BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043604
(268 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P50876|R144A_HUMAN Probable E3 ubiquitin-protein ligase RNF144A OS=Homo sapiens
GN=RNF144A PE=1 SV=2
Length = 292
Score = 68.9 bits (167), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 84/192 (43%), Gaps = 10/192 (5%)
Query: 35 NGIFTCEICIEPISANDKFRNKDLCSHHFCQDCIAKYIEAKVQDNNTAKIECPGVHCDQ- 93
+ + +C++C+ ++ C FC C+ +Y+E +++ I CP C +
Sbjct: 15 DPLVSCKLCLGEYPV-EQMTTIAQCQCIFCTLCLKQYVELLIKEGLETAISCPDAACPKQ 73
Query: 94 -FLDPFSCKLMIPSNLFSKWCDVLFEDYVLGFE--RSYCPNRNCMALVVNGCEINYGTLK 150
L + M+ + + ++ + FE VL F+ R++CP C A V ++ T +
Sbjct: 74 GHLQENEIECMVAAEIMQRYKKLQFEREVL-FDPCRTWCPASTCQA-VCQLQDVGLQTPQ 131
Query: 151 KARCPNCTQWFCFQCKLAWHAGYRCEESGN---LRDWNDIAFGKLVERMHWARCPACGSC 207
+C C FC CK +WH G C E+ L AF + RCP C
Sbjct: 132 PVQCKACRMEFCSTCKASWHPGQGCPETMPITFLPGETSAAFKMEEDDAPIKRCPKCKVY 191
Query: 208 VERKEGCRVMYC 219
+ER EGC M C
Sbjct: 192 IERDEGCAQMMC 203
>sp|Q9Z1K6|ARI2_MOUSE E3 ubiquitin-protein ligase ARIH2 OS=Mus musculus GN=Arih2 PE=2
SV=1
Length = 492
Score = 67.8 bits (164), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 90/217 (41%), Gaps = 19/217 (8%)
Query: 11 NRECILQQEKVHENPQQEIELEDTNGIFTCEICIEPISANDKFRNKDLCSHHFCQDCIAK 70
N +L + +V NP + + + C +C++ + + C H FC+ C +
Sbjct: 111 NSAQLLVEARVQPNPSKHVPT--AHPPHHCAVCMQFVRKENLLSLA--CQHQFCRSCWEQ 166
Query: 71 YIEAKVQDNNTAKIECPGVHCD-QFLDPFSCKLMIPSNLFSKWCDVLFEDYVLG-FERSY 128
+ V+D I C C + + F L+ L K+ LF DYV F+
Sbjct: 167 HCSVLVKDGVGVGISCMAQDCPLRTPEDFVFPLLPNEELRDKYRRYLFRDYVESHFQLQL 226
Query: 129 CPNRNCMALVVNGCEINYGTLKKARCPNCTQWFCFQCKLAWHAGYRCEESGNLRDW---- 184
CP +C ++ + ++ +C C++ FCF+C+ +HA C +R W
Sbjct: 227 CPGADCPMVI----RVQEPRARRVQCNRCSEVFCFKCRQMYHAPTDC---ATIRKWLTKC 279
Query: 185 -NDIAFGKLVERMHWARCPACGSCVERKEGCRVMYCS 220
+D + H CP C C+E+ GC M CS
Sbjct: 280 ADDSETANYIS-AHTKDCPKCNICIEKNGGCNHMQCS 315
>sp|Q925F3|R144A_MOUSE Probable E3 ubiquitin-protein ligase RNF144A OS=Mus musculus
GN=Rnf144a PE=1 SV=1
Length = 292
Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 83/192 (43%), Gaps = 10/192 (5%)
Query: 35 NGIFTCEICIEPISANDKFRNKDLCSHHFCQDCIAKYIEAKVQDNNTAKIECPGVHCDQ- 93
+ + +C++C+ A ++ C FC C+ +Y+E +++ I CP C +
Sbjct: 15 DPLVSCKLCLGEYPA-EQMTTIAQCQCIFCTLCLKQYVELLIKEGLETAISCPDAACPKQ 73
Query: 94 -FLDPFSCKLMIPSNLFSKWCDVLFEDYVLGFE--RSYCPNRNCMALVVNGCEINYGTLK 150
L + M+ + + ++ + FE VL F+ R++CP C A V +I T +
Sbjct: 74 GHLQENEIECMVAAEIMQRYKKLQFEREVL-FDPCRTWCPASTCQA-VCQLQDIGLQTPQ 131
Query: 151 KARCPNCTQWFCFQCKLAWHAGYRCEESGN---LRDWNDIAFGKLVERMHWARCPACGSC 207
+C C FC CK WH G C E+ L AF RCP C
Sbjct: 132 LVQCKACDMEFCSACKARWHPGQGCPETMPITFLPGETSSAFKMEEGDAPIKRCPKCRVY 191
Query: 208 VERKEGCRVMYC 219
+ER EGC M C
Sbjct: 192 IERDEGCAQMMC 203
>sp|O76924|ARI2_DROME Protein ariadne-2 OS=Drosophila melanogaster GN=ari-2 PE=2 SV=1
Length = 509
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 82/187 (43%), Gaps = 17/187 (9%)
Query: 40 CEICIEPISANDKFRNKDLCSHHFCQDCIAKYIEAKVQDNNTAKIECPGVHCD-QFLDPF 98
C +C DKF + C H FC+DC Y E ++ + +I C C+ + +
Sbjct: 153 CPVCASS-QLGDKFYSL-ACGHSFCKDCWTIYFETQIFQGISTQIGCMAQMCNVRVPEDL 210
Query: 99 SCKLMIPSNLFSKWCDVLFEDYVLGF-ERSYCPNRNCMALVVNGCEINYGTLKKARCPNC 157
L+ + K+ F+DYV E +CP NC ++V EI + K+A C C
Sbjct: 211 VLTLVTRPVMRDKYQQFAFKDYVKSHPELRFCPGPNCQ-IIVQSSEI---SAKRAICKAC 266
Query: 158 TQWFCFQCKLAWHAGYRCEESGNLRDW-----NDIAFGKLVERMHWARCPACGSCVERKE 212
FCF+C + +HA C+ ++ W +D + H CP C C+E+
Sbjct: 267 HTGFCFRCGMDYHAPTDCQV---IKKWLTKCADDSETANYIS-AHTKDCPKCHICIEKNG 322
Query: 213 GCRVMYC 219
GC M C
Sbjct: 323 GCNHMQC 329
>sp|A5PK27|R144B_BOVIN E3 ubiquitin-protein ligase RNF144B OS=Bos taurus GN=RNF144B PE=2
SV=1
Length = 304
Score = 65.9 bits (159), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 83/188 (44%), Gaps = 8/188 (4%)
Query: 37 IFTCEICIEPISANDKFRNKDLCSHHFCQDCIAKYIEAKVQDNNTAKIECPGVHC--DQF 94
+ TC++C+ S DK C FC C+ +Y++ +++ + I CP + C
Sbjct: 28 LVTCKLCLCEQSL-DKMTTLQECRCIFCTACLKQYMQLAIREGCGSPITCPDMVCLNHGT 86
Query: 95 LDPFSCKLMIPSNLFSKWCDVLFEDYV-LGFERSYCPNRNCMALVVNGCEINYGTLKKAR 153
L ++P + F + + FE V L R++CP +C V + G
Sbjct: 87 LQEAEIACLVPVDQFQLYQRLKFEREVHLDPCRTWCPVADCQT-VCPVATSDPGQPVLVE 145
Query: 154 CPNCTQWFCFQCKLAWHAGYRCEES--GNLRDWNDIAFGKLVERMHWARCPACGSCVERK 211
CP+C FC CK AWHA C +S G L + FG + +CP C +ER
Sbjct: 146 CPSCHLKFCSCCKDAWHAEVSCRDSQPGILPTEHGTLFGTETD-APIKQCPVCRVYIERN 204
Query: 212 EGCRVMYC 219
EGC M C
Sbjct: 205 EGCAQMMC 212
>sp|O95376|ARI2_HUMAN E3 ubiquitin-protein ligase ARIH2 OS=Homo sapiens GN=ARIH2 PE=1
SV=1
Length = 493
Score = 65.9 bits (159), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 90/217 (41%), Gaps = 19/217 (8%)
Query: 11 NRECILQQEKVHENPQQEIELEDTNGIFTCEICIEPISANDKFRNKDLCSHHFCQDCIAK 70
N +L + +V NP + + ++ C +C++ + + C H FC+ C +
Sbjct: 112 NSAQLLVEARVQPNPSKHVPT--SHPPHHCAVCMQFVRKENLLSLA--CQHQFCRSCWEQ 167
Query: 71 YIEAKVQDNNTAKIECPGVHCD-QFLDPFSCKLMIPSNLFSKWCDVLFEDYVLG-FERSY 128
+ V+D + C C + + F L+ L K+ LF DYV ++
Sbjct: 168 HCSVLVKDGVGVGVSCMAQDCPLRTPEDFVFPLLPNEELREKYRRYLFRDYVESHYQLQL 227
Query: 129 CPNRNCMALVVNGCEINYGTLKKARCPNCTQWFCFQCKLAWHAGYRCEESGNLRDW---- 184
CP +C ++ + ++ +C C + FCF+C+ +HA C +R W
Sbjct: 228 CPGADCPMVI----RVQEPRARRVQCNRCNEVFCFKCRQMYHAPTDC---ATIRKWLTKC 280
Query: 185 -NDIAFGKLVERMHWARCPACGSCVERKEGCRVMYCS 220
+D + H CP C C+E+ GC M CS
