Query 043606
Match_columns 101
No_of_seqs 106 out of 676
Neff 5.6
Searched_HMMs 29240
Date Mon Mar 25 11:02:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043606.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/043606hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3u5c_O RP59A, 40S ribosomal pr 100.0 1.7E-46 6E-51 265.6 9.9 101 1-101 37-137 (137)
2 2xzm_K RPS14E; ribosome, trans 100.0 4.3E-45 1.5E-49 262.0 11.1 101 1-101 51-151 (151)
3 3j20_M 30S ribosomal protein S 100.0 1.2E-42 4E-47 246.0 12.0 100 1-101 37-137 (137)
4 3r8n_K 30S ribosomal protein S 100.0 6.4E-41 2.2E-45 231.6 10.8 88 2-98 30-117 (117)
5 2vqe_K 30S ribosomal protein S 100.0 2.3E-40 7.9E-45 232.1 8.9 88 2-98 40-127 (129)
6 3bbn_K Ribosomal protein S11; 100.0 1.1E-39 3.8E-44 231.4 6.6 89 1-98 52-140 (140)
7 4e0a_A BH1408 protein; structu 86.0 4.2 0.00014 25.0 7.0 57 19-87 102-158 (164)
8 3v2d_S 50S ribosomal protein L 84.6 1.3 4.6E-05 29.6 4.2 49 20-75 62-111 (112)
9 3r8s_O 50S ribosomal protein L 82.2 1.5 5.1E-05 29.3 3.7 50 19-75 65-115 (116)
10 1vq8_N 50S ribosomal protein L 80.0 2.8 9.4E-05 30.4 4.8 61 19-93 77-138 (187)
11 2zjr_L 50S ribosomal protein L 79.2 1.2 4.3E-05 29.8 2.5 49 21-76 65-114 (114)
12 1ovy_A 50S ribosomal protein L 73.8 2.8 9.6E-05 28.2 3.1 51 19-75 69-119 (120)
13 1rfm_A L-sulfolactate dehydrog 73.1 23 0.00077 27.4 8.6 73 11-92 78-152 (344)
14 3eo4_A Uncharacterized protein 72.7 15 0.0005 22.9 6.8 51 18-80 103-153 (164)
15 1xrh_A Ureidoglycolate dehydro 72.1 29 0.00099 26.9 9.0 72 12-92 81-154 (351)
16 3j21_O 50S ribosomal protein L 71.5 1 3.6E-05 33.1 0.6 57 20-93 79-139 (203)
17 3f8k_A Protein acetyltransfera 71.3 14 0.00048 22.7 5.9 48 20-79 88-135 (160)
18 3uoe_A Dehydrogenase; structur 70.7 31 0.0011 26.9 8.9 73 11-92 101-175 (357)
19 1v9n_A Malate dehydrogenase; r 69.7 37 0.0013 26.4 9.7 73 11-92 89-163 (360)
20 3pzj_A Probable acetyltransfer 69.3 21 0.00071 23.6 6.8 51 18-80 132-182 (209)
21 2ge3_A Probable acetyltransfer 69.0 19 0.00063 22.6 6.6 51 20-82 100-150 (170)
22 3i0p_A Malate dehydrogenase; a 68.9 34 0.0012 26.6 8.8 73 11-92 85-159 (365)
23 4h8a_A Ureidoglycolate dehydro 68.9 38 0.0013 26.1 9.9 73 11-92 80-154 (339)
24 1nxu_A Hypothetical oxidoreduc 68.4 38 0.0013 26.0 9.8 73 11-92 78-152 (333)
25 1vhs_A Similar to phosphinothr 68.4 19 0.00064 23.1 6.3 50 19-80 95-144 (175)
26 2jlm_A Putative phosphinothric 68.1 22 0.00074 23.1 7.1 49 19-79 104-152 (182)
27 1z2i_A Malate dehydrogenase; s 68.0 40 0.0014 26.1 9.5 73 11-92 87-161 (358)
28 3g8w_A Lactococcal prophage PS 67.5 19 0.00066 22.2 7.1 50 19-80 95-144 (169)
29 1wtj_A Ureidoglycolate dehydro 67.1 41 0.0014 25.9 9.4 73 11-92 88-162 (343)
30 2x06_A L-sulfolactate dehydrog 66.7 38 0.0013 26.2 8.6 73 11-92 78-152 (344)
31 2j8m_A Acetyltransferase PA486 66.2 22 0.00075 22.4 7.2 50 18-79 95-144 (172)
32 3bbo_Q Ribosomal protein L18; 66.1 1.6 5.4E-05 31.1 0.6 50 19-75 110-160 (161)
33 2cy2_A TTHA1209, probable acet 65.8 20 0.00068 21.8 7.2 50 20-81 103-152 (174)
34 2ae6_A Acetyltransferase, GNAT 65.3 23 0.00078 22.3 7.0 51 19-81 95-145 (166)
35 3d8p_A Acetyltransferase of GN 64.7 21 0.00072 21.7 6.9 49 19-79 92-140 (163)
36 1vbi_A Type 2 malate/lactate d 64.2 47 0.0016 25.6 9.7 73 11-92 77-151 (344)
37 1on0_A YYCN protein; structura 63.8 13 0.00043 23.6 4.7 47 19-77 102-148 (158)
38 2i79_A Acetyltransferase, GNAT 63.0 26 0.00088 22.1 7.2 50 20-81 101-151 (172)
39 2fe7_A Probable N-acetyltransf 62.8 23 0.00079 21.5 5.9 47 19-77 102-148 (166)
40 2vzy_A RV0802C; transferase, G 62.4 30 0.001 22.7 7.0 52 19-82 119-171 (218)
41 3dr6_A YNCA; acetyltransferase 62.2 24 0.00081 21.4 7.2 51 19-81 96-146 (174)
42 1mk4_A Hypothetical protein YQ 61.8 24 0.00082 21.4 6.1 49 18-78 81-129 (157)
43 3fix_A N-acetyltransferase; te 61.2 28 0.00097 22.0 6.3 51 18-80 123-173 (183)
44 2zkr_n 60S ribosomal protein L 60.8 32 0.0011 26.5 7.1 61 21-94 95-182 (297)
45 2z10_A Ribosomal-protein-alani 60.5 30 0.001 22.1 6.4 52 18-81 101-153 (194)
46 3pp9_A Putative streptothricin 59.9 30 0.001 21.9 7.0 52 18-81 113-164 (187)
47 2i6c_A Putative acetyltransfer 59.7 26 0.0009 21.1 7.0 51 19-81 89-140 (160)
48 3igr_A Ribosomal-protein-S5-al 59.6 29 0.00099 21.6 7.5 50 19-80 109-159 (184)
49 2q7b_A Acetyltransferase, GNAT 59.1 32 0.0011 22.0 6.2 47 22-80 114-160 (181)
50 4evy_A Aminoglycoside N(6')-ac 58.9 30 0.001 21.6 6.4 48 19-78 109-156 (166)
51 1s3z_A Aminoglycoside 6'-N-ace 58.2 30 0.001 21.3 7.8 47 21-79 111-157 (165)
52 2g8y_A Malate/L-lactate dehydr 58.0 66 0.0023 25.3 9.3 73 11-92 104-180 (385)
53 2oh1_A Acetyltransferase, GNAT 57.2 32 0.0011 21.3 6.9 50 19-80 117-166 (179)
54 3i9s_A Integron cassette prote 57.2 28 0.00096 22.0 5.5 47 19-77 117-163 (183)
55 2q02_A Putative cytoplasmic pr 57.0 33 0.0011 23.7 6.2 50 29-80 22-71 (272)
56 2fia_A Acetyltransferase; stru 56.9 30 0.001 20.9 6.8 51 20-82 90-140 (162)
57 2eui_A Probable acetyltransfer 56.8 23 0.00079 21.1 4.8 48 18-77 91-138 (153)
58 2b5g_A Diamine acetyltransfera 56.4 32 0.0011 21.1 5.7 46 20-77 103-148 (171)
59 1ais_A TBP, protein (tata-bind 56.4 12 0.00041 26.5 3.8 36 3-41 58-93 (182)
60 2x7b_A N-acetyltransferase SSO 56.4 35 0.0012 21.5 7.1 51 19-81 101-152 (168)
61 1yr0_A AGR_C_1654P, phosphinot 55.7 36 0.0012 21.5 6.9 50 18-79 96-145 (175)
62 2r1i_A GCN5-related N-acetyltr 54.7 32 0.0011 21.1 5.3 45 22-78 114-158 (172)
63 1mp9_A Tata-binding protein; t 54.4 15 0.00052 26.4 4.1 36 3-41 62-97 (198)
64 2z8u_A Tata-box-binding protei 54.4 13 0.00046 26.4 3.8 36 3-41 62-97 (188)
65 3lod_A Putative acyl-COA N-acy 53.8 35 0.0012 20.7 6.0 49 18-78 87-135 (162)
66 1u6m_A Acetyltransferase, GNAT 53.7 31 0.0011 22.5 5.4 52 19-82 126-177 (199)
67 2cnt_A Modification of 30S rib 53.4 38 0.0013 21.0 6.8 49 20-80 78-126 (160)
68 3kws_A Putative sugar isomeras 53.2 12 0.00041 26.5 3.3 44 29-80 41-84 (287)
69 1z4e_A Transcriptional regulat 52.8 36 0.0012 20.8 5.3 50 18-79 98-147 (153)
70 1ytb_A Protein (tata binding p 52.5 14 0.00047 26.2 3.6 36 3-41 54-89 (180)
71 3obe_A Sugar phosphate isomera 52.5 48 0.0016 23.9 6.7 51 28-80 38-96 (305)
72 3owc_A Probable acetyltransfer 52.3 40 0.0014 21.0 7.2 47 22-80 110-157 (188)
73 1f75_A Undecaprenyl pyrophosph 52.1 56 0.0019 24.2 7.0 63 24-87 49-121 (249)
74 3qxb_A Putative xylose isomera 51.9 35 0.0012 24.5 5.8 44 29-80 38-90 (316)
75 1yk3_A Hypothetical protein RV 51.3 43 0.0015 22.6 5.9 49 22-82 143-193 (210)
76 1s7k_A Acetyl transferase; GNA 50.4 42 0.0014 20.7 7.2 52 18-81 108-160 (182)
77 1ufh_A YYCN protein; alpha and 50.1 36 0.0012 21.3 5.1 46 20-77 127-172 (180)
78 1tiq_A Protease synthase and s 49.3 49 0.0017 21.1 7.2 49 21-81 106-154 (180)
79 2jvf_A De novo protein M7; tet 49.2 27 0.00092 22.1 4.1 27 23-49 61-87 (96)
80 1yre_A Hypothetical protein PA 49.0 49 0.0017 21.0 6.8 52 18-81 109-161 (197)
81 3eik_A Tata-box-binding protei 48.7 18 0.00062 26.6 3.8 36 3-41 92-127 (218)
82 1qsm_A HPA2 histone acetyltran 48.7 29 0.00098 20.7 4.2 45 20-76 98-142 (152)
83 1ghe_A Acetyltransferase; acyl 48.1 45 0.0015 20.3 6.7 50 19-81 104-153 (177)
84 3juw_A Probable GNAT-family ac 48.1 46 0.0016 20.5 6.7 52 19-82 111-163 (175)
85 1i60_A IOLI protein; beta barr 47.5 31 0.0011 23.7 4.7 49 29-80 17-66 (278)
86 2fsr_A Acetyltransferase; alph 46.9 57 0.0019 21.2 6.3 49 18-78 124-173 (195)
87 2bue_A AAC(6')-IB; GNAT, trans 46.6 52 0.0018 20.7 6.3 52 19-82 128-180 (202)
88 2zvr_A Uncharacterized protein 46.5 31 0.0011 24.4 4.7 46 28-80 43-88 (290)
89 3fbu_A Acetyltransferase, GNAT 46.3 49 0.0017 20.2 7.8 50 19-80 96-146 (168)
90 1vp8_A Hypothetical protein AF 46.3 37 0.0013 24.8 5.0 47 26-84 30-77 (201)
91 3h4q_A Putative acetyltransfer 46.1 20 0.00068 22.8 3.3 50 22-83 120-169 (188)
92 4ava_A Lysine acetyltransferas 46.0 50 0.0017 23.6 5.8 48 19-78 246-293 (333)
93 2dxq_A AGR_C_4057P, acetyltran 46.0 50 0.0017 20.3 6.5 44 20-75 96-139 (150)
94 4h89_A GCN5-related N-acetyltr 45.8 56 0.0019 20.8 6.0 47 21-78 104-150 (173)
95 2d2r_A Undecaprenyl pyrophosph 45.7 60 0.002 24.0 6.3 62 24-87 44-116 (245)
96 3qas_B Undecaprenyl pyrophosph 45.6 63 0.0022 24.0 6.4 63 24-87 46-118 (253)
97 2vg3_A Undecaprenyl pyrophosph 45.3 47 0.0016 25.2 5.7 59 24-87 84-156 (284)
98 1yvk_A Hypothetical protein BS 45.1 56 0.0019 20.6 7.1 50 19-80 77-126 (163)
99 1nsl_A Probable acetyltransfer 45.0 53 0.0018 20.3 6.5 51 19-81 107-158 (184)
100 2fck_A Ribosomal-protein-serin 43.9 55 0.0019 20.1 7.8 47 22-80 114-161 (181)
101 2zds_A Putative DNA-binding pr 43.9 69 0.0024 22.8 6.3 46 29-80 18-71 (340)
102 3ngf_A AP endonuclease, family 43.7 42 0.0014 23.4 5.0 43 29-80 26-68 (269)
103 3r9f_A MCCE protein; microcin 43.7 58 0.002 20.4 6.9 51 18-80 116-167 (188)
104 1y9k_A IAA acetyltransferase; 42.7 57 0.0019 20.0 6.9 50 20-81 76-125 (157)
105 3aog_A Glutamate dehydrogenase 42.1 31 0.0011 27.6 4.5 61 18-87 212-272 (440)
106 4h8e_A Undecaprenyl pyrophosph 42.1 1.1E+02 0.0036 22.9 7.3 60 23-87 52-125 (256)
107 2qml_A BH2621 protein; structu 41.5 67 0.0023 20.5 6.0 52 19-82 119-171 (198)
108 2ob0_A Human MAK3 homolog; ace 41.4 60 0.0021 19.9 6.9 51 19-81 86-137 (170)
109 2g0w_A LMO2234 protein; putati 40.6 46 0.0016 23.7 4.9 50 29-80 39-88 (296)
110 3aoe_E Glutamate dehydrogenase 40.3 30 0.001 27.5 4.1 59 18-85 195-253 (419)
111 3tcv_A GCN5-related N-acetyltr 40.2 89 0.003 21.5 6.8 51 18-80 139-190 (246)
112 3fyn_A Integron gene cassette 40.0 22 0.00077 22.3 2.8 47 19-77 114-160 (176)
113 3tth_A Spermidine N1-acetyltra 39.9 63 0.0022 19.7 7.1 50 18-79 96-146 (170)
114 3dsb_A Putative acetyltransfer 39.9 53 0.0018 19.5 4.5 46 20-77 99-145 (157)
115 1rm1_A Tata-box binding protei 39.7 30 0.001 25.7 3.8 36 3-41 114-149 (240)
116 3u5e_D 60S ribosomal protein L 39.6 84 0.0029 24.2 6.3 63 20-93 94-181 (297)
117 3ktc_A Xylose isomerase; putat 39.6 75 0.0026 23.0 6.0 46 29-81 36-82 (333)
118 3k92_A NAD-GDH, NAD-specific g 38.4 26 0.00089 28.0 3.5 61 18-87 198-258 (424)
119 2pdo_A Acetyltransferase YPEA; 38.0 67 0.0023 19.5 6.1 47 19-77 83-129 (144)
120 2f9z_C Protein (chemotaxis met 37.4 44 0.0015 23.1 4.2 57 20-78 60-123 (159)
121 3t9y_A Acetyltransferase, GNAT 37.4 28 0.00095 20.8 2.9 49 19-77 94-142 (150)
122 4a17_M RPL5, 60S ribosomal pro 37.1 96 0.0033 23.9 6.3 64 20-94 94-182 (301)
123 2bei_A Diamine acetyltransfera 36.9 79 0.0027 20.0 6.1 46 19-76 102-147 (170)
124 3tlx_A Adenylate kinase 2; str 36.8 32 0.0011 24.1 3.5 47 30-83 17-64 (243)
125 3iz5_Q 60S ribosomal protein L 36.7 83 0.0029 24.3 5.9 63 21-94 96-182 (304)
126 2ft0_A TDP-fucosamine acetyltr 36.4 98 0.0033 20.9 7.1 41 28-79 189-229 (235)
127 3eg7_A Spermidine N1-acetyltra 36.1 74 0.0025 19.4 7.3 49 19-79 98-147 (176)
128 1vkc_A Putative acetyl transfe 35.1 45 0.0015 20.5 3.7 46 19-77 105-150 (158)
129 3l23_A Sugar phosphate isomera 35.1 75 0.0026 22.8 5.3 48 29-80 32-79 (303)
130 3tva_A Xylose isomerase domain 34.5 77 0.0026 22.1 5.2 46 30-80 25-71 (290)
131 1v9l_A Glutamate dehydrogenase 34.3 53 0.0018 26.1 4.7 61 18-88 187-248 (421)
132 3lmz_A Putative sugar isomeras 34.0 83 0.0028 21.6 5.3 44 29-80 33-81 (257)
133 3q71_A Poly [ADP-ribose] polym 33.3 32 0.0011 24.9 3.0 38 4-47 156-196 (221)
134 1k77_A EC1530, hypothetical pr 33.2 50 0.0017 22.5 3.9 42 30-80 19-60 (260)
135 2qul_A D-tagatose 3-epimerase; 33.2 54 0.0018 22.7 4.1 47 29-80 20-67 (290)
136 1eej_A Thiol:disulfide interch 33.1 43 0.0015 23.0 3.6 22 64-86 3-25 (216)
137 3mgd_A Predicted acetyltransfe 33.1 23 0.00079 21.4 2.0 50 19-83 98-147 (157)
138 3h2b_A SAM-dependent methyltra 32.9 38 0.0013 22.2 3.2 27 62-88 162-188 (203)
139 4hty_A Cellulase; (alpha/beta) 32.5 69 0.0024 23.8 4.9 37 30-77 89-138 (359)
140 3sgv_B Undecaprenyl pyrophosph 31.9 1.5E+02 0.0052 22.0 6.6 63 23-87 45-118 (253)
141 3ur8_A Glucan endo-1,3-beta-D- 31.8 86 0.0029 24.0 5.4 36 30-78 19-54 (323)
142 1wwz_A Hypothetical protein PH 31.8 93 0.0032 19.3 6.5 47 21-80 101-147 (159)
143 2tmg_A Protein (glutamate dehy 31.3 49 0.0017 26.2 4.0 59 18-88 186-248 (415)
144 3kkw_A Putative uncharacterize 31.2 1E+02 0.0035 19.5 7.0 52 19-82 111-163 (182)
145 1yx1_A Hypothetical protein PA 31.1 71 0.0024 22.1 4.5 46 29-80 26-71 (264)
146 2zw5_A Bleomycin acetyltransfe 31.0 1.3E+02 0.0044 20.6 7.2 50 18-79 104-154 (301)
147 2r7h_A Putative D-alanine N-ac 30.8 94 0.0032 19.0 6.9 52 19-80 108-159 (177)
148 3a11_A Translation initiation 30.7 74 0.0025 24.3 4.8 51 26-83 152-202 (338)
149 1leh_A Leucine dehydrogenase; 30.7 63 0.0022 24.9 4.5 56 19-84 149-206 (364)
150 3cqj_A L-ribulose-5-phosphate 30.1 59 0.002 22.8 3.9 51 29-80 33-86 (295)
151 1yx0_A Hypothetical protein YS 29.5 67 0.0023 19.9 3.8 46 21-78 86-133 (159)
152 3jvn_A Acetyltransferase; alph 29.3 19 0.00066 22.1 1.1 49 18-78 101-149 (166)
153 2bz1_A GTP cyclohydrolase II; 29.3 70 0.0024 22.8 4.2 45 31-88 133-179 (196)
154 3ugs_B Undecaprenyl pyrophosph 28.9 1.5E+02 0.005 21.7 6.0 61 23-87 34-107 (225)
155 2fiw_A GCN5-related N-acetyltr 28.7 1E+02 0.0035 18.7 5.5 45 21-80 98-142 (172)
156 2z0f_A Putative phosphoglucomu 28.5 47 0.0016 26.4 3.5 74 8-86 27-105 (524)
157 2vi7_A Acetyltransferase PA137 28.0 1.1E+02 0.0039 19.1 7.2 50 19-80 99-149 (177)
158 4abl_A Poly [ADP-ribose] polym 27.9 40 0.0014 23.5 2.7 37 5-47 126-165 (183)
159 2fl4_A Spermine/spermidine ace 27.5 1.1E+02 0.0038 18.8 7.3 50 20-81 85-135 (149)
160 2yfq_A Padgh, NAD-GDH, NAD-spe 27.0 43 0.0015 26.6 3.0 55 18-83 189-245 (421)
161 3n70_A Transport activator; si 26.7 91 0.0031 19.7 4.1 32 34-72 16-47 (145)
162 3na5_A Phosphoglucomutase; iso 26.6 2.1E+02 0.007 23.2 7.0 72 8-85 67-142 (570)
163 1aq0_A 1,3-1,4-beta-glucanase; 26.5 65 0.0022 24.3 3.8 36 30-78 17-52 (306)
164 2xd7_A Core histone macro-H2A. 26.4 63 0.0022 22.5 3.5 38 4-47 137-177 (193)
165 1mp9_A Tata-binding protein; t 25.4 79 0.0027 22.5 3.9 36 3-41 153-188 (198)
166 2aj6_A Hypothetical protein MW 25.2 28 0.00094 21.8 1.3 46 21-78 106-151 (159)
167 2cyg_A Beta-1, 3-glucananse; e 25.2 83 0.0029 23.8 4.2 35 31-78 18-52 (312)
168 3ff4_A Uncharacterized protein 24.9 79 0.0027 20.5 3.6 38 29-77 72-109 (122)
169 3i3g_A N-acetyltransferase; ma 24.8 1.2E+02 0.0041 18.2 5.8 47 19-80 110-156 (161)
170 4i1u_A Dephospho-COA kinase; s 24.7 67 0.0023 22.8 3.4 23 56-78 16-38 (210)
171 3u0h_A Xylose isomerase domain 24.5 18 0.00062 25.1 0.3 49 29-80 19-67 (281)
172 2zqe_A MUTS2 protein; alpha/be 24.5 1.2E+02 0.0042 18.2 7.8 56 20-83 13-68 (83)
173 2hvw_A Deoxycytidylate deamina 24.4 1.1E+02 0.0036 21.5 4.4 38 33-80 138-175 (184)
174 2r4q_A Phosphotransferase syst 24.2 99 0.0034 20.0 3.9 26 24-50 18-43 (106)
175 2bma_A Glutamate dehydrogenase 24.0 69 0.0024 26.0 3.7 59 18-85 229-287 (470)
176 2r48_A Phosphotransferase syst 23.8 98 0.0033 20.0 3.8 27 23-50 17-43 (106)
177 3d3s_A L-2,4-diaminobutyric ac 23.5 56 0.0019 20.8 2.6 43 21-75 110-152 (189)
178 2qho_B E3 ubiquitin-protein li 23.4 44 0.0015 19.4 1.8 19 58-76 21-39 (53)
179 1qtw_A Endonuclease IV; DNA re 23.2 32 0.0011 23.9 1.4 47 29-76 15-63 (285)
180 2z8u_A Tata-box-binding protei 23.2 86 0.0029 22.2 3.7 35 3-40 153-187 (188)
181 2a2l_A Unknown; structural gen 23.1 1.3E+02 0.0045 20.0 4.5 35 19-54 12-46 (145)
182 1wqa_A Phospho-sugar mutase; a 23.1 70 0.0024 24.9 3.5 63 18-86 17-81 (455)
183 3lw7_A Adenylate kinase relate 23.0 66 0.0023 20.0 2.9 25 57-81 9-33 (179)
184 3kh6_A Poly [ADP-ribose] polym 22.8 1.2E+02 0.0041 21.4 4.5 36 6-47 138-176 (199)
185 3uw2_A Phosphoglucomutase/phos 22.8 1.2E+02 0.0042 24.0 4.9 63 18-86 40-102 (485)
186 2nu8_B SCS-beta, succinyl-COA 22.7 1.8E+02 0.0062 22.4 5.8 43 26-78 327-370 (388)
187 3p6l_A Sugar phosphate isomera 22.6 1.9E+02 0.0064 19.7 5.8 52 29-80 25-83 (262)
188 2qw5_A Xylose isomerase-like T 22.6 1.3E+02 0.0045 21.5 4.8 42 30-79 35-87 (335)
189 3shp_A Putative acetyltransfer 22.5 1.6E+02 0.0053 18.8 6.9 45 25-80 103-148 (176)
190 1ghs_A 1,3-beta-glucanase; hyd 22.3 71 0.0024 24.1 3.3 35 31-78 18-52 (306)
191 1ro5_A Autoinducer synthesis p 22.3 1.2E+02 0.0041 20.6 4.3 43 21-77 118-160 (201)
192 3cny_A Inositol catabolism pro 22.3 83 0.0028 21.9 3.5 41 29-79 34-74 (301)
193 1bgv_A Glutamate dehydrogenase 22.1 68 0.0023 25.7 3.3 58 18-85 207-265 (449)
194 1bqc_A Protein (beta-mannanase 22.1 2.1E+02 0.0071 20.3 5.7 49 31-83 37-86 (302)
195 3civ_A Endo-beta-1,4-mannanase 22.1 2.6E+02 0.0087 21.1 7.2 50 29-78 56-115 (343)
196 2fp4_B Succinyl-COA ligase [GD 21.9 1.2E+02 0.0041 23.5 4.6 43 27-79 335-378 (395)
197 3g8q_A Predicted RNA-binding p 21.7 2.6E+02 0.0089 21.2 6.2 46 31-88 70-115 (278)
198 3mw9_A GDH 1, glutamate dehydr 21.6 1.1E+02 0.0037 25.1 4.4 62 18-87 213-281 (501)
199 2ooa_A E3 ubiquitin-protein li 21.5 45 0.0015 19.4 1.6 17 59-75 22-38 (52)
200 2g3q_A Protein YBL047C; endocy 21.1 80 0.0027 16.5 2.5 12 62-73 18-29 (43)
201 3ld2_A SMU.2055, putative acet 21.0 1.6E+02 0.0056 18.4 6.3 49 19-80 123-171 (197)
202 3vup_A Beta-1,4-mannanase; TIM 20.9 2E+02 0.007 19.5 6.5 21 27-47 43-63 (351)
203 3fpw_A HBPS, extracellular HAE 20.9 1.4E+02 0.005 21.2 4.5 35 18-53 64-98 (192)
204 3fnc_A Protein LIN0611, putati 20.9 1.4E+02 0.0049 17.7 5.5 48 20-81 99-146 (163)
205 2m1z_A LMO0427 protein; homolo 20.7 1.3E+02 0.0046 19.3 4.0 26 24-50 18-43 (106)
206 3ouv_A Serine/threonine protei 20.7 1.1E+02 0.0039 17.2 3.4 24 58-81 14-37 (71)
207 3f5b_A Aminoglycoside N(6')ace 20.5 1.6E+02 0.0053 18.0 5.2 50 18-80 107-156 (182)
208 2kyr_A Fructose-like phosphotr 20.2 1.4E+02 0.0048 19.4 4.0 27 23-50 20-46 (111)
209 3em5_A Beta-1,3-glucanase; gly 20.0 66 0.0022 24.6 2.7 35 30-77 18-52 (316)
No 1
>3u5c_O RP59A, 40S ribosomal protein S14-A; translation, ribosome, ribosomal, ribosomal R ribosomal protein, eukaryotic ribosome, RNA-protein C; 3.00A {Saccharomyces cerevisiae} PDB: 3izb_K 3o30_H 3o2z_H 3u5g_O 1s1h_K 3jyv_K*
Probab=100.00 E-value=1.7e-46 Score=265.58 Aligned_cols=101 Identities=81% Similarity=1.282 Sum_probs=99.0
Q ss_pred CceeeeeccceeeccCCCCcHHHHHHHHHHHHHHHHHcCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEEEEE
Q 043606 1 ETLERITGGMKVKADRDESSPYAAMLAAQDVSQRCKERGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIE 80 (101)
Q Consensus 1 ~t~~~SsG~~gfKg~r~k~t~~Aa~~a~~~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~~I~ 80 (101)
|++|+|+|++|||++++|+||||||+||++++++|+++||+.|+|+|+|+|||+++|||+||++|||+|+.+||+|.+|+
T Consensus 37 ~~~~~ssG~~gfKg~r~ksTpyAAq~aa~~~a~~a~e~Gi~~v~V~vra~gg~~~kgpG~Gr~sairaL~~~Gl~I~~I~ 116 (137)
T 3u5c_O 37 ETIARVTGGMKVKADRDESSPYAAMLAAQDVAAKCKEVGITAVHVKIRATGGTRTKTPGPGGQAALRALARSGLRIGRIE 116 (137)
T ss_dssp SCCCCCBTTTTSCCSTTTTCHHHHHHHHHHHHHHHHHHTCCEEECEEECSCTTSCCSCCGGGHHHHHHHHTTTCEECCCE
T ss_pred EEEEEeCCCcEEeCCcccCCHHHHHHHHHHHHHHHHHcCCeEEEEEEeccCCCcccCCCcchHHHHHHHHhCCCEEEEEE
Confidence 57899999999999998999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCCCCCCCCCCCCCCC
Q 043606 81 DVTPIPTDSTRRKGGRRGRRL 101 (101)
Q Consensus 81 D~TpiphNGcR~~K~RR~~~~ 101 (101)
|+||+|||||||||+||.|||
T Consensus 117 DvTpiPhnGcRp~K~RR~~~~ 137 (137)
T 3u5c_O 117 DVTPVPSDSTRKKGGRRGRRL 137 (137)
T ss_dssp ECCCCCSSCSCCTTCTTCCCC
T ss_pred EcCCCCCCCCCCCCCCCCCCC
Confidence 999999999999999999996
No 2
>2xzm_K RPS14E; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_K 3j0o_K 3j0l_K 2zkq_k 3iz6_K 3jyv_K*
Probab=100.00 E-value=4.3e-45 Score=261.97 Aligned_cols=101 Identities=85% Similarity=1.217 Sum_probs=99.0
Q ss_pred CceeeeeccceeeccCCCCcHHHHHHHHHHHHHHHHHcCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEEEEE
Q 043606 1 ETLERITGGMKVKADRDESSPYAAMLAAQDVSQRCKERGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIE 80 (101)
Q Consensus 1 ~t~~~SsG~~gfKg~r~k~t~~Aa~~a~~~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~~I~ 80 (101)
|++|+|||+++|+++++|+||||||+||++++++|+++||+.|+|+|+|+|||+++|||+||++|||+|+.+||+|.+|+
T Consensus 51 ~~~~~ssgg~~~k~~r~ksTpyAAq~aa~~~a~~a~e~Gi~~v~V~vkG~gg~~~kgpG~GresairaL~~~GlkI~~I~ 130 (151)
T 2xzm_K 51 ETLVRVTGGMKVKADREESSPYAAMQAAIDVVNRCKELKINALHIKLRAKGGVETKQPGPGAQSALRALARSGMKIGRIE 130 (151)
T ss_dssp SEEEECCHHHHCSSGGGGSCHHHHHHHHHHHHHHHHHHTCCEEEEEEECCCTTSCCSCCSHHHHHHHHHHHTSCEEEEEE
T ss_pred EEEEEecCcceEeCCCCcCCHHHHHHHHHHHHHHHHHcCCeEEEEEEEcCCCCCccCCCccHHHHHHHHHHCCCEEEEEE
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCCCCCCCCCCCCCCC
Q 043606 81 DVTPIPTDSTRRKGGRRGRRL 101 (101)
Q Consensus 81 D~TpiphNGcR~~K~RR~~~~ 101 (101)
|+||+|||||||||+||+||+
T Consensus 131 DvTpiPhNGcRp~K~RRvr~~ 151 (151)
T 2xzm_K 131 DVTPIPTDSTRREGGRRGRRL 151 (151)
T ss_dssp ECCCCCSSCCCCSSCTTCSCC
T ss_pred EeCCCCCCCCCCCCCCCCCCC
Confidence 999999999999999999986
No 3
>3j20_M 30S ribosomal protein S11P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=100.00 E-value=1.2e-42 Score=246.01 Aligned_cols=100 Identities=61% Similarity=0.989 Sum_probs=94.8
Q ss_pred Cceee-eeccceeeccCCCCcHHHHHHHHHHHHHHHHHcCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEEEE
Q 043606 1 ETLER-ITGGMKVKADRDESSPYAAMLAAQDVSQRCKERGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRI 79 (101)
Q Consensus 1 ~t~~~-SsG~~gfKg~r~k~t~~Aa~~a~~~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~~I 79 (101)
|+++| |+|++||++.+ |+||||||+||++++++|+++||+.|+|+|+|+|||+++-||+||++|||+|+.+||+|.+|
T Consensus 37 ~~i~~~S~G~~gfkg~~-ksTp~AA~~aa~~~~~~a~e~Gi~~v~V~vkG~gg~~~~~pG~GresairaL~~~Gl~I~~I 115 (137)
T 3j20_M 37 ETISRWSGGMVVKADRD-EPSPYAAMLAARRAAEEALEKGIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRV 115 (137)
T ss_dssp SEEEEEEGGGTCSCTTT-SSSHHHHHHHHHHHHHHHHHHTEEEEEEEEECCCSSSCCSCCTHHHHHHHHHHHHTCEEEEE
T ss_pred EEEEEEccceeeecCCc-cCCHHHHHHHHHHHHHHHHHcCCeEEEEEEECCCCCCCcCCCCcHHHHHHHHHhCCCEEEEE
Confidence 35555 66778999988 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCCCCCCCCCCCCCCC
Q 043606 80 EDVTPIPTDSTRRKGGRRGRRL 101 (101)
Q Consensus 80 ~D~TpiphNGcR~~K~RR~~~~ 101 (101)
+|+||+||||||||+.||+|||
T Consensus 116 ~DvTpiPhnGcRp~g~rr~rrv 137 (137)
T 3j20_M 116 EDVTPIPHDGTRPKGGRRGRRV 137 (137)
T ss_dssp EECCCCCSSCCCCSCCSSSSCC
T ss_pred EEcCCCCCCCCCCCCCCCCCCC
Confidence 9999999999999999999997
No 4
>3r8n_K 30S ribosomal protein S11; protein biosynthesis, RNA, tRNA, transfer RNA, 16S ribosomal subunit, RRF; 3.00A {Escherichia coli} PDB: 2ykr_K 3fih_K* 3iy8_K 3j18_K* 2wwl_K 3oar_K 3oaq_K 3ofb_K 3ofa_K 3ofp_K 3ofx_K 3ofy_K 3ofo_K 3r8o_K 4a2i_K 4gd1_K 4gd2_K 3i1m_K 1vs7_K* 3e1a_C ...
Probab=100.00 E-value=6.4e-41 Score=231.60 Aligned_cols=88 Identities=40% Similarity=0.636 Sum_probs=84.8
Q ss_pred ceeeeeccceeeccCCCCcHHHHHHHHHHHHHHHHHcCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEEEEEe
Q 043606 2 TLERITGGMKVKADRDESSPYAAMLAAQDVSQRCKERGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIED 81 (101)
Q Consensus 2 t~~~SsG~~gfKg~r~k~t~~Aa~~a~~~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~~I~D 81 (101)
.+|.|+|++|||+++ |+||||||+|||+++++|+|+||+.|+|+| +|||+||+++|++|+.+|++|.+|+|
T Consensus 30 i~~~S~G~~gfKg~r-k~tp~AA~~aa~~~~~~~~~~Gi~~v~v~v--------kG~G~Gr~~airaL~~~Gl~I~~I~D 100 (117)
T 3r8n_K 30 LGWATAGGSGFRGSR-KSTPFAAQVAAERCADAVKEYGIKNLEVMV--------KGPGPGRESTIRALNAAGFRITNITD 100 (117)
T ss_dssp SEEEETGGGSCCGGG-GSSHHHHHHHHHHHHHHHTTSCCCEEEEEE--------ECSSSSTTHHHHHHHHTTCEEEEEEE
T ss_pred EEEEcCCccccCCCc-cCCHHHHHHHHHHHHHHHHHhCCcEEEEEE--------eCCCccHHHHHHHHHhCCCEEEEEEE
Confidence 467799999999999 999999999999999999999999999999 78999999999999999999999999
Q ss_pred cCCCCCCCCCCCCCCCC
Q 043606 82 VTPIPTDSTRRKGGRRG 98 (101)
Q Consensus 82 ~TpiphNGcR~~K~RR~ 98 (101)
+||+|||||||||+||+
T Consensus 101 vTpiphnGcRp~K~RRv 117 (117)
T 3r8n_K 101 VTPIPHNGCRPPKKRRV 117 (117)
T ss_dssp CCCCCSSCSCCCCCCCC
T ss_pred eCCCCCCCCCCCCCCCC
Confidence 99999999999999985
No 5
>2vqe_K 30S ribosomal protein S11, 30S ribosomal protein S6; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: c.55.4.1 PDB: 1gix_N* 1hnw_K* 1hnx_K* 1hnz_K* 1hr0_K 1ibk_K* 1ibl_K* 1ibm_K 1j5e_K 1jgo_N* 1jgp_N* 1jgq_N* 1ml5_N* 1n32_K* 1n33_K* 1n34_K 1n36_K 1xmo_K* 1xmq_K* 1xnq_K* ...
Probab=100.00 E-value=2.3e-40 Score=232.11 Aligned_cols=88 Identities=32% Similarity=0.508 Sum_probs=85.4
Q ss_pred ceeeeeccceeeccCCCCcHHHHHHHHHHHHHHHHHcCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEEEEEe
Q 043606 2 TLERITGGMKVKADRDESSPYAAMLAAQDVSQRCKERGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIED 81 (101)
Q Consensus 2 t~~~SsG~~gfKg~r~k~t~~Aa~~a~~~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~~I~D 81 (101)
++|.|+|++||||++ |+||||||+||++++++|+|+||+.|+|+| +|||+||+++|++|+.+||+|.+|+|
T Consensus 40 ~~~~SaG~~gfKg~r-k~tp~AA~~aa~~~~~~~~~~Gi~~v~V~v--------kG~G~Gre~airaL~~~Gl~I~~I~D 110 (129)
T 2vqe_K 40 ITWSSGGVIGYKGSR-KGTPYAAQLAALDAAKKAMAYGMQSVDVIV--------RGTGAGREQAIRALQASGLQVKSIVD 110 (129)
T ss_dssp EEECCTTTTTCCSGG-GGSHHHHHHHHHHHHHHHHTTTCCEEEEEE--------ESCCTTHHHHHHHHHTSSSEEEECEE
T ss_pred EEEEeccceeEcCCC-cCCHHHHHHHHHHHHHHHHHhCCeEEEEEE--------ECCCCCHHHHHHHHHHCCCEEEEEEE
Confidence 578899999999999 999999999999999999999999999999 78999999999999999999999999
Q ss_pred cCCCCCCCCCCCCCCCC
Q 043606 82 VTPIPTDSTRRKGGRRG 98 (101)
Q Consensus 82 ~TpiphNGcR~~K~RR~ 98 (101)
+||+|||||||||+||+
T Consensus 111 vTpiPhnGcRp~K~RRv 127 (129)
T 2vqe_K 111 DTPVPHNGCRPKKKFRK 127 (129)
T ss_dssp CCCCCSSCSCCCGGGCS
T ss_pred cCCCCCCCCCCCCCCCC
Confidence 99999999999999986
No 6
>3bbn_K Ribosomal protein S11; small ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea} SCOP: i.1.1.1
Probab=100.00 E-value=1.1e-39 Score=231.44 Aligned_cols=89 Identities=30% Similarity=0.489 Sum_probs=85.6
Q ss_pred CceeeeeccceeeccCCCCcHHHHHHHHHHHHHHHHHcCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEEEEE
Q 043606 1 ETLERITGGMKVKADRDESSPYAAMLAAQDVSQRCKERGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIE 80 (101)
Q Consensus 1 ~t~~~SsG~~gfKg~r~k~t~~Aa~~a~~~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~~I~ 80 (101)
+++|.|+|++||||++ |+||||||+|+++++++|+|+||+.|+|+| +|||+||+++|++|+.+||+|.+|+
T Consensus 52 ~i~~~SaG~~GfKg~r-ksTp~AA~~aa~~~~~~a~e~Gi~~v~V~v--------kG~G~GReaairaL~~~Gl~I~~I~ 122 (140)
T 3bbn_K 52 VVSWASAGTCGFRGTK-RGTPFAAQTAAGNAIRTVVEQGMQRAEVMI--------KGPGLGRDAALRAIRRSGILLSFVR 122 (140)
T ss_dssp EEEEEETTTSSCCTTS-CSSHHHHHHHHTSGGGTSTTTCCCEEEEEE--------ESCSTTSSHHHHHHHTTTCEEEEEE
T ss_pred EEEEEeccceeEcccc-cCCHHHHHHHHHHHHHHHHHhCCeEEEEEE--------ECCCCcHHHHHHHHHHCCCEEEEEE
Confidence 3578899999999999 999999999999999999999999999999 7899999999999999999999999
Q ss_pred ecCCCCCCCCCCCCCCCC
Q 043606 81 DVTPIPTDSTRRKGGRRG 98 (101)
Q Consensus 81 D~TpiphNGcR~~K~RR~ 98 (101)
|+||+|||||||||+||+
T Consensus 123 DvTpiPhnGcRppK~RRv 140 (140)
T 3bbn_K 123 DVTPMPHNGCRPPKKRRV 140 (140)
T ss_dssp ECCCCCCSCCCCCCCCCC
T ss_pred EcCCCCCCCCCCCCCCCC
Confidence 999999999999999985
No 7
>4e0a_A BH1408 protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG, transferase; 1.80A {Bacillus halodurans} PDB: 4f6a_A*
Probab=85.96 E-value=4.2 Score=24.96 Aligned_cols=57 Identities=11% Similarity=0.097 Sum_probs=41.7
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEEEEEecCCCCC
Q 043606 19 SSPYAAMLAAQDVSQRCKERGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPIPT 87 (101)
Q Consensus 19 ~t~~Aa~~a~~~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~~I~D~Tpiph 87 (101)
+.=++.++. +.+.+.+.+.|+..|.+.+ -.....+++..++.|++.......++-|-
T Consensus 102 g~Gig~~ll-~~~~~~~~~~g~~~i~l~~-----------~~~n~~a~~~y~k~GF~~~~~~~~~~~~~ 158 (164)
T 4e0a_A 102 GGGIGRLIF-EAIISYGKAHQVDAIELDV-----------YDFNDRAKAFYHSLGMRCQKQTMELPLLE 158 (164)
T ss_dssp SSSHHHHHH-HHHHHHHHHTTCSEEEEEE-----------ETTCHHHHHHHHHTTCEEEEEEEEEECC-
T ss_pred cCChHHHHH-HHHHHHHHHcCCCEEEEEE-----------EcCCHHHHHHHHHcCCEEeceeccCCccc
Confidence 334555544 5688889999999999998 23456788999999999887776665543
No 8
>3v2d_S 50S ribosomal protein L18; ribosome associated inhibitor A, RAIA, protein Y, stress RES stationary phase, ribosome hibernation, ribosome; 2.70A {Thermus thermophilus} PDB: 1vsp_M 2hgj_R 2hgq_R 2hgu_R 1vsa_M 2j03_S 2jl6_S 2jl8_S 2v47_S 2v49_S 2wdi_S 2wdj_S 2wdl_S 2wdn_S 2wh2_S 2wh4_S 2wrj_S 2wrl_S 2wro_S 2wrr_S ...
