q Consensus 111 ~~~~~~~l~~~l~~~~~~~vi~~~~~~~ 138 (488)
+..+...+...+++.++.++........
T Consensus 224 ~~~~~~~~~~~i~~~~vt~~~~~p~~l~ 251 (540)
T PRK13388 224 AKFSASGFLDDVRRYGATYFNYVGKPLA 251 (540)
T ss_pred CCCCHHHHHHHHHHhCCeEEEehHHHHH
Confidence 5677888889999999998876544433
No 243
>PF06543 Lac_bphage_repr: Lactococcus bacteriophage repressor; InterPro: IPR009498 This entry represents the C terminus of various Lactococcus bacteriophage repressor proteins.
Probab=30.30 E-value=39 Score=21.18 Aligned_cols=23 Identities=22% Similarity=0.202 Sum_probs=19.9
Q ss_pred cEEEEccCCCcHHHHHHHHhhCC
Q 043601 312 KGIGSGAAPLRKELVEECSKNLP 334 (488)
Q Consensus 312 r~v~~~G~~l~~~~~~~~~~~~~ 334 (488)
+.+-++|.|++.+.-+.++..|+
T Consensus 22 ~wvSf~GrPltdevK~a~k~i~~ 44 (49)
T PF06543_consen 22 KWVSFDGRPLTDEVKEAMKLIFG 44 (49)
T ss_pred HheeeCCeeCCHHHHHHHHHHHh
Confidence 35788999999999999988876
No 244
>PRK07788 acyl-CoA synthetase; Validated
Probab=30.20 E-value=2.2e+02 Score=29.08 Aligned_cols=85 Identities=12% Similarity=0.069 Sum_probs=58.6
Q ss_pred cceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcch-HHHHHHHHHcCCeEeecCCCCCHHHHHHHHhhcCCeEEE
Q 043601 53 ESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQF-PICLLGVIAIGGIATTANPVYTVSELSKQVKDSSPKLVV 131 (488)
Q Consensus 53 ~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~-~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi 131 (488)
..+|++.+...+. ......++++++++....|-...+ +..+++++..|+..+.. ...+++.+...+++.++..++
T Consensus 225 v~~s~~~~~~~~~---~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~l~~G~~~v~~-~~~~~~~~~~~i~~~~vt~~~ 300 (549)
T PRK07788 225 APRPEPSPLAPLA---GLLSRVPFRAGETTLLPAPMFHATGWAHLTLAMALGSTVVLR-RRFDPEATLEDIAKHKATALV 300 (549)
T ss_pred EeccCccHHHHHH---HHHhhCCCCcCCeEEEccchHHHHHHHHHHHHHHhCCEEEEC-CCCCHHHHHHHHHHhCCcEEE
Confidence 4567776655433 334455788899887776654332 23356677888887766 567788889999999999999
Q ss_pred EccccHHHHh
Q 043601 132 TVPELWERVK 141 (488)
Q Consensus 132 ~~~~~~~~~~ 141 (488)
..+.....+.
T Consensus 301 ~~P~~~~~l~ 310 (549)
T PRK07788 301 VVPVMLSRIL 310 (549)
T ss_pred EHHHHHHHHH
Confidence 8877766553
No 245
>PRK06381 threonine synthase; Validated
Probab=29.95 E-value=1.8e+02 Score=27.37 Aligned_cols=89 Identities=11% Similarity=-0.071 Sum_probs=56.0
Q ss_pred CceEEEeCCCCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHHcCCeEeecCCCCCHHHHHHH
Q 043601 42 SKSALIDADSGESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQFPICLLGVIAIGGIATTANPVYTVSELSKQ 121 (488)
Q Consensus 42 ~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~ 121 (488)
.++.+-....+-+=||+. +.+..+...+.+.|. +.| +.+..+-.-....++|...|..+..+-|...+......
T Consensus 31 ~~i~~K~E~~nptGS~K~--R~a~~~l~~a~~~g~---~~l-v~aSsGN~g~alA~~aa~~G~~~~ivvp~~~~~~~~~~ 104 (319)
T PRK06381 31 RKIYLKFEGANPTGTQKD--RIAEAHVRRAMRLGY---SGI-TVGTCGNYGASIAYFARLYGLKAVIFIPRSYSNSRVKE 104 (319)
T ss_pred ceEEEEecCCCCccCcHH--HHHHHHHHHHHHcCC---CEE-EEeCCcHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHH
Confidence 356776654344555655 222233333344452 344 44566777778888889999866665555555555678
Q ss_pred HhhcCCeEEEEcccc
Q 043601 122 VKDSSPKLVVTVPEL 136 (488)
Q Consensus 122 l~~~~~~~vi~~~~~ 136 (488)
++..++++++++.+.
T Consensus 105 l~~~GA~V~~~~~~~ 119 (319)
T PRK06381 105 MEKYGAEIIYVDGKY 119 (319)
T ss_pred HHHcCCEEEEcCCCH
Confidence 999999999998653
No 246
>cd01448 TST_Repeat_1 Thiosulfate sulfurtransferase (TST), N-terminal, inactive domain. TST contains 2 copies of the Rhodanese Homology Domain; this is the 1st repeat, which does not contain the catalytically active Cys residue. The role of the 1st repeat is uncertain, but it is believed to be involved in protein interaction.
Probab=29.93 E-value=1.7e+02 Score=22.61 Aligned_cols=40 Identities=13% Similarity=0.220 Sum_probs=30.6
Q ss_pred HHHHHHHHcCCCCCCEEEEEcCC-CcchHHHHHHHHHcCCe
Q 043601 66 KVSHGFRHLGVTKHDVVLIFAPN-SIQFPICLLGVIAIGGI 105 (488)
Q Consensus 66 ~la~~L~~~g~~~g~~V~i~~~n-~~~~~~~~lA~~~~G~~ 105 (488)
.+...+...|+.++..|.++|.. +.....+.+.+...|..
T Consensus 66 ~~~~~~~~~~~~~~~~vv~~c~~g~~~a~~~~~~l~~~G~~ 106 (122)
T cd01448 66 EFAELLGSLGISNDDTVVVYDDGGGFFAARAWWTLRYFGHE 106 (122)
T ss_pred HHHHHHHHcCCCCCCEEEEECCCCCccHHHHHHHHHHcCCC
Confidence 34455667788899999999988 57777777778888864
No 247
>PLN02614 long-chain acyl-CoA synthetase
Probab=29.86 E-value=3.4e+02 Score=28.76 Aligned_cols=98 Identities=18% Similarity=0.188 Sum_probs=66.2
Q ss_pred CCceEEEeC---C----CCcceeHHHHHHHHHHHHHHHHH--cCCCCCCEEEEEcCCC--cchHHHHHHHHHcCCeEeec
Q 043601 41 GSKSALIDA---D----SGESLTFSQFKSIVIKVSHGFRH--LGVTKHDVVLIFAPNS--IQFPICLLGVIAIGGIATTA 109 (488)
Q Consensus 41 p~~~a~~~~---~----~~~~~Ty~el~~~~~~la~~L~~--~g~~~g~~V~i~~~n~--~~~~~~~lA~~~~G~~~v~l 109 (488)
|+.+|.+-- . +|-.+|++.+...+..+...+.. .++.++|++..++|-+ .+.. ..+.++..|+..+..
T Consensus 222 ~~d~a~I~yTSGTTG~PKGV~lth~nl~~~~~~~~~~~~~~~~~~~~~d~~l~~lPl~H~~~~~-~~~~~l~~G~~v~~~ 300 (666)
T PLN02614 222 KSDICTIMYTSGTTGDPKGVMISNESIVTLIAGVIRLLKSANAALTVKDVYLSYLPLAHIFDRV-IEECFIQHGAAIGFW 300 (666)
T ss_pred CCceEEEEEcCCCCCCCcEEEEecHHHHHHHHHHHhhccccccCCCCCcEEEEeccHHHHHHHH-HHHHHHHhCCEEEEe
Confidence 566666422 1 23578999988776655544421 3577899888888755 3333 344556788877665
Q ss_pred CCCCCHHHHHHHHhhcCCeEEEEccccHHHHh
Q 043601 110 NPVYTVSELSKQVKDSSPKLVVTVPELWERVK 141 (488)
Q Consensus 110 ~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~ 141 (488)
+ .+...+...++..++.+++.-+.....+.
T Consensus 301 ~--~~~~~~~~~i~~~~~T~~~~vP~~~~~l~ 330 (666)
T PLN02614 301 R--GDVKLLIEDLGELKPTIFCAVPRVLDRVY 330 (666)
T ss_pred C--CCHHHHHHHHHHhCCeEEEecHHHHHHHH
Confidence 3 36788889999999999998877766553
No 248
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=29.84 E-value=4.6e+02 Score=30.39 Aligned_cols=98 Identities=16% Similarity=0.163 Sum_probs=67.3
Q ss_pred CCCceEEEeC---CC----CcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcchHH-HHHHHHHcCCeEeecCC
Q 043601 40 YGSKSALIDA---DS----GESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQFPI-CLLGVIAIGGIATTANP 111 (488)
Q Consensus 40 ~p~~~a~~~~---~~----~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~-~~lA~~~~G~~~v~l~~ 111 (488)
.|+..|.+-. .. +..+|.+.+........ ...+++++|++....+-+.+.-+ -++..+..|+..+..++
T Consensus 596 ~~~~~a~i~~TSGSTG~PKgV~~~h~~l~~~~~~~~---~~~~~~~~d~~l~~~~~~fd~~~~~~~~~l~~G~~l~~~~~ 672 (1296)
T PRK10252 596 QPHHTAYIIFTSGSTGRPKGVMVGQTAIVNRLLWMQ---NHYPLTADDVVLQKTPCSFDVSVWEFFWPFIAGAKLVMAEP 672 (1296)
T ss_pred CCCCeEEEEECCCCCCCCCEEEeccHHHHHHHHHHH---HhcCCCCCCEEEEeCCcchhhhHHHHHHHHhCCCEEEECCh
Confidence 4566665422 11 25688887765544333 34588999999988887655433 46777888998887765
Q ss_pred C--CCHHHHHHHHhhcCCeEEEEccccHHHH
Q 043601 112 V--YTVSELSKQVKDSSPKLVVTVPELWERV 140 (488)
Q Consensus 112 ~--~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 140 (488)
. .++..+...+++.++.++...+.....+
T Consensus 673 ~~~~~~~~~~~~i~~~~vt~~~~~Ps~l~~l 703 (1296)
T PRK10252 673 EAHRDPLAMQQFFAEYGVTTTHFVPSMLAAF 703 (1296)
T ss_pred hccCCHHHHHHHHHHcCCeEEEeCHHHHHHH
Confidence 3 4678888999999999988877655443
No 249
>PRK10287 thiosulfate:cyanide sulfurtransferase; Provisional
Probab=29.78 E-value=1.8e+02 Score=22.01 Aligned_cols=50 Identities=12% Similarity=0.057 Sum_probs=35.1
Q ss_pred cceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHHcCCeEeec
Q 043601 53 ESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQFPICLLGVIAIGGIATTA 109 (488)
Q Consensus 53 ~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l 109 (488)
..+.+.++.+ .+.+.+..+++.|.++|.++.....+...+...|...+-.
T Consensus 41 iniP~~~l~~-------~l~~l~~~~~~~IVlyC~~G~rS~~aa~~L~~~G~~~v~~ 90 (104)
T PRK10287 41 INIPLKEVKE-------RIATAVPDKNDTVKLYCNAGRQSGQAKEILSEMGYTHAEN 90 (104)
T ss_pred EECCHHHHHH-------HHHhcCCCCCCeEEEEeCCChHHHHHHHHHHHcCCCeEEe
Confidence 3466665543 3445555667789999999888888888888889765533
No 250
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=29.77 E-value=4.2e+02 Score=27.68 Aligned_cols=98 Identities=11% Similarity=0.023 Sum_probs=66.1
Q ss_pred CCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHH-hhhhhhcCCCCcEEEEecchhhHHhHHHHHHHHhhCCceEEEcC
Q 043601 189 KQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMT-AMDQELAGALDYVTLCVLPMFHVFGLSFVVYAQLQKGNCVVSMR 267 (488)
Q Consensus 189 ~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~~ 267 (488)
.++.+|++.... .+|. .-.+|...+...+... ......+..+++++...+|..--+ ...+++++..|+..+.+.
T Consensus 70 ~p~~~Al~~~~~-~~~~--~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~--~~~~lA~~~~Gav~v~i~ 144 (625)
T TIGR02188 70 RPDKVAIIWEGD-EPGE--VRKITYRELHREVCRFANVLKSLGVKKGDRVAIYMPMIPEA--AIAMLACARIGAIHSVVF 144 (625)
T ss_pred CCCCeEEEEEcC-CCCc--eEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH--HHHHHHHHHhCCEEeccC
Confidence 456777764321 1222 3357888877652221 112234567889998888765433 356788899999988875
Q ss_pred -CCCHHHHHHHHHhcCccEEEecHH
Q 043601 268 -KFDLETALRAIEKYRVTHWWVVPP 291 (488)
Q Consensus 268 -~~~~~~~~~~l~~~~~t~l~~~p~ 291 (488)
.+.++.+...+++.++..+++...
T Consensus 145 ~~~~~~~l~~~l~~~~~~~li~~~~ 169 (625)
T TIGR02188 145 GGFSAEALADRINDAGAKLVITADE 169 (625)
T ss_pred CCCCHHHHHHHHHhcCCCEEEEcCc
Confidence 478899999999999999988654
No 251
>PRK10696 tRNA 2-thiocytidine biosynthesis protein TtcA; Provisional
Probab=29.77 E-value=4.3e+02 Score=23.96 Aligned_cols=78 Identities=9% Similarity=0.146 Sum_probs=49.3
Q ss_pred eHHHHHH-HHHHHHHHHHHcC-CCCCCEEEEEcCCCcchHHHHHHHHHc------C--CeEeecCCC---CCHHHHHHHH
Q 043601 56 TFSQFKS-IVIKVSHGFRHLG-VTKHDVVLIFAPNSIQFPICLLGVIAI------G--GIATTANPV---YTVSELSKQV 122 (488)
Q Consensus 56 Ty~el~~-~~~~la~~L~~~g-~~~g~~V~i~~~n~~~~~~~~lA~~~~------G--~~~v~l~~~---~~~~~l~~~l 122 (488)
++..+.+ ..+++.+.+.+.+ +.+|++|+|.+.-+.+.++.+..+... + ...+-++.. ++.+.+..+.
T Consensus 4 ~~~~~~~~~~~~v~~~i~~~~li~~~~kilVa~SGG~DS~~LL~ll~~l~~~~~~~~~l~av~vd~g~~~~~~~~~~~~~ 83 (258)
T PRK10696 4 EFNKLQKRLRRQVGQAIADFNMIEEGDRVMVCLSGGKDSYTLLDILLNLQKRAPINFELVAVNLDQKQPGFPEHVLPEYL 83 (258)
T ss_pred chhHHHHHHHHHHHHHHHHcCCCCCCCEEEEEecCCHHHHHHHHHHHHHHHhCCCCeEEEEEEecCCCCCCCHHHHHHHH
Confidence 3344444 3455666677754 578999999999999998887666442 2 244445543 3344556666
Q ss_pred hhcCCeEEEEc
Q 043601 123 KDSSPKLVVTV 133 (488)
Q Consensus 123 ~~~~~~~vi~~ 133 (488)
+..+..+.+.+
T Consensus 84 ~~lgI~~~v~~ 94 (258)
T PRK10696 84 ESLGVPYHIEE 94 (258)
T ss_pred HHhCCCEEEEE
Confidence 77776666554
No 252
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=29.38 E-value=2.7e+02 Score=29.31 Aligned_cols=80 Identities=9% Similarity=-0.039 Sum_probs=59.3
Q ss_pred hhhccHHHHHHhhHHh-hhhhhcCCCCcEEEEecchhhHHhHHHHHHHHhhCCceEEEc-CCCCHHHHHHHHHhcCccEE
Q 043601 209 AILTHKNFIASSLMTA-MDQELAGALDYVTLCVLPMFHVFGLSFVVYAQLQKGNCVVSM-RKFDLETALRAIEKYRVTHW 286 (488)
Q Consensus 209 v~~t~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~-~~~~~~~~~~~l~~~~~t~l 286 (488)
..+|...+...+.... .....+..++|++...+|..--.- ..+++++..|+..+.+ +.+.++.+...+++.++..+
T Consensus 91 ~~~Ty~eL~~~v~~lA~~L~~~Gv~~GDrV~i~~~n~~e~~--~~~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~l 168 (647)
T PTZ00237 91 IKLTYYQLYEKVCEFSRVLLNLNISKNDNVLIYMANTLEPL--IAMLSCARIGATHCVLFDGYSVKSLIDRIETITPKLI 168 (647)
T ss_pred EEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHH--HHHHHHHHhCcEEEeeCCCCCHHHHHHHHHhcCCCEE
Confidence 4578888876632211 222346789999999888765433 5677888899998877 45889999999999999999
Q ss_pred EecH
Q 043601 287 WVVP 290 (488)
Q Consensus 287 ~~~p 290 (488)
++..
T Consensus 169 i~~~ 172 (647)
T PTZ00237 169 ITTN 172 (647)
T ss_pred EEcc
Confidence 9864
No 253
>PLN02356 phosphateglycerate kinase
Probab=29.26 E-value=3.3e+02 Score=26.96 Aligned_cols=88 Identities=10% Similarity=-0.102 Sum_probs=53.2
Q ss_pred ceEEEeCCCCcceeHHHHHHHHHHHHHHHHHcCC-CCCCEEEEEcCCCcchHHHHHHHHHcCCeEeecCCCCCHHHHHHH
Q 043601 43 KSALIDADSGESLTFSQFKSIVIKVSHGFRHLGV-TKHDVVLIFAPNSIQFPICLLGVIAIGGIATTANPVYTVSELSKQ 121 (488)
Q Consensus 43 ~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~-~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~ 121 (488)
++.+-....+.+=|+++ +-+..+-..+.+.|. +++..|+ ....+-.-....++|...|..++.+-|.....+....