Sbjct: 281 ADDSETANYIS-AHTKDCPKCNICIEKNGGCNHMQCS 316
>sp|A4IIY1|R144A_XENTR Probable E3 ubiquitin-protein ligase RNF144A OS=Xenopus tropicalis
GN=rnf144a PE=2 SV=1
Length = 292
Score = 65.9 bits (159), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 88/201 (43%), Gaps = 11/201 (5%)
Query: 25 PQQEIELEDTNGIFTCEICIEPISANDKFRNKDLCSHHFCQDCIAKYIEAKVQDNNTAKI 84
P ++ LE + +C++C+ + ++ C FC C+ +Y+E +++ I
Sbjct: 8 PTWDLALEP---LVSCKLCLGEYTV-EQMTTIAQCQCIFCTLCLKQYVELLIKEGLETAI 63
Query: 85 ECPGVHCDQ--FLDPFSCKLMIPSNLFSKWCDVLFEDYVLGFE-RSYCPNRNCMALVVNG 141
CP C + L + M+ + + K+ + FE +L R++CP+ +C A V
Sbjct: 64 SCPDASCPKRGHLQENEIECMVAAEIMQKYKKLQFEKEILLDPCRTWCPSSSCQA-VCKL 122
Query: 142 CEINYGTLKKARCPNCTQWFCFQCKLAWHAGYRCEESGN---LRDWNDIAFGKLVERMHW 198
E + +C C FC CK WH G C E+ L + F L + +
Sbjct: 123 QEKGIQNPQLVQCSACDIEFCSACKANWHPGQGCPENMAITFLPGDSSSFFKSLEDDVPI 182
Query: 199 ARCPACGSCVERKEGCRVMYC 219
RCP C +ER EGC M C
Sbjct: 183 KRCPKCKVYIERDEGCAQMMC 203
>sp|Q5RFV4|R1441_DANRE Probable E3 ubiquitin-protein ligase RNF144A-A OS=Danio rerio
GN=rnf144aa PE=3 SV=1
Length = 293
Score = 65.5 bits (158), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 85/192 (44%), Gaps = 9/192 (4%)
Query: 35 NGIFTCEICIEPISANDKFRNKDLCSHHFCQDCIAKYIEAKVQDNNTAKIECPGVHCDQ- 93
+ + +C++C+ ++ C FC C+ +Y+E +++ I CP C +
Sbjct: 15 DPLVSCKLCLGEFPL-EQMTTITQCQCVFCTMCLKQYVELLIKEGFETAISCPDSACPKR 73
Query: 94 -FLDPFSCKLMIPSNLFSKWCDVLFE-DYVLGFERSYCPNRNCMALVVNGCEINYGTLKK 151
L + M+ + + ++ + FE + +L R++CP+ C A V E + +
Sbjct: 74 GHLQENEIECMVATEIMQRYRKLQFEKEVLLDPSRTWCPSSTCQA-VCQLKESDTVLPQL 132
Query: 152 ARCPNCTQWFCFQCKLAWHAGYRCEESGNLRDW----NDIAFGKLVERMHWARCPACGSC 207
RC CT FC CK +WH C+E+ + + + F + RCP C
Sbjct: 133 VRCSVCTLEFCSACKASWHPDQDCQENVPITSFLPGESSSFFKADDDDAPIKRCPKCKVY 192
Query: 208 VERKEGCRVMYC 219
+ER EGC M C
Sbjct: 193 IERDEGCAQMMC 204
>sp|Q7Z419|R144B_HUMAN E3 ubiquitin-protein ligase RNF144B OS=Homo sapiens GN=RNF144B PE=1
SV=1
Length = 303
Score = 65.1 bits (157), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 82/188 (43%), Gaps = 8/188 (4%)
Query: 37 IFTCEICIEPISANDKFRNKDLCSHHFCQDCIAKYIEAKVQDNNTAKIECPGVHC--DQF 94
+ TC++C+ S DK C FC C+ +Y++ +++ + I CP + C
Sbjct: 27 LITCKLCLCEQSL-DKMTTLQECQCIFCTACLKQYMQLAIREGCGSPITCPDMVCLNHGT 85
Query: 95 LDPFSCKLMIPSNLFSKWCDVLFEDYV-LGFERSYCPNRNCMALVVNGCEINYGTLKKAR 153
L ++P + F + + FE V L R++CP +C V + G
Sbjct: 86 LQEAEIACLVPVDQFQLYQRLKFEREVHLDPYRTWCPVADCQT-VCPVASSDPGQPVLVE 144
Query: 154 CPNCTQWFCFQCKLAWHAGYRCEESGN--LRDWNDIAFGKLVERMHWARCPACGSCVERK 211
CP+C FC CK AWHA C +S L + FG E +CP C +ER
Sbjct: 145 CPSCHLKFCSCCKDAWHAEVSCRDSQPIVLPTEHRALFGTDAE-APIKQCPVCRVYIERN 203
Query: 212 EGCRVMYC 219
EGC M C
Sbjct: 204 EGCAQMMC 211
>sp|Q4KLT0|RN217_XENLA Probable E3 ubiquitin-protein ligase RNF217 OS=Xenopus laevis
GN=rnf217 PE=2 SV=1
Length = 282
Score = 65.1 bits (157), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 83/197 (42%), Gaps = 29/197 (14%)
Query: 38 FTCEICIEPISANDKFRNKDLCSHHFCQDCIAKYIEAKVQDNNTAKIECPGVHCDQFLDP 97
+C +C+E + + C C +C+ +Y+ ++VQ A+I+CP C++ LD
Sbjct: 1 MSCRVCLE----DRSIKPLPCCKKPVCDECLKRYLSSQVQLGQ-AEIQCPITECNKHLDE 55
Query: 98 FSCKLMIPSNLFSKWCDVLFEDYVLGFER-----SYCPNRNCMALVVNGCEINYGTLK-- 150
+ +P + D++ Y L R CP I T
Sbjct: 56 STILYSLPHD------DIIKYKYFLELSRMDSSTKPCPQCKHFTTFKRKTHIPNPTKSEN 109
Query: 151 --KARCPNCTQWFCFQCKLAWHAGYRCEESGN----LRDW-NDIAFGKLVERMHWARCPA 203
K +CP+C +CF+C WH G C E LR W N+I G+ + +CP
Sbjct: 110 KLKIQCPSCQFIWCFRCHAPWHEGVNCREYKKGDKLLRHWANEIEHGQ----RNAQKCPR 165
Query: 204 CGSCVERKEGCRVMYCS 220
C ++R EGC M CS
Sbjct: 166 CKVHIQRTEGCDHMTCS 182
>sp|Q8BKD6|R144B_MOUSE E3 ubiquitin-protein ligase RNF144B OS=Mus musculus GN=Rnf144b PE=2
SV=2
Length = 301
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 83/189 (43%), Gaps = 12/189 (6%)
Query: 37 IFTCEICIEPISANDKFRNKDLCSHHFCQDCIAKYIEAKVQDNNTAKIECPGVHC--DQF 94
+ TC++C+ S DK C FC C+ +Y+ +++ + I CP + C
Sbjct: 27 LVTCKLCLCEQSL-DKMTMLQECQCIFCTPCLKQYMVLSIREGCGSPITCPDMVCLNHGT 85
Query: 95 LDPFSCKLMIPSNLFSKWCDVLFEDYV-LGFERSYCPNRNCMALVVNGCEINYGTLKK-- 151
L ++P + F + + FE V + R++CP +C + C I+ G +
Sbjct: 86 LQETEIACLVPLDEFQLYQRLKFEREVHMDPLRTWCPVADCQTV----CHISAGDPGQPV 141
Query: 152 -ARCPNCTQWFCFQCKLAWHAGYRCEESGNLRDWNDIAFGKLVERMHWARCPACGSCVER 210
CP+C FC CK AWH C +S + + FG + +CP C +ER
Sbjct: 142 LVECPSCHLKFCSCCKDAWHEESSCRDSQSAMPEHGALFGTDADA-PIKQCPVCRIYIER 200
Query: 211 KEGCRVMYC 219
EGC M C
Sbjct: 201 NEGCAQMMC 209
>sp|Q6DH94|R1442_DANRE Probable E3 ubiquitin-protein ligase RNF144A-B OS=Danio rerio
GN=rnf144ab PE=2 SV=1
Length = 293
Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 85/197 (43%), Gaps = 15/197 (7%)
Query: 33 DTNGIFTCEICIEPISANDKFRNKDLCSHHFCQDCIAKYIEAKVQDNNTAKIECPGVHCD 92
D + +C++C+ ++ C FC C+ +Y+E +++ I CP C
Sbjct: 13 DLAPLLSCKLCLGEFPL-EQMTTISQCQCIFCSLCLKQYVELLIKEGLETAISCPDSACP 71
Query: 93 Q--FLDPFSCKLMIPSNLFSKWCDVLFE-DYVLGFERSYCPNRNCMALVVNGCEINYGTL 149
+ L + M+ + + + FE + +L R++CP+ +C A+ C++N +
Sbjct: 72 KQGHLLENEIECMVAGEVMQHYKRLQFEREVLLDPCRTWCPSSSCQAV----CQLNEAEV 127
Query: 150 K---KARCPNCTQWFCFQCKLAWHAGYRCEE----SGNLRDWNDIAFGKLVERMHWARCP 202
+ +CP C+ FC C+ H G C+E + L N + RCP
Sbjct: 128 QLPQPVQCPECSLRFCSACRADCHTGQACQEMLPITTFLPGENGSNLKSQEDEAPIKRCP 187
Query: 203 ACGSCVERKEGCRVMYC 219
C +ER EGC M C
Sbjct: 188 KCKVYIERDEGCAQMMC 204
>sp|Q9UBS8|RNF14_HUMAN E3 ubiquitin-protein ligase RNF14 OS=Homo sapiens GN=RNF14 PE=1