Probab=84.55 E-value=1.3 Score=29.58 Aligned_cols=49 Identities=14% Similarity=0.240 Sum_probs=35.6
Q ss_pred cHHHHHHHHHHHHHHHHHcCCcEEEEEEeecCCCcccCCCCCh-HHHHHHHHhCCCe
Q 043606 20 SPYAAMLAAQDVSQRCKERGITALHIKLRATGGNKTKTPGPGA-QSALRALARSGMK 75 (101)
Q Consensus 20 t~~Aa~~a~~~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~gr-~~~lr~l~~~gl~ 75 (101)
.--||..+++.++++|++.||+.|..-. +|.... || .++..++...||+
T Consensus 62 n~~AA~~vG~llA~ra~~~GI~~vvfDr---gg~~yh----GrV~Ala~~are~GL~ 111 (112)
T 3v2d_S 62 KTEVARQVGRALAEKALALGIKQVAFDR---GPYKYH----GRVKALAEGAREGGLE 111 (112)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCCBCEEEC---TTSCSC----SSTTHHHHHHHHTTCB
T ss_pred CHHHHHHHHHHHHHHHHHCCCCEEEEec---CCCccc----HHHHHHHHHHHHcCCC
Confidence 4458888999999999999999986553 343332 33 3566777888886
No 9
>3r8s_O 50S ribosomal protein L18; protein biosynthesis, RNA, tRNA, transfer RNA, 23S ribosomal subunit, ribosome recycling factor, RRF, ribosome; 3.00A {Escherichia coli} PDB: 3fik_O 3j19_O 2wwq_O 3oat_O* 3oas_O* 3ofd_O 3ofc_O 3ofr_O* 3ofz_O* 3og0_O 3ofq_O 3r8t_O 3i1n_O 1p85_M 1p86_M 1vs8_O 1vs6_O 2aw4_O 2awb_O 1vt2_O ...
Probab=82.15 E-value=1.5 Score=29.34 Aligned_cols=50 Identities=22% Similarity=0.325 Sum_probs=35.2
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCcEEEEEEeecCCCcccCCCCChHH-HHHHHHhCCCe
Q 043606 19 SSPYAAMLAAQDVSQRCKERGITALHIKLRATGGNKTKTPGPGAQS-ALRALARSGMK 75 (101)
Q Consensus 19 ~t~~Aa~~a~~~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~gr~~-~lr~l~~~gl~ 75 (101)
..--||..+++.++++|++.||+.|..-. +|.... ||-. +..++...||+
T Consensus 65 ~n~~AA~~vG~llA~Ral~~GI~~vvfDr---gg~~yh----GrV~Ala~~are~Gl~ 115 (116)
T 3r8s_O 65 GNKDAAAAVGKAVAERALEKGIKDVSFDR---SGFQYH----GRVQALADAAREAGLQ 115 (116)
T ss_dssp SSHHHHHHHHHHHHHHHHTTTCCCCEEEC---TTSCSS----SHHHHHHHHHHHTTCC
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCEEEEec---CCCccc----HHHHHHHHHHHHhCCC
Confidence 34558888999999999999999988654 333332 4533 45666777875
No 10
>1vq8_N 50S ribosomal protein L18P; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: c.55.4.1 PDB: 1vq4_N* 1vq5_N* 1vq6_N* 1vq7_N* 1s72_N* 1vq9_N* 1vqk_N* 1vql_N* 1vqm_N* 1vqn_N* 1vqo_N* 1vqp_N* 1yhq_N* 1yi2_N* 1yij_N* 1yit_N* 1yj9_N* 1yjn_N* 1yjw_N* 2otj_N* ...
Probab=79.99 E-value=2.8 Score=30.40 Aligned_cols=61 Identities=20% Similarity=0.304 Sum_probs=42.2
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCcEEEEEEeecCCCcccCCCCCh-HHHHHHHHhCCCeEEEEEecCCCCCCCCCCC
Q 043606 19 SSPYAAMLAAQDVSQRCKERGITALHIKLRATGGNKTKTPGPGA-QSALRALARSGMKIGRIEDVTPIPTDSTRRK 93 (101)
Q Consensus 19 ~t~~Aa~~a~~~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~gr-~~~lr~l~~~gl~I~~I~D~TpiphNGcR~~ 93 (101)
..--||..+++.++++|++.||+.|.+-. ||...+ .| || .++++++...||+| ||+--|.|
T Consensus 77 ~N~~AA~~vG~llA~Ral~kGI~~vvfDr---gg~~yh-~G-gRV~Ala~gAre~GL~f---------ph~~~~fp 138 (187)
T 1vq8_N 77 GNMPSAYLTGLLAGLRAQEAGVEEAVLDI---GLNSPT-PG-SKVFAIQEGAIDAGLDI---------PHNDDVLA 138 (187)
T ss_dssp SSHHHHHHHHHHHHHHHHHTTCCBCEEEC---TTSCCC-TT-CHHHHHHHHHHHTTCBC---------CCCGGGSC
T ss_pred CcHHHHHHHHHHHHHHHHHCCCCEEEEcC---CCceec-cc-hHHHHHHHHhhcCCEec---------cCCCccCC
Confidence 34557888999999999999999975443 333322 11 34 56778889999974 66655544
No 11
>2zjr_L 50S ribosomal protein L18; ribosome, large ribosomal subunit, ribonucleoprotein, RNA-binding, rRNA-binding, tRNA-binding, methylation; 2.91A {Deinococcus radiodurans} SCOP: c.55.4.1 PDB: 1sm1_M* 2zjp_L* 2zjq_L 1nkw_M 3cf5_L* 3dll_L* 3pio_L* 3pip_L* 1nwy_M* 1nwx_M* 1xbp_M* 1pnu_M 1pny_M 1vor_P 1vou_P 1vow_P 1voy_P 1vp0_P
Probab=79.21 E-value=1.2 Score=29.80 Aligned_cols=49 Identities=18% Similarity=0.289 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHHHHHHHcCCcEEEEEEeecCCCcccCCCCCh-HHHHHHHHhCCCeE
Q 043606 21 PYAAMLAAQDVSQRCKERGITALHIKLRATGGNKTKTPGPGA-QSALRALARSGMKI 76 (101)
Q Consensus 21 ~~Aa~~a~~~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~gr-~~~lr~l~~~gl~I 76 (101)
--||..+++.++++|++.||+.|..-. +|... -|| .+++.++...||++
T Consensus 65 ~~AA~~vG~llA~Ral~~GI~~vvfDr---gg~~y----hgrV~Ala~~are~GL~f 114 (114)
T 2zjr_L 65 TDTAAAVGKALAAAAAEKGIKQVVFDR---GSYKY----HGRVKALADAAREGGLDF 114 (114)
T ss_dssp SSSHHHHHHHHHHHHHTTCCCCCEECC---CSSCS----CSHHHHHHHHHHHHC---
T ss_pred HHHHHHHHHHHHHHHHHCCCCEEEEec---CCccc----cHHHHHHHHHHHHhCCcC
Confidence 347888999999999999999977543 33333 234 34556777778763
No 12
>1ovy_A 50S ribosomal protein L18; ribosome; NMR {Geobacillus stearothermophilus} SCOP: c.55.4.1
Probab=73.75 E-value=2.8 Score=28.24 Aligned_cols=51 Identities=22% Similarity=0.268 Sum_probs=34.7
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCe
Q 043606 19 SSPYAAMLAAQDVSQRCKERGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMK 75 (101)
Q Consensus 19 ~t~~Aa~~a~~~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~ 75 (101)
..--||..+++.++++|++.||+.|.. ..+|.... ---.+++.++...||+
T Consensus 69 ~n~~AA~~vG~llA~Ral~~GI~~vvf---Drgg~~yh---grV~ala~~are~GL~ 119 (120)
T 1ovy_A 69 NNIEAAKKVGELVAKRALEKGIKQVVF---DRGGYLYH---GRVKALADAAREAGLE 119 (120)
T ss_dssp TSHHHHHHHHHHHHHHHHHHSSSCCCC---CSTTCSSC---SSTHHHHHHHHHHHCC
T ss_pred CcHHHHHHHHHHHHHHHHHCCCCEEEE---ecCCcccc---HHHHHHHHHHHHhCCc
Confidence 455688889999999999999998654 33444432 1234566777777765
No 13
>1rfm_A L-sulfolactate dehydrogenase; methanogens, coenzyme M, hyperthermostable, Pro-S hydrogen transfer; HET: NAD; 2.50A {Methanocaldococcus jannaschii} PDB: 2x06_A*
Probab=73.05 E-value=23 Score=27.45 Aligned_cols=73 Identities=14% Similarity=0.123 Sum_probs=56.8
Q ss_pred eeeccCCCCcHHHHHHHHHHHHHHHHHcCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEEEEEecCCC--CCC
Q 043606 11 KVKADRDESSPYAAMLAAQDVSQRCKERGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPI--PTD 88 (101)
Q Consensus 11 gfKg~r~k~t~~Aa~~a~~~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~~I~D~Tpi--phN 88 (101)
-+.+.. --.++++..+.+.++++|++.||-.|.|+= ++.+|..-..+.++.. .|+-=+..++..|. ||+
T Consensus 78 ~vDg~~-g~G~~~~~~am~~aiekAk~~Gig~v~vrn-------s~H~G~~g~y~~~aa~-~Gligi~~tNs~p~vaP~G 148 (344)
T 1rfm_A 78 VIDGDL-GLGQVVGKKAMELAIKKAKNVGVGVVATRN-------ANHFGIAGYYSELAMN-QDMIGITITNTEPAMAPFG 148 (344)
T ss_dssp EEEEEE-ECHHHHHHHHHHHHHHHHHHHSEEEEEEEE-------ECCCSCTHHHHHHHHT-TTSEEEEEECCSSCBCCTT
T ss_pred EEECCC-CchHHHHHHHHHHHHHHHHHhCEEEEEEec-------CCCcchhHHHHHHHHH-CCCeEEEEeCCCCeeCCCC
Confidence 355555 667889999999999999999999988875 3889998888877554 67777777776665 888
Q ss_pred CCCC
Q 043606 89 STRR 92 (101)
Q Consensus 89 GcR~ 92 (101)
|-+|
T Consensus 149 g~~~ 152 (344)
T 1rfm_A 149 GKEK 152 (344)
T ss_dssp BCSC
T ss_pred CCCC
Confidence 7543
No 14
>3eo4_A Uncharacterized protein MJ1062; APC60792.2,MJ_1062,methanocaldococcus jannaschii DSM 2661, S genomics, PSI-2; HET: MES PG6; 2.19A {Methanocaldococcus jannaschii}
Probab=72.65 E-value=15 Score=22.91 Aligned_cols=51 Identities=12% Similarity=0.067 Sum_probs=38.0
Q ss_pred CCcHHHHHHHHHHHHHHHHHcCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEEEEE
Q 043606 18 ESSPYAAMLAAQDVSQRCKERGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIE 80 (101)
Q Consensus 18 k~t~~Aa~~a~~~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~~I~ 80 (101)
++.-++..+ .+.+.+.+.++|+..|.+.+ -..-..+++.+.+.|+......
T Consensus 103 rg~Gig~~l-l~~~~~~a~~~g~~~i~l~v-----------~~~N~~a~~~y~k~GF~~~g~~ 153 (164)
T 3eo4_A 103 WGKHIGRHS-VSLVLKWLKNIGYKKAHARI-----------LENNIRSIKLFESLGFKKTKKG 153 (164)
T ss_dssp TTSSHHHHH-HHHHHHHHHHTTCCEEEEEE-----------ETTCHHHHHHHHHTTCEEEEEC
T ss_pred cCccHHHHH-HHHHHHHHHhCCCcEEEEEe-----------CCCCHHHHHHHHHCCCEEEeee
Confidence 344455554 45678888999999999998 3445678999999999887643
No 15
>1xrh_A Ureidoglycolate dehydrogenase; structural genomics, protein structure initiative, NYSGXRC, ALLD, GLXB8, B0517, PSI; 2.25A {Escherichia coli} SCOP: c.122.1.1
Probab=72.07 E-value=29 Score=26.90 Aligned_cols=72 Identities=15% Similarity=0.207 Sum_probs=55.9
Q ss_pred eeccCCCCcHHHHHHHHHHHHHHHHHcCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEEEEEecCCC--CCCC
Q 043606 12 VKADRDESSPYAAMLAAQDVSQRCKERGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPI--PTDS 89 (101)
Q Consensus 12 fKg~r~k~t~~Aa~~a~~~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~~I~D~Tpi--phNG 89 (101)
+.+.. --.++++..+.+.++++|++.|+-.|.|+= ++.+|..-..+.++.. .|+-=+..++..|. ||+|
T Consensus 81 vDg~~-g~G~~~~~~am~~aiekAk~~Gi~~v~vrn-------s~H~G~~g~y~~~aa~-~Gligi~~tNs~~~vaP~Gg 151 (351)
T 1xrh_A 81 LHADN-AAGQVAAKMGMEHAIKTAQQNGVAVVGISR-------MGHSGAISYFVQQAAR-AGFIGISMCQSDPMVVPFGG 151 (351)
T ss_dssp EEEEE-ECHHHHHHHHHHHHHHHHHHHSEEEEEEEE-------ECCCCCTHHHHHHHHH-TTSEEEEEECCCCCBCCTTB
T ss_pred EECCC-CcHHHHHHHHHHHHHHHHHHcCEEEEEEeC-------CCCcchHHHHHHHHHH-CCCeEEEEeCCCCeeCCCCC
Confidence 55555 567889999999999999999999888875 3889998888877555 67766666776565 8888
Q ss_pred CCC
Q 043606 90 TRR 92 (101)
Q Consensus 90 cR~ 92 (101)
-+|
T Consensus 152 ~~~ 154 (351)
T 1xrh_A 152 AEI 154 (351)
T ss_dssp SSC
T ss_pred CCC
Confidence 543
No 16
>3j21_O 50S ribosomal protein L18P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=71.51 E-value=1 Score=33.07 Aligned_cols=57 Identities=16% Similarity=0.271 Sum_probs=41.5
Q ss_pred cHHHHHHHHHHHHHHHHHcCCcEEEEEEeecCCCcccCCCC---Ch-HHHHHHHHhCCCeEEEEEecCCCCCCCCCCC
Q 043606 20 SPYAAMLAAQDVSQRCKERGITALHIKLRATGGNKTKTPGP---GA-QSALRALARSGMKIGRIEDVTPIPTDSTRRK 93 (101)
Q Consensus 20 t~~Aa~~a~~~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~---gr-~~~lr~l~~~gl~I~~I~D~TpiphNGcR~~ 93 (101)
.--||..+++.++++|++.||+.|.+-. .|.=. || .+++++....||+| ||+--|.|
T Consensus 79 N~~AA~~vG~llA~Ral~kGI~~vvfDr--------gg~~y~~hgRV~Ala~gAre~GL~i---------Phs~~~fp 139 (203)
T 3j21_O 79 NTPSAYLLGLLIGYKAKQAGIEEAILDI--------GLHPPVRGSSVFAVLKGAVDAGLNV---------PHSPEIFP 139 (203)
T ss_dssp SHHHHHHHHHHSSSSTTSSCCCCCEEEC--------CSSCCCTTSHHHHHHHHHHHHTCCC---------CCCSSCSC
T ss_pred cHHHHHHHHHHHHHHHHhCCCCEEEEec--------CcceeccCcchhhhhhhcccCCeec---------ccCCccCC
Confidence 4457888889999999999999886654 33332 44 45677888889964 88766655
No 17
>3f8k_A Protein acetyltransferase; GCN5-related N-acetyltransferase; HET: COA; 1.84A {Sulfolobus solfataricus P2}
Probab=71.28 E-value=14 Score=22.66 Aligned_cols=48 Identities=10% Similarity=0.205 Sum_probs=36.0
Q ss_pred cHHHHHHHHHHHHHHHHHcCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEEEE
Q 043606 20 SPYAAMLAAQDVSQRCKERGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRI 79 (101)
Q Consensus 20 t~~Aa~~a~~~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~~I 79 (101)
.=++.+ +.+.+.+.+.+.|+..+.+.+ ......+++...+.|++....
T Consensus 88 ~Gig~~-ll~~~~~~~~~~g~~~i~l~~-----------~~~N~~a~~~y~k~GF~~~~~ 135 (160)
T 3f8k_A 88 LGIGTL-LVKTLIEEAKKSGLSTVKFYT-----------LPENTPMIKIGRKLGFKMRFY 135 (160)
T ss_dssp SSHHHH-HHHHHHHHHHHTTCSEEEEEE-----------CTTCHHHHHHHHHHTCEEEEC
T ss_pred CCHHHH-HHHHHHHHHHHcCceEEEEEE-----------cccCHHHHHHHHHcCCEEEee
Confidence 334444 445678888999999999988 444567889899999988743
No 18
>3uoe_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.31A {Sinorhizobium meliloti}
Probab=70.73 E-value=31 Score=26.89 Aligned_cols=73 Identities=22% Similarity=0.178 Sum_probs=56.6
Q ss_pred eeeccCCCCcHHHHHHHHHHHHHHHHHcCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEEEEEecCCC--CCC
Q 043606 11 KVKADRDESSPYAAMLAAQDVSQRCKERGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPI--PTD 88 (101)
Q Consensus 11 gfKg~r~k~t~~Aa~~a~~~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~~I~D~Tpi--phN 88 (101)
-+.+.. --.++++..+.+.++++|++.||-.|.|+= ++.+|..-..+.++.. .|+-=+..++..|. ||+
T Consensus 101 ~vDg~~-g~G~~~~~~Am~~aiekAk~~Gig~v~vrn-------S~H~G~~g~y~~~aa~-~Gligi~~tns~p~vaP~G 171 (357)
T 3uoe_A 101 SVDGER-GLGPVVMMDAMRVTRRILKETGLAIAAIRN-------ANHMGMLAYYAEAAAR-DGLIGIVMSTSEALVHPFG 171 (357)
T ss_dssp EEEEEE-ECHHHHHHHHHHHHHHHHHHHSEEEEEEEE-------ECCCCCTHHHHHHHHH-TTCEEEEEECCSSCBCCTT
T ss_pred EEECCC-CchHHHHHHHHHHHHHHHHHhCEEEEEEec-------CCCccchHHHHHHHHH-CCCEEEEEcCCCCeeCCCC
Confidence 355555 667889999999999999999999988875 3889998888877655 67766666766655 888
Q ss_pred CCCC
Q 043606 89 STRR 92 (101)
Q Consensus 89 GcR~ 92 (101)
|-+|
T Consensus 172 G~~~ 175 (357)
T 3uoe_A 172 GTQA 175 (357)
T ss_dssp BCSC
T ss_pred CCCC
Confidence 7543
No 19
>1v9n_A Malate dehydrogenase; riken structural genomics/proteomics initiati structural genomics, oxidoreductase; HET: NDP; 2.10A {Pyrococcus horikoshii}
Probab=69.67 E-value=37 Score=26.37 Aligned_cols=73 Identities=19% Similarity=0.231 Sum_probs=57.8
Q ss_pred eeeccCCCCcHHHHHHHHHHHHHHHHHcCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEEEEEecCCC--CCC
Q 043606 11 KVKADRDESSPYAAMLAAQDVSQRCKERGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPI--PTD 88 (101)
Q Consensus 11 gfKg~r~k~t~~Aa~~a~~~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~~I~D~Tpi--phN 88 (101)
-+.+.. ---++++..+.+.++++|++.|+-.|.|+= ++.+|..-..+.++.. .|+-=+..++..|. ||+
T Consensus 89 ~vDg~~-g~G~~~~~~am~~aiekAk~~Gi~~v~vrn-------s~H~G~~g~y~~~aa~-~Gligi~~tNs~p~vaP~G 159 (360)
T 1v9n_A 89 LIDGDE-GLGQVVGYRSMKLAIKKAKDTGIGIVIARN-------SNHYGIAGYYALMAAE-EGMIGISMTNSRPLVAPTG 159 (360)
T ss_dssp EEECTT-BCHHHHHHHHHHHHHHHHHHHSEEEEEEEE-------ECCCSCTHHHHHHHHT-TTSEEEEEECCSSCBCCTT
T ss_pred EEECCC-CcHHHHHHHHHHHHHHHHHHcCEEEEEEeC-------CCCcchHHHHHHHHHH-CCCeEEEEeCCCCeeCCCC
Confidence 466666 778899999999999999999999888875 3889998888877555 68776677776665 888
Q ss_pred CCCC
Q 043606 89 STRR 92 (101)
Q Consensus 89 GcR~ 92 (101)
|-+|
T Consensus 160 g~~~ 163 (360)
T 1v9n_A 160 GIER 163 (360)
T ss_dssp CCSC
T ss_pred CCCC
Confidence 8543
No 20
>3pzj_A Probable acetyltransferases; MCSG, PSI-2, structural genomics, protein structure initiati midwest center for structural genomics; HET: MSE; 1.85A {Chromobacterium violaceum}
Probab=69.28 E-value=21 Score=23.57 Aligned_cols=51 Identities=12% Similarity=0.032 Sum_probs=38.7
Q ss_pred CCcHHHHHHHHHHHHHHHHHcCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEEEEE
Q 043606 18 ESSPYAAMLAAQDVSQRCKERGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIE 80 (101)
Q Consensus 18 k~t~~Aa~~a~~~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~~I~ 80 (101)
++.-|+..+. +.+.+.+.++|+..|.+.+ -..-..+++.+.+.|++..-+.
T Consensus 132 ~g~Gig~~ll-~~l~~~a~~~g~~~i~l~v-----------~~~N~~a~~~y~k~GF~~~g~~ 182 (209)
T 3pzj_A 132 RRTRLATEAV-FLLLKTAFELGYRRCEWRC-----------DSRNAASAAAARRFGFQFEGTL 182 (209)
T ss_dssp TTSHHHHHHH-HHHHHHHHHTTCSEEEEEE-----------ETTCHHHHHHHHHHTCEEEEEE
T ss_pred hcCCHHHHHH-HHHHHHHHHcCCcEEEEee-----------cCCCHHHHHHHHHCCCEEeeee
Confidence 5556665544 5688888899999999999 3445679999999999876543
No 21
>2ge3_A Probable acetyltransferase; structural GEN PSI, protein structure initiative, midwest center for struc genomics, MCSG; HET: ACO; 2.25A {Agrobacterium tumefaciens} SCOP: d.108.1.1
Probab=68.97 E-value=19 Score=22.62 Aligned_cols=51 Identities=12% Similarity=0.140 Sum_probs=37.4
Q ss_pred cHHHHHHHHHHHHHHHHHcCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEEEEEec
Q 043606 20 SPYAAMLAAQDVSQRCKERGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDV 82 (101)
Q Consensus 20 t~~Aa~~a~~~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~~I~D~ 82 (101)
.=++..+. +.+.+.+.++|+..|.+.+ ......+++...+.|++.....+.
T Consensus 100 ~Gig~~ll-~~~~~~a~~~g~~~i~l~v-----------~~~N~~a~~~y~k~GF~~~~~~~~ 150 (170)
T 2ge3_A 100 KGLGARLM-RRTLDAAHEFGLHRIELSV-----------HADNARAIALYEKIGFAHEGRARD 150 (170)
T ss_dssp SSHHHHHH-HHHHHHHHHHTCCEEEEEE-----------ETTCHHHHHHHHHHTCEEEEEEEE
T ss_pred CCHHHHHH-HHHHHHHHHCCceEEEEEE-----------EcCCHHHHHHHHHCCCEEEeEecc
Confidence 33555544 5678888889999999998 233467889899999987755443
No 22
>3i0p_A Malate dehydrogenase; araerobic parasitic protozoan, amoebic dysentery, ssgcid, NI infectious disease, structural genomics; HET: NAD; 2.60A {Entamoeba histolytica}
Probab=68.91 E-value=34 Score=26.62 Aligned_cols=73 Identities=10% Similarity=0.022 Sum_probs=57.9
Q ss_pred eeeccCCCCcHHHHHHHHHHHHHHHHHcCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEEEEEecCCC--CCC
Q 043606 11 KVKADRDESSPYAAMLAAQDVSQRCKERGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPI--PTD 88 (101)
Q Consensus 11 gfKg~r~k~t~~Aa~~a~~~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~~I~D~Tpi--phN 88 (101)
-+.+.. --.++++..+.+.++++|++.||-.|.|+= ++.+|..-..+.++.. .|+-=+..++..|. ||+
T Consensus 85 ~vDg~~-g~G~~~~~~am~~aiekAk~~Gig~v~vrn-------s~H~G~~g~y~~~aa~-~Gligi~~tNs~p~vaP~G 155 (365)
T 3i0p_A 85 VLDGNN-GFGHVNGTIGMKMAIEKAKKYGMGMVVVRN-------STHFGIAGYYSLLAAQ-EGCIGICGTNARSSVAATF 155 (365)
T ss_dssp EEECTT-CCHHHHHHHHHHHHHHHHHHHSEEEEEEEE-------ECCCSCHHHHHHHHHH-TTEEEEEEECCSSCBCCTT
T ss_pred EEECCC-CchHHHHHHHHHHHHHHHHHhCEEEEEEec-------CCCcchhHHHHHHHHH-CCCEEEEEeCCCCeeCCCC
Confidence 466666 778899999999999999999999988875 3889987777877554 67777777777776 888
Q ss_pred CCCC
Q 043606 89 STRR 92 (101)
Q Consensus 89 GcR~ 92 (101)
|-+|
T Consensus 156 G~~~ 159 (365)
T 3i0p_A 156 GDEP 159 (365)
T ss_dssp CCSC
T ss_pred CCCC
Confidence 8543
No 23
>4h8a_A Ureidoglycolate dehydrogenase; rossmann fold, oxidoreductase; HET: NAI; 1.64A {Escherichia coli} PDB: 4fju_A* 4fjs_A* 1xrh_A
Probab=68.89 E-value=38 Score=26.13 Aligned_cols=73 Identities=15% Similarity=0.195 Sum_probs=57.6
Q ss_pred eeeccCCCCcHHHHHHHHHHHHHHHHHcCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEEEEEecCCC--CCC
Q 043606 11 KVKADRDESSPYAAMLAAQDVSQRCKERGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPI--PTD 88 (101)
Q Consensus 11 gfKg~r~k~t~~Aa~~a~~~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~~I~D~Tpi--phN 88 (101)
-+.+.. --.++++..+.+.++++|++.|+-.|.|+= ++.+|..-..+.++.. .|+-=+..++..|. ||+
T Consensus 80 ~vDg~~-g~G~~~~~~am~~aiekAk~~Gig~v~vrn-------s~H~G~~g~y~~~aa~-~Gligi~~tNs~p~vaP~G 150 (339)
T 4h8a_A 80 ILHADN-AAGQVAAKMGMEHAIKTAQQNGVAVVGISR-------MGHSGAISYFVQQAAR-AGFIGISMCQSDPMVVPFG 150 (339)
T ss_dssp EEECTT-CCHHHHHHHHHHHHHHHHHHHSEEEEEEEE-------ECCCCCTHHHHHHHHH-TTSEEEEEECCCSCBCCTT
T ss_pred EEECCC-CchHHHHHHHHHHHHHHHHHhCEEEEEEec-------CCCcchhHHHHHHHHH-CCCEEEEEeCCCCeeCCCC
Confidence 466666 778899999999999999999999998875 3889998888877555 67776677766665 888
Q ss_pred CCCC
Q 043606 89 STRR 92 (101)
Q Consensus 89 GcR~ 92 (101)
|-+|
T Consensus 151 g~~~ 154 (339)
T 4h8a_A 151 GAEI 154 (339)
T ss_dssp BSSC
T ss_pred CCCC
Confidence 8543
No 24
>1nxu_A Hypothetical oxidoreductase YIAK; hypothetical protein, structural genomics, PSI, protein structure initiative; 1.80A {Escherichia coli} SCOP: c.122.1.1 PDB: 1s20_A*
Probab=68.36 E-value=38 Score=25.99 Aligned_cols=73 Identities=12% Similarity=0.073 Sum_probs=57.4
Q ss_pred eeeccCCCCcHHHHHHHHHHHHHHHHHcCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEEEEEecCCC--CCC
Q 043606 11 KVKADRDESSPYAAMLAAQDVSQRCKERGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPI--PTD 88 (101)
Q Consensus 11 gfKg~r~k~t~~Aa~~a~~~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~~I~D~Tpi--phN 88 (101)
-+.+.. --.++++..+.+.++++|++.|+-.|.|+= ++.+|..-..+.++.. .|+-=+..++..|. ||+
T Consensus 78 ~vDg~~-g~G~~~~~~am~~aiekAk~~Gi~~v~vrn-------s~H~G~~g~y~~~aa~-~Gligi~~tns~~~vaP~G 148 (333)
T 1nxu_A 78 QWDAQR-SIGNLTAKKMMDRAIELAADHGIGLVALRN-------ANHWMRGGSYGWQAAE-KGYIGICWTNSIAVMPPWG 148 (333)
T ss_dssp EEECTT-CCHHHHHHHHHHHHHHHHHHHSEEEEEEEE-------ECCCSCTHHHHHHHHH-TTCEEEEEECCSSCBCCTT
T ss_pred EEECCC-CcHHHHHHHHHHHHHHHHHHcCEEEEEEeC-------CCCCCccHHHHHHHHH-CCCEEEEEeCCCCeeCCCC
Confidence 466666 778999999999999999999999888875 3789998888877555 68766667776565 888
Q ss_pred CCCC
Q 043606 89 STRR 92 (101)
Q Consensus 89 GcR~ 92 (101)
|-+|
T Consensus 149 g~~~ 152 (333)
T 1nxu_A 149 AKEC 152 (333)
T ss_dssp BSSC
T ss_pred CCCC
Confidence 8543
No 25
>1vhs_A Similar to phosphinothricin acetyltransferase; structural genomics, unknown function; 1.80A {Bacillus subtilis} SCOP: d.108.1.1
Probab=68.36 E-value=19 Score=23.13 Aligned_cols=50 Identities=14% Similarity=0.132 Sum_probs=36.8
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEEEEE
Q 043606 19 SSPYAAMLAAQDVSQRCKERGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIE 80 (101)
Q Consensus 19 ~t~~Aa~~a~~~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~~I~ 80 (101)
+.=++..+. +.+.+.+.++|+..|.+.+ ......|++...+.|+......
T Consensus 95 g~GiG~~ll-~~~~~~a~~~g~~~i~l~v-----------~~~N~~A~~~yek~GF~~~g~~ 144 (175)
T 1vhs_A 95 GKGVGSYLL-QEALRIAPNLGIRSLMAFI-----------FGHNKPSLKLFEKHGFAEWGLF 144 (175)
T ss_dssp SSSHHHHHH-HHHHHHGGGGTCSEEEEEE-----------ETTCHHHHHHHHHTTCEEEEEE
T ss_pred CCCHHHHHH-HHHHHHHHhCCceEEEEEE-----------ecCCHHHHHHHHHCCCEEEeEc
Confidence 334555444 5678888889999999988 3345678999999999877543
No 26
>2jlm_A Putative phosphinothricin N-acetyltransferase; methionine sulfoximine; 2.35A {Acinetobacter baylyi}
Probab=68.10 E-value=22 Score=23.05 Aligned_cols=49 Identities=6% Similarity=0.060 Sum_probs=36.5
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEEEE
Q 043606 19 SSPYAAMLAAQDVSQRCKERGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRI 79 (101)
Q Consensus 19 ~t~~Aa~~a~~~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~~I 79 (101)
+-=|+.. +.+.+.+.+.++|+..|.+.+ -.....|++.+.+.|++..-.
T Consensus 104 g~Gig~~-ll~~~~~~a~~~g~~~i~l~v-----------~~~N~~a~~~yek~GF~~~g~ 152 (182)
T 2jlm_A 104 GLGLSKH-LMNELIKRAVESEVHVMVGCI-----------DATNVASIQLHQKLGFIHSGT 152 (182)
T ss_dssp TSSHHHH-HHHHHHHHHHHTTCCEEEEEE-----------ETTCHHHHHHHHHTTCEEEEE
T ss_pred CCCHHHH-HHHHHHHHHHHCCceEEEEEE-----------eCCCHHHHHHHHHCCCcEEEE
Confidence 3345554 445688888999999999998 334567999999999987654
No 27
>1z2i_A Malate dehydrogenase; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; HET: NAD; 2.20A {Agrobacterium tumefaciens}
Probab=68.00 E-value=40 Score=26.15 Aligned_cols=73 Identities=22% Similarity=0.228 Sum_probs=57.8
Q ss_pred eeeccCCCCcHHHHHHHHHHHHHHHHHcCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEEEEEecCCC--CCC
Q 043606 11 KVKADRDESSPYAAMLAAQDVSQRCKERGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPI--PTD 88 (101)
Q Consensus 11 gfKg~r~k~t~~Aa~~a~~~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~~I~D~Tpi--phN 88 (101)
-+.+.. --.++++..+.+.++++|++.|+-.|.|+= ++.+|..-..+.++.. .|+-=+..++..|. ||+
T Consensus 87 ~vDg~~-g~G~~~~~~am~~aiekAk~~Gi~~v~vrn-------s~H~G~~g~y~~~aa~-~Gligi~~tNs~~~vaP~G 157 (358)
T 1z2i_A 87 TIDADH-AHGARATYAAMENAMALAEKFGIGAVAIRN-------SSHFGPAGAYALEAAR-QGYIGLAFCNSDSFVRLHD 157 (358)
T ss_dssp EEECSS-CCHHHHHHHHHHHHHHHHHHHSEEEEEEEE-------ECCCSCTHHHHHHHHH-TTSEEEEEECCSCCBCCTT
T ss_pred EEECCC-CcHHHHHHHHHHHHHHHHHHcCEEEEEEeC-------CCCcchHHHHHHHHHH-CCCeEEEEeCCCCeeCCCC
Confidence 466666 778899999999999999999999888875 3889998888877555 68876777776565 888
Q ss_pred CCCC
Q 043606 89 STRR 92 (101)
Q Consensus 89 GcR~ 92 (101)
|-+|
T Consensus 158 g~~~ 161 (358)
T 1z2i_A 158 GAMR 161 (358)
T ss_dssp BSSC
T ss_pred CCCC
Confidence 8543
No 28
>3g8w_A Lactococcal prophage PS3 protein 05; APC61042, acetyltransferase, staphylococcus epidermidis ATCC structural genomics; HET: NHE FLC; 2.70A {Staphylococcus epidermidis atcc 12228}
Probab=67.51 E-value=19 Score=22.23 Aligned_cols=50 Identities=22% Similarity=0.189 Sum_probs=37.2
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEEEEE
Q 043606 19 SSPYAAMLAAQDVSQRCKERGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIE 80 (101)
Q Consensus 19 ~t~~Aa~~a~~~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~~I~ 80 (101)
+.=++.++. +.+.+.+.+.|++.|.+.+ -..-..+++...+.|+....+.
T Consensus 95 g~Gig~~ll-~~~~~~a~~~g~~~i~l~v-----------~~~N~~a~~~y~k~GF~~~g~~ 144 (169)
T 3g8w_A 95 DEIVNRELI-NHIIQYAKEQNIETLMIAI-----------ASNNISAKVFFSSIGFENLAFE 144 (169)
T ss_dssp CHHHHHHHH-HHHHHHHHHTTCCEEEEEE-----------ETTCHHHHHHHHTTTCEEEEEE
T ss_pred CCcHHHHHH-HHHHHHHHHCCCCEEEEEE-----------ecCCHHHHHHHHHcCCEEeeee
Confidence 344554444 5678889999999999988 2334578899999999987664
No 29
>1wtj_A Ureidoglycolate dehydrogenase; NADPH dependent enzyme, oxidoreductase; 1.55A {Pseudomonas syringae PV} PDB: 2cwf_A* 2cwh_A*
Probab=67.13 E-value=41 Score=25.94 Aligned_cols=73 Identities=12% Similarity=0.069 Sum_probs=57.2
Q ss_pred eeeccCCCCcHHHHHHHHHHHHHHHHHcCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEEEEEecCCC--CCC
Q 043606 11 KVKADRDESSPYAAMLAAQDVSQRCKERGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPI--PTD 88 (101)
Q Consensus 11 gfKg~r~k~t~~Aa~~a~~~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~~I~D~Tpi--phN 88 (101)
-+.+.. --.++++..+.+.++++|++.|+-.|.|+= ++.+|..-..+.++.. .|+-=+..++..|. ||+
T Consensus 88 ~vDg~~-g~G~~~~~~am~~aiekAk~~Gi~~v~vrn-------s~H~G~~g~y~~~aa~-~Gligi~~tNs~~~vaP~G 158 (343)
T 1wtj_A 88 RVDACN-GFAQPALAAARSLLIDKARSAGVAILAIRG-------SHHFAALWPDVEPFAE-QGLVALSMVNSMTCVVPHG 158 (343)
T ss_dssp EEECTT-SBHHHHHHHHHHHHHHHHHHHSEEEEEEEE-------EECCSCSHHHHHHHHH-TTCEEEEECCCCSCBCCTT
T ss_pred EEECCC-CcHHHHHHHHHHHHHHHHHHcCEEEEEEeC-------CCCCCchHHHHHHHHH-CCCeEEEEeCCCCeeCCCC
Confidence 466666 778899999999999999999999888875 3779998888877555 67766666666565 888
Q ss_pred CCCC
Q 043606 89 STRR 92 (101)
Q Consensus 89 GcR~ 92 (101)
|-+|
T Consensus 159 g~~~ 162 (343)
T 1wtj_A 159 ARQP 162 (343)
T ss_dssp CSSC
T ss_pred CCCC
Confidence 8543
No 30
>2x06_A L-sulfolactate dehydrogenase; oxidoreductase, hyperthermostable, coenzyme M, methanogens, coenzyme M biosynthesis; HET: NAD; 2.50A {Methanocaldococcus jannaschii}
Probab=66.71 E-value=38 Score=26.21 Aligned_cols=73 Identities=14% Similarity=0.123 Sum_probs=57.2
Q ss_pred eeeccCCCCcHHHHHHHHHHHHHHHHHcCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEEEEEecCCC--CCC
Q 043606 11 KVKADRDESSPYAAMLAAQDVSQRCKERGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPI--PTD 88 (101)
Q Consensus 11 gfKg~r~k~t~~Aa~~a~~~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~~I~D~Tpi--phN 88 (101)
-+.+.. ---+.++..+.+.++++|++.|+-.|.|+= +..+|.--..+.++.. .|+--+..++..|. ||+
T Consensus 78 ~vDg~~-g~G~~~~~~a~~~ai~~Ak~~Gi~~v~v~n-------s~H~G~~g~y~~~aa~-~Gligi~~tn~~p~vaP~G 148 (344)
T 2x06_A 78 VIDGDL-GLGQVVGKKAMELAIKKAKNVGVGVVATRN-------ANHFGIAGYYSELAMN-QDMIGITITNTEPAMAPFG 148 (344)
T ss_dssp EEECTT-BCHHHHHHHHHHHHHHHHHHHSEEEEEEES-------CCCCSCTHHHHHHHHT-TTSEEEEEECCSSCBCCTT
T ss_pred EEECCC-CccHHHHHHHHHHHHHHHHhcCeEEEEecc-------CccccchHHHHHHHHh-cCcEEEEecCCCceeeccC
Confidence 455666 677889999999999999999999988874 3779988888877554 67777777777776 888
Q ss_pred CCCC
Q 043606 89 STRR 92 (101)
Q Consensus 89 GcR~ 92 (101)
|-.|
T Consensus 149 g~~~ 152 (344)
T 2x06_A 149 GKEK 152 (344)
T ss_dssp BCSC
T ss_pred CcCc
Confidence 8543
No 31
>2j8m_A Acetyltransferase PA4866 from P. aeruginosa; GCN5 family, phosphinothricin, methionine sulfone, methionine sulfoximine; 1.44A {Pseudomonas aeruginosa} PDB: 2bl1_A 2j8n_A 2j8r_A* 1yvo_A
Probab=66.16 E-value=22 Score=22.44 Aligned_cols=50 Identities=16% Similarity=0.318 Sum_probs=36.7
Q ss_pred CCcHHHHHHHHHHHHHHHHHcCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEEEE
Q 043606 18 ESSPYAAMLAAQDVSQRCKERGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRI 79 (101)
Q Consensus 18 k~t~~Aa~~a~~~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~~I 79 (101)
++.=++.++ .+.+.+.+.++|+..|.+.+. .....+++...+.|++....