T Consensus 69 ~v~~KlE~~nPtGS~Kd--R~A~~~i~~a~~~g~~~~~g~Vv-eaSSGN~g~alA~~aa~~G~~~~ivvP~~~s~~K~~~ 145 (423)
T PLN02356 69 EILGKCEFLNPGGSVKD--RVAVKIIEEALESGQLFPGGVVT-EGSAGSTAISLATVAPAYGCKCHVVIPDDVAIEKSQI 145 (423)
T ss_pred EEEEEeccCCCCCCHHH--HHHHHHHHHHHhCCccCCCCEEE-EeCCHHHHHHHHHHHHHcCCcEEEEECCCCcHHHHHH
Confidence 34444432233444442 223333333334444 3666554 4455555778888888999866666566555666789
Q ss_pred HhhcCCeEEEEc
Q 043601 122 VKDSSPKLVVTV 133 (488)
Q Consensus 122 l~~~~~~~vi~~ 133 (488)
++.++++++.++
T Consensus 146 ir~~GAeVi~v~ 157 (423)
T PLN02356 146 LEALGATVERVR 157 (423)
T ss_pred HHHcCCEEEEEC
Confidence 999999999985
No 254
>PRK10595 SOS cell division inhibitor; Provisional
Probab=29.23 E-value=2.1e+02 Score=23.90 Aligned_cols=65 Identities=11% Similarity=0.120 Sum_probs=39.9
Q ss_pred HHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHHcCCeEeecC--C-CCCHHH---HHHHHhhcCCeEEEE
Q 043601 68 SHGFRHLGVTKHDVVLIFAPNSIQFPICLLGVIAIGGIATTAN--P-VYTVSE---LSKQVKDSSPKLVVT 132 (488)
Q Consensus 68 a~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~--~-~~~~~~---l~~~l~~~~~~~vi~ 132 (488)
+.+|.+.|+..+..+.|...+..+.+-++-=|++.|..-+.+- | ..+.+. ++...+..++-.++.
T Consensus 70 ~~~L~~~Gl~l~rvl~v~~~~~~d~Lwa~EqaLrsG~~~aVL~Wlp~~l~~~~~RRLQlAAe~g~~l~fl~ 140 (164)
T PRK10595 70 REWLQASGLPLTKVMQLSQLSPCHTVEAMERALRTGNYSVVLGWLPDELTEEEHARLVDAAQEGNAMGFIM 140 (164)
T ss_pred HHHHHHcCCCcccEEEEecCCcHHHHHHHHHHHhhCCCcEEEECCcccCCHHHHHHHHHHHHhCCCEEEEE
Confidence 5677778887777666666777788777788888885333332 3 555443 334444555544444
No 255
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=29.19 E-value=4.5e+02 Score=27.33 Aligned_cols=103 Identities=12% Similarity=0.013 Sum_probs=65.3
Q ss_pred CCCEEEEEcc--cCCCCCCchhhhccHHHHHHhhHHhhhhhhcCCCCcEEEEecchhhHHhHHHHHHHHhhCCceEEEc-
Q 043601 190 QTDTAALLYS--SGTTGVGKGAILTHKNFIASSLMTAMDQELAGALDYVTLCVLPMFHVFGLSFVVYAQLQKGNCVVSM- 266 (488)
Q Consensus 190 ~~~~a~i~~T--SGtTG~pK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~- 266 (488)
++.++++... .+++|. ...+|...+...+............+++++...++-... +...+++++..|+..+.+
T Consensus 48 ~~~~a~~~~~~~~~~~g~--~~~~Ty~el~~~~~~lA~~L~~~~~~gd~V~l~~~n~~e--~~~~~lA~~~aG~v~vpl~ 123 (612)
T PRK12476 48 GDTVAYRYLDHSHSAAGC--AVELTWTQLGVRLRAVGARLQQVAGPGDRVAILAPQGID--YVAGFFAAIKAGTIAVPLF 123 (612)
T ss_pred CCceEEEEEccCCCCCCc--ceEEeHHHHHHHHHHHHHHHHHhcCCCCEEEEECCCChh--HHHHHHHHHHcCceeEecC
Confidence 4566765432 112232 235688877765322111111125788888888776643 336678899999998876
Q ss_pred CC-CC--HHHHHHHHHhcCccEEEecHHHHHHH
Q 043601 267 RK-FD--LETALRAIEKYRVTHWWVVPPIILAL 296 (488)
Q Consensus 267 ~~-~~--~~~~~~~l~~~~~t~l~~~p~~~~~l 296 (488)
+. .. ++++...+++.++..+++.+..+..+
T Consensus 124 ~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~ 156 (612)
T PRK12476 124 APELPGHAERLDTALRDAEPTVVLTTTAAAEAV 156 (612)
T ss_pred CCCcchhHHHHHHHHHhCCCCEEEEcHHHHHHH
Confidence 33 22 67899999999999999988766543
No 256
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=29.18 E-value=3.1e+02 Score=27.24 Aligned_cols=12 Identities=0% Similarity=-0.033 Sum_probs=5.9
Q ss_pred HhhcCCeEEEEc
Q 043601 122 VKDSSPKLVVTV 133 (488)
Q Consensus 122 l~~~~~~~vi~~ 133 (488)
+...+++..+++
T Consensus 121 l~~~Gi~v~~vd 132 (432)
T PRK06702 121 LRKLGIDVTFFN 132 (432)
T ss_pred HHHCCCEEEEEC
Confidence 444555555544
No 257
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=28.97 E-value=3.8e+02 Score=26.82 Aligned_cols=69 Identities=12% Similarity=0.118 Sum_probs=45.1
Q ss_pred cceeHHHHHHHHHHH--------------HHHH-HHcCCCCCCEEEEEcCCCcchHHHHHH-HHHcCCeEeec-------
Q 043601 53 ESLTFSQFKSIVIKV--------------SHGF-RHLGVTKHDVVLIFAPNSIQFPICLLG-VIAIGGIATTA------- 109 (488)
Q Consensus 53 ~~~Ty~el~~~~~~l--------------a~~L-~~~g~~~g~~V~i~~~n~~~~~~~~lA-~~~~G~~~v~l------- 109 (488)
..-||.+|.+.+..+ |..| ...++++||.| .+..++...-| +...|++++=+
T Consensus 76 gd~s~~~LE~~vAe~lG~e~aV~v~sGTaAl~ll~~l~v~pGd~V-----p~n~~f~Tt~ahI~~~Ga~fvDi~~d~a~~ 150 (460)
T PRK13237 76 GSRNFYHLEETVQEYYGFKHVVPTHQGRGAENLLSRIAIKPGQYV-----PGNMYFTTTRYHQELNGGIFVDIIIDEAHD 150 (460)
T ss_pred CCCcHHHHHHHHHHHHCCCeEEEeCCHHHHHHHHHHhCCCCcCEE-----CCccchHhhHHHHHhCCcEEEeeecccccc
Confidence 445788888876543 3333 34589999964 33445555555 78888877633
Q ss_pred -------CCCCCHHHHHHHHhhcC
Q 043601 110 -------NPVYTVSELSKQVKDSS 126 (488)
Q Consensus 110 -------~~~~~~~~l~~~l~~~~ 126 (488)
...++.+.++..+...+
T Consensus 151 ~~~~~p~tgnlD~d~Le~~I~~~~ 174 (460)
T PRK13237 151 AQSDHPFKGNVDLDKLQALIDEVG 174 (460)
T ss_pred cccCCCCCCCcCHHHHHHHhcccc
Confidence 44568889998887643
No 258
>TIGR01137 cysta_beta cystathionine beta-synthase. Members of this family closely resemble cysteine synthase but contain an additional C-terminal CBS domain. The function of any bacterial member included in this family is proposed but not proven.
Probab=28.90 E-value=3.8e+02 Score=26.73 Aligned_cols=90 Identities=10% Similarity=-0.082 Sum_probs=56.4
Q ss_pred CceEEEeCCCCcceeHHHHHHHHHHHHHHHHHcCC-CCCCEEEEEcCCCcchHHHHHHHHHcCCeEeecCCCCCHHHHHH
Q 043601 42 SKSALIDADSGESLTFSQFKSIVIKVSHGFRHLGV-TKHDVVLIFAPNSIQFPICLLGVIAIGGIATTANPVYTVSELSK 120 (488)
Q Consensus 42 ~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~-~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~ 120 (488)
.++.+-....+.+-|++.= .....+... .+.|. .+|+.|.- +..+-.-....++|.+.|..+..+-|...+.....
T Consensus 26 ~~i~~K~E~~nptGS~K~R-~a~~~l~~a-~~~g~~~~g~~vv~-~ssGN~g~alA~~a~~~G~~~~iv~p~~~~~~k~~ 102 (454)
T TIGR01137 26 CELLAKCEFFNPGGSVKDR-IALRMIEDA-EASGRLKPGDTIIE-PTSGNTGIGLALVAAIKGYKCIIVLPEKMSNEKVD 102 (454)
T ss_pred ceEEEEEhhcCCCcchHHH-HHHHHHHHH-HHcCCCCCCCEEEE-eCCcHHHHHHHHHHHHcCCeEEEEeCCCcCHHHHH
Confidence 3566655433344444432 122233333 33454 67776544 46667777788888999987666666555566777
Q ss_pred HHhhcCCeEEEEcc
Q 043601 121 QVKDSSPKLVVTVP 134 (488)
Q Consensus 121 ~l~~~~~~~vi~~~ 134 (488)
.++..++++++++.
T Consensus 103 ~~~~~GA~v~~~~~ 116 (454)
T TIGR01137 103 VLKALGAEIVRTPT 116 (454)
T ss_pred HHHHCCCEEEEcCC
Confidence 88999999999875
No 259
>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]
Probab=28.59 E-value=1.7e+02 Score=27.12 Aligned_cols=64 Identities=25% Similarity=0.163 Sum_probs=47.3
Q ss_pred CCCCCCEEEEEcCCCcchHHHHHHHHHcCCe-EeecCCCCCHHHHHHHHhhcCCeEEEEccccHH
Q 043601 75 GVTKHDVVLIFAPNSIQFPICLLGVIAIGGI-ATTANPVYTVSELSKQVKDSSPKLVVTVPELWE 138 (488)
Q Consensus 75 g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~-~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~ 138 (488)
.+++||.|+=-..||.---+.+--|-..|+- .-.+.-+-..+++...|+..+++.||++++...
T Consensus 157 ~L~~GD~vIQNganS~VG~~ViQlaka~GiktinvVRdR~~ieel~~~Lk~lGA~~ViTeeel~~ 221 (354)
T KOG0025|consen 157 QLNKGDSVIQNGANSGVGQAVIQLAKALGIKTINVVRDRPNIEELKKQLKSLGATEVITEEELRD 221 (354)
T ss_pred hcCCCCeeeecCcccHHHHHHHHHHHHhCcceEEEeecCccHHHHHHHHHHcCCceEecHHHhcc
Confidence 4688998888888875544444455556653 334555667899999999999999999987654
No 260
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=28.54 E-value=5.4e+02 Score=29.33 Aligned_cols=98 Identities=12% Similarity=0.056 Sum_probs=65.4
Q ss_pred CCCceEEEeCCCC-------cceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCc--chHHHHHHHHHcCCeEeecC
Q 043601 40 YGSKSALIDADSG-------ESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSI--QFPICLLGVIAIGGIATTAN 110 (488)
Q Consensus 40 ~p~~~a~~~~~~~-------~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~--~~~~~~lA~~~~G~~~v~l~ 110 (488)
.|+.++.+-..+| -.+|.+.+...+..... ..+++++|++....|-.. .+...++..+..|...+..+
T Consensus 791 ~~~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~---~~~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~G~~~~~~~ 867 (1140)
T PRK06814 791 DPDDPAVILFTSGSEGTPKGVVLSHRNLLANRAQVAA---RIDFSPEDKVFNALPVFHSFGLTGGLVLPLLSGVKVFLYP 867 (1140)
T ss_pred CCCCcEEEEECCCccCCCcEEEecHHHHHHHHHHHHH---hhCCCCcCEEEEecchHHHHHHHHHHHHHHHcCCEEEEec
Confidence 4566666432112 46888888766655544 346788999888777532 23345667778898887776
Q ss_pred CCCCHHHHHHHHhhcCCeEEEEccccHHHH
Q 043601 111 PVYTVSELSKQVKDSSPKLVVTVPELWERV 140 (488)
Q Consensus 111 ~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 140 (488)
.....+.+.+.+++.++..+...+.....+
T Consensus 868 ~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l 897 (1140)
T PRK06814 868 SPLHYRIIPELIYDTNATILFGTDTFLNGY 897 (1140)
T ss_pred CcccHHHHHHHHHhcCCEEEEecHHHHHHH
Confidence 555666777888999999888776554433
No 261
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=28.47 E-value=6.3e+02 Score=25.64 Aligned_cols=98 Identities=12% Similarity=0.175 Sum_probs=64.6
Q ss_pred cCCCceEEEeC---CCC----cceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcc--hHHHHHHHHHcCCeEeec
Q 043601 39 SYGSKSALIDA---DSG----ESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQ--FPICLLGVIAIGGIATTA 109 (488)
Q Consensus 39 ~~p~~~a~~~~---~~~----~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~--~~~~~lA~~~~G~~~v~l 109 (488)
..++.+|++-. ..| ..+|++.+...+.... ...+++.++++....|-... ++..++..+..|...+..
T Consensus 192 ~~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~---~~~~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~g~~~~~~ 268 (538)
T TIGR03208 192 PSPDDVTQLIYTSGTTGEPKGVMHTANTLFSNIHPYA---ERLELGGGDVILMASPMAHQTGFMYGLMMPLILNATAVLQ 268 (538)
T ss_pred CCCCCeEEEEECCCCCCCCcEEEeehHHHHHHHHHHH---hhcCCCCCCeEEEeCCchhHHHHHHHHHHHHHcCCEEEec
Confidence 34566775422 122 4578877766544333 33467889988888875532 345567777788876644
Q ss_pred CCCCCHHHHHHHHhhcCCeEEEEccccHHHH
Q 043601 110 NPVYTVSELSKQVKDSSPKLVVTVPELWERV 140 (488)
Q Consensus 110 ~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 140 (488)
+.++...+...+++.++.++.........+
T Consensus 269 -~~~~~~~~~~~l~~~~vt~~~~~p~~~~~l 298 (538)
T TIGR03208 269 -DIWNPARAAELIRETGVTFTMASTPFLTDL 298 (538)
T ss_pred -CccCHHHHHHHHHHhCCeEEecCHHHHHHH
Confidence 567888889999999999888766655443
No 262
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=28.45 E-value=6.8e+02 Score=26.45 Aligned_cols=87 Identities=9% Similarity=-0.080 Sum_probs=60.1
Q ss_pred hhccHHHHHHhhHHh-hhhhhcCCCCcEEEEecchhhHHhHHHHHHHHhhCCceEEEcC-CCCHHHHHHHHHhcCccEEE
Q 043601 210 ILTHKNFIASSLMTA-MDQELAGALDYVTLCVLPMFHVFGLSFVVYAQLQKGNCVVSMR-KFDLETALRAIEKYRVTHWW 287 (488)
Q Consensus 210 ~~t~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~l~~~~~t~l~ 287 (488)
.+|...+...+.... .....+..+++++...++-..- +....++++..|+..+.+. ...++++...++..+++.++
T Consensus 76 ~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e--w~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~v~ 153 (660)
T PLN02430 76 WKTYKEVYEEVLQIGSALRASGAEPGSRVGIYGSNCPQ--WIVAMEACAAHSLICVPLYDTLGPGAVDYIVDHAEIDFVF 153 (660)
T ss_pred EEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHH--HHHHHHHHHHcCCeEEEeccCCCHHHHHHHHhccCCCEEE
Confidence 357777776532211 1223356788888777665443 2356788899999998875 47889999999999999999
Q ss_pred ecHHHHHHHHh
Q 043601 288 VVPPIILALAK 298 (488)
Q Consensus 288 ~~p~~~~~l~~ 298 (488)
+....+..++.
T Consensus 154 ~~~~~~~~~~~ 164 (660)
T PLN02430 154 VQDKKIKELLE 164 (660)
T ss_pred ECHHHHHHHHh
Confidence 98765554443
No 263
>PF08479 POTRA_2: POTRA domain, ShlB-type; InterPro: IPR013686 The POTRA domain (for polypeptide-transport-associated domain) is found towards the N terminus of ShlB family proteins (IPR005565 from INTERPRO). ShlB is important in the secretion and activation of the haemolysin ShlA. It has been postulated that the POTRA domain has a chaperone-like function over ShlA; it may fold back into the C-terminal beta-barrel channel []. ; PDB: 2X8X_X 2QDZ_A 3NJT_A 3MC8_A 3MC9_B.
Probab=27.84 E-value=92 Score=21.87 Aligned_cols=25 Identities=20% Similarity=0.456 Sum_probs=22.1
Q ss_pred CcceeHHHHHHHHHHHHHHHHHcCC
Q 043601 52 GESLTFSQFKSIVIKVSHGFRHLGV 76 (488)
Q Consensus 52 ~~~~Ty~el~~~~~~la~~L~~~g~ 76 (488)
|+.+|.++|.+.++++.+++++.|.