SV=1
Length = 474
Score = 61.2 bits (147), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 109/253 (43%), Gaps = 44/253 (17%)
Query: 2 RISQQKPIENRECI--LQQEKVHENPQQEIELEDTNGIFTCEICI-EPISANDKFRNKDL 58
I ++ +++ E + L QE + + Q+I+ ++ +F C IC E + + + +
Sbjct: 181 EIVDERAVQDVESLSNLIQEILDFDQAQQIKCFNSK-LFLCSICFCEKLGSECMYFLE-- 237
Query: 59 CSHHFCQDCIAKYIEAKVQDNNTAKIECPGVHCDQFLDPFSCKLMIPSNLFSKWCDVLFE 118
C H +C+ C+ Y E +++D + CP C P K ++ + LF+++ +L +
Sbjct: 238 CRHVYCKACLKDYFEIQIRDGQVQCLNCPEPKCPSVATPGQVKELVEAELFARYDRLLLQ 297
Query: 119 DYV-LGFERSYCPNRNCMALVVN--GCEINYGTLKKARCPNCTQWFCFQCKLAWHAGYRC 175
+ L + YCP C V+ GC + C +C FC C+L +H C
Sbjct: 298 SSLDLMADVVYCPRPCCQLPVMQEPGCTMGI-------CSSCNFAFCTLCRLTYHGVSPC 350
Query: 176 ----EESGNLRD-----------WNDIAFGKLV--------ERMHWAR-----CPACGSC 207
E+ +LR+ D +GK V E W CP CG+
Sbjct: 351 KVTAEKLMDLRNEYLQADEANKRLLDQRYGKRVIQKALEEMESKEWLEKNSKSCPCCGTP 410
Query: 208 VERKEGCRVMYCS 220
+E+ +GC M C+
Sbjct: 411 IEKLDGCNKMTCT 423
>sp|Q9JI90|RNF14_MOUSE E3 ubiquitin-protein ligase RNF14 OS=Mus musculus GN=Rnf14 PE=2
SV=2
Length = 485
Score = 60.8 bits (146), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 94/214 (43%), Gaps = 37/214 (17%)
Query: 37 IFTCEICI-EPISANDKFRNKDLCSHHFCQDCIAKYIEAKVQDNNTAKIECPGVHCDQFL 95
+F C IC E + ++ + + C H +C+ C+ Y E +++D + CP C
Sbjct: 218 LFLCSICFCEKLGSDCMYFLE--CKHVYCKACLKDYFEIQIKDGQVKCLNCPEPQCPSVA 275
Query: 96 DPFSCKLMIPSNLFSKWCDVLFEDYV-LGFERSYCPNRNCMALVVNGCEINYGTLKKARC 154
P K ++ ++LF+++ +L + + L + YCP C V+ GT+ A C
Sbjct: 276 TPGQVKELVEADLFARYDRLLLQSTLDLMADVVYCPRPCCQLPVMQE---PGGTM--AIC 330
Query: 155 PNCTQWFCFQCKLAWHAGYRCEESG----NLRD---WNDIAFGKLVERMHWAR------- 200
+C FC C+L +H C+ + +LR+ D A + +E+ + R
Sbjct: 331 SSCNFAFCTLCRLTYHGLSPCKVTAEKLIDLRNEYLQADEATKRFLEQRYGKRVIQKALE 390
Query: 201 --------------CPACGSCVERKEGCRVMYCS 220
CP CG+ +++ +GC M C+
Sbjct: 391 EMESKDWLEKNSKSCPCCGTPIQKLDGCNKMTCT 424
>sp|Q8IWT3|CUL9_HUMAN Cullin-9 OS=Homo sapiens GN=CUL9 PE=1 SV=2
Length = 2517
Score = 59.3 bits (142), Expect = 3e-08, Method: Composition-based stats.
Identities = 44/193 (22%), Positives = 78/193 (40%), Gaps = 19/193 (9%)
Query: 40 CEICIEPISANDKFRNKDLCSHHFCQDCIAKYIEAKVQDNNTAKIECPGVHCD-QFLDPF 98
C +C+ P+ +D + C H+ C+ C +Y+ +++ N CP C Q F
Sbjct: 2070 CPVCVSPLGCDDDLPSL-CCMHYCCKSCWNEYLTTRIEQNLVLNCTCPIADCPAQPTGAF 2128
Query: 99 SCKLMIPSNLFSKWCDVLFEDYVLGFER-SYCPNRNCMALVVNGCEINYGTLKKARCPNC 157
++ + SK+ L YV ++C N ++ + GT C C
Sbjct: 2129 IRAIVSSPEVISKYEKALLRGYVESCSNLTWCTNPQGCDRILCRQGLGCGT----TCSKC 2184
Query: 158 TQWFCFQCKLAWHAGYRCEESGNLRDWNDI----------AFGKLVERMHWARCPACGSC 207
CF C ++ + G++ W D A K + ++ RCP+C +
Sbjct: 2185 GWASCFNC--SFPEAHYPASCGHMSQWVDDGGYYDGMSVEAQSKHLAKLISKRCPSCQAP 2242
Query: 208 VERKEGCRVMYCS 220
+E+ EGC M C+
Sbjct: 2243 IEKNEGCLHMTCA 2255
>sp|D3YYI7|RN217_MOUSE Probable E3 ubiquitin-protein ligase RNF217 OS=Mus musculus
GN=Rnf217 PE=3 SV=2
Length = 515
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 83/198 (41%), Gaps = 29/198 (14%)
Query: 37 IFTCEICIEPISANDKFRNKDLCSHHFCQDCIAKYIEAKVQDNNTAKIECPGVHCDQFLD 96
+ C +C+E + + C C++C+ Y+ ++VQ +I+CP C +FL+
Sbjct: 233 VLMCRVCLE----DKPIKPLPCCKKAVCEECLKIYLSSQVQLGQV-EIKCPVTECFEFLE 287
Query: 97 PFSCKLMIPSNLFSKWCDVLFEDYVLGFER-----SYCPNRNCMALVVNGCEINYGTLKK 151
+ + NL + D + Y L R CP I + +
Sbjct: 288 ----ETTVVYNLTHE--DSIKYKYFLELGRIDSSTKPCPQCKHFTTFKKKGHIPTPSRSE 341
Query: 152 AR----CPNCTQWFCFQCKLAWHAGYRCEESGN----LRDW-NDIAFGKLVERMHWARCP 202
+R CP C +CF+C WH G C+E LR W ++I G+ + +CP
Sbjct: 342 SRYKIQCPTCQLIWCFKCHSPWHEGVNCKEYKKGDKLLRHWASEIEHGQ----RNAQKCP 397
Query: 203 ACGSCVERKEGCRVMYCS 220
C ++R EGC M CS
Sbjct: 398 KCKIHIQRTEGCDHMTCS 415
>sp|Q6NW85|ARI1L_DANRE E3 ubiquitin-protein ligase arih1l OS=Danio rerio GN=arih1l PE=2
SV=1
Length = 533
Score = 55.1 bits (131), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 72/168 (42%), Gaps = 15/168 (8%)
Query: 59 CSHHFCQDCIAKYIEAKVQDNNTAK-IECPGVHCDQFLDPFSC-KLMIPSNLFSKWCDVL 116
C H FC C Y+ K+ + + I CP +CD +D + +L+ S + K+ ++
Sbjct: 179 CGHKFCMQCWGDYLTTKIIEEGMGQTISCPAHNCDILVDDNTVMRLITDSKVKLKYQHLI 238
Query: 117 FEDYVL-GFERSYCPNRNCMALVVNGCEINYGTLKKARCPNCTQWFCFQCKLAWHAGYRC 175
+V +CP +C +V ++ Y K RC C + FCF C WH +C
Sbjct: 239 TNSFVECNRLLKWCPAPDCHHVV----KVQYPDAKPVRC-KCGRQFCFNCGENWHDPVKC 293
Query: 176 EESGNLRDW----NDIAFGKLVERMHWARCPACGSCVERKEGCRVMYC 219
+ LR W +D + + CP C +E+ GC M C
Sbjct: 294 KW---LRKWIKKCDDDSETSNWIAANTKECPKCHVTIEKDGGCNHMVC 338
>sp|Q6PFJ9|ARI1_DANRE E3 ubiquitin-protein ligase arih1 OS=Danio rerio GN=arih1 PE=2 SV=1
Length = 527
Score = 54.7 bits (130), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 71/168 (42%), Gaps = 15/168 (8%)
Query: 59 CSHHFCQDCIAKYIEAKVQDNNTAK-IECPGVHCDQFLDPFSC-KLMIPSNLFSKWCDVL 116
C H FC C Y+ K+ + + I CP CD +D + +L+ S + K+ ++
Sbjct: 173 CGHKFCMQCWGDYLTTKIIEEGMGQTISCPAHSCDILVDDNTVMRLITDSKVKLKYQHLI 232
Query: 117 FEDYVL-GFERSYCPNRNCMALVVNGCEINYGTLKKARCPNCTQWFCFQCKLAWHAGYRC 175
+V +CP +C +V ++ Y K RC C + FCF C WH +C
Sbjct: 233 TNSFVECNRLLKWCPAPDCHHVV----KVQYPDAKPVRC-KCGRQFCFNCGENWHDPVKC 287
Query: 176 EESGNLRDW----NDIAFGKLVERMHWARCPACGSCVERKEGCRVMYC 219
+ LR W +D + + CP C +E+ GC M C
Sbjct: 288 KW---LRKWIKKCDDDSETSNWIAANTKECPKCHVTIEKDGGCNHMVC 332
>sp|Q9Y4X5|ARI1_HUMAN E3 ubiquitin-protein ligase ARIH1 OS=Homo sapiens GN=ARIH1 PE=1
SV=2
Length = 557