T Consensus 95 rg~Gig~~l-l~~~~~~a~~~g~~~i~l~v~-----------~~N~~a~~~y~k~GF~~~g~ 144 (172)
T 2j8m_A 95 RGKGLGVQL-LQALIERARAQGLHVMVAAIE-----------SGNAASIGLHRRLGFEISGQ 144 (172)
T ss_dssp TTSSHHHHH-HHHHHHHHHHTTCCEEEEEEE-----------TTCHHHHHHHHHTTCEEEEE
T ss_pred cCCCHHHHH-HHHHHHHHHHCCccEEEEEEc-----------CCCHHHHHHHHHCCCEEEee
Confidence 334455554 456888889999999999882 33567889889999988754
No 32
>3bbo_Q Ribosomal protein L18; large ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea}
Probab=66.09 E-value=1.6 Score=31.06 Aligned_cols=50 Identities=22% Similarity=0.370 Sum_probs=35.3
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCcEEEEEEeecCCCcccCCCCCh-HHHHHHHHhCCCe
Q 043606 19 SSPYAAMLAAQDVSQRCKERGITALHIKLRATGGNKTKTPGPGA-QSALRALARSGMK 75 (101)
Q Consensus 19 ~t~~Aa~~a~~~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~gr-~~~lr~l~~~gl~ 75 (101)
..--||..+++.++++|++.||+.|..-. +|...+ || .++..++...||+
T Consensus 110 ~n~~AA~~VG~liAeRA~e~GI~~VvFDR---gg~~Yh----GRVkAladaaRe~GL~ 160 (161)
T 3bbo_Q 110 PTIEVAKKVGEVIASACLEKGITKVAFDR---GGYPYH----GRVKALADAAREKGLQ 160 (161)
T ss_dssp SSHHHHHHHHHHSSSHHHHTSSCCCCCCC---SSSCSS----STTHHHHHHHTTTTCC
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCEEEEeC---CCCcch----HHHHHHHHHHHHhCCc
Confidence 45568888999999999999999985442 333332 34 3455667777876
No 33
>2cy2_A TTHA1209, probable acetyltransferase; structural genomics, unknown function, NPPSFA; HET: ACO; 2.00A {Thermus thermophilus} SCOP: d.108.1.1 PDB: 1wk4_A*
Probab=65.82 E-value=20 Score=21.81 Aligned_cols=50 Identities=6% Similarity=-0.024 Sum_probs=36.8
Q ss_pred cHHHHHHHHHHHHHHHHHcCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEEEEEe
Q 043606 20 SPYAAMLAAQDVSQRCKERGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIED 81 (101)
Q Consensus 20 t~~Aa~~a~~~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~~I~D 81 (101)
.-++..+. +.+.+.+.+.|++.|.+.+. .....+++.+.+.|+......+
T Consensus 103 ~Gig~~ll-~~~~~~~~~~g~~~i~l~~~-----------~~n~~a~~~y~k~Gf~~~~~~~ 152 (174)
T 2cy2_A 103 KGLGRALF-HEGARLLQAEGYGRMLVWVL-----------KENPKGRGFYEHLGGVLLGERE 152 (174)
T ss_dssp SSHHHHHH-HHHHHHHHHTTCCEEEEEEE-----------TTCHHHHHHHHHTTCEEEEEEE
T ss_pred cCHHHHHH-HHHHHHHHhCCCceEEEEEE-----------CCChhHHHHHHHcCCeeeceEE
Confidence 33555444 56788888999999999982 3345788989999999887554
No 34
>2ae6_A Acetyltransferase, GNAT family; GCN5-related N-acetyltransferase (GNAT), alpha-beta, structu genomics, PSI, protein structure initiative; HET: GOL; 2.19A {Enterococcus faecalis} SCOP: d.108.1.1
Probab=65.33 E-value=23 Score=22.34 Aligned_cols=51 Identities=16% Similarity=0.175 Sum_probs=37.7
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEEEEEe
Q 043606 19 SSPYAAMLAAQDVSQRCKERGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIED 81 (101)
Q Consensus 19 ~t~~Aa~~a~~~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~~I~D 81 (101)
+.=++.++. +.+.+.+.++|+..|.+.+ ......|++...+.|+.......
T Consensus 95 g~GiG~~ll-~~~~~~a~~~g~~~i~l~v-----------~~~N~~A~~~Yek~GF~~~~~~~ 145 (166)
T 2ae6_A 95 DQGIGGSLL-SYIKDMAEISGIHKLSLRV-----------MATNQEAIRFYEKHGFVQEAHFK 145 (166)
T ss_dssp TSSHHHHHH-HHHHHHHHHHTCCEEEEEE-----------ETTCHHHHHHHHHTTCEEEEEEE
T ss_pred CCCHHHHHH-HHHHHHHHHCCCCEEEEEe-----------ecCCHHHHHHHHHcCCEEeeEEc
Confidence 344555544 5678888899999999998 33456799999999998875544
No 35
>3d8p_A Acetyltransferase of GNAT family; NP_373092.1, structural GE joint center for structural genomics, JCSG, protein structu initiative; 2.20A {Staphylococcus aureus subsp}
Probab=64.73 E-value=21 Score=21.67 Aligned_cols=49 Identities=18% Similarity=0.146 Sum_probs=36.6
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEEEE
Q 043606 19 SSPYAAMLAAQDVSQRCKERGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRI 79 (101)
Q Consensus 19 ~t~~Aa~~a~~~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~~I 79 (101)
+.-++.++. +.+.+.+.+.|++.|.+.+ ......+++...+.|++....
T Consensus 92 g~Gig~~ll-~~~~~~a~~~g~~~i~l~~-----------~~~n~~a~~~y~k~GF~~~~~ 140 (163)
T 3d8p_A 92 NLKIGKKLL-DKVIMTCKEQNIDGIYLGT-----------IDKFISAQYFYSNNGFREIKR 140 (163)
T ss_dssp TTTHHHHHH-HHHHHHHHHTTCCEEEEEE-----------CTTCHHHHHHHHHTTCEEECG
T ss_pred cCCHHHHHH-HHHHHHHHHCCCeEEEEEe-----------cCCCHHHHHHHHHCCCEEeee
Confidence 334555544 5678888899999999988 334557889999999988754
No 36
>1vbi_A Type 2 malate/lactate dehydrogenase; malate dehydrogenase, NAD(P) binding protein, thermus thermo HB8, structural genomics; HET: NAD; 1.80A {Thermus thermophilus} PDB: 1x0a_A
Probab=64.19 E-value=47 Score=25.57 Aligned_cols=73 Identities=14% Similarity=0.200 Sum_probs=57.1
Q ss_pred eeeccCCCCcHHHHHHHHHHHHHHHHHcCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEEEEEecCCC--CCC
Q 043606 11 KVKADRDESSPYAAMLAAQDVSQRCKERGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPI--PTD 88 (101)
Q Consensus 11 gfKg~r~k~t~~Aa~~a~~~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~~I~D~Tpi--phN 88 (101)
-+.+.. --.++++..+.+.++++|++.|+-.|.|+= ++.+|..-..+.++.. .|+-=+..++..|. ||+
T Consensus 77 ~vDg~~-g~G~~~~~~am~~aiekAk~~Gi~~v~vrn-------s~H~G~~g~y~~~aa~-~Gligi~~tns~~~vaP~G 147 (344)
T 1vbi_A 77 LLDGEH-GFGPRVALKAVEAAQSLARRHGLGAVGVRR-------STHFGMAGLYAEKLAR-EGFVAWVTTNAEPDVVPFG 147 (344)
T ss_dssp EEECTT-BCHHHHHHHHHHHHHHHHHHHSEEEEEEEE-------ECCCCCHHHHHHHHHH-TTCEEEEEECCSCCBCCTT
T ss_pred EEECCC-CcHHHHHHHHHHHHHHHHHHcCEEEEEEeC-------CCCcchHHHHHHHHHH-CCCEEEEEcCCCCeeCCCC
Confidence 456666 778899999999999999999999888875 3889998777877555 68766677776565 888
Q ss_pred CCCC
Q 043606 89 STRR 92 (101)
Q Consensus 89 GcR~ 92 (101)
|-+|
T Consensus 148 g~~~ 151 (344)
T 1vbi_A 148 GREK 151 (344)
T ss_dssp CSSC
T ss_pred CCCC
Confidence 8553
No 37
>1on0_A YYCN protein; structural genomics, alpha-beta protein with anti-parallel B strands, PSI, protein structure initiative; 2.20A {Bacillus subtilis} SCOP: d.108.1.1
Probab=63.79 E-value=13 Score=23.56 Aligned_cols=47 Identities=19% Similarity=0.272 Sum_probs=34.9
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEE
Q 043606 19 SSPYAAMLAAQDVSQRCKERGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIG 77 (101)
Q Consensus 19 ~t~~Aa~~a~~~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~ 77 (101)
+-=|+.++. +.+.+.+.++|+..|.+.+ ......|++...+.|++..
T Consensus 102 g~G~g~~ll-~~~~~~a~~~g~~~i~l~v-----------~~~N~~a~~~Y~k~GF~~~ 148 (158)
T 1on0_A 102 GKGYAKQAL-AALDQAARSMGIRKLSLHV-----------FAHNQTARKLYEQTGFQET 148 (158)
T ss_dssp SSSHHHHHH-HHHHHHHHHHTCCEEEECC-----------CTTCHHHHHHHHHTTCCCC
T ss_pred CCCHHHHHH-HHHHHHHHHCCCCEEEEEE-----------ecCCHHHHHHHHHCCCEEE
Confidence 334555544 5678888999999999888 4445689998999998764
No 38
>2i79_A Acetyltransferase, GNAT family; acetyl coenzyme *A, structur genomics, PSI-2, protein structure initiative; HET: ACO; 2.10A {Streptococcus pneumoniae}
Probab=62.99 E-value=26 Score=22.11 Aligned_cols=50 Identities=12% Similarity=0.290 Sum_probs=37.3
Q ss_pred cHHHHHHHHHHHHHHHHHcC-CcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEEEEEe
Q 043606 20 SPYAAMLAAQDVSQRCKERG-ITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIED 81 (101)
Q Consensus 20 t~~Aa~~a~~~~~~~~~~~g-i~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~~I~D 81 (101)
.=++.. +.+.+.+.+.+.+ +..|.+.+ ......|++..++.|++...+..
T Consensus 101 ~Gig~~-ll~~~~~~a~~~~~~~~i~l~v-----------~~~N~~A~~~yek~GF~~~g~~~ 151 (172)
T 2i79_A 101 NGLGSL-LLEEAIEWAQASGILRRLQLTV-----------QTRNQAAVHLYQKHGFVIEGSQE 151 (172)
T ss_dssp SSHHHH-HHHHHHHHHHHTSSCCEEEEEE-----------ETTCHHHHHHHHHTTCEEEEEEE
T ss_pred CCHHHH-HHHHHHHHHHhcCCeEEEEEEE-----------ECCCHHHHHHHHHCCCEEEeEEe
Confidence 335544 4456788888888 99999999 33456799999999998876543
No 39
>2fe7_A Probable N-acetyltransferase; structural genomics, pseudomonas aerugi PSI, protein structure initiative; 2.00A {Pseudomonas aeruginosa ucbpp-pa14} SCOP: d.108.1.1
Probab=62.81 E-value=23 Score=21.53 Aligned_cols=47 Identities=11% Similarity=0.021 Sum_probs=33.3
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEE
Q 043606 19 SSPYAAMLAAQDVSQRCKERGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIG 77 (101)
Q Consensus 19 ~t~~Aa~~a~~~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~ 77 (101)
+.-++..+. +.+.+.+.+.|+..+.+.+. .....+++.+.+.|++..
T Consensus 102 g~Gig~~ll-~~~~~~~~~~g~~~i~l~~~-----------~~n~~a~~~y~k~Gf~~~ 148 (166)
T 2fe7_A 102 GVGAGRRLL-RELAREAVANDCGRLEWSVL-----------DWNQPAIDFYRSIGALPQ 148 (166)
T ss_dssp C--HHHHHH-HHHHHHHHHTTCSEEEEEEE-----------TTCHHHHHHHHHTTCEEC
T ss_pred CccHHHHHH-HHHHHHHHHCCCCEEEEEEc-----------cCCHHHHHHHHHcCCeEc
Confidence 334555444 56788888999999999882 334578888899998764
No 40
>2vzy_A RV0802C; transferase, GCN5-related N-acetyltransferase, succinyltransferase; HET: FLC; 2.00A {Mycobacterium tuberculosis} PDB: 2vzz_A*
Probab=62.38 E-value=30 Score=22.70 Aligned_cols=52 Identities=10% Similarity=0.052 Sum_probs=37.6
Q ss_pred CcHHHHHHHHHHHHHHHHH-cCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEEEEEec
Q 043606 19 SSPYAAMLAAQDVSQRCKE-RGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDV 82 (101)
Q Consensus 19 ~t~~Aa~~a~~~~~~~~~~-~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~~I~D~ 82 (101)
+.=|+..+. +.+.+.+.+ +|+..|.+.+ -..-..+++.+.+.|+........
T Consensus 119 gkGig~~ll-~~l~~~a~~~~g~~~i~~~v-----------~~~N~~a~~~y~k~GF~~~g~~~~ 171 (218)
T 2vzy_A 119 GHGYGTEMR-AAVLYFAFAELEAQVATSRS-----------FVDNPASIAVSRRNGYRDNGLDRV 171 (218)
T ss_dssp TSSHHHHHH-HHHHHHHHHTSCCSEEEEEE-----------ETTCHHHHHHHHHTTCEEEEEEEE
T ss_pred CCCHHHHHH-HHHHHHHHhhCCceEEEEEe-----------ccCCHHHHHHHHHCCCEEeeeeec
Confidence 344555544 567788877 8999999998 333567889999999987765443
No 41
>3dr6_A YNCA; acetyltransferase, csgid target, essential gene, IDP00086, structural genomics, center for STRU genomics of infectious diseases; HET: MSE; 1.75A {Salmonella typhimurium} SCOP: d.108.1.1 PDB: 3dr8_A*
Probab=62.21 E-value=24 Score=21.45 Aligned_cols=51 Identities=8% Similarity=0.111 Sum_probs=37.5
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEEEEEe
Q 043606 19 SSPYAAMLAAQDVSQRCKERGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIED 81 (101)
Q Consensus 19 ~t~~Aa~~a~~~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~~I~D 81 (101)
+.-++..+ .+.+.+.+.+.|+..+.+.+. ..-..+++.+.+.|++.....+
T Consensus 96 g~Gig~~l-l~~~~~~~~~~g~~~i~~~~~-----------~~n~~a~~~y~k~Gf~~~~~~~ 146 (174)
T 3dr6_A 96 GKGLGRKL-LSRLIDEARRCGKHVMVAGIE-----------SQNAASIRLHHSLGFTVTAQMP 146 (174)
T ss_dssp TSSHHHHH-HHHHHHHHHHTTCSEEEEEEE-----------TTCHHHHHHHHHTTCEEEEEEE
T ss_pred cCCHHHHH-HHHHHHHHHHcCCCEEEEEee-----------cCCHHHHHHHHhCCCEEEEEcc
Confidence 33455544 456788889999999999882 2346788989999998887654
No 42
>1mk4_A Hypothetical protein YQJY; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: d.108.1.1
Probab=61.82 E-value=24 Score=21.38 Aligned_cols=49 Identities=16% Similarity=0.220 Sum_probs=36.7
Q ss_pred CCcHHHHHHHHHHHHHHHHHcCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEEE
Q 043606 18 ESSPYAAMLAAQDVSQRCKERGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGR 78 (101)
Q Consensus 18 k~t~~Aa~~a~~~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~~ 78 (101)
++.-++..+. +.+.+.+.+.|+..+.+.+ -.....+++.+.+.|+....
T Consensus 81 rg~Gig~~ll-~~~~~~~~~~g~~~i~~~~-----------~~~N~~a~~~y~k~Gf~~~~ 129 (157)
T 1mk4_A 81 RKMQIGKQLY-DVFIETVKQRGCTRVKCVT-----------SPVNKVSIAYHTKLGFDIEK 129 (157)
T ss_dssp CHHHHHHHHH-HHHHHHHHTTTCCEEEEEE-----------CTTCHHHHHHHHHTTCEECC
T ss_pred cCCCHHHHHH-HHHHHHHHHCCCcEEEEEE-----------cCCCHHHHHHHHHcCCEEcC
Confidence 3445555544 5678888899999999988 34456788989999998876
No 43
>3fix_A N-acetyltransferase; termoplasma acidophilum, structural GEN PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 2.30A {Thermoplasma acidophilum} PDB: 3f0a_A* 3k9u_A* 3ne7_A*
Probab=61.17 E-value=28 Score=22.00 Aligned_cols=51 Identities=10% Similarity=0.170 Sum_probs=37.3
Q ss_pred CCcHHHHHHHHHHHHHHHHHcCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEEEEE
Q 043606 18 ESSPYAAMLAAQDVSQRCKERGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIE 80 (101)
Q Consensus 18 k~t~~Aa~~a~~~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~~I~ 80 (101)
++.=++.. +.+.+.+.+.+.|++.|.+.+ ......+++...+.|++.....
T Consensus 123 rg~Gig~~-Ll~~~~~~a~~~g~~~i~l~v-----------~~~n~~a~~~y~k~GF~~~~~~ 173 (183)
T 3fix_A 123 THKKIGKT-LLLEAEKIMKKKGILECRLYV-----------HRQNSVGFSFYYKNGFKVEDTD 173 (183)
T ss_dssp CCHHHHHH-HHHHHHHHHHHHTCCEEEEEE-----------ETTCHHHHHHHHHTTCEEEEEC
T ss_pred cCCCHHHH-HHHHHHHHHHHcCCceEEEEE-----------ecCCHHHHHHHHHcCCEEeccc
Confidence 33445554 445688889999999999988 3334678898999999887543
No 44
>2zkr_n 60S ribosomal protein L5; protein-RNA complex, 60S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris}
Probab=60.78 E-value=32 Score=26.52 Aligned_cols=61 Identities=26% Similarity=0.319 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHHHHHHHc---------------------------CCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCC
Q 043606 21 PYAAMLAAQDVSQRCKER---------------------------GITALHIKLRATGGNKTKTPGPGAQSALRALARSG 73 (101)
Q Consensus 21 ~~Aa~~a~~~~~~~~~~~---------------------------gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~g 73 (101)
--||..++..+++++.+. |+..+.+-+ ||.+..- |---.+++++....|
T Consensus 95 ~aAAy~tGlLlArRal~k~~ld~~y~G~~e~~g~~~~ve~~~~~~gi~~vvfDr---Gl~rytt-ggRVfa~akGArDgG 170 (297)
T 2zkr_n 95 YAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDA---GLARTTT-GNKVFGALKGAVDGG 170 (297)
T ss_dssp HHHHHHHHHHHHHHHHCCCSCCCCCSSCCSSSSCCCCCSSSCSSSCCCBEEEEC---TTSCCCT-TCHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHhhccchhhcCccccccccccccccccCCCceEEEEec---CCcccCC-CchHHHHHHHHHhcC
Confidence 347788889999999988 777776655 3333211 111256788888899
Q ss_pred CeEEEEEecCCCCCCCCCCCC
Q 043606 74 MKIGRIEDVTPIPTDSTRRKG 94 (101)
Q Consensus 74 l~I~~I~D~TpiphNGcR~~K 94 (101)
|. +||+-.|-|.
T Consensus 171 L~---------~Phs~~~fpg 182 (297)
T 2zkr_n 171 LS---------IPHSTKRFPG 182 (297)
T ss_dssp CB---------CCCCGGGSCC
T ss_pred cc---------cCCCCccCCC
Confidence 97 4888777664
No 45
>2z10_A Ribosomal-protein-alanine acetyltransferase; alpha/beta protein, acyltransferase, structural genomics, NPPSFA; HET: IYR; 1.77A {Thermus thermophilus} PDB: 2z0z_A* 2z11_A* 2zxv_A*
Probab=60.49 E-value=30 Score=22.10 Aligned_cols=52 Identities=15% Similarity=0.045 Sum_probs=37.1
Q ss_pred CCcHHHHHHHHHHHHHHHHHc-CCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEEEEEe
Q 043606 18 ESSPYAAMLAAQDVSQRCKER-GITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIED 81 (101)
Q Consensus 18 k~t~~Aa~~a~~~~~~~~~~~-gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~~I~D 81 (101)
++.-++..+. +.+.+.+.+. |+..|.+.+ -.....+++.+.+.|+.......
T Consensus 101 rg~Gig~~ll-~~~~~~a~~~~g~~~i~~~v-----------~~~N~~a~~~y~k~GF~~~g~~~ 153 (194)
T 2z10_A 101 WGSPANKEAK-YLLLRHAFEVLRAERVQFKV-----------DLRNERSQRALEALGAVREGVLR 153 (194)
T ss_dssp TTSSHHHHHH-HHHHHHHHHTSCCSEEEEEE-----------ETTCHHHHHHHHHHTCEEEEEEE
T ss_pred hCCcHHHHHH-HHHHHHHHhhCCceEEEEEe-----------cCCCHHHHHHHHHcCCcEEEecc
Confidence 3444555544 5577788775 999999998 33456788999999998766544
No 46
>3pp9_A Putative streptothricin acetyltransferase; toxin production resistance, infectious diseases, structural genomics; HET: MSE ACO; 1.60A {Bacillus anthracis}
Probab=59.93 E-value=30 Score=21.89 Aligned_cols=52 Identities=15% Similarity=0.222 Sum_probs=37.9
Q ss_pred CCcHHHHHHHHHHHHHHHHHcCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEEEEEe
Q 043606 18 ESSPYAAMLAAQDVSQRCKERGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIED 81 (101)
Q Consensus 18 k~t~~Aa~~a~~~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~~I~D 81 (101)
++.-++.++. +.+.+.+.++|+..+.+.+. .....+++...+.|++......
T Consensus 113 rg~Gig~~ll-~~~~~~~~~~g~~~i~~~~~-----------~~N~~a~~~y~k~Gf~~~~~~~ 164 (187)
T 3pp9_A 113 RTLGVGKRLI-AQAKQWAKEGNMPGIMLETQ-----------NNNVAACKFYEKCGFVIGGFDF 164 (187)
T ss_dssp TTSSHHHHHH-HHHHHHHHHTTCCEEEEEEE-----------TTCHHHHHHHHHTTCEEEEEES
T ss_pred hcCCHHHHHH-HHHHHHHHHCCCCEEEEEEe-----------cCCHHHHHHHHHCCCEEeceEe
Confidence 3344555544 56788889999999999982 3345788989999999877543
No 47
>2i6c_A Putative acetyltransferase; GNAT family, structural genomic, structur genomics, PSI-2, protein structure initiative; HET: MSE EPE; 1.30A {Pseudomonas aeruginosa} SCOP: d.108.1.1 PDB: 3pgp_A*
Probab=59.68 E-value=26 Score=21.13 Aligned_cols=51 Identities=14% Similarity=0.074 Sum_probs=37.7
Q ss_pred CcHHHHHHHHHHHHHHHHH-cCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEEEEEe
Q 043606 19 SSPYAAMLAAQDVSQRCKE-RGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIED 81 (101)
Q Consensus 19 ~t~~Aa~~a~~~~~~~~~~-~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~~I~D 81 (101)
+.=++.++. +.+.+.+.+ .|+..+.+.+ ......+++.+.+.|++......
T Consensus 89 g~Gig~~l~-~~~~~~~~~~~g~~~i~l~~-----------~~~n~~a~~~y~k~Gf~~~~~~~ 140 (160)
T 2i6c_A 89 GLGVARYLI-GVMENLAREQYKARLMKISC-----------FNANAAGLLLYTQLGYQPRAIAE 140 (160)
T ss_dssp TTTHHHHHH-HHHHHHHHHHHCCSEEEEEE-----------ETTCHHHHHHHHHTTCEEEEEEE
T ss_pred CCCHHHHHH-HHHHHHHHhhCCccEEEEEE-----------ecCCHHHHHHHHHcCCEEccccc
Confidence 344555544 567888888 7999999998 23356788989999999887554
No 48
>3igr_A Ribosomal-protein-S5-alanine N-acetyltransferase; fisch MCSG, structural genomics, midwest center for structural GE protein structure initiative; HET: MSE; 2.00A {Vibrio fischeri} SCOP: d.108.1.0
Probab=59.58 E-value=29 Score=21.61 Aligned_cols=50 Identities=10% Similarity=0.040 Sum_probs=37.4
Q ss_pred CcHHHHHHHHHHHHHHH-HHcCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEEEEE
Q 043606 19 SSPYAAMLAAQDVSQRC-KERGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIE 80 (101)
Q Consensus 19 ~t~~Aa~~a~~~~~~~~-~~~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~~I~ 80 (101)
+.=++..+. +.+.+.+ .++|+..|.+.+ -..-..+++.+.+.|++.....
T Consensus 109 g~Gig~~ll-~~~~~~a~~~~g~~~i~~~v-----------~~~N~~a~~~y~k~GF~~~g~~ 159 (184)
T 3igr_A 109 GKGIMRRAV-NVTIDWMFKAQNLHRIMAAY-----------IPRNEKSAKVLAALGFVKEGEA 159 (184)
T ss_dssp TSSHHHHHH-HHHHHHHHHTSCCSEEEEEE-----------CTTCHHHHHHHHHTTCEEEEEE
T ss_pred cCcHHHHHH-HHHHHHHHhhCCceEEEEEe-----------cCCCHHHHHHHHHcCCEeeeee
Confidence 344555544 5577788 778999999999 4445689999999999887654
No 49
>2q7b_A Acetyltransferase, GNAT family; NP_689019.1, structural GEN joint center for structural genomics, JCSG; HET: MSE FLC; 2.00A {Streptococcus agalactiae 2603V}
Probab=59.14 E-value=32 Score=21.96 Aligned_cols=47 Identities=9% Similarity=0.011 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHHHHHHcCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEEEEE
Q 043606 22 YAAMLAAQDVSQRCKERGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIE 80 (101)
Q Consensus 22 ~Aa~~a~~~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~~I~ 80 (101)
++..+. +.+.+.+.+.|++.|.+.+. .....+++.+++.|+......
T Consensus 114 ig~~ll-~~~~~~a~~~g~~~i~l~~~-----------~~N~~a~~~y~k~GF~~~~~~ 160 (181)
T 2q7b_A 114 LGRKLF-ERFMLFARASKFTRIVLDTP-----------EKEKRSHFFYENQGFKQITRD 160 (181)
T ss_dssp HHHHHH-HHHHHHHHHTTCCEEEEEEE-----------TTCHHHHHHHHTTTCEEECTT
T ss_pred HHHHHH-HHHHHHHHHCCCcEEEEEec-----------CCCHHHHHHHHHCCCEEeeee
Confidence 555544 56788888999999999882 234578898999999876543
No 50
>4evy_A Aminoglycoside N(6')-acetyltransferase type 1; center for structural genomics of infectious diseases (csgid national institute of allergy and infectious diseases; HET: TOY; 1.77A {Acinetobacter haemolyticus} PDB: 4f0y_A 4e8o_A
Probab=58.93 E-value=30 Score=21.56 Aligned_cols=48 Identities=15% Similarity=0.038 Sum_probs=35.5
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEEE
Q 043606 19 SSPYAAMLAAQDVSQRCKERGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGR 78 (101)
Q Consensus 19 ~t~~Aa~~a~~~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~~ 78 (101)
+.=++.++. +.+.+.+.+.|+..|.+.+. .....+++...+.|+....
T Consensus 109 g~Gig~~Ll-~~~~~~a~~~g~~~i~l~~~-----------~~N~~a~~~y~k~GF~~~~ 156 (166)
T 4evy_A 109 RSGVATMLI-RQAEVWAKQFSCTEFASDAA-----------LDNVISHAMHRSLGFQETE 156 (166)
T ss_dssp TSSHHHHHH-HHHHHHHHHTTCCEEEEEEE-----------TTCHHHHHHHHHTTCEEEE
T ss_pred cCCHHHHHH-HHHHHHHHHcCCCEEEEecC-----------CCCHHHHHHHHHcCCEecc
Confidence 344555544 56788899999999999982 3355788888999998764
No 51
>1s3z_A Aminoglycoside 6'-N-acetyltransferase; GNAT, aminoglycoside ribostamycin; HET: COA RIO; 2.00A {Salmonella enteritidis} SCOP: d.108.1.1 PDB: 1s5k_A* 1s60_A* 2vbq_A*
Probab=58.24 E-value=30 Score=21.33 Aligned_cols=47 Identities=13% Similarity=0.124 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHHHHHHcCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEEEE
Q 043606 21 PYAAMLAAQDVSQRCKERGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRI 79 (101)
Q Consensus 21 ~~Aa~~a~~~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~~I 79 (101)
=++..+. +.+.+.+.+.|+..|.+.+ ......+++...+.|++....
T Consensus 111 Gig~~ll-~~~~~~~~~~g~~~i~l~~-----------~~~N~~a~~~y~k~GF~~~~~ 157 (165)
T 1s3z_A 111 GVAKQLI-AAVQRWGTNKGCREMASDT-----------SPENTISQKVHQALGFEETER 157 (165)
T ss_dssp SHHHHHH-HHHHHHHHHTTCSEEEEEE-----------CTTCHHHHHHHHHTTCEEEEE
T ss_pred cHHHHHH-HHHHHHHHHCCCCEEEEec-----------CcCCHHHHHHHHHcCCeEeee
Confidence 3555444 5678888999999999998 334467888889999987653
No 52
>2g8y_A Malate/L-lactate dehydrogenases; NAD, E.coli, structural GENO PSI, protein structure initiative, midwest center for struc genomics, MCSG; HET: NAD 1PE; 2.15A {Escherichia coli}
Probab=58.05 E-value=66 Score=25.26 Aligned_cols=73 Identities=19% Similarity=0.145 Sum_probs=57.5
Q ss_pred eeeccCCCCcHHHHHHHHHHHHHHHHHcCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEEEEEecCC----CC
Q 043606 11 KVKADRDESSPYAAMLAAQDVSQRCKERGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTP----IP 86 (101)
Q Consensus 11 gfKg~r~k~t~~Aa~~a~~~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~~I~D~Tp----ip 86 (101)
-+.+.. ---++++..+.+.++++|++.|+-.|.|+= ++.+|..-..+.++.. .|+--+..++..| .|
T Consensus 104 ~vDg~~-g~G~~~~~~am~~aiekAk~~Gig~v~vrn-------s~H~G~~g~y~~~aa~-~Gligi~~tNs~~~~~vaP 174 (385)
T 2g8y_A 104 TLDGDR-AFGQVAAHEAMALGIEKAHQHGIAAVALHN-------SHHIGRIGYWAEQCAA-AGFVSIHFVSVVGIPMVAP 174 (385)
T ss_dssp EEECTT-BCHHHHHHHHHHHHHHHHHHHSEEEEEEEE-------EECCCCHHHHHHHHHH-TTCEEEEEEEECSCCCBCC
T ss_pred EEECCC-CcHHHHHHHHHHHHHHHHHHcCEEEEEEeC-------CCCcchHHHHHHHHHH-CCCEEEEEecCCCCceeCC
Confidence 466666 778899999999999999999999888875 3789998877877555 6877667777766 48
Q ss_pred CCCCCC
Q 043606 87 TDSTRR 92 (101)
Q Consensus 87 hNGcR~ 92 (101)
|+|-+|
T Consensus 175 ~GG~~~ 180 (385)
T 2g8y_A 175 FHGRDS 180 (385)
T ss_dssp TTCSSC
T ss_pred CCCCCC
Confidence 888543
No 53
>2oh1_A Acetyltransferase, GNAT family; YP_013287.1, structural genom joint center for structural genomics, JCSG, protein structu initiative; HET: MSE UNL; 1.46A {Listeria monocytogenes str}
Probab=57.24 E-value=32 Score=21.32 Aligned_cols=50 Identities=6% Similarity=0.038 Sum_probs=36.6
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEEEEE
Q 043606 19 SSPYAAMLAAQDVSQRCKERGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIE 80 (101)
Q Consensus 19 ~t~~Aa~~a~~~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~~I~ 80 (101)
+.=++.++. +.+.+.+.+.|++.|.+.+ ......+++...+.|++.....
T Consensus 117 g~Gig~~ll-~~~~~~a~~~g~~~i~l~~-----------~~~N~~a~~~y~k~GF~~~~~~ 166 (179)
T 2oh1_A 117 GISLSKQMI-YFAEKLGIEMSVPFIRLDC-----------IESNETLNQMYVRYGFQFSGKK 166 (179)
T ss_dssp TSCHHHHHH-HHHHHHHHHTTCCEEEEEE-----------ETTCHHHHHHHHHTTCEEEEEE
T ss_pred CCCHHHHHH-HHHHHHHHHcCCCEEEEEe-----------cCCcHHHHHHHHHCCCEEeccc
Confidence 334555544 5678888899999999888 3345678888899999877654
No 54
>3i9s_A Integron cassette protein; oyster POND, woods HOLE, acetyltransferase, structural genomics, PSI-2, protein structure initiative; 2.20A {Vibrio cholerae}
Probab=57.18 E-value=28 Score=21.96 Aligned_cols=47 Identities=9% Similarity=0.010 Sum_probs=34.9
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEE
Q 043606 19 SSPYAAMLAAQDVSQRCKERGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIG 77 (101)
Q Consensus 19 ~t~~Aa~~a~~~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~ 77 (101)
+.=++.++. +.+.+.+.+.|+..|.+.+ ......+++...+.|+...
T Consensus 117 g~Gig~~ll-~~~~~~a~~~g~~~i~l~~-----------~~~N~~a~~~y~k~GF~~~ 163 (183)
T 3i9s_A 117 GKGIGLQLM-KHLATIAITHNCQRLDWTA-----------ESTNPTAGKFYKSIGASLI 163 (183)
T ss_dssp TSCHHHHHH-HHHHHHHHHTTEEEEEEEE-----------ETTCHHHHHHHHHTTCEEC
T ss_pred CCCHHHHHH-HHHHHHHHHcCCCEEEEEE-----------ecCChHHHHHHHHcCCcee
Confidence 334555544 5678899999999999988 2345678888899998875
No 55
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=56.97 E-value=33 Score=23.65 Aligned_cols=50 Identities=12% Similarity=0.142 Sum_probs=32.8
Q ss_pred HHHHHHHHHcCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEEEEE
Q 043606 29 QDVSQRCKERGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIE 80 (101)
Q Consensus 29 ~~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~~I~ 80 (101)
+.+++.+.++|+..|++....+..... .+...+..-+.|...||+|.++.
T Consensus 22 ~~~l~~~~~~G~~~vEl~~~~~~~~~~--~~~~~~~~~~~~~~~gl~~~~~~ 71 (272)
T 2q02_A 22 EAFFRLVKRLEFNKVELRNDMPSGSVT--DDLNYNQVRNLAEKYGLEIVTIN 71 (272)
T ss_dssp HHHHHHHHHTTCCEEEEETTSTTSSTT--TTCCHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHcCCCEEEeeccccccccc--cccCHHHHHHHHHHcCCeEEech
Confidence 456788899999999997511100000 12345556677888999999885
No 56
>2fia_A Acetyltransferase; structural genomics, PSI, protein structu initiative, midwest center for structural genomics, MCSG; 2.60A {Enterococcus faecalis} SCOP: d.108.1.1
Probab=56.88 E-value=30 Score=20.85 Aligned_cols=51 Identities=12% Similarity=0.150 Sum_probs=37.5
Q ss_pred cHHHHHHHHHHHHHHHHHcCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEEEEEec
Q 043606 20 SPYAAMLAAQDVSQRCKERGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDV 82 (101)
Q Consensus 20 t~~Aa~~a~~~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~~I~D~ 82 (101)
.=++..+. +.+.+.+.+.|++.+.+.+ ......+++...+.|+......+.
T Consensus 90 ~Gig~~ll-~~~~~~~~~~g~~~i~~~~-----------~~~N~~a~~~y~k~Gf~~~~~~~~ 140 (162)
T 2fia_A 90 KGYGSLLF-HELEKRAVWEGRRKMYAQT-----------NHTNHRMIRFFESKGFTKIHESLQ 140 (162)
T ss_dssp TTHHHHHH-HHHHHHHHTTTCCEEEEEE-----------ETTCHHHHHHHHHTTCEEEEEECC
T ss_pred CCHHHHHH-HHHHHHHHHCCCCEEEEEe-----------cCCCHHHHHHHHHCCCEEEeeEee
Confidence 33455444 5678888889999999988 233467889899999988766554
No 57
>2eui_A Probable acetyltransferase; dimer, structural genomics, PSI, protein structure initiative; 2.80A {Pseudomonas aeruginosa PAO1} SCOP: d.108.1.1
Probab=56.76 E-value=23 Score=21.07 Aligned_cols=48 Identities=15% Similarity=0.158 Sum_probs=34.3
Q ss_pred CCcHHHHHHHHHHHHHHHHHcCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEE
Q 043606 18 ESSPYAAMLAAQDVSQRCKERGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIG 77 (101)
Q Consensus 18 k~t~~Aa~~a~~~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~ 77 (101)
++.-++..+. +.+.+.+.+.|+..+.+.+. .....+++.+.+.|++..
T Consensus 91 rg~Gig~~ll-~~~~~~~~~~g~~~i~~~~~-----------~~N~~a~~~y~k~Gf~~~ 138 (153)
T 2eui_A 91 RRQLVADHLL-QHAKQMARETHAVRMRVSTS-----------VDNEVAQKVYESIGFRED 138 (153)
T ss_dssp CHHHHHHHHH-HHHHHHHHHTTEEEEEEEEE-----------TTCHHHHHHHHTTTCBCC
T ss_pred hcCChHHHHH-HHHHHHHHHcCCCEEEEEEe-----------cCCHHHHHHHHHcCCEEe
Confidence 3444555544 56788889999999999882 234678888888888754
No 58
>2b5g_A Diamine acetyltransferase 1; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: ALY; 1.70A {Homo sapiens} SCOP: d.108.1.1 PDB: 2b4d_A* 2jev_A* 2g3t_A 2f5i_A 2b3u_A 2b3v_A* 2b4b_A* 2b58_A* 2fxf_A* 3bj7_A* 3bj8_A*
Probab=56.44 E-value=32 Score=21.12 Aligned_cols=46 Identities=11% Similarity=0.091 Sum_probs=33.4
Q ss_pred cHHHHHHHHHHHHHHHHHcCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEE
Q 043606 20 SPYAAMLAAQDVSQRCKERGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIG 77 (101)
Q Consensus 20 t~~Aa~~a~~~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~ 77 (101)
.-++..+. +.+.+.+.+.|++.|.+.+. .....+++.+.+.|++..