T Consensus 28 g~~l~~~~l~~~~~~l~~~y~~~GY 52 (76)
T PF08479_consen 28 GRCLTLADLQQLADALTNYYREKGY 52 (76)
T ss_dssp TSBB-HHHHHHHHHHHHHHHHHTT-
T ss_pred CCCcCHHHHHHHHHHHHHHHHHcCc
Confidence 7899999999999999999999886
No 264
>cd00640 Trp-synth-beta_II Tryptophan synthase beta superfamily (fold type II); this family of pyridoxal phosphate (PLP)-dependent enzymes catalyzes beta-replacement and beta-elimination reactions. This CD corresponds to aminocyclopropane-1-carboxylate deaminase (ACCD), tryptophan synthase beta chain (Trp-synth_B), cystathionine beta-synthase (CBS), O-acetylserine sulfhydrylase (CS), serine dehydratase (Ser-dehyd), threonine dehydratase (Thr-dehyd), diaminopropionate ammonia lyase (DAL), and threonine synthase (Thr-synth). ACCD catalyzes the conversion of 1-aminocyclopropane-1-carboxylate to alpha-ketobutyrate and ammonia. Tryptophan synthase folds into a tetramer, where the beta chain is the catalytic PLP-binding subunit and catalyzes the formation of L-tryptophan from indole and L-serine. CBS is a tetrameric hemeprotein that catalyzes condensation of serine and homocysteine to cystathionine. CS is a homodimer that catalyzes the formation of L-cysteine from O-acetyl-L-serine. Ser-dehy
Probab=27.69 E-value=4.4e+02 Score=23.45 Aligned_cols=92 Identities=12% Similarity=0.021 Sum_probs=55.6
Q ss_pred CCceEEEeCCCCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHHcCCeEeecCCCCCHHHHHH
Q 043601 41 GSKSALIDADSGESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQFPICLLGVIAIGGIATTANPVYTVSELSK 120 (488)
Q Consensus 41 p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~ 120 (488)
..++.+-..+.+.+-+++..- +..+...+.+.|..++..|.. ...+-.-....++|...|..++.+-|.........
T Consensus 14 ~~~l~~K~e~~~ptgS~K~R~--a~~~l~~a~~~g~~~~~~vv~-~ssGN~g~alA~~a~~~g~~~~v~~p~~~~~~~~~ 90 (244)
T cd00640 14 GANIYLKLEFLNPTGSFKDRG--ALNLILLAEEEGKLPKGVIIE-STGGNTGIALAAAAARLGLKCTIVMPEGASPEKVA 90 (244)
T ss_pred CCEEEEEecccCCcCCcHHHH--HHHHHHHHHHcCCCCCCEEEE-eCCcHHHHHHHHHHHHcCCCEEEEECCCCCHHHHH
Confidence 345666554333344454322 223333344444324555544 44456666777777789987766666666677788
Q ss_pred HHhhcCCeEEEEccc
Q 043601 121 QVKDSSPKLVVTVPE 135 (488)
Q Consensus 121 ~l~~~~~~~vi~~~~ 135 (488)
.++..+++++.++..
T Consensus 91 ~~~~~Ga~v~~~~~~ 105 (244)
T cd00640 91 QMRALGAEVVLVPGD 105 (244)
T ss_pred HHHHCCCEEEEECCC
Confidence 889999999998876
No 265
>PLN02654 acetate-CoA ligase
Probab=27.61 E-value=3.1e+02 Score=29.06 Aligned_cols=81 Identities=14% Similarity=0.094 Sum_probs=59.5
Q ss_pred hhhccHHHHHHhhHH-hhhhhhcCCCCcEEEEecchhhHHhHHHHHHHHhhCCceEEEcC-CCCHHHHHHHHHhcCccEE
Q 043601 209 AILTHKNFIASSLMT-AMDQELAGALDYVTLCVLPMFHVFGLSFVVYAQLQKGNCVVSMR-KFDLETALRAIEKYRVTHW 286 (488)
Q Consensus 209 v~~t~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~l~~~~~t~l 286 (488)
..+|...|...+... ......+..++|++...+|..--+ ...+++++..|+..+.+. .+.++.+...+++.++..+
T Consensus 119 ~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~pn~~e~--v~a~lA~~~~Gav~vpv~~~~~~~~l~~~l~~~~~~~l 196 (666)
T PLN02654 119 ASLTYSELLDRVCQLANYLKDVGVKKGDAVVIYLPMLMEL--PIAMLACARIGAVHSVVFAGFSAESLAQRIVDCKPKVV 196 (666)
T ss_pred EEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH--HHHHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEE
Confidence 357888887663221 122334577899998888775432 356788899999998874 5889999999999999999
Q ss_pred EecHH
Q 043601 287 WVVPP 291 (488)
Q Consensus 287 ~~~p~ 291 (488)
++...
T Consensus 197 i~~~~ 201 (666)
T PLN02654 197 ITCNA 201 (666)
T ss_pred EEcCc
Confidence 98654
No 266
>cd03466 Nitrogenase_NifN_2 Nitrogenase_nifN_2: A subgroup of the NifN subunit of the NifEN complex: NifN forms an alpha2beta2 tetramer with NifE. NifN and nifE are structurally homologous to nitrogenase MoFe protein beta and alpha subunits respectively. NifEN participates in the synthesis of the iron-molybdenum cofactor (FeMoco) of the MoFe protein. NifB-co (an iron and sulfur containing precursor of the FeMoco) from NifB is transferred to the NifEN complex where it is further processed to FeMoco. The nifEN bound precursor of FeMoco has been identified as a molybdenum-free, iron- and sulfur- containing analog of FeMoco. It has been suggested that this nifEN bound precursor also acts as a cofactor precursor in nitrogenase systems which require a cofactor other than FeMoco: i.e. iron-vanadium cofactor (FeVco) or iron only cofactor (FeFeco). This group also contains the Clostidium fused NifN-NifB protein.
Probab=27.54 E-value=4.6e+02 Score=25.97 Aligned_cols=56 Identities=13% Similarity=0.074 Sum_probs=27.5
Q ss_pred CCCEEEEEcCCCcchHHHHHHHHHcCCeEeecCCCCCHH----HHHHHHhhcCCeEEEEcc
Q 043601 78 KHDVVLIFAPNSIQFPICLLGVIAIGGIATTANPVYTVS----ELSKQVKDSSPKLVVTVP 134 (488)
Q Consensus 78 ~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~----~l~~~l~~~~~~~vi~~~ 134 (488)
.|.+|+|.++.+..+-++-+-. .+|..++.+-...... .++..+.......++++.
T Consensus 299 ~gkrv~v~g~~~~~~~l~~~L~-elG~~~~~v~~~~~~~~~~~~l~~~~~~~~~~~~v~~~ 358 (429)
T cd03466 299 FGRKAAIYGEPDFVVAITRFVL-ENGMVPVLIATGSESKKLKEKLEEDLKEYVEKCVILDG 358 (429)
T ss_pred CCCEEEEEcCHHHHHHHHHHHH-HCCCEEEEEEeCCCChHHHHHHHHHHHhcCCceEEEeC
Confidence 4677888776443333333322 5677654444333322 233334444555555553
No 267
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=27.45 E-value=6.3e+02 Score=25.81 Aligned_cols=99 Identities=18% Similarity=0.208 Sum_probs=68.7
Q ss_pred CCCceEEEeCC-------CCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCC--cchHHHHHHHHHcCCeEeecC
Q 043601 40 YGSKSALIDAD-------SGESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNS--IQFPICLLGVIAIGGIATTAN 110 (488)
Q Consensus 40 ~p~~~a~~~~~-------~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~--~~~~~~~lA~~~~G~~~v~l~ 110 (488)
.|+.+|++--. ++-.+|++.+...+..+...+... +++.|++...+|-. .-+...+++.+..|...+...
T Consensus 169 ~~~d~a~i~yTSGTTG~PKgv~~th~~~~~~~~~~~~~~~~~-~~~~d~~l~~lPl~H~~Gl~~~~~~~~~~G~~~v~~~ 247 (534)
T COG0318 169 DPDDLAFLLYTSGTTGLPKGVVLTHRNLLANAAGIAAALGGG-LTPDDVVLSWLPLFHIFGLIVGLLAPLLGGGTLVLLS 247 (534)
T ss_pred CCCCEEEEEeCCCCCCCCCEeEEecHhHHHHHHHHHHHhccc-CCCCceEEEecChHHHHHHHHHHHHHHHcCCEEEeCC
Confidence 46777775321 225689999998877766666532 67888777766644 345556777788898888777
Q ss_pred C-CCCHHHHHHHHhhcCCeEEEEccccHHH
Q 043601 111 P-VYTVSELSKQVKDSSPKLVVTVPELWER 139 (488)
Q Consensus 111 ~-~~~~~~l~~~l~~~~~~~vi~~~~~~~~ 139 (488)
+ .++...+...+...++.++..-+.....
T Consensus 248 ~~~f~~~~~~~~i~~~~~t~~~~vPt~~~~ 277 (534)
T COG0318 248 PEPFDPEEVLWLIEKYKVTVLSGVPTFLRE 277 (534)
T ss_pred CCCcCHHHHHHHHHHhcceEEecchHHHHH
Confidence 5 6888888888888887666655555444
No 268
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=27.08 E-value=5e+02 Score=26.47 Aligned_cols=98 Identities=12% Similarity=0.006 Sum_probs=63.6
Q ss_pred CCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHh-hhhhhcCCCCcEEEEecchhhHHhHHHHHHHHhhCCceEEEcC
Q 043601 189 KQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTA-MDQELAGALDYVTLCVLPMFHVFGLSFVVYAQLQKGNCVVSMR 267 (488)
Q Consensus 189 ~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~~ 267 (488)
.++.++++.... | ..+|+..+...+.... .....+..+++++...++-...+ ...+++++..|+..+..+
T Consensus 41 ~p~~~a~~~~~~---~----~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~--~~~~lA~~~~G~~~vpl~ 111 (546)
T PLN02330 41 YADKVAFVEAVT---G----KAVTYGEVVRDTRRFAKALRSLGLRKGQVVVVVLPNVAEY--GIVALGIMAAGGVFSGAN 111 (546)
T ss_pred CCCccEEEecCC---C----CcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHH--HHHHHHHHHhCcEeccCC
Confidence 355666653221 2 3578888776532211 11223456778877776655433 256788899999988775
Q ss_pred C-CCHHHHHHHHHhcCccEEEecHHHHHH
Q 043601 268 K-FDLETALRAIEKYRVTHWWVVPPIILA 295 (488)
Q Consensus 268 ~-~~~~~~~~~l~~~~~t~l~~~p~~~~~ 295 (488)
. ....++...+++.++..++..+..+..
T Consensus 112 ~~~~~~~l~~~l~~~~~~~~i~~~~~~~~ 140 (546)
T PLN02330 112 PTALESEIKKQAEAAGAKLIVTNDTNYGK 140 (546)
T ss_pred ccCCHHHHHHHHHhcCCeEEEEccchhhh
Confidence 4 567889999999999999887655443
No 269
>PRK07514 malonyl-CoA synthase; Validated
Probab=26.62 E-value=4.6e+02 Score=26.26 Aligned_cols=86 Identities=14% Similarity=-0.022 Sum_probs=59.5
Q ss_pred hhhccHHHHHHhhHHh-hhhhhcCCCCcEEEEecchhhHHhHHHHHHHHhhCCceEEEcCC-CCHHHHHHHHHhcCccEE
Q 043601 209 AILTHKNFIASSLMTA-MDQELAGALDYVTLCVLPMFHVFGLSFVVYAQLQKGNCVVSMRK-FDLETALRAIEKYRVTHW 286 (488)
Q Consensus 209 v~~t~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~l~~~~~t~l 286 (488)
..+|...+...+.... .....+..+++++....+... .+...+++++..|+..+..++ .....+...++..+++.+
T Consensus 27 ~~~Ty~eL~~~~~~la~~L~~~g~~~gd~v~i~~~~~~--e~~v~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~i 104 (504)
T PRK07514 27 LRYTYGDLDAASARLANLLVALGVKPGDRVAVQVEKSP--EALALYLATLRAGAVFLPLNTAYTLAELDYFIGDAEPALV 104 (504)
T ss_pred CEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCH--HHHHHHHHHHHcCcEEEECCCCCCHHHHHHHHHhCCCcEE
Confidence 3577777765522211 122334677888877776553 333667888999999998854 678899999999999999
Q ss_pred EecHHHHHHH
Q 043601 287 WVVPPIILAL 296 (488)
Q Consensus 287 ~~~p~~~~~l 296 (488)
+..+.....+
T Consensus 105 i~~~~~~~~~ 114 (504)
T PRK07514 105 VCDPANFAWL 114 (504)
T ss_pred EEccchhHHH
Confidence 9887665543
No 270
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=26.55 E-value=3.4e+02 Score=28.60 Aligned_cols=85 Identities=7% Similarity=-0.016 Sum_probs=56.0
Q ss_pred cceeHHHHHHH-HHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHHcCCeEeecCC---CCCHHHHHHHHhhcCCe
Q 043601 53 ESLTFSQFKSI-VIKVSHGFRHLGVTKHDVVLIFAPNSIQFPICLLGVIAIGGIATTANP---VYTVSELSKQVKDSSPK 128 (488)
Q Consensus 53 ~~~Ty~el~~~-~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~---~~~~~~l~~~l~~~~~~ 128 (488)
..+|.+.+... ..... ...+++++|++..+.+.+......+++.+..|+..+..+. ..+...+..++++.++.
T Consensus 281 V~~sh~~~~~~~~~~~~---~~~~~~~~d~~~~~~~~~~~~~~~~~~~L~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt 357 (655)
T PRK03584 281 IVHGHGGILLEHLKELG---LHCDLGPGDRFFWYTTCGWMMWNWLVSGLLVGATLVLYDGSPFYPDPNVLWDLAAEEGVT 357 (655)
T ss_pred EEECccHHHHHHHHHHH---HhcCCCCCCEEEEcCCchHHhHHHHHHHHHcCCEEEEeCCCCCCCCHHHHHHHHHHHCCE
Confidence 45676654322 22111 2347889998877666554443456788899998887653 23577888999999999
Q ss_pred EEEEccccHHHH
Q 043601 129 LVVTVPELWERV 140 (488)
Q Consensus 129 ~vi~~~~~~~~~ 140 (488)
.+.+.......+
T Consensus 358 ~~~~~P~~~~~l 369 (655)
T PRK03584 358 VFGTSAKYLDAC 369 (655)
T ss_pred EEEcCHHHHHHH
Confidence 888776665544
No 271
>COG1171 IlvA Threonine dehydratase [Amino acid transport and metabolism]
Probab=26.52 E-value=4.9e+02 Score=24.88 Aligned_cols=98 Identities=12% Similarity=0.041 Sum_probs=63.5
Q ss_pred cCCCceEEEeCCCCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHHcCCeEeecCCCCCHHHH
Q 043601 39 SYGSKSALIDADSGESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQFPICLLGVIAIGGIATTANPVYTVSEL 118 (488)
Q Consensus 39 ~~p~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l 118 (488)
+...++.+-..+....-+|+- .-.-+++.+ |...+-++.-.|+ +..+-..--..|||.++|...+.+-|..++..-
T Consensus 37 ~~g~~v~lK~E~lQ~~gSFK~-RGA~n~i~~-Ls~e~~~~~gVia--aSaGNHaQGvA~aa~~lGi~a~IvMP~~tp~~K 112 (347)
T COG1171 37 RLGAEIYLKRENLQPVGSFKI-RGAYNKLSS-LSEEEERAAGVIA--ASAGNHAQGVAYAAKRLGIKATIVMPETTPKIK 112 (347)
T ss_pred hhCceEEEeeccCcccccchh-hhHHHHHHh-cChhhhhcCceEE--ecCCcHHHHHHHHHHHhCCCEEEEecCCCcHHH
Confidence 355667776654344555553 234444444 4422112222343 444455566779999999988888888888888
Q ss_pred HHHHhhcCCeEEEEccccHHHH
Q 043601 119 SKQVKDSSPKLVVTVPELWERV 140 (488)
Q Consensus 119 ~~~l~~~~~~~vi~~~~~~~~~ 140 (488)
...++.+++.+++++..+....
T Consensus 113 v~a~r~~GaeVil~g~~~dda~ 134 (347)
T COG1171 113 VDATRGYGAEVILHGDNFDDAY 134 (347)
T ss_pred HHHHHhcCCEEEEECCCHHHHH
Confidence 8999999999999987765543
No 272
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=26.38 E-value=3.4e+02 Score=21.80 Aligned_cols=42 Identities=7% Similarity=0.029 Sum_probs=35.6
Q ss_pred HHHHHHHHHcCCeEeecCCCCCHHHHHHHHhhcCCeEEEEcc
Q 043601 93 PICLLGVIAIGGIATTANPVYTVSELSKQVKDSSPKLVVTVP 134 (488)
Q Consensus 93 ~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~ 134 (488)
.+....+-..|.-++-+..+.+.+++...+.+.+|++|..+.
T Consensus 21 ~iv~~~lr~~G~eVi~LG~~vp~e~i~~~a~~~~~d~V~lS~ 62 (137)
T PRK02261 21 KILDRALTEAGFEVINLGVMTSQEEFIDAAIETDADAILVSS 62 (137)
T ss_pred HHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcC
Confidence 344445557899999999999999999999999999999874
No 273
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=26.27 E-value=6.8e+02 Score=25.16 Aligned_cols=101 Identities=15% Similarity=0.027 Sum_probs=64.6
Q ss_pred CCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHh-hhhhhcCCCCcEEEEecchhhHHhHHHHHHHHhhCCceEEEcC
Q 043601 189 KQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTA-MDQELAGALDYVTLCVLPMFHVFGLSFVVYAQLQKGNCVVSMR 267 (488)
Q Consensus 189 ~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~~ 267 (488)
.++.++++.... .+.. -.+|...+...+.... .....+..+++++....+-..-. ...+++++..|+..+..+
T Consensus 20 ~p~~~a~~~~~~--~~~~--~~~ty~~l~~~v~~la~~L~~~g~~~~~~v~i~~~n~~~~--~~~~la~~~~G~~~v~l~ 93 (517)
T PRK08008 20 YGHKTALIFESS--GGVV--RRYSYLELNEEINRTANLFYSLGIRKGDKVALHLDNCPEF--IFCWFGLAKIGAIMVPIN 93 (517)
T ss_pred CCCceEEEcccC--CCcc--ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH--HHHHHHHHHcCeEEEEcC
Confidence 455677654321 1111 2356676665422211 11234567788888776665433 256678899999998885
Q ss_pred C-CCHHHHHHHHHhcCccEEEecHHHHHH
Q 043601 268 K-FDLETALRAIEKYRVTHWWVVPPIILA 295 (488)
Q Consensus 268 ~-~~~~~~~~~l~~~~~t~l~~~p~~~~~ 295 (488)
+ ..++.+...+++.++..++..+.....