Score = 54.3 bits (129), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 73/168 (43%), Gaps = 15/168 (8%)
Query: 59 CSHHFCQDCIAKYIEAKVQDNNTAK-IECPGVHCDQFLDPFSC-KLMIPSNLFSKWCDVL 116
C H FC C ++Y+ K+ + + I CP CD +D + +L+ S + K+ ++
Sbjct: 203 CGHKFCMQCWSEYLTTKIMEEGMGQTISCPAHGCDILVDDNTVMRLITDSKVKLKYQHLI 262
Query: 117 FEDYVL-GFERSYCPNRNCMALVVNGCEINYGTLKKARCPNCTQWFCFQCKLAWHAGYRC 175
+V +CP +C +V ++ Y K RC C + FCF C WH +C
Sbjct: 263 TNSFVECNRLLKWCPAPDCHHVV----KVQYPDAKPVRC-KCGRQFCFNCGENWHDPVKC 317
Query: 176 EESGNLRDW----NDIAFGKLVERMHWARCPACGSCVERKEGCRVMYC 219
+ L+ W +D + + CP C +E+ GC M C
Sbjct: 318 KW---LKKWIKKCDDDSETSNWIAANTKECPKCHVTIEKDGGCNHMVC 362
>sp|Q9Z1K5|ARI1_MOUSE E3 ubiquitin-protein ligase ARIH1 OS=Mus musculus GN=Arih1 PE=2
SV=3
Length = 555
Score = 54.3 bits (129), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 73/168 (43%), Gaps = 15/168 (8%)
Query: 59 CSHHFCQDCIAKYIEAKVQDNNTAK-IECPGVHCDQFLDPFSC-KLMIPSNLFSKWCDVL 116
C H FC C ++Y+ K+ + + I CP CD +D + +L+ S + K+ ++
Sbjct: 201 CGHKFCMQCWSEYLTTKIMEEGMGQTISCPAHGCDILVDDNTVMRLITDSKVKLKYQHLI 260
Query: 117 FEDYVL-GFERSYCPNRNCMALVVNGCEINYGTLKKARCPNCTQWFCFQCKLAWHAGYRC 175
+V +CP +C +V ++ Y K RC C + FCF C WH +C
Sbjct: 261 TNSFVECNRLLKWCPAPDCHHVV----KVQYPDAKPVRC-KCGRQFCFNCGENWHDPVKC 315
Query: 176 EESGNLRDW----NDIAFGKLVERMHWARCPACGSCVERKEGCRVMYC 219
+ L+ W +D + + CP C +E+ GC M C
Sbjct: 316 KW---LKKWIKKCDDDSETSNWIAANTKECPKCHVTIEKDGGCNHMVC 360
>sp|A2VEA3|ARI1_BOVIN E3 ubiquitin-protein ligase ARIH1 OS=Bos taurus GN=ARIH1 PE=2 SV=1
Length = 555
Score = 54.3 bits (129), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 73/168 (43%), Gaps = 15/168 (8%)
Query: 59 CSHHFCQDCIAKYIEAKVQDNNTAK-IECPGVHCDQFLDPFSC-KLMIPSNLFSKWCDVL 116
C H FC C ++Y+ K+ + + I CP CD +D + +L+ S + K+ ++
Sbjct: 201 CGHKFCMQCWSEYLTTKIMEEGMGQTISCPAHGCDILVDDNTVMRLITDSKVKLKYQHLI 260
Query: 117 FEDYVL-GFERSYCPNRNCMALVVNGCEINYGTLKKARCPNCTQWFCFQCKLAWHAGYRC 175
+V +CP +C +V ++ Y K RC C + FCF C WH +C
Sbjct: 261 TNSFVECNRLLKWCPAPDCHHVV----KVQYPDAKPVRC-KCGRQFCFNCGENWHDPVKC 315
Query: 176 EESGNLRDW----NDIAFGKLVERMHWARCPACGSCVERKEGCRVMYC 219
+ L+ W +D + + CP C +E+ GC M C
Sbjct: 316 KW---LKKWIKKCDDDSETSNWIAANTKECPKCHVTIEKDGGCNHMVC 360
>sp|B1H1E4|ARI1_XENTR E3 ubiquitin-protein ligase arih1 OS=Xenopus tropicalis GN=arih1
PE=2 SV=1
Length = 529
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 73/168 (43%), Gaps = 15/168 (8%)
Query: 59 CSHHFCQDCIAKYIEAKVQDNNTAK-IECPGVHCDQFLDPFSC-KLMIPSNLFSKWCDVL 116
C H FC C ++Y+ K+ + + I CP CD +D + +L+ S + K+ ++
Sbjct: 175 CGHKFCMQCWSEYLTTKIIEEGMGQTISCPAHGCDILVDDNTVMRLITDSKVKLKYQHLI 234
Query: 117 FEDYVL-GFERSYCPNRNCMALVVNGCEINYGTLKKARCPNCTQWFCFQCKLAWHAGYRC 175
+V +CP +C +V ++ Y K RC C + FCF C WH +C
Sbjct: 235 TNSFVECNRLLKWCPAPDCHHVV----KVQYPDAKPVRC-KCGRQFCFNCGENWHDPVKC 289
Query: 176 EESGNLRDW----NDIAFGKLVERMHWARCPACGSCVERKEGCRVMYC 219
+ L+ W +D + + CP C +E+ GC M C
Sbjct: 290 KW---LKKWIKKCDDDSETSNWIAANTKECPKCHVTIEKDGGCNHMVC 334
>sp|Q32NS4|ARI1_XENLA E3 ubiquitin-protein ligase arih1 OS=Xenopus laevis GN=arih1 PE=2
SV=1
Length = 529
Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 71/168 (42%), Gaps = 15/168 (8%)
Query: 59 CSHHFCQDCIAKYIEAKVQDNNTAK-IECPGVHCDQFLDPFSC-KLMIPSNLFSKWCDVL 116
C H FC C +Y+ K+ + + I CP CD +D + +L+ S + K+ ++
Sbjct: 175 CGHKFCMQCWGEYLTTKIIEEGMGQTISCPAHGCDILVDDNTVMRLITDSKVKLKYQHLI 234
Query: 117 FEDYVL-GFERSYCPNRNCMALVVNGCEINYGTLKKARCPNCTQWFCFQCKLAWHAGYRC 175
+V +CP +C +V ++ Y K C C + FCF C WH +C
Sbjct: 235 TNSFVECNRLLKWCPAPDCHHVV----KVQYPDAKPVHC-KCGRQFCFNCGENWHDPVKC 289
Query: 176 EESGNLRDW----NDIAFGKLVERMHWARCPACGSCVERKEGCRVMYC 219
+ LR W +D + + CP C +E+ GC M C
Sbjct: 290 KW---LRKWIKKCDDDSETSNWIAANTKECPKCHVTIEKDGGCNHMVC 334
>sp|P0CE10|Y4102_ARATH Putative uncharacterized protein At4g01020, chloroplastic
OS=Arabidopsis thaliana GN=At4g01020 PE=4 SV=1
Length = 1787
Score = 52.4 bits (124), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 88/223 (39%), Gaps = 17/223 (7%)
Query: 1 MRISQQKPIENRECILQQEKVHENPQQEIELEDTNGIFTCEICIEPISANDKFRNKDLCS 60
MR QK + E ++ + E P EIELE C IC+ + D + + CS
Sbjct: 1532 MRQEVQKMVN--ELAREKSALGEKPD-EIELE-------CPICLSEV---DDGYSLEGCS 1578
Query: 61 HHFCQDCIAKYIEAKVQDNNTAKIECPGVHCDQFLDPFSCKLMIPSNLFSKWCDVLFEDY 120
H FC+ C+ + EA +++ + I C + C + + ++ + +
Sbjct: 1579 HLFCKACLLEQFEASMRNFDAFPILCSHIDCGAPIVVADMRALLSQEKLDELISASLSAF 1638
Query: 121 VLGFERS--YCPNRNCMALVVNGCEINYGTLKKARCPNCTQWFCFQCKLAWHAGYRCEES 178
V + +C +C ++ G + C C C +C L +H CE
Sbjct: 1639 VTSSDGKLRFCSTPDCPSIYRVAGPQESG--EPFICGACHSETCTRCHLEYHPLITCERY 1696
Query: 179 GNLRDWNDIAFGKLVERMHWARCPACGSCVERKEGCRVMYCSC 221
++ D++ + CP C S +E+ +GC + C C
Sbjct: 1697 KKFKENPDLSLKDWAKGKDVKECPICKSTIEKTDGCNHLQCRC 1739
>sp|Q22431|ARI2_CAEEL Probable protein ariadne-2 OS=Caenorhabditis elegans GN=T12E12.1
PE=3 SV=2
Length = 482
Score = 52.0 bits (123), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 90/221 (40%), Gaps = 22/221 (9%)
Query: 11 NRECILQQEKVHENPQQEIELEDTNGIFTCEICIEPISANDKFRNKD--LCSHHFCQDCI 68
+R L++ + P+ + +L T + C + A D + C H FC+ C
Sbjct: 97 DRNDFLRKCHIDAKPEPKRKLSSTQSVLAKGYC--SVCAMDGYTELPHLTCGHCFCEHCW 154
Query: 69 AKYIEAKVQDNNTAKIECPGVHCDQFLDPFSCKLMIPSN---LFSKWCDVLFEDYVLGFE 125
++E+++ + ++IEC C+ + P L I N + K+ L D V
Sbjct: 155 KSHVESRLSEGVASRIECMESECEVYA-PSEFVLSIIKNSPVIKLKYERFLLRDMVNSHP 213
Query: 126 R-SYCPNRNCMALVVNGCEINYGTLKKARCPNCTQWFCFQCKLAWHAGYRCEESGNLRDW 184