T Consensus 103 ~Gig~~ll-~~~~~~~~~~g~~~i~l~~~-----------~~N~~a~~~y~k~Gf~~~ 148 (171)
T 2b5g_A 103 FGIGSEIL-KNLSQVAMRCRCSSMHFLVA-----------EWNEPSINFYKRRGASDL 148 (171)
T ss_dssp SSHHHHHH-HHHHHHHHHHTCSEEEEEEE-----------TTCHHHHHHHHTTTCEEH
T ss_pred CCHHHHHH-HHHHHHHHHCCCCEEEEEEc-----------ccCHHHHHHHHHcCCEec
Confidence 34555444 56788888999999999982 334578888888898764
No 59
>1ais_A TBP, protein (tata-binding protein); hyperthermophIle, ribosome binding, complex (ribosome binding/ DNA); HET: DNA 5IU; 2.10A {Pyrococcus woesei} SCOP: d.129.1.1 d.129.1.1 PDB: 1d3u_A* 1pcz_A
Probab=56.38 E-value=12 Score=26.51 Aligned_cols=36 Identities=22% Similarity=0.230 Sum_probs=31.9
Q ss_pred eeeeeccceeeccCCCCcHHHHHHHHHHHHHHHHHcCCc
Q 043606 3 LERITGGMKVKADRDESSPYAAMLAAQDVSQRCKERGIT 41 (101)
Q Consensus 3 ~~~SsG~~gfKg~r~k~t~~Aa~~a~~~~~~~~~~~gi~ 41 (101)
+.+|+|-+.-.|++ +.-.+..|++++++.++++|++
T Consensus 58 lIF~SGKiv~TGak---S~~~~~~a~~~i~~~L~~lG~~ 93 (182)
T 1ais_A 58 LIFSSGKLVVTGAK---SVQDIERAVAKLAQKLKSIGVK 93 (182)
T ss_dssp EECTTSEEEEEEES---SHHHHHHHHHHHHHHHHHTTCC
T ss_pred EEeCCCeEEEecCC---CHHHHHHHHHHHHHHHHHcCCC
Confidence 45789999999998 7788999999999999999986
No 60
>2x7b_A N-acetyltransferase SSO0209; HET: COA; 1.95A {Sulfolobus solfataricus}
Probab=56.37 E-value=35 Score=21.54 Aligned_cols=51 Identities=10% Similarity=0.102 Sum_probs=37.9
Q ss_pred CcHHHHHHHHHHHHHHHHHc-CCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEEEEEe
Q 043606 19 SSPYAAMLAAQDVSQRCKER-GITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIED 81 (101)
Q Consensus 19 ~t~~Aa~~a~~~~~~~~~~~-gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~~I~D 81 (101)
+.=++.++. +.+.+.+.+. |+..|.+.+ ......|++...+.|++......
T Consensus 101 g~GiG~~Ll-~~~~~~a~~~~g~~~i~l~v-----------~~~N~~A~~~Yek~GF~~~~~~~ 152 (168)
T 2x7b_A 101 RKGIATTLL-EASMKSMKNDYNAEEIYLEV-----------RVSNYPAIALYEKLNFKKVKVLK 152 (168)
T ss_dssp TSSHHHHHH-HHHHHHHHHTTCCSEEEEEE-----------ETTCHHHHHHHHHTTCEEEEEET
T ss_pred ccCHHHHHH-HHHHHHHHHhcCeeEEEEEE-----------EeCCHHHHHHHHHCCCEEEEEee
Confidence 334555544 5678888888 999999998 33346789989999999877654
No 61
>1yr0_A AGR_C_1654P, phosphinothricin acetyltransferase; structural genomics, protein structure initiative, NYSGXRC, PSI; 2.00A {Agrobacterium tumefaciens str} SCOP: d.108.1.1
Probab=55.67 E-value=36 Score=21.45 Aligned_cols=50 Identities=10% Similarity=0.138 Sum_probs=36.7
Q ss_pred CCcHHHHHHHHHHHHHHHHHcCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEEEE
Q 043606 18 ESSPYAAMLAAQDVSQRCKERGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRI 79 (101)
Q Consensus 18 k~t~~Aa~~a~~~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~~I 79 (101)
++.=++..+ .+.+.+.+.+.|+..|.+.+. .....+++...+.|++....
T Consensus 96 rg~Gig~~l-l~~~~~~a~~~g~~~i~l~v~-----------~~N~~a~~~y~k~GF~~~g~ 145 (175)
T 1yr0_A 96 RGHGIGKRL-MQALIDHAGGNDVHVLIAAIE-----------AENTASIRLHESLGFRVVGR 145 (175)
T ss_dssp TTSSHHHHH-HHHHHHHHHTTTCCEEEEEEE-----------TTCHHHHHHHHHTTCEEEEE
T ss_pred cCCCHHHHH-HHHHHHHHHhCCccEEEEEec-----------CCCHHHHHHHHHCCCEEEEE
Confidence 344455554 456788888999999998882 33567889899999987654
No 62
>2r1i_A GCN5-related N-acetyltransferase; YP_831484.1, putative acetyltransferase, arthrobacter SP. FB acetyltransferase (GNAT) family; HET: MSE; 1.65A {Arthrobacter SP}
Probab=54.69 E-value=32 Score=21.10 Aligned_cols=45 Identities=16% Similarity=0.136 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHHHHHcCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEEE
Q 043606 22 YAAMLAAQDVSQRCKERGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGR 78 (101)
Q Consensus 22 ~Aa~~a~~~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~~ 78 (101)
++.+ +.+.+.+.+.+.|+..|.+.+. .....+++...+.|++...
T Consensus 114 ig~~-ll~~~~~~a~~~g~~~i~~~~~-----------~~n~~a~~~y~k~Gf~~~~ 158 (172)
T 2r1i_A 114 LGSA-LLAASCGLVRSRGGALLEINVD-----------GEDTDARRFYEARGFTNTE 158 (172)
T ss_dssp HHHH-HHHHHHHHHHHTTCCEEEEEEE-----------TTCHHHHHHHHTTTCBSSC
T ss_pred HHHH-HHHHHHHHHHHCCCCEEEEEEc-----------CCCHHHHHHHHHCCCEecc
Confidence 4444 4456778888899999999882 3345788888888987653
No 63
>1mp9_A Tata-binding protein; transcription regulation, DNA-binding protein, transcription factor, DNA binding protein; 2.00A {Sulfolobus acidocaldarius} SCOP: d.129.1.1 d.129.1.1
Probab=54.38 E-value=15 Score=26.37 Aligned_cols=36 Identities=22% Similarity=0.253 Sum_probs=32.0
Q ss_pred eeeeeccceeeccCCCCcHHHHHHHHHHHHHHHHHcCCc
Q 043606 3 LERITGGMKVKADRDESSPYAAMLAAQDVSQRCKERGIT 41 (101)
Q Consensus 3 ~~~SsG~~gfKg~r~k~t~~Aa~~a~~~~~~~~~~~gi~ 41 (101)
+.+++|-+.-.|++ +.-.+..|++++++.++++|++
T Consensus 62 lIF~SGKiv~TGak---S~e~a~~a~~~i~~~L~~lG~~ 97 (198)
T 1mp9_A 62 LIFKSGKMVVTGAK---STDELIKAVKRIIKTLKKYGMQ 97 (198)
T ss_dssp EECTTSEEEEECCS---SHHHHHHHHHHHHHHHHHTTCC
T ss_pred EEeCCCeEEEeccC---CHHHHHHHHHHHHHHHHHcCCc
Confidence 56789999999998 7788999999999999999986
No 64
>2z8u_A Tata-box-binding protein; transcription, DNA-binding protein, transcription factor, transcription regulation; 1.90A {Methanococcus jannaschii}
Probab=54.37 E-value=13 Score=26.45 Aligned_cols=36 Identities=22% Similarity=0.292 Sum_probs=31.9
Q ss_pred eeeeeccceeeccCCCCcHHHHHHHHHHHHHHHHHcCCc
Q 043606 3 LERITGGMKVKADRDESSPYAAMLAAQDVSQRCKERGIT 41 (101)
Q Consensus 3 ~~~SsG~~gfKg~r~k~t~~Aa~~a~~~~~~~~~~~gi~ 41 (101)
+.+++|-+.-.|++ +.-.+..|++++++.++++|++
T Consensus 62 lIF~SGKiv~TGAk---S~e~a~~a~~~~~~~L~~lg~~ 97 (188)
T 2z8u_A 62 LIFRSGKVNCTGAK---SKEEAEIAIKKIIKELKDAGID 97 (188)
T ss_dssp EECTTSEEEEEEES---SHHHHHHHHHHHHHHHHHTTCC
T ss_pred EEeCCCeEEEecCC---CHHHHHHHHHHHHHHHHhcCCC
Confidence 56789999999998 7888999999999999999985
No 65
>3lod_A Putative acyl-COA N-acyltransferase; structural genomics, PSI2, MCSG, structure initiative; 2.50A {Klebsiella pneumoniae subsp}
Probab=53.76 E-value=35 Score=20.73 Aligned_cols=49 Identities=12% Similarity=0.231 Sum_probs=35.7
Q ss_pred CCcHHHHHHHHHHHHHHHHHcCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEEE
Q 043606 18 ESSPYAAMLAAQDVSQRCKERGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGR 78 (101)
Q Consensus 18 k~t~~Aa~~a~~~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~~ 78 (101)
++.=++.++. +.+.+.+.+.|+..|.+.+. .....+++...+.|+....
T Consensus 87 rg~Gig~~ll-~~~~~~~~~~g~~~i~l~~~-----------~~n~~a~~~y~~~GF~~~~ 135 (162)
T 3lod_A 87 RGQQLGEKLL-AALEAKARQRDCHTLRLETG-----------IHQHAAIALYTRNGYQTRC 135 (162)
T ss_dssp CSSSHHHHHH-HHHHHHHHTTTCCEEEEEEE-----------TTCHHHHHHHHHTTCEEEC
T ss_pred cCCCHHHHHH-HHHHHHHHHCCCcEEEEEec-----------CCCHHHHHHHHHcCCEEcc
Confidence 3344555544 56888899999999999882 2345688888999998754
No 66
>1u6m_A Acetyltransferase, GNAT family; structural genomics, PSI, protein structure initiative; 2.40A {Enterococcus faecalis} SCOP: d.108.1.1
Probab=53.72 E-value=31 Score=22.46 Aligned_cols=52 Identities=17% Similarity=0.166 Sum_probs=37.8
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEEEEEec
Q 043606 19 SSPYAAMLAAQDVSQRCKERGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDV 82 (101)
Q Consensus 19 ~t~~Aa~~a~~~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~~I~D~ 82 (101)
+.=++.++. +.+.+.|++.|+..|.+.+ ......|++--++.|++.....+.
T Consensus 126 g~GiG~~Ll-~~~~~~a~~~g~~~i~L~v-----------~~~N~~A~~fY~k~GF~~~~~~~~ 177 (199)
T 1u6m_A 126 GMGIGSKLL-DALPEVAKASGKQALGLNV-----------DFDNPGARKLYASKGFKDVTTMTI 177 (199)
T ss_dssp TSSHHHHHH-HTHHHHHHTTTCSEEEEEE-----------ETTCHHHHHHHHTTTCEEEEEEEE
T ss_pred CCCHHHHHH-HHHHHHHHHcCCCEEEEEE-----------ecCCHHHHHHHHHCCCEEccEEEe
Confidence 334455544 5678889999999999998 333457888888999988765543
No 67
>2cnt_A Modification of 30S ribosomal subunit protein S18; N-alpha acetylation, GCN5-N-acetyltransferase, ribosomal Pro acetyltransferase, GNAT; HET: COA; 2.4A {Salmonella typhimurium} PDB: 2cnm_A* 2cns_A*
Probab=53.37 E-value=38 Score=21.05 Aligned_cols=49 Identities=18% Similarity=0.344 Sum_probs=35.5
Q ss_pred cHHHHHHHHHHHHHHHHHcCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEEEEE
Q 043606 20 SPYAAMLAAQDVSQRCKERGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIE 80 (101)
Q Consensus 20 t~~Aa~~a~~~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~~I~ 80 (101)
.=++..+. +.+.+.+.+.|+..|.+.+. .....+++...+.|++.....
T Consensus 78 ~Gig~~ll-~~~~~~~~~~g~~~i~l~v~-----------~~N~~a~~~y~k~GF~~~~~~ 126 (160)
T 2cnt_A 78 RGLGRMLL-EHLIDELETRGVVTLWLEVR-----------ASNAAAIALYESLGFNEATIR 126 (160)
T ss_dssp SSHHHHHH-HHHHHHHHHTTCCEEEEEEE-----------TTCHHHHHHHHHHTCEEEEEE
T ss_pred CCHHHHHH-HHHHHHHHHcCCcEEEEEEe-----------cCCHHHHHHHHHCCCEEEEEE
Confidence 33555544 56788888999999999883 234578888899998876543
No 68
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=53.16 E-value=12 Score=26.48 Aligned_cols=44 Identities=11% Similarity=0.071 Sum_probs=32.1
Q ss_pred HHHHHHHHHcCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEEEEE
Q 043606 29 QDVSQRCKERGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIE 80 (101)
Q Consensus 29 ~~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~~I~ 80 (101)
+.+++.+.++|+..|++.. ..+....+...+.|...||+|.++.
T Consensus 41 ~~~l~~~~~~G~~~vEl~~--------~~~~~~~~~~~~~l~~~gl~v~~~~ 84 (287)
T 3kws_A 41 NEKLDFMEKLGVVGFEPGG--------GGLAGRVNEIKQALNGRNIKVSAIC 84 (287)
T ss_dssp HHHHHHHHHTTCCEEECBS--------TTCGGGHHHHHHHHTTSSCEECEEE
T ss_pred HHHHHHHHHcCCCEEEecC--------CchHHHHHHHHHHHHHcCCeEEEEe
Confidence 4578889999999999887 3233334445566777899998874
No 69
>1z4e_A Transcriptional regulator; nysgxrc target T2017, GNAT fold, structural genomics, PSI, P structure initiative; 2.00A {Bacillus halodurans} SCOP: d.108.1.1
Probab=52.78 E-value=36 Score=20.79 Aligned_cols=50 Identities=22% Similarity=0.248 Sum_probs=35.0
Q ss_pred CCcHHHHHHHHHHHHHHHHHcCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEEEE
Q 043606 18 ESSPYAAMLAAQDVSQRCKERGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRI 79 (101)
Q Consensus 18 k~t~~Aa~~a~~~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~~I 79 (101)
++.=++.++. +.+.+.+.+.|+..|.+.+. .....|++-..+.|++....
T Consensus 98 rg~GiG~~Ll-~~~~~~a~~~g~~~i~l~v~-----------~~N~~a~~~Y~k~GF~~~~~ 147 (153)
T 1z4e_A 98 RGQGIGSQLV-CWAIERAKERGCHLIQLTTD-----------KQRPDALRFYEQLGFKASHE 147 (153)
T ss_dssp TTSSHHHHHH-HHHHHHHHHTTEEEEEEEEE-----------TTCTTHHHHHHHHTCEEEEE
T ss_pred cCCCHHHHHH-HHHHHHHHHcCCCEEEEEEc-----------cCChHHHHHHHHcCCceece
Confidence 3444555544 56788889999999998882 22345778778889987654
No 70
>1ytb_A Protein (tata binding protein (TBP)); protein-DNA complex, transcription/DNA complex; HET: DNA; 1.80A {Saccharomyces cerevisiae} SCOP: d.129.1.1 d.129.1.1 PDB: 1ngm_A* 1tba_B 1nh2_A* 1ytf_A* 1tbp_A 1qna_A* 1qn3_A* 1qn5_A* 1qn6_A* 1qn7_A* 1qn8_A* 1qn9_A* 1qn4_A* 1qnb_A* 1qnc_A* 1qne_A* 1vok_A 1vol_B* 1vto_A* 1vtl_E* ...
Probab=52.51 E-value=14 Score=26.22 Aligned_cols=36 Identities=22% Similarity=0.257 Sum_probs=31.3
Q ss_pred eeeeeccceeeccCCCCcHHHHHHHHHHHHHHHHHcCCc
Q 043606 3 LERITGGMKVKADRDESSPYAAMLAAQDVSQRCKERGIT 41 (101)
Q Consensus 3 ~~~SsG~~gfKg~r~k~t~~Aa~~a~~~~~~~~~~~gi~ 41 (101)
+.+++|-+...|++ +.-.+..|++++++.++++|++
T Consensus 54 lIF~SGKiv~TGak---s~e~~~~a~~~i~~~L~~lg~~ 89 (180)
T 1ytb_A 54 LIFASGKMVVTGAK---SEDDSKLASRKYARIIQKIGFA 89 (180)
T ss_dssp EECTTSEEEEEEES---SHHHHHHHHHHHHHHHHHHTCC
T ss_pred EEECCCeEEEEecC---CHHHHHHHHHHHHHHHHHcCCC
Confidence 56789999999998 7778899999999999999974
No 71
>3obe_A Sugar phosphate isomerase/epimerase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=52.49 E-value=48 Score=23.95 Aligned_cols=51 Identities=16% Similarity=0.137 Sum_probs=33.4
Q ss_pred HHHHHHHHHHcCCcEEEEEEeecCCCcccCCCC--------ChHHHHHHHHhCCCeEEEEE
Q 043606 28 AQDVSQRCKERGITALHIKLRATGGNKTKTPGP--------GAQSALRALARSGMKIGRIE 80 (101)
Q Consensus 28 ~~~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~--------gr~~~lr~l~~~gl~I~~I~ 80 (101)
.+.+++.+.++|+..|++....+... +-.+. -.+.+-+.|...||+|.++.
T Consensus 38 l~~~l~~aa~~G~~~VEl~~~~~~~~--~~~~~~p~~~~~~~~~~l~~~l~~~GL~i~~~~ 96 (305)
T 3obe_A 38 MPNGLNRLAKAGYTDLEIFGYREDTG--KFGDYNPKNTTFIASKDYKKMVDDAGLRISSSH 96 (305)
T ss_dssp HHHHHHHHHHHTCCEEEECCBCTTTC--CBCCC----CCCBCHHHHHHHHHHTTCEEEEEB
T ss_pred HHHHHHHHHHcCCCEEEecccccccc--cccCcCcccccccCHHHHHHHHHHCCCeEEEee
Confidence 35678899999999999986210000 00122 34455567788999999883
No 72
>3owc_A Probable acetyltransferase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; HET: COA; 1.90A {Pseudomonas aeruginosa}
Probab=52.31 E-value=40 Score=20.96 Aligned_cols=47 Identities=9% Similarity=0.090 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHHHHHH-cCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEEEEE
Q 043606 22 YAAMLAAQDVSQRCKE-RGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIE 80 (101)
Q Consensus 22 ~Aa~~a~~~~~~~~~~-~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~~I~ 80 (101)
++.. +.+.+.+.+.+ +|+..|.+.+. .....+++.+.+.|++.....
T Consensus 110 ig~~-ll~~~~~~a~~~~g~~~i~~~~~-----------~~N~~a~~~y~k~GF~~~~~~ 157 (188)
T 3owc_A 110 LGLP-MLEALLAEAFADADIERVELNVY-----------DWNAAARHLYRRAGFREEGLR 157 (188)
T ss_dssp CHHH-HHHHHHHHHHHSTTCCEEEEEEE-----------TTCHHHHHHHHHTTCEEEEEE
T ss_pred hhHH-HHHHHHHHHHHhhCceEEEEEEe-----------cCCHHHHHHHHHcCCEEeeeE
Confidence 4444 34567888888 69999999983 334678899999999887654
No 73
>1f75_A Undecaprenyl pyrophosphate synthetase; parallel beta sheet, NEW fold for isoprenoid synthase, peptidoglycan synthesis, transferase; 2.20A {Micrococcus luteus} SCOP: c.101.1.1
Probab=52.15 E-value=56 Score=24.18 Aligned_cols=63 Identities=16% Similarity=0.223 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHHHHcCCcEEEEEEeecCCCcccC-------CCCChHHH---HHHHHhCCCeEEEEEecCCCCC
Q 043606 24 AMLAAQDVSQRCKERGITALHIKLRATGGNKTKT-------PGPGAQSA---LRALARSGMKIGRIEDVTPIPT 87 (101)
Q Consensus 24 a~~a~~~~~~~~~~~gi~~v~V~lrg~~g~~~kG-------~G~gr~~~---lr~l~~~gl~I~~I~D~Tpiph 87 (101)
...+...+++-|.++||+.|.|+.--+ .||..- ++.-++.. +..|...++.|..|-|.+.+|.
T Consensus 49 G~~~l~~iv~~c~~~GI~~lTlYaFSt-eNwkRp~~EV~~Lm~l~~~~l~~~~~~l~~~~vr~~~iG~~~~lp~ 121 (249)
T 1f75_A 49 GMQTVRKITRYASDLGVKYLTLYAFST-ENWSRPKDEVNYLMKLPGDFLNTFLPELIEKNVKVETIGFIDDLPD 121 (249)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEEEC-------------CGGGTHHHHHHHHHHHHHHHTTCEEEEESCGGGSCH
T ss_pred HHHHHHHHHHHHHHcCCCEEEEEEecc-cccCCCHHHHHHHHHHHHHHHHHHHHHHHHcCeEEEEeCChhhCCH
Confidence 334556788889999999999998321 122110 01111111 2335668999999999988874
No 74
>3qxb_A Putative xylose isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 1.90A {Rhodospirillum rubrum}
Probab=51.86 E-value=35 Score=24.50 Aligned_cols=44 Identities=14% Similarity=0.170 Sum_probs=30.6
Q ss_pred HHHHHHHHHcCCcEEEEEEeecCCCcccCCCCC---------hHHHHHHHHhCCCeEEEEE
Q 043606 29 QDVSQRCKERGITALHIKLRATGGNKTKTPGPG---------AQSALRALARSGMKIGRIE 80 (101)
Q Consensus 29 ~~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~g---------r~~~lr~l~~~gl~I~~I~ 80 (101)
+.+.+.+.++|+..|++.+ ..+.+- .+..-+.|...||+|.++.
T Consensus 38 ~~~~~~a~~~G~~~vEl~~--------~~~~~~~~~~~~~~~~~~~~~~l~~~Gl~i~~~~ 90 (316)
T 3qxb_A 38 RLAGLVRDDLGLEYVQYTY--------DLTDPWWPDIERDRRAIAYAKAFRKAGLTIESTF 90 (316)
T ss_dssp HHHHHHHHTSCCCEEEEET--------TTSCTTSCHHHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHcCCCEEEeec--------cccCccccccchhhHHHHHHHHHHHcCCeEEEee
Confidence 4456778899999999987 333322 2334456778899998874
No 75
>1yk3_A Hypothetical protein RV1347C/MT1389; acyltransferase, GCN5-related fold, structural genomics, PSI, protein structure initiative; HET: BOG; 2.20A {Mycobacterium tuberculosis} SCOP: d.108.1.1
Probab=51.29 E-value=43 Score=22.56 Aligned_cols=49 Identities=8% Similarity=0.048 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHHHHHH--cCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEEEEEec
Q 043606 22 YAAMLAAQDVSQRCKE--RGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDV 82 (101)
Q Consensus 22 ~Aa~~a~~~~~~~~~~--~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~~I~D~ 82 (101)
|+.+ +.+.+.+.+.+ +|+..|.+.+ ......+++.+.+.|++.....+.
T Consensus 143 iG~~-ll~~~~~~a~~~~~g~~~I~l~v-----------~~~N~~A~~lyek~GF~~~g~~~~ 193 (210)
T 1yk3_A 143 FGPL-LLPRIVASVFANEPRCRRIMFDP-----------DHRNTATRRLCEWAGCKFLGEHDT 193 (210)
T ss_dssp HHHH-HHHHHHHHHHHHCTTCCEEEECC-----------BTTCHHHHHHHHHHTCEEEEEEEC
T ss_pred hHHH-HHHHHHHHHHhcCCCCCEEEEec-----------CccCHHHHHHHHHcCCEEeEEEeC
Confidence 4444 44567788875 8999999888 344568999999999988776554
No 76
>1s7k_A Acetyl transferase; GNAT; 1.80A {Salmonella typhimurium} SCOP: d.108.1.1 PDB: 1s7l_A* 1s7n_A* 1s7f_A 1z9u_A
Probab=50.36 E-value=42 Score=20.65 Aligned_cols=52 Identities=12% Similarity=0.053 Sum_probs=37.5
Q ss_pred CCcHHHHHHHHHHHHHHHHH-cCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEEEEEe
Q 043606 18 ESSPYAAMLAAQDVSQRCKE-RGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIED 81 (101)
Q Consensus 18 k~t~~Aa~~a~~~~~~~~~~-~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~~I~D 81 (101)
++.-++..+. +.+.+.+.+ .|+..|.+.+ -..-..+++.+.+.|+.......
T Consensus 108 rg~Gig~~ll-~~~~~~a~~~~~~~~i~~~~-----------~~~N~~a~~~y~k~Gf~~~~~~~ 160 (182)
T 1s7k_A 108 QGQGIMSQSL-QALMTHYARRGDIRRFVIKC-----------RVDNQASNAVARRNHFTLEGCMK 160 (182)
T ss_dssp CSSSHHHHHH-HHHHHHHHHHCSCCEEEEEE-----------ETTCHHHHHHHHHTTCEEEEEEE
T ss_pred cCCCHHHHHH-HHHHHHHHhhCCccEEEEEe-----------cCCCHHHHHHHHHCCCEEEeeee
Confidence 3444555544 557788876 8999999998 33355788999999998876544
No 77
>1ufh_A YYCN protein; alpha and beta, fold, acetyltransferase, structural genomics, PSI, protein structure initiative; 2.20A {Bacillus subtilis subsp} SCOP: d.108.1.1
Probab=50.06 E-value=36 Score=21.28 Aligned_cols=46 Identities=20% Similarity=0.275 Sum_probs=33.5
Q ss_pred cHHHHHHHHHHHHHHHHHcCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEE
Q 043606 20 SPYAAMLAAQDVSQRCKERGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIG 77 (101)
Q Consensus 20 t~~Aa~~a~~~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~ 77 (101)
.=++..+. +.+.+.+.++|+..|.+.+ -.....+++.+.+.|++..
T Consensus 127 ~Gig~~ll-~~~~~~~~~~g~~~i~l~~-----------~~~N~~a~~~y~k~GF~~~ 172 (180)
T 1ufh_A 127 KGYAKQAL-AALDQAARSMGIRKLSLHV-----------FAHNQTARKLYEQTGFQET 172 (180)
T ss_dssp SSHHHHHH-HHHHHHHHHTTCCEEEECC-----------CTTCHHHHHHHHHTTCCCC
T ss_pred CChHHHHH-HHHHHHHHHCCCCEEEEEe-----------ccCcHHHHHHHHHCCCEEe
Confidence 33555444 5677888899999988887 3445678898899998754
No 78
>1tiq_A Protease synthase and sporulation negative regulatory protein PAI 1; alpha-beta protein, structural genomics, PSI; HET: COA; 1.90A {Bacillus subtilis} SCOP: d.108.1.1
Probab=49.30 E-value=49 Score=21.14 Aligned_cols=49 Identities=10% Similarity=0.081 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHHHHHHHcCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEEEEEe
Q 043606 21 PYAAMLAAQDVSQRCKERGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIED 81 (101)
Q Consensus 21 ~~Aa~~a~~~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~~I~D 81 (101)
=++.++. +.+.+.+.+.|++.|.+.+ ......|++--++.|++......
T Consensus 106 GiG~~Ll-~~~~~~a~~~g~~~i~L~v-----------~~~N~~A~~fY~k~GF~~~g~~~ 154 (180)
T 1tiq_A 106 GLGKHLL-NKAIEIALERNKKNIWLGV-----------WEKNENAIAFYKKMGFVQTGAHS 154 (180)
T ss_dssp SHHHHHH-HHHHHHHHHTTCSEEEEEE-----------ETTCHHHHHHHHHTTCEEEEEEE
T ss_pred CHHHHHH-HHHHHHHHHCCCCEEEEEe-----------hhcCHHHHHHHHHcCCEEcCcEE
Confidence 3444444 5678888999999999988 23356788888999998876543
No 79
>2jvf_A De novo protein M7; tetrapeptide fragment-based protein design, artificial fold; NMR {Unidentified} SCOP: k.41.1.1
Probab=49.21 E-value=27 Score=22.07 Aligned_cols=27 Identities=7% Similarity=0.174 Sum_probs=21.4
Q ss_pred HHHHHHHHHHHHHHHcCCcEEEEEEee
Q 043606 23 AAMLAAQDVSQRCKERGITALHIKLRA 49 (101)
Q Consensus 23 Aa~~a~~~~~~~~~~~gi~~v~V~lrg 49 (101)
-|...-+.++..+..+||+.+.|++.|
T Consensus 61 qakelleliarllqklgykdinvrvng 87 (96)
T 2jvf_A 61 QAKELLELIARLLQKLGYKDINVRVNG 87 (96)
T ss_dssp HHHHHHHHHHHHHHHHTCSEEEEEEET
T ss_pred HHHHHHHHHHHHHHHhCCCceEEEEcC
Confidence 345556778888889999999999954
No 80
>1yre_A Hypothetical protein PA3270; APC5563, midwest center for structural genomics, MSC protein structure initiative, PSI, MCSG; HET: COA; 2.15A {Pseudomonas aeruginosa} SCOP: d.108.1.1
Probab=48.95 E-value=49 Score=21.04 Aligned_cols=52 Identities=10% Similarity=0.084 Sum_probs=37.3
Q ss_pred CCcHHHHHHHHHHHHHHHHH-cCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEEEEEe
Q 043606 18 ESSPYAAMLAAQDVSQRCKE-RGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIED 81 (101)
Q Consensus 18 k~t~~Aa~~a~~~~~~~~~~-~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~~I~D 81 (101)
++.=++..+. +.+.+.+.+ +|+..|.+.+. .....+++.+.+.|++......
T Consensus 109 rg~Gig~~ll-~~~~~~a~~~~g~~~i~~~v~-----------~~N~~a~~~y~k~GF~~~g~~~ 161 (197)
T 1yre_A 109 HGSGLNRMIK-YLMLKHAFDNLRMVRVQLSTA-----------ASNLRAQGAIDKLGAQREGVLR 161 (197)
T ss_dssp TTTTHHHHHH-HHHHHHHHHTSCCSEEEEEEE-----------TTCHHHHHHHHHHTCEEEEEEE
T ss_pred hcCCHHHHHH-HHHHHHHHhhcCccEEEEEEc-----------CCCHHHHHHHHHcCCeeeeeec
Confidence 3444655544 567888888 89999999982 3345788989999998765543
No 81
>3eik_A Tata-box-binding protein; DNA-binding, initiation factor, nucleus, transcription; 1.90A {Encephalitozoon cuniculi} PDB: 3oci_A 3oc3_C
Probab=48.71 E-value=18 Score=26.57 Aligned_cols=36 Identities=22% Similarity=0.268 Sum_probs=31.5
Q ss_pred eeeeeccceeeccCCCCcHHHHHHHHHHHHHHHHHcCCc
Q 043606 3 LERITGGMKVKADRDESSPYAAMLAAQDVSQRCKERGIT 41 (101)
Q Consensus 3 ~~~SsG~~gfKg~r~k~t~~Aa~~a~~~~~~~~~~~gi~ 41 (101)
+.+++|-+...|++ +.-.+..|++++++.++++|++
T Consensus 92 LIF~SGKiV~TGAk---S~e~a~~A~~ki~~~L~~lG~~ 127 (218)
T 3eik_A 92 LIFASGKMVITGAK---SEKSSRMAAQRYAKIIHKLGFN 127 (218)
T ss_dssp EECTTSEEEEEEES---SHHHHHHHHHHHHHHHHHTTCC
T ss_pred EEECCCeEEEEecC---CHHHHHHHHHHHHHHHHHcCCC
Confidence 56789999999999 7888999999999999999863
No 82
>1qsm_A HPA2 histone acetyltransferase; protein-acetyl coenzyme A complex; HET: ACO; 2.40A {Saccharomyces cerevisiae} SCOP: d.108.1.1 PDB: 1qso_A
Probab=48.66 E-value=29 Score=20.66 Aligned_cols=45 Identities=13% Similarity=0.033 Sum_probs=31.8
Q ss_pred cHHHHHHHHHHHHHHHHHcCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeE
Q 043606 20 SPYAAMLAAQDVSQRCKERGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKI 76 (101)
Q Consensus 20 t~~Aa~~a~~~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I 76 (101)
.-++.. +.+.+.+.+.+.|+..+.+.+. .....+++...+.|++-
T Consensus 98 ~Gig~~-ll~~~~~~~~~~g~~~i~l~~~-----------~~n~~a~~~y~k~Gf~~ 142 (152)
T 1qsm_A 98 KGAGGK-LIQFVYDEADKLGTPSVYWCTD-----------ESNHRAQLLYVKVGYKA 142 (152)
T ss_dssp SSHHHH-HHHHHHHHHHHTTCCCEEEEEE-----------TTCHHHHHHHHHHEEEC
T ss_pred CCHHHH-HHHHHHHHHHHcCCCeEEEEee-----------CCCHHHHHHHHHcCCCc
Confidence 334544 4456788888999999999882 33456788888888763
No 83
>1ghe_A Acetyltransferase; acyl coenzyme A complex; HET: ACO; 1.55A {Pseudomonas syringae PV} SCOP: d.108.1.1 PDB: 1j4j_A*
Probab=48.14 E-value=45 Score=20.34 Aligned_cols=50 Identities=12% Similarity=-0.022 Sum_probs=35.8
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEEEEEe
Q 043606 19 SSPYAAMLAAQDVSQRCKERGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIED 81 (101)
Q Consensus 19 ~t~~Aa~~a~~~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~~I~D 81 (101)
+.-++..+. +.+.+.+.+.|+..+.+.+. -.+ . +++.+.+.|+.......
T Consensus 104 g~Gig~~ll-~~~~~~~~~~g~~~i~l~~~----------~~n-~-a~~~y~k~Gf~~~~~~~ 153 (177)
T 1ghe_A 104 GRGLGRQLM-DEVEQVAVKHKRGLLHLDTE----------AGS-V-AEAFYSALAYTRVGELP 153 (177)
T ss_dssp TSSHHHHHH-HHHHHHHHHTTCCEEEEEEE----------TTS-H-HHHHHHHTTCEEEEEEE
T ss_pred CCCHHHHHH-HHHHHHHHHcCCCEEEEEec----------cCC-H-HHHHHHHcCCEEccccc
Confidence 344555544 56788899999999999983 112 3 88989999998876543
No 84
>3juw_A Probable GNAT-family acetyltransferase; structural genomics, APC60242, acetyltransferas protein structure initiative; HET: MSE; 2.11A {Bordetella pertussis}
Probab=48.05 E-value=46 Score=20.50 Aligned_cols=52 Identities=15% Similarity=0.063 Sum_probs=38.0
Q ss_pred CcHHHHHHHHHHHHHHHHH-cCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEEEEEec
Q 043606 19 SSPYAAMLAAQDVSQRCKE-RGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDV 82 (101)
Q Consensus 19 ~t~~Aa~~a~~~~~~~~~~-~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~~I~D~ 82 (101)
+.=++..+. +.+.+.+.+ +|+..|.+.+ -..-..+++.+.+.|+......+.
T Consensus 111 g~Gig~~ll-~~~~~~a~~~~g~~~i~l~v-----------~~~N~~a~~~y~k~GF~~~~~~~~ 163 (175)
T 3juw_A 111 GRGLAAEAM-QALLAHHDRSSGRQRVVALI-----------ARSNLPSLRLAERLGFRGYSDVAF 163 (175)
T ss_dssp TSSHHHHHH-HHHHHHHHHHHTSCCEEEEE-----------ETTCHHHHHHHHHTTCEEEEEEEE
T ss_pred CCCHHHHHH-HHHHHHHHhCCCCceEEEEE-----------CCCChhHHHHHHHcCCeEecceee
Confidence 344555544 567777877 5999999998 334567999999999998877654
No 85
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=47.50 E-value=31 Score=23.74 Aligned_cols=49 Identities=8% Similarity=0.093 Sum_probs=31.0
Q ss_pred HHHHHHHHHcCCcEEEEE-EeecCCCcccCCCCChHHHHHHHHhCCCeEEEEE
Q 043606 29 QDVSQRCKERGITALHIK-LRATGGNKTKTPGPGAQSALRALARSGMKIGRIE 80 (101)
Q Consensus 29 ~~~~~~~~~~gi~~v~V~-lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~~I~ 80 (101)
+.+++.+.++|+..|++. ..... .+. -....+...+.|...||+|.++.
T Consensus 17 ~~~l~~~~~~G~~~vEl~~~~~~~-~~~--~~~~~~~~~~~l~~~gl~~~~~~ 66 (278)
T 1i60_A 17 KLDLELCEKHGYDYIEIRTMDKLP-EYL--KDHSLDDLAEYFQTHHIKPLALN 66 (278)
T ss_dssp HHHHHHHHHTTCSEEEEETTTHHH-HHT--TSSCHHHHHHHHHTSSCEEEEEE
T ss_pred HHHHHHHHHhCCCEEEEccHHHHH-HHh--ccCCHHHHHHHHHHcCCCeeeec
Confidence 456778888999999998 62100 000 02334456667778899998774
No 86
>2fsr_A Acetyltransferase; alpha-beta-sandwich, structural genomics, PSI, protein struc initiative, midwest center for structural genomics; HET: PEG; 1.52A {Agrobacterium tumefaciens str} SCOP: d.108.1.1
Probab=46.89 E-value=57 Score=21.19 Aligned_cols=49 Identities=20% Similarity=0.207 Sum_probs=35.6
Q ss_pred CCcHHHHHHHHHHHHHHHHH-cCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEEE
Q 043606 18 ESSPYAAMLAAQDVSQRCKE-RGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGR 78 (101)
Q Consensus 18 k~t~~Aa~~a~~~~~~~~~~-~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~~ 78 (101)
++.-|+.++. +.+.+.+.+ +|+..|.+.+ -.....+++.+.+.|+....
T Consensus 124 rg~Gig~~ll-~~~~~~a~~~~g~~~i~l~v-----------~~~N~~a~~~y~k~GF~~~g 173 (195)
T 2fsr_A 124 EGRGYAAEAA-VALRDWAFETLNLPTLVSYV-----------SPQNRKSAAVAERIGGTLDP 173 (195)
T ss_dssp TTSSHHHHHH-HHHHHHHHHHSCCSCEEEEE-----------CTTCHHHHHHHHHTTCEECT
T ss_pred cCCChHHHHH-HHHHHHHHhhCCccEEEEEE-----------CCCCHHHHHHHHHCCCEEEe
Confidence 3444555544 567788877 7999999998 34456788999999987654
No 87
>2bue_A AAC(6')-IB; GNAT, transferase, aminoglycoside, fluoroquinolone, acetyltransferase, antibiotic resistance; HET: COA RIO; 1.7A {Escherichia coli} PDB: 1v0c_A* 2vqy_A* 2prb_A* 2qir_A* 2pr8_A*
Probab=46.63 E-value=52 Score=20.71 Aligned_cols=52 Identities=10% Similarity=0.151 Sum_probs=37.0
Q ss_pred CcHHHHHHHHHHHHHHHHH-cCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEEEEEec
Q 043606 19 SSPYAAMLAAQDVSQRCKE-RGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDV 82 (101)
Q Consensus 19 ~t~~Aa~~a~~~~~~~~~~-~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~~I~D~ 82 (101)
+.=++.. +.+.+.+.+.+ +|+..|.+.+ -.....+++.+.+.|+........
T Consensus 128 g~Gig~~-ll~~~~~~a~~~~g~~~i~~~v-----------~~~N~~a~~~y~k~GF~~~~~~~~ 180 (202)
T 2bue_A 128 GKGLGTK-LVRALVELLFNDPEVTKIQTDP-----------SPSNLRAIRCYEKAGFERQGTVTT 180 (202)
T ss_dssp TSSHHHH-HHHHHHHHHHTSTTCCEEEECC-----------CTTCHHHHHHHHHTTCEEEEEEEE
T ss_pred cCChHHH-HHHHHHHHHHhCCCCcEEEeCc-----------ccCCHHHHHHHHHcCCEEeeeecC
Confidence 3335544 34567788887 6999988887 444567889999999988766543
No 88
>2zvr_A Uncharacterized protein TM_0416; hyperthermophIle, ketohexose 3-epimeras tagatose 3-epimerase, isomerase; 2.20A {Thermotoga maritima}
Probab=46.52 E-value=31 Score=24.35 Aligned_cols=46 Identities=15% Similarity=0.056 Sum_probs=33.6
Q ss_pred HHHHHHHHHHcCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEEEEE
Q 043606 28 AQDVSQRCKERGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIE 80 (101)
Q Consensus 28 ~~~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~~I~ 80 (101)
.+.+++.+.++|+..|++.... ......+.+.+.|...||+|.++.