T Consensus 94 ~~~~~~~l~~~l~~~~~~~l~~~~~~~~~ 122 (517)
T PRK08008 94 ARLLREESAWILQNSQASLLVTSAQFYPM 122 (517)
T ss_pred cccCHHHHHHHHHhcCceEEEEecchhHH
Confidence 4 688999999999999999988765443
No 274
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated
Probab=26.12 E-value=7.7e+02 Score=25.74 Aligned_cols=85 Identities=9% Similarity=0.036 Sum_probs=55.7
Q ss_pred hhccHHHHHHhhHHhhhhhhcCCCCcEEEEecchhhHHhHHHHHHHHhhCCceEEEc-CCCC---HHHHHHHHHhcCccE
Q 043601 210 ILTHKNFIASSLMTAMDQELAGALDYVTLCVLPMFHVFGLSFVVYAQLQKGNCVVSM-RKFD---LETALRAIEKYRVTH 285 (488)
Q Consensus 210 ~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~-~~~~---~~~~~~~l~~~~~t~ 285 (488)
.+|...+...+............+++++...++-.. .+...+++++..|+..+.+ +... ..++...+++.++..
T Consensus 55 ~~Ty~el~~~v~~lA~~L~~~~~~gd~V~i~~~n~~--e~~~~~lA~~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~~ 132 (631)
T PRK07769 55 DLTWSQFGARNRAVGARLQQVTKPGDRVAILAPQNL--DYLIAFFGALYAGRIAVPLFDPAEPGHVGRLHAVLDDCTPSA 132 (631)
T ss_pred EeeHHHHHHHHHHHHHHHHHhcCCCCEEEEEcCCCh--HHHHHHHHHHHcCCEEEeeCCCCccchHHHHHHHHHhCCCCE
Confidence 468887776532221111111577888877776554 3335678889999988866 3222 467888999999999
Q ss_pred EEecHHHHHHH
Q 043601 286 WWVVPPIILAL 296 (488)
Q Consensus 286 l~~~p~~~~~l 296 (488)
+++.......+
T Consensus 133 vi~~~~~~~~~ 143 (631)
T PRK07769 133 ILTTTDSAEGV 143 (631)
T ss_pred EEEChHHHHHH
Confidence 99987665443
No 275
>TIGR02981 phageshock_pspE phage shock operon rhodanese PspE. Members of this very narrowly defined protein family are proteins active as rhodanese (EC 2.8.1.1) and found in the extended variants of the phage shock protein (psp operon) in Escherichia coli and a few closely related species. Note that the designation phage shock protein PspE has been applied, incorrectly, in many instances where the genome lacks the phage shock regulon entirely.
Probab=26.07 E-value=2.3e+02 Score=21.34 Aligned_cols=50 Identities=12% Similarity=0.105 Sum_probs=35.7
Q ss_pred cceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHHcCCeEeec
Q 043601 53 ESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQFPICLLGVIAIGGIATTA 109 (488)
Q Consensus 53 ~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l 109 (488)
..+.+.++.+. +...+..++..|.++|.++.....+...+...|..-+-.
T Consensus 39 inip~~~l~~~-------l~~~~~~~~~~vvlyC~~G~rS~~aa~~L~~~G~~~v~~ 88 (101)
T TIGR02981 39 INIPLKEIKEH-------IATAVPDKNDTVKLYCNAGRQSGMAKDILLDMGYTHAEN 88 (101)
T ss_pred EECCHHHHHHH-------HHHhCCCCCCeEEEEeCCCHHHHHHHHHHHHcCCCeEEe
Confidence 45677766543 333344567789999999999999988999999765443
No 276
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=25.95 E-value=5.3e+02 Score=25.76 Aligned_cols=69 Identities=13% Similarity=0.145 Sum_probs=46.5
Q ss_pred cceeHHHHHHHHHHH--------------H-HHHHHcCCCCCCEEEEEcCCCcchHHHHHH-HHHcCCeEeec--C----
Q 043601 53 ESLTFSQFKSIVIKV--------------S-HGFRHLGVTKHDVVLIFAPNSIQFPICLLG-VIAIGGIATTA--N---- 110 (488)
Q Consensus 53 ~~~Ty~el~~~~~~l--------------a-~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA-~~~~G~~~v~l--~---- 110 (488)
..-||.+|.+++..+ | +.|...++++||.| + +..++...-+ +...|++++=+ +
T Consensus 69 g~~s~~~lE~~va~~~G~~~av~v~sGT~Al~ll~~l~l~pGDeV----p-sn~~f~Tt~ahIe~~Gav~vDi~~dea~~ 143 (450)
T TIGR02618 69 GSRNFYHLERTVRELYGFKYVVPTHQGRGAENLLSQIAIKPGDYV----P-GNMYFTTTRYHQEKNGATFVDIIIDEAHD 143 (450)
T ss_pred CCCcHHHHHHHHHHHHCCCeEEEcCCHHHHHHHHHHhCCCCcCEE----C-CceeHHHHHHHHHhCCeEEEeeecccccc
Confidence 345888888875433 3 33445689999976 3 3666777777 67888876666 2
Q ss_pred --------CCCCHHHHHHHHhhcC
Q 043601 111 --------PVYTVSELSKQVKDSS 126 (488)
Q Consensus 111 --------~~~~~~~l~~~l~~~~ 126 (488)
.+++.+.+...+...+
T Consensus 144 ~~~~~p~~GniD~~~Le~aI~~~~ 167 (450)
T TIGR02618 144 AQLNIPFKGNVDLKKLQKLIDEVG 167 (450)
T ss_pred cccCCCCCCCcCHHHHHHHhcccc
Confidence 2347888888887543
No 277
>PRK13383 acyl-CoA synthetase; Provisional
Probab=25.89 E-value=4.7e+02 Score=26.36 Aligned_cols=83 Identities=12% Similarity=0.055 Sum_probs=58.0
Q ss_pred hhccHHHHHHhhHHhhhhh---hcCCCCcEEEEecchhhHHhHHHHHHHHhhCCceEEEcCC-CCHHHHHHHHHhcCccE
Q 043601 210 ILTHKNFIASSLMTAMDQE---LAGALDYVTLCVLPMFHVFGLSFVVYAQLQKGNCVVSMRK-FDLETALRAIEKYRVTH 285 (488)
Q Consensus 210 ~~t~~~l~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~l~~~~~t~ 285 (488)
.+|...+...+. ..... .+..+++++...++-.- .+...+++++..|+..+..++ ...+.+...+++.++..
T Consensus 60 ~lTy~el~~~~~--~la~~L~~~gi~~g~~V~i~~~~~~--~~~~~~la~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ 135 (516)
T PRK13383 60 ALSYRELQRATE--SLARRLTRDGVAPGRAVGVMCRNGR--GFVTAVFAVGLLGADVVPISTEFRSDALAAALRAHHIST 135 (516)
T ss_pred cEeHHHHHHHHH--HHHHHHHhcCCCCCCEEEEECCCCH--HHHHHHHHHHHhCeEEEEcCccCCHHHHHHHHhcCCCCE
Confidence 467776665522 22222 34667888777765433 223556788899999998865 67899999999999999
Q ss_pred EEecHHHHHHH
Q 043601 286 WWVVPPIILAL 296 (488)
Q Consensus 286 l~~~p~~~~~l 296 (488)
++..+.+...+
T Consensus 136 ii~~~~~~~~~ 146 (516)
T PRK13383 136 VVADNEFAERI 146 (516)
T ss_pred EEEchhHHHHH
Confidence 99988766554
No 278
>PRK08162 acyl-CoA synthetase; Validated
Probab=25.84 E-value=4e+02 Score=27.11 Aligned_cols=86 Identities=9% Similarity=-0.040 Sum_probs=60.8
Q ss_pred hhccHHHHHHhhHHh-hhhhhcCCCCcEEEEecchhhHHhHHHHHHHHhhCCceEEEcCC-CCHHHHHHHHHhcCccEEE
Q 043601 210 ILTHKNFIASSLMTA-MDQELAGALDYVTLCVLPMFHVFGLSFVVYAQLQKGNCVVSMRK-FDLETALRAIEKYRVTHWW 287 (488)
Q Consensus 210 ~~t~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~l~~~~~t~l~ 287 (488)
.+|...+...+.... .....+..+++++....+-..- +...+++++..|+..+..++ .....+...+++.+++.++
T Consensus 43 ~~ty~~L~~~~~~~a~~L~~~g~~~g~~v~i~~~~~~~--~~~~~lA~~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~i~ 120 (545)
T PRK08162 43 RRTWAETYARCRRLASALARRGIGRGDTVAVLLPNIPA--MVEAHFGVPMAGAVLNTLNTRLDAASIAFMLRHGEAKVLI 120 (545)
T ss_pred EEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchH--HHHHHHHHHHhCcEEeccccccChHHHHHHHHhCCCeEEE
Confidence 478887776522211 1122346778888887766543 33567888999999888854 6789999999999999999
Q ss_pred ecHHHHHHHH
Q 043601 288 VVPPIILALA 297 (488)
Q Consensus 288 ~~p~~~~~l~ 297 (488)
..+.+...+.
T Consensus 121 ~~~~~~~~~~ 130 (545)
T PRK08162 121 VDTEFAEVAR 130 (545)
T ss_pred EccchhhHHH
Confidence 9887765543
No 279
>PRK09224 threonine dehydratase; Reviewed
Probab=25.84 E-value=4.2e+02 Score=26.98 Aligned_cols=91 Identities=15% Similarity=0.062 Sum_probs=57.3
Q ss_pred CceEEEeCCCCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHHcCCeEeecCCCCCHHHHHHH
Q 043601 42 SKSALIDADSGESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQFPICLLGVIAIGGIATTANPVYTVSELSKQ 121 (488)
Q Consensus 42 ~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~ 121 (488)
.++.+-..+...+-||+. .-..+.++....+.+ .+| .+.+..+-......++|.+.|..++.+-|...+......
T Consensus 35 ~~i~lK~E~lqptgSfK~-RgA~n~i~~l~~~~~-~~g---vV~aSaGNha~avA~aa~~lGi~~~IvmP~~tp~~K~~~ 109 (504)
T PRK09224 35 NQVLLKREDLQPVFSFKL-RGAYNKMAQLTEEQL-ARG---VITASAGNHAQGVALSAARLGIKAVIVMPVTTPDIKVDA 109 (504)
T ss_pred CEEEEEecCCCCCCCChH-HHHHHHHHhhhHHhc-CCE---EEEECcCHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHH
Confidence 456665554445557766 323344443222221 222 344556777778888999999876666666666666678
Q ss_pred HhhcCCeEEEEccccH
Q 043601 122 VKDSSPKLVVTVPELW 137 (488)
Q Consensus 122 l~~~~~~~vi~~~~~~ 137 (488)
++..+++++++...+.
T Consensus 110 ~r~~GA~Vi~~g~~~~ 125 (504)
T PRK09224 110 VRAFGGEVVLHGDSFD 125 (504)
T ss_pred HHhCCCEEEEECCCHH
Confidence 8999999999976543
No 280
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=25.74 E-value=5e+02 Score=26.67 Aligned_cols=85 Identities=16% Similarity=0.029 Sum_probs=60.0
Q ss_pred hhccHHHHHHhhHHh-hhhhhcCCCCcEEEEecchhhHHhHHHHHHHHhhCCceEEEcCC-CCHHHHHHHHHhcCccEEE
Q 043601 210 ILTHKNFIASSLMTA-MDQELAGALDYVTLCVLPMFHVFGLSFVVYAQLQKGNCVVSMRK-FDLETALRAIEKYRVTHWW 287 (488)
Q Consensus 210 ~~t~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~l~~~~~t~l~ 287 (488)
.+|...+...+.... .....+..+++++....+.... +...+++++..|+..+..++ ...+.+...+++.++..++
T Consensus 57 ~~Ty~ql~~~~~~~A~~L~~~gi~~gd~V~l~~~n~~~--~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii 134 (573)
T PRK05605 57 TTTYAELGKQVRRAAAGLRALGVRPGDRVAIVLPNCPQ--HIVAFYAVLRLGAVVVEHNPLYTAHELEHPFEDHGARVAI 134 (573)
T ss_pred cccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHH--HHHHHHHHHhcCcEEeecCcCCCHHHHHHHHhccCCcEEE
Confidence 367787766522211 1123346778888887766543 23667888999999998854 7889999999999999999
Q ss_pred ecHHHHHHH
Q 043601 288 VVPPIILAL 296 (488)
Q Consensus 288 ~~p~~~~~l 296 (488)
........+
T Consensus 135 ~~~~~~~~~ 143 (573)
T PRK05605 135 VWDKVAPTV 143 (573)
T ss_pred echhhHHHH
Confidence 877765544
No 281
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=25.35 E-value=6.5e+02 Score=26.30 Aligned_cols=97 Identities=15% Similarity=0.066 Sum_probs=65.3
Q ss_pred CCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHH-hhhhhhcCCCCcEEEEecchhhHHhHHHHHHHHhhCCceEEEcC
Q 043601 189 KQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMT-AMDQELAGALDYVTLCVLPMFHVFGLSFVVYAQLQKGNCVVSMR 267 (488)
Q Consensus 189 ~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~~ 267 (488)
.++.+|++.. +..+|. .-.+|...|...+... ......+..++|++...+|..--. ...+++++..|+..+.+.
T Consensus 65 ~p~~~Al~~~-~~~~~~--~~~~Ty~eL~~~v~~lA~~L~~~Gv~~Gd~V~i~~~n~~e~--v~~~lA~~~~Gav~vpl~ 139 (628)
T TIGR02316 65 RGEQLALVTV-SSETGQ--ERTLTYRQLHREVNVFASALRALGVGRGDRVLIYMPMIAEA--VFAMLACARIGAIHSVVF 139 (628)
T ss_pred CCCCeEEEEE-cCCCCc--eEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH--HHHHHHHHHhCCEEEecC
Confidence 3456676543 222222 2247888887653221 122234578899998888775432 356788899999988774
Q ss_pred -CCCHHHHHHHHHhcCccEEEecH
Q 043601 268 -KFDLETALRAIEKYRVTHWWVVP 290 (488)
Q Consensus 268 -~~~~~~~~~~l~~~~~t~l~~~p 290 (488)
.+....+...+++.++..+++..
T Consensus 140 ~~~~~~~l~~~l~~~~~~~li~~~ 163 (628)
T TIGR02316 140 GGFASHSLALRIDDATPKLIVSAD 163 (628)
T ss_pred CCCCHHHHHHHHHhcCceEEEECC
Confidence 47889999999999999998864
No 282
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=25.24 E-value=5.9e+02 Score=25.97 Aligned_cols=97 Identities=13% Similarity=0.066 Sum_probs=65.3
Q ss_pred CCCceEEEeCCCC-------cceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcch-HHHHHHHHHcCCeEeecCC
Q 043601 40 YGSKSALIDADSG-------ESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQF-PICLLGVIAIGGIATTANP 111 (488)
Q Consensus 40 ~p~~~a~~~~~~~-------~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~-~~~~lA~~~~G~~~v~l~~ 111 (488)
.++.+|.+-..+| ..+|++.+....... ....++++++++...+|-...+ +..+++.+..|+.+++.+
T Consensus 178 ~~~~~a~il~TSGTTG~PK~V~~t~~~~~~~~~~~---~~~~~~~~~~~~l~~~pl~~~~~~~~~~~~l~~G~~~~~~~- 253 (542)
T PRK06155 178 QPGDTAAILYTSGTTGPSKGVCCPHAQFYWWGRNS---AEDLEIGADDVLYTTLPLFHTNALNAFFQALLAGATYVLEP- 253 (542)
T ss_pred CCCCeEEEEECCCCCCCCcEEEEEHHHHHHHHHHH---HHhcCCCCCCEEEEecCHHHHHHHHHHHHHHHcCceEEeeC-
Confidence 4566776532212 457888876544333 3445788999988877754332 234578888898877654
Q ss_pred CCCHHHHHHHHhhcCCeEEEEccccHHHH
Q 043601 112 VYTVSELSKQVKDSSPKLVVTVPELWERV 140 (488)
Q Consensus 112 ~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 140 (488)
..+.+.+...+++.++..+.........+
T Consensus 254 ~~~~~~~~~~l~~~~~t~~~~~p~~~~~l 282 (542)
T PRK06155 254 RFSASGFWPAVRRHGATVTYLLGAMVSIL 282 (542)
T ss_pred CCCHHHHHHHHHHhCCcEEEchHHHHHHH
Confidence 56788999999999999988776655444
No 283
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=25.23 E-value=7e+02 Score=25.35 Aligned_cols=79 Identities=15% Similarity=0.123 Sum_probs=54.9
Q ss_pred cceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcc--hHHHHHHHHHcCCeEeecCCCCCHHHHHHHHhhcCCeEE
Q 043601 53 ESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQ--FPICLLGVIAIGGIATTANPVYTVSELSKQVKDSSPKLV 130 (488)
Q Consensus 53 ~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~--~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~v 130 (488)
..+|++.+...+.. .....++++++++....|-... ++..+++.+..|+..+... ..+...+...++..++.++
T Consensus 205 v~~t~~~l~~~~~~---~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~g~~~~~~~-~~~~~~~~~~i~~~~~t~~ 280 (547)
T PRK06087 205 VMLTHNNILASERA---YCARLNLTWQDVFMMPAPLGHATGFLHGVTAPFLIGARSVLLD-IFTPDACLALLEQQRCTCM 280 (547)
T ss_pred EEEecHHHHHHHHH---HHHhcCCCCCCeEEEecchHHHHHHHHHHHHHHhcCCEEEecC-CCCHHHHHHHHHHcCCCEE
Confidence 35788887655433 3344578899988877765433 3456777788898888765 4567778888899999888
Q ss_pred EEccc
Q 043601 131 VTVPE 135 (488)
Q Consensus 131 i~~~~ 135 (488)
+....