+C C +++ E+ K+ C C FC +C +HA CE ++ W
Sbjct: 214 HLKFCVGNEC-PVIIRSTEVK---PKRVTCMQCHTSFCVKCGADYHAPTSCE---TIKQW 266
Query: 185 -----NDIAFGKLVERMHWARCPACGSCVERKEGCRVMYCS 220
+D + H CP C SC+E+ GC + C+
Sbjct: 267 MTKCADDSETANYIS-AHTKDCPQCHSCIEKAGGCNHIQCT 306
>sp|Q54CX4|Y5521_DICDI Uncharacterized protein DDB_G0292642 OS=Dictyostelium discoideum
GN=DDB_G0292642 PE=4 SV=2
Length = 903
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 86/208 (41%), Gaps = 24/208 (11%)
Query: 30 ELEDTNGIFT-------CEIC-IEPISANDKFRNKDLCSHHFCQDCIAKYIEAKVQDNNT 81
E+ED + T C+IC +E +N+ F + C H +C DCI +++ + +
Sbjct: 599 EMEDRKKVSTKLEEPVECKICYMEYDQSNEVFTLE--CDHVYCFDCITEHLRILITEGRV 656
Query: 82 AKIECPGVHCDQFLDPFSCKLMIPSNLFSKWCDVLFEDYVLGFERSYCPNRNCMALVVNG 141
I CP C + + ++ + K+ + +CP +C V G
Sbjct: 657 LDISCPHPQCKKEIKESEIYMLTNEKNWLKYQKFSMIASLKTEPIKWCPTPDCDTPVRGG 716
Query: 142 CEINYGTLKKARCPNCTQWFCFQCKLAWHAGYRC-EESGNLRDWND-------IAFGKLV 193
E N CP C+ FC+ C H G +C E+ L+ + A+ +
Sbjct: 717 SERN----PILNCPKCSNDFCWICGEYSHEGAKCGTEAMELQGRKNKSIESAATAYIDFL 772
Query: 194 E-RMHWAR-CPACGSCVERKEGCRVMYC 219
E H+ + CP C S +E+ +GC M C
Sbjct: 773 ESNKHFVKPCPTCKSHIEKHDGCNHMTC 800
>sp|Q9LVX0|ARI3_ARATH Probable E3 ubiquitin-protein ligase ARI3 OS=Arabidopsis thaliana
GN=ARI3 PE=2 SV=1
Length = 537
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 80/203 (39%), Gaps = 25/203 (12%)
Query: 31 LEDTNGIFTCEICIEP-ISANDKFRNKDLCSHHFCQDCIAKYIEAKVQDNNTAKIECPGV 89
L + C++C+E + +N R + C H FC DC + K+ + + +I C
Sbjct: 112 LVTSKKTMKCDVCMEDDLPSNVMTRME--CGHRFCNDCWIGHFTVKINEGESKRILCMAH 169
Query: 90 HCDQFLDPFSCKLMIPSNLFSKWCDVLFEDYVLGFER-SYCPNRNCMALVVNGCEINYGT 148
C D + ++ L ++ L E YV +CP++ + E +
Sbjct: 170 ECKAICDEDVVRKLVSPELADRYDRFLIESYVEDNNMVKWCPSKPHCGSAIRKIEDGHDV 229
Query: 149 LKKARCPNCTQWFCFQCKLAWHA----------GYRCEESGNLRDWNDIAFGKLVERMHW 198
++ C +C FCF C H+ +CE+ +W + +
Sbjct: 230 VEVG-C-SCGLQFCFSCLSESHSPCSCLMWKLWKKKCEDESETVNWITV---------NT 278
Query: 199 ARCPACGSCVERKEGCRVMYCSC 221
CP C +++++GC +M C C
Sbjct: 279 KLCPKCSKPIQKRDGCNLMTCKC 301
>sp|Q9FFN9|ARI13_ARATH Probable E3 ubiquitin-protein ligase ARI13 OS=Arabidopsis thaliana
GN=ARI13 PE=2 SV=1
Length = 536
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 82/194 (42%), Gaps = 20/194 (10%)
Query: 9 IENRECILQQ---EKVHENPQQEIELEDTNGIFTCEICIEPISANDKFRNKDLCSHHFCQ 65
+EN E +L + + V +P Q D I +C IC + D + CSH FC+
Sbjct: 58 VENNEKVLSESGLKPVVVDPNQ-----DLYKISSCGICFKTCDDGDYLISTPFCSHMFCK 112
Query: 66 DCIAKYIEAK--VQDNNTAKIECPGVHCDQFLDPFSCKLMIPSNLFSKWCDVLFEDYVLG 123
C KY+E + + +I CP C + P + + + + + + + Y+ G
Sbjct: 113 SCWRKYLEKNFYLVEKTQTRISCPHGACQAAVGPDTIQKLTVCDQ-EMYVEYILRSYIEG 171
Query: 124 ---FERSYCPNRNCMALVVNGCEINYGTLKKARCPN----CTQWFCFQCKLAWHAGYRCE 176
E YCP ++C ++ + + G ++ N C FC++C L H C
Sbjct: 172 NKVLEIKYCPAQDCNYVIEFHQKNHDGADQEDYGFNVVCLCGHIFCWRCMLESHKPVTCN 231
Query: 177 ESGN--LRDWNDIA 188
+ + RD N ++
Sbjct: 232 NASDWLFRDLNSLS 245
>sp|Q9LVW9|ARI4_ARATH Putative E3 ubiquitin-protein ligase ARI4 OS=Arabidopsis thaliana
GN=ARI4 PE=5 SV=2
Length = 529
Score = 48.9 bits (115), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/199 (21%), Positives = 77/199 (38%), Gaps = 25/199 (12%)
Query: 34 TNGIFTCEICIEPISANDKFRNKDLCSHHFCQDCIAKYIEAKVQDNNTAKIECPGVHCDQ 93
T C+IC+E + + C H FC DC ++ ++ + +I C C+
Sbjct: 113 TKKTMKCDICMEEDLSKYAMTRME-CGHRFCNDCWKEHFTVRINEGEGKRIRCMAYKCNT 171
Query: 94 FLDPFSCKLMIPSNLFSKWCDVLFEDYVLGFER-SYCPNRNCMALVVNGCEINYGTLKKA 152
D + ++ + L K+ L E YV +CP+ + + + G + +
Sbjct: 172 ICD--EARQLVSTELAEKFDRFLIESYVEDNNMVKWCPSTPHCGNAIRNIKDD-GDVDEV 228
Query: 153 RCPNCTQWFCFQCKLAWHA----------GYRCEESGNLRDWNDIAFGKLVERMHWARCP 202
C +C FCF C H+ +CE+ +W + + CP
Sbjct: 229 EC-SCGLQFCFSCLSESHSPCSCLMWKLWKKKCEDESETVNWMTV---------NTKLCP 278
Query: 203 ACGSCVERKEGCRVMYCSC 221
C +++++GC M C C
Sbjct: 279 KCSKPIQKRDGCNHMTCKC 297
>sp|Q9NV58|RN19A_HUMAN E3 ubiquitin-protein ligase RNF19A OS=Homo sapiens GN=RNF19A PE=1
SV=3
Length = 838
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 62/140 (44%), Gaps = 22/140 (15%)
Query: 49 ANDKFRNKDLCSHHFCQDCIAKYIEAKVQDNNTAKIECPGVHCDQFLDPFSCKLMIPSN- 107
+ D+F + C H C DC+ +Y+ ++ ++ I CP C + +P +L++ +
Sbjct: 140 SKDRFPDIMTCHHRSCVDCLRQYLRIEISESRV-NISCP--ECTERFNPHDIRLILSDDV 196
Query: 108 LFSKWCDVLFEDYVLGFER-SYCPNRNC-MALVVNGCEINYGTLKKARCP-------NCT 158
L K+ + + +++ +CP +C A++ GC A CP C
Sbjct: 197 LMEKYEEFMLRRWLVADPDCRWCPAPDCGYAVIAFGC---------ASCPKLTCGREGCG 247
Query: 159 QWFCFQCKLAWHAGYRCEES 178
FC+ CK WH C+ +
Sbjct: 248 TEFCYHCKQIWHPNQTCDAA 267
>sp|P50636|RN19A_MOUSE E3 ubiquitin-protein ligase RNF19A OS=Mus musculus GN=Rnf19a PE=1
SV=2
Length = 840
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 62/140 (44%), Gaps = 22/140 (15%)
Query: 49 ANDKFRNKDLCSHHFCQDCIAKYIEAKVQDNNTAKIECPGVHCDQFLDPFSCKLMIPSN- 107
+ D+F + C H C DC+ +Y+ ++ ++ I CP C + +P +L++ +
Sbjct: 140 SKDRFPDIMTCHHRSCVDCLRQYLRIEISESRV-NISCP--ECTERFNPHDIRLILSDDV 196
Query: 108 LFSKWCDVLFEDYVLGFER-SYCPNRNC-MALVVNGCEINYGTLKKARCP-------NCT 158
L K+ + + +++ +CP +C A++ GC A CP C
Sbjct: 197 LMEKYEEFMLRRWLVADPDCRWCPAPDCGYAVIAFGC---------ASCPKLTCGREGCG 247
Query: 159 QWFCFQCKLAWHAGYRCEES 178
FC+ CK WH C+ +
Sbjct: 248 TEFCYHCKQIWHPNQTCDAA 267
>sp|A2A7Q9|RN19B_MOUSE E3 ubiquitin-protein ligase RNF19B OS=Mus musculus GN=Rnf19b PE=1
SV=2
Length = 732
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 55/128 (42%), Gaps = 22/128 (17%)