T Consensus 43 ~~~~l~~~~~~G~~~vEl~~~~-------~~~~~~~~~~~~l~~~gl~~~~~~ 88 (290)
T 2zvr_A 43 LRKGMELAKRVGYQAVEIAVRD-------PSIVDWNEVKILSEELNLPICAIG 88 (290)
T ss_dssp HHHHHHHHHHHTCSEEEEECSC-------GGGSCHHHHHHHHHHHTCCEEEEE
T ss_pred HHHHHHHHHHhCCCEEEEcCCC-------cchhhHHHHHHHHHHcCCeEEEEe
Confidence 3567888999999999998721 112345556677888899998875
No 89
>3fbu_A Acetyltransferase, GNAT family; structur genomics, PSI2, MCSG, protein structure initiative, midwest for structural genomics; HET: COA; 1.80A {Bacillus anthracis str}
Probab=46.26 E-value=49 Score=20.23 Aligned_cols=50 Identities=18% Similarity=0.197 Sum_probs=36.1
Q ss_pred CcHHHHHHHHHHHHHHHHHc-CCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEEEEE
Q 043606 19 SSPYAAMLAAQDVSQRCKER-GITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIE 80 (101)
Q Consensus 19 ~t~~Aa~~a~~~~~~~~~~~-gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~~I~ 80 (101)
+.=++.. +.+.+.+.+.+. |+..|.+.+ ...-..+++.+.+.|++.....
T Consensus 96 g~Gig~~-ll~~~~~~a~~~~~~~~i~l~v-----------~~~N~~a~~~y~k~GF~~~g~~ 146 (168)
T 3fbu_A 96 NKGYASE-AAQATLKYGFKEMKLHRIIATC-----------QPENTPSYRVMEKIGMRREGYF 146 (168)
T ss_dssp TSSHHHH-HHHHHHHHHHHTSCCSEEEEEE-----------CTTCHHHHHHHHHTTCEEEEEE
T ss_pred cCCHHHH-HHHHHHHHHHhhCCceEEEEEe-----------ccCChHHHHHHHHCCCeEEEEe
Confidence 3345544 345677788665 999999999 4445688999999999877554
No 90
>1vp8_A Hypothetical protein AF0103; putative pyruvate kinase, structural genomics, joint center structural genomics, JCSG; HET: MSE FMN; 1.30A {Archaeoglobus fulgidus} SCOP: c.49.1.2
Probab=46.26 E-value=37 Score=24.83 Aligned_cols=47 Identities=26% Similarity=0.309 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHHcCCcEEEEEEeecCCCcccCCCCChHHHHHHHHh-CCCeEEEEEecCC
Q 043606 26 LAAQDVSQRCKERGITALHIKLRATGGNKTKTPGPGAQSALRALAR-SGMKIGRIEDVTP 84 (101)
Q Consensus 26 ~a~~~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~-~gl~I~~I~D~Tp 84 (101)
.+.+.+.++++++||+.|.|-= .-|. +|.+++.. .|++|+.|+....
T Consensus 30 ~tl~la~era~e~~Ik~iVVAS---------~sG~---TA~k~~e~~~~i~lVvVTh~~G 77 (201)
T 1vp8_A 30 ETLRLAVERAKELGIKHLVVAS---------SYGD---TAMKALEMAEGLEVVVVTYHTG 77 (201)
T ss_dssp HHHHHHHHHHHHHTCCEEEEEC---------SSSH---HHHHHHHHCTTCEEEEEECCTT
T ss_pred HHHHHHHHHHHHcCCCEEEEEe---------CCCh---HHHHHHHHhcCCeEEEEeCcCC
Confidence 3445567899999999776653 2243 45555543 5788888875443
No 91
>3h4q_A Putative acetyltransferase; NP_371943.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE P33; 2.50A {Staphylococcus aureus subsp}
Probab=46.12 E-value=20 Score=22.81 Aligned_cols=50 Identities=16% Similarity=0.023 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHHHHHHcCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEEEEEecC
Q 043606 22 YAAMLAAQDVSQRCKERGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVT 83 (101)
Q Consensus 22 ~Aa~~a~~~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~~I~D~T 83 (101)
++.+ +.+.+.+.+.+.|++.|.+.+. .....+++...+.|++........
T Consensus 120 ig~~-Ll~~~~~~a~~~g~~~i~l~v~-----------~~N~~a~~~y~k~GF~~~~~~~~~ 169 (188)
T 3h4q_A 120 AATE-LFNYVIDVVKARGAEVILTDTF-----------ALNKPAQGLFAKFGFHKVGEQLME 169 (188)
T ss_dssp HHHH-HHHHHHHHHHHTTCCEEEEEGG-----------GSCGGGTHHHHHTTCEEC------
T ss_pred HHHH-HHHHHHHHHHHcCCCEEEEEEe-----------cCCHHHHHHHHHCCCeEeceEEec
Confidence 4444 4466888899999999998872 223467888899999887765543
No 92
>4ava_A Lysine acetyltransferase; allosteric regulation, domain coupling; HET: ACO; 1.70A {Mycobacterium tuberculosis} PDB: 4avb_A* 4avc_A*
Probab=46.04 E-value=50 Score=23.61 Aligned_cols=48 Identities=10% Similarity=0.126 Sum_probs=36.1
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEEE
Q 043606 19 SSPYAAMLAAQDVSQRCKERGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGR 78 (101)
Q Consensus 19 ~t~~Aa~~a~~~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~~ 78 (101)
+.=|+.. +.+.+.+.+.++|+..|.+.+ -.....+++...+.|+++..
T Consensus 246 g~Gig~~-ll~~~~~~a~~~g~~~i~l~v-----------~~~N~~a~~~y~k~GF~~~~ 293 (333)
T 4ava_A 246 GRGIGSF-LIGALSVAARVDGVERFAARM-----------LSDNVPMRTIMDRYGAVWQR 293 (333)
T ss_dssp TSSHHHH-HHHHHHHHHHHTTCCEEEEEE-----------ETTCHHHHHHHHTTTCCCEE
T ss_pred CCCHHHH-HHHHHHHHHHHCCCcEEEEEE-----------CCCCHHHHHHHHHcCCceec
Confidence 3345544 446688888999999999998 34456889999999998763
No 93
>2dxq_A AGR_C_4057P, acetyltransferase; structural genomics, PSI-2, protein struc initiative, midwest center for structural genomics, MCSG; 1.80A {Agrobacterium tumefaciens str}
Probab=46.00 E-value=50 Score=20.33 Aligned_cols=44 Identities=7% Similarity=0.064 Sum_probs=33.4
Q ss_pred cHHHHHHHHHHHHHHHHHcCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCe
Q 043606 20 SPYAAMLAAQDVSQRCKERGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMK 75 (101)
Q Consensus 20 t~~Aa~~a~~~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~ 75 (101)
.=++..+. +.+.+.+.++|+..|.+.+ ......|++--.+.|++
T Consensus 96 ~GiG~~Ll-~~~~~~a~~~g~~~i~l~v-----------~~~N~~A~~fY~k~GF~ 139 (150)
T 2dxq_A 96 RGYGRTVV-RHAIETAFGANCYKVMLLT-----------GRHDPAVHAFYESCGFV 139 (150)
T ss_dssp SSHHHHHH-HHHHHHHHHTTCSEEEEEE-----------CCCCHHHHHHHHHTTCE
T ss_pred CCHHHHHH-HHHHHHHHHCCCCEEEEEe-----------CCCChHHHHHHHHcCCc
Confidence 33444444 5678889999999999988 44456788888899998
No 94
>4h89_A GCN5-related N-acetyltransferase; N-acyltransferase superfamily, structural genomics, PSI-BIOL midwest center for structural genomics, MCSG; 1.37A {Kribbella flavida}
Probab=45.85 E-value=56 Score=20.78 Aligned_cols=47 Identities=13% Similarity=0.142 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHHHHHHHcCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEEE
Q 043606 21 PYAAMLAAQDVSQRCKERGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGR 78 (101)
Q Consensus 21 ~~Aa~~a~~~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~~ 78 (101)
=++.+ +.+.+.+.|.+.|+..+.+..- -.....|++..++.|++..-
T Consensus 104 GiG~~-Ll~~~~~~a~~~g~~~~~l~~~----------~~~N~~A~~~y~k~GF~~~G 150 (173)
T 4h89_A 104 GVGRA-LCQDMIDWAGREGFRAIQFNAV----------VETNTVAVKLWQSLGFRVIG 150 (173)
T ss_dssp SHHHH-HHHHHHHHHHHTTCSEEEEEEE----------ETTCHHHHHHHHHTTCEEEE
T ss_pred hHHHH-HHHHHHHHHHHCCCcEEEEeee----------cccCHHHHHHHHHCCCEEEE
Confidence 34444 4456788999999999887531 11246788989999998763
No 95
>2d2r_A Undecaprenyl pyrophosphate synthase; prenyltransferase, transferase; 1.88A {Helicobacter pylori} PDB: 2dtn_A
Probab=45.73 E-value=60 Score=23.99 Aligned_cols=62 Identities=13% Similarity=0.230 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHHHHcCCcEEEEEEeecCCCcccCCCCChHHH-----------HHHHHhCCCeEEEEEecCCCCC
Q 043606 24 AMLAAQDVSQRCKERGITALHIKLRATGGNKTKTPGPGAQSA-----------LRALARSGMKIGRIEDVTPIPT 87 (101)
Q Consensus 24 a~~a~~~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~gr~~~-----------lr~l~~~gl~I~~I~D~Tpiph 87 (101)
...+...+++-|.++||+.|.|+.--+ .||.. +-.=-+.. +..|...++.|..|-|...+|.
T Consensus 44 G~~~l~~iv~~c~~~GI~~lTlYaFSt-eNwkR-p~~EV~~Lm~l~~~~l~~~~~~l~~~~vrl~~iG~~~~lp~ 116 (245)
T 2d2r_A 44 GVKTLKDITIWCANHKLECLTLYAFST-ENWKR-PKSEVDFLMKMLKKYLKDERSTYLDNNIRFRAIGDLEGFSK 116 (245)
T ss_dssp HHHHHHHHHHHHHTTTCSEEEEECC------------CHHHHHHHHHHHHHHHHHHHHHTTCEEEEESCGGGSCH
T ss_pred HHHHHHHHHHHHHHcCCCEEEEEeccC-cccCC-CHHHHHHHHHHHHHHHHHHHHHHHHcCeEEEEecChhhCCH
Confidence 344556788889999999999998321 11111 00000111 2234557999999999988874
No 96
>3qas_B Undecaprenyl pyrophosphate synthase; alpha-helix, isoprenoid biosynthesis, transferase; 1.70A {Escherichia coli} PDB: 1jp3_A* 1v7u_A* 1x06_A* 1x07_A* 2e98_A* 2e99_A* 2e9a_A* 2e9c_A* 2e9d_A* 1ueh_A 1x09_A* 1x08_A*
Probab=45.63 E-value=63 Score=24.00 Aligned_cols=63 Identities=14% Similarity=0.167 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHHHHcCCcEEEEEEeecCCCcccC-------CCCChHH---HHHHHHhCCCeEEEEEecCCCCC
Q 043606 24 AMLAAQDVSQRCKERGITALHIKLRATGGNKTKT-------PGPGAQS---ALRALARSGMKIGRIEDVTPIPT 87 (101)
Q Consensus 24 a~~a~~~~~~~~~~~gi~~v~V~lrg~~g~~~kG-------~G~gr~~---~lr~l~~~gl~I~~I~D~Tpiph 87 (101)
...+...+++-|.++||+.|.|+..-+ -||..- ++.-++. -+..|...++.|..|-|.+.+|.
T Consensus 46 G~~~l~~iv~~c~~~GI~~lTlYaFSt-ENwkRp~~EV~~Lm~l~~~~l~~~~~~l~~~~vrlr~iG~~~~lp~ 118 (253)
T 3qas_B 46 GAKSVRRAVSFAANNGIEALTLYAFSS-ENWNRPAQEVSALMELFVWALDSEVKSLHRHNVRLRIIGDTSRFNS 118 (253)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECCCC------------------CTHHHHHHHHHHHTTCEEEEESCCTTSCH
T ss_pred HHHHHHHHHHHHHHCCCCEEEEEEecC-cccCCCHHHHHHHHHHHHHHHHHHHHHHHHCCeEEEEeCChHhCCH
Confidence 344556788899999999999998321 111110 0111111 13346667999999999988873
No 97
>2vg3_A Undecaprenyl pyrophosphate synthetase; transferase, cell WALL biogenesis/degradation, cell cycle, P transferase; HET: GPP; 1.8A {Mycobacterium tuberculosis} PDB: 2vg2_A* 2vg4_A
Probab=45.32 E-value=47 Score=25.20 Aligned_cols=59 Identities=17% Similarity=0.141 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHHHHcCCcEEEEEEeecCCCcccCCCCChH---HH-----------HHHHHhCCCeEEEEEecCCCCC
Q 043606 24 AMLAAQDVSQRCKERGITALHIKLRATGGNKTKTPGPGAQ---SA-----------LRALARSGMKIGRIEDVTPIPT 87 (101)
Q Consensus 24 a~~a~~~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~gr~---~~-----------lr~l~~~gl~I~~I~D~Tpiph 87 (101)
...+...+++-|.++||+.|.|+.--+ .||.. -.+ .. +..|...++.|..|-|...+|-
T Consensus 84 G~~~l~~iv~~c~~lGI~~LTlYaFSt-ENwkR----p~~EV~~Lm~L~~~~l~~~~~~l~~~~vrvrviG~~~~lp~ 156 (284)
T 2vg3_A 84 GEAVVIDIACGAIELGIKWLSLYAFST-ENWKR----SPEEVRFLMGFNRDVVRRRRDTLKKLGVRIRWVGSRPRLWR 156 (284)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEEEEET-TGGGS----CHHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEESCCTTSCH
T ss_pred HHHHHHHHHHHHHHcCCCEEEEEeccC-cccCC----CHHHHHHHHHHHHHHHHHHHHHHHHcCeEEEEeCChhhCCH
Confidence 334556788889999999999998432 22211 111 11 2224557899999999887763
No 98
>1yvk_A Hypothetical protein BSU33890; ALPHS-beta protein, structural genomics, PSI, protein structure initiative; HET: COA; 3.01A {Bacillus subtilis subsp} SCOP: d.108.1.1
Probab=45.10 E-value=56 Score=20.65 Aligned_cols=50 Identities=20% Similarity=0.379 Sum_probs=36.5
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEEEEE
Q 043606 19 SSPYAAMLAAQDVSQRCKERGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIE 80 (101)
Q Consensus 19 ~t~~Aa~~a~~~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~~I~ 80 (101)
+.-++.++. +.+.+.+.+.|+..+.+.+ ......+++...+.|+++....
T Consensus 77 g~Gig~~Ll-~~~~~~~~~~g~~~i~l~~-----------~~~n~~a~~~y~k~GF~~~~~~ 126 (163)
T 1yvk_A 77 KKGFGKQLV-LDAIEKAKKLGADTIEIGT-----------GNSSIHQLSLYQKCGFRIQAID 126 (163)
T ss_dssp TSSHHHHHH-HHHHHHHHHTTCSEEEEEE-----------ETTCHHHHHHHHHTTCEEEEEE
T ss_pred CCCHHHHHH-HHHHHHHHHCCCCEEEEEc-----------CCCCHHHHHHHHHCCCEEecee
Confidence 334555544 5678888999999999888 2234568888899999988754
No 99
>1nsl_A Probable acetyltransferase; structural genomics, hexamer, alpha-beta, PSI, protein struc initiative, midwest center for structural genomics; 2.70A {Bacillus subtilis} SCOP: d.108.1.1
Probab=44.97 E-value=53 Score=20.27 Aligned_cols=51 Identities=10% Similarity=0.053 Sum_probs=36.0
Q ss_pred CcHHHHHHHHHHHHHHH-HHcCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEEEEEe
Q 043606 19 SSPYAAMLAAQDVSQRC-KERGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIED 81 (101)
Q Consensus 19 ~t~~Aa~~a~~~~~~~~-~~~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~~I~D 81 (101)
+.=++..+. +.+.+.+ .++|+..|.+.+ -..-..+++.+.+.|+.......
T Consensus 107 g~Gig~~ll-~~~~~~a~~~~g~~~i~~~~-----------~~~N~~a~~~y~k~Gf~~~~~~~ 158 (184)
T 1nsl_A 107 GKGIITAAC-RKLITYAFEELELNRVAICA-----------AVGNEKSRAVPERIGFLEEGKAR 158 (184)
T ss_dssp TSSHHHHHH-HHHHHHHHHTSCCSEEEEEE-----------ETTCHHHHHHHHHHTCEEEEEEE
T ss_pred CCCHHHHHH-HHHHHHHHHhcCcEEEEEEE-----------ecCCHHHHHHHHHcCCEEEEEee
Confidence 344555544 4577778 468999999998 33355788989999998776543
No 100
>2fck_A Ribosomal-protein-serine acetyltransferase, putat; ribosomal-protein structural genomics, PSI, protein structure initiative; HET: MSE; 1.70A {Vibrio cholerae o1 biovar eltor} SCOP: d.108.1.1
Probab=43.94 E-value=55 Score=20.14 Aligned_cols=47 Identities=21% Similarity=0.244 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHHHHHH-cCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEEEEE
Q 043606 22 YAAMLAAQDVSQRCKE-RGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIE 80 (101)
Q Consensus 22 ~Aa~~a~~~~~~~~~~-~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~~I~ 80 (101)
++.. +.+.+.+.+.+ +|+..|.+.+ -..-..+++.+.+.|+......
T Consensus 114 ig~~-ll~~~~~~a~~~~g~~~i~~~~-----------~~~N~~a~~~y~k~GF~~~~~~ 161 (181)
T 2fck_A 114 YGKE-ALTALILFCFERLELTRLEIVC-----------DPENVPSQALALRCGANREQLA 161 (181)
T ss_dssp HHHH-HHHHHHHHHHHTSCCSEEEEEE-----------CTTCHHHHHHHHHTTCEEEEEE
T ss_pred hHHH-HHHHHHHHHHHhcCceEEEEEE-----------ccCCHHHHHHHHHcCCEEEEEE
Confidence 4444 44567788887 5999999998 3445678899999999887553
No 101
>2zds_A Putative DNA-binding protein; TIM-barrel fold, structural genomics, NPPSFA; 2.30A {Streptomyces coelicolor}
Probab=43.90 E-value=69 Score=22.80 Aligned_cols=46 Identities=17% Similarity=0.197 Sum_probs=31.4
Q ss_pred HHHHHHHHHcCCcEEEEEEeecCCCcccCCCC--------ChHHHHHHHHhCCCeEEEEE
Q 043606 29 QDVSQRCKERGITALHIKLRATGGNKTKTPGP--------GAQSALRALARSGMKIGRIE 80 (101)
Q Consensus 29 ~~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~--------gr~~~lr~l~~~gl~I~~I~ 80 (101)
+.+++.+.++|+..|++...+ ..+.+ ..+...+.|...||+|.+|.
T Consensus 18 ~~~l~~~~~~G~~~vEl~~~~------~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~ 71 (340)
T 2zds_A 18 EEVCRLARDFGYDGLELACWG------DHFEVDKALADPSYVDSRHQLLDKYGLKCWAIS 71 (340)
T ss_dssp HHHHHHHHHHTCSEEEEESST------TTCCHHHHHHCTTHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHcCCCEEEecccc------ccCCccccccCHHHHHHHHHHHHHcCCeEEEee
Confidence 456788899999999998621 11221 12345566788999998874
No 102
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=43.74 E-value=42 Score=23.40 Aligned_cols=43 Identities=12% Similarity=0.071 Sum_probs=33.0
Q ss_pred HHHHHHHHHcCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEEEEE
Q 043606 29 QDVSQRCKERGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIE 80 (101)
Q Consensus 29 ~~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~~I~ 80 (101)
+.+++.+.++|+..|++... .+...+.+-+.|...||+|..+.
T Consensus 26 ~~~l~~~~~~G~~~vEl~~~---------~~~~~~~~~~~l~~~gl~~~~~~ 68 (269)
T 3ngf_A 26 LERFRLAAEAGFGGVEFLFP---------YDFDADVIARELKQHNLTQVLFN 68 (269)
T ss_dssp HHHHHHHHHTTCSEEECSCC---------TTSCHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHcCCCEEEecCC---------ccCCHHHHHHHHHHcCCcEEEEe
Confidence 45788899999999998761 13345666677888999999885
No 103
>3r9f_A MCCE protein; microcin C7, acetyltransferase, SELF immunity, resistance, A coenzyme A, transferase; HET: COA GSU; 1.20A {Escherichia coli} PDB: 3r95_A* 3r96_A* 3r9e_A* 3r9g_A*
Probab=43.68 E-value=58 Score=20.41 Aligned_cols=51 Identities=14% Similarity=0.104 Sum_probs=36.0
Q ss_pred CCcHHHHHHHHHHHHHHHHH-cCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEEEEE
Q 043606 18 ESSPYAAMLAAQDVSQRCKE-RGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIE 80 (101)
Q Consensus 18 k~t~~Aa~~a~~~~~~~~~~-~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~~I~ 80 (101)
++.=++.. +.+.+.+.+.+ +|++.|.+.+ -..-..+++.+.+.|++...+.
T Consensus 116 ~g~Gig~~-ll~~~~~~a~~~~~~~~i~~~v-----------~~~N~~a~~~y~k~GF~~~g~~ 167 (188)
T 3r9f_A 116 QGKGIVTN-AINKLIQEYGDSGVIKRFVIKC-----------IVDNKKSNATALRCGFTLEGVL 167 (188)
T ss_dssp TTSSHHHH-HHHHHHHHHHTTTSCSEEEEEE-----------ETTCHHHHHHHHHTTCEEEEEE
T ss_pred cCCCHHHH-HHHHHHHHHHHhcCeEEEEEEe-----------cCCCHHHHHHHHHCCCeEEeEe
Confidence 33445554 44567777765 4999999999 3345678999999999876543
No 104
>1y9k_A IAA acetyltransferase; structural genomics, midwest center for structural genomics bacillus cereus ATCC 14579, PSI; 2.39A {Bacillus cereus atcc 14579} SCOP: d.108.1.1
Probab=42.68 E-value=57 Score=19.98 Aligned_cols=50 Identities=18% Similarity=0.234 Sum_probs=35.9
Q ss_pred cHHHHHHHHHHHHHHHHHcCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEEEEEe
Q 043606 20 SPYAAMLAAQDVSQRCKERGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIED 81 (101)
Q Consensus 20 t~~Aa~~a~~~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~~I~D 81 (101)
.-++..+. +.+.+.+.+.|+..|.+... .....+++.+.+.|+.......
T Consensus 76 ~Gig~~ll-~~~~~~~~~~g~~~i~~~~~-----------~~n~~a~~~y~k~Gf~~~~~~~ 125 (157)
T 1y9k_A 76 KGIGKKLL-RHAVETAKGYGMSKLEVGTG-----------NSSVSQLALYQKCGFRIFSIDF 125 (157)
T ss_dssp SSHHHHHH-HHHHHHHHHTTCSEEEEEEE-----------TTCHHHHHHHHHTTCEEEEEET
T ss_pred CCHHHHHH-HHHHHHHHHCCCCEEEEEeC-----------CCCHHHHHHHHHCCCEEecccc
Confidence 33555444 56778888999999998882 2345688888999999876543
No 105
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=42.14 E-value=31 Score=27.65 Aligned_cols=61 Identities=13% Similarity=0.223 Sum_probs=41.2
Q ss_pred CCcHHHHHHHHHHHHHHHHHcCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEEEEEecCCCCC
Q 043606 18 ESSPYAAMLAAQDVSQRCKERGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPIPT 87 (101)
Q Consensus 18 k~t~~Aa~~a~~~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~~I~D~Tpiph 87 (101)
..|-|....+++.+++.. ...++...|.| .|+|-=-..+.+.|.+.|.+|+.|.|.+-.-|
T Consensus 212 ~aTg~Gv~~~~~~~~~~~-g~~l~g~~vaV--------qGfGnVG~~~a~~L~e~GakvVavsD~~G~i~ 272 (440)
T 3aog_A 212 DATGRGVFITAAAAAEKI-GLQVEGARVAI--------QGFGNVGNAAARAFHDHGARVVAVQDHTGTVY 272 (440)
T ss_dssp THHHHHHHHHHHHHHHHH-TCCSTTCEEEE--------ECCSHHHHHHHHHHHHTTCEEEEEECSSCEEE
T ss_pred cchHHHHHHHHHHHHHhc-CCCccCCEEEE--------eccCHHHHHHHHHHHHCCCEEEEEEcCCcEEE
Confidence 456666666666555442 23455678888 67885333455778889999999999875444
No 106
>4h8e_A Undecaprenyl pyrophosphate synthase; alpha-helix, prenyl transferase, cell WALL biosynthesis, FAR diphosphate binding; HET: FPP; 1.30A {Staphylococcus aureus subsp}
Probab=42.07 E-value=1.1e+02 Score=22.92 Aligned_cols=60 Identities=15% Similarity=0.211 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHHHHHcCCcEEEEEEeecCCCcccCCCCC-hHH-------------HHHHHHhCCCeEEEEEecCCCCC
Q 043606 23 AAMLAAQDVSQRCKERGITALHIKLRATGGNKTKTPGPG-AQS-------------ALRALARSGMKIGRIEDVTPIPT 87 (101)
Q Consensus 23 Aa~~a~~~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~g-r~~-------------~lr~l~~~gl~I~~I~D~Tpiph 87 (101)
+...+...+++.|.++||+.|.|+.--+ ..+..- .|. .+..|...|+.|..|-|.+.+|.
T Consensus 52 ~G~~~~~~iv~~c~~lGI~~lTlYaFSt-----ENwkRp~~EV~~Lm~L~~~~l~~~~~~l~~~~vrvr~iGd~~~Lp~ 125 (256)
T 4h8e_A 52 EGMQTIKKITRIASDIGVKYLTLYAFST-----ENWSRPESEVNYIMNLPVNFLKTFLPELIEKNVKVETIGFTDKLPK 125 (256)
T ss_dssp HHHHHHHHHHHHHHHHTCSEEEEEEEET-----TGGGSCHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEESCGGGSCH
T ss_pred HHHHHHHHHHHHHHHcCCCEEEEEEEch-----hhhCCCHHHHHHHHHHHHHHHHHHHHHHHHcCeEEEEecCcccCCH
Confidence 3444556788889999999999998643 222211 111 12334567999999999998874
No 107
>2qml_A BH2621 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, unknown function; HET: MSE; 1.55A {Bacillus halodurans}
Probab=41.53 E-value=67 Score=20.45 Aligned_cols=52 Identities=4% Similarity=0.019 Sum_probs=36.7
Q ss_pred CcHHHHHHHHHHHHHHHHH-cCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEEEEEec
Q 043606 19 SSPYAAMLAAQDVSQRCKE-RGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDV 82 (101)
Q Consensus 19 ~t~~Aa~~a~~~~~~~~~~-~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~~I~D~ 82 (101)
+.-++.+ +.+.+.+.+.+ +|+..|.+.+ ......+++.+++.|++.....+.
T Consensus 119 g~Gig~~-ll~~~~~~a~~~~g~~~i~l~v-----------~~~N~~a~~~y~k~GF~~~~~~~~ 171 (198)
T 2qml_A 119 GQGLIYP-LLLAIMQQKFQEPDTNTIVAEP-----------DRRNKKMIHVFKKCGFQPVKEVEL 171 (198)
T ss_dssp SSSTHHH-HHHHHHHHHHTSTTCCEEEECC-----------BTTCHHHHHHHHHTTCEEEEEEEC
T ss_pred CCCHHHH-HHHHHHHHHHhCCCCCEEEEec-----------CCCCHHHHHHHHHCCCEEEEEEec
Confidence 3334444 33567777866 6999988887 344567899999999988776554
No 108
>2ob0_A Human MAK3 homolog; acetyltransferase, structural genomics consortium, SGC; HET: ACO; 1.80A {Homo sapiens} PDB: 2psw_A* 3tfy_A*
Probab=41.45 E-value=60 Score=19.90 Aligned_cols=51 Identities=12% Similarity=0.208 Sum_probs=37.0
Q ss_pred CcHHHHHHHHHHHHHHHHHc-CCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEEEEEe
Q 043606 19 SSPYAAMLAAQDVSQRCKER-GITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIED 81 (101)
Q Consensus 19 ~t~~Aa~~a~~~~~~~~~~~-gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~~I~D 81 (101)
+.=++..+. +.+.+.+.+. |++.|.+.+. ..-..+++...+.|+.......
T Consensus 86 g~Gig~~ll-~~~~~~~~~~~g~~~i~l~~~-----------~~N~~a~~~y~k~GF~~~~~~~ 137 (170)
T 2ob0_A 86 RLGIGTKML-NHVLNICEKDGTFDNIYLHVQ-----------ISNESAIDFYRKFGFEIIETKK 137 (170)
T ss_dssp TSSHHHHHH-HHHHHHHHHHCCCSEEEEEEE-----------TTCHHHHHHHHHTTCEEEEEET
T ss_pred CcCHHHHHH-HHHHHHHHhcCCccEEEEEEe-----------cCCHHHHHHHHHcCCEEeEeee
Confidence 334555544 5678888887 9999999982 2345788989999998876554
No 109
>2g0w_A LMO2234 protein; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE PG4; 1.70A {Listeria monocytogenes} SCOP: c.1.15.4
Probab=40.61 E-value=46 Score=23.65 Aligned_cols=50 Identities=18% Similarity=0.290 Sum_probs=33.0
Q ss_pred HHHHHHHHHcCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEEEEE
Q 043606 29 QDVSQRCKERGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIE 80 (101)
Q Consensus 29 ~~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~~I~ 80 (101)
+.+++.+.++|+..|++..... -++ ...+...+..-+.|...||+|.++.
T Consensus 39 ~~~l~~a~~~G~~~vEl~~~~~-~~~-~~~~~~~~~~~~~l~~~gl~i~~~~ 88 (296)
T 2g0w_A 39 PKRVKVAAENGFDGIGLRAENY-VDA-LAAGLTDEDMLRILDEHNMKVTEVE 88 (296)
T ss_dssp HHHHHHHHHTTCSEEEEEHHHH-HHH-HHTTCCHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHcCCCEEEeCHHHH-HHH-HhcCCcHHHHHHHHHHcCCceEeeh
Confidence 4567888999999999986210 000 0012344556677888999999886
No 110
>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}
Probab=40.30 E-value=30 Score=27.52 Aligned_cols=59 Identities=12% Similarity=0.205 Sum_probs=40.2
Q ss_pred CCcHHHHHHHHHHHHHHHHHcCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEEEEEecCCC
Q 043606 18 ESSPYAAMLAAQDVSQRCKERGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPI 85 (101)
Q Consensus 18 k~t~~Aa~~a~~~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~~I~D~Tpi 85 (101)
..|-|.....++.+++. ....++-..|.| .|+|-=-..+.+.|.+.|.+|+.|.|.+-.
T Consensus 195 ~aTg~Gv~~~~~~~~~~-~g~~l~gk~vaV--------qG~GnVG~~~a~~L~~~GakVVavsD~~G~ 253 (419)
T 3aoe_E 195 DAAGLGALLVLEALAKR-RGLDLRGARVVV--------QGLGQVGAAVALHAERLGMRVVAVATSMGG 253 (419)
T ss_dssp CHHHHHHHHHHHHHHHH-HTCCCTTCEEEE--------ECCSHHHHHHHHHHHHTTCEEEEEEETTEE
T ss_pred cchHHHHHHHHHHHHHh-cCCCccCCEEEE--------ECcCHHHHHHHHHHHHCCCEEEEEEcCCCe
Confidence 55666666666655544 223455677888 677753445557788899999999998644
No 111
>3tcv_A GCN5-related N-acetyltransferase; GRAM negative coccobacillus, brucellosis, acyl CO-A, arylami transferase; 1.75A {Brucella melitensis biovar abortus 230ORGANISM_TAXID}
Probab=40.22 E-value=89 Score=21.50 Aligned_cols=51 Identities=18% Similarity=0.076 Sum_probs=38.3
Q ss_pred CCcHHHHHHHHHHHHHHHHH-cCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEEEEE
Q 043606 18 ESSPYAAMLAAQDVSQRCKE-RGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIE 80 (101)
Q Consensus 18 k~t~~Aa~~a~~~~~~~~~~-~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~~I~ 80 (101)
.+.-|+..+. +.+++.+.+ +|+..|.+.+ -..-..+++.+.+.|+...-+.
T Consensus 139 rgkGig~~ll-~~ll~~a~~~~g~~~i~l~v-----------~~~N~~s~~lyek~GF~~~G~~ 190 (246)
T 3tcv_A 139 SRRPAATEAQ-FLFMQYVFDVLGYRRYEWEC-----------HNENGPSRRAAERFGFRFEGIF 190 (246)
T ss_dssp TTSHHHHHHH-HHHHHHHHHTSCCSEEEEEE-----------ETTCHHHHHHHHHHTCEEEEEE
T ss_pred cCCCHHHHHH-HHHHHHHHHhcCcEEEEEEc-----------cCCCHHHHHHHHHCCCEEEEEE
Confidence 5666766644 567888876 7999999999 3345678999999999876543
No 112
>3fyn_A Integron gene cassette protein HFX_CASS3; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.45A {Uncultured bacterium}
Probab=39.98 E-value=22 Score=22.28 Aligned_cols=47 Identities=30% Similarity=0.458 Sum_probs=28.4
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEE
Q 043606 19 SSPYAAMLAAQDVSQRCKERGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIG 77 (101)
Q Consensus 19 ~t~~Aa~~a~~~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~ 77 (101)
+.=++.. +.+.+.+.+.+.|+..|.+.+ ......+++...+.|++..
T Consensus 114 g~Gig~~-ll~~~~~~a~~~g~~~i~l~~-----------~~~N~~a~~~y~k~GF~~~ 160 (176)
T 3fyn_A 114 GKGLGAA-ALQTVKQGCCDLGVRALLVET-----------GPEDHPARGVYSRAGFEES 160 (176)
T ss_dssp TSSHHHH-HHHHHHHHHHHTTCCCEECCC-----------C--------HHHHTTCCCC
T ss_pred CCCHHHH-HHHHHHHHHHHCCCCEEEEEe-----------cCCCHHHHHHHHHCCCeec
Confidence 3345544 445678889999999988877 3334568888888898765
No 113
>3tth_A Spermidine N1-acetyltransferase; central intermediary metabolism; 3.30A {Coxiella burnetii}
Probab=39.92 E-value=63 Score=19.73 Aligned_cols=50 Identities=14% Similarity=0.131 Sum_probs=35.8
Q ss_pred CCcHHHHHHHHHHHHHHHHH-cCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEEEE
Q 043606 18 ESSPYAAMLAAQDVSQRCKE-RGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRI 79 (101)
Q Consensus 18 k~t~~Aa~~a~~~~~~~~~~-~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~~I 79 (101)
++.-++..+. +.+.+.+.+ +|+..|.+.+ ...-..+++.+.+.|++....
T Consensus 96 rg~Gig~~ll-~~~~~~a~~~~~~~~i~~~~-----------~~~N~~a~~~y~k~GF~~~g~ 146 (170)
T 3tth_A 96 EGKGYATEAT-DLTVEYAFSILNLHKIYLLV-----------DEDNPAALHIYRKSGFAEEGK 146 (170)
T ss_dssp CSSCSHHHHH-HHHHHHHHHTSCCCEEEEEE-----------ETTCHHHHHHHHTTTCEEEEE
T ss_pred cCCCHHHHHH-HHHHHHHHhhCCceEEEEEe-----------cCCCHHHHHHHHHCCCeEEEE
Confidence 3344555444 456777855 6999999998 334467899999999998776
No 114
>3dsb_A Putative acetyltransferase; APC60368.2, ST genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; HET: MSE; 1.48A {Clostridium difficile}
Probab=39.90 E-value=53 Score=19.46 Aligned_cols=46 Identities=9% Similarity=0.053 Sum_probs=32.9
Q ss_pred cHHHHHHHHHHHHHHHHHcC-CcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEE
Q 043606 20 SPYAAMLAAQDVSQRCKERG-ITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIG 77 (101)
Q Consensus 20 t~~Aa~~a~~~~~~~~~~~g-i~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~ 77 (101)
.=++.. +.+.+.+.+.+.| +..+.+.+. .....+++...+.|++..
T Consensus 99 ~Gig~~-ll~~~~~~~~~~~~~~~i~~~~~-----------~~n~~a~~~y~k~Gf~~~ 145 (157)
T 3dsb_A 99 KGIFNY-LFNYIKNICDKDENIVGMRLYVE-----------KENINAKATYESLNMYEC 145 (157)
T ss_dssp SSHHHH-HHHHHHHHHHHCTTEEEEEEEEE-----------TTCTTHHHHHHTTTCEEC
T ss_pred CCHHHH-HHHHHHHHHHhcCCceEEEEecC-----------CCCHHHHHHHHHCCCEEe
Confidence 344444 4466888999999 999998883 223457888888898865
No 115
>1rm1_A Tata-box binding protein; yeast TFIIA, TBP protein, ATA-box DNA, transcription/DNA complex; 2.50A {Saccharomyces cerevisiae} SCOP: d.129.1.1 d.129.1.1
Probab=39.67 E-value=30 Score=25.69 Aligned_cols=36 Identities=22% Similarity=0.257 Sum_probs=31.4
Q ss_pred eeeeeccceeeccCCCCcHHHHHHHHHHHHHHHHHcCCc
Q 043606 3 LERITGGMKVKADRDESSPYAAMLAAQDVSQRCKERGIT 41 (101)
Q Consensus 3 ~~~SsG~~gfKg~r~k~t~~Aa~~a~~~~~~~~~~~gi~ 41 (101)
+.+++|-+...|++ +.-.+..|++++++.+.++|++
T Consensus 114 lIF~SGKiV~TGak---s~e~a~~A~~~i~~~L~~lg~~ 149 (240)
T 1rm1_A 114 LIFASGKMVVTGAK---SEDDSKLASRKYARIIQKIGFA 149 (240)
T ss_dssp EEETTSEEEEEEES---SHHHHHHHHHHHHHHHHHHTCC
T ss_pred EEECCCeEEEEecC---CHHHHHHHHHHHHHHHHHcCCC
Confidence 56789999999998 7778899999999999999974
No 116
>3u5e_D 60S ribosomal protein L5; translation, ribosome, ribosomal R ribosomal protein, STM1, eukaryotic ribosome; 3.00A {Saccharomyces cerevisiae} PDB: 3u5i_D 4b6a_D 3izc_Q 3izs_Q 3o58_E 3o5h_E 3jyw_E 1s1i_E
Probab=39.62 E-value=84 Score=24.21 Aligned_cols=63 Identities=21% Similarity=0.324 Sum_probs=42.0
Q ss_pred cHHHHHHHHHHHHHHHHHc--------CCcEEE-----------------EEEeecCCCcccCCCCChHHHHHHHHhCCC
Q 043606 20 SPYAAMLAAQDVSQRCKER--------GITALH-----------------IKLRATGGNKTKTPGPGAQSALRALARSGM 74 (101)
Q Consensus 20 t~~Aa~~a~~~~~~~~~~~--------gi~~v~-----------------V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl 74 (101)
.--||..++..++++|++. |+..+. +.|. .|+.+.. .|---..|+++....||
T Consensus 94 N~~AAy~vG~LiAeRAl~k~~ld~~y~G~~e~~g~~~~ve~~~~~~~~f~~~LD-vGl~rtt-tG~RVfaalKGA~DgGL 171 (297)
T 3u5e_D 94 NWAAAYATGLLIARRTLQKLGLDETYKGVEEVEGEYELTEAVEDGPRPFKVFLD-IGLQRTT-TGARVFGALKGASDGGL 171 (297)
T ss_dssp SHHHHHHHHHHHHHHHHHHTSTTSSCCCCSSCCCCCCCCCCCSSSCCCCBCEEE-CTTCCCC-TTCSHHHHHHHHHHHTC
T ss_pred cHHHHHHHHHHHHHHHHHhhCCcccccCccccccceeccccccCCCCceeEEEe-cCCCccC-ccceehhhhhcccccCc
Confidence 3447888889999999987 776521 3331 1333322 24444679999999999
Q ss_pred eEEEEEecCCCCCCCCCCC
Q 043606 75 KIGRIEDVTPIPTDSTRRK 93 (101)
Q Consensus 75 ~I~~I~D~TpiphNGcR~~ 93 (101)
. |||+--|-|
T Consensus 172 ~---------IPhs~~~fp 181 (297)
T 3u5e_D 172 Y---------VPHSENRFP 181 (297)
T ss_dssp B---------CCCCSTTSS
T ss_pred c---------cCCCccccc
Confidence 7 589877665
No 117
>3ktc_A Xylose isomerase; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.54A {Pectobacterium atrosepticum SCRI1043}
Probab=39.57 E-value=75 Score=23.04 Aligned_cols=46 Identities=24% Similarity=0.244 Sum_probs=33.3
Q ss_pred HHHHHHHHHc-CCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEEEEEe
Q 043606 29 QDVSQRCKER-GITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIED 81 (101)
Q Consensus 29 ~~~~~~~~~~-gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~~I~D 81 (101)
+..++.+.++ |+..|++.+. .....-.+.+-+.+...||+|..+.-
T Consensus 36 ~e~l~~aa~~~G~~~VEl~~~-------~~~~~~~~~l~~~l~~~Gl~i~~~~~ 82 (333)
T 3ktc_A 36 IDQINAAKEVGELSYVDLPYP-------FTPGVTLSEVKDALKDAGLKAIGITP 82 (333)
T ss_dssp HHHHHHHHHHSSEEEEEEEES-------CSTTCCHHHHHHHHHHHTCEEEEEEE
T ss_pred HHHHHHHHHhCCCCEEEecCC-------CcchhHHHHHHHHHHHcCCeEEEEec
Confidence 5578888999 9999999872 11133455566677888999988753
No 118
>3k92_A NAD-GDH, NAD-specific glutamate dehydrogenase; ROCG, oxidoreductase; 2.30A {Bacillus subtilis} PDB: 3k8z_A
Probab=38.41 E-value=26 Score=28.03 Aligned_cols=61 Identities=10% Similarity=0.102 Sum_probs=40.4
Q ss_pred CCcHHHHHHHHHHHHHHHHHcCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEEEEEecCCCCC
Q 043606 18 ESSPYAAMLAAQDVSQRCKERGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPIPT 87 (101)
Q Consensus 18 k~t~~Aa~~a~~~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~~I~D~Tpiph 87 (101)
..|-|....+++.+++.. ...++-..|.| .|+|.=-..+.+.|.+.|.+|+.|.|.+..=|
T Consensus 198 ~aTg~Gv~~~~~~~~~~~-g~~l~g~~vaV--------qG~GnVG~~aa~~l~e~GakVVavsD~~G~iy 258 (424)
T 3k92_A 198 TATAQGVTICIEEAVKKK-GIKLQNARIII--------QGFGNAGSFLAKFMHDAGAKVIGISDANGGLY 258 (424)
T ss_dssp THHHHHHHHHHHHHHHHT-TCCGGGCEEEE--------ECCSHHHHHHHHHHHHHTCEEEEEECSSCEEE
T ss_pred ccHHHHHHHHHHHHHHHc-CCCcccCEEEE--------ECCCHHHHHHHHHHHHCCCEEEEEECCCCcEE
Confidence 556666666655555432 33466678889 77875333455668888999999999875433
No 119
>2pdo_A Acetyltransferase YPEA; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; HET: MSE; 2.00A {Shigella flexneri 2A}
Probab=38.02 E-value=67 Score=19.49 Aligned_cols=47 Identities=17% Similarity=0.246 Sum_probs=33.7
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEE
Q 043606 19 SSPYAAMLAAQDVSQRCKERGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIG 77 (101)
Q Consensus 19 ~t~~Aa~~a~~~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~ 77 (101)
+.-++.++. +.+.+.+++.|+..+.+.+. .....+++-..+.|+...