T Consensus 281 ~~~~~ 285 (547)
T PRK06087 281 LGATP 285 (547)
T ss_pred eccHH
Confidence 76433
No 284
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=24.99 E-value=2.6e+02 Score=28.06 Aligned_cols=58 Identities=17% Similarity=0.130 Sum_probs=43.2
Q ss_pred hcCCCCcEEEEecchhhHHhHHHHHHHHhhCCceEEEcC----CCCHHHHHHHHHhcCccEEEecHH
Q 043601 229 LAGALDYVTLCVLPMFHVFGLSFVVYAQLQKGNCVVSMR----KFDLETALRAIEKYRVTHWWVVPP 291 (488)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~~----~~~~~~~~~~l~~~~~t~l~~~p~ 291 (488)
....++|.++.--|-|+..-- . .-..|..++.++ +.+++.+-+.++++++..++.+|+
T Consensus 174 ~l~~pGd~v~vE~PtY~~~~~---~--~~~~g~~~~~vp~d~~G~~~e~le~~~~~~~~k~~y~~P~ 235 (459)
T COG1167 174 LLLDPGDTVLVEDPTYPGALQ---A--LEALGARVIPVPVDEDGIDPEALEEALAQWKPKAVYVTPT 235 (459)
T ss_pred HhCCCCCEEEEcCCCcHHHHH---H--HHHcCCcEEecCCCCCCCCHHHHHHHHhhcCCcEEEECCC
Confidence 335689999998888875422 2 233477777663 478999999999999999999994
No 285
>PF02680 DUF211: Uncharacterized ArCR, COG1888; InterPro: IPR003831 This entry describes proteins of unknown function.; PDB: 3BPD_I 2RAQ_F 2X3D_E.
Probab=24.92 E-value=2e+02 Score=21.40 Aligned_cols=59 Identities=8% Similarity=0.089 Sum_probs=39.8
Q ss_pred cceeeCcEEe-eHhHHHhcCCCeeeeEEEeecCCCCCceEEEEEEeCCCCCCCHHHHHHHHHh
Q 043601 423 ELIKCNGFQV-ELEGVLVSHPEILDAVVIPFPDPEAGEVPIAYVVRSPNSSLTKEDVQKFVAN 484 (488)
Q Consensus 423 d~i~~~G~~v-~ie~~l~~~~~v~~~~v~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~~~~~ 484 (488)
|+.|..+-.+ ++...|.++++|..+-+....-....+.+...| +|..++.+++++.+.+
T Consensus 10 DVlKP~~p~i~e~A~~l~~~~gV~gVnitv~EvD~ete~lkiti---EG~~id~d~i~~~Ie~ 69 (95)
T PF02680_consen 10 DVLKPHEPSIVELAKALSELEGVDGVNITVVEVDVETENLKITI---EGDDIDFDEIKEAIEE 69 (95)
T ss_dssp EEEEESSS-HHHHHHHHHTSTTEEEEEEEEEEE-SSEEEEEEEE---EESSE-HHHHHHHHHH
T ss_pred EeecCCCCCHHHHHHHHHhCCCcceEEEEEEEeeccccEEEEEE---EeCCCCHHHHHHHHHH
Confidence 6677777777 999999999999988776654333333343333 3456889999988765
No 286
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=24.77 E-value=5.5e+02 Score=27.48 Aligned_cols=103 Identities=16% Similarity=0.103 Sum_probs=66.0
Q ss_pred CCCCCCCCCCCHHHHHhhccccCC-CceEEEeCCCCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHH
Q 043601 18 ALVLPQDPNLSMVHFLFRNSASYG-SKSALIDADSGESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQFPICL 96 (488)
Q Consensus 18 ~~~~~~~~~~~l~~~l~~~a~~~p-~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~ 96 (488)
.++--..|.-.+.+.=...|+.+. ++..++.+ |.+. +++. ..+ . -+++||.|. +-.||--.+..
T Consensus 186 ~LddLl~~~G~i~eAe~~AA~~fgAd~tyfvvN--GTS~--------~n~a-v~~-a-~~~~Gd~VL-vdRN~HKSv~h- 250 (714)
T PRK15400 186 ELGSLLDHSGPHKEAEEYIARVFNADRSYMVTN--GTST--------ANKI-VGM-Y-SAPAGSTVL-IDRNCHKSLTH- 250 (714)
T ss_pred CCCCCCCCChHHHHHHHHHHHHhCCCcEEEEeC--chHH--------HHHH-HHH-H-hcCCCCEEE-eecccHHHHHH-
Confidence 333334555667777777777665 67777776 5442 1221 111 1 257899665 58888888666
Q ss_pred HHHHHcCCeEeecCCCC---------C-----HHHHHHHHhhc-CCe----EEEEcccc
Q 043601 97 LGVIAIGGIATTANPVY---------T-----VSELSKQVKDS-SPK----LVVTVPEL 136 (488)
Q Consensus 97 lA~~~~G~~~v~l~~~~---------~-----~~~l~~~l~~~-~~~----~vi~~~~~ 136 (488)
|+..+|+.+|-+.|.. + .+.++..++.. +++ ++|+.+.+
T Consensus 251 -aLilsga~PVYl~P~rn~~Gi~g~I~~~~~~~e~i~~~i~~~p~ak~p~~~vit~pTY 308 (714)
T PRK15400 251 -LMMMSDVTPIYFRPTRNAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNSTY 308 (714)
T ss_pred -HHHHcCCeEEEecccccccCCccCCCccccCHHHHHHHHHhCccccCccEEEEECCCC
Confidence 9999999999998764 3 57777777654 334 66666543
No 287
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=24.73 E-value=3.6e+02 Score=28.41 Aligned_cols=80 Identities=14% Similarity=0.024 Sum_probs=58.2
Q ss_pred hhccHHHHHHhhHHh-hhhhhcCCCCcEEEEecchhhHHhHHHHHHHHhhCCceEEEcC-CCCHHHHHHHHHhcCccEEE
Q 043601 210 ILTHKNFIASSLMTA-MDQELAGALDYVTLCVLPMFHVFGLSFVVYAQLQKGNCVVSMR-KFDLETALRAIEKYRVTHWW 287 (488)
Q Consensus 210 ~~t~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~l~~~~~t~l~ 287 (488)
.+|...+...+.... .....+..++|++...+|..--. ...+++++..|+..+.+. .+.++.+...+++.++..++
T Consensus 114 ~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~~n~~e~--~~~~lA~~~~Gav~vp~~~~~~~~~l~~~l~~~~~k~li 191 (652)
T TIGR01217 114 PVTWAELRRQVASLAAALRALGVRPGDRVSGYLPNIPQA--VVAMLATASVGAIWSSCSPDFGARGVLDRFQQIEPKLLF 191 (652)
T ss_pred EEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH--HHHHHHHHHhCeEEEecCCCCCHHHHHHHHHhcCCcEEE
Confidence 578888776532211 12234578899999988776433 256788899999988885 47889999999999999998
Q ss_pred ecHH
Q 043601 288 VVPP 291 (488)
Q Consensus 288 ~~p~ 291 (488)
+...
T Consensus 192 ~~~~ 195 (652)
T TIGR01217 192 TVDG 195 (652)
T ss_pred Eccc
Confidence 7653
No 288
>COG2885 OmpA Outer membrane protein and related peptidoglycan-associated (lipo)proteins [Cell envelope biogenesis, outer membrane]
Probab=24.65 E-value=2.1e+02 Score=24.40 Aligned_cols=58 Identities=12% Similarity=0.064 Sum_probs=39.5
Q ss_pred CCHHHHHhhccccCCCceEEEeCCCC--cceeHHH--HHHHHHHHHHHHHHcCCCCCCEEEEE
Q 043601 27 LSMVHFLFRNSASYGSKSALIDADSG--ESLTFSQ--FKSIVIKVSHGFRHLGVTKHDVVLIF 85 (488)
Q Consensus 27 ~~l~~~l~~~a~~~p~~~a~~~~~~~--~~~Ty~e--l~~~~~~la~~L~~~g~~~g~~V~i~ 85 (488)
....+.+.+..+++|.....+.+..+ .+=.|.+ =.++++.++.+|...|+.++ +|.+.
T Consensus 99 ~~~L~~~a~~L~~~p~~~i~V~GHTD~~Gs~~yN~~LS~rRA~aV~~~L~~~Gv~~~-~i~~~ 160 (190)
T COG2885 99 QATLDELAKYLKKNPITRILVEGHTDSTGSDEYNQALSERRAEAVADYLVSQGVVAD-RISTV 160 (190)
T ss_pred HHHHHHHHHHHHhCCCcEEEEEecCCCCCCHHHhHHHHHHHHHHHHHHHHHcCCCcc-cEEEE
Confidence 34556666777899987777765333 2334443 35679999999999998777 55553
No 289
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=24.64 E-value=5.6e+02 Score=27.05 Aligned_cols=86 Identities=12% Similarity=-0.048 Sum_probs=61.2
Q ss_pred hhccHHHHHHhhHHh-hhhhhcCCCCcEEEEecchhhHHhHHHHHHHHhhCCceEEEcCC-CCHHHHHHHHHhcCccEEE
Q 043601 210 ILTHKNFIASSLMTA-MDQELAGALDYVTLCVLPMFHVFGLSFVVYAQLQKGNCVVSMRK-FDLETALRAIEKYRVTHWW 287 (488)
Q Consensus 210 ~~t~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~l~~~~~t~l~ 287 (488)
.+|...+...+.... .....+..++|++...++-..- +....++++..|+..+.+.+ ...+++...+++.+++.++
T Consensus 77 ~~Ty~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e--~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~v~ 154 (660)
T PLN02861 77 WLTYKEVYDAAIRIGSAIRSRGVNPGDRCGIYGSNCPE--WIIAMEACNSQGITYVPLYDTLGANAVEFIINHAEVSIAF 154 (660)
T ss_pred EEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHH--HHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHcCCCCEEE
Confidence 478888876632221 1222356788888777765433 23567888999999998854 6789999999999999999
Q ss_pred ecHHHHHHHH
Q 043601 288 VVPPIILALA 297 (488)
Q Consensus 288 ~~p~~~~~l~ 297 (488)
+....+..+.
T Consensus 155 ~~~~~~~~~~ 164 (660)
T PLN02861 155 VQESKISSIL 164 (660)
T ss_pred ECHHHHHHHH
Confidence 9877665554
No 290
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=24.52 E-value=5.3e+02 Score=30.26 Aligned_cols=97 Identities=11% Similarity=-0.024 Sum_probs=63.3
Q ss_pred CCCCEEEEEcccCCCCCCchhhhccHHHHHHhhHHhhhhh---hcCCCCcEEEEecchhhHHhHHHHHHHHhhCCceEEE
Q 043601 189 KQTDTAALLYSSGTTGVGKGAILTHKNFIASSLMTAMDQE---LAGALDYVTLCVLPMFHVFGLSFVVYAQLQKGNCVVS 265 (488)
Q Consensus 189 ~~~~~a~i~~TSGtTG~pK~v~~t~~~l~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~ 265 (488)
.++.+|++...+...+......+|+..+...+.. .... .+..+++++...++-...+ ...+++++..|+..+.
T Consensus 249 ~pd~~A~~~~~~~~~~~~~~~~lTY~eL~~~~~~--lA~~L~~~gv~~g~~V~i~~~~~~~~--i~~~lA~l~~G~~~vp 324 (1389)
T TIGR03443 249 HPDRTCVVETPSFLDPSSKTRSFTYKQINEASNI--LAHYLLKTGIKRGDVVMIYAYRGVDL--VVAVMGVLKAGATFSV 324 (1389)
T ss_pred CCCCeEEEeccccccccCCCceeeHHHHHHHHHH--HHHHHHHhCCCCCCEEEEEecCCHHH--HHHHHHHHhhCcEEec
Confidence 4667777653321101111345788888766322 3222 3467788888777665433 3677899999999998
Q ss_pred cCC-CCHHHHHHHHHhcCccEEEec
Q 043601 266 MRK-FDLETALRAIEKYRVTHWWVV 289 (488)
Q Consensus 266 ~~~-~~~~~~~~~l~~~~~t~l~~~ 289 (488)
+++ ..++++...++..++..++..
T Consensus 325 ldp~~p~~~~~~~l~~~~~~~li~~ 349 (1389)
T TIGR03443 325 IDPAYPPARQTIYLSVAKPRALIVI 349 (1389)
T ss_pred cCCCCcHHHHHHHHHhcCCCEEEEe
Confidence 865 567778888899999888764
No 291
>smart00450 RHOD Rhodanese Homology Domain. An alpha beta fold found duplicated in the Rhodanese protein. The the Cysteine containing enzymatically active version of the domain is also found in the CDC25 class of protein phosphatases and a variety of proteins such as sulfide dehydrogenases and stress proteins such as Senesence specific protein 1 in plants, PspE and GlpE in bacteria and cyanide and arsenate resistance proteins. Inactive versions with a loss of the cysteine are also seen in Dual specificity phosphatases, ubiquitin hydrolases from yeast and in sulfuryltransferases. These are likely to play a role in protein interactions.
Probab=24.22 E-value=2.4e+02 Score=20.17 Aligned_cols=40 Identities=13% Similarity=0.182 Sum_probs=30.3
Q ss_pred HHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHHcCCe
Q 043601 66 KVSHGFRHLGVTKHDVVLIFAPNSIQFPICLLGVIAIGGI 105 (488)
Q Consensus 66 ~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~ 105 (488)
.+...+...++.+++.|.++|.++.....+...+...|..
T Consensus 43 ~~~~~~~~~~~~~~~~iv~~c~~g~~a~~~~~~l~~~G~~ 82 (100)
T smart00450 43 EFEELLKRLGLDKDKPVVVYCRSGNRSAKAAWLLRELGFK 82 (100)
T ss_pred HHHHHHHHcCCCCCCeEEEEeCCCcHHHHHHHHHHHcCCC
Confidence 4455556667888999999998888877777777778865
No 292
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=24.18 E-value=3.8e+02 Score=21.54 Aligned_cols=93 Identities=14% Similarity=0.052 Sum_probs=51.8
Q ss_pred hHHhHHHHHHHHhhCCceEEEcCC-CCHHHHHHHHHhcCccEEEecH------HHHHHHHhcCCccCCCCCCCccEEEEc
Q 043601 245 HVFGLSFVVYAQLQKGNCVVSMRK-FDLETALRAIEKYRVTHWWVVP------PIILALAKNVSLVKKFDLSSLKGIGSG 317 (488)
Q Consensus 245 ~~~~~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~l~~~~~t~l~~~p------~~~~~l~~~~~~~~~~~l~~lr~v~~~ 317 (488)
|..|.-......-..|-.++.... .+++++++...+++++.+..+. ..+..+.+. .....+... .++.|
T Consensus 14 HdiGk~iv~~~l~~~GfeVi~LG~~v~~e~~v~aa~~~~adiVglS~l~~~~~~~~~~~~~~---l~~~gl~~~-~vivG 89 (134)
T TIGR01501 14 HAVGNKILDHAFTNAGFNVVNLGVLSPQEEFIKAAIETKADAILVSSLYGHGEIDCKGLRQK---CDEAGLEGI-LLYVG 89 (134)
T ss_pred hhHhHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEecccccCHHHHHHHHHH---HHHCCCCCC-EEEec
Confidence 444442223333456777777754 6789999999999999876543 123334333 112233333 37788
Q ss_pred cCC-CcHHHHH----HHHhhCCCCeEEeccCcc
Q 043601 318 AAP-LRKELVE----ECSKNLPTVTVFQGYGMT 345 (488)
Q Consensus 318 G~~-l~~~~~~----~~~~~~~~~~i~~~YG~t 345 (488)
|.+ ++++-.+ ++++. | +-..||..
T Consensus 90 G~~vi~~~d~~~~~~~l~~~-G---v~~vF~pg 118 (134)
T TIGR01501 90 GNLVVGKQDFPDVEKRFKEM-G---FDRVFAPG 118 (134)
T ss_pred CCcCcChhhhHHHHHHHHHc-C---CCEEECcC
Confidence 864 4554443 35443 2 34456644
No 293
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]
Probab=24.05 E-value=6e+02 Score=26.65 Aligned_cols=101 Identities=23% Similarity=0.329 Sum_probs=71.0
Q ss_pred cccCCCceEEE-eC------CCCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHH-HHHHHcCCeEee
Q 043601 37 SASYGSKSALI-DA------DSGESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQFPICL-LGVIAIGGIATT 108 (488)
Q Consensus 37 a~~~p~~~a~~-~~------~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~-lA~~~~G~~~v~ 108 (488)
....|+..|.+ +. ..|--+||+.+...+..+...+. -++++|++.-++|-..-+=-++ .++...|.+.+.
T Consensus 186 ~~~~~dDlatiiYTSGTTG~PKGVmLth~N~~~~v~~~~~~~~--~~~~~d~~LsfLPlaHi~Er~~~~~~~~~~g~~~~ 263 (613)
T COG1022 186 APPKPDDLATIIYTSGTTGTPKGVMLTHRNLLAQVAGIDEVLP--PIGPGDRVLSFLPLAHIFERAFEGGLALYGGVTVL 263 (613)
T ss_pred CCCCccceEEEEEcCCCCCCCceEEEehHHHHHHHHHHHhhCC--CCCCCcEEEEeCcHHHHHHHHHHHHHHhhcceEEE
Confidence 34568888864 22 22367999999999988887776 4789999999999664333332 444444544444
Q ss_pred cCCCCCHHHHHHHHhhcCCeEEEEccccHHHHh
Q 043601 109 ANPVYTVSELSKQVKDSSPKLVVTVPELWERVK 141 (488)
Q Consensus 109 l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~ 141 (488)
. ..+...+..-++..+|.+++.-+...+.+.