Query: 59 CSHHFCQDCIAKYIEAKVQDNNTAKIECPGVHCDQFLDPFSCKLMIP-SNLFSKWCDVLF 117
C H C+DC+ Y+ ++ ++ I CP C + L+P +L++ L K+ + +
Sbjct: 134 CPHRSCRDCLRHYLRLEISESRV-PISCP--ECSERLNPHDIRLLLADPPLMHKYEEFML 190
Query: 118 EDYVLGFER-SYCPNRNC-MALVVNGCEINYGTLKKARCP-------NCTQWFCFQCKLA 168
Y+ +CP +C A++ GC A CP C FC+ CK
Sbjct: 191 RRYLASDPDCRWCPAPDCGYAVIAYGC---------ASCPKLTCEREGCQTEFCYHCKQI 241
Query: 169 WHAGYRCE 176
WH C+
Sbjct: 242 WHPNQTCD 249
>sp|Q6ZMZ0|RN19B_HUMAN E3 ubiquitin-protein ligase RNF19B OS=Homo sapiens GN=RNF19B PE=1
SV=2
Length = 732
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 55/128 (42%), Gaps = 22/128 (17%)
Query: 59 CSHHFCQDCIAKYIEAKVQDNNTAKIECPGVHCDQFLDPFSCKLMIP-SNLFSKWCDVLF 117
C H C+DC+ Y+ ++ ++ I CP C + L+P +L++ L K+ + +
Sbjct: 137 CPHRSCRDCLRHYLRLEISESRV-PISCP--ECSERLNPHDIRLLLADPPLMHKYEEFML 193
Query: 118 EDYVLGFER-SYCPNRNC-MALVVNGCEINYGTLKKARCP-------NCTQWFCFQCKLA 168
Y+ +CP +C A++ GC A CP C FC+ CK
Sbjct: 194 RRYLASDPDCRWCPAPDCGYAVIAYGC---------ASCPKLTCEREGCQTEFCYHCKQI 244
Query: 169 WHAGYRCE 176
WH C+
Sbjct: 245 WHPNQTCD 252
>sp|Q2VJ60|RN19A_PIG E3 ubiquitin-protein ligase RNF19A OS=Sus scrofa GN=RNF19A PE=2
SV=1
Length = 838
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 61/140 (43%), Gaps = 22/140 (15%)
Query: 49 ANDKFRNKDLCSHHFCQDCIAKYIEAKVQDNNTAKIECPGVHCDQFLDPFSCKLMIPSN- 107
+ D+F C H C DC+ +Y+ ++ ++ I CP C + +P +L++ +
Sbjct: 140 SKDRFPEIMTCHHRSCVDCLRQYLRIEISESRV-NISCP--ECTERFNPHDIRLILSDDV 196
Query: 108 LFSKWCDVLFEDYVLGFER-SYCPNRNC-MALVVNGCEINYGTLKKARCP-------NCT 158
L K+ + + +++ +CP +C A++ GC A CP C
Sbjct: 197 LMEKYEEFMLRRWLVADPDCRWCPAPDCGYAVIAFGC---------ASCPKLTCGREGCG 247
Query: 159 QWFCFQCKLAWHAGYRCEES 178
FC+ CK WH C+ +
Sbjct: 248 TEFCYHCKQIWHPNQTCDAA 267
>sp|Q9WUB0|HOIL1_MOUSE RanBP-type and C3HC4-type zinc finger-containing protein 1 OS=Mus
musculus GN=Rbck1 PE=1 SV=2
Length = 508
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 93/223 (41%), Gaps = 42/223 (18%)
Query: 27 QEIELEDTNGIFT-----CEICIEPISANDKFRNKDLCSHHFCQDCIAKYIEAKVQDNNT 81
Q ++LE + + C +C ++ + ++ C H FC++C+ + ++++
Sbjct: 262 QHVQLEQRSLVLNTEPTECPVCYSVLAPGEAVVLRE-CLHTFCRECL----QGTIRNSQE 316
Query: 82 AKIECPGVHCDQFLDP-FSCKLMIPSNLFSKWCDVLF--EDY--VLGFERSYCPNRN--- 133
A++ CP F+D +SC P L + L EDY L S NR+
Sbjct: 317 AEVACP------FIDSTYSC----PGKLLEREIRALLSPEDYQRFLDLGVSIAENRSTLS 366
Query: 134 --CMALVVNGCEINYGTLKKARCPNCTQWFCFQCKLAWHAGYRCEESGN---LRDWNDIA 188
C G + + CP CT+ C CK A H C E + LR ND+A
Sbjct: 367 YHCKTPDCRGWCFFEDDVNEFTCPVCTRVNCLLCK-AIHEHMNCREYQDDLALRAQNDVA 425
Query: 189 FGKLVERM-------HWARCPACGSCVERKEGCRVMYCS-CHS 223
+ E + CP C V++K+GC + C+ CH+
Sbjct: 426 ARQTTEMLKVMLQQGEAMHCPQCRIVVQKKDGCDWIRCTVCHT 468
>sp|Q84RQ8|ARI15_ARATH Probable E3 ubiquitin-protein ligase ARI15 OS=Arabidopsis thaliana
GN=ARI15 PE=2 SV=1
Length = 452
Score = 45.8 bits (107), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 69/161 (42%), Gaps = 17/161 (10%)
Query: 45 EPISANDKFRNKDLCSHHFCQDCIAKYIEA---KVQDNNTAKIECPGVHCDQFLDPFSCK 101
+ + + + CSH FC+ C +KY++ V+ N+TA I CP C + P + +
Sbjct: 40 DAVVVDGDLISTPFCSHKFCKACWSKYLKKNFFSVEKNHTA-ISCPDRDCRAAVGPETVE 98
Query: 102 LMIPSN--LFSKWCDVLFEDYVLGFERSYCPNRNCMALVVNGCEINYGTLKKARCPN--- 156
+ + ++ + + + LG++ CP R C ++ E + + + N
Sbjct: 99 KLTVRDQAMYELYILKSYREKYLGWKLKLCPARGCNYVI----EFHLASEDEEHSLNIVC 154
Query: 157 -CTQWFCFQCKLAWHAGYRCEESGNLRDWNDIAFGKLVERM 196
C FC++C L H C N DW KL+E +
Sbjct: 155 LCGHIFCWRCMLESHRPVTC---NNASDWLSRDLEKLIEEV 192
>sp|Q94981|ARI1_DROME Protein ariadne-1 OS=Drosophila melanogaster GN=ari-1 PE=1 SV=2
Length = 503
Score = 45.4 bits (106), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 75/187 (40%), Gaps = 17/187 (9%)
Query: 40 CEICIEPISANDKFRNKDLCSHHFCQDCIAKYIEAKVQDNNTAK-IECPGVHCDQFLDPF 98
CEIC + + + C H FC C +Y+ K+ + I C CD +D
Sbjct: 133 CEICFSQLPPDSMAGLE--CGHRFCMPCWHEYLSTKIVAEGLGQTISCAAHGCDILVDDV 190
Query: 99 S-CKLMIPSNLFSKWCDVLFEDYVLGFE-RSYCPNRNCMALVVNGCEINYGTLKKARCPN 156
+ L+ + + K+ ++ +V + +CP+ +C V ++ Y ++ C
Sbjct: 191 TVANLVTDARVRVKYQQLITNSFVECNQLLRWCPSVDCTYAV----KVPYAEPRRVHC-K 245
Query: 157 CTQWFCFQCKLAWHAGYRCEESGNLRDW----NDIAFGKLVERMHWARCPACGSCVERKE 212
C FCF C WH +C L+ W +D + + CP C +E+
Sbjct: 246 CGHVFCFACGENWHDPVKCRW---LKKWIKKCDDDSETSNWIAANTKECPRCSVTIEKDG 302
Query: 213 GCRVMYC 219
GC M C
Sbjct: 303 GCNHMVC 309
>sp|Q8TC41|RN217_HUMAN Probable E3 ubiquitin-protein ligase RNF217 OS=Homo sapiens
GN=RNF217 PE=2 SV=3
Length = 275
Score = 45.1 bits (105), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 9/75 (12%)
Query: 151 KARCPNCTQWFCFQCKLAWHAGYRCEESGN----LRDW-NDIAFGKLVERMHWARCPACG 205
K +CP C +CF+C WH G C+E LR W ++I G+ + +CP C
Sbjct: 80 KIQCPTCQFVWCFKCHSPWHEGVNCKEYKKGDKLLRHWASEIEHGQ----RNAQKCPKCK 135
Query: 206 SCVERKEGCRVMYCS 220
++R EGC M CS
Sbjct: 136 IHIQRTEGCDHMTCS 150
>sp|Q1L8L6|RN19B_DANRE E3 ubiquitin-protein ligase RNF19B OS=Danio rerio GN=rnf19b PE=3
SV=2
Length = 701
Score = 45.1 bits (105), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 81/190 (42%), Gaps = 31/190 (16%)
Query: 37 IFTCEICIEPISANDKFRNKDLCSHHFCQDCIAKYIEAKVQDNNTAKIECPGVHCDQFLD 96
+ C +C+ A ++ CSH C C+ +Y+ ++ ++ ++ CP C + L
Sbjct: 104 LLECPLCLVRQPA-EQLPELQGCSHRSCLCCLRQYLRIEITESRV-QLSCP--ECAERLA 159
Query: 97 PFSCKLMIP-SNLFSKWCDVLFEDYVLGFER-SYCPNRNC-MALVVNGCEINYGTLKKAR 153
P+ L++ NL K+ + L + +CP +C A++ +GC A