T Consensus 83 g~GiG~~Ll-~~~~~~~~~~g~~~i~l~v~-----------~~n~~a~~~Y~k~GF~~~ 129 (144)
T 2pdo_A 83 GRGIANALL-NRLEKKLIARGCPKIQINVP-----------EDNDMVLGMYERLGYEHA 129 (144)
T ss_dssp TSCHHHHHH-HHHHHHHHHTTCCEEEEEEE-----------SSCHHHHHHHHHTTCEEC
T ss_pred CCcHHHHHH-HHHHHHHHHcCCCEEEEEEe-----------CCCHHHHHHHHHcCCccc
Confidence 334555544 45788899999999998882 234578888888998754
No 120
>2f9z_C Protein (chemotaxis methylation protein); bacterial chemotaxis, signal transduction, receptor deamidas aspartyl phosphatase, protein complex; 2.40A {Thermotoga maritima} SCOP: d.194.1.3
Probab=37.42 E-value=44 Score=23.14 Aligned_cols=57 Identities=21% Similarity=0.325 Sum_probs=41.7
Q ss_pred cHHHHHHHHHHHHHHHHHcCCc--EEEEEEeecCCCcccC----CC-CChHHHHHHHHhCCCeEEE
Q 043606 20 SPYAAMLAAQDVSQRCKERGIT--ALHIKLRATGGNKTKT----PG-PGAQSALRALARSGMKIGR 78 (101)
Q Consensus 20 t~~Aa~~a~~~~~~~~~~~gi~--~v~V~lrg~~g~~~kG----~G-~gr~~~lr~l~~~gl~I~~ 78 (101)
.-||- .|.+.+++.+.++|-. .+..++-| |++-+.+ +| .+-+.+.+.|++.||.|..
T Consensus 60 ~rY~d-~am~~Li~~m~~~Ga~~~~L~aKifG-GA~m~~~~~~~IG~rNv~~a~~~L~~~gI~i~a 123 (159)
T 2f9z_C 60 GKYAD-TAVKTLVEELKKMGAKVERLEAKIAG-GASMFESKGMNIGARNVEAVKKHLKDFGIKLLA 123 (159)
T ss_dssp GGBHH-HHHHHHHHHHHTTTCCGGGCEEEEEE-CCCCSCCCSSCHHHHHHHHHHHHHHHTTCCEEE
T ss_pred ccCHH-HHHHHHHHHHHHcCCCHHHEEEEEEe-CcccCcccccChHHHHHHHHHHHHHHCCCcEEE
Confidence 45655 4668899999998875 68888877 6666654 22 2456788889999999875
No 121
>3t9y_A Acetyltransferase, GNAT family; PSI-biology, structural genomics, midwest center for structu genomics, MCSG; HET: PGE; 2.00A {Staphylococcus aureus}
Probab=37.40 E-value=28 Score=20.82 Aligned_cols=49 Identities=16% Similarity=0.135 Sum_probs=24.3
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEE
Q 043606 19 SSPYAAMLAAQDVSQRCKERGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIG 77 (101)
Q Consensus 19 ~t~~Aa~~a~~~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~ 77 (101)
+-=++..+. +.+.+.+.+.|+..+.+.+. .......+++...+.|++..
T Consensus 94 g~Gig~~ll-~~~~~~~~~~g~~~i~l~~~---------~~~~N~~a~~~y~k~GF~~~ 142 (150)
T 3t9y_A 94 KKGYGKRLL-ADSEEFSKRLNCKAITLNSG---------NRNERLSAHKLYSDNGYVSN 142 (150)
T ss_dssp SSSHHHHHH-HHHHHHHHHTTCSCEEECCC---------CCC------------CCCCC
T ss_pred ccCHHHHHH-HHHHHHHHHcCCEEEEEEcC---------CCccchhHHHHHHHcCCEEe
Confidence 334555444 56788889999999888871 00344567777788887754
No 122
>4a17_M RPL5, 60S ribosomal protein L5; eukaryotic ribosome, ribosome, eukaryotic initiation factor 60S, translation, large ribosomal subunit; 3.52A {Tetrahymena thermophila} PDB: 4a1a_M 4a1c_M 4a1e_M
Probab=37.09 E-value=96 Score=23.93 Aligned_cols=64 Identities=25% Similarity=0.315 Sum_probs=41.4
Q ss_pred cHHHHHHHHHHHHHHHHHc--------CCcEE-----------------EEEEeecCCCcccCCCCChHHHHHHHHhCCC
Q 043606 20 SPYAAMLAAQDVSQRCKER--------GITAL-----------------HIKLRATGGNKTKTPGPGAQSALRALARSGM 74 (101)
Q Consensus 20 t~~Aa~~a~~~~~~~~~~~--------gi~~v-----------------~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl 74 (101)
.--||..++..++++|++. |+..+ .+.|. .|+.+.. .|---..|+++....||
T Consensus 94 N~~AAy~vG~LiAeRAl~k~~~d~~y~G~~e~~g~~~~ve~~~~~~~~f~~~LD-~Gl~rtt-~G~RVfaalKGA~DgGL 171 (301)
T 4a17_M 94 SYAAAYATGLLLARRLLKQIGLDTVYAGQTKVDGAYFNVDEDQKEKKPFKAILD-AGLVRTT-TGNRVFGVLKGACDGGI 171 (301)
T ss_dssp SHHHHHHHHHHHHHHHHHHHTCTTTCCCCSSCCCSCCCGGGTCCSSCCCBCEEE-CTTSCCC-SSCHHHHHHHHHHHTTC
T ss_pred cHHHHHHHHHHHHHHHHHhcCCcccccCccccccceeecccccCCCCceEEEEe-cCCcccC-cccchhhhhhcccccCc
Confidence 3357888889999999988 77721 12331 1223222 23333678999999999
Q ss_pred eEEEEEecCCCCCCCCCCCC
Q 043606 75 KIGRIEDVTPIPTDSTRRKG 94 (101)
Q Consensus 75 ~I~~I~D~TpiphNGcR~~K 94 (101)
. |||+--|-|.
T Consensus 172 ~---------IPhs~~~fpg 182 (301)
T 4a17_M 172 N---------IPHSESRFPG 182 (301)
T ss_dssp B---------CCCCSSSSSS
T ss_pred c---------cCCCCccCCC
Confidence 7 5888766653
No 123
>2bei_A Diamine acetyltransferase 2; SSAT2, BC011751, AAH11751, thialysine N-acetyltransferase, structural genomics, protein structure initiative, PSI; HET: ACO; 1.84A {Homo sapiens} SCOP: d.108.1.1 PDB: 2q4v_A*
Probab=36.94 E-value=79 Score=19.96 Aligned_cols=46 Identities=11% Similarity=0.157 Sum_probs=33.6
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeE
Q 043606 19 SSPYAAMLAAQDVSQRCKERGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKI 76 (101)
Q Consensus 19 ~t~~Aa~~a~~~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I 76 (101)
+.=++.++. +.+.+.+.+.|+..|.+.+ ......|++--.+.|++.
T Consensus 102 g~GiG~~Ll-~~~~~~a~~~g~~~i~L~v-----------~~~N~~A~~fY~k~GF~~ 147 (170)
T 2bei_A 102 GQGIGSKII-KKVAEVALDKGCSQFRLAV-----------LDWNQRAMDLYKALGAQD 147 (170)
T ss_dssp SSSHHHHHH-HHHHHHHHHTTCCEEEEEE-----------ETTCHHHHHHHHHTTCEE
T ss_pred CCCHHHHHH-HHHHHHHHHCCCCEEEEEE-----------eccCHHHHHHHHHCCCEe
Confidence 344555544 5688889999999999988 233557888788889875
No 124
>3tlx_A Adenylate kinase 2; structural genomics, structural genomics consortium, SGC, RO fold, transferase, ATP binding, phosphorylation; HET: ADP ATP AMP; 2.75A {Plasmodium falciparum}
Probab=36.84 E-value=32 Score=24.13 Aligned_cols=47 Identities=13% Similarity=0.085 Sum_probs=30.7
Q ss_pred HHHHHHHHcCCcEEEEEEeecCCCcccCCCCChHHHHHHHHh-CCCeEEEEEecC
Q 043606 30 DVSQRCKERGITALHIKLRATGGNKTKTPGPGAQSALRALAR-SGMKIGRIEDVT 83 (101)
Q Consensus 30 ~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~-~gl~I~~I~D~T 83 (101)
.+++.....--+...|.|-| ++|.|+-+..+.|.. .|+.++++.|..
T Consensus 17 ~~~~~~~~~~~~~~~I~l~G-------~~GsGKsT~a~~L~~~~g~~~is~~~~~ 64 (243)
T 3tlx_A 17 ELKRRYACLSKPDGRYIFLG-------APGSGKGTQSLNLKKSHCYCHLSTGDLL 64 (243)
T ss_dssp HHHHHHHHHTSCCEEEEEEC-------CTTSSHHHHHHHHHHHHCCEEEEHHHHH
T ss_pred HHHHHHHhccCCCcEEEEEC-------CCCCCHHHHHHHHHHHhCCeEEecHHHH
Confidence 34444433322445566644 589999999999965 488888776654
No 125
>3iz5_Q 60S ribosomal protein L5 (L18P); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_Q
Probab=36.68 E-value=83 Score=24.30 Aligned_cols=63 Identities=24% Similarity=0.244 Sum_probs=42.3
Q ss_pred HHHHHHHHHHHHHHHHHc--------CCcEEE----------------EEEeecCCCcccCCCCChHHHHHHHHhCCCeE
Q 043606 21 PYAAMLAAQDVSQRCKER--------GITALH----------------IKLRATGGNKTKTPGPGAQSALRALARSGMKI 76 (101)
Q Consensus 21 ~~Aa~~a~~~~~~~~~~~--------gi~~v~----------------V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I 76 (101)
--||..++..++++|++. |+..+. +.|- .|+.+.. .|---..++++....||.
T Consensus 96 ~aAAy~tGlLiA~RAl~k~~ld~~y~G~~e~~g~~~~ve~~~~~~~f~~~LD-iGL~rtt-tG~RVfaalKGA~DgGL~- 172 (304)
T 3iz5_Q 96 YAAAYCTGLLLARRVLTLRGLDQEYEGNVEATGEDYYVEPADERRPFRALLD-VGLIRTT-TGNRVFGALKGALDGGLD- 172 (304)
T ss_dssp HHHHHHHHHHHHHHHHTTCSSCCCCCSSSCCCSCCCSSCCSSCSCCCSCEEE-CTTCCCC-SSCHHHHHHHHHHTTTCC-
T ss_pred HHHHHHHHHHHHHHHHHhhCCccccCCccccccceecccccCCCCCceEEEe-cCCcccc-cCceeEEeeccccccCcc-
Confidence 347888889999999998 877521 2331 1333322 233346688988889997
Q ss_pred EEEEecCCCCCCCCCCCC
Q 043606 77 GRIEDVTPIPTDSTRRKG 94 (101)
Q Consensus 77 ~~I~D~TpiphNGcR~~K 94 (101)
|||+--|-|.
T Consensus 173 --------IPhs~~~fpg 182 (304)
T 3iz5_Q 173 --------IPHSDKRFAG 182 (304)
T ss_dssp --------CCCCSSSCCC
T ss_pred --------cCCCcccccC
Confidence 5998877774
No 126
>2ft0_A TDP-fucosamine acetyltransferase; GNAT fold acetyltransferase, structural genomics, montreal-K bacterial structural genomics initiative, BSGI; HET: ACO; 1.66A {Escherichia coli} PDB: 2fs5_A*
Probab=36.39 E-value=98 Score=20.89 Aligned_cols=41 Identities=24% Similarity=0.342 Sum_probs=31.4
Q ss_pred HHHHHHHHHHcCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEEEE
Q 043606 28 AQDVSQRCKERGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRI 79 (101)
Q Consensus 28 ~~~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~~I 79 (101)
.+.+.+.+.+.|+..|.+.+. ..-..+++...+.|++....
T Consensus 189 l~~~~~~a~~~g~~~i~l~v~-----------~~N~~A~~lY~k~GF~~~~~ 229 (235)
T 2ft0_A 189 MQTALNWAYARGKTTLRVATQ-----------MGNTAALKRYIQSGANVEST 229 (235)
T ss_dssp HHHHHHHHHHTTCSEEEEEEE-----------TTCHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHcCCCEEEEEEe-----------cCCHHHHHHHHHCCCEEeEE
Confidence 345677888899999999983 22357889899999987654
No 127
>3eg7_A Spermidine N1-acetyltransferase; structural genomics, IDP016 transferase, center for structural genomics of infectious D csgid; HET: MSE; 2.38A {Vibrio cholerae} SCOP: d.108.1.0
Probab=36.13 E-value=74 Score=19.44 Aligned_cols=49 Identities=8% Similarity=0.071 Sum_probs=35.5
Q ss_pred CcHHHHHHHHHHHHHHHHH-cCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEEEE
Q 043606 19 SSPYAAMLAAQDVSQRCKE-RGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRI 79 (101)
Q Consensus 19 ~t~~Aa~~a~~~~~~~~~~-~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~~I 79 (101)
+.-++..+. +.+.+.+.+ +|++.|.+.+ -..-..+++.+.+.|+.....
T Consensus 98 g~Gig~~ll-~~~~~~a~~~~g~~~i~~~~-----------~~~N~~a~~~y~k~GF~~~~~ 147 (176)
T 3eg7_A 98 GKGFARTLI-NRALDYSFTILNLHKIYLHV-----------AVENPKAVHLYEECGFVEEGH 147 (176)
T ss_dssp TSSCHHHHH-HHHHHHHHHTSCCSEEEEEE-----------ETTCHHHHHHHHHTTCEEEEE
T ss_pred CCCHHHHHH-HHHHHHHHHhCCccEEEEEe-----------hhcCHHHHHHHHHCCCEEeee
Confidence 334455443 557777876 5999999998 333467889999999988766
No 128
>1vkc_A Putative acetyl transferase; structural genomics, pyrococcus furiosus southeast collaboratory for structural genomics, secsg; 1.89A {Pyrococcus furiosus} SCOP: d.108.1.1
Probab=35.11 E-value=45 Score=20.51 Aligned_cols=46 Identities=17% Similarity=0.270 Sum_probs=31.9
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEE
Q 043606 19 SSPYAAMLAAQDVSQRCKERGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIG 77 (101)
Q Consensus 19 ~t~~Aa~~a~~~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~ 77 (101)
+.=++.++. +.+.+.+.+.|+..|.+.+. ... .+++.+.+.|+...
T Consensus 105 g~Gig~~ll-~~~~~~~~~~g~~~i~l~~~-----------~~n-~a~~~y~k~GF~~~ 150 (158)
T 1vkc_A 105 GLGIGSALL-RKAEEWAKERGAKKIVLRVE-----------IDN-PAVKWYEERGYKAR 150 (158)
T ss_dssp TSSHHHHHH-HHHHHHHHHTTCSCEEECCC-----------TTC-THHHHHHHTTCCCC
T ss_pred CCCHHHHHH-HHHHHHHHHcCCcEEEEEEe-----------CCC-cHHHHHHHCCCEee
Confidence 344555544 56788888999999988872 222 57788888888754
No 129
>3l23_A Sugar phosphate isomerase/epimerase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=35.06 E-value=75 Score=22.82 Aligned_cols=48 Identities=17% Similarity=0.179 Sum_probs=33.1
Q ss_pred HHHHHHHHHcCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEEEEE
Q 043606 29 QDVSQRCKERGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIE 80 (101)
Q Consensus 29 ~~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~~I~ 80 (101)
+.+++.+.++|+..|++..... + .-.+.-.+..-+.|...||+|.++.
T Consensus 32 ~~~l~~~a~~G~~~VEl~~~~~-~---~~~~~~~~~~~~~l~~~GL~v~~~~ 79 (303)
T 3l23_A 32 AANLRKVKDMGYSKLELAGYGK-G---AIGGVPMMDFKKMAEDAGLKIISSH 79 (303)
T ss_dssp HHHHHHHHHTTCCEEEECCEET-T---EETTEEHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHcCCCEEEeccccC-c---ccCCCCHHHHHHHHHHcCCeEEEEe
Confidence 4678899999999999975221 0 0122234555677888999999884
No 130
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=34.47 E-value=77 Score=22.08 Aligned_cols=46 Identities=11% Similarity=0.084 Sum_probs=30.8
Q ss_pred HHHHHHHHcCCcEEEEEEeecCCCcccCCCCC-hHHHHHHHHhCCCeEEEEE
Q 043606 30 DVSQRCKERGITALHIKLRATGGNKTKTPGPG-AQSALRALARSGMKIGRIE 80 (101)
Q Consensus 30 ~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~g-r~~~lr~l~~~gl~I~~I~ 80 (101)
.+++.+.++|+..|++.+... ..+... .+...+.|...||+|..+.
T Consensus 25 ~~l~~~~~~G~~~vEl~~~~~-----~~~~~~~~~~~~~~l~~~gl~~~~~~ 71 (290)
T 3tva_A 25 VHLEVAQDLKVPTVQVHAPHP-----HTRTREHAQAFRAKCDAAGIQVTVIF 71 (290)
T ss_dssp BCHHHHHHTTCSEEEEECCCG-----GGCSHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHcCCCEEEecCCCC-----CcCCHHHHHHHHHHHHHcCCEEEEEe
Confidence 357788999999999998321 111111 3335566778899999884
No 131
>1v9l_A Glutamate dehydrogenase; protein-NAD complex, oxidoreductase; HET: NAD; 2.80A {Pyrobaculum islandicum} SCOP: c.2.1.7 c.58.1.1
Probab=34.33 E-value=53 Score=26.12 Aligned_cols=61 Identities=16% Similarity=0.305 Sum_probs=41.8
Q ss_pred CCcHHHHHHHHHHHHHHHHHcCCcEEEEEEeecCCCcccCCCC-ChHHHHHHHHhCCCeEEEEEecCCCCCC
Q 043606 18 ESSPYAAMLAAQDVSQRCKERGITALHIKLRATGGNKTKTPGP-GAQSALRALARSGMKIGRIEDVTPIPTD 88 (101)
Q Consensus 18 k~t~~Aa~~a~~~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~-gr~~~lr~l~~~gl~I~~I~D~TpiphN 88 (101)
..|-|.+..+++.+++.. ...++...|.| .|+|- |..++ +.|.+.|.+|+.|.|.+..=||
T Consensus 187 ~aTg~Gv~~~~~~~~~~~-g~~l~gk~vaV--------qG~GnVG~~aa-~~L~e~GakVVavsD~~G~i~d 248 (421)
T 1v9l_A 187 YATGFGVAVATREMAKKL-WGGIEGKTVAI--------QGMGNVGRWTA-YWLEKMGAKVIAVSDINGVAYR 248 (421)
T ss_dssp GHHHHHHHHHHHHHHHHH-HSCCTTCEEEE--------ECCSHHHHHHH-HHHHTTTCEEEEEECSSCEEEC
T ss_pred cchHHHHHHHHHHHHHhc-CCCcCCCEEEE--------ECcCHHHHHHH-HHHHHCCCEEEEEECCCcEEEC
Confidence 456666666666555552 34566677888 67774 55555 7788899999999998765443
No 132
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=34.01 E-value=83 Score=21.64 Aligned_cols=44 Identities=11% Similarity=-0.068 Sum_probs=31.2
Q ss_pred HHHHHHHHHcCCcEEEEEEeecCCCcccCC--CCCh---HHHHHHHHhCCCeEEEEE
Q 043606 29 QDVSQRCKERGITALHIKLRATGGNKTKTP--GPGA---QSALRALARSGMKIGRIE 80 (101)
Q Consensus 29 ~~~~~~~~~~gi~~v~V~lrg~~g~~~kG~--G~gr---~~~lr~l~~~gl~I~~I~ 80 (101)
+.+++.+.++|+..|++.. ..+ +... +...+.|...||+|.++.
T Consensus 33 ~~~l~~~~~~G~~~vEl~~--------~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~ 81 (257)
T 3lmz_A 33 DTTLKTLERLDIHYLCIKD--------FHLPLNSTDEQIRAFHDKCAAHKVTGYAVG 81 (257)
T ss_dssp HHHHHHHHHTTCCEEEECT--------TTSCTTCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHhCCCEEEEec--------ccCCCCCCHHHHHHHHHHHHHcCCeEEEEe
Confidence 5678899999999999886 211 2211 345566778899998875
No 133
>3q71_A Poly [ADP-ribose] polymerase 14; structural genomics, structural genomics consortium, SGC, transferase, PARP14 macro 2; HET: AR6; 2.20A {Homo sapiens}
Probab=33.27 E-value=32 Score=24.93 Aligned_cols=38 Identities=18% Similarity=0.174 Sum_probs=29.9
Q ss_pred eeeeccceeeccCCCCcHHHHHHHHHHHHHHHHHc---CCcEEEEEE
Q 043606 4 ERITGGMKVKADRDESSPYAAMLAAQDVSQRCKER---GITALHIKL 47 (101)
Q Consensus 4 ~~SsG~~gfKg~r~k~t~~Aa~~a~~~~~~~~~~~---gi~~v~V~l 47 (101)
+.|+|..||.... ||+.+.+.+.+.+.+. .++.|.+.+
T Consensus 156 aIsTG~~G~P~~~------aA~i~~~~v~~fl~~~~~~~l~~V~fv~ 196 (221)
T 3q71_A 156 AIGTGNLGFPKNI------FAELIISEVFKFSSKNQLKTLQEVHFLL 196 (221)
T ss_dssp CTTSSTTCCCHHH------HHHHHHHHHHHHHHHCCCSSCCEEEEEE
T ss_pred cccCCCCCCCHHH------HHHHHHHHHHHHHHHcCCCCCCEEEEEE
Confidence 3478888998877 8888888888877765 577888888
No 134
>1k77_A EC1530, hypothetical protein YGBM; TIM barrel, structural genomics, PSI, structure initiative; 1.63A {Escherichia coli} SCOP: c.1.15.5
Probab=33.15 E-value=50 Score=22.54 Aligned_cols=42 Identities=7% Similarity=0.152 Sum_probs=30.9
Q ss_pred HHHHHHHHcCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEEEEE
Q 043606 30 DVSQRCKERGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIE 80 (101)
Q Consensus 30 ~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~~I~ 80 (101)
..++.+.++|+..|++.. + .+...+..-+.|...||++.++.
T Consensus 19 ~~l~~~~~~G~~~vEl~~--~-------~~~~~~~~~~~l~~~gl~~~~~~ 60 (260)
T 1k77_A 19 ERFAAARKAGFDAVEFLF--P-------YNYSTLQIQKQLEQNHLTLALFN 60 (260)
T ss_dssp GHHHHHHHHTCSEEECSC--C-------TTSCHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHhCCCEEEecC--C-------CCCCHHHHHHHHHHcCCceEEEe
Confidence 456778889999999876 1 12334556677888999999874
No 135
>2qul_A D-tagatose 3-epimerase; beta/alpha barrel, isomerase; 1.79A {Pseudomonas cichorii} PDB: 2ou4_A 2qum_A* 2qun_A*
Probab=33.15 E-value=54 Score=22.74 Aligned_cols=47 Identities=11% Similarity=0.087 Sum_probs=30.6
Q ss_pred HHHHHHHHHcCCcEEEEEEeecCCCcccCCC-CChHHHHHHHHhCCCeEEEEE
Q 043606 29 QDVSQRCKERGITALHIKLRATGGNKTKTPG-PGAQSALRALARSGMKIGRIE 80 (101)
Q Consensus 29 ~~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G-~gr~~~lr~l~~~gl~I~~I~ 80 (101)
+.+++.+.++|+..|++..... .... ...+...+.|...||.|..+.
T Consensus 20 ~~~l~~~~~~G~~~vEl~~~~~-----~~~~~~~~~~~~~~l~~~gl~~~~~~ 67 (290)
T 2qul_A 20 PATAKRIAGLGFDLMEISLGEF-----HNLSDAKKRELKAVADDLGLTVMCCI 67 (290)
T ss_dssp HHHHHHHHHTTCSEEEEESTTG-----GGSCHHHHHHHHHHHHHHTCEEEEEE
T ss_pred HHHHHHHHHhCCCEEEEecCCc-----cccchhhHHHHHHHHHHcCCceEEec
Confidence 4567788899999999987210 0000 123345556777899999875
No 136
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=33.13 E-value=43 Score=23.02 Aligned_cols=22 Identities=32% Similarity=0.644 Sum_probs=15.8
Q ss_pred HHHHH-HHhCCCeEEEEEecCCCC
Q 043606 64 SALRA-LARSGMKIGRIEDVTPIP 86 (101)
Q Consensus 64 ~~lr~-l~~~gl~I~~I~D~Tpip 86 (101)
.+|+. |+..|++|.+|.+ ||+|
T Consensus 3 ~~~~~~l~~~~~~v~~v~~-~p~~ 25 (216)
T 1eej_A 3 AAIQQTLAKMGIKSSDIQP-APVA 25 (216)
T ss_dssp HHHHHHHHHTTCCEEEEEE-CSST
T ss_pred HHHHHHHHHcCCceeeeec-CCCC
Confidence 34554 7777999999876 6665
No 137
>3mgd_A Predicted acetyltransferase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; HET: ACO; 1.90A {Clostridium acetobutylicum}
Probab=33.10 E-value=23 Score=21.38 Aligned_cols=50 Identities=12% Similarity=0.054 Sum_probs=34.2
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEEEEEecC
Q 043606 19 SSPYAAMLAAQDVSQRCKERGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVT 83 (101)
Q Consensus 19 ~t~~Aa~~a~~~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~~I~D~T 83 (101)
+.=++.++. +.+.+.+.+.|+..+.+.. + ..+++..++.|++...-.+.+
T Consensus 98 g~Gig~~Ll-~~~~~~~~~~g~~~i~l~~-----------n---~~a~~~y~k~GF~~~~~~~~~ 147 (157)
T 3mgd_A 98 GNGIATGML-DRLVNEAKERNIHKICLVA-----------S---KLGRPVYKKYGFQDTDEWLEL 147 (157)
T ss_dssp TSSHHHHHH-HHHHHHHHHTTCCCEEECC-----------C---TTHHHHHHHHTCCCCTTCCCC
T ss_pred CCCHHHHHH-HHHHHHHHHCCCCEEEEEe-----------C---cccHHHHHHcCCeecceEEEE
Confidence 334555544 5688889999999888766 1 257788888898876433333
No 138
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=32.85 E-value=38 Score=22.22 Aligned_cols=27 Identities=15% Similarity=0.180 Sum_probs=23.1
Q ss_pred hHHHHHHHHhCCCeEEEEEecCCCCCC
Q 043606 62 AQSALRALARSGMKIGRIEDVTPIPTD 88 (101)
Q Consensus 62 r~~~lr~l~~~gl~I~~I~D~TpiphN 88 (101)
.+.....|..+|+++..+.+.++.||.
T Consensus 162 ~~~~~~~l~~~Gf~~~~~~~~~~~p~~ 188 (203)
T 3h2b_A 162 LPELAQALETAGFQVTSSHWDPRFPHA 188 (203)
T ss_dssp HHHHHHHHHHTTEEEEEEEECTTSSEE
T ss_pred HHHHHHHHHHCCCcEEEEEecCCCcch
Confidence 567778889999999999999997773
No 139
>4hty_A Cellulase; (alpha/beta)8 barrel, family 5 endoglucanase, hydrolase; 2.00A {Uncultured bacterium} PDB: 4hu0_A*
Probab=32.46 E-value=69 Score=23.81 Aligned_cols=37 Identities=11% Similarity=0.110 Sum_probs=28.7
Q ss_pred HHHHHHHHcCCcEEEEEEeecCCCcccCCCCCh-------------HHHHHHHHhCCCeEE
Q 043606 30 DVSQRCKERGITALHIKLRATGGNKTKTPGPGA-------------QSALRALARSGMKIG 77 (101)
Q Consensus 30 ~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~gr-------------~~~lr~l~~~gl~I~ 77 (101)
.-++.++++|++.|+|-+ .+.. +.+|..+.+.||.|+
T Consensus 89 ~di~~ik~~G~N~VRi~~-----------~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~Vi 138 (359)
T 4hty_A 89 KHFEVIRSWGANVVRVPV-----------HPRAWKERGVKGYLELLDQVVAWNNELGIYTI 138 (359)
T ss_dssp HHHHHHHHTTCSEEEEEE-----------CHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHhcCCCEEEEec-----------cHHHhhccCCHHHHHHHHHHHHHHHHCCCEEE
Confidence 346678999999999998 3333 567888888899876
No 140
>3sgv_B Undecaprenyl pyrophosphate synthase; alpha/beta, transferase; HET: 2BJ; 1.61A {Escherichia coli} PDB: 1jp3_A* 1v7u_A* 1x06_A* 1x07_A* 2e98_A* 2e99_A* 2e9a_A* 2e9c_A* 2e9d_A* 1ueh_A 3sgt_B* 3qas_B* 3sgx_A* 3sh0_B* 3th8_A* 4h2j_A* 4h2m_A* 4h2o_B* 4h38_A* 4h3a_A* ...
Probab=31.87 E-value=1.5e+02 Score=22.03 Aligned_cols=63 Identities=16% Similarity=0.248 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHHHHHcCCcEEEEEEeecCCCcccCCCCChHH-----------HHHHHHhCCCeEEEEEecCCCCC
Q 043606 23 AAMLAAQDVSQRCKERGITALHIKLRATGGNKTKTPGPGAQS-----------ALRALARSGMKIGRIEDVTPIPT 87 (101)
Q Consensus 23 Aa~~a~~~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~gr~~-----------~lr~l~~~gl~I~~I~D~Tpiph 87 (101)
+...+...+++-|.++||+.|.|+.--+ -||..- -.=-+. -+..|...|+.|..|-|...+|.
T Consensus 45 ~G~~~l~~i~~~c~~lGI~~lTlYaFSt-ENwkRp-~~EV~~Lm~L~~~~l~~~~~~l~~~~vrvr~iGd~~~Lp~ 118 (253)
T 3sgv_B 45 AGAKSVRRAVSFAANNGIEALTLYAFSS-ENWNRP-AQEVSALMELFVWALDSEVKSLHRHNVRLRIIGDTSRFNS 118 (253)
T ss_dssp HHHHHHHHHHHHHHHTTCSEEEEECC-------------CHHHHHHHHTTHHHHHHHHHHTTCEEEEESCGGGSCH
T ss_pred HHHHHHHHHHHHHHHcCCCEEEEEEEch-hccCCC-HHHHHHHHHHHHHHHHHHHHHHHHCCeEEEEEeehhhCCH
Confidence 3444556788889999999999995322 111110 000011 12334567999999999988874
No 141
>3ur8_A Glucan endo-1,3-beta-D-glucosidase; glucoside hydrolase, GH17 family, pathogenesis-related class protein (PR-2), TIM barrel; 1.26A {Solanum tuberosum} PDB: 3ur7_A
Probab=31.83 E-value=86 Score=23.97 Aligned_cols=36 Identities=25% Similarity=0.313 Sum_probs=25.7
Q ss_pred HHHHHHHHcCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEEE
Q 043606 30 DVSQRCKERGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGR 78 (101)
Q Consensus 30 ~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~~ 78 (101)
.+++.++..|++.|+|+= .. ..+|.+|..+|++|..
T Consensus 19 ~Vv~llks~gi~~VRlY~----------~D---~~vL~Al~~sgi~V~l 54 (323)
T 3ur8_A 19 DVIKLYNANNIKKMRIYY----------PH---TNVFNALKGSNIEIIL 54 (323)
T ss_dssp HHHHHHHHTTCCEEEESS----------CC---HHHHHHHTTCCCEEEE
T ss_pred HHHHHHHhCCCCeEEecC----------CC---HHHHHHHHhcCCeEEE
Confidence 355566778999655542 23 6899999999998764
No 142
>1wwz_A Hypothetical protein PH1933; structural genomics, pyrococcus horikoshii OT3, riken struct genomics/proteomics initiative, RSGI; HET: ACO; 1.75A {Pyrococcus horikoshii} SCOP: d.108.1.1
Probab=31.82 E-value=93 Score=19.28 Aligned_cols=47 Identities=11% Similarity=0.041 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHHHHHHHcCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEEEEE
Q 043606 21 PYAAMLAAQDVSQRCKERGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIE 80 (101)
Q Consensus 21 ~~Aa~~a~~~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~~I~ 80 (101)
=++.++. +.+.+.+.+.| ..|.+.+ ......|++-..+.|++.....
T Consensus 101 GiG~~Ll-~~~~~~~~~~g-~~i~l~v-----------~~~N~~A~~fY~k~GF~~~~~~ 147 (159)
T 1wwz_A 101 GIGRKLL-ITCLDFLGKYN-DTIELWV-----------GEKNYGAMNLYEKFGFKKVGKS 147 (159)
T ss_dssp SHHHHHH-HHHHHHHHTTC-SEEEEEE-----------ETTCHHHHHHHHHTTCEEEEEE
T ss_pred CHHHHHH-HHHHHHHHhcC-CEEEEEE-----------eCCCHHHHHHHHHCCCEEcccc
Confidence 3555444 56788889999 9999988 2334678888899999876543
No 143
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A
Probab=31.28 E-value=49 Score=26.21 Aligned_cols=59 Identities=15% Similarity=0.098 Sum_probs=39.3
Q ss_pred CCcHHHHHHHHHHHHHHHHHcC--CcEEEEEEeecCCCcccCCCC-ChHHHHHHHHh-CCCeEEEEEecCCCCCC
Q 043606 18 ESSPYAAMLAAQDVSQRCKERG--ITALHIKLRATGGNKTKTPGP-GAQSALRALAR-SGMKIGRIEDVTPIPTD 88 (101)
Q Consensus 18 k~t~~Aa~~a~~~~~~~~~~~g--i~~v~V~lrg~~g~~~kG~G~-gr~~~lr~l~~-~gl~I~~I~D~TpiphN 88 (101)
..|-|.+..+++.+++ ++| ++...|-| .|+|- |. .+.+.|.+ .|.+|+.|.|.+-.-||
T Consensus 186 ~aTg~Gv~~~~~~~~~---~~g~~l~g~~vaV--------qG~GnVG~-~~a~~L~e~~GakvVavsD~~G~i~d 248 (415)
T 2tmg_A 186 EATGRGVKVCAGLAMD---VLGIDPKKATVAV--------QGFGNVGQ-FAALLISQELGSKVVAVSDSRGGIYN 248 (415)
T ss_dssp THHHHHHHHHHHHHHH---HTTCCTTTCEEEE--------ECCSHHHH-HHHHHHHHTTCCEEEEEECSSCEEEC
T ss_pred cchHHHHHHHHHHHHH---HcCCCcCCCEEEE--------ECCcHHHH-HHHHHHHHhcCCEEEEEEeCCCeEEC
Confidence 4565665555554444 355 45577888 67774 54 45577887 89999999998755443
No 144
>3kkw_A Putative uncharacterized protein; acetyltransferase, GNAT family, structural genomics, PSI, protein structure initiative; 1.41A {Pseudomonas aeruginosa PAO1}
Probab=31.16 E-value=1e+02 Score=19.48 Aligned_cols=52 Identities=13% Similarity=0.081 Sum_probs=37.7
Q ss_pred CcHHHHHHHHHHHHHHHHHc-CCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEEEEEec
Q 043606 19 SSPYAAMLAAQDVSQRCKER-GITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDV 82 (101)
Q Consensus 19 ~t~~Aa~~a~~~~~~~~~~~-gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~~I~D~ 82 (101)
+.=++.++. +.+.+.+.+. +++.|.+.+ ......+++...+.|++.......
T Consensus 111 g~Gig~~Ll-~~~~~~a~~~~~~~~i~l~v-----------~~~N~~a~~~y~k~GF~~~~~~~~ 163 (182)
T 3kkw_A 111 GLGVARYLI-GVMENLAREQYKARLMKISC-----------FNANAAGLLLYTQLGYQPRAIAER 163 (182)
T ss_dssp TSSHHHHHH-HHHHHHHHHHHCCSEEEEEE-----------ETTCHHHHHHHHHTTCEEEEEEEE
T ss_pred CCCHHHHHH-HHHHHHHHhcCCccEEEEEE-----------ecCCHHHHHHHHHCCCeEeccccc
Confidence 344555544 5678888887 888999988 233567889999999998876554
No 145
>1yx1_A Hypothetical protein PA2260; structural genomics, PSI, PROT structure initiative; HET: MSE; 1.80A {Pseudomonas aeruginosa PAO1} SCOP: c.1.15.7
Probab=31.13 E-value=71 Score=22.10 Aligned_cols=46 Identities=9% Similarity=0.052 Sum_probs=31.5
Q ss_pred HHHHHHHHHcCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEEEEE
Q 043606 29 QDVSQRCKERGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIE 80 (101)
Q Consensus 29 ~~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~~I~ 80 (101)
+.+++.+.++|+..|++... .... ....+.+.+.|...||+|..+.
T Consensus 26 ~~~l~~a~~~G~~~vEl~~~-----~~~~-~~~~~~~~~~l~~~gl~i~~~~ 71 (264)
T 1yx1_A 26 ASFLPLLAMAGAQRVELREE-----LFAG-PPDTEALTAAIQLQGLECVFSS 71 (264)
T ss_dssp GGGHHHHHHHTCSEEEEEGG-----GCSS-CCCHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHcCCCEEEEEHH-----hcCC-CHHHHHHHHHHHHcCCEEEEec
Confidence 45788899999999999751 0011 1134556667888999998663
No 146
>2zw5_A Bleomycin acetyltransferase; dimer, two domains; HET: COA; 2.40A {Streptomyces verticillus} PDB: 2zw4_A* 2zw6_A 2zw7_A*
Probab=31.02 E-value=1.3e+02 Score=20.62 Aligned_cols=50 Identities=20% Similarity=0.264 Sum_probs=36.7
Q ss_pred CCcHHHHHHHHHHHHHHH-HHcCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEEEE
Q 043606 18 ESSPYAAMLAAQDVSQRC-KERGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRI 79 (101)
Q Consensus 18 k~t~~Aa~~a~~~~~~~~-~~~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~~I 79 (101)
++.=|+..+. +.+.+.+ .++|+..|.+.+. ..-..+++.+.+.|++....
T Consensus 104 ~g~G~g~~l~-~~l~~~a~~~~g~~~i~~~v~-----------~~N~~s~~ly~k~GF~~~g~ 154 (301)
T 2zw5_A 104 WGHGYATEAA-AAVVGHALEDGGLDRVEAWIE-----------AGNRRSLAVAARVGLTERAR 154 (301)
T ss_dssp TTTTHHHHHH-HHHHHHHHTTTCCSEEEEEEE-----------SSCHHHHHHHHHTTCEEEEE
T ss_pred cCCCHHHHHH-HHHHHHHHhcCCccEEEEEeC-----------CCCHHHHHHHHHcCCcCcce
Confidence 4455665544 5677778 5579999999993 33567899999999988765
No 147
>2r7h_A Putative D-alanine N-acetyltransferase of GNAT FA; putative acetyltransferase of the GNAT family; 1.85A {Desulfovibrio desulfuricans subsp}
Probab=30.76 E-value=94 Score=18.97 Aligned_cols=52 Identities=15% Similarity=0.094 Sum_probs=36.9
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEEEEE
Q 043606 19 SSPYAAMLAAQDVSQRCKERGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIE 80 (101)
Q Consensus 19 ~t~~Aa~~a~~~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~~I~ 80 (101)
+.=++..+ .+.+.+.+.+.|++.+.+.+- .......+++...+.|++.....