T Consensus 264 ~--~~~~~~~~~dl~~~rPt~m~~VPRvwE~i~ 294 (613)
T COG1022 264 F--KEDPRTLLEDLKEVRPTVMIGVPRVWEKVY 294 (613)
T ss_pred e--cCCHHHHHHHHHHhCCeEEeechHHHHHHH
Confidence 3 346778999999999999998776665553
No 294
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=23.91 E-value=2.7e+02 Score=27.41 Aligned_cols=104 Identities=19% Similarity=0.238 Sum_probs=64.7
Q ss_pred CCCCCCCCCCCCHHHHHhhccccCC-CceEEEeCCCCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHH
Q 043601 17 PALVLPQDPNLSMVHFLFRNSASYG-SKSALIDADSGESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQFPIC 95 (488)
Q Consensus 17 ~~~~~~~~~~~~l~~~l~~~a~~~p-~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~ 95 (488)
+.++-..+|.-.+.+.-+..|+.+. ++.++..+ |.+.. ..+..+.- +++||.|.+ -.|+-..+..
T Consensus 56 ~~lD~L~~p~G~I~eAe~~aA~~fGAd~t~flvn--GsT~g---------~~a~i~a~--~~~gd~VLv-~RN~HkSv~~ 121 (417)
T PF01276_consen 56 PGLDDLHDPEGIIKEAEELAARAFGADKTFFLVN--GSTSG---------NQAMIMAL--CRPGDKVLV-DRNCHKSVYN 121 (417)
T ss_dssp TTCBBTTTTBTHHHHHHHHHHHHHTESEEEEESS--HHHHH---------HHHHHHHH--TTTTCEEEE-ETT--HHHHH
T ss_pred cccCcccCCccHHHHHHHHHHHhcCCCeEEEEec--CchHH---------HHHHHHHh--cCCCCEEEE-cCCcHHHHHH
Confidence 5555556677788888888888887 55555555 43311 11111111 468998655 7778777766
Q ss_pred HHHHHHcCCeEeecCCC---------CCH-----HHHHHHHhhcC-Ce----EEEEcccc
Q 043601 96 LLGVIAIGGIATTANPV---------YTV-----SELSKQVKDSS-PK----LVVTVPEL 136 (488)
Q Consensus 96 ~lA~~~~G~~~v~l~~~---------~~~-----~~l~~~l~~~~-~~----~vi~~~~~ 136 (488)
|+...|+.++-++|. .+. +.+...++... ++ ++|+.+.+
T Consensus 122 --alil~ga~Pvyi~p~~~~~gi~~~i~~~~~~~~~i~~~l~~~p~~k~~~~vvlt~PTY 179 (417)
T PF01276_consen 122 --ALILSGAIPVYIPPEDNEYGIIGGISPDEFNEEDIEEALKEHPDAKAPRLVVLTSPTY 179 (417)
T ss_dssp --HHHHHTEEEEEEEEEE-TTS-BEEB-GGGGSHHHHHHHHHHCTTCHCESEEEEESS-T
T ss_pred --HHHHcCCeEEEecCCccccCCccCCChhhhhHHHHHHHHHhCccccCceEEEEeCCCC
Confidence 999999999988774 223 77888887654 33 45555543
No 295
>PRK06382 threonine dehydratase; Provisional
Probab=23.89 E-value=4.3e+02 Score=25.95 Aligned_cols=90 Identities=14% Similarity=0.085 Sum_probs=53.3
Q ss_pred CceEEEeCCCCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHHcCCeEeecCCCCCHHHHHHH
Q 043601 42 SKSALIDADSGESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQFPICLLGVIAIGGIATTANPVYTVSELSKQ 121 (488)
Q Consensus 42 ~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~ 121 (488)
.++.+-....+.+=||+.=-. .+.+. .+.+.+.++| .+.+..+-.-....++|...|..+..+-|...+......
T Consensus 40 ~~v~~K~E~~nptGSfK~Rga-~~~i~-~~~~~~~~~g---vv~aSsGN~g~a~A~aa~~~G~~~~ivmp~~~~~~k~~~ 114 (406)
T PRK06382 40 GDIYFKLENFQKTGSFKSRGA-VFKFS-KLSEDELRNG---VITASAGNHAQGVAYAASINGIDAKIVMPEYTIPQKVNA 114 (406)
T ss_pred CEEEEEecCCCCCCCCHHHHH-HHHHH-hcchhccCCe---EEEECCCHHHHHHHHHHHHcCCCEEEEEcCCCHHHHHHH
Confidence 356665543334444443211 22222 2323333344 334455666667778888999876666666666666777
Q ss_pred HhhcCCeEEEEcccc
Q 043601 122 VKDSSPKLVVTVPEL 136 (488)
Q Consensus 122 l~~~~~~~vi~~~~~ 136 (488)
++..+++++++....
T Consensus 115 ~~~~GA~Vv~~~~~~ 129 (406)
T PRK06382 115 VEAYGAHVILTGRDY 129 (406)
T ss_pred HHHcCCEEEEECCCH
Confidence 999999999987643
No 296
>PRK09177 xanthine-guanine phosphoribosyltransferase; Validated
Probab=23.81 E-value=2.6e+02 Score=23.11 Aligned_cols=41 Identities=5% Similarity=0.061 Sum_probs=28.3
Q ss_pred cceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHH
Q 043601 53 ESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQFPIC 95 (488)
Q Consensus 53 ~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~ 95 (488)
.-+||.|+.+.++++|..+.+.| +-+.|.-++..+.-+...
T Consensus 8 ~~is~~~i~~~i~~la~~I~~~~--~~d~vvgv~~GG~~fa~~ 48 (156)
T PRK09177 8 FPVSWDQLHRDARALAWRLLPAG--QWKGIIAVTRGGLVPAAI 48 (156)
T ss_pred EEcCHHHHHHHHHHHHHHHHhhC--CCCEEEEEecCCeehHHH
Confidence 35899999999999999998764 235554445544433333
No 297
>PLN02238 hypoxanthine phosphoribosyltransferase
Probab=23.67 E-value=2.1e+02 Score=24.59 Aligned_cols=22 Identities=9% Similarity=-0.035 Sum_probs=20.0
Q ss_pred cceeHHHHHHHHHHHHHHHHHc
Q 043601 53 ESLTFSQFKSIVIKVSHGFRHL 74 (488)
Q Consensus 53 ~~~Ty~el~~~~~~la~~L~~~ 74 (488)
.-+||.|+.+++.++|..+.+.
T Consensus 10 ~lis~~~I~~~i~~lA~~I~~~ 31 (189)
T PLN02238 10 VLWTAEDISARVAELAAQIASD 31 (189)
T ss_pred EEcCHHHHHHHHHHHHHHHHHH
Confidence 4689999999999999999875
No 298
>PRK07867 acyl-CoA synthetase; Validated
Probab=23.49 E-value=6.2e+02 Score=25.73 Aligned_cols=85 Identities=14% Similarity=-0.005 Sum_probs=56.8
Q ss_pred hhccHHHHHHhhHHhhhhh--hcCCCCcEEEEecchhhHHhHHHHHHHHhhCCceEEEcCC-CCHHHHHHHHHhcCccEE
Q 043601 210 ILTHKNFIASSLMTAMDQE--LAGALDYVTLCVLPMFHVFGLSFVVYAQLQKGNCVVSMRK-FDLETALRAIEKYRVTHW 286 (488)
Q Consensus 210 ~~t~~~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~l~~~~~t~l 286 (488)
.+|...+...+........ ....+++.+....+-.. .+...+++++..|+.++.++. ..++.+...+++.++..+
T Consensus 28 ~~Ty~el~~~v~~lA~~L~~~~~~~~~~~V~i~~~n~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~l 105 (529)
T PRK07867 28 FTSWREHIRGSAARAAALRARLDPTRPPHVGVLLDNTP--EFSLLLGAAALSGIVPVGLNPTRRGAALARDIAHADCQLV 105 (529)
T ss_pred EEeHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCCH--HHHHHHHHHHhcCCEEEEecCCCChHHHHHHHHhCCCeEE
Confidence 4677777765322211111 12455666666655432 333667889999999998754 678999999999999999
Q ss_pred EecHHHHHHH
Q 043601 287 WVVPPIILAL 296 (488)
Q Consensus 287 ~~~p~~~~~l 296 (488)
+........+
T Consensus 106 i~~~~~~~~~ 115 (529)
T PRK07867 106 LTESAHAELL 115 (529)
T ss_pred EECHhHHHHH
Confidence 9988766543
No 299
>TIGR01127 ilvA_1Cterm threonine dehydratase, medium form. A form of threonine dehydratase with two copies of the C-terminal domain Pfam:PF00585 is described by TIGR01124. This model describes a phylogenetically distinct form with a single copy of pfam00585. This form branches with the catabolic threonine dehydratase of E. coli; many members are designated as catabolic for this reason. However, the catabolic form lacks any pfam00585 domain. Many members of this model are found in species with other Ile biosynthetic enzymes.
Probab=23.32 E-value=5.3e+02 Score=24.94 Aligned_cols=89 Identities=11% Similarity=0.051 Sum_probs=55.6
Q ss_pred CceEEEeCCCCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHHcCCeEeecCCCCCHHHHHHH
Q 043601 42 SKSALIDADSGESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQFPICLLGVIAIGGIATTANPVYTVSELSKQ 121 (488)
Q Consensus 42 ~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~ 121 (488)
.++.+-....+.+-||+. .-..+.+.. +.+.|..+ -.+.+..+-.-....++|...|..+..+-|...+......
T Consensus 15 ~~i~~K~E~~~ptgS~K~-R~a~~~i~~-~~~~~~~~---~vv~aSsGN~g~alA~~a~~~G~~~~iv~p~~~~~~k~~~ 89 (380)
T TIGR01127 15 SEVYLKLENLQKTGSFKI-RGALNKIAN-LSEDQRQR---GVVAASAGNHAQGVAYAAKKFGIKAVIVMPESAPPSKVKA 89 (380)
T ss_pred CeEEEEecCCCCCCCcHH-HHHHHHHHh-cchhccCC---EEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCCcHHHHHH
Confidence 356665543334555654 222223333 33333322 2445555667778888899999877766676666677888
Q ss_pred HhhcCCeEEEEccc
Q 043601 122 VKDSSPKLVVTVPE 135 (488)
Q Consensus 122 l~~~~~~~vi~~~~ 135 (488)
++..++++++++..
T Consensus 90 ~~~~GA~V~~~~~~ 103 (380)
T TIGR01127 90 TKSYGAEVILHGDD 103 (380)
T ss_pred HHHCCCEEEEECCC
Confidence 99999999998754
No 300
>PF00156 Pribosyltran: Phosphoribosyl transferase domain; InterPro: IPR000836 The name PRT comes from phosphoribosyltransferase (PRTase) enzymes, which carry out phosphoryl transfer reactions on 5-phosphoribosyl-alpha1-pyrophosphate PRPP, an activated form of ribose-5-phosphate. Members of Phosphoribosyltransferase (PRT) are catalytic and are regulatory proteins involved in nucleotide synthesis and salvage []. This includes a range of diverse phosphoribosyl transferase enzymes including adenine phosphoribosyltransferase (2.4.2.7 from EC); hypoxanthine-guanine-xanthine phosphoribosyltransferase; hypoxanthine phosphoribosyltransferase (2.4.2.8 from EC); ribose-phosphate pyrophosphokinase (2.7.6.1 from EC); amidophosphoribosyltransferase (2.4.2.14 from EC); orotate phosphoribosyltransferase (2.4.2.10 from EC);uracil phosphoribosyltransferase (2.4.2.9 from EC); and xanthine-guanine phosphoribosyltransferase (2.4.2.22 from EC). Not all PRT proteins are enzymes. For example, in some bacteria PRT proteins regulate the expression of purine and pyrimidine synthetic genes. Members of PRT are defined by the protein fold and by a short 13-residue sequence motif, The motif consists of four hydrophobic amino acids, two acidic amino acids and seven amino acids of variable character, usually including glycine and threonine. The motif has been predicted to be a PRPP-binding site in advance of structural information [, ]. Apart of this motif, different PRT proteins have a low level of sequence identity, less than 15%. The PRT sequence motif is only found in PRTases from the nucleotide synthesis and salvage pathways. Other PRTases, from the tryptophan, histidine and nicotinamide synthetic and salvage pathways, lack the PRT sequence motif and appear to be unrelated to each other and unrelated to the PRT family.; GO: 0009116 nucleoside metabolic process; PDB: 2JBH_A 1Y0B_D 2FXV_B 1GPH_1 1AO0_D 1ORO_B 1VCH_C 2WNS_A 2PRZ_B 2PS1_A ....
Probab=23.11 E-value=2.3e+02 Score=21.81 Aligned_cols=27 Identities=11% Similarity=0.177 Sum_probs=23.0
Q ss_pred ceeHHHHHHHHHHHHHHHHHcCCCCCC
Q 043601 54 SLTFSQFKSIVIKVSHGFRHLGVTKHD 80 (488)
Q Consensus 54 ~~Ty~el~~~~~~la~~L~~~g~~~g~ 80 (488)
.++|.++.+.++.+|..|.+.+.....
T Consensus 4 ~~~~~~~~~~~~~la~~i~~~~~~~~~ 30 (125)
T PF00156_consen 4 ILSPEQIEALAERLAEQIKESGFDFDV 30 (125)
T ss_dssp EEBHHHHHHHHHHHHHHHHHHTTTSSE
T ss_pred EEcHHHHHHHHHHHHHHHHHhCCCCCE
Confidence 578999999999999999998765444
No 301
>PF09312 SurA_N: SurA N-terminal domain; InterPro: IPR015391 The correct folding of outer membrane proteins in Gram negative bacteria is facilitated by the survival protein SurA []. This entry represents the domain found at the N terminus of the chaperone SurA. It is a helical domain of unknown function. The C terminus of the SurA protein folds back and forms part of this domain also but is not included in the current alignment. ; PDB: 3RGC_B 2PV3_B 1M5Y_A.
Probab=22.83 E-value=1.7e+02 Score=22.77 Aligned_cols=32 Identities=13% Similarity=0.221 Sum_probs=25.0
Q ss_pred CceEEEeCCCCcceeHHHHHHHHHHHHHHHHHcC
Q 043601 42 SKSALIDADSGESLTFSQFKSIVIKVSHGFRHLG 75 (488)
Q Consensus 42 ~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g 75 (488)
|+++.+.+ +..+|+.||..++..+...+...|
T Consensus 2 D~IvAvVn--~eiIt~sel~~~~~~~~~~~~~~~ 33 (118)
T PF09312_consen 2 DRIVAVVN--DEIITQSELEQRLAQLKAQIQQQG 33 (118)
T ss_dssp --EEEEES--SSEEEHHHHHHHHHHHHHHHHTTT
T ss_pred CeEEEEEC--CcCcCHHHHHHHHHHHHHHHHhcC
Confidence 56777776 789999999999998888877654
No 302
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=22.68 E-value=2.1e+02 Score=27.25 Aligned_cols=61 Identities=10% Similarity=0.066 Sum_probs=44.9
Q ss_pred HHHHcCCCCCCEEEEEcCCCcchHHHHHHHHHcCCeEeecCCCCCHHHHHHHHhhcCCeEEEEcc
Q 043601 70 GFRHLGVTKHDVVLIFAPNSIQFPICLLGVIAIGGIATTANPVYTVSELSKQVKDSSPKLVVTVP 134 (488)
Q Consensus 70 ~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~ 134 (488)
.|++.++++|++|+|..--..-.+...+|-.. |+-++.++.+. +-....++.+++.++...
T Consensus 158 alk~~~~~pG~~V~I~G~GGlGh~avQ~Aka~-ga~Via~~~~~---~K~e~a~~lGAd~~i~~~ 218 (339)
T COG1064 158 ALKKANVKPGKWVAVVGAGGLGHMAVQYAKAM-GAEVIAITRSE---EKLELAKKLGADHVINSS 218 (339)
T ss_pred ehhhcCCCCCCEEEEECCcHHHHHHHHHHHHc-CCeEEEEeCCh---HHHHHHHHhCCcEEEEcC
Confidence 34557899999999999888888888887644 47777775432 334567888888888754
No 303
>PF02729 OTCace_N: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; InterPro: IPR006132 This entry contains two related enzymes: Aspartate carbamoyltransferase (2.1.3.2 from EC) (ATCase) catalyzes the conversion of aspartate and carbamoyl phosphate to carbamoylaspartate, the second step in the de novo biosynthesis of pyrimidine nucleotides []. In prokaryotes ATCase consists of two subunits: a catalytic chain (gene pyrB) and a regulatory chain (gene pyrI), while in eukaryotes it is a domain in a multi- functional enzyme (called URA2 in yeast, rudimentary in Drosophila, and CAD in mammals []) that also catalyzes other steps of the biosynthesis of pyrimidines. Ornithine carbamoyltransferase (2.1.3.3 from EC) (OTCase) catalyzes the conversion of ornithine and carbamoyl phosphate to citrulline. In mammals this enzyme participates in the urea cycle [] and is located in the mitochondrial matrix. In prokaryotes and eukaryotic microorganisms it is involved in the biosynthesis of arginine. In some bacterial species it is also involved in the degradation of arginine [] (the arginine deaminase pathway). It has been shown [] that these two enzymes are evolutionary related. The predicted secondary structure of both enzymes are similar and there are some regions of sequence similarities. One of these regions includes three residues which have been shown, by crystallographic studies [], to be implicated in binding the phosphoryl group of carbamoyl phosphate and may also play a role in trimerization of the molecules []. The carboxyl-terminal, aspartate/ornithine-binding domain is is described by IPR006131 from INTERPRO. ; GO: 0016743 carboxyl- or carbamoyltransferase activity, 0006520 cellular amino acid metabolic process; PDB: 1ML4_A 2P2G_D 2I6U_A 2YFK_B 3D6N_B 3SDS_A 3GD5_A 3R7L_B 3R7F_A 3R7D_A ....