Sbjct: 160 PWQVALILDDPNLMEKYEEFLLRRCLASDPDCRWCPAPDCGFAVIASGC---------AS 210
Query: 154 CP-------NCTQWFCFQCKLAWHAGYRCEESG-----NLRDWNDIAFGKLVERMHW--- 198
CP C FC+ CK AWH C+ + +LR ++ + E+ H
Sbjct: 211 CPRLVCRREGCGAEFCYHCKQAWHPNQTCDSARQQRALSLRTHSNHSPSYTAEQGHTDDI 270
Query: 199 ARCPACGSCV 208
CP CG+ +
Sbjct: 271 KPCPRCGAYI 280
>sp|Q9P3U4|YKX2_SCHPO Uncharacterized RING finger protein C328.02 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPAC328.02 PE=3 SV=1
Length = 504
Score = 44.7 bits (104), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/230 (20%), Positives = 93/230 (40%), Gaps = 35/230 (15%)
Query: 6 QKPIENRECILQQEKVHENPQQEIELEDTNGIFTCEICIE----PISANDKFRNKDLCSH 61
++ I+ E LQ+ V + ++ E+ G TCEIC + P + + C H
Sbjct: 99 ERYIDAPEESLQKAGVGLSGSKQREVVHHEG--TCEICYDEGCLPFFSAE-------CDH 149
Query: 62 HFCQDCIAKYIEAKVQDNNTAKIECPGVHCDQFLDPFSCKLMIPSNLFSKWCDVLFEDYV 121
FC C +Y+++++ + + I+CP C Q + S ++ ++ +L +V
Sbjct: 150 EFCLACYRQYLDSRISEGESV-IQCPEESCTQIVSIQSITKVLDEKSLDRYHRLLDRSFV 208
Query: 122 LGFER-SYCPNRNC-MALVVNGCEINYGTLKKARCPNCTQWFCFQCKLAWHAGY------ 173
+ +CP +C A+ + + + ++ NC + FCF C H
Sbjct: 209 DDNDHLRWCPAPDCEFAIECHVTQASLSSVVPTVTCNCGKQFCFGCGHDNHQPTICPLVK 268
Query: 174 ----RCEESGNLRDWNDIAFGKLVERMHWARCPACGSCVERKEGCRVMYC 219
+C++ +W + CP C + +E+ GC M C
Sbjct: 269 IWLQKCQDDSETANWI---------HANTKECPKCSTTIEKNGGCNHMTC 309
>sp|Q9SKC3|ARI9_ARATH Probable E3 ubiquitin-protein ligase ARI9 OS=Arabidopsis thaliana
GN=ARI9 PE=2 SV=1
Length = 543
Score = 44.7 bits (104), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 77/191 (40%), Gaps = 20/191 (10%)
Query: 40 CEICIEPISANDKFRNKDLCSHHFCQDCIAKYIEAKVQDNNT-AKIECPGVHCDQFLDPF 98
C IC E + + R C H +C+ C A YI K++D +++CP C +
Sbjct: 128 CGICFESYTREEIARVS--CGHPYCKTCWAGYITTKIEDGPGCLRVKCPEPSCSAAVGKD 185
Query: 99 SCKLMIPSNLFSKWCDVLFEDYVL-GFERSYCPNRNCMALVVNGCEINYGTLKKARCPN- 156
+ + + + K+ + YV G + +CP+ C G + +G + +
Sbjct: 186 MIEDVTETKVNEKYSRYILRSYVEDGKKIKWCPSPGC------GYAVEFGGSESSSYDVS 239
Query: 157 --CTQWFCFQCKLAWHAGYRCEESGNLRDW----NDIAFGKLVERMHWARCPACGSCVER 210
C+ FC+ C H+ C+ + W D + K + CP C +E+
Sbjct: 240 CLCSYRFCWNCSEDAHSPVDCD---TVSKWIFKNQDESENKNWMLANSKPCPECKRPIEK 296
Query: 211 KEGCRVMYCSC 221
+GC M CS
Sbjct: 297 NDGCNHMTCSA 307
>sp|E6ZIJ1|HOIL1_DICLA RanBP-type and C3HC4-type zinc finger-containing protein 1
OS=Dicentrarchus labrax GN=rbck1 PE=3 SV=1
Length = 707
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 99/253 (39%), Gaps = 52/253 (20%)
Query: 2 RISQQKPIENRECILQQEKVHENPQQE----IELEDTNGIFT------CEICIEPISAND 51
RI Q+K E I Q ++ E ++E + + D+ + C IC + +
Sbjct: 436 RIQQEK-----EAIRQYQQAREEERRENFARLVMMDSQDLLPNPEPVDCRICYMDLQPGE 490
Query: 52 KFRNKDLCSHHFCQDCIAKYIEAKVQDNNTAKIECPGVHCDQFLDPFSC---------KL 102
++ C H FC++C+ I E P V C D +SC +
Sbjct: 491 GVLLRE-CLHCFCRECLRSVIMLS---------EEPEVSCPYRDDTYSCACSLQEREIRA 540
Query: 103 MIPSNLFSKWCDVLFEDYVLGFERSY-CPNRNCMALVVNGCEINYGTLKKARCPNCTQWF 161
++P+ + +W E SY C +C+ V +N CP C +
Sbjct: 541 LVPAEEYERWLQRGLSVAESRCEGSYHCATPDCLGWCVYEDTVNV-----FHCPVCRKHN 595
Query: 162 CFQCKLAWHAGYRCEESGN---LRDWNDIA-------FGKLVERMHWARCPACGSCVERK 211
C CK + H G C++ + R ND A LV+ CP CG V+++
Sbjct: 596 CLICK-SIHEGMNCKQYQDDLAARAINDSAARRTTQLLKTLVQSGEAMHCPQCGIIVQKR 654
Query: 212 EGCRVMYCS-CHS 223
+GC + C+ CH+
Sbjct: 655 DGCDWLRCTVCHT 667
>sp|Q9SKC2|ARI11_ARATH Probable E3 ubiquitin-protein ligase ARI11 OS=Arabidopsis thaliana
GN=ARI11 PE=2 SV=1
Length = 542
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 75/199 (37%), Gaps = 19/199 (9%)
Query: 33 DTNGI---FTCEICIEPISANDKFRNKDLCSHHFCQDCIAKYIEAKVQDNNT-AKIECPG 88
D NG C IC E + + R C H +C+ C YI K++D +++CP
Sbjct: 129 DVNGTEVDIQCGICFESYTRKEIARVS--CGHPYCKTCWTGYITTKIEDGPGCLRVKCPE 186
Query: 89 VHCDQFLDPFSCKLMIPSNLFSKWCDVLFEDYVL-GFERSYCPNRNCMALVVNGCEINYG 147
C + + K+ YV G + +CP+ C V G +N
Sbjct: 187 PSCYAVVGQDMIDEVTEKKDKDKYYRYFLRSYVEDGKKMKWCPSPGCEYAVEFG--VNGS 244
Query: 148 TLKKARCPNCTQWFCFQCKLAWHAGYRCEESGNLRDWNDIAFGKLVERMHW-----ARCP 202
+ C C+ FC+ C H+ CE + W + E M+W CP
Sbjct: 245 SSYDVSCL-CSYKFCWNCCEDAHSPVDCE---TVSKWL-LKNKDESENMNWILAKTKPCP 299
Query: 203 ACGSCVERKEGCRVMYCSC 221
C +E+ GC M CS
Sbjct: 300 KCKRPIEKNTGCNHMSCSA 318
>sp|A9JTG5|HOIL1_DANRE RanBP-type and C3HC4-type zinc finger-containing protein 1 OS=Danio
rerio GN=rbck1 PE=2 SV=1
Length = 714
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 96/247 (38%), Gaps = 40/247 (16%)
Query: 2 RISQQKPIENRECILQQEKVHENPQQE-----IELEDTNGI-----FTCEICIEPISAND 51
RI Q+K E I Q ++ E ++E ++++ + + C IC + + +
Sbjct: 443 RIQQEK-----EAIRQYQQARETERRENFARLVQMDGQDLVPNPERVECRICYVELESGE 497
Query: 52 KFRNKDLCSHHFCQDCIAKYIEAKVQDNNTAKIECP----GVHCDQFLDPFSCKLMIPSN 107
++ C H FC++C+ I + ++ CP CD L + ++ +
Sbjct: 498 GVLLRE-CLHCFCKECLRSVILM----SEDPQVACPYRDESYACDCVLQEREIRALVSVD 552
Query: 108 LFSKWCDVLFEDYVLGFERSYCPNRNCMALVVNGCEINYGTLKKARCPNCTQWFCFQCKL 167
+ W E SY +C G + T+ CP C + C CK
Sbjct: 553 DYQHWLQRGLSVAESRCEGSY----HCATADCPGWCVYEDTVNTFHCPVCKKQNCLLCK- 607
Query: 168 AWHAGYRC---EESGNLRDWNDIA-------FGKLVERMHWARCPACGSCVERKEGCRVM 217
A H G C ++ R ND A LV CP CG V++KEGC +
Sbjct: 608 AIHEGMNCKQYQDDLTARAINDSAARRTRDLLKTLVNSGEAMHCPQCGIIVQKKEGCDWL 667
Query: 218 YCS-CHS 223
C+ CH+
Sbjct: 668 RCTVCHT 674
>sp|Q96EP0|RNF31_HUMAN E3 ubiquitin-protein ligase RNF31 OS=Homo sapiens GN=RNF31 PE=1
SV=1
Length = 1072
Score = 43.1 bits (100), Expect = 0.002, Method: Composition-based stats.