T Consensus 108 g~Gig~~l-l~~~~~~~~~~g~~~i~l~~~---------~~~~N~~a~~~y~k~Gf~~~~~~ 159 (177)
T 2r7h_A 108 HSGLGRAL-LAEVVHDVRLTGGRLLFAETS---------GIRKYAPTRRFYERAGFSAEAVL 159 (177)
T ss_dssp TTTHHHHH-HHHHHHHHHHTTCCEEEEEEE---------CSGGGHHHHHHHHHTTCEEEEEE
T ss_pred CCCHHHHH-HHHHHHHHHhcCCCEEEEEec---------cccccHHHHHHHHHcCCEecccc
Confidence 34455544 456788889999999999882 12335578898999999877654
No 148
>3a11_A Translation initiation factor EIF-2B, delta subun; isomerase, hexamer, rossmann fold; 2.50A {Thermococcus kodakaraensis} PDB: 3a9c_A* 3vm6_A*
Probab=30.69 E-value=74 Score=24.35 Aligned_cols=51 Identities=24% Similarity=0.287 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHcCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEEEEEecC
Q 043606 26 LAAQDVSQRCKERGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVT 83 (101)
Q Consensus 26 ~a~~~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~~I~D~T 83 (101)
.+++.++..|.+.|.. ++|.+--+ .=...||.+| +.|.+.|+.++.|.|..
T Consensus 152 ~tvl~~l~~A~~~gk~-~~V~v~Et-----RP~~qGrltA-~eL~~~GI~vtlI~Dsa 202 (338)
T 3a11_A 152 KAAISVMKTAWEQGKD-IKVIVTET-----RPKWQGKITA-KELASYGIPVIYVVDSA 202 (338)
T ss_dssp HHHHHHHHHHHHTTCC-CEEEEECC-----TTTTHHHHHH-HHHHHTTCCEEEECGGG
T ss_pred HHHHHHHHHHHHCCCe-EEEEEeCC-----CCchhhHHHH-HHHHhCCCCEEEEehHH
Confidence 3456677788887765 66666321 2234577776 66999999999999954
No 149
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=30.69 E-value=63 Score=24.87 Aligned_cols=56 Identities=14% Similarity=0.272 Sum_probs=32.4
Q ss_pred CcHHHHHHHHHHHHHHHHHc-CCcEEEEEEeecCCCcccCCCC-ChHHHHHHHHhCCCeEEEEEecCC
Q 043606 19 SSPYAAMLAAQDVSQRCKER-GITALHIKLRATGGNKTKTPGP-GAQSALRALARSGMKIGRIEDVTP 84 (101)
Q Consensus 19 ~t~~Aa~~a~~~~~~~~~~~-gi~~v~V~lrg~~g~~~kG~G~-gr~~~lr~l~~~gl~I~~I~D~Tp 84 (101)
.|.|....+++.+++..... .++--.|-| .|+|. |.. +.+.|...|.+|+ +.|.++
T Consensus 149 aTg~GV~~~~~~~~~~~~G~~~L~GktV~V--------~G~G~VG~~-~A~~L~~~GakVv-v~D~~~ 206 (364)
T 1leh_A 149 VTAYGVYRGMKAAAKEAFGSDSLEGLAVSV--------QGLGNVAKA-LCKKLNTEGAKLV-VTDVNK 206 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHSSCCCTTCEEEE--------ECCSHHHHH-HHHHHHHTTCEEE-EECSCH
T ss_pred chhhHHHHHHHHHHHhhccccCCCcCEEEE--------ECchHHHHH-HHHHHHHCCCEEE-EEcCCH
Confidence 34454444444444433111 245556777 56664 444 4466888999988 989653
No 150
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=30.14 E-value=59 Score=22.85 Aligned_cols=51 Identities=12% Similarity=0.180 Sum_probs=30.4
Q ss_pred HHHHHHHHHcCCcEEEEEEeecCCCcccCCCCC---hHHHHHHHHhCCCeEEEEE
Q 043606 29 QDVSQRCKERGITALHIKLRATGGNKTKTPGPG---AQSALRALARSGMKIGRIE 80 (101)
Q Consensus 29 ~~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~g---r~~~lr~l~~~gl~I~~I~ 80 (101)
+.+++.+.++|+..|++.+... ..+..-.... .+..-+.|...||+|.++.
T Consensus 33 ~~~l~~~~~~G~~~iEl~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~ 86 (295)
T 3cqj_A 33 LERLQLAKTLGFDFVEMSVDET-DERLSRLDWSREQRLALVNAIVETGVRVPSMC 86 (295)
T ss_dssp HHHHHHHHHTTCSEEEEECCSS-HHHHGGGGCCHHHHHHHHHHHHHHCCEEEEEE
T ss_pred HHHHHHHHhcCCCEEEEecCCc-ccccCcccCCHHHHHHHHHHHHHcCCeEEEEe
Confidence 4567888999999999987210 0000000111 2234455677899999885
No 151
>1yx0_A Hypothetical protein YSNE; NESG, GFT structral genomics, SR220, structural genomics, PSI, protein structure initiative; NMR {Bacillus subtilis subsp} SCOP: d.108.1.1
Probab=29.45 E-value=67 Score=19.88 Aligned_cols=46 Identities=17% Similarity=0.249 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHHHHHHcCCcEEEEEEeecCCCcccCCCCC--hHHHHHHHHhCCCeEEE
Q 043606 21 PYAAMLAAQDVSQRCKERGITALHIKLRATGGNKTKTPGPG--AQSALRALARSGMKIGR 78 (101)
Q Consensus 21 ~~Aa~~a~~~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~g--r~~~lr~l~~~gl~I~~ 78 (101)
=++..+. +.+.+.+.+.|+..|.+.+ ... ...+++.+.+.|+....
T Consensus 86 Gig~~ll-~~~~~~~~~~g~~~i~l~~-----------~~~~~N~~a~~~y~k~Gf~~~~ 133 (159)
T 1yx0_A 86 GVAKQVL-QHIIEEAEKRGYERLSLET-----------GSMASFEPARKLYESFGFQYCE 133 (159)
T ss_dssp CHHHHHH-HHHHHHHHHHTCSCEECCC-----------SSCTTHHHHHHHHHTTSEEECC
T ss_pred CHHHHHH-HHHHHHHHhCCCcEEEEEe-----------cccccCchHHHHHHHcCCEEcc
Confidence 3444443 5677888888999888876 333 56788888989987653
No 152
>3jvn_A Acetyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 2.61A {Vibrio fischeri}
Probab=29.31 E-value=19 Score=22.08 Aligned_cols=49 Identities=16% Similarity=0.230 Sum_probs=22.9
Q ss_pred CCcHHHHHHHHHHHHHHHHHcCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEEE
Q 043606 18 ESSPYAAMLAAQDVSQRCKERGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGR 78 (101)
Q Consensus 18 k~t~~Aa~~a~~~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~~ 78 (101)
++.=++..+. +.+.+.+.+.|+..|.+.+. .....+++...+.|++...
T Consensus 101 rg~Gig~~ll-~~~~~~a~~~g~~~i~l~v~-----------~~n~~a~~~y~k~GF~~~~ 149 (166)
T 3jvn_A 101 RREGVAEQLM-MRIEQELKDYGVKEIFVEVW-----------DFNKGALEFYNKQGLNEHI 149 (166)
T ss_dssp CSSSHHHHHH-HHHHHHHHTTTCSEEEECCC-------------CCBC-------------
T ss_pred hccCHHHHHH-HHHHHHHHHcCCCEEEEEEe-----------cCCHHHHHHHHHcCCeEHH
Confidence 3444555544 56788899999999888872 2223466777777876653
No 153
>2bz1_A GTP cyclohydrolase II; riboflavin biosynthesis, catalytic zinc, magnesium; 1.54A {Escherichia coli} SCOP: c.144.1.1 PDB: 2bz0_A
Probab=29.29 E-value=70 Score=22.84 Aligned_cols=45 Identities=18% Similarity=0.299 Sum_probs=27.6
Q ss_pred HHHHHHHcCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEEEEEe--cCCCCCC
Q 043606 31 VSQRCKERGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIED--VTPIPTD 88 (101)
Q Consensus 31 ~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~~I~D--~TpiphN 88 (101)
.+|-++++|++.+.+.= + +| + =+.+|...||+|+.-.. ..+-|||
T Consensus 133 gAqIL~dLGV~~irLLT--------n--np-~--K~~~L~g~GleVve~v~~~~~~~~~n 179 (196)
T 2bz1_A 133 CADMFKLLGVNEVRLLT--------N--NP-K--KVEILTEAGINIVERVPLIVGRNPNN 179 (196)
T ss_dssp HHHHHHHTTCCSEEEEC--------S--CH-H--HHHHHHHTTCCEEEEECCCC------
T ss_pred HHHHHHHcCCCcEEccC--------C--CC-c--cccccccCCeEEEEEEccCCCCCccc
Confidence 46677899999987654 2 34 2 25678889999986653 3555666
No 154
>3ugs_B Undecaprenyl pyrophosphate synthase; niaid, csgid, structural genomics, center for structural GEN infectious diseases; HET: FFT; 2.46A {Campylobacter jejuni} SCOP: c.101.1.0
Probab=28.89 E-value=1.5e+02 Score=21.74 Aligned_cols=61 Identities=16% Similarity=0.320 Sum_probs=39.9
Q ss_pred HHHHHHHHHHHHHHHcCCcEEEEEEeecCCCcccCCCCChHH-HH------------HHHHhCCCeEEEEEecCCCCC
Q 043606 23 AAMLAAQDVSQRCKERGITALHIKLRATGGNKTKTPGPGAQS-AL------------RALARSGMKIGRIEDVTPIPT 87 (101)
Q Consensus 23 Aa~~a~~~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~gr~~-~l------------r~l~~~gl~I~~I~D~Tpiph 87 (101)
+...+...+++.|.++||+.|.|+.--++ ||.. |-.|. +| ..|...|+.|..|-|...+|.
T Consensus 34 ~G~~~~~~i~~~c~~lGI~~lTlYaFStE-Nw~R---p~~EV~~Lm~L~~~~l~~~~~~l~~~~vrvr~iGd~~~Lp~ 107 (225)
T 3ugs_B 34 QGVKTMQKLMEVCMEENISNLSLFAFSTE-NWKR---PKDEIDFIFELLDRCLDEALEKFEKNNVRLRAIGDLSRLED 107 (225)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEEEEESG-GGGS---CHHHHHHHHHHHHHHHHHHHHHSTTTTEEEEEESCGGGSCH
T ss_pred HHHHHHHHHHHHHHHcCCCEEEEEEEccc-ccCC---CHHHHHHHHHHHHHHHHHHHHHHHHCCcEEEEEeChHhCCH
Confidence 44556677899999999999999986541 2222 11111 11 112346899999999988874
No 155
>2fiw_A GCN5-related N-acetyltransferase:aminotransferase II; alpha-beta-alpha sandwich, GCN4-related acetyltransferase, S genomics, PSI; HET: ACO; 2.35A {Rhodopseudomonas palustris} SCOP: d.108.1.1
Probab=28.73 E-value=1e+02 Score=18.71 Aligned_cols=45 Identities=16% Similarity=0.216 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHHHHHHHcCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEEEEE
Q 043606 21 PYAAMLAAQDVSQRCKERGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIE 80 (101)
Q Consensus 21 ~~Aa~~a~~~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~~I~ 80 (101)
=++..+. +.+.+.+.+.|+..+.+.. + ..+++...+.|++...-.
T Consensus 98 Gig~~ll-~~~~~~~~~~g~~~i~~~~-----------n---~~a~~~y~k~GF~~~~~~ 142 (172)
T 2fiw_A 98 DVGTTLI-DALEKLAGARGALILTVDA-----------S---DNAAEFFAKRGYVAKQRN 142 (172)
T ss_dssp SHHHHHH-HHHHHHHHTTTCSEEEEEE-----------C---TTTHHHHHTTTCEEEEEE
T ss_pred CHHHHHH-HHHHHHHHhcCCcEEEEEe-----------C---HHHHHHHHHcCCEEecce
Confidence 3454443 5678888889999988877 2 257788889999886554
No 156
>2z0f_A Putative phosphoglucomutase; isomerase, magnesium, metal-binding, structural genomics; 2.52A {Thermus thermophilus}
Probab=28.51 E-value=47 Score=26.42 Aligned_cols=74 Identities=19% Similarity=0.258 Sum_probs=47.1
Q ss_pred ccceeecc--CCCCcHHHHHHHHHHHHHHHHHcCC-cEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEEEEEe--c
Q 043606 8 GGMKVKAD--RDESSPYAAMLAAQDVSQRCKERGI-TALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIED--V 82 (101)
Q Consensus 8 G~~gfKg~--r~k~t~~Aa~~a~~~~~~~~~~~gi-~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~~I~D--~ 82 (101)
|.-|..|. ...-|++-+..+++.+++.+.+.+. ..|.|---.+ ..-..-.+.++.+|..+|+++....| .
T Consensus 27 GT~GiRG~~~~~~lt~~~v~~i~~a~~~~l~~~~~~~~VvIG~D~R-----~~S~~~~~~~~~gl~a~Gi~V~~~~~~G~ 101 (524)
T 2z0f_A 27 GTSGHRGSSLKATFTEAHVLAIAQAIAELRPSFGATGPLFLAKDTH-----ALSEPAWATALSVFAAHGIEVRVEADGDY 101 (524)
T ss_dssp ETTEEEECGGGTSSCHHHHHHHHHHHHHHTTTTTCCSCEEEEECSC-----TTHHHHHHHHHHHHHHTTCCEEEESSSSC
T ss_pred cCccccCCcccCCCCHHHHHHHHHHHHHHHHHhCCCCeEEEEeCCC-----cchHHHHHHHHHHHHHCCCEEEEeCCCCc
Confidence 44455652 2367999999999988888776654 2344443211 01122346678889999999998876 5
Q ss_pred CCCC
Q 043606 83 TPIP 86 (101)
Q Consensus 83 Tpip 86 (101)
.|.|
T Consensus 102 ~pTP 105 (524)
T 2z0f_A 102 TPTP 105 (524)
T ss_dssp CCHH
T ss_pred cCcH
Confidence 5544
No 157
>2vi7_A Acetyltransferase PA1377; GNAT, GCN5 family, N-acetyltransferase, hypothetical protein; 2.25A {Pseudomonas aeruginosa}
Probab=28.04 E-value=1.1e+02 Score=19.11 Aligned_cols=50 Identities=8% Similarity=0.084 Sum_probs=36.0
Q ss_pred CcHHHHHHHHHHHHHHHHHc-CCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEEEEE
Q 043606 19 SSPYAAMLAAQDVSQRCKER-GITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIE 80 (101)
Q Consensus 19 ~t~~Aa~~a~~~~~~~~~~~-gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~~I~ 80 (101)
+.=++.++. +.+.+.+.+. |+..|.+.+ -.....|++...+.|+......
T Consensus 99 g~Gig~~ll-~~~~~~a~~~~~~~~i~l~v-----------~~~N~~a~~~Yek~GF~~~g~~ 149 (177)
T 2vi7_A 99 GKGVGSRLL-GELLDIADNWMNLRRVELTV-----------YTDNAPALALYRKFGFETEGEM 149 (177)
T ss_dssp TTTHHHHHH-HHHHHHHHHTSCCSEEEEEE-----------ETTCHHHHHHHHHTTCEEEEEE
T ss_pred CCCHHHHHH-HHHHHHHHhcCCeEEEEEEE-----------ECCCHHHHHHHHHCCCEEEeee
Confidence 334555544 5677888875 699999998 3335678999999999877654
No 158
>4abl_A Poly [ADP-ribose] polymerase 14; transferase, PARP14; 1.15A {Homo sapiens} PDB: 4abk_A
Probab=27.95 E-value=40 Score=23.55 Aligned_cols=37 Identities=14% Similarity=0.206 Sum_probs=28.4
Q ss_pred eeeccceeeccCCCCcHHHHHHHHHHHHHHHHHc---CCcEEEEEE
Q 043606 5 RITGGMKVKADRDESSPYAAMLAAQDVSQRCKER---GITALHIKL 47 (101)
Q Consensus 5 ~SsG~~gfKg~r~k~t~~Aa~~a~~~~~~~~~~~---gi~~v~V~l 47 (101)
.|+|..||.... ||+.+.+.+.+.+.+. .++.|.+.+
T Consensus 126 IstG~~g~p~~~------aa~i~~~~v~~fl~~~~~~~l~~V~fv~ 165 (183)
T 4abl_A 126 IGTGNAKQHPDK------VAEAIIDAIEDFVQKGSAQSVKKVKVVI 165 (183)
T ss_dssp TTSSTTCCCHHH------HHHHHHHHHHHHHHTTCCSSCCEEEEEE
T ss_pred ccCCCCCcCHHH------HHHHHHHHHHHHHHhcCCCCCCEEEEEE
Confidence 478888888766 8888888777777764 577888888
No 159
>2fl4_A Spermine/spermidine acetyltransferase; structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Enterococcus faecalis} SCOP: d.108.1.1
Probab=27.45 E-value=1.1e+02 Score=18.78 Aligned_cols=50 Identities=16% Similarity=0.119 Sum_probs=35.7
Q ss_pred cHHHHHHHHHHHHHHHHH-cCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEEEEEe
Q 043606 20 SPYAAMLAAQDVSQRCKE-RGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIED 81 (101)
Q Consensus 20 t~~Aa~~a~~~~~~~~~~-~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~~I~D 81 (101)
-=|+.++. +.+.+.+.+ .|+..|.+.+ -.....|++...+.|+......+
T Consensus 85 ~Gig~~ll-~~~~~~~~~~~~~~~i~l~v-----------~~~N~~a~~~Y~k~GF~~~g~~~ 135 (149)
T 2fl4_A 85 QGYGKAAC-RLLMLKLIEKYQTNKLYLSV-----------YDTNSSAIRLYQQLGFVFNGELD 135 (149)
T ss_dssp SSHHHHHH-HHHHHHHHHHSSCSEEEEEE-----------CTTCHHHHHHHHHTTCEEEEEEC
T ss_pred CCHHHHHH-HHHHHHHHHhCCCCEEEEEE-----------ECCCHHHHHHHHHCCCEEecccc
Confidence 33555444 557777776 4799999998 34456789989999998776554
No 160
>2yfq_A Padgh, NAD-GDH, NAD-specific glutamate dehydrogenase; oxidoreductase; 2.94A {Peptoniphilus asaccharolyticus}
Probab=27.03 E-value=43 Score=26.55 Aligned_cols=55 Identities=16% Similarity=0.320 Sum_probs=37.5
Q ss_pred CCcHHHHHHHHHHHHHHHHHcC--CcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEEEEEecC
Q 043606 18 ESSPYAAMLAAQDVSQRCKERG--ITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVT 83 (101)
Q Consensus 18 k~t~~Aa~~a~~~~~~~~~~~g--i~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~~I~D~T 83 (101)
..|-|.....++.+++. +| ++...|.| .|+|-=-..+.+.|.+.|.+|+.|.|..
T Consensus 189 ~aTg~Gv~~~~~~~~~~---~g~~l~g~~vaV--------qG~GnVG~~~a~~L~~~GakvVavsD~~ 245 (421)
T 2yfq_A 189 EATGFGVAVVVRESAKR---FGIKMEDAKIAV--------QGFGNVGTFTVKNIERQGGKVCAIAEWD 245 (421)
T ss_dssp THHHHHHHHHHHHHHHH---TTCCGGGSCEEE--------ECCSHHHHHHHHHHHHTTCCEEECCBCC
T ss_pred cchHHHHHHHHHHHHHh---cCCCccCCEEEE--------ECcCHHHHHHHHHHHHCCCEEEEEEecC
Confidence 45556655555544443 55 44667888 6788533345577888999999999998
No 161
>3n70_A Transport activator; sigma-54, ntpase, PSI, MCSG, structural genomics, center for structural genomics; 2.80A {Escherichia coli}
Probab=26.67 E-value=91 Score=19.69 Aligned_cols=32 Identities=25% Similarity=0.350 Sum_probs=22.4
Q ss_pred HHHHcCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhC
Q 043606 34 RCKERGITALHIKLRATGGNKTKTPGPGAQSALRALARS 72 (101)
Q Consensus 34 ~~~~~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~ 72 (101)
.+....-....|.|-|+ +|.|+..+.++|...
T Consensus 16 ~~~~~a~~~~~vll~G~-------~GtGKt~lA~~i~~~ 47 (145)
T 3n70_A 16 RLQQLSETDIAVWLYGA-------PGTGRMTGARYLHQF 47 (145)
T ss_dssp HHHHHTTCCSCEEEESS-------TTSSHHHHHHHHHHS
T ss_pred HHHHHhCCCCCEEEECC-------CCCCHHHHHHHHHHh
Confidence 33333344456788665 899999999999864
No 162
>3na5_A Phosphoglucomutase; isomerase, metal binding; HET: BTB; 1.70A {Salmonella enterica subsp} PDB: 3olp_A 2fuv_A*
Probab=26.59 E-value=2.1e+02 Score=23.23 Aligned_cols=72 Identities=17% Similarity=0.154 Sum_probs=46.0
Q ss_pred ccceeeccC--CCCcHHHHHHHHHHHHHHHHHcCC-cEEEEEEeecCCCcccCCC-CChHHHHHHHHhCCCeEEEEEecC
Q 043606 8 GGMKVKADR--DESSPYAAMLAAQDVSQRCKERGI-TALHIKLRATGGNKTKTPG-PGAQSALRALARSGMKIGRIEDVT 83 (101)
Q Consensus 8 G~~gfKg~r--~k~t~~Aa~~a~~~~~~~~~~~gi-~~v~V~lrg~~g~~~kG~G-~gr~~~lr~l~~~gl~I~~I~D~T 83 (101)
|.-|..|.- ..-|++-+..+++.+++.+.+.+. ..|.|=--. +-.+ +-.+.++..|..+|++|....|.-
T Consensus 67 GT~GiRG~~~~~~ln~~~v~~i~~A~a~~l~~~~~~~~VvVG~D~------R~~S~~~~~~a~~~L~a~Gi~V~~~~d~g 140 (570)
T 3na5_A 67 GTSGHRGSAGRHSFNEPHILAIAQAIAEERAKNGITGPCYVGKDT------HALSEPAFISVLEVLAANGVDVIVQENNG 140 (570)
T ss_dssp BTTBEEECGGGTSSSHHHHHHHHHHHHHHHHHTTCCSCEEEEECS------STTHHHHHHHHHHHHHHTTCCEEEEGGGC
T ss_pred cCCCceeecCCCCCCHHHHHHHHHHHHHHHHHhCCCCeEEEEeCC------CcccHHHHHHHHHHHHHCCCEEEEeCCCC
Confidence 344455431 268999999999999998887764 345444321 1111 124567788999999999776443
Q ss_pred CC
Q 043606 84 PI 85 (101)
Q Consensus 84 pi 85 (101)
.+
T Consensus 141 ~~ 142 (570)
T 3na5_A 141 FT 142 (570)
T ss_dssp CC
T ss_pred cc
Confidence 33
No 163
>1aq0_A 1,3-1,4-beta-glucanase; hydrolase, glycosidase, glycoprotein, glycosylated protein; HET: NAG; 2.00A {Hordeum vulgare} SCOP: c.1.8.3 PDB: 1ghr_A
Probab=26.49 E-value=65 Score=24.34 Aligned_cols=36 Identities=28% Similarity=0.474 Sum_probs=26.0
Q ss_pred HHHHHHHHcCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEEE
Q 043606 30 DVSQRCKERGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGR 78 (101)
Q Consensus 30 ~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~~ 78 (101)
.+++.++..|++.|+++= .. ..+|++|..+||++..
T Consensus 17 ~vv~llk~~~i~~VRlY~----------~d---~~vL~A~~~tgi~v~l 52 (306)
T 1aq0_A 17 TVVSMFKSNGIKSMRLYA----------PN---QAALQAVGGTGINVVV 52 (306)
T ss_dssp HHHHHHHHHTCCEEEESS----------CC---HHHHHHHTTSCCEEEE
T ss_pred HHHHHHHhcCCCEEEEcC----------CC---HHHHHHHHhcCCEEEE
Confidence 345566788999766652 22 5889999999998864
No 164
>2xd7_A Core histone macro-H2A.2; chromosomal protein, nucleosome core, chromatin regulator, nucleus, DNA-binding protein, phosphoprotein; 2.09A {Homo sapiens}
Probab=26.44 E-value=63 Score=22.52 Aligned_cols=38 Identities=13% Similarity=0.135 Sum_probs=28.3
Q ss_pred eeeeccceeeccCCCCcHHHHHHHHHHHHHHHHHc---CCcEEEEEE
Q 043606 4 ERITGGMKVKADRDESSPYAAMLAAQDVSQRCKER---GITALHIKL 47 (101)
Q Consensus 4 ~~SsG~~gfKg~r~k~t~~Aa~~a~~~~~~~~~~~---gi~~v~V~l 47 (101)
+.|+|..||.... ||+.+.+.+.+.+.+. .++.|++.+
T Consensus 137 ~IstG~~g~p~~~------aa~i~~~~v~~~l~~~~~~~l~~V~fv~ 177 (193)
T 2xd7_A 137 PFPSGRNCFPKQT------AAQVTLKAISAHFDDSSASSLKNVYFLL 177 (193)
T ss_dssp CCCCSTTCCCHHH------HHHHHHHHHHHHHHHCSSCCCCEEEEEE
T ss_pred cccCCCCCCCHHH------HHHHHHHHHHHHHHhcCCCCCCEEEEEE
Confidence 3478888888766 8888877777777653 477888877
No 165
>1mp9_A Tata-binding protein; transcription regulation, DNA-binding protein, transcription factor, DNA binding protein; 2.00A {Sulfolobus acidocaldarius} SCOP: d.129.1.1 d.129.1.1
Probab=25.43 E-value=79 Score=22.53 Aligned_cols=36 Identities=14% Similarity=0.102 Sum_probs=30.9
Q ss_pred eeeeeccceeeccCCCCcHHHHHHHHHHHHHHHHHcCCc
Q 043606 3 LERITGGMKVKADRDESSPYAAMLAAQDVSQRCKERGIT 41 (101)
Q Consensus 3 ~~~SsG~~gfKg~r~k~t~~Aa~~a~~~~~~~~~~~gi~ 41 (101)
+..++|-+-..|++ ++-.++.|.+.+...+.++|+.
T Consensus 153 lIF~SGKiviTGak---s~~~~~~A~~~i~~~L~~~~~~ 188 (198)
T 1mp9_A 153 LIFSSGKMVITGAK---REDEVHKAVKKIFDKLVELDCV 188 (198)
T ss_dssp EECTTSEEEEEEES---SHHHHHHHHHHHHHHHHHTTCE
T ss_pred EEeCCCEEEEEecC---CHHHHHHHHHHHHHHHHHhCCC
Confidence 45689999999999 7778888999999999998864
No 166
>2aj6_A Hypothetical protein MW0638; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL; 1.63A {Staphylococcus aureus subsp} SCOP: d.108.1.1
Probab=25.18 E-value=28 Score=21.78 Aligned_cols=46 Identities=7% Similarity=0.055 Sum_probs=18.1
Q ss_pred HHHHHHHHHHHHHHHHHcCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEEE
Q 043606 21 PYAAMLAAQDVSQRCKERGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGR 78 (101)
Q Consensus 21 ~~Aa~~a~~~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~~ 78 (101)
-++.. +.+.+.+.+.+.|+..|.+.+. ..-..+++.+.+.|++...
T Consensus 106 Gig~~-ll~~~~~~~~~~g~~~i~l~~~-----------~~N~~a~~~y~k~GF~~~~ 151 (159)
T 2aj6_A 106 GIATQ-LKIALEKWAKTMNAKRISNTIH-----------KNNLPMISLNKDLGYQVSH 151 (159)
T ss_dssp SHHHH-HHHHHHHHHHHTTCSCCCCC--------------------------------
T ss_pred CHHHH-HHHHHHHHHHHcCCcEEEEEec-----------cCCHHHHHHHHHCCCEEee
Confidence 35544 4456788888899998887772 2234577777778877654
No 167
>2cyg_A Beta-1, 3-glucananse; endo-beta-1,3-glucanase, (beta-alpha)8-TIM-barrel, B-cell epitopes, allergen, banana, hydrolase; 1.45A {Musa acuminata} SCOP: c.1.8.3
Probab=25.16 E-value=83 Score=23.76 Aligned_cols=35 Identities=29% Similarity=0.354 Sum_probs=26.0
Q ss_pred HHHHHHHcCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEEE
Q 043606 31 VSQRCKERGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGR 78 (101)
Q Consensus 31 ~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~~ 78 (101)
+++.++.+|++.|+++= .. ..+|++|..+||+|..
T Consensus 18 vv~llk~~~i~~vRlY~----------~d---~~vl~A~~~tgi~v~l 52 (312)
T 2cyg_A 18 VVSLYKSNNIARMRLYD----------PN---QAALQALRNSNIQVLL 52 (312)
T ss_dssp HHHHHHHTTCCEEEESS----------CC---HHHHHHHTTSCCEEEE
T ss_pred HHHHHHhcCCCEEEEcC----------CC---HHHHHHHHhcCCEEEE
Confidence 35667788999877652 22 5899999999988863
No 168
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=24.87 E-value=79 Score=20.46 Aligned_cols=38 Identities=11% Similarity=0.085 Sum_probs=27.2
Q ss_pred HHHHHHHHHcCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEE
Q 043606 29 QDVSQRCKERGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIG 77 (101)
Q Consensus 29 ~~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~ 77 (101)
..+++.|.++|++. |.+. .|.-.+-+++..+..|+.++
T Consensus 72 ~~~v~e~~~~g~k~--v~~~---------~G~~~~e~~~~a~~~Girvv 109 (122)
T 3ff4_A 72 LSEYNYILSLKPKR--VIFN---------PGTENEELEEILSENGIEPV 109 (122)
T ss_dssp GGGHHHHHHHCCSE--EEEC---------TTCCCHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHhcCCCE--EEEC---------CCCChHHHHHHHHHcCCeEE
Confidence 34678888999995 3452 24445677788888999876
No 169
>3i3g_A N-acetyltransferase; malaria, structural genomics, structural genomics consortium, SGC,; 1.86A {Trypanosoma brucei} PDB: 3fb3_A
Probab=24.77 E-value=1.2e+02 Score=18.23 Aligned_cols=47 Identities=11% Similarity=0.188 Sum_probs=32.6
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEEEEE
Q 043606 19 SSPYAAMLAAQDVSQRCKERGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIE 80 (101)
Q Consensus 19 ~t~~Aa~~a~~~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~~I~ 80 (101)
+-=++.++. +.+.+.+.+.|+..+.+.+. .. .++...+.|++.....
T Consensus 110 g~Gig~~Ll-~~~~~~a~~~g~~~i~l~~~-----------~~---n~~~y~k~GF~~~~~~ 156 (161)
T 3i3g_A 110 GAGLGKALI-MDLCEISRSKGCYKVILDSS-----------EK---SLPFYEKLGFRAHERQ 156 (161)
T ss_dssp TTTHHHHHH-HHHHHHHHHTTCSEEEEEEC-----------TT---THHHHHHTTCEEEEEE
T ss_pred ccCHHHHHH-HHHHHHHHHcCCcEEEEEec-----------cc---chhHHHhcCCeecCce
Confidence 344555544 56888899999999998882 11 1577788898877643
No 170
>4i1u_A Dephospho-COA kinase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.05A {Burkholderia vietnamiensis} PDB: 4i1v_A*
Probab=24.67 E-value=67 Score=22.81 Aligned_cols=23 Identities=17% Similarity=0.235 Sum_probs=20.4
Q ss_pred cCCCCChHHHHHHHHhCCCeEEE
Q 043606 56 KTPGPGAQSALRALARSGMKIGR 78 (101)
Q Consensus 56 kG~G~gr~~~lr~l~~~gl~I~~ 78 (101)
-|+|.|+.++-+.|...|+.+..
T Consensus 16 GgigsGKStv~~~l~~~g~~vid 38 (210)
T 4i1u_A 16 GGIGSGKTTVADLFAARGASLVD 38 (210)
T ss_dssp CCTTSCHHHHHHHHHHTTCEEEE
T ss_pred CCCCCCHHHHHHHHHHCCCcEEE
Confidence 47999999999999999988875
No 171
>3u0h_A Xylose isomerase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel; 2.30A {Alicyclobacillus acidocaldarius subsp}
Probab=24.55 E-value=18 Score=25.08 Aligned_cols=49 Identities=10% Similarity=0.161 Sum_probs=29.1
Q ss_pred HHHHHHHHHcCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEEEEE
Q 043606 29 QDVSQRCKERGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIE 80 (101)
Q Consensus 29 ~~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~~I~ 80 (101)
+.+++.+.++|+..|++...... .+ -.....+.+.+.|...||+|..+.
T Consensus 19 ~~~l~~~~~~G~~~vEl~~~~~~-~~--~~~~~~~~~~~~l~~~gl~~~~~~ 67 (281)
T 3u0h_A 19 VLYLDLARETGYRYVDVPFHWLE-AE--AERHGDAAVEAMFQRRGLVLANLG 67 (281)
T ss_dssp HHHHHHHHHTTCSEECCCHHHHH-HH--HHHHCHHHHHHHHHTTTCEECCEE
T ss_pred HHHHHHHHHcCCCEEEecHHHHH-HH--hcccCHHHHHHHHHHcCCceEEec
Confidence 45677788889998888772100 00 001224445566677788887765
No 172
>2zqe_A MUTS2 protein; alpha/beta, ATP-binding, DNA-binding, nucleotide-binding, DN protein; 1.70A {Thermus thermophilus}
Probab=24.48 E-value=1.2e+02 Score=18.24 Aligned_cols=56 Identities=20% Similarity=0.303 Sum_probs=38.2
Q ss_pred cHHHHHHHHHHHHHHHHHcCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEEEEEecC
Q 043606 20 SPYAAMLAAQDVSQRCKERGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVT 83 (101)
Q Consensus 20 t~~Aa~~a~~~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~~I~D~T 83 (101)
|..-|..+.+..++.|...|+..|.|.= | +|.|.=|..+-..|.+. -.|.+..+-.
T Consensus 13 ~~~eA~~~l~~fl~~a~~~g~~~v~IIH-G------kG~GvLr~~V~~~L~~~-~~V~~f~~a~ 68 (83)
T 2zqe_A 13 TVAEALLEVDQALEEARALGLSTLRLLH-G------KGTGALRQAIREALRRD-KRVESFADAP 68 (83)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCSEEEEEC-C------STTSHHHHHHHHHHHHC-TTEEEEEECC
T ss_pred CHHHHHHHHHHHHHHHHHCCCCEEEEEE-C------CCchHHHHHHHHHHhcC-CceeEEEEcC
Confidence 4566777778889999999999988874 2 33333366666667765 4666666543
No 173
>2hvw_A Deoxycytidylate deaminase; 3-layer (alpha-beta)-sandwich, protein-liand complex, hydrolase; HET: DCP DDN; 1.67A {Streptococcus mutans} PDB: 2hvv_A*
Probab=24.42 E-value=1.1e+02 Score=21.47 Aligned_cols=38 Identities=5% Similarity=0.044 Sum_probs=25.1
Q ss_pred HHHHHcCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEEEEE
Q 043606 33 QRCKERGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIE 80 (101)
Q Consensus 33 ~~~~~~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~~I~ 80 (101)
+.+.+.||+.|.+-.. .+....+++.|..+|++|..+.
T Consensus 138 ~aIi~agI~rVVy~~~----------~~~~~~~~~~L~~aGIeV~~~~ 175 (184)
T 2hvw_A 138 KALLQAGVKKITYNTA----------YRIHPFAIELMTQKEVEYVQHD 175 (184)
T ss_dssp HHHHHHTEEEEEEEEC----------CSCCHHHHHHHHHHTCEEEECC
T ss_pred HHHHHHCCCeEEEEec----------CCCCHHHHHHHHHCCCEEEEec
Confidence 3445678888776652 2222345888999999987653
No 174
>2r4q_A Phosphotransferase system (PTS) fructose-specific iiabc component; fructose specific IIB subunit, PF structural genomics, PSI-2; HET: MSE; 1.60A {Bacillus subtilis subsp} SCOP: c.44.2.2
Probab=24.21 E-value=99 Score=19.97 Aligned_cols=26 Identities=19% Similarity=0.515 Sum_probs=20.6
Q ss_pred HHHHHHHHHHHHHHcCCcEEEEEEeec
Q 043606 24 AMLAAQDVSQRCKERGITALHIKLRAT 50 (101)
Q Consensus 24 a~~a~~~~~~~~~~~gi~~v~V~lrg~ 50 (101)
..+|+|.+-+.++++|+. +.|..+|.
T Consensus 18 TymAaeaL~~aA~~~G~~-ikVEtqGs 43 (106)
T 2r4q_A 18 TFMAADALKEKAKELGVE-IKVETNGS 43 (106)
T ss_dssp HHHHHHHHHHHHHHHTCC-EEEEEEET
T ss_pred HHHHHHHHHHHHHHCCCe-EEEEecCC
Confidence 456778888888999998 88888764
No 175
>2bma_A Glutamate dehydrogenase (NADP+); malaria, drug design, analysis, oligomer organization, oxidoreductase; 2.7A {Plasmodium falciparum}
Probab=23.98 E-value=69 Score=25.98 Aligned_cols=59 Identities=14% Similarity=0.139 Sum_probs=38.1
Q ss_pred CCcHHHHHHHHHHHHHHHHHcCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEEEEEecCCC
Q 043606 18 ESSPYAAMLAAQDVSQRCKERGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPI 85 (101)
Q Consensus 18 k~t~~Aa~~a~~~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~~I~D~Tpi 85 (101)
..|-|....+++.+++.. ...++-..|.| .|+|.=-..+.+.|.+.|-+|+.|.|.+-.
T Consensus 229 ~aTg~Gv~~~~~~~l~~~-G~~l~g~~vaV--------qG~GnVG~~~a~~L~~~GakvVavsD~~G~ 287 (470)
T 2bma_A 229 EATGYGLVYFVLEVLKSL-NIPVEKQTAVV--------SGSGNVALYCVQKLLHLNVKVLTLSDSNGY 287 (470)
T ss_dssp THHHHHHHHHHHHHHHTT-TCCGGGCEEEE--------ECSSHHHHHHHHHHHHTTCEECEEEETTEE
T ss_pred ccchHHHHHHHHHHHHhc-cCCcCCCEEEE--------ECCcHHHHHHHHHHHHCCCEEEEEEeCCce
Confidence 455565555555444333 23346678889 778853344557788899999999996533
No 176
>2r48_A Phosphotransferase system (PTS) mannose-specific iibca component; PTS system, fructose specific IIB PFAM02379, PSI-2, MCSG; 1.80A {Bacillus subtilis subsp} SCOP: c.44.2.2
Probab=23.80 E-value=98 Score=20.00 Aligned_cols=27 Identities=11% Similarity=0.393 Sum_probs=21.4
Q ss_pred HHHHHHHHHHHHHHHcCCcEEEEEEeec
Q 043606 23 AAMLAAQDVSQRCKERGITALHIKLRAT 50 (101)
Q Consensus 23 Aa~~a~~~~~~~~~~~gi~~v~V~lrg~ 50 (101)
...+|+|.+-+.++++|+. +.|..+|.