Probab=22.63 E-value=4.2e+02 Score=21.47 Aligned_cols=78 Identities=9% Similarity=0.063 Sum_probs=48.7
Q ss_pred HHHHHHHHHHHHHHHHc---CCCCCCEEEEE-cCCCcc-hHHHHHHHHHcCCeEeecCCCC-------CHHHHHHHHhhc
Q 043601 58 SQFKSIVIKVSHGFRHL---GVTKHDVVLIF-APNSIQ-FPICLLGVIAIGGIATTANPVY-------TVSELSKQVKDS 125 (488)
Q Consensus 58 ~el~~~~~~la~~L~~~---g~~~g~~V~i~-~~n~~~-~~~~~lA~~~~G~~~v~l~~~~-------~~~~l~~~l~~~ 125 (488)
..|.+.+..+-....+. ..-+|..|+++ ..+|.. -+-...|+.++|+.++.+++.. +..+....+..+
T Consensus 15 ~~ll~~A~~lk~~~~~~~~~~~l~gk~v~~lF~e~StRTR~SFe~A~~~LGg~~i~~~~~~s~~~k~Esl~Dtar~ls~~ 94 (142)
T PF02729_consen 15 EALLDLAKELKAAPKKGKPSQLLKGKTVALLFFEPSTRTRLSFEAAANRLGGHVIYLDPSTSSLGKGESLEDTARVLSRY 94 (142)
T ss_dssp HHHHHHHHHHHHHHHTTCCTTTTTTCEEEEEESS--HHHHHHHHHHHHHTTCEEEEEETTTSSTTTSSEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhhcCCCcccCCCCEEEEEecCCCchhhhhHHHhhhcceeEEEEECcccccCcCCCCHHHHHHHHHHh
Confidence 34445555555544432 24456777664 455544 4455677899999999888654 357777888888
Q ss_pred CCeEEEEcccc
Q 043601 126 SPKLVVTVPEL 136 (488)
Q Consensus 126 ~~~~vi~~~~~ 136 (488)
++++++-...
T Consensus 95 -~D~iv~R~~~ 104 (142)
T PF02729_consen 95 -VDAIVIRHPS 104 (142)
T ss_dssp -CSEEEEEESS
T ss_pred -hheEEEEecc
Confidence 8888775443
No 304
>PF06564 YhjQ: YhjQ protein; InterPro: IPR017746 The YhjQ protein is encoded immediately upstream of bacterial cellulose synthase (bcs) genes in a broad range of bacteria, including both copies of the bcs locus in Klebsiella pneumoniae, and in several species is clearly part of the bcs operon. It is identified as a probable component of the bacterial cellulose metabolic process not only by gene location, but also by partial phylogenetic profiling, or Haft-Selengut algorithm [], based on a bacterial cellulose biosynthesis genome property profile. Cellulose plays an important role in biofilm formation and structural integrity in some bacteria. Mutants in yhjQ in Escherichia coli, show altered morphology an growth, but the function of YhjQ has not yet been determined.
Probab=22.59 E-value=4.1e+02 Score=23.94 Aligned_cols=81 Identities=15% Similarity=0.101 Sum_probs=55.2
Q ss_pred hhccccCCCceEEEeC-CC--CcceeHHHHHHHHHHHHHHHHHcC-CCCCCEEEEEcCCCcchHHHHHHHHHcCCeEeec
Q 043601 34 FRNSASYGSKSALIDA-DS--GESLTFSQFKSIVIKVSHGFRHLG-VTKHDVVLIFAPNSIQFPICLLGVIAIGGIATTA 109 (488)
Q Consensus 34 ~~~a~~~p~~~a~~~~-~~--~~~~Ty~el~~~~~~la~~L~~~g-~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l 109 (488)
.+.+-+.++.+.|.=. .. .+...+.++...-..+++.|.+.+ ..+.+.|.+-+|..+.- ..--++..+..+.+.+
T Consensus 69 ~~~~~~~~~g~~~LPfG~l~~~~~~~~~~l~~~~~~l~~~l~~l~~~~~~~~iliD~P~g~~~-~~~~al~~aD~vL~V~ 147 (243)
T PF06564_consen 69 QQAAYRYSDGVDFLPFGQLTEAEREAFEQLAQDPQWLARALAALKALGPYDWILIDTPPGPSP-YTRQALAAADLVLVVV 147 (243)
T ss_pred HHHhhccCCCCEEEcCCCCCHHHHHHHHHhhcCHHHHHHHHHHHhccCCCCEEEEeCCCCCcH-HHHHHHHhCCeEEEEe
Confidence 3444566777777632 11 145667777777888899998877 66778899999986543 3334666778888888
Q ss_pred CCCCCH
Q 043601 110 NPVYTV 115 (488)
Q Consensus 110 ~~~~~~ 115 (488)
.|+...
T Consensus 148 ~~Da~s 153 (243)
T PF06564_consen 148 NPDAAS 153 (243)
T ss_pred CCCHHH
Confidence 877643
No 305
>PRK07798 acyl-CoA synthetase; Validated
Probab=22.29 E-value=8e+02 Score=24.61 Aligned_cols=86 Identities=6% Similarity=-0.162 Sum_probs=57.7
Q ss_pred hhccHHHHHHhhHHh-hhhhhcCCCCcEEEEecchhhHHhHHHHHHHHhhCCceEEEcCC-CCHHHHHHHHHhcCccEEE
Q 043601 210 ILTHKNFIASSLMTA-MDQELAGALDYVTLCVLPMFHVFGLSFVVYAQLQKGNCVVSMRK-FDLETALRAIEKYRVTHWW 287 (488)
Q Consensus 210 ~~t~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~l~~~~~t~l~ 287 (488)
.+|...+...+.... .....+..+++++....+-.- .+...+++++..|+..+..+. ...+.+...+++.++..++
T Consensus 28 ~~ty~el~~~~~~la~~L~~~g~~~~~~v~v~~~n~~--~~~~~~~a~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~~ 105 (533)
T PRK07798 28 RLTYAELEERANRLAHYLIAQGLGPGDHVGIYARNRI--EYVEAMLGAFKARAVPVNVNYRYVEDELRYLLDDSDAVALV 105 (533)
T ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCH--HHHHHHHHHHhcCeEEEecCcCCCHHHHHHHHhhcCCCEEE
Confidence 477777765522211 112234567777777664433 333667888999999998854 6788999999999999999
Q ss_pred ecHHHHHHHH
Q 043601 288 VVPPIILALA 297 (488)
Q Consensus 288 ~~p~~~~~l~ 297 (488)
........+.
T Consensus 106 ~~~~~~~~~~ 115 (533)
T PRK07798 106 YEREFAPRVA 115 (533)
T ss_pred EchhhHHHHH
Confidence 8876655543
No 306
>PF07994 NAD_binding_5: Myo-inositol-1-phosphate synthase; InterPro: IPR002587 1L-myo-Inositol-1-phosphate synthase (5.5.1.4 from EC) catalyzes the conversion of D-glucose 6-phosphate to 1L-myo-inositol-1-phosphate, the first committed step in the production of all inositol-containing compounds, including phospholipids, either directly or by salvage. The enzyme exists in a cytoplasmic form in a wide range of plants, animals, and fungi. It has also been detected in several bacteria and a chloroplast form is observed in alga and higher plants. Inositol phosphates play an important role in signal transduction. In Saccharomyces cerevisiae (Baker's yeast), the transcriptional regulation of the INO1 gene has been studied in detail [] and its expression is sensitive to the availability of phospholipid precursors as well as growth phase. The regulation of the structural gene encoding 1L-myo-inositol-1-phosphate synthase has also been analyzed at the transcriptional level in the aquatic angiosperm, Spirodela polyrrhiza (Giant duckweed) and the halophyte, Mesembryanthemum crystallinum (Common ice plant) [].; GO: 0004512 inositol-3-phosphate synthase activity, 0006021 inositol biosynthetic process, 0008654 phospholipid biosynthetic process; PDB: 1GR0_A 1P1K_B 1LA2_B 1RM0_B 1P1I_B 1JKF_A 1P1F_A 1P1J_B 1JKI_B 1P1H_A ....
Probab=22.20 E-value=6.5e+02 Score=23.49 Aligned_cols=70 Identities=11% Similarity=0.112 Sum_probs=47.9
Q ss_pred eHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcc----------------------------hHHHHHHHHHcCCeEe
Q 043601 56 TFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQ----------------------------FPICLLGVIAIGGIAT 107 (488)
Q Consensus 56 Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~----------------------------~~~~~lA~~~~G~~~v 107 (488)
.+.++.+....+..++++.|+. ..|.|.+-++-. ..+..+|+++.|+.++
T Consensus 127 ~~~~~e~~~~DI~~f~~~~~~d--~vVvvn~asTE~~~~~~~~~~~t~~~l~~al~~~~~~~~aS~~YA~AAl~~g~~fv 204 (295)
T PF07994_consen 127 KREQVEQIREDIRDFKKENGLD--RVVVVNVASTERYIPVIPGVHDTLEALEKALDENDPEISASMLYAYAALEAGVPFV 204 (295)
T ss_dssp HHHHHHHHHHHHHHHHHHTT-S--CEEEEE-SSCC-S---CCCCCSSHHHHHHHHHTT-TTHHHHHHHHHHHHHTTEEEE
T ss_pred hHHHHHHHHHHHHHHHHHhCCC--cEEEEECCCCCCCCCCCccccCCHHHHHHHhhcCCCcCChHHHHHHHHHHCCCCeE
Confidence 4556666678888888888763 556665554433 3456788999999999
Q ss_pred ecCCCCCH--HHHHHHHhhcCC
Q 043601 108 TANPVYTV--SELSKQVKDSSP 127 (488)
Q Consensus 108 ~l~~~~~~--~~l~~~l~~~~~ 127 (488)
-.-|.... ..+.++.++.+.
T Consensus 205 N~tP~~~a~~P~l~ela~~~gv 226 (295)
T PF07994_consen 205 NGTPSNIADDPALVELAEEKGV 226 (295)
T ss_dssp E-SSSTTTTSHHHHHHHHHHTE
T ss_pred eccCccccCCHHHHHHHHHcCC
Confidence 88887754 778888877774
No 307
>KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism]
Probab=22.15 E-value=5.5e+02 Score=24.43 Aligned_cols=61 Identities=13% Similarity=-0.015 Sum_probs=48.9
Q ss_pred CCCCCCEEEEEcCCCcchHHHHHHHHHcCCeEeecCCCCCHHHHHHHHhhcCCeEEEEccc
Q 043601 75 GVTKHDVVLIFAPNSIQFPICLLGVIAIGGIATTANPVYTVSELSKQVKDSSPKLVVTVPE 135 (488)
Q Consensus 75 g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~ 135 (488)
-+++|..+.+-.-.+-.-+...+.|..-|+.++.+-|..-..+-+.+++..++++|.++.+
T Consensus 99 ~i~pg~stliEpTSGNtGigLA~~~a~~Gyk~i~tmP~~ms~Ek~~~l~a~Gaeii~tp~a 159 (362)
T KOG1252|consen 99 LITPGKSTLIEPTSGNTGIGLAYMAALRGYKCIITMPEKMSKEKRILLRALGAEIILTPPA 159 (362)
T ss_pred CccCCceEEEecCCCchHHHHHHHHHHcCceEEEEechhhhHHHHHHHHHcCCEEEecChH
Confidence 4788888888776667777788888888987777766666667788999999999999854
No 308
>cd04618 CBS_pair_5 The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic genera
Probab=21.97 E-value=3.3e+02 Score=19.94 Aligned_cols=29 Identities=3% Similarity=0.041 Sum_probs=23.7
Q ss_pred EeecCCCCCHHHHHHHHhhcCCeEEEEcc
Q 043601 106 ATTANPVYTVSELSKQVKDSSPKLVVTVP 134 (488)
Q Consensus 106 ~v~l~~~~~~~~l~~~l~~~~~~~vi~~~ 134 (488)
++.+.|+.+..+....+.+.+.+.+.+-+
T Consensus 52 ~~~v~~~~~l~~a~~~m~~~~~~~lpVvd 80 (98)
T cd04618 52 LVSIHPERSLFDAALLLLKNKIHRLPVID 80 (98)
T ss_pred eEEeCCCCcHHHHHHHHHHCCCCEeeEEE
Confidence 66789999999988888888888777643
No 309
>cd06404 PB1_aPKC PB1 domain is an essential modular domain of the atypical protein kinase C (aPKC) which in complex with Par6 and Par3 proteins is crucial for establishment of apical-basal polarity of animal cells. PB1 domain is a modular domain mediating specific protein-protein interaction which play roles in many critical cell processes. A canonical PB1-PB1 interaction, which involves heterodimerization of two PB1 domains, is required for the formation of macromolecular signaling complexes ensuring specificity and fidelity during cellular signaling. The interaction between two PB1 domain depends on the type of PB1. There are three types of PB1 domains: type I which contains an OPCA motif, acidic aminoacid cluster, type II which contains a basic cluster, and type I/II which contains both an OPCA motif and a basic cluster. Interactions of PB1 domains with other protein domains have been described as noncanonical PB1-interactions. The PB1 domain module is conserved in amoebas, fungi,
Probab=21.90 E-value=1.1e+02 Score=22.08 Aligned_cols=36 Identities=14% Similarity=0.090 Sum_probs=26.3
Q ss_pred CcceeHHHHHHHHHHHHHHHHHcCCC------CCCEEEEEcC
Q 043601 52 GESLTFSQFKSIVIKVSHGFRHLGVT------KHDVVLIFAP 87 (488)
Q Consensus 52 ~~~~Ty~el~~~~~~la~~L~~~g~~------~g~~V~i~~~ 87 (488)
+..+||.+|.++++.+.+....+.++ .||.+.+-..
T Consensus 17 d~~~s~e~L~~~v~~~c~~~~~q~ft~kw~DEEGDp~tiSS~ 58 (83)
T cd06404 17 DPSISLEELCNEVRDMCRFHNDQPFTLKWIDEEGDPCTISSQ 58 (83)
T ss_pred CCCcCHHHHHHHHHHHhCCCCCCcEEEEEECCCCCceeecCH
Confidence 45888999999888888887765442 4777777543
No 310
>PRK06060 acyl-CoA synthetase; Validated
Probab=21.60 E-value=6.4e+02 Score=26.86 Aligned_cols=87 Identities=18% Similarity=0.145 Sum_probs=58.6
Q ss_pred cceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCc--chHHHHHHHHHcCCeEeecCCCCCHHHHHHHHhhcCCeEE
Q 043601 53 ESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSI--QFPICLLGVIAIGGIATTANPVYTVSELSKQVKDSSPKLV 130 (488)
Q Consensus 53 ~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~v 130 (488)
..+|++.+...+..+.. ...++.+++++....+-.. .+...++..+..|+..+..+.......+..+++..++.++
T Consensus 163 V~~sh~~~~~~~~~~~~--~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~i~~~~~t~~ 240 (705)
T PRK06060 163 AIHRHADPLTFVDAMCR--KALRLTPEDTGLCSARMYFAYGLGNSVWFPLATGGSAVINSAPVTPEAAAILSARFGPSVL 240 (705)
T ss_pred EEEccccHHHHHHHHHH--HhhCCCCcceeEEeccchhhcchhHHHHHHHhcCCEEEEeCCCCCHHHHHHHHHhcCCeEE
Confidence 45788777665544322 2346778888776655432 2234456777888888777666777788888999999999
Q ss_pred EEccccHHHHh
Q 043601 131 VTVPELWERVK 141 (488)
Q Consensus 131 i~~~~~~~~~~ 141 (488)
...+.....+.
T Consensus 241 ~~~P~~l~~l~ 251 (705)
T PRK06060 241 YGVPNFFARVI 251 (705)
T ss_pred eeHHHHHHHHH
Confidence 88776665543
No 311
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=21.58 E-value=6.9e+02 Score=24.95 Aligned_cols=85 Identities=13% Similarity=-0.022 Sum_probs=57.5
Q ss_pred hhccHHHHHHhhHH-hhhhhhcCCCCcEEEEecchhhHHhHHHHHHHHhhCCceEEEcCC-CCHHHHHHHHHhcCccEEE
Q 043601 210 ILTHKNFIASSLMT-AMDQELAGALDYVTLCVLPMFHVFGLSFVVYAQLQKGNCVVSMRK-FDLETALRAIEKYRVTHWW 287 (488)
Q Consensus 210 ~~t~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~l~~~~~t~l~ 287 (488)
.+|...+...+... ......+..+++++....+-.... ...+++++..|+..+..+. .....+...+++.+++.++
T Consensus 11 ~~ty~el~~~v~~~a~~L~~~g~~~~~~V~i~~~~~~~~--~~~~la~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~ii 88 (502)
T PRK08276 11 VVTYGELEARSNRLAHGLRALGLREGDVVAILLENNPEF--FEVYWAARRSGLYYTPINWHLTAAEIAYIVDDSGAKVLI 88 (502)
T ss_pred EEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEeCCCHHH--HHHHHHHHhcCcEEEecccccCHHHHHHHHhcCCCCEEE
Confidence 35666665442111 112223467788888776665432 2567888999999998854 6778899999999999999
Q ss_pred ecHHHHHHH
Q 043601 288 VVPPIILAL 296 (488)
Q Consensus 288 ~~p~~~~~l 296 (488)
..+.....+
T Consensus 89 ~~~~~~~~~ 97 (502)
T PRK08276 89 VSAALADTA 97 (502)
T ss_pred EccchhhHH
Confidence 887666544
No 312
>PF11142 DUF2917: Protein of unknown function (DUF2917); InterPro: IPR021317 This bacterial family of proteins appears to be restricted to Proteobacteria.
Probab=21.43 E-value=2.7e+02 Score=18.85 Aligned_cols=28 Identities=21% Similarity=0.475 Sum_probs=18.7
Q ss_pred ceEEEecC------CccccceEEEccCCcEEEEc
Q 043601 392 GELWVRGP------ILMPGDLGYFDEHGQLFIVD 419 (488)
Q Consensus 392 Gel~v~g~------~~~tGD~~~~~~~g~l~~~G 419 (488)
|.+|++-. ++..||...+...+.+++.+
T Consensus 25 G~vWlT~~g~~~D~~L~~G~~l~l~~g~~vvl~a 58 (63)
T PF11142_consen 25 GRVWLTREGDPDDYWLQAGDSLRLRRGGRVVLSA 58 (63)
T ss_pred ccEEEECCCCCCCEEECCCCEEEeCCCCEEEEEe
Confidence 78888754 45567777776666666654
No 313
>TIGR01203 HGPRTase hypoxanthine phosphoribosyltransferase. Sequence differences as small as a single residue can affect whether members of this family act on hypoxanthine and guanine or hypoxanthine only. The designation of this model as equivalog reflects hypoxanthine specificity and does not reflect whether or not guanine can replace hypoxanthine.