Identities = 30/97 (30%), Positives = 42/97 (43%), Gaps = 17/97 (17%)
Query: 151 KARCPNCTQWFCFQCKLAW---HAGYRCEESGNLRDWNDIAFGKLVERMHWAR----CPA 203
+A CP C Q FC +CK W H G CE+ N + ND + M+ CP
Sbjct: 814 EATCPQCHQTFCVRCKRQWEEQHRGRSCEDFQNWKRMNDPEYQAQGLAMYLQENGIDCPK 873
Query: 204 C--------GSCVE-RKEGCRVMYCS-CHSVTYSRAK 230
C G C+ CR +CS C++ Y++ K
Sbjct: 874 CKFSYALARGGCMHFHCTQCRHQFCSGCYNAFYAKNK 910
>sp|Q62921|HOIL1_RAT RanBP-type and C3HC4-type zinc finger-containing protein 1
OS=Rattus norvegicus GN=Rbck1 PE=1 SV=3
Length = 508
Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 92/223 (41%), Gaps = 42/223 (18%)
Query: 27 QEIELEDTNGIFT-----CEICIEPISANDKFRNKDLCSHHFCQDCIAKYIEAKVQDNNT 81
Q ++LE + + C +C ++ + ++ C H FC++C+ + ++++
Sbjct: 262 QHVQLEQRSLVLNTEPAECPVCYSVLAPGEAVVLRE-CLHTFCRECL----QGTIRNSQE 316
Query: 82 AKIECPGVHCDQFLD-PFSCKLMIPSNLFSKWCDVLF--EDY--VLGFERSYCPNRN--- 133
A++ CP F+D +SC P L + L EDY L S NR+
Sbjct: 317 AEVSCP------FIDNTYSC----PGKLLEREIRALLSPEDYQRFLDLGVSIAENRSTLS 366
Query: 134 --CMALVVNGCEINYGTLKKARCPNCTQWFCFQCKLAWHAGYRCEESGN---LRDWNDIA 188
C G + + CP CT+ C CK A H C E + R ND+A
Sbjct: 367 YHCKTPDCRGWCFFEDDVNEFTCPVCTRVNCLLCK-AIHERMNCREYQDDLAHRARNDVA 425
Query: 189 FGKLVERM-------HWARCPACGSCVERKEGCRVMYCS-CHS 223
+ E + CP C V++K+GC + C+ CH+
Sbjct: 426 AQQTTEMLRVMLQQGEAMYCPQCRIVVQKKDGCDWIRCTVCHT 468
>sp|Q924T7|RNF31_MOUSE E3 ubiquitin-protein ligase RNF31 OS=Mus musculus GN=Rnf31 PE=1
SV=2
Length = 1066
Score = 42.4 bits (98), Expect = 0.004, Method: Composition-based stats.
Identities = 30/97 (30%), Positives = 42/97 (43%), Gaps = 17/97 (17%)
Query: 151 KARCPNCTQWFCFQCKLAW---HAGYRCEESGNLRDWNDIAFGKLVERMHWAR----CPA 203
+A CP C Q FC +CK W H G CE+ N + ND + M+ CP
Sbjct: 808 EATCPQCHQTFCVRCKRQWEEQHRGRSCEDFQNWKRTNDPEYQAQGLAMYLQENGIDCPK 867
Query: 204 C--------GSCVE-RKEGCRVMYCS-CHSVTYSRAK 230
C G C+ CR +CS C++ Y++ K
Sbjct: 868 CKFSYALARGGCMHFHCTQCRHQFCSGCYNAFYAKNK 904
>sp|Q9BYM8|HOIL1_HUMAN RanBP-type and C3HC4-type zinc finger-containing protein 1 OS=Homo
sapiens GN=RBCK1 PE=1 SV=2
Length = 510
Score = 42.0 bits (97), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 84/205 (40%), Gaps = 37/205 (18%)
Query: 40 CEICIEPISANDKFRNKDLCSHHFCQDCIAKYIEAKVQDNNTAKIECPGVHCDQFLD-PF 98
C +C ++ + ++ C H FC++C+ + ++++ A++ CP F+D +
Sbjct: 282 CPVCYSVLAPGEAVVLRE-CLHTFCRECL----QGTIRNSQEAEVSCP------FIDNTY 330
Query: 99 SCKLMIPSNLFSKWCDVLF--EDY--VLGFERSYCPNRN-----CMALVVNGCEINYGTL 149
SC L + L EDY L S NR+ C G +
Sbjct: 331 SCS----GKLLEREIKALLTPEDYQRFLDLGISIAENRSAFSYHCKTPDCKGWCFFEDDV 386
Query: 150 KKARCPNCTQWFCFQCKLAWHAGYRC---EESGNLRDWNDIAFGKLVERM-------HWA 199
+ CP C C CK A H C +E LR ND+A + E +
Sbjct: 387 NEFTCPVCFHVNCLLCK-AIHEQMNCKEYQEDLALRAQNDVAARQTTEMLKVMLQQGEAM 445
Query: 200 RCPACGSCVERKEGCRVMYCS-CHS 223
RCP C V++K+GC + C+ CH+
Sbjct: 446 RCPQCQIVVQKKDGCDWIRCTVCHT 470
>sp|Q6T486|RBRA_DICDI Probable E3 ubiquitin-protein ligase rbrA OS=Dictyostelium
discoideum GN=rbrA PE=3 SV=1
Length = 520
Score = 42.0 bits (97), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 79/193 (40%), Gaps = 12/193 (6%)
Query: 33 DTNGIFTCEICIEPISANDKFRNKDLCSHHFCQDCIAKYIEAKVQDNNT-AKIECPGVHC 91
+ +G +C IC+E F +C+H +C C Y+E KV + CP C
Sbjct: 132 EKSGNVSCLICLEDYPPTQTFAL--ICNHRYCLPCYKNYLEIKVSEGPECIYTPCPAPKC 189
Query: 92 DQFLDPFSCKLMIPSNLFSKWCDVLFEDYVLGFER-SYCPNRNCMALVVNGCEINYGTLK 150
+ + K ++ +F ++ + + + YV + +CP C+ + + K
Sbjct: 190 KVIVHQDAFKQIVSPEVFERFNNFILKSYVDDNPQVKWCPAPGCIYSI----RCDRKERK 245
Query: 151 KARCPNCTQWFCFQC---KLAWHAGYRCEESGN-LRDWNDIAFGKLVERMHWARCPACGS 206
+A C +CF C ++ H C + L+ +D + + +CP C S
Sbjct: 246 EAVNCKCGFQYCFNCNDYEIGDHMPCPCSQVDKWLQKASDESENVTWMLANTKKCPECRS 305
Query: 207 CVERKEGCRVMYC 219
+E+ GC M C
Sbjct: 306 PIEKNGGCMHMTC 318
>sp|P58283|RN216_MOUSE E3 ubiquitin-protein ligase RNF216 OS=Mus musculus GN=Rnf216 PE=1
SV=3
Length = 853
Score = 41.6 bits (96), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 79/173 (45%), Gaps = 21/173 (12%)
Query: 60 SHHFCQDCIAKYIEAKVQDNNTAKIECPGVHCDQFLDPFSCKLMIPSNLFSKWCDVLFED 119
+H FC++C+ +Y + V + +++ C C + ++P + K+ + E+
Sbjct: 521 AHLFCKECLIRYAQEAVFGSGKSELSCMEGSCTCSFPTSELEKVLPQTILYKYYERKAEE 580
Query: 120 YVLGFERSY---CPNRNCMALVVNGCEINYGTLKKARCPN--CTQWFCFQCKLAW--HAG 172
V CP+ + AL+ + +K+ CPN C + C +C+ W H G
Sbjct: 581 EVAAAYADELVRCPSCSFPALLDS-------DVKRFSCPNPRCRKETCRKCQGLWKEHNG 633
Query: 173 YRCEESGNLRDWNDIAF-GKLVERMHWAR---CPACGSCVERKEGCRVMYCSC 221
CEE L + +DI + + E+M AR C CG+ + + EGC M C C
Sbjct: 634 LTCEE---LAEKDDIKYRTSIEEKMTAARIRKCHKCGTGLIKSEGCNRMSCRC 683
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.137 0.473
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 103,845,898
Number of Sequences: 539616
Number of extensions: 4319303
Number of successful extensions: 12873
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 121
Number of HSP's that attempted gapping in prelim test: 12660
Number of HSP's gapped (non-prelim): 221
length of query: 268
length of database: 191,569,459
effective HSP length: 115
effective length of query: 153
effective length of database: 129,513,619
effective search space: 19815583707
effective search space used: 19815583707
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 60 (27.7 bits)