T Consensus 17 hTymAaeaL~~aA~~~G~~-ikVEtqGs 43 (106)
T 2r48_A 17 HTYMAAENLQKAADRLGVS-IKVETQGG 43 (106)
T ss_dssp HHHHHHHHHHHHHHHHTCE-EEEEEEET
T ss_pred HHHHHHHHHHHHHHHCCCe-EEEEecCC
Confidence 3566788888888999987 88888764
No 177
>3d3s_A L-2,4-diaminobutyric acid acetyltransferase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; HET: MSE; 1.87A {Bordetella parapertussis 12822}
Probab=23.47 E-value=56 Score=20.77 Aligned_cols=43 Identities=19% Similarity=0.274 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHHHHHHHcCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCe
Q 043606 21 PYAAMLAAQDVSQRCKERGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMK 75 (101)
Q Consensus 21 ~~Aa~~a~~~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~ 75 (101)
=++..+. +.+.+.+.+.|+..|.+.+ -.....+++...+.|++
T Consensus 110 Gig~~Ll-~~~~~~a~~~g~~~i~l~v-----------~~~N~~a~~~y~k~Gf~ 152 (189)
T 3d3s_A 110 RLGRAML-GHILERQECRHVRHLETTV-----------GPDNQASRRTFAGLAGE 152 (189)
T ss_dssp CHHHHHH-HHHHHSGGGTTCCEEEEEE-----------CTTCHHHHHHHHHHHHT
T ss_pred CHHHHHH-HHHHHHHHHCCCCEEEEEE-----------ecCcHHHHHHHHHcCCc
Confidence 3555444 5677888889999999998 33345677777777654
No 178
>2qho_B E3 ubiquitin-protein ligase EDD1; protein-protein complex, protein binding/ligase complex; 1.85A {Homo sapiens}
Probab=23.42 E-value=44 Score=19.37 Aligned_cols=19 Identities=21% Similarity=0.497 Sum_probs=16.4
Q ss_pred CCCChHHHHHHHHhCCCeE
Q 043606 58 PGPGAQSALRALARSGMKI 76 (101)
Q Consensus 58 ~G~gr~~~lr~l~~~gl~I 76 (101)
.|.-|+.++|-|++.++.+
T Consensus 21 qgksR~vIirELqrTnLdV 39 (53)
T 2qho_B 21 QGKSRSVIIRELQRTNLDV 39 (53)
T ss_dssp TTCCHHHHHHHHHHTTTCH
T ss_pred cCCcHHHHHHHHHHhCccH
Confidence 4788999999999988764
No 179
>1qtw_A Endonuclease IV; DNA repair enzyme, TIM barrel, trinuclear Zn cluster, hydrolase; 1.02A {Escherichia coli} SCOP: c.1.15.1 PDB: 1qum_A* 2nqh_A 2nqj_A* 2nq9_A*
Probab=23.25 E-value=32 Score=23.90 Aligned_cols=47 Identities=11% Similarity=-0.024 Sum_probs=26.6
Q ss_pred HHHHHHHHHcCCcEEEEEEeecCCCcc-cCCC-CChHHHHHHHHhCCCeE
Q 043606 29 QDVSQRCKERGITALHIKLRATGGNKT-KTPG-PGAQSALRALARSGMKI 76 (101)
Q Consensus 29 ~~~~~~~~~~gi~~v~V~lrg~~g~~~-kG~G-~gr~~~lr~l~~~gl~I 76 (101)
+.+++.+.++|+..|++....+.. +. ..+. ...+...+.|...||+|
T Consensus 15 ~~~l~~~~~~G~~~vEl~~~~~~~-~~~~~~~~~~~~~~~~~l~~~gl~~ 63 (285)
T 1qtw_A 15 ANAAIRAAEIDATAFALFTKNQRQ-WRAAPLTTQTIDEFKAACEKYHYTS 63 (285)
T ss_dssp HHHHHHHHHTTCSEEECCSSCSSC-SSCCCCCHHHHHHHHHHHHHTTCCG
T ss_pred HHHHHHHHHcCCCEEEeeCCCCCc-CcCCCCCHHHHHHHHHHHHHcCCCc
Confidence 456888999999999995421100 00 0001 01233445567789996
No 180
>2z8u_A Tata-box-binding protein; transcription, DNA-binding protein, transcription factor, transcription regulation; 1.90A {Methanococcus jannaschii}
Probab=23.23 E-value=86 Score=22.16 Aligned_cols=35 Identities=20% Similarity=0.053 Sum_probs=28.4
Q ss_pred eeeeeccceeeccCCCCcHHHHHHHHHHHHHHHHHcCC
Q 043606 3 LERITGGMKVKADRDESSPYAAMLAAQDVSQRCKERGI 40 (101)
Q Consensus 3 ~~~SsG~~gfKg~r~k~t~~Aa~~a~~~~~~~~~~~gi 40 (101)
+..++|-+...|++ ++-.++.|.+.+...+.+++.
T Consensus 153 lIF~SGKiviTGak---s~~~~~~A~~~i~~~L~~~~~ 187 (188)
T 2z8u_A 153 LIFGSGKVVITGLK---SEEDAKRALKKILDTIKEVQE 187 (188)
T ss_dssp EECTTSEEEEESCS---CHHHHHHHHHHHHHHHHHHC-
T ss_pred EEeCCCEEEEEecC---CHHHHHHHHHHHHHHHHHhcc
Confidence 45689999999999 777888888888888887764
No 181
>2a2l_A Unknown; structural genomics, PSI, protein structure initiat YORK SGX research center for structural genomics, NYSGXRC, function; 2.20A {Klebsiella pneumoniae} SCOP: d.110.9.1
Probab=23.14 E-value=1.3e+02 Score=20.00 Aligned_cols=35 Identities=26% Similarity=0.301 Sum_probs=27.0
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCcEEEEEEeecCCCc
Q 043606 19 SSPYAAMLAAQDVSQRCKERGITALHIKLRATGGNK 54 (101)
Q Consensus 19 ~t~~Aa~~a~~~~~~~~~~~gi~~v~V~lrg~~g~~ 54 (101)
-|.-.|+.+++.+.++|.+.|+ .|.|-|-..+|+.
T Consensus 12 lt~~~A~~l~~aa~~~A~~~g~-~v~IaVvD~~G~l 46 (145)
T 2a2l_A 12 ITLAAAQQMAAAVEKKATEINV-AVVFSVVDRGGNT 46 (145)
T ss_dssp ECHHHHHHHHHHHHHHHHHTTC-CCEEEEEETTSCE
T ss_pred CCHHHHHHHHHHHHHHHHHcCC-CEEEEEEECCCCE
Confidence 3667788888889999999999 4777666666664
No 182
>1wqa_A Phospho-sugar mutase; alpha-beta protein, unphosphorylated form, enzyme-metal COMP isomerase; 2.00A {Pyrococcus horikoshii}
Probab=23.12 E-value=70 Score=24.92 Aligned_cols=63 Identities=14% Similarity=0.195 Sum_probs=41.1
Q ss_pred CCcHHHHHHHHHHHHHHHHHcCCc--EEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEEEEEecCCCC
Q 043606 18 ESSPYAAMLAAQDVSQRCKERGIT--ALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPIP 86 (101)
Q Consensus 18 k~t~~Aa~~a~~~~~~~~~~~gi~--~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~~I~D~Tpip 86 (101)
.-||+-+..+++.+++.+.+.+-. .|.|---. +..+. .=.+++..+|...|+++..+ ...|.|
T Consensus 17 ~lt~~~v~~~~~a~~~~l~~~~~~~~~VvIG~D~----R~ss~-~l~~a~~~gl~~~G~~V~~~-g~~pTP 81 (455)
T 1wqa_A 17 KITPEFAMKIGMAFGTLLKREGRKKPLVVVGRDT----RVSGE-MLKEALISGLLSVGCDVIDV-GIAPTP 81 (455)
T ss_dssp TBCHHHHHHHHHHHHHHHHHTTCSSCEEEEEECS----CTTHH-HHHHHHHHHHHHTTCEEEEE-EECCHH
T ss_pred CcCHHHHHHHHHHHHHHHHhcCCCCCeEEEEeCC----CcCHH-HHHHHHHHHHHHcCCeEEEe-CCCChH
Confidence 378999999999899888765321 24333311 11111 12456778889999999988 677766
No 183
>3lw7_A Adenylate kinase related protein (ADKA-like); AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 2.30A {Sulfolobus solfataricus} PDB: 3h0k_A
Probab=23.05 E-value=66 Score=19.96 Aligned_cols=25 Identities=28% Similarity=0.474 Sum_probs=20.2
Q ss_pred CCCCChHHHHHHHHhCCCeEEEEEe
Q 043606 57 TPGPGAQSALRALARSGMKIGRIED 81 (101)
Q Consensus 57 G~G~gr~~~lr~l~~~gl~I~~I~D 81 (101)
.+|.|+.+..+.|...|+.++++.|
T Consensus 9 ~~GsGKsT~a~~L~~~g~~~i~~~~ 33 (179)
T 3lw7_A 9 MPGSGKSEFAKLLKERGAKVIVMSD 33 (179)
T ss_dssp CTTSCHHHHHHHHHHTTCEEEEHHH
T ss_pred CCCCCHHHHHHHHHHCCCcEEEHhH
Confidence 3899999999999767888776544
No 184
>3kh6_A Poly [ADP-ribose] polymerase 15; macro, PARP, BAL3, B-aggressive lymphoma protein 3, SGC, structural genomics consortium, alternative splicing; HET: APR; 2.20A {Homo sapiens} PDB: 3v2b_A*
Probab=22.85 E-value=1.2e+02 Score=21.44 Aligned_cols=36 Identities=8% Similarity=0.066 Sum_probs=22.6
Q ss_pred eeccceeeccCCCCcHHHHHHHHHHHHHHHHHc---CCcEEEEEE
Q 043606 6 ITGGMKVKADRDESSPYAAMLAAQDVSQRCKER---GITALHIKL 47 (101)
Q Consensus 6 SsG~~gfKg~r~k~t~~Aa~~a~~~~~~~~~~~---gi~~v~V~l 47 (101)
|+|..||.... ||+.+.+.+.+.+.+. .++.|.+.+
T Consensus 138 gtG~~G~p~~~------aa~i~~~~v~~fl~~~~~~~l~~V~fv~ 176 (199)
T 3kh6_A 138 GTGNAGKNPIT------VADNIIDAIVDFSSQHSTPSLKTVKVVI 176 (199)
T ss_dssp TSSTTCCCHHH------HHHHHHHHHHHHHHHCSSCSCCEEEEEE
T ss_pred ccCCCCcCHHH------HHHHHHHHHHHHHHhcCCCCCCEEEEEE
Confidence 56666666655 6666666666666553 356666666
No 185
>3uw2_A Phosphoglucomutase/phosphomannomutase family PROT; structural genomics, seattle structural genomics center for infectious disease; 1.95A {Burkholderia thailandensis}
Probab=22.78 E-value=1.2e+02 Score=24.02 Aligned_cols=63 Identities=13% Similarity=0.205 Sum_probs=42.3
Q ss_pred CCcHHHHHHHHHHHHHHHHHcCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEEEEEecCCCC
Q 043606 18 ESSPYAAMLAAQDVSQRCKERGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPIP 86 (101)
Q Consensus 18 k~t~~Aa~~a~~~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~~I~D~Tpip 86 (101)
.-|+.-+..++..+++.+.+.+-..|.|---. +..+. .=.+++..+|..+|+++..+ ..+|.|
T Consensus 40 ~lt~~~~~~ig~A~~~~l~~~~~~~VvVG~D~----R~ss~-~~~~a~a~gl~a~Gi~V~~~-g~~pTP 102 (485)
T 3uw2_A 40 TLDADVARSIGRAFGSEVRAQGGDAVVVARDG----RLSGP-ELVGALADGLRAAGVDVVDV-GMVPTP 102 (485)
T ss_dssp TBCHHHHHHHHHHHHHHHHHTTCCEEEEEECS----CTTHH-HHHHHHHHHHHHTTCEEEEE-EECCHH
T ss_pred CCCHHHHHHHHHHHHHHHHHcCCCEEEEEECC----CcCHH-HHHHHHHHHHHHCCCEEEEe-CCCChH
Confidence 56888888888888888877666665555421 11111 12345567889999999987 577766
No 186
>2nu8_B SCS-beta, succinyl-COA synthetase beta chain; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.23.4.1 d.142.1.4 PDB: 1scu_B* 2nu6_B* 1jkj_B* 2nu7_B* 2nu9_B* 2nua_B* 2scu_B* 1jll_B* 1cqj_B* 1cqi_B*
Probab=22.69 E-value=1.8e+02 Score=22.36 Aligned_cols=43 Identities=28% Similarity=0.434 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHHcCCc-EEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEEE
Q 043606 26 LAAQDVSQRCKERGIT-ALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGR 78 (101)
Q Consensus 26 ~a~~~~~~~~~~~gi~-~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~~ 78 (101)
..|+-+++.+++++++ .|.|++ . |++-+-..+.|..+|+.|..
T Consensus 327 ~vA~gii~a~~~~~~~~pivvrl--------~--G~n~~~g~~~l~~~g~~~~~ 370 (388)
T 2nu8_B 327 LIADGIIGAVAEVGVNVPVVVRL--------E--GNNAELGAKKLADSGLNIIA 370 (388)
T ss_dssp HHHHHHHHHHHHHTCCSCEEEEE--------E--STTHHHHHHHHHTTCSSEEE
T ss_pred HHHHHHHHHHHhcCCCCeEEEEe--------C--CCCHHHHHHHHHHCCCceec
Confidence 3456677777775443 566777 2 56678888999888988763
No 187
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=22.63 E-value=1.9e+02 Score=19.71 Aligned_cols=52 Identities=17% Similarity=0.160 Sum_probs=31.8
Q ss_pred HHHHHHHHHcCCcEEEEEEeecCCCc------ccCCCCC-hHHHHHHHHhCCCeEEEEE
Q 043606 29 QDVSQRCKERGITALHIKLRATGGNK------TKTPGPG-AQSALRALARSGMKIGRIE 80 (101)
Q Consensus 29 ~~~~~~~~~~gi~~v~V~lrg~~g~~------~kG~G~g-r~~~lr~l~~~gl~I~~I~ 80 (101)
+.+++.+.++|+..|++....+-+.. ...+.+. .+..-+.|...||+|..+.
T Consensus 25 ~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~ 83 (262)
T 3p6l_A 25 TEALDKTQELGLKYIEIYPGHKLGGKWGDKVFDFNLDAQTQKEIKELAASKGIKIVGTG 83 (262)
T ss_dssp HHHHHHHHHTTCCEEEECTTEECCGGGTTCEESTTCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHcCCCEEeecCCcccccccccccccccCCHHHHHHHHHHHHHcCCeEEEEe
Confidence 56788899999999999863210000 0011111 2344566778899999885
No 188
>2qw5_A Xylose isomerase-like TIM barrel; putative sugar phosphate isomerase/epimerase; 1.78A {Anabaena variabilis atcc 29413}
Probab=22.59 E-value=1.3e+02 Score=21.54 Aligned_cols=42 Identities=10% Similarity=0.110 Sum_probs=29.0
Q ss_pred HHHHHHHHcCCcEEEEEEeecCCCcccCCC--------CChHHHHHHHHhCCCe---EEEE
Q 043606 30 DVSQRCKERGITALHIKLRATGGNKTKTPG--------PGAQSALRALARSGMK---IGRI 79 (101)
Q Consensus 30 ~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G--------~gr~~~lr~l~~~gl~---I~~I 79 (101)
.+++.+.++|+..|++... .+. ...+..-+.|...||+ |.++
T Consensus 35 ~~l~~~~~~G~~~vEl~~~--------~~~~~~~~~~~~~~~~l~~~l~~~gL~~~~i~~~ 87 (335)
T 2qw5_A 35 AHIKKLQRFGYSGFEFPIA--------PGLPENYAQDLENYTNLRHYLDSEGLENVKISTN 87 (335)
T ss_dssp HHHHHHHHTTCCEEEEECC--------CCCGGGHHHHHHHHHHHHHHHHHTTCTTCEEEEE
T ss_pred HHHHHHHHhCCCEEEEecC--------CCcccccccchHHHHHHHHHHHHCCCCcceeEEE
Confidence 5788899999999999872 111 1123344557778999 8876
No 189
>3shp_A Putative acetyltransferase STHE_0691; PSI-biology, midwest center for structural genomics, MCSG; HET: SRT; 2.21A {Sphaerobacter thermophilus}
Probab=22.52 E-value=1.6e+02 Score=18.76 Aligned_cols=45 Identities=18% Similarity=0.192 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHH-HcCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEEEEE
Q 043606 25 MLAAQDVSQRCK-ERGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIE 80 (101)
Q Consensus 25 ~~a~~~~~~~~~-~~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~~I~ 80 (101)
..+...+++.+. ++|+..|.+.+. ..-..+++.+.+.|++..-+.
T Consensus 103 ~ea~~~ll~~af~~~~~~~i~~~v~-----------~~N~~s~~l~ek~GF~~~G~~ 148 (176)
T 3shp_A 103 AEALELVVPWLRDEHELLVITVEIA-----------ADEQRTLAAAEAAGLKAAVRM 148 (176)
T ss_dssp HHHHHHHHHHHHHHSCCSEEEEEEE-----------TTCHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHHhhCCeEEEEEEEc-----------CCCHHHHHHHHHCCCEEEEEe
Confidence 344455666664 589999999993 345689999999999876543
No 190
>1ghs_A 1,3-beta-glucanase; hydrolase; 2.30A {Hordeum vulgare} SCOP: c.1.8.3
Probab=22.32 E-value=71 Score=24.14 Aligned_cols=35 Identities=31% Similarity=0.431 Sum_probs=25.8
Q ss_pred HHHHHHHcCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEEE
Q 043606 31 VSQRCKERGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGR 78 (101)
Q Consensus 31 ~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~~ 78 (101)
+++.++..|++.|+++= .. ..+|++|..+|++|..
T Consensus 18 vv~llk~~~i~~vRlY~----------~d---~~vL~A~~~tgi~v~l 52 (306)
T 1ghs_A 18 VVQLYRSKGINGMRIYF----------AD---GQALSALRNSGIGLIL 52 (306)
T ss_dssp HHHHHHHHTCCEEEESS----------CC---HHHHHHTTTSCCEEEE
T ss_pred HHHHHHhcCCCEEEEcC----------CC---HHHHHHHHhcCCEEEE
Confidence 44566778999877652 22 5899999999988864
No 191
>1ro5_A Autoinducer synthesis protein LASI; alpha-beta-alpha sandwich, phosphopantetheine fold, signalin; 2.30A {Pseudomonas aeruginosa} SCOP: d.108.1.3
Probab=22.31 E-value=1.2e+02 Score=20.63 Aligned_cols=43 Identities=12% Similarity=0.213 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHHHHHHHcCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEE
Q 043606 21 PYAAMLAAQDVSQRCKERGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIG 77 (101)
Q Consensus 21 ~~Aa~~a~~~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~ 77 (101)
+..+......+.+.+.+.|++.+.+.. ...+.+.+.+.|+.+.
T Consensus 118 ~~v~~~L~~~~~~~a~~~g~~~~~~~a--------------~~~~~~fy~r~G~~~~ 160 (201)
T 1ro5_A 118 SDCTLEAMRALARYSLQNDIQTLVTVT--------------TVGVEKMMIRAGLDVS 160 (201)
T ss_dssp HHHHHHHHHHHHHHHHTTTCCEEEEEE--------------EHHHHHHHHHTTCEEE
T ss_pred hHHHHHHHHHHHHHHHHCCCCEEEEEE--------------CHHHHHHHHHcCCCeE
Confidence 334444556788999999999999888 5578898999999853
No 192
>3cny_A Inositol catabolism protein IOLE; xylose isomerase-like TIM barrel, structural genomics, joint for structural genomics, JCSG; 1.85A {Lactobacillus plantarum WCFS1}
Probab=22.27 E-value=83 Score=21.86 Aligned_cols=41 Identities=12% Similarity=0.074 Sum_probs=27.5
Q ss_pred HHHHHHHHHcCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEEEE
Q 043606 29 QDVSQRCKERGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRI 79 (101)
Q Consensus 29 ~~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~~I 79 (101)
+.+++.+.++|+..|++. + . +. ..+.+-+.|...||+|..+
T Consensus 34 ~~~l~~~~~~G~~~vEl~--~------~-~~-~~~~~~~~l~~~gl~~~~~ 74 (301)
T 3cny_A 34 QQLLSDIVVAGFQGTEVG--G------F-FP-GPEKLNYELKLRNLEIAGQ 74 (301)
T ss_dssp HHHHHHHHHHTCCEECCC--T------T-CC-CHHHHHHHHHHTTCEECEE
T ss_pred HHHHHHHHHhCCCEEEec--C------C-CC-CHHHHHHHHHHCCCeEEEE
Confidence 446677788899888876 2 1 11 3445556677788888876
No 193
>1bgv_A Glutamate dehydrogenase; oxidoreductase; HET: GLU; 1.90A {Clostridium symbiosum} SCOP: c.2.1.7 c.58.1.1 PDB: 1hrd_A 1k89_A 1aup_A 2yfh_A
Probab=22.14 E-value=68 Score=25.74 Aligned_cols=58 Identities=17% Similarity=0.196 Sum_probs=39.2
Q ss_pred CCcHHHHHHHHHHHHHHHHHcCCcEEEEEEeecCCCcccCCCC-ChHHHHHHHHhCCCeEEEEEecCCC
Q 043606 18 ESSPYAAMLAAQDVSQRCKERGITALHIKLRATGGNKTKTPGP-GAQSALRALARSGMKIGRIEDVTPI 85 (101)
Q Consensus 18 k~t~~Aa~~a~~~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~-gr~~~lr~l~~~gl~I~~I~D~Tpi 85 (101)
..|-|.+..+++.+++.. ...++...|.| .|+|. |..++ +.|.+.|.+|+-|.|.+-.
T Consensus 207 ~aTg~Gv~~~~~~~~~~~-G~~l~g~~v~V--------qG~GnVG~~~a-~~L~~~GakvVavsD~~G~ 265 (449)
T 1bgv_A 207 EATGYGSVYYVEAVMKHE-NDTLVGKTVAL--------AGFGNVAWGAA-KKLAELGAKAVTLSGPDGY 265 (449)
T ss_dssp THHHHHHHHHHHHHHHHT-TCCSTTCEEEE--------CCSSHHHHHHH-HHHHHHTCEEEEEEETTEE
T ss_pred cchhHHHHHHHHHHHHHc-cCCcCCCEEEE--------ECCCHHHHHHH-HHHHHCCCEEEEEEeCCce
Confidence 556666666655554433 23456678889 77885 55555 7788889999999996544
No 194
>1bqc_A Protein (beta-mannanase); glycosyl hydrolase, family 5, thermomonospora fusca; 1.50A {Thermobifida fusca} SCOP: c.1.8.3 PDB: 2man_A* 3man_A*
Probab=22.10 E-value=2.1e+02 Score=20.27 Aligned_cols=49 Identities=16% Similarity=0.241 Sum_probs=29.6
Q ss_pred HHHHHHHcCCcEEEEEEeecCCCcccCCCC-ChHHHHHHHHhCCCeEEEEEecC
Q 043606 31 VSQRCKERGITALHIKLRATGGNKTKTPGP-GAQSALRALARSGMKIGRIEDVT 83 (101)
Q Consensus 31 ~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~-gr~~~lr~l~~~gl~I~~I~D~T 83 (101)
.++.++++|++.|+|-+- ++..|... .. .=+.+|....+.||.|+ -|.-
T Consensus 37 ~~~~lk~~G~N~VRi~~~-~~~~w~~~-~~~~ld~~v~~a~~~Gi~Vi--ld~h 86 (302)
T 1bqc_A 37 AFADIKSHGANTVRVVLS-NGVRWSKN-GPSDVANVISLCKQNRLICM--LEVH 86 (302)
T ss_dssp HHHHHHHTTCSEEEEEEC-CSSSSCCC-CHHHHHHHHHHHHHTTCEEE--EEEG
T ss_pred HHHHHHHcCCCEEEEEcc-CCcccCCC-CHHHHHHHHHHHHHCCCEEE--EEec
Confidence 456778999999999982 10011110 00 12567777788899874 4543
No 195
>3civ_A Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1.90A {Alicyclobacillus acidocaldarius}
Probab=22.10 E-value=2.6e+02 Score=21.06 Aligned_cols=50 Identities=12% Similarity=0.104 Sum_probs=30.4
Q ss_pred HHHHHHHHHcCCcEEEEEEeecCCCccc---CCCCC----h---HHHHHHHHhCCCeEEE
Q 043606 29 QDVSQRCKERGITALHIKLRATGGNKTK---TPGPG----A---QSALRALARSGMKIGR 78 (101)
Q Consensus 29 ~~~~~~~~~~gi~~v~V~lrg~~g~~~k---G~G~g----r---~~~lr~l~~~gl~I~~ 78 (101)
...++.++++|++.|.|.+-.-.-+... +.|.+ - ..+++.++..||+|..
T Consensus 56 ~~~l~~lk~~g~N~VrL~v~~~~~~~~~~~~~~~~~~t~~~~~v~~~~~~Ak~~GL~V~l 115 (343)
T 3civ_A 56 RASMRALAEQPFNWVTLAFAGLMEHPGDPAIAYGPPVTVSDDEIASMAELAHALGLKVCL 115 (343)
T ss_dssp HHHHHHHHHSSCSEEEEEEEEEESSTTCCCCBCSTTTBCCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHcCCCEEEEEeeecCCCCCCCcccccCCCCCCHHHHHHHHHHHHHCCCEEEE
Confidence 3567778889999999886321111111 12332 2 4566667778999964
No 196
>2fp4_B Succinyl-COA ligase [GDP-forming] beta-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.23.4.1 d.142.1.4 PDB: 2fpg_B* 2fpi_B* 2fpp_B* 1euc_B* 1eud_B*
Probab=21.87 E-value=1.2e+02 Score=23.53 Aligned_cols=43 Identities=26% Similarity=0.503 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHcCCc-EEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEEEE
Q 043606 27 AAQDVSQRCKERGIT-ALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRI 79 (101)
Q Consensus 27 a~~~~~~~~~~~gi~-~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~~I 79 (101)
.|+-+++.+++++++ .|.|++. |.+-+-..+.|..+|+.|..-
T Consensus 335 vA~gii~a~~~~~~~~Pivvrl~----------G~n~~~g~~~L~~~gl~~~~~ 378 (395)
T 2fp4_B 335 IANGITKACRELELKVPLVVRLE----------GTNVHEAQNILTNSGLPITSA 378 (395)
T ss_dssp HHHHHHHHHHHHTCCSCEEEEEE----------ETTHHHHHHHHHHTCSCCEEC
T ss_pred HHHHHHHHHHhcCCCCeEEEEcC----------CCCHHHHHHHHHHCCCceEeC
Confidence 456677777775543 5667772 456777889998889877643
No 197
>3g8q_A Predicted RNA-binding protein, contains thump domain; cytidine deaminase, ferredoxin-like domain; 2.40A {Methanopyrus kandleri}
Probab=21.72 E-value=2.6e+02 Score=21.23 Aligned_cols=46 Identities=26% Similarity=0.357 Sum_probs=34.3
Q ss_pred HHHHHHHcCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEEEEEecCCCCCC
Q 043606 31 VSQRCKERGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPIPTD 88 (101)
Q Consensus 31 ~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~~I~D~TpiphN 88 (101)
.+..+.+.||+.|.+-.. +-|.| ...|+.+|+++..+.+-.+.-+.
T Consensus 70 CAgAII~AGIkRVVYGa~--------~~G~G----~e~LreAGIEV~~L~~eE~~~~~ 115 (278)
T 3g8q_A 70 CARELAEAGVAGVVYLGR--------GRGLG----PYYLARSGVEVVEVHPDEPLGYD 115 (278)
T ss_dssp HHHHHHTTTCCEEEEEEC--------SSCCH----HHHHHTTTCEEEEEEECSCCCCC
T ss_pred HHHHHHHhCCCEEEEEec--------CCChh----HHHHHHCCCEEEEecChhhcCCC
Confidence 455567789999988873 33333 36799999999999988877664
No 198
>3mw9_A GDH 1, glutamate dehydrogenase 1; allostery, inhibition, oxidoreducta; HET: GLU GTP NAD; 2.40A {Bos taurus} SCOP: c.2.1.7 c.58.1.1 PDB: 3mvo_A* 3mvq_A* 3qmu_A* 3etd_A* 3ete_A* 3etg_A* 1l1f_A 1nr1_A 1nr7_A 1nqt_A 1hwx_A* 1hwy_A* 1hwz_A*
Probab=21.58 E-value=1.1e+02 Score=25.07 Aligned_cols=62 Identities=11% Similarity=0.047 Sum_probs=42.2
Q ss_pred CCcHHHHHHHHHHHHH---HHHHcCC----cEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEEEEEecCCCCC
Q 043606 18 ESSPYAAMLAAQDVSQ---RCKERGI----TALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPIPT 87 (101)
Q Consensus 18 k~t~~Aa~~a~~~~~~---~~~~~gi----~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~~I~D~Tpiph 87 (101)
..|-|....+++.+++ .+..+|+ +-..|.| .|+|-=-..+.+.|.+.|-+|+.|.|.+-.=|
T Consensus 213 eATg~GV~~~~~~~l~~~~~~~~~G~~~~l~g~tVaV--------QG~GNVG~~aa~~L~e~GakVVavsDs~G~iy 281 (501)
T 3mw9_A 213 SATGRGVFHGIENFINEASYMSILGMTPGFGDKTFVV--------QGFGNVGLHSMRYLHRFGAKCITVGESDGSIW 281 (501)
T ss_dssp THHHHHHHHHHHHHHTCHHHHHHTTCCSSSTTCEEEE--------ECCSHHHHHHHHHHHHTTCEEEEEECSSCEEE
T ss_pred CchHHHHHHHHHHHHhhhHHHHHcCCCCCcCCCEEEE--------ECCCHHHHHHHHHHHHCCCEEEEEEcCCceEE
Confidence 5677777777665553 2345664 5678899 77885333455668889999999999765433
No 199
>2ooa_A E3 ubiquitin-protein ligase CBL-B; alpha-helical domain; 1.56A {Homo sapiens} PDB: 2oob_A 2jnh_A 2do6_A
Probab=21.47 E-value=45 Score=19.36 Aligned_cols=17 Identities=24% Similarity=0.178 Sum_probs=12.5
Q ss_pred CCChHHHHHHHHhCCCe
Q 043606 59 GPGAQSALRALARSGMK 75 (101)
Q Consensus 59 G~gr~~~lr~l~~~gl~ 75 (101)
|.-|+.|+++|..++-+
T Consensus 22 GFsr~~ai~AL~~a~nn 38 (52)
T 2ooa_A 22 GYAFEEVKRALEIAQNN 38 (52)
T ss_dssp TCCHHHHHHHHHHTTTC
T ss_pred CCCHHHHHHHHHHhCCC
Confidence 33389999999887543
No 200
>2g3q_A Protein YBL047C; endocytosis, solution structure, UBA domain, endocytosis/signaling protein complex; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1
Probab=21.11 E-value=80 Score=16.47 Aligned_cols=12 Identities=25% Similarity=0.343 Sum_probs=8.9
Q ss_pred hHHHHHHHHhCC
Q 043606 62 AQSALRALARSG 73 (101)
Q Consensus 62 r~~~lr~l~~~g 73 (101)
++.|+++|..++
T Consensus 18 ~~~a~~AL~~~~ 29 (43)
T 2g3q_A 18 EEEAHNALEKCN 29 (43)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHhC
Confidence 677888887664
No 201
>3ld2_A SMU.2055, putative acetyltransferase; HET: COA; 2.50A {Streptococcus mutans}
Probab=20.98 E-value=1.6e+02 Score=18.45 Aligned_cols=49 Identities=14% Similarity=0.077 Sum_probs=35.4
Q ss_pred CcHHHHHHHHHHHHHHHHHcCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEEEEE
Q 043606 19 SSPYAAMLAAQDVSQRCKERGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIE 80 (101)
Q Consensus 19 ~t~~Aa~~a~~~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~~I~ 80 (101)
+.-++..+. +.+.+.+.+. +..|.+.+ ......+++...+.|++.....
T Consensus 123 g~Gig~~ll-~~~~~~a~~~-~~~i~l~v-----------~~~N~~a~~~y~k~GF~~~~~~ 171 (197)
T 3ld2_A 123 RKGIGRALV-QIFLNEVKSD-YQKVLIHV-----------LSSNQEAVLFYKKLGFDLEARL 171 (197)
T ss_dssp TSSHHHHHH-HHHHHHHTTT-CSEEEEEE-----------ETTCHHHHHHHHHTTCEEEEEE
T ss_pred CCCHHHHHH-HHHHHHHHHH-HHeEEEEe-----------eCCCHHHHHHHHHCCCEEeeec
Confidence 334554444 5678888888 99999888 2334678898999999988753
No 202
>3vup_A Beta-1,4-mannanase; TIM barrel, digestive fluid, HYD; 1.05A {Aplysia kurodai}
Probab=20.89 E-value=2e+02 Score=19.47 Aligned_cols=21 Identities=5% Similarity=0.153 Sum_probs=17.7
Q ss_pred HHHHHHHHHHHcCCcEEEEEE
Q 043606 27 AAQDVSQRCKERGITALHIKL 47 (101)
Q Consensus 27 a~~~~~~~~~~~gi~~v~V~l 47 (101)
..+..++.++++|++.|+|-+
T Consensus 43 ~~~~~l~~~k~~G~N~vRv~~ 63 (351)
T 3vup_A 43 RIEPEFKKLHDAGGNSMRLWI 63 (351)
T ss_dssp HHHHHHHHHHHTTCCEEEEEE
T ss_pred HHHHHHHHHHHcCCcEEEECc
Confidence 346678899999999999977
No 203
>3fpw_A HBPS, extracellular HAEM-binding protein; heme binding protein; 1.60A {Streptomyces reticuli} PDB: 3fpv_A
Probab=20.89 E-value=1.4e+02 Score=21.19 Aligned_cols=35 Identities=20% Similarity=0.226 Sum_probs=27.9
Q ss_pred CCcHHHHHHHHHHHHHHHHHcCCcEEEEEEeecCCC
Q 043606 18 ESSPYAAMLAAQDVSQRCKERGITALHIKLRATGGN 53 (101)
Q Consensus 18 k~t~~Aa~~a~~~~~~~~~~~gi~~v~V~lrg~~g~ 53 (101)
.-|.-.|+.+++.+.++|.++|+ .|.|-|-..+|+
T Consensus 64 ~ltl~~A~~l~~aA~~~A~~~g~-pV~IaVvD~~G~ 98 (192)
T 3fpw_A 64 HLTLEAATKAARAAVEAAEKDGR-HVSVAVVDRNGN 98 (192)
T ss_dssp CCCHHHHHHHHHHHHHHHHHTTC-CCEEEEEETTSC
T ss_pred CCCHHHHHHHHHHHHHHHHhcCC-CEEEEEEeCCCC
Confidence 45777889999999999999999 577766666665
No 204
>3fnc_A Protein LIN0611, putative acetyltransferase; GNAT, RIMI, structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 1.75A {Listeria innocua} SCOP: d.108.1.0
Probab=20.88 E-value=1.4e+02 Score=17.66 Aligned_cols=48 Identities=8% Similarity=-0.004 Sum_probs=32.9
Q ss_pred cHHHHHHHHHHHHHHHHHcCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEEEEEe
Q 043606 20 SPYAAMLAAQDVSQRCKERGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIED 81 (101)
Q Consensus 20 t~~Aa~~a~~~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~~I~D 81 (101)
.=++..+. +.+.+.+. |+..+.+.+ ......+++...+.|++.....+
T Consensus 99 ~Gig~~ll-~~~~~~~~--~~~~i~l~v-----------~~~n~~a~~~y~k~Gf~~~~~~~ 146 (163)
T 3fnc_A 99 RGLGTELL-EVGMTLFH--VPLPMFVNV-----------EKGNETAIHFYKAKGFVQVEEFT 146 (163)
T ss_dssp SSHHHHHH-HHHHHHTT--CCSSEEEEE-----------ETTCHHHHHHHHHTTCEEEEEEE
T ss_pred CCHHHHHH-HHHHHHhc--cCCEEEEEE-----------eCCCHHHHHHHHHcCCEEEEEEE
Confidence 33444433 45666665 889998888 33456788999999999886543
No 205
>2m1z_A LMO0427 protein; homolog PTS system IIB component, transferase; NMR {Listeria monocytogenes egd-e}
Probab=20.75 E-value=1.3e+02 Score=19.31 Aligned_cols=26 Identities=19% Similarity=0.354 Sum_probs=20.6
Q ss_pred HHHHHHHHHHHHHHcCCcEEEEEEeec
Q 043606 24 AMLAAQDVSQRCKERGITALHIKLRAT 50 (101)
Q Consensus 24 a~~a~~~~~~~~~~~gi~~v~V~lrg~ 50 (101)
.+.|++.+-+.++++|+. +.|..+|.
T Consensus 18 TymAAeaLekaA~~~G~~-ikVEtqgs 43 (106)
T 2m1z_A 18 TYMAAQALKKGAKKMGNL-IKVETQGA 43 (106)
T ss_dssp HHHHHHHHHHHHHHHTCE-EEEEEEET
T ss_pred HHHHHHHHHHHHHHCCCE-EEEEEecC
Confidence 456778888888999995 88888763
No 206
>3ouv_A Serine/threonine protein kinase; protein-ligand interaction, transferase; 2.00A {Mycobacterium tuberculosis H37RA}
Probab=20.72 E-value=1.1e+02 Score=17.21 Aligned_cols=24 Identities=13% Similarity=0.097 Sum_probs=19.5
Q ss_pred CCCChHHHHHHHHhCCCeEEEEEe
Q 043606 58 PGPGAQSALRALARSGMKIGRIED 81 (101)
Q Consensus 58 ~G~gr~~~lr~l~~~gl~I~~I~D 81 (101)
.|.-.+.|...|...||++..+.+
T Consensus 14 ~G~~~~~A~~~L~~~Gl~~~~~~~ 37 (71)
T 3ouv_A 14 AGQTVDVAQKNMNVYGFTKFSQAS 37 (71)
T ss_dssp TTCBHHHHHHHHHHTTCCCEEEEE
T ss_pred CCCCHHHHHHHHHHCCCeEEEEEE
Confidence 577788899999999998876654
No 207
>3f5b_A Aminoglycoside N(6')acetyltransferase; APC60744, legionella pneumophila subsp. pneumophila, structural genomics, PSI-2; HET: MSE; 2.00A {Legionella pneumophila subsp}
Probab=20.48 E-value=1.6e+02 Score=17.98 Aligned_cols=50 Identities=8% Similarity=0.015 Sum_probs=35.1
Q ss_pred CCcHHHHHHHHHHHHHHHHHcCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEEEEE
Q 043606 18 ESSPYAAMLAAQDVSQRCKERGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIE 80 (101)
Q Consensus 18 k~t~~Aa~~a~~~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~~I~ 80 (101)
++.=++.++. +.+.+.+. .|+..|.+.+ ......+++...+.|+......
T Consensus 107 rg~Gig~~ll-~~~~~~~~-~~~~~i~l~v-----------~~~N~~a~~~y~k~GF~~~~~~ 156 (182)
T 3f5b_A 107 IGKGLSVQMI-HEFILSQF-SDTKIVLINP-----------EISNERAVHVYKKAGFEIIGEF 156 (182)
T ss_dssp CCHHHHHHHH-HHHHHHHC-TTCSEEEECC-----------BTTCHHHHHHHHHHTCEEEEEE
T ss_pred cCCchHHHHH-HHHHHHhh-CCCCEEEEec-----------CcCCHHHHHHHHHCCCEEEeEE
Confidence 4445555544 44666673 4899888877 4455689999999999888765
No 208
>2kyr_A Fructose-like phosphotransferase enzyme IIB compo; ALP protein, structural genomics, PSI-2; NMR {Escherichia coli}
Probab=20.22 E-value=1.4e+02 Score=19.42 Aligned_cols=27 Identities=22% Similarity=0.384 Sum_probs=21.3
Q ss_pred HHHHHHHHHHHHHHHcCCcEEEEEEeec
Q 043606 23 AAMLAAQDVSQRCKERGITALHIKLRAT 50 (101)
Q Consensus 23 Aa~~a~~~~~~~~~~~gi~~v~V~lrg~ 50 (101)
..+.|+|.+-+.++++|+. +.|..+|.
T Consensus 20 HTyMAAeaL~~aA~~~G~~-ikVEtqGs 46 (111)
T 2kyr_A 20 HTFMAAQALEEAAVEAGYE-VKIETQGA 46 (111)
T ss_dssp HHHHHHHHHHHHHHHTSSE-EEEEEEET
T ss_pred HHHHHHHHHHHHHHHCCCe-EEEEecCC
Confidence 3556788888889999987 88888763
No 209
>3em5_A Beta-1,3-glucanase; glycoprotein, rossmann fold, (beta-alpha)8-TIM-barrel, glyco hydrolase, allergen; HET: NAG FUC MAN; 2.50A {Hevea brasiliensis} SCOP: c.1.8.3 PDB: 3f55_A*
Probab=20.03 E-value=66 Score=24.59 Aligned_cols=35 Identities=31% Similarity=0.411 Sum_probs=25.6
Q ss_pred HHHHHHHHcCCcEEEEEEeecCCCcccCCCCChHHHHHHHHhCCCeEE
Q 043606 30 DVSQRCKERGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIG 77 (101)
Q Consensus 30 ~~~~~~~~~gi~~v~V~lrg~~g~~~kG~G~gr~~~lr~l~~~gl~I~ 77 (101)
.+++.++..||+.|+|+ ++- ..+|++|..+|++|.
T Consensus 18 ~vv~llks~gi~~VRlY------------daD-~~vL~Al~~sgi~v~ 52 (316)
T 3em5_A 18 EVIALYKKSNITRMRIY------------DPN-QAVLEALRGSNIELI 52 (316)
T ss_dssp HHHHHHHHTTCCEEECS------------SCC-HHHHHHHTTCCCEEE
T ss_pred HHHHHHHHcCCCEEEEe------------cCC-HHHHHHhhcCCceEE
Confidence 45667788999876665 222 369999999999875
Done!