Probab=21.34 E-value=2.8e+02 Score=23.20 Aligned_cols=20 Identities=10% Similarity=0.135 Sum_probs=18.6
Q ss_pred eeHHHHHHHHHHHHHHHHHc
Q 043601 55 LTFSQFKSIVIKVSHGFRHL 74 (488)
Q Consensus 55 ~Ty~el~~~~~~la~~L~~~ 74 (488)
+||.|+.+.+.++|..+.+.
T Consensus 3 is~~~i~~~i~~lA~~I~~~ 22 (166)
T TIGR01203 3 IPEEQIKARIAELAKQITED 22 (166)
T ss_pred cCHHHHHHHHHHHHHHHHHH
Confidence 79999999999999999875
No 314
>KOG1794 consensus N-Acetylglucosamine kinase [Carbohydrate transport and metabolism]
Probab=21.33 E-value=2.9e+02 Score=25.55 Aligned_cols=81 Identities=20% Similarity=0.160 Sum_probs=49.2
Q ss_pred CCCccEEEEccCC--CcHHHHHHHHhhCCCCeEEeccCcccccccccccCCCCCCCCCCceeecCCCceEEEEeCCCCCC
Q 043601 308 LSSLKGIGSGAAP--LRKELVEECSKNLPTVTVFQGYGMTETCGVVTVENPLLGVQNSGSTGTLVAGVEAQIVCVDTLKP 385 (488)
Q Consensus 308 l~~lr~v~~~G~~--l~~~~~~~~~~~~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d~~~~~~ 385 (488)
+.+|-.-++|++. -...+.+.|++.|| -..-+.|-++|+-+......+. ...+.+-..--+...+++++ +|..
T Consensus 68 lr~lgL~lSg~d~e~~~~~lv~~~R~~fp-s~ae~~~v~sDa~~sl~a~t~g---~~~GiVLiaGTgs~crl~~~-DGs~ 142 (336)
T KOG1794|consen 68 LRSLGLGLSGTDQEDKNRKLVTEFRDKFP-SVAENFYVTSDADGSLAAATPG---GEGGIVLIAGTGSNCRLVNP-DGSE 142 (336)
T ss_pred cceeeeecccCCchhHHHHHHHHHHHhcc-chhheeeeehhHHHHHhhcCCC---CCCcEEEEecCCceeEEECC-CCCc
Confidence 4445455555543 44577888999998 3445688899986544444332 23444555556778888884 6665
Q ss_pred CCCCCcce
Q 043601 386 LPPNQVGE 393 (488)
Q Consensus 386 ~~~g~~Ge 393 (488)
-..|..|.
T Consensus 143 ~~~ggwg~ 150 (336)
T KOG1794|consen 143 KGAGGWGH 150 (336)
T ss_pred cCCCCCCC
Confidence 55554444
No 315
>PF08845 SymE_toxin: Toxin SymE, type I toxin-antitoxin system; InterPro: IPR014944 This entry represents a SOS-induced gene whose product shows homology to the antitoxin MazE (SymE), the coding region contains a cis-encoded antisense RNA. The small antisense RNA and the gene have the all the hallmarks of a toxin-antitoxin module. The synthesis of the SymE is tightly repressed at multiple levels; at the transcriptional level by the LexA repressor, at the level of mRNA stability and translation by the SymR RNA and at the level of protein stability by the Lon protease. SymE co-purifies with ribosomes and overproduction of the protein leads to cell growth inhibition, decreased protein synthesis and increased RNA degradation. These properties are shared with several RNA endonuclease toxins of toxin-antitoxin modules. It seems probable that the SymE protein represents an evolutionary derivative of a toxin containing the AbrB fold, whose representatives are typically antitoxins. The SymE promoted cleavage of RNA cleavage may be important for the recycling of RNAs damaged under SOS-inducing conditions []. ; GO: 0003723 RNA binding, 0016788 hydrolase activity, acting on ester bonds, 0016070 RNA metabolic process, 0005737 cytoplasm
Probab=21.22 E-value=1.1e+02 Score=20.40 Aligned_cols=22 Identities=18% Similarity=0.055 Sum_probs=17.8
Q ss_pred HHHHHHHcCCCCCCEEEEEcCC
Q 043601 67 VSHGFRHLGVTKHDVVLIFAPN 88 (488)
Q Consensus 67 la~~L~~~g~~~g~~V~i~~~n 88 (488)
-+.+|.++|+..|+.|-|-..+
T Consensus 29 ~G~WL~~aGF~~G~~v~V~v~~ 50 (57)
T PF08845_consen 29 KGKWLEEAGFTIGDPVKVRVMP 50 (57)
T ss_pred chhhhHHhCCCCCCEEEEEEEC
Confidence 3678999999999999885543
No 316
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=20.93 E-value=8.5e+02 Score=24.38 Aligned_cols=68 Identities=18% Similarity=0.198 Sum_probs=47.4
Q ss_pred HHcCCCCCCEEEEEcCCCcc-hHHHHHHHHHcCCeEeecCCCCCHHHHHHHHhhcCCeEEEEccccHHHH
Q 043601 72 RHLGVTKHDVVLIFAPNSIQ-FPICLLGVIAIGGIATTANPVYTVSELSKQVKDSSPKLVVTVPELWERV 140 (488)
Q Consensus 72 ~~~g~~~g~~V~i~~~n~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 140 (488)
...++.+++++....|-... .....+..+..|+..+.. +..+.+.+...+++.++.+++..+.....+
T Consensus 189 ~~~~~~~~~~~l~~~p~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l 257 (509)
T PRK12406 189 LIYGLKPGIRALLTGPLYHSAPNAYGLRAGRLGGVLVLQ-PRFDPEELLQLIERHRITHMHMVPTMFIRL 257 (509)
T ss_pred hhcCCCCCceEEEEeCCcccchHHHHHHHHhhheEEEEc-cCCCHHHHHHHHHHcCCeEEEccHHHHHHH
Confidence 34578899988877664322 123334456677776655 457889999999999999999877765544
No 317
>TIGR01124 ilvA_2Cterm threonine ammonia-lyase, biosynthetic, long form. Forms scoring between the trusted and noise cutoff tend to branch with this subgroup of threonine ammonia-lyase phylogenetically but have only a single copy of the C-terminal domain.
Probab=20.91 E-value=6e+02 Score=25.86 Aligned_cols=90 Identities=12% Similarity=0.060 Sum_probs=57.2
Q ss_pred CceEEEeCCCCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHHcCCeEeecCCCCCHHHHHHH
Q 043601 42 SKSALIDADSGESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQFPICLLGVIAIGGIATTANPVYTVSELSKQ 121 (488)
Q Consensus 42 ~~~a~~~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~ 121 (488)
.++.+-..+...+-||+. .-..+.+++.-.+.+ .+| .+.+..+-.-....++|.+.|+.++.+-|...+......
T Consensus 32 ~~i~lK~E~lqptgSfK~-RgA~n~i~~l~~~~~-~~g---VV~aSaGNha~~vA~aa~~~Gi~~~IvmP~~tp~~Kv~~ 106 (499)
T TIGR01124 32 NRILIKREDLQPVFSFKL-RGAYNKMAQLSPEQK-ARG---VIAASAGNHAQGVAFSAARLGLKALIVMPETTPDIKVDA 106 (499)
T ss_pred CEEEEEecCCCCCCCCHH-HHHHHHHHHhhHHhc-CCE---EEEECCCHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHH
Confidence 456665554445557766 333344443223322 222 334556667777888899999877776677666666778
Q ss_pred HhhcCCeEEEEcccc
Q 043601 122 VKDSSPKLVVTVPEL 136 (488)
Q Consensus 122 l~~~~~~~vi~~~~~ 136 (488)
++..+++++++....
T Consensus 107 ~r~~GA~Vvl~g~~~ 121 (499)
T TIGR01124 107 VRGFGGEVVLHGANF 121 (499)
T ss_pred HHhCCCEEEEeCcCH
Confidence 999999999997543
No 318
>PRK08813 threonine dehydratase; Provisional
Probab=20.85 E-value=7.2e+02 Score=23.84 Aligned_cols=81 Identities=11% Similarity=-0.031 Sum_probs=50.8
Q ss_pred CcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHHcCCeEeecCCCCCHHHHHHHHhhcCCeEEE
Q 043601 52 GESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQFPICLLGVIAIGGIATTANPVYTVSELSKQVKDSSPKLVV 131 (488)
Q Consensus 52 ~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vi 131 (488)
+.+-||+.--. .+.+.+. .+.|...+ .+.+..+-.-....++|...|..+..+-|..........++.++++++.
T Consensus 58 nptGSfK~RgA-~~~l~~a-~~~~~~~~---VV~aSsGN~G~alA~aa~~~Gi~~~IvvP~~~~~~K~~~i~~~GAeVv~ 132 (349)
T PRK08813 58 QRTGSYKVRGA-LNALLAG-LERGDERP---VICASAGNHAQGVAWSAYRLGVQAITVMPHGAPQTKIAGVAHWGATVRQ 132 (349)
T ss_pred CCcCCCHHHHH-HHHHHHH-HHcCCCCe---EEEECCCHHHHHHHHHHHHcCCCEEEEEcCCCCHHHHHHHHHcCCEEEE
Confidence 35566664322 2333333 33343322 3556667777888889999998655544555555666777999999999
Q ss_pred EccccH
Q 043601 132 TVPELW 137 (488)
Q Consensus 132 ~~~~~~ 137 (488)
+...+.
T Consensus 133 ~g~~~~ 138 (349)
T PRK08813 133 HGNSYD 138 (349)
T ss_pred ECCCHH
Confidence 976543
No 319
>PLN02723 3-mercaptopyruvate sulfurtransferase
Probab=20.71 E-value=2.4e+02 Score=26.67 Aligned_cols=48 Identities=13% Similarity=0.083 Sum_probs=35.1
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCCCcch-HHHHHHHHHcCCe-EeecCCC
Q 043601 65 IKVSHGFRHLGVTKHDVVLIFAPNSIQF-PICLLGVIAIGGI-ATTANPV 112 (488)
Q Consensus 65 ~~la~~L~~~g~~~g~~V~i~~~n~~~~-~~~~lA~~~~G~~-~v~l~~~ 112 (488)
..++..|.+.|+.++++|.+++.++..+ ..+++.+..+|.. +..++..
T Consensus 89 ~~~~~~l~~~Gi~~~~~VVvY~~~g~~~a~r~~~~L~~~G~~~V~~LdGG 138 (320)
T PLN02723 89 EAFAAAVSALGIENKDGVVVYDGKGIFSAARVWWMFRVFGHEKVWVLDGG 138 (320)
T ss_pred HHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHHHcCCCceEEcCCC
Confidence 5678889999999999999999877554 3445677778874 3345443
No 320
>PRK06145 acyl-CoA synthetase; Validated
Probab=20.55 E-value=8.5e+02 Score=24.23 Aligned_cols=84 Identities=15% Similarity=0.221 Sum_probs=57.6
Q ss_pred cceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCcc--hHHHHHHHHHcCCeEeecCCCCCHHHHHHHHhhcCCeEE
Q 043601 53 ESLTFSQFKSIVIKVSHGFRHLGVTKHDVVLIFAPNSIQ--FPICLLGVIAIGGIATTANPVYTVSELSKQVKDSSPKLV 130 (488)
Q Consensus 53 ~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~--~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~v 130 (488)
..+|++.+...+. ......++..++++....|-... +....++.+..|+..+.. +..+...+...+++.++..+
T Consensus 167 v~~s~~~~~~~~~---~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~g~~~~~~-~~~~~~~~~~~i~~~~~t~~ 242 (497)
T PRK06145 167 VMHSYGNLHWKSI---DHVIALGLTASERLLVVGPLYHVGAFDLPGIAVLWVGGTLRIH-REFDPEAVLAAIERHRLTCA 242 (497)
T ss_pred EEEecHHHHHHHH---HHHHhhCCCCCcEEEEecCchhHhHHHHHHHHHHhccCEEEEC-CcCCHHHHHHHHHHhCCeEE
Confidence 5688888865433 33445588999998877764322 223345667778776655 45778888899999999988
Q ss_pred EEccccHHHH
Q 043601 131 VTVPELWERV 140 (488)
Q Consensus 131 i~~~~~~~~~ 140 (488)
...+.....+
T Consensus 243 ~~~P~~~~~l 252 (497)
T PRK06145 243 WMAPVMLSRV 252 (497)
T ss_pred EehHHHHHHH
Confidence 8876665544
No 321
>PF01436 NHL: NHL repeat; InterPro: IPR001258 The NHL repeat, named after NCL-1, HT2A and Lin-41, is found largely in a large number of eukaryotic and prokaryotic proteins. For example, the repeat is found in a variety of enzymes of the copper type II, ascorbate-dependent monooxygenase family which catalyse the C terminus alpha-amidation of biological peptides []. In many it occurs in tandem arrays, for example in the ringfinger beta-box, coiled-coil (RBCC) eukaryotic growth regulators []. The 'Brain Tumor' protein (Brat) is one such growth regulator that contains a 6-bladed NHL-repeat beta-propeller [, ]. The NHL repeats are also found in serine/threonine protein kinase (STPK) in diverse range of pathogenic bacteria. These STPK are transmembrane receptors with a intracellular N-terminal kinase domain and extracellular C-terminal sensor domain. In the STPK, PknD, from Mycobacterium tuberculosis, the sensor domain forms a rigid, six-bladed b-propeller composed of NHL repeats with a flexible tether to the transmembrane domain.; GO: 0005515 protein binding; PDB: 3FVZ_A 3FW0_A 1RWL_A 1RWI_A 1Q7F_A.
Probab=20.44 E-value=1.3e+02 Score=16.26 Aligned_cols=18 Identities=17% Similarity=0.508 Sum_probs=12.0
Q ss_pred EccCCcEEEEcccCccee
Q 043601 409 FDEHGQLFIVDRIKELIK 426 (488)
Q Consensus 409 ~~~~g~l~~~GR~~d~i~ 426 (488)
++++|.+++..+....|+
T Consensus 9 v~~~g~i~VaD~~n~rV~ 26 (28)
T PF01436_consen 9 VDSDGNIYVADSGNHRVQ 26 (28)
T ss_dssp EETTSEEEEEECCCTEEE
T ss_pred EeCCCCEEEEECCCCEEE
Confidence 347778888777666554
No 322
>PRK06178 acyl-CoA synthetase; Validated
Probab=20.35 E-value=6.7e+02 Score=25.67 Aligned_cols=86 Identities=12% Similarity=0.071 Sum_probs=59.7
Q ss_pred hhccHHHHHHhhHHh-hhhhhcCCCCcEEEEecchhhHHhHHHHHHHHhhCCceEEEcCC-CCHHHHHHHHHhcCccEEE
Q 043601 210 ILTHKNFIASSLMTA-MDQELAGALDYVTLCVLPMFHVFGLSFVVYAQLQKGNCVVSMRK-FDLETALRAIEKYRVTHWW 287 (488)
Q Consensus 210 ~~t~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~l~~~~~t~l~ 287 (488)
.+|...+...+.... .....+..+++.+....+-... +...+++++..|+..+..++ .....+...+++.++..++
T Consensus 58 ~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~--~~~~~lA~~~~G~~~v~l~p~~~~~~~~~~l~~~~~~~ii 135 (567)
T PRK06178 58 VITYAELDELSDRFAALLRQRGVGAGDRVAVFLPNCPQ--FHIVFFGILKLGAVHVPVSPLFREHELSYELNDAGAEVLL 135 (567)
T ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCcH--HHHHHHHHHHhCeEEeecCCCCCHHHHHHHHHhcCCcEEE
Confidence 477777766522211 1112345677877777665543 23567888899999887754 6788999999999999999
Q ss_pred ecHHHHHHHH
Q 043601 288 VVPPIILALA 297 (488)
Q Consensus 288 ~~p~~~~~l~ 297 (488)
+.+..+..+.
T Consensus 136 ~~~~~~~~l~ 145 (567)
T PRK06178 136 ALDQLAPVVE 145 (567)
T ss_pred EccchHHHHH
Confidence 9888766554
No 323
>PF01060 DUF290: Transthyretin-like family; InterPro: IPR001534 This new apparently nematode-specific protein family has been called family 2 []. The proteins show weak similarity to transthyretin (formerly called prealbumin) which transports thyroid hormones. The specific function of this protein is unknown.; GO: 0005615 extracellular space
Probab=20.11 E-value=3.2e+02 Score=19.42 Aligned_cols=46 Identities=20% Similarity=0.160 Sum_probs=28.8
Q ss_pred eeecCCCceEEEEeCCCCCCCCCCCcceEEEecCCccccceEEEccCCcEEEEcccCccee
Q 043601 366 TGTLVAGVEAQIVCVDTLKPLPPNQVGELWVRGPILMPGDLGYFDEHGQLFIVDRIKELIK 426 (488)
Q Consensus 366 ~g~~~~~~~~~i~d~~~~~~~~~g~~Gel~v~g~~~~tGD~~~~~~~g~l~~~GR~~d~i~ 426 (488)
-|+|..++.|++.+.+. .-+.. + =|...-+.+|.+.+.|..++...
T Consensus 7 ~~~P~~~~~V~L~e~d~--~~~Dd----l---------l~~~~Td~~G~F~l~G~~~e~~~ 52 (80)
T PF01060_consen 7 GGKPAKNVKVKLWEDDY--FDPDD----L---------LDETKTDSDGNFELSGSTNEFTT 52 (80)
T ss_pred CCccCCCCEEEEEECCC--CCCCc----e---------eEEEEECCCceEEEEEEccCCcc
Confidence 47889999999999532 11111 1 12234577888888888777533
Done!